<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-01-15 12:54:57"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C06HBa0117B06-OI86t/GenomeThreader_SGN_U_tomato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C06HBa0117B06-OI86t/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0117B06-OI86t/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U327900" ref_strand="+" ref_description="SGN-U327900        Tomato 200607 #1 [3 ESTs aligned] arabidopsis/peptide: | Symbol: None | far-red impaired responsive family protein / FAR1 family protein, weak similarity to far-red impaired response protein (Arabidopsis thaliana) GI:5764395; contains Pfam profile PF03101: FAR1 family | chr3:21989938-21991521 REVERSE | Aliases: T16L24.20(evalue: 6e-73, score=270) genbank/nr: gi|6996283|emb|CAB75444.1| putative protein [Arabidopsis thaliana] (evalue: 5e-71, score=270)">
      <seq>tgaaaatgtgattggaggaagttccagtgaggaggcacttcaccaggtgcatgatgtcaaggtggatgaagaccttcctgaaagggaggaccttatattagaagaagcacaatctctcgataattcaacttcagatgaacctttcgttggcctggagtttgaatctgaagccgcagcacatgcattttataatgcatatgcaacaagggtgggttttatcatccgggttagtaagctttcgcgatctaggcgtgatggctccgccattggtcgagcactagtttgcaacaaggagggttttagaatgcctgataagcgggaaaagattgtgcgacagagagcagaaacaagggttggttgcagagcaatgatattagttagaaaaataagctctgggaaatgggttgtcacaaaatttgtcaaggagcactctcatccattgtgcccaggcaaaggtcgcagggacttgatctatgatcaatacccgaacgagcatgacaaaatccgggaactatctcaacaactggcagctgagaaaaagcgatctgctacatataagaggcatttggaaatgattttcgagcacattgaggagcacaatcaatctctgtttaagaagatccaagatattgtacacaatgttagggagttggagtccaaagatgaacatcatcatagatagttttagcttaatatgcctttgttgatattagtgtagaacctaagttcagtaaagatcataatgattactgtcttgacttgcctttttttccctctccctgttatccttttcattttttttgggaagggtatgaaaaatttaaaacccaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0117B06-OI86t/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0117B06.1" temp_strand="+" temp_description="C06HBa0117B06.1  AC211048.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0117B06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="4514" stop="124727"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="4814" g_stop="5300" g_length="487"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="487" r_length="487" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="5301" i_stop="7130" i_length="1830">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.977" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="7131" g_stop="7474" g_length="344"/>
          <reference_exon_boundary r_type="cDNA" r_start="488" r_stop="831" r_length="344" r_score="0.983"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="7475" i_stop="8379" i_length="905">
            <donor d_prob="0.000" d_score="0.92"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="8380" g_stop="8411" g_length="32"/>
          <reference_exon_boundary r_type="cDNA" r_start="832" r_stop="863" r_length="32" r_score="0.656"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0117B06.1" gen_strand="+" ref_id="SGN-U327900" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>863</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0117B06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U327900" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="4814" e_stop="5300"/>
          <exon e_start="7131" e_stop="7474"/>
          <exon e_start="8380" e_stop="8411"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAAAATGTGATTGGAGGAAGTTCCAGTGAGGAGGCACTTCACCAGGTGCATGATGTCAAGGTGGATGAAGACCTTCCTGAAAGGGAGGACCTTATATTAGAAGAAGCACAATCTCTCGATAATTCAACTTCAGATGAACCTTTCGTTGGCCTGGAGTTTGAATCTGAAGCCGCAGCACATGCATTTTATAATGCATATGCAACAAGGGTGGGTTTTATCATCCGGGTTAGTAAGCTTTCGCGATCTAGGCGTGATGGCTCCGCCATTGGTCGAGCACTAGTTTGCAACAAGGAGGGTTTTAGAATGCCTGATAAGCGGGAAAAGATTGTGCGACAGAGAGCAGAAACAAGGGTTGGTTGCAGAGCAATGATATTAGTTAGAAAAATAAGCTCTGGGAAATGGGTTGTCACAAAATTTGTCAAGGAGCACTCTCATCCATTGTGCCCAGGCAAAGGTCGCAGGGACTTGATCTATGATCAATACCCGGTTAGTTTTCTGCCTTATCTTTATTAAGGTCTTGTAACATAAGGTATCCTACTTTCTTTTTGTACATACATGTCATTTAATTTTCTAGACTATATCATCCTATTATTGCCTTTTGCCTTTGATTAAACGTCTTTTGTTTGTACCATTTGATGGAATCTGAAATTTTAAAGGAGGCAACAACATGTATGTTATAACTTATATGTACTAGTTTCTGGATACCGGCTTTGCATGTGTACCTCATTTAATTAGTACATGATTTTTAAAACTCACATAAATCTTAATAATCAATGTGTTTTAGTTATCAAATAAAATTTATAGAGAAATGGAAGTTTATGAAAATGATGAATATTGAACTCATTTAGCTAGCTCAATAAAGGAAGAAATCTTGTGCCACGGAGGTCCTCAAATGCCTTATTGCAAAATAGAGACACATATGGGAGCAAAGTTTCTTCTAAACTGAAATCTTAGTTTATCCCAAAACCTAATTAGAGAACATGTTTAGGACTACCAAATGCCGAATATAAATATTATGAAAATTGTAGTTAATAATGCTATTGTCGAGTTACTTATTTTGCTATTAAAAGACAAAAAGCAAGGCATGTTGGCAAATGTTTTTAAGTCATTGCCGCTTAATAAATTTTATTTCTATAACTTAAATTTAAAAGCCAAATGACGATATGAAACAGAGTGAACATGGCTGCTTCTCACTGAAATCACTTAAATTTATAAGTGAATGATTTCATGGATATATCAAGTGGGTGTCAACATTATATTCCACCTTCTTACTTTTTCCCTCACAAAGGCAACACCAGCTAAACATCATCCTTCTCAAACTTTCTACTGTTAGTATGCTGTGGCAAAATGGTATAAAGGATAGTTCCATTTTGGTATGAGGAACTTATGGTTATGAGAACAAAATGTTGTAGTAACCAAAAAAGGAACAACAGAATTTATATCTTACCTCTATAAGTGCAACCTCTATTTTGCTGGGGGGAGAGGCGTGTGTGCAAATATTTGCCCATTTTGCTTTCTTTTATAGCACCATTATCCTGCTGTTCTCTCAGAGCTACCATTTAAGGTGGAGTGCTAATTGAATTTTAAGAGAAATTCGACAAGAGAAAAATCATTACGAAGGAAAAGGGAGAAATTCGGCAAGATATATCCTTCTATGTTGTTTGGACTCACTATTCCTTGATTGCAAATACTAATAAATGGTAGTCCATCTTTCCATTTTGGGAGTTCTGTAAAAGTGATGGCGTGTTACTTATACAAATTTATTCAGTTAGCACTCTGTTATGTGGATAAAAGATGATATAAAGTGTTTTCATTTGTGTCTTTGGACAGGTTATATATTCGTGAGTCACCTTACCCTTCAATTTCCGTCATCATTCATATTGATATTACATGAACCTAGAAATGTAATCCTTTTTGGCTTCTTTGGTGTGCGAGAAGAAGTGTTTATAGAAGTCATGACCGTTGTGCTTTTGGTTGTAATATGCACTTAAAATACTGATCAAGTCGAAGTATCAAATTCAAATTTGAAAACGTTAACTCTAAATACTACAAATAGTTGGAGATGGTAAATCTGTCATAAAAGTACATATTATTGTCATCGCGAGGACATTTAAACTAGAAACTAGATCATATAAACTGGAGTGGGGGAAATTAGTCGATTTAACAATTGCCACTTGTAGCAGTAGTTTTAAAATTACTGATTTTCTCTGTCAATGCATCTAAAACTGAGTATCTTATGCCTAGTTCATCTTCAAAGAACTAACTTTACCCGATTTCAGCTAACACTTGTTTTGGTTTCTCAACTTCTTCCTGCAGAACGAGCATGACAAAATCCGGGAACTATCTCAACAACTGGCAGCTGAGAAAAAGCGATCTGCTACATATAAGAGGCATTTGGAAATGATTTTCGAGCACATTGAGGAGCACAATCAATCTCTGTCTAAGAAGATCCAAGATATTGTACACAATGTTAGGGAGTTGGAGTCCAGAGATGAACATCATCATAGATAGTTTTAGCTTAATATGCCTTTGTTGATATTAGTGTAGAACCTAAGTTCAGTAAAGATCATAATGATTACTGTCTTGACTTGCCTTTTTTTCCCTCTCCCTGTTATCCTTTTCATTTTCTTTGGGAAGAGTATGAAAAATTTAAAACCAGACCATATCTTGTGTTCACCTTTTTTTTCCTTTTTGGGTAGAATTGTGGAAACGTAGGAAAAATTGGCACAGAATGTCTACTTCTGGTGCTTCCATTATAACATTCTTTTGGAAGGTTGGAGTCACCTTTTTTCATTTTTGTAAAATCTCAAGTCCATTTCTTTTAGATAATAGTTAACTGTATTTCAGTTTTCTTTGGGACGCTTCAAGGATTACTTTGAGACATATTCTAGAAGGTCTGCGTACTCTCTACCTCTAGGCTCCATTTGTTGAATTACGCCAAGTATGTCGCTGTTGGATTTTCGTTTGTGCCTTGCATCAGTTCTAACTTTCTTGACCATCTTGAAGTGCTTATGGCATAGTTACATTTGACAGTCCTATAACTGGTATCTGCTGACTCGATTATCCCGGATCAAGAATTTCTTCACGCAAAGTTTGAACATAAGATTTTGGTGAAGGAATCTCATCCATTTCACCATATTGAAACTAGAGTTGGTAATTGATGGAACAGGCAACCATTGGTGGTTTCAATGCATTAGCTGTAATTGCTAATACATATGGACTATAGTATGTGTACAATAGTTAAACGTAACAAAATATTACGGTTGTTTAACATAAGGGATGAAGGTATAGTAAATTCGATCATATACATATTAAAAATTACTAATTATTAAAAAATCGAACTGCTGTGCTAGTAATTTGCATGATTAAGAAGAACCTTAATCATTAACATAATTCCAAAATTAATTAGTCTCTAGCCAAACTTTTAAAATCAATTTTTTTCATAGGTCCTTTAAAGAAAAATAAAATGCTTCTGTGAGAATCAAATTGTGTTTGACTAATCAATTTAAAAAGTACTTTTGATCAACAATTAATATTTGATCGATTTTCTCATTGTACTTTTGAGAAAAGAAAAACTTTATAAAATTTTAAAAAATA</genome_strand>
        <mrna_strand>TGAAAATGTGATTGGAGGAAGTTCCAGTGAGGAGGCACTTCACCAGGTGCATGATGTCAAGGTGGATGAAGACCTTCCTGAAAGGGAGGACCTTATATTAGAAGAAGCACAATCTCTCGATAATTCAACTTCAGATGAACCTTTCGTTGGCCTGGAGTTTGAATCTGAAGCCGCAGCACATGCATTTTATAATGCATATGCAACAAGGGTGGGTTTTATCATCCGGGTTAGTAAGCTTTCGCGATCTAGGCGTGATGGCTCCGCCATTGGTCGAGCACTAGTTTGCAACAAGGAGGGTTTTAGAATGCCTGATAAGCGGGAAAAGATTGTGCGACAGAGAGCAGAAACAAGGGTTGGTTGCAGAGCAATGATATTAGTTAGAAAAATAAGCTCTGGGAAATGGGTTGTCACAAAATTTGTCAAGGAGCACTCTCATCCATTGTGCCCAGGCAAAGGTCGCAGGGACTTGATCTATGATCAATACCCG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGAGCATGACAAAATCCGGGAACTATCTCAACAACTGGCAGCTGAGAAAAAGCGATCTGCTACATATAAGAGGCATTTGGAAATGATTTTCGAGCACATTGAGGAGCACAATCAATCTCTGTTTAAGAAGATCCAAGATATTGTACACAATGTTAGGGAGTTGGAGTCCAAAGATGAACATCATCATAGATAGTTTTAGCTTAATATGCCTTTGTTGATATTAGTGTAGAACCTAAGTTCAGTAAAGATCATAATGATTACTGTCTTGACTTGCCTTTTTTTCCCTCTCCCTGTTATCCTTTTCATTTTTTTTGGGAAGGGTATGAAAAATTTAAAACCCAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0117B06-OI86t/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U312536" ref_strand="+" ref_description="SGN-U312536        Tomato 200607 #1 [81 ESTs aligned] arabidopsis/peptide: | Symbol: None | 60S ribosomal protein L9 (RPL90B), similar to RIBOSOMAL PROTEIN L9 GB:P49209 from (Arabidopsis thaliana) | chr1:12010886-12012504 FORWARD | Aliases: T9L6.2, T9L6_2(evalue: 3e-93, score=338) genbank/nr: gi|78191472|gb|ABB29957.1| unknown [Solanum tuberosum] (evalue: 2e-103, score=378)">
      <seq>gggcgattggcggccaatcggccgaattgatcgctgctagggttttagcgatcaccatattcacacacacagtcggagagagagtgtgagaggaatttagagaagatgaagacaattctgtcatcagaaaccatggatatccccgacggcatcaccatcaaggtgaaggcgaagcaaatcgaagttgaaggaccaaggggaaagcttgtgagaaacttcaagcatctcaatctcgatttccagctgatcaaggacgaggaaactggacagaagaagctgaaggttgatgcctggtttggatctcgaaaggctactgcttctatccgtaccgctcttagccatgtcaataatctcatcgttggtgttaccaagggatacagatacaagatgcgttttgtatatgctcactttccgatcaatgcctccatcaccggaggtaacaagtccattgagatccgtaacttccttggcgagaaaaaggttaggaaagttgacatgcttgatggagtaacagttgttcgatctgagaaggttaaggacgagcttgtgttggatggaaatgacattgagcttgtttctcgctctgctgccctcattaaccaaaaatgccatgtgaagaacaaggatatccgaaagtttcttgatggtatctatgtcagcgagaagggtaaaattgtcgaagaagaatgagtattttagaagtaggcatgttggtgatggaccatatcccaaatcctcgttttaccatttctttcaagtttttttggagaccatatattacagacttgtttgaatttcagttttctagttcttgtgttgaaattttgttgacaaagtggccttggtggttctttcaattacaccaaatgtttctgttctcgttatcttttgagtgaaaattgttaaatcccaagttgcaactatgttatatatatcatagcttttgagttttgcataaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0117B06-OI86t/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0117B06.1" temp_strand="+" temp_description="C06HBa0117B06.1  AC211048.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0117B06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="11415" stop="13883"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11726" g_stop="12165" g_length="440"/>
          <reference_exon_boundary r_type="cDNA" r_start="41" r_stop="480" r_length="440" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="12166" i_stop="12999" i_length="834">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="13000" g_stop="13122" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="481" r_stop="603" r_length="123" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="13123" i_stop="13228" i_length="106">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="13229" g_stop="13583" g_length="355"/>
          <reference_exon_boundary r_type="cDNA" r_start="604" r_stop="958" r_length="355" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="959" polyA_stop="975"/>
      <MATCH_line gen_id="C06HBa0117B06.1" gen_strand="+" ref_id="SGN-U312536" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>918</cumulative_length_of_scored_exons>
        <coverage percentage="0.942" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0117B06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U312536" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11726" e_stop="12165"/>
          <exon e_start="13000" e_stop="13122"/>
          <exon e_start="13229" e_stop="13583"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGTTTTAGCGATCACCATATTCACACACACAGTCGGAGAGAGAGTGTGAGAGGAATTTAGAGAAGATGAAGACAATTCTGTCATCAGAAACCATGGATATCCCCGACGGCATCACCATCAAGGTGAAGGCGAAGCAAATCGAAGTTGAAGGACCAAGGGGAAAGCTTGTGAGAAACTTCAAGCATCTCAATCTCGATTTCCAGCTGATCAAGGACGAGGAAACTGGACAGAAGAAGCTGAAGGTTGATGCCTGGTTTGGATCTCGAAAGGCTACTGCTTCTATCCGTACCGCTCTTAGCCATGTCAATAATCTCATCGTTGGTGTTACCAAGGGATACAGATACAAGATGCGTTTTGTATATGCTCACTTTCCGATCAATGCCTCCATCACCGGAGGTAACAAGTCCATTGAGATCCGTAACTTCCTTGGCGAGAAAAAGGTAATTTTTTTTTCAAAAGTTAATTTTCTTTGTTTCCTGAAGCTTTTTGTATGAACGAAATGTATGCATTAGTTTGTTAACATGATCGCTGACTACGTGATCTGGATTTATGCTTCTTAATTATAGTTCTTATTCTGTGGATTTTTGTGTTTTGAATGCTCTGATTCAGTCTCTGTATAAACCCATTGGATACTAATTTGAGCGAAAAGGGAGGCCCATTACACAGAAATGCATTAGTTTTATGTAAATATAAGATTTAATTTGTGATCCTTATTGCGTAGTTTTTTGTTGTAATTGTCCTTTTGTATATTCAAATGTGAAATTGATTGGCTTTGTAATTAGGAAGATAAAGTTGAAAAACTGTACCTGTCCAGAAAGGAAAGTCAAGATTCTATTGAACTTGTGTTTGAATTCCTATATCAATTCCATAGTTCTTTTTGAATGACTTCAATGATATGTTTTATTTGTTAAAAGTTATTAAAAGTTGTTCGAAAAAACTATCTTTGCCATTAATAATGCTGCTATGGAGATTAGTTGTATTCAGCTAGGTTTAGAACTTTGAGATGTTTGACTGAAATAGGTAGCAGCTAGTGTAATTGTTATAGATGCTGTAGAAATTGGTTATTTGATAAAGAAATGTTATGTCGTAGCTTATTTTATATCTATTAAGGAATCATTTCTGGCGTAGTGAATAAAGCCAGCTTGAGTCGTATACTACTTGGCTAGGTTTTGTCCTACGTATGGTAATGTCATATGTACTCTTCACTGCTCATTATCTATCCCATTTTGCTGTAGTAGTACCTGGAGATTTAACTTGTTTTATGGCTGTATCAGGTTAGGAAAGTTGACATGCTTGATGGAGTAACAGTTGTTCGATCTGAGAAGGTTAAGGACGAGCTTGTGTTGGATGGAAATGACATTGAGCTTGTTTCTCGCTCTGCTGCCCTCATTAACCAAGTAATCTCTATGTTCTATCTCCTAACATTGAACATTTAAACTTTGCGATACTATCAATTTGGATTGGCATCACTTAAATTTTTTTATTTTTTATCTTGTTGTACAGAAATGCCATGTGAAGAACAAGGATATCCGAAAGTTTCTTGATGGTATCTATGTCAGCGAGAAGGGTAAAATTGTCGAAGAAGAATGAGTATTTTAGAAGTAGGCATGTTGGTGATGGACCATATCCCAAATCCTCGTTTTACCATTTCTTTCAAGTTTTTTTGGAGACCATATATTACAGACTTGTTTGAATTTCAGTTTTCTAGTTCTTGTGTTGAAATTTTGTTGACAAAGTGGCCTTGGTGGTTCTTTCAATTACACCAAATGTTTCTGTTCTCGTTATCTTTTGAGTGAAAATTGTTAAATCCCAAGTTGCAACTATGTTATATATATCATAGCTTTTGAGTTTTGCATAA</genome_strand>
        <mrna_strand>GGTTTTAGCGATCACCATATTCACACACACAGTCGGAGAGAGAGTGTGAGAGGAATTTAGAGAAGATGAAGACAATTCTGTCATCAGAAACCATGGATATCCCCGACGGCATCACCATCAAGGTGAAGGCGAAGCAAATCGAAGTTGAAGGACCAAGGGGAAAGCTTGTGAGAAACTTCAAGCATCTCAATCTCGATTTCCAGCTGATCAAGGACGAGGAAACTGGACAGAAGAAGCTGAAGGTTGATGCCTGGTTTGGATCTCGAAAGGCTACTGCTTCTATCCGTACCGCTCTTAGCCATGTCAATAATCTCATCGTTGGTGTTACCAAGGGATACAGATACAAGATGCGTTTTGTATATGCTCACTTTCCGATCAATGCCTCCATCACCGGAGGTAACAAGTCCATTGAGATCCGTAACTTCCTTGGCGAGAAAAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTAGGAAAGTTGACATGCTTGATGGAGTAACAGTTGTTCGATCTGAGAAGGTTAAGGACGAGCTTGTGTTGGATGGAAATGACATTGAGCTTGTTTCTCGCTCTGCTGCCCTCATTAACCAA..........................................................................................................AAATGCCATGTGAAGAACAAGGATATCCGAAAGTTTCTTGATGGTATCTATGTCAGCGAGAAGGGTAAAATTGTCGAAGAAGAATGAGTATTTTAGAAGTAGGCATGTTGGTGATGGACCATATCCCAAATCCTCGTTTTACCATTTCTTTCAAGTTTTTTTGGAGACCATATATTACAGACTTGTTTGAATTTCAGTTTTCTAGTTCTTGTGTTGAAATTTTGTTGACAAAGTGGCCTTGGTGGTTCTTTCAATTACACCAAATGTTTCTGTTCTCGTTATCTTTTGAGTGAAAATTGTTAAATCCCAAGTTGCAACTATGTTATATATATCATAGCTTTTGAGTTTTGCATAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0117B06-OI86t/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U333644" ref_strand="+" ref_description="SGN-U333644        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: | Symbol: None | 60S ribosomal protein L9 (RPL90B), similar to RIBOSOMAL PROTEIN L9 GB:P49209 from (Arabidopsis thaliana) | chr1:12010886-12012504 FORWARD | Aliases: T9L6.2, T9L6_2(evalue: 5e-49, score=192) genbank/nr: gi|78191472|gb|ABB29957.1| unknown [Solanum tuberosum] (evalue: 1e-52, score=210)">
      <seq>atctcatcgttggtgccccaagggatacagatacaagatgcgttttgtatatgctcactttccgatcaatgcctccatcaccggaggtaacaagtccattgagatccgtaacttccttggcgagaaaaaggttaggaaagttgacatgcttgatggagtaacagttgttcgatctgagaaggttaaggacgagcttgtgttggatggaaatgacattgagcttgtttctcgctctgctgccctcattaaccaaaaatgccatgtgaagaacaaggatatccgaaagtttcttgatggtatctatgtcagcgagaagggtaaaattgtcgaagaagaatgagtattttagaagtaggcatgttggtgatggaccatatcccaaatcctcgttttaccatttctttcaagtttttttggagaccatatattacagacttgtttgaatttcagttttctagttcttgtgttgaaattttgttgacaaagtggccttggtggttctttcaattacaccaaatgtttctgttctcgttaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaanncccccccccaaaggggcccttttaaatttttttagggggccccaaaaaagggggggaaaaatcggggaaaaattttttccgggga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0117B06-OI86t/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0117B06.1" temp_strand="+" temp_description="C06HBa0117B06.1  AC211048.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0117B06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="11753" stop="124727"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="12035" g_stop="12165" g_length="131"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="130" r_length="130" r_score="0.977"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="12166" i_stop="12999" i_length="834">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="13000" g_stop="13122" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="131" r_stop="253" r_length="123" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="13123" i_stop="13228" i_length="106">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="13229" g_stop="13508" g_length="280"/>
          <reference_exon_boundary r_type="cDNA" r_start="254" r_stop="533" r_length="280" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="13509" i_stop="18250" i_length="4742">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="18251" g_stop="18278" g_length="28"/>
          <reference_exon_boundary r_type="cDNA" r_start="534" r_stop="561" r_length="28" r_score="0.679"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="18279" i_stop="20039" i_length="1761">
            <donor d_prob="0.990" d_score="0.00"/>
            <acceptor a_prob="0.790" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="20040" g_stop="20073" g_length="34"/>
          <reference_exon_boundary r_type="cDNA" r_start="562" r_stop="595" r_length="34" r_score="0.676"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="20074" i_stop="22421" i_length="2348">
            <donor d_prob="0.984" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="22422" g_stop="22508" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="596" r_stop="682" r_length="87" r_score="0.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0117B06.1" gen_strand="+" ref_id="SGN-U333644" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>683</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0117B06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U333644" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="12035" e_stop="12165"/>
          <exon e_start="13000" e_stop="13122"/>
          <exon e_start="13229" e_stop="13508"/>
          <exon e_start="18251" e_stop="18278"/>
          <exon e_start="20040" e_stop="20073"/>
          <exon e_start="22422" e_stop="22508"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCTCATCGTTGGTGTTACCAAGGGATACAGATACAAGATGCGTTTTGTATATGCTCACTTTCCGATCAATGCCTCCATCACCGGAGGTAACAAGTCCATTGAGATCCGTAACTTCCTTGGCGAGAAAAAGGTAATTTTTTTTTCAAAAGTTAATTTTCTTTGTTTCCTGAAGCTTTTTGTATGAACGAAATGTATGCATTAGTTTGTTAACATGATCGCTGACTACGTGATCTGGATTTATGCTTCTTAATTATAGTTCTTATTCTGTGGATTTTTGTGTTTTGAATGCTCTGATTCAGTCTCTGTATAAACCCATTGGATACTAATTTGAGCGAAAAGGGAGGCCCATTACACAGAAATGCATTAGTTTTATGTAAATATAAGATTTAATTTGTGATCCTTATTGCGTAGTTTTTTGTTGTAATTGTCCTTTTGTATATTCAAATGTGAAATTGATTGGCTTTGTAATTAGGAAGATAAAGTTGAAAAACTGTACCTGTCCAGAAAGGAAAGTCAAGATTCTATTGAACTTGTGTTTGAATTCCTATATCAATTCCATAGTTCTTTTTGAATGACTTCAATGATATGTTTTATTTGTTAAAAGTTATTAAAAGTTGTTCGAAAAAACTATCTTTGCCATTAATAATGCTGCTATGGAGATTAGTTGTATTCAGCTAGGTTTAGAACTTTGAGATGTTTGACTGAAATAGGTAGCAGCTAGTGTAATTGTTATAGATGCTGTAGAAATTGGTTATTTGATAAAGAAATGTTATGTCGTAGCTTATTTTATATCTATTAAGGAATCATTTCTGGCGTAGTGAATAAAGCCAGCTTGAGTCGTATACTACTTGGCTAGGTTTTGTCCTACGTATGGTAATGTCATATGTACTCTTCACTGCTCATTATCTATCCCATTTTGCTGTAGTAGTACCTGGAGATTTAACTTGTTTTATGGCTGTATCAGGTTAGGAAAGTTGACATGCTTGATGGAGTAACAGTTGTTCGATCTGAGAAGGTTAAGGACGAGCTTGTGTTGGATGGAAATGACATTGAGCTTGTTTCTCGCTCTGCTGCCCTCATTAACCAAGTAATCTCTATGTTCTATCTCCTAACATTGAACATTTAAACTTTGCGATACTATCAATTTGGATTGGCATCACTTAAATTTTTTTATTTTTTATCTTGTTGTACAGAAATGCCATGTGAAGAACAAGGATATCCGAAAGTTTCTTGATGGTATCTATGTCAGCGAGAAGGGTAAAATTGTCGAAGAAGAATGAGTATTTTAGAAGTAGGCATGTTGGTGATGGACCATATCCCAAATCCTCGTTTTACCATTTCTTTCAAGTTTTTTTGGAGACCATATATTACAGACTTGTTTGAATTTCAGTTTTCTAGTTCTTGTGTTGAAATTTTGTTGACAAAGTGGCCTTGGTGGTTCTTTCAATTACACCAAATGTTTCTGTTCTCGTTATCTTTTGAGTGAAAATTGTTAAATCCCAAGTTGCAACTATGTTATATATATCATAGCTTTTGAGTTTTGCATAACCTGCAGTATCGCGCTGACCTATACCCATTGGCATTGTCCAAGTAGTGTTCATCTTCCTCCCAAGTATTCTCCGGTACTAATGTTTTGACTGAAATAGCTGAAAATTTACAGTGTCACAGCTTGTCAATGTTGCTTAGTGCAATCATCTGAAGATTCTATGATTGCAGAATTTCCAACCTTTCTAATTATTTGTAGACCTGTTCTTAGTTTTGAACTGTTTTTGCTAAACAAAAGAGTTGAGGGTGAGCACTCATAATGTTTGTCAAATACTATCTTGTTTCTTGTGACTTTGACAGTTCTCACAGTATTCAAATATTGAAATTTATTCAACTATGCAAATTTTAACTTTTGTTGTGACGATTTCTCTTATCAAAGGTTGTGTAACTTTACTGTTGTTTGTGTATTGACATTCATTTGCATATGGACGTAAACAACGATGGGGTGGATAGATCTAATGAGGTGGCCCAAAAAAAAATGGGAAGAATTTCTTCTGAAGTTTATTTATTCGTTTTCAACATACAAAAAAATCGGACAAAGGTTAAAAATTACCGCACAAATAATATTTGGGAAAAAACTTGGCAAATAATGTTTGTTCATACACTTTGCCATTATTTGGCAAATATCCCAAGTACTAGTTTTTTTTAATATTTGGGCCAAATCTCATTATTTGAGATCTTCTAAAAATTAAAAGTTTACCCCAAATTTTTTTATTTTTTATAAAAACACCCTCTATAATTGTTACTTGCGTTGTATTACATAATTATTTACGTTAATTCCAATGTAGTGATGATATATTCAATGAATGTGAAATGGTAATATGATTATTGATGAAAACGATGAACAATCGACTCAACATAACAAAGTCATTTGTTTTGTATACTTCACGATGTATGAAATGATGCTTGTTGCACTCACTCTAACTTACCACATTACTCTAGTGTCATGGACACTATTTGTTATTGTTGTAACAAAGATCCAATTGACTAGTAATACTAATTTATGGTTAGTTCTGATATTTTTAAAATTTGTGATATATATCATATTTTTTTCTAAAAAAGTGAAATATATTTTTCAAATATTGGCCAAACACAAGATGAAATTTCACCCAAATTTTCATCCAAAAAAGATTTGTCAAGAATATTTGAAATCTAAGGCCAAACGCTAGCTTAGGTTTATTAGTTGATTATGCCTTATCATTAAAATAGAGTTACTTTTGCCCTCATCGTCGACAAACTTAACAAATATATCCCTGATTTGAACGGAATTTGAGGTAATTTGAAATTGGCTGGATTAGATTTGAAAAAGAGGTTGATGGGTAAAATTCGAGTTAATTTTAATTAATTTTGAGATTTCCAACCTAATCAGGGGTATATCTGTTAAGTTTGTAGACAACGAGAGCAAAAATAACTCCTTTATTTTAACAATAAGGGTATACTTAACTAATAAACTAAAGTTGAAAGATATTTTTGACTCATTCCAAAAATTATATAATAATCACTTTAACATTTCTCTAATCTTATGTTCTAAATTTTAGTATAATATTTGGCCATAAATGGTACAAACAAGCCTATTTATGTTTCTGCATTTTATTTAAACAAAAGTGATCAATGAGGAGATGTGTGTTGCATTTTTATTCTTGCTTCTAATTTTATACGTCGTGTATAAATGATTATATGAGCATATTTTTATTTGTTGAATCATAAATTATATCGCTAACGAATAAAATTGAAAATAAATATCTTATACATTTGATTATCAGTTTAGCATATTCATAAATTAAAAATTAATAAATCAAATTGATGATACTTACCAATCGGTTCAGATTATGTAAAGTAGATCAATGATTATAATTTTTAACTAAAATTCTAGAATAATTTAATTGACGAGTTTTAAATAACTTTAGTACATTATTATTGGTGAATGAAATACAATCTTTTTGTAGAAACAAGCGTTGTAGCCTTTTGGTTGTGAAATTTTGAGGATAATTGTTTAGAGGATTTTTTTTTTTACGATAGATAATATTTTAAATAAAAAATTTAAAGAAATTTAAAATTTTATTAGTAGAGGTTAGATCAAAATCTACTATTTGTTAGTCATTGCAAATATTAAACAATAATATAATGTTTTATCCATACGGTTGACGCAATATACATCAAATATAATTCTTCATAACTTCATAAAGTAGTGGGTAAATTTTAAAAGATTTAAATGGTGGTGTATATTAGGCTATTTATGTAAATAAGCACTTCTGGTTGAGAAGGTCCATTTTATCAAAGCCCAATCCAATAATAACAAATTATGGGCCTAAGCCCATTCAGAATTAGGGCTTTGATTTACATTCTAACCCGTTGAGAATTAGGGCTTTATAAAGCCGAAACGTTAGGGTTTTATACTCCATTTCATCCAGCCGAGAGAGATAGTGTGTGTGTGTGAGAGAGATTCAGAGGCGGCGAGGATGGTGAAGTTTTTGAAGCCAAACAAAGCTGTTATCCTTCTTCAAGGCAAGTATGCCGGCCGGAAAGCTGTGATCGTAAGGGCATTTGATGAAGGAACAAGGGACAGGCCATATGGCCATTGTTTGGTCGCAGGTATCTCCAAGTACCCGAAGAAGGTGATCCGCAAGGATTCAGCAAAGAAGCAGGCGAAGAAATCTCGTGTTAAGGCTTTCATCAAGCTCGTGAACTACAACCACATCATGCCTACTCGTTACACACTCGATGTGGATCTGAAGGATGTTGTCAATGCTGATGTTCTTCAGGCACGTGACAAGAAGGTGACCGCTGCAAAGGAGACCAAGGCTAGGCTTGAGGAGAGGTTCAAGACCGGGAAAAATCGCTGGTTCTTTACCAAGCTTAGGTTCTGAGCGAAGATTGAATCCGATTTTGATGAAATGGTAATTTTTTTTAGTATTAAAGAGTTTTGAGGAATGTGTTTGTTATCAAAGATACTATTAGGCTGTTTTTGTGTTTGCACTATTTTATTGATGGATAATTCCTGGCTCTTGTTTCAGTTACCTACAGTTTTATAATGGCTTGTTTCTAATGTTTGAGTAGCTTGATATTTCTATATTCCTGAGTCTATGTTTTGCTATTGTTAATTAGACGCTGCAGTAGCCAATTTACTGCTCTCATGTCTATGTTCTGTGTTGCCTTCTTCGGTGTGTGCACCAGAGGTTCTATATTAACATACTAAGTGCACAGATGCCTGTGTTCTAAGAGCTCTCTTATTATAATGTATGTTTTTTTTGCGAGAATAGATATGAGACTCATAATTCCAAAGAAAGTCGGCATAATTGTTCAAAGAATTAGCAATTTGTAGTTTGCTTTGTTTACTCACTTAGGAAACCCCCACAACAACATCAATAATAACATAGCTAGTGTGATTGCCATGAGGAATTGCCACCGGTGTAGTGCAATAGACTCTGGTAGTAATTATTCCGGACCAATTCAGCATAATGCTTCCTTATGGGATGGAATTTGAAGACTACCTTACCTTTTGTTGTCTTCTTTGCTTATCTTCTTCCTTGGGACATCCCATCACTATCGAATGTAGCTTAATGATTTATTGTCTACCAATCATTACATCATGGCTCGACTATCGATTGCTTTATTATCTGTGTCTGGCTATGTGAATCCTTAATAGTTCCTCCTACAAGTCCATTTCCTTCAAGCACGAAATGATTTGTCTTTTCAAGGTCAATTAGGATTGTTCAATCACTAGTATCTGTAGGTGTTGATAAAGTATATCGACCTTGCCTATGTATTAGAAGGGGAGTCCATGTTGGCTATAAGCAAGGCCAATATAGAGAACCTTACTCTCATTCAAGCCTTTTCATCTATAGAAGTTCATCAGGTTGTTCTTCGGCACATTCATCCATTCCACACTTCTTAATTCCCTTTGATGCAGTGCACCCTGATATCAGCCCCTTTTAACGCTTGCAATTCAATCTGTGTTAGATGTGTTGTATGACTAATTAGTTTTTCTAGATCAGTATGTCTTACAAGATCTTGCTACGTACTGAAATTGCACATAACACCTAGACTGTAGTCAGGAAAAGCTTTCCTATCTACCAATGTCATGTGATATCTGCTTACGGAATCGATGATGGCCAATATGAGATGTGAATTGTGTGAGTCTAGTTGTAAGGAGAAGTTGGTTTGTAAAGTGTTTGTAAGGTTCAAAAAGTGGCTGAAACCTCCATGAGTAATGGTTTGTAAAGTGTTTGTAAGGTTCAAAAAGTGGCTAAAACCTCCATTCGAGTACTGCTCCACCTTCCATATGCACGACTCTTTAAACAAAAATGATTTTAAACGTCTTCTTTCTCATGGATGTAGCTTCGAGGTTCATAATTTTGAACTCAGATTCAAGTTGTCTCCACTGATTTATTTATTAATAGAAAGCATTTTTGAGCCCTCAGACTTTTAGTTCGAGTGGTTATTGGATCTTGTTGCTAAGCTATAAGCTTGATATTTAAGTGGAGACGGAGAGAGGCGAAAATTTTCGAATTCAATAGGGGCTGTGCTCGTTTCCACAAGAAATTGTACAAACTACATAGCAAAATTTGTTACAGTAAAGATAGATTTTTTTTATTTTCTGTGTAAATAGTGCGAGTTATTTTCAGTAGTGATAAATCTTTCAAAAGGTAGAGCATATCAAATTAATGGACAAAAACAAGGAAAAAACTACATAACTAAATATCCTTCAGTGTCATATGCTATTATTATCTATGTTTTCAGACGTATTTCAATACTGATTTAAAGAGTTTCCTACGTAATTTACGGTTAGATACGTATATTTTACTATCATATATGCAAAAACGTCGAAAGAGATGAACAATATTGGGGAGGGATAAGAGATGAACAATATTGGGGAGGGATATGTATATTTCAAATATATATGAGTCACATTAGATACATGTATTGGTATCTATATAGATTGATTCACATTATCTAGGTGATAAAATTCATAGGAGAATGGGATATTCGCTATGTGTTACAGATACATGCAAATCTACTTATATACGTATCTAGAGGTATCAAAATATTGTAACTTGCGTAATATGATAAATTCAACTGTATCTAAGTAATTAGTTCATAACTTAGTGTAATTTATATAATATTTATACTTAATTTTCTTAACATCCCCATTAAATCAATAAATGTAGAGGATTCAAATTGTTTAACAAGTTATGATTTTACAATAAAGTAGGTTTCACCTCATACCACTAAAGTTTGAGAAAAGTTGTATGTACGAAATTATACTCTTATTTTCGTGAGACAAATGTTATTTTTGATTAATTTTTAATAATCCTCCTTCTTTATCCAAATTTGAAATCGACCACGTGAATAAACTAGAGAAGCAAAAAACCTAATAAGTGTGATGTTGCACTAAATAATGACATAAAACATTCAAATTGAAGTACATTCATGCCAGAGTCATATTTTAACTTCGTTAACGTCGCTAAAATTGTCCCTTTTTCCTTTTCAAATATGAAAATATTTAAATAAAAGATTATGACACTGACAACACAAAAATGCCAAAACTAGATTGAACACATAATACATACATTTTTTTTTAAATTTTTTCATGAACATCTACAAATATATCAGTAGTTATTTTATTATTTAGCTACACATATACTATATTAAATTTGTAAACAAACAATAAACCAAAAAAACTCTAATTCATTCAACTTTTTTTTTTATCATCACATAATTTGTACTGATTTGATTAATAAACAAACTTTTTAGTTTCTTCAAAAGTTTAAAAACTGTAATCTGGTTTACTAAATAATTTACTCCTTAAACCCCCAAATAAACCCCCTTTTTTAGCTTTCCCTTTATCTCCCCCTGAATTATTATTACTATCTTCCTTCTCTTCTTCTTCATCTCCATCTTCAACAAATGCTGGATGAGTGAAAATGCTCTTCAGCAATTGAGTTCCTCTCAGAGCATTCGTTAATGGCAAGTGTCCCTCGGGTGTTTCATCGTTCAATTCCCAAATAAATTCATTCGGAAAAGCCCTGTAATTGTGCTGATCCACTTCTTCAGACTCCAGTTTCTTCATCCATCCAATTTTGATGAAGAAATTCGTGAAATCTCTGTTCGCTTTGTTATTCCATATCTTCTTCTGAACACTGTAACCGAATTTTCCGTCGCTGTATTTCCTCCATAGCGAATCGATTTCCTTCAGGTCAGATTCGGAAATGAACTGAACTTCGGAGAAGAAAACGTATCCTCGTTTAACCGCTGCTTCTCCGGCTAAAACGATGAGTAAACGGCGAGTTTCCTCGTCTGCTTCCCGGAAATTTTGAGAAATTAAGTGTTGTTCGAGAGTATCGAAGGGGGTGGTGGTGATGGTGGTGGTGGTGGTGGTGGTAGGGGTAGTTGAGGAAACAGAGAAAGTTATGAGGTTATGATTGGAGAATGAGGAGGGGTTTTTGGTAATTGTCTTAGGAAAAAAAGAAGAAGGAGAAGAAGAAGAAAAAGGGTAAGGACAATCTATAGAATGCCTTCTTCTTAGTGTATGAATGGAGTTGAATGAATTTGTTGCCATTTTGCTTAATGCTTAGTAGTATAGTGAAGAGAAAAAGATGGAAAAAAATTGTGGGACATTTTGGTTAAGATATAACAAGGGTGGGGTAAGGGGGTGGGGTGGATGAGATAAGAAATGAGTGAGAGTGAAAGAAAGATGTCATCAAAGGAAATATAGTGCTTGAATGAGATTGGCTAGATTTGGGTGAGTTTGGATACTCTATATCACTATCTTTTATATCTCCATAGGCAAAAGAAAAAATACTAAGTTGTGTATTAAATTTAACACTTTGATACCTTATTTCTCATTCAATTCTAAATATGTGGTGTGGAAAAGTTTTCTACATATTATTCATTGTGTTTTTATGGTGGTTGTTGTCAAGTAAGGAATTTTGTAGACCACCATTCATACTATTAAGTAGGACCATTAAATGTGAAGTAGCTACCCCTCTATGTATTTTGTAAAGAAAAATGTCATTACTAATTTTCAAAATATCCCAAAGCTATTCAGACCACCTTTTAGTAGTTGAACGGTATATTTGAGCTAAAAATGTAATAATAAGGGTATTTTGTGAGCCAGAAATGTAAAAGAAGATAAAATCGACTTATTTTGAACCGTTAAAGAGTATGGTAACTATTTTCCTTTAAAGATGGTGAATAATAGATGGTGAATACGAGTAAGCTGAATTTTTGTTGTGGTCTACCACTTATTCAAGTTTAACTTTCGTAAGTTTGTAGAGCTTAATGTATACAATAAATAAGAAATCTACTTTAAAAATATCTTTATGCTAGAGTAATAAATAGTTCAATTGAATGTATGGAGTGCTACGTTTATCAATTTTTGAGTTAAATAATTTTTTTGTTTCATTCAACAAACAAGCCCTTATAGCTCAGTGGTAGAGCGTCAGTCTTGTAAACTGAAGGTCCGCAGTTCGATCCTGCGTGAGGGCAATTTTTTTAAACAATATTTGCCGTCCATGATATTATACTCGAATATCTTTTTCAATATTTGGTAACTTGTTGATTTCAACAAAAAAATTAAAAGACAAATTAAAAGACATTTTGTTACGTACCTATTTCTACTTATTTGTTTAGCCAAAGTGACCAAACCACAAGTTTGGTTTAATGTTTCTGCTTTATTATCATTATAATTATTATTTTTGAAGGTGGAATCACCCAAATTGGCCTAATTAATCACCATTCATTGGCCATCTTTCCAAGATGTGATGATTAAGTCTACCTTGATGGATGGATAATATATTTGTCATGCTAATGTAATCAAATTGTATTTTTCACTTCTTTCACCAGACACTTTGTAAAAGGAAGGTTTCAAACTTCATATTACTATTTAATATGGAAAAATTGATAGTGGCAATCATAGAATAAGCTTTATTCTTCCAGAGCAACAGATTCCATACAGGATGATCAAAATGTTAACGAGTAGTCAAGAAACATCATCTCAATGAATGCCAGAAGTGCAGCCTGCTGCATCTTTTCACATAGATATGCAGGCGAACGAGTTACTTTACTTGTACAATTCCTTGAATCTTCTGCAAGCTTCAATGACGTTTTCCCTGTGCCCAAAAGCACTCACTCTCACAAAACCTTCACCACCAGGCCCGAAACCACTGCCTGGAGTAGTAACGACATGAGTCTTCTCAAGTATCTCGCTGAAAACCTCCCATGAGCTTCGTCCAGGGAAGTGTACCCAGACGTAGGGTGCATTTTTACCTCCATACACCTTGTAACCTAGCGAGTTAAATGTGTCCATTATGATTTGTGTGTTCTCTTTATAGTAACCAACCACGTCCATCATGGCCTGAAATGCAAGGTCAACACACGTACGTTCACATTGAACTCTTAAGCCTATTATAATGATGTTTTTTTTATGATTACGCGAATAGGGAGCTGACCTTGAAACCATCAGGTGAAAGGCAAGCCAGACCACCAGCTTGAGCAATGTTGGATGCACCATTGAAGCTTGTACAAACAATGCGATTGAAGTCTTTTGCTACAGGAAATCCATCAGAATATAGGAGTGCTTTGGGAATGGCAGTCCACCCTAAACGAACACCAGTGAACCCAGCATACTTCGAAAATGATGAAACCTCAATGGCAACCTGCAAGTGCAGTACAATAAGCTTACTGAATCACATGGAACAATCCATTAATAATGTAAGAATCATTCAATAAACTTTGTATAAAAGCATTAGAGATTTGTGTCTCAATAGTAAATATAGAGAATTTCTACTGTTTGAGATCCACAAATCACTATTAACTAGAATGAAATAGGTCCAAATAGAGTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN</genome_strand>
        <mrna_strand>ATCTCATCGTTGGTG-CCCCAAGGGATACAGATACAAGATGCGTTTTGTATATGCTCACTTTCCGATCAATGCCTCCATCACCGGAGGTAACAAGTCCATTGAGATCCGTAACTTCCTTGGCGAGAAAAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTAGGAAAGTTGACATGCTTGATGGAGTAACAGTTGTTCGATCTGAGAAGGTTAAGGACGAGCTTGTGTTGGATGGAAATGACATTGAGCTTGTTTCTCGCTCTGCTGCCCTCATTAACCAA..........................................................................................................AAATGCCATGTGAAGAACAAGGATATCCGAAAGTTTCTTGATGGTATCTATGTCAGCGAGAAGGGTAAAATTGTCGAAGAAGAATGAGTATTTTAGAAGTAGGCATGTTGGTGATGGACCATATCCCAAATCCTCGTTTTACCATTTCTTTCAAGTTTTTTTGGAGACCATATATTACAGACTTGTTTGAATTTCAGTTTTCTAGTTCTTGTGTTGAAATTTTGTTGACAAAGTGGCCTTGGTGGTTCTTTCAATTACACCAAATGTTTCTGTTCTCGTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................NNCCCCCCCCCAAAGGGGCCCTTTTAAATTTTTTTAGGGGGCCCCAAAAAAGGGGGGGAAAAATCGGGGAAAAATTTTTTCCGGGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0117B06-OI86t/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U333641" ref_strand="-" ref_description="SGN-U333641        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: | Symbol: None | 60S ribosomal protein L9 (RPL90B), similar to RIBOSOMAL PROTEIN L9 GB:P49209 from (Arabidopsis thaliana) | chr1:12010886-12012504 FORWARD | Aliases: T9L6.2, T9L6_2(evalue: 3e-30, score=129) genbank/nr: gi|78191472|gb|ABB29957.1| unknown [Solanum tuberosum] (evalue: 3e-31, score=138)">
      <seq>gttaagcacgagcttgtgttggatggaaatgacattgagcttgtttctcgctctgctgccctcattaaccaaaaatgccatgtgaagaacaaggatatccgaaagtttcttcatggtatctatgtcagcgaaaagggtcacattgtcgaagaagaatgagtattttagaagtaggcatgttggtgatggaccatatcccaaatcctcgttttaccatttctttcaagtttttttgtagaccatatatttcagacttgtttgaatttcagttttctagctcttgtgttgaaatcttgttgacaaagtggccttggtggttctttcaacttacgccaaatgtttctgttcccgttatcttttcagtcaaaattgttgaatcccaagctgcatctatgttatatatctcccagcctttgagtgtcgcttaacgcaaccaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0117B06-OI86t/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0117B06.1" temp_strand="+" temp_description="C06HBa0117B06.1  AC211048.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0117B06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="12751" stop="13884"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="13051" g_stop="13122" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="72" r_length="72" r_score="0.986"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="13123" i_stop="13228" i_length="106">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="13229" g_stop="13572" g_length="344"/>
          <reference_exon_boundary r_type="cDNA" r_start="73" r_stop="417" r_length="345" r_score="0.939"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="436" polyA_stop="453"/>
      <MATCH_line gen_id="C06HBa0117B06.1" gen_strand="+" ref_id="SGN-U333641" ref_strand="-">
        <total_alignment_score>0.947</total_alignment_score>
        <cumulative_length_of_scored_exons>416</cumulative_length_of_scored_exons>
        <coverage percentage="0.918" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0117B06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U333641" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="13051" e_stop="13122"/>
          <exon e_start="13229" e_stop="13572"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTAAGGACGAGCTTGTGTTGGATGGAAATGACATTGAGCTTGTTTCTCGCTCTGCTGCCCTCATTAACCAAGTAATCTCTATGTTCTATCTCCTAACATTGAACATTTAAACTTTGCGATACTATCAATTTGGATTGGCATCACTTAAATTTTTTTATTTTTTATCTTGTTGTACAGAAATGCCATGTGAAGAACAAGGATATCCGAAAGTTTCTTGATGGTATCTATGTCAGCGAGAAGGGTAAAATTGTCGAAGAAGAATGAGTATTTTAGAAGTAGGCATGTTGGTGATGGACCATATCCCAAATCCTCGTTTTACCATTTCTTTCAAGTTTTTTTGGAGACCATATATTACAGACTTGTTTGAATTTCAGTTTTCTAGTTCTTGTGTTGAAATTTTGTTGACAAAGTGGCCTTGGTGGTTCTTTCAA-TTACACCAAATGTTTCTGTTCTCGTTATCTTTTGAGTGAAAATTGTTAAATCCCAAGTTGCAACTATGTTATATATATCATAGCTTTTGA</genome_strand>
        <mrna_strand>GTTAAGCACGAGCTTGTGTTGGATGGAAATGACATTGAGCTTGTTTCTCGCTCTGCTGCCCTCATTAACCAA..........................................................................................................AAATGCCATGTGAAGAACAAGGATATCCGAAAGTTTCTTCATGGTATCTATGTCAGCGAAAAGGGTCACATTGTCGAAGAAGAATGAGTATTTTAGAAGTAGGCATGTTGGTGATGGACCATATCCCAAATCCTCGTTTTACCATTTCTTTCAAGTTTTTTTGTAGACCATATATTTCAGACTTGTTTGAATTTCAGTTTTCTAGCTCTTGTGTTGAAATCTTGTTGACAAAGTGGCCTTGGTGGTTCTTTCAACTTACGCCAAATGTTTCTGTTCCCGTTATCTTTTCAGTCAAAATTGTTGAATCCCAAGCTGCATCTATGTTATATATCTCCCAGCCTTTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0117B06-OI86t/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U334628" ref_strand="+" ref_description="SGN-U334628        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: | Symbol: None | 60S ribosomal protein L27 (RPL27C) | chr4:8571829-8572485 FORWARD | Aliases: DL3545W, FCAALL.99(evalue: 2e-60, score=229) genbank/nr: gi|8131701|dbj|BAA96367.1| ribosomal protein L27 [Panax ginseng](evalue: 1e-63, score=246)">
      <seq>aatcggccgaattgcatttcatccagcccagtgagatagtgtgtgtgtgtgagagagattcaaaggcggcgaggatggtgaagtttttgaagccaaacaaagctgttatccttcttcaaggcaagtatgccggccggaaagctgtgatcgtaagggcatttgatgaaggaacaagggacaggccatatggccattgtttggtcgcaggtatctccaagtacccgaagaaggtgatccgcaaggattcagcaaagaagcaggcgaagaaatctcgtgttaaggctttcatcaagctcgtgaactacaaccacatcatgcctactcgttacacactcgatgtggatctgaaggatgttgtcaatgctgatgttcttcaggcacgtgacaagaaggtgaccgctgcaaaggagaccaaggctaggcttgaggagaggttcaagaccgggaaaaatcgctggttctttaccaagcttaggttctgagcgaagattgaatccgattttgatgaaatggtaattttttttagtattaaagagttttgaggaatgtgtttgttatcaaagatactattaggctgtttttgtgtttgcactattttattgatggataattcctggcnaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaccccccccaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0117B06-OI86t/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0117B06.1" temp_strand="+" temp_description="C06HBa0117B06.1  AC211048.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0117B06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="15676" stop="124728"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15978" g_stop="16583" g_length="606"/>
          <reference_exon_boundary r_type="cDNA" r_start="13" r_stop="618" r_length="606" r_score="0.993"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16584" i_stop="20039" i_length="3456">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.790" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20040" g_stop="20073" g_length="34"/>
          <reference_exon_boundary r_type="cDNA" r_start="619" r_stop="652" r_length="34" r_score="0.676"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="20074" i_stop="21148" i_length="1075">
            <donor d_prob="0.984" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="21149" g_stop="21173" g_length="25"/>
          <reference_exon_boundary r_type="cDNA" r_start="653" r_stop="677" r_length="25" r_score="0.600"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0117B06.1" gen_strand="+" ref_id="SGN-U334628" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>665</cumulative_length_of_scored_exons>
        <coverage percentage="0.982" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0117B06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U334628" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15978" e_stop="16583"/>
          <exon e_start="20040" e_stop="20073"/>
          <exon e_start="21149" e_stop="21173"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCATTTCATCCAGCCGAGAGAGATAGTGTGTGTGTGTGAGAGAGATTCAGAGGCGGCGAGGATGGTGAAGTTTTTGAAGCCAAACAAAGCTGTTATCCTTCTTCAAGGCAAGTATGCCGGCCGGAAAGCTGTGATCGTAAGGGCATTTGATGAAGGAACAAGGGACAGGCCATATGGCCATTGTTTGGTCGCAGGTATCTCCAAGTACCCGAAGAAGGTGATCCGCAAGGATTCAGCAAAGAAGCAGGCGAAGAAATCTCGTGTTAAGGCTTTCATCAAGCTCGTGAACTACAACCACATCATGCCTACTCGTTACACACTCGATGTGGATCTGAAGGATGTTGTCAATGCTGATGTTCTTCAGGCACGTGACAAGAAGGTGACCGCTGCAAAGGAGACCAAGGCTAGGCTTGAGGAGAGGTTCAAGACCGGGAAAAATCGCTGGTTCTTTACCAAGCTTAGGTTCTGAGCGAAGATTGAATCCGATTTTGATGAAATGGTAATTTTTTTTAGTATTAAAGAGTTTTGAGGAATGTGTTTGTTATCAAAGATACTATTAGGCTGTTTTTGTGTTTGCACTATTTTATTGATGGATAATTCCTGGCTCTTGTTTCAGTTACCTACAGTTTTATAATGGCTTGTTTCTAATGTTTGAGTAGCTTGATATTTCTATATTCCTGAGTCTATGTTTTGCTATTGTTAATTAGACGCTGCAGTAGCCAATTTACTGCTCTCATGTCTATGTTCTGTGTTGCCTTCTTCGGTGTGTGCACCAGAGGTTCTATATTAACATACTAAGTGCACAGATGCCTGTGTTCTAAGAGCTCTCTTATTATAATGTATGTTTTTTTTGCGAGAATAGATATGAGACTCATAATTCCAAAGAAAGTCGGCATAATTGTTCAAAGAATTAGCAATTTGTAGTTTGCTTTGTTTACTCACTTAGGAAACCCCCACAACAACATCAATAATAACATAGCTAGTGTGATTGCCATGAGGAATTGCCACCGGTGTAGTGCAATAGACTCTGGTAGTAATTATTCCGGACCAATTCAGCATAATGCTTCCTTATGGGATGGAATTTGAAGACTACCTTACCTTTTGTTGTCTTCTTTGCTTATCTTCTTCCTTGGGACATCCCATCACTATCGAATGTAGCTTAATGATTTATTGTCTACCAATCATTACATCATGGCTCGACTATCGATTGCTTTATTATCTGTGTCTGGCTATGTGAATCCTTAATAGTTCCTCCTACAAGTCCATTTCCTTCAAGCACGAAATGATTTGTCTTTTCAAGGTCAATTAGGATTGTTCAATCACTAGTATCTGTAGGTGTTGATAAAGTATATCGACCTTGCCTATGTATTAGAAGGGGAGTCCATGTTGGCTATAAGCAAGGCCAATATAGAGAACCTTACTCTCATTCAAGCCTTTTCATCTATAGAAGTTCATCAGGTTGTTCTTCGGCACATTCATCCATTCCACACTTCTTAATTCCCTTTGATGCAGTGCACCCTGATATCAGCCCCTTTTAACGCTTGCAATTCAATCTGTGTTAGATGTGTTGTATGACTAATTAGTTTTTCTAGATCAGTATGTCTTACAAGATCTTGCTACGTACTGAAATTGCACATAACACCTAGACTGTAGTCAGGAAAAGCTTTCCTATCTACCAATGTCATGTGATATCTGCTTACGGAATCGATGATGGCCAATATGAGATGTGAATTGTGTGAGTCTAGTTGTAAGGAGAAGTTGGTTTGTAAAGTGTTTGTAAGGTTCAAAAAGTGGCTGAAACCTCCATGAGTAATGGTTTGTAAAGTGTTTGTAAGGTTCAAAAAGTGGCTAAAACCTCCATTCGAGTACTGCTCCACCTTCCATATGCACGACTCTTTAAACAAAAATGATTTTAAACGTCTTCTTTCTCATGGATGTAGCTTCGAGGTTCATAATTTTGAACTCAGATTCAAGTTGTCTCCACTGATTTATTTATTAATAGAAAGCATTTTTGAGCCCTCAGACTTTTAGTTCGAGTGGTTATTGGATCTTGTTGCTAAGCTATAAGCTTGATATTTAAGTGGAGACGGAGAGAGGCGAAAATTTTCGAATTCAATAGGGGCTGTGCTCGTTTCCACAAGAAATTGTACAAACTACATAGCAAAATTTGTTACAGTAAAGATAGATTTTTTTTATTTTCTGTGTAAATAGTGCGAGTTATTTTCAGTAGTGATAAATCTTTCAAAAGGTAGAGCATATCAAATTAATGGACAAAAACAAGGAAAAAACTACATAACTAAATATCCTTCAGTGTCATATGCTATTATTATCTATGTTTTCAGACGTATTTCAATACTGATTTAAAGAGTTTCCTACGTAATTTACGGTTAGATACGTATATTTTACTATCATATATGCAAAAACGTCGAAAGAGATGAACAATATTGGGGAGGGATAAGAGATGAACAATATTGGGGAGGGATATGTATATTTCAAATATATATGAGTCACATTAGATACATGTATTGGTATCTATATAGATTGATTCACATTATCTAGGTGATAAAATTCATAGGAGAATGGGATATTCGCTATGTGTTACAGATACATGCAAATCTACTTATATACGTATCTAGAGGTATCAAAATATTGTAACTTGCGTAATATGATAAATTCAACTGTATCTAAGTAATTAGTTCATAACTTAGTGTAATTTATATAATATTTATACTTAATTTTCTTAACATCCCCATTAAATCAATAAATGTAGAGGATTCAAATTGTTTAACAAGTTATGATTTTACAATAAAGTAGGTTTCACCTCATACCACTAAAGTTTGAGAAAAGTTGTATGTACGAAATTATACTCTTATTTTCGTGAGACAAATGTTATTTTTGATTAATTTTTAATAATCCTCCTTCTTTATCCAAATTTGAAATCGACCACGTGAATAAACTAGAGAAGCAAAAAACCTAATAAGTGTGATGTTGCACTAAATAATGACATAAAACATTCAAATTGAAGTACATTCATGCCAGAGTCATATTTTAACTTCGTTAACGTCGCTAAAATTGTCCCTTTTTCCTTTTCAAATATGAAAATATTTAAATAAAAGATTATGACACTGACAACACAAAAATGCCAAAACTAGATTGAACACATAATACATACATTTTTTTTTAAATTTTTTCATGAACATCTACAAATATATCAGTAGTTATTTTATTATTTAGCTACACATATACTATATTAAATTTGTAAACAAACAATAAACCAAAAAAACTCTAATTCATTCAACTTTTTTTTTTATCATCACATAATTTGTACTGATTTGATTAATAAACAAACTTTTTAGTTTCTTCAAAAGTTTAAAAACTGTAATCTGGTTTACTAAATAATTTACTCCTTAAACCCCCAAATAAACCCCCTTTTTTAGCTTTCCCTTTATCTCCCCCTGAATTATTATTACTATCTTCCTTCTCTTCTTCTTCATCTCCATCTTCAACAAATGCTGGATGAGTGAAAATGCTCTTCAGCAATTGAGTTCCTCTCAGAGCATTCGTTAATGGCAAGTGTCCCTCGGGTGTTTCATCGTTCAATTCCCAAATAAATTCATTCGGAAAAGCCCTGTAATTGTGCTGATCCACTTCTTCAGACTCCAGTTTCTTCATCCATCCAATTTTGATGAAGAAATTCGTGAAATCTCTGTTCGCTTTGTTATTCCATATCTTCTTCTGAACACTGTAACCGAATTTTCCGTCGCTGTATTTCCTCCATAGCGAATCGATTTCCTTCAGGTCAGATTCGGAAATGAACTGAACTTCGGAGAAGAAAACGTATCCTCGTTTAACCGCTGCTTCTCCGGCTAAAACGATGAGTAAACGGCGAGTTTCCTCGTCTGCTTCCCGGAAATTTTGAGAAATTAAGTGTTGTTCGAGAGTATCGAAGGGGGTGGTGGTGATGGTGGTGGTGGTGGTGGTGGTAGGGGTAGTTGAGGAAACAGAGAAAGTTATGAGGTTATGATTGGAGAATGAGGAGGGGTTTTTGGTAATTGTCTTAGGAAAAAAAGAAGAAGGAGAAGAAGAAGAAAAAGGGTAAGGACAATCTATAGAATGCCTTCTTCTTAGTGTATGAATGGAGTTGAATGAATTTGTTGCCATTTTGCTTAATGCTTAGTAGTATAGTGAAGAGAAAAAGATGGAAAAAAATTGTGGGACATTTTGGTTAAGATATAACAAGGGTGGGGTAAGGGGGTGGGGTGGATGAGATAAGAAATGAGTGAGAGTGAAAGAAAGATGTCATCAAAGGAAATATAGTGCTTGAATGAGATTGGCTAGATTTGGGTGAGTTTGGATACTCTATATCACTATCTTTTATATCTCCATAGGCAAAAGAAAAAATACTAAGTTGTGTATTAAATTTAACACTTTGATACCTTATTTCTCATTCAATTCTAAATATGTGGTGTGGAAAAGTTTTCTACATATTATTCATTGTGTTTTTATGGTGGTTGTTGTCAAGTAAGGAATTTTGTAGACCACCATTCATACTATTAAGTAGGACCATTAAATGTGAAGTAGCTACCCCTCTATGTATTTTGTAAAGAAAAATGTCATTACTAATTTTCAAAATATCCCAAAGCTATTCAGACCACCTTTTAGTAGTTGAACGGTATATTTGAGCTAAAAATGTAATAATAAGGGTATTTTGTGAGCCAGAAATGTAAAAGAAGATAAAATCGACTTATTTTGAACCGTTAAAGAGTATGGTAACTATTTTCCTTTAAAGATGGTGAATAATAGATGGTGAATACGAGTAAGCTGAATTTTTGTTGTGGTCTACCACTTATTCAAGTTTAACTTTCGTAAGTTTGTAGAGCTTAATGTATACAATAAATAAGAAATCTACTTTAAAAATATCTTTATGCTAGAGTAATAAATAGTTCAATTGAATGTATGGAGTGCTACGTTTATCAATTTTTGAGTTAAATAATTTTTTTGTTTCATTCAACAAACAAGCCCTTATAGCTCAGTGGTAGAGCGTCAGTCTTGTAAACTGAAGGTCCGCAGTTCGATCCTGCGTGAGGGCAATTTTTTTAAACAATATTTGCCGTCCATGATATTATACTCGAATATCTTTTTCAATATTTGGTAACTTGTTGATTTCAACAAAAAAATTAAAAGACAAATTAAAA</genome_strand>
        <mrna_strand>TGCATTTCATCCAGCCCAGTGAGATAGTGTGTGTGTGTGAGAGAGATTCAAAGGCGGCGAGGATGGTGAAGTTTTTGAAGCCAAACAAAGCTGTTATCCTTCTTCAAGGCAAGTATGCCGGCCGGAAAGCTGTGATCGTAAGGGCATTTGATGAAGGAACAAGGGACAGGCCATATGGCCATTGTTTGGTCGCAGGTATCTCCAAGTACCCGAAGAAGGTGATCCGCAAGGATTCAGCAAAGAAGCAGGCGAAGAAATCTCGTGTTAAGGCTTTCATCAAGCTCGTGAACTACAACCACATCATGCCTACTCGTTACACACTCGATGTGGATCTGAAGGATGTTGTCAATGCTGATGTTCTTCAGGCACGTGACAAGAAGGTGACCGCTGCAAAGGAGACCAAGGCTAGGCTTGAGGAGAGGTTCAAGACCGGGAAAAATCGCTGGTTCTTTACCAAGCTTAGGTTCTGAGCGAAGATTGAATCCGATTTTGATGAAATGGTAATTTTTTTTAGTATTAAAGAGTTTTGAGGAATGTGTTTGTTATCAAAGATACTATTAGGCTGTTTTTGTGTTTGCACTATTTTATTGATGGATAATTCCTGGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................NAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAACCCCCCCCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0117B06-OI86t/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U313856" ref_strand="+" ref_description="SGN-U313856        Tomato 200607 #1 [61 ESTs aligned] arabidopsis/peptide: | Symbol: None | 60S ribosomal protein L27 (RPL27C) | chr4:8571829-8572485 FORWARD | Aliases: DL3545W, FCAALL.99(evalue: 1e-60, score=229) genbank/nr: gi|8131701|dbj|BAA96367.1| ribosomal protein L27 [Panax ginseng](evalue: 6e-64, score=246)">
      <seq>ggcgattggcggccaatcggccgaattgcatttcatccagccgagagagatagtgtgtgtgtgtgagagagattcagaggcggcgaggatggtgaagtttttgaagccaaacaaagctgttatccttcttcaaggcaagtatgccggccggaaagctgtgatcgtaagggcatttgatgaaggaacaagggacaggccatatggccattgtttggtcgcaggtatctccaagtacccgaagaaggtgatccgcaaggattcagcaaagaagcaggcgaagaaatctcgtgttaaggctttcatcaagctcgtgaactacaaccacatcatgcctactcgttacacactcgatgtggatctgaaggatgttgtcaatgctgatgttcttcaggcacgtgacaagaaggtgaccgctgcaaaggagaccaaggctaggcttgaggagaggttcaagaccgggaaaaatcgctggttctttaccaagcttaggttctgagcgaagattgaatccgattttgatgaaatggtaattttttttagtattaaagagttttgaggaatgtgtttgttatcaaagatactattaggctgtttttgtgtttgcactattttattgatggataattcctggctcttgtttcagttacctacagttttataatggcttgtttctaatgtttgagtaaaaaaaaaatcaaaaaaaaaaaaaaatgttttgctattgttaattagacgctgcagtagccaatttactgctctcatgtctaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0117B06-OI86t/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0117B06.1" temp_strand="+" temp_description="C06HBa0117B06.1  AC211048.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0117B06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="15676" stop="17020"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15978" g_stop="16719" g_length="742"/>
          <reference_exon_boundary r_type="cDNA" r_start="27" r_stop="766" r_length="740" r_score="0.972"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="767" polyA_stop="777"/>
      <MATCH_line gen_id="C06HBa0117B06.1" gen_strand="+" ref_id="SGN-U313856" ref_strand="+">
        <total_alignment_score>0.972</total_alignment_score>
        <cumulative_length_of_scored_exons>742</cumulative_length_of_scored_exons>
        <coverage percentage="0.955" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0117B06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U313856" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15978" e_stop="16719"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCATTTCATCCAGCCGAGAGAGATAGTGTGTGTGTGTGAGAGAGATTCAGAGGCGGCGAGGATGGTGAAGTTTTTGAAGCCAAACAAAGCTGTTATCCTTCTTCAAGGCAAGTATGCCGGCCGGAAAGCTGTGATCGTAAGGGCATTTGATGAAGGAACAAGGGACAGGCCATATGGCCATTGTTTGGTCGCAGGTATCTCCAAGTACCCGAAGAAGGTGATCCGCAAGGATTCAGCAAAGAAGCAGGCGAAGAAATCTCGTGTTAAGGCTTTCATCAAGCTCGTGAACTACAACCACATCATGCCTACTCGTTACACACTCGATGTGGATCTGAAGGATGTTGTCAATGCTGATGTTCTTCAGGCACGTGACAAGAAGGTGACCGCTGCAAAGGAGACCAAGGCTAGGCTTGAGGAGAGGTTCAAGACCGGGAAAAATCGCTGGTTCTTTACCAAGCTTAGGTTCTGAGCGAAGATTGAATCCGATTTTGATGAAATGGTAATTTTTTTTAGTATTAAAGAGTTTTGAGGAATGTGTTTGTTATCAAAGATACTATTAGGCTGTTTTTGTGTTTGCACTATTTTATTGATGGATAATTCCTGGCTCTTGTTTCAGTTACCTACAGTTTTATAATGGCTTGTTTCTAATGTTTGAGTAGCTTGATATTTCTATATTCCTGAGTCTATGTTTTGCTATTGTTAATTAGACGCTGCAGTAGCCAATTTACTGCTCTCATGTCT</genome_strand>
        <mrna_strand>TGCATTTCATCCAGCCGAGAGAGATAGTGTGTGTGTGTGAGAGAGATTCAGAGGCGGCGAGGATGGTGAAGTTTTTGAAGCCAAACAAAGCTGTTATCCTTCTTCAAGGCAAGTATGCCGGCCGGAAAGCTGTGATCGTAAGGGCATTTGATGAAGGAACAAGGGACAGGCCATATGGCCATTGTTTGGTCGCAGGTATCTCCAAGTACCCGAAGAAGGTGATCCGCAAGGATTCAGCAAAGAAGCAGGCGAAGAAATCTCGTGTTAAGGCTTTCATCAAGCTCGTGAACTACAACCACATCATGCCTACTCGTTACACACTCGATGTGGATCTGAAGGATGTTGTCAATGCTGATGTTCTTCAGGCACGTGACAAGAAGGTGACCGCTGCAAAGGAGACCAAGGCTAGGCTTGAGGAGAGGTTCAAGACCGGGAAAAATCGCTGGTTCTTTACCAAGCTTAGGTTCTGAGCGAAGATTGAATCCGATTTTGATGAAATGGTAATTTTTTTTAGTATTAAAGAGTTTTGAGGAATGTGTTTGTTATCAAAGATACTATTAGGCTGTTTTTGTGTTTGCACTATTTTATTGATGGATAATTCCTGGCTCTTGTTTCAGTTACCTACAGTTTTATAATGGCTTGTTTCTAATGTTTGAGTA-AAAAAAAAATC-AAAAAAAAAAAAAAATGTTTTGCTATTGTTAATTAGACGCTGCAGTAGCCAATTTACTGCTCTCATGTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0117B06-OI86t/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U334627" ref_strand="+" ref_description="SGN-U334627        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: | Symbol: None | 60S ribosomal protein L27 (RPL27C) | chr4:8571829-8572485 FORWARD | Aliases: DL3545W, FCAALL.99(evalue: 2e-60, score=229) genbank/nr: gi|8131701|dbj|BAA96367.1| ribosomal protein L27 [Panax ginseng](evalue: 1e-63, score=246)">
      <seq>cgatatagtgtgtgtgtgtgagagagattcagaggcggcgaggatggtgaagtttttgaagccaaacaaagctgttatccttcttcaaggcaagtatgccggccggaaagctgtgatcgtaagggcatttgatgaaggaacaagggacaggccatatggccattgtttggtcgcaggtatctccaagtacccgaagaaggtgatccgcaaggattcagcaaagaagcaggcgaagaaatctcgtgttaaggctttcatcaagctcgtgaactacaaccacatcatgcctactcgttacacactcgatgtggatctgaaggatgttgtcaatgctgatgttcttcaggcacgtgacaagaaggtgaccgctgcaaaggagaccaaggctaggcttgaggagaggttcaagaccgggaaaaatcgctggttctttaccaagcttaggttctgagcgaagattgaatccgattttgatgagatgcggagagggtttnnnattnnanagttttgatgaatgtgtttgttatctaaaatactattaggctgtttttgtgtttgcactattttattgatggataattcctggctcttgtttcacttacctacacttttataatggcttgtttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0117B06-OI86t/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0117B06.1" temp_strand="+" temp_description="C06HBa0117B06.1  AC211048.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0117B06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="15698" stop="16923"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15997" g_stop="16623" g_length="627"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="627" r_length="627" r_score="0.965"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0117B06.1" gen_strand="+" ref_id="SGN-U334627" ref_strand="+">
        <total_alignment_score>0.965</total_alignment_score>
        <cumulative_length_of_scored_exons>627</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0117B06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U334627" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15997" e_stop="16623"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAGATAGTGTGTGTGTGTGAGAGAGATTCAGAGGCGGCGAGGATGGTGAAGTTTTTGAAGCCAAACAAAGCTGTTATCCTTCTTCAAGGCAAGTATGCCGGCCGGAAAGCTGTGATCGTAAGGGCATTTGATGAAGGAACAAGGGACAGGCCATATGGCCATTGTTTGGTCGCAGGTATCTCCAAGTACCCGAAGAAGGTGATCCGCAAGGATTCAGCAAAGAAGCAGGCGAAGAAATCTCGTGTTAAGGCTTTCATCAAGCTCGTGAACTACAACCACATCATGCCTACTCGTTACACACTCGATGTGGATCTGAAGGATGTTGTCAATGCTGATGTTCTTCAGGCACGTGACAAGAAGGTGACCGCTGCAAAGGAGACCAAGGCTAGGCTTGAGGAGAGGTTCAAGACCGGGAAAAATCGCTGGTTCTTTACCAAGCTTAGGTTCTGAGCGAAGATTGAATCCGATTTTGATGAAATGGTAATTTTTTTTAGTATTAAAGAGTTTTGAGGAATGTGTTTGTTATCAAAGATACTATTAGGCTGTTTTTGTGTTTGCACTATTTTATTGATGGATAATTCCTGGCTCTTGTTTCAGTTACCTACAGTTTTATAATGGCTTGTTTC</genome_strand>
        <mrna_strand>CGATATAGTGTGTGTGTGTGAGAGAGATTCAGAGGCGGCGAGGATGGTGAAGTTTTTGAAGCCAAACAAAGCTGTTATCCTTCTTCAAGGCAAGTATGCCGGCCGGAAAGCTGTGATCGTAAGGGCATTTGATGAAGGAACAAGGGACAGGCCATATGGCCATTGTTTGGTCGCAGGTATCTCCAAGTACCCGAAGAAGGTGATCCGCAAGGATTCAGCAAAGAAGCAGGCGAAGAAATCTCGTGTTAAGGCTTTCATCAAGCTCGTGAACTACAACCACATCATGCCTACTCGTTACACACTCGATGTGGATCTGAAGGATGTTGTCAATGCTGATGTTCTTCAGGCACGTGACAAGAAGGTGACCGCTGCAAAGGAGACCAAGGCTAGGCTTGAGGAGAGGTTCAAGACCGGGAAAAATCGCTGGTTCTTTACCAAGCTTAGGTTCTGAGCGAAGATTGAATCCGATTTTGATGAGATGCGGAGAGGGTTTNNNATTNNANAGTTTTGATGAATGTGTTTGTTATCTAAAATACTATTAGGCTGTTTTTGTGTTTGCACTATTTTATTGATGGATAATTCCTGGCTCTTGTTTCACTTACCTACACTTTTATAATGGCTTGTTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0117B06-OI86t/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U324917" ref_strand="+" ref_description="SGN-U324917        Tomato 200607 #1 [5 ESTs aligned] arabidopsis/peptide: | Symbol: None | expressed protein | chr3:21959694-21960687 REVERSE | Aliases: F25L23.260(evalue: 2e-58, score=221) genbank/nr: gi|17380924|gb|AAL36274.1| unknown protein [Arabidopsis thaliana](evalue: 2e-56, score=221)">
      <seq>caaaatggcaacaaattcattcaactccattcatacactaagaagaaggcattctatagattgtccttaccctttttcttcttcttctccttcttctttttttcctaagacaattaccaaaaacccctcctcattctccaatcataacctcataactttctctgtttcctcaactacccctaccaccaccaccaccaccaccatcaccaccacccccttcgatactctcgaacaacacttaatttctcaaaatttccgggaagcagacgaggaaactcgccgtttactcatcgttttagccggagaagcagcggttaaacgaggatacgttttcttctccgaagttcagttcatttccgaatctgacctgaaggaaatcgattcgctatggaggaaatacagcgacggaaaattcggttacagtgttcagaagaagatatggaataacaaagcgaacagagatttcacgaatttcttcatcaaaattggatggatgaagaaactggagtctgaagaagtggatcagcacaattacagggcttttccgaatgaatttatttgggaattgaacgatgaaacacccgagggacacttgccattaacgaatgctctgagaggaactcaattgctgaagagcattttcactcatccagcatttgntgaagatggagatgaagaagaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0117B06-OI86t/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0117B06.1" temp_strand="-" temp_description="C06HBa0117B06.1  AC211048.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0117B06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="20443" stop="19162"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20143" g_stop="19462" g_length="682"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="682" r_length="682" r_score="0.999"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0117B06.1" gen_strand="-" ref_id="SGN-U324917" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>682</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0117B06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U324917" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20143" e_stop="19462"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAAATGGCAACAAATTCATTCAACTCCATTCATACACTAAGAAGAAGGCATTCTATAGATTGTCCTTACCCTTTTTCTTCTTCTTCTCCTTCTTCTTTTTTTCCTAAGACAATTACCAAAAACCCCTCCTCATTCTCCAATCATAACCTCATAACTTTCTCTGTTTCCTCAACTACCCCTACCACCACCACCACCACCACCATCACCACCACCCCCTTCGATACTCTCGAACAACACTTAATTTCTCAAAATTTCCGGGAAGCAGACGAGGAAACTCGCCGTTTACTCATCGTTTTAGCCGGAGAAGCAGCGGTTAAACGAGGATACGTTTTCTTCTCCGAAGTTCAGTTCATTTCCGAATCTGACCTGAAGGAAATCGATTCGCTATGGAGGAAATACAGCGACGGAAAATTCGGTTACAGTGTTCAGAAGAAGATATGGAATAACAAAGCGAACAGAGATTTCACGAATTTCTTCATCAAAATTGGATGGATGAAGAAACTGGAGTCTGAAGAAGTGGATCAGCACAATTACAGGGCTTTTCCGAATGAATTTATTTGGGAATTGAACGATGAAACACCCGAGGGACACTTGCCATTAACGAATGCTCTGAGAGGAACTCAATTGCTGAAGAGCATTTTCACTCATCCAGCATTTGTTGAAGATGGAGATGAAGAAGAA</genome_strand>
        <mrna_strand>CAAAATGGCAACAAATTCATTCAACTCCATTCATACACTAAGAAGAAGGCATTCTATAGATTGTCCTTACCCTTTTTCTTCTTCTTCTCCTTCTTCTTTTTTTCCTAAGACAATTACCAAAAACCCCTCCTCATTCTCCAATCATAACCTCATAACTTTCTCTGTTTCCTCAACTACCCCTACCACCACCACCACCACCACCATCACCACCACCCCCTTCGATACTCTCGAACAACACTTAATTTCTCAAAATTTCCGGGAAGCAGACGAGGAAACTCGCCGTTTACTCATCGTTTTAGCCGGAGAAGCAGCGGTTAAACGAGGATACGTTTTCTTCTCCGAAGTTCAGTTCATTTCCGAATCTGACCTGAAGGAAATCGATTCGCTATGGAGGAAATACAGCGACGGAAAATTCGGTTACAGTGTTCAGAAGAAGATATGGAATAACAAAGCGAACAGAGATTTCACGAATTTCTTCATCAAAATTGGATGGATGAAGAAACTGGAGTCTGAAGAAGTGGATCAGCACAATTACAGGGCTTTTCCGAATGAATTTATTTGGGAATTGAACGATGAAACACCCGAGGGACACTTGCCATTAACGAATGCTCTGAGAGGAACTCAATTGCTGAAGAGCATTTTCACTCATCCAGCATTTGNTGAAGATGGAGATGAAGAAGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0117B06-OI86t/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U317448" ref_strand="+" ref_description="SGN-U317448        Tomato 200607 #1 [20 ESTs aligned] arabidopsis/peptide: | Symbol: None | aminotransferase class I and II family protein, low similarity to Aromatic Aminotransferase from Pyrococcus horikoshii GP:14278621; contains Pfam profile PF00155 aminotransferase, classes I and II | chr4:16171697-16174681 REVERSE | Aliases: T16L1.170, T16L1_170(evalue: 0, score=694) genbank/nr: Aminotransferases(evalue: 0, score=707)">
      <seq>gacttgcaaattgcaaaaggggtggaagattagggttcttttaaaagcagcttttgggttctgagggctctactccactgagctacacaaggaaaaaatggcagctattcagcaaagtctttctacttcaatctcttcatcagcatctacttttctgggtcagaacaaactccgtttcaggaatcagaatgtgtcaatgccaggcaaaaccagtggtattgtcagatgtgttgcaacaccctctacggagaaaacttcttacaagacacaggtctcccgcaatgaaaacttagcgaaacttcaagctggttatctgtttcctgagatcgcaagaaggagatctgcacacatgttgaaacatcctgatgctcaaattataagccttggaattggtgacactaccgagcccattcctgaagtcataacttctgccatggcaaagagagcacatgaactgtcaacattaaatggttacagtggttatggtgctgagcaaggagaaaaacaacttagagcctccattgcttctacctattatgcaaatgttggactagaagaaaatgagatcttcgtttctgatggtgccaaaagtgatatatctcgacttcaggttctttttggatctaatgtgagtatggctgtgcaagatccatcatacccggcttatgtggactcgagtgttattatgggtcaaactggtcagtttcagaaggatgtggagaagtatgggaatattgcatacatgagatgtactccagaaaatgggttctttcctgatctatccagtgttcctcggacagacattatatttttctgttcgcctaataatccaactggttcggcggcatctagggagcagctgactaaattggtgcaatttgctaaagataatggctcgatccttgtttatgattctgcatatgctatgtatatatgtgatgacagtccaaagtccatctttgagattcctggagccaaagaggttgccattgaggtttcatcattttcgaagtatgctgggttcactggtgttcgtttagggtggactgccattcccaaagcactcctatattctgatggatttcctgtagcaaaagacttcaatcgcattgtttgtacaagcttcaatggtgcatccaacattgctcaagctggtggtctggcttgcctttcacctgatggtttcaaggccatgatggacgtggttggttactataaagagaacacacaaatcataatggacacatttaactcgctaggttacaaggtgtatggaggtaaaaatgcaccctacgtctgggtacacttccctggacgaagctcatgggaggttttcagcgagatacttgagaagactcatgtcgttactactccaggcagtggtttcgggcctggtggtgaaggttttgtgagagtgagtgcttttgggcacagggaaaacgtcattgaagcttgcagaagattcaaggaattgtacaagtaaagtaactcgttcgcctgcatatctatgtgaaaagatgcagcaggctgcacttctggcattcattgagatgatgtttcttgactactcgttaacattttgatcatcctgtatggaatctgttgctctggaagaataaagcttattctatgattgccactaaaaaaaaaaccatattaaatagtaatatgaagtttgaaaccttccttttaaaataaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0117B06-OI86t/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0117B06.1" temp_strand="-" temp_description="C06HBa0117B06.1  AC211048.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0117B06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="49517" stop="21130"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="49218" g_stop="49039" g_length="180"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="180" r_length="180" r_score="0.994"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="49038" i_stop="48432" i_length="607">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="48431" g_stop="48355" g_length="77"/>
          <reference_exon_boundary r_type="cDNA" r_start="181" r_stop="257" r_length="77" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="48354" i_stop="47982" i_length="373">
            <donor d_prob="0.795" d_score="1.00"/>
            <acceptor a_prob="0.669" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="47981" g_stop="47914" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="258" r_stop="325" r_length="68" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="47913" i_stop="47541" i_length="373">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.210" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="47540" g_stop="47424" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="326" r_stop="442" r_length="117" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="47423" i_stop="47091" i_length="333">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="47090" g_stop="47028" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="443" r_stop="505" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="47027" i_stop="46467" i_length="561">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.944" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="46466" g_stop="46362" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="506" r_stop="610" r_length="105" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="46361" i_stop="46275" i_length="87">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="46274" g_stop="46224" g_length="51"/>
          <reference_exon_boundary r_type="cDNA" r_start="611" r_stop="661" r_length="51" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="46223" i_stop="45812" i_length="412">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="45811" g_stop="45491" g_length="321"/>
          <reference_exon_boundary r_type="cDNA" r_start="662" r_stop="982" r_length="321" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="45490" i_stop="22238" i_length="23253">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="22237" g_stop="22031" g_length="207"/>
          <reference_exon_boundary r_type="cDNA" r_start="983" r_stop="1189" r_length="207" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="22030" i_stop="21937" i_length="94">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.962" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="21936" g_stop="21434" g_length="503"/>
          <reference_exon_boundary r_type="cDNA" r_start="1190" r_stop="1692" r_length="503" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="1693" polyA_stop="1711"/>
      <MATCH_line gen_id="C06HBa0117B06.1" gen_strand="-" ref_id="SGN-U317448" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>1692</cumulative_length_of_scored_exons>
        <coverage percentage="0.989" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0117B06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U317448" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="49218" e_stop="49039"/>
          <exon e_start="48431" e_stop="48355"/>
          <exon e_start="47981" e_stop="47914"/>
          <exon e_start="47540" e_stop="47424"/>
          <exon e_start="47090" e_stop="47028"/>
          <exon e_start="46466" e_stop="46362"/>
          <exon e_start="46274" e_stop="46224"/>
          <exon e_start="45811" e_stop="45491"/>
          <exon e_start="22237" e_stop="22031"/>
          <exon e_start="21936" e_stop="21434"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TACTTGCAAATTGCAAAAGGGGTGGAAGATTAGGGTTCTTTTAAAAGCAGCTTTTGGGTTCTGAGGGCTCTACTCCACTGAGCTACACAAGGAAAAAATGGCAGCTATTCAGCAAAGTCTTTCTACTTCAATCTCTTCATCAGCATCTACTTTTCTGGGTCAGAACAAACTCCGTTTCAGGTACCCAATTTAATAATCTTACATATTTTCTTTCATTTTGTTGATTCAGTTCCAGTTTATTCGTTTATTTTGAATCTTCATCATCTGCGTTAGATATAGATATTGCTTTAAGCATTAGATGAAGCAGTAGAGAAGAAATGTCCAATATGGGTTCAGCATTTTGACTTTGTTATGTATTTTAATGGGAAGAAGGTAATACTGTTCTCATGGGAAAAAGGAGTCCTTTTTTCTTCTGGTTTAATCTTGTACTTGCACTGATTATTGGGTTTTTTATTCTCCCAAATTCAAATGGAAAAAGGTGACCTTTTTGTGGTTTGTACTGATTCTTGAATTTGTTTCTTTATAAATTGTTTAATCTAAAAATATTTGATTCTGTTTTTTTTCTTAGTGTTCTCATTTCGACTAACATGAAGCTAAAGACTCTCCTTTTTTCCATATTAAACAAAGTTTCCTGCATTTACGTTCTAGGATAATTTTAGTAGTTTATGAACTGACGGGAATCTCATCTGGATTGGTAGTATAACAAGATTAACTCAATAAAAAACTATGGTTGCTTCCTTAATTCTTTGCTAATTCTAATGCATAAAGTGTGCATTAATTGTTTCAGGAATCAGAATGTGTCAATGCCAGGCAAAACCAGTGGTATTGTCAGATGTGTTGCAACACCCTCTACGGAGAAAACTTGTAAGCCTTTATTTTAGTGTTGGTTTCCAGTTATATATTGCCAAGTTGAAATGAGAATAGTAGACTTGCGAGCCTGTGCAATGTGGATCAGTTAGAGCCTTTGGCAATTAATGTTGAGAACTTTAAACTAATCAATGTATTGCATATAAATTATTTCAACTTGCTGAAAAAGCAAATTTAAGACTCAAAATGTTTGCTACATGCACGTTTTTGAAATGCAAGAATTGTAAAATTATTGTCTTTCAACAATAACAAAAAGAAAACAACTGTCAGTTTAGGTGAGGTCTTAGTCTCATCTGTATCAGTCCATTCAAATAGCTGTGCATTCTGTTAACATTTGACTGCGCTAACGAAATTTCTGTTTGTCTTGAAGCTTACAAGACACAGGTCTCCCGCAATGAAAACTTAGCGAAACTTCAAGCTGGTTATCTGTTTCCTGAGGTCTGTATTTCAACTGGTCAATTGTCATTAAGTTGATTGCTGTTTATCTGTATTTTTAAGGTACTTTGCTATAGAAGATGTAGCATTGCTTTTGGGAACATGCAAATAAAATATTGATTTAGATGAAATTGCAGTAATTTGGAATCACGATAAGCCAGTGAGCAAATTTAGTTACCTGAAGCAAAATTATTTGCTTTTTTAGCTGAATTTGGATGACTTATTATGTATCTTTACCTCTCTATGCTTCCATCCTGAAATAGGAGAAATAATTCAATTCTTTATAGTAATACACTCAAAGAGAACTCTTATTTTGTAAACCATCTCTCCTACCTGCATCGAGTTAAGTTCTAAACAATATCTTTGGTGAAGTTAGATCGCAAGAAGGAGATCTGCACACATGTTGAAACATCCTGATGCTCAAATTATAAGCCTTGGAATTGGTGACACTACCGAGCCCATTCCTGAAGTCATAACTTCTGCCATGGCAAAGGTAATACTGATATCTCTATCATACTATAGTTTTTTGTTATGGGTCAAAACTTCGAAGTTTACTGTATTTTTGTGTCCTATTCTGCCTGACCAATGATGGGATTACTAACAAAAATCATGTAGCTGGTAACACTTGGTTTTATACTAGACATCTGTCTAAATATTTCTGTTGATGAAAAATAAAATATTTCTGTTGATAGATTTCAGCATATGCTTACATAGACTACCATTTAACTTGATAGGTAGTGTGTATTTTTAATCTATTCTGCTTATTGAACTATAAGTCGATAACTTACTTCCTGTTCTTGATTTTGTTTTCTTTGCTCATTTGCAGAGAGCACATGAACTGTCAACATTAAATGGTTACAGTGGTTATGGTGCTGAGCAAGGAGAAAAAGTAAGTAGTGCCCCCTCTCGTCATATTTCAGTAATATGATATTAGCTCTACTATTTATTGTCCAATCCTTGTTTCTCTTCCTTCTTTTGCTACAATAATAATGGTTCTGGCCTTCACTGATAGTTTGTCTTTCCTCGTTTTGTACCAATTTGATTGTTCATTTGTCCTTTTCTTTCCTCAAATACATTGCAATATTCTTTATTCAGGTATCCACTCAATAAAGTTAAAAAACTTCCTCTTCTATTCATAACGTCATTAAGGGATGTGCAGATGTGCAGCTGAAATTTCCATTTCTTGGATCGACAATAATCTATTACTCTTTGCAATTTGCTTTTTATTCAACAAATTCTTGGTTTGCCTACCGAGTAAAGAAAAGAGATGTGAAATGTTTCATGTTTGGTGTTGTCAAGCATCATTATTTTGGATCCGTACTTTAAGATCGTAAGAGAAAATTTGTCTTTGGTCACCATATTTGTTATTCATAGCATTTAATCCGTGATTCAAATGTAAATTCAGCTGTCAGAATAACTCTGAATACATTGATTGTTTCTGCATGAGCAGCAACTTAGAGCCTCCATTGCTTCTACCTATTATGCAAATGTTGGACTAGAAGAAAATGAGATCTTCGTTTCTGATGGTGCCAAAAGTGATATATCTCGACTTCAGGTCTGGTTTACTCTGCATTTAGTGGGCTTTTCAAATTACTGAGCGGTCTTTCACTATCAGTTTATGAATTTCTTCACTGTATTGTAGGTTCTTTTTGGATCTAATGTGAGTATGGCTGTGCAAGATCCATCATACCCGGTAAATGTTTCAGGCTTATACCTCTGTTCTTCTCTATTATAGTATTATGACACAAATGAAAAAGAGTAGTTCGAGGGCAGCCCATGCTCATCCAGGATACCTGAAGATTGTAGATTAGCCATGCCTATTTTGTAATATGATTTTTCACATCATTGTGATATTTAAGTGAAGTGGTGCTACTTAATAACTTAGCACTAATTTTTATACTTTGTAAAAGTTATTGATATGTCTTTTGTTATTATCATTAATTCATTATTGCATCTAATTGCACCTTTTCCTTTTATTTGGTGCAATCTTTTTATTGTCTGTTAGACTACTCCGTGTTTTCTTAATAGGCCTTGGAGAAAGGCTCTCTTATGTGATGGTGTGTGTAAGATTCTGAAATGTGCGTTGATTGTTGTTTCTACTGTAGGCTTATGTGGACTCGAGTGTTATTATGGGTCAAACTGGTCAGTTTCAGAAGGATGTGGAGAAGTATGGGAATATTGCATACATGAGATGTACTCCAGAAAATGGGTTCTTTCCTGATCTATCCAGTGTTCCTCGGACAGACATTATATTTTTCTGTTCGCCTAATAATCCAACTGGTTCGGCGGCATCTAGGGAGCAGCTGACTAAATTGGTGCAATTTGCTAAAGATAATGGCTCGATCCTTGTTTATGATTCTGCATATGCTATGTATATATGTGATGACAGTCCAAAGTCCATCTTTGAGATTCCTGGAGCCAAAGAGGTAAGTTCAGATCATGTTGCTTGGTTAACATTGAGCTTTACTTTGTTTTCTAGTGAAAGCTTCTGTTATCATTTGGTCAAACCTGTAGCATATAACAGTATAATATCGATGACAAACTCATAATGTCTGTGTATCAGTTCGTTAGCAGTTACTTATTGGTACATTGCTACTATAACGATCCTTCTACTTCTATTACTCTTTTTAATCCCTTTACAGCCATACCTTCTATTATTCTTTTTGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCACTGTGACTAAAGGGCTTTACTGGTGCTGGCAATTGATATTTTGCCCAATTAATATTTTTTAACTGAGTAGAATATCTGAATGAGTTTTGCTAATGTGTATTCCATTTTTGACGTTGGATGCCATACTCCGGTTCTATTATTCTTCCATAATATGTTTAGAGTATTACAGAAGAGAAGTAGTAAGAGACCAGGAACAAGACTATGTGATTATGCGATGATAAATAAGATGGTTATCATCTTTTTGTTTGATGTTTATGGTGGATCAGAGTAGAATTAGAATTGATGGGTGGAACAATATTTGGGTATCGTAATCTAGGATCTTGATAAAATATTAGACTTCATTTCCTGTGTCAGTTTTTAAATTTTATTCCAGTCCTTGAATTAGCAAGTATCTTGAACGGAGATAACTGTTAGCTGTTGTGGAGGTATGGTATGTTTCGCTTTAAAGGGAAAAACTTCGAAATTTTACGTTATAATGGTTCACCTAGAAAGCATTTGAAATACCATTTAGGAACGAAGATCTGGTGACCTTTATAGCAGTATGAACCTAAGTTGCGCGGACTCTTCACTTTCAATGCCGCACCCGTCTCAGGTTCTCCAAAAATTCACTACTTTTGGCAAATCCGACACGCACCCCTTGACATTATTGAAGAGTCCGAGCAACATAGGTATGAACAGGGTTGGCGTATGCCTTAAAACATCCTGATTTCTGATCTTAAGTTATGTGATAGCAGATGCCCCTGCCCATTTTCTCCTGGAACTCCCCTTCTTCATTTGTTGTATTTGCCAAATACTGAGGCATGTACATTAGGCTCATCTTTACAGTTACAGTGTTAATTTAAATTACAGGTGTAATATCCATTCCAGAATAAGGTTGTCTTTTTTTTGTATGGAACACACTTGTCCTTTCTGTTTCTACCATTCCAAATCCCCTCACTGCCTATCAAATGCCTGTGTCTTTATTCAACTCAAACCGAGCAGTCTATGCTGTAGCCAGATATTCATAATCTCTTCTTGATATAAATGCCTCGGTTGTTTCACAGCATGCTTTGTCAATCTCCCCAAGCAACGAAACGTGCTTTGTCACTTTTAAGTGAACAAAATCTTGTCTGTCGGGTGGATGTAGAACTGTAGATCACTTTCGACTCTTCCCTTTTATGCTTTTTACTGCCTGTTCTGCTGAATACTAAATGATGCACCAAGTCATTATTAGACATCACCCTCGAAATCCTAGCTTGAAATGTAATGATCTGATCGTCAAGATTTGCTACATTCGCTAAATGAGTATAAACAACCATTTTAATGGTTTATAATGTCTTAGATTTAGATTTACTGGGTATTTTGCCTAATGTTTCCAGAATTCTGTTCTCAAATTCACTTCCGTTCATATTTTATTTCAGGTTGTTCGTAAGAAGTCCTTTGACATGCCACCTTTAAGTGTCAATGAAGCAATTGAACAGCTGGAAAATGTCGACCATGACTTCTATGGTTTCCGGAATGAGGAAACTGGTACTGAGAAACATCCTTACAACATCATAAACAGTTTTCTAAATGCTTCAAGGTATTTTGTTAATGATTTTATGCTTGTTGCAGGTGAGATTAACATCGTTTACAGACGAAAAGAAGGGGGTTATGGACTTATTATTCCAAAGGAAGATGGTAAAACAGAGAAGTTAGAGCCCTTGGAGGTTGAACCAGAGAAAGAACCGTCGATAGCAGAATAAATCGATATGGTAAAAGAGTTATTAGTTAGTCACTGAGTACATTTGCTTAGGCATAATGTTCACTCCTTGAGAGTCACAAGAAACAGTTTTATGAATTGAGAATATATTGCCAAAAAAGCTTCTGTATGAAATGAGTTCTGTAAAGTTTGTAACTAAAACTTGACAAGGAAAAATGCAGCTTTTCATTTCCTTCTCTATTGTTGTTGTAATATATTAACTACTGCATATTTCAGATTACAAAATCTTTATCTAATAACAAACCTGAAAAAAGGGTCTACTAACATCCTTGTGAATAAATACATAGTTCATCACATTTGAGAATCATTAATTACATATTTAATGGGATTCATGGAATTATTAACGACAAAATCTTGACTGGATAATCTCATATATGAAGAGTTATATATACGTTTAATTATCGTAATTCAACAAAAGAAAACTCTTAATAAATATAAAACGTTACTTGCATATAGTTCAAAATGCCTTTTTTAAGGCCATACGTATTAATAGTTTGATAGTTATGGTTATAAATATGATGCATGTCTGTCAAGAGATGCAAGAATTCATCTTCAAATGATACAAGGAGCCTAGACATTATCTAATCAAGCAAGCAAATTATCTTATATAAACTTGAAGATAAAAGGAGTTTGTTACAAAATTCAAAAACCAACCAACTACACAATGGAGAAATTAGTATTAACATTGTTAGCATTACTATTATACTTGGGATTAGTTTATGGAGAAATTAGTAACAAGTGTGTGTTTCCAGCAATATATAATTTTGGTGACTCGAATTCGGATACCGGTGGAAAATCAGCAGCATTCCGTCAAGTGCCTCCACCGAATGGACTAACTTTCTTTGGCAGTCCCATGGGCAGAATGTGCGATGGTCGTCTAATCATAGACCTCATAGGTAAAACTTATTCGTGTTTGATCAGGAGATCACGAGTTCAAGTTGTTAATTTTTTTTTTTCATGGTGTTGTAGCTGACAGGTTGGAGTTACAGTACTTGAGTCCATATTTAGATTCAGTAATGGCAAATTTTAGAAATGGTGCAAATTTTGCAACAGCTGGTTCATCTATACTTCCTGGTGGTTATAGTCCTTTTAGCCTTGAGGTTCAAATTTCTCAGTTTTTACAATTCAAAAAAAGGACTATGTTGCTCTCTGATTTATCAAGTGAGTTTTAACTTCTCATTGTCTTAATTTTCTACTAATATCTACATTGTATGAGTGTTTATGTTATTGACATTATTGATGCAGTTCCAAATAAATCAAAATGGTCTTCTTCAAAAGTCAACATTGCAAATCCACAAGATTTTTCAAAGGCACTGTACACATTTGACATTGGACAGAATGACCTTTCTTATGGTTTTCAATATACCCATGAAGCACAAGTCAGAGCATCCATTCCTCTAATCATAGACAATTTTACTCAAGCAATTCATGTATGTTCTTTCTTTCTTTTTTTTCGTAGAGCTCATACACATAGTATAAATTTCTCACAAAGGGTGTTTAACTGACCATCCTTCATTATATATGGTTTTGAGCCTACTGTCCAGTGTCCACCATATCCTTAACACGCGTTACTAAGGCATAAGGCTTGCTTTCTTATATACCTAACATCTCTCGTGTTTTTTCTACTTGGGATTTGGCTTAGATGCTACACATTTGGGAGACAAATACTAACTTTTGATTATTGAATCTCTTTTTTCTTTTTCTTACTAATGTTTGTGTATATACATGATTTGTGCAGCAACTTTACTATGAAGGGGCTGTGAATTTCTGGATCCACAATACAGGTCCCATTGGCTGTTTGCCCTACAGTGTGATAGATTATCCATTGAAGCCTCAGGGATTGGATGGCATTGGGTGCATAGAGAACGAAAACAAGGTGGCTCGTGAGTTTAACGAGCAACTCAAGGACAGGATATTACACTTAAGAGCAGAGCTTCCTGGTGCTGCATTTACTTATGTTGACATTTATTCAGCTAAGTATCAACTAATTAGCTCTGCGAAGGAACAAGGTAATTTCTATTGCTTTGTTAATAAACCCCACTACTCTTTGAATGAATGAACAAAACTGTAACCTATGCTGATTTCCTCCTAGAAGTTACAGTTATAGGAGCAGCCTGCTGCAGTCAAAGCATCCCTATTCATTTAGAGCCTGGGAAAGGGCACGTACCCTAACTGTAGGCAATCTACCTTGATGCAAGCATCAATGATTGATTCAACTGGTCGAACTTGGGACTTATAGAAAGTTCTGTTTACACAATCAATGTGTTTTATTTATAACCTATTATACCAGTTTGTAACTATTTTTATCAGGTTAACAATTATGAATGTTATCATAGAGATTTACCTTGAGCTACCTTATGAGTGAGCTGATTATATAATATCTTTTGAACTATCAGCACATAGAACTTAAACTAATATGGTCAACTATGCTTTGTTTTTTATGGGCAAACAGGTTTTGGAGACCCATTGAAATTCTGCTGTGGATGGTACAATAATGGTTCTGAAGTTGCATGTGGTCAGACAGCTATAGTGAATGGCACAGAGCATGGGAAGGCATGTAGTGATCCCACAAAGTACATTAGCTGGGATGGAGTACATTACACAGATGCTGCAAATGTCTGGTTAGCCAAATCAATTCTCAATGGCTCTTTCTCAGACCCTCCAGTTCCTATTGAACAATCTTGCAGTCACTCATCCACCTGAGTTTAACAAGATGTGCTTTGGACCGCCACGATTATCCTGCAATTTCCAAGATTAGTCCTTTACATAGAGCTACATATGTTATATTTGTCTACCACTGGGATGCCAATAAGAACTTCTCAATCTTATCTTTACTGTATGATCATTTTAATGTCATCTGCTACTCCTTGTCTCAGTTGTAATATGGTTTTTGTTATTAGAAAAATAAGTACATGGGACATGATCTGAAGCTAATCTTTTACTGGTACTACAATAATTATTACACTTCAAACTCGAGCAAGCTAAGAAGTCACACGCCAAATTGCTACCTCCAACTAGCACAAGTACCAGGCAACTCTGTCCACCCAAGCTTGGACAGCTCACTCCGTCATTCCTAGCAAGATTGTGAAAGAAACTTGAAAACCTTGAAGTTCCAACAAGTCCACAACTTCCTACTTCAAATGATAACACTGAGATGCATAACGTCATCAATCAAACTATAAGGTTAATTTCAGTAACAAGTTCATTGTTACTCGTTCAAGGTAAGGAGAAAGGACATGTTCCCTTTTCTCCAGAACTCACATAAGTATATACTCACGACTTTGAGCTAGTCATAATTTATGAGAAAAAGTTTCCAGGTAAAGAAAAAAGGAAATCTTGAACTTCATGTAACTCCCTGTCTGCACAATATATATACTAAACTACTCTACCTCGACCAATTTTAGAATCTATACACATCCTAAAACTTTCAGCTCTTTTAACCACTTGGCGGTTGAAGGACTATTGGAGCATGCTTCAAATATGAAAGGTGAGTTGCTAGTAGTATGCATTATGCAATAGAACTCATTTTCTCGTTTTGGTTTCTATTGTAGGTGGCACTTGTGAGCTACCGCCACTGCCACCACCAAGAGCTGCTGCAGCAGACTCCACATGAGTGAGAAGATATTCATAGATCTTTTTTCTTATCCTATCGATGGTCTCAGAAGCAATTTGGGGACTTTCATCATCCTTGCTAGAGGAGATCTCATCTAACCAGTCGTTCACACTCTTCAGCTGGGATAACATGCCGGCTATTTGACCATTATCTGATAAAGCTGAGGCATCAACATCAGCATCCAAGAACCTTTCTACAAATCCTAAGAACCAGTCTTGGGACGCTACTCGTAACATCTCGGCTAAGTCAACAGCCTCTTCAAGACCGTCTCCTCTGACCCAATCCGCTGGAGGAGGAGATTTTGGCTTTTGATTAGAAGCTATCCCATCTGCTAAGCGCCGTTGAGATCCTGATGACTGAATCTTAGAACTCATTGTCGGGCGGGGTTTGGCTTGAGGTTTTGCAAGAGTACTTTTGGTTGAGTTATCAAGGACTAGCATAGGTTGATTGAGAGCGATAGTCTTTGGGCTTGGCGAGGGAGCTGAAGGGGCAATTGGAGATGAAGTTGCTTTTTTGCTATACACTGAGAATGATGACAGATTGGTAGCCAACGCAGCATTGACCCATAGAGTTGCTTGCTTCCGTTTTTCTGATACAGCCTTAAGTGCTTCTTCAGAAGGGTTTTCTTCATGATCTGATTCTGAACCAGCAGCTGATATGGTCTTGGATAAAGCATCACCAACAAGGTGAACATTCTTCAAACTCGCATGCAGCGCCAAGAATTGCTCAACAGCAGGCTGTGCGTTATCTTCCTTTGCCGAGGAGCTCAACTCAGAATATGTGCTGAACAATTGAAATTGAACAATCAGCAGTTGTAAATTTGTGTAATAAAAAAAAACTTCAGTTGATGCACTGATGAACAAACAAATTGTAGAGATACCACTGTTTGAAAGTTCATAATAACCCCTAAAACCGAACCATGGTCCGGAGATTCTGAAAGATGTATATCCAAGTTAATTTTTACCAGCCAATAATAGAAACACCAATGTGGCACAGTACTGGCAAGATAACTCATGGCCGGGACAATTCAAAAGGGATATCCAGGATTGGAGTTAAATGACTCTTCAGGGATTGCTTATAAAAATATCAGATTTTATGGTCAACTCTCAGGTGCAGGACAGATTAGAAACGGGAAGGGTCCAAAGATAGACCTACAATATCAAAAGAGGACATGGCAAATCTATGATCCAACGAGGAACTGATTGACAAATGGACATGTAAGCTTATAGGAAATCAGAAACCCCCATATAAGTAATTGGTTTCATCTAGACAACAATGTGTGATGGCTGCCTTACTCAAGACAACCTTAGCCGAAGAAGCATTAAGAAAGTGATAGATGCTATATGTGCCAGGAGGAATCTGAGAGAGTGAGACAGTTGTTTCTACACTGTACAACAGCAGCTGACATTTGGAGCATATTTTTATCAGTCTTTGGACTTCGCTGGGTATAGGATGCTAATGGAAATCCATCGAAAGAATTGGCAAATGATGTCTGCTGCTATATTTTGGTGCATCTGGAGTGCGAGGAAATGTAGATGCTTAGAGGGGATTTCAACTCCTAATCACACTCTTAAAGCTAAATGTCTGATCAATTTATTTAGTTGGTTCAATCAGGCCCCTGTAACTAGTATTGAATTTTCTTTTGGATAATGTATGCTCCTTAGTTCTTCAGTAAAATTTGTATATAAGCAGATACTCTTCTGTTGTATATTTTTGCTATTCATCTTCTTGATGCCATTTAATGAAATTATCTTCATAAAAAGAACTAAGAAAAAAAAAAAGAAAGAACCATGATCCACTATTTGTGTAGGATAGCAAAGTAATCCTTATTCGATATTAACCCAACACATTGATTTAACTTGCTAATCAGTCTACCATGAATAATTAGAAACATAACTAGAATATTCTACAGAACTATTCCTTTCTTTTTTTTCTTGATGAAGTAAATGAATTTCATCCAAAAGCATCAAAAAGATGCAGAGCAACCTGCACTCAAGGGTGTGGTCTAGTGGTCAATGAGGTGGTTGATAACCAAGAGATAACACTAGATGGTTTCTTGTCATCTGTGTTAGCCTTGATAGACTCATCAGTTACCTGATACCTCTTGTTGGTGGGAGGTGGCAAGCTATGTTGCTCGGGCTCTTCAAATCCGACACGGGTGTAACATCGAAATTGAAGAGTCGGTGCAGCTTGGGTGGCAAGTAGTCCATGGAATTAATCGAGGAGCACAAAGCTGACCTGCCCACATCCAGCTGAAACTTAATCCCTTCTGGCACTTCTGCTGGAAAACCAACATTATTGGCTGGAAGGGCCCATTGGTTGCTAGAAGGGAATATTTCTTCCTTTTTGTTAAAGAGTTACTGTAGTAGCATTAAAAAGGTATGGTCTGTAATTTATAGGTGGAAAATGGGGCCGGCTGGATTGCATTTTTCCTTCCTTTCTTTTACCTTTTGCAGTAATTCAGGTTGGAAAAAGATCTATTCAACATTGTTATCACAAAAGGTCCAAGATGACTCGGTCAAGAAGCCCATAACAATGTGGATTCCTTCTAACTTTAGAAAACAGACATTACTCTAATGACGAAAAACATTCAAAGGCTGAAAATCAAATCATATTTATCTCATATCATTTTTCGCTAAAATCTATTCGTGTCAGATTTCAAGCACCCTGATTAAGAAAATGCAATTGCTAGCATGATCAAGAACTTTATAGATATTAACTCCAACTTTTACCATGTAAAATTGAAATTGAAGCAACAATGATCAAACCAGAAAACGTTACTGAAAATTGCACGGCGGAAGATCTTTGGGTGGTCACTTTTCTCATTCAACAAGAAGAAAATATTGCTATCCAAACAAACTAGTAAACATTTTGGCTTCATTATATGAGAGTATAAATCCAGTGAGACACATTTCAACTGGCTGTCATGTGAAGGAGCAGAGAGGAGTCTAGTCCCTGCCTCGGCTACCTCCTATTCTTCTACCCAAATTTTAAACCTTCATACCTTCCTATCTAGGGTTGTGTAGTTATGCCATTCCTTATCTAATTAACTCCCTCATGTTCTTCTTCGGCCTATCTCTATCCCTCCTAACTTCTATTATAGTCAATGTGTAACACCTCCTTACGGGTAAATCCACACAATTCCTCTTCACATGACCGGACCATGCTGGAGTACTGAAAAGTGAAGGAAGCCGAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTTCTCCACTTAAGTAATTATTTTATTTTATTTAAATTGATCAAACTTTAATTGAATAAAAAATAATTGAGCAGAAGTAGTGTATAATTATTTAATATAATTCTTTCACATAGTACGAACAATCTCCTCACGTTAAACTTGCATTTCTCGATCATAATACGAATAATATCCTCACATTGAACTTGCATTTTTTTTAATTATAATATGAATAATCTTCTCGCATTAAACTTGCATTTCTCGATTATAATACCAATTCTATTTATTTCATCATAACTTTAGTTAATTAATACTACTTACTTAAGTCCACCTAATGCTAATACTTTTTATGCAAATATTAAAGCAATGTCGTGTCACGTTACAATTATTTTAATAACATGTGACATTAAAATGTATATAATTCCAGTTGCAGATAGGGAGAGAGTACATAGATTGATCAATATGCTATCATATAACTCCTTTGAATTTGATCTTATTTATCTAATAAAATCTCCTTCTCGAATAAATGAAAAGGCGTACTAAATTCTGTTAAAAAGAAAAATGTATTTGAGCTTCTAGCTCCACCCCTGTATATATGGTGCAATACATATGTATCGAAAAATTAAATTTTAATATAAAAAAGAGATGAACAGATGAAAAAAGAATAAATACTACGGTGAATACTTTCTTGTAATTAAGTTAATATTTACATTAATCTGTATATATTTACCATGTGCATGAGTGGATGTAAATATTACGATTCGAGTTTAGCATTAAAAGCTAGTGAATTTTACGTAGATCTATATATATATATATATATATATATATGTATAACATTTTAATTTAATTATGAACTTGCTAAATAAGTAGAGATGAAATTAAAATTTCATAAATTGTATGTATTTCTTGCTAACTTGTGGAATTGTATAGTTGCAGTGTGAATATTTTTTAAGAGAATTGTACTTAACAATTTATTATTTAATCCTATAATAATAATTAAAATAAATGAACAGACAAGGGGATACTCTGATGGTTTCATAAGAAGACCCCATTCAACCACAAATTAAATTACAATCATATGATGAGATTCACGTGAATTAGAAGTATAAAGGGGATATTTGCGGATAAAATTATTTCAAATTACAGTTATAAAAGATACGATAAAATAACATTGAATTAAATAGGATAAAATAAAATATTGAATAAAATAAAGAAAAATATCTAAAATAAAAGTAATATAAAATTTGTATTCTAATTAATCGAAACTATTTCAACTAGACAAAGTATAATTCTAGTTCGAAACTTAATACATAGGACATGCCACATTATATCACATTCCAAAGGATAATAATATTGTTAAATAAGAATAAGCAAAAGCCTTTGATTAATATTTTATAAAAAAAATACGATAGATAATTTGAGAATAATAGAGATATTAACTAATAAAATCCAAAACTTAACTATTTATCGTTTATTTAAATTTTTAAAAAATATTGCATTGATACAAGTGGGGTATTATTTAAATAAGATATTGAAACAAGTGGAAATTTATTAAAACTAAAAACTATGGGTTTCTATCAGCCTACCAAAACAGAATCTTTGAAAACCACTCGTGGCCTTTATAATATTATCACCTGATATTTATTTATTTAATAAACAATAATTTCATTTTCTTGAATTTCAACTGTTAGTTTTTATTTGTTTGGCGCAGTGGGCGGTGCTTGAAAATTATGTTCTATCAAATAAAAGATAAAAATATATAGATAACATTTTTAATAATCAAAATTTTAGCATGGCTAAGGTATTTGAGACGATAGAAAATTATGTTCTATCAAATAAAAAACAAAAATATATAGATAACGTTTTTAATAATCAAAATTTTAGCATGATTAAAATATTTGATACGAAGATGTGTCATATCTTATCTAATTATATATTTTTTTATTTTTAATTATTTGTTCATTTTGATAAATACAAAAAAAAAATTATCTGTTATAACTTCAATTAATTGTACTGAAAAAGATAAAATATTTTTATAATATTAATTTTTTAATTTATCTACTTCACAATTTATAAAGATAAAATAATAAGTTCACTATGTTAATATTTATTTTTTTGGTGTCAATTTGAAAATGAACAACTAATTAAATACTAATGAATTACAAAAATAAATGTTACTTTTAGTTTATTAGTTAGAGACTTATTAGTGCTACTAGACTGCTAGCCCATATATAAAAACCCTTATATTAAGAGTCTGTTTGCATTGCTATGCTAAAAGGAATTTCATAAACACATTTTTAAATTGTAAGAAAAATGGCTTTTTAAAAAAAAAGTAATTTGCATTAAACTAATTTATTTGAAAATATTTTAATAAGAAAATTGTGCTTAAGCGAAGTTTTCTTTTTAAAAGATGCTTTTGAAAGTTAAATTACGATAAATGATAAGTATTTAATATAATTTTAATGTTAAAATTATTTTATTGAGAGAAATTTGGTTTAAACATTTATTATAAAAAATTGAATTAACTTTTTATTTATATTAAATCAAAATGTTCATATATATATATATATATATATATATATATATATATATATATATATATATTTATTTTATTTTATTATGACAAGAAAAATCACAATAAAAAGGTATATCATAAAATATTAATTAAAATTTTTATCGTTTGACTCTAAAAATTAAAATAATAACAATTAAAAAAGAAATAGAGAAAGTATAATTTCCACTCTTTTTTCACATTAAAAGTTACTAAAAATACCTCTACTTATAATTGTATAAATCAGATATACTTTGACTATAAAATTAAAAATATTTTTTCTATAAAATTTTAACTCAAATATACTTAGGATAGAAATTTTAAATATATATAATTTTTACTACAACATTTTTTAGAGATAAATTAAATAAATTAACAAATATCAAATTCTAAACAAACTAGGTTTTCCACGTAATTAAAAAAAAAATTCAACATTTATCTCTATAATAATATTAAAAATTATCTAGAAATTATTATTGTTTTAGGAATTCAGGATTAAAATTAGTAAATATGGTGATAATAGGAATAATTTAAATAAATTGTATCACGTAGTTATTATTATTAAAAAGTAATATGATGTATTAAGCTTTTCATTTTATGCTATATTTAGGAGGAAATCTGAATTAAAATAATCTATTATACACAACTATACTTTATATTTTTGTAAGAGACTATATCTTACTCGAACTTATGACTAATCATAAAACAATAATTCTGCTACTTTACCAACATCTTTTAATTATTTTTAATGAGCTTAAGAAAACTTAAGCCACAATTGAAATAGGATAAGGAGTACTAATTGTTAACTTAGTTGAATCCTAATCCCATTTGTATTAAATACTAATCCTTCTTCTACCAATTAGATTCTTTACCGGTCTTTTGTCCCAATGTTCACTCCCACTGAAATTCATACTTTTATCTTTTCACTAATTATACTAAAAAAAAAAACTCAATCAATTAATAAAGAAATCAAAACAATATATTATTAAAACCAAAAATAACTAAACCATCAATGATCTAGTCAATTAATTATTAATTAGACTTCAAATTGTTCAACTTTTAGAATGATTTAACACCTAGATCCTAGAAGATTAGTTATTAGTTGAATAATTAGGAGATTATTTAGCATAATTTTTGCCATTAACTAATAACAAGTCAACAAAATAAAAATTAGCAACAAAGTTCTTCAAGATTTTCCTTCTCTCCCCCTTTTATTTTATTTTTTAGCACTAGTTTAACTAAAAATCGTATAAAATATTTATCTATTTTTTCTAAAATCTTCACTTTTTTTTGTGGGATATTTTTCTGTCTTTAATCAAGATAATTAAGGTCCTACATCCACATAAAAGTGACGTGCCATTTAAGATTAATAATAATTACTATTAGCATTTTTTTTTGGATAATTATTACTCCTACTACAATAGTTTTTTTAATAATAAAATAAAATAAATCTCTATGCGTAATTAAATAGTTTTCTCTTCTTCATAGAACTCTTCAACCACCTTCTATATAAAGCTCCTTATAATTTTCACTTATCCTCCTCTTCTTCTCTCTGTTATACTATATAAAAATCTATAGATACACCTATAGATACATATATTTTCTCTATTCATCGTAGCCATGGCAGTTAACGGTGCTTCTTCTTCTGGTTTGATCGTCAGTTTCGGTGAGATGTTGATCGATTTCGTTCCGACAGTCTCCGGCGTATCCCTTGCCGAGGCTCCCGGATTTTTGAAAGCTCCCGGCGGTGCACCGGCGAACGTCGCTATCGCGGTGACGAGGCTCGGAGGGAAGTCGGCGTTCGTCGGGAAACTCGGCGACGATGAGTTCGGTCACATGCTCGCCGGGATTCTGAAAACGAACGGCGTACAAGCCGAAGGAATTAATTTTGACAAGGGCGCCAGGACGGCTTTGGCGTTCGTGACGCTACGCGCCGACGGAGAGCGTGAGTTTATGTTTTACAGAAATCCCAGTGCCGATATGTTGCTCACGCCCGCTGAGTTGAATCTTGATCTTATTAGATCTGTAAGTTATTTAATCTGTTTTTTTCTTCCCAACTCGCATTGGATTTGATGATCTGTGCGTGTTTCTCACGTGCAATTTCGTAGTTTTGTGATCACGAAGAAGCTGGTGAGTTTGTTGTTGTTTGTTTTTGACTCAACTGTAGTAATTAATTAATAAATTGAAAAAGACGTAAAACTTATTTTTATTTTTAGGTGGGTTGGTTTGGTGTCTTTTTTTTTTTCGACTTTACTGTCATTTTTCTAATTAACAACGTATCATTTTTTTGGATCCGATCCGGAATCGCTTAGTATGCCCACACATCCATTTCAATAGCGATTTCGCTTTTGTAAGTAAAAGGTGATCCCTATCCACTTTTTTAAAATTTTGTTTGTTTAAAGAGAGACAGCTAGAATTTTGTCACTTAGGATTTTAGTTAGAGATAAAATTAGGAATTATTGTGTTGCATGCAATTAAGATGAAGGTGTAAGTGACACGGATTTTTCTTGAAGAGTGGGTGAGTGTTGTCTGTTAGCTTAACACAACTTTTCCTGCCTTTCATGTGTTGAAATCTCAAAAACCTATGCTTTGTCTCTTTCTCTTTTGTTCCCACTTGCCTCTTATATTGTAGATTTTTAGTTCACATGATATTTGCTACAAAACCAAATTGATTTGTTTGCATTCAAATGGGTAGTTTATGTGTTTATTTTTTCATATTTTGAATCAAGCGAAAATTCTAGCTTCACGGAAAAAAGTGTATAATGACGATACATACTAGGAGGAATAGTATAGAGTGTATCGAAATCGAGTGGAGCCAAAAGGGGTAGGTGGGGAAGTATAGTTAAATTCATGTCAGGTGTCATTATCATGGAGTCAGTCATTAATTGTAGCTCACAAACTAATTAATTTTTGTATGGATTATAGTTTAATTTGTGAATTTTGTGTATATAGGCTAAGGTGTTCCACTATGGATCAATTAGTTTGATCGTGGAGCCATGTAGAGCAGCACATATGAAGGCAATGGAAGTAGCAAAGGAGGCAGGGGCATTGCTCTCTTATGACCCAAACCTTCGTTTGCCGTTGTGGCCTTCAGCAGAAGAGGCCAAGAAGCAAATCAAGAGCATATGGGACTCTGCTGATGTGATCAAGGTCAGCGATGTGGAGCTCGAATTCCTCACTGGAAGCAACAAGATTGATGATGAATCCGCCATGTCCTTGTGGCATCCTAACTTGAAGCTACTCTTGGTCACTCTTGGTGAAAAGGGTTGCAATTACTACACCAAGGTATATTCTATCTTTTGGTATTTCGTTTTTTAAATAATTTTTATACTCGTAATCGTTCCTATTTTATTTAATTGCTTATTATTGAATTCTCTAGTAGATAGCTGTAAAGTGGTAGGTAAGAACAACTTAGACGAACCATTGTTGTTTAATTTGTAATTAAAGTAAGCCAAGGAGGACCTACAACACTAAATTAGTGTGTCCCCTCATGCCTAATAAAGGCGTTTATTTTTTAAATTAGAATAGAGAATATTGTGTAATTGGTTTTGATAATTTGATCTGACTTAGTTCTTTTTTGGGGTGTAGAAATTCCATGGAACCGTTGGAGGATTCCATGTGAAGACTGTTGACACCACTGGAGCTGGTGATTCTTTTGTTGGTGCCCTTCTAACCAAGATTGTTGATGATCAAACCATTCTCGAGGTAAAATAATTACCTTTTCTTAGAACTAATTTAAGCGATAACGTGTCGTATAATATACTAATTTGTGTGGAAAAAAAAATGCAGGATGAAGCAAGGTTGAAGGAAGTACTTAGGTTTTCATGTGCATGTGGAGCCATCACTACAACCAAGAAAGGAGCAATCCCAGCTTTGCCTACTGCATCTGAAGCCCTCACTTTGCTCAAGGGAGGAGCATAGAAACATCGTGTTATCTTTTTTCTTTTTTCCATCTTCATATATTTCCCCCCCTTTATGAGTTTTTTTGAAGCTAGTAGGAAGCCTTTTCAGTTTTGGATTTTAATGTTTTGTTGTGATGAATGTCCATCAAGACACTTAATAAACTAAGCTTTCTTCATATGCAGCTTCCTTGTAACTTCTCCTTTACATCATCATACTAGTATTTCATTATCCAATTCTATATTCTAGTAGACATAGTTTTCACCTATTTCATTTGTCATCAAATCCTAGTAAAGTTGGGAATTTTGCCCAAGAGTTCATGAGTTCGATCATAGCTTCAACTGTTGTGTGCAGTAATTGATGAAGGATTGCAAGAGGCTCCCAGGAAAACTGGCGCTTGGAACATGAATGTTGCAAAAATATAGAGCATAACCAGCGCAAAATTACTAACTCAATTGCTGTAGCACAACTAGAGATAGAGGAGTTGTTGCCAAGAAAATTTGTTCCTAGGGTAGAGTCTACAAGGTAAAATCACAACTGTGGAGTAGTTCTTGTAACAAAACCAGATTTTACTATGTAGCAATATGCATAGCATGTCCAAGAATGCATCAATATGTTTATAAAATTGCTATAAGAAGAAGAAATTGATGCAATTCTACCAAGGAGGCGAAATGTAAGCAAGATAAAGGATATCTTAAGCAGAATAGTGTTTCCTCTACTTACTGAACATGTCTGTTGACAATATGAGCGCACTGCGAAAGTAAGCAAGATAAGGAGTATCTTAAGCAGAACAATACTTTTTCTACTTACTGAACATATCTGTTGACAGTATGAGAGCACTGATTAAGTACTACACACAAGCACACATGCACATTTAATTGGAAACTTCTTGAAGTTGGAGTTCAACCAAGATCGGGGACAGTAAAATACTCATCATCATCTGGGATTTCAATTCTGGACTTCTTGTAAGGCATTTGATATTTGGTTGTCCTGTAAATATTTGTATTGCTCGACTGAGGTACTGATAGCTCGGGCACTTCAGCTGCTGTTTGTTCACCAAAGAGATCAATGCCCCCTAACCACTCAAATTCACCAAGCTCAAGTAGATCCTTCTGTATTAGATTGAAACAACCAATATATAGGTTATTCATTACATATTAGATGAACAGACAATGACACCGTAATATACTGAATCAATGGTCACCACAGTTTCACATATTAGACTGACACCGGAATATACCCAAGGCCAACTTCGTATATACATGTAATGGTGTCATAAAATGTCTCCCTATGTATCGAGGAATCTAAGGAAGTCGTTTTGCATATTTGAGTGTTTCAAATTCAAGTTCAATGCTATGCATAAGCTGCATTACCAAGAAAATCGATAGCTTCTCATCTAGAGAAGTCCTCTATACGTCAATCCGCCAGCCACCAACCCAAGTGGTAGAAAATATAGGATACTTGCAAAATGAAAGGAATAAGTTTGTATTACCTTGTCACTCGACTCATAATCTGGAAATCCTAGTAAATCATCGACAGGCCAAGATGGTGATGTTATACAGGACAACTGCTGTGGAGGCATTTTCAAGCCAACTTGTTGGGAATTCTGCTGAGGTGGTTGTGGCTGCAGTTGGTTTTTTACTGATTCCTTATTACAGCTTGAGCTCAAGGCTACACGGATTCCAGTGGCTAAGAAGCGTTGGTGGTTCTTAGCGAGGCTGCTGGCTGAATGAATTGCTTCGTCACAGTCCTTGCAAAAGAGAGCTCTATCCTCAACACAGAAGATGAAGGCTGCTTTATCCTGCATACATAACAGTTCAAGTTAAATGCAAGCAAATATAAAAGTCTCGCAAAGATGGTCAGAGAATTTCTGGAAAAGACATTGATCTTTAACTTCCAATCTTTTTTCTCGGGTATGTTTACATCATTTTGACAGATATAACCATGTTCAGAAAAATCACTTTTAATTATCAATTGACTTACATATGCATATTCCAATTCAAATATAAGGTAAAAATTCTATGTGCAATAATATAGACATGAAATATCTTTGAGTTTTCGGGTCTTCAAAAGGGTTGATACCATCACAAAAGTATTGATTCCAACTCTGAAATTCGGTGGTTAACAAGTCCACACATCTACTTTTCTCCACTACAACACTAGGCTTAGTTTCCCATCAAGGTAAAACTTGTGACGTGCGCCTACCATACATTCAATGTTGTACTTACTACCTTTGATGTTGAACCAAAGCCCTCTGAAACTATCCCATATCCATGAAATCATTTTCACTATGCCCTATCTACACCTATAACTTCTTTCTTGTTTGAGATACTTAGTGGTTATGACATGAGGTTTAAGATGCGCAGTCTGGTAAGCCTCCATTCCTCCCTCTCCCCTATATCTTTAGCTAGAAAAGCAAGAACTTTGTTATCATACTATACTGCCTCTCAGTGGCAAATTTATATGCTAATTTTGGGGCTTGTAAATCATGGTCTCTCTGTGAAACTAGATATTTTAGGTATGTATTTTGTAAAGCTAATGGTGCACTTGATTGGTTGAATGCTAAGTTATTCGAATAGAGAACTCGGGATCAATTTTCCACTTAACACATTGTTTTTGTGGTGCAACCTTTTTCTACGATTCAAATCCTAGATCTGCCTTTGCTCCCTCTGCTTTCATTTTGCGTTTCGGGTTGACAGATCAAGAAATTTAATTAAGTGGCCAGAGACTTGAGTGGTCTTAAACTTGAGGGCAACATTACACCCTTTAAATACTATGACCTTAAAAGATGTCACATGTTGGAATTGAAGATCAGGAGCTAAAAAGGTAACAAGACACACGAATTAAAAGAAACAGAGTGATTAATACTAAACATAGAAATACAAAATTAACTATATGTGAAATGGTATTATTAATAATCTAATCAGAGTCTAATCAAAAGGAACATCACAAGTTAACTTTCCAACTTTTTTTATGACAAGGAAACCCGCAGCCGCTGCCCTTGAGTGCGCATAGGGGCTAACCCCGCTCTTATTTAACAGCTTGCAAACCCCGTTCCTATATAATAGCTTGCAAACCACATGGAAGATGTAATTAGCACTAGGCAAGTCCGGTGCACTGAGATTGACCCAGAAGGCACTTCAGACTTCCATGTTGAAAGTCCAAAGCCCAAACCAGTGGGAGGGTACACAAGTTAACTTTCCATTAATCAAGGAGCAACACAACTACCACATTGAAATATTAGTAACACAATCTAGACTAAAAACAAATTATTCCATGAACAGGGCAACAAAAAGAAGAAGTTCCCTTACTTGGCAAATATCACAAGGAGGAAGCTTGTTAGATAGGCACTGAAGATGAAGCCTTTGGTGCTTGCTTGCTAATTTATTAGCAGCATGAACTTCAATATCACATTTTGCACACAGAGCAGCCTCATCAGCACAGCAAATCACAGTAGCTTGAGCTTTCTCACACACATCACACTGTATCTTCATCTTTTTATCTTTTATTACTTAACTCTTTGCCTCCTAACACTAATTCAAGACATACCCATTTGAGTTTCACACAAGAAAAATTGAAAAAATAGTGTCTTGAAGCTTTTTATGAAGAGAACTCAGAACTTTTCAAGATTCGAAAATACCCCCAAAAGGGTCAGTCAGACAAAAAAGAAAAACCCTGCAAAAATCAAGAAAACCCAAAGCAGGTGATTTAGTCCAAAATACTAAAAATGAAAACTTTCAATCAAAAACAGAAAAATGTAGTGTTTGTAATGGGAAAAATGGGAGGAGAAAGTAGAAAAGAAGAAGAATATAGACAATGAAATGAGTGGAAGAGGGAGATTTGTGTGGATAAGAGAATAAGATTTGCGTATAAAATACTTGATGAGTATTGAGACAGCACAGTATTAGCAGGGCTCCACTTTCTTCCCTTTTGTGTGGCTGTTGGGTTGCCGTTAATATTAGTGGCTATGAATATTTGGGCATTATTTATTTCTACTCCCCTTTCGTGGACGATGGCTGTTGGTGGGGGTTTGAAATACCAGATTCACACGCATCTACCTCAATATATCAATGATATTTTTGGAGTCGAAAACGAATATAGGATTTGAAGTTTATAGTATGTTATCTCCTGTATTCAAAGTAGCAAATTAAAAATAATAAAAGTTAAAGAGAAAAATATAAAGAACTATTCAAGTCCACAGAACCGCTGTGTGTCTCTTAAGAAATTTAATCCTCTTAAGTATCTGATGTTTCATATTAATTTCTCCGGAGATAAAACGGATTAACCATTAAAGAAGTGGTGGTGTCTGAAACTTCAAAAATTTCAACAAACTCAAAATGACAGCAATGAAGATTAACCATTAAAGAAGTGGTGGTGTCTGAAACTTCAAAAATTTCAACAAACTCAAAATGACAGCAATGAGTCACGCACAGACACGATCGATCGATTTTGTTTTGTAAGAAATGTATGCAAGAAGAGTGAAGAATTCGATGTAGAAAATGAGAGAAAACCTCTTTATTTATAGTCAACAAAGGATAAAGGTTACAACTCTTTGGAAATAAGATAACCTTTCATAATTAACCTTTCAGTAGACCCTTCATTTTCTGTTTATACCTTTAGAACCCAACATTTGAGATGACGTTTAATTTATTGTTCGTTGGAGAGGGGTGATAAGAATGTGTTATCAAAATTTAAAAATATGTTTTTGTAAAGGAATTGTTAGATCAATTATGTTTTTGATCAGTTAAAATTACACGTTTTGAGAGATAAGGATGCATAGATGGATAAAAGACAAGATTATGAATTGAGATATATGGGGCATATGGCAGTAATTTTTATTATAGACAAGATGCAAGAATTCAGACTAAAATGATTTGAACATGTGAAGAGGAAAAGTGTACATGTGATTCGGTGAGGGTGCAAGAGTTGCCAGTGTTAGACTTAAGGAGAAGTAAAGGCAAATCAAGAAAATAGTGAGAAACATGATTAGATATGACATGACGTATTTTAAATTAGCGATAATATAACTCTAAATAGAAGTGCATGAAGGTCTAGCATTTATGATAGATAGGTAATAGAAAATGAAGTGTTTTCTTTCTTCTAAATATGATAGCAACGTCCTAATATGGAGCATCTACAATTCTACATCTTCTATTATCATTATTATTGTGCTAATATTATCTAATTCTTAGTTGTATTATTAATTATCACTATTTTCCCTTTTTTAGTAAATGGAAAAGTTTCATTAAGGAGGACTATACTATCTTAATTAGTTTAAGGAAAGACACAAATTTAGATTCAAATATCCATATTGTGAGTTTTTGATCATACATATCCTTTAACTAAATTCCAAACATAAATTACATCATTAAAGTATTATTTTTAGCAGAAAAAATTATTTAACTATATCCCAAACTTAAACTAAATCTTTAAAATATCATTTTTAGCAGAAAACATCCTTTAAATATTTGTAAGAACAATTTTCATTCTTTTATTAGATATTGTCAAAAAATTAAGGTTACTTACGAGAAAATGTGTAGTTAACATAACTATCAACAAAAGTTATTCTGAAAAGTTTCATTATTTTCTACAAGAAGTTCTTTAAAATTAAATCTTAGACATTGTTGCTCATGGAAACTAAAAATGATTGGAAGGTGTGAGTGCACATGATTTGCTTTTTTCCTAACGAAAAGAAGTTGCAGATTAATTATTTTTACCTTTTTTTTAACCAATAAAATGAATAAATTTTTGGGTCAATCTAATATCAAAGTGACCAAAATATTGATAATGTCTCGTGTTTGAGTTTCATTCTATAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGATAGGTAGAATATTAAGTTTTATATAAGTAATATTGTGTTTAATTGCTAGTTATAAGATGATATTATCAATATTTTCGTATTTCTAACTAACTATCGAATGACTCTTCAAATTTCAAAGTAACGTAGATTTTGTTATATTTTCTTTCCCTTTACCACTTGTTATAGGCAGAGATACTAAATATTGTTATGTACAAATTTGAGAAAATTTGGAAGTACTGTGAATTTCGTTCTTTTTTATTCCCCTATATCATCTTTTTGAAAAAAAATTATCAAGCGTTTGAAGCACATTTGAAATCTTGACTAAATTTTGAATTACACATCAGATGACTTATTTGGAGATAGCGCTTCTGATAAAATTTCTATCATATTCAAAGTTAAAATCCAAAATTTTTAATTAAAATGAAGTATCTCATCACTACACTACAACTCATTTTGATTCTCCGTACCACTTGTTAAATAGAGTTATTAATTACGATTAGATACAAAAATGAGAAAATTCTAAAGGGAAAAATGAGAAAACACTTCCTTGCATATTTATTTGAGTTAATATCTCAGATGGTCACTCAACTATGCAATTTTCTCTTATAAGTCACTCAACTTTCAATTTTCACAGTCACTCAACTATTGCTTTCTTTTTCTGGAAGTCACTCAACTTTGAATTTTAATTCAAAAGTCACTCAACTATTCACTCTTTCCTCAAAAAGTCACTCAATCTATTAAATTATTTTTTAATTAAAATTTATTGATATTAATTATTTATATAACAAACCAAAATTTTTAAAAAATATAAATACCATTTAAACCATTTAGTGATCCACCCACCTAACCCGACCCATTAAAAAAATATGATATGACCCATTTTATTTTGTCTTTAATCCTAATTCAAGATTTAAAGAAAGAGATTAATTTAGGATTAAAGACAAAATAAAATGGATCATATTATATTTTTTAATGGATCGAGTTAGGTCGATGAATCATTAAATGGTTTAATAATTTCCTCTTAAATCATTAGTTTACTTTTTTATGTCCACTTCACCTTTTTTTGCAACATCCATTTCACGTGTTCCTATCGTTAATCTCGTGGTAGGGAATTACTCAGTACTAGTAGTATCCCTCTCAAAAACTAAAATATTTTACATGAAAAATTAACTTTATAATGCTCGAAAAATGATATTGCGTATATATCGTTTATTATATTTATCAATTTCTTAAAATATGTATATATAGTTTGATTTGAATATTATTATTAAAAAAAATATTAAAAATTAAATTTAAATAAAATTATAAACTAATATCGACGAAGTCTATTTTCAAAAAAAGGTTATGGAGGTTCACATGCTAAGTGGGACCCTTTGTGTTGGATATATTGGAGTAGTAAATAGTTTTACTTTTATATATATATATGGCTGAGAAATTTCCAATTAATTGGAAAAGTTCCAATATTTCATGATATTTTCGTCGTTTATTGGTTTGGGAATTTTCTCAAGAATTGGATAGGATTTTTTAAAATTAAAATAATTTAGCCAATATCCAAGAAATTTCATATCGTGATTGTATTTATTTTTCGATAAATTCAAAAACATATAATAAAGATTCCTGATGTTTCTTACAAATGTGTAGTACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACTCTATTTGGACCTATTTCATTCTAGTTAATAGTGATTTGTGGATCTCAAACAGTAGAAATTCTCTATATTTACTATTGAGACACAAATCTCTAATGCTTTTATACAAAGTTTATTGAATGATTCTTACATTATTAATGGATTGTTCCATGTGATTCAGTAAGCTTATTGTACTGCACTTGCAGGTTGCCATTGAGGTTTCATCATTTTCGAAGTATGCTGGGTTCACTGGTGTTCGTTTAGGGTGGACTGCCATTCCCAAAGCACTCCTATATTCTGATGGATTTCCTGTAGCAAAAGACTTCAATCGCATTGTTTGTACAAGCTTCAATGGTGCATCCAACATTGCTCAAGCTGGTGGTCTGGCTTGCCTTTCACCTGATGGTTTCAAGGTCAGCTCCCTATTCGCGTAATCATAAAAAAAACATCATTATAATAGGCTTAAGAGTTCAATGTGAACGTACGTGTGTTGACCTTGCATTTCAGGCCATGATGGACGTGGTTGGTTACTATAAAGAGAACACACAAATCATAATGGACACATTTAACTCGCTAGGTTACAAGGTGTATGGAGGTAAAAATGCACCCTACGTCTGGGTACACTTCCCTGGACGAAGCTCATGGGAGGTTTTCAGCGAGATACTTGAGAAGACTCATGTCGTTACTACTCCAGGCAGTGGTTTCGGGCCTGGTGGTGAAGGTTTTGTGAGAGTGAGTGCTTTTGGGCACAGGGAAAACGTCATTGAAGCTTGCAGAAGATTCAAGGAATTGTACAAGTAAAGTAACTCGTTCGCCTGCATATCTATGTGAAAAGATGCAGCAGGCTGCACTTCTGGCATTCATTGAGATGATGTTTCTTGACTACTCGTTAACATTTTGATCATCCTGTATGGAATCTGTTGCTCTGGAAGAATAAAGCTTATTCTATGATTGCCACTATCAATTTTTCCATATTAAATAGTAATATGAAGTTTGAAACCTTCCTTTTA</genome_strand>
        <mrna_strand>GACTTGCAAATTGCAAAAGGGGTGGAAGATTAGGGTTCTTTTAAAAGCAGCTTTTGGGTTCTGAGGGCTCTACTCCACTGAGCTACACAAGGAAAAAATGGCAGCTATTCAGCAAAGTCTTTCTACTTCAATCTCTTCATCAGCATCTACTTTTCTGGGTCAGAACAAACTCCGTTTCAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATCAGAATGTGTCAATGCCAGGCAAAACCAGTGGTATTGTCAGATGTGTTGCAACACCCTCTACGGAGAAAACTT.....................................................................................................................................................................................................................................................................................................................................................................................CTTACAAGACACAGGTCTCCCGCAATGAAAACTTAGCGAAACTTCAAGCTGGTTATCTGTTTCCTGAG.....................................................................................................................................................................................................................................................................................................................................................................................ATCGCAAGAAGGAGATCTGCACACATGTTGAAACATCCTGATGCTCAAATTATAAGCCTTGGAATTGGTGACACTACCGAGCCCATTCCTGAAGTCATAACTTCTGCCATGGCAAAG.............................................................................................................................................................................................................................................................................................................................................AGAGCACATGAACTGTCAACATTAAATGGTTACAGTGGTTATGGTGCTGAGCAAGGAGAAAAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACTTAGAGCCTCCATTGCTTCTACCTATTATGCAAATGTTGGACTAGAAGAAAATGAGATCTTCGTTTCTGATGGTGCCAAAAGTGATATATCTCGACTTCAG.......................................................................................GTTCTTTTTGGATCTAATGTGAGTATGGCTGTGCAAGATCCATCATACCCG............................................................................................................................................................................................................................................................................................................................................................................................................................GCTTATGTGGACTCGAGTGTTATTATGGGTCAAACTGGTCAGTTTCAGAAGGATGTGGAGAAGTATGGGAATATTGCATACATGAGATGTACTCCAGAAAATGGGTTCTTTCCTGATCTATCCAGTGTTCCTCGGACAGACATTATATTTTTCTGTTCGCCTAATAATCCAACTGGTTCGGCGGCATCTAGGGAGCAGCTGACTAAATTGGTGCAATTTGCTAAAGATAATGGCTCGATCCTTGTTTATGATTCTGCATATGCTATGTATATATGTGATGACAGTCCAAAGTCCATCTTTGAGATTCCTGGAGCCAAAGAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................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      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0117B06-OI86t/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U313843" ref_strand="+" ref_description="SGN-U313843        Tomato 200607 #1 [54 ESTs aligned] arabidopsis/peptide: | Symbol: None | zinc finger (B-box type) family protein / salt-tolerance protein (STO), identical to SP:Q96288 Salt-tolerance protein (Arabidopsis thaliana); contains Pfam profile PF00643: B-box zinc finger | chr1:1828412-1829889 REVERSE | Aliases: T21E18.9, T21E18_9(evalue: 2e-65, score=246) genbank/nr: CONSTANS(evalue: 3e-116, score=421)">
      <seq>tcttccactcatttcattgtctatattcttcttcttttctactttctcctcccatttttcccattacaaacactacatttttctgtttttgattgaaagttttcatttttagtattttggactaaatcacctgctttgggttttcttgatttttgcagggtttttcttttttgtctgactgacccttttgggggtattttcgaatcttgaaaagttctgagttctcttcataaaaagcttcaagacactattttttcaatttttcttgtgtgaaactcaaatgggtatgtcttgaattagtgttaggaggcaaagagttaagtaataaaagataaaaagatgaagatacagtgtgatgtgtgtgagaaagctcaagctactgtgatttgctgtgctgatgaggctgctctgtgtgcaaaatgtgatattgaagttcatgctgctaataaattagcaagcaagcaccaaaggcttcatcttcagtgcctatctaacaagcttcctccttgtgatatttgccaagataaagcagccttcatcttctgtgttgaggatagagctctcttttgcaaggactgtgacgaagcaattcattcagccagcagcctcgctaagaaccaccaacgcttcttagccactggaatccgtgtagccttgagctcaagctgtaataaggaatcagtaaaaaaccaactgcagccacaaccacctcagcagaattcccaacaagttggcttgaaaatgcctccacagcagttgtcctgtataacatcaccatcttggcctgtcgatgatttactaggatttccagattatgagtcgagtgacaagaaggatctacttgagcttggtgaatttgagtggttagggggcattgatctctttggtgaacaaacagcagctgaagtgcccgagctatcagtacctcagtcgagcaatacaaatatttacaggacaaccaaatatcaaatgccttacaagaagtccagaattgaaatcccagatgatgatgagtattttactgtccccgatcttggttgaactccaacttcaagaagtttccaattaaatgtgcatgtgtgcttgtgtgtagtacttaatcagtgctctcatactgtcaacagatatgttcagtaagtagaaaaagtattgttctgcttaagatactccttatcttgcttactttcgcagtgcgctcatattgtcaacagacatgttcagtaagtagaggaaacactattctgcttaagatatcctttatcttgcttaaaaaaaaaaaaaaaaaaagaattgcatcaattttttcttcttatagcaattttataaacatattgatgcattcttggacatgctatgcatattgctacatagtaaaatctggtttgtaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0117B06-OI86t/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0117B06.1" temp_strand="+" temp_description="C06HBa0117B06.1  AC211048.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0117B06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="25934" stop="124721"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26234" g_stop="26755" g_length="522"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="522" r_length="522" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="26756" i_stop="28265" i_length="1510">
            <donor d_prob="0.935" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28266" g_stop="28574" g_length="309"/>
          <reference_exon_boundary r_type="cDNA" r_start="523" r_stop="831" r_length="309" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="28575" i_stop="28954" i_length="380">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="28955" g_stop="29508" g_length="554"/>
          <reference_exon_boundary r_type="cDNA" r_start="832" r_stop="1385" r_length="554" r_score="0.968"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="29509" i_stop="31805" i_length="2297">
            <donor d_prob="0.000" d_score="0.98"/>
            <acceptor a_prob="0.858" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="31806" g_stop="31829" g_length="24"/>
          <reference_exon_boundary r_type="cDNA" r_start="1386" r_stop="1409" r_length="24" r_score="0.625"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0117B06.1" gen_strand="+" ref_id="SGN-U313843" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>1409</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0117B06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U313843" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26234" e_stop="26755"/>
          <exon e_start="28266" e_stop="28574"/>
          <exon e_start="28955" e_stop="29508"/>
          <exon e_start="31806" e_stop="31829"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTTCCACTCATTTCATTGTCTATATTCTTCTTCTTTTCTACTTTCTCCTCCCATTTTTCCCATTACAAACACTACATTTTTCTGTTTTTGATTGAAAGTTTTCATTTTTAGTATTTTGGACTAAATCACCTGCTTTGGGTTTTCTTGATTTTTGCAGGGTTTTTCTTTTTTGTCTGACTGACCCTTTTGGGGGTATTTTCGAATCTTGAAAAGTTCTGAGTTCTCTTCATAAAAAGCTTCAAGACACTATTTTTTCAATTTTTCTTGTGTGAAACTCAAATGGGTATGTCTTGAATTAGTGTTAGGAGGCAAAGAGTTAAGTAATAAAAGATAAAAAGATGAAGATACAGTGTGATGTGTGTGAGAAAGCTCAAGCTACTGTGATTTGCTGTGCTGATGAGGCTGCTCTGTGTGCAAAATGTGATATTGAAGTTCATGCTGCTAATAAATTAGCAAGCAAGCACCAAAGGCTTCATCTTCAGTGCCTATCTAACAAGCTTCCTCCTTGTGATATTTGCCAAGTAAGGGAACTTCTTCTTTTTGTTGCCCTGTTCATGGAATAATTTGTTTTTAGTCTAGATTGTGTTACTAATATTTCAATGTGGTAGTTGTGTTGCTCCTTGATTAATGGAAAGTTAACTTGTGTACCCTCCCACTGGTTTGGGCTTTGGACTTTCAACATGGAAGTCTGAAGTGCCTTCTGGGTCAATCTCAGTGCACCGGACTTGCCTAGTGCTAATTACATCTTCCATGTGGTTTGCAAGCTATTATATAGGAACGGGGTTTGCAAGCTGTTAAATAAGAGCGGGGTTAGCCCCTATGCGCACTCAAGGGCAGCGGCTGCGGGTTTCCTTGTCATAAAAAAAGTTGGAAAGTTAACTTGTGATGTTCCTTTTGATTAGACTCTGATTAGATTATTAATAATACCATTTCACATATAGTTAATTTTGTATTTCTATGTTTAGTATTAATCACTCTGTTTCTTTTAATTCGTGTGTCTTGTTACCTTTTTAGCTCCTGATCTTCAATTCCAACATGTGACATCTTTTAAGGTCATAGTATTTAAAGGGTGTAATGTTGCCCTCAAGTTTAAGACCACTCAAGTCTCTGGCCACTTAATTAAATTTCTTGATCTGTCAACCCGAAACGCAAAATGAAAGCAGAGGGAGCAAAGGCAGATCTAGGATTTGAATCGTAGAAAAAGGTTGCACCACAAAAACAATGTGTTAAGTGGAAAATTGATCCCGAGTTCTCTATTCGAATAACTTAGCATTCAACCAATCAAGTGCACCATTAGCTTTACAAAATACATACCTAAAATATCTAGTTTCACAGAGAGACCATGATTTACAAGCCCCAAAATTAGCATATAAATTTGCCACTGAGAGGCAGTATAGTATGATAACAAAGTTCTTGCTTTTCTAGCTAAAGATATAGGGGAGAGGGAGGAATGGAGGCTTACCAGACTGCGCATCTTAAACCTCATGTCATAACCACTAAGTATCTCAAACAAGAAAGAAGTTATAGGTGTAGATAGGGCATAGTGAAAATGATTTCATGGATATGGGATAGTTTCAGAGGGCTTTGGTTCAACATCAAAGGTAGTAAGTACAACATTGAATGTATGGTAGGCGCACGTCACAAGTTTTACCTTGATGGGAAACTAAGCCTAGTGTTGTAGTGGAGAAAAGTAGATGTGTGGACTTGTTAACCACCGAATTTCAGAGTTGGAATCAATACTTTTGTGATGGTATCAACCCTTTTGAAGACCCGAAAACTCAAAGATATTTCATGTCTATATTATTGCACATAGAATTTTTACCTTATATTTGAATTGGAATATGCATATGTAAGTCAATTGATAATTAAAAGTGATTTTTCTGAACATGGTTATATCTGTCAAAATGATGTAAACATACCCGAGAAAAAAGATTGGAAGTTAAAGATCAATGTCTTTTCCAGAAATTCTCTGACCATCTTTGCGAGACTTTTATATTTGCTTGCATTTAACTTGAACTGTTATGTATGCAGGATAAAGCAGCCTTCATCTTCTGTGTTGAGGATAGAGCTCTCTTTTGCAAGGACTGTGACGAAGCAATTCATTCAGCCAGCAGCCTCGCTAAGAACCACCAACGCTTCTTAGCCACTGGAATCCGTGTAGCCTTGAGCTCAAGCTGTAATAAGGAATCAGTAAAAAACCAACTGCAGCCACAACCACCTCAGCAGAATTCCCAACAAGTTGGCTTGAAAATGCCTCCACAGCAGTTGTCCTGTATAACATCACCATCTTGGCCTGTCGATGATTTACTAGGATTTCCAGATTATGAGTCGAGTGACAAGGTAATACAAACTTATTCCTTTCATTTTGCAAGTATCCTATATTTTCTACCACTTGGGTTGGTGGCTGGCGGATTGACGTATAGAGGACTTCTCTAGATGAGAAGCTATCGATTTTCTTGGTAATGCAGCTTATGCATAGCATTGAACTTGAATTTGAAACACTCAAATATGCAAAACGACTTCCTTAGATTCCTCGATACATAGGGAGACATTTTATGACACCATTACATGTATATACGAAGTTGGCCTTGGGTATATTCCGGTGTCAGTCTAATATGTGAAACTGTGGTGACCATTGATTCAGTATATTACGGTGTCATTGTCTGTTCATCTAATATGTAATGAATAACCTATATATTGGTTGTTTCAATCTAATACAGAAGGATCTACTTGAGCTTGGTGAATTTGAGTGGTTAGGGGGCATTGATCTCTTTGGTGAACAAACAGCAGCTGAAGTGCCCGAGCTATCAGTACCTCAGTCGAGCAATACAAATATTTACAGGACAACCAAATATCAAATGCCTTACAAGAAGTCCAGAATTGAAATCCCAGATGATGATGAGTATTTTACTGTCCCCGATCTTGGTTGAACTCCAACTTCAAGAAGTTTCCAATTAAATGTGCATGTGTGCTTGTGTGTAGTACTTAATCAGTGCTCTCATACTGTCAACAGATATGTTCAGTAAGTAGAAAAAGTATTGTTCTGCTTAAGATACTCCTTATCTTGCTTACTTTCGCAGTGCGCTCATATTGTCAACAGACATGTTCAGTAAGTAGAGGAAACACTATTCTGCTTAAGATATCCTTTATCTTGCTTACATTTCGCCTCCTTGGTAGAATTGCATCAATTTCTTCTTCTTATAGCAATTTTATAAACATATTGATGCATTCTTGGACATGCTATGCATATTGCTACATAGTAAAATCTGGTTTTGTTACAAGAACTACTCCACAGTTGTGATTTTACCTTGTAGACTCTACCCTAGGAACAAATTTTCTTGGCAACAACTCCTCTATCTCTAGTTGTGCTACAGCAATTGAGTTAGTAATTTTGCGCTGGTTATGCTCTATATTTTTGCAACATTCATGTTCCAAGCGCCAGTTTTCCTGGGAGCCTCTTGCAATCCTTCATCAATTACTGCACACAACAGTTGAAGCTATGATCGAACTCATGAACTCTTGGGCAAAATTCCCAACTTTACTAGGATTTGATGACAAATGAAATAGGTGAAAACTATGTCTACTAGAATATAGAATTGGATAATGAAATACTAGTATGATGATGTAAAGGAGAAGTTACAAGGAAGCTGCATATGAAGAAAGCTTAGTTTATTAAGTGTCTTGATGGACATTCATCACAACAAAACATTAAAATCCAAAACTGAAAAGGCTTCCTACTAGCTTCAAAAAAACTCATAAAGGGGGGGAAATATATGAAGATGGAAAAAAGAAAAAAGATAACACGATGTTTCTATGCTCCTCCCTTGAGCAAAGTGAGGGCTTCAGATGCAGTAGGCAAAGCTGGGATTGCTCCTTTCTTGGTTGTAGTGATGGCTCCACATGCACATGAAAACCTAAGTACTTCCTTCAACCTTGCTTCATCCTGCATTTTTTTTTCCACACAAATTAGTATATTATACGACACGTTATCGCTTAAATTAGTTCTAAGAAAAGGTAATTATTTTACCTCGAGAATGGTTTGATCATCAACAATCTTGGTTAGAAGGGCACCAACAAAAGAATCACCAGCTCCAGTGGTGTCAACAGTCTTCACATGGAATCCTCCAACGGTTCCATGGAATTTCTACACCCCAAAAAAGAACTAAGTCAGATCAAATTATCAAAACCAATTACACAATATTCTCTATTCTAATTTAAAAAATAAACGCCTTTATTAGGCATGAGGGGACACACTAATTTAGTGTTGTAGGTCCTCCTTGGCTTACTTTAATTACAAATTAAACAACAATGGTTCGTCTAAGTTGTTCTTACCTACCACTTTACAGCTATCTACTAGAGAATTCAATAATAAGCAATTAAATAAAATAGGAACGATTACGAGTATAAAAATTATTTAAAAAACGAAATACCAAAAGATAGAATATACCTTGGTGTAGTAATTGCAACCCTTTTCACCAAGAGTGACCAAGAGTAGCTTCAAGTTAGGATGCCACAAGGACATGGCGGATTCATCATCAATCTTGTTGCTTCCAGTGAGGAATTCGAGCTCCACATCGCTGACCTTGATCACATCAGCAGAGTCCCATATGCTCTTGATTTGCTTCTTGGCCTCTTCTGCTGAAGGCCACAACGGCAAACGAAGGTTTGGGTCATAAGAGAGCAATGCCCCTGCCTCCTTTGCTACTTCCATTGCCTTCATATGTGCTGCTCTACATGGCTCCACGATCAAACTAATTGATCCATAGTGGAACACCTTAGCCTATATACACAAAATTCACAAATTAAACTATAATCCATACAAAAATTAATTAGTTTGTGAGCTACAATTAATGACTGACTCCATGATAATGACACCTGACATGAATTTAACTATACTTCCCCACCTACCCCTTTTGGCTCCACTCGATTTCGATACACTCTATACTATTCCTCCTAGTATGTATCGTCATTATACACTTTTTTCCGTGAAGCTAGAATTTTCGCTTGATTCAAAATATGAAAAAATAAACACATAAACTACCCATTTGAATGCAAACAAATCAATTTGGTTTTGTAGCAAATATCATGTGAACTAAAAATCTACAATATAAGAGGCAAGTGGGAACAAAAGAGAAAGAGACAAAGCATAGGTTTTTGAGATTTCAACACATGAAAGGCAGGAAAAGTTGTGTTAAGCTAACAGACAACACTCACCCACTCTTCAAGAAAAATCCGTGTCACTTACACCTTCATCTTAATTGCATGCAACACAATAATTCCTAATTTTATCTCTAACTAAAATCCTAAGTGACAAAATTCTAGCTGTCTCTCTTTAAACAAACAAAATTTTAAAAAAGTGGATAGGGATCACCTTTTACTTACAAAAGCGAAATCGCTATTGAAATGGATGTGTGGGCATACTAAGCGATTCCGGATCGGATCCAAAAAAATGATACGTTGTTAATTAGAAAAATGACAGTAAAGTCGAAAAAAAAAAAGACACCAAACCAACCCACCTAAAAATAAAAATAAGTTTTACGTCTTTTTCAATTTATTAATTAATTACTACAGTTGAGTCAAAAACAAACAACAACA</genome_strand>
        <mrna_strand>TCTTCCACTCATTTCATTGTCTATATTCTTCTTCTTTTCTACTTTCTCCTCCCATTTTTCCCATTACAAACACTACATTTTTCTGTTTTTGATTGAAAGTTTTCATTTTTAGTATTTTGGACTAAATCACCTGCTTTGGGTTTTCTTGATTTTTGCAGGGTTTTTCTTTTTTGTCTGACTGACCCTTTTGGGGGTATTTTCGAATCTTGAAAAGTTCTGAGTTCTCTTCATAAAAAGCTTCAAGACACTATTTTTTCAATTTTTCTTGTGTGAAACTCAAATGGGTATGTCTTGAATTAGTGTTAGGAGGCAAAGAGTTAAGTAATAAAAGATAAAAAGATGAAGATACAGTGTGATGTGTGTGAGAAAGCTCAAGCTACTGTGATTTGCTGTGCTGATGAGGCTGCTCTGTGTGCAAAATGTGATATTGAAGTTCATGCTGCTAATAAATTAGCAAGCAAGCACCAAAGGCTTCATCTTCAGTGCCTATCTAACAAGCTTCCTCCTTGTGATATTTGCCAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATAAAGCAGCCTTCATCTTCTGTGTTGAGGATAGAGCTCTCTTTTGCAAGGACTGTGACGAAGCAATTCATTCAGCCAGCAGCCTCGCTAAGAACCACCAACGCTTCTTAGCCACTGGAATCCGTGTAGCCTTGAGCTCAAGCTGTAATAAGGAATCAGTAAAAAACCAACTGCAGCCACAACCACCTCAGCAGAATTCCCAACAAGTTGGCTTGAAAATGCCTCCACAGCAGTTGTCCTGTATAACATCACCATCTTGGCCTGTCGATGATTTACTAGGATTTCCAGATTATGAGTCGAGTGACAAG............................................................................................................................................................................................................................................................................................................................................................................................AAGGATCTACTTGAGCTTGGTGAATTTGAGTGGTTAGGGGGCATTGATCTCTTTGGTGAACAAACAGCAGCTGAAGTGCCCGAGCTATCAGTACCTCAGTCGAGCAATACAAATATTTACAGGACAACCAAATATCAAATGCCTTACAAGAAGTCCAGAATTGAAATCCCAGATGATGATGAGTATTTTACTGTCCCCGATCTTGGTTGAACTCCAACTTCAAGAAGTTTCCAATTAAATGTGCATGTGTGCTTGTGTGTAGTACTTAATCAGTGCTCTCATACTGTCAACAGATATGTTCAGTAAGTAGAAAAAGTATTGTTCTGCTTAAGATACTCCTTATCTTGCTTACTTTCGCAGTGCGCTCATATTGTCAACAGACATGTTCAGTAAGTAGAGGAAACACTATTCTGCTTAAGATATCCTTTATCTTGCTTAAAAAAAAAAAAAAAAAAAGAATTGCATCAATTTTTTCTTCTTATAGCAATTTTATAAACATATTGATGCATTCTTGGACATGCTATGCATATTGCTACATAGTAAAATCTGGTTTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAAAAAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0117B06-OI86t/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U334622" ref_strand="+" ref_description="SGN-U334622        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: | Symbol: None | zinc finger (B-box type) family protein / salt-tolerance protein (STO), identical to SP:Q96288 Salt-tolerance protein (Arabidopsis thaliana); contains Pfam profile PF00643: B-box zinc finger | chr1:1828412-1829889 REVERSE | Aliases: None(evalue: 2e-26, score=117) genbank/nr: gi|76160970|gb|ABA40448.1| fructokinase 2-like protein [Solanum tuberosum] (evalue: 3e-30, score=135)">
      <seq>ctactttctcctcccatttttcccattacaaacactacatttttctgtttttgattgaaagttttcatttttagtattttggactaaatcacctgctttgggttttcttgatttttgcagggtttttcttttttgtctgactgacccttttgggggtattttcgaatcttgaaaagttctgagttctcttcataaaaagcttcaagacactattttttcaatttttcttgtgtgaaactcaaatgggtatgtcttgaattagtgttaggaggcaaagagttaagtaataaaagataaaaagatgaagatacagtgtgatgtgtgtgagaaagctcaagctactgtgatttgctgtgctgatgaggctgctctgtgtgcaaaatgtgatattgaagttcatgctgctaataaattagcaagcaagcaccaaaggcttcatcttcagtgcctatctaacaagcttcctccttgtgatatttgccaagtaagggaacttcttctttttgttgccctgttcatggaataatttgtttttagtctagattgtgttactaatatttcaatgtggtagttgtgttgctccttgattaatggaaagttaacttgtgtaccctcccactggtttgggctttggactttcaacatggaagtctgaagtgccttctgggtcaatctcagtgcaccggacttgcctagtgctaattacatcttccatgtggtttgcaagctattatataggaacggggtttgcaagctgttaaataagagcggggttagcccctatgcgcactcaagggcagcggctgcgggtttccttgtcataaaaaaagttggaaagttaacttgtgatgttccttttgattaaactctgatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0117B06-OI86t/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0117B06.1" temp_strand="+" temp_description="C06HBa0117B06.1  AC211048.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0117B06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="25972" stop="27445"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26272" g_stop="27145" g_length="874"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="874" r_length="874" r_score="0.999"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0117B06.1" gen_strand="+" ref_id="SGN-U334622" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>874</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0117B06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U334622" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26272" e_stop="27145"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTACTTTCTCCTCCCATTTTTCCCATTACAAACACTACATTTTTCTGTTTTTGATTGAAAGTTTTCATTTTTAGTATTTTGGACTAAATCACCTGCTTTGGGTTTTCTTGATTTTTGCAGGGTTTTTCTTTTTTGTCTGACTGACCCTTTTGGGGGTATTTTCGAATCTTGAAAAGTTCTGAGTTCTCTTCATAAAAAGCTTCAAGACACTATTTTTTCAATTTTTCTTGTGTGAAACTCAAATGGGTATGTCTTGAATTAGTGTTAGGAGGCAAAGAGTTAAGTAATAAAAGATAAAAAGATGAAGATACAGTGTGATGTGTGTGAGAAAGCTCAAGCTACTGTGATTTGCTGTGCTGATGAGGCTGCTCTGTGTGCAAAATGTGATATTGAAGTTCATGCTGCTAATAAATTAGCAAGCAAGCACCAAAGGCTTCATCTTCAGTGCCTATCTAACAAGCTTCCTCCTTGTGATATTTGCCAAGTAAGGGAACTTCTTCTTTTTGTTGCCCTGTTCATGGAATAATTTGTTTTTAGTCTAGATTGTGTTACTAATATTTCAATGTGGTAGTTGTGTTGCTCCTTGATTAATGGAAAGTTAACTTGTGTACCCTCCCACTGGTTTGGGCTTTGGACTTTCAACATGGAAGTCTGAAGTGCCTTCTGGGTCAATCTCAGTGCACCGGACTTGCCTAGTGCTAATTACATCTTCCATGTGGTTTGCAAGCTATTATATAGGAACGGGGTTTGCAAGCTGTTAAATAAGAGCGGGGTTAGCCCCTATGCGCACTCAAGGGCAGCGGCTGCGGGTTTCCTTGTCATAAAAAAAGTTGGAAAGTTAACTTGTGATGTTCCTTTTGATTAGACTCTGATT</genome_strand>
        <mrna_strand>CTACTTTCTCCTCCCATTTTTCCCATTACAAACACTACATTTTTCTGTTTTTGATTGAAAGTTTTCATTTTTAGTATTTTGGACTAAATCACCTGCTTTGGGTTTTCTTGATTTTTGCAGGGTTTTTCTTTTTTGTCTGACTGACCCTTTTGGGGGTATTTTCGAATCTTGAAAAGTTCTGAGTTCTCTTCATAAAAAGCTTCAAGACACTATTTTTTCAATTTTTCTTGTGTGAAACTCAAATGGGTATGTCTTGAATTAGTGTTAGGAGGCAAAGAGTTAAGTAATAAAAGATAAAAAGATGAAGATACAGTGTGATGTGTGTGAGAAAGCTCAAGCTACTGTGATTTGCTGTGCTGATGAGGCTGCTCTGTGTGCAAAATGTGATATTGAAGTTCATGCTGCTAATAAATTAGCAAGCAAGCACCAAAGGCTTCATCTTCAGTGCCTATCTAACAAGCTTCCTCCTTGTGATATTTGCCAAGTAAGGGAACTTCTTCTTTTTGTTGCCCTGTTCATGGAATAATTTGTTTTTAGTCTAGATTGTGTTACTAATATTTCAATGTGGTAGTTGTGTTGCTCCTTGATTAATGGAAAGTTAACTTGTGTACCCTCCCACTGGTTTGGGCTTTGGACTTTCAACATGGAAGTCTGAAGTGCCTTCTGGGTCAATCTCAGTGCACCGGACTTGCCTAGTGCTAATTACATCTTCCATGTGGTTTGCAAGCTATTATATAGGAACGGGGTTTGCAAGCTGTTAAATAAGAGCGGGGTTAGCCCCTATGCGCACTCAAGGGCAGCGGCTGCGGGTTTCCTTGTCATAAAAAAAGTTGGAAAGTTAACTTGTGATGTTCCTTTTGATTAAACTCTGATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0117B06-OI86t/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U334620" ref_strand="+" ref_description="SGN-U334620        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: | Symbol: None | zinc finger (B-box type) family protein / salt-tolerance protein (STO), identical to SP:Q96288 Salt-tolerance protein (Arabidopsis thaliana); contains Pfam profile PF00643: B-box zinc finger | chr1:1828412-1829889 REVERSE | Aliases: None(evalue: 3e-22, score=95.9) genbank/nr: CONSTANS(evalue: 2e-71, score=170)">
      <seq>ggaatcagtaaaaaaccaactgcagccacaaccacctccttgtgatatttgccaagataaagcagccttcatcttctgtgttgaggatagagctctcttttgcaaggactgtgacgaagcaattcattcagccagcagcctcgctaagaaccaccaacgcttcttagccactggaatccgtgtagccttgagctcaagctgtaataaggaatcagttgtcctgtataacatcaccatcttggcctgtcgatgatttactaggatttccagattatgagtcgagtgacaagaaggatctacttgagcttggtgaatttgagtggttagggggcattgatctctttggtgaacaaacagcagctgaagtgcccgagctatcagtacctcagtcgagcaatacaaatatttacaggacaaccaaatatcaaatgccttacaagaagtccagaattgaaatcccagatgatgatgagtattttactgtccccgatcttggttgaactccaacttcaagaagtttccaattaaatgtgcatgtgtgcttgtgtgtagtacttaatcagtgctctcatactgtcaacagatatgttcagtaagtagaaaaagtattgttctgcttaagatactccttatcttgcttactttcgcagtgcgctcatattgtcaacagacatgttcagtaagtagaggaaacactattctgcttaagatatcctttatcttgcttaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0117B06-OI86t/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0117B06.1" temp_strand="+" temp_description="C06HBa0117B06.1  AC211048.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0117B06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="27952" stop="29694"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28266" g_stop="28422" g_length="157"/>
          <reference_exon_boundary r_type="cDNA" r_start="56" r_stop="212" r_length="157" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="28423" i_stop="28496" i_length="74">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28497" g_stop="28574" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="213" r_stop="290" r_length="78" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="28575" i_stop="28954" i_length="380">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="28955" g_stop="29393" g_length="439"/>
          <reference_exon_boundary r_type="cDNA" r_start="291" r_stop="729" r_length="439" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="730" polyA_stop="740"/>
      <MATCH_line gen_id="C06HBa0117B06.1" gen_strand="+" ref_id="SGN-U334620" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>674</cumulative_length_of_scored_exons>
        <coverage percentage="0.911" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0117B06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U334620" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28266" e_stop="28422"/>
          <exon e_start="28497" e_stop="28574"/>
          <exon e_start="28955" e_stop="29393"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATAAAGCAGCCTTCATCTTCTGTGTTGAGGATAGAGCTCTCTTTTGCAAGGACTGTGACGAAGCAATTCATTCAGCCAGCAGCCTCGCTAAGAACCACCAACGCTTCTTAGCCACTGGAATCCGTGTAGCCTTGAGCTCAAGCTGTAATAAGGAATCAGTAAAAAACCAACTGCAGCCACAACCACCTCAGCAGAATTCCCAACAAGTTGGCTTGAAAATGCCTCCACAGCAGTTGTCCTGTATAACATCACCATCTTGGCCTGTCGATGATTTACTAGGATTTCCAGATTATGAGTCGAGTGACAAGGTAATACAAACTTATTCCTTTCATTTTGCAAGTATCCTATATTTTCTACCACTTGGGTTGGTGGCTGGCGGATTGACGTATAGAGGACTTCTCTAGATGAGAAGCTATCGATTTTCTTGGTAATGCAGCTTATGCATAGCATTGAACTTGAATTTGAAACACTCAAATATGCAAAACGACTTCCTTAGATTCCTCGATACATAGGGAGACATTTTATGACACCATTACATGTATATACGAAGTTGGCCTTGGGTATATTCCGGTGTCAGTCTAATATGTGAAACTGTGGTGACCATTGATTCAGTATATTACGGTGTCATTGTCTGTTCATCTAATATGTAATGAATAACCTATATATTGGTTGTTTCAATCTAATACAGAAGGATCTACTTGAGCTTGGTGAATTTGAGTGGTTAGGGGGCATTGATCTCTTTGGTGAACAAACAGCAGCTGAAGTGCCCGAGCTATCAGTACCTCAGTCGAGCAATACAAATATTTACAGGACAACCAAATATCAAATGCCTTACAAGAAGTCCAGAATTGAAATCCCAGATGATGATGAGTATTTTACTGTCCCCGATCTTGGTTGAACTCCAACTTCAAGAAGTTTCCAATTAAATGTGCATGTGTGCTTGTGTGTAGTACTTAATCAGTGCTCTCATACTGTCAACAGATATGTTCAGTAAGTAGAAAAAGTATTGTTCTGCTTAAGATACTCCTTATCTTGCTTACTTTCGCAGTGCGCTCATATTGTCAACAGACATGTTCAGTAAGTAGAGGAAACACTATTCTGCTTAAGATATCCTTTATCTTGCTTAC</genome_strand>
        <mrna_strand>GATAAAGCAGCCTTCATCTTCTGTGTTGAGGATAGAGCTCTCTTTTGCAAGGACTGTGACGAAGCAATTCATTCAGCCAGCAGCCTCGCTAAGAACCACCAACGCTTCTTAGCCACTGGAATCCGTGTAGCCTTGAGCTCAAGCTGTAATAAGGAAT..........................................................................CAGTTGTCCTGTATAACATCACCATCTTGGCCTGTCGATGATTTACTAGGATTTCCAGATTATGAGTCGAGTGACAAG............................................................................................................................................................................................................................................................................................................................................................................................AAGGATCTACTTGAGCTTGGTGAATTTGAGTGGTTAGGGGGCATTGATCTCTTTGGTGAACAAACAGCAGCTGAAGTGCCCGAGCTATCAGTACCTCAGTCGAGCAATACAAATATTTACAGGACAACCAAATATCAAATGCCTTACAAGAAGTCCAGAATTGAAATCCCAGATGATGATGAGTATTTTACTGTCCCCGATCTTGGTTGAACTCCAACTTCAAGAAGTTTCCAATTAAATGTGCATGTGTGCTTGTGTGTAGTACTTAATCAGTGCTCTCATACTGTCAACAGATATGTTCAGTAAGTAGAAAAAGTATTGTTCTGCTTAAGATACTCCTTATCTTGCTTACTTTCGCAGTGCGCTCATATTGTCAACAGACATGTTCAGTAAGTAGAGGAAACACTATTCTGCTTAAGATATCCTTTATCTTGCTTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0117B06-OI86t/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U313842" ref_strand="+" ref_description="SGN-U313842        Tomato 200607 #1 [5 ESTs aligned] arabidopsis/peptide: | Symbol: None | zinc finger (B-box type) family protein / salt-tolerance protein (STO), identical to SP:Q96288 Salt-tolerance protein (Arabidopsis thaliana); contains Pfam profile PF00643: B-box zinc finger | chr1:1828412-1829889 REVERSE | Aliases: T21E18.9, T21E18_9(evalue: 3e-18, score=88.2) genbank/nr: CONSTANS(evalue: 7e-56, score=218)">
      <seq>ctgtgacgaagcaattcattcagccagcagcctcgctaagaaccaccaacgcttcttagccactggaatccgtgtagccttgaaaatgcctccacagcagttgtcctgtataacatcaccatcttggcctgtcgatgatttactaggatttccagattatgagtcgagtgacaagaaggatctacttgagcttggtgaatttgagtggttagggggcattgatctctttggtgaacaaacagcagctgaagtgcccgagctatcagtacctcagtcgagcaatacaaatatttacaggacaaccaaatatcaaatgccttacaagaagtccagaattgaaatcccagatgatgatgagtattttactgtccccgatcttggttgaactccaacttcaagaagtttccaattaaatgtgcatgtgtgcttgtgtgtagtacttaatcagtgctctcatactgtcaacagatatgttcagtaagtagaaaaagtattgttctgcttaagataaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0117B06-OI86t/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0117B06.1" temp_strand="+" temp_description="C06HBa0117B06.1  AC211048.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0117B06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="28019" stop="124721"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28319" g_stop="28391" g_length="73"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="73" r_length="73" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="28392" i_stop="28472" i_length="81">
            <donor d_prob="0.900" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28473" g_stop="28574" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="74" r_stop="175" r_length="102" r_score="0.980"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="28575" i_stop="28954" i_length="380">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="28955" g_stop="29286" g_length="332"/>
          <reference_exon_boundary r_type="cDNA" r_start="176" r_stop="507" r_length="332" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="29287" i_stop="30013" i_length="727">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="30014" g_stop="30034" g_length="21"/>
          <reference_exon_boundary r_type="cDNA" r_start="508" r_stop="528" r_length="21" r_score="0.762"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0117B06.1" gen_strand="+" ref_id="SGN-U313842" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>528</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0117B06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U313842" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28319" e_stop="28391"/>
          <exon e_start="28473" e_stop="28574"/>
          <exon e_start="28955" e_stop="29286"/>
          <exon e_start="30014" e_stop="30034"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGTGACGAAGCAATTCATTCAGCCAGCAGCCTCGCTAAGAACCACCAACGCTTCTTAGCCACTGGAATCCGTGTAGCCTTGAGCTCAAGCTGTAATAAGGAATCAGTAAAAAACCAACTGCAGCCACAACCACCTCAGCAGAATTCCCAACAAGTTGGCTTGAAAATGCCTCCACAGCAGTTGTCCTGTATAACATCACCATCTTGGCCTGTCGATGATTTACTAGGATTTCCAGATTATGAGTCGAGTGACAAGGTAATACAAACTTATTCCTTTCATTTTGCAAGTATCCTATATTTTCTACCACTTGGGTTGGTGGCTGGCGGATTGACGTATAGAGGACTTCTCTAGATGAGAAGCTATCGATTTTCTTGGTAATGCAGCTTATGCATAGCATTGAACTTGAATTTGAAACACTCAAATATGCAAAACGACTTCCTTAGATTCCTCGATACATAGGGAGACATTTTATGACACCATTACATGTATATACGAAGTTGGCCTTGGGTATATTCCGGTGTCAGTCTAATATGTGAAACTGTGGTGACCATTGATTCAGTATATTACGGTGTCATTGTCTGTTCATCTAATATGTAATGAATAACCTATATATTGGTTGTTTCAATCTAATACAGAAGGATCTACTTGAGCTTGGTGAATTTGAGTGGTTAGGGGGCATTGATCTCTTTGGTGAACAAACAGCAGCTGAAGTGCCCGAGCTATCAGTACCTCAGTCGAGCAATACAAATATTTACAGGACAACCAAATATCAAATGCCTTACAAGAAGTCCAGAATTGAAATCCCAGATGATGATGAGTATTTTACTGTCCCCGATCTTGGTTGAACTCCAACTTCAAGAAGTTTCCAATTAAATGTGCATGTGTGCTTGTGTGTAGTACTTAATCAGTGCTCTCATACTGTCAACAGATATGTTCAGTAAGTAGAAAAAGTATTGTTCTGCTTAAGATACTCCTTATCTTGCTTACTTTCGCAGTGCGCTCATATTGTCAACAGACATGTTCAGTAAGTAGAGGAAACACTATTCTGCTTAAGATATCCTTTATCTTGCTTACATTTCGCCTCCTTGGTAGAATTGCATCAATTTCTTCTTCTTATAGCAATTTTATAAACATATTGATGCATTCTTGGACATGCTATGCATATTGCTACATAGTAAAATCTGGTTTTGTTACAAGAACTACTCCACAGTTGTGATTTTACCTTGTAGACTCTACCCTAGGAACAAATTTTCTTGGCAACAACTCCTCTATCTCTAGTTGTGCTACAGCAATTGAGTTAGTAATTTTGCGCTGGTTATGCTCTATATTTTTGCAACATTCATGTTCCAAGCGCCAGTTTTCCTGGGAGCCTCTTGCAATCCTTCATCAATTACTGCACACAACAGTTGAAGCTATGATCGAACTCATGAACTCTTGGGCAAAATTCCCAACTTTACTAGGATTTGATGACAAATGAAATAGGTGAAAACTATGTCTACTAGAATATAGAATTGGATAATGAAATACTAGTATGATGATGTAAAGGAGAAGTTACAAGGAAGCTGCATATGAAGAAAGCTTAGTTTATTAAGTGTCTTGATGGACATTCATCACAACAAAACATTAAAATCCAAAACTGAAAAGGCTTCCTACTAGCTTCAAAAAAACTCATAAAGGGGGGGAAATATATGAAGATGGAAAAAAGAAAAAAGATA</genome_strand>
        <mrna_strand>CTGTGACGAAGCAATTCATTCAGCCAGCAGCCTCGCTAAGAACCACCAACGCTTCTTAGCCACTGGAATCCGT.................................................................................GTAGCCTTGAAAATGCCTCCACAGCAGTTGTCCTGTATAACATCACCATCTTGGCCTGTCGATGATTTACTAGGATTTCCAGATTATGAGTCGAGTGACAAG............................................................................................................................................................................................................................................................................................................................................................................................AAGGATCTACTTGAGCTTGGTGAATTTGAGTGGTTAGGGGGCATTGATCTCTTTGGTGAACAAACAGCAGCTGAAGTGCCCGAGCTATCAGTACCTCAGTCGAGCAATACAAATATTTACAGGACAACCAAATATCAAATGCCTTACAAGAAGTCCAGAATTGAAATCCCAGATGATGATGAGTATTTTACTGTCCCCGATCTTGGTTGAACTCCAACTTCAAGAAGTTTCCAATTAAATGTGCATGTGTGCTTGTGTGTAGTACTTAATCAGTGCTCTCATACTGTCAACAGATATGTTCAGTAAGTAGAAAAAGTATTGTTCTGCTTAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0117B06-OI86t/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U334623" ref_strand="+" ref_description="SGN-U334623        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: | Symbol: None | zinc finger (B-box type) family protein / salt-tolerance protein (STO), identical to SP:Q96288 Salt-tolerance protein (Arabidopsis thaliana); contains Pfam profile PF00643: B-box zinc finger | chr1:1828412-1829889 REVERSE | Aliases: T21E18.9, T21E18_9(evalue: 3e-05, score=45.8) genbank/nr: CONSTANS(evalue: 2e-24, score=115)">
      <seq>ttttttttttttttttttaagcagaacaatactttttctacttactgaacatatctgttgacagtatgagagcactgattaagtactacacacaagcacacatgcacatttaattggaaacttcttgaagttggagttcaaccaagatcggggacagtaaaatactcatcatcatctgggatttcaattctggacttcttgtaaggcatttgatatttggttgtcctgtaaatatttgtattgctcgactgaggtactgatagctcgggcacttcagctgctgtttgttcaccaaagagatcaatgccccctaaccactcaaattcaccaagctcaagtagatccttctgtattaaattgaaacaaccaatatataggttattcattacatattaaatgaacagacaatgacaccgtaatatactgaatcaatggtcaccacagtttcacatattaaactgacaccggaatatacccaaggccaacttcgtatatacatgtaatggtgtcataaaatgtctccctatgtatcgaggaatctaaggaagtcgttttgcatatttgagtgtttcaaattcaagttcaatgctatgcataagctgcattaccaagaaaatcgatagcttctcatctagagaagtcctctatacgtcaatccgccagccaccaacccaagtggtagaaaatataggatacttgcaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0117B06-OI86t/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0117B06.1" temp_strand="-" temp_description="C06HBa0117B06.1  AC211048.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0117B06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="124721" stop="28299"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30029" g_stop="30018" g_length="12"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="12" r_length="12" r_score="0.917"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="30017" i_stop="29290" i_length="728">
            <donor d_prob="0.000" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29289" g_stop="28599" g_length="691"/>
          <reference_exon_boundary r_type="cDNA" r_start="13" r_stop="703" r_length="691" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0117B06.1" gen_strand="-" ref_id="SGN-U334623" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>703</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0117B06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U334623" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30029" e_stop="30018"/>
          <exon e_start="29289" e_stop="28599"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTTCTTTTTTCCATCTTCATATATTTCCCCCCCTTTATGAGTTTTTTTGAAGCTAGTAGGAAGCCTTTTCAGTTTTGGATTTTAATGTTTTGTTGTGATGAATGTCCATCAAGACACTTAATAAACTAAGCTTTCTTCATATGCAGCTTCCTTGTAACTTCTCCTTTACATCATCATACTAGTATTTCATTATCCAATTCTATATTCTAGTAGACATAGTTTTCACCTATTTCATTTGTCATCAAATCCTAGTAAAGTTGGGAATTTTGCCCAAGAGTTCATGAGTTCGATCATAGCTTCAACTGTTGTGTGCAGTAATTGATGAAGGATTGCAAGAGGCTCCCAGGAAAACTGGCGCTTGGAACATGAATGTTGCAAAAATATAGAGCATAACCAGCGCAAAATTACTAACTCAATTGCTGTAGCACAACTAGAGATAGAGGAGTTGTTGCCAAGAAAATTTGTTCCTAGGGTAGAGTCTACAAGGTAAAATCACAACTGTGGAGTAGTTCTTGTAACAAAACCAGATTTTACTATGTAGCAATATGCATAGCATGTCCAAGAATGCATCAATATGTTTATAAAATTGCTATAAGAAGAAGAAATTGATGCAATTCTACCAAGGAGGCGAAATGTAAGCAAGATAAAGGATATCTTAAGCAGAATAGTGTTTCCTCTACTTACTGAACATGTCTGTTGACAATATGAGCGCACTGCGAAAGTAAGCAAGATAAGGAGTATCTTAAGCAGAACAATACTTTTTCTACTTACTGAACATATCTGTTGACAGTATGAGAGCACTGATTAAGTACTACACACAAGCACACATGCACATTTAATTGGAAACTTCTTGAAGTTGGAGTTCAACCAAGATCGGGGACAGTAAAATACTCATCATCATCTGGGATTTCAATTCTGGACTTCTTGTAAGGCATTTGATATTTGGTTGTCCTGTAAATATTTGTATTGCTCGACTGAGGTACTGATAGCTCGGGCACTTCAGCTGCTGTTTGTTCACCAAAGAGATCAATGCCCCCTAACCACTCAAATTCACCAAGCTCAAGTAGATCCTTCTGTATTAGATTGAAACAACCAATATATAGGTTATTCATTACATATTAGATGAACAGACAATGACACCGTAATATACTGAATCAATGGTCACCACAGTTTCACATATTAGACTGACACCGGAATATACCCAAGGCCAACTTCGTATATACATGTAATGGTGTCATAAAATGTCTCCCTATGTATCGAGGAATCTAAGGAAGTCGTTTTGCATATTTGAGTGTTTCAAATTCAAGTTCAATGCTATGCATAAGCTGCATTACCAAGAAAATCGATAGCTTCTCATCTAGAGAAGTCCTCTATACGTCAATCCGCCAGCCACCAACCCAAGTGGTAGAAAATATAGGATACTTGCAAA</genome_strand>
        <mrna_strand>TTTTTTTTTTTT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTTAAGCAGAACAATACTTTTTCTACTTACTGAACATATCTGTTGACAGTATGAGAGCACTGATTAAGTACTACACACAAGCACACATGCACATTTAATTGGAAACTTCTTGAAGTTGGAGTTCAACCAAGATCGGGGACAGTAAAATACTCATCATCATCTGGGATTTCAATTCTGGACTTCTTGTAAGGCATTTGATATTTGGTTGTCCTGTAAATATTTGTATTGCTCGACTGAGGTACTGATAGCTCGGGCACTTCAGCTGCTGTTTGTTCACCAAAGAGATCAATGCCCCCTAACCACTCAAATTCACCAAGCTCAAGTAGATCCTTCTGTATTAAATTGAAACAACCAATATATAGGTTATTCATTACATATTAAATGAACAGACAATGACACCGTAATATACTGAATCAATGGTCACCACAGTTTCACATATTAAACTGACACCGGAATATACCCAAGGCCAACTTCGTATATACATGTAATGGTGTCATAAAATGTCTCCCTATGTATCGAGGAATCTAAGGAAGTCGTTTTGCATATTTGAGTGTTTCAAATTCAAGTTCAATGCTATGCATAAGCTGCATTACCAAGAAAATCGATAGCTTCTCATCTAGAGAAGTCCTCTATACGTCAATCCGCCAGCCACCAACCCAAGTGGTAGAAAATATAGGATACTTGCAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0117B06-OI86t/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U313491" ref_strand="+" ref_description="SGN-U313491        Tomato 200607 #1 [84 ESTs aligned] arabidopsis/peptide: | Symbol: None | pfkB-type carbohydrate kinase family protein, contains Pfam profile: PF00294 pfkB family carbohydrate kinase | chr3:21993998-21995572 FORWARD | Aliases: T16L24.30(evalue: 1e-153, score=540) genbank/nr: gi|1915974|gb|AAB51108.1| fructokinase [Lycopersicon esculentum] gi|2102693|gb|AAB57734.1| fructokinase(evalue: 0, score=645)">
      <seq>ttctatataaagctccttataattttcacttatcctcctcttcttctctctgttatactatataaaaatctatagatacacctatagatacatatattttctctattcatcgtagccatggcagttaacggtgcttcttcttctggtttgatcgtcagtttcggtgagatgttgatcgatttcgttccgacagtctccggcgtatcccttgccgaggctcccggatttttgaaagctcccggcggtgcaccggcgaacgtcgctatcgcggtgacgaggctcggagggaagtcggcgttcgtcgggaaactcggcgacgatgagttcggtcacatgctcgccgggattctgaaaacgaacggcgtacaagccgaaggaattaattttgacaagggcgccaggacggctttggcgttcgtgacgctacgcgccgacggagagcgtgagtttatgttttacagaaatcccagtgccgatatgttgctcacgcccgctgagttgaatcttgatcttattagatctgctaaggtgttccactatggatcaattagtttgatcgtggagccatgtagagcagcacatatgaaggcaatggaagtagcaaaggaggcaggggcattgctctcttatgacccaaaccttcgtttgccgttgtggccttcagcagaagaggccaagaagcaaatcaagagcatatgggactctgctgatgtgatcaaggtcagcgatgtggagctcgaattcctcactggaagcaacaagattgatgatgaatccgccatgtccttgtggcatcctaacttgaagctactcttggtcactcttggtgaaaagggttgcaattactacaccaagaaattccatggaaccgttggaggattccatgtgaagactgttgacaccactggagctggtgattcttttgttggtgcccttctaaccaagattgttgatgatcaaaccattctcgaggatgaagcaaggttgaaggaagtacttaggttttcatgtgcatgtggagccatcactacaaccaagaaaggagcaatcccagctttgcctactgcatctgaagccctcactttgctcaagggaggagcatagaaacatcgtgttatcttttttcttttttccatcttcatatatttccccccctttatgagtttttttgaagctagtaggaagccttttcagttttggattttaatgttttgttgtgatgaatgtccatcaagacacttaataaactaagctttcttcaaaaaaaaaaaaaaaaaaacttctcctttacatcatcatactagtatttcattatccaattctatattctagtagacatagttttcacctatttcatttgtcatcaaatcctagtaaagttgggaattttgcccaagagttaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0117B06-OI86t/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0117B06.1" temp_strand="-" temp_description="C06HBa0117B06.1  AC211048.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0117B06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="32763" stop="29447"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="32463" g_stop="31942" g_length="522"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="522" r_length="522" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="31941" i_stop="31015" i_length="927">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.976" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="31014" g_stop="30682" g_length="333"/>
          <reference_exon_boundary r_type="cDNA" r_start="523" r_stop="855" r_length="333" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="30681" i_stop="30379" i_length="303">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="30378" g_stop="30262" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="856" r_stop="972" r_length="117" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="30261" i_stop="30178" i_length="84">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="30177" g_stop="29752" g_length="426"/>
          <reference_exon_boundary r_type="cDNA" r_start="973" r_stop="1398" r_length="426" r_score="0.967"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="1402" polyA_stop="1417"/>
      <MATCH_line gen_id="C06HBa0117B06.1" gen_strand="-" ref_id="SGN-U313491" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>1398</cumulative_length_of_scored_exons>
        <coverage percentage="0.987" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0117B06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U313491" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="32463" e_stop="31942"/>
          <exon e_start="31014" e_stop="30682"/>
          <exon e_start="30378" e_stop="30262"/>
          <exon e_start="30177" e_stop="29752"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCTATATAAAGCTCCTTATAATTTTCACTTATCCTCCTCTTCTTCTCTCTGTTATACTATATAAAAATCTATAGATACACCTATAGATACATATATTTTCTCTATTCATCGTAGCCATGGCAGTTAACGGTGCTTCTTCTTCTGGTTTGATCGTCAGTTTCGGTGAGATGTTGATCGATTTCGTTCCGACAGTCTCCGGCGTATCCCTTGCCGAGGCTCCCGGATTTTTGAAAGCTCCCGGCGGTGCACCGGCGAACGTCGCTATCGCGGTGACGAGGCTCGGAGGGAAGTCGGCGTTCGTCGGGAAACTCGGCGACGATGAGTTCGGTCACATGCTCGCCGGGATTCTGAAAACGAACGGCGTACAAGCCGAAGGAATTAATTTTGACAAGGGCGCCAGGACGGCTTTGGCGTTCGTGACGCTACGCGCCGACGGAGAGCGTGAGTTTATGTTTTACAGAAATCCCAGTGCCGATATGTTGCTCACGCCCGCTGAGTTGAATCTTGATCTTATTAGATCTGTAAGTTATTTAATCTGTTTTTTTCTTCCCAACTCGCATTGGATTTGATGATCTGTGCGTGTTTCTCACGTGCAATTTCGTAGTTTTGTGATCACGAAGAAGCTGGTGAGTTTGTTGTTGTTTGTTTTTGACTCAACTGTAGTAATTAATTAATAAATTGAAAAAGACGTAAAACTTATTTTTATTTTTAGGTGGGTTGGTTTGGTGTCTTTTTTTTTTTCGACTTTACTGTCATTTTTCTAATTAACAACGTATCATTTTTTTGGATCCGATCCGGAATCGCTTAGTATGCCCACACATCCATTTCAATAGCGATTTCGCTTTTGTAAGTAAAAGGTGATCCCTATCCACTTTTTTAAAATTTTGTTTGTTTAAAGAGAGACAGCTAGAATTTTGTCACTTAGGATTTTAGTTAGAGATAAAATTAGGAATTATTGTGTTGCATGCAATTAAGATGAAGGTGTAAGTGACACGGATTTTTCTTGAAGAGTGGGTGAGTGTTGTCTGTTAGCTTAACACAACTTTTCCTGCCTTTCATGTGTTGAAATCTCAAAAACCTATGCTTTGTCTCTTTCTCTTTTGTTCCCACTTGCCTCTTATATTGTAGATTTTTAGTTCACATGATATTTGCTACAAAACCAAATTGATTTGTTTGCATTCAAATGGGTAGTTTATGTGTTTATTTTTTCATATTTTGAATCAAGCGAAAATTCTAGCTTCACGGAAAAAAGTGTATAATGACGATACATACTAGGAGGAATAGTATAGAGTGTATCGAAATCGAGTGGAGCCAAAAGGGGTAGGTGGGGAAGTATAGTTAAATTCATGTCAGGTGTCATTATCATGGAGTCAGTCATTAATTGTAGCTCACAAACTAATTAATTTTTGTATGGATTATAGTTTAATTTGTGAATTTTGTGTATATAGGCTAAGGTGTTCCACTATGGATCAATTAGTTTGATCGTGGAGCCATGTAGAGCAGCACATATGAAGGCAATGGAAGTAGCAAAGGAGGCAGGGGCATTGCTCTCTTATGACCCAAACCTTCGTTTGCCGTTGTGGCCTTCAGCAGAAGAGGCCAAGAAGCAAATCAAGAGCATATGGGACTCTGCTGATGTGATCAAGGTCAGCGATGTGGAGCTCGAATTCCTCACTGGAAGCAACAAGATTGATGATGAATCCGCCATGTCCTTGTGGCATCCTAACTTGAAGCTACTCTTGGTCACTCTTGGTGAAAAGGGTTGCAATTACTACACCAAGGTATATTCTATCTTTTGGTATTTCGTTTTTTAAATAATTTTTATACTCGTAATCGTTCCTATTTTATTTAATTGCTTATTATTGAATTCTCTAGTAGATAGCTGTAAAGTGGTAGGTAAGAACAACTTAGACGAACCATTGTTGTTTAATTTGTAATTAAAGTAAGCCAAGGAGGACCTACAACACTAAATTAGTGTGTCCCCTCATGCCTAATAAAGGCGTTTATTTTTTAAATTAGAATAGAGAATATTGTGTAATTGGTTTTGATAATTTGATCTGACTTAGTTCTTTTTTGGGGTGTAGAAATTCCATGGAACCGTTGGAGGATTCCATGTGAAGACTGTTGACACCACTGGAGCTGGTGATTCTTTTGTTGGTGCCCTTCTAACCAAGATTGTTGATGATCAAACCATTCTCGAGGTAAAATAATTACCTTTTCTTAGAACTAATTTAAGCGATAACGTGTCGTATAATATACTAATTTGTGTGGAAAAAAAAATGCAGGATGAAGCAAGGTTGAAGGAAGTACTTAGGTTTTCATGTGCATGTGGAGCCATCACTACAACCAAGAAAGGAGCAATCCCAGCTTTGCCTACTGCATCTGAAGCCCTCACTTTGCTCAAGGGAGGAGCATAGAAACATCGTGTTATCTTTTTTCTTTTTTCCATCTTCATATATTTCCCCCCCTTTATGAGTTTTTTTGAAGCTAGTAGGAAGCCTTTTCAGTTTTGGATTTTAATGTTTTGTTGTGATGAATGTCCATCAAGACACTTAATAAACTAAGCTTTCTTCATATGCAGCTTCCTTGTAACTTCTCCTTTACATCATCATACTAGTATTTCATTATCCAATTCTATATTCTAGTAGACATAGTTTTCACCTATTTCATTTGTCATCAAATCCTAGTAAAGTTGGGAATTTTGCCCAAGA</genome_strand>
        <mrna_strand>TTCTATATAAAGCTCCTTATAATTTTCACTTATCCTCCTCTTCTTCTCTCTGTTATACTATATAAAAATCTATAGATACACCTATAGATACATATATTTTCTCTATTCATCGTAGCCATGGCAGTTAACGGTGCTTCTTCTTCTGGTTTGATCGTCAGTTTCGGTGAGATGTTGATCGATTTCGTTCCGACAGTCTCCGGCGTATCCCTTGCCGAGGCTCCCGGATTTTTGAAAGCTCCCGGCGGTGCACCGGCGAACGTCGCTATCGCGGTGACGAGGCTCGGAGGGAAGTCGGCGTTCGTCGGGAAACTCGGCGACGATGAGTTCGGTCACATGCTCGCCGGGATTCTGAAAACGAACGGCGTACAAGCCGAAGGAATTAATTTTGACAAGGGCGCCAGGACGGCTTTGGCGTTCGTGACGCTACGCGCCGACGGAGAGCGTGAGTTTATGTTTTACAGAAATCCCAGTGCCGATATGTTGCTCACGCCCGCTGAGTTGAATCTTGATCTTATTAGATCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTAAGGTGTTCCACTATGGATCAATTAGTTTGATCGTGGAGCCATGTAGAGCAGCACATATGAAGGCAATGGAAGTAGCAAAGGAGGCAGGGGCATTGCTCTCTTATGACCCAAACCTTCGTTTGCCGTTGTGGCCTTCAGCAGAAGAGGCCAAGAAGCAAATCAAGAGCATATGGGACTCTGCTGATGTGATCAAGGTCAGCGATGTGGAGCTCGAATTCCTCACTGGAAGCAACAAGATTGATGATGAATCCGCCATGTCCTTGTGGCATCCTAACTTGAAGCTACTCTTGGTCACTCTTGGTGAAAAGGGTTGCAATTACTACACCAAG...............................................................................................................................................................................................................................................................................................................AAATTCCATGGAACCGTTGGAGGATTCCATGTGAAGACTGTTGACACCACTGGAGCTGGTGATTCTTTTGTTGGTGCCCTTCTAACCAAGATTGTTGATGATCAAACCATTCTCGAG....................................................................................GATGAAGCAAGGTTGAAGGAAGTACTTAGGTTTTCATGTGCATGTGGAGCCATCACTACAACCAAGAAAGGAGCAATCCCAGCTTTGCCTACTGCATCTGAAGCCCTCACTTTGCTCAAGGGAGGAGCATAGAAACATCGTGTTATCTTTTTTCTTTTTTCCATCTTCATATATTTCCCCCCCTTTATGAGTTTTTTTGAAGCTAGTAGGAAGCCTTTTCAGTTTTGGATTTTAATGTTTTGTTGTGATGAATGTCCATCAAGACACTTAATAAACTAAGCTTTCTTCAAAAAAAAAAAAAAAAAAACTTCTCCTTTACATCATCATACTAGTATTTCATTATCCAATTCTATATTCTAGTAGACATAGTTTTCACCTATTTCATTTGTCATCAAATCCTAGTAAAGTTGGGAATTTTGCCCAAGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0117B06-OI86t/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U336130" ref_strand="+" ref_description="SGN-U336130        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: | Symbol: None | aminotransferase class I and II family protein, low similarity to Aromatic Aminotransferase from Pyrococcus horikoshii GP:14278621; contains Pfam profile PF00155 aminotransferase, classes I and II | chr4:16171697-16174681 REVERSE | Aliases: T16L1.170, T16L1_170(evalue: 2e-38, score=156) genbank/nr: Aminotransferases(evalue: 2e-37, score=159)">
      <seq>ttgcaacaccctctacggagaaaacttcttacaagacacaggtctcccgcaatgaaaacttagcgaaacttcaagctggttatctgtttcctgagatcgcaagaaggagatctgcacacatgttgaaacatcctgatgctcaaattataagccttggaattggtgacactaccgagcccattcctgaagtcataacttctgccatggcaaagagagcacatgaactgtcaacattaaatggttacagtggttatggtgctgagcaaggagaaaaagtaagtagtgccccctctcgtcatatttcagtaatatgatattagctctactatttattgtccaatccttgtttctcttccttcttttgctacaataataatggttctggccttcactgatagtttgtctttcctcgttttgtaccaatttgattgttcatttgtccttttctttcctcaaatacattgcaatattctttattcaggtatccactcaataaagttaaaaaacttcctcttctattcataacgtcattaaaggatgtgcagatgtg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0117B06-OI86t/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0117B06.1" temp_strand="-" temp_description="C06HBa0117B06.1  AC211048.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0117B06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="48681" stop="46453"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="48381" g_stop="48355" g_length="27"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="27" r_length="27" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="48354" i_stop="47982" i_length="373">
            <donor d_prob="0.795" d_score="0.00"/>
            <acceptor a_prob="0.669" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="47981" g_stop="47914" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="28" r_stop="95" r_length="68" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="47913" i_stop="47541" i_length="373">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.210" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="47540" g_stop="47424" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="96" r_stop="212" r_length="117" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="47423" i_stop="47091" i_length="333">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="47090" g_stop="46753" g_length="338"/>
          <reference_exon_boundary r_type="cDNA" r_start="213" r_stop="550" r_length="338" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0117B06.1" gen_strand="-" ref_id="SGN-U336130" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>550</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0117B06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U336130" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="48381" e_stop="48355"/>
          <exon e_start="47981" e_stop="47914"/>
          <exon e_start="47540" e_stop="47424"/>
          <exon e_start="47090" e_stop="46753"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGCAACACCCTCTACGGAGAAAACTTGTAAGCCTTTATTTTAGTGTTGGTTTCCAGTTATATATTGCCAAGTTGAAATGAGAATAGTAGACTTGCGAGCCTGTGCAATGTGGATCAGTTAGAGCCTTTGGCAATTAATGTTGAGAACTTTAAACTAATCAATGTATTGCATATAAATTATTTCAACTTGCTGAAAAAGCAAATTTAAGACTCAAAATGTTTGCTACATGCACGTTTTTGAAATGCAAGAATTGTAAAATTATTGTCTTTCAACAATAACAAAAAGAAAACAACTGTCAGTTTAGGTGAGGTCTTAGTCTCATCTGTATCAGTCCATTCAAATAGCTGTGCATTCTGTTAACATTTGACTGCGCTAACGAAATTTCTGTTTGTCTTGAAGCTTACAAGACACAGGTCTCCCGCAATGAAAACTTAGCGAAACTTCAAGCTGGTTATCTGTTTCCTGAGGTCTGTATTTCAACTGGTCAATTGTCATTAAGTTGATTGCTGTTTATCTGTATTTTTAAGGTACTTTGCTATAGAAGATGTAGCATTGCTTTTGGGAACATGCAAATAAAATATTGATTTAGATGAAATTGCAGTAATTTGGAATCACGATAAGCCAGTGAGCAAATTTAGTTACCTGAAGCAAAATTATTTGCTTTTTTAGCTGAATTTGGATGACTTATTATGTATCTTTACCTCTCTATGCTTCCATCCTGAAATAGGAGAAATAATTCAATTCTTTATAGTAATACACTCAAAGAGAACTCTTATTTTGTAAACCATCTCTCCTACCTGCATCGAGTTAAGTTCTAAACAATATCTTTGGTGAAGTTAGATCGCAAGAAGGAGATCTGCACACATGTTGAAACATCCTGATGCTCAAATTATAAGCCTTGGAATTGGTGACACTACCGAGCCCATTCCTGAAGTCATAACTTCTGCCATGGCAAAGGTAATACTGATATCTCTATCATACTATAGTTTTTTGTTATGGGTCAAAACTTCGAAGTTTACTGTATTTTTGTGTCCTATTCTGCCTGACCAATGATGGGATTACTAACAAAAATCATGTAGCTGGTAACACTTGGTTTTATACTAGACATCTGTCTAAATATTTCTGTTGATGAAAAATAAAATATTTCTGTTGATAGATTTCAGCATATGCTTACATAGACTACCATTTAACTTGATAGGTAGTGTGTATTTTTAATCTATTCTGCTTATTGAACTATAAGTCGATAACTTACTTCCTGTTCTTGATTTTGTTTTCTTTGCTCATTTGCAGAGAGCACATGAACTGTCAACATTAAATGGTTACAGTGGTTATGGTGCTGAGCAAGGAGAAAAAGTAAGTAGTGCCCCCTCTCGTCATATTTCAGTAATATGATATTAGCTCTACTATTTATTGTCCAATCCTTGTTTCTCTTCCTTCTTTTGCTACAATAATAATGGTTCTGGCCTTCACTGATAGTTTGTCTTTCCTCGTTTTGTACCAATTTGATTGTTCATTTGTCCTTTTCTTTCCTCAAATACATTGCAATATTCTTTATTCAGGTATCCACTCAATAAAGTTAAAAAACTTCCTCTTCTATTCATAACGTCATTAAGGGATGTGCAGATGTG</genome_strand>
        <mrna_strand>TTGCAACACCCTCTACGGAGAAAACTT.....................................................................................................................................................................................................................................................................................................................................................................................CTTACAAGACACAGGTCTCCCGCAATGAAAACTTAGCGAAACTTCAAGCTGGTTATCTGTTTCCTGAG.....................................................................................................................................................................................................................................................................................................................................................................................ATCGCAAGAAGGAGATCTGCACACATGTTGAAACATCCTGATGCTCAAATTATAAGCCTTGGAATTGGTGACACTACCGAGCCCATTCCTGAAGTCATAACTTCTGCCATGGCAAAG.............................................................................................................................................................................................................................................................................................................................................AGAGCACATGAACTGTCAACATTAAATGGTTACAGTGGTTATGGTGCTGAGCAAGGAGAAAAAGTAAGTAGTGCCCCCTCTCGTCATATTTCAGTAATATGATATTAGCTCTACTATTTATTGTCCAATCCTTGTTTCTCTTCCTTCTTTTGCTACAATAATAATGGTTCTGGCCTTCACTGATAGTTTGTCTTTCCTCGTTTTGTACCAATTTGATTGTTCATTTGTCCTTTTCTTTCCTCAAATACATTGCAATATTCTTTATTCAGGTATCCACTCAATAAAGTTAAAAAACTTCCTCTTCTATTCATAACGTCATTAAAGGATGTGCAGATGTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0117B06-OI86t/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U319073" ref_strand="+" ref_description="SGN-U319073        Tomato 200607 #1 [14 ESTs aligned] arabidopsis/peptide: | Symbol: None | expressed protein, contains 3 transmembrane domains; contains Pfam profile PF05832: Eukaryotic protein of unknown function | chr1:3012764-3015093 REVERSE | Aliases: T31J12.5, T31J12_5(evalue: 2e-82, score=302) genbank/nr: gi|18391009|ref|NP_563842.1| expressed protein [Arabidopsis thaliana] gi|38257656|sp|Q8LEK2|FA18_ARATH FAM18-like protein At1g09330 gi|21553515|gb|AAM62608.1| unknown [Arabidopsis thaliana] gi|28466859|gb|AAO44038.1| At1g09330 [Arabidopsis thaliana](evalue: 2e-80, score=302)">
      <seq>gagatcaggcgaaatcctaaggaaaattgatttgaaaaattcgacatggatcttaatccacctgcaggggaggactatgcacacccacagatatgttttttccatgtgctcttcaaggcagcagcattagcgttttatattctgtcagctttatttgttgatagttttgttatcatctttgtggtaactgttcttttagctgctcttgacttttgggtggttaagaacgtcagtggacgtattcttgtgggtttaaggtggtggaatgaaatagatgacaatggcgagagtgtgtggagatttgagtgccttgatcaagagtcaatggctcgcatgaacaagaaggattcctggctgttttggtggactttgtacctaacagctgttgcttggttctttctcgcgatattctccctcattaggttccaagctgattatcttctcgttgttggagtttgcttgactctcagcgtcgcaaatattgttggttttactagatgccgcaaagatgctaagaagcagcttcaagcatttgcaacccagaccctcacttctcggttctcctctactctacagtcggcatttagtgttgtttgaacaattaatacagaacaagctactcgtgagaggaaactggtcgtcagtgtccacctctacgaacaatcatgtattgattatataatggtggtttgtatacgctgtgaaattatgatggcacatatcggaaggatgcttaggagattttgacatggtgttaatttggacctctcctttattgaggtcttgtacatgcagaacatgaacgaactgggaaaacgtttttgttcctttcagttttcatgaatccaattgcttcattgtatttttattttttttgcaccgcacggctggtgaatcgacgtatgggccatatgcataaatgtatctgaaatttgccattcacgttcaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0117B06-OI86t/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0117B06.1" temp_strand="+" temp_description="C06HBa0117B06.1  AC211048.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0117B06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="50194" stop="54510"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="50494" g_stop="50553" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="60" r_length="60" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="50554" i_stop="52458" i_length="1905">
            <donor d_prob="0.930" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="52459" g_stop="52515" g_length="57"/>
          <reference_exon_boundary r_type="cDNA" r_start="61" r_stop="117" r_length="57" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="52516" i_stop="52598" i_length="83">
            <donor d_prob="0.964" d_score="1.00"/>
            <acceptor a_prob="0.980" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="52599" g_stop="52802" g_length="204"/>
          <reference_exon_boundary r_type="cDNA" r_start="118" r_stop="321" r_length="204" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="52803" i_stop="52945" i_length="143">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.748" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="52946" g_stop="53005" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="322" r_stop="381" r_length="60" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="53006" i_stop="53303" i_length="298">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="53304" g_stop="53430" g_length="127"/>
          <reference_exon_boundary r_type="cDNA" r_start="382" r_stop="508" r_length="127" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="53431" i_stop="53771" i_length="341">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="53772" g_stop="54220" g_length="449"/>
          <reference_exon_boundary r_type="cDNA" r_start="509" r_stop="957" r_length="449" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0117B06.1" gen_strand="+" ref_id="SGN-U319073" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>957</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0117B06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U319073" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="50494" e_stop="50553"/>
          <exon e_start="52459" e_stop="52515"/>
          <exon e_start="52599" e_stop="52802"/>
          <exon e_start="52946" e_stop="53005"/>
          <exon e_start="53304" e_stop="53430"/>
          <exon e_start="53772" e_stop="54220"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGATCAGGCGAAATCCTAAGGAAAATTGATTTGAAAAATTCGACATGGATCTTAATCCAGTAAGCGTCGTAGTTTTCCTTATTTGATTCATTTTTTCACCTAATGCTGTAAATTGATACTTTGAAATCTCACAATTGTTTTTTTTTTGTGTGGGAATGAGTTGCATTGATGTTAGGGTTTTGTTTGAGCTCGTAATTATTTTATTTGATCTGTTGATTTGCTCTTTTGTTTGGATTTTCGTGTTTCCATTACTTTTCTACTGCATATCATGTGTTACGGATCTGTCTTTGGGAATTGAAAATTTCTGCTTTAGTGAATTGTATTACCCGGTAGGTGAATAATTTGTTTTAGTTGGATGAATTGTTACTGCAAATCTAGGTGAAATAATGGAGTTAGTAGGAAGTGTTGATGTGCTAGGCTCAAGGATATTATGGTGTCATAGTCACAATTTGATGAGTTTAGTATGGGACGAGTAGTCGAGTACTCCCTCATGTTGATCCCCTTGTTTACCAAGCAAGATCGAAATGATTGGGCATAAAGTGTCTGTAGATGGTGTCTTAAGTTTTGTCATTGATTGCTTATTTAATATAGTTGTATCTCTTTTTGAGAGACGACATAGTATTCCTGCTTTGTTCTATTCTCAAATCAATGTGAGCATTGCACGGATTTCACATCCAGACAAAGGAGGGAAAGTGCGGTTGGTTTATGTCTAGCGTAAAAGAAATATCTTCTAAATGTTGAGATCCTAATTTGCTTCAAGGAACAAATTCTTTTACTTGGACTGGACCTAAGTATTGTAAAATGGATGTAGAGGACTTTTTAGCCAATCATTTTAGCTTGGGAATGGAGCTTGGTGATTGTTTTGTATTACATAGTTTCTTGTGTGTATATATTGATGCAACTCTGAAATTTAAACTTCTAAATGTGTTATTTAATTTAATTACCTATATTTATTTATTTTAAAATGTGCTATTAATTTTGGATGACAGGTAAGTCCCACTGTCCCTCTATATCATGTCAGTTTCATGATCGGTGTGGTTAAGTTTTAGGTTAGTTTAGTAAAAGGTACGAATAGCAGTCTAGCACACTTACCTTGGAGGATAGAATCACATGGATGAAAGTTGTTTCAAAAGACTTATAAATTCTCAAAATCTACCTGCACTTTAGAGAGAAAATGACGGAAGTAAAGATCCATATAGAAGATACTGGCTAGTTGGAATTATAATCTATGTTGCTCGTACTCTTCAAAATGTCGACAGGTGTGTGTCAGGTCCTCCAAAAGTAGTGGTTTTTTTGGAGTATTCGACACGGGTGGGGCAACATATTTGGAGAGTCTGGGCAACATAGATTAAAACTTATTTATATTGGCATGCTTACATTAGCTTAAACATTATAGTAGTTTTTCTTACCCCTTTTTTCCTTGTTTAGATATTCGTATGTTAGTAGAAAATCTAGAGAACTCTAGCGGTAGATAATCCCAAACTATTGAAGATTGGAATGAAACTGGTCAGAATGTGGCGAAATAGATCTATAGTGCCAATATCAACTAGCATGGGATTGAGTGATAGTTGTTTTGTTATTGTTGTAATCTTTAAGTTCGTTCCTTTTAGATCAATCATCTGGATAAAACGGTGATATATGATCTAGGATAAGCAATGCAGGTAAAATAGGATTTTTTATCGGATGTCCCCGAAGGTAATTTTCTTTTTTAAAAAATAAAAATGGTTAACCTTTTACATAATACTCTTTAGCTTAGAGGAGTTTGTGGCCTTCCAGTTATCTTACTTTTCTCTGTTACTTATTGTAGATGATCTTCCCTTCTTATTTTCTCTCTTTTACTACCCTTGCTGCTCCTTTCTCCTTGCACCCCTAAACGCTCTCCGCTGCAAGGAAAGGAGGGAGCACATAGAATTTGTTGACTGATTCTATCATAAAGTTAATTAAGCTGTCACATTCTTTCTCAGCCTGCAGGGGAGGACTATGCACACCCACAGATATGTTTTTTCCATGTGCTCTTCAAGGTCTAGCTTATTACATATGCTTTTTATTTTAATGTCTTAGGTTGTAATTGCTTTCATTTAATACATTTTCTTTGCATTGACAGGCAGCAGCATTAGCGTTTTATATTCTGTCAGCTTTATTTGTTGATAGTTTTGTTATCATCTTTGTGGTAACTGTTCTTTTAGCTGCTCTTGACTTTTGGGTGGTTAAGAACGTCAGTGGACGTATTCTTGTGGGTTTAAGGTGGTGGAATGAAATAGATGACAATGGCGAGAGTGTGTGGAGATTTGAGTGCCTTGATCAAGAGGTGAGAAATCTTGTTTCAGGTTCCTTAGCATACATCTTTACCTTCAGACATTCGTTTATTTTTGAAGTGCTTGCCCATTTAGTCATTTTAATAATTACCTTTGTTGCCTTGGACAAACCTTTTTCCTTCACTTCTCCTTTCAGTCAATGGCTCGCATGAACAAGAAGGATTCCTGGCTGTTTTGGTGGACTTTGTACCTAACAGTAAGTGAAGACTCTATCACACTGGCTGCTTATTCTAATGTTCAATATAACAAACTGAGCACATGTATTGTACAATCAGAAAACAAGAAAAATCGGCAACAGGCACAAAATATATGTGGATAAGAACAATGGCCCTTCACACCTTGGCTTCTCGATTTTTTTTTCAGTTTTTACTTTTTCAAGATTCAGGCTTCAAATATATTCTAGAACTTCTTTTCTTTCTATCTGTACCTTATTTTTGCAAAGTGAAATAGTTAGTTGTTGATGTGTTGCACCTGATCCGTGTACTTTGTTGTAGGCTGTTGCTTGGTTCTTTCTCGCGATATTCTCCCTCATTAGGTTCCAAGCTGATTATCTTCTCGTTGTTGGAGTTTGCTTGACTCTCAGCGTCGCAAATATTGTTGGTTTTACTAGATGCCGCAAAGGTGTGTACTTACTTTAACTTCTATGGATTCTGCCTCTAACAATATCTTTACCTCTGGAGTTTTACTTTGTTTGGGTGCTCCAGTTTTCATGCATGAGCATAATATGTATGATGATAGATGTTGTCAGGTTCCCTCATTAGTTTGTGTATTCTCTTATTCGCTTCTGTTATGTATATATGTATGTATGTTGTTGCTTCTGTCTTGCTCTGCTTGTTTCAGTTCTCATTTTTGTGTTTGGTAGTCATGATCAGATCTCTGTGTACTATTCTCTTTTGAATTCTGCTTTCCAGTACGCCCTTACTGTTTAATATTCATATATTTTTCTTCTTTCTAATATCCAGATGCTAAGAAGCAGCTTCAAGCATTTGCAACCCAGACCCTCACTTCTCGGTTCTCCTCTACTCTACAGTCGGCATTTAGTGTTGTTTGAACAATTAATACAGAACAAGCTACTCGTGAGAGGAAACTGGTCGTCAGTGTCCACCTCTACGAACAATCATGTATTGATTATATAATGGTGGTTTGTATACGCTGTGAAATTATGATGGCACATATCGGAAGGATGCTTAGGAGATTTTGACATGGTGTTAATTTGGACCTCTCCTTTATTGAGGTCTTGTACATGCAGAACATGAACGAACTGGGAAAACGTTTTTGTTCCTTTCAGTTTTCATGAATCCAATTGCTTCATTGTATTTTTATTTTTTTTGCACCGCACGGCTGGTGAATCGACGTATGGGCCATATGCATAAATGTATCTGAAATTTGCCATTCACGTTCTGCAGCAAGT</genome_strand>
        <mrna_strand>GAGATCAGGCGAAATCCTAAGGAAAATTGATTTGAAAAATTCGACATGGATCTTAATCCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTGCAGGGGAGGACTATGCACACCCACAGATATGTTTTTTCCATGTGCTCTTCAAG...................................................................................GCAGCAGCATTAGCGTTTTATATTCTGTCAGCTTTATTTGTTGATAGTTTTGTTATCATCTTTGTGGTAACTGTTCTTTTAGCTGCTCTTGACTTTTGGGTGGTTAAGAACGTCAGTGGACGTATTCTTGTGGGTTTAAGGTGGTGGAATGAAATAGATGACAATGGCGAGAGTGTGTGGAGATTTGAGTGCCTTGATCAAGAG...............................................................................................................................................TCAATGGCTCGCATGAACAAGAAGGATTCCTGGCTGTTTTGGTGGACTTTGTACCTAACA..........................................................................................................................................................................................................................................................................................................GCTGTTGCTTGGTTCTTTCTCGCGATATTCTCCCTCATTAGGTTCCAAGCTGATTATCTTCTCGTTGTTGGAGTTTGCTTGACTCTCAGCGTCGCAAATATTGTTGGTTTTACTAGATGCCGCAAAG.....................................................................................................................................................................................................................................................................................................................................................ATGCTAAGAAGCAGCTTCAAGCATTTGCAACCCAGACCCTCACTTCTCGGTTCTCCTCTACTCTACAGTCGGCATTTAGTGTTGTTTGAACAATTAATACAGAACAAGCTACTCGTGAGAGGAAACTGGTCGTCAGTGTCCACCTCTACGAACAATCATGTATTGATTATATAATGGTGGTTTGTATACGCTGTGAAATTATGATGGCACATATCGGAAGGATGCTTAGGAGATTTTGACATGGTGTTAATTTGGACCTCTCCTTTATTGAGGTCTTGTACATGCAGAACATGAACGAACTGGGAAAACGTTTTTGTTCCTTTCAGTTTTCATGAATCCAATTGCTTCATTGTATTTTTATTTTTTTTGCACCGCACGGCTGGTGAATCGACGTATGGGCCATATGCATAAATGTATCTGAAATTTGCCATTCACGTTCAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0117B06-OI86t/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U313631" ref_strand="+" ref_description="SGN-U313631        Tomato 200607 #1 [74 ESTs aligned] arabidopsis/peptide: | Symbol: None | expressed protein | chr1:3015388-3018236 FORWARD | Aliases: None(evalue: 0, score=649) genbank/nr: gi|15217485|ref|NP_172405.1| RNA-binding protein -related [Arabidopsis thaliana] gi|25402537|pir||E86226 hypothetical protein [imported] - Arabidopsis thaliana gi|4337177|gb|AAD18098.1| Identical to gb|Y10557 g5bf gene from Arabidopsis thaliana.  ESTs gb|R30578, gb|R90475, gb|T22384, gb|T22425, gb|N64934 and gb|T46767 come from this gene gi|11762234|gb|AAG40395.1| At1g09340 [Arabidopsis thaliana] gi|14334754|gb|AAK59555.1| putative RNA-binding protein [Arabidopsis thaliana] gi|16226247|gb|AAL16114.1| At1g09340/T31J12_6 [Arabidopsis thaliana] gi|17979099|gb|AAL47493.1| putative RNA-binding protein [Arabidopsis thaliana](evalue: 0, score=649)">
      <seq>atatggacatcaagaaaatcatcatagcccttcttcttcttctttattctctgccccaagttcttcttcacactgaggaaggaaaaaaaggcaccaaatcaacaacaacatggctagtttggttgctattcaacccaaacagccttctttctctctccttccttcttccaattctgacttcaatggtgccagattgatctcctcatttcagtataagaggaaaccatgcttgtcaaaaggagcattgcaagttacagcctcgagtgaaaagaaaatcctgataatgggaggcacgcgattcattggtgtgttcctatcgagacttcttgtgaaagaaggccaccaggttactctattcacaagaggaaaagctccaatctctcaacaattgccaggtgaatcggaccaggattatgctgatttctcctccaagttattgcacttgaagggtgacagaatggatttcgattttgtgaagagcagtctttctgcagagggctatgatgttgtgtatgacataaatggacgtgaagcaactgaagtggagccaatattggatgcattacctaatctagaacagtacatctactgctcttcagctggtgtataccttaaaactgattatttaccacattttgaggttgatgcaggtgacccgaagagtaggcataaaggaaagcttgagacagaaagcttgttagtatcacgagatgttaattggacttctctaaggcctgtttatatttatgggccacttaactacaatcctgttgaagagtggttcttccaccgattgaaggctggtcgcccaattccgattcctaactcagggatgcaaataactcaacttggacatgtgaaggatcttgcaaaggcttttgttcaggttcttggaaatgagaaagcaagcaagcaagtatttaacatatccggagagaaatatgtcacatttgatggattagctaaggcttgcgccaaggctggtggtttcccggaacccgagcttgttcattacaaccctaaggagttcgattttggcaagaagaaagcattcccattccgtgaccagcatttctttacatccatcgagaagtcaaaggctgagctaggatggaaacctgattttgatctggtggaaggtcttacagactcttacaacctagatttcggacgaggaacattcaggaaagcagctgatttctctacagatgatatgattcttgaaaagaaactagttccccagagctaatatttctgtttttcatttcattagttttggtttcttgctttttctccaagaagttcacaagtcattagtggcaaactatttgaaattttccttgtatattaacttcactaaaatgaaatgaatgacaactattgtcattttgccatcaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaattcccggggggggggcccggaccccctttccccctaaaggggggcaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0117B06-OI86t/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0117B06.1" temp_strand="+" temp_description="C06HBa0117B06.1  AC211048.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0117B06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="54964" stop="124728"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="55264" g_stop="55474" g_length="211"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="211" r_length="211" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="55475" i_stop="55991" i_length="517">
            <donor d_prob="0.981" d_score="1.00"/>
            <acceptor a_prob="0.961" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="55992" g_stop="56126" g_length="135"/>
          <reference_exon_boundary r_type="cDNA" r_start="212" r_stop="346" r_length="135" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="56127" i_stop="56276" i_length="150">
            <donor d_prob="0.878" d_score="1.00"/>
            <acceptor a_prob="0.988" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="56277" g_stop="56363" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="347" r_stop="433" r_length="87" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="56364" i_stop="56457" i_length="94">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.502" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="56458" g_stop="56548" g_length="91"/>
          <reference_exon_boundary r_type="cDNA" r_start="434" r_stop="524" r_length="91" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="56549" i_stop="56692" i_length="144">
            <donor d_prob="0.982" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="56693" g_stop="56747" g_length="55"/>
          <reference_exon_boundary r_type="cDNA" r_start="525" r_stop="579" r_length="55" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="56748" i_stop="56960" i_length="213">
            <donor d_prob="0.982" d_score="1.00"/>
            <acceptor a_prob="0.779" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="56961" g_stop="57021" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="580" r_stop="640" r_length="61" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="57022" i_stop="57454" i_length="433">
            <donor d_prob="0.864" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="57455" g_stop="57676" g_length="222"/>
          <reference_exon_boundary r_type="cDNA" r_start="641" r_stop="862" r_length="222" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="57677" i_stop="57986" i_length="310">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="57987" g_stop="58103" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="863" r_stop="979" r_length="117" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="58104" i_stop="58188" i_length="85">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="58189" g_stop="58278" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="980" r_stop="1069" r_length="90" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="58279" i_stop="58623" i_length="345">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.881" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="58624" g_stop="58947" g_length="324"/>
          <reference_exon_boundary r_type="cDNA" r_start="1070" r_stop="1393" r_length="324" r_score="1.000"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="58948" i_stop="59952" i_length="1005">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.58"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="59953" g_stop="59997" g_length="45"/>
          <reference_exon_boundary r_type="cDNA" r_start="1394" r_stop="1438" r_length="45" r_score="0.578"/>
        </exon>
        <intron i_serial="11">
          <gDNA_intron_boundary i_start="59998" i_stop="60329" i_length="332">
            <donor d_prob="0.000" d_score="0.58"/>
            <acceptor a_prob="0.481" a_score="0.49"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="12">
          <gDNA_exon_boundary g_start="60330" g_stop="60372" g_length="43"/>
          <reference_exon_boundary r_type="cDNA" r_start="1439" r_stop="1480" r_length="42" r_score="0.488"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0117B06.1" gen_strand="+" ref_id="SGN-U313631" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>1481</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0117B06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U313631" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="55264" e_stop="55474"/>
          <exon e_start="55992" e_stop="56126"/>
          <exon e_start="56277" e_stop="56363"/>
          <exon e_start="56458" e_stop="56548"/>
          <exon e_start="56693" e_stop="56747"/>
          <exon e_start="56961" e_stop="57021"/>
          <exon e_start="57455" e_stop="57676"/>
          <exon e_start="57987" e_stop="58103"/>
          <exon e_start="58189" e_stop="58278"/>
          <exon e_start="58624" e_stop="58947"/>
          <exon e_start="59953" e_stop="59997"/>
          <exon e_start="60330" e_stop="60372"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATATGGACATCAAGAAAATCATCATAGCCCTTCTTCTTCTTCTTTATTCTCTGCCCCAAGTTCTTCTTCACACTGAGGAAGGAAAAAAAGGCACCAAATCAACAACAACATGGCTAGTTTGGTTGCTATTCAACCCAAACAGCCTTCTTTCTCTCTCCTTCCTTCTTCCAATTCTGACTTCAATGGTGCCAGATTGATCTCCTCATTTCAGGTACCCACATATGTTGGGCTTTTTGTGGGTTTGGGTAGAATTTTTTTGTCACTCTGTTTGAATACTGGCTTGGGGTTTAGCTAGTATTTCGTAATTTGCATAAAAATCCTACCTTTATCTGTTATGGTTTCAAGAAGATTATAAAAATGTTTTCTTTACTACACATTAGGTTATACTATTGCGTGGTAATGTTTTTTTCAAATAACATGGTATCTGAACCAGTTTGTGCGATTAGTTACTTGGGTACGGGGTACCTACTACATTTCACCACTACATGTAGGATAACTCTGTCCAAAAAGTCTTGGACGGGGTGCTAACGTGATAGTGTTATCTTTGTCTTTTTAAGTTAATCTTTGGCTTATGCAAGACAGGAAGAGTGAGTATTAATTGTTTAGAATGCTGAGAATTGATGCTTTTCCATATTCCATATGTATCAAGAAGCTGCTACTTTTGCTTTGCTGCATAATGAGTTGATATGATGGGTTTTTCTGGTTTTAATTTTATATGATGGTTTTAGTATAAGAGGAAACCATGCTTGTCAAAAGGAGCATTGCAAGTTACAGCCTCGAGTGAAAAGAAAATCCTGATAATGGGAGGCACGCGATTCATTGGTGTGTTCCTATCGAGACTTCTTGTGAAAGAAGGCCACCAGGTAATCGACCCAGACTAAGCTCTCTCTAAAGTTCAAATCATTTTCTGACTTCTACGTTGTCATCCAAATTATTACCAGGCGAAGATTATAGTCTTTGATGTTTGAAGTTACCTTGGAAATTCACAATCTTTTAATGATGCACAAATGCAGGTTACTCTATTCACAAGAGGAAAAGCTCCAATCTCTCAACAATTGCCAGGTGAATCGGACCAGGATTATGCTGATTTCTCCTCCAAGGTATGTTGGAATTCAATGAGCTCTAAAGCTTTGGGATTTCATGATTAGAGTTACTCTAAGAGTCTAAGGAATGAGAGTTTTGTTCGAACTGCAGTTATTGCACTTGAAGGGTGACAGAATGGATTTCGATTTTGTGAAGAGCAGTCTTTCTGCAGAGGGCTATGATGTTGTGTATGACATAAATGGTACTCATTATTAGTGTTTTATTCTATATCTCAATGTATTCCGCGTTTTGTGTTGTTGCAAACATTTTTTTCTGGTAGAAGTATGTTTCTATTGTTTCCTCCTTTTTTGGTCTATTGTTCATGAACAATTCTTTTTTTATTCAGGACGTGAAGCAACTGAAGTGGAGCCAATATTGGATGCATTACCTAATCTAGAACAGTAAGCTGTGAATCCTCTTAATACATATCTGCTATGATTCTGTACCAGGAATCATTACTACTATACCAATTAGCTTGAACTATTTTACAATATTTGGTCATGAATTGGTCGCATTCATATGGCTTAGCCACTTTTTACTAGGTAAACATATTTGAATGACCGGATTGTGGTATTCCTTTTTATCTGATTATTTTAACTGCCTATGAATCTCAGGTACATCTACTGCTCTTCAGCTGGTGTATACCTTAAAACTGATTATTTACCACATTTTGAGGTCAGTTTAGTAGCATATGATTATTTTAAAAGCTTATATTCTGTCTACTTGTGATACTATGTAGTAAATAACAATAGACAACAACACATTCATGACCGTCATTTTGGTTAGTAGACACATACAAACAATATTTTTGCTCAAACAAGGTGTAGTTTTACACAGGAGGTTATTGTCAATATTTCAGTTCCAAGTTCTTAAAACTAAGGTTCGACTGGAGGCACTTGCAAAATTCTTATTATTGAACCTTGTCTCCTGGCAGAGAGATTAGACTTCATAATTATCTCAGAGGTGTAACAAGTAGCAGCTTATCTGCTCGGTCCTATTTGCACCTTGCTTCAGCCTTTCTTCTAAGTTTTGGTCTTATCTTGTCCCTTATTCTTTATGTAGTTGTTTTCCCCAAGGTTAACAAAAACATCTTTCCCAATGTCAACAGGTTGATGCAGGTGACCCGAAGAGTAGGCATAAAGGAAAGCTTGAGACAGAAAGCTTGTTAGTATCACGAGATGTTAATTGGACTTCTCTAAGGCCTGTTTATATTTATGGGCCACTTAACTACAATCCTGTTGAAGAGTGGTTCTTCCACCGATTGAAGGCTGGTCGCCCAATTCCGATTCCTAACTCAGGGATGCAAATAACTCAACTTGGACATGTGAAGGTTAGTCAGCACATATTAAAAGAGTAGTTCACATCTTTCTATTGTAAACTTCAAGCAATGCTATCGCCCTAGAAGTTCAACGGAGATGTCTTTGCTTAGGTCCTATACATATCCAATCTTTGCAAGTGGCTTCCATTTAGTAAAAACCAGGAAATATGTCTTTTCAAATAGGAGCAACGTACTCCTTAGTTCACTTTCAGGCAATACTTCAGTTCGACAGCATTATAACATAATGAGCTTAGGAATCGTCTAAAGAATCACAGCCTTGCATCTATGTGATAATATTTTTGCTTTCGGTTGATATTGGCAGGATCTTGCAAAGGCTTTTGTTCAGGTTCTTGGAAATGAGAAAGCAAGCAAGCAAGTATTTAACATATCCGGAGAGAAATATGTCACATTTGATGGATTAGCTAAGGCTTGCGCCAAGGTAATTTTTTTTGGTCAATGTTAGCTTATATTGCTTGTAAAAGCTTTGAATGATATACAATTGACTCTCAATATTCCTAATCCAGGCTGGTGGTTTCCCGGAACCCGAGCTTGTTCATTACAACCCTAAGGAGTTCGATTTTGGCAAGAAGAAAGCATTCCCATTCCGTGACCAGGTAAATATTAGTGTGTTGATTTCAGTTGTTTACCATTCATATTGAAATTCGAGACATTCTTTATCAAAGAATCAAATGATATGATCAAACTAAATGAATCATCAGTGAAGATTCACAACATGTTCACCGCCTCTTATCCTAGTCCCTTCCTAAAACACACATCAGTATGCTCACTAAAATTAACACACATTTTTGTACAATCAATCGTAGTCCAAACGAAATACTACAAGAAATATGGTTTATTTCCTCTGTTGAAGTTGTTAGCTTGTCTGTTTAATATCGGATTCTTGTCCAACACTAGTCTATCTATGTCTTCTCGTTGGTTTTAACATCGAATTTCTACAGCATTTCTTTACATCCATCGAGAAGTCAAAGGCTGAGCTAGGATGGAAACCTGATTTTGATCTGGTGGAAGGTCTTACAGACTCTTACAACCTAGATTTCGGACGAGGAACATTCAGGAAAGCAGCTGATTTCTCTACAGATGATATGATTCTTGAAAAGAAACTAGTTCCCCAGAGCTAATATTTCTGTTTTTCATTTCATTAGTTTTGGTTTCTTGCTTTTTCTCCAAGAAGTTCACAAGTCATTAGTGGCAAACTATTTGAAATTTTCCTTGTATATTAACTTCACTAAAATGAAATGAATGACAACTATTGTCATTTTGCCATCAACATTTTTTTGGGGTAGTGTGGCGGTCGTATAAATAACGGTTAAACTATGCGAAGTTGAATAAAAACGTTCTGTATCAATATTTTGGTAAATATAAAAAGTCCTTACCGTTAATAGTTTGATTCAAATACATTCCAATAGGTAAAACTTGCTCACATCGAATGTATACATCAAGTCAATACATGTGTCTAAAATTTATAGTTTATTTTACTTAATCATCATTAATTAACATGTGTTACTTCATTAAATTACGTAATAATAGAAGTTGCATTAATTTATTGTGAACAGCCGATGCGGATAAGTTTTTTTCCCGCTCCAATTGTTACTTTATTGAGTCAAAAATGTCTTTTTTCTTTTAAAAAAAGAGAACTTCTTTCCTACTATTTGATAATTTTTTTACTTTCAAACTTTTAGAATAATATGTTTTAGGCTGTAAGTTCTGCGCATCTTTAATTTATTAATATTCAAAATTCTTAAATTTTATTTCAAGTCAAACAAATCTTAACGATCAAAATACTATACCTATATATATTTGATTTGATTATAATAAATGCTAAAAATGTATGTAATGCTTTAAATAAAAGTTCAAAAGAGATTCATGCGTGACACAATTAATATTGTGGTCACACGAGTGTGAATATTAAAAGAGCGAGAGCGTAGCACGTACACTCAATATTTTTCGATATCTTTTAAAAAATAATTATTTTTATCGATTTAGTATAAACTAAAATGATTTTTTTTTTTAATCGATATAGTTGCTGGCCGCTTAGGTGTACCTAATTATGACGCGTTTTGGCCCTTCGCCCAATTTCATTCCCCAACGTAAATTATTTGACTTTGTATTTAGATCCGTTATTAACGTTCATTTTTATAAAGTTCGGAGTTGTAATATAATTGAAAGGATAAAAAGTAGTATTTCAAAAGTTTATATTAAATCAATGTTACTTATTATATTTTTATTTATCTAATGTAAACGTAGACTCACAAGATAGTATCACGTAGATCGAAAAGGAGTTGAAAATTATTAATAAAATAAGTTCAGGAGTAATAGACCCTTAGCATAATATAAATTTATCTCTAAGATTATGAATATAAGTTAAGGTGTACTTATGCATTATCCCAATATAAATCTGAATTAATAGTAATGAAAAAACATAAACTGCCCTCACAAGCTGGAGTGTCGGTTTGTTTAGCTTAGATTCATTTAAGTAGGGACCTCTTTGTTGGACTTCGTTTTTGAGATCCGTTAGCTATGTTCATTTTTTTAATCGAATTCGGATTTTCTATCTTTAATTAAAGATCTTAAATTAAGATTTTGAAATTAAAAAAGATTTTTTTTTGTTTAATAGATCTTATACATAGTAAAATTGAATTAGTAGGAGACCCAAACAAGTATATCACACGTTAAATGAAAAAAACAAA</genome_strand>
        <mrna_strand>ATATGGACATCAAGAAAATCATCATAGCCCTTCTTCTTCTTCTTTATTCTCTGCCCCAAGTTCTTCTTCACACTGAGGAAGGAAAAAAAGGCACCAAATCAACAACAACATGGCTAGTTTGGTTGCTATTCAACCCAAACAGCCTTCTTTCTCTCTCCTTCCTTCTTCCAATTCTGACTTCAATGGTGCCAGATTGATCTCCTCATTTCAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATAAGAGGAAACCATGCTTGTCAAAAGGAGCATTGCAAGTTACAGCCTCGAGTGAAAAGAAAATCCTGATAATGGGAGGCACGCGATTCATTGGTGTGTTCCTATCGAGACTTCTTGTGAAAGAAGGCCACCAG......................................................................................................................................................GTTACTCTATTCACAAGAGGAAAAGCTCCAATCTCTCAACAATTGCCAGGTGAATCGGACCAGGATTATGCTGATTTCTCCTCCAAG..............................................................................................TTATTGCACTTGAAGGGTGACAGAATGGATTTCGATTTTGTGAAGAGCAGTCTTTCTGCAGAGGGCTATGATGTTGTGTATGACATAAATG................................................................................................................................................GACGTGAAGCAACTGAAGTGGAGCCAATATTGGATGCATTACCTAATCTAGAACA.....................................................................................................................................................................................................................GTACATCTACTGCTCTTCAGCTGGTGTATACCTTAAAACTGATTATTTACCACATTTTGAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGATGCAGGTGACCCGAAGAGTAGGCATAAAGGAAAGCTTGAGACAGAAAGCTTGTTAGTATCACGAGATGTTAATTGGACTTCTCTAAGGCCTGTTTATATTTATGGGCCACTTAACTACAATCCTGTTGAAGAGTGGTTCTTCCACCGATTGAAGGCTGGTCGCCCAATTCCGATTCCTAACTCAGGGATGCAAATAACTCAACTTGGACATGTGAAG......................................................................................................................................................................................................................................................................................................................GATCTTGCAAAGGCTTTTGTTCAGGTTCTTGGAAATGAGAAAGCAAGCAAGCAAGTATTTAACATATCCGGAGAGAAATATGTCACATTTGATGGATTAGCTAAGGCTTGCGCCAAG.....................................................................................GCTGGTGGTTTCCCGGAACCCGAGCTTGTTCATTACAACCCTAAGGAGTTCGATTTTGGCAAGAAGAAAGCATTCCCATTCCGTGACCAG.........................................................................................................................................................................................................................................................................................................................................................CATTTCTTTACATCCATCGAGAAGTCAAAGGCTGAGCTAGGATGGAAACCTGATTTTGATCTGGTGGAAGGTCTTACAGACTCTTACAACCTAGATTTCGGACGAGGAACATTCAGGAAAGCAGCTGATTTCTCTACAGATGATATGATTCTTGAAAAGAAACTAGTTCCCCAGAGCTAATATTTCTGTTTTTCATTTCATTAGTTTTGGTTTCTTGCTTTTTCTCCAAGAAGTTCACAAGTCATTAGTGGCAAACTATTTGAAATTTTCCTTGTATATTAACTTCACTAAAATGAAATGAATGACAACTATTGTCATTTTGCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTCCCGGGGGG............................................................................................................................................................................................................................................................................................................................................GGGGCCCGGAC-CCCCTTTCCCCCTAAAGGGGGGCAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0117B06-OI86t/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U324622" ref_strand="-" ref_description="SGN-U324622        Tomato 200607 #1 [5 ESTs aligned] arabidopsis/peptide: AT3G07490.1 | Symbol: None | calcium-binding protein, putative, similar to calcium-binding protein GI:6580549 from (Lotus japonicus) | chr3:2391195-2391656 FORWARD | Aliases: F21O3.20 (evalue: 9e-58, score=220) genbank/nr: gi|28301674|emb|CAB63264.3| calcium-binding protein [Lotus corniculatus var. japonicus](evalue: 2e-58, score=229)">
      <seq>tgggaccgggcccccctcgagttttttttttttttttttacaattaaaaaaataaaataatagcagtaacaatttatttacatgtcacagcctatgacaataaaaaaataaaaataaaaattattctttccttgtctattttaataaataaaaatagtgagaaaaaaaagacgaaataattaaaataaaaataaaactaactcaatgcagcaaaaccacctcctctcatcatctgcttaaactcagcataattaaccattccatctccatcaatgtccactttgttaatcatttgtttacaatcctctactgttcgtccctgttttagccctaacgatgcgagaacagatttcaattcctcaacacaaatgaatccgtcgccgttttgatcgaacacattgaatgcctcacgcatatcttcttcttcatcgcgttcatccatgatggtctggtaaagcgaaccgaactcatctatgtcaacgcaaccgtctccattcacatcgattttctcgatcatctggattaattccggatctggtatgaatatccccatattctctaacgaactgtttaattcattcttcgttatccgtccgtcgccgttccgatcgaagatttggaagatacgtcggagttcgtctgagtccattctcttctgatgcgattcaacggcgtcggaaacggaaaccggcgactgttgtggcggcgccggtgaccgcgaatggatgtgtttttgttggaaccaagatggaggaaggaaggagatgagtttttttgggagtaaggagaggaggattgggttgaagagattgacaatgcaccgagttttgaagaaaatggctgggaattgcatttggtttttggattgtaaactattaaggggtggttgtagtttgttttgttgagaaaaaaataggagacaaattaggagtagcttttgggagaatatataaagtgcaagtttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0117B06-OI86t/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0117B06.1" temp_strand="-" temp_description="C06HBa0117B06.1  AC211048.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0117B06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="124735" stop="62536"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64259" g_stop="64225" g_length="35"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="35" r_length="35" r_score="0.429"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64224" i_stop="63766" i_length="459">
            <donor d_prob="0.900" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63765" g_stop="62836" g_length="930"/>
          <reference_exon_boundary r_type="cDNA" r_start="36" r_stop="965" r_length="930" r_score="0.978"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0117B06.1" gen_strand="-" ref_id="SGN-U324622" ref_strand="-">
        <total_alignment_score>0.978</total_alignment_score>
        <cumulative_length_of_scored_exons>965</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0117B06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U324622" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="64259" e_stop="64225"/>
          <exon e_start="63765" e_stop="62836"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAAAATGTATTGCTACTTAATTTCTTTTCTCAATTATATCTTTGTATAATATTTCAAAATACTATTTTACCTTTTACTTTAATTATTTAAATCTAGTCAAACCTCTTACCCTAGAATAATTAAGGATATTCCAATAAATTTATAAATTACAATAACGATACGATCAAACCAAACCATCAAAATATTACTAAACAAAAACAAACAATACAATCTAGTCAAACATTGCGTACAATACAATACAATACATTATGAAACAATGGGTAACAATGATCCAAACAAAGTGTTAAAGTTCTGATGCACCAATCATTTAAAATATTACTGAATATCTTTAGCTAATTTGAAAAATTCTTCAAAAAAAGTTCTGGAGATCTTTATGATTCAATTTTTTTTTTCAAATCAACGTATAATGAAAGCTTAATACACCTTGACAGATCCTTAGCTATTATAAGGTAACATTAATAAAATTTCGGAGGTAGAAAGATAATCCATACACAATTAACAATTGAAAAAATAAAATAATAGCAGTAACAATTTATTTACATGTCACCGCCTATGACATTAAAAAAATAAAAATAAAAGTTATTCTTTCCTTGTCTATTTTAAT-AATAAAAATAGTGAGTAAAAAAACAGACGAAATAATTAAAATAAAAATAAAACTAACTCAATGCAGCAAAACCACCTCCTCTCATCATCTGCTTAAACTCATCATAATTAACCATTCCATCTCCATCAATGTCCACTTTGTTAATCATTTGTTTACAATCCTCTACGGTTCGTCCCTGTTTTAGCCCTAACGATGCGAGAACAGATTTCAATTCCTCAACACAAATGAATCCGTCGCCGTTTTGATCGAACACATTGAATGCCTCACGCATATCTTCTTCTTCATCGCGTTCATCCATGATGGTCTGGTAAAGCGAACCGAACTCATCTATGTCAACGCAACCGTCTCCATTCACATCGATTTTCTCGATCATCTGGATTAATTCCGGATCTGGTATGAATATCCCCATATTCTCTAACGAACTGTTTAATTCATTCTTCGTTATCCGTCCGTCGCCGTTCCGATCGAAGATTTGGAAGATACGTCGGAGTTCGTCTGAGTCCATTCTCTTCTGATGCGATTCAACCGCGTCGGAAACGGAAACCGGCGACTGCTGTGGCGGCGCCGGTGACCGCGAATGGATGCGTTTTTGGTGGAACCAAGATGGAGGAAGGAAGGAGATGAGTTTTTTTGGGAGTAAGGAGAGGAGGATTGGGTTGAAGAGATTGAAAATGCAACGAGTTTTGAAGAAAATGGCTGGGAATTGCATTTGGTTTTTGGATTGTAAACTATTAAGGGGTGGTTGTAGTTTGTTTTGTTGAG-AAAAAATAGGAGACAAATTAGGAGTAGCTTTTGGGAGAATATATAAAGTGCAAGTTTG</genome_strand>
        <mrna_strand>TGGGACCGGGCCCCCCTCGAGTTTTTTTTTTTTTT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTACAATTAAAAAAATAAAATAATAGCAGTAACAATTTATTTACATGTCACAGCCTATGACAATAAAAAAATAAAAATAAAAATTATTCTTTCCTTGTCTATTTTAATAAATAAAAATAGTGAG-AAAAAAA-AGACGAAATAATTAAAATAAAAATAAAACTAACTCAATGCAGCAAAACCACCTCCTCTCATCATCTGCTTAAACTCAGCATAATTAACCATTCCATCTCCATCAATGTCCACTTTGTTAATCATTTGTTTACAATCCTCTACTGTTCGTCCCTGTTTTAGCCCTAACGATGCGAGAACAGATTTCAATTCCTCAACACAAATGAATCCGTCGCCGTTTTGATCGAACACATTGAATGCCTCACGCATATCTTCTTCTTCATCGCGTTCATCCATGATGGTCTGGTAAAGCGAACCGAACTCATCTATGTCAACGCAACCGTCTCCATTCACATCGATTTTCTCGATCATCTGGATTAATTCCGGATCTGGTATGAATATCCCCATATTCTCTAACGAACTGTTTAATTCATTCTTCGTTATCCGTCCGTCGCCGTTCCGATCGAAGATTTGGAAGATACGTCGGAGTTCGTCTGAGTCCATTCTCTTCTGATGCGATTCAACGGCGTCGGAAACGGAAACCGGCGACTGTTGTGGCGGCGCCGGTGACCGCGAATGGATGTGTTTTTGTTGGAACCAAGATGGAGGAAGGAAGGAGATGAGTTTTTTTGGGAGTAAGGAGAGGAGGATTGGGTTGAAGAGATTGACAATGCACCGAGTTTTGAAGAAAATGGCTGGGAATTGCATTTGGTTTTTGGATTGTAAACTATTAAGGGGTGGTTGTAGTTTGTTTTGTTGAGAAAAAAATAGGAGACAAATTAGGAGTAGCTTTTGGGAGAATATATAAAGTGCAAGTTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0117B06-OI86t/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U325731" ref_strand="+" ref_description="SGN-U325731        Tomato 200607 #1 [5 ESTs aligned]">
      <seq>ttgtttcggaaccaaacaactcctactagatcagtgaccttacggcgtcgtttgttcatcttctccgcaattattctattcttcattcggattcagtttctttggagaatttacttgggttttttgcttagtgttaattccctggtaattcctctctcttgccgatatagttcaattttttttatgtggtgttccgttgattgggcctcagtttgaattttttttaattttaacttacattagcattaacagctataatttgctgtgttaattaatcgtacattgtttgaatctcattaattatgtgtaatttagtgggtaagttgatgttaacggggaaaagattatattcccgtaatatttaaggtaataatctaacaattgatggtttatgagctgtttaatggctttgttaaatgtatttgatgctttgtagaatttaatctctcagtaataatataacaattgacttctgtgttttttttttctttattgacgttgcgatttgtataattttcgatctaggtgaaattctataggttttgtgttaaaatacaaacaatgtttgtctagttttggatatgaaatgctaagatggaattaggaaggggaagaggtttatttttggaattagtgaaggtatgattggattaatcagcatcggagtttagatggagtaacatggtcagtgatgattcatatagcgagacgtagttattta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0117B06-OI86t/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0117B06.1" temp_strand="+" temp_description="C06HBa0117B06.1  AC211048.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0117B06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="65575" stop="66895"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="65875" g_stop="66595" g_length="721"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="721" r_length="721" r_score="0.999"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0117B06.1" gen_strand="+" ref_id="SGN-U325731" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>721</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0117B06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U325731" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="65875" e_stop="66595"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGTTTCGGAACCAAACAACTCCTACTAGATCAGTGACCTTACGGCGTCGTTTGTTCATCTTCTCCGCAATTATTCTATTCTTCATTCGGATTCAGTTTCTTTGGAGAATTTACTTGGGTTTTTTGCTTAGTGTTAATTCCCTGGTAATTCCTCTCCCTTGCCGATATAGTTCAATTTTTTTTATGTGGTGTTCCGTTGATTGGGCCTCAGTTTGAATTTTTTTTAATTTTAACTTACATTAGCATTAACAGCTATAATTTGCTGTGTTAATTAATCGTACATTGTTTGAATCTCATTAATTATGTGTAATTTAGTGGGTAAGTTGATGTTAACGGGGAAAAGATTATATTCCCGTAATATTTAAGGTAATAATCTAACAATTGATGGTTTATGAGCTGTTTAATGGCTTTGTTAAATGTATTTGATGCTTTGTAGAATTTAATCTCTCAGTAATAATATAACAATTGACTTCTGTGTTTTTTTTTTCTTTATTGACGTTGCGATTTGTATAATTTTCGATCTAGGTGAAATTCTATAGGTTTTGTGTTAAAATACAAACAATGTTTGTCTAGTTTTGGATATGAAATGCTAAGATGGAATTAGGAAGGGGAAGAGGTTTATTTTTGGAATTAGTGAAGGTATGATTGGATTAATCAGCATCGGAGTTTAGATGGAGTAACATGGTCAGTGATGATTCATATAGCGAGACGTAGTTATTTA</genome_strand>
        <mrna_strand>TTGTTTCGGAACCAAACAACTCCTACTAGATCAGTGACCTTACGGCGTCGTTTGTTCATCTTCTCCGCAATTATTCTATTCTTCATTCGGATTCAGTTTCTTTGGAGAATTTACTTGGGTTTTTTGCTTAGTGTTAATTCCCTGGTAATTCCTCTCTCTTGCCGATATAGTTCAATTTTTTTTATGTGGTGTTCCGTTGATTGGGCCTCAGTTTGAATTTTTTTTAATTTTAACTTACATTAGCATTAACAGCTATAATTTGCTGTGTTAATTAATCGTACATTGTTTGAATCTCATTAATTATGTGTAATTTAGTGGGTAAGTTGATGTTAACGGGGAAAAGATTATATTCCCGTAATATTTAAGGTAATAATCTAACAATTGATGGTTTATGAGCTGTTTAATGGCTTTGTTAAATGTATTTGATGCTTTGTAGAATTTAATCTCTCAGTAATAATATAACAATTGACTTCTGTGTTTTTTTTTTCTTTATTGACGTTGCGATTTGTATAATTTTCGATCTAGGTGAAATTCTATAGGTTTTGTGTTAAAATACAAACAATGTTTGTCTAGTTTTGGATATGAAATGCTAAGATGGAATTAGGAAGGGGAAGAGGTTTATTTTTGGAATTAGTGAAGGTATGATTGGATTAATCAGCATCGGAGTTTAGATGGAGTAACATGGTCAGTGATGATTCATATAGCGAGACGTAGTTATTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0117B06-OI86t/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U323881" ref_strand="+" ref_description="SGN-U323881        Tomato 200607 #1 [6 ESTs aligned] arabidopsis/peptide: | Symbol: None | expressed protein | chr4:16380081-16381311 REVERSE | Aliases: None(evalue: 6e-76, score=281) genbank/nr: gi|21594009|gb|AAM65927.1| unknown [Arabidopsis thaliana](evalue: 2e-74, score=282)">
      <seq>gtggaaaacgtagcttcttctcccaaaaagtcttcattctactctgggcaaagcaacatggctggtcgtggtggagtagaaaagcatcactgggatggcgttgtaccaaacgagtgccatccagatgcttctagaattttccgtcttagtgcacacctccattatgaggtggcacgtgagccactccaccatgacattgatgcgaagaagacatgtggtgttggacctggaatgtcatttgcaaatgcaatcaaggaccgagtggaagctattgggttagtgccatgtgctgtaggaggaactgcgataaaggagtgggcacacgggcaacacttgtatgtgaatatgatcaacagagctagagctgccatgagtcatggaggagaaatcaaggcattgctttggtatcaaggagagagtgatacattatctcagcattgcgtcgatacatataaggctaatatggagaagttaatacatgatgttcgtgctgatttgcatctgccatctctgccaattattcaggttgcaattgcatcaggagatgagaagtatattgaaaagattcgagaagcacaaaaggcaattgatcttccaaatgttgtatgtgttgatgccatgggattgcagctaaaggaagataatcttcatttaactacagaggctcaagttaaattaggccaaatgttggctgatgcataccttacccattttgcaccacaagaaccttgtgttgctacatcttgagaaatttgatgtattatgtgtgtgtaaactaaaaattatttaatcctggctcatgaacataacgtgagtggctgagtgctcatataagtatgttattactttgaagtaagtttactcattttctgtatctcttcatttctttactttaaaatgagtatttccttgtctgcatttcttcatttagctttcaaatattttcaattgtacaattattgtgacatataatacttatatagttttcaaatatgcaaatttaatttaaaaaaactttaaagatagcaaattgggcaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0117B06-OI86t/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0117B06.1" temp_strand="+" temp_description="C06HBa0117B06.1  AC211048.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0117B06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="66634" stop="68408"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="66934" g_stop="67458" g_length="525"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="525" r_length="525" r_score="0.989"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="67459" i_stop="67592" i_length="134">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="67593" g_stop="68113" g_length="521"/>
          <reference_exon_boundary r_type="cDNA" r_start="526" r_stop="1046" r_length="521" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0117B06.1" gen_strand="+" ref_id="SGN-U323881" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>1046</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0117B06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U323881" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="66934" e_stop="67458"/>
          <exon e_start="67593" e_stop="68113"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGGAAAATGTAGCTTATTCTCCCAAAAATGTATTCATTCTA-TCTGGGCAAAGCAACATGGCTGGTCGTGGTGGAGTAGAAAAGCATCACTGGGATGGCGTTGTACCAAACGAGTGCCATCCAGATGCTTCTAGAATTTTCCGTCTTAGTGCACACCTCCATTATGAGGTGGCACGTGAGCCACTCCACCATGACATTGATGCGAAGAAGACATGTGGTGTTGGACCTGGAATGTCATTTGCAAATGCAATCAAGGACCGAGTGGAAGCTATTGGGTTAGTGCCATGTGCTGTAGGAGGAACTGCGATAAAGGAGTGGGCACACGGGCAACACTTGTATGTGAATATGATCAACAGAGCTAGAGCTGCCATGAGTCATGGAGGAGAAATCAAGGCATTGCTTTGGTATCAAGGAGAGAGTGATACATTATCTCAGCATTGCGTCGATACATATAAGGCTAATATGGAGAAGTTAATACATGATGTTCGTGCTGATTTGCATCTGCCATCTCTGCCAATTATTCAGGTTAGCTAACACAGTTTGCTTCAAGCCTGATGTGAAACTTTTCAAGGATTTTGGCAATTGTGGTTAGGTATTTCGTGGATCAAAGTAGTTGAACATTTTCACATGTTCTTTAACCATATTGCATTGTCGTATAGGTTGCAATTGCATCAGGAGATGAGAAGTATATTGAAAAGATTCGAGAAGCACAAAAGGCAATTGATCTTCCAAATGTTGTATGTGTTGATGCCATGGGATTGCAGCTAAAGGAAGATAATCTTCATTTAACTACAGAGGCTCAAGTTAAATTAGGCCAAATGTTGGCTGATGCATACCTTACCCATTTTGCACCACAAGAACCTTGTGTTGCTACATCTTGAGAAATTTGATGTATTATGTGTGTGTAAACTAAAAATTATTTAATCCTGGCTCATGAACATAACGTGAGTGGCTGAGTGCTCATATAAGTATGTTATTACTTTGAAGTAAGTTTACTCATTTTCTGTATCTCTTCATTTCTTTACTTTAAAATGAGTATTTCCTTGTCTGCATTTCTTCATTTAGCTTTCAAATATTTTCAATTGTACAATTATTGTGACATATAATACTTATATAGTTTTCAAATATGCAAATTTAATTTAAAAAAACTTTAAAGATAGCAAATTGGGCAACAACTTTG</genome_strand>
        <mrna_strand>GTGGAAAACGTAGCTTCTTCTCCCAAAAA-GTCTTCATTCTACTCTGGGCAAAGCAACATGGCTGGTCGTGGTGGAGTAGAAAAGCATCACTGGGATGGCGTTGTACCAAACGAGTGCCATCCAGATGCTTCTAGAATTTTCCGTCTTAGTGCACACCTCCATTATGAGGTGGCACGTGAGCCACTCCACCATGACATTGATGCGAAGAAGACATGTGGTGTTGGACCTGGAATGTCATTTGCAAATGCAATCAAGGACCGAGTGGAAGCTATTGGGTTAGTGCCATGTGCTGTAGGAGGAACTGCGATAAAGGAGTGGGCACACGGGCAACACTTGTATGTGAATATGATCAACAGAGCTAGAGCTGCCATGAGTCATGGAGGAGAAATCAAGGCATTGCTTTGGTATCAAGGAGAGAGTGATACATTATCTCAGCATTGCGTCGATACATATAAGGCTAATATGGAGAAGTTAATACATGATGTTCGTGCTGATTTGCATCTGCCATCTCTGCCAATTATTCAG......................................................................................................................................GTTGCAATTGCATCAGGAGATGAGAAGTATATTGAAAAGATTCGAGAAGCACAAAAGGCAATTGATCTTCCAAATGTTGTATGTGTTGATGCCATGGGATTGCAGCTAAAGGAAGATAATCTTCATTTAACTACAGAGGCTCAAGTTAAATTAGGCCAAATGTTGGCTGATGCATACCTTACCCATTTTGCACCACAAGAACCTTGTGTTGCTACATCTTGAGAAATTTGATGTATTATGTGTGTGTAAACTAAAAATTATTTAATCCTGGCTCATGAACATAACGTGAGTGGCTGAGTGCTCATATAAGTATGTTATTACTTTGAAGTAAGTTTACTCATTTTCTGTATCTCTTCATTTCTTTACTTTAAAATGAGTATTTCCTTGTCTGCATTTCTTCATTTAGCTTTCAAATATTTTCAATTGTACAATTATTGTGACATATAATACTTATATAGTTTTCAAATATGCAAATTTAATTTAAAAAAACTTTAAAGATAGCAAATTGGGCAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0117B06-OI86t/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U324163" ref_strand="+" ref_description="SGN-U324163        Tomato 200607 #1 [4 ESTs aligned] arabidopsis/peptide: | Symbol: None | nitrogen regulation family protein, similar to NITROGEN REGULATION PROTEIN NIFR3 (SP:Q08111) (Rhodobacter capsulatus); contains Pfam domain PF01207: Dihydrouridine synthase (Dus) | chr3:18411764-18415791 REVERSE | Aliases: T9C5.230(evalue: 2e-27, score=119) genbank/nr: gi|50926664|ref|XP_473279.1| OSJNBa0081C01.15 [Oryza sativa (japonica cultivar-group)] >gi|38346764|emb|CAD41143.2| OSJNBa0081C01.15 [Oryza sativa (japonica cultivar-group)] (evalue: 1e-29, score=133)">
      <seq>gaagagccgtcacaccagtttcgtatcctccaaaaatgtgttatatttgaaggagatctgacttggggtgaggtgatatttttagaggatctgggcaacatagcctccaattcagaagttataatctgagagatgctgttgcctcagaaatacaaaattaatctttgtaggcatgcttccttgtgacacatcaaataatgaacaatctgtatgagaaaagcattgttcatatatagttgatgatggtttttctatctgtttttatgaatatctacaggttgtttctgcttatgttttgcaacatgtaacaactttatcttataggtgcttcatctgtgatggttgcaagaggagccatgtggaatgcttctatattctcttctgagggaaaaacaccatgggaagatgtcaaaagagagtatgtgagaaagagtatattgtgggataatgatatcaaaagtacaaagcacaccctgaaggaaatgattacacactattcttcccttgggagcccagaggggctggcagtaattaaatcagatacctttgcagatctagcgaaactttatggagaagaggaatactatgaatatgtctcagaaagccggaggaagcagcagatgaaataagataagtagttcaccctcactaatcatacaagtcaatacaccaaggtgtcgattaaattggactaccgttataatttataaagcaagagatagaggtggactttgcacatgaggttgttaatgagttctgacttccttcccgtgacgcgactatacccaactgctatcccttgtttgagtttgaagtaacattccacaaccgctgaacgaatccatcagtttgaacaatattcattgtaagctgtacactaaattgaacttagtgggtttacctaacctgcataaaccaacacgatagctatgtatccgttggatcataaaggggtacaattgaagattttgctttattcatgctgcagacatcatttgcaaatttaatatatttatgtttagtgatatgactgaaatcatgtacaactaaaccaatgtggaggtagtataaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0117B06-OI86t/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0117B06.1" temp_strand="-" temp_description="C06HBa0117B06.1  AC211048.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0117B06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="71034" stop="68006"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="70734" g_stop="70304" g_length="431"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="431" r_length="431" r_score="0.993"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="70303" i_stop="70102" i_length="202">
            <donor d_prob="0.825" d_score="1.00"/>
            <acceptor a_prob="0.942" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="70101" g_stop="69974" g_length="128"/>
          <reference_exon_boundary r_type="cDNA" r_start="432" r_stop="559" r_length="128" r_score="0.992"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="69973" i_stop="68819" i_length="1155">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="68818" g_stop="68306" g_length="513"/>
          <reference_exon_boundary r_type="cDNA" r_start="560" r_stop="1072" r_length="513" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0117B06.1" gen_strand="-" ref_id="SGN-U324163" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>1072</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0117B06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U324163" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="70734" e_stop="70304"/>
          <exon e_start="70101" e_stop="69974"/>
          <exon e_start="68818" e_stop="68306"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAGAGCCGTCACACCAGTTTCGGATCCTCCAAAAATGTGTTATATTTGAAGGAGATCTGACTTGGGGTGAGGTGATATTTTTAAAGGATCTGGGCAACATAGCCTCCAATTCAGAAGTTATAATCTGAGAGATGCTGTTGCCTCAGAAATACAAAATTAATCTTTGTAGGCATGCTTCCTTGTGACACATCAAATAATGAACAATCTGTATGAGAAAAGCATTTTTCATATATAGTTGATGATGGTTTTTCTATCTGTTTTTATGAATATCTACAGGTTGTTTCTGCTTATGTTTTGCAACATGTAACAACTTTATCTTATAGGTGCTTCATCTGTGATGGTTGCAAGAGGAGCCATGTGGAATGCTTCTATATTCTCTTCTGAGGGAAAAACACCATGGGAAGATGTCAAAAGAGAGTATGTGAGAAAGGTATTCGGCCTGTGAACTAGATGTGAATCAATCTCTTATTACATGTTAAATTAACTCTAAATTAAGTAGCCACTTTGTCCATCCAGCATATAAATGAAATAGACTAAAATATATCCAGCATTTGTTTGAAATTGAAGTCATTGACTTCCTATATGCTTTTCACTGCAAATGTAAGTGACAGGTCTGGGTGCTTTGATTTCAGAGTATATTGTGGGATAATGATATCAAAAGTACAAAGCACACCCTGAAGGAAATGATTACACACTATTCTTCCCTTGGGAGCCCAGAGGGGCTGGCAGTAATTAAATCAGATACCTTTGCAGATGTAGCGTAAGTTTTTCTATCTGCTGCCGTTTACTTCCACCTGTGGTTACATGTGTTGGGATCAAATTTAGTTGCTGTTCAGTTAGTTTCCAAATTAAGTTGTTCATGTTCTGATAATGTATGACATCTGCTTCACCTCATCCCCTTGCTTCTTTTTTTACATAATTGCGTAGTCTGCTCATTCTAAAAGCTACTCAAAAGTTTGACTCAGTAAAAAGGAGGATTTATATTGTGAAAAGGTGCATGAGGTTCTTAATCTTCTCTTTCATCCTTGTACCATTATTCACTTTGAGATTTGTCCAGCATTGGCAGAGTCCATAAGTCCACAACCTTTACTATTATCATTGTTACAACTCTTCACAAATAAGCTGTCGATGGATATAACTAGCCAAGTAACTATGATTGGACTAATTACGTGTGAAATATGCTATATTTGAGAGGAGGTAACGAGAACAGGGAGAGAAGAACATTATTTCTCTCATTTGGCAAAAAAAGTTACTTATTGGAAGGAGTAACACCTTTTCCAACTCCTCTGTAAGTGGTCGAAGATGAGTTTGAGAGGGCATTTGGAAGATTTTATTCCCAAAGGTTTCTTCCTTGGACAGACAGCTACCTGTGAAGCAGTACTTATCCAAGATGATCTTCCCAATAAGAAGAGCATGAAGATTGTGGTTCTAATAGATAGTTCATGTGTGAATGGTATGAAAATTTTGCTAATCATCTTTCTTTGCTAAATGGGGTGGTGGAACATGTTCCTTTTCGTTTGGGATAGTGTATTACTGATGTCAGTGATGTGAGCATTTATTTGTATGGAGGGGTTATACTGTATGTACCACTGGTTAAGAATTTTGCACACTTCTCGCATGCATCATGTGGCTGCTTCAAAAGAGTGAAATGGGGAATATATGTGCGAAGTCTATATTTAAAAAATTGCGTACCCAGAGAATTTTGATAGTAATAAGTAGGGAGTTGGTTGTATTATCTGTCTTGCATGTTCATTTGCTTCCAAGGCGCCACTGACATAAAGTCACGTCAACAGCCTAAGATTTTATCACTTCTTATATATGAAGTCATCGTCAAACATATTTTCTCCTTCCTCTGGGTGTTTCTTCTGTAGGGCACCTACTAATTTAACTGACTGCATACTTACTGACTTTTCAGGAAACTTTATGGAGAAGAGGAATACTATGAATATGTCTCAGAAAGCCGGAGGAAGCAGCAGATGAAATAAGATAAGTAGTTCACCCTCACTAATCATACAAGTCAATACACCAAGGTGTCGATTAAATTGGACTACCGTTATAATTTATAAAGCAAGAGATAGAGGTGGACTTTGCACATGAGGTTGTTAATGAGTTCTGACTTCCTTCCCGTGACGCGACTATACCCAACTGCTATCCCTTGTTTGAGTTTGAAGTAACATTCCACAACCGCTGAACGAATCCATCAGTTTGAACAATATTCATTGTAGGCTGTACACTAAATTGAACTTAGTGGGTTTACCTAACCTGCATAAACCAACACGATAGCTATGTATCCGTTGGATCATAAGGGGGTACAATTGAAGTTTTTGCTTTATTCATGCTGCAGACATCATTTGCAAATTTAATATATTTATGTTTAGTGATATGACTGAAATCATGTACAACTAAACAAATTTGAAGTTAGTATAAA</genome_strand>
        <mrna_strand>GAAGAGCCGTCACACCAGTTTCGTATCCTCCAAAAATGTGTTATATTTGAAGGAGATCTGACTTGGGGTGAGGTGATATTTTTAGAGGATCTGGGCAACATAGCCTCCAATTCAGAAGTTATAATCTGAGAGATGCTGTTGCCTCAGAAATACAAAATTAATCTTTGTAGGCATGCTTCCTTGTGACACATCAAATAATGAACAATCTGTATGAGAAAAGCATTGTTCATATATAGTTGATGATGGTTTTTCTATCTGTTTTTATGAATATCTACAGGTTGTTTCTGCTTATGTTTTGCAACATGTAACAACTTTATCTTATAGGTGCTTCATCTGTGATGGTTGCAAGAGGAGCCATGTGGAATGCTTCTATATTCTCTTCTGAGGGAAAAACACCATGGGAAGATGTCAAAAGAGAGTATGTGAGAAAG..........................................................................................................................................................................................................AGTATATTGTGGGATAATGATATCAAAAGTACAAAGCACACCCTGAAGGAAATGATTACACACTATTCTTCCCTTGGGAGCCCAGAGGGGCTGGCAGTAATTAAATCAGATACCTTTGCAGATCTAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAACTTTATGGAGAAGAGGAATACTATGAATATGTCTCAGAAAGCCGGAGGAAGCAGCAGATGAAATAAGATAAGTAGTTCACCCTCACTAATCATACAAGTCAATACACCAAGGTGTCGATTAAATTGGACTACCGTTATAATTTATAAAGCAAGAGATAGAGGTGGACTTTGCACATGAGGTTGTTAATGAGTTCTGACTTCCTTCCCGTGACGCGACTATACCCAACTGCTATCCCTTGTTTGAGTTTGAAGTAACATTCCACAACCGCTGAACGAATCCATCAGTTTGAACAATATTCATTGTAAGCTGTACACTAAATTGAACTTAGTGGGTTTACCTAACCTGCATAAACCAACACGATAGCTATGTATCCGTTGGATCATAAAGGGGTACAATTGAAGATTTTGCTTTATTCATGCTGCAGACATCATTTGCAAATTTAATATATTTATGTTTAGTGATATGACTGAAATCATGTACAACTAAACCAATGTGGAGGTAGTATAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0117B06-OI86t/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U341362" ref_strand="+" ref_description="SGN-U341362        Tomato 200607 #1 [1 ESTs aligned]">
      <seq>aactcttcacaaataagctgtcgatggatataactagccaagtaactatgattggactaattacgtgtgaaatatgctatatttgagaggaggtaacgagaacagggagagaagaacattatttctctcatttggcaaaaaaagttacttattggaaggagtaacaccttttccaactcctctgtaagtggtcgaagatgagtttgagagggcatttggaagattttattcccaaaggtttcttccttggacagacagctacctgtgaagcagtacttatccaagatgatcttcccaataagaagagcatgaagattgtggttctaatagatagttcatgtgtgaatggtatgaaaattttgctaatcatctttctttgctaaatggggtggtggaacatgttccttttcgtttgggatagtgtattactgatgtcagtgatgtgagcatttatttgtatggaggggttatactgtatgtaccactggttaagaattttgcacacttctcgcatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0117B06-OI86t/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0117B06.1" temp_strand="-" temp_description="C06HBa0117B06.1  AC211048.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0117B06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="69928" stop="68814"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="69628" g_stop="69114" g_length="515"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="515" r_length="515" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0117B06.1" gen_strand="-" ref_id="SGN-U341362" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>515</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0117B06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U341362" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="69628" e_stop="69114"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACTCTTCACAAATAAGCTGTCGATGGATATAACTAGCCAAGTAACTATGATTGGACTAATTACGTGTGAAATATGCTATATTTGAGAGGAGGTAACGAGAACAGGGAGAGAAGAACATTATTTCTCTCATTTGGCAAAAAAAGTTACTTATTGGAAGGAGTAACACCTTTTCCAACTCCTCTGTAAGTGGTCGAAGATGAGTTTGAGAGGGCATTTGGAAGATTTTATTCCCAAAGGTTTCTTCCTTGGACAGACAGCTACCTGTGAAGCAGTACTTATCCAAGATGATCTTCCCAATAAGAAGAGCATGAAGATTGTGGTTCTAATAGATAGTTCATGTGTGAATGGTATGAAAATTTTGCTAATCATCTTTCTTTGCTAAATGGGGTGGTGGAACATGTTCCTTTTCGTTTGGGATAGTGTATTACTGATGTCAGTGATGTGAGCATTTATTTGTATGGAGGGGTTATACTGTATGTACCACTGGTTAAGAATTTTGCACACTTCTCGCATG</genome_strand>
        <mrna_strand>AACTCTTCACAAATAAGCTGTCGATGGATATAACTAGCCAAGTAACTATGATTGGACTAATTACGTGTGAAATATGCTATATTTGAGAGGAGGTAACGAGAACAGGGAGAGAAGAACATTATTTCTCTCATTTGGCAAAAAAAGTTACTTATTGGAAGGAGTAACACCTTTTCCAACTCCTCTGTAAGTGGTCGAAGATGAGTTTGAGAGGGCATTTGGAAGATTTTATTCCCAAAGGTTTCTTCCTTGGACAGACAGCTACCTGTGAAGCAGTACTTATCCAAGATGATCTTCCCAATAAGAAGAGCATGAAGATTGTGGTTCTAATAGATAGTTCATGTGTGAATGGTATGAAAATTTTGCTAATCATCTTTCTTTGCTAAATGGGGTGGTGGAACATGTTCCTTTTCGTTTGGGATAGTGTATTACTGATGTCAGTGATGTGAGCATTTATTTGTATGGAGGGGTTATACTGTATGTACCACTGGTTAAGAATTTTGCACACTTCTCGCATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0117B06-OI86t/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U337972" ref_strand="+" ref_description="SGN-U337972        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: | Symbol: None | nitrogen regulation family protein, similar to NITROGEN REGULATION PROTEIN NIFR3 (SP:Q08111) (Rhodobacter capsulatus); contains Pfam domain PF01207: Dihydrouridine synthase (Dus) | chr3:18411764-18415791 REVERSE | Aliases: T9C5.230(evalue: 1e-23, score=107) genbank/nr: gi|50926664|ref|XP_473279.1| OSJNBa0081C01.15 [Oryza sativa (japonica cultivar-group)] >gi|38346764|emb|CAD41143.2| OSJNBa0081C01.15 [Oryza sativa (japonica cultivar-group)] (evalue: 2e-24, score=116)">
      <seq>gagccatgtggaatgcttctattttctcttctgagggaaaaacaccatgggaagatgtcaaaagagagtatgtgagaaagagtatattgtgggataatgatatcaaaagtacaaagcacaccctgaaggaaatgataacacactattcttcccttgggcgcccggaggggctggcagtaattaaatcaaataccttggcagatctggcgtaagtttttatatcttctgccgttacttccacccgtggttacatgtgttgggatcaaatttagttgctgttcagttagtttccaaattaagttgttcatgttctgataatgtatgacatctgcttcacctcatccccttgcttgtttttttttacataattgcgtagtctgctcattctaaaagctactcaaaagtttgactcagtaaaaacgaggatttatattgtgaaaaggtgcatgaggttcttaatcttctctttcatccttgtattattcactttgagatttgtccaacattggcagagtccataagtccacaacctttactattatcattgttacaactcttcacatataagctgtcgatggatataactagccaattaactatgattggactaattagttgtcg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0117B06-OI86t/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0117B06.1" temp_strand="-" temp_description="C06HBa0117B06.1  AC211048.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0117B06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="70683" stop="69257"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="70383" g_stop="70304" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="80" r_length="80" r_score="0.988"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="70303" i_stop="70102" i_length="202">
            <donor d_prob="0.825" d_score="1.00"/>
            <acceptor a_prob="0.942" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="70101" g_stop="69559" g_length="543"/>
          <reference_exon_boundary r_type="cDNA" r_start="81" r_stop="621" r_length="541" r_score="0.950"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0117B06.1" gen_strand="-" ref_id="SGN-U337972" ref_strand="+">
        <total_alignment_score>0.955</total_alignment_score>
        <cumulative_length_of_scored_exons>623</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0117B06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U337972" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="70383" e_stop="70304"/>
          <exon e_start="70101" e_stop="69559"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGCCATGTGGAATGCTTCTATATTCTCTTCTGAGGGAAAAACACCATGGGAAGATGTCAAAAGAGAGTATGTGAGAAAGGTATTCGGCCTGTGAACTAGATGTGAATCAATCTCTTATTACATGTTAAATTAACTCTAAATTAAGTAGCCACTTTGTCCATCCAGCATATAAATGAAATAGACTAAAATATATCCAGCATTTGTTTGAAATTGAAGTCATTGACTTCCTATATGCTTTTCACTGCAAATGTAAGTGACAGGTCTGGGTGCTTTGATTTCAGAGTATATTGTGGGATAATGATATCAAAAGTACAAAGCACACCCTGAAGGAAATGATTACACACTATTCTTCCCTTGGGAGCCCAGAGGGGCTGGCAGTAATTAAATCAGATACCTTTGCAGATGTAGCGTAAGTTTTTCTATCTGCTGCCGTTTACTTCCACCTGTGGTTACATGTGTTGGGATCAAATTTAGTTGCTGTTCAGTTAGTTTCCAAATTAAGTTGTTCATGTTCTGATAATGTATGACATCTGCTTCACCTCATCCCCTTGC-T-TCTTTTTTTACATAATTGCGTAGTCTGCTCATTCTAAAAGCTACTCAAAAGTTTGACTCAGTAAAAAGGAGGATTTATATTGTGAAAAGGTGCATGAGGTTCTTAATCTTCTCTTTCATCCTTGTACCATTATTCACTTTGAGATTTGTCCAGCATTGGCAGAGTCCATAAGTCCACAACCTTTACTATTATCATTGTTACAACTCTTCACAAATAAGCTGTCGATGGATATAACTAGCCAAGTAACTATGATTGGACTAATTACGTGTGA</genome_strand>
        <mrna_strand>GAGCCATGTGGAATGCTTCTATTTTCTCTTCTGAGGGAAAAACACCATGGGAAGATGTCAAAAGAGAGTATGTGAGAAAG..........................................................................................................................................................................................................AGTATATTGTGGGATAATGATATCAAAAGTACAAAGCACACCCTGAAGGAAATGATAACACACTATTCTTCCCTTGGGCGCCCGGAGGGGCTGGCAGTAATTAAATCAAATACCTTGGCAGATCTGGCGTAAGTTTTTATATCTTCTGCCG-TTACTTCCACCCGTGGTTACATGTGTTGGGATCAAATTTAGTTGCTGTTCAGTTAGTTTCCAAATTAAGTTGTTCATGTTCTGATAATGTATGACATCTGCTTCACCTCATCCCCTTGCTTGTTTTTTTTTACATAATTGCGTAGTCTGCTCATTCTAAAAGCTACTCAAAAGTTTGACTCAGTAAAAACGAGGATTTATATTGTGAAAAGGTGCATGAGGTTCTTAATCTTCTCTTTCATCCTTGT---ATTATTCACTTTGAGATTTGTCCAACATTGGCAGAGTCCATAAGTCCACAACCTTTACTATTATCATTGTTACAACTCTTCACATATAAGCTGTCGATGGATATAACTAGCCAATTAACTATGATTGGACTAATTAGTTGTCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0117B06-OI86t/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U326229" ref_strand="+" ref_description="SGN-U326229        Tomato 200607 #1 [3 ESTs aligned] arabidopsis/peptide: | Symbol: None | nitrogen regulation family protein, similar to NITROGEN REGULATION PROTEIN NIFR3 (SP:Q08111) (Rhodobacter capsulatus); contains Pfam domain PF01207: Dihydrouridine synthase (Dus) | chr3:18411764-18415791 REVERSE | Aliases: T9C5.230(evalue: 4e-52, score=201) genbank/nr: gi|15229183|ref|NP_190533.1| nitrogen regulation protein family (NIFR3) [Arabidopsis thaliana] gi|11358454|pir||T46241 hypothetical protein T9C5.230 - Arabidopsis thaliana gi|6561964|emb|CAB62468.1| putative protein [Arabidopsis thaliana](evalue: 2e-50, score=201)">
      <seq>cggacccttccgcggcgccgctcgtcaattgcaaccactccgatactccgccgtggttggtcgccgccggctgggaaaattcttcctctcttttcaagtcaaggcatcgcactaacttatctgcctcgtcagaatgatggattacagaaacaagctagtcttggctccaatggtccgagtgggtacattgccgtttaggctgcttgctgcccaatatggagctgacataacctatggagaggagattattgatcataagatcatcaaatgtgagcggcgagttaatggtgtaaggatgtagcagcagttgacgtaaacatgggatgccccaagtcattctctattagtggaggcatgggtgctgcactgttgagcaaaccagagctcatccatgatattttgacaacattgcgaaggaacttggatgtaccaataacatgcaaaattaggttattaaaagatccgcaagatacagtggaattggcacgacgaattgagatgactggtgtctctgctcttgctgtccatggaaagaaagttccagataggccaagagatcctgcaaagtggaatgagattgctgatgttgctgccgctctctctattccagttatagcaaatggtgatgtttttgaata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0117B06-OI86t/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0117B06.1" temp_strand="-" temp_description="C06HBa0117B06.1  AC211048.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0117B06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="76849" stop="70848"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76549" g_stop="76447" g_length="103"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="103" r_length="103" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="76446" i_stop="75601" i_length="846">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="75600" g_stop="75523" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="104" r_stop="181" r_length="78" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="75522" i_stop="75336" i_length="187">
            <donor d_prob="0.953" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="75335" g_stop="75230" g_length="106"/>
          <reference_exon_boundary r_type="cDNA" r_start="182" r_stop="287" r_length="106" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="75229" i_stop="72352" i_length="2878">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="72351" g_stop="72243" g_length="109"/>
          <reference_exon_boundary r_type="cDNA" r_start="288" r_stop="396" r_length="109" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="72242" i_stop="72141" i_length="102">
            <donor d_prob="0.968" d_score="1.00"/>
            <acceptor a_prob="0.186" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="72140" g_stop="72004" g_length="137"/>
          <reference_exon_boundary r_type="cDNA" r_start="397" r_stop="533" r_length="137" r_score="0.993"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="72003" i_stop="71253" i_length="751">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="71252" g_stop="71148" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="534" r_stop="638" r_length="105" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0117B06.1" gen_strand="-" ref_id="SGN-U326229" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>638</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0117B06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U326229" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76549" e_stop="76447"/>
          <exon e_start="75600" e_stop="75523"/>
          <exon e_start="75335" e_stop="75230"/>
          <exon e_start="72351" e_stop="72243"/>
          <exon e_start="72140" e_stop="72004"/>
          <exon e_start="71252" e_stop="71148"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGGACCCTTCCGCGGCGCCGCTCGTCAATTGCAACCACTCCGATACTCCGCCGTGGTTGGTCGCCGCCGGCTGGGAAAATTCTTCCTCTCTTTTCAAGTCAAGGTCAGTAACAACTGTTGACCTGCTCTTTCTCTTTACTGGTCAATGTTTATATTTAGAGACGAGAGACTCATCAGTATTATTTTTTTAAACTTTACTGAGCAAATACTGTAAGATCCGAAGCTATATATGTAAATTGTATCGTTGAAGTCTAATTGTCCCTCGGAATTTGCAATTGCTGAAACGTAGGTTGGCTTTGAGTGAGAGCATCAGGATTTTATTTGACAGCTGATGTTTTGATTGAATAAATTTCTGTTCTTAATTGTCCATATAACGTAAGATCCAAATCTGTATATACATTGTGTTTCTTAAATGCTAGCCATGGTCAGGAATTATGTACAATTTGTTACTTGCTCAGTCTATTTTTACTTGTCCATGAAACAAAGTCAATAATTTGGAAAATAAGTATAGATAATAATAAGGGTAAAATTATTTGGGATGACCTAGTGATTTGAGCTTGGGACTTCCACGTTGGATATCTCAAGTTTGTAACCCCTTGCCAATAAAAATAAGAGGTTTGCCTTTTGGGTTGAGCTCATTACCCGGGGCTTGCCTAATGCGGATTACCTATCGTGTGTAGTTTGGGAGCTGTGGTGTGCACCCAAAGGTAGCGGCTACAGTTTCCCTTGTCATATAAGAAAGAAAAAAAAAGTAATAAGGGTAAAATGGTAAATTATCTTTTAATTTTCTTAACTGGACTAGTAAAATTGGACATCTTTTTTAAGTGTAGTGGACAATAAAAATGGATGGAGAGAATAATTTATAAGCATAACAGCTATTCGTAACCTGTAACTCTTTGTACAGTATACTGACTATACTCAATTTGGTCAATGTATACTATTGTCTCAGGCATCGCACTAACTTATCTGCCTCGTCAGAATGATGGATTACAGAAACAAGCTAGTCTTGGCTCCAATGGTCCGAGTGGTAAGTACCTTCAAGTGAATTTAAATTAGAGCAGTCCTGTTTTGGTACTTCATGTTCCCATTTCTAGATGTGTGTGGCTCTTTTTAAATTCACCAGGAAGCATAGTTAAAACTGCTCTTAATGTGTTTTTTACTTTACTAAATGATGCTTTAAATGCCCATGTGTATTCTTCATTGCTTTTGGCCAGGGTACATTGCCGTTTAGGCTGCTTGCTGCCCAATATGGAGCTGACATAACCTATGGAGAGGAGATTATTGATCATAAGATCATCAAATGTGAGCGGCGAGTTAATGGTAATTTCTTGTTCATCCTTTTGCATCCTTCGTCTGGATTATCCTTGAACATTTTTCATGTAACATGTAAACTAAATACATACTACCTCTATTGAAAGAATGAAACGAACAGTTCCTAAAAATGCCAAGGCACCAATTACGTGACCACTATTGTTCTTATTCAAGACCCTTTCTTTGATGAATATAACCTTGGTTTGAATGTGATGTATATGTCAATTTGAGTACTTCTATATTTCTAATGGATTATCAGATCTTATGCTTTTATGTTAATGAAAGAAGGATGTGAACTCTTAATTTCATCATGTTATGGCTCTCTAGTCTCTATCAAGAAAATGAGCCTTTTATTTGAAGAAATTTGATAACGAGAAGTTTTACATGGATCTGTGGCTTAAATGGAATATTTGAGAGATGATTGAGCATTTACTGATGATAGTTAATATCGGAACGTTAAAACCTTGAACTGAATATTTTAGTGTGAGTTGATTGCCCCTCGAATACCAAACAAGGATTTGTAAATTATTATATAGGTCGTGTACAGTGGTGGAGCCACCTTGTTCTCACGGGGTTCATCCGAACCCCCTTCACCGGAAAATTAGTACTATTTATATATGGTTAAAATTATTTTTTAGGTATACATAGTAAATGTCGAACCCCCTCGACTATTTCGTTTGTCTATTTCTTCAGATTTTGAACCCCCTTATTGAAAAAATCTTCATGTATATTGACATAGTATAGATGACATCTGATACCTGATTCAGTAGCTTTCCAAGCGGAGAAGATTTATTCAAAGTCATTACTCTGTAAAGGCTTTATGACTTGCTGTATATGTTGTTGACTTTGCAGTTAGCATTATGCTTTATGCCTTGCATTTTACTTCATATTTTTATTTTTAGGTATTATGAGCATAGATGAATAGGATTCACAGTCACTTATGAAAAAGAAACGAAAAGATAAATATCATAGTGAAGCCTGCCTTTAGATGCAGGTTACCTAGTACATTTGAGATGGCAAAAGAAAAAAGTTGCTAAACTCGATGCTTCTAAAATATTTCTCATGAGTTTTACCCCTTATTCCTTAGATGTCTTAGGGACTACTGACATAGTGGAGAAGGGAACTGATAATGTTGTTTTCAGAACGTGCCCCGAGGAGAGAAATCGAGTTGTATTTCAGATGGGCACTTCTGATGCCATGAGGGCTCTCAAAGCTGCTGAAATAGTGTATGTTCCATTCAGTTCTTTCTTTTTTCCTCCCTTATCATAACTAATTTTCGTACTTTAAATCCATCTGCTCTCCTCCCCCCCCCCCTCCCCCCCCCTCACGCACACACAATCTGTTTTTCACATGGTCATACACAGAGTCTTATAGACAGACAGATTGGATTGGATTCCTATGATGAAATCTCGCTCTTGTTTCCACTTGTTTTATTTTCAATATGCGTCTTCTAGCATTTTTGGTGGTATTTCTTTTTAAGTAATGTGATGCATTATGTAGTATATCTCTGTTGGTTATGTAAGAACTCGTATGGTTGAGTTTATGAACAGACAAGCAGTTTCTCTAGCGAAACCAGATACCCTCACCTCCATCCACACCCAAAAAAGGCAAAAAAGACAAACATTCATTTTGAGCAAATACAAATGCCATTAATTAATAACTCCTTTCTGCCGGTTTGGGGTTCCTAATAGGTTGTGTCATTCTCTTGCTGAGTATAGTGGCACCTGCATAAGTCTTCTTGTGCCATGAAACGTTTTCTTGATAACAACAGATATTATTGGGGGGTTTTACAAGGGGTGAGGTAGAGTATGTATGTCCTAATTTCCATACTGAACATCAAGGTTAGAAGTGGTCTTGTTGGATTTAAGAGGTAGATTTCATATATTCCAGTTCTCTATATTATACATCAATGTTAGAAATGTTCTTGTTGGAATTCTTTACTAATTTGCTTGAGGAACTGTCCTTTTTCTTTGATGAAGTAATGTGTTTTGTTAAGGAGCATCTAGAAGATGCAACTTACTAAAGAAATCTGCTAGCAATTACTAGTAAAGTGAAGTTGCAATTCCTTATACAAAGTGCTACCCTAAGCGTAGGGAGCTTACAATCTGAAAAAATGGTCGGGGCTAGTTACAGACTCATAGGTGTCAATTTAATCAGGCAAAACAGACTTAGCAGTCACTTTGCTTTGAGGGAAGAGTTTTGAGTTGAAATACCATCAAAGCATCTACTGTTTCTTTCAATCCACAGACACCAAAAAATTTATTCCAGGAATCATTACCCGGATCTTCTTGATGGCCTTGTCAACTCTCAAGTGGCAGTGTGGCACCAGCTTGAATAAGCTTCCTTCACATGCACAACATCACCCATTTCAGCCCAAGGAGGAAAAATAGAAATTATTGAGGAACTGTTTTTGAAGCTGGACTCTCTGCTTTTGCTTTTCATTTTGTCAAATGATGTCATCGTTTTCTGCATTGGAAGTCTAGATTTTTAAGTTTTTCATGTTGTTAGCAGTATTTAGAATCGACTTTTCTGACATTAATTGGATGATGGATATAGCTGATGTTCGTTTATAAATAACAGGCTTGTCAGAGTTAAATTTATTAATGTTGAACTGCAACAAGCTGCAGTGATATGAATTCGCTTCTCCAACAATTTTCTCTATATTGAATAGCTATCATAATATTCTGTGAATTGCATTCTTATCATGATTCTTAATATACTTTCTTAAGATAGTGAAGAAACTTCAAAGCACATGCTTGAGTTTCTTTGCTCTTTTTAGGTCTTTACTTCTGACTTGGTCATGAAAGCTTAAACCAGCAATTATGCTCGATATGGGTAGGAAGTTAGTGCATCTGATCGAATTATTTGATGGTCTGTCCCTTTTCAGGTGTAAGGATGTAGCAGCAGTTGACGTAAACATGGGATGCCCCAAGTCATTCTCTATTAGTGGAGGCATGGGTGCTGCACTGTTGAGCAAACCAGAGCTCATCCATGATGTATGCAATTACTGTTGCTCCTTCATCAGTATCCGAGTTTCCTTCTAATATAGCATAGGAGTGCATGTCCTGTTCATAATGCTTCCCTTCTTCTGAACTCAGATTTTGACAACATTGCGAAGGAACTTGGATGTACCAATAACATGCAAAATTAGGTTATTAAAAGATCCGCAAGATACAGTGGAATTGGCACGACGAATTGAGATGACTGGTGTCTCTGCTCTTGCTGTCCATGGAAGGTACATGATTTCTGTATATCTGCTTCTCATGTTTTTTATAAACTTAACCTTGTGCTCTGTCATCAATTAAGCCTTTGTATATCCAGTAATCCAGATTCCTACTTTGATGGTCAAGTTATTTCATATAGTTGTTGGAGTATTTTTGTGAAACGAGGTGGGGCTTGCTGTAGATTCAAACAGTCCACCTTAGAAGCGAGAGAAGAACCATTTAGTCTGCTTCTTGGTTATGTTGGAAAGTATTGTCTCTTCTGTATGTTATTGCTACTTTCCCCGATTACTCTCTCCTTTCACTTTTTGTGATTGTGAATTTTAACTAATATTGAAGTTTCATTGTGAAGATGCCAATTCATGAATTACTAACCACATCTAGGGTTAACAGGATTGTTTTAGGTTCTGATCTTCCTTCCATTTGCTGAGGGGTGGGTTCCATGAATTATGTTGTGCTATCTTTATGTGTAGCCAGTGCTAGAAGATTTAAAATACAGAAATTGAACATGCTATACTTGGAAACGATGTCAAAACTGATTTATTGAGGGTGCAATTGATAATTCTCTCGCAGCTACTCTTACTATGTCTCTGTTACACAGAATATGGTCACGGCTCATTTTTGTTTGTTTTTTGTTTGGGATAAGGAGTCTTCACTGGTTGCTTGTTTGAGCTTCCTCCTATTTTGGGCTTTTAACTTGAAGTGGAGTGATATTAGTATTTCCTCTGACTAGCAAATGTTGCATGATTGTTGATTGAACTACAGGAAAGTTCCAGATAGGCCAAGAGATCCTGCAAAGTGGAATGAGATTGCTGATGTTGCTGCCGCTCTCTCTATTCCAGTTATAGCAAATGGTGATGTTTTTGAATA</genome_strand>
        <mrna_strand>CGGACCCTTCCGCGGCGCCGCTCGTCAATTGCAACCACTCCGATACTCCGCCGTGGTTGGTCGCCGCCGGCTGGGAAAATTCTTCCTCTCTTTTCAAGTCAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATCGCACTAACTTATCTGCCTCGTCAGAATGATGGATTACAGAAACAAGCTAGTCTTGGCTCCAATGGTCCGAGTG...........................................................................................................................................................................................GGTACATTGCCGTTTAGGCTGCTTGCTGCCCAATATGGAGCTGACATAACCTATGGAGAGGAGATTATTGATCATAAGATCATCAAATGTGAGCGGCGAGTTAATG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTAAGGATGTAGCAGCAGTTGACGTAAACATGGGATGCCCCAAGTCATTCTCTATTAGTGGAGGCATGGGTGCTGCACTGTTGAGCAAACCAGAGCTCATCCATGAT......................................................................................................ATTTTGACAACATTGCGAAGGAACTTGGATGTACCAATAACATGCAAAATTAGGTTATTAAAAGATCCGCAAGATACAGTGGAATTGGCACGACGAATTGAGATGACTGGTGTCTCTGCTCTTGCTGTCCATGGAAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGTTCCAGATAGGCCAAGAGATCCTGCAAAGTGGAATGAGATTGCTGATGTTGCTGCCGCTCTCTCTATTCCAGTTATAGCAAATGGTGATGTTTTTGAATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0117B06-OI86t/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U338317" ref_strand="+" ref_description="SGN-U338317        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: | Symbol: None | nitrogen regulation family protein, similar to NITROGEN REGULATION PROTEIN NIFR3 (SP:Q08111) (Rhodobacter capsulatus); contains Pfam domain PF01207: Dihydrouridine synthase (Dus) | chr3:18411764-18415791 REVERSE | Aliases: T9C5.230(evalue: 8e-75, score=201) genbank/nr: gi|15229183|ref|NP_190533.1| nitrogen regulation protein family (NIFR3) [Arabidopsis thaliana] gi|11358454|pir||T46241 hypothetical protein T9C5.230 - Arabidopsis thaliana gi|6561964|emb|CAB62468.1| putative protein [Arabidopsis thaliana](evalue: 6e-73, score=201)">
      <seq>gctcgtcaattgcaaccactccgatactccgtcgtggttggtcgccgccggctgggaaaattcttcctctcttttcaagtcaagcatcgcactaacttatctgcctcgtcagaatgatggattacagaaacaggctagtcttggctccaatggtccgagtgggtacattgccgtttaggctgcttgctgcccaatatggagctgacataacctatggagaggagattattgatcataagatcatcaaatgtgagcggcgagttaatgaacgtgccccgaggagagaaatcgagttgtatttcagatgggcacttctgatgccatgagggctctcaaagctgctgaaatagtgtgtaaagatgtagcagcagtggacgtaaacatgggatgccccaagtcattctctattactggaggcatgggtgctgcactgttgagcaaaccagagctcatccatgatattttgacaacattgcgaaggaacttggatgtaccaataacatgcaaaattaggttattaaaagatcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0117B06-OI86t/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0117B06.1" temp_strand="-" temp_description="C06HBa0117B06.1  AC211048.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0117B06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="76830" stop="71773"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76530" g_stop="76447" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="83" r_length="83" r_score="0.976"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="76446" i_stop="75601" i_length="846">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.985" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="75600" g_stop="75523" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="84" r_stop="161" r_length="78" r_score="0.987"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="75522" i_stop="75336" i_length="187">
            <donor d_prob="0.953" d_score="0.98"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="75335" g_stop="75230" g_length="106"/>
          <reference_exon_boundary r_type="cDNA" r_start="162" r_stop="267" r_length="106" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="75229" i_stop="74097" i_length="1133">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="74096" g_stop="74013" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="268" r_stop="351" r_length="84" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="74012" i_stop="72352" i_length="1661">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="72351" g_stop="72243" g_length="109"/>
          <reference_exon_boundary r_type="cDNA" r_start="352" r_stop="460" r_length="109" r_score="0.972"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="72242" i_stop="72141" i_length="102">
            <donor d_prob="0.968" d_score="0.98"/>
            <acceptor a_prob="0.186" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="72140" g_stop="72073" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="461" r_stop="528" r_length="68" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0117B06.1" gen_strand="-" ref_id="SGN-U338317" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>529</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0117B06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U338317" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76530" e_stop="76447"/>
          <exon e_start="75600" e_stop="75523"/>
          <exon e_start="75335" e_stop="75230"/>
          <exon e_start="74096" e_stop="74013"/>
          <exon e_start="72351" e_stop="72243"/>
          <exon e_start="72140" e_stop="72073"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTCGTCAATTGCAACCACTCCGATACTCCGCCGTGGTTGGTCGCCGCCGGCTGGGAAAATTCTTCCTCTCTTTTCAAGTCAAGGTCAGTAACAACTGTTGACCTGCTCTTTCTCTTTACTGGTCAATGTTTATATTTAGAGACGAGAGACTCATCAGTATTATTTTTTTAAACTTTACTGAGCAAATACTGTAAGATCCGAAGCTATATATGTAAATTGTATCGTTGAAGTCTAATTGTCCCTCGGAATTTGCAATTGCTGAAACGTAGGTTGGCTTTGAGTGAGAGCATCAGGATTTTATTTGACAGCTGATGTTTTGATTGAATAAATTTCTGTTCTTAATTGTCCATATAACGTAAGATCCAAATCTGTATATACATTGTGTTTCTTAAATGCTAGCCATGGTCAGGAATTATGTACAATTTGTTACTTGCTCAGTCTATTTTTACTTGTCCATGAAACAAAGTCAATAATTTGGAAAATAAGTATAGATAATAATAAGGGTAAAATTATTTGGGATGACCTAGTGATTTGAGCTTGGGACTTCCACGTTGGATATCTCAAGTTTGTAACCCCTTGCCAATAAAAATAAGAGGTTTGCCTTTTGGGTTGAGCTCATTACCCGGGGCTTGCCTAATGCGGATTACCTATCGTGTGTAGTTTGGGAGCTGTGGTGTGCACCCAAAGGTAGCGGCTACAGTTTCCCTTGTCATATAAGAAAGAAAAAAAAAGTAATAAGGGTAAAATGGTAAATTATCTTTTAATTTTCTTAACTGGACTAGTAAAATTGGACATCTTTTTTAAGTGTAGTGGACAATAAAAATGGATGGAGAGAATAATTTATAAGCATAACAGCTATTCGTAACCTGTAACTCTTTGTACAGTATACTGACTATACTCAATTTGGTCAATGTATACTATTGTCTCAGGCATCGCACTAACTTATCTGCCTCGTCAGAATGATGGATTACAGAAACAAGCTAGTCTTGGCTCCAATGGTCCGAGTGGTAAGTACCTTCAAGTGAATTTAAATTAGAGCAGTCCTGTTTTGGTACTTCATGTTCCCATTTCTAGATGTGTGTGGCTCTTTTTAAATTCACCAGGAAGCATAGTTAAAACTGCTCTTAATGTGTTTTTTACTTTACTAAATGATGCTTTAAATGCCCATGTGTATTCTTCATTGCTTTTGGCCAGGGTACATTGCCGTTTAGGCTGCTTGCTGCCCAATATGGAGCTGACATAACCTATGGAGAGGAGATTATTGATCATAAGATCATCAAATGTGAGCGGCGAGTTAATGGTAATTTCTTGTTCATCCTTTTGCATCCTTCGTCTGGATTATCCTTGAACATTTTTCATGTAACATGTAAACTAAATACATACTACCTCTATTGAAAGAATGAAACGAACAGTTCCTAAAAATGCCAAGGCACCAATTACGTGACCACTATTGTTCTTATTCAAGACCCTTTCTTTGATGAATATAACCTTGGTTTGAATGTGATGTATATGTCAATTTGAGTACTTCTATATTTCTAATGGATTATCAGATCTTATGCTTTTATGTTAATGAAAGAAGGATGTGAACTCTTAATTTCATCATGTTATGGCTCTCTAGTCTCTATCAAGAAAATGAGCCTTTTATTTGAAGAAATTTGATAACGAGAAGTTTTACATGGATCTGTGGCTTAAATGGAATATTTGAGAGATGATTGAGCATTTACTGATGATAGTTAATATCGGAACGTTAAAACCTTGAACTGAATATTTTAGTGTGAGTTGATTGCCCCTCGAATACCAAACAAGGATTTGTAAATTATTATATAGGTCGTGTACAGTGGTGGAGCCACCTTGTTCTCACGGGGTTCATCCGAACCCCCTTCACCGGAAAATTAGTACTATTTATATATGGTTAAAATTATTTTTTAGGTATACATAGTAAATGTCGAACCCCCTCGACTATTTCGTTTGTCTATTTCTTCAGATTTTGAACCCCCTTATTGAAAAAATCTTCATGTATATTGACATAGTATAGATGACATCTGATACCTGATTCAGTAGCTTTCCAAGCGGAGAAGATTTATTCAAAGTCATTACTCTGTAAAGGCTTTATGACTTGCTGTATATGTTGTTGACTTTGCAGTTAGCATTATGCTTTATGCCTTGCATTTTACTTCATATTTTTATTTTTAGGTATTATGAGCATAGATGAATAGGATTCACAGTCACTTATGAAAAAGAAACGAAAAGATAAATATCATAGTGAAGCCTGCCTTTAGATGCAGGTTACCTAGTACATTTGAGATGGCAAAAGAAAAAAGTTGCTAAACTCGATGCTTCTAAAATATTTCTCATGAGTTTTACCCCTTATTCCTTAGATGTCTTAGGGACTACTGACATAGTGGAGAAGGGAACTGATAATGTTGTTTTCAGAACGTGCCCCGAGGAGAGAAATCGAGTTGTATTTCAGATGGGCACTTCTGATGCCATGAGGGCTCTCAAAGCTGCTGAAATAGTGTATGTTCCATTCAGTTCTTTCTTTTTTCCTCCCTTATCATAACTAATTTTCGTACTTTAAATCCATCTGCTCTCCTCCCCCCCCCCCTCCCCCCCCCTCACGCACACACAATCTGTTTTTCACATGGTCATACACAGAGTCTTATAGACAGACAGATTGGATTGGATTCCTATGATGAAATCTCGCTCTTGTTTCCACTTGTTTTATTTTCAATATGCGTCTTCTAGCATTTTTGGTGGTATTTCTTTTTAAGTAATGTGATGCATTATGTAGTATATCTCTGTTGGTTATGTAAGAACTCGTATGGTTGAGTTTATGAACAGACAAGCAGTTTCTCTAGCGAAACCAGATACCCTCACCTCCATCCACACCCAAAAAAGGCAAAAAAGACAAACATTCATTTTGAGCAAATACAAATGCCATTAATTAATAACTCCTTTCTGCCGGTTTGGGGTTCCTAATAGGTTGTGTCATTCTCTTGCTGAGTATAGTGGCACCTGCATAAGTCTTCTTGTGCCATGAAACGTTTTCTTGATAACAACAGATATTATTGGGGGGTTTTACAAGGGGTGAGGTAGAGTATGTATGTCCTAATTTCCATACTGAACATCAAGGTTAGAAGTGGTCTTGTTGGATTTAAGAGGTAGATTTCATATATTCCAGTTCTCTATATTATACATCAATGTTAGAAATGTTCTTGTTGGAATTCTTTACTAATTTGCTTGAGGAACTGTCCTTTTTCTTTGATGAAGTAATGTGTTTTGTTAAGGAGCATCTAGAAGATGCAACTTACTAAAGAAATCTGCTAGCAATTACTAGTAAAGTGAAGTTGCAATTCCTTATACAAAGTGCTACCCTAAGCGTAGGGAGCTTACAATCTGAAAAAATGGTCGGGGCTAGTTACAGACTCATAGGTGTCAATTTAATCAGGCAAAACAGACTTAGCAGTCACTTTGCTTTGAGGGAAGAGTTTTGAGTTGAAATACCATCAAAGCATCTACTGTTTCTTTCAATCCACAGACACCAAAAAATTTATTCCAGGAATCATTACCCGGATCTTCTTGATGGCCTTGTCAACTCTCAAGTGGCAGTGTGGCACCAGCTTGAATAAGCTTCCTTCACATGCACAACATCACCCATTTCAGCCCAAGGAGGAAAAATAGAAATTATTGAGGAACTGTTTTTGAAGCTGGACTCTCTGCTTTTGCTTTTCATTTTGTCAAATGATGTCATCGTTTTCTGCATTGGAAGTCTAGATTTTTAAGTTTTTCATGTTGTTAGCAGTATTTAGAATCGACTTTTCTGACATTAATTGGATGATGGATATAGCTGATGTTCGTTTATAAATAACAGGCTTGTCAGAGTTAAATTTATTAATGTTGAACTGCAACAAGCTGCAGTGATATGAATTCGCTTCTCCAACAATTTTCTCTATATTGAATAGCTATCATAATATTCTGTGAATTGCATTCTTATCATGATTCTTAATATACTTTCTTAAGATAGTGAAGAAACTTCAAAGCACATGCTTGAGTTTCTTTGCTCTTTTTAGGTCTTTACTTCTGACTTGGTCATGAAAGCTTAAACCAGCAATTATGCTCGATATGGGTAGGAAGTTAGTGCATCTGATCGAATTATTTGATGGTCTGTCCCTTTTCAGGTGTAAGGATGTAGCAGCAGTTGACGTAAACATGGGATGCCCCAAGTCATTCTCTATTAGTGGAGGCATGGGTGCTGCACTGTTGAGCAAACCAGAGCTCATCCATGATGTATGCAATTACTGTTGCTCCTTCATCAGTATCCGAGTTTCCTTCTAATATAGCATAGGAGTGCATGTCCTGTTCATAATGCTTCCCTTCTTCTGAACTCAGATTTTGACAACATTGCGAAGGAACTTGGATGTACCAATAACATGCAAAATTAGGTTATTAAAAGATCC</genome_strand>
        <mrna_strand>GCTCGTCAATTGCAACCACTCCGATACTCCGTCGTGGTTGGTCGCCGCCGGCTGGGAAAATTCTTCCTCTCTTTTCAAGTCAA-..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATCGCACTAACTTATCTGCCTCGTCAGAATGATGGATTACAGAAACAGGCTAGTCTTGGCTCCAATGGTCCGAGTG...........................................................................................................................................................................................GGTACATTGCCGTTTAGGCTGCTTGCTGCCCAATATGGAGCTGACATAACCTATGGAGAGGAGATTATTGATCATAAGATCATCAAATGTGAGCGGCGAGTTAATG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGTGCCCCGAGGAGAGAAATCGAGTTGTATTTCAGATGGGCACTTCTGATGCCATGAGGGCTCTCAAAGCTGCTGAAATAGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTAAAGATGTAGCAGCAGTGGACGTAAACATGGGATGCCCCAAGTCATTCTCTATTACTGGAGGCATGGGTGCTGCACTGTTGAGCAAACCAGAGCTCATCCATGAT......................................................................................................ATTTTGACAACATTGCGAAGGAACTTGGATGTACCAATAACATGCAAAATTAGGTTATTAAAAGATCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0117B06-OI86t/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U343181" ref_strand="+" ref_description="SGN-U343181        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: | Symbol: None | expressed protein, similar to KED (GI:8096269) (Nicotiana tabacum); similar to rRNA processing protein EBP2 (SP:P36049) (Saccharomyces cerevisiae) | chr1:4306057-4307845 FORWARD | Aliases: T12C24.18, T12C24_18(evalue: 2e-21, score=99.4) genbank/nr: unknown(evalue: 1e-22, score=109)">
      <seq>tcaagtaaaataagattcgatgactctgatgaacatgaatcttcatctgaagatgaggaggagaaggggattgaggaggaccttgctgatgtgacctttgaagaattgccaagagcacggactgatggatcagctacagtgtataggaagcttaattctgaaggaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0117B06-OI86t/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0117B06.1" temp_strand="-" temp_description="C06HBa0117B06.1  AC211048.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0117B06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="101307" stop="100540"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="101007" g_stop="100840" g_length="168"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="168" r_length="168" r_score="0.970"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0117B06.1" gen_strand="-" ref_id="SGN-U343181" ref_strand="+">
        <total_alignment_score>0.970</total_alignment_score>
        <cumulative_length_of_scored_exons>168</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0117B06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U343181" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="101007" e_stop="100840"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAAGTAAAATAAGATTCGATGACTCTGATGAACATGAATCTTCATCTGAAGATGAGGAGGAGAAGGGGATTGAGGAGGAGCTTGCTGATGTGACCTTTGAAGAATTGCAGAGAGCACGGTCTGATGGATCAGCTACAGTGTATAGGAAGCTTAATTCGGAAGGAAAA</genome_strand>
        <mrna_strand>TCAAGTAAAATAAGATTCGATGACTCTGATGAACATGAATCTTCATCTGAAGATGAGGAGGAGAAGGGGATTGAGGAGGACCTTGCTGATGTGACCTTTGAAGAATTGCCAAGAGCACGGACTGATGGATCAGCTACAGTGTATAGGAAGCTTAATTCTGAAGGAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0117B06-OI86t/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U335173" ref_strand="+" ref_description="SGN-U335173        Tomato 200607 #1 [1 ESTs aligned] genbank/nr: beta-galactosidase(evalue: 3e-30, score=135)">
      <seq>ttcttttcaatagtgttggtaagtcaagcaagtcacagacggaatcctcaggtcccgagcccatgatcgaaagctgagaagttcatattactatcaaattggatgtagaccaatttggtgcaatttctaggtttctttttgcagttgactatatacatctttgactctatttgtgcagcctacaaagaggtgatagtttacgatgattggctctcttagatatcatgacttttgctgttcaatgttatggaagatttcgtcaagtctttcacaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0117B06-OI86t/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0117B06.1" temp_strand="-" temp_description="C06HBa0117B06.1  AC211048.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0117B06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="114496" stop="113623"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="114196" g_stop="113923" g_length="274"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="274" r_length="274" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="113922" i_stop="113860" i_length="63">
            <donor d_prob="0.132" d_score="1.00"/>
            <acceptor a_prob="0.785" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="113859" g_stop="113852" g_length="8"/>
          <reference_exon_boundary r_type="cDNA" r_start="275" r_stop="282" r_length="8" r_score="0.625"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0117B06.1" gen_strand="-" ref_id="SGN-U335173" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>282</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0117B06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U335173" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="114196" e_stop="113923"/>
          <exon e_start="113859" e_stop="113852"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCTTTTCAATAGTGTTGGTAAGTCAAGCAAGTCACAGACGGAATCCTCAGGTCCCGAGCCCATGATCGAAAGCTGAGAAGTTCATATTACTATCAAATTGGATGTAGACCAATTTGGTGCAATTTCTAGGTTTCTTTTTGCAGTTGACTATATACATCTTTGACTCTATTTGTGCAGCCTACAAAGAGGTGATAGTTTACGATGATTGGCTCTCTTAGATATCATGACTTTTGCTGTTCAATGTTATGGAAGATTTCGTCAAGTCTTTCACAAGTTCTTTTCCTTTTGTTAATTATAAGTTCAGTTAATCGACATGTTTGGTTTGGTGCTTCAAAGGAAAAATC</genome_strand>
        <mrna_strand>TTCTTTTCAATAGTGTTGGTAAGTCAAGCAAGTCACAGACGGAATCCTCAGGTCCCGAGCCCATGATCGAAAGCTGAGAAGTTCATATTACTATCAAATTGGATGTAGACCAATTTGGTGCAATTTCTAGGTTTCTTTTTGCAGTTGACTATATACATCTTTGACTCTATTTGTGCAGCCTACAAAGAGGTGATAGTTTACGATGATTGGCTCTCTTAGATATCATGACTTTTGCTGTTCAATGTTATGGAAGATTTCGTCAAGTCTTTCACAA...............................................................AAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0117B06-OI86t/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U315481" ref_strand="+" ref_description="SGN-U315481        Tomato 200607 #1 [6 ESTs aligned] arabidopsis/peptide: | Symbol: None | COP9 signalosome subunit 5A / CSN subunit 5A (CSN5A) / c-JUN coactivator protein AJH2, putative (AJH2), COP9 complex subunit CSN5-2; identical to c-Jun coactivator protein AJH2 GI:3641312 from (Arabidopsis thaliana); identical to cDNA CSN complex subunit 5A (CSN5A) GI:18056660; contains Pfam profile PF01398: Mov34/MPN/PAD-1 family | chr1:26856123-26858058 FORWARD | Aliases: F3I17.12, F3I17_12(evalue: 2e-144, score=508) genbank/nr: gi|12002865|gb|AAG43411.1| JAB [Lycopersicon esculentum](evalue: 7e-165, score=582)">
      <seq>ctgaagttacaatggactctctgaattcttacgcatcgtcggcggcgatggcgcagcaaacctgggagttagagaacaacatcgtaacaatcgacgcgccgtcggggtcgaaaccggaaaactccgcgtcggacgctatattccactacgacgatgcggcacagacgaagtttcagcgggagaagccgtgggcgagtgaccctcactacttcaagcgtgtgaagatctctgctcttgctcttctcaagatggttgttcacgcgcgttccggaggtacaattgaggtcatgggactcatgcagggtaagactgacggcgatgccatcattgtaatggacgcttttgccctccccgttgaaggcactgaaactagggttaatgctcaagctgatgcgtatgaatatatggtcgaatattcacagaccaacaagcaggctggtcgtttggaaaatgtggtcgggtggtaccattcccatcctggttatggatgctggctctctggcattgatgtatctacccaaatgctcaaccagcaatatcaggaaccctttcttgcagttgttattgatccaacaagaactgtttctgctggaaaagttgagattggtgcctttcgaacatatcctgaaggatataaacctccagatgaccccatctcggagtaccagaccattcctttgaacaaaatcgaagactttggagtacattgcaagcagtattattcattggatattacatattttaagtcttctctcgattgtcgtctcttggacctactatgggacaagtattgggtgaacacactttcatcatctcctttgcttggaaatggagactatgttgctggacagatatctgatcttgctgaaaagttggagcatgctgaaaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0117B06-OI86t/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0117B06.1" temp_strand="-" temp_description="C06HBa0117B06.1  AC211048.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0117B06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="118834" stop="116489"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="118534" g_stop="118101" g_length="434"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="434" r_length="434" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="118100" i_stop="117474" i_length="627">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.888" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="117473" g_stop="117192" g_length="282"/>
          <reference_exon_boundary r_type="cDNA" r_start="435" r_stop="716" r_length="282" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="117191" i_stop="117084" i_length="108">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="117083" g_stop="116936" g_length="148"/>
          <reference_exon_boundary r_type="cDNA" r_start="717" r_stop="864" r_length="148" r_score="0.993"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="116935" i_stop="116815" i_length="121">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="116814" g_stop="116789" g_length="26"/>
          <reference_exon_boundary r_type="cDNA" r_start="865" r_stop="890" r_length="26" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0117B06.1" gen_strand="-" ref_id="SGN-U315481" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>890</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0117B06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U315481" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="118534" e_stop="118101"/>
          <exon e_start="117473" e_stop="117192"/>
          <exon e_start="117083" e_stop="116936"/>
          <exon e_start="116814" e_stop="116789"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGAAGTTACAATGGACTCTCTGAATTCTTACGCATCGTCGGCGGCGATGGCGCAGCAAACCTGGGAGTTAGAGAACAACATCGTAACAATCGACGCGCCGTCGGGGTCGAAACCGGAAAACTCCGCGTCGGACGCTATATTCCACTACGACGATGCGGCACAGACGAAGTTTCAGCGGGAGAAGCCGTGGGCGAGTGACCCTCACTACTTCAAGCGTGTGAAGATCTCTGCTCTTGCTCTTCTCAAGATGGTTGTTCACGCGCGTTCCGGAGGTACAATTGAGGTCATGGGACTCATGCAGGGTAAGACTGACGGCGATGCCATCATTGTAATGGACGCTTTTGCCCTCCCCGTTGAAGGCACTGAAACTAGGGTTAATGCTCAAGCTGATGCGTATGAATATATGGTCGAATATTCACAGACCAACAAGCAGGTTAGTGCGTTTATAAAAAAAAAGATTAATTTTTTATGAGTATCTAGTATACTGTGAGCTTTAGAATAAACCTAGTCAATTTAGAATGAATTTGTTGGATTTATTGAATATTGGAATCAAACTGGTTCAGATGGAGCACAACTGTAGGTTGAAATAGTAAATGCCTTGAGTTTTAGAATTACTCCCTAAGTATTAGAATGTTACCGGTTCAAATGGAAACTAACTGAATTGTGAAGTTCGTATAGCAGATTCCAATTAGCTTGAGATTGAGGTTTTGTTCTCATTCGTGTGACGGTCCAATTTGCTTTGACTAGTTTGCCTAGCAGTCTGCTCTAGCTTACTTGACAACAGGGACTTGCAACTATTGTTGTAACTTTTTTGATTGACATATATGAAGAGGACAATCATATAAAACTTATTATCCTTGATTGTACACTAATCCCATTATGATATTTCATTCTGCTGGCTTGAATTTGTGATGTTTTCTCAGTGAAGAAGAGAATATTACCTAGTTTGATCCCGAAACCTAATGACCATGTCATGTTGTTGTGTTCGGTTCCTGAATTGGAGTGTGCTTGTTACTGCAGTTTGTTCTGACCATTCTCTTACTCAGACTTTTTGGTATAGGCTGGTCGTTTGGAAAATGTGGTCGGGTGGTACCATTCCCATCCTGGTTATGGATGCTGGCTCTCTGGCATTGATGTATCTACCCAAATGCTCAACCAGCAATATCAGGAACCCTTTCTTGCAGTTGTTATTGATCCAACAAGAACTGTTTCTGCTGGAAAAGTTGAGATTGGTGCCTTTCGAACATATCCTGAAGGATATAAACCTCCAGATGACCCCATCTCGGAGTACCAGACCATTCCTTTGAACAAAATCGAAGACTTTGGAGTACATTGCAAGCAGGTCTCCTCTTTGGCATGAGCGCTTGCACTCGCACACATATTAGAATCTAGGTCTTCAACTCTGCTTCACTCTGACTGTTAGCTTACCAGCTTTTCTCTCGATTTGCAGTATTATTCATTGGATATTACATATTTTAAGTCTTCTCTCGATTGTCGTCTCTTGGACCTACTATGGAACAAGTATTGGGTGAACACACTTTCATCATCTCCTTTGCTTGGAAATGGAGACTATGTTGCTGGACAGATATCTGATCTTGGTAATATCATTATTGCCTACATTTTCCACTTTCTTTTATCATCATAATGATTTCATTCCTGCATATGAGTTTTCATGATATTGTAACACCTAAAATTAGTTGATCCCATTAAATCATGCAGCTGAAAAGTTGGAGCATGCTGAAAAT</genome_strand>
        <mrna_strand>CTGAAGTTACAATGGACTCTCTGAATTCTTACGCATCGTCGGCGGCGATGGCGCAGCAAACCTGGGAGTTAGAGAACAACATCGTAACAATCGACGCGCCGTCGGGGTCGAAACCGGAAAACTCCGCGTCGGACGCTATATTCCACTACGACGATGCGGCACAGACGAAGTTTCAGCGGGAGAAGCCGTGGGCGAGTGACCCTCACTACTTCAAGCGTGTGAAGATCTCTGCTCTTGCTCTTCTCAAGATGGTTGTTCACGCGCGTTCCGGAGGTACAATTGAGGTCATGGGACTCATGCAGGGTAAGACTGACGGCGATGCCATCATTGTAATGGACGCTTTTGCCCTCCCCGTTGAAGGCACTGAAACTAGGGTTAATGCTCAAGCTGATGCGTATGAATATATGGTCGAATATTCACAGACCAACAAGCAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGGTCGTTTGGAAAATGTGGTCGGGTGGTACCATTCCCATCCTGGTTATGGATGCTGGCTCTCTGGCATTGATGTATCTACCCAAATGCTCAACCAGCAATATCAGGAACCCTTTCTTGCAGTTGTTATTGATCCAACAAGAACTGTTTCTGCTGGAAAAGTTGAGATTGGTGCCTTTCGAACATATCCTGAAGGATATAAACCTCCAGATGACCCCATCTCGGAGTACCAGACCATTCCTTTGAACAAAATCGAAGACTTTGGAGTACATTGCAAGCAG............................................................................................................TATTATTCATTGGATATTACATATTTTAAGTCTTCTCTCGATTGTCGTCTCTTGGACCTACTATGGGACAAGTATTGGGTGAACACACTTTCATCATCTCCTTTGCTTGGAAATGGAGACTATGTTGCTGGACAGATATCTGATCTTG.........................................................................................................................CTGAAAAGTTGGAGCATGCTGAAAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0117B06-OI86t/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U345157" ref_strand="+" ref_description="SGN-U345157        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: | Symbol: None | similar to hypothetical protein [Arabidopsis thaliana] (TAIR:At5g07170.1); similar to B1158C05.16 [Oryza sativa (japonica cultivar-group)] (GB:NP_917835.1) | chr5:16248482-16251536 REVERSE | Aliases: MNF13.3, MNF13_3(evalue: 3e-12, score=69.7) genbank/nr: unknown(evalue: 2e-10, score=69.7)">
      <seq>catctttctgatcttcctcagaattgcaagtcagatcctaatatctcatacagccaagcagaaagtgtcggcgagataaaccaaagtgattttcagtcaccaatcactgctagtcgagatgatggtttatcctctctggtttcatccaaacacaagttgagcgtcaagattgagtcaatgtataccgatggagtagattcaatttattccaattggtttgacaattcctcatcattcttagaatcaaaagcttctgaagtcacaaagagtatgagtggtaaagatatccatttaagaaacataggccatcaagaaggaagggattcatgctcatctttttcaaccagagatcaaaatagttttgctacacatttctcacctaatgaagtatcaggcaggaataatatggaggaaaaagtaactgtcggggacttgggatgtacaccaccaaaatttacatcgtcgaagtgttcagaagaaaaaagcgtatcacttcacaggcaaaacttgagtagaaatcagtatcttcttatccaggaaggttctgatgaaacaagtgtggttgcttatagtcttgtcggctgtattttaaataagttcgctcagatggatgggttacagttatctgaggacaatgtatcatatctccaaggcaacacttcagatcccaaaatttttgaagttctcaagaacaggcgaagttcttgtggtgagaccactaattccattatgctccatgctcttgaagagataattccttcttttgcaaacagtagtaaagaacaactgaaggagttgttggatgtggagtagcctctgaagcctcgaggcattgattggagcatagctcaagatctcaattacgtagaggctttgctagattttgttggtgacgatatctagcaaggacaacggtttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0117B06-OI86t/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0117B06.1" temp_strand="-" temp_description="C06HBa0117B06.1  AC211048.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0117B06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="123408" stop="120182"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="123109" g_stop="122428" g_length="682"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="682" r_length="682" r_score="0.999"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="122427" i_stop="121683" i_length="745">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.983" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="121682" g_stop="121592" g_length="91"/>
          <reference_exon_boundary r_type="cDNA" r_start="683" r_stop="773" r_length="91" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="121591" i_stop="120628" i_length="964">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="120627" g_stop="120482" g_length="146"/>
          <reference_exon_boundary r_type="cDNA" r_start="774" r_stop="919" r_length="146" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0117B06.1" gen_strand="-" ref_id="SGN-U345157" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>919</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0117B06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U345157" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="123109" e_stop="122428"/>
          <exon e_start="121682" e_stop="121592"/>
          <exon e_start="120627" e_stop="120482"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATCTTTCTGATCTTCCTCAGAATTGCAAGTCAGATCCTAATATCTCATACAGCCAAGCAGAAAGTGTCGGCGAGATAAACCAAAGTGATTTTCAGTCACCAATCACTGCTAGTCGAGATGATGGTTTATCCTCTCTGGTTTCATCCAAACACAAGTTGAGCGTCAAGATTGAGTCAATGTATACCGATGGAGTAGATTCAATTTATTCCAATTGGTTTGACAATTCCTCATCATTCTTAGAATCAAAAGCTTCTGAAGTCACAAAGAGTATGAGTGGTAAAGATATCCATTTAAGAAACATAGGCCATCAAGAAGGAAGGGATTCATGCTCATCTTTTTCAACCAGAGATCAAAATAGTTTTGCTACACATTTCTCACCTAATGAAGTATCAGGCAGGAATAATATGGAGGAAAAAGTAACTGTCGGGGACTTGGGATGTACACCACCAAAATTTACATCGTCGAAGTGTTCAGAAGAAAAAAGCGTATCACTTCACAGGCAAAACTTGAGTAGAAATCAGTATCTTCTTATCCAGGAAGGTTCTGATGAAACAAGTGTGGTTGCTTATAGTCTTGTCGGCTGTATTTTAAATAAGTTCGCTCAGATGGATGGGTTACAGTTATCTGAGGACAATGTATCATATCTCCAAGGCAACACTTCAGATCCCAAAATTTTTGAAGGTACTTGAACACTAAACTCTCCTTGTGCTGCTTCTACCGTCTCTATGGTATGAGAAAGGAAATGAGATGTTAGGTTTTTTTTTTCTTATTTCTTTTTTTGCATACTCAGAACTAGCTTGGAATTGAGGCCTAGTTGTTGTTACCTCTTTTCAATCTTCTTTTTTGGTGTGGGAGGGTAAGATATTAGAAATGAGAAGGGGTATTGATGGGGTCTGAACCTTGTTCCTGAATGAGTATCGATTAAGCAACAAACCTCTTGTAAAGGAGAAGAGAAAATGAAGGCAGAAATGTAAACCAAACAACTTAGGCCCATGATCCATCTATGATGTGTGGTTCAGTTGTGAACATTCAGGGGGTAGAATGGTTGTTTATTATCTGAAAAAGTTCTGTTTGAGTGAGAAACTGATACAGTGATATGGTACATTCTGGATCCTATCATTTGTAATCTCTAAAAGGGAAGCGTTTGTAAATTTCTCCAAGTTATTTCGTTATTGCTGAGACCCTAAAAAGGACGAAGTTATGAATGATTTGAGATAGCTAGAATGCTTTCAAGGAAGTGTCGGATTTAATGTGATTTTGCTATCACTTCGACATAATTCAAAATTCTCTTTTAGAGTTTTTGAAATATGAACCTTTACAAATATATTTACCCCTACACCAGTTCTATTGTTTTCCATTCCTTAGTAAGTTATGAAATTTTGTAGTTTTAAGGGTGGTGATTACTGGCTGTTTTATTCATTTACAGTTCTCAAGAACAGGCGAAGTTCTTGTGGTGAGACCACTAATTCCATTATGCTCCATGCTCTTGAAGAGATAATTCCTTCTTTTGCAAACAGGTACTTCTGAGTCTGCTGCAGGTCTCTTATTACTTCTACACATTATCTAGTGTTATTTATTTTGACATGGAAGATAAAATATCATGAGCAGGGAAGCTGCTCGACTCAGAGAAGCTTATTTTTAAACTAATCTTCTACTTATGACCAAAAATATATAGATTGTCTACTCTACAGGTCCAATGACCAAACAGTTATTGTAGTCTAATCCTGTGGCCAAACCTCAAATTTCTTTGTGCTAATCGTTTTTTTTCTTTATATATATCCGTCAATAAAGGATTATAGAATGTTCCAGAACTTTAAAATTGCCTCTCTCGCCCTAAAAGAAATAAAGGAAGTTTTCCAAATTGCAGAACTATGACCAATTAGCAAAATATGACCTTTTCAGCTTGGTTCATATAATTGATGTTATGGCAGGATAAGTTCAAGTTATTATTGGTAAATGAACTTAAGCGGTAGGCAAACTTCAGTGTGAATTGGTGGTGTGACAGAGTATAGATGGTATGAGAATAAGTGTACAATAGATGTTTATCCATTTAATCTCTGAATTGAACTTCAGTAAACATGATTAAGAATCATCTTTAGTTTCGGCACCAGGAGAAAGAACTTTGCCTCTATGCTTGCTATACCTAGTTTTTCAGTCTCCATTAGTAGCTTTGAATCGTGACACAGCTGTATTTTTTAGTCTTATCAAGTTATAACATGCTATGTGCACTCCCCTGTCTAGTGAAAGTAAAAGCCAATATGTCATATTATAGTGCAGACCAAGTATTTTTACGTTTAAGAAGGTGATCTCACTCAATTTGTCCGAGTTTACTAATCCCGTCTGCCTGTGGTTTAGTAAAAGGAGGGATTTTCTTTTTGCATTATGAACGAAAAAGAGTAACTGAAATCACCTTATAGATTTCTGTGTTATTGCATGTACTCGTTATTGTTTCTAATGCATAGTTGTCTGCTGGACATGCAGTAGTAAAGAACAACTGAAGGAGTTGTTGGATGTGGAGTAGCCTCTGAAGCCTCGAGGCATTGATTGGAGCATAGCTCAAGATCTCAATTACGTAGAGGCTTTGCTAGATTTTGTTGGTGACGATATCTAGCAAGGACAACGGTTTC</genome_strand>
        <mrna_strand>CATCTTTCTGATCTTCCTCAGAATTGCAAGTCAGATCCTAATATCTCATACAGCCAAGCAGAAAGTGTCGGCGAGATAAACCAAAGTGATTTTCAGTCACCAATCACTGCTAGTCGAGATGATGGTTTATCCTCTCTGGTTTCATCCAAACACAAGTTGAGCGTCAAGATTGAGTCAATGTATACCGATGGAGTAGATTCAATTTATTCCAATTGGTTTGACAATTCCTCATCATTCTTAGAATCAAAAGCTTCTGAAGTCACAAAGAGTATGAGTGGTAAAGATATCCATTTAAGAAACATAGGCCATCAAGAAGGAAGGGATTCATGCTCATCTTTTTCAACCAGAGATCAAAATAGTTTTGCTACACATTTCTCACCTAATGAAGTATCAGGCAGGAATAATATGGAGGAAAAAGTAACTGTCGGGGACTTGGGATGTACACCACCAAAATTTACATCGTCGAAGTGTTCAGAAGAAAAAAGCGTATCACTTCACAGGCAAAACTTGAGTAGAAATCAGTATCTTCTTATCCAGGAAGGTTCTGATGAAACAAGTGTGGTTGCTTATAGTCTTGTCGGCTGTATTTTAAATAAGTTCGCTCAGATGGATGGGTTACAGTTATCTGAGGACAATGTATCATATCTCCAAGGCAACACTTCAGATCCCAAAATTTTTGAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTCAAGAACAGGCGAAGTTCTTGTGGTGAGACCACTAATTCCATTATGCTCCATGCTCTTGAAGAGATAATTCCTTCTTTTGCAAACAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGTAAAGAACAACTGAAGGAGTTGTTGGATGTGGAGTAGCCTCTGAAGCCTCGAGGCATTGATTGGAGCATAGCTCAAGATCTCAATTACGTAGAGGCTTTGCTAGATTTTGTTGGTGACGATATCTAGCAAGGACAACGGTTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0117B06-OI86t/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U331958" ref_strand="+" ref_description="SGN-U331958        Tomato 200607 #1 [2 ESTs aligned] arabidopsis/peptide: | Symbol: None | similar to hypothetical protein [Arabidopsis thaliana] (TAIR:At5g07170.1); similar to B1158C05.16 [Oryza sativa (japonica cultivar-group)] (GB:NP_917835.1) | chr5:16248482-16251536 REVERSE | Aliases: MNF13.3, MNF13_3(evalue: 6e-14, score=73.9) genbank/nr: IMP(evalue: 3e-16, score=87.8)">
      <seq>gcatttggagtgcataagggtgaaacgacataccatggtggaccagcaacattgttctttgattcaactgagaatttgagaggcgtatattccatgcttgataagatgaacaacaaggggttatgctgtattgctgagactgtaactggatgctcgatttcttttgagaaaaccaattggcaaatgaaaaggataatcaagcagtttcttcccaaaattctccataagcatgatgattccagtcaaagtcgaattaaaaaaatttctcaactcctcaaagatcctcaaaactttcgtgttaatcacggggcttcttgttctacctcagaatcctttcgcagttctgctatttatgttctggatagacttgaagagttgtctcttcttactttgagtaaaatgcataggaatctgagggatgtcacaggttacatccctttactgcagcctcctcgaatatgttggagtattggaagtttagttgaacaaatcaggaggacttcgttaaaaatgttatcggactacgaagaaggggatgaaccaccagaacccctggctaaggctttgtccgtagcagccttaatgctaaaaccagaacttgattattgtctctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0117B06-OI86t/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0117B06.1" temp_strand="-" temp_description="C06HBa0117B06.1  AC211048.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0117B06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="124492" stop="123279"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="124192" g_stop="123579" g_length="614"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="614" r_length="614" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0117B06.1" gen_strand="-" ref_id="SGN-U331958" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>614</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0117B06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U331958" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="124192" e_stop="123579"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCATTTGGAGTGCATAAGGGTGAAACGACATACCATGGTGGACCAGCAACATTGTTCTTTGATTCAACTGAGAATTTGAGAGGCGTATATTCCATGCTTGATAAGATGAACAACAAGGGGTTATGCTGTATTGCTGAGACTGTAACTGGATGCTCGATTTCTTTTGAGAAAACCAATTGGCAAATGAAAAGGATAATCAAGCAGTTTCTTCCCAAAATTCTCCATAAGCATGATGATTCCAGTCAAAGTCGAATTAAAAAAATTTCTCAACTCCTCAAAGATCCTCAAAACTTTCGTGTTAATCACGGGGCTTCTTGTTCTACCTCAGAATCCTTTCGCAGTTCTGCTATTTATGTTCTGGATAGACTTGAAGAGTTGTCTCTTCTTACTTTGAGTAAAATGCATAGGAATCTGAGGGATGTCACAGGTTACATCCCTTTACTGCAGCCTCCTCGAATATGTTGGAGTATTGGAAGTTTAGTTGAACAAATCAGGAGGACTTCGTTAAAAATGTTATCGGACTACGAAGAAGGGGATGAACCACCAGAACCCCTGGCTAAGGCTTTGTCCGTAGCAGCCTTAATGCTAAAACCAGAACTTGATTATTGTCTCTC</genome_strand>
        <mrna_strand>GCATTTGGAGTGCATAAGGGTGAAACGACATACCATGGTGGACCAGCAACATTGTTCTTTGATTCAACTGAGAATTTGAGAGGCGTATATTCCATGCTTGATAAGATGAACAACAAGGGGTTATGCTGTATTGCTGAGACTGTAACTGGATGCTCGATTTCTTTTGAGAAAACCAATTGGCAAATGAAAAGGATAATCAAGCAGTTTCTTCCCAAAATTCTCCATAAGCATGATGATTCCAGTCAAAGTCGAATTAAAAAAATTTCTCAACTCCTCAAAGATCCTCAAAACTTTCGTGTTAATCACGGGGCTTCTTGTTCTACCTCAGAATCCTTTCGCAGTTCTGCTATTTATGTTCTGGATAGACTTGAAGAGTTGTCTCTTCTTACTTTGAGTAAAATGCATAGGAATCTGAGGGATGTCACAGGTTACATCCCTTTACTGCAGCCTCCTCGAATATGTTGGAGTATTGGAAGTTTAGTTGAACAAATCAGGAGGACTTCGTTAAAAATGTTATCGGACTACGAAGAAGGGGATGAACCACCAGAACCCCTGGCTAAGGCTTTGTCCGTAGCAGCCTTAATGCTAAAACCAGAACTTGATTATTGTCTCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0117B06-OI86t/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U322751" ref_strand="+" ref_description="SGN-U322751        Tomato 200607 #1 [6 ESTs aligned] arabidopsis/peptide: AT5G24530.1 | Symbol: None | oxidoreductase, 2OG-Fe(II) oxygenase family protein, similar to flavanone 3-hydroxylase (Persea americana)(GI:727410); contains PF03171 2OG-Fe(II) oxygenase superfamily domain | chr5:8378836-8383404 FORWARD | Aliases: K18P6.6, K18P6_6 (evalue: 3e-139, score=491) genbank/nr: 2OG-Fe(II)(evalue: 5e-146, score=520)">
      <seq>tgaacccattaattaacattatcgtcatttggttcacgtgaaaaaaaccaagcccacaatatctaaaatatgtatatatattagctactttaagcttcaatgacattttagttcttgtatcacatctctatttttgtgttctaaaacataatgacaacaacaagtgttctttctagtggattcaaccactcaaccctccctcagtcttacgttcgacctgaatctcaaagaccttgcatgtctgaagttgttgatagcgacgatcttgtcccagtcattgatatgtcttgtactaataggaacgttatcgttcatcaaatcggtgaagcttgtcgtctttatgggtttttccaggtgataaatcacggtgtgtcgaagaaggtgatagatgaaatgttaggggtaagtcatgaattttttaagctaccagttgaagaaaagatgaaattgtattctgatgatccatctaagactatgagattatcaactagttttaatgttaagaaggaaactgttcataattggagagattatcttaggctacattgttatcctttggacaaatatgcccctgaatggccttctaatcctccttctttcagggaaatagtaagcaaatattgcatggaagttagagagcttggatatagattggaagaagcaatatcagagagcttagggcttgagaaggattgtataaaaaatgtgttaggtgaacaaggacaacatatggctatcaatttttatcctcagtgtccacaacctgaattaacttatgggttaccagcccatacagatccaaatgcaattacaattcttcttcaagatttgcaagtggctggccttcaagttcttaaggatggaaaatggttatctattaaacctcagcctaatgcctttgtcatcaatcttggtgatcaattggaggcgttgagtaatgggaagtataaaagtatatggcatagagctattgtaaattcagacaaagcaaggatgtctgtggcttcttttctctgtcccaatgattgttccattatcagtgctccaaaaaccttaactgaagatggatcttctgcaatttatcgacatttcacttatgctgaatattatgaaaaattctggagcaggaatttagatcaggaatattgtttagaactttttaagaacgatggaacctagtacttgtatgagtttattacttttgtatcgacctaagtgtggttgtcacacaattatgttaggaaacaatcacttgatatagttcagatatgaaactcgcaaaaaaaatgatacttcaagtatgtaaaactttttttgttctttttctctggcattatcatctgttgcacccctgttttatatgtggaatcaaattgggaaagatgaaattgcattggctgataaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0117B06-OI86t/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0117B06.1" temp_strand="-" temp_description="C06HBa0117B06.1  AC211048.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0117B06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="137520" stop="133960"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="137217" g_stop="136868" g_length="350"/>
          <reference_exon_boundary r_type="cDNA" r_start="10" r_stop="354" r_length="345" r_score="0.966"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="136867" i_stop="136732" i_length="136">
            <donor d_prob="0.968" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="136731" g_stop="136484" g_length="248"/>
          <reference_exon_boundary r_type="cDNA" r_start="355" r_stop="602" r_length="248" r_score="0.992"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="136483" i_stop="135137" i_length="1347">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.911" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="135136" g_stop="134812" g_length="325"/>
          <reference_exon_boundary r_type="cDNA" r_start="603" r_stop="927" r_length="325" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="134811" i_stop="134683" i_length="129">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="134682" g_stop="134265" g_length="418"/>
          <reference_exon_boundary r_type="cDNA" r_start="928" r_stop="1342" r_length="415" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="1401" polyA_stop="1419"/>
      <MATCH_line gen_id="C06HBa0117B06.1" gen_strand="-" ref_id="SGN-U322751" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>1341</cumulative_length_of_scored_exons>
        <coverage percentage="0.945" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0117B06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U322751" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="137217" e_stop="136868"/>
          <exon e_start="136731" e_stop="136484"/>
          <exon e_start="135136" e_stop="134812"/>
          <exon e_start="134682" e_stop="134265"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAATTAACATTATCGTGATTTGGTTCACGTGAAAAAAACCAAGCCCACAATATCTAAAATATGTATATATATATTAGCTACTTTAAGCTTCAATGACATTTTAGTTCTTGTATTATTACATCTCTATTTTTGTGTTCTTAAACATGATGACAACAACAAGTGTTCTTTCTAGTGGATTCAACCACTCAACCCTCCCTCAATCTTACGTTCGACCTGAATCTCAAAGACCTTGCATGTCTGAAGTTGTTGATAGCGACGATCTTGTCCCAGTCATTGATATGTCTTGTACTGATAGGAACGTTATCGTTCATCAAATCGGTGAAGCTTGTCGTCTTTATGGGTTTTTTCAGGTTCTTTTTTCGTACATTCAATCCTTTCAGATGTGTTGTTATTCTCGTTTCAATTCATATAGCAACATTAGTGTTTTTTAATCACATTTTTTTTTCAAATGTTTAACTAGTAGTTATTTTGGATTTTTTTTATCAGGTGATAAATCACGGTGTGTCGAAGAAGGCGATGGATGAAATGTTAGGGGTAAGTCATGAATTTTTTAAGCTACCAGTTGAAGAAAAGATGAAATTGTATTCTGATGATCCATCTAAGACTATGAGATTATCAACTAGTTTTAATGTTAAGAAGGAAACTGTTCATAATTGGAGAGATTATCTTAGGCTACATTGTTATCCTTTGGACAAATATGCCCCTGAATGGCCTTCTAATCCTCCTTCTTTCAGGTAATTAATTAAATTTTTCATTATAATTAAGTATTATTAGTTCATTCATTTCTTGTTTATTTTGTTAATCCAAATTCATTTTCTATAAAATGATGACTCTATATGAAACGTGTTTATCCCGTATCTAAGTTGTTTTTTGCAAATTTTTTAGTCATATTACTAACTTGTCTATTTTTTGCTTTGTCACGTGGATATGTGTTATGTGTAATATTTTTTTTTGTCGTGTTTCTAAGTAGTCGTAATTTTAATTGTCACGTATCTAAACTGTTTAGTAGTAATCTAGGTAAATTATTTGTAATTACGCGTTTAAGTTGTTTCTGTTTAGTCAGTGTTTGTACCTGTAATTACTAATTAGGTGCGCTAATTAATTAGATTATGACAAATTTTATGTTGCTTCACAAAGAAATTAAATGACTCAAGTCTATACAATATCTTTTTTCAATTATTCATAATGGTGATGACGATTTCAATTATAAACGCCTCAGCCAACTTTTTTAAAAAAGAAATCATATACTTTCGATCAATTAATTTGTTAATATAATTAAATATATACCATATGTTTGTGAATTAAATGTATATTTAGTAAAAGATATATAAATGTATTTTGTTAAACTAGTTAATTAAAATATTTAAGGCGGTACCAGATGTTTTATGGAGTATATTATTCCAAATCTCCATGATTTTAATTTGTTTATCTCGTAAGAATAAAAATAATTCTAAAAAGTATTATTTTACTCAAGTCCTTTTCAATTATCGGTGCATCAATATCTGTGTGTCTAGTCCCTAGAGTTCAGCTGTTAATTTTATTATATTTCATGACGTCATGGCAGACATCGGCTGATGACGCAATATTTTTCGACTTTTTCTTGTTCGCTATATTAAATATTTTTATTTATTTGTTTATATATTAATAAAAATCATTTCAAATTATATTAATAAAAATGAAAGACGCGTCGATATAACCATGTGATGGTGATAGTCAGCATAAGATAAAATCATGTGATGAATAATTGATTTTCTTTGTCAGGTGCAACTCCCTAGCAGACAACTACTTTATGGAGTCTGATTTTTATTTTATTTTTCAGTTTTTTAAAAAAAACAAAAACGGTATCCTTGAAAATATTTTTATTCAAGTTAAAACTCTTTTCTTAAAAATTAAAACGATATTAGTATTACTTTTCTAGAATTGGGAACCAAAATGATTGTGTTTGTACGTCTTTCTACCTATATATACGACATATTATGACGTATGAGTTTAATTAATGTTCTCACCATTCATTTTTTTTAAGTCGATCGATTAAATCGAAATAGAAATCTAATTATTGCTCTTTGAATTATATTGTTTAGGGAAATAGTAAGCAAATATTGCATGGAAGTTAGAGAGCTTGGATATAGATTGGAAGAAGCAATATCAGAGAGCTTAGGGCTTGAGAAGGATTGTATAAAAAATGTGTTAGGTGAACAAGGACAACATATGGCTATCAATTTTTATCCTCAGTGTCCACAACCTGAATTAACTTATGGGTTACCAGCCCATACAGATCCAAATGCAATTACAATTCTTCTTCAAGATTTGCAAGTGGCTGGCCTTCAAGTTCTTAAGGATGGAAAATGGTTATCTATTAAACCTCAGCCTAATGCCTTTGTCATCAATCTTGGTGATCAATTGGAGGTAAACACGTCTTTCTCTGTTTCTGTTTCAATTTATGTGATATCAGACTTGCACATCGTCTGAAAATACAACTAATTAGATAAAAGAGTATAAACTTTTAGATGAAATAATTATTTATCGTGTGTGCAGGCGTTGAGTAATGGGAAGTATAAAAGTATATGGCATAGAGCTATTGTAAATTCAGACAAAGCAAGGATGTCTGTGGCTTCTTTTCTCTGTCCCAATGATTGTTCCATTATCAGTGCTCCAAAAACCTTAACTGAAGATGGATCTTCTGCAATTTATCGAGATTTCACTTATGCTGAATATTATGAAAAATTCTGGAGCAGGAATTTAGATCAGGAATATTGTTTAGAACTTTTTAAGAACGATGGAACCTAGTACTTGTATGAGTTTATTACTTTTGTATCGACCTAAGTGTGGTTGTCACACAATTATGTTAGGAAACAATCACTTGATATAGTTCAGATATGAAATTCGCAAAAAAAAAAATGATACTTCAAGTATGTAAAACTTTTTTTGTTCTTTTTCTCTGGCATTATCATCT</genome_strand>
        <mrna_strand>TAATTAACATTATCGTCATTTGGTTCACGTGAAAAAAACCAAGCCCACAATATCTAAAATATG--TATATATATTAGCTACTTTAAGCTTCAATGACATTTTAGTTCTTG---TATCACATCTCTATTTTTGTGTTCTAAAACATAATGACAACAACAAGTGTTCTTTCTAGTGGATTCAACCACTCAACCCTCCCTCAGTCTTACGTTCGACCTGAATCTCAAAGACCTTGCATGTCTGAAGTTGTTGATAGCGACGATCTTGTCCCAGTCATTGATATGTCTTGTACTAATAGGAACGTTATCGTTCATCAAATCGGTGAAGCTTGTCGTCTTTATGGGTTTTTCCAG........................................................................................................................................GTGATAAATCACGGTGTGTCGAAGAAGGTGATAGATGAAATGTTAGGGGTAAGTCATGAATTTTTTAAGCTACCAGTTGAAGAAAAGATGAAATTGTATTCTGATGATCCATCTAAGACTATGAGATTATCAACTAGTTTTAATGTTAAGAAGGAAACTGTTCATAATTGGAGAGATTATCTTAGGCTACATTGTTATCCTTTGGACAAATATGCCCCTGAATGGCCTTCTAATCCTCCTTCTTTCAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAAATAGTAAGCAAATATTGCATGGAAGTTAGAGAGCTTGGATATAGATTGGAAGAAGCAATATCAGAGAGCTTAGGGCTTGAGAAGGATTGTATAAAAAATGTGTTAGGTGAACAAGGACAACATATGGCTATCAATTTTTATCCTCAGTGTCCACAACCTGAATTAACTTATGGGTTACCAGCCCATACAGATCCAAATGCAATTACAATTCTTCTTCAAGATTTGCAAGTGGCTGGCCTTCAAGTTCTTAAGGATGGAAAATGGTTATCTATTAAACCTCAGCCTAATGCCTTTGTCATCAATCTTGGTGATCAATTGGAG.................................................................................................................................GCGTTGAGTAATGGGAAGTATAAAAGTATATGGCATAGAGCTATTGTAAATTCAGACAAAGCAAGGATGTCTGTGGCTTCTTTTCTCTGTCCCAATGATTGTTCCATTATCAGTGCTCCAAAAACCTTAACTGAAGATGGATCTTCTGCAATTTATCGACATTTCACTTATGCTGAATATTATGAAAAATTCTGGAGCAGGAATTTAGATCAGGAATATTGTTTAGAACTTTTTAAGAACGATGGAACCTAGTACTTGTATGAGTTTATTACTTTTGTATCGACCTAAGTGTGGTTGTCACACAATTATGTTAGGAAACAATCACTTGATATAGTTCAGATATGAAACTCGC---AAAAAAAATGATACTTCAAGTATGTAAAACTTTTTTTGTTCTTTTTCTCTGGCATTATCATCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0117B06-OI86t/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U337680" ref_strand="+" ref_description="SGN-U337680        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: AT5G24530.1 | Symbol: None | oxidoreductase, 2OG-Fe(II) oxygenase family protein, similar to flavanone 3-hydroxylase (Persea americana)(GI:727410); contains PF03171 2OG-Fe(II) oxygenase superfamily domain | chr5:8378836-8383404 FORWARD | Aliases: K18P6.6, K18P6_6 (evalue: 2e-61, score=232) genbank/nr: 2OG-Fe(II)(evalue: 2e-63, score=245)">
      <seq>tgacgtatgagtttaattaatgttctcaccattcattttttttaagtcgatcgattaaatcgaaatagaaatctaattattgctctttgaattatattgtttagggaaatagtaagcaaatattgcatggaagttagagagcttggatatagattggaagaagcaatatcagagagcttagggcttgagaaggattgtataaaaaatgtgttaggtgaacaaggacaacatatggctatcaatttttatcctcagtgtccacaacctgaattaacttatgggttaccagcccatacagatccaaatgcaattacaattcttcttcaagatttgcaagtggctggccttcaagttcttaaggatggaaaatggttatctattaaacctcagcctaatgcctttgtcatcaatcttggtgatcaattggaggtaaacacgtctttctctgtttctgtttcaatttatgtgatatcagacttgcacatcgtctgaaaatacaactaattagataaaagagtataaacttttagatgaaataattatttatcgtgtgtgcaggcgttgagtaatgggaagtataaaagtatatggcatagagctattgtaaattcagacnaagcaaggatgtctgtggcttcttttctctgtcccaatgattgttccattatcagtgctccaaaaacccttactgaagatggatcttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0117B06-OI86t/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0117B06.1" temp_strand="-" temp_description="C06HBa0117B06.1  AC211048.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0117B06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="135540" stop="134237"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="135240" g_stop="134537" g_length="704"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="704" r_length="704" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0117B06.1" gen_strand="-" ref_id="SGN-U337680" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>704</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0117B06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U337680" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="135240" e_stop="134537"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGACGTATGAGTTTAATTAATGTTCTCACCATTCATTTTTTTTAAGTCGATCGATTAAATCGAAATAGAAATCTAATTATTGCTCTTTGAATTATATTGTTTAGGGAAATAGTAAGCAAATATTGCATGGAAGTTAGAGAGCTTGGATATAGATTGGAAGAAGCAATATCAGAGAGCTTAGGGCTTGAGAAGGATTGTATAAAAAATGTGTTAGGTGAACAAGGACAACATATGGCTATCAATTTTTATCCTCAGTGTCCACAACCTGAATTAACTTATGGGTTACCAGCCCATACAGATCCAAATGCAATTACAATTCTTCTTCAAGATTTGCAAGTGGCTGGCCTTCAAGTTCTTAAGGATGGAAAATGGTTATCTATTAAACCTCAGCCTAATGCCTTTGTCATCAATCTTGGTGATCAATTGGAGGTAAACACGTCTTTCTCTGTTTCTGTTTCAATTTATGTGATATCAGACTTGCACATCGTCTGAAAATACAACTAATTAGATAAAAGAGTATAAACTTTTAGATGAAATAATTATTTATCGTGTGTGCAGGCGTTGAGTAATGGGAAGTATAAAAGTATATGGCATAGAGCTATTGTAAATTCAGACAAAGCAAGGATGTCTGTGGCTTCTTTTCTCTGTCCCAATGATTGTTCCATTATCAGTGCTCCAAAAACCTTAACTGAAGATGGATCTTC</genome_strand>
        <mrna_strand>TGACGTATGAGTTTAATTAATGTTCTCACCATTCATTTTTTTTAAGTCGATCGATTAAATCGAAATAGAAATCTAATTATTGCTCTTTGAATTATATTGTTTAGGGAAATAGTAAGCAAATATTGCATGGAAGTTAGAGAGCTTGGATATAGATTGGAAGAAGCAATATCAGAGAGCTTAGGGCTTGAGAAGGATTGTATAAAAAATGTGTTAGGTGAACAAGGACAACATATGGCTATCAATTTTTATCCTCAGTGTCCACAACCTGAATTAACTTATGGGTTACCAGCCCATACAGATCCAAATGCAATTACAATTCTTCTTCAAGATTTGCAAGTGGCTGGCCTTCAAGTTCTTAAGGATGGAAAATGGTTATCTATTAAACCTCAGCCTAATGCCTTTGTCATCAATCTTGGTGATCAATTGGAGGTAAACACGTCTTTCTCTGTTTCTGTTTCAATTTATGTGATATCAGACTTGCACATCGTCTGAAAATACAACTAATTAGATAAAAGAGTATAAACTTTTAGATGAAATAATTATTTATCGTGTGTGCAGGCGTTGAGTAATGGGAAGTATAAAAGTATATGGCATAGAGCTATTGTAAATTCAGACNAAGCAAGGATGTCTGTGGCTTCTTTTCTCTGTCCCAATGATTGTTCCATTATCAGTGCTCCAAAAACCCTTACTGAAGATGGATCTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0117B06-OI86t/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U332756" ref_strand="+" ref_description="SGN-U332756        Tomato 200607 #1 [2 ESTs aligned]">
      <seq>cccaccccaacccctatccccatacaccagtggttatcttcttccccatcattctaatgatttcaaaattcttagtatcagtggttatcttcttcccccaccattctaatggtttcaaaattcttagcattttgtttcatttataaatttttcgaagagattcttttccccatctttctctacctaaaaaacgagatgaagtaaaaagttataattaataaaagctgatgaaaaaaaaatttgtagggttaaagatagaactgtacagggagggggggtcgccattaatggagttaaagaaaatgtatgttttgttccagttgaaggcagggaggtgtttaggttttactttttttttaaattttttttactttaaaataatttttattttttttactttataatataatgtttaaataattttttggattaaaaaataacacatgtcattatttgattggtcaaattgacatgtcagcgcgagtgtatttcacacattctctattttttgtttattctcgaaaaaatgttcaaatgattcaaattcagaatggttgaagtgttcaataggtagtacgtctagttgaggtgtctaaatgaataatcgggacaagtttgagtggccgcatatgactttggcctattttattctaccgttggttacgaatatttattagtatatataggaatccaccattaanggaatatatatatatatatatatatat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0117B06-OI86t/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0117B06.1" temp_strand="-" temp_description="C06HBa0117B06.1  AC211048.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0117B06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="140770" stop="130139"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="140469" g_stop="139760" g_length="710"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="697" r_length="697" r_score="0.906"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="139759" i_stop="139323" i_length="437">
            <donor d_prob="0.000" d_score="0.58"/>
            <acceptor a_prob="0.978" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="139322" g_stop="139292" g_length="31"/>
          <reference_exon_boundary r_type="cDNA" r_start="698" r_stop="728" r_length="31" r_score="0.548"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0117B06.1" gen_strand="-" ref_id="SGN-U332756" ref_strand="+">
        <total_alignment_score>0.906</total_alignment_score>
        <cumulative_length_of_scored_exons>741</cumulative_length_of_scored_exons>
        <coverage percentage="1.018" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0117B06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U332756" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="140469" e_stop="139760"/>
          <exon e_start="139322" e_stop="139292"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCACCCCAACCCCCATACCCATACACCAGTGGTTATCTTCTTCCCCCATCATTCTAATGATTTCAAAATTCTTAGTATCAGTGGTTATCTTCTTCCCCCACCATTCTAATGGTTTCAAAATTCTTAGTGTTTTGTTTCATTTAT-AATTTTTCGAATAGATTCTTTTCCCCATTTTTCTCTACCTAAAAAACGAGATGAAGTAAAAAGTTATAATTAATAAAAAAGCTGATG-AAAAAAAA-TTGTCGGATTAAAGATGGAACTGTACAGGGAAGGGGGGGGCGCCATTAATGGAGTTAGAGGAAATGTAAGTTTTGTTCCAGTTGAAGGCAGGAAAGTGGGTGTTTAGGTTTTACTTTTTTTTTTCATTTGTTTTACTTTAAAATAATTTTTATTTTTTTTTACTTTATAATATAATGTTTAAATAATTTTTTGGATTAAAAAATAACACATGTCATTATTTGATTGGTCAAATTGACATGTCAGCGCGAGTGTATTTCACACATTCTCTATTTTTTGTTTATTCTCGAAAAAATGTTCAAATGGTTCAAATTCAAAATGGTTGAAGTGTTCAATAGATAGTACGTCTAGTTAAGGTGTCTAAATGAATAATTGGGACAAATTTAAGTGACCGCATATGATTTTGGCCTACTATTTTTATACGCACTACGTATAATATAATTTTATGACGAATAATATAATATTCAACTAGGTGTACGATGACATTGAAAAGTGGAAGCCACCAAATATATAAATAAAATCTCGTCCTTTAATTATTGTTCGTTATATCGATGGAAAATATCTTTGTTTAACCCTACATGTATGAAAAGATCTCTAGCACTGATTCAACAGTGAACTTTTTTCTTTTACCAAAATTAAAATTGGATTTCCTAGGTCACTCATATCCTCTTCTTTGGATATGCAAACAAACATGTCTACATTGACCAAGTTAAAATTTCAAATTCAATTTTTAAAATTTAATAAAATTTGAATTTATATAACAATTAATATATATTCAATAGACAAAAATAAATATAACTTTACACTAAAATTATTAAGTTGGAACGAGTGGATAATTCTAACTCCGTTCCTGTCTCTATCTACTTAATAATTAATTATAGTTCTAGAAAACGTGTTATTGATATGCAGTACTAGAGAATAGAAAGAAACATAGTCATAA</genome_strand>
        <mrna_strand>CCCACCCCAACCCCTATCCCCATACACCAGTGGTTATCTTCTT-CCCCATCATTCTAATGATTTCAAAATTCTTAGTATCAGTGGTTATCTTCTTCCCCCACCATTCTAATGGTTTCAAAATTCTTAGCATTTTGTTTCATTTATAAATTTTTCGAAGAGATTCTTTTCCCCATCTTTCTCTACCTAAAAAACGAGATGAAGTAAAAAGTTATAATTAAT--AAAAGCTGATGAAAAAAAAATTTGTAGGGTTAAAGATAGAACTGTACAGGG-AGGGGGGGTCGCCATTAATGGAGTTAAAGAAAATGTATGTTTTGTTCCAGTTGAAGGCAGG---G-AGGTGTTTAGGTTTTACTTTTTTTTTAAATTTTTTTTACTTTAAAATAATTTTTA-TTTTTTTTACTTTATAATATAATGTTTAAATAATTTTTTGGATTAAAAAATAACACATGTCATTATTTGATTGGTCAAATTGACATGTCAGCGCGAGTGTATTTCACACATTCTCTATTTTTTGTTTATTCTCGAAAAAATGTTCAAATGATTCAAATTCAGAATGGTTGAAGTGTTCAATAGGTAGTACGTCTAGTTGAGGTGTCTAAATGAATAATCGGGACAAGTTTGAGTGGCCGCATATGACTTTGGCCTA-TTTTATTCTAC-C-GTTGGT-TACGA-ATATTTATTA-GTAT-ATATAGGAATCCACCAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................TAANGGAATATATATATATATATATATATAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0117B06-OI86t/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U335847" ref_strand="+" ref_description="SGN-U335847        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: | Symbol: None | 30S ribosomal protein, putative, similar to SP:P19954 Plastid-specific 30S ribosomal protein 1, chloroplast precursor (CS-S5) (CS5) (S22) (Ribosomal protein 1) (PSRP-1) {Spinacia oleracea}; contains Pfam profile PF02482: Sigma 54 modulation protein / S30EA ribosomal protein | chr5:8365624-8367429 FORWARD | Aliases: T31K7.7, T31K7_7(evalue: 8e-06, score=48.5) genbank/nr: chloroplast-specific(evalue: 1e-21, score=107)">
      <seq>cttcttcttgtcccgctactgcttctccagctttgtcactgacattgtcatctaccaattcacgatttttaaattcagctttcaagatgaatgaaattaatgttcctgtcaggaatagggtgacaaaatcctttggggtccggatgtcttgggatggtccactttcttctgttaaactcattcttcaagggaaaaatcttgaggtcacactccttaggccttacaatattattatttccctgcattttttgcttatatctgctaaagtgtacttcataggaacttgggttttctgaaaaatagttaattgattttgaatatactcctctatcaaatgactgctcaggtgctataaggtctatcagaaacaacctgtgtgtcctgaaaaagtaggactaagatctgcgtacttaatagtaccttttagcatcttatgtctctgtatcaaaatctaattttgatgggatctaccatttcagtgaaaaatagggcacaatgaaagaaaaatctgttaatgtgatagcaattagttggatttatagtttagtcatgttctgtgtttctattggttctctaatttgtcagagaagaaaatatagagagcttctagtatctttattactcattgagtcatttctaattttgttttgcttaatgttagtttgagatgatcttaaatgaagggacatggtcaatgaggattcatatagctgagcaaacttattgcgattgtgttgtagctgttgtagaaaaaatacgtatgaattgacatcaaaaaaattagcttgttggactttaaccatttcaatagctagttcacaatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0117B06-OI86t/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0117B06.1" temp_strand="+" temp_description="C06HBa0117B06.1  AC211048.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0117B06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="143947" stop="145370"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="144247" g_stop="145070" g_length="824"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="824" r_length="824" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0117B06.1" gen_strand="+" ref_id="SGN-U335847" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>824</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0117B06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U335847" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="144247" e_stop="145070"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTCTTCTTGTCCCGCTACTGCTTCTCCAGCTTTGTCACTGACATTGTCATCTACCAATTCACGATTTTTAAATTCAGCTTTCAAGATGAATGAAATTAATGTTCCTGTCAGGAATAGGGTGACAAAATCCTTTGGGGTCCGGATGTCTTGGGATGGTCCACTTTCTTCTGTTAAACTCATTCTTCAAGGGAAAAATCTTGAGGTCACACTCCTTAGGCCTTACAATATTATTATTTCCCTGCATTTTTTGCTTATATCTGCTAAAGTGTACTTCATAGGAACTTGGGTTTTCTGAAAAATAGTTAATTGATTTTGAATATACTCCTCTATCAAATGACTGCTCAGGTGCTATAAGGTCTATCAGAAACAACCTGTGTGTCCTGAAAAAGTAGGACTAAGATCTGCGTACTTAATAGTACCTTTTAGCATCTTATGTCTCTGTATCAAAATCTAATTTTGATGGGATCTACCATTTCAGTGAAAAATAGGGCACAATGAAAGAAAAATCTGTTAATGTGATAGCAATTAGTTGGATTTATAGTTTAGTCATGTTCTGTGTTTCTATTGGTTCTCTAATTTGTCAGAGAAGAAAATATAGAGAGCTTCTAGTATCTTTATTACTCATTGAGTCATTTCTAATTTTGTTTTGCTTAATGTTAGTTTGAGATGATCTTAAATGAAGGGACATGGTCAATGAGGATTCATATAGCTGAGCAAACTTATTGCGATTGTGTTGTAGCTGTTGTAGAAAAAATACGTATGAATTGACATCAAAAAAATTAGCTTGTTGGACTTTAACCATTTCAATAGCTAGTTCACAATG</genome_strand>
        <mrna_strand>CTTCTTCTTGTCCCGCTACTGCTTCTCCAGCTTTGTCACTGACATTGTCATCTACCAATTCACGATTTTTAAATTCAGCTTTCAAGATGAATGAAATTAATGTTCCTGTCAGGAATAGGGTGACAAAATCCTTTGGGGTCCGGATGTCTTGGGATGGTCCACTTTCTTCTGTTAAACTCATTCTTCAAGGGAAAAATCTTGAGGTCACACTCCTTAGGCCTTACAATATTATTATTTCCCTGCATTTTTTGCTTATATCTGCTAAAGTGTACTTCATAGGAACTTGGGTTTTCTGAAAAATAGTTAATTGATTTTGAATATACTCCTCTATCAAATGACTGCTCAGGTGCTATAAGGTCTATCAGAAACAACCTGTGTGTCCTGAAAAAGTAGGACTAAGATCTGCGTACTTAATAGTACCTTTTAGCATCTTATGTCTCTGTATCAAAATCTAATTTTGATGGGATCTACCATTTCAGTGAAAAATAGGGCACAATGAAAGAAAAATCTGTTAATGTGATAGCAATTAGTTGGATTTATAGTTTAGTCATGTTCTGTGTTTCTATTGGTTCTCTAATTTGTCAGAGAAGAAAATATAGAGAGCTTCTAGTATCTTTATTACTCATTGAGTCATTTCTAATTTTGTTTTGCTTAATGTTAGTTTGAGATGATCTTAAATGAAGGGACATGGTCAATGAGGATTCATATAGCTGAGCAAACTTATTGCGATTGTGTTGTAGCTGTTGTAGAAAAAATACGTATGAATTGACATCAAAAAAATTAGCTTGTTGGACTTTAACCATTTCAATAGCTAGTTCACAATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0117B06-OI86t/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U312646" ref_strand="+" ref_description="SGN-U312646        Tomato 200607 #1 [201 ESTs aligned] arabidopsis/peptide: | Symbol: None | expressed protein | chr4:13499016-13501654 REVERSE | Aliases: F10M23.190, F10M23_190(evalue: 3e-180, score=629) genbank/nr: gi|15810139|gb|AAL07213.1| unknown protein [Arabidopsis thaliana](evalue: 9e-179, score=630)">
      <seq>ttgtagccccgttttacatcttccagagactccatttgtatcggttcacatacagtagcaaagcgccattatcttactctaccccattggcaaacccacagccacaattttccaatcctccattatcccttctacaattttctatataaatacccacatctctctgctctactcccttattatcaacaacaaccaccaaatttcttcttttttttcttcgatagtagcaatctatcaacaaaaacagagaccccatcacaagaatcttggaattttagtgttgggtttaagaggaaaaggggttattgtattttgcagttttgagggtaaagcccagtttaacaagttgtagacatcacggctatacacaaagtaaaccgccgaccacttttacatgttccagcagtacgtcgtaagggttgtgtaacagctactaaccctgcgccgcacggtggacgtggcgctttgccttctgaaggtggtagtccttccgacctcctcttccttgccggcggcggttctttcctctccttctcctactagatatagttatacttactatagatctctagcttattacgtacagttgtatctagtattctattgattattcgaagaaaacacacaaaaagaagtaaagatgatgctcaaaattaagagggttcctacgcttgtttctaactttcaaaaggatgaggctgatgaaattgctgctcgtggtgctggttgtggccggaattgcctcaggaattgctgccttccaggttcaaagctgccactgtatggtttcaaaaatttgagctacggcaagtctgtcgccgatgaaacaaaggaatctccgatcgactttctggaatcccttgttcttggggaatgggaggatcgtcagcagaaaggcctctttcgctatgatgtcactgcttgcgaaaccaaggtgattcctggagaatatggtttcgttgctcaactgaatgagggaaggcacctcaagaagcggccaactgagtttcgagttgataaggttctgcagccttttgatggaagcaagttcaacttcactaaggttggacaggaagagttgctctttcagtttgaagcaagtgaggaagatgaagtccagctctatccagatgcgccaattgatcctgagaaatctccaagtgtcgttgccataaatgtcagtcccattgagtacggacacgtgcttttgatccctaaggtccttgaatgccttccccagaggattgacagggacagcttcctgcttgcactgcacatggctgccgaagcagcaaacccttacttccgattgggttacaacagcttgggtgcatttgccaccatcaaccatcttcacttccaggcttatttcttggctgtgcaatttcccattgagaaggccccaactcagaagataactgtcactgatgctggagtgaagatatcggagatgctgcattacccagttcgaggtcttgtctttgagggtggaaatactttggaggatttggccgatgttgtctcagattcttgcatttgtctgcaagagaacaacatcccttacaatgtcctaatctctgattcagggaaaaggatattccttctcccacagtgctatgcggagaaacaagcgcttggagaggtcagcgctgaactcctcgacacccaagtcaatcctgctgtttgggagattagtggacacatggtcttgaagaggaaggaggattatgagggtgcaactgaggcaaatgcatggaggcttctcgcagaggtctcactctctgaagcaaggttccaagaagtgactgctctcatctttgaagccattagtctcagtgttgaagagaacgaggacggcactgatggttctcctgaggatctagatgtcacacctccacagcccatggaggagattgatggtctcaacacccacagtaccatggttcccgcctagggttttcacggcccagctctggtgttcatcgcatgttattatttcatgagtttccatctctagctgcccttgtgaaatatcacttaaataaggcaaaaccatgttcaatgtatttgatgaaatctggtctgttcctctgtgaattgaaccttgtgtattattgcttttttctggtataagccatgttctatgtatatgtaatgtggagttggtgtgtgaaatgacccatgtatgctgtttctaattaagacaatactaatataagtttgatttccctaaaaaaaaaaaaaaaaaaaaaaaaaaaaaacttggcccccccccaaaatttacgggatgggatcccaaaaatacccctgggccctaccataagggaggttccgggccaattt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0117B06-OI86t/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0117B06.1" temp_strand="+" temp_description="C06HBa0117B06.1  AC211048.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0117B06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="148612" stop="152687"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="148912" g_stop="149675" g_length="764"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="764" r_length="764" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="149676" i_stop="149767" i_length="92">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="149768" g_stop="149877" g_length="110"/>
          <reference_exon_boundary r_type="cDNA" r_start="765" r_stop="874" r_length="110" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="149878" i_stop="149985" i_length="108">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="149986" g_stop="150045" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="875" r_stop="934" r_length="60" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="150046" i_stop="150756" i_length="711">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="150757" g_stop="150999" g_length="243"/>
          <reference_exon_boundary r_type="cDNA" r_start="935" r_stop="1177" r_length="243" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="151000" i_stop="151089" i_length="90">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="151090" g_stop="151275" g_length="186"/>
          <reference_exon_boundary r_type="cDNA" r_start="1178" r_stop="1363" r_length="186" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="151276" i_stop="151405" i_length="130">
            <donor d_prob="0.952" d_score="1.00"/>
            <acceptor a_prob="0.846" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="151406" g_stop="151654" g_length="249"/>
          <reference_exon_boundary r_type="cDNA" r_start="1364" r_stop="1612" r_length="249" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="151655" i_stop="151767" i_length="113">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="151768" g_stop="152386" g_length="619"/>
          <reference_exon_boundary r_type="cDNA" r_start="1613" r_stop="2231" r_length="619" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0117B06.1" gen_strand="+" ref_id="SGN-U312646" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>2231</cumulative_length_of_scored_exons>
        <coverage percentage="0.952" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0117B06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U312646" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="148912" e_stop="149675"/>
          <exon e_start="149768" e_stop="149877"/>
          <exon e_start="149986" e_stop="150045"/>
          <exon e_start="150757" e_stop="150999"/>
          <exon e_start="151090" e_stop="151275"/>
          <exon e_start="151406" e_stop="151654"/>
          <exon e_start="151768" e_stop="152386"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGTAGCCCCGTTTTACATCTTCCAGAGACTCCATTTGTATCGGTTCACATACAGTAGCAAAGCGCCATTATCTTACTCTACCCCATTGGCAAACCCACAGCCACAATTTTCCAATCCTCCATTATCCCTTCTACAATTTTCTATATAAATACCCACATCTCTCTGCTCTACTCCCTTATTATCAACAACAACCACCAAATTTCTTCTTTTTTTTCTTCGATAGTAGCAATCTATCAACAAAAACAGAGACCCCATCACAAGAATCTTGGAATTTTAGTGTTGGGTTTAAGAGGAAAAGGGGTTATTGTATTTTGCAGTTTTGAGGGTAAAGCCCAGTTTAACAAGTTGTAGACATCACGGCTATACACAAAGTAAACCGCCGACCACTTTTACATGTTCCAGCAGTACGTCGTAAGGGTTGTGTAACAGCTACTAACCCTGCGCCGCACGGTGGACGTGGCGCTTTGCCTTCTGAAGGTGGTAGTCCTTCCGACCTCCTCTTCCTTGCCGGCGGCGGTTCTTTCCTCTCCTTCTCCTACTAGATATAGTTATACTTACTATAGATCTCTAGCTTATTACGTACAGTTGTATCTAGTATTCTATTGATTATTCGAAGAAAACACACAAAAAGAAGTAAAGATGATGCTCAAAATTAAGAGGGTTCCTACGCTTGTTTCTAACTTTCAAAAGGATGAGGCTGATGAAATTGCTGCTCGTGGTGCTGGTTGTGGCCGGAATTGCCTCAGGAATTGCTGCCTTCCAGGTACTGTATACTCCCTTTTCCCAATTGTTTGTTCATCTAAAGCTGATTTAGCAGAATATTGATTTTGTTGTTATGTGTTTGTACTGTTGAAGGTTCAAAGCTGCCACTGTATGGTTTCAAAAATTTGAGCTACGGCAAGTCTGTCGCCGATGAAACAAAGGAATCTCCGATCGACTTTCTGGAATCCCTTGTTCTTGGGGAAGTAAGTGCGAAGCTTCTTATTTTGGTTACTGTTTTGTTATTTTAAAATTGCCAATCTTGAGATATTTTGATTTGATTACTCACTTTTTTGGTCAATTTTGATGTGCAGTGGGAGGATCGTCAGCAGAAAGGCCTCTTTCGCTATGATGTCACTGCTTGCGAAACCAAGGTATTTTTTTCTTCTCTCTTCTGGTTTGTGGTTACTGTATTTGATGCCTACACGTTCTGCTTTAGTTATTACCAGTTAGATAGACTTGGTTTAGAAAGGCTGTCTTGGCAAAATCTATCTAGGGGACTATTAGAAGTTGCAAAAGATAATAATCTCTCCGTCCTTGTTTGACTCAGCACATCCCTTACAAAGTACTTAAAGGGTAAACAGGTATAACAAAATGGAATATTATCTCTTGATTTGTCAAACTGGACAAGTAAAAGTGGACATATTGTTTTTAGTATAGTAGACGAGTAAAACATAGATGGAGGGAAGATTATAATCACAGGAAGTGAATAGGGAAATTTTGAAACGGTATAAGGTCTTATAATTCCGGAAACTAGGGTAATGTCTTTTGGAGGTTAACTTGGTTATTGATTATGATCTGCAAGTGATATATAGCGTTGAACCAATTCTTACCTTAAGAGACTAAGGTTGACGAAGATGTAGTCATTTTATGTCTTACTATTACATAGTAAATTGATGTTATGTAGTGTTTAAATTGAACTAGCGTTTTTTGTCGGTGTGTGGCAAATTTGAAATGAGTGTTGTGCTATTGCTCAGCGCTTGCTTTTCAAGTTGTTGCTTTGGAGACTTACTGATTTTGATTGATGTGAAGAAAGGACACTTCATTTGTGAATCGGCAATTTGATTTAAAATAAATGGTTATAGGTGATTCCTGGAGAATATGGTTTCGTTGCTCAACTGAATGAGGGAAGGCACCTCAAGAAGCGGCCAACTGAGTTTCGAGTTGATAAGGTTCTGCAGCCTTTTGATGGAAGCAAGTTCAACTTCACTAAGGTTGGACAGGAAGAGTTGCTCTTTCAGTTTGAAGCAAGTGAGGAAGATGAAGTCCAGCTCTATCCAGATGCGCCAATTGATCCTGAGAAATCTCCAAGTGTCGTTGCCATAAATGTATGTTCTTAGTTAGTTTTGCACATATACTGGAACCTTTTGGTAAGTAGAGACAGTGATTAATGAGTTTATTGGTTTTCAATGCAACAGGTCAGTCCCATTGAGTACGGACACGTGCTTTTGATCCCTAAGGTCCTTGAATGCCTTCCCCAGAGGATTGACAGGGACAGCTTCCTGCTTGCACTGCACATGGCTGCCGAAGCAGCAAACCCTTACTTCCGATTGGGTTACAACAGCTTGGGTGCATTTGCCACCATCAACCATCTTCACTTCCAGGTAGAGTCCACGACACTTCCCATAATTGACATGGTTTTGGAATTGTCAGTTCTAGTTGTTTGCTCTAGTGCTGACTGCTGAGACCTTAATAAAGAAGAAGGAACTCACTTTCATTGTTTTTGCTCTTCAGGCTTATTTCTTGGCTGTGCAATTTCCCATTGAGAAGGCCCCAACTCAGAAGATAACTGTCACTGATGCTGGAGTGAAGATATCGGAGATGCTGCATTACCCAGTTCGAGGTCTTGTCTTTGAGGGTGGAAATACTTTGGAGGATTTGGCCGATGTTGTCTCAGATTCTTGCATTTGTCTGCAAGAGAACAACATCCCTTACAATGTCCTAATCTCTGATTCAGGGAAAAGGATATTCCTTCTCCCACAGGTATAACTCTTTGAACCACATTTTTACAACTACTTTGGGATTGCTTAATTATTAGCAGTTCCCAACAATTGATCACTTTCCTAACTTACATGTGTTTTGGTGGATTGGAACAGTGCTATGCGGAGAAACAAGCGCTTGGAGAGGTCAGCGCTGAACTCCTCGACACCCAAGTCAATCCTGCTGTTTGGGAGATTAGTGGACACATGGTCTTGAAGAGGAAGGAGGATTATGAGGGTGCAACTGAGGCAAATGCATGGAGGCTTCTCGCAGAGGTCTCACTCTCTGAAGCAAGGTTCCAAGAAGTGACTGCTCTCATCTTTGAAGCCATTAGTCTCAGTGTTGAAGAGAACGAGGACGGCACTGATGGTTCTCCTGAGGATCTAGATGTCACACCTCCACAGCCCATGGAGGAGATTGATGGTCTCAACACCCACAGTACCATGGTTCCCGCCTAGGGTTTTCACGGCCCAGCTCTGGTGTTCATCGCATGTTATTATTTCATGAGTTTCCATCTCTAGCTGCCCTTGTGAAATATCACTTAAATAAGGCAAAACCATGTTCAATGTATTTGATGAAATCTGGTCTGTTCCTCTGTGAATTGAACCTTGTGTATTATTGCTTTTTTCTGGTATAAGCCATGTTCTATGTATATGTAATGTGGAGTTGGTGTGTGAAATGACCCATGTATGCTGTTTCTAATTAAGACAATACTAATATAAGTTTGATTTCCCT</genome_strand>
        <mrna_strand>TTGTAGCCCCGTTTTACATCTTCCAGAGACTCCATTTGTATCGGTTCACATACAGTAGCAAAGCGCCATTATCTTACTCTACCCCATTGGCAAACCCACAGCCACAATTTTCCAATCCTCCATTATCCCTTCTACAATTTTCTATATAAATACCCACATCTCTCTGCTCTACTCCCTTATTATCAACAACAACCACCAAATTTCTTCTTTTTTTTCTTCGATAGTAGCAATCTATCAACAAAAACAGAGACCCCATCACAAGAATCTTGGAATTTTAGTGTTGGGTTTAAGAGGAAAAGGGGTTATTGTATTTTGCAGTTTTGAGGGTAAAGCCCAGTTTAACAAGTTGTAGACATCACGGCTATACACAAAGTAAACCGCCGACCACTTTTACATGTTCCAGCAGTACGTCGTAAGGGTTGTGTAACAGCTACTAACCCTGCGCCGCACGGTGGACGTGGCGCTTTGCCTTCTGAAGGTGGTAGTCCTTCCGACCTCCTCTTCCTTGCCGGCGGCGGTTCTTTCCTCTCCTTCTCCTACTAGATATAGTTATACTTACTATAGATCTCTAGCTTATTACGTACAGTTGTATCTAGTATTCTATTGATTATTCGAAGAAAACACACAAAAAGAAGTAAAGATGATGCTCAAAATTAAGAGGGTTCCTACGCTTGTTTCTAACTTTCAAAAGGATGAGGCTGATGAAATTGCTGCTCGTGGTGCTGGTTGTGGCCGGAATTGCCTCAGGAATTGCTGCCTTCCAG............................................................................................GTTCAAAGCTGCCACTGTATGGTTTCAAAAATTTGAGCTACGGCAAGTCTGTCGCCGATGAAACAAAGGAATCTCCGATCGACTTTCTGGAATCCCTTGTTCTTGGGGAA............................................................................................................TGGGAGGATCGTCAGCAGAAAGGCCTCTTTCGCTATGATGTCACTGCTTGCGAAACCAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATTCCTGGAGAATATGGTTTCGTTGCTCAACTGAATGAGGGAAGGCACCTCAAGAAGCGGCCAACTGAGTTTCGAGTTGATAAGGTTCTGCAGCCTTTTGATGGAAGCAAGTTCAACTTCACTAAGGTTGGACAGGAAGAGTTGCTCTTTCAGTTTGAAGCAAGTGAGGAAGATGAAGTCCAGCTCTATCCAGATGCGCCAATTGATCCTGAGAAATCTCCAAGTGTCGTTGCCATAAAT..........................................................................................GTCAGTCCCATTGAGTACGGACACGTGCTTTTGATCCCTAAGGTCCTTGAATGCCTTCCCCAGAGGATTGACAGGGACAGCTTCCTGCTTGCACTGCACATGGCTGCCGAAGCAGCAAACCCTTACTTCCGATTGGGTTACAACAGCTTGGGTGCATTTGCCACCATCAACCATCTTCACTTCCAG..................................................................................................................................GCTTATTTCTTGGCTGTGCAATTTCCCATTGAGAAGGCCCCAACTCAGAAGATAACTGTCACTGATGCTGGAGTGAAGATATCGGAGATGCTGCATTACCCAGTTCGAGGTCTTGTCTTTGAGGGTGGAAATACTTTGGAGGATTTGGCCGATGTTGTCTCAGATTCTTGCATTTGTCTGCAAGAGAACAACATCCCTTACAATGTCCTAATCTCTGATTCAGGGAAAAGGATATTCCTTCTCCCACAG.................................................................................................................TGCTATGCGGAGAAACAAGCGCTTGGAGAGGTCAGCGCTGAACTCCTCGACACCCAAGTCAATCCTGCTGTTTGGGAGATTAGTGGACACATGGTCTTGAAGAGGAAGGAGGATTATGAGGGTGCAACTGAGGCAAATGCATGGAGGCTTCTCGCAGAGGTCTCACTCTCTGAAGCAAGGTTCCAAGAAGTGACTGCTCTCATCTTTGAAGCCATTAGTCTCAGTGTTGAAGAGAACGAGGACGGCACTGATGGTTCTCCTGAGGATCTAGATGTCACACCTCCACAGCCCATGGAGGAGATTGATGGTCTCAACACCCACAGTACCATGGTTCCCGCCTAGGGTTTTCACGGCCCAGCTCTGGTGTTCATCGCATGTTATTATTTCATGAGTTTCCATCTCTAGCTGCCCTTGTGAAATATCACTTAAATAAGGCAAAACCATGTTCAATGTATTTGATGAAATCTGGTCTGTTCCTCTGTGAATTGAACCTTGTGTATTATTGCTTTTTTCTGGTATAAGCCATGTTCTATGTATATGTAATGTGGAGTTGGTGTGTGAAATGACCCATGTATGCTGTTTCTAATTAAGACAATACTAATATAAGTTTGATTTCCCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0117B06-OI86t/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U312647" ref_strand="+" ref_description="SGN-U312647        Tomato 200607 #1 [2 ESTs aligned] arabidopsis/peptide: | Symbol: None | expressed protein, strong similarity to unknown protein (pir::T04808) | chr5:22386321-22389093 FORWARD | Aliases: MCO15.7, MCO15_7(evalue: 2e-31, score=132) genbank/nr: gi|15240467|ref|NP_200323.1| expressed protein [Arabidopsis thaliana] gi|9758109|dbj|BAB08581.1| gene_id:MCO15.7~pir||T04808~strong similarity to unknown protein [Arabidopsis thaliana] gi|17380816|gb|AAL36095.1| unknown protein [Arabidopsis thaliana] gi|20259017|gb|AAM14224.1| unknown protein [Arabidopsis thaliana](evalue: 1e-29, score=132)">
      <seq>ctccaagtgtcgttgccataaatgtatgttcttagttagttttgcacatatactggaaccttttggtaagtagagacagtgattaatgagtttattggttttcaatgcaacaggtcagtcccattgagtacggacacgtgcttttgatccctaaggtccttgaatgccttccccagaggattgacagggacagcttcctgcttgcactgcacatggctgccgaagcagcaaacccttacttccgattgggttacaacagcttgggtgcatttgccaccatcaaccatcttcacttccaggtagagtccacgacacttcccataattgacatggttttggaattgtcagttctagttgtttgctctagtgctgactgctgagaccttaataaagaagaaggaactcactttcattgtttttgctcttcaggcttatttcttggctgtgcaatttcccattgagaaggccccaactcagaagataactgtcactgatgctggagtgaagatatcggagatgctgcattacccagttcgaggtcttgtctttgagggtggaaatactttggaggatttggccgatgttgtctcagattcttgcatttgtctgcaagagaacaacatcccttacaatgtcctaatctctgattcagggaaaaggatattccttctcccacaggtataactctttgaaccacatttttacaactactttgggattgcttaattattagcagttcccaacaattgatcactttcctaacttacatgtgttttggt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0117B06-OI86t/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0117B06.1" temp_strand="+" temp_description="C06HBa0117B06.1  AC211048.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0117B06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="150677" stop="152055"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="150977" g_stop="151755" g_length="779"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="779" r_length="779" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0117B06.1" gen_strand="+" ref_id="SGN-U312647" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>779</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0117B06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U312647" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="150977" e_stop="151755"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCCAAGTGTCGTTGCCATAAATGTATGTTCTTAGTTAGTTTTGCACATATACTGGAACCTTTTGGTAAGTAGAGACAGTGATTAATGAGTTTATTGGTTTTCAATGCAACAGGTCAGTCCCATTGAGTACGGACACGTGCTTTTGATCCCTAAGGTCCTTGAATGCCTTCCCCAGAGGATTGACAGGGACAGCTTCCTGCTTGCACTGCACATGGCTGCCGAAGCAGCAAACCCTTACTTCCGATTGGGTTACAACAGCTTGGGTGCATTTGCCACCATCAACCATCTTCACTTCCAGGTAGAGTCCACGACACTTCCCATAATTGACATGGTTTTGGAATTGTCAGTTCTAGTTGTTTGCTCTAGTGCTGACTGCTGAGACCTTAATAAAGAAGAAGGAACTCACTTTCATTGTTTTTGCTCTTCAGGCTTATTTCTTGGCTGTGCAATTTCCCATTGAGAAGGCCCCAACTCAGAAGATAACTGTCACTGATGCTGGAGTGAAGATATCGGAGATGCTGCATTACCCAGTTCGAGGTCTTGTCTTTGAGGGTGGAAATACTTTGGAGGATTTGGCCGATGTTGTCTCAGATTCTTGCATTTGTCTGCAAGAGAACAACATCCCTTACAATGTCCTAATCTCTGATTCAGGGAAAAGGATATTCCTTCTCCCACAGGTATAACTCTTTGAACCACATTTTTACAACTACTTTGGGATTGCTTAATTATTAGCAGTTCCCAACAATTGATCACTTTCCTAACTTACATGTGTTTTGGT</genome_strand>
        <mrna_strand>CTCCAAGTGTCGTTGCCATAAATGTATGTTCTTAGTTAGTTTTGCACATATACTGGAACCTTTTGGTAAGTAGAGACAGTGATTAATGAGTTTATTGGTTTTCAATGCAACAGGTCAGTCCCATTGAGTACGGACACGTGCTTTTGATCCCTAAGGTCCTTGAATGCCTTCCCCAGAGGATTGACAGGGACAGCTTCCTGCTTGCACTGCACATGGCTGCCGAAGCAGCAAACCCTTACTTCCGATTGGGTTACAACAGCTTGGGTGCATTTGCCACCATCAACCATCTTCACTTCCAGGTAGAGTCCACGACACTTCCCATAATTGACATGGTTTTGGAATTGTCAGTTCTAGTTGTTTGCTCTAGTGCTGACTGCTGAGACCTTAATAAAGAAGAAGGAACTCACTTTCATTGTTTTTGCTCTTCAGGCTTATTTCTTGGCTGTGCAATTTCCCATTGAGAAGGCCCCAACTCAGAAGATAACTGTCACTGATGCTGGAGTGAAGATATCGGAGATGCTGCATTACCCAGTTCGAGGTCTTGTCTTTGAGGGTGGAAATACTTTGGAGGATTTGGCCGATGTTGTCTCAGATTCTTGCATTTGTCTGCAAGAGAACAACATCCCTTACAATGTCCTAATCTCTGATTCAGGGAAAAGGATATTCCTTCTCCCACAGGTATAACTCTTTGAACCACATTTTTACAACTACTTTGGGATTGCTTAATTATTAGCAGTTCCCAACAATTGATCACTTTCCTAACTTACATGTGTTTTGGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0117B06-OI86t/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U324014" ref_strand="+" ref_description="SGN-U324014        Tomato 200607 #1 [6 ESTs aligned] arabidopsis/peptide: | Symbol: None | expressed protein | chr2:18079448-18080040 FORWARD | Aliases: T1O24.28(evalue: 2e-27, score=119) genbank/nr: gi|18406272|ref|NP_566001.1| expressed protein [Arabidopsis thaliana] gi|25370827|pir||D84867 hypothetical protein At2g43540 [imported] - Arabidopsis thaliana gi|2288994|gb|AAB64323.1| expressed protein [Arabidopsis thaliana] gi|21555198|gb|AAM63802.1| unknown [Arabidopsis thaliana](evalue: 1e-25, score=119)">
      <seq>cggccgaattgacagctatggggctctcagcttctaagagagttagcaattcactccaaaattcatccgaattcaactcggcatgtgattcagtctatgatgattgtctctccctatcacagcacgctttcgccggagtgaaaccctaccagcttttctccgccgtggaacgcctgcacgcttctctctctccctccgtacctctcataaaaaattgggttaaatcgcctccgacccgattacaggtcgataaggccttcaaaatcgtgtcaacgcgccgatccggcgaaaaggagagtgaaattgtgcttgggaacgaggaattcaaggagttctcagtggaggtattttcggacgctgtcgtttcgtgtgcagggaaagagcttctaaagcgggttccggttggtgctttggggatcgctggcgttggtgcggtggtgaagcctgggaaagaattaattgcggcggcgattggtgcttacgcgctcggtgttgcaacatcggtatacgtcagcttggcttaaacgtattttttttgtttttttttaaaattacaaaaatgaataaaagtttttacaagtttggttaagcccaaaagtacaaattagtcatgttttaaattattataacccctaataagagactgaaagcaagtagaataattgtaattagatgattaacagtctttatccacatttatataatttgtataaattattttttttttaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0117B06-OI86t/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0117B06.1" temp_strand="-" temp_description="C06HBa0117B06.1  AC211048.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0117B06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="159123" stop="157788"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="158820" g_stop="158092" g_length="729"/>
          <reference_exon_boundary r_type="cDNA" r_start="10" r_stop="738" r_length="729" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="739" polyA_stop="761"/>
      <MATCH_line gen_id="C06HBa0117B06.1" gen_strand="-" ref_id="SGN-U324014" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>729</cumulative_length_of_scored_exons>
        <coverage percentage="0.958" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0117B06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U324014" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="158820" e_stop="158092"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTACAGCTATGGGGCTCTCAGCTTCTAAGAGAGTTAGCAATTCACTCCAAAATTCATCCGAATTCAACTCGGCATGTGATTCAGTCTATGATGATTGTCTCTCCCTATCACAGCACGCTTTCGCCGGAGTGAAACCCTACCAGCTTTTCTCCGCCGTGGAACGCCTGCACGCTTCTCTCTCTCCCTCCGTACCTCTCATAAAAAATTGGGTTAAATCGCCTCCGACCCGATTACAGGTCGATAAGGCCTTCAAAATCGTGTCAACGCGCCGATCCGGCGAAAAGGAGAGTGAAATTGTGCTTGGGAACGAGGAATTCAAGGAGTTCTCAGTGGAGGTATTTTCGGACGCTGTCGTTTCGTGTGCAGGGAAAGAGCTTCTAAAGCGGGTTCCGGTTGGTGCTTTGGGGATCGCTGGCGTTGGTGCGGTGGTGAAGCCTGGGAAAGAATTAATTGCGGCGGCGATTGGTGCTTACGCGCTCGGTGTTGCAACATCGGTATACGTCAGCTTGGCTTAAACGTATTTTTTTTGTTTTTTTTTAAAATTACAAAAATGAATAAAAGTTTTTACAAGTTTGGTTAAGCCCAAAAGTACAAATTAGTCATGTTTTAAATTATTATAACCCCTAATAAGAGACTGAAAGCAAGTAGAATAATTGTAATTAGATGATTAACAGTCTTTATCCACATTTATATAATTTGTATAAATTATTTTTTTTTTATAAAAAAAAA</genome_strand>
        <mrna_strand>TGACAGCTATGGGGCTCTCAGCTTCTAAGAGAGTTAGCAATTCACTCCAAAATTCATCCGAATTCAACTCGGCATGTGATTCAGTCTATGATGATTGTCTCTCCCTATCACAGCACGCTTTCGCCGGAGTGAAACCCTACCAGCTTTTCTCCGCCGTGGAACGCCTGCACGCTTCTCTCTCTCCCTCCGTACCTCTCATAAAAAATTGGGTTAAATCGCCTCCGACCCGATTACAGGTCGATAAGGCCTTCAAAATCGTGTCAACGCGCCGATCCGGCGAAAAGGAGAGTGAAATTGTGCTTGGGAACGAGGAATTCAAGGAGTTCTCAGTGGAGGTATTTTCGGACGCTGTCGTTTCGTGTGCAGGGAAAGAGCTTCTAAAGCGGGTTCCGGTTGGTGCTTTGGGGATCGCTGGCGTTGGTGCGGTGGTGAAGCCTGGGAAAGAATTAATTGCGGCGGCGATTGGTGCTTACGCGCTCGGTGTTGCAACATCGGTATACGTCAGCTTGGCTTAAACGTATTTTTTTTGTTTTTTTTTAAAATTACAAAAATGAATAAAAGTTTTTACAAGTTTGGTTAAGCCCAAAAGTACAAATTAGTCATGTTTTAAATTATTATAACCCCTAATAAGAGACTGAAAGCAAGTAGAATAATTGTAATTAGATGATTAACAGTCTTTATCCACATTTATATAATTTGTATAAATTATTTTTTTTTTAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0117B06-OI86t/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U327524" ref_strand="+" ref_description="SGN-U327524        Tomato 200607 #1 [3 ESTs aligned] arabidopsis/peptide: | Symbol: None | BURP domain-containing protein / polygalacturonase, putative, similar to polygalacturonase isoenzyme 1 beta subunit (Lycopersicon esculentum) GI:170480; contains Pfam profile PF03181: BURP domain | chr1:26516385-26518851 REVERSE | Aliases: F17O7.9, F17O7_9(evalue: 5e-35, score=145) genbank/nr: gi|15223133|ref|NP_177194.1| aromatic rich glyco protein -related [Arabidopsis thaliana] gi|7488153|pir||T01485 probable polygalacturonase (EC 3.2.1.15) 1 beta chain F17O7.9 - Arabidopsis thaliana gi|3176680|gb|AAC18803.1| Identical to polygalacuronase isoenzyme 1 beta subunit homolog mRNA gb|U63373.  EST gb|AA404878 comes from this gene. [Arabidopsis thaliana](evalue: 4e-33, score=145)">
      <seq>atattttgtacttctgagactaatgcccaaacatccaaaatcaccaatctagattctaagatattctacacaaccagaacccctgatcaagctaaagtctatgctaaactcccaaatcaagccaaagtttatccctccaaaattcctaatcaagctaaggtctacacaaccaaaatccctaatctagattctaagatattctacgcgaccagaacccctgatcaagccaaggtctatccagctaatcttcccgaacaagctaaggtctatacatcaaaaatttatgcaacttcacactctcatagtcatcatcttggagaagtctctttcttcagagtctctaccctcaaacctggaaacacagtccatctagacaacttagtgaacccgttccctcatcgctcatttcttccatcacaaattgcctcaaagatctccattaactcaaaccatctccaacacttattccctcaaactttcacttcaccatacacaaaagataccacaaaaactaccatcctcaattgcaatgcacctactctaaaaggagaagttaaaacatgcgcgaaatccttggaagaaatgatagagttctcaaagagaagcttgaaacagaaccacctaatttcattgacaacagaaagcatacaagggtcaggacagaaactaaaaattgagaaatttcataaaatcaattcccaaaggagtgtctcatgccatgagatattccttccttttgctacatacttttgtcatttgctatcttcaactaacatttacgcggtggagctagttgatttaaacactaatgttcatgttaataaagctatggttgtttgtcatatggatacttcttcttggccagctgatcatccagttttcaaaaaattgaatttttcacctggaaatggagaggtttgtcattggatgtcacaagctgatcttgtttgggttggagatgatgcgcatgcataaaataattttttaaaaaaagtctacttatgttaattaagctttgagtttaattgtaaaaatggattgtcttttttcttgtttctatgtgtttaggaatagtaaggtattgtaattatggggaaaaaagtccaaatccttactttccctttcttgtgtgaagtgtgaattgtgatggtttttggtctttttatgtgtattttaataacttgcagttaatactcctattctaagttactggaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0117B06-OI86t/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0117B06.1" temp_strand="-" temp_description="C06HBa0117B06.1  AC211048.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0117B06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="162241" stop="160427"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="161941" g_stop="160731" g_length="1211"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="1211" r_length="1211" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="1214" polyA_stop="1226"/>
      <MATCH_line gen_id="C06HBa0117B06.1" gen_strand="-" ref_id="SGN-U327524" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>1211</cumulative_length_of_scored_exons>
        <coverage percentage="0.988" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0117B06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U327524" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="161941" e_stop="160731"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATATTTTGTACTTCTGAGACTAATGCCCAAACATCCAAAATCACCAATCTAGATTCTAAGATATTCTACACAACCAGAACCCCTGATCAAGCTAAAGTCTATGCTAAACTCCCAAATCAAGCCAAAGTTTATCCCTCCAAAATTCCTAATCAAGCTAAGGTCTACACAACCAAAATCCCTAATCTAGATTCTAAGATATTCTACGCGACCAGAACCCCTGATCAAGCCAAGGTCTATCCAGCTAATCTTCCCGAACAAGCTAAGGTCTATACATCAAAAATTTATGCAACTTCACACTCTCATAGTCATCATCTTGGAGAAGTCTCTTTCTTCAGAGTCTCTACCCTCAAACCTGGAAACACAGTCCATCTAGACAACTTAGTGAACCCGTTCCCTCATCGCTCATTTCTTCCATCACAAATTGCCTCAAAGATCTCCATTAACTCAAACCATCTCCAACACTTATTCCCTCAAACTTTCACTTCACCATACACAAAAGATACCACAAAAACTACCATCCTCAATTGCAATGCACCTACTCTAAAAGGAGAAGTTAAAACATGCGCGAAATCCTTGGAAGAAATGATAGAGTTCTCAAAGAGAAGCTTGAAACAGAACCACCTAATTTCATTGACAACAGAAAGCATACAAGGGTCAGGACAGAAACTAAAAATTGAGAAATTTCATAAAATCAATTCCCAAAGGAGTGTCTCATGCCATGAGATATTCCTTCCTTTTGCTACATACTTTTGTCATTTGCTATCTTCAACTAACATTTACGCGGTGGAGCTAGTTGATTTAAACACTAATGTTCATGTTAATAAAGCTATGGTTGTTTGTCATATGGATACTTCTTCTTGGCCAGCTGATCATCCAGTTTTCAAAAAATTGAATTTTTCACCTGGAAATGGAGAGGTTTGTCATTGGATGTCACAAGCTGATCTTGTTTGGGTTGGAGATGATGCGCATGCATAAAATAATTTTTTAAAAAAAGTCTACTTATGTTAATTAAGCTTTGAGTTTAATTGTAAAAATGGATTGTCTTTTTTCTTGTTTCTATGTGTTTAGGAATAGTAAGGTATTGTAATTATGGGGAAAAAAGTCCAAATCCTTACTTTCCCTTTCTTGTGTGAAGTGTGAATTGTGATGGTTTTTGGTCTTTTTATGTGTATTTTAATAACTTGCAGTTAATACTCCTATTCTAAGTTACT</genome_strand>
        <mrna_strand>ATATTTTGTACTTCTGAGACTAATGCCCAAACATCCAAAATCACCAATCTAGATTCTAAGATATTCTACACAACCAGAACCCCTGATCAAGCTAAAGTCTATGCTAAACTCCCAAATCAAGCCAAAGTTTATCCCTCCAAAATTCCTAATCAAGCTAAGGTCTACACAACCAAAATCCCTAATCTAGATTCTAAGATATTCTACGCGACCAGAACCCCTGATCAAGCCAAGGTCTATCCAGCTAATCTTCCCGAACAAGCTAAGGTCTATACATCAAAAATTTATGCAACTTCACACTCTCATAGTCATCATCTTGGAGAAGTCTCTTTCTTCAGAGTCTCTACCCTCAAACCTGGAAACACAGTCCATCTAGACAACTTAGTGAACCCGTTCCCTCATCGCTCATTTCTTCCATCACAAATTGCCTCAAAGATCTCCATTAACTCAAACCATCTCCAACACTTATTCCCTCAAACTTTCACTTCACCATACACAAAAGATACCACAAAAACTACCATCCTCAATTGCAATGCACCTACTCTAAAAGGAGAAGTTAAAACATGCGCGAAATCCTTGGAAGAAATGATAGAGTTCTCAAAGAGAAGCTTGAAACAGAACCACCTAATTTCATTGACAACAGAAAGCATACAAGGGTCAGGACAGAAACTAAAAATTGAGAAATTTCATAAAATCAATTCCCAAAGGAGTGTCTCATGCCATGAGATATTCCTTCCTTTTGCTACATACTTTTGTCATTTGCTATCTTCAACTAACATTTACGCGGTGGAGCTAGTTGATTTAAACACTAATGTTCATGTTAATAAAGCTATGGTTGTTTGTCATATGGATACTTCTTCTTGGCCAGCTGATCATCCAGTTTTCAAAAAATTGAATTTTTCACCTGGAAATGGAGAGGTTTGTCATTGGATGTCACAAGCTGATCTTGTTTGGGTTGGAGATGATGCGCATGCATAAAATAATTTTTTAAAAAAAGTCTACTTATGTTAATTAAGCTTTGAGTTTAATTGTAAAAATGGATTGTCTTTTTTCTTGTTTCTATGTGTTTAGGAATAGTAAGGTATTGTAATTATGGGGAAAAAAGTCCAAATCCTTACTTTCCCTTTCTTGTGTGAAGTGTGAATTGTGATGGTTTTTGGTCTTTTTATGTGTATTTTAATAACTTGCAGTTAATACTCCTATTCTAAGTTACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>39</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="+" PGL_start="4814" PGL_stop="8411"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="4814" e_stop="5300"/>
            <exon e_start="7131" e_stop="7474"/>
            <exon e_start="8380" e_stop="8411"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.977" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.983"/>
          <exon-only e_score="0.656"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="4814" e_stop="5300" e_length="487"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.977">
            <gDNA_intron_boundary i_start="5301" i_stop="7130" i_length="1830"/>
          </intron>
          <exon e_serial="2" e_score="0.983">
            <gDNA_exon_boundary e_start="7131" e_stop="7474" e_length="344"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="7475" i_stop="8379" i_length="905"/>
          </intron>
          <exon e_serial="3" e_score="0.656">
            <gDNA_exon_boundary e_start="8380" e_stop="8411" e_length="32"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="4814" stop="5300"/>
              <exon start="7131" stop="7474"/>
              <exon start="8380" stop="8411"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U327900" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TGAAAATGTGATTGGAGGAAGTTCCAGTGAGGAGGCACTTCACCAGGTGCATGATGTCAAGGTGGATGAAGACCTTCCTGAAAGGGAGGACCTTATATTAGAAGAAGCACAATCTCTCGATAATTCAACTTCAGATGAACCTTTCGTTGGCCTGGAGTTTGAATCTGAAGCCGCAGCACATGCATTTTATAATGCATATGCAACAAGGGTGGGTTTTATCATCCGGGTTAGTAAGCTTTCGCGATCTAGGCGTGATGGCTCCGCCATTGGTCGAGCACTAGTTTGCAACAAGGAGGGTTTTAGAATGCCTGATAAGCGGGAAAAGATTGTGCGACAGAGAGCAGAAACAAGGGTTGGTTGCAGAGCAATGATATTAGTTAGAAAAATAAGCTCTGGGAAATGGGTTGTCACAAAATTTGTCAAGGAGCACTCTCATCCATTGTGCCCAGGCAAAGGTCGCAGGGACTTGATCTATGATCAATACCCG : AACGAGCATGACAAAATCCGGGAACTATCTCAACAACTGGCAGCTGAGAAAAAGCGATCTGCTACATATAAGAGGCATTTGGAAATGATTTTCGAGCACATTGAGGAGCACAATCAATCTCTGTCTAAGAAGATCCAAGATATTGTACACAATGTTAGGGAGTTGGAGTCCAGAGATGAACATCATCATAGATAGTTTTAGCTTAATATGCCTTTGTTGATATTAGTGTAGAACCTAAGTTCAGTAAAGATCATAATGATTACTGTCTTGACTTGCCTTTTTTTCCCTCTCCCTGTTATCCTTTTCATTTTCTTTGGGAAGAGTATGAAAAATTTAAAACCAGA : AAAAGAAAAACTTTATAAAATTTTAAAAAATA</gDNA_template>
            <first_frame> *  K  C  D  W  R  K  F  Q  *  G  G  T  S  P  G  A  *  C  Q  G  G  *  R  P  S  *  K  G  G  P  Y  I  R  R  S  T  I  S  R  *  F  N  F  R  *  T  F  R  W  P  G  V  *  I  *  S  R  S  T  C  I  L  *  C  I  C  N  K  G  G  F  Y  H  P  G  *  *  A  F  A  I  *  A  *  W  L  R  H  W  S  S  T  S  L  Q  Q  G  G  F  *  N  A  *  *  A  G  K  D  C  A  T  E  S  R  N  K  G  W  L  Q  S  N  D  I  S  *  K  N  K  L  W  E  M  G  C  H  K  I  C  Q  G  A  L  S  S  I  V  P  R  Q  R  S  Q  G  L  D  L  *  S  I  P   : E  R  A  *  Q  N  P  G  T  I  S  T  T  G  S  *  E  K  A  I  C  Y  I  *  E  A  F  G  N  D  F  R  A  H  *  G  A  Q  S  I  S  V  *  E  D  P  R  Y  C  T  Q  C  *  G  V  G  V  Q  R  *  T  S  S  *  I  V  L  A  *  Y  A  F  V  D  I  S  V  E  P  K  F  S  K  D  H  N  D  Y  C  L  D  L  P  F  F  P  S  P  C  Y  P  F  H  F  L  W  E  E  Y  E  K  F  K  T  R  :  K  R  K  T  L  *  N  F  K  K   </first_frame>
            <second_frame>  E  N  V  I  G  G  S  S  S  E  E  A  L  H  Q  V  H  D  V  K  V  D  E  D  L  P  E  R  E  D  L  I  L  E  E  A  Q  S  L  D  N  S  T  S  D  E  P  F  V  G  L  E  F  E  S  E  A  A  A  H  A  F  Y  N  A  Y  A  T  R  V  G  F  I  I  R  V  S  K  L  S  R  S  R  R  D  G  S  A  I  G  R  A  L  V  C  N  K  E  G  F  R  M  P  D  K  R  E  K  I  V  R  Q  R  A  E  T  R  V  G  C  R  A  M  I  L  V  R  K  I  S  S  G  K  W  V  V  T  K  F  V  K  E  H  S  H  P  L  C  P  G  K  G  R  R  D  L  I  Y  D  Q  Y  P  :  N  E  H  D  K  I  R  E  L  S  Q  Q  L  A  A  E  K  K  R  S  A  T  Y  K  R  H  L  E  M  I  F  E  H  I  E  E  H  N  Q  S  L  S  K  K  I  Q  D  I  V  H  N  V  R  E  L  E  S  R  D  E  H  H  H  R  *  F  *  L  N  M  P  L  L  I  L  V  *  N  L  S  S  V  K  I  I  M  I  T  V  L  T  C  L  F  F  P  L  P  V  I  L  F  I  F  F  G  K  S  M  K  N  L  K  P  E :   K  E  K  L  Y  K  I  L  K  N  </second_frame>
            <third_frame>   K  M  *  L  E  E  V  P  V  R  R  H  F  T  R  C  M  M  S  R  W  M  K  T  F  L  K  G  R  T  L  Y  *  K  K  H  N  L  S  I  I  Q  L  Q  M  N  L  S  L  A  W  S  L  N  L  K  P  Q  H  M  H  F  I  M  H  M  Q  Q  G  W  V  L  S  S  G  L  V  S  F  R  D  L  G  V  M  A  P  P  L  V  E  H  *  F  A  T  R  R  V  L  E  C  L  I  S  G  K  R  L  C  D  R  E  Q  K  Q  G  L  V  A  E  Q  *  Y  *  L  E  K  *  A  L  G  N  G  L  S  Q  N  L  S  R  S  T  L  I  H  C  A  Q  A  K  V  A  G  T  *  S  M  I  N  T  R :   T  S  M  T  K  S  G  N  Y  L  N  N  W  Q  L  R  K  S  D  L  L  H  I  R  G  I  W  K  *  F  S  S  T  L  R  S  T  I  N  L  C  L  R  R  S  K  I  L  Y  T  M  L  G  S  W  S  P  E  M  N  I  I  I  D  S  F  S  L  I  C  L  C  *  Y  *  C  R  T  *  V  Q  *  R  S  *  *  L  L  S  *  L  A  F  F  S  L  S  L  L  S  F  S  F  S  L  G  R  V  *  K  I  *  N  Q   : K  K  K  N  F  I  K  F  *  K  I </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0117B06.1" strand="+"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="4815" stop="5300"/>
                    <exon start="7131" stop="7325"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>678</number_coding_nucleotides>
                  <number_encoded_amino_acids>226</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ENVIGGSSSEEALHQVHDVKVDEDLPEREDLILEEAQSLDNSTSDEPFVGLEFESEAAAHAFYNAYATRVGFIIRVSKLSRSRRDGSAIGRALVCNKEGFRMPDKREKIVRQRAETRVGCRAMILVRKISSGKWVVTKFVKEHSHPLCPGKGRRDLIYDQYPNEHDKIRELSQQLAAEKKRSATYKRHLEMIFEHIEEHNQSLSKKIQDIVHNVRELESRDEHHHR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="+" PGL_start="11726" PGL_stop="22508"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="11726" e_stop="12165"/>
            <exon e_start="13000" e_stop="13122"/>
            <exon e_start="13229" e_stop="13583"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.995" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="11726" e_stop="12165" e_length="440"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="1.000">
            <gDNA_intron_boundary i_start="12166" i_stop="12999" i_length="834"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="13000" e_stop="13122" e_length="123"/>
          </exon>
          <intron i_serial="2" don_prob="1.000" acc_prob="0.995">
            <gDNA_intron_boundary i_start="13123" i_stop="13228" i_length="106"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="13229" e_stop="13583" e_length="355"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11726" stop="12165"/>
              <exon start="13000" stop="13122"/>
              <exon start="13229" stop="13583"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U312536" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="13051" stop="13122"/>
              <exon start="13229" stop="13572"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U333641" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GGTTTTAGCGATCACCATATTCACACACACAGTCGGAGAGAGAGTGTGAGAGGAATTTAGAGAAGATGAAGACAATTCTGTCATCAGAAACCATGGATATCCCCGACGGCATCACCATCAAGGTGAAGGCGAAGCAAATCGAAGTTGAAGGACCAAGGGGAAAGCTTGTGAGAAACTTCAAGCATCTCAATCTCGATTTCCAGCTGATCAAGGACGAGGAAACTGGACAGAAGAAGCTGAAGGTTGATGCCTGGTTTGGATCTCGAAAGGCTACTGCTTCTATCCGTACCGCTCTTAGCCATGTCAATAATCTCATCGTTGGTGTTACCAAGGGATACAGATACAAGATGCGTTTTGTATATGCTCACTTTCCGATCAATGCCTCCATCACCGGAGGTAACAAGTCCATTGAGATCCGTAACTTCCTTGGCGAGAAAAAG : GTTAGGAAAGTTGACATGCTTGATGGAGTAACAGTTGTTCGATCTGAGAAGGTTAAGGACGAGCTTGTGTTGGATGGAAATGACATTGAGCTTGTTTCTCGCTCTGCTGCCCTCATTAACCAA : AAATGCCATGTGAAGAACAAGGATATCCGAAAGTTTCTTGATGGTATCTATGTCAGCGAGAAGGGTAAAATTGTCGAAGAAGAATGAGTATTTTAGAAGTAGGCATGTTGGTGATGGACCATATCCCAAATCCTCGTTTTACCATTTCTTTCAAGTTTTTTTGGAGACCATATATTACAGACTTGTTTGAATTTCAGTTTTCTAGTTCTTGTGTTGAAATTTTGTTGACAAAGTGGCCTTGGTGGTTCTTTCAATTACACCAAATGTTTCTGTTCTCGTTATCTTTTGAGTGAAAATTGTTAAATCCCAAGTTGCAACTATGTTATATATATCATAGCTTTTGAGTTTTGCATAA</gDNA_template>
            <first_frame> G  F  S  D  H  H  I  H  T  H  S  R  R  E  S  V  R  G  I  *  R  R  *  R  Q  F  C  H  Q  K  P  W  I  S  P  T  A  S  P  S  R  *  R  R  S  K  S  K  L  K  D  Q  G  E  S  L  *  E  T  S  S  I  S  I  S  I  S  S  *  S  R  T  R  K  L  D  R  R  S  *  R  L  M  P  G  L  D  L  E  R  L  L  L  L  S  V  P  L  L  A  M  S  I  I  S  S  L  V  L  P  R  D  T  D  T  R  C  V  L  Y  M  L  T  F  R  S  M  P  P  S  P  E  V  T  S  P  L  R  S  V  T  S  L  A  R  K  R :   L  G  K  L  T  C  L  M  E  *  Q  L  F  D  L  R  R  L  R  T  S  L  C  W  M  E  M  T  L  S  L  F  L  A  L  L  P  S  L  T  K :   N  A  M  *  R  T  R  I  S  E  S  F  L  M  V  S  M  S  A  R  R  V  K  L  S  K  K  N  E  Y  F  R  S  R  H  V  G  D  G  P  Y  P  K  S  S  F  Y  H  F  F  Q  V  F  L  E  T  I  Y  Y  R  L  V  *  I  S  V  F  *  F  L  C  *  N  F  V  D  K  V  A  L  V  V  L  S  I  T  P  N  V  S  V  L  V  I  F  *  V  K  I  V  K  S  Q  V  A  T  M  L  Y  I  S  *  L  L  S  F  A  * </first_frame>
            <second_frame>  V  L  A  I  T  I  F  T  H  T  V  G  E  R  V  *  E  E  F  R  E  D  E  D  N  S  V  I  R  N  H  G  Y  P  R  R  H  H  H  Q  G  E  G  E  A  N  R  S  *  R  T  K  G  K  A  C  E  K  L  Q  A  S  Q  S  R  F  P  A  D  Q  G  R  G  N  W  T  E  E  A  E  G  *  C  L  V  W  I  S  K  G  Y  C  F  Y  P  Y  R  S  *  P  C  Q  *  S  H  R  W  C  Y  Q  G  I  Q  I  Q  D  A  F  C  I  C  S  L  S  D  Q  C  L  H  H  R  R  *  Q  V  H  *  D  P  *  L  P  W  R  E  K   : G  *  E  S  *  H  A  *  W  S  N  S  C  S  I  *  E  G  *  G  R  A  C  V  G  W  K  *  H  *  A  C  F  S  L  C  C  P  H  *  P   : K  M  P  C  E  E  Q  G  Y  P  K  V  S  *  W  Y  L  C  Q  R  E  G  *  N  C  R  R  R  M  S  I  L  E  V  G  M  L  V  M  D  H  I  P  N  P  R  F  T  I  S  F  K  F  F  W  R  P  Y  I  T  D  L  F  E  F  Q  F  S  S  S  C  V  E  I  L  L  T  K  W  P  W  W  F  F  Q  L  H  Q  M  F  L  F  S  L  S  F  E  *  K  L  L  N  P  K  L  Q  L  C  Y  I  Y  H  S  F  *  V  L  H   </second_frame>
            <third_frame>   F  *  R  S  P  Y  S  H  T  Q  S  E  R  E  C  E  R  N  L  E  K  M  K  T  I  L  S  S  E  T  M  D  I  P  D  G  I  T  I  K  V  K  A  K  Q  I  E  V  E  G  P  R  G  K  L  V  R  N  F  K  H  L  N  L  D  F  Q  L  I  K  D  E  E  T  G  Q  K  K  L  K  V  D  A  W  F  G  S  R  K  A  T  A  S  I  R  T  A  L  S  H  V  N  N  L  I  V  G  V  T  K  G  Y  R  Y  K  M  R  F  V  Y  A  H  F  P  I  N  A  S  I  T  G  G  N  K  S  I  E  I  R  N  F  L  G  E  K  K  :  V  R  K  V  D  M  L  D  G  V  T  V  V  R  S  E  K  V  K  D  E  L  V  L  D  G  N  D  I  E  L  V  S  R  S  A  A  L  I  N  Q  :  K  C  H  V  K  N  K  D  I  R  K  F  L  D  G  I  Y  V  S  E  K  G  K  I  V  E  E  E  *  V  F  *  K  *  A  C  W  *  W  T  I  S  Q  I  L  V  L  P  F  L  S  S  F  F  G  D  H  I  L  Q  T  C  L  N  F  S  F  L  V  L  V  L  K  F  C  *  Q  S  G  L  G  G  S  F  N  Y  T  K  C  F  C  S  R  Y  L  L  S  E  N  C  *  I  P  S  C  N  Y  V  I  Y  I  I  A  F  E  F  C  I  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0117B06.1" strand="+"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="11734" stop="12165"/>
                    <exon start="13000" stop="13122"/>
                    <exon start="13229" stop="13315"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>639</number_coding_nucleotides>
                  <number_encoded_amino_acids>213</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RSPYSHTQSERECERNLEKMKTILSSETMDIPDGITIKVKAKQIEVEGPRGKLVRNFKHLNLDFQLIKDEETGQKKLKVDAWFGSRKATASIRTALSHVNNLIVGVTKGYRYKMRFVYAHFPINASITGGNKSIEIRNFLGEKKVRKVDMLDGVTVVRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSEKGKIVEEE*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0117B06.1" strand="+"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="13297" stop="13521"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>222</number_coding_nucleotides>
                  <number_encoded_amino_acids>74</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NCRRRMSILEVGMLVMDHIPNPRFTISFKFFWRPYITDLFEFQFSSSCVEILLTKWPWWFFQLHQMFLFSLSFE*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="15978" e_stop="16719"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.972"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.972">
            <gDNA_exon_boundary e_start="15978" e_stop="16719" e_length="742"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15978" stop="16719"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U313856" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15997" stop="16623"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U334627" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TCCATTTCATCCAGCCGAGAGAGATAGTGTGTGTGTGTGAGAGAGATTCAGAGGCGGCGAGGATGGTGAAGTTTTTGAAGCCAAACAAAGCTGTTATCCTTCTTCAAGGCAAGTATGCCGGCCGGAAAGCTGTGATCGTAAGGGCATTTGATGAAGGAACAAGGGACAGGCCATATGGCCATTGTTTGGTCGCAGGTATCTCCAAGTACCCGAAGAAGGTGATCCGCAAGGATTCAGCAAAGAAGCAGGCGAAGAAATCTCGTGTTAAGGCTTTCATCAAGCTCGTGAACTACAACCACATCATGCCTACTCGTTACACACTCGATGTGGATCTGAAGGATGTTGTCAATGCTGATGTTCTTCAGGCACGTGACAAGAAGGTGACCGCTGCAAAGGAGACCAAGGCTAGGCTTGAGGAGAGGTTCAAGACCGGGAAAAATCGCTGGTTCTTTACCAAGCTTAGGTTCTGAGCGAAGATTGAATCCGATTTTGATGAAATGGTAATTTTTTTTAGTATTAAAGAGTTTTGAGGAATGTGTTTGTTATCAAAGATACTATTAGGCTGTTTTTGTGTTTGCACTATTTTATTGATGGATAATTCCTGGCTCTTGTTTCAGTTACCTACAGTTTTATAATGGCTTGTTTCTAATGTTTGAGTAGCTTGATATTTCTATATTCCTGAGTCTATGTTTTGCTATTGTTAATTAGACGCTGCAGTAGCCAATTTACTGCTCTCATGTCT</gDNA_template>
            <first_frame> S  I  S  S  S  R  E  R  *  C  V  C  V  R  E  I  Q  R  R  R  G  W  *  S  F  *  S  Q  T  K  L  L  S  F  F  K  A  S  M  P  A  G  K  L  *  S  *  G  H  L  M  K  E  Q  G  T  G  H  M  A  I  V  W  S  Q  V  S  P  S  T  R  R  R  *  S  A  R  I  Q  Q  R  S  R  R  R  N  L  V  L  R  L  S  S  S  S  *  T  T  T  T  S  C  L  L  V  T  H  S  M  W  I  *  R  M  L  S  M  L  M  F  F  R  H  V  T  R  R  *  P  L  Q  R  R  P  R  L  G  L  R  R  G  S  R  P  G  K  I  A  G  S  L  P  S  L  G  S  E  R  R  L  N  P  I  L  M  K  W  *  F  F  L  V  L  K  S  F  E  E  C  V  C  Y  Q  R  Y  Y  *  A  V  F  V  F  A  L  F  Y  *  W  I  I  P  G  S  C  F  S  Y  L  Q  F  Y  N  G  L  F  L  M  F  E  *  L  D  I  S  I  F  L  S  L  C  F  A  I  V  N  *  T  L  Q  *  P  I  Y  C  S  H  V  </first_frame>
            <second_frame>  P  F  H  P  A  E  R  D  S  V  C  V  *  E  R  F  R  G  G  E  D  G  E  V  F  E  A  K  Q  S  C  Y  P  S  S  R  Q  V  C  R  P  E  S  C  D  R  K  G  I  *  *  R  N  K  G  Q  A  I  W  P  L  F  G  R  R  Y  L  Q  V  P  E  E  G  D  P  Q  G  F  S  K  E  A  G  E  E  I  S  C  *  G  F  H  Q  A  R  E  L  Q  P  H  H  A  Y  S  L  H  T  R  C  G  S  E  G  C  C  Q  C  *  C  S  S  G  T  *  Q  E  G  D  R  C  K  G  D  Q  G  *  A  *  G  E  V  Q  D  R  E  K  S  L  V  L  Y  Q  A  *  V  L  S  E  D  *  I  R  F  *  *  N  G  N  F  F  *  Y  *  R  V  L  R  N  V  F  V  I  K  D  T  I  R  L  F  L  C  L  H  Y  F  I  D  G  *  F  L  A  L  V  S  V  T  Y  S  F  I  M  A  C  F  *  C  L  S  S  L  I  F  L  Y  S  *  V  Y  V  L  L  L  L  I  R  R  C  S  S  Q  F  T  A  L  M  S </second_frame>
            <third_frame>   H  F  I  Q  P  R  E  I  V  C  V  C  E  R  D  S  E  A  A  R  M  V  K  F  L  K  P  N  K  A  V  I  L  L  Q  G  K  Y  A  G  R  K  A  V  I  V  R  A  F  D  E  G  T  R  D  R  P  Y  G  H  C  L  V  A  G  I  S  K  Y  P  K  K  V  I  R  K  D  S  A  K  K  Q  A  K  K  S  R  V  K  A  F  I  K  L  V  N  Y  N  H  I  M  P  T  R  Y  T  L  D  V  D  L  K  D  V  V  N  A  D  V  L  Q  A  R  D  K  K  V  T  A  A  K  E  T  K  A  R  L  E  E  R  F  K  T  G  K  N  R  W  F  F  T  K  L  R  F  *  A  K  I  E  S  D  F  D  E  M  V  I  F  F  S  I  K  E  F  *  G  M  C  L  L  S  K  I  L  L  G  C  F  C  V  C  T  I  L  L  M  D  N  S  W  L  L  F  Q  L  P  T  V  L  *  W  L  V  S  N  V  *  V  A  *  Y  F  Y  I  P  E  S  M  F  C  Y  C  *  L  D  A  A  V  A  N  L  L  L  S  C   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0117B06.1" strand="+"/>
                <serials PGL_serial="2" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="15980" stop="16447"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>465</number_coding_nucleotides>
                  <number_encoded_amino_acids>155</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>HFIQPREIVCVCERDSEAARMVKFLKPNKAVILLQGKYAGRKAVIVRAFDEGTRDRPYGHCLVAGISKYPKKVIRKDSAKKQAKKSRVKAFIKLVNYNHIMPTRYTLDVDLKDVVNADVLQARDKKVTAAKETKARLEERFKTGKNRWFFTKLRF*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="15978" e_stop="16583"/>
            <exon e_start="20040" e_stop="20073"/>
            <exon e_start="21149" e_stop="21173"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.790" e_score="0.993"/>
          <exon-intron don_prob="0.984" acc_prob="0.000" e_score="0.676"/>
          <exon-only e_score="0.600"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.993">
            <gDNA_exon_boundary e_start="15978" e_stop="16583" e_length="606"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.790">
            <gDNA_intron_boundary i_start="16584" i_stop="20039" i_length="3456"/>
          </intron>
          <exon e_serial="2" e_score="0.676">
            <gDNA_exon_boundary e_start="20040" e_stop="20073" e_length="34"/>
          </exon>
          <intron i_serial="2" don_prob="0.984" acc_prob="0.000">
            <gDNA_intron_boundary i_start="20074" i_stop="21148" i_length="1075"/>
          </intron>
          <exon e_serial="3" e_score="0.600">
            <gDNA_exon_boundary e_start="21149" e_stop="21173" e_length="25"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15978" stop="16583"/>
              <exon start="20040" stop="20073"/>
              <exon start="21149" stop="21173"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U334628" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="3" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TCCATTTCATCCAGCCGAGAGAGATAGTGTGTGTGTGTGAGAGAGATTCAGAGGCGGCGAGGATGGTGAAGTTTTTGAAGCCAAACAAAGCTGTTATCCTTCTTCAAGGCAAGTATGCCGGCCGGAAAGCTGTGATCGTAAGGGCATTTGATGAAGGAACAAGGGACAGGCCATATGGCCATTGTTTGGTCGCAGGTATCTCCAAGTACCCGAAGAAGGTGATCCGCAAGGATTCAGCAAAGAAGCAGGCGAAGAAATCTCGTGTTAAGGCTTTCATCAAGCTCGTGAACTACAACCACATCATGCCTACTCGTTACACACTCGATGTGGATCTGAAGGATGTTGTCAATGCTGATGTTCTTCAGGCACGTGACAAGAAGGTGACCGCTGCAAAGGAGACCAAGGCTAGGCTTGAGGAGAGGTTCAAGACCGGGAAAAATCGCTGGTTCTTTACCAAGCTTAGGTTCTGAGCGAAGATTGAATCCGATTTTGATGAAATGGTAATTTTTTTTAGTATTAAAGAGTTTTGAGGAATGTGTTTGTTATCAAAGATACTATTAGGCTGTTTTTGTGTTTGCACTATTTTATTGATGGATAATTCCTGGC : GAAAAAAAGAAGAAGGAGAAGAAGAAGAAAAAGG : AAAAAAATTAAAAGACAAATTAAAA</gDNA_template>
            <first_frame> S  I  S  S  S  R  E  R  *  C  V  C  V  R  E  I  Q  R  R  R  G  W  *  S  F  *  S  Q  T  K  L  L  S  F  F  K  A  S  M  P  A  G  K  L  *  S  *  G  H  L  M  K  E  Q  G  T  G  H  M  A  I  V  W  S  Q  V  S  P  S  T  R  R  R  *  S  A  R  I  Q  Q  R  S  R  R  R  N  L  V  L  R  L  S  S  S  S  *  T  T  T  T  S  C  L  L  V  T  H  S  M  W  I  *  R  M  L  S  M  L  M  F  F  R  H  V  T  R  R  *  P  L  Q  R  R  P  R  L  G  L  R  R  G  S  R  P  G  K  I  A  G  S  L  P  S  L  G  S  E  R  R  L  N  P  I  L  M  K  W  *  F  F  L  V  L  K  S  F  E  E  C  V  C  Y  Q  R  Y  Y  *  A  V  F  V  F  A  L  F  Y  *  W  I  I  P  G  :  E  K  K  K  K  E  K  K  K  K  K   : E  K  N  *  K  T  N  *   </first_frame>
            <second_frame>  P  F  H  P  A  E  R  D  S  V  C  V  *  E  R  F  R  G  G  E  D  G  E  V  F  E  A  K  Q  S  C  Y  P  S  S  R  Q  V  C  R  P  E  S  C  D  R  K  G  I  *  *  R  N  K  G  Q  A  I  W  P  L  F  G  R  R  Y  L  Q  V  P  E  E  G  D  P  Q  G  F  S  K  E  A  G  E  E  I  S  C  *  G  F  H  Q  A  R  E  L  Q  P  H  H  A  Y  S  L  H  T  R  C  G  S  E  G  C  C  Q  C  *  C  S  S  G  T  *  Q  E  G  D  R  C  K  G  D  Q  G  *  A  *  G  E  V  Q  D  R  E  K  S  L  V  L  Y  Q  A  *  V  L  S  E  D  *  I  R  F  *  *  N  G  N  F  F  *  Y  *  R  V  L  R  N  V  F  V  I  K  D  T  I  R  L  F  L  C  L  H  Y  F  I  D  G  *  F  L  A :   K  K  R  R  R  R  R  R  R  K  R  :  K  K  I  K  R  Q  I  K  </second_frame>
            <third_frame>   H  F  I  Q  P  R  E  I  V  C  V  C  E  R  D  S  E  A  A  R  M  V  K  F  L  K  P  N  K  A  V  I  L  L  Q  G  K  Y  A  G  R  K  A  V  I  V  R  A  F  D  E  G  T  R  D  R  P  Y  G  H  C  L  V  A  G  I  S  K  Y  P  K  K  V  I  R  K  D  S  A  K  K  Q  A  K  K  S  R  V  K  A  F  I  K  L  V  N  Y  N  H  I  M  P  T  R  Y  T  L  D  V  D  L  K  D  V  V  N  A  D  V  L  Q  A  R  D  K  K  V  T  A  A  K  E  T  K  A  R  L  E  E  R  F  K  T  G  K  N  R  W  F  F  T  K  L  R  F  *  A  K  I  E  S  D  F  D  E  M  V  I  F  F  S  I  K  E  F  *  G  M  C  L  L  S  K  I  L  L  G  C  F  C  V  C  T  I  L  L  M  D  N  S  W   : R  K  K  E  E  G  E  E  E  E  K  G :   K  K  L  K  D  K  L  K </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0117B06.1" strand="+"/>
                <serials PGL_serial="2" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="15980" stop="16447"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>465</number_coding_nucleotides>
                  <number_encoded_amino_acids>155</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>HFIQPREIVCVCERDSEAARMVKFLKPNKAVILLQGKYAGRKAVIVRAFDEGTRDRPYGHCLVAGISKYPKKVIRKDSAKKQAKKSRVKAFIKLVNYNHIMPTRYTLDVDLKDVVNADVLQARDKKVTAAKETKARLEERFKTGKNRWFFTKLRF*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="4">
          <exon_coordinates>
            <exon e_start="12035" e_stop="12165"/>
            <exon e_start="13000" e_stop="13122"/>
            <exon e_start="13229" e_stop="13508"/>
            <exon e_start="18251" e_stop="18278"/>
            <exon e_start="20040" e_stop="20073"/>
            <exon e_start="22422" e_stop="22508"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="1.000" e_score="0.977"/>
          <exon-intron don_prob="1.000" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.990" acc_prob="0.790" e_score="0.679"/>
          <exon-intron don_prob="0.984" acc_prob="0.000" e_score="0.676"/>
          <exon-only e_score="0.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.977">
            <gDNA_exon_boundary e_start="12035" e_stop="12165" e_length="131"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="1.000">
            <gDNA_intron_boundary i_start="12166" i_stop="12999" i_length="834"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="13000" e_stop="13122" e_length="123"/>
          </exon>
          <intron i_serial="2" don_prob="1.000" acc_prob="0.995">
            <gDNA_intron_boundary i_start="13123" i_stop="13228" i_length="106"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="13229" e_stop="13508" e_length="280"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="13509" i_stop="18250" i_length="4742"/>
          </intron>
          <exon e_serial="4" e_score="0.679">
            <gDNA_exon_boundary e_start="18251" e_stop="18278" e_length="28"/>
          </exon>
          <intron i_serial="4" don_prob="0.990" acc_prob="0.790">
            <gDNA_intron_boundary i_start="18279" i_stop="20039" i_length="1761"/>
          </intron>
          <exon e_serial="5" e_score="0.676">
            <gDNA_exon_boundary e_start="20040" e_stop="20073" e_length="34"/>
          </exon>
          <intron i_serial="5" don_prob="0.984" acc_prob="0.000">
            <gDNA_intron_boundary i_start="20074" i_stop="22421" i_length="2348"/>
          </intron>
          <exon e_serial="6" e_score="0.000">
            <gDNA_exon_boundary e_start="22422" e_stop="22508" e_length="87"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="12035" stop="12165"/>
              <exon start="13000" stop="13122"/>
              <exon start="13229" stop="13508"/>
              <exon start="18251" stop="18278"/>
              <exon start="20040" stop="20073"/>
              <exon start="22422" stop="22508"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U333644" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="4" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATCTCATCGTTGGTGTTACCAAGGGATACAGATACAAGATGCGTTTTGTATATGCTCACTTTCCGATCAATGCCTCCATCACCGGAGGTAACAAGTCCATTGAGATCCGTAACTTCCTTGGCGAGAAAAAG : GTTAGGAAAGTTGACATGCTTGATGGAGTAACAGTTGTTCGATCTGAGAAGGTTAAGGACGAGCTTGTGTTGGATGGAAATGACATTGAGCTTGTTTCTCGCTCTGCTGCCCTCATTAACCAA : AAATGCCATGTGAAGAACAAGGATATCCGAAAGTTTCTTGATGGTATCTATGTCAGCGAGAAGGGTAAAATTGTCGAAGAAGAATGAGTATTTTAGAAGTAGGCATGTTGGTGATGGACCATATCCCAAATCCTCGTTTTACCATTTCTTTCAAGTTTTTTTGGAGACCATATATTACAGACTTGTTTGAATTTCAGTTTTCTAGTTCTTGTGTTGAAATTTTGTTGACAAAGTGGCCTTGGTGGTTCTTTCAATTACACCAAATGTTTCTGTTCTCGTT : AAAAACAAGGAAAAAACTACATAACTAA : GAAAAAAAGAAGAAGGAGAAGAAGAAGAAAAAGG : TGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN</gDNA_template>
            <first_frame> I  S  S  L  V  L  P  R  D  T  D  T  R  C  V  L  Y  M  L  T  F  R  S  M  P  P  S  P  E  V  T  S  P  L  R  S  V  T  S  L  A  R  K  R :   L  G  K  L  T  C  L  M  E  *  Q  L  F  D  L  R  R  L  R  T  S  L  C  W  M  E  M  T  L  S  L  F  L  A  L  L  P  S  L  T  K :   N  A  M  *  R  T  R  I  S  E  S  F  L  M  V  S  M  S  A  R  R  V  K  L  S  K  K  N  E  Y  F  R  S  R  H  V  G  D  G  P  Y  P  K  S  S  F  Y  H  F  F  Q  V  F  L  E  T  I  Y  Y  R  L  V  *  I  S  V  F  *  F  L  C  *  N  F  V  D  K  V  A  L  V  V  L  S  I  T  P  N  V  S  V  L  V  :  K  N  K  E  K  T  T  *  L   : R  K  K  E  E  G  E  E  E  E  K  G :   V  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F   </first_frame>
            <second_frame>  S  H  R  W  C  Y  Q  G  I  Q  I  Q  D  A  F  C  I  C  S  L  S  D  Q  C  L  H  H  R  R  *  Q  V  H  *  D  P  *  L  P  W  R  E  K   : G  *  E  S  *  H  A  *  W  S  N  S  C  S  I  *  E  G  *  G  R  A  C  V  G  W  K  *  H  *  A  C  F  S  L  C  C  P  H  *  P   : K  M  P  C  E  E  Q  G  Y  P  K  V  S  *  W  Y  L  C  Q  R  E  G  *  N  C  R  R  R  M  S  I  L  E  V  G  M  L  V  M  D  H  I  P  N  P  R  F  T  I  S  F  K  F  F  W  R  P  Y  I  T  D  L  F  E  F  Q  F  S  S  S  C  V  E  I  L  L  T  K  W  P  W  W  F  F  Q  L  H  Q  M  F  L  F  S  L :   K  T  R  K  K  L  H  N  *  :  E  K  K  K  K  E  K  K  K  K  K   : V  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  </second_frame>
            <third_frame>   L  I  V  G  V  T  K  G  Y  R  Y  K  M  R  F  V  Y  A  H  F  P  I  N  A  S  I  T  G  G  N  K  S  I  E  I  R  N  F  L  G  E  K  K  :  V  R  K  V  D  M  L  D  G  V  T  V  V  R  S  E  K  V  K  D  E  L  V  L  D  G  N  D  I  E  L  V  S  R  S  A  A  L  I  N  Q  :  K  C  H  V  K  N  K  D  I  R  K  F  L  D  G  I  Y  V  S  E  K  G  K  I  V  E  E  E  *  V  F  *  K  *  A  C  W  *  W  T  I  S  Q  I  L  V  L  P  F  L  S  S  F  F  G  D  H  I  L  Q  T  C  L  N  F  S  F  L  V  L  V  L  K  F  C  *  Q  S  G  L  G  G  S  F  N  Y  T  K  C  F  C  S  R   : *  K  Q  G  K  N  Y  I  T  K :   K  K  R  R  R  R  R  R  R  K  R  :  C  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0117B06.1" strand="+"/>
                <serials PGL_serial="2" AGS_serial="4" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="12037" stop="12165"/>
                    <exon start="13000" stop="13122"/>
                    <exon start="13229" stop="13315"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>336</number_coding_nucleotides>
                  <number_encoded_amino_acids>112</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LIVGVTKGYRYKMRFVYAHFPINASITGGNKSIEIRNFLGEKKVRKVDMLDGVTVVRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSEKGKIVEEE*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0117B06.1" strand="+"/>
                <serials PGL_serial="2" AGS_serial="4" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="13297" stop="13508"/>
                    <exon start="18251" stop="18278"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>237</number_coding_nucleotides>
                  <number_encoded_amino_acids>79</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NCRRRMSILEVGMLVMDHIPNPRFTISFKFFWRPYITDLFEFQFSSSCVEILLTKWPWWFFQLHQMFLFSLKTRKKLHN*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="-" PGL_start="20143" PGL_stop="19462"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="20143" e_stop="19462"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.999"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.999">
            <gDNA_exon_boundary e_start="20143" e_stop="19462" e_length="682"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20143" stop="19462"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U324917" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CAAAATGGCAACAAATTCATTCAACTCCATTCATACACTAAGAAGAAGGCATTCTATAGATTGTCCTTACCCTTTTTCTTCTTCTTCTCCTTCTTCTTTTTTTCCTAAGACAATTACCAAAAACCCCTCCTCATTCTCCAATCATAACCTCATAACTTTCTCTGTTTCCTCAACTACCCCTACCACCACCACCACCACCACCATCACCACCACCCCCTTCGATACTCTCGAACAACACTTAATTTCTCAAAATTTCCGGGAAGCAGACGAGGAAACTCGCCGTTTACTCATCGTTTTAGCCGGAGAAGCAGCGGTTAAACGAGGATACGTTTTCTTCTCCGAAGTTCAGTTCATTTCCGAATCTGACCTGAAGGAAATCGATTCGCTATGGAGGAAATACAGCGACGGAAAATTCGGTTACAGTGTTCAGAAGAAGATATGGAATAACAAAGCGAACAGAGATTTCACGAATTTCTTCATCAAAATTGGATGGATGAAGAAACTGGAGTCTGAAGAAGTGGATCAGCACAATTACAGGGCTTTTCCGAATGAATTTATTTGGGAATTGAACGATGAAACACCCGAGGGACACTTGCCATTAACGAATGCTCTGAGAGGAACTCAATTGCTGAAGAGCATTTTCACTCATCCAGCATTTGTTGAAGATGGAGATGAAGAAGAA</gDNA_template>
            <first_frame> Q  N  G  N  K  F  I  Q  L  H  S  Y  T  K  K  K  A  F  Y  R  L  S  L  P  F  F  F  F  F  S  F  F  F  F  S  *  D  N  Y  Q  K  P  L  L  I  L  Q  S  *  P  H  N  F  L  C  F  L  N  Y  P  Y  H  H  H  H  H  H  H  H  H  H  P  L  R  Y  S  R  T  T  L  N  F  S  K  F  P  G  S  R  R  G  N  S  P  F  T  H  R  F  S  R  R  S  S  G  *  T  R  I  R  F  L  L  R  S  S  V  H  F  R  I  *  P  E  G  N  R  F  A  M  E  E  I  Q  R  R  K  I  R  L  Q  C  S  E  E  D  M  E  *  Q  S  E  Q  R  F  H  E  F  L  H  Q  N  W  M  D  E  E  T  G  V  *  R  S  G  S  A  Q  L  Q  G  F  S  E  *  I  Y  L  G  I  E  R  *  N  T  R  G  T  L  A  I  N  E  C  S  E  R  N  S  I  A  E  E  H  F  H  S  S  S  I  C  *  R  W  R  *  R  R  </first_frame>
            <second_frame>  K  M  A  T  N  S  F  N  S  I  H  T  L  R  R  R  H  S  I  D  C  P  Y  P  F  S  S  S  S  P  S  S  F  F  P  K  T  I  T  K  N  P  S  S  F  S  N  H  N  L  I  T  F  S  V  S  S  T  T  P  T  T  T  T  T  T  T  I  T  T  T  P  F  D  T  L  E  Q  H  L  I  S  Q  N  F  R  E  A  D  E  E  T  R  R  L  L  I  V  L  A  G  E  A  A  V  K  R  G  Y  V  F  F  S  E  V  Q  F  I  S  E  S  D  L  K  E  I  D  S  L  W  R  K  Y  S  D  G  K  F  G  Y  S  V  Q  K  K  I  W  N  N  K  A  N  R  D  F  T  N  F  F  I  K  I  G  W  M  K  K  L  E  S  E  E  V  D  Q  H  N  Y  R  A  F  P  N  E  F  I  W  E  L  N  D  E  T  P  E  G  H  L  P  L  T  N  A  L  R  G  T  Q  L  L  K  S  I  F  T  H  P  A  F  V  E  D  G  D  E  E  E </second_frame>
            <third_frame>   K  W  Q  Q  I  H  S  T  P  F  I  H  *  E  E  G  I  L  *  I  V  L  T  L  F  L  L  L  L  L  L  L  F  F  L  R  Q  L  P  K  T  P  P  H  S  P  I  I  T  S  *  L  S  L  F  P  Q  L  P  L  P  P  P  P  P  P  P  S  P  P  P  P  S  I  L  S  N  N  T  *  F  L  K  I  S  G  K  Q  T  R  K  L  A  V  Y  S  S  F  *  P  E  K  Q  R  L  N  E  D  T  F  S  S  P  K  F  S  S  F  P  N  L  T  *  R  K  S  I  R  Y  G  G  N  T  A  T  E  N  S  V  T  V  F  R  R  R  Y  G  I  T  K  R  T  E  I  S  R  I  S  S  S  K  L  D  G  *  R  N  W  S  L  K  K  W  I  S  T  I  T  G  L  F  R  M  N  L  F  G  N  *  T  M  K  H  P  R  D  T  C  H  *  R  M  L  *  E  E  L  N  C  *  R  A  F  S  L  I  Q  H  L  L  K  M  E  M  K  K   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0117B06.1" strand="-"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="20142" stop="19462"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>681</number_coding_nucleotides>
                  <number_encoded_amino_acids>227</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KMATNSFNSIHTLRRRHSIDCPYPFSSSSPSSFFPKTITKNPSSFSNHNLITFSVSSTTPTTTTTTTITTTPFDTLEQHLISQNFREADEETRRLLIVLAGEAAVKRGYVFFSEVQFISESDLKEIDSLWRKYSDGKFGYSVQKKIWNNKANRDFTNFFIKIGWMKKLESEEVDQHNYRAFPNEFIWELNDETPEGHLPLTNALRGTQLLKSIFTHPAFVEDGDEEE</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="-" PGL_start="49218" PGL_stop="21434"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="49218" e_stop="49039"/>
            <exon e_start="48431" e_stop="48355"/>
            <exon e_start="47981" e_stop="47914"/>
            <exon e_start="47540" e_stop="47424"/>
            <exon e_start="47090" e_stop="47028"/>
            <exon e_start="46466" e_stop="46362"/>
            <exon e_start="46274" e_stop="46224"/>
            <exon e_start="45811" e_stop="45491"/>
            <exon e_start="22237" e_stop="22031"/>
            <exon e_start="21936" e_stop="21434"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.999" e_score="0.994"/>
          <exon-intron don_prob="0.795" acc_prob="0.669" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.210" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.992" acc_prob="0.944" e_score="1.000"/>
          <exon-intron don_prob="0.989" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.993" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.962" e_score="1.000"/>
          <exon-only e_score="0.986"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.994">
            <gDNA_exon_boundary e_start="49218" e_stop="49039" e_length="180"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.999">
            <gDNA_intron_boundary i_start="49038" i_stop="48432" i_length="607"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="48431" e_stop="48355" e_length="77"/>
          </exon>
          <intron i_serial="2" don_prob="0.795" acc_prob="0.669">
            <gDNA_intron_boundary i_start="48354" i_stop="47982" i_length="373"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="47981" e_stop="47914" e_length="68"/>
          </exon>
          <intron i_serial="3" don_prob="0.998" acc_prob="0.210">
            <gDNA_intron_boundary i_start="47913" i_stop="47541" i_length="373"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="47540" e_stop="47424" e_length="117"/>
          </exon>
          <intron i_serial="4" don_prob="1.000" acc_prob="0.996">
            <gDNA_intron_boundary i_start="47423" i_stop="47091" i_length="333"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="47090" e_stop="47028" e_length="63"/>
          </exon>
          <intron i_serial="5" don_prob="0.992" acc_prob="0.944">
            <gDNA_intron_boundary i_start="47027" i_stop="46467" i_length="561"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="46466" e_stop="46362" e_length="105"/>
          </exon>
          <intron i_serial="6" don_prob="0.989" acc_prob="0.994">
            <gDNA_intron_boundary i_start="46361" i_stop="46275" i_length="87"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="46274" e_stop="46224" e_length="51"/>
          </exon>
          <intron i_serial="7" don_prob="0.993" acc_prob="0.997">
            <gDNA_intron_boundary i_start="46223" i_stop="45812" i_length="412"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="45811" e_stop="45491" e_length="321"/>
          </exon>
          <intron i_serial="8" don_prob="1.000" acc_prob="0.992">
            <gDNA_intron_boundary i_start="45490" i_stop="22238" i_length="23253"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="22237" e_stop="22031" e_length="207"/>
          </exon>
          <intron i_serial="9" don_prob="0.997" acc_prob="0.962">
            <gDNA_intron_boundary i_start="22030" i_stop="21937" i_length="94"/>
          </intron>
          <exon e_serial="10" e_score="0.986">
            <gDNA_exon_boundary e_start="21936" e_stop="21434" e_length="503"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="49218" stop="49039"/>
              <exon start="48431" stop="48355"/>
              <exon start="47981" stop="47914"/>
              <exon start="47540" stop="47424"/>
              <exon start="47090" stop="47028"/>
              <exon start="46466" stop="46362"/>
              <exon start="46274" stop="46224"/>
              <exon start="45811" stop="45491"/>
              <exon start="22237" stop="22031"/>
              <exon start="21936" stop="21434"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U317448" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TACTTGCAAATTGCAAAAGGGGTGGAAGATTAGGGTTCTTTTAAAAGCAGCTTTTGGGTTCTGAGGGCTCTACTCCACTGAGCTACACAAGGAAAAAATGGCAGCTATTCAGCAAAGTCTTTCTACTTCAATCTCTTCATCAGCATCTACTTTTCTGGGTCAGAACAAACTCCGTTTCAG : GAATCAGAATGTGTCAATGCCAGGCAAAACCAGTGGTATTGTCAGATGTGTTGCAACACCCTCTACGGAGAAAACTT : CTTACAAGACACAGGTCTCCCGCAATGAAAACTTAGCGAAACTTCAAGCTGGTTATCTGTTTCCTGAG : ATCGCAAGAAGGAGATCTGCACACATGTTGAAACATCCTGATGCTCAAATTATAAGCCTTGGAATTGGTGACACTACCGAGCCCATTCCTGAAGTCATAACTTCTGCCATGGCAAAG : AGAGCACATGAACTGTCAACATTAAATGGTTACAGTGGTTATGGTGCTGAGCAAGGAGAAAAA : CAACTTAGAGCCTCCATTGCTTCTACCTATTATGCAAATGTTGGACTAGAAGAAAATGAGATCTTCGTTTCTGATGGTGCCAAAAGTGATATATCTCGACTTCAG : GTTCTTTTTGGATCTAATGTGAGTATGGCTGTGCAAGATCCATCATACCCG : GCTTATGTGGACTCGAGTGTTATTATGGGTCAAACTGGTCAGTTTCAGAAGGATGTGGAGAAGTATGGGAATATTGCATACATGAGATGTACTCCAGAAAATGGGTTCTTTCCTGATCTATCCAGTGTTCCTCGGACAGACATTATATTTTTCTGTTCGCCTAATAATCCAACTGGTTCGGCGGCATCTAGGGAGCAGCTGACTAAATTGGTGCAATTTGCTAAAGATAATGGCTCGATCCTTGTTTATGATTCTGCATATGCTATGTATATATGTGATGACAGTCCAAAGTCCATCTTTGAGATTCCTGGAGCCAAAGAG : GTTGCCATTGAGGTTTCATCATTTTCGAAGTATGCTGGGTTCACTGGTGTTCGTTTAGGGTGGACTGCCATTCCCAAAGCACTCCTATATTCTGATGGATTTCCTGTAGCAAAAGACTTCAATCGCATTGTTTGTACAAGCTTCAATGGTGCATCCAACATTGCTCAAGCTGGTGGTCTGGCTTGCCTTTCACCTGATGGTTTCAAG : GCCATGATGGACGTGGTTGGTTACTATAAAGAGAACACACAAATCATAATGGACACATTTAACTCGCTAGGTTACAAGGTGTATGGAGGTAAAAATGCACCCTACGTCTGGGTACACTTCCCTGGACGAAGCTCATGGGAGGTTTTCAGCGAGATACTTGAGAAGACTCATGTCGTTACTACTCCAGGCAGTGGTTTCGGGCCTGGTGGTGAAGGTTTTGTGAGAGTGAGTGCTTTTGGGCACAGGGAAAACGTCATTGAAGCTTGCAGAAGATTCAAGGAATTGTACAAGTAAAGTAACTCGTTCGCCTGCATATCTATGTGAAAAGATGCAGCAGGCTGCACTTCTGGCATTCATTGAGATGATGTTTCTTGACTACTCGTTAACATTTTGATCATCCTGTATGGAATCTGTTGCTCTGGAAGAATAAAGCTTATTCTATGATTGCCACTATCAATTTTTCCATATTAAATAGTAATATGAAGTTTGAAACCTTCCTTTTA</gDNA_template>
            <first_frame> Y  L  Q  I  A  K  G  V  E  D  *  G  S  F  K  S  S  F  W  V  L  R  A  L  L  H  *  A  T  Q  G  K  N  G  S  Y  S  A  K  S  F  Y  F  N  L  F  I  S  I  Y  F  S  G  S  E  Q  T  P  F  Q  :  E  S  E  C  V  N  A  R  Q  N  Q  W  Y  C  Q  M  C  C  N  T  L  Y  G  E  N  F :   L  Q  D  T  G  L  P  Q  *  K  L  S  E  T  S  S  W  L  S  V  S  *   : D  R  K  K  E  I  C  T  H  V  E  T  S  *  C  S  N  Y  K  P  W  N  W  *  H  Y  R  A  H  S  *  S  H  N  F  C  H  G  K   : E  S  T  *  T  V  N  I  K  W  L  Q  W  L  W  C  *  A  R  R  K   : T  T  *  S  L  H  C  F  Y  L  L  C  K  C  W  T  R  R  K  *  D  L  R  F  *  W  C  Q  K  *  Y  I  S  T  S   : G  S  F  W  I  *  C  E  Y  G  C  A  R  S  I  I  P   : G  L  C  G  L  E  C  Y  Y  G  S  N  W  S  V  S  E  G  C  G  E  V  W  E  Y  C  I  H  E  M  Y  S  R  K  W  V  L  S  *  S  I  Q  C  S  S  D  R  H  Y  I  F  L  F  A  *  *  S  N  W  F  G  G  I  *  G  A  A  D  *  I  G  A  I  C  *  R  *  W  L  D  P  C  L  *  F  C  I  C  Y  V  Y  M  *  *  Q  S  K  V  H  L  *  D  S  W  S  Q  R   : G  C  H  *  G  F  I  I  F  E  V  C  W  V  H  W  C  S  F  R  V  D  C  H  S  Q  S  T  P  I  F  *  W  I  S  C  S  K  R  L  Q  S  H  C  L  Y  K  L  Q  W  C  I  Q  H  C  S  S  W  W  S  G  L  P  F  T  *  W  F  Q   : G  H  D  G  R  G  W  L  L  *  R  E  H  T  N  H  N  G  H  I  *  L  A  R  L  Q  G  V  W  R  *  K  C  T  L  R  L  G  T  L  P  W  T  K  L  M  G  G  F  Q  R  D  T  *  E  D  S  C  R  Y  Y  S  R  Q  W  F  R  A  W  W  *  R  F  C  E  S  E  C  F  W  A  Q  G  K  R  H  *  S  L  Q  K  I  Q  G  I  V  Q  V  K  *  L  V  R  L  H  I  Y  V  K  R  C  S  R  L  H  F  W  H  S  L  R  *  C  F  L  T  T  R  *  H  F  D  H  P  V  W  N  L  L  L  W  K  N  K  A  Y  S  M  I  A  T  I  N  F  S  I  L  N  S  N  M  K  F  E  T  F  L  L </first_frame>
            <second_frame>  T  C  K  L  Q  K  G  W  K  I  R  V  L  L  K  A  A  F  G  F  *  G  L  Y  S  T  E  L  H  K  E  K  M  A  A  I  Q  Q  S  L  S  T  S  I  S  S  S  A  S  T  F  L  G  Q  N  K  L  R  F  R :   N  Q  N  V  S  M  P  G  K  T  S  G  I  V  R  C  V  A  T  P  S  T  E  K  T   : S  Y  K  T  Q  V  S  R  N  E  N  L  A  K  L  Q  A  G  Y  L  F  P  E  :  I  A  R  R  R  S  A  H  M  L  K  H  P  D  A  Q  I  I  S  L  G  I  G  D  T  T  E  P  I  P  E  V  I  T  S  A  M  A  K  :  R  A  H  E  L  S  T  L  N  G  Y  S  G  Y  G  A  E  Q  G  E  K  :  Q  L  R  A  S  I  A  S  T  Y  Y  A  N  V  G  L  E  E  N  E  I  F  V  S  D  G  A  K  S  D  I  S  R  L  Q  :  V  L  F  G  S  N  V  S  M  A  V  Q  D  P  S  Y  P  :  A  Y  V  D  S  S  V  I  M  G  Q  T  G  Q  F  Q  K  D  V  E  K  Y  G  N  I  A  Y  M  R  C  T  P  E  N  G  F  F  P  D  L  S  S  V  P  R  T  D  I  I  F  F  C  S  P  N  N  P  T  G  S  A  A  S  R  E  Q  L  T  K  L  V  Q  F  A  K  D  N  G  S  I  L  V  Y  D  S  A  Y  A  M  Y  I  C  D  D  S  P  K  S  I  F  E  I  P  G  A  K  E  :  V  A  I  E  V  S  S  F  S  K  Y  A  G  F  T  G  V  R  L  G  W  T  A  I  P  K  A  L  L  Y  S  D  G  F  P  V  A  K  D  F  N  R  I  V  C  T  S  F  N  G  A  S  N  I  A  Q  A  G  G  L  A  C  L  S  P  D  G  F  K  :  A  M  M  D  V  V  G  Y  Y  K  E  N  T  Q  I  I  M  D  T  F  N  S  L  G  Y  K  V  Y  G  G  K  N  A  P  Y  V  W  V  H  F  P  G  R  S  S  W  E  V  F  S  E  I  L  E  K  T  H  V  V  T  T  P  G  S  G  F  G  P  G  G  E  G  F  V  R  V  S  A  F  G  H  R  E  N  V  I  E  A  C  R  R  F  K  E  L  Y  K  *  S  N  S  F  A  C  I  S  M  *  K  D  A  A  G  C  T  S  G  I  H  *  D  D  V  S  *  L  L  V  N  I  L  I  I  L  Y  G  I  C  C  S  G  R  I  K  L  I  L  *  L  P  L  S  I  F  P  Y  *  I  V  I  *  S  L  K  P  S  F   </second_frame>
            <third_frame>   L  A  N  C  K  R  G  G  R  L  G  F  F  *  K  Q  L  L  G  S  E  G  S  T  P  L  S  Y  T  R  K  K  W  Q  L  F  S  K  V  F  L  L  Q  S  L  H  Q  H  L  L  F  W  V  R  T  N  S  V  S   : G  I  R  M  C  Q  C  Q  A  K  P  V  V  L  S  D  V  L  Q  H  P  L  R  R  K  L  :  L  T  R  H  R  S  P  A  M  K  T  *  R  N  F  K  L  V  I  C  F  L  R :   S  Q  E  G  D  L  H  T  C  *  N  I  L  M  L  K  L  *  A  L  E  L  V  T  L  P  S  P  F  L  K  S  *  L  L  P  W  Q  R :   E  H  M  N  C  Q  H  *  M  V  T  V  V  M  V  L  S  K  E  K  N :   N  L  E  P  P  L  L  L  P  I  M  Q  M  L  D  *  K  K  M  R  S  S  F  L  M  V  P  K  V  I  Y  L  D  F  R :   F  F  L  D  L  M  *  V  W  L  C  K  I  H  H  T  R :   L  M  W  T  R  V  L  L  W  V  K  L  V  S  F  R  R  M  W  R  S  M  G  I  L  H  T  *  D  V  L  Q  K  M  G  S  F  L  I  Y  P  V  F  L  G  Q  T  L  Y  F  S  V  R  L  I  I  Q  L  V  R  R  H  L  G  S  S  *  L  N  W  C  N  L  L  K  I  M  A  R  S  L  F  M  I  L  H  M  L  C  I  Y  V  M  T  V  Q  S  P  S  L  R  F  L  E  P  K  R :   L  P  L  R  F  H  H  F  R  S  M  L  G  S  L  V  F  V  *  G  G  L  P  F  P  K  H  S  Y  I  L  M  D  F  L  *  Q  K  T  S  I  A  L  F  V  Q  A  S  M  V  H  P  T  L  L  K  L  V  V  W  L  A  F  H  L  M  V  S  R :   P  *  W  T  W  L  V  T  I  K  R  T  H  K  S  *  W  T  H  L  T  R  *  V  T  R  C  M  E  V  K  M  H  P  T  S  G  Y  T  S  L  D  E  A  H  G  R  F  S  A  R  Y  L  R  R  L  M  S  L  L  L  Q  A  V  V  S  G  L  V  V  K  V  L  *  E  *  V  L  L  G  T  G  K  T  S  L  K  L  A  E  D  S  R  N  C  T  S  K  V  T  R  S  P  A  Y  L  C  E  K  M  Q  Q  A  A  L  L  A  F  I  E  M  M  F  L  D  Y  S  L  T  F  *  S  S  C  M  E  S  V  A  L  E  E  *  S  L  F  Y  D  C  H  Y  Q  F  F  H  I  K  *  *  Y  E  V  *  N  L  P  F  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0117B06.1" strand="-"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="49154" stop="49039"/>
                    <exon start="48431" stop="48355"/>
                    <exon start="47981" stop="47914"/>
                    <exon start="47540" stop="47424"/>
                    <exon start="47090" stop="47028"/>
                    <exon start="46466" stop="46362"/>
                    <exon start="46274" stop="46224"/>
                    <exon start="45811" stop="45491"/>
                    <exon start="22237" stop="22031"/>
                    <exon start="21936" stop="21643"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1416</number_coding_nucleotides>
                  <number_encoded_amino_acids>472</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GLYSTELHKEKMAAIQQSLSTSISSSASTFLGQNKLRFRNQNVSMPGKTSGIVRCVATPSTEKTSYKTQVSRNENLAKLQAGYLFPEIARRRSAHMLKHPDAQIISLGIGDTTEPIPEVITSAMAKRAHELSTLNGYSGYGAEQGEKQLRASIASTYYANVGLEENEIFVSDGAKSDISRLQVLFGSNVSMAVQDPSYPAYVDSSVIMGQTGQFQKDVEKYGNIAYMRCTPENGFFPDLSSVPRTDIIFFCSPNNPTGSAASREQLTKLVQFAKDNGSILVYDSAYAMYICDDSPKSIFEIPGAKEVAIEVSSFSKYAGFTGVRLGWTAIPKALLYSDGFPVAKDFNRIVCTSFNGASNIAQAGGLACLSPDGFKAMMDVVGYYKENTQIIMDTFNSLGYKVYGGKNAPYVWVHFPGRSSWEVFSEILEKTHVVTTPGSGFGPGGEGFVRVSAFGHRENVIEACRRFKELYK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="30029" e_stop="30018"/>
            <exon e_start="29289" e_stop="28599"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.917"/>
          <exon-only e_score="0.993"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.917">
            <gDNA_exon_boundary e_start="30029" e_stop="30018" e_length="12"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="30017" i_stop="29290" i_length="728"/>
          </intron>
          <exon e_serial="2" e_score="0.993">
            <gDNA_exon_boundary e_start="29289" e_stop="28599" e_length="691"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30029" stop="30018"/>
              <exon start="29289" stop="28599"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U334623" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTTTTCTTTTTT : TATCTTAAGCAGAACAATACTTTTTCTACTTACTGAACATATCTGTTGACAGTATGAGAGCACTGATTAAGTACTACACACAAGCACACATGCACATTTAATTGGAAACTTCTTGAAGTTGGAGTTCAACCAAGATCGGGGACAGTAAAATACTCATCATCATCTGGGATTTCAATTCTGGACTTCTTGTAAGGCATTTGATATTTGGTTGTCCTGTAAATATTTGTATTGCTCGACTGAGGTACTGATAGCTCGGGCACTTCAGCTGCTGTTTGTTCACCAAAGAGATCAATGCCCCCTAACCACTCAAATTCACCAAGCTCAAGTAGATCCTTCTGTATTAGATTGAAACAACCAATATATAGGTTATTCATTACATATTAGATGAACAGACAATGACACCGTAATATACTGAATCAATGGTCACCACAGTTTCACATATTAGACTGACACCGGAATATACCCAAGGCCAACTTCGTATATACATGTAATGGTGTCATAAAATGTCTCCCTATGTATCGAGGAATCTAAGGAAGTCGTTTTGCATATTTGAGTGTTTCAAATTCAAGTTCAATGCTATGCATAAGCTGCATTACCAAGAAAATCGATAGCTTCTCATCTAGAGAAGTCCTCTATACGTCAATCCGCCAGCCACCAACCCAAGTGGTAGAAAATATAGGATACTTGCAAA</gDNA_template>
            <first_frame> F  F  F  F  :  Y  L  K  Q  N  N  T  F  S  T  Y  *  T  Y  L  L  T  V  *  E  H  *  L  S  T  T  H  K  H  T  C  T  F  N  W  K  L  L  E  V  G  V  Q  P  R  S  G  T  V  K  Y  S  S  S  S  G  I  S  I  L  D  F  L  *  G  I  *  Y  L  V  V  L  *  I  F  V  L  L  D  *  G  T  D  S  S  G  T  S  A  A  V  C  S  P  K  R  S  M  P  P  N  H  S  N  S  P  S  S  S  R  S  F  C  I  R  L  K  Q  P  I  Y  R  L  F  I  T  Y  *  M  N  R  Q  *  H  R  N  I  L  N  Q  W  S  P  Q  F  H  I  L  D  *  H  R  N  I  P  K  A  N  F  V  Y  T  C  N  G  V  I  K  C  L  P  M  Y  R  G  I  *  G  S  R  F  A  Y  L  S  V  S  N  S  S  S  M  L  C  I  S  C  I  T  K  K  I  D  S  F  S  S  R  E  V  L  Y  T  S  I  R  Q  P  P  T  Q  V  V  E  N  I  G  Y  L  Q  </first_frame>
            <second_frame>  F  S  F  F :   I  L  S  R  T  I  L  F  L  L  T  E  H  I  C  *  Q  Y  E  S  T  D  *  V  L  H  T  S  T  H  A  H  L  I  G  N  F  L  K  L  E  F  N  Q  D  R  G  Q  *  N  T  H  H  H  L  G  F  Q  F  W  T  S  C  K  A  F  D  I  W  L  S  C  K  Y  L  Y  C  S  T  E  V  L  I  A  R  A  L  Q  L  L  F  V  H  Q  R  D  Q  C  P  L  T  T  Q  I  H  Q  A  Q  V  D  P  S  V  L  D  *  N  N  Q  Y  I  G  Y  S  L  H  I  R  *  T  D  N  D  T  V  I  Y  *  I  N  G  H  H  S  F  T  Y  *  T  D  T  G  I  Y  P  R  P  T  S  Y  I  H  V  M  V  S  *  N  V  S  L  C  I  E  E  S  K  E  V  V  L  H  I  *  V  F  Q  I  Q  V  Q  C  Y  A  *  A  A  L  P  R  K  S  I  A  S  H  L  E  K  S  S  I  R  Q  S  A  S  H  Q  P  K  W  *  K  I  *  D  T  C  K </second_frame>
            <third_frame>   F  L  F   : L  S  *  A  E  Q  Y  F  F  Y  L  L  N  I  S  V  D  S  M  R  A  L  I  K  Y  Y  T  Q  A  H  M  H  I  *  L  E  T  S  *  S  W  S  S  T  K  I  G  D  S  K  I  L  I  I  I  W  D  F  N  S  G  L  L  V  R  H  L  I  F  G  C  P  V  N  I  C  I  A  R  L  R  Y  *  *  L  G  H  F  S  C  C  L  F  T  K  E  I  N  A  P  *  P  L  K  F  T  K  L  K  *  I  L  L  Y  *  I  E  T  T  N  I  *  V  I  H  Y  I  L  D  E  Q  T  M  T  P  *  Y  T  E  S  M  V  T  T  V  S  H  I  R  L  T  P  E  Y  T  Q  G  Q  L  R  I  Y  M  *  W  C  H  K  M  S  P  Y  V  S  R  N  L  R  K  S  F  C  I  F  E  C  F  K  F  K  F  N  A  M  H  K  L  H  Y  Q  E  N  R  *  L  L  I  *  R  S  P  L  Y  V  N  P  P  A  T  N  P  S  G  R  K  Y  R  I  L  A   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0117B06.1" strand="-"/>
                <serials PGL_serial="4" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="29141" stop="28941"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>198</number_coding_nucleotides>
                  <number_encoded_amino_acids>66</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NTHHHLGFQFWTSCKAFDIWLSCKYLYCSTEVLIARALQLLFVHQRDQCPLTTQIHQAQVDPSVLD*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="32463" e_stop="31942"/>
            <exon e_start="31014" e_stop="30682"/>
            <exon e_start="30378" e_stop="30262"/>
            <exon e_start="30177" e_stop="29752"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.976" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.996" e_score="1.000"/>
          <exon-only e_score="0.967"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="32463" e_stop="31942" e_length="522"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.976">
            <gDNA_intron_boundary i_start="31941" i_stop="31015" i_length="927"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="31014" e_stop="30682" e_length="333"/>
          </exon>
          <intron i_serial="2" don_prob="0.998" acc_prob="0.997">
            <gDNA_intron_boundary i_start="30681" i_stop="30379" i_length="303"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="30378" e_stop="30262" e_length="117"/>
          </exon>
          <intron i_serial="3" don_prob="1.000" acc_prob="0.996">
            <gDNA_intron_boundary i_start="30261" i_stop="30178" i_length="84"/>
          </intron>
          <exon e_serial="4" e_score="0.967">
            <gDNA_exon_boundary e_start="30177" e_stop="29752" e_length="426"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32463" stop="31942"/>
              <exon start="31014" stop="30682"/>
              <exon start="30378" stop="30262"/>
              <exon start="30177" stop="29752"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U313491" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="3" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTCTATATAAAGCTCCTTATAATTTTCACTTATCCTCCTCTTCTTCTCTCTGTTATACTATATAAAAATCTATAGATACACCTATAGATACATATATTTTCTCTATTCATCGTAGCCATGGCAGTTAACGGTGCTTCTTCTTCTGGTTTGATCGTCAGTTTCGGTGAGATGTTGATCGATTTCGTTCCGACAGTCTCCGGCGTATCCCTTGCCGAGGCTCCCGGATTTTTGAAAGCTCCCGGCGGTGCACCGGCGAACGTCGCTATCGCGGTGACGAGGCTCGGAGGGAAGTCGGCGTTCGTCGGGAAACTCGGCGACGATGAGTTCGGTCACATGCTCGCCGGGATTCTGAAAACGAACGGCGTACAAGCCGAAGGAATTAATTTTGACAAGGGCGCCAGGACGGCTTTGGCGTTCGTGACGCTACGCGCCGACGGAGAGCGTGAGTTTATGTTTTACAGAAATCCCAGTGCCGATATGTTGCTCACGCCCGCTGAGTTGAATCTTGATCTTATTAGATCT : GCTAAGGTGTTCCACTATGGATCAATTAGTTTGATCGTGGAGCCATGTAGAGCAGCACATATGAAGGCAATGGAAGTAGCAAAGGAGGCAGGGGCATTGCTCTCTTATGACCCAAACCTTCGTTTGCCGTTGTGGCCTTCAGCAGAAGAGGCCAAGAAGCAAATCAAGAGCATATGGGACTCTGCTGATGTGATCAAGGTCAGCGATGTGGAGCTCGAATTCCTCACTGGAAGCAACAAGATTGATGATGAATCCGCCATGTCCTTGTGGCATCCTAACTTGAAGCTACTCTTGGTCACTCTTGGTGAAAAGGGTTGCAATTACTACACCAAG : AAATTCCATGGAACCGTTGGAGGATTCCATGTGAAGACTGTTGACACCACTGGAGCTGGTGATTCTTTTGTTGGTGCCCTTCTAACCAAGATTGTTGATGATCAAACCATTCTCGAG : GATGAAGCAAGGTTGAAGGAAGTACTTAGGTTTTCATGTGCATGTGGAGCCATCACTACAACCAAGAAAGGAGCAATCCCAGCTTTGCCTACTGCATCTGAAGCCCTCACTTTGCTCAAGGGAGGAGCATAGAAACATCGTGTTATCTTTTTTCTTTTTTCCATCTTCATATATTTCCCCCCCTTTATGAGTTTTTTTGAAGCTAGTAGGAAGCCTTTTCAGTTTTGGATTTTAATGTTTTGTTGTGATGAATGTCCATCAAGACACTTAATAAACTAAGCTTTCTTCATATGCAGCTTCCTTGTAACTTCTCCTTTACATCATCATACTAGTATTTCATTATCCAATTCTATATTCTAGTAGACATAGTTTTCACCTATTTCATTTGTCATCAAATCCTAGTAAAGTTGGGAATTTTGCCCAAGA</gDNA_template>
            <first_frame> F  Y  I  K  L  L  I  I  F  T  Y  P  P  L  L  L  S  V  I  L  Y  K  N  L  *  I  H  L  *  I  H  I  F  S  L  F  I  V  A  M  A  V  N  G  A  S  S  S  G  L  I  V  S  F  G  E  M  L  I  D  F  V  P  T  V  S  G  V  S  L  A  E  A  P  G  F  L  K  A  P  G  G  A  P  A  N  V  A  I  A  V  T  R  L  G  G  K  S  A  F  V  G  K  L  G  D  D  E  F  G  H  M  L  A  G  I  L  K  T  N  G  V  Q  A  E  G  I  N  F  D  K  G  A  R  T  A  L  A  F  V  T  L  R  A  D  G  E  R  E  F  M  F  Y  R  N  P  S  A  D  M  L  L  T  P  A  E  L  N  L  D  L  I  R  S  :  A  K  V  F  H  Y  G  S  I  S  L  I  V  E  P  C  R  A  A  H  M  K  A  M  E  V  A  K  E  A  G  A  L  L  S  Y  D  P  N  L  R  L  P  L  W  P  S  A  E  E  A  K  K  Q  I  K  S  I  W  D  S  A  D  V  I  K  V  S  D  V  E  L  E  F  L  T  G  S  N  K  I  D  D  E  S  A  M  S  L  W  H  P  N  L  K  L  L  L  V  T  L  G  E  K  G  C  N  Y  Y  T  K  :  K  F  H  G  T  V  G  G  F  H  V  K  T  V  D  T  T  G  A  G  D  S  F  V  G  A  L  L  T  K  I  V  D  D  Q  T  I  L  E  :  D  E  A  R  L  K  E  V  L  R  F  S  C  A  C  G  A  I  T  T  T  K  K  G  A  I  P  A  L  P  T  A  S  E  A  L  T  L  L  K  G  G  A  *  K  H  R  V  I  F  F  L  F  S  I  F  I  Y  F  P  P  F  M  S  F  F  E  A  S  R  K  P  F  Q  F  W  I  L  M  F  C  C  D  E  C  P  S  R  H  L  I  N  *  A  F  F  I  C  S  F  L  V  T  S  P  L  H  H  H  T  S  I  S  L  S  N  S  I  F  *  *  T  *  F  S  P  I  S  F  V  I  K  S  *  *  S  W  E  F  C  P  R </first_frame>
            <second_frame>  S  I  *  S  S  L  *  F  S  L  I  L  L  F  F  S  L  L  Y  Y  I  K  I  Y  R  Y  T  Y  R  Y  I  Y  F  L  Y  S  S  *  P  W  Q  L  T  V  L  L  L  L  V  *  S  S  V  S  V  R  C  *  S  I  S  F  R  Q  S  P  A  Y  P  L  P  R  L  P  D  F  *  K  L  P  A  V  H  R  R  T  S  L  S  R  *  R  G  S  E  G  S  R  R  S  S  G  N  S  A  T  M  S  S  V  T  C  S  P  G  F  *  K  R  T  A  Y  K  P  K  E  L  I  L  T  R  A  P  G  R  L  W  R  S  *  R  Y  A  P  T  E  S  V  S  L  C  F  T  E  I  P  V  P  I  C  C  S  R  P  L  S  *  I  L  I  L  L  D  L :   L  R  C  S  T  M  D  Q  L  V  *  S  W  S  H  V  E  Q  H  I  *  R  Q  W  K  *  Q  R  R  Q  G  H  C  S  L  M  T  Q  T  F  V  C  R  C  G  L  Q  Q  K  R  P  R  S  K  S  R  A  Y  G  T  L  L  M  *  S  R  S  A  M  W  S  S  N  S  S  L  E  A  T  R  L  M  M  N  P  P  C  P  C  G  I  L  T  *  S  Y  S  W  S  L  L  V  K  R  V  A  I  T  T  P  R :   N  S  M  E  P  L  E  D  S  M  *  R  L  L  T  P  L  E  L  V  I  L  L  L  V  P  F  *  P  R  L  L  M  I  K  P  F  S  R :   M  K  Q  G  *  R  K  Y  L  G  F  H  V  H  V  E  P  S  L  Q  P  R  K  E  Q  S  Q  L  C  L  L  H  L  K  P  S  L  C  S  R  E  E  H  R  N  I  V  L  S  F  F  F  F  P  S  S  Y  I  S  P  P  L  *  V  F  L  K  L  V  G  S  L  F  S  F  G  F  *  C  F  V  V  M  N  V  H  Q  D  T  *  *  T  K  L  S  S  Y  A  A  S  L  *  L  L  L  Y  I  I  I  L  V  F  H  Y  P  I  L  Y  S  S  R  H  S  F  H  L  F  H  L  S  S  N  P  S  K  V  G  N  F  A  Q   </second_frame>
            <third_frame>   L  Y  K  A  P  Y  N  F  H  L  S  S  S  S  S  L  C  Y  T  I  *  K  S  I  D  T  P  I  D  T  Y  I  F  S  I  H  R  S  H  G  S  *  R  C  F  F  F  W  F  D  R  Q  F  R  *  D  V  D  R  F  R  S  D  S  L  R  R  I  P  C  R  G  S  R  I  F  E  S  S  R  R  C  T  G  E  R  R  Y  R  G  D  E  A  R  R  E  V  G  V  R  R  E  T  R  R  R  *  V  R  S  H  A  R  R  D  S  E  N  E  R  R  T  S  R  R  N  *  F  *  Q  G  R  Q  D  G  F  G  V  R  D  A  T  R  R  R  R  A  *  V  Y  V  L  Q  K  S  Q  C  R  Y  V  A  H  A  R  *  V  E  S  *  S  Y  *  I   : C  *  G  V  P  L  W  I  N  *  F  D  R  G  A  M  *  S  S  T  Y  E  G  N  G  S  S  K  G  G  R  G  I  A  L  L  *  P  K  P  S  F  A  V  V  A  F  S  R  R  G  Q  E  A  N  Q  E  H  M  G  L  C  *  C  D  Q  G  Q  R  C  G  A  R  I  P  H  W  K  Q  Q  D  *  *  *  I  R  H  V  L  V  A  S  *  L  E  A  T  L  G  H  S  W  *  K  G  L  Q  L  L  H  Q   : E  I  P  W  N  R  W  R  I  P  C  E  D  C  *  H  H  W  S  W  *  F  F  C  W  C  P  S  N  Q  D  C  *  *  S  N  H  S  R   : G  *  S  K  V  E  G  S  T  *  V  F  M  C  M  W  S  H  H  Y  N  Q  E  R  S  N  P  S  F  A  Y  C  I  *  S  P  H  F  A  Q  G  R  S  I  E  T  S  C  Y  L  F  S  F  F  H  L  H  I  F  P  P  L  Y  E  F  F  *  S  *  *  E  A  F  S  V  L  D  F  N  V  L  L  *  *  M  S  I  K  T  L  N  K  L  S  F  L  H  M  Q  L  P  C  N  F  S  F  T  S  S  Y  *  Y  F  I  I  Q  F  Y  I  L  V  D  I  V  F  T  Y  F  I  C  H  Q  I  L  V  K  L  G  I  L  P  K  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0117B06.1" strand="-"/>
                <serials PGL_serial="4" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="32376" stop="31942"/>
                    <exon start="31014" stop="30682"/>
                    <exon start="30378" stop="30262"/>
                    <exon start="30177" stop="30046"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1014</number_coding_nucleotides>
                  <number_encoded_amino_acids>338</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IHIFSLFIVAMAVNGASSSGLIVSFGEMLIDFVPTVSGVSLAEAPGFLKAPGGAPANVAIAVTRLGGKSAFVGKLGDDEFGHMLAGILKTNGVQAEGINFDKGARTALAFVTLRADGEREFMFYRNPSADMLLTPAELNLDLIRSAKVFHYGSISLIVEPCRAAHMKAMEVAKEAGALLSYDPNLRLPLWPSAEEAKKQIKSIWDSADVIKVSDVELEFLTGSNKIDDESAMSLWHPNLKLLLVTLGEKGCNYYTKKFHGTVGGFHVKTVDTTGAGDSFVGALLTKIVDDQTILEDEARLKEVLRFSCACGAITTTKKGAIPALPTASEALTLLKGGA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="4">
          <exon_coordinates>
            <exon e_start="48381" e_stop="48355"/>
            <exon e_start="47981" e_stop="47914"/>
            <exon e_start="47540" e_stop="47424"/>
            <exon e_start="47090" e_stop="46753"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.795" acc_prob="0.669" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.210" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.996" e_score="1.000"/>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="48381" e_stop="48355" e_length="27"/>
          </exon>
          <intron i_serial="1" don_prob="0.795" acc_prob="0.669">
            <gDNA_intron_boundary i_start="48354" i_stop="47982" i_length="373"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="47981" e_stop="47914" e_length="68"/>
          </exon>
          <intron i_serial="2" don_prob="0.998" acc_prob="0.210">
            <gDNA_intron_boundary i_start="47913" i_stop="47541" i_length="373"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="47540" e_stop="47424" e_length="117"/>
          </exon>
          <intron i_serial="3" don_prob="1.000" acc_prob="0.996">
            <gDNA_intron_boundary i_start="47423" i_stop="47091" i_length="333"/>
          </intron>
          <exon e_serial="4" e_score="0.997">
            <gDNA_exon_boundary e_start="47090" e_stop="46753" e_length="338"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="48381" stop="48355"/>
              <exon start="47981" stop="47914"/>
              <exon start="47540" stop="47424"/>
              <exon start="47090" stop="46753"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U336130" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="4" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTGCAACACCCTCTACGGAGAAAACTT : CTTACAAGACACAGGTCTCCCGCAATGAAAACTTAGCGAAACTTCAAGCTGGTTATCTGTTTCCTGAG : ATCGCAAGAAGGAGATCTGCACACATGTTGAAACATCCTGATGCTCAAATTATAAGCCTTGGAATTGGTGACACTACCGAGCCCATTCCTGAAGTCATAACTTCTGCCATGGCAAAG : AGAGCACATGAACTGTCAACATTAAATGGTTACAGTGGTTATGGTGCTGAGCAAGGAGAAAAAGTAAGTAGTGCCCCCTCTCGTCATATTTCAGTAATATGATATTAGCTCTACTATTTATTGTCCAATCCTTGTTTCTCTTCCTTCTTTTGCTACAATAATAATGGTTCTGGCCTTCACTGATAGTTTGTCTTTCCTCGTTTTGTACCAATTTGATTGTTCATTTGTCCTTTTCTTTCCTCAAATACATTGCAATATTCTTTATTCAGGTATCCACTCAATAAAGTTAAAAAACTTCCTCTTCTATTCATAACGTCATTAAGGGATGTGCAGATGTG</gDNA_template>
            <first_frame> L  Q  H  P  L  R  R  K  L  :  L  T  R  H  R  S  P  A  M  K  T  *  R  N  F  K  L  V  I  C  F  L  R :   S  Q  E  G  D  L  H  T  C  *  N  I  L  M  L  K  L  *  A  L  E  L  V  T  L  P  S  P  F  L  K  S  *  L  L  P  W  Q  R :   E  H  M  N  C  Q  H  *  M  V  T  V  V  M  V  L  S  K  E  K  K  *  V  V  P  P  L  V  I  F  Q  *  Y  D  I  S  S  T  I  Y  C  P  I  L  V  S  L  P  S  F  A  T  I  I  M  V  L  A  F  T  D  S  L  S  F  L  V  L  Y  Q  F  D  C  S  F  V  L  F  F  P  Q  I  H  C  N  I  L  Y  S  G  I  H  S  I  K  L  K  N  F  L  F  Y  S  *  R  H  *  G  M  C  R  C  </first_frame>
            <second_frame>  C  N  T  L  Y  G  E  N  F :   L  Q  D  T  G  L  P  Q  *  K  L  S  E  T  S  S  W  L  S  V  S  *   : D  R  K  K  E  I  C  T  H  V  E  T  S  *  C  S  N  Y  K  P  W  N  W  *  H  Y  R  A  H  S  *  S  H  N  F  C  H  G  K   : E  S  T  *  T  V  N  I  K  W  L  Q  W  L  W  C  *  A  R  R  K  S  K  *  C  P  L  S  S  Y  F  S  N  M  I  L  A  L  L  F  I  V  Q  S  L  F  L  F  L  L  L  L  Q  *  *  W  F  W  P  S  L  I  V  C  L  S  S  F  C  T  N  L  I  V  H  L  S  F  S  F  L  K  Y  I  A  I  F  F  I  Q  V  S  T  Q  *  S  *  K  T  S  S  S  I  H  N  V  I  K  G  C  A  D  V </second_frame>
            <third_frame>   A  T  P  S  T  E  K  T   : S  Y  K  T  Q  V  S  R  N  E  N  L  A  K  L  Q  A  G  Y  L  F  P  E  :  I  A  R  R  R  S  A  H  M  L  K  H  P  D  A  Q  I  I  S  L  G  I  G  D  T  T  E  P  I  P  E  V  I  T  S  A  M  A  K  :  R  A  H  E  L  S  T  L  N  G  Y  S  G  Y  G  A  E  Q  G  E  K  V  S  S  A  P  S  R  H  I  S  V  I  *  Y  *  L  Y  Y  L  L  S  N  P  C  F  S  S  F  F  C  Y  N  N  N  G  S  G  L  H  *  *  F  V  F  P  R  F  V  P  I  *  L  F  I  C  P  F  L  S  S  N  T  L  Q  Y  S  L  F  R  Y  P  L  N  K  V  K  K  L  P  L  L  F  I  T  S  L  R  D  V  Q  M   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0117B06.1" strand="-"/>
                <serials PGL_serial="4" AGS_serial="4" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="48379" stop="48355"/>
                    <exon start="47981" stop="47914"/>
                    <exon start="47540" stop="47424"/>
                    <exon start="47090" stop="46989"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>309</number_coding_nucleotides>
                  <number_encoded_amino_acids>103</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ATPSTEKTSYKTQVSRNENLAKLQAGYLFPEIARRRSAHMLKHPDAQIISLGIGDTTEPIPEVITSAMAKRAHELSTLNGYSGYGAEQGEKVSSAPSRHISVI*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0117B06.1" strand="-"/>
                <serials PGL_serial="4" AGS_serial="4" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="46993" stop="46778"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>213</number_coding_nucleotides>
                  <number_encoded_amino_acids>71</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>YDISSTIYCPILVSLPSFATIIMVLAFTDSLSFLVLYQFDCSFVLFFPQIHCNILYSGIHSIKLKNFLFYS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="+" PGL_start="26234" PGL_stop="31829"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="26234" e_stop="26755"/>
            <exon e_start="28266" e_stop="28574"/>
            <exon e_start="28955" e_stop="29508"/>
            <exon e_start="31806" e_stop="31829"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.935" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.991" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.858" e_score="0.968"/>
          <exon-only e_score="0.625"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="26234" e_stop="26755" e_length="522"/>
          </exon>
          <intron i_serial="1" don_prob="0.935" acc_prob="0.999">
            <gDNA_intron_boundary i_start="26756" i_stop="28265" i_length="1510"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="28266" e_stop="28574" e_length="309"/>
          </exon>
          <intron i_serial="2" don_prob="1.000" acc_prob="0.991">
            <gDNA_intron_boundary i_start="28575" i_stop="28954" i_length="380"/>
          </intron>
          <exon e_serial="3" e_score="0.968">
            <gDNA_exon_boundary e_start="28955" e_stop="29508" e_length="554"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.858">
            <gDNA_intron_boundary i_start="29509" i_stop="31805" i_length="2297"/>
          </intron>
          <exon e_serial="4" e_score="0.625">
            <gDNA_exon_boundary e_start="31806" e_stop="31829" e_length="24"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26234" stop="26755"/>
              <exon start="28266" stop="28574"/>
              <exon start="28955" stop="29508"/>
              <exon start="31806" stop="31829"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U313843" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TCTTCCACTCATTTCATTGTCTATATTCTTCTTCTTTTCTACTTTCTCCTCCCATTTTTCCCATTACAAACACTACATTTTTCTGTTTTTGATTGAAAGTTTTCATTTTTAGTATTTTGGACTAAATCACCTGCTTTGGGTTTTCTTGATTTTTGCAGGGTTTTTCTTTTTTGTCTGACTGACCCTTTTGGGGGTATTTTCGAATCTTGAAAAGTTCTGAGTTCTCTTCATAAAAAGCTTCAAGACACTATTTTTTCAATTTTTCTTGTGTGAAACTCAAATGGGTATGTCTTGAATTAGTGTTAGGAGGCAAAGAGTTAAGTAATAAAAGATAAAAAGATGAAGATACAGTGTGATGTGTGTGAGAAAGCTCAAGCTACTGTGATTTGCTGTGCTGATGAGGCTGCTCTGTGTGCAAAATGTGATATTGAAGTTCATGCTGCTAATAAATTAGCAAGCAAGCACCAAAGGCTTCATCTTCAGTGCCTATCTAACAAGCTTCCTCCTTGTGATATTTGCCAA : GATAAAGCAGCCTTCATCTTCTGTGTTGAGGATAGAGCTCTCTTTTGCAAGGACTGTGACGAAGCAATTCATTCAGCCAGCAGCCTCGCTAAGAACCACCAACGCTTCTTAGCCACTGGAATCCGTGTAGCCTTGAGCTCAAGCTGTAATAAGGAATCAGTAAAAAACCAACTGCAGCCACAACCACCTCAGCAGAATTCCCAACAAGTTGGCTTGAAAATGCCTCCACAGCAGTTGTCCTGTATAACATCACCATCTTGGCCTGTCGATGATTTACTAGGATTTCCAGATTATGAGTCGAGTGACAAG : AAGGATCTACTTGAGCTTGGTGAATTTGAGTGGTTAGGGGGCATTGATCTCTTTGGTGAACAAACAGCAGCTGAAGTGCCCGAGCTATCAGTACCTCAGTCGAGCAATACAAATATTTACAGGACAACCAAATATCAAATGCCTTACAAGAAGTCCAGAATTGAAATCCCAGATGATGATGAGTATTTTACTGTCCCCGATCTTGGTTGAACTCCAACTTCAAGAAGTTTCCAATTAAATGTGCATGTGTGCTTGTGTGTAGTACTTAATCAGTGCTCTCATACTGTCAACAGATATGTTCAGTAAGTAGAAAAAGTATTGTTCTGCTTAAGATACTCCTTATCTTGCTTACTTTCGCAGTGCGCTCATATTGTCAACAGACATGTTCAGTAAGTAGAGGAAACACTATTCTGCTTAAGATATCCTTTATCTTGCTTACATTTCGCCTCCTTGGTAGAATTGCATCAATTTCTTCTTCTTATAGCAATTTTATAAACATATTGATGCATTCTTGGACATGCTATGCATATTGCTACATAGTAAAATCTGGTTTT : TTGAGTCAAAAACAAACAACAACA</gDNA_template>
            <first_frame> S  S  T  H  F  I  V  Y  I  L  L  L  F  Y  F  L  L  P  F  F  P  L  Q  T  L  H  F  S  V  F  D  *  K  F  S  F  L  V  F  W  T  K  S  P  A  L  G  F  L  D  F  C  R  V  F  L  F  C  L  T  D  P  F  G  G  I  F  E  S  *  K  V  L  S  S  L  H  K  K  L  Q  D  T  I  F  S  I  F  L  V  *  N  S  N  G  Y  V  L  N  *  C  *  E  A  K  S  *  V  I  K  D  K  K  M  K  I  Q  C  D  V  C  E  K  A  Q  A  T  V  I  C  C  A  D  E  A  A  L  C  A  K  C  D  I  E  V  H  A  A  N  K  L  A  S  K  H  Q  R  L  H  L  Q  C  L  S  N  K  L  P  P  C  D  I  C  Q  :  D  K  A  A  F  I  F  C  V  E  D  R  A  L  F  C  K  D  C  D  E  A  I  H  S  A  S  S  L  A  K  N  H  Q  R  F  L  A  T  G  I  R  V  A  L  S  S  S  C  N  K  E  S  V  K  N  Q  L  Q  P  Q  P  P  Q  Q  N  S  Q  Q  V  G  L  K  M  P  P  Q  Q  L  S  C  I  T  S  P  S  W  P  V  D  D  L  L  G  F  P  D  Y  E  S  S  D  K  :  K  D  L  L  E  L  G  E  F  E  W  L  G  G  I  D  L  F  G  E  Q  T  A  A  E  V  P  E  L  S  V  P  Q  S  S  N  T  N  I  Y  R  T  T  K  Y  Q  M  P  Y  K  K  S  R  I  E  I  P  D  D  D  E  Y  F  T  V  P  D  L  G  *  T  P  T  S  R  S  F  Q  L  N  V  H  V  C  L  C  V  V  L  N  Q  C  S  H  T  V  N  R  Y  V  Q  *  V  E  K  V  L  F  C  L  R  Y  S  L  S  C  L  L  S  Q  C  A  H  I  V  N  R  H  V  Q  *  V  E  E  T  L  F  C  L  R  Y  P  L  S  C  L  H  F  A  S  L  V  E  L  H  Q  F  L  L  L  I  A  I  L  *  T  Y  *  C  I  L  G  H  A  M  H  I  A  T  *  *  N  L  V  F :   *  V  K  N  K  Q  Q   </first_frame>
            <second_frame>  L  P  L  I  S  L  S  I  F  F  F  F  S  T  F  S  S  H  F  S  H  Y  K  H  Y  I  F  L  F  L  I  E  S  F  H  F  *  Y  F  G  L  N  H  L  L  W  V  F  L  I  F  A  G  F  F  F  F  V  *  L  T  L  L  G  V  F  S  N  L  E  K  F  *  V  L  F  I  K  S  F  K  T  L  F  F  Q  F  F  L  C  E  T  Q  M  G  M  S  *  I  S  V  R  R  Q  R  V  K  *  *  K  I  K  R  *  R  Y  S  V  M  C  V  R  K  L  K  L  L  *  F  A  V  L  M  R  L  L  C  V  Q  N  V  I  L  K  F  M  L  L  I  N  *  Q  A  S  T  K  G  F  I  F  S  A  Y  L  T  S  F  L  L  V  I  F  A  K :   I  K  Q  P  S  S  S  V  L  R  I  E  L  S  F  A  R  T  V  T  K  Q  F  I  Q  P  A  A  S  L  R  T  T  N  A  S  *  P  L  E  S  V  *  P  *  A  Q  A  V  I  R  N  Q  *  K  T  N  C  S  H  N  H  L  S  R  I  P  N  K  L  A  *  K  C  L  H  S  S  C  P  V  *  H  H  H  L  G  L  S  M  I  Y  *  D  F  Q  I  M  S  R  V  T  R :   R  I  Y  L  S  L  V  N  L  S  G  *  G  A  L  I  S  L  V  N  K  Q  Q  L  K  C  P  S  Y  Q  Y  L  S  R  A  I  Q  I  F  T  G  Q  P  N  I  K  C  L  T  R  S  P  E  L  K  S  Q  M  M  M  S  I  L  L  S  P  I  L  V  E  L  Q  L  Q  E  V  S  N  *  M  C  M  C  A  C  V  *  Y  L  I  S  A  L  I  L  S  T  D  M  F  S  K  *  K  K  Y  C  S  A  *  D  T  P  Y  L  A  Y  F  R  S  A  L  I  L  S  T  D  M  F  S  K  *  R  K  H  Y  S  A  *  D  I  L  Y  L  A  Y  I  S  P  P  W  *  N  C  I  N  F  F  F  L  *  Q  F  Y  K  H  I  D  A  F  L  D  M  L  C  I  L  L  H  S  K  I  W  F   : F  E  S  K  T  N  N  N  </second_frame>
            <third_frame>   F  H  S  F  H  C  L  Y  S  S  S  F  L  L  S  P  P  I  F  P  I  T  N  T  T  F  F  C  F  *  L  K  V  F  I  F  S  I  L  D  *  I  T  C  F  G  F  S  *  F  L  Q  G  F  S  F  L  S  D  *  P  F  W  G  Y  F  R  I  L  K  S  S  E  F  S  S  *  K  A  S  R  H  Y  F  F  N  F  S  C  V  K  L  K  W  V  C  L  E  L  V  L  G  G  K  E  L  S  N  K  R  *  K  D  E  D  T  V  *  C  V  *  E  S  S  S  Y  C  D  L  L  C  *  *  G  C  S  V  C  K  M  *  Y  *  S  S  C  C  *  *  I  S  K  Q  A  P  K  A  S  S  S  V  P  I  *  Q  A  S  S  L  *  Y  L  P   : R  *  S  S  L  H  L  L  C  *  G  *  S  S  L  L  Q  G  L  *  R  S  N  S  F  S  Q  Q  P  R  *  E  P  P  T  L  L  S  H  W  N  P  C  S  L  E  L  K  L  *  *  G  I  S  K  K  P  T  A  A  T  T  T  S  A  E  F  P  T  S  W  L  E  N  A  S  T  A  V  V  L  Y  N  I  T  I  L  A  C  R  *  F  T  R  I  S  R  L  *  V  E  *  Q   : E  G  S  T  *  A  W  *  I  *  V  V  R  G  H  *  S  L  W  *  T  N  S  S  *  S  A  R  A  I  S  T  S  V  E  Q  Y  K  Y  L  Q  D  N  Q  I  S  N  A  L  Q  E  V  Q  N  *  N  P  R  *  *  *  V  F  Y  C  P  R  S  W  L  N  S  N  F  K  K  F  P  I  K  C  A  C  V  L  V  C  S  T  *  S  V  L  S  Y  C  Q  Q  I  C  S  V  S  R  K  S  I  V  L  L  K  I  L  L  I  L  L  T  F  A  V  R  S  Y  C  Q  Q  T  C  S  V  S  R  G  N  T  I  L  L  K  I  S  F  I  L  L  T  F  R  L  L  G  R  I  A  S  I  S  S  S  Y  S  N  F  I  N  I  L  M  H  S  W  T  C  Y  A  Y  C  Y  I  V  K  S  G  F  :  L  S  Q  K  Q  T  T  T </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0117B06.1" strand="+"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="26555" stop="26755"/>
                    <exon start="28266" stop="28574"/>
                    <exon start="28955" stop="29164"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>717</number_coding_nucleotides>
                  <number_encoded_amino_acids>239</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VIKDKKMKIQCDVCEKAQATVICCADEAALCAKCDIEVHAANKLASKHQRLHLQCLSNKLPPCDICQDKAAFIFCVEDRALFCKDCDEAIHSASSLAKNHQRFLATGIRVALSSSCNKESVKNQLQPQPPQQNSQQVGLKMPPQQLSCITSPSWPVDDLLGFPDYESSDKKDLLELGEFEWLGGIDLFGEQTAAEVPELSVPQSSNTNIYRTTKYQMPYKKSRIEIPDDDEYFTVPDLG*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0117B06.1" strand="+"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="29224" stop="29508"/>
                    <exon start="31806" stop="31829"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>309</number_coding_nucleotides>
                  <number_encoded_amino_acids>103</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SVLSYCQQICSVSRKSIVLLKILLILLTFAVRSYCQQTCSVSRGNTILLKISFILLTFRLLGRIASISSSYSNFINILMHSWTCYAYCYIVKSGFLSQKQTTT</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="28319" e_stop="28391"/>
            <exon e_start="28473" e_stop="28574"/>
            <exon e_start="28955" e_stop="29286"/>
            <exon e_start="30014" e_stop="30034"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.900" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.991" e_score="0.980"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="1.000"/>
          <exon-only e_score="0.762"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="28319" e_stop="28391" e_length="73"/>
          </exon>
          <intron i_serial="1" don_prob="0.900" acc_prob="0.000">
            <gDNA_intron_boundary i_start="28392" i_stop="28472" i_length="81"/>
          </intron>
          <exon e_serial="2" e_score="0.980">
            <gDNA_exon_boundary e_start="28473" e_stop="28574" e_length="102"/>
          </exon>
          <intron i_serial="2" don_prob="1.000" acc_prob="0.991">
            <gDNA_intron_boundary i_start="28575" i_stop="28954" i_length="380"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="28955" e_stop="29286" e_length="332"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="29287" i_stop="30013" i_length="727"/>
          </intron>
          <exon e_serial="4" e_score="0.762">
            <gDNA_exon_boundary e_start="30014" e_stop="30034" e_length="21"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28319" stop="28391"/>
              <exon start="28473" stop="28574"/>
              <exon start="28955" stop="29286"/>
              <exon start="30014" stop="30034"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U313842" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CTGTGACGAAGCAATTCATTCAGCCAGCAGCCTCGCTAAGAACCACCAACGCTTCTTAGCCACTGGAATCCGT : GTTGGCTTGAAAATGCCTCCACAGCAGTTGTCCTGTATAACATCACCATCTTGGCCTGTCGATGATTTACTAGGATTTCCAGATTATGAGTCGAGTGACAAG : AAGGATCTACTTGAGCTTGGTGAATTTGAGTGGTTAGGGGGCATTGATCTCTTTGGTGAACAAACAGCAGCTGAAGTGCCCGAGCTATCAGTACCTCAGTCGAGCAATACAAATATTTACAGGACAACCAAATATCAAATGCCTTACAAGAAGTCCAGAATTGAAATCCCAGATGATGATGAGTATTTTACTGTCCCCGATCTTGGTTGAACTCCAACTTCAAGAAGTTTCCAATTAAATGTGCATGTGTGCTTGTGTGTAGTACTTAATCAGTGCTCTCATACTGTCAACAGATATGTTCAGTAAGTAGAAAAAGTATTGTTCTGCTTAAG : ATGGAAAAAAGAAAAAAGATA</gDNA_template>
            <first_frame> L  *  R  S  N  S  F  S  Q  Q  P  R  *  E  P  P  T  L  L  S  H  W  N  P   : C  W  L  E  N  A  S  T  A  V  V  L  Y  N  I  T  I  L  A  C  R  *  F  T  R  I  S  R  L  *  V  E  *  Q   : E  G  S  T  *  A  W  *  I  *  V  V  R  G  H  *  S  L  W  *  T  N  S  S  *  S  A  R  A  I  S  T  S  V  E  Q  Y  K  Y  L  Q  D  N  Q  I  S  N  A  L  Q  E  V  Q  N  *  N  P  R  *  *  *  V  F  Y  C  P  R  S  W  L  N  S  N  F  K  K  F  P  I  K  C  A  C  V  L  V  C  S  T  *  S  V  L  S  Y  C  Q  Q  I  C  S  V  S  R  K  S  I  V  L  L  K  :  M  E  K  R  K  K  I </first_frame>
            <second_frame>  C  D  E  A  I  H  S  A  S  S  L  A  K  N  H  Q  R  F  L  A  T  G  I  R  :  V  G  L  K  M  P  P  Q  Q  L  S  C  I  T  S  P  S  W  P  V  D  D  L  L  G  F  P  D  Y  E  S  S  D  K  :  K  D  L  L  E  L  G  E  F  E  W  L  G  G  I  D  L  F  G  E  Q  T  A  A  E  V  P  E  L  S  V  P  Q  S  S  N  T  N  I  Y  R  T  T  K  Y  Q  M  P  Y  K  K  S  R  I  E  I  P  D  D  D  E  Y  F  T  V  P  D  L  G  *  T  P  T  S  R  S  F  Q  L  N  V  H  V  C  L  C  V  V  L  N  Q  C  S  H  T  V  N  R  Y  V  Q  *  V  E  K  V  L  F  C  L  R :   W  K  K  E  K  R   </second_frame>
            <third_frame>   V  T  K  Q  F  I  Q  P  A  A  S  L  R  T  T  N  A  S  *  P  L  E  S  V :   L  A  *  K  C  L  H  S  S  C  P  V  *  H  H  H  L  G  L  S  M  I  Y  *  D  F  Q  I  M  S  R  V  T  R :   R  I  Y  L  S  L  V  N  L  S  G  *  G  A  L  I  S  L  V  N  K  Q  Q  L  K  C  P  S  Y  Q  Y  L  S  R  A  I  Q  I  F  T  G  Q  P  N  I  K  C  L  T  R  S  P  E  L  K  S  Q  M  M  M  S  I  L  L  S  P  I  L  V  E  L  Q  L  Q  E  V  S  N  *  M  C  M  C  A  C  V  *  Y  L  I  S  A  L  I  L  S  T  D  M  F  S  K  *  K  K  Y  C  S  A  *   : D  G  K  K  K  K  D  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0117B06.1" strand="+"/>
                <serials PGL_serial="5" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="28320" stop="28391"/>
                    <exon start="28473" stop="28574"/>
                    <exon start="28955" stop="29164"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>381</number_coding_nucleotides>
                  <number_encoded_amino_acids>127</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>CDEAIHSASSLAKNHQRFLATGIRVGLKMPPQQLSCITSPSWPVDDLLGFPDYESSDKKDLLELGEFEWLGGIDLFGEQTAAEVPELSVPQSSNTNIYRTTKYQMPYKKSRIEIPDDDEYFTVPDLG*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="28266" e_stop="28422"/>
            <exon e_start="28497" e_stop="28574"/>
            <exon e_start="28955" e_stop="29393"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.991" e_score="1.000"/>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="28266" e_stop="28422" e_length="157"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="28423" i_stop="28496" i_length="74"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="28497" e_stop="28574" e_length="78"/>
          </exon>
          <intron i_serial="2" don_prob="1.000" acc_prob="0.991">
            <gDNA_intron_boundary i_start="28575" i_stop="28954" i_length="380"/>
          </intron>
          <exon e_serial="3" e_score="0.998">
            <gDNA_exon_boundary e_start="28955" e_stop="29393" e_length="439"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28266" stop="28422"/>
              <exon start="28497" stop="28574"/>
              <exon start="28955" stop="29393"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U334620" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="3" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GATAAAGCAGCCTTCATCTTCTGTGTTGAGGATAGAGCTCTCTTTTGCAAGGACTGTGACGAAGCAATTCATTCAGCCAGCAGCCTCGCTAAGAACCACCAACGCTTCTTAGCCACTGGAATCCGTGTAGCCTTGAGCTCAAGCTGTAATAAGGAAT : CAGTTGTCCTGTATAACATCACCATCTTGGCCTGTCGATGATTTACTAGGATTTCCAGATTATGAGTCGAGTGACAAG : AAGGATCTACTTGAGCTTGGTGAATTTGAGTGGTTAGGGGGCATTGATCTCTTTGGTGAACAAACAGCAGCTGAAGTGCCCGAGCTATCAGTACCTCAGTCGAGCAATACAAATATTTACAGGACAACCAAATATCAAATGCCTTACAAGAAGTCCAGAATTGAAATCCCAGATGATGATGAGTATTTTACTGTCCCCGATCTTGGTTGAACTCCAACTTCAAGAAGTTTCCAATTAAATGTGCATGTGTGCTTGTGTGTAGTACTTAATCAGTGCTCTCATACTGTCAACAGATATGTTCAGTAAGTAGAAAAAGTATTGTTCTGCTTAAGATACTCCTTATCTTGCTTACTTTCGCAGTGCGCTCATATTGTCAACAGACATGTTCAGTAAGTAGAGGAAACACTATTCTGCTTAAGATATCCTTTATCTTGCTTAC</gDNA_template>
            <first_frame> D  K  A  A  F  I  F  C  V  E  D  R  A  L  F  C  K  D  C  D  E  A  I  H  S  A  S  S  L  A  K  N  H  Q  R  F  L  A  T  G  I  R  V  A  L  S  S  S  C  N  K  E   : S  V  V  L  Y  N  I  T  I  L  A  C  R  *  F  T  R  I  S  R  L  *  V  E  *  Q   : E  G  S  T  *  A  W  *  I  *  V  V  R  G  H  *  S  L  W  *  T  N  S  S  *  S  A  R  A  I  S  T  S  V  E  Q  Y  K  Y  L  Q  D  N  Q  I  S  N  A  L  Q  E  V  Q  N  *  N  P  R  *  *  *  V  F  Y  C  P  R  S  W  L  N  S  N  F  K  K  F  P  I  K  C  A  C  V  L  V  C  S  T  *  S  V  L  S  Y  C  Q  Q  I  C  S  V  S  R  K  S  I  V  L  L  K  I  L  L  I  L  L  T  F  A  V  R  S  Y  C  Q  Q  T  C  S  V  S  R  G  N  T  I  L  L  K  I  S  F  I  L  L   </first_frame>
            <second_frame>  I  K  Q  P  S  S  S  V  L  R  I  E  L  S  F  A  R  T  V  T  K  Q  F  I  Q  P  A  A  S  L  R  T  T  N  A  S  *  P  L  E  S  V  *  P  *  A  Q  A  V  I  R  N  :  Q  L  S  C  I  T  S  P  S  W  P  V  D  D  L  L  G  F  P  D  Y  E  S  S  D  K  :  K  D  L  L  E  L  G  E  F  E  W  L  G  G  I  D  L  F  G  E  Q  T  A  A  E  V  P  E  L  S  V  P  Q  S  S  N  T  N  I  Y  R  T  T  K  Y  Q  M  P  Y  K  K  S  R  I  E  I  P  D  D  D  E  Y  F  T  V  P  D  L  G  *  T  P  T  S  R  S  F  Q  L  N  V  H  V  C  L  C  V  V  L  N  Q  C  S  H  T  V  N  R  Y  V  Q  *  V  E  K  V  L  F  C  L  R  Y  S  L  S  C  L  L  S  Q  C  A  H  I  V  N  R  H  V  Q  *  V  E  E  T  L  F  C  L  R  Y  P  L  S  C  L  </second_frame>
            <third_frame>   *  S  S  L  H  L  L  C  *  G  *  S  S  L  L  Q  G  L  *  R  S  N  S  F  S  Q  Q  P  R  *  E  P  P  T  L  L  S  H  W  N  P  C  S  L  E  L  K  L  *  *  G  I :   S  C  P  V  *  H  H  H  L  G  L  S  M  I  Y  *  D  F  Q  I  M  S  R  V  T  R :   R  I  Y  L  S  L  V  N  L  S  G  *  G  A  L  I  S  L  V  N  K  Q  Q  L  K  C  P  S  Y  Q  Y  L  S  R  A  I  Q  I  F  T  G  Q  P  N  I  K  C  L  T  R  S  P  E  L  K  S  Q  M  M  M  S  I  L  L  S  P  I  L  V  E  L  Q  L  Q  E  V  S  N  *  M  C  M  C  A  C  V  *  Y  L  I  S  A  L  I  L  S  T  D  M  F  S  K  *  K  K  Y  C  S  A  *  D  T  P  Y  L  A  Y  F  R  S  A  L  I  L  S  T  D  M  F  S  K  *  R  K  H  Y  S  A  *  D  I  L  Y  L  A  Y </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0117B06.1" strand="+"/>
                <serials PGL_serial="5" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="28402" stop="28422"/>
                    <exon start="28497" stop="28574"/>
                    <exon start="28955" stop="29164"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>306</number_coding_nucleotides>
                  <number_encoded_amino_acids>102</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>AQAVIRNQLSCITSPSWPVDDLLGFPDYESSDKKDLLELGEFEWLGGIDLFGEQTAAEVPELSVPQSSNTNIYRTTKYQMPYKKSRIEIPDDDEYFTVPDLG*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="4">
          <exon_coordinates>
            <exon e_start="26272" e_stop="27145"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.999"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.999">
            <gDNA_exon_boundary e_start="26272" e_stop="27145" e_length="874"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26272" stop="27145"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U334622" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="4" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CTACTTTCTCCTCCCATTTTTCCCATTACAAACACTACATTTTTCTGTTTTTGATTGAAAGTTTTCATTTTTAGTATTTTGGACTAAATCACCTGCTTTGGGTTTTCTTGATTTTTGCAGGGTTTTTCTTTTTTGTCTGACTGACCCTTTTGGGGGTATTTTCGAATCTTGAAAAGTTCTGAGTTCTCTTCATAAAAAGCTTCAAGACACTATTTTTTCAATTTTTCTTGTGTGAAACTCAAATGGGTATGTCTTGAATTAGTGTTAGGAGGCAAAGAGTTAAGTAATAAAAGATAAAAAGATGAAGATACAGTGTGATGTGTGTGAGAAAGCTCAAGCTACTGTGATTTGCTGTGCTGATGAGGCTGCTCTGTGTGCAAAATGTGATATTGAAGTTCATGCTGCTAATAAATTAGCAAGCAAGCACCAAAGGCTTCATCTTCAGTGCCTATCTAACAAGCTTCCTCCTTGTGATATTTGCCAAGTAAGGGAACTTCTTCTTTTTGTTGCCCTGTTCATGGAATAATTTGTTTTTAGTCTAGATTGTGTTACTAATATTTCAATGTGGTAGTTGTGTTGCTCCTTGATTAATGGAAAGTTAACTTGTGTACCCTCCCACTGGTTTGGGCTTTGGACTTTCAACATGGAAGTCTGAAGTGCCTTCTGGGTCAATCTCAGTGCACCGGACTTGCCTAGTGCTAATTACATCTTCCATGTGGTTTGCAAGCTATTATATAGGAACGGGGTTTGCAAGCTGTTAAATAAGAGCGGGGTTAGCCCCTATGCGCACTCAAGGGCAGCGGCTGCGGGTTTCCTTGTCATAAAAAAAGTTGGAAAGTTAACTTGTGATGTTCCTTTTGATTAGACTCTGATT</gDNA_template>
            <first_frame> L  L  S  P  P  I  F  P  I  T  N  T  T  F  F  C  F  *  L  K  V  F  I  F  S  I  L  D  *  I  T  C  F  G  F  S  *  F  L  Q  G  F  S  F  L  S  D  *  P  F  W  G  Y  F  R  I  L  K  S  S  E  F  S  S  *  K  A  S  R  H  Y  F  F  N  F  S  C  V  K  L  K  W  V  C  L  E  L  V  L  G  G  K  E  L  S  N  K  R  *  K  D  E  D  T  V  *  C  V  *  E  S  S  S  Y  C  D  L  L  C  *  *  G  C  S  V  C  K  M  *  Y  *  S  S  C  C  *  *  I  S  K  Q  A  P  K  A  S  S  S  V  P  I  *  Q  A  S  S  L  *  Y  L  P  S  K  G  T  S  S  F  C  C  P  V  H  G  I  I  C  F  *  S  R  L  C  Y  *  Y  F  N  V  V  V  V  L  L  L  D  *  W  K  V  N  L  C  T  L  P  L  V  W  A  L  D  F  Q  H  G  S  L  K  C  L  L  G  Q  S  Q  C  T  G  L  A  *  C  *  L  H  L  P  C  G  L  Q  A  I  I  *  E  R  G  L  Q  A  V  K  *  E  R  G  *  P  L  C  A  L  K  G  S  G  C  G  F  P  C  H  K  K  S  W  K  V  N  L  *  C  S  F  *  L  D  S  D  </first_frame>
            <second_frame>  Y  F  L  L  P  F  F  P  L  Q  T  L  H  F  S  V  F  D  *  K  F  S  F  L  V  F  W  T  K  S  P  A  L  G  F  L  D  F  C  R  V  F  L  F  C  L  T  D  P  F  G  G  I  F  E  S  *  K  V  L  S  S  L  H  K  K  L  Q  D  T  I  F  S  I  F  L  V  *  N  S  N  G  Y  V  L  N  *  C  *  E  A  K  S  *  V  I  K  D  K  K  M  K  I  Q  C  D  V  C  E  K  A  Q  A  T  V  I  C  C  A  D  E  A  A  L  C  A  K  C  D  I  E  V  H  A  A  N  K  L  A  S  K  H  Q  R  L  H  L  Q  C  L  S  N  K  L  P  P  C  D  I  C  Q  V  R  E  L  L  L  F  V  A  L  F  M  E  *  F  V  F  S  L  D  C  V  T  N  I  S  M  W  *  L  C  C  S  L  I  N  G  K  L  T  C  V  P  S  H  W  F  G  L  W  T  F  N  M  E  V  *  S  A  F  W  V  N  L  S  A  P  D  L  P  S  A  N  Y  I  F  H  V  V  C  K  L  L  Y  R  N  G  V  C  K  L  L  N  K  S  G  V  S  P  Y  A  H  S  R  A  A  A  A  G  F  L  V  I  K  K  V  G  K  L  T  C  D  V  P  F  D  *  T  L  I </second_frame>
            <third_frame>   T  F  S  S  H  F  S  H  Y  K  H  Y  I  F  L  F  L  I  E  S  F  H  F  *  Y  F  G  L  N  H  L  L  W  V  F  L  I  F  A  G  F  F  F  F  V  *  L  T  L  L  G  V  F  S  N  L  E  K  F  *  V  L  F  I  K  S  F  K  T  L  F  F  Q  F  F  L  C  E  T  Q  M  G  M  S  *  I  S  V  R  R  Q  R  V  K  *  *  K  I  K  R  *  R  Y  S  V  M  C  V  R  K  L  K  L  L  *  F  A  V  L  M  R  L  L  C  V  Q  N  V  I  L  K  F  M  L  L  I  N  *  Q  A  S  T  K  G  F  I  F  S  A  Y  L  T  S  F  L  L  V  I  F  A  K  *  G  N  F  F  F  L  L  P  C  S  W  N  N  L  F  L  V  *  I  V  L  L  I  F  Q  C  G  S  C  V  A  P  *  L  M  E  S  *  L  V  Y  P  P  T  G  L  G  F  G  L  S  T  W  K  S  E  V  P  S  G  S  I  S  V  H  R  T  C  L  V  L  I  T  S  S  M  W  F  A  S  Y  Y  I  G  T  G  F  A  S  C  *  I  R  A  G  L  A  P  M  R  T  Q  G  Q  R  L  R  V  S  L  S  *  K  K  L  E  S  *  L  V  M  F  L  L  I  R  L  *   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0117B06.1" strand="+"/>
                <serials PGL_serial="5" AGS_serial="4" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="26555" stop="26797"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>240</number_coding_nucleotides>
                  <number_encoded_amino_acids>80</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VIKDKKMKIQCDVCEKAQATVICCADEAALCAKCDIEVHAANKLASKHQRLHLQCLSNKLPPCDICQVRELLLFVALFME*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0117B06.1" strand="+"/>
                <serials PGL_serial="5" AGS_serial="4" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="26927" stop="27136"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>207</number_coding_nucleotides>
                  <number_encoded_amino_acids>69</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SAFWVNLSAPDLPSANYIFHVVCKLLYRNGVCKLLNKSGVSPYAHSRAAAAGFLVIKKVGKLTCDVPFD*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="+" PGL_start="50494" PGL_stop="54220"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="50494" e_stop="50553"/>
            <exon e_start="52459" e_stop="52515"/>
            <exon e_start="52599" e_stop="52802"/>
            <exon e_start="52946" e_stop="53005"/>
            <exon e_start="53304" e_stop="53430"/>
            <exon e_start="53772" e_stop="54220"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.930" acc_prob="0.986" e_score="1.000"/>
          <exon-intron don_prob="0.964" acc_prob="0.980" e_score="1.000"/>
          <exon-intron don_prob="0.992" acc_prob="0.748" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.986" e_score="1.000"/>
          <exon-intron don_prob="0.990" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="0.984"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="50494" e_stop="50553" e_length="60"/>
          </exon>
          <intron i_serial="1" don_prob="0.930" acc_prob="0.986">
            <gDNA_intron_boundary i_start="50554" i_stop="52458" i_length="1905"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="52459" e_stop="52515" e_length="57"/>
          </exon>
          <intron i_serial="2" don_prob="0.964" acc_prob="0.980">
            <gDNA_intron_boundary i_start="52516" i_stop="52598" i_length="83"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="52599" e_stop="52802" e_length="204"/>
          </exon>
          <intron i_serial="3" don_prob="0.992" acc_prob="0.748">
            <gDNA_intron_boundary i_start="52803" i_stop="52945" i_length="143"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="52946" e_stop="53005" e_length="60"/>
          </exon>
          <intron i_serial="4" don_prob="0.991" acc_prob="0.986">
            <gDNA_intron_boundary i_start="53006" i_stop="53303" i_length="298"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="53304" e_stop="53430" e_length="127"/>
          </exon>
          <intron i_serial="5" don_prob="0.990" acc_prob="0.999">
            <gDNA_intron_boundary i_start="53431" i_stop="53771" i_length="341"/>
          </intron>
          <exon e_serial="6" e_score="0.984">
            <gDNA_exon_boundary e_start="53772" e_stop="54220" e_length="449"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="50494" stop="50553"/>
              <exon start="52459" stop="52515"/>
              <exon start="52599" stop="52802"/>
              <exon start="52946" stop="53005"/>
              <exon start="53304" stop="53430"/>
              <exon start="53772" stop="54220"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U319073" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GAGATCAGGCGAAATCCTAAGGAAAATTGATTTGAAAAATTCGACATGGATCTTAATCCA : CCTGCAGGGGAGGACTATGCACACCCACAGATATGTTTTTTCCATGTGCTCTTCAAG : GCAGCAGCATTAGCGTTTTATATTCTGTCAGCTTTATTTGTTGATAGTTTTGTTATCATCTTTGTGGTAACTGTTCTTTTAGCTGCTCTTGACTTTTGGGTGGTTAAGAACGTCAGTGGACGTATTCTTGTGGGTTTAAGGTGGTGGAATGAAATAGATGACAATGGCGAGAGTGTGTGGAGATTTGAGTGCCTTGATCAAGAG : TCAATGGCTCGCATGAACAAGAAGGATTCCTGGCTGTTTTGGTGGACTTTGTACCTAACA : GCTGTTGCTTGGTTCTTTCTCGCGATATTCTCCCTCATTAGGTTCCAAGCTGATTATCTTCTCGTTGTTGGAGTTTGCTTGACTCTCAGCGTCGCAAATATTGTTGGTTTTACTAGATGCCGCAAAG : ATGCTAAGAAGCAGCTTCAAGCATTTGCAACCCAGACCCTCACTTCTCGGTTCTCCTCTACTCTACAGTCGGCATTTAGTGTTGTTTGAACAATTAATACAGAACAAGCTACTCGTGAGAGGAAACTGGTCGTCAGTGTCCACCTCTACGAACAATCATGTATTGATTATATAATGGTGGTTTGTATACGCTGTGAAATTATGATGGCACATATCGGAAGGATGCTTAGGAGATTTTGACATGGTGTTAATTTGGACCTCTCCTTTATTGAGGTCTTGTACATGCAGAACATGAACGAACTGGGAAAACGTTTTTGTTCCTTTCAGTTTTCATGAATCCAATTGCTTCATTGTATTTTTATTTTTTTTGCACCGCACGGCTGGTGAATCGACGTATGGGCCATATGCATAAATGTATCTGAAATTTGCCATTCACGTTCTGCAGCAAGT</gDNA_template>
            <first_frame> E  I  R  R  N  P  K  E  N  *  F  E  K  F  D  M  D  L  N  P  :  P  A  G  E  D  Y  A  H  P  Q  I  C  F  F  H  V  L  F  K  :  A  A  A  L  A  F  Y  I  L  S  A  L  F  V  D  S  F  V  I  I  F  V  V  T  V  L  L  A  A  L  D  F  W  V  V  K  N  V  S  G  R  I  L  V  G  L  R  W  W  N  E  I  D  D  N  G  E  S  V  W  R  F  E  C  L  D  Q  E  :  S  M  A  R  M  N  K  K  D  S  W  L  F  W  W  T  L  Y  L  T  :  A  V  A  W  F  F  L  A  I  F  S  L  I  R  F  Q  A  D  Y  L  L  V  V  G  V  C  L  T  L  S  V  A  N  I  V  G  F  T  R  C  R  K   : D  A  K  K  Q  L  Q  A  F  A  T  Q  T  L  T  S  R  F  S  S  T  L  Q  S  A  F  S  V  V  *  T  I  N  T  E  Q  A  T  R  E  R  K  L  V  V  S  V  H  L  Y  E  Q  S  C  I  D  Y  I  M  V  V  C  I  R  C  E  I  M  M  A  H  I  G  R  M  L  R  R  F  *  H  G  V  N  L  D  L  S  F  I  E  V  L  Y  M  Q  N  M  N  E  L  G  K  R  F  C  S  F  Q  F  S  *  I  Q  L  L  H  C  I  F  I  F  F  A  P  H  G  W  *  I  D  V  W  A  I  C  I  N  V  S  E  I  C  H  S  R  S  A  A  S </first_frame>
            <second_frame>  R  S  G  E  I  L  R  K  I  D  L  K  N  S  T  W  I  L  I  H :   L  Q  G  R  T  M  H  T  H  R  Y  V  F  S  M  C  S  S  R :   Q  Q  H  *  R  F  I  F  C  Q  L  Y  L  L  I  V  L  L  S  S  L  W  *  L  F  F  *  L  L  L  T  F  G  W  L  R  T  S  V  D  V  F  L  W  V  *  G  G  G  M  K  *  M  T  M  A  R  V  C  G  D  L  S  A  L  I  K  S :   Q  W  L  A  *  T  R  R  I  P  G  C  F  G  G  L  C  T  *  Q :   L  L  L  G  S  F  S  R  Y  S  P  S  L  G  S  K  L  I  I  F  S  L  L  E  F  A  *  L  S  A  S  Q  I  L  L  V  L  L  D  A  A  K  :  M  L  R  S  S  F  K  H  L  Q  P  R  P  S  L  L  G  S  P  L  L  Y  S  R  H  L  V  L  F  E  Q  L  I  Q  N  K  L  L  V  R  G  N  W  S  S  V  S  T  S  T  N  N  H  V  L  I  I  *  W  W  F  V  Y  A  V  K  L  *  W  H  I  S  E  G  C  L  G  D  F  D  M  V  L  I  W  T  S  P  L  L  R  S  C  T  C  R  T  *  T  N  W  E  N  V  F  V  P  F  S  F  H  E  S  N  C  F  I  V  F  L  F  F  L  H  R  T  A  G  E  S  T  Y  G  P  Y  A  *  M  Y  L  K  F  A  I  H  V  L  Q  Q   </second_frame>
            <third_frame>   D  Q  A  K  S  *  G  K  L  I  *  K  I  R  H  G  S  *  S   : T  C  R  G  G  L  C  T  P  T  D  M  F  F  P  C  A  L  Q   : G  S  S  I  S  V  L  Y  S  V  S  F  I  C  *  *  F  C  Y  H  L  C  G  N  C  S  F  S  C  S  *  L  L  G  G  *  E  R  Q  W  T  Y  S  C  G  F  K  V  V  E  *  N  R  *  Q  W  R  E  C  V  E  I  *  V  P  *  S  R   : V  N  G  S  H  E  Q  E  G  F  L  A  V  L  V  D  F  V  P  N   : S  C  C  L  V  L  S  R  D  I  L  P  H  *  V  P  S  *  L  S  S  R  C  W  S  L  L  D  S  Q  R  R  K  Y  C  W  F  Y  *  M  P  Q  R :   C  *  E  A  A  S  S  I  C  N  P  D  P  H  F  S  V  L  L  Y  S  T  V  G  I  *  C  C  L  N  N  *  Y  R  T  S  Y  S  *  E  E  T  G  R  Q  C  P  P  L  R  T  I  M  Y  *  L  Y  N  G  G  L  Y  T  L  *  N  Y  D  G  T  Y  R  K  D  A  *  E  I  L  T  W  C  *  F  G  P  L  L  Y  *  G  L  V  H  A  E  H  E  R  T  G  K  T  F  L  F  L  S  V  F  M  N  P  I  A  S  L  Y  F  Y  F  F  C  T  A  R  L  V  N  R  R  M  G  H  M  H  K  C  I  *  N  L  P  F  T  F  C  S  K  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0117B06.1" strand="+"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="50524" stop="50553"/>
                    <exon start="52459" stop="52515"/>
                    <exon start="52599" stop="52802"/>
                    <exon start="52946" stop="53005"/>
                    <exon start="53304" stop="53430"/>
                    <exon start="53772" stop="53860"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>564</number_coding_nucleotides>
                  <number_encoded_amino_acids>188</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FEKFDMDLNPPAGEDYAHPQICFFHVLFKAAALAFYILSALFVDSFVIIFVVTVLLAALDFWVVKNVSGRILVGLRWWNEIDDNGESVWRFECLDQESMARMNKKDSWLFWWTLYLTAVAWFFLAIFSLIRFQADYLLVVGVCLTLSVANIVGFTRCRKDAKKQLQAFATQTLTSRFSSTLQSAFSVV*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="+" PGL_start="55264" PGL_stop="60372"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="55264" e_stop="55474"/>
            <exon e_start="55992" e_stop="56126"/>
            <exon e_start="56277" e_stop="56363"/>
            <exon e_start="56458" e_stop="56548"/>
            <exon e_start="56693" e_stop="56747"/>
            <exon e_start="56961" e_stop="57021"/>
            <exon e_start="57455" e_stop="57676"/>
            <exon e_start="57987" e_stop="58103"/>
            <exon e_start="58189" e_stop="58278"/>
            <exon e_start="58624" e_stop="58947"/>
            <exon e_start="59953" e_stop="59997"/>
            <exon e_start="60330" e_stop="60372"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.981" acc_prob="0.961" e_score="1.000"/>
          <exon-intron don_prob="0.878" acc_prob="0.988" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.502" e_score="1.000"/>
          <exon-intron don_prob="0.982" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.982" acc_prob="0.779" e_score="1.000"/>
          <exon-intron don_prob="0.864" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.989" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.881" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.481" e_score="0.578"/>
          <exon-only e_score="0.488"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="55264" e_stop="55474" e_length="211"/>
          </exon>
          <intron i_serial="1" don_prob="0.981" acc_prob="0.961">
            <gDNA_intron_boundary i_start="55475" i_stop="55991" i_length="517"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="55992" e_stop="56126" e_length="135"/>
          </exon>
          <intron i_serial="2" don_prob="0.878" acc_prob="0.988">
            <gDNA_intron_boundary i_start="56127" i_stop="56276" i_length="150"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="56277" e_stop="56363" e_length="87"/>
          </exon>
          <intron i_serial="3" don_prob="0.996" acc_prob="0.502">
            <gDNA_intron_boundary i_start="56364" i_stop="56457" i_length="94"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="56458" e_stop="56548" e_length="91"/>
          </exon>
          <intron i_serial="4" don_prob="0.982" acc_prob="1.000">
            <gDNA_intron_boundary i_start="56549" i_stop="56692" i_length="144"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="56693" e_stop="56747" e_length="55"/>
          </exon>
          <intron i_serial="5" don_prob="0.982" acc_prob="0.779">
            <gDNA_intron_boundary i_start="56748" i_stop="56960" i_length="213"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="56961" e_stop="57021" e_length="61"/>
          </exon>
          <intron i_serial="6" don_prob="0.864" acc_prob="0.999">
            <gDNA_intron_boundary i_start="57022" i_stop="57454" i_length="433"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="57455" e_stop="57676" e_length="222"/>
          </exon>
          <intron i_serial="7" don_prob="0.989" acc_prob="0.999">
            <gDNA_intron_boundary i_start="57677" i_stop="57986" i_length="310"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="57987" e_stop="58103" e_length="117"/>
          </exon>
          <intron i_serial="8" don_prob="0.999" acc_prob="0.994">
            <gDNA_intron_boundary i_start="58104" i_stop="58188" i_length="85"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="58189" e_stop="58278" e_length="90"/>
          </exon>
          <intron i_serial="9" don_prob="1.000" acc_prob="0.881">
            <gDNA_intron_boundary i_start="58279" i_stop="58623" i_length="345"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="58624" e_stop="58947" e_length="324"/>
          </exon>
          <intron i_serial="10" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="58948" i_stop="59952" i_length="1005"/>
          </intron>
          <exon e_serial="11" e_score="0.578">
            <gDNA_exon_boundary e_start="59953" e_stop="59997" e_length="45"/>
          </exon>
          <intron i_serial="11" don_prob="0.000" acc_prob="0.481">
            <gDNA_intron_boundary i_start="59998" i_stop="60329" i_length="332"/>
          </intron>
          <exon e_serial="12" e_score="0.488">
            <gDNA_exon_boundary e_start="60330" e_stop="60372" e_length="43"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55264" stop="55474"/>
              <exon start="55992" stop="56126"/>
              <exon start="56277" stop="56363"/>
              <exon start="56458" stop="56548"/>
              <exon start="56693" stop="56747"/>
              <exon start="56961" stop="57021"/>
              <exon start="57455" stop="57676"/>
              <exon start="57987" stop="58103"/>
              <exon start="58189" stop="58278"/>
              <exon start="58624" stop="58947"/>
              <exon start="59953" stop="59997"/>
              <exon start="60330" stop="60372"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U313631" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATATGGACATCAAGAAAATCATCATAGCCCTTCTTCTTCTTCTTTATTCTCTGCCCCAAGTTCTTCTTCACACTGAGGAAGGAAAAAAAGGCACCAAATCAACAACAACATGGCTAGTTTGGTTGCTATTCAACCCAAACAGCCTTCTTTCTCTCTCCTTCCTTCTTCCAATTCTGACTTCAATGGTGCCAGATTGATCTCCTCATTTCAG : TATAAGAGGAAACCATGCTTGTCAAAAGGAGCATTGCAAGTTACAGCCTCGAGTGAAAAGAAAATCCTGATAATGGGAGGCACGCGATTCATTGGTGTGTTCCTATCGAGACTTCTTGTGAAAGAAGGCCACCAG : GTTACTCTATTCACAAGAGGAAAAGCTCCAATCTCTCAACAATTGCCAGGTGAATCGGACCAGGATTATGCTGATTTCTCCTCCAAG : TTATTGCACTTGAAGGGTGACAGAATGGATTTCGATTTTGTGAAGAGCAGTCTTTCTGCAGAGGGCTATGATGTTGTGTATGACATAAATG : GACGTGAAGCAACTGAAGTGGAGCCAATATTGGATGCATTACCTAATCTAGAACA : GTACATCTACTGCTCTTCAGCTGGTGTATACCTTAAAACTGATTATTTACCACATTTTGAG : GTTGATGCAGGTGACCCGAAGAGTAGGCATAAAGGAAAGCTTGAGACAGAAAGCTTGTTAGTATCACGAGATGTTAATTGGACTTCTCTAAGGCCTGTTTATATTTATGGGCCACTTAACTACAATCCTGTTGAAGAGTGGTTCTTCCACCGATTGAAGGCTGGTCGCCCAATTCCGATTCCTAACTCAGGGATGCAAATAACTCAACTTGGACATGTGAAG : GATCTTGCAAAGGCTTTTGTTCAGGTTCTTGGAAATGAGAAAGCAAGCAAGCAAGTATTTAACATATCCGGAGAGAAATATGTCACATTTGATGGATTAGCTAAGGCTTGCGCCAAG : GCTGGTGGTTTCCCGGAACCCGAGCTTGTTCATTACAACCCTAAGGAGTTCGATTTTGGCAAGAAGAAAGCATTCCCATTCCGTGACCAG : CATTTCTTTACATCCATCGAGAAGTCAAAGGCTGAGCTAGGATGGAAACCTGATTTTGATCTGGTGGAAGGTCTTACAGACTCTTACAACCTAGATTTCGGACGAGGAACATTCAGGAAAGCAGCTGATTTCTCTACAGATGATATGATTCTTGAAAAGAAACTAGTTCCCCAGAGCTAATATTTCTGTTTTTCATTTCATTAGTTTTGGTTTCTTGCTTTTTCTCCAAGAAGTTCACAAGTCATTAGTGGCAAACTATTTGAAATTTTCCTTGTATATTAACTTCACTAAAATGAAATGAATGACAACTATTGTCATTTTGCC : ATCGAAAAGGAGTTGAAAATTATTAATAAAATAAGTTCAGGAGTA : GAGACCCAAACAAGTATATCACACGTTAAATGAAAAAAACAAA</gDNA_template>
            <first_frame> I  W  T  S  R  K  S  S  *  P  F  F  F  F  F  I  L  C  P  K  F  F  F  T  L  R  K  E  K  K  A  P  N  Q  Q  Q  H  G  *  F  G  C  Y  S  T  Q  T  A  F  F  L  S  P  S  F  F  Q  F  *  L  Q  W  C  Q  I  D  L  L  I  S   : V  *  E  E  T  M  L  V  K  R  S  I  A  S  Y  S  L  E  *  K  E  N  P  D  N  G  R  H  A  I  H  W  C  V  P  I  E  T  S  C  E  R  R  P  P   : G  Y  S  I  H  K  R  K  S  S  N  L  S  T  I  A  R  *  I  G  P  G  L  C  *  F  L  L  Q   : V  I  A  L  E  G  *  Q  N  G  F  R  F  C  E  E  Q  S  F  C  R  G  L  *  C  C  V  *  H  K  W :   T  *  S  N  *  S  G  A  N  I  G  C  I  T  *  S  R  T  :  V  H  L  L  L  F  S  W  C  I  P  *  N  *  L  F  T  T  F  *   : G  *  C  R  *  P  E  E  *  A  *  R  K  A  *  D  R  K  L  V  S  I  T  R  C  *  L  D  F  S  K  A  C  L  Y  L  W  A  T  *  L  Q  S  C  *  R  V  V  L  P  P  I  E  G  W  S  P  N  S  D  S  *  L  R  D  A  N  N  S  T  W  T  C  E   : G  S  C  K  G  F  C  S  G  S  W  K  *  E  S  K  Q  A  S  I  *  H  I  R  R  E  I  C  H  I  *  W  I  S  *  G  L  R  Q   : G  W  W  F  P  G  T  R  A  C  S  L  Q  P  *  G  V  R  F  W  Q  E  E  S  I  P  I  P  *  P   : A  F  L  Y  I  H  R  E  V  K  G  *  A  R  M  E  T  *  F  *  S  G  G  R  S  Y  R  L  L  Q  P  R  F  R  T  R  N  I  Q  E  S  S  *  F  L  Y  R  *  Y  D  S  *  K  E  T  S  S  P  E  L  I  F  L  F  F  I  S  L  V  L  V  S  C  F  F  S  K  K  F  T  S  H  *  W  Q  T  I  *  N  F  P  C  I  L  T  S  L  K  *  N  E  *  Q  L  L  S  F  C   : H  R  K  G  V  E  N  Y  *  *  N  K  F  R  S   : R  D  P  N  K  Y  I  T  R  *  M  K  K  T   </first_frame>
            <second_frame>  Y  G  H  Q  E  N  H  H  S  P  S  S  S  S  L  F  S  A  P  S  S  S  S  H  *  G  R  K  K  R  H  Q  I  N  N  N  M  A  S  L  V  A  I  Q  P  K  Q  P  S  F  S  L  L  P  S  S  N  S  D  F  N  G  A  R  L  I  S  S  F  Q  :  Y  K  R  K  P  C  L  S  K  G  A  L  Q  V  T  A  S  S  E  K  K  I  L  I  M  G  G  T  R  F  I  G  V  F  L  S  R  L  L  V  K  E  G  H  Q  :  V  T  L  F  T  R  G  K  A  P  I  S  Q  Q  L  P  G  E  S  D  Q  D  Y  A  D  F  S  S  K  :  L  L  H  L  K  G  D  R  M  D  F  D  F  V  K  S  S  L  S  A  E  G  Y  D  V  V  Y  D  I  N   : G  R  E  A  T  E  V  E  P  I  L  D  A  L  P  N  L  E  Q :   Y  I  Y  C  S  S  A  G  V  Y  L  K  T  D  Y  L  P  H  F  E  :  V  D  A  G  D  P  K  S  R  H  K  G  K  L  E  T  E  S  L  L  V  S  R  D  V  N  W  T  S  L  R  P  V  Y  I  Y  G  P  L  N  Y  N  P  V  E  E  W  F  F  H  R  L  K  A  G  R  P  I  P  I  P  N  S  G  M  Q  I  T  Q  L  G  H  V  K  :  D  L  A  K  A  F  V  Q  V  L  G  N  E  K  A  S  K  Q  V  F  N  I  S  G  E  K  Y  V  T  F  D  G  L  A  K  A  C  A  K  :  A  G  G  F  P  E  P  E  L  V  H  Y  N  P  K  E  F  D  F  G  K  K  K  A  F  P  F  R  D  Q  :  H  F  F  T  S  I  E  K  S  K  A  E  L  G  W  K  P  D  F  D  L  V  E  G  L  T  D  S  Y  N  L  D  F  G  R  G  T  F  R  K  A  A  D  F  S  T  D  D  M  I  L  E  K  K  L  V  P  Q  S  *  Y  F  C  F  S  F  H  *  F  W  F  L  A  F  S  P  R  S  S  Q  V  I  S  G  K  L  F  E  I  F  L  V  Y  *  L  H  *  N  E  M  N  D  N  Y  C  H  F  A  :  I  E  K  E  L  K  I  I  N  K  I  S  S  G  V  :  E  T  Q  T  S  I  S  H  V  K  *  K  K  Q  </second_frame>
            <third_frame>   M  D  I  K  K  I  I  I  A  L  L  L  L  L  Y  S  L  P  Q  V  L  L  H  T  E  E  G  K  K  G  T  K  S  T  T  T  W  L  V  W  L  L  F  N  P  N  S  L  L  S  L  S  F  L  L  P  I  L  T  S  M  V  P  D  *  S  P  H  F  S :   I  R  G  N  H  A  C  Q  K  E  H  C  K  L  Q  P  R  V  K  R  K  S  *  *  W  E  A  R  D  S  L  V  C  S  Y  R  D  F  L  *  K  K  A  T  R :   L  L  Y  S  Q  E  E  K  L  Q  S  L  N  N  C  Q  V  N  R  T  R  I  M  L  I  S  P  P  S :   Y  C  T  *  R  V  T  E  W  I  S  I  L  *  R  A  V  F  L  Q  R  A  M  M  L  C  M  T  *  M  :  D  V  K  Q  L  K  W  S  Q  Y  W  M  H  Y  L  I  *  N   : S  T  S  T  A  L  Q  L  V  Y  T  L  K  L  I  I  Y  H  I  L  R :   L  M  Q  V  T  R  R  V  G  I  K  E  S  L  R  Q  K  A  C  *  Y  H  E  M  L  I  G  L  L  *  G  L  F  I  F  M  G  H  L  T  T  I  L  L  K  S  G  S  S  T  D  *  R  L  V  A  Q  F  R  F  L  T  Q  G  C  K  *  L  N  L  D  M  *  R :   I  L  Q  R  L  L  F  R  F  L  E  M  R  K  Q  A  S  K  Y  L  T  Y  P  E  R  N  M  S  H  L  M  D  *  L  R  L  A  P  R :   L  V  V  S  R  N  P  S  L  F  I  T  T  L  R  S  S  I  L  A  R  R  K  H  S  H  S  V  T  S :   I  S  L  H  P  S  R  S  Q  R  L  S  *  D  G  N  L  I  L  I  W  W  K  V  L  Q  T  L  T  T  *  I  S  D  E  E  H  S  G  K  Q  L  I  S  L  Q  M  I  *  F  L  K  R  N  *  F  P  R  A  N  I  S  V  F  H  F  I  S  F  G  F  L  L  F  L  Q  E  V  H  K  S  L  V  A  N  Y  L  K  F  S  L  Y  I  N  F  T  K  M  K  *  M  T  T  I  V  I  L  P :   S  K  R  S  *  K  L  L  I  K  *  V  Q  E  * :   R  P  K  Q  V  Y  H  T  L  N  E  K  N  K </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0117B06.1" strand="+"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="55340" stop="55474"/>
                    <exon start="55992" stop="56126"/>
                    <exon start="56277" stop="56363"/>
                    <exon start="56458" stop="56548"/>
                    <exon start="56693" stop="56747"/>
                    <exon start="56961" stop="57021"/>
                    <exon start="57455" stop="57676"/>
                    <exon start="57987" stop="58103"/>
                    <exon start="58189" stop="58278"/>
                    <exon start="58624" stop="58803"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1170</number_coding_nucleotides>
                  <number_encoded_amino_acids>390</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GRKKRHQINNNMASLVAIQPKQPSFSLLPSSNSDFNGARLISSFQYKRKPCLSKGALQVTASSEKKILIMGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPISQQLPGESDQDYADFSSKLLHLKGDRMDFDFVKSSLSAEGYDVVYDINGREATEVEPILDALPNLEQYIYCSSAGVYLKTDYLPHFEVDAGDPKSRHKGKLETESLLVSRDVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGMQITQLGHVKDLAKAFVQVLGNEKASKQVFNISGEKYVTFDGLAKACAKAGGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFTSIEKSKAELGWKPDFDLVEGLTDSYNLDFGRGTFRKAADFSTDDMILEKKLVPQS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="-" PGL_start="64259" PGL_stop="62836"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="64259" e_stop="64225"/>
            <exon e_start="63765" e_stop="62836"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.900" acc_prob="0.000" e_score="0.429"/>
          <exon-only e_score="0.978"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.429">
            <gDNA_exon_boundary e_start="64259" e_stop="64225" e_length="35"/>
          </exon>
          <intron i_serial="1" don_prob="0.900" acc_prob="0.000">
            <gDNA_intron_boundary i_start="64224" i_stop="63766" i_length="459"/>
          </intron>
          <exon e_serial="2" e_score="0.978">
            <gDNA_exon_boundary e_start="63765" e_stop="62836" e_length="930"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64259" stop="64225"/>
              <exon start="63765" stop="62836"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U324622" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TAAAATGTATTGCTACTTAATTTCTTTTCTCAATT : ATTAACAATTGAAAAAATAAAATAATAGCAGTAACAATTTATTTACATGTCACCGCCTATGACATTAAAAAAATAAAAATAAAAGTTATTCTTTCCTTGTCTATTTTAATAATAAAAATAGTGAGTAAAAAAACAGACGAAATAATTAAAATAAAAATAAAACTAACTCAATGCAGCAAAACCACCTCCTCTCATCATCTGCTTAAACTCATCATAATTAACCATTCCATCTCCATCAATGTCCACTTTGTTAATCATTTGTTTACAATCCTCTACGGTTCGTCCCTGTTTTAGCCCTAACGATGCGAGAACAGATTTCAATTCCTCAACACAAATGAATCCGTCGCCGTTTTGATCGAACACATTGAATGCCTCACGCATATCTTCTTCTTCATCGCGTTCATCCATGATGGTCTGGTAAAGCGAACCGAACTCATCTATGTCAACGCAACCGTCTCCATTCACATCGATTTTCTCGATCATCTGGATTAATTCCGGATCTGGTATGAATATCCCCATATTCTCTAACGAACTGTTTAATTCATTCTTCGTTATCCGTCCGTCGCCGTTCCGATCGAAGATTTGGAAGATACGTCGGAGTTCGTCTGAGTCCATTCTCTTCTGATGCGATTCAACCGCGTCGGAAACGGAAACCGGCGACTGCTGTGGCGGCGCCGGTGACCGCGAATGGATGCGTTTTTGGTGGAACCAAGATGGAGGAAGGAAGGAGATGAGTTTTTTTGGGAGTAAGGAGAGGAGGATTGGGTTGAAGAGATTGAAAATGCAACGAGTTTTGAAGAAAATGGCTGGGAATTGCATTTGGTTTTTGGATTGTAAACTATTAAGGGGTGGTTGTAGTTTGTTTTGTTGAGAAAAAATAGGAGACAAATTAGGAGTAGCTTTTGGGAGAATATATAAAGTGCAAGTTTG</gDNA_template>
            <first_frame> *  N  V  L  L  L  N  F  F  S  Q  L :   L  T  I  E  K  I  K  *  *  Q  *  Q  F  I  Y  M  S  P  P  M  T  L  K  K  *  K  *  K  L  F  F  P  C  L  F  *  *  *  K  *  *  V  K  K  Q  T  K  *  L  K  *  K  *  N  *  L  N  A  A  K  P  P  P  L  I  I  C  L  N  S  S  *  L  T  I  P  S  P  S  M  S  T  L  L  I  I  C  L  Q  S  S  T  V  R  P  C  F  S  P  N  D  A  R  T  D  F  N  S  S  T  Q  M  N  P  S  P  F  *  S  N  T  L  N  A  S  R  I  S  S  S  S  S  R  S  S  M  M  V  W  *  S  E  P  N  S  S  M  S  T  Q  P  S  P  F  T  S  I  F  S  I  I  W  I  N  S  G  S  G  M  N  I  P  I  F  S  N  E  L  F  N  S  F  F  V  I  R  P  S  P  F  R  S  K  I  W  K  I  R  R  S  S  S  E  S  I  L  F  *  C  D  S  T  A  S  E  T  E  T  G  D  C  C  G  G  A  G  D  R  E  W  M  R  F  W  W  N  Q  D  G  G  R  K  E  M  S  F  F  G  S  K  E  R  R  I  G  L  K  R  L  K  M  Q  R  V  L  K  K  M  A  G  N  C  I  W  F  L  D  C  K  L  L  R  G  G  C  S  L  F  C  *  E  K  I  G  D  K  L  G  V  A  F  G  R  I  Y  K  V  Q  V   </first_frame>
            <second_frame>  K  M  Y  C  Y  L  I  S  F  L  N   : Y  *  Q  L  K  K  *  N  N  S  S  N  N  L  F  T  C  H  R  L  *  H  *  K  N  K  N  K  S  Y  S  F  L  V  Y  F  N  N  K  N  S  E  *  K  N  R  R  N  N  *  N  K  N  K  T  N  S  M  Q  Q  N  H  L  L  S  S  S  A  *  T  H  H  N  *  P  F  H  L  H  Q  C  P  L  C  *  S  F  V  Y  N  P  L  R  F  V  P  V  L  A  L  T  M  R  E  Q  I  S  I  P  Q  H  K  *  I  R  R  R  F  D  R  T  H  *  M  P  H  A  Y  L  L  L  H  R  V  H  P  *  W  S  G  K  A  N  R  T  H  L  C  Q  R  N  R  L  H  S  H  R  F  S  R  S  S  G  L  I  P  D  L  V  *  I  S  P  Y  S  L  T  N  C  L  I  H  S  S  L  S  V  R  R  R  S  D  R  R  F  G  R  Y  V  G  V  R  L  S  P  F  S  S  D  A  I  Q  P  R  R  K  R  K  P  A  T  A  V  A  A  P  V  T  A  N  G  C  V  F  G  G  T  K  M  E  E  G  R  R  *  V  F  L  G  V  R  R  G  G  L  G  *  R  D  *  K  C  N  E  F  *  R  K  W  L  G  I  A  F  G  F  W  I  V  N  Y  *  G  V  V  V  V  C  F  V  E  K  K  *  E  T  N  *  E  *  L  L  G  E  Y  I  K  C  K  F  </second_frame>
            <third_frame>   K  C  I  A  T  *  F  L  F  S  I  :  I  N  N  *  K  N  K  I  I  A  V  T  I  Y  L  H  V  T  A  Y  D  I  K  K  I  K  I  K  V  I  L  S  L  S  I  L  I  I  K  I  V  S  K  K  T  D  E  I  I  K  I  K  I  K  L  T  Q  C  S  K  T  T  S  S  H  H  L  L  K  L  I  I  I  N  H  S  I  S  I  N  V  H  F  V  N  H  L  F  T  I  L  Y  G  S  S  L  F  *  P  *  R  C  E  N  R  F  Q  F  L  N  T  N  E  S  V  A  V  L  I  E  H  I  E  C  L  T  H  I  F  F  F  I  A  F  I  H  D  G  L  V  K  R  T  E  L  I  Y  V  N  A  T  V  S  I  H  I  D  F  L  D  H  L  D  *  F  R  I  W  Y  E  Y  P  H  I  L  *  R  T  V  *  F  I  L  R  Y  P  S  V  A  V  P  I  E  D  L  E  D  T  S  E  F  V  *  V  H  S  L  L  M  R  F  N  R  V  G  N  G  N  R  R  L  L  W  R  R  R  *  P  R  M  D  A  F  L  V  E  P  R  W  R  K  E  G  D  E  F  F  W  E  *  G  E  E  D  W  V  E  E  I  E  N  A  T  S  F  E  E  N  G  W  E  L  H  L  V  F  G  L  *  T  I  K  G  W  L  *  F  V  L  L  R  K  N  R  R  Q  I  R  S  S  F  W  E  N  I  *  S  A  S  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0117B06.1" strand="-"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="63753" stop="63472"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>279</number_coding_nucleotides>
                  <number_encoded_amino_acids>93</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KNKIIAVTIYLHVTAYDIKKIKIKVILSLSILIIKIVSKKTDEIIKIKIKLTQCSKTTSSHHLLKLIIINHSISINVHFVNHLFTILYGSSLF*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0117B06.1" strand="-"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="63140" stop="62895"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>243</number_coding_nucleotides>
                  <number_encoded_amino_acids>81</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>CDSTASETETGDCCGGAGDREWMRFWWNQDGGRKEMSFFGSKERRIGLKRLKMQRVLKKMAGNCIWFLDCKLLRGGCSLFC*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0117B06.1" strand="-"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="63256" stop="63032"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>222</number_coding_nucleotides>
                  <number_encoded_amino_acids>74</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ISPYSLTNCLIHSSLSVRRRSDRRFGRYVGVRLSPFSSDAIQPRRKRKPATAVAAPVTANGCVFGGTKMEEGRR*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0117B06.1" strand="-"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="4"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="63344" stop="63141"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>201</number_coding_nucleotides>
                  <number_encoded_amino_acids>67</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SEPNSSMSTQPSPFTSIFSIIWINSGSGMNIPIFSNELFNSFFVIRPSPFRSKIWKIRRSSSESILF*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="+" PGL_start="65875" PGL_stop="66595"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="65875" e_stop="66595"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.999"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.999">
            <gDNA_exon_boundary e_start="65875" e_stop="66595" e_length="721"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="65875" stop="66595"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U325731" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTGTTTCGGAACCAAACAACTCCTACTAGATCAGTGACCTTACGGCGTCGTTTGTTCATCTTCTCCGCAATTATTCTATTCTTCATTCGGATTCAGTTTCTTTGGAGAATTTACTTGGGTTTTTTGCTTAGTGTTAATTCCCTGGTAATTCCTCTCCCTTGCCGATATAGTTCAATTTTTTTTATGTGGTGTTCCGTTGATTGGGCCTCAGTTTGAATTTTTTTTAATTTTAACTTACATTAGCATTAACAGCTATAATTTGCTGTGTTAATTAATCGTACATTGTTTGAATCTCATTAATTATGTGTAATTTAGTGGGTAAGTTGATGTTAACGGGGAAAAGATTATATTCCCGTAATATTTAAGGTAATAATCTAACAATTGATGGTTTATGAGCTGTTTAATGGCTTTGTTAAATGTATTTGATGCTTTGTAGAATTTAATCTCTCAGTAATAATATAACAATTGACTTCTGTGTTTTTTTTTTCTTTATTGACGTTGCGATTTGTATAATTTTCGATCTAGGTGAAATTCTATAGGTTTTGTGTTAAAATACAAACAATGTTTGTCTAGTTTTGGATATGAAATGCTAAGATGGAATTAGGAAGGGGAAGAGGTTTATTTTTGGAATTAGTGAAGGTATGATTGGATTAATCAGCATCGGAGTTTAGATGGAGTAACATGGTCAGTGATGATTCATATAGCGAGACGTAGTTATTTA</gDNA_template>
            <first_frame> L  F  R  N  Q  T  T  P  T  R  S  V  T  L  R  R  R  L  F  I  F  S  A  I  I  L  F  F  I  R  I  Q  F  L  W  R  I  Y  L  G  F  L  L  S  V  N  S  L  V  I  P  L  P  C  R  Y  S  S  I  F  F  M  W  C  S  V  D  W  A  S  V  *  I  F  F  N  F  N  L  H  *  H  *  Q  L  *  F  A  V  L  I  N  R  T  L  F  E  S  H  *  L  C  V  I  *  W  V  S  *  C  *  R  G  K  D  Y  I  P  V  I  F  K  V  I  I  *  Q  L  M  V  Y  E  L  F  N  G  F  V  K  C  I  *  C  F  V  E  F  N  L  S  V  I  I  *  Q  L  T  S  V  F  F  F  S  L  L  T  L  R  F  V  *  F  S  I  *  V  K  F  Y  R  F  C  V  K  I  Q  T  M  F  V  *  F  W  I  *  N  A  K  M  E  L  G  R  G  R  G  L  F  L  E  L  V  K  V  *  L  D  *  S  A  S  E  F  R  W  S  N  M  V  S  D  D  S  Y  S  E  T  *  L  F  </first_frame>
            <second_frame>  C  F  G  T  K  Q  L  L  L  D  Q  *  P  Y  G  V  V  C  S  S  S  P  Q  L  F  Y  S  S  F  G  F  S  F  F  G  E  F  T  W  V  F  C  L  V  L  I  P  W  *  F  L  S  L  A  D  I  V  Q  F  F  L  C  G  V  P  L  I  G  P  Q  F  E  F  F  L  I  L  T  Y  I  S  I  N  S  Y  N  L  L  C  *  L  I  V  H  C  L  N  L  I  N  Y  V  *  F  S  G  *  V  D  V  N  G  E  K  I  I  F  P  *  Y  L  R  *  *  S  N  N  *  W  F  M  S  C  L  M  A  L  L  N  V  F  D  A  L  *  N  L  I  S  Q  *  *  Y  N  N  *  L  L  C  F  F  F  L  Y  *  R  C  D  L  Y  N  F  R  S  R  *  N  S  I  G  F  V  L  K  Y  K  Q  C  L  S  S  F  G  Y  E  M  L  R  W  N  *  E  G  E  E  V  Y  F  W  N  *  *  R  Y  D  W  I  N  Q  H  R  S  L  D  G  V  T  W  S  V  M  I  H  I  A  R  R  S  Y  L </second_frame>
            <third_frame>   V  S  E  P  N  N  S  Y  *  I  S  D  L  T  A  S  F  V  H  L  L  R  N  Y  S  I  L  H  S  D  S  V  S  L  E  N  L  L  G  F  F  A  *  C  *  F  P  G  N  S  S  P  L  P  I  *  F  N  F  F  Y  V  V  F  R  *  L  G  L  S  L  N  F  F  *  F  *  L  T  L  A  L  T  A  I  I  C  C  V  N  *  S  Y  I  V  *  I  S  L  I  M  C  N  L  V  G  K  L  M  L  T  G  K  R  L  Y  S  R  N  I  *  G  N  N  L  T  I  D  G  L  *  A  V  *  W  L  C  *  M  Y  L  M  L  C  R  I  *  S  L  S  N  N  I  T  I  D  F  C  V  F  F  F  F  I  D  V  A  I  C  I  I  F  D  L  G  E  I  L  *  V  L  C  *  N  T  N  N  V  C  L  V  L  D  M  K  C  *  D  G  I  R  K  G  K  R  F  I  F  G  I  S  E  G  M  I  G  L  I  S  I  G  V  *  M  E  *  H  G  Q  *  *  F  I  *  R  D  V  V  I   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0117B06.1" strand="+"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="65875" stop="66090"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>213</number_coding_nucleotides>
                  <number_encoded_amino_acids>71</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LFRNQTTPTRSVTLRRRLFIFSAIILFFIRIQFLWRIYLGFLLSVNSLVIPLPCRYSSIFFMWCSVDWASV*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="+" PGL_start="66934" PGL_stop="68113"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="66934" e_stop="67458"/>
            <exon e_start="67593" e_stop="68113"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.999" e_score="0.989"/>
          <exon-only e_score="0.988"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.989">
            <gDNA_exon_boundary e_start="66934" e_stop="67458" e_length="525"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.999">
            <gDNA_intron_boundary i_start="67459" i_stop="67592" i_length="134"/>
          </intron>
          <exon e_serial="2" e_score="0.988">
            <gDNA_exon_boundary e_start="67593" e_stop="68113" e_length="521"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="66934" stop="67458"/>
              <exon start="67593" stop="68113"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U323881" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GTGGAAAATGTAGCTTATTCTCCCAAAAATGTATTCATTCTATCTGGGCAAAGCAACATGGCTGGTCGTGGTGGAGTAGAAAAGCATCACTGGGATGGCGTTGTACCAAACGAGTGCCATCCAGATGCTTCTAGAATTTTCCGTCTTAGTGCACACCTCCATTATGAGGTGGCACGTGAGCCACTCCACCATGACATTGATGCGAAGAAGACATGTGGTGTTGGACCTGGAATGTCATTTGCAAATGCAATCAAGGACCGAGTGGAAGCTATTGGGTTAGTGCCATGTGCTGTAGGAGGAACTGCGATAAAGGAGTGGGCACACGGGCAACACTTGTATGTGAATATGATCAACAGAGCTAGAGCTGCCATGAGTCATGGAGGAGAAATCAAGGCATTGCTTTGGTATCAAGGAGAGAGTGATACATTATCTCAGCATTGCGTCGATACATATAAGGCTAATATGGAGAAGTTAATACATGATGTTCGTGCTGATTTGCATCTGCCATCTCTGCCAATTATTCAG : GTTGCAATTGCATCAGGAGATGAGAAGTATATTGAAAAGATTCGAGAAGCACAAAAGGCAATTGATCTTCCAAATGTTGTATGTGTTGATGCCATGGGATTGCAGCTAAAGGAAGATAATCTTCATTTAACTACAGAGGCTCAAGTTAAATTAGGCCAAATGTTGGCTGATGCATACCTTACCCATTTTGCACCACAAGAACCTTGTGTTGCTACATCTTGAGAAATTTGATGTATTATGTGTGTGTAAACTAAAAATTATTTAATCCTGGCTCATGAACATAACGTGAGTGGCTGAGTGCTCATATAAGTATGTTATTACTTTGAAGTAAGTTTACTCATTTTCTGTATCTCTTCATTTCTTTACTTTAAAATGAGTATTTCCTTGTCTGCATTTCTTCATTTAGCTTTCAAATATTTTCAATTGTACAATTATTGTGACATATAATACTTATATAGTTTTCAAATATGCAAATTTAATTTAAAAAAACTTTAAAGATAGCAAATTGGGCAACAACTTTG</gDNA_template>
            <first_frame> V  E  N  V  A  Y  S  P  K  N  V  F  I  L  S  G  Q  S  N  M  A  G  R  G  G  V  E  K  H  H  W  D  G  V  V  P  N  E  C  H  P  D  A  S  R  I  F  R  L  S  A  H  L  H  Y  E  V  A  R  E  P  L  H  H  D  I  D  A  K  K  T  C  G  V  G  P  G  M  S  F  A  N  A  I  K  D  R  V  E  A  I  G  L  V  P  C  A  V  G  G  T  A  I  K  E  W  A  H  G  Q  H  L  Y  V  N  M  I  N  R  A  R  A  A  M  S  H  G  G  E  I  K  A  L  L  W  Y  Q  G  E  S  D  T  L  S  Q  H  C  V  D  T  Y  K  A  N  M  E  K  L  I  H  D  V  R  A  D  L  H  L  P  S  L  P  I  I  Q  :  V  A  I  A  S  G  D  E  K  Y  I  E  K  I  R  E  A  Q  K  A  I  D  L  P  N  V  V  C  V  D  A  M  G  L  Q  L  K  E  D  N  L  H  L  T  T  E  A  Q  V  K  L  G  Q  M  L  A  D  A  Y  L  T  H  F  A  P  Q  E  P  C  V  A  T  S  *  E  I  *  C  I  M  C  V  *  T  K  N  Y  L  I  L  A  H  E  H  N  V  S  G  *  V  L  I  *  V  C  Y  Y  F  E  V  S  L  L  I  F  C  I  S  S  F  L  Y  F  K  M  S  I  S  L  S  A  F  L  H  L  A  F  K  Y  F  Q  L  Y  N  Y  C  D  I  *  Y  L  Y  S  F  Q  I  C  K  F  N  L  K  K  L  *  R  *  Q  I  G  Q  Q  L   </first_frame>
            <second_frame>  W  K  M  *  L  I  L  P  K  M  Y  S  F  Y  L  G  K  A  T  W  L  V  V  V  E  *  K  S  I  T  G  M  A  L  Y  Q  T  S  A  I  Q  M  L  L  E  F  S  V  L  V  H  T  S  I  M  R  W  H  V  S  H  S  T  M  T  L  M  R  R  R  H  V  V  L  D  L  E  C  H  L  Q  M  Q  S  R  T  E  W  K  L  L  G  *  C  H  V  L  *  E  E  L  R  *  R  S  G  H  T  G  N  T  C  M  *  I  *  S  T  E  L  E  L  P  *  V  M  E  E  K  S  R  H  C  F  G  I  K  E  R  V  I  H  Y  L  S  I  A  S  I  H  I  R  L  I  W  R  S  *  Y  M  M  F  V  L  I  C  I  C  H  L  C  Q  L  F  R :   L  Q  L  H  Q  E  M  R  S  I  L  K  R  F  E  K  H  K  R  Q  L  I  F  Q  M  L  Y  V  L  M  P  W  D  C  S  *  R  K  I  I  F  I  *  L  Q  R  L  K  L  N  *  A  K  C  W  L  M  H  T  L  P  I  L  H  H  K  N  L  V  L  L  H  L  E  K  F  D  V  L  C  V  C  K  L  K  I  I  *  S  W  L  M  N  I  T  *  V  A  E  C  S  Y  K  Y  V  I  T  L  K  *  V  Y  S  F  S  V  S  L  H  F  F  T  L  K  *  V  F  P  C  L  H  F  F  I  *  L  S  N  I  F  N  C  T  I  I  V  T  Y  N  T  Y  I  V  F  K  Y  A  N  L  I  *  K  N  F  K  D  S  K  L  G  N  N  F  </second_frame>
            <third_frame>   G  K  C  S  L  F  S  Q  K  C  I  H  S  I  W  A  K  Q  H  G  W  S  W  W  S  R  K  A  S  L  G  W  R  C  T  K  R  V  P  S  R  C  F  *  N  F  P  S  *  C  T  P  P  L  *  G  G  T  *  A  T  P  P  *  H  *  C  E  E  D  M  W  C  W  T  W  N  V  I  C  K  C  N  Q  G  P  S  G  S  Y  W  V  S  A  M  C  C  R  R  N  C  D  K  G  V  G  T  R  A  T  L  V  C  E  Y  D  Q  Q  S  *  S  C  H  E  S  W  R  R  N  Q  G  I  A  L  V  S  R  R  E  *  Y  I  I  S  A  L  R  R  Y  I  *  G  *  Y  G  E  V  N  T  *  C  S  C  *  F  A  S  A  I  S  A  N  Y  S   : G  C  N  C  I  R  R  *  E  V  Y  *  K  D  S  R  S  T  K  G  N  *  S  S  K  C  C  M  C  *  C  H  G  I  A  A  K  G  R  *  S  S  F  N  Y  R  G  S  S  *  I  R  P  N  V  G  *  C  I  P  Y  P  F  C  T  T  R  T  L  C  C  Y  I  L  R  N  L  M  Y  Y  V  C  V  N  *  K  L  F  N  P  G  S  *  T  *  R  E  W  L  S  A  H  I  S  M  L  L  L  *  S  K  F  T  H  F  L  Y  L  F  I  S  L  L  *  N  E  Y  F  L  V  C  I  S  S  F  S  F  Q  I  F  S  I  V  Q  L  L  *  H  I  I  L  I  *  F  S  N  M  Q  I  *  F  K  K  T  L  K  I  A  N  W  A  T  T  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0117B06.1" strand="+"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="66934" stop="67458"/>
                    <exon start="67593" stop="67814"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>744</number_coding_nucleotides>
                  <number_encoded_amino_acids>248</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VENVAYSPKNVFILSGQSNMAGRGGVEKHHWDGVVPNECHPDASRIFRLSAHLHYEVAREPLHHDIDAKKTCGVGPGMSFANAIKDRVEAIGLVPCAVGGTAIKEWAHGQHLYVNMINRARAAMSHGGEIKALLWYQGESDTLSQHCVDTYKANMEKLIHDVRADLHLPSLPIIQVAIASGDEKYIEKIREAQKAIDLPNVVCVDAMGLQLKEDNLHLTTEAQVKLGQMLADAYLTHFAPQEPCVATS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="-" PGL_start="70734" PGL_stop="68306"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="70383" e_stop="70304"/>
            <exon e_start="70101" e_stop="69114"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.825" acc_prob="0.942" e_score="0.988"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.988">
            <gDNA_exon_boundary e_start="70383" e_stop="70304" e_length="80"/>
          </exon>
          <intron i_serial="1" don_prob="0.825" acc_prob="0.942">
            <gDNA_intron_boundary i_start="70303" i_stop="70102" i_length="202"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="70101" e_stop="69114" e_length="988"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70383" stop="70304"/>
              <exon start="70101" stop="69559"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U337972" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69628" stop="69114"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U341362" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GAGCCATGTGGAATGCTTCTATATTCTCTTCTGAGGGAAAAACACCATGGGAAGATGTCAAAAGAGAGTATGTGAGAAAG : AGTATATTGTGGGATAATGATATCAAAAGTACAAAGCACACCCTGAAGGAAATGATTACACACTATTCTTCCCTTGGGAGCCCAGAGGGGCTGGCAGTAATTAAATCAGATACCTTTGCAGATGTAGCGTAAGTTTTTCTATCTGCTGCCGTTTACTTCCACCTGTGGTTACATGTGTTGGGATCAAATTTAGTTGCTGTTCAGTTAGTTTCCAAATTAAGTTGTTCATGTTCTGATAATGTATGACATCTGCTTCACCTCATCCCCTTGCTTCTTTTTTTACATAATTGCGTAGTCTGCTCATTCTAAAAGCTACTCAAAAGTTTGACTCAGTAAAAAGGAGGATTTATATTGTGAAAAGGTGCATGAGGTTCTTAATCTTCTCTTTCATCCTTGTACCATTATTCACTTTGAGATTTGTCCAGCATTGGCAGAGTCCATAAGTCCACAACCTTTACTATTATCATTGTTACAACTCTTCACAAATAAGCTGTCGATGGATATAACTAGCCAAGTAACTATGATTGGACTAATTACGTGTGAAATATGCTATATTTGAGAGGAGGTAACGAGAACAGGGAGAGAAGAACATTATTTCTCTCATTTGGCAAAAAAAGTTACTTATTGGAAGGAGTAACACCTTTTCCAACTCCTCTGTAAGTGGTCGAAGATGAGTTTGAGAGGGCATTTGGAAGATTTTATTCCCAAAGGTTTCTTCCTTGGACAGACAGCTACCTGTGAAGCAGTACTTATCCAAGATGATCTTCCCAATAAGAAGAGCATGAAGATTGTGGTTCTAATAGATAGTTCATGTGTGAATGGTATGAAAATTTTGCTAATCATCTTTCTTTGCTAAATGGGGTGGTGGAACATGTTCCTTTTCGTTTGGGATAGTGTATTACTGATGTCAGTGATGTGAGCATTTATTTGTATGGAGGGGTTATACTGTATGTACCACTGGTTAAGAATTTTGCACACTTCTCGCATG</gDNA_template>
            <first_frame> E  P  C  G  M  L  L  Y  S  L  L  R  E  K  H  H  G  K  M  S  K  E  S  M  *  E  R :   V  Y  C  G  I  M  I  S  K  V  Q  S  T  P  *  R  K  *  L  H  T  I  L  P  L  G  A  Q  R  G  W  Q  *  L  N  Q  I  P  L  Q  M  *  R  K  F  F  Y  L  L  P  F  T  S  T  C  G  Y  M  C  W  D  Q  I  *  L  L  F  S  *  F  P  N  *  V  V  H  V  L  I  M  Y  D  I  C  F  T  S  S  P  C  F  F  F  Y  I  I  A  *  S  A  H  S  K  S  Y  S  K  V  *  L  S  K  K  E  D  L  Y  C  E  K  V  H  E  V  L  N  L  L  F  H  P  C  T  I  I  H  F  E  I  C  P  A  L  A  E  S  I  S  P  Q  P  L  L  L  S  L  L  Q  L  F  T  N  K  L  S  M  D  I  T  S  Q  V  T  M  I  G  L  I  T  C  E  I  C  Y  I  *  E  E  V  T  R  T  G  R  E  E  H  Y  F  S  H  L  A  K  K  V  T  Y  W  K  E  *  H  L  F  Q  L  L  C  K  W  S  K  M  S  L  R  G  H  L  E  D  F  I  P  K  G  F  F  L  G  Q  T  A  T  C  E  A  V  L  I  Q  D  D  L  P  N  K  K  S  M  K  I  V  V  L  I  D  S  S  C  V  N  G  M  K  I  L  L  I  I  F  L  C  *  M  G  W  W  N  M  F  L  F  V  W  D  S  V  L  L  M  S  V  M  *  A  F  I  C  M  E  G  L  Y  C  M  Y  H  W  L  R  I  L  H  T  S  R  M </first_frame>
            <second_frame>  S  H  V  E  C  F  Y  I  L  F  *  G  K  N  T  M  G  R  C  Q  K  R  V  C  E  K   : E  Y  I  V  G  *  *  Y  Q  K  Y  K  A  H  P  E  G  N  D  Y  T  L  F  F  P  W  E  P  R  G  A  G  S  N  *  I  R  Y  L  C  R  C  S  V  S  F  S  I  C  C  R  L  L  P  P  V  V  T  C  V  G  I  K  F  S  C  C  S  V  S  F  Q  I  K  L  F  M  F  *  *  C  M  T  S  A  S  P  H  P  L  A  S  F  F  T  *  L  R  S  L  L  I  L  K  A  T  Q  K  F  D  S  V  K  R  R  I  Y  I  V  K  R  C  M  R  F  L  I  F  S  F  I  L  V  P  L  F  T  L  R  F  V  Q  H  W  Q  S  P  *  V  H  N  L  Y  Y  Y  H  C  Y  N  S  S  Q  I  S  C  R  W  I  *  L  A  K  *  L  *  L  D  *  L  R  V  K  Y  A  I  F  E  R  R  *  R  E  Q  G  E  K  N  I  I  S  L  I  W  Q  K  K  L  L  I  G  R  S  N  T  F  S  N  S  S  V  S  G  R  R  *  V  *  E  G  I  W  K  I  L  F  P  K  V  S  S  L  D  R  Q  L  P  V  K  Q  Y  L  S  K  M  I  F  P  I  R  R  A  *  R  L  W  F  *  *  I  V  H  V  *  M  V  *  K  F  C  *  S  S  F  F  A  K  W  G  G  G  T  C  S  F  S  F  G  I  V  Y  Y  *  C  Q  *  C  E  H  L  F  V  W  R  G  Y  T  V  C  T  T  G  *  E  F  C  T  L  L  A   </second_frame>
            <third_frame>   A  M  W  N  A  S  I  F  S  S  E  G  K  T  P  W  E  D  V  K  R  E  Y  V  R  K  :  S  I  L  W  D  N  D  I  K  S  T  K  H  T  L  K  E  M  I  T  H  Y  S  S  L  G  S  P  E  G  L  A  V  I  K  S  D  T  F  A  D  V  A  *  V  F  L  S  A  A  V  Y  F  H  L  W  L  H  V  L  G  S  N  L  V  A  V  Q  L  V  S  K  L  S  C  S  C  S  D  N  V  *  H  L  L  H  L  I  P  L  L  L  F  L  H  N  C  V  V  C  S  F  *  K  L  L  K  S  L  T  Q  *  K  G  G  F  I  L  *  K  G  A  *  G  S  *  S  S  L  S  S  L  Y  H  Y  S  L  *  D  L  S  S  I  G  R  V  H  K  S  T  T  F  T  I  I  I  V  T  T  L  H  K  *  A  V  D  G  Y  N  *  P  S  N  Y  D  W  T  N  Y  V  *  N  M  L  Y  L  R  G  G  N  E  N  R  E  R  R  T  L  F  L  S  F  G  K  K  S  Y  L  L  E  G  V  T  P  F  P  T  P  L  *  V  V  E  D  E  F  E  R  A  F  G  R  F  Y  S  Q  R  F  L  P  W  T  D  S  Y  L  *  S  S  T  Y  P  R  *  S  S  Q  *  E  E  H  E  D  C  G  S  N  R  *  F  M  C  E  W  Y  E  N  F  A  N  H  L  S  L  L  N  G  V  V  E  H  V  P  F  R  L  G  *  C  I  T  D  V  S  D  V  S  I  Y  L  Y  G  G  V  I  L  Y  V  P  L  V  K  N  F  A  H  F  S  H  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0117B06.1" strand="-"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="69773" stop="69543"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>228</number_coding_nucleotides>
                  <number_encoded_amino_acids>76</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LSKKEDLYCEKVHEVLNLLFHPCTIIHFEICPALAESISPQPLLLSLLQLFTNKLSMDITSQVTMIGLITCEICYI*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0117B06.1" strand="-"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="69464" stop="69246"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>216</number_coding_nucleotides>
                  <number_encoded_amino_acids>72</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>HLFQLLCKWSKMSLRGHLEDFIPKGFFLGQTATCEAVLIQDDLPNKKSMKIVVLIDSSCVNGMKILLIIFLC*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0117B06.1" strand="-"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="70381" stop="70304"/>
                    <exon start="70101" stop="69970"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>207</number_coding_nucleotides>
                  <number_encoded_amino_acids>69</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>AMWNASIFSSEGKTPWEDVKREYVRKSILWDNDIKSTKHTLKEMITHYSSLGSPEGLAVIKSDTFADVA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="70734" e_stop="70304"/>
            <exon e_start="70101" e_stop="69974"/>
            <exon e_start="68818" e_stop="68306"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.825" acc_prob="0.942" e_score="0.993"/>
          <exon-intron don_prob="0.998" acc_prob="0.986" e_score="0.992"/>
          <exon-only e_score="0.986"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.993">
            <gDNA_exon_boundary e_start="70734" e_stop="70304" e_length="431"/>
          </exon>
          <intron i_serial="1" don_prob="0.825" acc_prob="0.942">
            <gDNA_intron_boundary i_start="70303" i_stop="70102" i_length="202"/>
          </intron>
          <exon e_serial="2" e_score="0.992">
            <gDNA_exon_boundary e_start="70101" e_stop="69974" e_length="128"/>
          </exon>
          <intron i_serial="2" don_prob="0.998" acc_prob="0.986">
            <gDNA_intron_boundary i_start="69973" i_stop="68819" i_length="1155"/>
          </intron>
          <exon e_serial="3" e_score="0.986">
            <gDNA_exon_boundary e_start="68818" e_stop="68306" e_length="513"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70734" stop="70304"/>
              <exon start="70101" stop="69974"/>
              <exon start="68818" stop="68306"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U324163" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GAAGAGCCGTCACACCAGTTTCGGATCCTCCAAAAATGTGTTATATTTGAAGGAGATCTGACTTGGGGTGAGGTGATATTTTTAAAGGATCTGGGCAACATAGCCTCCAATTCAGAAGTTATAATCTGAGAGATGCTGTTGCCTCAGAAATACAAAATTAATCTTTGTAGGCATGCTTCCTTGTGACACATCAAATAATGAACAATCTGTATGAGAAAAGCATTTTTCATATATAGTTGATGATGGTTTTTCTATCTGTTTTTATGAATATCTACAGGTTGTTTCTGCTTATGTTTTGCAACATGTAACAACTTTATCTTATAGGTGCTTCATCTGTGATGGTTGCAAGAGGAGCCATGTGGAATGCTTCTATATTCTCTTCTGAGGGAAAAACACCATGGGAAGATGTCAAAAGAGAGTATGTGAGAAAG : AGTATATTGTGGGATAATGATATCAAAAGTACAAAGCACACCCTGAAGGAAATGATTACACACTATTCTTCCCTTGGGAGCCCAGAGGGGCTGGCAGTAATTAAATCAGATACCTTTGCAGATGTAGC : GAAACTTTATGGAGAAGAGGAATACTATGAATATGTCTCAGAAAGCCGGAGGAAGCAGCAGATGAAATAAGATAAGTAGTTCACCCTCACTAATCATACAAGTCAATACACCAAGGTGTCGATTAAATTGGACTACCGTTATAATTTATAAAGCAAGAGATAGAGGTGGACTTTGCACATGAGGTTGTTAATGAGTTCTGACTTCCTTCCCGTGACGCGACTATACCCAACTGCTATCCCTTGTTTGAGTTTGAAGTAACATTCCACAACCGCTGAACGAATCCATCAGTTTGAACAATATTCATTGTAGGCTGTACACTAAATTGAACTTAGTGGGTTTACCTAACCTGCATAAACCAACACGATAGCTATGTATCCGTTGGATCATAAGGGGGTACAATTGAAGTTTTTGCTTTATTCATGCTGCAGACATCATTTGCAAATTTAATATATTTATGTTTAGTGATATGACTGAAATCATGTACAACTAAACAAATTTGAAGTTAGTATAAA</gDNA_template>
            <first_frame> E  E  P  S  H  Q  F  R  I  L  Q  K  C  V  I  F  E  G  D  L  T  W  G  E  V  I  F  L  K  D  L  G  N  I  A  S  N  S  E  V  I  I  *  E  M  L  L  P  Q  K  Y  K  I  N  L  C  R  H  A  S  L  *  H  I  K  *  *  T  I  C  M  R  K  A  F  F  I  Y  S  *  *  W  F  F  Y  L  F  L  *  I  S  T  G  C  F  C  L  C  F  A  T  C  N  N  F  I  L  *  V  L  H  L  *  W  L  Q  E  E  P  C  G  M  L  L  Y  S  L  L  R  E  K  H  H  G  K  M  S  K  E  S  M  *  E  R :   V  Y  C  G  I  M  I  S  K  V  Q  S  T  P  *  R  K  *  L  H  T  I  L  P  L  G  A  Q  R  G  W  Q  *  L  N  Q  I  P  L  Q  M  *   : R  N  F  M  E  K  R  N  T  M  N  M  S  Q  K  A  G  G  S  S  R  *  N  K  I  S  S  S  P  S  L  I  I  Q  V  N  T  P  R  C  R  L  N  W  T  T  V  I  I  Y  K  A  R  D  R  G  G  L  C  T  *  G  C  *  *  V  L  T  S  F  P  *  R  D  Y  T  Q  L  L  S  L  V  *  V  *  S  N  I  P  Q  P  L  N  E  S  I  S  L  N  N  I  H  C  R  L  Y  T  K  L  N  L  V  G  L  P  N  L  H  K  P  T  R  *  L  C  I  R  W  I  I  R  G  Y  N  *  S  F  C  F  I  H  A  A  D  I  I  C  K  F  N  I  F  M  F  S  D  M  T  E  I  M  Y  N  *  T  N  L  K  L  V  *  </first_frame>
            <second_frame>  K  S  R  H  T  S  F  G  S  S  K  N  V  L  Y  L  K  E  I  *  L  G  V  R  *  Y  F  *  R  I  W  A  T  *  P  P  I  Q  K  L  *  S  E  R  C  C  C  L  R  N  T  K  L  I  F  V  G  M  L  P  C  D  T  S  N  N  E  Q  S  V  *  E  K  H  F  S  Y  I  V  D  D  G  F  S  I  C  F  Y  E  Y  L  Q  V  V  S  A  Y  V  L  Q  H  V  T  T  L  S  Y  R  C  F  I  C  D  G  C  K  R  S  H  V  E  C  F  Y  I  L  F  *  G  K  N  T  M  G  R  C  Q  K  R  V  C  E  K   : E  Y  I  V  G  *  *  Y  Q  K  Y  K  A  H  P  E  G  N  D  Y  T  L  F  F  P  W  E  P  R  G  A  G  S  N  *  I  R  Y  L  C  R  C  S  :  E  T  L  W  R  R  G  I  L  *  I  C  L  R  K  P  E  E  A  A  D  E  I  R  *  V  V  H  P  H  *  S  Y  K  S  I  H  Q  G  V  D  *  I  G  L  P  L  *  F  I  K  Q  E  I  E  V  D  F  A  H  E  V  V  N  E  F  *  L  P  S  R  D  A  T  I  P  N  C  Y  P  L  F  E  F  E  V  T  F  H  N  R  *  T  N  P  S  V  *  T  I  F  I  V  G  C  T  L  N  *  T  *  W  V  Y  L  T  C  I  N  Q  H  D  S  Y  V  S  V  G  S  *  G  G  T  I  E  V  F  A  L  F  M  L  Q  T  S  F  A  N  L  I  Y  L  C  L  V  I  *  L  K  S  C  T  T  K  Q  I  *  S  *  Y  K </second_frame>
            <third_frame>   R  A  V  T  P  V  S  D  P  P  K  M  C  Y  I  *  R  R  S  D  L  G  *  G  D  I  F  K  G  S  G  Q  H  S  L  Q  F  R  S  Y  N  L  R  D  A  V  A  S  E  I  Q  N  *  S  L  *  A  C  F  L  V  T  H  Q  I  M  N  N  L  Y  E  K  S  I  F  H  I  *  L  M  M  V  F  L  S  V  F  M  N  I  Y  R  L  F  L  L  M  F  C  N  M  *  Q  L  Y  L  I  G  A  S  S  V  M  V  A  R  G  A  M  W  N  A  S  I  F  S  S  E  G  K  T  P  W  E  D  V  K  R  E  Y  V  R  K  :  S  I  L  W  D  N  D  I  K  S  T  K  H  T  L  K  E  M  I  T  H  Y  S  S  L  G  S  P  E  G  L  A  V  I  K  S  D  T  F  A  D  V  A :   K  L  Y  G  E  E  E  Y  Y  E  Y  V  S  E  S  R  R  K  Q  Q  M  K  *  D  K  *  F  T  L  T  N  H  T  S  Q  Y  T  K  V  S  I  K  L  D  Y  R  Y  N  L  *  S  K  R  *  R  W  T  L  H  M  R  L  L  M  S  S  D  F  L  P  V  T  R  L  Y  P  T  A  I  P  C  L  S  L  K  *  H  S  T  T  A  E  R  I  H  Q  F  E  Q  Y  S  L  *  A  V  H  *  I  E  L  S  G  F  T  *  P  A  *  T  N  T  I  A  M  Y  P  L  D  H  K  G  V  Q  L  K  F  L  L  Y  S  C  C  R  H  H  L  Q  I  *  Y  I  Y  V  *  *  Y  D  *  N  H  V  Q  L  N  K  F  E  V  S  I   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0117B06.1" strand="-"/>
                <serials PGL_serial="11" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="70426" stop="70304"/>
                    <exon start="70101" stop="69974"/>
                    <exon start="68818" stop="68749"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>318</number_coding_nucleotides>
                  <number_encoded_amino_acids>106</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QLYLIGASSVMVARGAMWNASIFSSEGKTPWEDVKREYVRKSILWDNDIKSTKHTLKEMITHYSSLGSPEGLAVIKSDTFADVAKLYGEEEYYEYVSESRRKQQMK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="-" PGL_start="76549" PGL_stop="71148"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="76549" e_stop="76447"/>
            <exon e_start="75600" e_stop="75523"/>
            <exon e_start="75335" e_stop="75230"/>
            <exon e_start="72351" e_stop="72243"/>
            <exon e_start="72140" e_stop="72004"/>
            <exon e_start="71252" e_stop="71148"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.985" e_score="1.000"/>
          <exon-intron don_prob="0.953" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.985" e_score="1.000"/>
          <exon-intron don_prob="0.968" acc_prob="0.186" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.999" e_score="0.993"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="76549" e_stop="76447" e_length="103"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.985">
            <gDNA_intron_boundary i_start="76446" i_stop="75601" i_length="846"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="75600" e_stop="75523" e_length="78"/>
          </exon>
          <intron i_serial="2" don_prob="0.953" acc_prob="0.997">
            <gDNA_intron_boundary i_start="75522" i_stop="75336" i_length="187"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="75335" e_stop="75230" e_length="106"/>
          </exon>
          <intron i_serial="3" don_prob="0.991" acc_prob="0.985">
            <gDNA_intron_boundary i_start="75229" i_stop="72352" i_length="2878"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="72351" e_stop="72243" e_length="109"/>
          </exon>
          <intron i_serial="4" don_prob="0.968" acc_prob="0.186">
            <gDNA_intron_boundary i_start="72242" i_stop="72141" i_length="102"/>
          </intron>
          <exon e_serial="5" e_score="0.993">
            <gDNA_exon_boundary e_start="72140" e_stop="72004" e_length="137"/>
          </exon>
          <intron i_serial="5" don_prob="1.000" acc_prob="0.999">
            <gDNA_intron_boundary i_start="72003" i_stop="71253" i_length="751"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="71252" e_stop="71148" e_length="105"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76549" stop="76447"/>
              <exon start="75600" stop="75523"/>
              <exon start="75335" stop="75230"/>
              <exon start="72351" stop="72243"/>
              <exon start="72140" stop="72004"/>
              <exon start="71252" stop="71148"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U326229" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CGGACCCTTCCGCGGCGCCGCTCGTCAATTGCAACCACTCCGATACTCCGCCGTGGTTGGTCGCCGCCGGCTGGGAAAATTCTTCCTCTCTTTTCAAGTCAAG : GCATCGCACTAACTTATCTGCCTCGTCAGAATGATGGATTACAGAAACAAGCTAGTCTTGGCTCCAATGGTCCGAGTG : GGTACATTGCCGTTTAGGCTGCTTGCTGCCCAATATGGAGCTGACATAACCTATGGAGAGGAGATTATTGATCATAAGATCATCAAATGTGAGCGGCGAGTTAATG : GTGTAAGGATGTAGCAGCAGTTGACGTAAACATGGGATGCCCCAAGTCATTCTCTATTAGTGGAGGCATGGGTGCTGCACTGTTGAGCAAACCAGAGCTCATCCATGAT : ATTTTGACAACATTGCGAAGGAACTTGGATGTACCAATAACATGCAAAATTAGGTTATTAAAAGATCCGCAAGATACAGTGGAATTGGCACGACGAATTGAGATGACTGGTGTCTCTGCTCTTGCTGTCCATGGAAG : GAAAGTTCCAGATAGGCCAAGAGATCCTGCAAAGTGGAATGAGATTGCTGATGTTGCTGCCGCTCTCTCTATTCCAGTTATAGCAAATGGTGATGTTTTTGAATA</gDNA_template>
            <first_frame> R  T  L  P  R  R  R  S  S  I  A  T  T  P  I  L  R  R  G  W  S  P  P  A  G  K  I  L  P  L  F  S  S  Q   : G  I  A  L  T  Y  L  P  R  Q  N  D  G  L  Q  K  Q  A  S  L  G  S  N  G  P  S   : G  Y  I  A  V  *  A  A  C  C  P  I  W  S  *  H  N  L  W  R  G  D  Y  *  S  *  D  H  Q  M  *  A  A  S  *  W :   C  K  D  V  A  A  V  D  V  N  M  G  C  P  K  S  F  S  I  S  G  G  M  G  A  A  L  L  S  K  P  E  L  I  H  D  :  I  L  T  T  L  R  R  N  L  D  V  P  I  T  C  K  I  R  L  L  K  D  P  Q  D  T  V  E  L  A  R  R  I  E  M  T  G  V  S  A  L  A  V  H  G  R :   K  V  P  D  R  P  R  D  P  A  K  W  N  E  I  A  D  V  A  A  A  L  S  I  P  V  I  A  N  G  D  V  F  E   </first_frame>
            <second_frame>  G  P  F  R  G  A  A  R  Q  L  Q  P  L  R  Y  S  A  V  V  G  R  R  R  L  G  K  F  F  L  S  F  Q  V  K  :  A  S  H  *  L  I  C  L  V  R  M  M  D  Y  R  N  K  L  V  L  A  P  M  V  R  V  :  G  T  L  P  F  R  L  L  A  A  Q  Y  G  A  D  I  T  Y  G  E  E  I  I  D  H  K  I  I  K  C  E  R  R  V  N   : G  V  R  M  *  Q  Q  L  T  *  T  W  D  A  P  S  H  S  L  L  V  E  A  W  V  L  H  C  *  A  N  Q  S  S  S  M  I :   F  *  Q  H  C  E  G  T  W  M  Y  Q  *  H  A  K  L  G  Y  *  K  I  R  K  I  Q  W  N  W  H  D  E  L  R  *  L  V  S  L  L  L  L  S  M  E   : G  K  F  Q  I  G  Q  E  I  L  Q  S  G  M  R  L  L  M  L  L  P  L  S  L  F  Q  L  *  Q  M  V  M  F  L  N  </second_frame>
            <third_frame>   D  P  S  A  A  P  L  V  N  C  N  H  S  D  T  P  P  W  L  V  A  A  G  W  E  N  S  S  S  L  F  K  S  R :   H  R  T  N  L  S  A  S  S  E  *  W  I  T  E  T  S  *  S  W  L  Q  W  S  E  W :   V  H  C  R  L  G  C  L  L  P  N  M  E  L  T  *  P  M  E  R  R  L  L  I  I  R  S  S  N  V  S  G  E  L  M  :  V  *  G  C  S  S  S  *  R  K  H  G  M  P  Q  V  I  L  Y  *  W  R  H  G  C  C  T  V  E  Q  T  R  A  H  P  *   : Y  F  D  N  I  A  K  E  L  G  C  T  N  N  M  Q  N  *  V  I  K  R  S  A  R  Y  S  G  I  G  T  T  N  *  D  D  W  C  L  C  S  C  C  P  W  K  :  E  S  S  R  *  A  K  R  S  C  K  V  E  *  D  C  *  C  C  C  R  S  L  Y  S  S  Y  S  K  W  *  C  F  *  I </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0117B06.1" strand="-"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="75231" stop="75230"/>
                    <exon start="72351" stop="72243"/>
                    <exon start="72140" stop="72004"/>
                    <exon start="71252" stop="71150"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>351</number_coding_nucleotides>
                  <number_encoded_amino_acids>117</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>WCKDVAAVDVNMGCPKSFSISGGMGAALLSKPELIHDILTTLRRNLDVPITCKIRLLKDPQDTVELARRIEMTGVSALAVHGRKVPDRPRDPAKWNEIADVAAALSIPVIANGDVFE</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0117B06.1" strand="-"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="76549" stop="76447"/>
                    <exon start="75600" stop="75523"/>
                    <exon start="75335" stop="75319"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>195</number_coding_nucleotides>
                  <number_encoded_amino_acids>65</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RTLPRRRSSIATTPILRRGWSPPAGKILPLFSSQGIALTYLPRQNDGLQKQASLGSNGPSGYIAV*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="76530" e_stop="76447"/>
            <exon e_start="75600" e_stop="75523"/>
            <exon e_start="75335" e_stop="75230"/>
            <exon e_start="74096" e_stop="74013"/>
            <exon e_start="72351" e_stop="72243"/>
            <exon e_start="72140" e_stop="72073"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.985" e_score="0.976"/>
          <exon-intron don_prob="0.953" acc_prob="0.997" e_score="0.987"/>
          <exon-intron don_prob="0.991" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.985" e_score="1.000"/>
          <exon-intron don_prob="0.968" acc_prob="0.186" e_score="0.972"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.976">
            <gDNA_exon_boundary e_start="76530" e_stop="76447" e_length="84"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.985">
            <gDNA_intron_boundary i_start="76446" i_stop="75601" i_length="846"/>
          </intron>
          <exon e_serial="2" e_score="0.987">
            <gDNA_exon_boundary e_start="75600" e_stop="75523" e_length="78"/>
          </exon>
          <intron i_serial="2" don_prob="0.953" acc_prob="0.997">
            <gDNA_intron_boundary i_start="75522" i_stop="75336" i_length="187"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="75335" e_stop="75230" e_length="106"/>
          </exon>
          <intron i_serial="3" don_prob="0.991" acc_prob="0.000">
            <gDNA_intron_boundary i_start="75229" i_stop="74097" i_length="1133"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="74096" e_stop="74013" e_length="84"/>
          </exon>
          <intron i_serial="4" don_prob="0.999" acc_prob="0.985">
            <gDNA_intron_boundary i_start="74012" i_stop="72352" i_length="1661"/>
          </intron>
          <exon e_serial="5" e_score="0.972">
            <gDNA_exon_boundary e_start="72351" e_stop="72243" e_length="109"/>
          </exon>
          <intron i_serial="5" don_prob="0.968" acc_prob="0.186">
            <gDNA_intron_boundary i_start="72242" i_stop="72141" i_length="102"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="72140" e_stop="72073" e_length="68"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76530" stop="76447"/>
              <exon start="75600" stop="75523"/>
              <exon start="75335" stop="75230"/>
              <exon start="74096" stop="74013"/>
              <exon start="72351" stop="72243"/>
              <exon start="72140" stop="72073"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U338317" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GCTCGTCAATTGCAACCACTCCGATACTCCGCCGTGGTTGGTCGCCGCCGGCTGGGAAAATTCTTCCTCTCTTTTCAAGTCAAG : GCATCGCACTAACTTATCTGCCTCGTCAGAATGATGGATTACAGAAACAAGCTAGTCTTGGCTCCAATGGTCCGAGTG : GGTACATTGCCGTTTAGGCTGCTTGCTGCCCAATATGGAGCTGACATAACCTATGGAGAGGAGATTATTGATCATAAGATCATCAAATGTGAGCGGCGAGTTAATG : AACGTGCCCCGAGGAGAGAAATCGAGTTGTATTTCAGATGGGCACTTCTGATGCCATGAGGGCTCTCAAAGCTGCTGAAATAGT : GTGTAAGGATGTAGCAGCAGTTGACGTAAACATGGGATGCCCCAAGTCATTCTCTATTAGTGGAGGCATGGGTGCTGCACTGTTGAGCAAACCAGAGCTCATCCATGAT : ATTTTGACAACATTGCGAAGGAACTTGGATGTACCAATAACATGCAAAATTAGGTTATTAAAAGATCC</gDNA_template>
            <first_frame> A  R  Q  L  Q  P  L  R  Y  S  A  V  V  G  R  R  R  L  G  K  F  F  L  S  F  Q  V  K  :  A  S  H  *  L  I  C  L  V  R  M  M  D  Y  R  N  K  L  V  L  A  P  M  V  R  V  :  G  T  L  P  F  R  L  L  A  A  Q  Y  G  A  D  I  T  Y  G  E  E  I  I  D  H  K  I  I  K  C  E  R  R  V  N   : E  R  A  P  R  R  E  I  E  L  Y  F  R  W  A  L  L  M  P  *  G  L  S  K  L  L  K  *   : C  V  R  M  *  Q  Q  L  T  *  T  W  D  A  P  S  H  S  L  L  V  E  A  W  V  L  H  C  *  A  N  Q  S  S  S  M  I :   F  *  Q  H  C  E  G  T  W  M  Y  Q  *  H  A  K  L  G  Y  *  K  I  </first_frame>
            <second_frame>  L  V  N  C  N  H  S  D  T  P  P  W  L  V  A  A  G  W  E  N  S  S  S  L  F  K  S  R :   H  R  T  N  L  S  A  S  S  E  *  W  I  T  E  T  S  *  S  W  L  Q  W  S  E  W :   V  H  C  R  L  G  C  L  L  P  N  M  E  L  T  *  P  M  E  R  R  L  L  I  I  R  S  S  N  V  S  G  E  L  M  :  N  V  P  R  G  E  K  S  S  C  I  S  D  G  H  F  *  C  H  E  G  S  Q  S  C  *  N  S  :  V  *  G  C  S  S  S  *  R  K  H  G  M  P  Q  V  I  L  Y  *  W  R  H  G  C  C  T  V  E  Q  T  R  A  H  P  *   : Y  F  D  N  I  A  K  E  L  G  C  T  N  N  M  Q  N  *  V  I  K  R  S </second_frame>
            <third_frame>   S  S  I  A  T  T  P  I  L  R  R  G  W  S  P  P  A  G  K  I  L  P  L  F  S  S  Q   : G  I  A  L  T  Y  L  P  R  Q  N  D  G  L  Q  K  Q  A  S  L  G  S  N  G  P  S   : G  Y  I  A  V  *  A  A  C  C  P  I  W  S  *  H  N  L  W  R  G  D  Y  *  S  *  D  H  Q  M  *  A  A  S  *  * :   T  C  P  E  E  R  N  R  V  V  F  Q  M  G  T  S  D  A  M  R  A  L  K  A  A  E  I  V :   C  K  D  V  A  A  V  D  V  N  M  G  C  P  K  S  F  S  I  S  G  G  M  G  A  A  L  L  S  K  P  E  L  I  H  D  :  I  L  T  T  L  R  R  N  L  D  V  P  I  T  C  K  I  R  L  L  K  D   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0117B06.1" strand="-"/>
                <serials PGL_serial="12" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="74095" stop="74013"/>
                    <exon start="72351" stop="72243"/>
                    <exon start="72140" stop="72075"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>258</number_coding_nucleotides>
                  <number_encoded_amino_acids>86</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TCPEERNRVVFQMGTSDAMRALKAAEIVCKDVAAVDVNMGCPKSFSISGGMGAALLSKPELIHDILTTLRRNLDVPITCKIRLLKD</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0117B06.1" strand="-"/>
                <serials PGL_serial="12" AGS_serial="2" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="75588" stop="75523"/>
                    <exon start="75335" stop="75230"/>
                    <exon start="74096" stop="74038"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>228</number_coding_nucleotides>
                  <number_encoded_amino_acids>76</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LICLVRMMDYRNKLVLAPMVRVGTLPFRLLAAQYGADITYGEEIIDHKIIKCERRVNERAPRREIELYFRWALLMP*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="13" PGL_strand="-" PGL_start="101007" PGL_stop="100840"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="101007" e_stop="100840"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.970"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.970">
            <gDNA_exon_boundary e_start="101007" e_stop="100840" e_length="168"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="101007" stop="100840"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U343181" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TCAAGTAAAATAAGATTCGATGACTCTGATGAACATGAATCTTCATCTGAAGATGAGGAGGAGAAGGGGATTGAGGAGGAGCTTGCTGATGTGACCTTTGAAGAATTGCAGAGAGCACGGTCTGATGGATCAGCTACAGTGTATAGGAAGCTTAATTCGGAAGGAAAA</gDNA_template>
            <first_frame> S  S  K  I  R  F  D  D  S  D  E  H  E  S  S  S  E  D  E  E  E  K  G  I  E  E  E  L  A  D  V  T  F  E  E  L  Q  R  A  R  S  D  G  S  A  T  V  Y  R  K  L  N  S  E  G  K </first_frame>
            <second_frame>  Q  V  K  *  D  S  M  T  L  M  N  M  N  L  H  L  K  M  R  R  R  R  G  L  R  R  S  L  L  M  *  P  L  K  N  C  R  E  H  G  L  M  D  Q  L  Q  C  I  G  S  L  I  R  K  E   </second_frame>
            <third_frame>   K  *  N  K  I  R  *  L  *  *  T  *  I  F  I  *  R  *  G  G  E  G  D  *  G  G  A  C  *  C  D  L  *  R  I  A  E  S  T  V  *  W  I  S  Y  S  V  *  E  A  *  F  G  R  K  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C06HBa0117B06.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="14" PGL_strand="-" PGL_start="114196" PGL_stop="113852"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="114196" e_stop="113923"/>
            <exon e_start="113859" e_stop="113852"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.132" acc_prob="0.785" e_score="1.000"/>
          <exon-only e_score="0.625"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="114196" e_stop="113923" e_length="274"/>
          </exon>
          <intron i_serial="1" don_prob="0.132" acc_prob="0.785">
            <gDNA_intron_boundary i_start="113922" i_stop="113860" i_length="63"/>
          </intron>
          <exon e_serial="2" e_score="0.625">
            <gDNA_exon_boundary e_start="113859" e_stop="113852" e_length="8"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="114196" stop="113923"/>
              <exon start="113859" stop="113852"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U335173" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTCTTTTCAATAGTGTTGGTAAGTCAAGCAAGTCACAGACGGAATCCTCAGGTCCCGAGCCCATGATCGAAAGCTGAGAAGTTCATATTACTATCAAATTGGATGTAGACCAATTTGGTGCAATTTCTAGGTTTCTTTTTGCAGTTGACTATATACATCTTTGACTCTATTTGTGCAGCCTACAAAGAGGTGATAGTTTACGATGATTGGCTCTCTTAGATATCATGACTTTTGCTGTTCAATGTTATGGAAGATTTCGTCAAGTCTTTCACAA : GAAAAATC</gDNA_template>
            <first_frame> F  F  S  I  V  L  V  S  Q  A  S  H  R  R  N  P  Q  V  P  S  P  *  S  K  A  E  K  F  I  L  L  S  N  W  M  *  T  N  L  V  Q  F  L  G  F  F  L  Q  L  T  I  Y  I  F  D  S  I  C  A  A  Y  K  E  V  I  V  Y  D  D  W  L  S  *  I  S  *  L  L  L  F  N  V  M  E  D  F  V  K  S  F  T   : R  K  I </first_frame>
            <second_frame>  S  F  Q  *  C  W  *  V  K  Q  V  T  D  G  I  L  R  S  R  A  H  D  R  K  L  R  S  S  Y  Y  Y  Q  I  G  C  R  P  I  W  C  N  F  *  V  S  F  C  S  *  L  Y  T  S  L  T  L  F  V  Q  P  T  K  R  *  *  F  T  M  I  G  S  L  R  Y  H  D  F  C  C  S  M  L  W  K  I  S  S  S  L  S  Q  :  E  K   </second_frame>
            <third_frame>   L  F  N  S  V  G  K  S  S  K  S  Q  T  E  S  S  G  P  E  P  M  I  E  S  *  E  V  H  I  T  I  K  L  D  V  D  Q  F  G  A  I  S  R  F  L  F  A  V  D  Y  I  H  L  *  L  Y  L  C  S  L  Q  R  G  D  S  L  R  *  L  A  L  L  D  I  M  T  F  A  V  Q  C  Y  G  R  F  R  Q  V  F  H  K :   K  N  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C06HBa0117B06.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="15" PGL_strand="-" PGL_start="118534" PGL_stop="116789"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="118534" e_stop="118101"/>
            <exon e_start="117473" e_stop="117192"/>
            <exon e_start="117083" e_stop="116936"/>
            <exon e_start="116814" e_stop="116789"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.888" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.990" e_score="0.993"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="118534" e_stop="118101" e_length="434"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.888">
            <gDNA_intron_boundary i_start="118100" i_stop="117474" i_length="627"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="117473" e_stop="117192" e_length="282"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="117191" i_stop="117084" i_length="108"/>
          </intron>
          <exon e_serial="3" e_score="0.993">
            <gDNA_exon_boundary e_start="117083" e_stop="116936" e_length="148"/>
          </exon>
          <intron i_serial="3" don_prob="0.998" acc_prob="0.990">
            <gDNA_intron_boundary i_start="116935" i_stop="116815" i_length="121"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="116814" e_stop="116789" e_length="26"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="118534" stop="118101"/>
              <exon start="117473" stop="117192"/>
              <exon start="117083" stop="116936"/>
              <exon start="116814" stop="116789"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U315481" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CTGAAGTTACAATGGACTCTCTGAATTCTTACGCATCGTCGGCGGCGATGGCGCAGCAAACCTGGGAGTTAGAGAACAACATCGTAACAATCGACGCGCCGTCGGGGTCGAAACCGGAAAACTCCGCGTCGGACGCTATATTCCACTACGACGATGCGGCACAGACGAAGTTTCAGCGGGAGAAGCCGTGGGCGAGTGACCCTCACTACTTCAAGCGTGTGAAGATCTCTGCTCTTGCTCTTCTCAAGATGGTTGTTCACGCGCGTTCCGGAGGTACAATTGAGGTCATGGGACTCATGCAGGGTAAGACTGACGGCGATGCCATCATTGTAATGGACGCTTTTGCCCTCCCCGTTGAAGGCACTGAAACTAGGGTTAATGCTCAAGCTGATGCGTATGAATATATGGTCGAATATTCACAGACCAACAAGCAG : GCTGGTCGTTTGGAAAATGTGGTCGGGTGGTACCATTCCCATCCTGGTTATGGATGCTGGCTCTCTGGCATTGATGTATCTACCCAAATGCTCAACCAGCAATATCAGGAACCCTTTCTTGCAGTTGTTATTGATCCAACAAGAACTGTTTCTGCTGGAAAAGTTGAGATTGGTGCCTTTCGAACATATCCTGAAGGATATAAACCTCCAGATGACCCCATCTCGGAGTACCAGACCATTCCTTTGAACAAAATCGAAGACTTTGGAGTACATTGCAAGCAG : TATTATTCATTGGATATTACATATTTTAAGTCTTCTCTCGATTGTCGTCTCTTGGACCTACTATGGAACAAGTATTGGGTGAACACACTTTCATCATCTCCTTTGCTTGGAAATGGAGACTATGTTGCTGGACAGATATCTGATCTTG : CTGAAAAGTTGGAGCATGCTGAAAAT</gDNA_template>
            <first_frame> L  K  L  Q  W  T  L  *  I  L  T  H  R  R  R  R  W  R  S  K  P  G  S  *  R  T  T  S  *  Q  S  T  R  R  R  G  R  N  R  K  T  P  R  R  T  L  Y  S  T  T  T  M  R  H  R  R  S  F  S  G  R  S  R  G  R  V  T  L  T  T  S  S  V  *  R  S  L  L  L  L  F  S  R  W  L  F  T  R  V  P  E  V  Q  L  R  S  W  D  S  C  R  V  R  L  T  A  M  P  S  L  *  W  T  L  L  P  S  P  L  K  A  L  K  L  G  L  M  L  K  L  M  R  M  N  I  W  S  N  I  H  R  P  T  S  R :   L  V  V  W  K  M  W  S  G  G  T  I  P  I  L  V  M  D  A  G  S  L  A  L  M  Y  L  P  K  C  S  T  S  N  I  R  N  P  F  L  Q  L  L  L  I  Q  Q  E  L  F  L  L  E  K  L  R  L  V  P  F  E  H  I  L  K  D  I  N  L  Q  M  T  P  S  R  S  T  R  P  F  L  *  T  K  S  K  T  L  E  Y  I  A  S  S :   I  I  H  W  I  L  H  I  L  S  L  L  S  I  V  V  S  W  T  Y  Y  G  T  S  I  G  *  T  H  F  H  H  L  L  C  L  E  M  E  T  M  L  L  D  R  Y  L  I  L  :  L  K  S  W  S  M  L  K   </first_frame>
            <second_frame>  *  S  Y  N  G  L  S  E  F  L  R  I  V  G  G  D  G  A  A  N  L  G  V  R  E  Q  H  R  N  N  R  R  A  V  G  V  E  T  G  K  L  R  V  G  R  Y  I  P  L  R  R  C  G  T  D  E  V  S  A  G  E  A  V  G  E  *  P  S  L  L  Q  A  C  E  D  L  C  S  C  S  S  Q  D  G  C  S  R  A  F  R  R  Y  N  *  G  H  G  T  H  A  G  *  D  *  R  R  C  H  H  C  N  G  R  F  C  P  P  R  *  R  H  *  N  *  G  *  C  S  S  *  C  V  *  I  Y  G  R  I  F  T  D  Q  Q  A   : G  W  S  F  G  K  C  G  R  V  V  P  F  P  S  W  L  W  M  L  A  L  W  H  *  C  I  Y  P  N  A  Q  P  A  I  S  G  T  L  S  C  S  C  Y  *  S  N  K  N  C  F  C  W  K  S  *  D  W  C  L  S  N  I  S  *  R  I  *  T  S  R  *  P  H  L  G  V  P  D  H  S  F  E  Q  N  R  R  L  W  S  T  L  Q  A   : V  L  F  I  G  Y  Y  I  F  *  V  F  S  R  L  S  S  L  G  P  T  M  E  Q  V  L  G  E  H  T  F  I  I  S  F  A  W  K  W  R  L  C  C  W  T  D  I  *  S  C :   *  K  V  G  A  C  *  K  </second_frame>
            <third_frame>   E  V  T  M  D  S  L  N  S  Y  A  S  S  A  A  M  A  Q  Q  T  W  E  L  E  N  N  I  V  T  I  D  A  P  S  G  S  K  P  E  N  S  A  S  D  A  I  F  H  Y  D  D  A  A  Q  T  K  F  Q  R  E  K  P  W  A  S  D  P  H  Y  F  K  R  V  K  I  S  A  L  A  L  L  K  M  V  V  H  A  R  S  G  G  T  I  E  V  M  G  L  M  Q  G  K  T  D  G  D  A  I  I  V  M  D  A  F  A  L  P  V  E  G  T  E  T  R  V  N  A  Q  A  D  A  Y  E  Y  M  V  E  Y  S  Q  T  N  K  Q  :  A  G  R  L  E  N  V  V  G  W  Y  H  S  H  P  G  Y  G  C  W  L  S  G  I  D  V  S  T  Q  M  L  N  Q  Q  Y  Q  E  P  F  L  A  V  V  I  D  P  T  R  T  V  S  A  G  K  V  E  I  G  A  F  R  T  Y  P  E  G  Y  K  P  P  D  D  P  I  S  E  Y  Q  T  I  P  L  N  K  I  E  D  F  G  V  H  C  K  Q  :  Y  Y  S  L  D  I  T  Y  F  K  S  S  L  D  C  R  L  L  D  L  L  W  N  K  Y  W  V  N  T  L  S  S  S  P  L  L  G  N  G  D  Y  V  A  G  Q  I  S  D  L   : A  E  K  L  E  H  A  E  N </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0117B06.1" strand="-"/>
                <serials PGL_serial="15" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="118532" stop="118101"/>
                    <exon start="117473" stop="117192"/>
                    <exon start="117083" stop="116936"/>
                    <exon start="116814" stop="116789"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>888</number_coding_nucleotides>
                  <number_encoded_amino_acids>296</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EVTMDSLNSYASSAAMAQQTWELENNIVTIDAPSGSKPENSASDAIFHYDDAAQTKFQREKPWASDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVEYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQYQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDDPISEYQTIPLNKIEDFGVHCKQYYSLDITYFKSSLDCRLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEHAEN</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="16" PGL_strand="-" PGL_start="123109" PGL_stop="120482"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="123109" e_stop="122428"/>
            <exon e_start="121682" e_stop="121592"/>
            <exon e_start="120627" e_stop="120482"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.994" acc_prob="0.983" e_score="0.999"/>
          <exon-intron don_prob="0.997" acc_prob="0.995" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.999">
            <gDNA_exon_boundary e_start="123109" e_stop="122428" e_length="682"/>
          </exon>
          <intron i_serial="1" don_prob="0.994" acc_prob="0.983">
            <gDNA_intron_boundary i_start="122427" i_stop="121683" i_length="745"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="121682" e_stop="121592" e_length="91"/>
          </exon>
          <intron i_serial="2" don_prob="0.997" acc_prob="0.995">
            <gDNA_intron_boundary i_start="121591" i_stop="120628" i_length="964"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="120627" e_stop="120482" e_length="146"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="123109" stop="122428"/>
              <exon start="121682" stop="121592"/>
              <exon start="120627" stop="120482"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U345157" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="16" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TATCTTTCTGATCTTCCTCAGAATTGCAAGTCAGATCCTAATATCTCATACAGCCAAGCAGAAAGTGTCGGCGAGATAAACCAAAGTGATTTTCAGTCACCAATCACTGCTAGTCGAGATGATGGTTTATCCTCTCTGGTTTCATCCAAACACAAGTTGAGCGTCAAGATTGAGTCAATGTATACCGATGGAGTAGATTCAATTTATTCCAATTGGTTTGACAATTCCTCATCATTCTTAGAATCAAAAGCTTCTGAAGTCACAAAGAGTATGAGTGGTAAAGATATCCATTTAAGAAACATAGGCCATCAAGAAGGAAGGGATTCATGCTCATCTTTTTCAACCAGAGATCAAAATAGTTTTGCTACACATTTCTCACCTAATGAAGTATCAGGCAGGAATAATATGGAGGAAAAAGTAACTGTCGGGGACTTGGGATGTACACCACCAAAATTTACATCGTCGAAGTGTTCAGAAGAAAAAAGCGTATCACTTCACAGGCAAAACTTGAGTAGAAATCAGTATCTTCTTATCCAGGAAGGTTCTGATGAAACAAGTGTGGTTGCTTATAGTCTTGTCGGCTGTATTTTAAATAAGTTCGCTCAGATGGATGGGTTACAGTTATCTGAGGACAATGTATCATATCTCCAAGGCAACACTTCAGATCCCAAAATTTTTGAAG : TTCTCAAGAACAGGCGAAGTTCTTGTGGTGAGACCACTAATTCCATTATGCTCCATGCTCTTGAAGAGATAATTCCTTCTTTTGCAAACAG : TAGTAAAGAACAACTGAAGGAGTTGTTGGATGTGGAGTAGCCTCTGAAGCCTCGAGGCATTGATTGGAGCATAGCTCAAGATCTCAATTACGTAGAGGCTTTGCTAGATTTTGTTGGTGACGATATCTAGCAAGGACAACGGTTTC</gDNA_template>
            <first_frame> Y  L  S  D  L  P  Q  N  C  K  S  D  P  N  I  S  Y  S  Q  A  E  S  V  G  E  I  N  Q  S  D  F  Q  S  P  I  T  A  S  R  D  D  G  L  S  S  L  V  S  S  K  H  K  L  S  V  K  I  E  S  M  Y  T  D  G  V  D  S  I  Y  S  N  W  F  D  N  S  S  S  F  L  E  S  K  A  S  E  V  T  K  S  M  S  G  K  D  I  H  L  R  N  I  G  H  Q  E  G  R  D  S  C  S  S  F  S  T  R  D  Q  N  S  F  A  T  H  F  S  P  N  E  V  S  G  R  N  N  M  E  E  K  V  T  V  G  D  L  G  C  T  P  P  K  F  T  S  S  K  C  S  E  E  K  S  V  S  L  H  R  Q  N  L  S  R  N  Q  Y  L  L  I  Q  E  G  S  D  E  T  S  V  V  A  Y  S  L  V  G  C  I  L  N  K  F  A  Q  M  D  G  L  Q  L  S  E  D  N  V  S  Y  L  Q  G  N  T  S  D  P  K  I  F  E   : V  L  K  N  R  R  S  S  C  G  E  T  T  N  S  I  M  L  H  A  L  E  E  I  I  P  S  F  A  N  S :   S  K  E  Q  L  K  E  L  L  D  V  E  *  P  L  K  P  R  G  I  D  W  S  I  A  Q  D  L  N  Y  V  E  A  L  L  D  F  V  G  D  D  I  *  Q  G  Q  R  F  </first_frame>
            <second_frame>  I  F  L  I  F  L  R  I  A  S  Q  I  L  I  S  H  T  A  K  Q  K  V  S  A  R  *  T  K  V  I  F  S  H  Q  S  L  L  V  E  M  M  V  Y  P  L  W  F  H  P  N  T  S  *  A  S  R  L  S  Q  C  I  P  M  E  *  I  Q  F  I  P  I  G  L  T  I  P  H  H  S  *  N  Q  K  L  L  K  S  Q  R  V  *  V  V  K  I  S  I  *  E  T  *  A  I  K  K  E  G  I  H  A  H  L  F  Q  P  E  I  K  I  V  L  L  H  I  S  H  L  M  K  Y  Q  A  G  I  I  W  R  K  K  *  L  S  G  T  W  D  V  H  H  Q  N  L  H  R  R  S  V  Q  K  K  K  A  Y  H  F  T  G  K  T  *  V  E  I  S  I  F  L  S  R  K  V  L  M  K  Q  V  W  L  L  I  V  L  S  A  V  F  *  I  S  S  L  R  W  M  G  Y  S  Y  L  R  T  M  Y  H  I  S  K  A  T  L  Q  I  P  K  F  L  K  :  F  S  R  T  G  E  V  L  V  V  R  P  L  I  P  L  C  S  M  L  L  K  R  *  F  L  L  L  Q  T   : V  V  K  N  N  *  R  S  C  W  M  W  S  S  L  *  S  L  E  A  L  I  G  A  *  L  K  I  S  I  T  *  R  L  C  *  I  L  L  V  T  I  S  S  K  D  N  G  F </second_frame>
            <third_frame>   S  F  *  S  S  S  E  L  Q  V  R  S  *  Y  L  I  Q  P  S  R  K  C  R  R  D  K  P  K  *  F  S  V  T  N  H  C  *  S  R  *  W  F  I  L  S  G  F  I  Q  T  Q  V  E  R  Q  D  *  V  N  V  Y  R  W  S  R  F  N  L  F  Q  L  V  *  Q  F  L  I  I  L  R  I  K  S  F  *  S  H  K  E  Y  E  W  *  R  Y  P  F  K  K  H  R  P  S  R  R  K  G  F  M  L  I  F  F  N  Q  R  S  K  *  F  C  Y  T  F  L  T  *  *  S  I  R  Q  E  *  Y  G  G  K  S  N  C  R  G  L  G  M  Y  T  T  K  I  Y  I  V  E  V  F  R  R  K  K  R  I  T  S  Q  A  K  L  E  *  K  S  V  S  S  Y  P  G  R  F  *  *  N  K  C  G  C  L  *  S  C  R  L  Y  F  K  *  V  R  S  D  G  W  V  T  V  I  *  G  Q  C  I  I  S  P  R  Q  H  F  R  S  Q  N  F  *  S :   S  Q  E  Q  A  K  F  L  W  *  D  H  *  F  H  Y  A  P  C  S  *  R  D  N  S  F  F  C  K  Q  :  *  *  R  T  T  E  G  V  V  G  C  G  V  A  S  E  A  S  R  H  *  L  E  H  S  S  R  S  Q  L  R  R  G  F  A  R  F  C  W  *  R  Y  L  A  R  T  T  V   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0117B06.1" strand="-"/>
                <serials PGL_serial="16" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="123109" stop="122428"/>
                    <exon start="121682" stop="121592"/>
                    <exon start="120627" stop="120588"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>810</number_coding_nucleotides>
                  <number_encoded_amino_acids>270</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>YLSDLPQNCKSDPNISYSQAESVGEINQSDFQSPITASRDDGLSSLVSSKHKLSVKIESMYTDGVDSIYSNWFDNSSSFLESKASEVTKSMSGKDIHLRNIGHQEGRDSCSSFSTRDQNSFATHFSPNEVSGRNNMEEKVTVGDLGCTPPKFTSSKCSEEKSVSLHRQNLSRNQYLLIQEGSDETSVVAYSLVGCILNKFAQMDGLQLSEDNVSYLQGNTSDPKIFEVLKNRRSSCGETTNSIMLHALEEIIPSFANSSKEQLKELLDVE*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="17" PGL_strand="-" PGL_start="124192" PGL_stop="123579"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="124192" e_stop="123579"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="124192" e_stop="123579" e_length="614"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="124192" stop="123579"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U331958" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="17" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GCATTTGGAGTGCATAAGGGTGAAACGACATACCATGGTGGACCAGCAACATTGTTCTTTGATTCAACTGAGAATTTGAGAGGCGTATATTCCATGCTTGATAAGATGAACAACAAGGGGTTATGCTGTATTGCTGAGACTGTAACTGGATGCTCGATTTCTTTTGAGAAAACCAATTGGCAAATGAAAAGGATAATCAAGCAGTTTCTTCCCAAAATTCTCCATAAGCATGATGATTCCAGTCAAAGTCGAATTAAAAAAATTTCTCAACTCCTCAAAGATCCTCAAAACTTTCGTGTTAATCACGGGGCTTCTTGTTCTACCTCAGAATCCTTTCGCAGTTCTGCTATTTATGTTCTGGATAGACTTGAAGAGTTGTCTCTTCTTACTTTGAGTAAAATGCATAGGAATCTGAGGGATGTCACAGGTTACATCCCTTTACTGCAGCCTCCTCGAATATGTTGGAGTATTGGAAGTTTAGTTGAACAAATCAGGAGGACTTCGTTAAAAATGTTATCGGACTACGAAGAAGGGGATGAACCACCAGAACCCCTGGCTAAGGCTTTGTCCGTAGCAGCCTTAATGCTAAAACCAGAACTTGATTATTGTCTCTC</gDNA_template>
            <first_frame> A  F  G  V  H  K  G  E  T  T  Y  H  G  G  P  A  T  L  F  F  D  S  T  E  N  L  R  G  V  Y  S  M  L  D  K  M  N  N  K  G  L  C  C  I  A  E  T  V  T  G  C  S  I  S  F  E  K  T  N  W  Q  M  K  R  I  I  K  Q  F  L  P  K  I  L  H  K  H  D  D  S  S  Q  S  R  I  K  K  I  S  Q  L  L  K  D  P  Q  N  F  R  V  N  H  G  A  S  C  S  T  S  E  S  F  R  S  S  A  I  Y  V  L  D  R  L  E  E  L  S  L  L  T  L  S  K  M  H  R  N  L  R  D  V  T  G  Y  I  P  L  L  Q  P  P  R  I  C  W  S  I  G  S  L  V  E  Q  I  R  R  T  S  L  K  M  L  S  D  Y  E  E  G  D  E  P  P  E  P  L  A  K  A  L  S  V  A  A  L  M  L  K  P  E  L  D  Y  C  L   </first_frame>
            <second_frame>  H  L  E  C  I  R  V  K  R  H  T  M  V  D  Q  Q  H  C  S  L  I  Q  L  R  I  *  E  A  Y  I  P  C  L  I  R  *  T  T  R  G  Y  A  V  L  L  R  L  *  L  D  A  R  F  L  L  R  K  P  I  G  K  *  K  G  *  S  S  S  F  F  P  K  F  S  I  S  M  M  I  P  V  K  V  E  L  K  K  F  L  N  S  S  K  I  L  K  T  F  V  L  I  T  G  L  L  V  L  P  Q  N  P  F  A  V  L  L  F  M  F  W  I  D  L  K  S  C  L  F  L  L  *  V  K  C  I  G  I  *  G  M  S  Q  V  T  S  L  Y  C  S  L  L  E  Y  V  G  V  L  E  V  *  L  N  K  S  G  G  L  R  *  K  C  Y  R  T  T  K  K  G  M  N  H  Q  N  P  W  L  R  L  C  P  *  Q  P  *  C  *  N  Q  N  L  I  I  V  S  </second_frame>
            <third_frame>   I  W  S  A  *  G  *  N  D  I  P  W  W  T  S  N  I  V  L  *  F  N  *  E  F  E  R  R  I  F  H  A  *  *  D  E  Q  Q  G  V  M  L  Y  C  *  D  C  N  W  M  L  D  F  F  *  E  N  Q  L  A  N  E  K  D  N  Q  A  V  S  S  Q  N  S  P  *  A  *  *  F  Q  S  K  S  N  *  K  N  F  S  T  P  Q  R  S  S  K  L  S  C  *  S  R  G  F  L  F  Y  L  R  I  L  S  Q  F  C  Y  L  C  S  G  *  T  *  R  V  V  S  S  Y  F  E  *  N  A  *  E  S  E  G  C  H  R  L  H  P  F  T  A  A  S  S  N  M  L  E  Y  W  K  F  S  *  T  N  Q  E  D  F  V  K  N  V  I  G  L  R  R  R  G  *  T  T  R  T  P  G  *  G  F  V  R  S  S  L  N  A  K  T  R  T  *  L  L  S  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0117B06.1" strand="-"/>
                <serials PGL_serial="17" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="124192" stop="123581"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>612</number_coding_nucleotides>
                  <number_encoded_amino_acids>204</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>AFGVHKGETTYHGGPATLFFDSTENLRGVYSMLDKMNNKGLCCIAETVTGCSISFEKTNWQMKRIIKQFLPKILHKHDDSSQSRIKKISQLLKDPQNFRVNHGASCSTSESFRSSAIYVLDRLEELSLLTLSKMHRNLRDVTGYIPLLQPPRICWSIGSLVEQIRRTSLKMLSDYEEGDEPPEPLAKALSVAALMLKPELDYCL</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="18" PGL_strand="-" PGL_start="137217" PGL_stop="134265"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="137217" e_stop="136868"/>
            <exon e_start="136731" e_stop="136484"/>
            <exon e_start="135136" e_stop="134812"/>
            <exon e_start="134682" e_stop="134265"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.968" acc_prob="1.000" e_score="0.966"/>
          <exon-intron don_prob="1.000" acc_prob="0.911" e_score="0.992"/>
          <exon-intron don_prob="1.000" acc_prob="0.993" e_score="1.000"/>
          <exon-only e_score="0.988"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.966">
            <gDNA_exon_boundary e_start="137217" e_stop="136868" e_length="350"/>
          </exon>
          <intron i_serial="1" don_prob="0.968" acc_prob="1.000">
            <gDNA_intron_boundary i_start="136867" i_stop="136732" i_length="136"/>
          </intron>
          <exon e_serial="2" e_score="0.992">
            <gDNA_exon_boundary e_start="136731" e_stop="136484" e_length="248"/>
          </exon>
          <intron i_serial="2" don_prob="1.000" acc_prob="0.911">
            <gDNA_intron_boundary i_start="136483" i_stop="135137" i_length="1347"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="135136" e_stop="134812" e_length="325"/>
          </exon>
          <intron i_serial="3" don_prob="1.000" acc_prob="0.993">
            <gDNA_intron_boundary i_start="134811" i_stop="134683" i_length="129"/>
          </intron>
          <exon e_serial="4" e_score="0.988">
            <gDNA_exon_boundary e_start="134682" e_stop="134265" e_length="418"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="137217" stop="136868"/>
              <exon start="136731" stop="136484"/>
              <exon start="135136" stop="134812"/>
              <exon start="134682" stop="134265"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U322751" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="18" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TAATTAACATTATCGTGATTTGGTTCACGTGAAAAAAACCAAGCCCACAATATCTAAAATATGTATATATATATTAGCTACTTTAAGCTTCAATGACATTTTAGTTCTTGTATTATTACATCTCTATTTTTGTGTTCTTAAACATGATGACAACAACAAGTGTTCTTTCTAGTGGATTCAACCACTCAACCCTCCCTCAATCTTACGTTCGACCTGAATCTCAAAGACCTTGCATGTCTGAAGTTGTTGATAGCGACGATCTTGTCCCAGTCATTGATATGTCTTGTACTGATAGGAACGTTATCGTTCATCAAATCGGTGAAGCTTGTCGTCTTTATGGGTTTTTTCAG : GTGATAAATCACGGTGTGTCGAAGAAGGCGATGGATGAAATGTTAGGGGTAAGTCATGAATTTTTTAAGCTACCAGTTGAAGAAAAGATGAAATTGTATTCTGATGATCCATCTAAGACTATGAGATTATCAACTAGTTTTAATGTTAAGAAGGAAACTGTTCATAATTGGAGAGATTATCTTAGGCTACATTGTTATCCTTTGGACAAATATGCCCCTGAATGGCCTTCTAATCCTCCTTCTTTCAG : GGAAATAGTAAGCAAATATTGCATGGAAGTTAGAGAGCTTGGATATAGATTGGAAGAAGCAATATCAGAGAGCTTAGGGCTTGAGAAGGATTGTATAAAAAATGTGTTAGGTGAACAAGGACAACATATGGCTATCAATTTTTATCCTCAGTGTCCACAACCTGAATTAACTTATGGGTTACCAGCCCATACAGATCCAAATGCAATTACAATTCTTCTTCAAGATTTGCAAGTGGCTGGCCTTCAAGTTCTTAAGGATGGAAAATGGTTATCTATTAAACCTCAGCCTAATGCCTTTGTCATCAATCTTGGTGATCAATTGGAG : GCGTTGAGTAATGGGAAGTATAAAAGTATATGGCATAGAGCTATTGTAAATTCAGACAAAGCAAGGATGTCTGTGGCTTCTTTTCTCTGTCCCAATGATTGTTCCATTATCAGTGCTCCAAAAACCTTAACTGAAGATGGATCTTCTGCAATTTATCGAGATTTCACTTATGCTGAATATTATGAAAAATTCTGGAGCAGGAATTTAGATCAGGAATATTGTTTAGAACTTTTTAAGAACGATGGAACCTAGTACTTGTATGAGTTTATTACTTTTGTATCGACCTAAGTGTGGTTGTCACACAATTATGTTAGGAAACAATCACTTGATATAGTTCAGATATGAAATTCGCAAAAAAAAAAATGATACTTCAAGTATGTAAAACTTTTTTTGTTCTTTTTCTCTGGCATTATCATCT</gDNA_template>
            <first_frame> *  L  T  L  S  *  F  G  S  R  E  K  N  Q  A  H  N  I  *  N  M  Y  I  Y  I  S  Y  F  K  L  Q  *  H  F  S  S  C  I  I  T  S  L  F  L  C  S  *  T  *  *  Q  Q  Q  V  F  F  L  V  D  S  T  T  Q  P  S  L  N  L  T  F  D  L  N  L  K  D  L  A  C  L  K  L  L  I  A  T  I  L  S  Q  S  L  I  C  L  V  L  I  G  T  L  S  F  I  K  S  V  K  L  V  V  F  M  G  F  F  R :   *  *  I  T  V  C  R  R  R  R  W  M  K  C  *  G  *  V  M  N  F  L  S  Y  Q  L  K  K  R  *  N  C  I  L  M  I  H  L  R  L  *  D  Y  Q  L  V  L  M  L  R  R  K  L  F  I  I  G  E  I  I  L  G  Y  I  V  I  L  W  T  N  M  P  L  N  G  L  L  I  L  L  L  S   : G  K  *  *  A  N  I  A  W  K  L  E  S  L  D  I  D  W  K  K  Q  Y  Q  R  A  *  G  L  R  R  I  V  *  K  M  C  *  V  N  K  D  N  I  W  L  S  I  F  I  L  S  V  H  N  L  N  *  L  M  G  Y  Q  P  I  Q  I  Q  M  Q  L  Q  F  F  F  K  I  C  K  W  L  A  F  K  F  L  R  M  E  N  G  Y  L  L  N  L  S  L  M  P  L  S  S  I  L  V  I  N  W  R :   R  *  V  M  G  S  I  K  V  Y  G  I  E  L  L  *  I  Q  T  K  Q  G  C  L  W  L  L  F  S  V  P  M  I  V  P  L  S  V  L  Q  K  P  *  L  K  M  D  L  L  Q  F  I  E  I  S  L  M  L  N  I  M  K  N  S  G  A  G  I  *  I  R  N  I  V  *  N  F  L  R  T  M  E  P  S  T  C  M  S  L  L  L  L  Y  R  P  K  C  G  C  H  T  I  M  L  G  N  N  H  L  I  *  F  R  Y  E  I  R  K  K  K  N  D  T  S  S  M  *  N  F  F  C  S  F  S  L  A  L  S  S </first_frame>
            <second_frame>  N  *  H  Y  R  D  L  V  H  V  K  K  T  K  P  T  I  S  K  I  C  I  Y  I  L  A  T  L  S  F  N  D  I  L  V  L  V  L  L  H  L  Y  F  C  V  L  K  H  D  D  N  N  K  C  S  F  *  W  I  Q  P  L  N  P  P  S  I  L  R  S  T  *  I  S  K  T  L  H  V  *  S  C  *  *  R  R  S  C  P  S  H  *  Y  V  L  Y  *  *  E  R  Y  R  S  S  N  R  *  S  L  S  S  L  W  V  F  S   : G  D  K  S  R  C  V  E  E  G  D  G  *  N  V  R  G  K  S  *  I  F  *  A  T  S  *  R  K  D  E  I  V  F  *  *  S  I  *  D  Y  E  I  I  N  *  F  *  C  *  E  G  N  C  S  *  L  E  R  L  S  *  A  T  L  L  S  F  G  Q  I  C  P  *  M  A  F  *  S  S  F  F  Q  :  G  N  S  K  Q  I  L  H  G  S  *  R  A  W  I  *  I  G  R  S  N  I  R  E  L  R  A  *  E  G  L  Y  K  K  C  V  R  *  T  R  T  T  Y  G  Y  Q  F  L  S  S  V  S  T  T  *  I  N  L  W  V  T  S  P  Y  R  S  K  C  N  Y  N  S  S  S  R  F  A  S  G  W  P  S  S  S  *  G  W  K  M  V  I  Y  *  T  S  A  *  C  L  C  H  Q  S  W  *  S  I  G   : G  V  E  *  W  E  V  *  K  Y  M  A  *  S  Y  C  K  F  R  Q  S  K  D  V  C  G  F  F  S  L  S  Q  *  L  F  H  Y  Q  C  S  K  N  L  N  *  R  W  I  F  C  N  L  S  R  F  H  L  C  *  I  L  *  K  I  L  E  Q  E  F  R  S  G  I  L  F  R  T  F  *  E  R  W  N  L  V  L  V  *  V  Y  Y  F  C  I  D  L  S  V  V  V  T  Q  L  C  *  E  T  I  T  *  Y  S  S  D  M  K  F  A  K  K  K  M  I  L  Q  V  C  K  T  F  F  V  L  F  L  W  H  Y  H   </second_frame>
            <third_frame>   I  N  I  I  V  I  W  F  T  *  K  K  P  S  P  Q  Y  L  K  Y  V  Y  I  Y  *  L  L  *  A  S  M  T  F  *  F  L  Y  Y  Y  I  S  I  F  V  F  L  N  M  M  T  T  T  S  V  L  S  S  G  F  N  H  S  T  L  P  Q  S  Y  V  R  P  E  S  Q  R  P  C  M  S  E  V  V  D  S  D  D  L  V  P  V  I  D  M  S  C  T  D  R  N  V  I  V  H  Q  I  G  E  A  C  R  L  Y  G  F  F  Q  :  V  I  N  H  G  V  S  K  K  A  M  D  E  M  L  G  V  S  H  E  F  F  K  L  P  V  E  E  K  M  K  L  Y  S  D  D  P  S  K  T  M  R  L  S  T  S  F  N  V  K  K  E  T  V  H  N  W  R  D  Y  L  R  L  H  C  Y  P  L  D  K  Y  A  P  E  W  P  S  N  P  P  S  F  R :   E  I  V  S  K  Y  C  M  E  V  R  E  L  G  Y  R  L  E  E  A  I  S  E  S  L  G  L  E  K  D  C  I  K  N  V  L  G  E  Q  G  Q  H  M  A  I  N  F  Y  P  Q  C  P  Q  P  E  L  T  Y  G  L  P  A  H  T  D  P  N  A  I  T  I  L  L  Q  D  L  Q  V  A  G  L  Q  V  L  K  D  G  K  W  L  S  I  K  P  Q  P  N  A  F  V  I  N  L  G  D  Q  L  E  :  A  L  S  N  G  K  Y  K  S  I  W  H  R  A  I  V  N  S  D  K  A  R  M  S  V  A  S  F  L  C  P  N  D  C  S  I  I  S  A  P  K  T  L  T  E  D  G  S  S  A  I  Y  R  D  F  T  Y  A  E  Y  Y  E  K  F  W  S  R  N  L  D  Q  E  Y  C  L  E  L  F  K  N  D  G  T  *  Y  L  Y  E  F  I  T  F  V  S  T  *  V  W  L  S  H  N  Y  V  R  K  Q  S  L  D  I  V  Q  I  *  N  S  Q  K  K  K  *  Y  F  K  Y  V  K  L  F  L  F  F  F  S  G  I  I  I  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0117B06.1" strand="-"/>
                <serials PGL_serial="18" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="137113" stop="136868"/>
                    <exon start="136731" stop="136484"/>
                    <exon start="135136" stop="134812"/>
                    <exon start="134682" stop="134431"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1068</number_coding_nucleotides>
                  <number_encoded_amino_acids>356</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FLYYYISIFVFLNMMTTTSVLSSGFNHSTLPQSYVRPESQRPCMSEVVDSDDLVPVIDMSCTDRNVIVHQIGEACRLYGFFQVINHGVSKKAMDEMLGVSHEFFKLPVEEKMKLYSDDPSKTMRLSTSFNVKKETVHNWRDYLRLHCYPLDKYAPEWPSNPPSFREIVSKYCMEVRELGYRLEEAISESLGLEKDCIKNVLGEQGQHMAINFYPQCPQPELTYGLPAHTDPNAITILLQDLQVAGLQVLKDGKWLSIKPQPNAFVINLGDQLEALSNGKYKSIWHRAIVNSDKARMSVASFLCPNDCSIISAPKTLTEDGSSAIYRDFTYAEYYEKFWSRNLDQEYCLELFKNDGT*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="135240" e_stop="134537"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.996"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.996">
            <gDNA_exon_boundary e_start="135240" e_stop="134537" e_length="704"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="135240" stop="134537"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U337680" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="18" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TGACGTATGAGTTTAATTAATGTTCTCACCATTCATTTTTTTTAAGTCGATCGATTAAATCGAAATAGAAATCTAATTATTGCTCTTTGAATTATATTGTTTAGGGAAATAGTAAGCAAATATTGCATGGAAGTTAGAGAGCTTGGATATAGATTGGAAGAAGCAATATCAGAGAGCTTAGGGCTTGAGAAGGATTGTATAAAAAATGTGTTAGGTGAACAAGGACAACATATGGCTATCAATTTTTATCCTCAGTGTCCACAACCTGAATTAACTTATGGGTTACCAGCCCATACAGATCCAAATGCAATTACAATTCTTCTTCAAGATTTGCAAGTGGCTGGCCTTCAAGTTCTTAAGGATGGAAAATGGTTATCTATTAAACCTCAGCCTAATGCCTTTGTCATCAATCTTGGTGATCAATTGGAGGTAAACACGTCTTTCTCTGTTTCTGTTTCAATTTATGTGATATCAGACTTGCACATCGTCTGAAAATACAACTAATTAGATAAAAGAGTATAAACTTTTAGATGAAATAATTATTTATCGTGTGTGCAGGCGTTGAGTAATGGGAAGTATAAAAGTATATGGCATAGAGCTATTGTAAATTCAGACAAAGCAAGGATGTCTGTGGCTTCTTTTCTCTGTCCCAATGATTGTTCCATTATCAGTGCTCCAAAAACCTTAACTGAAGATGGATCTTC</gDNA_template>
            <first_frame> *  R  M  S  L  I  N  V  L  T  I  H  F  F  *  V  D  R  L  N  R  N  R  N  L  I  I  A  L  *  I  I  L  F  R  E  I  V  S  K  Y  C  M  E  V  R  E  L  G  Y  R  L  E  E  A  I  S  E  S  L  G  L  E  K  D  C  I  K  N  V  L  G  E  Q  G  Q  H  M  A  I  N  F  Y  P  Q  C  P  Q  P  E  L  T  Y  G  L  P  A  H  T  D  P  N  A  I  T  I  L  L  Q  D  L  Q  V  A  G  L  Q  V  L  K  D  G  K  W  L  S  I  K  P  Q  P  N  A  F  V  I  N  L  G  D  Q  L  E  V  N  T  S  F  S  V  S  V  S  I  Y  V  I  S  D  L  H  I  V  *  K  Y  N  *  L  D  K  R  V  *  T  F  R  *  N  N  Y  L  S  C  V  Q  A  L  S  N  G  K  Y  K  S  I  W  H  R  A  I  V  N  S  D  K  A  R  M  S  V  A  S  F  L  C  P  N  D  C  S  I  I  S  A  P  K  T  L  T  E  D  G  S   </first_frame>
            <second_frame>  D  V  *  V  *  L  M  F  S  P  F  I  F  F  K  S  I  D  *  I  E  I  E  I  *  L  L  L  F  E  L  Y  C  L  G  K  *  *  A  N  I  A  W  K  L  E  S  L  D  I  D  W  K  K  Q  Y  Q  R  A  *  G  L  R  R  I  V  *  K  M  C  *  V  N  K  D  N  I  W  L  S  I  F  I  L  S  V  H  N  L  N  *  L  M  G  Y  Q  P  I  Q  I  Q  M  Q  L  Q  F  F  F  K  I  C  K  W  L  A  F  K  F  L  R  M  E  N  G  Y  L  L  N  L  S  L  M  P  L  S  S  I  L  V  I  N  W  R  *  T  R  L  S  L  F  L  F  Q  F  M  *  Y  Q  T  C  T  S  S  E  N  T  T  N  *  I  K  E  Y  K  L  L  D  E  I  I  I  Y  R  V  C  R  R  *  V  M  G  S  I  K  V  Y  G  I  E  L  L  *  I  Q  T  K  Q  G  C  L  W  L  L  F  S  V  P  M  I  V  P  L  S  V  L  Q  K  P  *  L  K  M  D  L  </second_frame>
            <third_frame>   T  Y  E  F  N  *  C  S  H  H  S  F  F  L  S  R  S  I  K  S  K  *  K  S  N  Y  C  S  L  N  Y  I  V  *  G  N  S  K  Q  I  L  H  G  S  *  R  A  W  I  *  I  G  R  S  N  I  R  E  L  R  A  *  E  G  L  Y  K  K  C  V  R  *  T  R  T  T  Y  G  Y  Q  F  L  S  S  V  S  T  T  *  I  N  L  W  V  T  S  P  Y  R  S  K  C  N  Y  N  S  S  S  R  F  A  S  G  W  P  S  S  S  *  G  W  K  M  V  I  Y  *  T  S  A  *  C  L  C  H  Q  S  W  *  S  I  G  G  K  H  V  F  L  C  F  C  F  N  L  C  D  I  R  L  A  H  R  L  K  I  Q  L  I  R  *  K  S  I  N  F  *  M  K  *  L  F  I  V  C  A  G  V  E  *  W  E  V  *  K  Y  M  A  *  S  Y  C  K  F  R  Q  S  K  D  V  C  G  F  F  S  L  S  Q  *  L  F  H  Y  Q  C  S  K  N  L  N  *  R  W  I  F </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0117B06.1" strand="-"/>
                <serials PGL_serial="18" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="135150" stop="134749"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>399</number_coding_nucleotides>
                  <number_encoded_amino_acids>133</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IILFREIVSKYCMEVRELGYRLEEAISESLGLEKDCIKNVLGEQGQHMAINFYPQCPQPELTYGLPAHTDPNAITILLQDLQVAGLQVLKDGKWLSIKPQPNAFVINLGDQLEVNTSFSVSVSIYVISDLHIV*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="19" PGL_strand="-" PGL_start="140469" PGL_stop="139292"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="140469" e_stop="139760"/>
            <exon e_start="139322" e_stop="139292"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.978" e_score="0.906"/>
          <exon-only e_score="0.548"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.906">
            <gDNA_exon_boundary e_start="140469" e_stop="139760" e_length="710"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.978">
            <gDNA_intron_boundary i_start="139759" i_stop="139323" i_length="437"/>
          </intron>
          <exon e_serial="2" e_score="0.548">
            <gDNA_exon_boundary e_start="139322" e_stop="139292" e_length="31"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="140469" stop="139760"/>
              <exon start="139322" stop="139292"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U332756" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="19" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CTCACCCCAACCCCCATACCCATACACCAGTGGTTATCTTCTTCCCCCATCATTCTAATGATTTCAAAATTCTTAGTATCAGTGGTTATCTTCTTCCCCCACCATTCTAATGGTTTCAAAATTCTTAGTGTTTTGTTTCATTTATAATTTTTCGAATAGATTCTTTTCCCCATTTTTCTCTACCTAAAAAACGAGATGAAGTAAAAAGTTATAATTAATAAAAAAGCTGATGAAAAAAAATTGTCGGATTAAAGATGGAACTGTACAGGGAAGGGGGGGGCGCCATTAATGGAGTTAGAGGAAATGTAAGTTTTGTTCCAGTTGAAGGCAGGAAAGTGGGTGTTTAGGTTTTACTTTTTTTTTTCATTTGTTTTACTTTAAAATAATTTTTATTTTTTTTTACTTTATAATATAATGTTTAAATAATTTTTTGGATTAAAAAATAACACATGTCATTATTTGATTGGTCAAATTGACATGTCAGCGCGAGTGTATTTCACACATTCTCTATTTTTTGTTTATTCTCGAAAAAATGTTCAAATGGTTCAAATTCAAAATGGTTGAAGTGTTCAATAGATAGTACGTCTAGTTAAGGTGTCTAAATGAATAATTGGGACAAATTTAAGTGACCGCATATGATTTTGGCCTACTATTTTTATACGCACTACGTATAATATAATTTTATGACGAATAATATAATATTCAACTAG : TACTAGAGAATAGAAAGAAACATAGTCATAA</gDNA_template>
            <first_frame> L  T  P  T  P  I  P  I  H  Q  W  L  S  S  S  P  I  I  L  M  I  S  K  F  L  V  S  V  V  I  F  F  P  H  H  S  N  G  F  K  I  L  S  V  L  F  H  L  *  F  F  E  *  I  L  F  P  I  F  L  Y  L  K  N  E  M  K  *  K  V  I  I  N  K  K  A  D  E  K  K  L  S  D  *  R  W  N  C  T  G  K  G  G  A  P  L  M  E  L  E  E  M  *  V  L  F  Q  L  K  A  G  K  W  V  F  R  F  Y  F  F  F  S  F  V  L  L  *  N  N  F  Y  F  F  L  L  Y  N  I  M  F  K  *  F  F  G  L  K  N  N  T  C  H  Y  L  I  G  Q  I  D  M  S  A  R  V  Y  F  T  H  S  L  F  F  V  Y  S  R  K  N  V  Q  M  V  Q  I  Q  N  G  *  S  V  Q  *  I  V  R  L  V  K  V  S  K  *  I  I  G  T  N  L  S  D  R  I  *  F  W  P  T  I  F  I  R  T  T  Y  N  I  I  L  *  R  I  I  *  Y  S  T  S :   T  R  E  *  K  E  T  *  S  * </first_frame>
            <second_frame>  S  P  Q  P  P  Y  P  Y  T  S  G  Y  L  L  P  P  S  F  *  *  F  Q  N  S  *  Y  Q  W  L  S  S  S  P  T  I  L  M  V  S  K  F  L  V  F  C  F  I  Y  N  F  S  N  R  F  F  S  P  F  F  S  T  *  K  T  R  *  S  K  K  L  *  L  I  K  K  L  M  K  K  N  C  R  I  K  D  G  T  V  Q  G  R  G  G  R  H  *  W  S  *  R  K  C  K  F  C  S  S  *  R  Q  E  S  G  C  L  G  F  T  F  F  F  H  L  F  Y  F  K  I  I  F  I  F  F  Y  F  I  I  *  C  L  N  N  F  L  D  *  K  I  T  H  V  I  I  *  L  V  K  L  T  C  Q  R  E  C  I  S  H  I  L  Y  F  L  F  I  L  E  K  M  F  K  W  F  K  F  K  M  V  E  V  F  N  R  *  Y  V  *  L  R  C  L  N  E  *  L  G  Q  I  *  V  T  A  Y  D  F  G  L  L  F  L  Y  A  L  R  I  I  *  F  Y  D  E  *  Y  N  I  Q  L   : V  L  E  N  R  K  K  H  S  H   </second_frame>
            <third_frame>   H  P  N  P  H  T  H  T  P  V  V  I  F  F  P  H  H  S  N  D  F  K  I  L  S  I  S  G  Y  L  L  P  P  P  F  *  W  F  Q  N  S  *  C  F  V  S  F  I  I  F  R  I  D  S  F  P  H  F  S  L  P  K  K  R  D  E  V  K  S  Y  N  *  *  K  S  *  *  K  K  I  V  G  L  K  M  E  L  Y  R  E  G  G  G  A  I  N  G  V  R  G  N  V  S  F  V  P  V  E  G  R  K  V  G  V  *  V  L  L  F  F  F  I  C  F  T  L  K  *  F  L  F  F  F  T  L  *  Y  N  V  *  I  I  F  W  I  K  K  *  H  M  S  L  F  D  W  S  N  *  H  V  S  A  S  V  F  H  T  F  S  I  F  C  L  F  S  K  K  C  S  N  G  S  N  S  K  W  L  K  C  S  I  D  S  T  S  S  *  G  V  *  M  N  N  W  D  K  F  K  *  P  H  M  I  L  A  Y  Y  F  Y  T  H  Y  V  *  Y  N  F  M  T  N  N  I  I  F  N  *  :  Y  *  R  I  E  R  N  I  V  I  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C06HBa0117B06.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="20" PGL_strand="+" PGL_start="144247" PGL_stop="145070"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="144247" e_stop="145070"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="144247" e_stop="145070" e_length="824"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="144247" stop="145070"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U335847" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="20" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CTTCTTCTTGTCCCGCTACTGCTTCTCCAGCTTTGTCACTGACATTGTCATCTACCAATTCACGATTTTTAAATTCAGCTTTCAAGATGAATGAAATTAATGTTCCTGTCAGGAATAGGGTGACAAAATCCTTTGGGGTCCGGATGTCTTGGGATGGTCCACTTTCTTCTGTTAAACTCATTCTTCAAGGGAAAAATCTTGAGGTCACACTCCTTAGGCCTTACAATATTATTATTTCCCTGCATTTTTTGCTTATATCTGCTAAAGTGTACTTCATAGGAACTTGGGTTTTCTGAAAAATAGTTAATTGATTTTGAATATACTCCTCTATCAAATGACTGCTCAGGTGCTATAAGGTCTATCAGAAACAACCTGTGTGTCCTGAAAAAGTAGGACTAAGATCTGCGTACTTAATAGTACCTTTTAGCATCTTATGTCTCTGTATCAAAATCTAATTTTGATGGGATCTACCATTTCAGTGAAAAATAGGGCACAATGAAAGAAAAATCTGTTAATGTGATAGCAATTAGTTGGATTTATAGTTTAGTCATGTTCTGTGTTTCTATTGGTTCTCTAATTTGTCAGAGAAGAAAATATAGAGAGCTTCTAGTATCTTTATTACTCATTGAGTCATTTCTAATTTTGTTTTGCTTAATGTTAGTTTGAGATGATCTTAAATGAAGGGACATGGTCAATGAGGATTCATATAGCTGAGCAAACTTATTGCGATTGTGTTGTAGCTGTTGTAGAAAAAATACGTATGAATTGACATCAAAAAAATTAGCTTGTTGGACTTTAACCATTTCAATAGCTAGTTCACAATG</gDNA_template>
            <first_frame> L  L  L  V  P  L  L  L  L  Q  L  C  H  *  H  C  H  L  P  I  H  D  F  *  I  Q  L  S  R  *  M  K  L  M  F  L  S  G  I  G  *  Q  N  P  L  G  S  G  C  L  G  M  V  H  F  L  L  L  N  S  F  F  K  G  K  I  L  R  S  H  S  L  G  L  T  I  L  L  F  P  C  I  F  C  L  Y  L  L  K  C  T  S  *  E  L  G  F  S  E  K  *  L  I  D  F  E  Y  T  P  L  S  N  D  C  S  G  A  I  R  S  I  R  N  N  L  C  V  L  K  K  *  D  *  D  L  R  T  *  *  Y  L  L  A  S  Y  V  S  V  S  K  S  N  F  D  G  I  Y  H  F  S  E  K  *  G  T  M  K  E  K  S  V  N  V  I  A  I  S  W  I  Y  S  L  V  M  F  C  V  S  I  G  S  L  I  C  Q  R  R  K  Y  R  E  L  L  V  S  L  L  L  I  E  S  F  L  I  L  F  C  L  M  L  V  *  D  D  L  K  *  R  D  M  V  N  E  D  S  Y  S  *  A  N  L  L  R  L  C  C  S  C  C  R  K  N  T  Y  E  L  T  S  K  K  L  A  C  W  T  L  T  I  S  I  A  S  S  Q   </first_frame>
            <second_frame>  F  F  L  S  R  Y  C  F  S  S  F  V  T  D  I  V  I  Y  Q  F  T  I  F  K  F  S  F  Q  D  E  *  N  *  C  S  C  Q  E  *  G  D  K  I  L  W  G  P  D  V  L  G  W  S  T  F  F  C  *  T  H  S  S  R  E  K  S  *  G  H  T  P  *  A  L  Q  Y  Y  Y  F  P  A  F  F  A  Y  I  C  *  S  V  L  H  R  N  L  G  F  L  K  N  S  *  L  I  L  N  I  L  L  Y  Q  M  T  A  Q  V  L  *  G  L  S  E  T  T  C  V  S  *  K  S  R  T  K  I  C  V  L  N  S  T  F  *  H  L  M  S  L  Y  Q  N  L  I  L  M  G  S  T  I  S  V  K  N  R  A  Q  *  K  K  N  L  L  M  *  *  Q  L  V  G  F  I  V  *  S  C  S  V  F  L  L  V  L  *  F  V  R  E  E  N  I  E  S  F  *  Y  L  Y  Y  S  L  S  H  F  *  F  C  F  A  *  C  *  F  E  M  I  L  N  E  G  T  W  S  M  R  I  H  I  A  E  Q  T  Y  C  D  C  V  V  A  V  V  E  K  I  R  M  N  *  H  Q  K  N  *  L  V  G  L  *  P  F  Q  *  L  V  H  N  </second_frame>
            <third_frame>   S  S  C  P  A  T  A  S  P  A  L  S  L  T  L  S  S  T  N  S  R  F  L  N  S  A  F  K  M  N  E  I  N  V  P  V  R  N  R  V  T  K  S  F  G  V  R  M  S  W  D  G  P  L  S  S  V  K  L  I  L  Q  G  K  N  L  E  V  T  L  L  R  P  Y  N  I  I  I  S  L  H  F  L  L  I  S  A  K  V  Y  F  I  G  T  W  V  F  *  K  I  V  N  *  F  *  I  Y  S  S  I  K  *  L  L  R  C  Y  K  V  Y  Q  K  Q  P  V  C  P  E  K  V  G  L  R  S  A  Y  L  I  V  P  F  S  I  L  C  L  C  I  K  I  *  F  *  W  D  L  P  F  Q  *  K  I  G  H  N  E  R  K  I  C  *  C  D  S  N  *  L  D  L  *  F  S  H  V  L  C  F  Y  W  F  S  N  L  S  E  K  K  I  *  R  A  S  S  I  F  I  T  H  *  V  I  S  N  F  V  L  L  N  V  S  L  R  *  S  *  M  K  G  H  G  Q  *  G  F  I  *  L  S  K  L  I  A  I  V  L  *  L  L  *  K  K  Y  V  *  I  D  I  K  K  I  S  L  L  D  F  N  H  F  N  S  *  F  T  M </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0117B06.1" strand="+"/>
                <serials PGL_serial="20" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="144249" stop="144542"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>291</number_coding_nucleotides>
                  <number_encoded_amino_acids>97</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SSCPATASPALSLTLSSTNSRFLNSAFKMNEINVPVRNRVTKSFGVRMSWDGPLSSVKLILQGKNLEVTLLRPYNIIISLHFLLISAKVYFIGTWVF*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="21" PGL_strand="+" PGL_start="148912" PGL_stop="152386"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="148912" e_stop="149675"/>
            <exon e_start="149768" e_stop="149877"/>
            <exon e_start="149986" e_stop="150045"/>
            <exon e_start="150757" e_stop="150999"/>
            <exon e_start="151090" e_stop="151275"/>
            <exon e_start="151406" e_stop="151654"/>
            <exon e_start="151768" e_stop="152386"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.991" e_score="1.000"/>
          <exon-intron don_prob="0.989" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.987" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.990" e_score="1.000"/>
          <exon-intron don_prob="0.952" acc_prob="0.846" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.998" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="148912" e_stop="149675" e_length="764"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.991">
            <gDNA_intron_boundary i_start="149676" i_stop="149767" i_length="92"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="149768" e_stop="149877" e_length="110"/>
          </exon>
          <intron i_serial="2" don_prob="0.989" acc_prob="0.999">
            <gDNA_intron_boundary i_start="149878" i_stop="149985" i_length="108"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="149986" e_stop="150045" e_length="60"/>
          </exon>
          <intron i_serial="3" don_prob="1.000" acc_prob="0.987">
            <gDNA_intron_boundary i_start="150046" i_stop="150756" i_length="711"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="150757" e_stop="150999" e_length="243"/>
          </exon>
          <intron i_serial="4" don_prob="0.991" acc_prob="0.990">
            <gDNA_intron_boundary i_start="151000" i_stop="151089" i_length="90"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="151090" e_stop="151275" e_length="186"/>
          </exon>
          <intron i_serial="5" don_prob="0.952" acc_prob="0.846">
            <gDNA_intron_boundary i_start="151276" i_stop="151405" i_length="130"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="151406" e_stop="151654" e_length="249"/>
          </exon>
          <intron i_serial="6" don_prob="1.000" acc_prob="0.998">
            <gDNA_intron_boundary i_start="151655" i_stop="151767" i_length="113"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="151768" e_stop="152386" e_length="619"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="148912" stop="149675"/>
              <exon start="149768" stop="149877"/>
              <exon start="149986" stop="150045"/>
              <exon start="150757" stop="150999"/>
              <exon start="151090" stop="151275"/>
              <exon start="151406" stop="151654"/>
              <exon start="151768" stop="152386"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U312646" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="21" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTGTAGCCCCGTTTTACATCTTCCAGAGACTCCATTTGTATCGGTTCACATACAGTAGCAAAGCGCCATTATCTTACTCTACCCCATTGGCAAACCCACAGCCACAATTTTCCAATCCTCCATTATCCCTTCTACAATTTTCTATATAAATACCCACATCTCTCTGCTCTACTCCCTTATTATCAACAACAACCACCAAATTTCTTCTTTTTTTTCTTCGATAGTAGCAATCTATCAACAAAAACAGAGACCCCATCACAAGAATCTTGGAATTTTAGTGTTGGGTTTAAGAGGAAAAGGGGTTATTGTATTTTGCAGTTTTGAGGGTAAAGCCCAGTTTAACAAGTTGTAGACATCACGGCTATACACAAAGTAAACCGCCGACCACTTTTACATGTTCCAGCAGTACGTCGTAAGGGTTGTGTAACAGCTACTAACCCTGCGCCGCACGGTGGACGTGGCGCTTTGCCTTCTGAAGGTGGTAGTCCTTCCGACCTCCTCTTCCTTGCCGGCGGCGGTTCTTTCCTCTCCTTCTCCTACTAGATATAGTTATACTTACTATAGATCTCTAGCTTATTACGTACAGTTGTATCTAGTATTCTATTGATTATTCGAAGAAAACACACAAAAAGAAGTAAAGATGATGCTCAAAATTAAGAGGGTTCCTACGCTTGTTTCTAACTTTCAAAAGGATGAGGCTGATGAAATTGCTGCTCGTGGTGCTGGTTGTGGCCGGAATTGCCTCAGGAATTGCTGCCTTCCAG : GTTCAAAGCTGCCACTGTATGGTTTCAAAAATTTGAGCTACGGCAAGTCTGTCGCCGATGAAACAAAGGAATCTCCGATCGACTTTCTGGAATCCCTTGTTCTTGGGGAA : TGGGAGGATCGTCAGCAGAAAGGCCTCTTTCGCTATGATGTCACTGCTTGCGAAACCAAG : GTGATTCCTGGAGAATATGGTTTCGTTGCTCAACTGAATGAGGGAAGGCACCTCAAGAAGCGGCCAACTGAGTTTCGAGTTGATAAGGTTCTGCAGCCTTTTGATGGAAGCAAGTTCAACTTCACTAAGGTTGGACAGGAAGAGTTGCTCTTTCAGTTTGAAGCAAGTGAGGAAGATGAAGTCCAGCTCTATCCAGATGCGCCAATTGATCCTGAGAAATCTCCAAGTGTCGTTGCCATAAAT : GTCAGTCCCATTGAGTACGGACACGTGCTTTTGATCCCTAAGGTCCTTGAATGCCTTCCCCAGAGGATTGACAGGGACAGCTTCCTGCTTGCACTGCACATGGCTGCCGAAGCAGCAAACCCTTACTTCCGATTGGGTTACAACAGCTTGGGTGCATTTGCCACCATCAACCATCTTCACTTCCAG : GCTTATTTCTTGGCTGTGCAATTTCCCATTGAGAAGGCCCCAACTCAGAAGATAACTGTCACTGATGCTGGAGTGAAGATATCGGAGATGCTGCATTACCCAGTTCGAGGTCTTGTCTTTGAGGGTGGAAATACTTTGGAGGATTTGGCCGATGTTGTCTCAGATTCTTGCATTTGTCTGCAAGAGAACAACATCCCTTACAATGTCCTAATCTCTGATTCAGGGAAAAGGATATTCCTTCTCCCACAG : TGCTATGCGGAGAAACAAGCGCTTGGAGAGGTCAGCGCTGAACTCCTCGACACCCAAGTCAATCCTGCTGTTTGGGAGATTAGTGGACACATGGTCTTGAAGAGGAAGGAGGATTATGAGGGTGCAACTGAGGCAAATGCATGGAGGCTTCTCGCAGAGGTCTCACTCTCTGAAGCAAGGTTCCAAGAAGTGACTGCTCTCATCTTTGAAGCCATTAGTCTCAGTGTTGAAGAGAACGAGGACGGCACTGATGGTTCTCCTGAGGATCTAGATGTCACACCTCCACAGCCCATGGAGGAGATTGATGGTCTCAACACCCACAGTACCATGGTTCCCGCCTAGGGTTTTCACGGCCCAGCTCTGGTGTTCATCGCATGTTATTATTTCATGAGTTTCCATCTCTAGCTGCCCTTGTGAAATATCACTTAAATAAGGCAAAACCATGTTCAATGTATTTGATGAAATCTGGTCTGTTCCTCTGTGAATTGAACCTTGTGTATTATTGCTTTTTTCTGGTATAAGCCATGTTCTATGTATATGTAATGTGGAGTTGGTGTGTGAAATGACCCATGTATGCTGTTTCTAATTAAGACAATACTAATATAAGTTTGATTTCCCT</gDNA_template>
            <first_frame> L  *  P  R  F  T  S  S  R  D  S  I  C  I  G  S  H  T  V  A  K  R  H  Y  L  T  L  P  H  W  Q  T  H  S  H  N  F  P  I  L  H  Y  P  F  Y  N  F  L  Y  K  Y  P  H  L  S  A  L  L  P  Y  Y  Q  Q  Q  P  P  N  F  F  F  F  F  F  D  S  S  N  L  S  T  K  T  E  T  P  S  Q  E  S  W  N  F  S  V  G  F  K  R  K  R  G  Y  C  I  L  Q  F  *  G  *  S  P  V  *  Q  V  V  D  I  T  A  I  H  K  V  N  R  R  P  L  L  H  V  P  A  V  R  R  K  G  C  V  T  A  T  N  P  A  P  H  G  G  R  G  A  L  P  S  E  G  G  S  P  S  D  L  L  F  L  A  G  G  G  S  F  L  S  F  S  Y  *  I  *  L  Y  L  L  *  I  S  S  L  L  R  T  V  V  S  S  I  L  L  I  I  R  R  K  H  T  K  R  S  K  D  D  A  Q  N  *  E  G  S  Y  A  C  F  *  L  S  K  G  *  G  *  *  N  C  C  S  W  C  W  L  W  P  E  L  P  Q  E  L  L  P  S  R :   F  K  A  A  T  V  W  F  Q  K  F  E  L  R  Q  V  C  R  R  *  N  K  G  I  S  D  R  L  S  G  I  P  C  S  W  G   : M  G  G  S  S  A  E  R  P  L  S  L  *  C  H  C  L  R  N  Q   : G  D  S  W  R  I  W  F  R  C  S  T  E  *  G  K  A  P  Q  E  A  A  N  *  V  S  S  *  *  G  S  A  A  F  *  W  K  Q  V  Q  L  H  *  G  W  T  G  R  V  A  L  S  V  *  S  K  *  G  R  *  S  P  A  L  S  R  C  A  N  *  S  *  E  I  S  K  C  R  C  H  K   : C  Q  S  H  *  V  R  T  R  A  F  D  P  *  G  P  *  M  P  S  P  E  D  *  Q  G  Q  L  P  A  C  T  A  H  G  C  R  S  S  K  P  L  L  P  I  G  L  Q  Q  L  G  C  I  C  H  H  Q  P  S  S  L  P   : G  L  F  L  G  C  A  I  S  H  *  E  G  P  N  S  E  D  N  C  H  *  C  W  S  E  D  I  G  D  A  A  L  P  S  S  R  S  C  L  *  G  W  K  Y  F  G  G  F  G  R  C  C  L  R  F  L  H  L  S  A  R  E  Q  H  P  L  Q  C  P  N  L  *  F  R  E  K  D  I  P  S  P  T   : V  L  C  G  E  T  S  A  W  R  G  Q  R  *  T  P  R  H  P  S  Q  S  C  C  L  G  D  *  W  T  H  G  L  E  E  E  G  G  L  *  G  C  N  *  G  K  C  M  E  A  S  R  R  G  L  T  L  *  S  K  V  P  R  S  D  C  S  H  L  *  S  H  *  S  Q  C  *  R  E  R  G  R  H  *  W  F  S  *  G  S  R  C  H  T  S  T  A  H  G  G  D  *  W  S  Q  H  P  Q  Y  H  G  S  R  L  G  F  S  R  P  S  S  G  V  H  R  M  L  L  F  H  E  F  P  S  L  A  A  L  V  K  Y  H  L  N  K  A  K  P  C  S  M  Y  L  M  K  S  G  L  F  L  C  E  L  N  L  V  Y  Y  C  F  F  L  V  *  A  M  F  Y  V  Y  V  M  W  S  W  C  V  K  *  P  M  Y  A  V  S  N  *  D  N  T  N  I  S  L  I  S   </first_frame>
            <second_frame>  C  S  P  V  L  H  L  P  E  T  P  F  V  S  V  H  I  Q  *  Q  S  A  I  I  L  L  Y  P  I  G  K  P  T  A  T  I  F  Q  S  S  I  I  P  S  T  I  F  Y  I  N  T  H  I  S  L  L  Y  S  L  I  I  N  N  N  H  Q  I  S  S  F  F  S  S  I  V  A  I  Y  Q  Q  K  Q  R  P  H  H  K  N  L  G  I  L  V  L  G  L  R  G  K  G  V  I  V  F  C  S  F  E  G  K  A  Q  F  N  K  L  *  T  S  R  L  Y  T  K  *  T  A  D  H  F  Y  M  F  Q  Q  Y  V  V  R  V  V  *  Q  L  L  T  L  R  R  T  V  D  V  A  L  C  L  L  K  V  V  V  L  P  T  S  S  S  L  P  A  A  V  L  S  S  P  S  P  T  R  Y  S  Y  T  Y  Y  R  S  L  A  Y  Y  V  Q  L  Y  L  V  F  Y  *  L  F  E  E  N  T  Q  K  E  V  K  M  M  L  K  I  K  R  V  P  T  L  V  S  N  F  Q  K  D  E  A  D  E  I  A  A  R  G  A  G  C  G  R  N  C  L  R  N  C  C  L  P   : G  S  K  L  P  L  Y  G  F  K  N  L  S  Y  G  K  S  V  A  D  E  T  K  E  S  P  I  D  F  L  E  S  L  V  L  G  E  :  W  E  D  R  Q  Q  K  G  L  F  R  Y  D  V  T  A  C  E  T  K  :  V  I  P  G  E  Y  G  F  V  A  Q  L  N  E  G  R  H  L  K  K  R  P  T  E  F  R  V  D  K  V  L  Q  P  F  D  G  S  K  F  N  F  T  K  V  G  Q  E  E  L  L  F  Q  F  E  A  S  E  E  D  E  V  Q  L  Y  P  D  A  P  I  D  P  E  K  S  P  S  V  V  A  I  N  :  V  S  P  I  E  Y  G  H  V  L  L  I  P  K  V  L  E  C  L  P  Q  R  I  D  R  D  S  F  L  L  A  L  H  M  A  A  E  A  A  N  P  Y  F  R  L  G  Y  N  S  L  G  A  F  A  T  I  N  H  L  H  F  Q  :  A  Y  F  L  A  V  Q  F  P  I  E  K  A  P  T  Q  K  I  T  V  T  D  A  G  V  K  I  S  E  M  L  H  Y  P  V  R  G  L  V  F  E  G  G  N  T  L  E  D  L  A  D  V  V  S  D  S  C  I  C  L  Q  E  N  N  I  P  Y  N  V  L  I  S  D  S  G  K  R  I  F  L  L  P  Q  :  C  Y  A  E  K  Q  A  L  G  E  V  S  A  E  L  L  D  T  Q  V  N  P  A  V  W  E  I  S  G  H  M  V  L  K  R  K  E  D  Y  E  G  A  T  E  A  N  A  W  R  L  L  A  E  V  S  L  S  E  A  R  F  Q  E  V  T  A  L  I  F  E  A  I  S  L  S  V  E  E  N  E  D  G  T  D  G  S  P  E  D  L  D  V  T  P  P  Q  P  M  E  E  I  D  G  L  N  T  H  S  T  M  V  P  A  *  G  F  H  G  P  A  L  V  F  I  A  C  Y  Y  F  M  S  F  H  L  *  L  P  L  *  N  I  T  *  I  R  Q  N  H  V  Q  C  I  *  *  N  L  V  C  S  S  V  N  *  T  L  C  I  I  A  F  F  W  Y  K  P  C  S  M  Y  M  *  C  G  V  G  V  *  N  D  P  C  M  L  F  L  I  K  T  I  L  I  *  V  *  F  P  </second_frame>
            <third_frame>   V  A  P  F  Y  I  F  Q  R  L  H  L  Y  R  F  T  Y  S  S  K  A  P  L  S  Y  S  T  P  L  A  N  P  Q  P  Q  F  S  N  P  P  L  S  L  L  Q  F  S  I  *  I  P  T  S  L  C  S  T  P  L  L  S  T  T  T  T  K  F  L  L  F  F  L  R  *  *  Q  S  I  N  K  N  R  D  P  I  T  R  I  L  E  F  *  C  W  V  *  E  E  K  G  L  L  Y  F  A  V  L  R  V  K  P  S  L  T  S  C  R  H  H  G  Y  T  Q  S  K  P  P  T  T  F  T  C  S  S  S  T  S  *  G  L  C  N  S  Y  *  P  C  A  A  R  W  T  W  R  F  A  F  *  R  W  *  S  F  R  P  P  L  P  C  R  R  R  F  F  P  L  L  L  L  L  D  I  V  I  L  T  I  D  L  *  L  I  T  Y  S  C  I  *  Y  S  I  D  Y  S  K  K  T  H  K  K  K  *  R  *  C  S  K  L  R  G  F  L  R  L  F  L  T  F  K  R  M  R  L  M  K  L  L  L  V  V  L  V  V  A  G  I  A  S  G  I  A  A  F  Q  :  V  Q  S  C  H  C  M  V  S  K  I  *  A  T  A  S  L  S  P  M  K  Q  R  N  L  R  S  T  F  W  N  P  L  F  L  G  N :   G  R  I  V  S  R  K  A  S  F  A  M  M  S  L  L  A  K  P  R :   *  F  L  E  N  M  V  S  L  L  N  *  M  R  E  G  T  S  R  S  G  Q  L  S  F  E  L  I  R  F  C  S  L  L  M  E  A  S  S  T  S  L  R  L  D  R  K  S  C  S  F  S  L  K  Q  V  R  K  M  K  S  S  S  I  Q  M  R  Q  L  I  L  R  N  L  Q  V  S  L  P  *  M :   S  V  P  L  S  T  D  T  C  F  *  S  L  R  S  L  N  A  F  P  R  G  L  T  G  T  A  S  C  L  H  C  T  W  L  P  K  Q  Q  T  L  T  S  D  W  V  T  T  A  W  V  H  L  P  P  S  T  I  F  T  S  R :   L  I  S  W  L  C  N  F  P  L  R  R  P  Q  L  R  R  *  L  S  L  M  L  E  *  R  Y  R  R  C  C  I  T  Q  F  E  V  L  S  L  R  V  E  I  L  W  R  I  W  P  M  L  S  Q  I  L  A  F  V  C  K  R  T  T  S  L  T  M  S  *  S  L  I  Q  G  K  G  Y  S  F  S  H  S :   A  M  R  R  N  K  R  L  E  R  S  A  L  N  S  S  T  P  K  S  I  L  L  F  G  R  L  V  D  T  W  S  *  R  G  R  R  I  M  R  V  Q  L  R  Q  M  H  G  G  F  S  Q  R  S  H  S  L  K  Q  G  S  K  K  *  L  L  S  S  L  K  P  L  V  S  V  L  K  R  T  R  T  A  L  M  V  L  L  R  I  *  M  S  H  L  H  S  P  W  R  R  L  M  V  S  T  P  T  V  P  W  F  P  P  R  V  F  T  A  Q  L  W  C  S  S  H  V  I  I  S  *  V  S  I  S  S  C  P  C  E  I  S  L  K  *  G  K  T  M  F  N  V  F  D  E  I  W  S  V  P  L  *  I  E  P  C  V  L  L  L  F  S  G  I  S  H  V  L  C  I  C  N  V  E  L  V  C  E  M  T  H  V  C  C  F  *  L  R  Q  Y  *  Y  K  F  D  F  P </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0117B06.1" strand="+"/>
                <serials PGL_serial="21" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="149519" stop="149675"/>
                    <exon start="149768" stop="149877"/>
                    <exon start="149986" stop="150045"/>
                    <exon start="150757" stop="150999"/>
                    <exon start="151090" stop="151275"/>
                    <exon start="151406" stop="151654"/>
                    <exon start="151768" stop="152109"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1344</number_coding_nucleotides>
                  <number_encoded_amino_acids>448</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LFEENTQKEVKMMLKIKRVPTLVSNFQKDEADEIAARGAGCGRNCLRNCCLPGSKLPLYGFKNLSYGKSVADETKESPIDFLESLVLGEWEDRQQKGLFRYDVTACETKVIPGEYGFVAQLNEGRHLKKRPTEFRVDKVLQPFDGSKFNFTKVGQEELLFQFEASEEDEVQLYPDAPIDPEKSPSVVAINVSPIEYGHVLLIPKVLECLPQRIDRDSFLLALHMAAEAANPYFRLGYNSLGAFATINHLHFQAYFLAVQFPIEKAPTQKITVTDAGVKISEMLHYPVRGLVFEGGNTLEDLADVVSDSCICLQENNIPYNVLISDSGKRIFLLPQCYAEKQALGEVSAELLDTQVNPAVWEISGHMVLKRKEDYEGATEANAWRLLAEVSLSEARFQEVTALIFEAISLSVEENEDGTDGSPEDLDVTPPQPMEEIDGLNTHSTMVPA*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0117B06.1" strand="+"/>
                <serials PGL_serial="21" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="148918" stop="149235"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>315</number_coding_nucleotides>
                  <number_encoded_amino_acids>105</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PRFTSSRDSICIGSHTVAKRHYLTLPHWQTHSHNFPILHYPFYNFLYKYPHLSALLPYYQQQPPNFFFFFFDSSNLSTKTETPSQESWNFSVGFKRKRGYCILQF*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0117B06.1" strand="+"/>
                <serials PGL_serial="21" AGS_serial="1" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="149254" stop="149454"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>198</number_coding_nucleotides>
                  <number_encoded_amino_acids>66</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QVVDITAIHKVNRRPLLHVPAVRRKGCVTATNPAPHGGRGALPSEGGSPSDLLFLAGGGSFLSFSY*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="150977" e_stop="151755"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="150977" e_stop="151755" e_length="779"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="150977" stop="151755"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U312647" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="21" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CTCCAAGTGTCGTTGCCATAAATGTATGTTCTTAGTTAGTTTTGCACATATACTGGAACCTTTTGGTAAGTAGAGACAGTGATTAATGAGTTTATTGGTTTTCAATGCAACAGGTCAGTCCCATTGAGTACGGACACGTGCTTTTGATCCCTAAGGTCCTTGAATGCCTTCCCCAGAGGATTGACAGGGACAGCTTCCTGCTTGCACTGCACATGGCTGCCGAAGCAGCAAACCCTTACTTCCGATTGGGTTACAACAGCTTGGGTGCATTTGCCACCATCAACCATCTTCACTTCCAGGTAGAGTCCACGACACTTCCCATAATTGACATGGTTTTGGAATTGTCAGTTCTAGTTGTTTGCTCTAGTGCTGACTGCTGAGACCTTAATAAAGAAGAAGGAACTCACTTTCATTGTTTTTGCTCTTCAGGCTTATTTCTTGGCTGTGCAATTTCCCATTGAGAAGGCCCCAACTCAGAAGATAACTGTCACTGATGCTGGAGTGAAGATATCGGAGATGCTGCATTACCCAGTTCGAGGTCTTGTCTTTGAGGGTGGAAATACTTTGGAGGATTTGGCCGATGTTGTCTCAGATTCTTGCATTTGTCTGCAAGAGAACAACATCCCTTACAATGTCCTAATCTCTGATTCAGGGAAAAGGATATTCCTTCTCCCACAGGTATAACTCTTTGAACCACATTTTTACAACTACTTTGGGATTGCTTAATTATTAGCAGTTCCCAACAATTGATCACTTTCCTAACTTACATGTGTTTTGGT</gDNA_template>
            <first_frame> L  Q  V  S  L  P  *  M  Y  V  L  S  *  F  C  T  Y  T  G  T  F  W  *  V  E  T  V  I  N  E  F  I  G  F  Q  C  N  R  S  V  P  L  S  T  D  T  C  F  *  S  L  R  S  L  N  A  F  P  R  G  L  T  G  T  A  S  C  L  H  C  T  W  L  P  K  Q  Q  T  L  T  S  D  W  V  T  T  A  W  V  H  L  P  P  S  T  I  F  T  S  R  *  S  P  R  H  F  P  *  L  T  W  F  W  N  C  Q  F  *  L  F  A  L  V  L  T  A  E  T  L  I  K  K  K  E  L  T  F  I  V  F  A  L  Q  A  Y  F  L  A  V  Q  F  P  I  E  K  A  P  T  Q  K  I  T  V  T  D  A  G  V  K  I  S  E  M  L  H  Y  P  V  R  G  L  V  F  E  G  G  N  T  L  E  D  L  A  D  V  V  S  D  S  C  I  C  L  Q  E  N  N  I  P  Y  N  V  L  I  S  D  S  G  K  R  I  F  L  L  P  Q  V  *  L  F  E  P  H  F  Y  N  Y  F  G  I  A  *  L  L  A  V  P  N  N  *  S  L  S  *  L  T  C  V  L   </first_frame>
            <second_frame>  S  K  C  R  C  H  K  C  M  F  L  V  S  F  A  H  I  L  E  P  F  G  K  *  R  Q  *  L  M  S  L  L  V  F  N  A  T  G  Q  S  H  *  V  R  T  R  A  F  D  P  *  G  P  *  M  P  S  P  E  D  *  Q  G  Q  L  P  A  C  T  A  H  G  C  R  S  S  K  P  L  L  P  I  G  L  Q  Q  L  G  C  I  C  H  H  Q  P  S  S  L  P  G  R  V  H  D  T  S  H  N  *  H  G  F  G  I  V  S  S  S  C  L  L  *  C  *  L  L  R  P  *  *  R  R  R  N  S  L  S  L  F  L  L  F  R  L  I  S  W  L  C  N  F  P  L  R  R  P  Q  L  R  R  *  L  S  L  M  L  E  *  R  Y  R  R  C  C  I  T  Q  F  E  V  L  S  L  R  V  E  I  L  W  R  I  W  P  M  L  S  Q  I  L  A  F  V  C  K  R  T  T  S  L  T  M  S  *  S  L  I  Q  G  K  G  Y  S  F  S  H  R  Y  N  S  L  N  H  I  F  T  T  T  L  G  L  L  N  Y  *  Q  F  P  T  I  D  H  F  P  N  L  H  V  F  W  </second_frame>
            <third_frame>   P  S  V  V  A  I  N  V  C  S  *  L  V  L  H  I  Y  W  N  L  L  V  S  R  D  S  D  *  *  V  Y  W  F  S  M  Q  Q  V  S  P  I  E  Y  G  H  V  L  L  I  P  K  V  L  E  C  L  P  Q  R  I  D  R  D  S  F  L  L  A  L  H  M  A  A  E  A  A  N  P  Y  F  R  L  G  Y  N  S  L  G  A  F  A  T  I  N  H  L  H  F  Q  V  E  S  T  T  L  P  I  I  D  M  V  L  E  L  S  V  L  V  V  C  S  S  A  D  C  *  D  L  N  K  E  E  G  T  H  F  H  C  F  C  S  S  G  L  F  L  G  C  A  I  S  H  *  E  G  P  N  S  E  D  N  C  H  *  C  W  S  E  D  I  G  D  A  A  L  P  S  S  R  S  C  L  *  G  W  K  Y  F  G  G  F  G  R  C  C  L  R  F  L  H  L  S  A  R  E  Q  H  P  L  Q  C  P  N  L  *  F  R  E  K  D  I  P  S  P  T  G  I  T  L  *  T  T  F  L  Q  L  L  W  D  C  L  I  I  S  S  S  Q  Q  L  I  T  F  L  T  Y  M  C  F  G </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0117B06.1" strand="+"/>
                <serials PGL_serial="21" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="151331" stop="151660"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>327</number_coding_nucleotides>
                  <number_encoded_amino_acids>109</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LFALVLTAETLIKKKELTFIVFALQAYFLAVQFPIEKAPTQKITVTDAGVKISEMLHYPVRGLVFEGGNTLEDLADVVSDSCICLQENNIPYNVLISDSGKRIFLLPQV*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0117B06.1" strand="+"/>
                <serials PGL_serial="21" AGS_serial="2" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="151066" stop="151356"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>288</number_coding_nucleotides>
                  <number_encoded_amino_acids>96</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VYWFSMQQVSPIEYGHVLLIPKVLECLPQRIDRDSFLLALHMAAEAANPYFRLGYNSLGAFATINHLHFQVESTTLPIIDMVLELSVLVVCSSADC*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="22" PGL_strand="-" PGL_start="158820" PGL_stop="158092"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="158820" e_stop="158092"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.997">
            <gDNA_exon_boundary e_start="158820" e_stop="158092" e_length="729"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="158820" stop="158092"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U324014" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="22" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTACAGCTATGGGGCTCTCAGCTTCTAAGAGAGTTAGCAATTCACTCCAAAATTCATCCGAATTCAACTCGGCATGTGATTCAGTCTATGATGATTGTCTCTCCCTATCACAGCACGCTTTCGCCGGAGTGAAACCCTACCAGCTTTTCTCCGCCGTGGAACGCCTGCACGCTTCTCTCTCTCCCTCCGTACCTCTCATAAAAAATTGGGTTAAATCGCCTCCGACCCGATTACAGGTCGATAAGGCCTTCAAAATCGTGTCAACGCGCCGATCCGGCGAAAAGGAGAGTGAAATTGTGCTTGGGAACGAGGAATTCAAGGAGTTCTCAGTGGAGGTATTTTCGGACGCTGTCGTTTCGTGTGCAGGGAAAGAGCTTCTAAAGCGGGTTCCGGTTGGTGCTTTGGGGATCGCTGGCGTTGGTGCGGTGGTGAAGCCTGGGAAAGAATTAATTGCGGCGGCGATTGGTGCTTACGCGCTCGGTGTTGCAACATCGGTATACGTCAGCTTGGCTTAAACGTATTTTTTTTGTTTTTTTTTAAAATTACAAAAATGAATAAAAGTTTTTACAAGTTTGGTTAAGCCCAAAAGTACAAATTAGTCATGTTTTAAATTATTATAACCCCTAATAAGAGACTGAAAGCAAGTAGAATAATTGTAATTAGATGATTAACAGTCTTTATCCACATTTATATAATTTGTATAAATTATTTTTTTTTTATAAAAAAAAA</gDNA_template>
            <first_frame> L  Q  L  W  G  S  Q  L  L  R  E  L  A  I  H  S  K  I  H  P  N  S  T  R  H  V  I  Q  S  M  M  I  V  S  P  Y  H  S  T  L  S  P  E  *  N  P  T  S  F  S  P  P  W  N  A  C  T  L  L  S  L  P  P  Y  L  S  *  K  I  G  L  N  R  L  R  P  D  Y  R  S  I  R  P  S  K  S  C  Q  R  A  D  P  A  K  R  R  V  K  L  C  L  G  T  R  N  S  R  S  S  Q  W  R  Y  F  R  T  L  S  F  R  V  Q  G  K  S  F  *  S  G  F  R  L  V  L  W  G  S  L  A  L  V  R  W  *  S  L  G  K  N  *  L  R  R  R  L  V  L  T  R  S  V  L  Q  H  R  Y  T  S  A  W  L  K  R  I  F  F  V  F  F  *  N  Y  K  N  E  *  K  F  L  Q  V  W  L  S  P  K  V  Q  I  S  H  V  L  N  Y  Y  N  P  *  *  E  T  E  S  K  *  N  N  C  N  *  M  I  N  S  L  Y  P  H  L  Y  N  L  Y  K  L  F  F  F  Y  K  K  K </first_frame>
            <second_frame>  Y  S  Y  G  A  L  S  F  *  E  S  *  Q  F  T  P  K  F  I  R  I  Q  L  G  M  *  F  S  L  *  *  L  S  L  P  I  T  A  R  F  R  R  S  E  T  L  P  A  F  L  R  R  G  T  P  A  R  F  S  L  S  L  R  T  S  H  K  K  L  G  *  I  A  S  D  P  I  T  G  R  *  G  L  Q  N  R  V  N  A  P  I  R  R  K  G  E  *  N  C  A  W  E  R  G  I  Q  G  V  L  S  G  G  I  F  G  R  C  R  F  V  C  R  E  R  A  S  K  A  G  S  G  W  C  F  G  D  R  W  R  W  C  G  G  E  A  W  E  R  I  N  C  G  G  D  W  C  L  R  A  R  C  C  N  I  G  I  R  Q  L  G  L  N  V  F  F  L  F  F  F  K  I  T  K  M  N  K  S  F  Y  K  F  G  *  A  Q  K  Y  K  L  V  M  F  *  I  I  I  T  P  N  K  R  L  K  A  S  R  I  I  V  I  R  *  L  T  V  F  I  H  I  Y  I  I  C  I  N  Y  F  F  F  I  K  K   </second_frame>
            <third_frame>   T  A  M  G  L  S  A  S  K  R  V  S  N  S  L  Q  N  S  S  E  F  N  S  A  C  D  S  V  Y  D  D  C  L  S  L  S  Q  H  A  F  A  G  V  K  P  Y  Q  L  F  S  A  V  E  R  L  H  A  S  L  S  P  S  V  P  L  I  K  N  W  V  K  S  P  P  T  R  L  Q  V  D  K  A  F  K  I  V  S  T  R  R  S  G  E  K  E  S  E  I  V  L  G  N  E  E  F  K  E  F  S  V  E  V  F  S  D  A  V  V  S  C  A  G  K  E  L  L  K  R  V  P  V  G  A  L  G  I  A  G  V  G  A  V  V  K  P  G  K  E  L  I  A  A  A  I  G  A  Y  A  L  G  V  A  T  S  V  Y  V  S  L  A  *  T  Y  F  F  C  F  F  L  K  L  Q  K  *  I  K  V  F  T  S  L  V  K  P  K  S  T  N  *  S  C  F  K  L  L  *  P  L  I  R  D  *  K  Q  V  E  *  L  *  L  D  D  *  Q  S  L  S  T  F  I  *  F  V  *  I  I  F  F  L  *  K  K  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0117B06.1" strand="-"/>
                <serials PGL_serial="22" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="158818" stop="158306"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>510</number_coding_nucleotides>
                  <number_encoded_amino_acids>170</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TAMGLSASKRVSNSLQNSSEFNSACDSVYDDCLSLSQHAFAGVKPYQLFSAVERLHASLSPSVPLIKNWVKSPPTRLQVDKAFKIVSTRRSGEKESEIVLGNEEFKEFSVEVFSDAVVSCAGKELLKRVPVGALGIAGVGAVVKPGKELIAAAIGAYALGVATSVYVSLA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="23" PGL_strand="-" PGL_start="161941" PGL_stop="160731"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="161941" e_stop="160731"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="161941" e_stop="160731" e_length="1211"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="161941" stop="160731"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U327524" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="23" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ATATTTTGTACTTCTGAGACTAATGCCCAAACATCCAAAATCACCAATCTAGATTCTAAGATATTCTACACAACCAGAACCCCTGATCAAGCTAAAGTCTATGCTAAACTCCCAAATCAAGCCAAAGTTTATCCCTCCAAAATTCCTAATCAAGCTAAGGTCTACACAACCAAAATCCCTAATCTAGATTCTAAGATATTCTACGCGACCAGAACCCCTGATCAAGCCAAGGTCTATCCAGCTAATCTTCCCGAACAAGCTAAGGTCTATACATCAAAAATTTATGCAACTTCACACTCTCATAGTCATCATCTTGGAGAAGTCTCTTTCTTCAGAGTCTCTACCCTCAAACCTGGAAACACAGTCCATCTAGACAACTTAGTGAACCCGTTCCCTCATCGCTCATTTCTTCCATCACAAATTGCCTCAAAGATCTCCATTAACTCAAACCATCTCCAACACTTATTCCCTCAAACTTTCACTTCACCATACACAAAAGATACCACAAAAACTACCATCCTCAATTGCAATGCACCTACTCTAAAAGGAGAAGTTAAAACATGCGCGAAATCCTTGGAAGAAATGATAGAGTTCTCAAAGAGAAGCTTGAAACAGAACCACCTAATTTCATTGACAACAGAAAGCATACAAGGGTCAGGACAGAAACTAAAAATTGAGAAATTTCATAAAATCAATTCCCAAAGGAGTGTCTCATGCCATGAGATATTCCTTCCTTTTGCTACATACTTTTGTCATTTGCTATCTTCAACTAACATTTACGCGGTGGAGCTAGTTGATTTAAACACTAATGTTCATGTTAATAAAGCTATGGTTGTTTGTCATATGGATACTTCTTCTTGGCCAGCTGATCATCCAGTTTTCAAAAAATTGAATTTTTCACCTGGAAATGGAGAGGTTTGTCATTGGATGTCACAAGCTGATCTTGTTTGGGTTGGAGATGATGCGCATGCATAAAATAATTTTTTAAAAAAAGTCTACTTATGTTAATTAAGCTTTGAGTTTAATTGTAAAAATGGATTGTCTTTTTTCTTGTTTCTATGTGTTTAGGAATAGTAAGGTATTGTAATTATGGGGAAAAAAGTCCAAATCCTTACTTTCCCTTTCTTGTGTGAAGTGTGAATTGTGATGGTTTTTGGTCTTTTTATGTGTATTTTAATAACTTGCAGTTAATACTCCTATTCTAAGTTACT</gDNA_template>
            <first_frame> I  F  C  T  S  E  T  N  A  Q  T  S  K  I  T  N  L  D  S  K  I  F  Y  T  T  R  T  P  D  Q  A  K  V  Y  A  K  L  P  N  Q  A  K  V  Y  P  S  K  I  P  N  Q  A  K  V  Y  T  T  K  I  P  N  L  D  S  K  I  F  Y  A  T  R  T  P  D  Q  A  K  V  Y  P  A  N  L  P  E  Q  A  K  V  Y  T  S  K  I  Y  A  T  S  H  S  H  S  H  H  L  G  E  V  S  F  F  R  V  S  T  L  K  P  G  N  T  V  H  L  D  N  L  V  N  P  F  P  H  R  S  F  L  P  S  Q  I  A  S  K  I  S  I  N  S  N  H  L  Q  H  L  F  P  Q  T  F  T  S  P  Y  T  K  D  T  T  K  T  T  I  L  N  C  N  A  P  T  L  K  G  E  V  K  T  C  A  K  S  L  E  E  M  I  E  F  S  K  R  S  L  K  Q  N  H  L  I  S  L  T  T  E  S  I  Q  G  S  G  Q  K  L  K  I  E  K  F  H  K  I  N  S  Q  R  S  V  S  C  H  E  I  F  L  P  F  A  T  Y  F  C  H  L  L  S  S  T  N  I  Y  A  V  E  L  V  D  L  N  T  N  V  H  V  N  K  A  M  V  V  C  H  M  D  T  S  S  W  P  A  D  H  P  V  F  K  K  L  N  F  S  P  G  N  G  E  V  C  H  W  M  S  Q  A  D  L  V  W  V  G  D  D  A  H  A  *  N  N  F  L  K  K  V  Y  L  C  *  L  S  F  E  F  N  C  K  N  G  L  S  F  F  L  F  L  C  V  *  E  *  *  G  I  V  I  M  G  K  K  V  Q  I  L  T  F  P  F  L  C  E  V  *  I  V  M  V  F  G  L  F  M  C  I  L  I  T  C  S  *  Y  S  Y  S  K  L   </first_frame>
            <second_frame>  Y  F  V  L  L  R  L  M  P  K  H  P  K  S  P  I  *  I  L  R  Y  S  T  Q  P  E  P  L  I  K  L  K  S  M  L  N  S  Q  I  K  P  K  F  I  P  P  K  F  L  I  K  L  R  S  T  Q  P  K  S  L  I  *  I  L  R  Y  S  T  R  P  E  P  L  I  K  P  R  S  I  Q  L  I  F  P  N  K  L  R  S  I  H  Q  K  F  M  Q  L  H  T  L  I  V  I  I  L  E  K  S  L  S  S  E  S  L  P  S  N  L  E  T  Q  S  I  *  T  T  *  *  T  R  S  L  I  A  H  F  F  H  H  K  L  P  Q  R  S  P  L  T  Q  T  I  S  N  T  Y  S  L  K  L  S  L  H  H  T  Q  K  I  P  Q  K  L  P  S  S  I  A  M  H  L  L  *  K  E  K  L  K  H  A  R  N  P  W  K  K  *  *  S  S  Q  R  E  A  *  N  R  T  T  *  F  H  *  Q  Q  K  A  Y  K  G  Q  D  R  N  *  K  L  R  N  F  I  K  S  I  P  K  G  V  S  H  A  M  R  Y  S  F  L  L  L  H  T  F  V  I  C  Y  L  Q  L  T  F  T  R  W  S  *  L  I  *  T  L  M  F  M  L  I  K  L  W  L  F  V  I  W  I  L  L  L  G  Q  L  I  I  Q  F  S  K  N  *  I  F  H  L  E  M  E  R  F  V  I  G  C  H  K  L  I  L  F  G  L  E  M  M  R  M  H  K  I  I  F  *  K  K  S  T  Y  V  N  *  A  L  S  L  I  V  K  M  D  C  L  F  S  C  F  Y  V  F  R  N  S  K  V  L  *  L  W  G  K  K  S  K  S  L  L  S  L  S  C  V  K  C  E  L  *  W  F  L  V  F  L  C  V  F  *  *  L  A  V  N  T  P  I  L  S  Y  </second_frame>
            <third_frame>   I  L  Y  F  *  D  *  C  P  N  I  Q  N  H  Q  S  R  F  *  D  I  L  H  N  Q  N  P  *  S  S  *  S  L  C  *  T  P  K  S  S  Q  S  L  S  L  Q  N  S  *  S  S  *  G  L  H  N  Q  N  P  *  S  R  F  *  D  I  L  R  D  Q  N  P  *  S  S  Q  G  L  S  S  *  S  S  R  T  S  *  G  L  Y  I  K  N  L  C  N  F  T  L  S  *  S  S  S  W  R  S  L  F  L  Q  S  L  Y  P  Q  T  W  K  H  S  P  S  R  Q  L  S  E  P  V  P  S  S  L  I  S  S  I  T  N  C  L  K  D  L  H  *  L  K  P  S  P  T  L  I  P  S  N  F  H  F  T  I  H  K  R  Y  H  K  N  Y  H  P  Q  L  Q  C  T  Y  S  K  R  R  S  *  N  M  R  E  I  L  G  R  N  D  R  V  L  K  E  K  L  E  T  E  P  P  N  F  I  D  N  R  K  H  T  R  V  R  T  E  T  K  N  *  E  I  S  *  N  Q  F  P  K  E  C  L  M  P  *  D  I  P  S  F  C  Y  I  L  L  S  F  A  I  F  N  *  H  L  R  G  G  A  S  *  F  K  H  *  C  S  C  *  *  S  Y  G  C  L  S  Y  G  Y  F  F  L  A  S  *  S  S  S  F  Q  K  I  E  F  F  T  W  K  W  R  G  L  S  L  D  V  T  S  *  S  C  L  G  W  R  *  C  A  C  I  K  *  F  F  K  K  S  L  L  M  L  I  K  L  *  V  *  L  *  K  W  I  V  F  F  L  V  S  M  C  L  G  I  V  R  Y  C  N  Y  G  E  K  S  P  N  P  Y  F  P  F  L  V  *  S  V  N  C  D  G  F  W  S  F  Y  V  Y  F  N  N  L  Q  L  I  L  L  F  *  V  T </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0117B06.1" strand="-"/>
                <serials PGL_serial="23" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="161941" stop="160967"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>972</number_coding_nucleotides>
                  <number_encoded_amino_acids>324</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IFCTSETNAQTSKITNLDSKIFYTTRTPDQAKVYAKLPNQAKVYPSKIPNQAKVYTTKIPNLDSKIFYATRTPDQAKVYPANLPEQAKVYTSKIYATSHSHSHHLGEVSFFRVSTLKPGNTVHLDNLVNPFPHRSFLPSQIASKISINSNHLQHLFPQTFTSPYTKDTTKTTILNCNAPTLKGEVKTCAKSLEEMIEFSKRSLKQNHLISLTTESIQGSGQKLKIEKFHKINSQRSVSCHEIFLPFATYFCHLLSSTNIYAVELVDLNTNVHVNKAMVVCHMDTSSWPADHPVFKKLNFSPGNGEVCHWMSQADLVWVGDDAHA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 90 chains have been computed
$ 
$ memory statistics:
$ 1551528 bytes spliced alignments in total
$ 39 spliced alignments have been stored
$ 39782 bytes was the average size of a spliced alignment
$ 35168 bytes predicted gene locations in total
$ 23 predicted gene locations have been stored
$ 1529 bytes was the average size of a predicted gene location
$ 19 megabytes was the average size of the backtrace matrix
$ 102 backtrace matrices have been allocated
$ 
$ date finished: 2009-01-15 13:01:42
-->
