<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-01-16 20:34:38"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C06HBa0167M06-FMABi/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E464780" ref_strand="+" ref_description="SGN-E464780 [cPRO-19-G5]">
      <seq>tttcggtgtaatttggaggaatagatgatagtggaggcggcgttggagtttttcttgccgtcgtggtgggaggtgcaagtcgccgtcgccgccgcgtccttcgtcatcctctcttgctggttcttcaacctcggcggaggtgatatagttcattatcgccctcgggttggccgttctcgtgctgtcagaagtgagaaagtggaggatgatccagcatgtagggctagtttgtgcacttattttgtagatgagccagttaaaaggagatcctcaaactacttctgcctatgtaatcaaggttgaattgttagctgctaaaaatcttactgctgctaatttgaatgggacttcagatccatatgcaatcatcagttgtggctcacaaaagagatttagttcaatggttcctggttcaagaaatcctatgtggggggaggagttcaacttctctgttgatgagcttccagtagagattaatgtgacagtatatgactgggatataatttggaaaaatgctgttcttggttcagtgatgatacctgttgaaaatga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0167M06.1" temp_strand="-" temp_description="C06HBa0167M06.1  AC211057.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0167M06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="10950" stop="7904"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="10650" g_stop="10423" g_length="228"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="228" r_length="228" r_score="0.961"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="10422" i_stop="9587" i_length="836">
            <donor d_prob="0.984" d_score="0.94"/>
            <acceptor a_prob="0.958" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="9586" g_stop="9517" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="229" r_stop="298" r_length="70" r_score="0.971"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="9516" i_stop="9359" i_length="158">
            <donor d_prob="0.988" d_score="0.96"/>
            <acceptor a_prob="0.998" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="9358" g_stop="9261" g_length="98"/>
          <reference_exon_boundary r_type="cDNA" r_start="299" r_stop="396" r_length="98" r_score="0.990"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="9260" i_stop="8537" i_length="724">
            <donor d_prob="0.928" d_score="1.00"/>
            <acceptor a_prob="0.959" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="8536" g_stop="8461" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="397" r_stop="472" r_length="76" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="8460" i_stop="8284" i_length="177">
            <donor d_prob="0.883" d_score="1.00"/>
            <acceptor a_prob="0.968" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="8283" g_stop="8204" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="473" r_stop="552" r_length="80" r_score="0.950"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0167M06.1" gen_strand="-" ref_id="SGN-E464780" ref_strand="+">
        <total_alignment_score>0.971</total_alignment_score>
        <cumulative_length_of_scored_exons>552</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0167M06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E464780" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="10650" e_stop="10423"/>
          <exon e_start="9586" e_stop="9517"/>
          <exon e_start="9358" e_stop="9261"/>
          <exon e_start="8536" e_stop="8461"/>
          <exon e_start="8283" e_stop="8204"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCGGTGTAATCTGGAGGAATAGATGATAGTGGAGGCAGCGTTGGAGTTTTTCTTGCCGTCGTGGTGGGAGGTGCAAGTTGCCGTCGCCGCCGCGTCCTTCGTCATCCTCTCTTGCTGGTTCTTCAACCTCGGCGGAGGTGATATAGTTGATTATCGCCCTCGGGTTGACGGTTCTCCGACTGTCAGAAGTGAGAAAGTGGAGGATGATCCAGCATGTAGGGCTAGTGTAAGTACAGTCTACTATGTATATACACACACACGCACACATACATACATAATAGTTTATTTTTACTATTTCAAAATTATGTATCTCCCTGTATTACTATCCTGTTTTAATTGAGTTTAGTTAAAGTGAGGATTAGGAATTGTAATTTGTGAAGAAATTATATTCCAATTAGGAAGTTTAGAATATGAAGTAGTAGATCACTGCTAAAGCGTTCTCGATAGAGGTGTGATGATATTTAATAAAATTTTAAGTTAAAAAAAATGAATCACTTGTAGAGTTGATCTAAAGTGTCATGTGTGATTGTCGATTAAATGATAAGCTGAAATTTGATTTCGCATGGACTAATTTTCATTAATTCTGATTTGGAATGACCAATATAAGAAGTTATAACGGAACTAAGTAATTAAGCTTTGGAGACTATAATATTTCTCGTAGTTTTTGTTTGTACTTAGCTTAATCTTGAAAAGCATCCATAGAGCATGGTTTTGTTATATATAGTTCATGGAAAGGAGCTAAGGAGCAAATGTATGATTATGTACATTCTGAATTCTTACTGAGAATATTCTTTCCAAGTCAAAACAAATTCAGCTTGAGCAGAGTTATTAAATTGCATGCAACTTCTTATATAGTTATAATACTGTACCATTCGTGAAGGCTAACTGTACTTGATTATTATCTGTTCGGCAACACAAACTATATGTTAAGCTTCTCAAGAATCCTCAATGGTCCGTAACTAGTAGGAATTTCCAATGTTCTTAGAAAGAAAATTCCCCTTGATAATTTATAAACTTATGTTTCGTTTTCATCATGTAATTTTCCACTTCTTTGACGTGCAGTTGTGCACTTATTTTGTAGATGAGCCAGTTAAAAGGAGATTCTCAAACTACTTCTGCCTATCTAATCAAGGTATATTTGTATTCCATGTTCATGCACTTATAACTCGTATATCTAGATTTGGTGTTGTACAACATTACTGTTACTTGAAGTGTTAATTGCACTAATTATTCATGTGATGGCCTATATCTGCAACTTGTAGTTGACTGCTACTCTTTCTTATATTTCAGGTTGAACTGTTAGCTGCTAAAAATCTTACTGCTGCTAATTTGAATGGGACTTCAGATCCATATGCAATCATCAGTTGTGGCTCACAAAAGAGATTTAGGTGATTATGTCTATTTTTATTATCCTATTGTCTTGGGTTGGTGGTATAAATAGTTTGTCTTGTCTAGGTGTAGTTATGCATATGGTTTTCTATTATTGTTGATTATATAACCAACTTGCATCATCAAATACCACATTTGTCATAATGTTGTTCAGAGGATATATATCTTTATACACTTACGTATAATAGATGATAAAACATTACTGGTGTTGATTTGTTCCATTATGATTGATATTCAGTTTTGCTTAGACAAGGATGCCTCTTTTATTTTGGTCAATTTATTCATCTTAGTTGGTTTCCTTTTATTGGTAGTGCATGCTAGTCTAGTACCAGATATGATTGTGTTTTAGGTACTTGTGATCTTTGAGTTCTTATCAATTTATTCTTATGGGAATAAACAATAGTATAAACAACTATGATGACGCTCATAATAGTGTCCAAATTAGATGAACTCCTTTTGACATGATATAAAGGAGAGAACAGATGAACAACTTTTTATATTTATTTTGTTGGTTAGCCTTAATTTTGAGACGATCTTTTTCTCTAATAGATGTATTGGTAGTTCAAGTCAAGGTCAACTGTAAGATAACCCTTTTTTTTAGTGGATTGTTGTCAACAATATCTGCGACGAGGCTTGGGTAGTTCCAGAAAGTTGTGATACAATATGTTCAGATGCTTATCGCTCTTGTATTATACACAAGTTATACTCTTCTTAGTGTTGCAGTTCAATGGTTCCTGGTTCAAGAAATCCTATGTGGGGGGAGGAGTTCAACTTCTCTGTTGATGAGCTTCCAGTAGAGGTAGCTATCCAGAATTTTTTTGACATAAAGCACAAACTTAGTGCAATGTGTGTTCTGTAATCCTCTTCAGATTTACTTTTATGTATTTGTCGTTTGATTATTTAAACGTTTAATATTACATTGGCTTCGTGTTTTTATTTTCTTTCATAATAATTCATTTACTTGATTGTTTGACAGATTAACGTGACAATATATGACTGGGATATAATTTGGAAAAATGCTATTCTTGGTTCAGTAATGATACCTGTTGAAAATGA</genome_strand>
        <mrna_strand>TTTCGGTGTAATTTGGAGGAATAGATGATAGTGGAGGCGGCGTTGGAGTTTTTCTTGCCGTCGTGGTGGGAGGTGCAAGTCGCCGTCGCCGCCGCGTCCTTCGTCATCCTCTCTTGCTGGTTCTTCAACCTCGGCGGAGGTGATATAGTTCATTATCGCCCTCGGGTTGGCCGTTCTCGTGCTGTCAGAAGTGAGAAAGTGGAGGATGATCCAGCATGTAGGGCTAGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTGCACTTATTTTGTAGATGAGCCAGTTAAAAGGAGATCCTCAAACTACTTCTGCCTATGTAATCAAG..............................................................................................................................................................GTTGAATTGTTAGCTGCTAAAAATCTTACTGCTGCTAATTTGAATGGGACTTCAGATCCATATGCAATCATCAGTTGTGGCTCACAAAAGAGATTTAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCAATGGTTCCTGGTTCAAGAAATCCTATGTGGGGGGAGGAGTTCAACTTCTCTGTTGATGAGCTTCCAGTAGAG.................................................................................................................................................................................ATTAATGTGACAGTATATGACTGGGATATAATTTGGAAAAATGCTGTTCTTGGTTCAGTGATGATACCTGTTGAAAATGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E229911" ref_strand="+" ref_description="SGN-E229911 [cLEL-33-M3](-)">
      <seq>tgtccgagcctatgttggtgcattgaataaaatgatgagtttcagaaaactaatggcgaaaaataacaaatcccaaagcagtgcagtcgtataggtacttctgtgcaaatcaaggttatggaacttttgcaactgcactggagctttatcatttgtacaaaatgtaggagtctgttcaaagaatttgagcctgtagttttcaagaaaacaaagcttaatatgtctggtagtgcttgaaaatcatctaagtttatggtgtatcagttggaacattagacacattgtccatataactttgttcatgctcccgtttaactaatttatgaatctacataccacgcaagattttcgaaatgatttcagaaattatgaaaatctctgtattaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0167M06.1" temp_strand="-" temp_description="C06HBa0167M06.1  AC211057.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0167M06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="25602" stop="24616"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="25302" g_stop="24923" g_length="380"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="380" r_length="380" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="386" polyA_stop="403"/>
      <MATCH_line gen_id="C06HBa0167M06.1" gen_strand="-" ref_id="SGN-E229911" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>380</cumulative_length_of_scored_exons>
        <coverage percentage="0.943" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0167M06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E229911" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="25302" e_stop="24923"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTCCGAGCCTATGTTGGTGCATTGAATAAGATGATGAGTTTCAGAAAACTAATGGCGAAAAATAACAAACCCGAAAGCAGTGCAGTCGTATAGGTACTTCTGTGCAAATCAAGGTTATGGAACTTTTGCAACTGCACTGGAGCTTTATCATTTGTACAAAATGTAGGAGTCTGTTCAAAGAATTTGAGCCTGTAGTTTTCAAGAAAACAAAGCTTAATATGTCTGGTAGTGCTTGAAAATCATCTAAGTTTATGGTGTATCAGTTGGAACATTAGACACATTGTCCATATAACTTTGTTCATGCTCCCGTTTAACTAATTTATGAATCTACATACCACGCAAGATTTTCGAAATGATTTCAGAAATTATGAAAATCTCT</genome_strand>
        <mrna_strand>TGTCCGAGCCTATGTTGGTGCATTGAATAAAATGATGAGTTTCAGAAAACTAATGGCGAAAAATAACAAATCCCAAAGCAGTGCAGTCGTATAGGTACTTCTGTGCAAATCAAGGTTATGGAACTTTTGCAACTGCACTGGAGCTTTATCATTTGTACAAAATGTAGGAGTCTGTTCAAAGAATTTGAGCCTGTAGTTTTCAAGAAAACAAAGCTTAATATGTCTGGTAGTGCTTGAAAATCATCTAAGTTTATGGTGTATCAGTTGGAACATTAGACACATTGTCCATATAACTTTGTTCATGCTCCCGTTTAACTAATTTATGAATCTACATACCACGCAAGATTTTCGAAATGATTTCAGAAATTATGAAAATCTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E224934" ref_strand="+" ref_description="SGN-E224934 [cLEL-27-P24](-)">
      <seq>agtgtccgagcctatgttggtgcattgaataagatgatgagtctcagaaaactaatggcgaaaaataacaaaccccaaagcagtgcagtcgtataggtacttctgtgcaaatcaaggttatggaacttttgcaactgccctggagctttatcatttgtacaaaatgtaggagtctgttcaaagaatttgagcctgtagttttcaagaaaacaaagcttaatatgtctggtagtgcttgaaaatcatctaagtttatggtgtatcagttggaacattagacacattgtccatacaactttgttcatgctcccgtttaactaatttatgaatctacataccacgcaagatttttgaaatgatttcaggaattatgtaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0167M06.1" temp_strand="-" temp_description="C06HBa0167M06.1  AC211057.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0167M06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="25604" stop="24628"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="25304" g_stop="24929" g_length="376"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="376" r_length="376" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="377" polyA_stop="393"/>
      <MATCH_line gen_id="C06HBa0167M06.1" gen_strand="-" ref_id="SGN-E224934" ref_strand="+">
        <total_alignment_score>0.981</total_alignment_score>
        <cumulative_length_of_scored_exons>376</cumulative_length_of_scored_exons>
        <coverage percentage="0.957" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0167M06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E224934" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="25304" e_stop="24929"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTGTCCGAGCCTATGTTGGTGCATTGAATAAGATGATGAGTTTCAGAAAACTAATGGCGAAAAATAACAAACCCGAAAGCAGTGCAGTCGTATAGGTACTTCTGTGCAAATCAAGGTTATGGAACTTTTGCAACTGCACTGGAGCTTTATCATTTGTACAAAATGTAGGAGTCTGTTCAAAGAATTTGAGCCTGTAGTTTTCAAGAAAACAAAGCTTAATATGTCTGGTAGTGCTTGAAAATCATCTAAGTTTATGGTGTATCAGTTGGAACATTAGACACATTGTCCATATAACTTTGTTCATGCTCCCGTTTAACTAATTTATGAATCTACATACCACGCAAGATTTTCGAAATGATTTCAGAAATTATGAAA</genome_strand>
        <mrna_strand>AGTGTCCGAGCCTATGTTGGTGCATTGAATAAGATGATGAGTCTCAGAAAACTAATGGCGAAAAATAACAAACCCCAAAGCAGTGCAGTCGTATAGGTACTTCTGTGCAAATCAAGGTTATGGAACTTTTGCAACTGCCCTGGAGCTTTATCATTTGTACAAAATGTAGGAGTCTGTTCAAAGAATTTGAGCCTGTAGTTTTCAAGAAAACAAAGCTTAATATGTCTGGTAGTGCTTGAAAATCATCTAAGTTTATGGTGTATCAGTTGGAACATTAGACACATTGTCCATACAACTTTGTTCATGCTCCCGTTTAACTAATTTATGAATCTACATACCACGCAAGATTTTTGAAATGATTTCAGGAATTATGTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E741064" ref_strand="+" ref_description="SGN-E741064 [GI|2213883]">
      <seq>tctcttacttgaattttcagtctcttctcccagccgccattaaaaccagcactcgcaaactccaatttctcttctccggcaatggcgtctatcaccgcaaatcatccaatctccggtaaaccattaatctcattccgtcccaaaaaccctttacttcaaacccaaactctcttcaatttcaaaccatcaatctccaagcactccaattcttcattttccattcccgttgtccgctgctcaatccgccgtataccggaatatactccgagtcacattcccgatccaaactacgtccggatattcgacaccactctccgtgatggcgaacaatcaccaggggctacaatgactacaaaggagaaactggatgttgcgcgtcagtcagctaagcttggtgttgatataattgaggctggttttcctgcttcttctgaagctgatcttgaagctgtgaaattgatagctaaggaagttgggaatggtgtttatgaagaggaatacgttccggttatttgtggattggcgaggtgtaataagaaggatattgataaggcgtgggaggctgtgaagtatgctaagaaaccgaggattcatacgtttattgctacaagtgaggtacatatgaattataagctgaaaatgagtagagatcaagttgttgagaaagctaggagtatggtggcttatgcaaggagtattgggtgtgaggatgttgaatttagccctgaagatgctggaagatctgatccggagtttctttatcatatcttgggagaggttatcaaagctggggcaacaacccttaacatccctgatactgttggatacactgtacccgaagaatttggacaattgattgctaaaataaaagcgaataccccaggagttgaagatgtgatcatttcaacacactgccagaacgatcttgggctttctactgccaacaccttagctggagcatgtgcaggtgcaagacaattggaagtgaccatcaatggaattggtgaaagagctggaaatgcttctttagaggaggttgtaatggccttaaagtgtcgtggagagcaagtactaggtggcctatatacagggattaatacacaacatatactcatgtcaagcaagatggtagagggtatttcgggacttcatgtgcaaccacacaaggccattgttggagctaatgcttttgttcatgaaagtggcatccatcaggatggaatgttaaaacacaaagatacatatgagattatatctcctgaagatattgggcttaatcgtgctaatgaatctggtattgtcttcgggaaactcagtggggtcatgctttgcaagccaaaaatgcttgagcttggatacgagattgagggaaaagaacttgatgacctgttctggcgattcaaatctgtggctgagaagaaaaagaaaattacagatgatgacctggtagcactgatgtcagatgaagttttccagcctcaatttgtgtggcaacttcaaaatgtacaggttacttgtggaagtcttggcctttctacagcaaccgttaagcttattgatgctgatggtcgagagcatatttcttgttctgttggaacggggccagttgacgcggcttataaggcagttgatctcattgttaaggttcctgtaacactccttgagtattccatgaatgcagtcacacaaggtatagatgctatagcttcaaccagagtcttgattcgtggagaaaatggccatacatcaacccatgccttaactggagagactgttcaccgtacatttagtggaaccggagcagatatggatattgtcatctccagtgtccgagcctatgttggtgcattgaataagatgatgagtttcagaaaattaatggcgaaaaataacaaacccgaaagcagtgcagtcatataggaacttctgtgcaaatcaaggttatggaacttttgcaactgcactggagctttgtcatttgtacaaaatgtaggaggctgttcaaagaatttgagcctgtagttttcaagaaaacaaagcttatatgtttggtagtgcttgaaaatcatttaagtttatggtgtatcagttggaacattagacacattgtccatataactttgttcatgctcccgtttgactaatttatgaatttacataccacgaagattttcgaaatgnaaaaaaaaaaggaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0167M06.1" temp_strand="-" temp_description="C06HBa0167M06.1  AC211057.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0167M06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="35128" stop="24647"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34828" g_stop="34089" g_length="740"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="740" r_length="740" r_score="0.991"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="34088" i_stop="33112" i_length="977">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="33111" g_stop="32898" g_length="214"/>
          <reference_exon_boundary r_type="cDNA" r_start="741" r_stop="954" r_length="214" r_score="0.986"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="32897" i_stop="32817" i_length="81">
            <donor d_prob="0.928" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="32816" g_stop="32736" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="955" r_stop="1035" r_length="81" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="32735" i_stop="32231" i_length="505">
            <donor d_prob="0.903" d_score="1.00"/>
            <acceptor a_prob="0.768" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="32230" g_stop="32138" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="1036" r_stop="1128" r_length="93" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="32137" i_stop="32053" i_length="85">
            <donor d_prob="0.851" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.88"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="32052" g_stop="31966" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="1129" r_stop="1215" r_length="87" r_score="0.908"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="31965" i_stop="29182" i_length="2784">
            <donor d_prob="0.999" d_score="0.94"/>
            <acceptor a_prob="0.988" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="29181" g_stop="29081" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="1216" r_stop="1316" r_length="101" r_score="0.980"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="29080" i_stop="28616" i_length="465">
            <donor d_prob="0.999" d_score="0.96"/>
            <acceptor a_prob="0.984" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="28615" g_stop="28582" g_length="34"/>
          <reference_exon_boundary r_type="cDNA" r_start="1317" r_stop="1350" r_length="34" r_score="0.912"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="28581" i_stop="28505" i_length="77">
            <donor d_prob="0.989" d_score="0.00"/>
            <acceptor a_prob="0.668" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="28504" g_stop="28430" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="1351" r_stop="1425" r_length="75" r_score="0.987"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="28429" i_stop="27686" i_length="744">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.924" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="27685" g_stop="27602" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="1426" r_stop="1509" r_length="84" r_score="0.988"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="27601" i_stop="27504" i_length="98">
            <donor d_prob="0.957" d_score="0.98"/>
            <acceptor a_prob="0.667" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="27503" g_stop="27369" g_length="135"/>
          <reference_exon_boundary r_type="cDNA" r_start="1510" r_stop="1644" r_length="135" r_score="0.978"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="27368" i_stop="26067" i_length="1302">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="26066" g_stop="25921" g_length="146"/>
          <reference_exon_boundary r_type="cDNA" r_start="1645" r_stop="1790" r_length="146" r_score="0.973"/>
        </exon>
        <intron i_serial="11">
          <gDNA_intron_boundary i_start="25920" i_stop="25339" i_length="582">
            <donor d_prob="0.994" d_score="0.96"/>
            <acceptor a_prob="0.979" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="12">
          <gDNA_exon_boundary g_start="25338" g_stop="24964" g_length="375"/>
          <reference_exon_boundary r_type="cDNA" r_start="1791" r_stop="2164" r_length="374" r_score="0.973"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="2194" polyA_stop="2235"/>
      <MATCH_line gen_id="C06HBa0167M06.1" gen_strand="-" ref_id="SGN-E741064" ref_strand="+">
        <total_alignment_score>0.982</total_alignment_score>
        <cumulative_length_of_scored_exons>2165</cumulative_length_of_scored_exons>
        <coverage percentage="0.969" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0167M06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E741064" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34828" e_stop="34089"/>
          <exon e_start="33111" e_stop="32898"/>
          <exon e_start="32816" e_stop="32736"/>
          <exon e_start="32230" e_stop="32138"/>
          <exon e_start="32052" e_stop="31966"/>
          <exon e_start="29181" e_stop="29081"/>
          <exon e_start="28615" e_stop="28582"/>
          <exon e_start="28504" e_stop="28430"/>
          <exon e_start="27685" e_stop="27602"/>
          <exon e_start="27503" e_stop="27369"/>
          <exon e_start="26066" e_stop="25921"/>
          <exon e_start="25338" e_stop="24964"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTCTTACTTGAATTTTCAGTCTCTTCTCCCAGCCGCCATTAAAACCAGCACTCGCAAACTCCAATTTCTCTTCTCCGGCAATGGCGTCTATCACCGCAAATCATCCAATCTCCGGTAAACCATTAATCTCATTCCGTCCCAAAAACCCTTTACTTCAAACCCAAACTCTCTTCAATTTCAAACCATCAATCTCCAAGCACTCCAATTCTTCATTTTCCATTCCCGTTGTCCGCTGCTCAATCCGCCGTAGACCGGAATATACTCCGAGTCACATTCCCGATCCAAACTATGTCCGGATATTCGACACCACTCTCCGTGATGGCGAACAATCACCAGGGGCTACAATGACTACAAAGGAGAAACTGGATGTTGCACGTCAGTTAGCTAAGCTTGGTGTTGATATAATTGAGGCTGGTTTTCCTGCTTCTTCTGAAGCTGATCTTGAAGCTGTGAAATTGATAGCTAAGGAAGTTGGGAATGGTGTTTATGAAGAGGGATATGTTCCGGTTATTTGTGGATTGGCGAGGTGTAATAAGAAGGATATTGATAAGGCGTGGGAGGCTGTGAAGTATGCTAAGAAACCGAGGATTCATACGTTTATTGCTACAAGTGAGATACATATGAATTATAAGCTGAAAATGAGTAGAGATCAAGTTGTTGAGAAAGCTAGGAGTATGGTGGCTTATGCAAGGAGTATTGGGTGTGAGGATGTTGAATTTAGCCCTGAAGATGCTGGAAGGTTTGGACTTTTACGCCTACACATTAAAAACTTCCAAAATTTCATTTCTATACATTTTTACAACTTTCAAAAATGTAAAGTTATTCAAAATTTGAACTTTGATGTGTTGACTGGACTCTTTACCATCACTTTGCTATTTTTTCATTTTCAGTAGTTTAATATAAAATTGATAATATAATATTTATGTTAATTAGCATCTAAACTTTTCGTTCTCCCATCACATAGCATTATATACTTGCTTTGAGCTATCATCATTGATAGAATTGTTGATTCTGGGACTTTTTCTTCTTGAATGGAGATAATTATTGAGTTTAGGCTAGCTATCCACAAAGTTGCCAATGGGGGACTAAGGAATAGATTGGACTTATTTCCTTGTTTCTTTTTTGGATTAATCATGCTCGTTATGGTCTTATATGTTGAACTGATAGTTGTATGCAGATAGTGTTATATAAATTCAGATGTTTATTTAAAAGTGTCTCGTAATTTAGCTGGCGAATGATCCTGAAAAATCCTGAAAAGTTTCTGGAGAAAATTTCATCAAGAGTCTGTTAACACCAAACTTGTCTTATTAAACAGACATGTTTATGGCATTCTTTTTAACAAGCGCATGGGAGACCTTGAAATTATGACTCTTTTCCCTTTCAACCGAACACTTAAAAGATAATAAGACCTTGTGTACTGTAATTTGCCTTTTCCTATCAAGAAGTTCTTTGGTATGATGCTTTGAGATCTCAAAGAAGAGGGTTAAACTACCATGTTTTATTCTGTTGCCATGTATAAAAGTTTGTAGACTAGCTCAGTGATTAGAATCGACAATGGGAACCACTTTCATGCATTGTGCTAACTGGGATCTGTTCTTTTTGCTGATCTGAGCCTTGTTTTCCTGTTTATTTGCACTACCTCCTTGGTACTAGCTTTAATAATATTAATTTACTTTATGAAAAAAAAAAAACTTATTTCCTGTTTTTTCCTCTCAGATCTGATCCAGAGTTTCTTTATCATATCCTTGGAGAGGTTATCAAAGCTGGGGCAACAACCCTTAACATCCCTGATACTGTTGGATACACTGTACCCGAAGAATTTGGACAATTGATTGCTAAAATAAAAGCGAATACCCCAGGAGTTGAAGATGTGATCATTTCAACACACTGCCAGAACGATCTTGGGCTTTCTACTGCCAACACCTTAGCTGTATGTGGTTCAATGTTGATGAGAACCTAGATGTTTATGCCATCTTAAGTTGTATGCACATTAAAGCGTGTCCAATTTCAGGGAGCATGTGCAGGTGCAAGACAATTGGAAGTGACCATCAATGGAATTGGTGAAAGAGCTGGAAATGCTTCTTTAGAGGAGGTGTGTGAGGGCTTTCCGCTGAGAAATTTCAGTTCTCTTATGTGCATGATTTGGGCTCCAAAATTTGAGGGGTGGAATCACTAATTAAACAACCTTGACTATAAGTTCCCCTCTGTTCTTTCCTTGAAAAAAAGTTAGGTCTTCAAAGAAATTTCCCATAATTGCGTAAGGCATTCTCCACACAAAAGGAACTATTCCACCTCTTCCTAGAGTAAATTAACATCTTTAATTTAGACTGAATGACTGATACTAGAGTAGAAGTTGTGTGGTATGTAATATTATTCTTTTGCAAAACAATAGTTGCAAACATGCAACCGTATTTTGCCATTTTGGTCTTTGGAGCCAATTTCTGCCATTGGTTGTGTTATGTGCTGTTTAAACTGACAAACTACTGACGTTCATGAGACTCCTTTTTCCTCTGTGGTACTTGTTTGTCTTTGGTTTTCATCTTGGGCATGTCGGGCCTTCATTTTCTAACCTTTTACCATGTCCAATGCCGGAATAGGTTGTAATGGCCTTAAAGTGTCGTGGAGAGCAAGTACTAGGTGGCCTATATACAGGGATTAATACACAACATATACTCATGTCAAGCAAGATGGTTTGTACCCCTACTATCTCATAGTATGGTGATCTTTTACTGGTTAATATTCTTCCAATATGCATTCTGACCCTTTATCGTGCAGGTAGAGGAGTA-TTCCGGACTTCATGTGCAGCCACACAAAGCCATTGTTGGAGCTAATGCCTTTGCTCATGAAAGTGGCATCCATCAGGTTTGTGTAATTTGCTCTCGTTTATTGTTGAAAGAAACAATTCCTGAAAGAGGCAAATCTTCTTACCAGTTTATGGACATCTTTTCTTTTCAACGATCAACCAAATTACTGATGGAATGGTGTTCCAAGTTCCCTGATTTACTTCCCCAGACCTCATAGATTTCAGCTTAACAGCAGCTCTTCTGTAGTCCTGAGAAAGAGACTCTAGCTCTATGAGTTGAAGGAGCAATGAAGAAATAAATGGTTGAGTCGTCACTTTGCTTTCAACGAAGGCAAACCAAATACATATATTGAAACCCCTTTTCTGAAGATTTTCATGTTTAGGGCGAGGTTCTTTTGTCATCAACCAAGCAAAACAATCGAACTTTCAGAGGTTCCCTATTTTCCCAAATGCATTTCCAAGGCCAATTTTCAATGACAGCGGGATTTATCCCTGATAACAGGATTTGACCGTGAAAATTCCGTTAAGATCATATTTTCACTTTAGAGAATCAGACCGGAGTTGAAGGGTGGGGGGTGGTTCTATGGCGTCTGAGAAGCAAAAAGCACAGTTATCCAATTCCCAATCATTAATATTGAGCATGAATCTGATGTTCCAGCCTTTTTCACTCCTGTAATCTGACAGAGATGCTTCAGAATTTGGCGCCATAGTGAATAATGTTGGGTACTGGTTTTTGGAGGTTATTGCACAAGTCACATATCTATCCAAGACCTTACTTTCCAGCCATTTTCAATTACAGTTGAGGTCTTGGATAGAAAGAGTCCTACTGTGCACTCATATGCCTCCATACACCACATGAATTAGGAAAATTTGGATGTTTCGTAATCCATGGGTTGGAAAGTCTGTATTTAGCCGTAATAACATCTCTCCATAAAGCTCCCTCCTCCCTATTAAATCTCTAGAGCCGTTTGTGTTGCAAGAAAATACTATGAACCCTCAGATATTTGTTCCCCATGCCCCCAGCCTTCTTGTCAGTAGAAACCGTATCCCTTTTTGAAAGACTTGTTTTGTCTATTCCCTTGTCACAGAAAATCCCTTTACACACTATTGATTAGTACTAGCCTACCTTCCAATGAGTGATGTTATGATAACTTCCTTTTTGCACTTTTCCTCCCATCCCAGATTGTAGTGGCTTGAGACTTTGACCCCAAAGGAAGGCTGAAAGCCTAATTGTTTAATGGGAAAAGAGCCTACTCCACAACTCAAGGTGTCAGCTATTTCCTATAAGTTGATCATTTCGTTCACAGGACAAAAAACACTCTTTGTATAATTAACTTGAAGACCATAATTCGCTTTGAAGAACAAAGTACCATATGAAGTTGTACAATCTGATCATTTCAGTTTTGCAAAAAAAATAAAATAAAAAAATAGAGTGAATCATCTGCATAGAAAAGGCAAGTAAGATGCAGTTTTCCTTGATTTCTCAGACTTGGGTTAAAGCCTTTTATCTTGTCATGTAGTTTTGCTGTTGACAACATTCTTCTTAGACATAACATATCCAAGATAAACAGAAAAGGAGAAAGCGAATCTTCTTGTCTAAAACCTTTTGGTGAAGCAAAAAAGTCTTTAGGTGATCCATTTATGATAATGGATGACATGACAATGGAGATGCAAAATTGGATCCACTTGATTTATTTATTGCCGGAGCTCATGAATTTTAATATGTTGACAAGGATAGGGTGGCAATGGGGCAGGTCATGGGCGGGGCTGGGCAGGGTAAAGAATTAACTTGGCAGGGTGGGGCAATATTTAAATGGGGCAGGGCAGGACAGGTCATAGCTAATATTTTTTTAAAATTTTAATAGTGCAGGGCAGGTGTGAGTTCATGAGAGGTTCCTTAGTGTTTTGAACACTGTAGCTTGCTAGCAATGCTTAGGTTGAATCCCGAAGGAAGTTTTCCGATGTTTCTGAGCATATAATTATCCTTTATTCGGGTTATTTGATTAACAAAAAATTTAAGAATTCATTTGCGTTTTGAACACTGTAGCTTTTTACTTATATTTAACCAGTTTATCACTTTGTGTTATTTAAAAGTTAAACAGAACATTAAAAAGTGGGAAAAATAAATTAACACTTAAATGGGGCAGGGCGGGCAAAATGTTGGAAAATTCTAGGCAGAGCAGGGTAGGGCGGGTTAAATTCTTAACGGGTCAAGGCTTGCTCAGCGCTAGCCATCCCTATCGCCATCCCTGGATAAGGGATTCCAATGAACGTTGTCAAAGACTTTCTCGCTCACAGCTTAACGTGAGACGTTTAAGATAAACTGAGAAGCCTCAAAGACCCAACAAACAATTAGAAGTTGCTCCAAGTTTTCCTTCTTGGGGCATTAGATTATAATAAACATTTGGTACCAATATTCCAGGAGGTGCAGAGATATTATACCTACTGACGTAAAAGAACTTCCATCAGGAGTTTGAATCTGCTTACTCTTTTATATTTCTGATTATTCATTTGTTTATGGCCCTTCTCATTTTAGATGTGTAGTTACTGATCTTATATTTGAATATCTATGGATAAATCTTCCACATATTTAGTTAGAGCTCGATTAATTGTCCTGTTAGCATTTGTTTTTGATTCATCTTCAAATGCATAAAGTTTTTCAGTTAAACTTCTTTGAATATATGTAGTATATTATGTCTCTCCTCCCGTTTCTTCCTTACCTCAAAGCTGGATTCGCACCTTTTTGTAACCGTTCAGTTGTGAATCAAAAAAAAAAGGAAAAAATATTTCAGTTTTTCCTTTTCAATCTCTTCTCCTTCTTAAACTACTTTTATGCTCTTTAGGATGGAATGTTAAAACACAAAGATACATATGAGATTATATCTCCTGAAGATATTGGGCTTAATCGTGCTAATGAATCTGGTATTGTCCTTGGGAAACTCAGGTATGTGATTTACCAATCAATGCTTATTGCTGTGATAGCTTAAGTGTTAGATTTCTGCGCTGTTTGAGTTTTTAGTTTTTATCCCTTGATTATTGAACTTGCTTAGCAAAGTACATTCTTTTAGTTGCTATGAGGTTAGTATTTCTTTAGTACTTGAGTAAGGCTTCCCTGATCCATAGACACTCACACAGTTGCTGTTTCAAATAGTGAATCATACCTTTGTTGTTTTAAAACAGTGTGGAGGTATATAGGAACTTCCTCTCTTCTATGGAGAGGTAAAGTAGAAGCTTATTGAGTTTGCCTCACTTTAATATGGTCAGAGCCACAATTGCATGAAATAATTATCATCACAGTCTGTAACTTAATCCCTCTCGTGCCCTCCTTCCTAACCTGCTCTATTCATTATTTACATTGAATTACATCATGTCTTCAAGGAAATTGATACGTTGAACATTTTTTTTGTAGTGGGCGTCATGCTTTGCAAGCC-AAAATGCTTGAGGTAAATTGCATGCTCTGAGAATTTTGTTTATTTCTTAAATTTAAGAGCACGAGACAAATCGTTTTAGTCCTATGCAGCTTGGATACGAGATTGAGGGCAAAGAACTTGATGACCTGTTCTGGCGATTCAAATCTGTGGCTGAGAAGAAAAAGGTGAATTAAGATTTTGAAATTTCCACTGTTGTTTGGTATATTTACGTCATCATTCAAATGCATTTGGAGTGGTGGAGTTTAGTAAATTTGCTACATTGAAAATTCATGGAAGGGGATTGATGGCTGGAACATTTTCTCCTTTCTAGGTAACCTAGTGACTAGAACATGAGCTAAAAATATAGTTACGATCTCTCTCTCTCTCTCTCCCTTTTCACATTCAGTAAATCTTAAGTACGTCACATCTTCAAATTTTGTGAATTTTAGTGTCTTTATTCATCTATGTATCTGGGTTGTACATTAATTTTTGTGGAGTAGGAAACAACTGGTGTGTAAGAACTTCTAAGATATTGTGAAGTGAGATGAACTAAAGTATCAGAAAAGGTGGAAGTGAGAGTAGAAACAGATAAAGAAAATTGAGCATGAATGCGAATGGAAAGATTGGGCAGAGTTCAGGATACCTTCTGAACCAAGATAATCTGTCCTATTATTACTGGTATATTATAAAGTATAAACTACAGCTTTTCTCAAGGTGGGGAAACTGTCAAATTTGTGCTAAGACCCTTTAAACCTTCTTTTGGTTGTCAAAGTTTCCTCTGCTCATTTGAAAGGGTTATTTGGCTAATTATACTTTTATCAGTTAAATTATAATTAAAATTAAGGTTAAGAACTGTGTGGATCTCATATGATATTGGTATCGTGGACATATTTTTTGGCCATCTATTTATCTCCACGCTGCTATTTCAGAAAATTACAGATGATGACCTGGTAGCACTGATGTCAGATGAGGTTTTCCAGCCTCAATTTGTGTGGCAACTTCAAAATGTACAGGTAGATATTAATGTTGACTATATCTGCACTGTTTTAACTTTGATCTGGATTAAAAAGGATGGTTCAGCTGATTGAAAGACTTCCTGCTCTATGGACAGGTTACTTCTGGAAGTCTTGGCCTTTCTACAGCAACTGTTAAGCTCATTGATGCTGATGGTCGAGAGCATATTTCTTGTTCTGTTGGAACGGGGCCAGTTGACGCGGCTTATAAGGCAGTTGATCTCATTGTTAAGGTATGAAATAGAAATGAAACTCCTAATAATAAATAATCTTGTCACAGTGCTAGGACCCATGTTGATTGCAAGCCGATCAGTATGTTATATTCAACTATAAATGGTTAATTACAAACTCATTTGGTGAATCTCTTTTATGCAAATCGTATTCATAATTATACATATACTAATATTATTTTTCCCCAGGCTATAGATGCATCAAGTTTGAGTTCTGTTGAGCAAAATATTTGGAAGCTCGTGATTTTTGATATATTGTCTTGTTGTGTCCTCTTACCTGTACTTTTTCCTCCGTCATATGTACTACATATAAAGTTGTCTTAGGGTGCACCAAGGTATGGACTAATGGTAAAAGAAGTGGGTTTAGAACTATGAGGTCTCGGGTTCAAATTCCTCAGAGACAAAACAAATAGGTGATTTCTTCTCATCTGTCCTAGCCTTAGTGGACAGATTACCTCATACCTATCCCGTGGAATTAGTCGAGTTGTCTGAAAGCTGGTCCAGACACCACGGTTATCCAAAAATAAAAGTTACCTTAGGGTCAATTGTTCTTTTGTACAACAGTATTCTTGCTGTTGAAGAAGTCGGGTCAACCCAAGTATATGTTGTACTTAAAAACTAAGAGCCTGTTTGGATTCACTTGAAAGTTGGTCAAACCTACTTTTAAGTCATTTTTAGTTTTGGGGATTGTTTGACATGGTTAAAAATAAGTTTAAAATGACCCAATCCAAACGGGCTCTAAGACTACATAATAAACCTCATGTGGAGTCCTATTCTAAAGCTAGTCCAAACCTAACCCAGCATCTAGTGCTGTATTCAATGATGACATCAGCAGACAACCCAAATCCTACATAACAAATGCAATTTTGCTATAATGTGCTGGGAAGATATTGCCGAGAATCTATTGGAAATAACCTCTCAACCTTTACAAGGCAGGGGCAAGGCTACGTACACACCACCCTCCCCAGACCCCACTTGTTTACACTGGGTGTGTTGTTGTACTGCGAAGATATCTTTTAAGAGCAGTTTTATCATTTTCCATATAATTGATGGACCTACTAGCTTTATAATAACTTCCCAAAAATAATTAAAACTATATTTGATATGCATTTTGAGTAGGAATTTTTACATTTTGAATTTGACTTACAAGCAGTTTTCTATATATCTTGAGAGAACCCAACTTTTTTGTTCGAGAAGATGGTGTTTGCCTCTAAATCAGCAGTCAAACTTGTCTCTATTTAATAATCTCTTTGGTTTAATGTGTATTATGGTCTGGTAATTCTAGTGTTCATGCATTTTGTGCAGGTACCTGTAACACTCCTTGAGTATTCCATGAATGCAGTCACACAAGGTATAGATGCTATAGCTTCAACCAGAGTCTTAATTCGTGGAGAAAATGGCCATACATCAACCCATGCCGTAACTGGAGAGACTATTCACCGTACATTTAGGTATGAAATGTACCAGCCATGTTGTTTGCATTTATTCTTCTTTCGCTGATAGAACCTAGGGAACATGGAGAGAGAGGGAGGGGGGCATGTAGGTGTTGACACAGTAAATTTTAGAATTGGCGACATGACATCAATGAGCCAAATTTATATGTTTTCAATAAAGCATAACCACAGTAGTCACAAGATTCATGTTTACTCTCCCCTTCTCTTCACCATTCTTCTATAATGCAGCCTTCACCCAACAAAAGATCAACTTCCAGGCCTCTTGCTTATTTTCTCCATTGACTGCCCTCACCCTTTGTGTTTCCTCATCACTGCAACCCCTCACATGACTGCTCCCAACTGTTACTCTCGTGCCTCCAAGTTCTTTCTTCAATCTCCCATTTTTCCATTAGACTTGTCCAAAAGAAACACCAGTGTTAGTGTGTGTATCAAGTAGAAGAGTCAAAATCCGTAGTAGATATGCTTGGCTGGATGTCAATCATGTGTTCAACGTCACTTTTTTCTGGGGCAAGTCTGTGAAATATCACCTTTCATTTCTCTCATTAGAAAAGGCTTTTTATATCTTCTATCTTCTTCCAGTGGAACCGGAGCAGATATGGATATTGTCATCTCCAGTGTCCGAGCCTATGTTGGTGCATTGAATAAGATGATGAGTTTCAGAAAACTAATGGCGAAAAATAACAAACCCGAAAGCAGTGCAGTCGTATAGGTACTTCTGTGCAAATCAAGGTTATGGAACTTTTGCAACTGCACTGGAGCTTTATCATTTGTACAAAATGTAGGAGTCTGTTCAAAGAATTTGAGCCTGTAGTTTTCAAGAAAACAAAGCTTAATATGTCTGGTAGTGCTTGAAAATCATCTAAGTTTATGGTGTATCAGTTGGAACATTAGACACATTGTCCATATAACTTTGTTCATGCTCCCGTTTAACTAATTTATGAATCTACATACCAC</genome_strand>
        <mrna_strand>TCTCTTACTTGAATTTTCAGTCTCTTCTCCCAGCCGCCATTAAAACCAGCACTCGCAAACTCCAATTTCTCTTCTCCGGCAATGGCGTCTATCACCGCAAATCATCCAATCTCCGGTAAACCATTAATCTCATTCCGTCCCAAAAACCCTTTACTTCAAACCCAAACTCTCTTCAATTTCAAACCATCAATCTCCAAGCACTCCAATTCTTCATTTTCCATTCCCGTTGTCCGCTGCTCAATCCGCCGTATACCGGAATATACTCCGAGTCACATTCCCGATCCAAACTACGTCCGGATATTCGACACCACTCTCCGTGATGGCGAACAATCACCAGGGGCTACAATGACTACAAAGGAGAAACTGGATGTTGCGCGTCAGTCAGCTAAGCTTGGTGTTGATATAATTGAGGCTGGTTTTCCTGCTTCTTCTGAAGCTGATCTTGAAGCTGTGAAATTGATAGCTAAGGAAGTTGGGAATGGTGTTTATGAAGAGGAATACGTTCCGGTTATTTGTGGATTGGCGAGGTGTAATAAGAAGGATATTGATAAGGCGTGGGAGGCTGTGAAGTATGCTAAGAAACCGAGGATTCATACGTTTATTGCTACAAGTGAGGTACATATGAATTATAAGCTGAAAATGAGTAGAGATCAAGTTGTTGAGAAAGCTAGGAGTATGGTGGCTTATGCAAGGAGTATTGGGTGTGAGGATGTTGAATTTAGCCCTGAAGATGCTGGAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTGATCCGGAGTTTCTTTATCATATCTTGGGAGAGGTTATCAAAGCTGGGGCAACAACCCTTAACATCCCTGATACTGTTGGATACACTGTACCCGAAGAATTTGGACAATTGATTGCTAAAATAAAAGCGAATACCCCAGGAGTTGAAGATGTGATCATTTCAACACACTGCCAGAACGATCTTGGGCTTTCTACTGCCAACACCTTAGCT.................................................................................GGAGCATGTGCAGGTGCAAGACAATTGGAAGTGACCATCAATGGAATTGGTGAAAGAGCTGGAAATGCTTCTTTAGAGGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTAATGGCCTTAAAGTGTCGTGGAGAGCAAGTACTAGGTGGCCTATATACAGGGATTAATACACAACATATACTCATGTCAAGCAAGATG.....................................................................................GTAGAGG-GTATTTCGGGACTTCATGTGCAACCACACAAGGCCATTGTTGGAGCTAATGCTTTTGTTCATGAAAGTGGCATCCATCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGGAATGTTAAAACACAAAGATACATATGAGATTATATCTCCTGAAGATATTGGGCTTAATCGTGCTAATGAATCTGGTATTGTCTTCGGGAAACTCAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGG-GTCATGCTTTGCAAGCCAAAAATGCTTGAG.............................................................................CTTGGATACGAGATTGAGGGAAAAGAACTTGATGACCTGTTCTGGCGATTCAAATCTGTGGCTGAGAAGAAAAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAATTACAGATGATGACCTGGTAGCACTGATGTCAGATGAAGTTTTCCAGCCTCAATTTGTGTGGCAACTTCAAAATGTACAG..................................................................................................GTTACTTGTGGAAGTCTTGGCCTTTCTACAGCAACCGTTAAGCTTATTGATGCTGATGGTCGAGAGCATATTTCTTGTTCTGTTGGAACGGGGCCAGTTGACGCGGCTTATAAGGCAGTTGATCTCATTGTTAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCCTGTAACACTCCTTGAGTATTCCATGAATGCAGTCACACAAGGTATAGATGCTATAGCTTCAACCAGAGTCTTGATTCGTGGAGAAAATGGCCATACATCAACCCATGCCTTAACTGGAGAGACTGTTCACCGTACATTTAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGAACCGGAGCAGATATGGATATTGTCATCTCCAGTGTCCGAGCCTATGTTGGTGCATTGAATAAGATGATGAGTTTCAGAAAATTAATGGCGAAAAATAACAAACCCGAAAGCAGTGCAGTCATATAGGAACTTCTGTGCAAATCAAGGTTATGGAACTTTTGCAACTGCACTGGAGCTTTGTCATTTGTACAAAATGTAGGAGGCTGTTCAAAGAATTTGAGCCTGTAGTTTTCAAGAAAACAAAGCTT-ATATGTTTGGTAGTGCTTGAAAATCATTTAAGTTTATGGTGTATCAGTTGGAACATTAGACACATTGTCCATATAACTTTGTTCATGCTCCCGTTTGACTAATTTATGAATTTACATACCAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E732107" ref_strand="+" ref_description="SGN-E732107 [LB01BB11]">
      <seq>acgtgattgagggcaaagaacttgatgacctgttctggcgattcaaatctgtggctgagaagaaaaagaaaattacagatgatgacctggtagcactgatgtcagatgaggttttccagcctcaatttgtgtggcaacttcaaaatgtacaggttacttctggaagtcttggcctttctacagcaactgttaagctcattgatgctgatggtcgagagcatatttcttgttctgttggaacggggccagttgacgcggcttataaggcagttgatctcattgttaaggtacctgtaacactccttgagtattccatgaatgcagtcacacaaggtatagatgctatagcttcaaccagagtcttaattcgtggagaaaatggccatacatcaacccatgccgtaactggagagactattcaccgtacatttagtggaaccggagcagatatggatattgtcatctccagtgtccgagcctatgttggtgcattgaataagatgatgagtttcagaaaactaatggcgaaaaataacaaacccgaaagcagtgcagtcgtataggtacttctgtgcaaatcaaggttatggaacttttgcaactgcactggagctttatcatttgtacaaaatgtaggagtctgttcaaagaatttgagcctgtagttttcaagaaaacaaagcttaatatgtctggtagtgcttgaaaatcatctaagtttatggtgtatcagttggaacattagacacattgtccatataactttgttcatgctcccgtttaactaatttatgaatctacataccacgcaagattttcgaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0167M06.1" temp_strand="-" temp_description="C06HBa0167M06.1  AC211057.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0167M06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="28797" stop="24649"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28497" g_stop="28430" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="68" r_length="68" r_score="0.985"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="28429" i_stop="27686" i_length="744">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.924" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="27685" g_stop="27602" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="69" r_stop="152" r_length="84" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="27601" i_stop="27504" i_length="98">
            <donor d_prob="0.957" d_score="1.00"/>
            <acceptor a_prob="0.667" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="27503" g_stop="27369" g_length="135"/>
          <reference_exon_boundary r_type="cDNA" r_start="153" r_stop="287" r_length="135" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="27368" i_stop="26067" i_length="1302">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="26066" g_stop="25921" g_length="146"/>
          <reference_exon_boundary r_type="cDNA" r_start="288" r_stop="433" r_length="146" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="25920" i_stop="25339" i_length="582">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.979" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="25338" g_stop="24964" g_length="375"/>
          <reference_exon_boundary r_type="cDNA" r_start="434" r_stop="808" r_length="375" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="821" polyA_stop="833"/>
      <MATCH_line gen_id="C06HBa0167M06.1" gen_strand="-" ref_id="SGN-E732107" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>808</cumulative_length_of_scored_exons>
        <coverage percentage="0.970" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0167M06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E732107" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28497" e_stop="28430"/>
          <exon e_start="27685" e_stop="27602"/>
          <exon e_start="27503" e_stop="27369"/>
          <exon e_start="26066" e_stop="25921"/>
          <exon e_start="25338" e_stop="24964"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACGAGATTGAGGGCAAAGAACTTGATGACCTGTTCTGGCGATTCAAATCTGTGGCTGAGAAGAAAAAGGTGAATTAAGATTTTGAAATTTCCACTGTTGTTTGGTATATTTACGTCATCATTCAAATGCATTTGGAGTGGTGGAGTTTAGTAAATTTGCTACATTGAAAATTCATGGAAGGGGATTGATGGCTGGAACATTTTCTCCTTTCTAGGTAACCTAGTGACTAGAACATGAGCTAAAAATATAGTTACGATCTCTCTCTCTCTCTCTCCCTTTTCACATTCAGTAAATCTTAAGTACGTCACATCTTCAAATTTTGTGAATTTTAGTGTCTTTATTCATCTATGTATCTGGGTTGTACATTAATTTTTGTGGAGTAGGAAACAACTGGTGTGTAAGAACTTCTAAGATATTGTGAAGTGAGATGAACTAAAGTATCAGAAAAGGTGGAAGTGAGAGTAGAAACAGATAAAGAAAATTGAGCATGAATGCGAATGGAAAGATTGGGCAGAGTTCAGGATACCTTCTGAACCAAGATAATCTGTCCTATTATTACTGGTATATTATAAAGTATAAACTACAGCTTTTCTCAAGGTGGGGAAACTGTCAAATTTGTGCTAAGACCCTTTAAACCTTCTTTTGGTTGTCAAAGTTTCCTCTGCTCATTTGAAAGGGTTATTTGGCTAATTATACTTTTATCAGTTAAATTATAATTAAAATTAAGGTTAAGAACTGTGTGGATCTCATATGATATTGGTATCGTGGACATATTTTTTGGCCATCTATTTATCTCCACGCTGCTATTTCAGAAAATTACAGATGATGACCTGGTAGCACTGATGTCAGATGAGGTTTTCCAGCCTCAATTTGTGTGGCAACTTCAAAATGTACAGGTAGATATTAATGTTGACTATATCTGCACTGTTTTAACTTTGATCTGGATTAAAAAGGATGGTTCAGCTGATTGAAAGACTTCCTGCTCTATGGACAGGTTACTTCTGGAAGTCTTGGCCTTTCTACAGCAACTGTTAAGCTCATTGATGCTGATGGTCGAGAGCATATTTCTTGTTCTGTTGGAACGGGGCCAGTTGACGCGGCTTATAAGGCAGTTGATCTCATTGTTAAGGTATGAAATAGAAATGAAACTCCTAATAATAAATAATCTTGTCACAGTGCTAGGACCCATGTTGATTGCAAGCCGATCAGTATGTTATATTCAACTATAAATGGTTAATTACAAACTCATTTGGTGAATCTCTTTTATGCAAATCGTATTCATAATTATACATATACTAATATTATTTTTCCCCAGGCTATAGATGCATCAAGTTTGAGTTCTGTTGAGCAAAATATTTGGAAGCTCGTGATTTTTGATATATTGTCTTGTTGTGTCCTCTTACCTGTACTTTTTCCTCCGTCATATGTACTACATATAAAGTTGTCTTAGGGTGCACCAAGGTATGGACTAATGGTAAAAGAAGTGGGTTTAGAACTATGAGGTCTCGGGTTCAAATTCCTCAGAGACAAAACAAATAGGTGATTTCTTCTCATCTGTCCTAGCCTTAGTGGACAGATTACCTCATACCTATCCCGTGGAATTAGTCGAGTTGTCTGAAAGCTGGTCCAGACACCACGGTTATCCAAAAATAAAAGTTACCTTAGGGTCAATTGTTCTTTTGTACAACAGTATTCTTGCTGTTGAAGAAGTCGGGTCAACCCAAGTATATGTTGTACTTAAAAACTAAGAGCCTGTTTGGATTCACTTGAAAGTTGGTCAAACCTACTTTTAAGTCATTTTTAGTTTTGGGGATTGTTTGACATGGTTAAAAATAAGTTTAAAATGACCCAATCCAAACGGGCTCTAAGACTACATAATAAACCTCATGTGGAGTCCTATTCTAAAGCTAGTCCAAACCTAACCCAGCATCTAGTGCTGTATTCAATGATGACATCAGCAGACAACCCAAATCCTACATAACAAATGCAATTTTGCTATAATGTGCTGGGAAGATATTGCCGAGAATCTATTGGAAATAACCTCTCAACCTTTACAAGGCAGGGGCAAGGCTACGTACACACCACCCTCCCCAGACCCCACTTGTTTACACTGGGTGTGTTGTTGTACTGCGAAGATATCTTTTAAGAGCAGTTTTATCATTTTCCATATAATTGATGGACCTACTAGCTTTATAATAACTTCCCAAAAATAATTAAAACTATATTTGATATGCATTTTGAGTAGGAATTTTTACATTTTGAATTTGACTTACAAGCAGTTTTCTATATATCTTGAGAGAACCCAACTTTTTTGTTCGAGAAGATGGTGTTTGCCTCTAAATCAGCAGTCAAACTTGTCTCTATTTAATAATCTCTTTGGTTTAATGTGTATTATGGTCTGGTAATTCTAGTGTTCATGCATTTTGTGCAGGTACCTGTAACACTCCTTGAGTATTCCATGAATGCAGTCACACAAGGTATAGATGCTATAGCTTCAACCAGAGTCTTAATTCGTGGAGAAAATGGCCATACATCAACCCATGCCGTAACTGGAGAGACTATTCACCGTACATTTAGGTATGAAATGTACCAGCCATGTTGTTTGCATTTATTCTTCTTTCGCTGATAGAACCTAGGGAACATGGAGAGAGAGGGAGGGGGGCATGTAGGTGTTGACACAGTAAATTTTAGAATTGGCGACATGACATCAATGAGCCAAATTTATATGTTTTCAATAAAGCATAACCACAGTAGTCACAAGATTCATGTTTACTCTCCCCTTCTCTTCACCATTCTTCTATAATGCAGCCTTCACCCAACAAAAGATCAACTTCCAGGCCTCTTGCTTATTTTCTCCATTGACTGCCCTCACCCTTTGTGTTTCCTCATCACTGCAACCCCTCACATGACTGCTCCCAACTGTTACTCTCGTGCCTCCAAGTTCTTTCTTCAATCTCCCATTTTTCCATTAGACTTGTCCAAAAGAAACACCAGTGTTAGTGTGTGTATCAAGTAGAAGAGTCAAAATCCGTAGTAGATATGCTTGGCTGGATGTCAATCATGTGTTCAACGTCACTTTTTTCTGGGGCAAGTCTGTGAAATATCACCTTTCATTTCTCTCATTAGAAAAGGCTTTTTATATCTTCTATCTTCTTCCAGTGGAACCGGAGCAGATATGGATATTGTCATCTCCAGTGTCCGAGCCTATGTTGGTGCATTGAATAAGATGATGAGTTTCAGAAAACTAATGGCGAAAAATAACAAACCCGAAAGCAGTGCAGTCGTATAGGTACTTCTGTGCAAATCAAGGTTATGGAACTTTTGCAACTGCACTGGAGCTTTATCATTTGTACAAAATGTAGGAGTCTGTTCAAAGAATTTGAGCCTGTAGTTTTCAAGAAAACAAAGCTTAATATGTCTGGTAGTGCTTGAAAATCATCTAAGTTTATGGTGTATCAGTTGGAACATTAGACACATTGTCCATATAACTTTGTTCATGCTCCCGTTTAACTAATTTATGAATCTACATACCAC</genome_strand>
        <mrna_strand>ACGTGATTGAGGGCAAAGAACTTGATGACCTGTTCTGGCGATTCAAATCTGTGGCTGAGAAGAAAAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAATTACAGATGATGACCTGGTAGCACTGATGTCAGATGAGGTTTTCCAGCCTCAATTTGTGTGGCAACTTCAAAATGTACAG..................................................................................................GTTACTTCTGGAAGTCTTGGCCTTTCTACAGCAACTGTTAAGCTCATTGATGCTGATGGTCGAGAGCATATTTCTTGTTCTGTTGGAACGGGGCCAGTTGACGCGGCTTATAAGGCAGTTGATCTCATTGTTAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACCTGTAACACTCCTTGAGTATTCCATGAATGCAGTCACACAAGGTATAGATGCTATAGCTTCAACCAGAGTCTTAATTCGTGGAGAAAATGGCCATACATCAACCCATGCCGTAACTGGAGAGACTATTCACCGTACATTTAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGAACCGGAGCAGATATGGATATTGTCATCTCCAGTGTCCGAGCCTATGTTGGTGCATTGAATAAGATGATGAGTTTCAGAAAACTAATGGCGAAAAATAACAAACCCGAAAGCAGTGCAGTCGTATAGGTACTTCTGTGCAAATCAAGGTTATGGAACTTTTGCAACTGCACTGGAGCTTTATCATTTGTACAAAATGTAGGAGTCTGTTCAAAGAATTTGAGCCTGTAGTTTTCAAGAAAACAAAGCTTAATATGTCTGGTAGTGCTTGAAAATCATCTAAGTTTATGGTGTATCAGTTGGAACATTAGACACATTGTCCATATAACTTTGTTCATGCTCCCGTTTAACTAATTTATGAATCTACATACCAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E404982" ref_strand="+" ref_description="SGN-E404982 [PPC-16-E15]">
      <seq>aggttcaccgtacatttagtggaactggagcagatatggatattgttatctccagtgtccgagcctatgttggtgcattgaataagatgatgagtttcagaaaactgttggcgaaaaacaacaaacccgaaggcagtgcagtcatataggtacttctctgcaaatcaaggttatggaacttatgcaactgcactggagctttatcatttgtacagaatggaggaggctgttcaaagaatttgaacctgtagttttcgagaaaacaaagcttaaatgcctggtagtgcttgaaaatcatctaagtttatggtgtatcagttaaaacattagacacattgtccatataagatgttttttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0167M06.1" temp_strand="-" temp_description="C06HBa0167M06.1  AC211057.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0167M06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="25654" stop="24698"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="25338" g_stop="24998" g_length="341"/>
          <reference_exon_boundary r_type="cDNA" r_start="20" r_stop="358" r_length="339" r_score="0.930"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0167M06.1" gen_strand="-" ref_id="SGN-E404982" ref_strand="+">
        <total_alignment_score>0.930</total_alignment_score>
        <cumulative_length_of_scored_exons>341</cumulative_length_of_scored_exons>
        <coverage percentage="0.953" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0167M06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E404982" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="25338" e_stop="24998"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGAACCGGAGCAGATATGGATATTGTCATCTCCAGTGTCCGAGCCTATGTTGGTGCATTGAATAAGATGATGAGTTTCAGAAAACTAATGGCGAAAAATAACAAACCCGAAAGCAGTGCAGTCGTATAGGTACTTCTGTGCAAATCAAGGTTATGGAACTTTTGCAACTGCACTGGAGCTTTATCATTTGTACAAAATGTAGGAGTCTGTTCAAAGAATTTGAGCCTGTAGTTTTCAAGAAAACAAAGCTTAATATGTCTGGTAGTGCTTGAAAATCATCTAAGTTTATGGTGTATCAGTTGGAACATTAGACACATTGTCCATATAACTTTGTTCATGC</genome_strand>
        <mrna_strand>TGGAACTGGAGCAGATATGGATATTGTTATCTCCAGTGTCCGAGCCTATGTTGGTGCATTGAATAAGATGATGAGTTTCAGAAAACTGTTGGCGAAAAACAACAAACCCGAAGGCAGTGCAGTCATATAGGTACTTCTCTGCAAATCAAGGTTATGGAACTTATGCAACTGCACTGGAGCTTTATCATTTGTACAGAATGGAGGAGGCTGTTCAAAGAATTTGAACCTGTAGTTTTCGAGAAAACAAAGCTTAA-ATGCCTGGTAGTGCTTGAAAATCATCTAAGTTTATGGTGTATCAGTTAAAACATTAGACACATTGTCCATATAA-GATGTTTTTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E435552" ref_strand="-" ref_description="SGN-E435552 [STM-61-B16]">
      <seq>tcatgctttgcaagctaaaatgcttgagcttggatacgaaattgagggaaaagaacttgatgacctcttctggcgattcaaatctgtggctgagaagaaaaagaaaattacagatgatgccctgatagcactgatgtcagatgaagttttccagcctcaatttgtttggcaacttcaaaatgtacaggttacttgtggaagtcttggcctttctacagcaaccgttaagctcattgatgctgatggtcaagagcatatttcttgttctgttggaacggggccagttgacgcggcttataaggcagttgatctcattgtcaaggtacctgtaacactccttgagtattccatgaatgcagtcacacaaggtatagatgctatagcttcaaccagagtcttaattcgtggggaaaatggccatacatcaacccatgccttaactggagagactgttcaccgtacatttagtggaaccggagcagatatggatattgttatctccagtgtccgagcctatgttggtgcattgaataagatgatgagtttcagaaaactgttggcgaaaaacaacaaacccgaaggcagtgcagtcatataggtgcttctctgcaaatcaaggttatggaacttatgcaactgcactggagctttatcatttgtacagaatggaggaggctgctcaaagaatttgaacctgtagttactcgaaaacaaagcttaaatgcctggtagtgcttgaaaatcatctaagtttatggtgtatcagataaaacattagacacattgtccatataagatgttttttcaggacttcaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0167M06.1" temp_strand="-" temp_description="C06HBa0167M06.1  AC211057.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0167M06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="28821" stop="24698"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28609" g_stop="28582" g_length="28"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="28" r_length="28" r_score="0.964"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="28581" i_stop="28505" i_length="77">
            <donor d_prob="0.989" d_score="0.00"/>
            <acceptor a_prob="0.668" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28504" g_stop="28430" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="29" r_stop="103" r_length="75" r_score="0.960"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="28429" i_stop="27686" i_length="744">
            <donor d_prob="0.985" d_score="0.98"/>
            <acceptor a_prob="0.924" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="27685" g_stop="27602" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="104" r_stop="187" r_length="84" r_score="0.952"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="27601" i_stop="27504" i_length="98">
            <donor d_prob="0.957" d_score="0.96"/>
            <acceptor a_prob="0.667" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="27503" g_stop="27369" g_length="135"/>
          <reference_exon_boundary r_type="cDNA" r_start="188" r_stop="322" r_length="135" r_score="0.970"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="27368" i_stop="26067" i_length="1302">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="26066" g_stop="25921" g_length="146"/>
          <reference_exon_boundary r_type="cDNA" r_start="323" r_stop="468" r_length="146" r_score="0.979"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="25920" i_stop="25339" i_length="582">
            <donor d_prob="0.994" d_score="0.96"/>
            <acceptor a_prob="0.979" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="25338" g_stop="25010" g_length="329"/>
          <reference_exon_boundary r_type="cDNA" r_start="469" r_stop="795" r_length="327" r_score="0.930"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="815" polyA_stop="833"/>
      <MATCH_line gen_id="C06HBa0167M06.1" gen_strand="-" ref_id="SGN-E435552" ref_strand="-">
        <total_alignment_score>0.952</total_alignment_score>
        <cumulative_length_of_scored_exons>797</cumulative_length_of_scored_exons>
        <coverage percentage="0.957" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0167M06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E435552" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="28609" e_stop="28582"/>
          <exon e_start="28504" e_stop="28430"/>
          <exon e_start="27685" e_stop="27602"/>
          <exon e_start="27503" e_stop="27369"/>
          <exon e_start="26066" e_stop="25921"/>
          <exon e_start="25338" e_stop="25010"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCATGCTTTGCAAGCCAAAATGCTTGAGGTAAATTGCATGCTCTGAGAATTTTGTTTATTTCTTAAATTTAAGAGCACGAGACAAATCGTTTTAGTCCTATGCAGCTTGGATACGAGATTGAGGGCAAAGAACTTGATGACCTGTTCTGGCGATTCAAATCTGTGGCTGAGAAGAAAAAGGTGAATTAAGATTTTGAAATTTCCACTGTTGTTTGGTATATTTACGTCATCATTCAAATGCATTTGGAGTGGTGGAGTTTAGTAAATTTGCTACATTGAAAATTCATGGAAGGGGATTGATGGCTGGAACATTTTCTCCTTTCTAGGTAACCTAGTGACTAGAACATGAGCTAAAAATATAGTTACGATCTCTCTCTCTCTCTCTCCCTTTTCACATTCAGTAAATCTTAAGTACGTCACATCTTCAAATTTTGTGAATTTTAGTGTCTTTATTCATCTATGTATCTGGGTTGTACATTAATTTTTGTGGAGTAGGAAACAACTGGTGTGTAAGAACTTCTAAGATATTGTGAAGTGAGATGAACTAAAGTATCAGAAAAGGTGGAAGTGAGAGTAGAAACAGATAAAGAAAATTGAGCATGAATGCGAATGGAAAGATTGGGCAGAGTTCAGGATACCTTCTGAACCAAGATAATCTGTCCTATTATTACTGGTATATTATAAAGTATAAACTACAGCTTTTCTCAAGGTGGGGAAACTGTCAAATTTGTGCTAAGACCCTTTAAACCTTCTTTTGGTTGTCAAAGTTTCCTCTGCTCATTTGAAAGGGTTATTTGGCTAATTATACTTTTATCAGTTAAATTATAATTAAAATTAAGGTTAAGAACTGTGTGGATCTCATATGATATTGGTATCGTGGACATATTTTTTGGCCATCTATTTATCTCCACGCTGCTATTTCAGAAAATTACAGATGATGACCTGGTAGCACTGATGTCAGATGAGGTTTTCCAGCCTCAATTTGTGTGGCAACTTCAAAATGTACAGGTAGATATTAATGTTGACTATATCTGCACTGTTTTAACTTTGATCTGGATTAAAAAGGATGGTTCAGCTGATTGAAAGACTTCCTGCTCTATGGACAGGTTACTTCTGGAAGTCTTGGCCTTTCTACAGCAACTGTTAAGCTCATTGATGCTGATGGTCGAGAGCATATTTCTTGTTCTGTTGGAACGGGGCCAGTTGACGCGGCTTATAAGGCAGTTGATCTCATTGTTAAGGTATGAAATAGAAATGAAACTCCTAATAATAAATAATCTTGTCACAGTGCTAGGACCCATGTTGATTGCAAGCCGATCAGTATGTTATATTCAACTATAAATGGTTAATTACAAACTCATTTGGTGAATCTCTTTTATGCAAATCGTATTCATAATTATACATATACTAATATTATTTTTCCCCAGGCTATAGATGCATCAAGTTTGAGTTCTGTTGAGCAAAATATTTGGAAGCTCGTGATTTTTGATATATTGTCTTGTTGTGTCCTCTTACCTGTACTTTTTCCTCCGTCATATGTACTACATATAAAGTTGTCTTAGGGTGCACCAAGGTATGGACTAATGGTAAAAGAAGTGGGTTTAGAACTATGAGGTCTCGGGTTCAAATTCCTCAGAGACAAAACAAATAGGTGATTTCTTCTCATCTGTCCTAGCCTTAGTGGACAGATTACCTCATACCTATCCCGTGGAATTAGTCGAGTTGTCTGAAAGCTGGTCCAGACACCACGGTTATCCAAAAATAAAAGTTACCTTAGGGTCAATTGTTCTTTTGTACAACAGTATTCTTGCTGTTGAAGAAGTCGGGTCAACCCAAGTATATGTTGTACTTAAAAACTAAGAGCCTGTTTGGATTCACTTGAAAGTTGGTCAAACCTACTTTTAAGTCATTTTTAGTTTTGGGGATTGTTTGACATGGTTAAAAATAAGTTTAAAATGACCCAATCCAAACGGGCTCTAAGACTACATAATAAACCTCATGTGGAGTCCTATTCTAAAGCTAGTCCAAACCTAACCCAGCATCTAGTGCTGTATTCAATGATGACATCAGCAGACAACCCAAATCCTACATAACAAATGCAATTTTGCTATAATGTGCTGGGAAGATATTGCCGAGAATCTATTGGAAATAACCTCTCAACCTTTACAAGGCAGGGGCAAGGCTACGTACACACCACCCTCCCCAGACCCCACTTGTTTACACTGGGTGTGTTGTTGTACTGCGAAGATATCTTTTAAGAGCAGTTTTATCATTTTCCATATAATTGATGGACCTACTAGCTTTATAATAACTTCCCAAAAATAATTAAAACTATATTTGATATGCATTTTGAGTAGGAATTTTTACATTTTGAATTTGACTTACAAGCAGTTTTCTATATATCTTGAGAGAACCCAACTTTTTTGTTCGAGAAGATGGTGTTTGCCTCTAAATCAGCAGTCAAACTTGTCTCTATTTAATAATCTCTTTGGTTTAATGTGTATTATGGTCTGGTAATTCTAGTGTTCATGCATTTTGTGCAGGTACCTGTAACACTCCTTGAGTATTCCATGAATGCAGTCACACAAGGTATAGATGCTATAGCTTCAACCAGAGTCTTAATTCGTGGAGAAAATGGCCATACATCAACCCATGCCGTAACTGGAGAGACTATTCACCGTACATTTAGGTATGAAATGTACCAGCCATGTTGTTTGCATTTATTCTTCTTTCGCTGATAGAACCTAGGGAACATGGAGAGAGAGGGAGGGGGGCATGTAGGTGTTGACACAGTAAATTTTAGAATTGGCGACATGACATCAATGAGCCAAATTTATATGTTTTCAATAAAGCATAACCACAGTAGTCACAAGATTCATGTTTACTCTCCCCTTCTCTTCACCATTCTTCTATAATGCAGCCTTCACCCAACAAAAGATCAACTTCCAGGCCTCTTGCTTATTTTCTCCATTGACTGCCCTCACCCTTTGTGTTTCCTCATCACTGCAACCCCTCACATGACTGCTCCCAACTGTTACTCTCGTGCCTCCAAGTTCTTTCTTCAATCTCCCATTTTTCCATTAGACTTGTCCAAAAGAAACACCAGTGTTAGTGTGTGTATCAAGTAGAAGAGTCAAAATCCGTAGTAGATATGCTTGGCTGGATGTCAATCATGTGTTCAACGTCACTTTTTTCTGGGGCAAGTCTGTGAAATATCACCTTTCATTTCTCTCATTAGAAAAGGCTTTTTATATCTTCTATCTTCTTCCAGTGGAACCGGAGCAGATATGGATATTGTCATCTCCAGTGTCCGAGCCTATGTTGGTGCATTGAATAAGATGATGAGTTTCAGAAAACTAATGGCGAAAAATAACAAACCCGAAAGCAGTGCAGTCGTATAGGTACTTCTGTGCAAATCAAGGTTATGGAACTTTTGCAACTGCACTGGAGCTTTATCATTTGTACAAAATGTAGGAGTCTGTTCAAAGAATTTGAGCCTGTAGTTTTCAAGAAAACAAAGCTTAATATGTCTGGTAGTGCTTGAAAATCATCTAAGTTTATGGTGTATCAGTTGGAACATTAGACACATTGTCCATATAA</genome_strand>
        <mrna_strand>TCATGCTTTGCAAGCTAAAATGCTTGAG.............................................................................CTTGGATACGAAATTGAGGGAAAAGAACTTGATGACCTCTTCTGGCGATTCAAATCTGTGGCTGAGAAGAAAAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAATTACAGATGATGCCCTGATAGCACTGATGTCAGATGAAGTTTTCCAGCCTCAATTTGTTTGGCAACTTCAAAATGTACAG..................................................................................................GTTACTTGTGGAAGTCTTGGCCTTTCTACAGCAACCGTTAAGCTCATTGATGCTGATGGTCAAGAGCATATTTCTTGTTCTGTTGGAACGGGGCCAGTTGACGCGGCTTATAAGGCAGTTGATCTCATTGTCAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACCTGTAACACTCCTTGAGTATTCCATGAATGCAGTCACACAAGGTATAGATGCTATAGCTTCAACCAGAGTCTTAATTCGTGGGGAAAATGGCCATACATCAACCCATGCCTTAACTGGAGAGACTGTTCACCGTACATTTAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGAACCGGAGCAGATATGGATATTGTTATCTCCAGTGTCCGAGCCTATGTTGGTGCATTGAATAAGATGATGAGTTTCAGAAAACTGTTGGCGAAAAACAACAAACCCGAAGGCAGTGCAGTCATATAGGTGCTTCTCTGCAAATCAAGGTTATGGAACTTATGCAACTGCACTGGAGCTTTATCATTTGTACAGAATGGAGGAGGCTGCTCAAAGAATTTGAACCTGTAG-TTACTCGAAAACAAAGCTTAA-ATGCCTGGTAGTGCTTGAAAATCATCTAAGTTTATGGTGTATCAGATAAAACATTAGACACATTGTCCATATAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E616271" ref_strand="-" ref_description="SGN-E616271 [66079]">
      <seq>agatgatgaccttgatagcactgatgtcagatgaagttttccagcctcaatttgtttggcaacttcaaaatgtacaggttacttgtggaagtcttggtctttctacagcaaccgttaagctcattgatgctgatggtcaagagcatatttcttgttctgttggaacggggccagttgacgcggcttataaggcagttgatctcattgtcaaggtacctgtaacactccttgagtattccatgaatgcagtcacacaaggtatagatgctatagcttcaaccagagtcttaattcgtggagaaaatggccatacatcaacccatgccttaactggagagactgttcaccgtacatttagtggaaccggagcagatatggatattgttatctccagtgtccgagcctatgttggtgcattgaataagatgatgagtttcagaaaactgttggcgaaaaacaacaaacccgaaggcagtgcagtgatataggtacttctctgcaaatcaaggttatggaacttatgcaactgcactggagctttatcatttgtacagaatggaggaggctgttcaaagaatttgaacctgtagttactcgaaaacaaagcttaaatgcctggtagtgcttgaaaatcatctaagtttatggtgtatcagttaaaacattagacacattgtccatataagatgttttttcaggacttcaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0167M06.1" temp_strand="-" temp_description="C06HBa0167M06.1  AC211057.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0167M06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="27977" stop="24698"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="27677" g_stop="27602" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="77" r_length="77" r_score="0.934"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="27601" i_stop="27504" i_length="98">
            <donor d_prob="0.957" d_score="0.96"/>
            <acceptor a_prob="0.667" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="27503" g_stop="27369" g_length="135"/>
          <reference_exon_boundary r_type="cDNA" r_start="78" r_stop="212" r_length="135" r_score="0.963"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="27368" i_stop="26067" i_length="1302">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="26066" g_stop="25921" g_length="146"/>
          <reference_exon_boundary r_type="cDNA" r_start="213" r_stop="358" r_length="146" r_score="0.986"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="25920" i_stop="25339" i_length="582">
            <donor d_prob="0.994" d_score="0.96"/>
            <acceptor a_prob="0.979" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="25338" g_stop="25010" g_length="329"/>
          <reference_exon_boundary r_type="cDNA" r_start="359" r_stop="685" r_length="327" r_score="0.936"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="705" polyA_stop="722"/>
      <MATCH_line gen_id="C06HBa0167M06.1" gen_strand="-" ref_id="SGN-E616271" ref_strand="-">
        <total_alignment_score>0.952</total_alignment_score>
        <cumulative_length_of_scored_exons>686</cumulative_length_of_scored_exons>
        <coverage percentage="0.950" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0167M06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E616271" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="27677" e_stop="27602"/>
          <exon e_start="27503" e_stop="27369"/>
          <exon e_start="26066" e_stop="25921"/>
          <exon e_start="25338" e_stop="25010"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGATGATGACCTGG-TAGCACTGATGTCAGATGAGGTTTTCCAGCCTCAATTTGTGTGGCAACTTCAAAATGTACAGGTAGATATTAATGTTGACTATATCTGCACTGTTTTAACTTTGATCTGGATTAAAAAGGATGGTTCAGCTGATTGAAAGACTTCCTGCTCTATGGACAGGTTACTTCTGGAAGTCTTGGCCTTTCTACAGCAACTGTTAAGCTCATTGATGCTGATGGTCGAGAGCATATTTCTTGTTCTGTTGGAACGGGGCCAGTTGACGCGGCTTATAAGGCAGTTGATCTCATTGTTAAGGTATGAAATAGAAATGAAACTCCTAATAATAAATAATCTTGTCACAGTGCTAGGACCCATGTTGATTGCAAGCCGATCAGTATGTTATATTCAACTATAAATGGTTAATTACAAACTCATTTGGTGAATCTCTTTTATGCAAATCGTATTCATAATTATACATATACTAATATTATTTTTCCCCAGGCTATAGATGCATCAAGTTTGAGTTCTGTTGAGCAAAATATTTGGAAGCTCGTGATTTTTGATATATTGTCTTGTTGTGTCCTCTTACCTGTACTTTTTCCTCCGTCATATGTACTACATATAAAGTTGTCTTAGGGTGCACCAAGGTATGGACTAATGGTAAAAGAAGTGGGTTTAGAACTATGAGGTCTCGGGTTCAAATTCCTCAGAGACAAAACAAATAGGTGATTTCTTCTCATCTGTCCTAGCCTTAGTGGACAGATTACCTCATACCTATCCCGTGGAATTAGTCGAGTTGTCTGAAAGCTGGTCCAGACACCACGGTTATCCAAAAATAAAAGTTACCTTAGGGTCAATTGTTCTTTTGTACAACAGTATTCTTGCTGTTGAAGAAGTCGGGTCAACCCAAGTATATGTTGTACTTAAAAACTAAGAGCCTGTTTGGATTCACTTGAAAGTTGGTCAAACCTACTTTTAAGTCATTTTTAGTTTTGGGGATTGTTTGACATGGTTAAAAATAAGTTTAAAATGACCCAATCCAAACGGGCTCTAAGACTACATAATAAACCTCATGTGGAGTCCTATTCTAAAGCTAGTCCAAACCTAACCCAGCATCTAGTGCTGTATTCAATGATGACATCAGCAGACAACCCAAATCCTACATAACAAATGCAATTTTGCTATAATGTGCTGGGAAGATATTGCCGAGAATCTATTGGAAATAACCTCTCAACCTTTACAAGGCAGGGGCAAGGCTACGTACACACCACCCTCCCCAGACCCCACTTGTTTACACTGGGTGTGTTGTTGTACTGCGAAGATATCTTTTAAGAGCAGTTTTATCATTTTCCATATAATTGATGGACCTACTAGCTTTATAATAACTTCCCAAAAATAATTAAAACTATATTTGATATGCATTTTGAGTAGGAATTTTTACATTTTGAATTTGACTTACAAGCAGTTTTCTATATATCTTGAGAGAACCCAACTTTTTTGTTCGAGAAGATGGTGTTTGCCTCTAAATCAGCAGTCAAACTTGTCTCTATTTAATAATCTCTTTGGTTTAATGTGTATTATGGTCTGGTAATTCTAGTGTTCATGCATTTTGTGCAGGTACCTGTAACACTCCTTGAGTATTCCATGAATGCAGTCACACAAGGTATAGATGCTATAGCTTCAACCAGAGTCTTAATTCGTGGAGAAAATGGCCATACATCAACCCATGCCGTAACTGGAGAGACTATTCACCGTACATTTAGGTATGAAATGTACCAGCCATGTTGTTTGCATTTATTCTTCTTTCGCTGATAGAACCTAGGGAACATGGAGAGAGAGGGAGGGGGGCATGTAGGTGTTGACACAGTAAATTTTAGAATTGGCGACATGACATCAATGAGCCAAATTTATATGTTTTCAATAAAGCATAACCACAGTAGTCACAAGATTCATGTTTACTCTCCCCTTCTCTTCACCATTCTTCTATAATGCAGCCTTCACCCAACAAAAGATCAACTTCCAGGCCTCTTGCTTATTTTCTCCATTGACTGCCCTCACCCTTTGTGTTTCCTCATCACTGCAACCCCTCACATGACTGCTCCCAACTGTTACTCTCGTGCCTCCAAGTTCTTTCTTCAATCTCCCATTTTTCCATTAGACTTGTCCAAAAGAAACACCAGTGTTAGTGTGTGTATCAAGTAGAAGAGTCAAAATCCGTAGTAGATATGCTTGGCTGGATGTCAATCATGTGTTCAACGTCACTTTTTTCTGGGGCAAGTCTGTGAAATATCACCTTTCATTTCTCTCATTAGAAAAGGCTTTTTATATCTTCTATCTTCTTCCAGTGGAACCGGAGCAGATATGGATATTGTCATCTCCAGTGTCCGAGCCTATGTTGGTGCATTGAATAAGATGATGAGTTTCAGAAAACTAATGGCGAAAAATAACAAACCCGAAAGCAGTGCAGTCGTATAGGTACTTCTGTGCAAATCAAGGTTATGGAACTTTTGCAACTGCACTGGAGCTTTATCATTTGTACAAAATGTAGGAGTCTGTTCAAAGAATTTGAGCCTGTAGTTTTCAAGAAAACAAAGCTTAATATGTCTGGTAGTGCTTGAAAATCATCTAAGTTTATGGTGTATCAGTTGGAACATTAGACACATTGTCCATATAA</genome_strand>
        <mrna_strand>AGATGATGACCTTGATAGCACTGATGTCAGATGAAGTTTTCCAGCCTCAATTTGTTTGGCAACTTCAAAATGTACAG..................................................................................................GTTACTTGTGGAAGTCTTGGTCTTTCTACAGCAACCGTTAAGCTCATTGATGCTGATGGTCAAGAGCATATTTCTTGTTCTGTTGGAACGGGGCCAGTTGACGCGGCTTATAAGGCAGTTGATCTCATTGTCAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACCTGTAACACTCCTTGAGTATTCCATGAATGCAGTCACACAAGGTATAGATGCTATAGCTTCAACCAGAGTCTTAATTCGTGGAGAAAATGGCCATACATCAACCCATGCCTTAACTGGAGAGACTGTTCACCGTACATTTAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGAACCGGAGCAGATATGGATATTGTTATCTCCAGTGTCCGAGCCTATGTTGGTGCATTGAATAAGATGATGAGTTTCAGAAAACTGTTGGCGAAAAACAACAAACCCGAAGGCAGTGCAGTGATATAGGTACTTCTCTGCAAATCAAGGTTATGGAACTTATGCAACTGCACTGGAGCTTTATCATTTGTACAGAATGGAGGAGGCTGTTCAAAGAATTTGAACCTGTAG-TTACTCGAAAACAAAGCTTAA-ATGCCTGGTAGTGCTTGAAAATCATCTAAGTTTATGGTGTATCAGTTAAAACATTAGACACATTGTCCATATAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E407545" ref_strand="+" ref_description="SGN-E407545 [PPI-7-P11]">
      <seq>cttaattcgtggagaaaatggccatacatcaacccatgccttaactggagagactgttcaccgtacatttagtggaaccggagcagatatggatattgttatctccagtgtccgagcctatgttggtgcattgaataagatgatgagtttcagaaaactgttggcgaaaaataacaaacccgaaggcagtgcagtgatataggtacttctgtgttgatcaaggttatggaacttatgcaactgcactggagctttatcatttgtacagaatggaggaggctgtttaaagaatttgaacctgtagttactcgaaaacaaagcttaaatgcctggtagtgcttgaaaatcatctaagtttatggtgtatcagttaaaacagtagacacattgtccatataagatgttttttcaggacttcaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0167M06.1" temp_strand="-" temp_description="C06HBa0167M06.1  AC211057.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0167M06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="26292" stop="24698"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="25992" g_stop="25921" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="72" r_length="72" r_score="0.972"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="25920" i_stop="25339" i_length="582">
            <donor d_prob="0.994" d_score="0.96"/>
            <acceptor a_prob="0.979" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="25338" g_stop="25010" g_length="329"/>
          <reference_exon_boundary r_type="cDNA" r_start="73" r_stop="399" r_length="327" r_score="0.927"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="419" polyA_stop="430"/>
      <MATCH_line gen_id="C06HBa0167M06.1" gen_strand="-" ref_id="SGN-E407545" ref_strand="+">
        <total_alignment_score>0.935</total_alignment_score>
        <cumulative_length_of_scored_exons>401</cumulative_length_of_scored_exons>
        <coverage percentage="0.933" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0167M06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E407545" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="25992" e_stop="25921"/>
          <exon e_start="25338" e_stop="25010"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTAATTCGTGGAGAAAATGGCCATACATCAACCCATGCCGTAACTGGAGAGACTATTCACCGTACATTTAGGTATGAAATGTACCAGCCATGTTGTTTGCATTTATTCTTCTTTCGCTGATAGAACCTAGGGAACATGGAGAGAGAGGGAGGGGGGCATGTAGGTGTTGACACAGTAAATTTTAGAATTGGCGACATGACATCAATGAGCCAAATTTATATGTTTTCAATAAAGCATAACCACAGTAGTCACAAGATTCATGTTTACTCTCCCCTTCTCTTCACCATTCTTCTATAATGCAGCCTTCACCCAACAAAAGATCAACTTCCAGGCCTCTTGCTTATTTTCTCCATTGACTGCCCTCACCCTTTGTGTTTCCTCATCACTGCAACCCCTCACATGACTGCTCCCAACTGTTACTCTCGTGCCTCCAAGTTCTTTCTTCAATCTCCCATTTTTCCATTAGACTTGTCCAAAAGAAACACCAGTGTTAGTGTGTGTATCAAGTAGAAGAGTCAAAATCCGTAGTAGATATGCTTGGCTGGATGTCAATCATGTGTTCAACGTCACTTTTTTCTGGGGCAAGTCTGTGAAATATCACCTTTCATTTCTCTCATTAGAAAAGGCTTTTTATATCTTCTATCTTCTTCCAGTGGAACCGGAGCAGATATGGATATTGTCATCTCCAGTGTCCGAGCCTATGTTGGTGCATTGAATAAGATGATGAGTTTCAGAAAACTAATGGCGAAAAATAACAAACCCGAAAGCAGTGCAGTCGTATAGGTACTTCTGTGCAAATCAAGGTTATGGAACTTTTGCAACTGCACTGGAGCTTTATCATTTGTACAAAATGTAGGAGTCTGTTCAAAGAATTTGAGCCTGTAGTTTTCAAGAAAACAAAGCTTAATATGTCTGGTAGTGCTTGAAAATCATCTAAGTTTATGGTGTATCAGTTGGAACATTAGACACATTGTCCATATAA</genome_strand>
        <mrna_strand>CTTAATTCGTGGAGAAAATGGCCATACATCAACCCATGCCTTAACTGGAGAGACTGTTCACCGTACATTTAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGAACCGGAGCAGATATGGATATTGTTATCTCCAGTGTCCGAGCCTATGTTGGTGCATTGAATAAGATGATGAGTTTCAGAAAACTGTTGGCGAAAAATAACAAACCCGAAGGCAGTGCAGTGATATAGGTACTTCTGTGTTGATCAAGGTTATGGAACTTATGCAACTGCACTGGAGCTTTATCATTTGTACAGAATGGAGGAGGCTGTTTAAAGAATTTGAACCTGTAG-TTACTCGAAAACAAAGCTTAA-ATGCCTGGTAGTGCTTGAAAATCATCTAAGTTTATGGTGTATCAGTTAAAACAGTAGACACATTGTCCATATAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E405874" ref_strand="+" ref_description="SGN-E405874 [PPI-1-L2]">
      <seq>catgaaagtggcatccatcagtgggcgtcatgctttgcaagctaaaatgcttgagcttggatacgaaattgagggaaaagaacttgatgacctcttctggcgattcaaatctgtggctgagaagaaaaagaaaattacagatgatgacctgatagcactgatgtcagatgaagttttccagcctcaatttgtttggcaacttcaaaatgtacaggttacttgtggaagtcttggcctttctacagcaaccgttaagctcattgatgctgatggtcaagagcatatttcttgttctgttggaacggggccagttgacgcggcttataaggcagttgatctcattgtcaaggtacctgtaacactccttgagtattccatgaatgcagtcacacaaggtatagatgctatagcttcaaccagagtcttaattcgtggggaaaatggccatacatcaacccatgccttaactggagagactgttcaccgtacatttagtggaaccggagcagatatggatattgttatctncagtgtccgagcctatgttggtgcattgaataagatgatgagtttcagaaaactgttggcgaaaaacaacaacccg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0167M06.1" temp_strand="-" temp_description="C06HBa0167M06.1  AC211057.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0167M06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="32286" stop="24929"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28749" g_stop="28729" g_length="21"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="21" r_length="21" r_score="0.571"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="28728" i_stop="28616" i_length="113">
            <donor d_prob="0.859" d_score="0.00"/>
            <acceptor a_prob="0.984" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28615" g_stop="28582" g_length="34"/>
          <reference_exon_boundary r_type="cDNA" r_start="22" r_stop="55" r_length="34" r_score="0.971"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="28581" i_stop="28505" i_length="77">
            <donor d_prob="0.989" d_score="0.00"/>
            <acceptor a_prob="0.668" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="28504" g_stop="28430" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="56" r_stop="130" r_length="75" r_score="0.960"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="28429" i_stop="27686" i_length="744">
            <donor d_prob="0.985" d_score="0.98"/>
            <acceptor a_prob="0.924" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="27685" g_stop="27602" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="131" r_stop="214" r_length="84" r_score="0.964"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="27601" i_stop="27504" i_length="98">
            <donor d_prob="0.957" d_score="0.96"/>
            <acceptor a_prob="0.667" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="27503" g_stop="27369" g_length="135"/>
          <reference_exon_boundary r_type="cDNA" r_start="215" r_stop="349" r_length="135" r_score="0.970"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="27368" i_stop="26067" i_length="1302">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="26066" g_stop="25921" g_length="146"/>
          <reference_exon_boundary r_type="cDNA" r_start="350" r_stop="495" r_length="146" r_score="0.979"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="25920" i_stop="25339" i_length="582">
            <donor d_prob="0.994" d_score="0.96"/>
            <acceptor a_prob="0.979" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="25338" g_stop="25229" g_length="110"/>
          <reference_exon_boundary r_type="cDNA" r_start="496" r_stop="604" r_length="109" r_score="0.945"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0167M06.1" gen_strand="-" ref_id="SGN-E405874" ref_strand="+">
        <total_alignment_score>0.965</total_alignment_score>
        <cumulative_length_of_scored_exons>605</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0167M06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E405874" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28749" e_stop="28729"/>
          <exon e_start="28615" e_stop="28582"/>
          <exon e_start="28504" e_stop="28430"/>
          <exon e_start="27685" e_stop="27602"/>
          <exon e_start="27503" e_stop="27369"/>
          <exon e_start="26066" e_stop="25921"/>
          <exon e_start="25338" e_stop="25229"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATGAAATAATTAT-CATCACAGTCTGTAACTTAATCCCTCTCGTGCCCTCCTTCCTAACCTGCTCTATTCATTATTTACATTGAATTACATCATGTCTTCAAGGAAATTGATACGTTGAACATTTTTTTTGTAGTGGGCGTCATGCTTTGCAAGCCAAAATGCTTGAGGTAAATTGCATGCTCTGAGAATTTTGTTTATTTCTTAAATTTAAGAGCACGAGACAAATCGTTTTAGTCCTATGCAGCTTGGATACGAGATTGAGGGCAAAGAACTTGATGACCTGTTCTGGCGATTCAAATCTGTGGCTGAGAAGAAAAAGGTGAATTAAGATTTTGAAATTTCCACTGTTGTTTGGTATATTTACGTCATCATTCAAATGCATTTGGAGTGGTGGAGTTTAGTAAATTTGCTACATTGAAAATTCATGGAAGGGGATTGATGGCTGGAACATTTTCTCCTTTCTAGGTAACCTAGTGACTAGAACATGAGCTAAAAATATAGTTACGATCTCTCTCTCTCTCTCTCCCTTTTCACATTCAGTAAATCTTAAGTACGTCACATCTTCAAATTTTGTGAATTTTAGTGTCTTTATTCATCTATGTATCTGGGTTGTACATTAATTTTTGTGGAGTAGGAAACAACTGGTGTGTAAGAACTTCTAAGATATTGTGAAGTGAGATGAACTAAAGTATCAGAAAAGGTGGAAGTGAGAGTAGAAACAGATAAAGAAAATTGAGCATGAATGCGAATGGAAAGATTGGGCAGAGTTCAGGATACCTTCTGAACCAAGATAATCTGTCCTATTATTACTGGTATATTATAAAGTATAAACTACAGCTTTTCTCAAGGTGGGGAAACTGTCAAATTTGTGCTAAGACCCTTTAAACCTTCTTTTGGTTGTCAAAGTTTCCTCTGCTCATTTGAAAGGGTTATTTGGCTAATTATACTTTTATCAGTTAAATTATAATTAAAATTAAGGTTAAGAACTGTGTGGATCTCATATGATATTGGTATCGTGGACATATTTTTTGGCCATCTATTTATCTCCACGCTGCTATTTCAGAAAATTACAGATGATGACCTGGTAGCACTGATGTCAGATGAGGTTTTCCAGCCTCAATTTGTGTGGCAACTTCAAAATGTACAGGTAGATATTAATGTTGACTATATCTGCACTGTTTTAACTTTGATCTGGATTAAAAAGGATGGTTCAGCTGATTGAAAGACTTCCTGCTCTATGGACAGGTTACTTCTGGAAGTCTTGGCCTTTCTACAGCAACTGTTAAGCTCATTGATGCTGATGGTCGAGAGCATATTTCTTGTTCTGTTGGAACGGGGCCAGTTGACGCGGCTTATAAGGCAGTTGATCTCATTGTTAAGGTATGAAATAGAAATGAAACTCCTAATAATAAATAATCTTGTCACAGTGCTAGGACCCATGTTGATTGCAAGCCGATCAGTATGTTATATTCAACTATAAATGGTTAATTACAAACTCATTTGGTGAATCTCTTTTATGCAAATCGTATTCATAATTATACATATACTAATATTATTTTTCCCCAGGCTATAGATGCATCAAGTTTGAGTTCTGTTGAGCAAAATATTTGGAAGCTCGTGATTTTTGATATATTGTCTTGTTGTGTCCTCTTACCTGTACTTTTTCCTCCGTCATATGTACTACATATAAAGTTGTCTTAGGGTGCACCAAGGTATGGACTAATGGTAAAAGAAGTGGGTTTAGAACTATGAGGTCTCGGGTTCAAATTCCTCAGAGACAAAACAAATAGGTGATTTCTTCTCATCTGTCCTAGCCTTAGTGGACAGATTACCTCATACCTATCCCGTGGAATTAGTCGAGTTGTCTGAAAGCTGGTCCAGACACCACGGTTATCCAAAAATAAAAGTTACCTTAGGGTCAATTGTTCTTTTGTACAACAGTATTCTTGCTGTTGAAGAAGTCGGGTCAACCCAAGTATATGTTGTACTTAAAAACTAAGAGCCTGTTTGGATTCACTTGAAAGTTGGTCAAACCTACTTTTAAGTCATTTTTAGTTTTGGGGATTGTTTGACATGGTTAAAAATAAGTTTAAAATGACCCAATCCAAACGGGCTCTAAGACTACATAATAAACCTCATGTGGAGTCCTATTCTAAAGCTAGTCCAAACCTAACCCAGCATCTAGTGCTGTATTCAATGATGACATCAGCAGACAACCCAAATCCTACATAACAAATGCAATTTTGCTATAATGTGCTGGGAAGATATTGCCGAGAATCTATTGGAAATAACCTCTCAACCTTTACAAGGCAGGGGCAAGGCTACGTACACACCACCCTCCCCAGACCCCACTTGTTTACACTGGGTGTGTTGTTGTACTGCGAAGATATCTTTTAAGAGCAGTTTTATCATTTTCCATATAATTGATGGACCTACTAGCTTTATAATAACTTCCCAAAAATAATTAAAACTATATTTGATATGCATTTTGAGTAGGAATTTTTACATTTTGAATTTGACTTACAAGCAGTTTTCTATATATCTTGAGAGAACCCAACTTTTTTGTTCGAGAAGATGGTGTTTGCCTCTAAATCAGCAGTCAAACTTGTCTCTATTTAATAATCTCTTTGGTTTAATGTGTATTATGGTCTGGTAATTCTAGTGTTCATGCATTTTGTGCAGGTACCTGTAACACTCCTTGAGTATTCCATGAATGCAGTCACACAAGGTATAGATGCTATAGCTTCAACCAGAGTCTTAATTCGTGGAGAAAATGGCCATACATCAACCCATGCCGTAACTGGAGAGACTATTCACCGTACATTTAGGTATGAAATGTACCAGCCATGTTGTTTGCATTTATTCTTCTTTCGCTGATAGAACCTAGGGAACATGGAGAGAGAGGGAGGGGGGCATGTAGGTGTTGACACAGTAAATTTTAGAATTGGCGACATGACATCAATGAGCCAAATTTATATGTTTTCAATAAAGCATAACCACAGTAGTCACAAGATTCATGTTTACTCTCCCCTTCTCTTCACCATTCTTCTATAATGCAGCCTTCACCCAACAAAAGATCAACTTCCAGGCCTCTTGCTTATTTTCTCCATTGACTGCCCTCACCCTTTGTGTTTCCTCATCACTGCAACCCCTCACATGACTGCTCCCAACTGTTACTCTCGTGCCTCCAAGTTCTTTCTTCAATCTCCCATTTTTCCATTAGACTTGTCCAAAAGAAACACCAGTGTTAGTGTGTGTATCAAGTAGAAGAGTCAAAATCCGTAGTAGATATGCTTGGCTGGATGTCAATCATGTGTTCAACGTCACTTTTTTCTGGGGCAAGTCTGTGAAATATCACCTTTCATTTCTCTCATTAGAAAAGGCTTTTTATATCTTCTATCTTCTTCCAGTGGAACCGGAGCAGATATGGATATTGTCATCTCCAGTGTCCGAGCCTATGTTGGTGCATTGAATAAGATGATGAGTTTCAGAAAACTAATGGCGAAAAATAACAAACCCG</genome_strand>
        <mrna_strand>CATGAAAGTGGCATCCATCA-G.................................................................................................................TGGGCGTCATGCTTTGCAAGCTAAAATGCTTGAG.............................................................................CTTGGATACGAAATTGAGGGAAAAGAACTTGATGACCTCTTCTGGCGATTCAAATCTGTGGCTGAGAAGAAAAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAATTACAGATGATGACCTGATAGCACTGATGTCAGATGAAGTTTTCCAGCCTCAATTTGTTTGGCAACTTCAAAATGTACAG..................................................................................................GTTACTTGTGGAAGTCTTGGCCTTTCTACAGCAACCGTTAAGCTCATTGATGCTGATGGTCAAGAGCATATTTCTTGTTCTGTTGGAACGGGGCCAGTTGACGCGGCTTATAAGGCAGTTGATCTCATTGTCAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACCTGTAACACTCCTTGAGTATTCCATGAATGCAGTCACACAAGGTATAGATGCTATAGCTTCAACCAGAGTCTTAATTCGTGGGGAAAATGGCCATACATCAACCCATGCCTTAACTGGAGAGACTGTTCACCGTACATTTAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGAACCGGAGCAGATATGGATATTGTTATCTNCAGTGTCCGAGCCTATGTTGGTGCATTGAATAAGATGATGAGTTTCAGAAAACTGTTGGCGAAAAACAAC-AACCCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E689371" ref_strand="+" ref_description="SGN-E689371 [t3_tus_84_G09]">
      <seq>atggaattggtgaaagagctggaaatgcttctttagaggaggttgtaatggccttaaagtgtcgtggagagcaagtactaggtggcctatatacagggattaatacacaacatatactcatgtcaagcaagatggtagaggagtattccggacttcatgtgcagccacacaaagccattgttggagctaatgcctttgctcatgaaagtggcatccatcaggatggaatgttaaaacacaaagatacatatgagattatatctcctgaagatattgggcttaatcgtgctaatgaatctggtattgtccttgggaaactcagtgggcgtcatgctttgcaagccaaaatgcttgagcttggatacgagattgagggcaaagaacttgatgacctgttctggcgattcaaatctgtggctgagaagaaaaagaaaattacagatgatgacctggtagcactgatgtcagatgaggttttccagcctcaatttgtgtggcaacttcaaaatgtacaggttacttctggaagtcttggcctttctacagcaactgttaagctcattgatgctgatggtcgagagcatatttcttgttctgttggaacggggccagttgacgcggcttataaggcagttgatctcattgttaaggtacctgtaacactccttgagtattccatgaatgcagtcacacaaggtatagatgctatagcttcaaccagagtcttaattcgtggagaaaatggccatacatcaacccatgccgtaactggagagactattcacc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0167M06.1" temp_strand="-" temp_description="C06HBa0167M06.1  AC211057.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0167M06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="33076" stop="25631"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="32776" g_stop="32736" g_length="41"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="41" r_length="41" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="32735" i_stop="32231" i_length="505">
            <donor d_prob="0.903" d_score="1.00"/>
            <acceptor a_prob="0.768" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="32230" g_stop="32138" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="42" r_stop="134" r_length="93" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="32137" i_stop="32053" i_length="85">
            <donor d_prob="0.851" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="32052" g_stop="31966" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="135" r_stop="221" r_length="87" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="31965" i_stop="29182" i_length="2784">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.988" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="29181" g_stop="29081" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="222" r_stop="322" r_length="101" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="29080" i_stop="28616" i_length="465">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="28615" g_stop="28582" g_length="34"/>
          <reference_exon_boundary r_type="cDNA" r_start="323" r_stop="356" r_length="34" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="28581" i_stop="28505" i_length="77">
            <donor d_prob="0.989" d_score="0.00"/>
            <acceptor a_prob="0.668" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="28504" g_stop="28430" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="357" r_stop="431" r_length="75" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="28429" i_stop="27686" i_length="744">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.924" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="27685" g_stop="27602" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="432" r_stop="515" r_length="84" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="27601" i_stop="27504" i_length="98">
            <donor d_prob="0.957" d_score="1.00"/>
            <acceptor a_prob="0.667" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="27503" g_stop="27369" g_length="135"/>
          <reference_exon_boundary r_type="cDNA" r_start="516" r_stop="650" r_length="135" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="27368" i_stop="26067" i_length="1302">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="26066" g_stop="25931" g_length="136"/>
          <reference_exon_boundary r_type="cDNA" r_start="651" r_stop="786" r_length="136" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0167M06.1" gen_strand="-" ref_id="SGN-E689371" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>786</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0167M06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E689371" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="32776" e_stop="32736"/>
          <exon e_start="32230" e_stop="32138"/>
          <exon e_start="32052" e_stop="31966"/>
          <exon e_start="29181" e_stop="29081"/>
          <exon e_start="28615" e_stop="28582"/>
          <exon e_start="28504" e_stop="28430"/>
          <exon e_start="27685" e_stop="27602"/>
          <exon e_start="27503" e_stop="27369"/>
          <exon e_start="26066" e_stop="25931"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGGAATTGGTGAAAGAGCTGGAAATGCTTCTTTAGAGGAGGTGTGTGAGGGCTTTCCGCTGAGAAATTTCAGTTCTCTTATGTGCATGATTTGGGCTCCAAAATTTGAGGGGTGGAATCACTAATTAAACAACCTTGACTATAAGTTCCCCTCTGTTCTTTCCTTGAAAAAAAGTTAGGTCTTCAAAGAAATTTCCCATAATTGCGTAAGGCATTCTCCACACAAAAGGAACTATTCCACCTCTTCCTAGAGTAAATTAACATCTTTAATTTAGACTGAATGACTGATACTAGAGTAGAAGTTGTGTGGTATGTAATATTATTCTTTTGCAAAACAATAGTTGCAAACATGCAACCGTATTTTGCCATTTTGGTCTTTGGAGCCAATTTCTGCCATTGGTTGTGTTATGTGCTGTTTAAACTGACAAACTACTGACGTTCATGAGACTCCTTTTTCCTCTGTGGTACTTGTTTGTCTTTGGTTTTCATCTTGGGCATGTCGGGCCTTCATTTTCTAACCTTTTACCATGTCCAATGCCGGAATAGGTTGTAATGGCCTTAAAGTGTCGTGGAGAGCAAGTACTAGGTGGCCTATATACAGGGATTAATACACAACATATACTCATGTCAAGCAAGATGGTTTGTACCCCTACTATCTCATAGTATGGTGATCTTTTACTGGTTAATATTCTTCCAATATGCATTCTGACCCTTTATCGTGCAGGTAGAGGAGTATTCCGGACTTCATGTGCAGCCACACAAAGCCATTGTTGGAGCTAATGCCTTTGCTCATGAAAGTGGCATCCATCAGGTTTGTGTAATTTGCTCTCGTTTATTGTTGAAAGAAACAATTCCTGAAAGAGGCAAATCTTCTTACCAGTTTATGGACATCTTTTCTTTTCAACGATCAACCAAATTACTGATGGAATGGTGTTCCAAGTTCCCTGATTTACTTCCCCAGACCTCATAGATTTCAGCTTAACAGCAGCTCTTCTGTAGTCCTGAGAAAGAGACTCTAGCTCTATGAGTTGAAGGAGCAATGAAGAAATAAATGGTTGAGTCGTCACTTTGCTTTCAACGAAGGCAAACCAAATACATATATTGAAACCCCTTTTCTGAAGATTTTCATGTTTAGGGCGAGGTTCTTTTGTCATCAACCAAGCAAAACAATCGAACTTTCAGAGGTTCCCTATTTTCCCAAATGCATTTCCAAGGCCAATTTTCAATGACAGCGGGATTTATCCCTGATAACAGGATTTGACCGTGAAAATTCCGTTAAGATCATATTTTCACTTTAGAGAATCAGACCGGAGTTGAAGGGTGGGGGGTGGTTCTATGGCGTCTGAGAAGCAAAAAGCACAGTTATCCAATTCCCAATCATTAATATTGAGCATGAATCTGATGTTCCAGCCTTTTTCACTCCTGTAATCTGACAGAGATGCTTCAGAATTTGGCGCCATAGTGAATAATGTTGGGTACTGGTTTTTGGAGGTTATTGCACAAGTCACATATCTATCCAAGACCTTACTTTCCAGCCATTTTCAATTACAGTTGAGGTCTTGGATAGAAAGAGTCCTACTGTGCACTCATATGCCTCCATACACCACATGAATTAGGAAAATTTGGATGTTTCGTAATCCATGGGTTGGAAAGTCTGTATTTAGCCGTAATAACATCTCTCCATAAAGCTCCCTCCTCCCTATTAAATCTCTAGAGCCGTTTGTGTTGCAAGAAAATACTATGAACCCTCAGATATTTGTTCCCCATGCCCCCAGCCTTCTTGTCAGTAGAAACCGTATCCCTTTTTGAAAGACTTGTTTTGTCTATTCCCTTGTCACAGAAAATCCCTTTACACACTATTGATTAGTACTAGCCTACCTTCCAATGAGTGATGTTATGATAACTTCCTTTTTGCACTTTTCCTCCCATCCCAGATTGTAGTGGCTTGAGACTTTGACCCCAAAGGAAGGCTGAAAGCCTAATTGTTTAATGGGAAAAGAGCCTACTCCACAACTCAAGGTGTCAGCTATTTCCTATAAGTTGATCATTTCGTTCACAGGACAAAAAACACTCTTTGTATAATTAACTTGAAGACCATAATTCGCTTTGAAGAACAAAGTACCATATGAAGTTGTACAATCTGATCATTTCAGTTTTGCAAAAAAAATAAAATAAAAAAATAGAGTGAATCATCTGCATAGAAAAGGCAAGTAAGATGCAGTTTTCCTTGATTTCTCAGACTTGGGTTAAAGCCTTTTATCTTGTCATGTAGTTTTGCTGTTGACAACATTCTTCTTAGACATAACATATCCAAGATAAACAGAAAAGGAGAAAGCGAATCTTCTTGTCTAAAACCTTTTGGTGAAGCAAAAAAGTCTTTAGGTGATCCATTTATGATAATGGATGACATGACAATGGAGATGCAAAATTGGATCCACTTGATTTATTTATTGCCGGAGCTCATGAATTTTAATATGTTGACAAGGATAGGGTGGCAATGGGGCAGGTCATGGGCGGGGCTGGGCAGGGTAAAGAATTAACTTGGCAGGGTGGGGCAATATTTAAATGGGGCAGGGCAGGACAGGTCATAGCTAATATTTTTTTAAAATTTTAATAGTGCAGGGCAGGTGTGAGTTCATGAGAGGTTCCTTAGTGTTTTGAACACTGTAGCTTGCTAGCAATGCTTAGGTTGAATCCCGAAGGAAGTTTTCCGATGTTTCTGAGCATATAATTATCCTTTATTCGGGTTATTTGATTAACAAAAAATTTAAGAATTCATTTGCGTTTTGAACACTGTAGCTTTTTACTTATATTTAACCAGTTTATCACTTTGTGTTATTTAAAAGTTAAACAGAACATTAAAAAGTGGGAAAAATAAATTAACACTTAAATGGGGCAGGGCGGGCAAAATGTTGGAAAATTCTAGGCAGAGCAGGGTAGGGCGGGTTAAATTCTTAACGGGTCAAGGCTTGCTCAGCGCTAGCCATCCCTATCGCCATCCCTGGATAAGGGATTCCAATGAACGTTGTCAAAGACTTTCTCGCTCACAGCTTAACGTGAGACGTTTAAGATAAACTGAGAAGCCTCAAAGACCCAACAAACAATTAGAAGTTGCTCCAAGTTTTCCTTCTTGGGGCATTAGATTATAATAAACATTTGGTACCAATATTCCAGGAGGTGCAGAGATATTATACCTACTGACGTAAAAGAACTTCCATCAGGAGTTTGAATCTGCTTACTCTTTTATATTTCTGATTATTCATTTGTTTATGGCCCTTCTCATTTTAGATGTGTAGTTACTGATCTTATATTTGAATATCTATGGATAAATCTTCCACATATTTAGTTAGAGCTCGATTAATTGTCCTGTTAGCATTTGTTTTTGATTCATCTTCAAATGCATAAAGTTTTTCAGTTAAACTTCTTTGAATATATGTAGTATATTATGTCTCTCCTCCCGTTTCTTCCTTACCTCAAAGCTGGATTCGCACCTTTTTGTAACCGTTCAGTTGTGAATCAAAAAAAAAAGGAAAAAATATTTCAGTTTTTCCTTTTCAATCTCTTCTCCTTCTTAAACTACTTTTATGCTCTTTAGGATGGAATGTTAAAACACAAAGATACATATGAGATTATATCTCCTGAAGATATTGGGCTTAATCGTGCTAATGAATCTGGTATTGTCCTTGGGAAACTCAGGTATGTGATTTACCAATCAATGCTTATTGCTGTGATAGCTTAAGTGTTAGATTTCTGCGCTGTTTGAGTTTTTAGTTTTTATCCCTTGATTATTGAACTTGCTTAGCAAAGTACATTCTTTTAGTTGCTATGAGGTTAGTATTTCTTTAGTACTTGAGTAAGGCTTCCCTGATCCATAGACACTCACACAGTTGCTGTTTCAAATAGTGAATCATACCTTTGTTGTTTTAAAACAGTGTGGAGGTATATAGGAACTTCCTCTCTTCTATGGAGAGGTAAAGTAGAAGCTTATTGAGTTTGCCTCACTTTAATATGGTCAGAGCCACAATTGCATGAAATAATTATCATCACAGTCTGTAACTTAATCCCTCTCGTGCCCTCCTTCCTAACCTGCTCTATTCATTATTTACATTGAATTACATCATGTCTTCAAGGAAATTGATACGTTGAACATTTTTTTTGTAGTGGGCGTCATGCTTTGCAAGCCAAAATGCTTGAGGTAAATTGCATGCTCTGAGAATTTTGTTTATTTCTTAAATTTAAGAGCACGAGACAAATCGTTTTAGTCCTATGCAGCTTGGATACGAGATTGAGGGCAAAGAACTTGATGACCTGTTCTGGCGATTCAAATCTGTGGCTGAGAAGAAAAAGGTGAATTAAGATTTTGAAATTTCCACTGTTGTTTGGTATATTTACGTCATCATTCAAATGCATTTGGAGTGGTGGAGTTTAGTAAATTTGCTACATTGAAAATTCATGGAAGGGGATTGATGGCTGGAACATTTTCTCCTTTCTAGGTAACCTAGTGACTAGAACATGAGCTAAAAATATAGTTACGATCTCTCTCTCTCTCTCTCCCTTTTCACATTCAGTAAATCTTAAGTACGTCACATCTTCAAATTTTGTGAATTTTAGTGTCTTTATTCATCTATGTATCTGGGTTGTACATTAATTTTTGTGGAGTAGGAAACAACTGGTGTGTAAGAACTTCTAAGATATTGTGAAGTGAGATGAACTAAAGTATCAGAAAAGGTGGAAGTGAGAGTAGAAACAGATAAAGAAAATTGAGCATGAATGCGAATGGAAAGATTGGGCAGAGTTCAGGATACCTTCTGAACCAAGATAATCTGTCCTATTATTACTGGTATATTATAAAGTATAAACTACAGCTTTTCTCAAGGTGGGGAAACTGTCAAATTTGTGCTAAGACCCTTTAAACCTTCTTTTGGTTGTCAAAGTTTCCTCTGCTCATTTGAAAGGGTTATTTGGCTAATTATACTTTTATCAGTTAAATTATAATTAAAATTAAGGTTAAGAACTGTGTGGATCTCATATGATATTGGTATCGTGGACATATTTTTTGGCCATCTATTTATCTCCACGCTGCTATTTCAGAAAATTACAGATGATGACCTGGTAGCACTGATGTCAGATGAGGTTTTCCAGCCTCAATTTGTGTGGCAACTTCAAAATGTACAGGTAGATATTAATGTTGACTATATCTGCACTGTTTTAACTTTGATCTGGATTAAAAAGGATGGTTCAGCTGATTGAAAGACTTCCTGCTCTATGGACAGGTTACTTCTGGAAGTCTTGGCCTTTCTACAGCAACTGTTAAGCTCATTGATGCTGATGGTCGAGAGCATATTTCTTGTTCTGTTGGAACGGGGCCAGTTGACGCGGCTTATAAGGCAGTTGATCTCATTGTTAAGGTATGAAATAGAAATGAAACTCCTAATAATAAATAATCTTGTCACAGTGCTAGGACCCATGTTGATTGCAAGCCGATCAGTATGTTATATTCAACTATAAATGGTTAATTACAAACTCATTTGGTGAATCTCTTTTATGCAAATCGTATTCATAATTATACATATACTAATATTATTTTTCCCCAGGCTATAGATGCATCAAGTTTGAGTTCTGTTGAGCAAAATATTTGGAAGCTCGTGATTTTTGATATATTGTCTTGTTGTGTCCTCTTACCTGTACTTTTTCCTCCGTCATATGTACTACATATAAAGTTGTCTTAGGGTGCACCAAGGTATGGACTAATGGTAAAAGAAGTGGGTTTAGAACTATGAGGTCTCGGGTTCAAATTCCTCAGAGACAAAACAAATAGGTGATTTCTTCTCATCTGTCCTAGCCTTAGTGGACAGATTACCTCATACCTATCCCGTGGAATTAGTCGAGTTGTCTGAAAGCTGGTCCAGACACCACGGTTATCCAAAAATAAAAGTTACCTTAGGGTCAATTGTTCTTTTGTACAACAGTATTCTTGCTGTTGAAGAAGTCGGGTCAACCCAAGTATATGTTGTACTTAAAAACTAAGAGCCTGTTTGGATTCACTTGAAAGTTGGTCAAACCTACTTTTAAGTCATTTTTAGTTTTGGGGATTGTTTGACATGGTTAAAAATAAGTTTAAAATGACCCAATCCAAACGGGCTCTAAGACTACATAATAAACCTCATGTGGAGTCCTATTCTAAAGCTAGTCCAAACCTAACCCAGCATCTAGTGCTGTATTCAATGATGACATCAGCAGACAACCCAAATCCTACATAACAAATGCAATTTTGCTATAATGTGCTGGGAAGATATTGCCGAGAATCTATTGGAAATAACCTCTCAACCTTTACAAGGCAGGGGCAAGGCTACGTACACACCACCCTCCCCAGACCCCACTTGTTTACACTGGGTGTGTTGTTGTACTGCGAAGATATCTTTTAAGAGCAGTTTTATCATTTTCCATATAATTGATGGACCTACTAGCTTTATAATAACTTCCCAAAAATAATTAAAACTATATTTGATATGCATTTTGAGTAGGAATTTTTACATTTTGAATTTGACTTACAAGCAGTTTTCTATATATCTTGAGAGAACCCAACTTTTTTGTTCGAGAAGATGGTGTTTGCCTCTAAATCAGCAGTCAAACTTGTCTCTATTTAATAATCTCTTTGGTTTAATGTGTATTATGGTCTGGTAATTCTAGTGTTCATGCATTTTGTGCAGGTACCTGTAACACTCCTTGAGTATTCCATGAATGCAGTCACACAAGGTATAGATGCTATAGCTTCAACCAGAGTCTTAATTCGTGGAGAAAATGGCCATACATCAACCCATGCCGTAACTGGAGAGACTATTCACC</genome_strand>
        <mrna_strand>ATGGAATTGGTGAAAGAGCTGGAAATGCTTCTTTAGAGGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTAATGGCCTTAAAGTGTCGTGGAGAGCAAGTACTAGGTGGCCTATATACAGGGATTAATACACAACATATACTCATGTCAAGCAAGATG.....................................................................................GTAGAGGAGTATTCCGGACTTCATGTGCAGCCACACAAAGCCATTGTTGGAGCTAATGCCTTTGCTCATGAAAGTGGCATCCATCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGGAATGTTAAAACACAAAGATACATATGAGATTATATCTCCTGAAGATATTGGGCTTAATCGTGCTAATGAATCTGGTATTGTCCTTGGGAAACTCAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGCGTCATGCTTTGCAAGCCAAAATGCTTGAG.............................................................................CTTGGATACGAGATTGAGGGCAAAGAACTTGATGACCTGTTCTGGCGATTCAAATCTGTGGCTGAGAAGAAAAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAATTACAGATGATGACCTGGTAGCACTGATGTCAGATGAGGTTTTCCAGCCTCAATTTGTGTGGCAACTTCAAAATGTACAG..................................................................................................GTTACTTCTGGAAGTCTTGGCCTTTCTACAGCAACTGTTAAGCTCATTGATGCTGATGGTCGAGAGCATATTTCTTGTTCTGTTGGAACGGGGCCAGTTGACGCGGCTTATAAGGCAGTTGATCTCATTGTTAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACCTGTAACACTCCTTGAGTATTCCATGAATGCAGTCACACAAGGTATAGATGCTATAGCTTCAACCAGAGTCTTAATTCGTGGAGAAAATGGCCATACATCAACCCATGCCGTAACTGGAGAGACTATTCACC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E408116" ref_strand="+" ref_description="SGN-E408116 [PPI-10-G17]">
      <seq>ttggaagtgaccatcaatggaattggtgaaagagctggaaatgcttctttagaggaggttgtaatggccttaaagtgtcgtggagagcaagtactaggtggcctatatacagggattaatacacaacatatactcatgtcaagcaagatggtagaggagtactcgggacttcatgtgcagccacacaaggccattgttggagctaatgcctttgctcatgaaagtggcatccatcaggatggaatgctaaaacacaaagatacatatgagattatatctcctgaagatattgggcttaatcgtgctaataaatctggtattgtcctcgggaaactcagtgggcgtcatgctttgcaagctaaaatgcttgagcttggatacgaaattgagggaaaagaacttgatgacctcttctggcgattcaaatctgtggctgagaagaaaaagaaaattacagatgatgacctgatagcactgatgtcagatgaagttttccagcctcaatttgtttggcaacttcaaaatgtacaggttacttgtggaagtcttggtctttctacagcaaccgttaagctcattgatgctgatggtcaagagcatatttcttgttctgttggaacggggccagttgacgcggcttataaggcagttgatctcattgtcaaggtacctgtaacactccttgagtattccatgaatgcagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0167M06.1" temp_strand="-" temp_description="C06HBa0167M06.1  AC211057.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0167M06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="33092" stop="25729"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="32792" g_stop="32736" g_length="57"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="57" r_length="57" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="32735" i_stop="32231" i_length="505">
            <donor d_prob="0.903" d_score="1.00"/>
            <acceptor a_prob="0.768" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="32230" g_stop="32138" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="58" r_stop="150" r_length="93" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="32137" i_stop="32053" i_length="85">
            <donor d_prob="0.851" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="32052" g_stop="31966" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="151" r_stop="237" r_length="87" r_score="0.966"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="31965" i_stop="29182" i_length="2784">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.988" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="29181" g_stop="29081" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="238" r_stop="338" r_length="101" r_score="0.970"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="29080" i_stop="28616" i_length="465">
            <donor d_prob="0.999" d_score="0.96"/>
            <acceptor a_prob="0.984" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="28615" g_stop="28582" g_length="34"/>
          <reference_exon_boundary r_type="cDNA" r_start="339" r_stop="372" r_length="34" r_score="0.971"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="28581" i_stop="28505" i_length="77">
            <donor d_prob="0.989" d_score="0.00"/>
            <acceptor a_prob="0.668" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="28504" g_stop="28430" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="373" r_stop="447" r_length="75" r_score="0.960"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="28429" i_stop="27686" i_length="744">
            <donor d_prob="0.985" d_score="0.98"/>
            <acceptor a_prob="0.924" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="27685" g_stop="27602" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="448" r_stop="531" r_length="84" r_score="0.964"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="27601" i_stop="27504" i_length="98">
            <donor d_prob="0.957" d_score="0.96"/>
            <acceptor a_prob="0.667" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="27503" g_stop="27369" g_length="135"/>
          <reference_exon_boundary r_type="cDNA" r_start="532" r_stop="666" r_length="135" r_score="0.963"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="27368" i_stop="26067" i_length="1302">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="26066" g_stop="26029" g_length="38"/>
          <reference_exon_boundary r_type="cDNA" r_start="667" r_stop="704" r_length="38" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0167M06.1" gen_strand="-" ref_id="SGN-E408116" ref_strand="+">
        <total_alignment_score>0.973</total_alignment_score>
        <cumulative_length_of_scored_exons>704</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0167M06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E408116" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="32792" e_stop="32736"/>
          <exon e_start="32230" e_stop="32138"/>
          <exon e_start="32052" e_stop="31966"/>
          <exon e_start="29181" e_stop="29081"/>
          <exon e_start="28615" e_stop="28582"/>
          <exon e_start="28504" e_stop="28430"/>
          <exon e_start="27685" e_stop="27602"/>
          <exon e_start="27503" e_stop="27369"/>
          <exon e_start="26066" e_stop="26029"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGGAAGTGACCATCAATGGAATTGGTGAAAGAGCTGGAAATGCTTCTTTAGAGGAGGTGTGTGAGGGCTTTCCGCTGAGAAATTTCAGTTCTCTTATGTGCATGATTTGGGCTCCAAAATTTGAGGGGTGGAATCACTAATTAAACAACCTTGACTATAAGTTCCCCTCTGTTCTTTCCTTGAAAAAAAGTTAGGTCTTCAAAGAAATTTCCCATAATTGCGTAAGGCATTCTCCACACAAAAGGAACTATTCCACCTCTTCCTAGAGTAAATTAACATCTTTAATTTAGACTGAATGACTGATACTAGAGTAGAAGTTGTGTGGTATGTAATATTATTCTTTTGCAAAACAATAGTTGCAAACATGCAACCGTATTTTGCCATTTTGGTCTTTGGAGCCAATTTCTGCCATTGGTTGTGTTATGTGCTGTTTAAACTGACAAACTACTGACGTTCATGAGACTCCTTTTTCCTCTGTGGTACTTGTTTGTCTTTGGTTTTCATCTTGGGCATGTCGGGCCTTCATTTTCTAACCTTTTACCATGTCCAATGCCGGAATAGGTTGTAATGGCCTTAAAGTGTCGTGGAGAGCAAGTACTAGGTGGCCTATATACAGGGATTAATACACAACATATACTCATGTCAAGCAAGATGGTTTGTACCCCTACTATCTCATAGTATGGTGATCTTTTACTGGTTAATATTCTTCCAATATGCATTCTGACCCTTTATCGTGCAGGTAGAGGAGTATTCCGGACTTCATGTGCAGCCACACAAAGCCATTGTTGGAGCTAATGCCTTTGCTCATGAAAGTGGCATCCATCAGGTTTGTGTAATTTGCTCTCGTTTATTGTTGAAAGAAACAATTCCTGAAAGAGGCAAATCTTCTTACCAGTTTATGGACATCTTTTCTTTTCAACGATCAACCAAATTACTGATGGAATGGTGTTCCAAGTTCCCTGATTTACTTCCCCAGACCTCATAGATTTCAGCTTAACAGCAGCTCTTCTGTAGTCCTGAGAAAGAGACTCTAGCTCTATGAGTTGAAGGAGCAATGAAGAAATAAATGGTTGAGTCGTCACTTTGCTTTCAACGAAGGCAAACCAAATACATATATTGAAACCCCTTTTCTGAAGATTTTCATGTTTAGGGCGAGGTTCTTTTGTCATCAACCAAGCAAAACAATCGAACTTTCAGAGGTTCCCTATTTTCCCAAATGCATTTCCAAGGCCAATTTTCAATGACAGCGGGATTTATCCCTGATAACAGGATTTGACCGTGAAAATTCCGTTAAGATCATATTTTCACTTTAGAGAATCAGACCGGAGTTGAAGGGTGGGGGGTGGTTCTATGGCGTCTGAGAAGCAAAAAGCACAGTTATCCAATTCCCAATCATTAATATTGAGCATGAATCTGATGTTCCAGCCTTTTTCACTCCTGTAATCTGACAGAGATGCTTCAGAATTTGGCGCCATAGTGAATAATGTTGGGTACTGGTTTTTGGAGGTTATTGCACAAGTCACATATCTATCCAAGACCTTACTTTCCAGCCATTTTCAATTACAGTTGAGGTCTTGGATAGAAAGAGTCCTACTGTGCACTCATATGCCTCCATACACCACATGAATTAGGAAAATTTGGATGTTTCGTAATCCATGGGTTGGAAAGTCTGTATTTAGCCGTAATAACATCTCTCCATAAAGCTCCCTCCTCCCTATTAAATCTCTAGAGCCGTTTGTGTTGCAAGAAAATACTATGAACCCTCAGATATTTGTTCCCCATGCCCCCAGCCTTCTTGTCAGTAGAAACCGTATCCCTTTTTGAAAGACTTGTTTTGTCTATTCCCTTGTCACAGAAAATCCCTTTACACACTATTGATTAGTACTAGCCTACCTTCCAATGAGTGATGTTATGATAACTTCCTTTTTGCACTTTTCCTCCCATCCCAGATTGTAGTGGCTTGAGACTTTGACCCCAAAGGAAGGCTGAAAGCCTAATTGTTTAATGGGAAAAGAGCCTACTCCACAACTCAAGGTGTCAGCTATTTCCTATAAGTTGATCATTTCGTTCACAGGACAAAAAACACTCTTTGTATAATTAACTTGAAGACCATAATTCGCTTTGAAGAACAAAGTACCATATGAAGTTGTACAATCTGATCATTTCAGTTTTGCAAAAAAAATAAAATAAAAAAATAGAGTGAATCATCTGCATAGAAAAGGCAAGTAAGATGCAGTTTTCCTTGATTTCTCAGACTTGGGTTAAAGCCTTTTATCTTGTCATGTAGTTTTGCTGTTGACAACATTCTTCTTAGACATAACATATCCAAGATAAACAGAAAAGGAGAAAGCGAATCTTCTTGTCTAAAACCTTTTGGTGAAGCAAAAAAGTCTTTAGGTGATCCATTTATGATAATGGATGACATGACAATGGAGATGCAAAATTGGATCCACTTGATTTATTTATTGCCGGAGCTCATGAATTTTAATATGTTGACAAGGATAGGGTGGCAATGGGGCAGGTCATGGGCGGGGCTGGGCAGGGTAAAGAATTAACTTGGCAGGGTGGGGCAATATTTAAATGGGGCAGGGCAGGACAGGTCATAGCTAATATTTTTTTAAAATTTTAATAGTGCAGGGCAGGTGTGAGTTCATGAGAGGTTCCTTAGTGTTTTGAACACTGTAGCTTGCTAGCAATGCTTAGGTTGAATCCCGAAGGAAGTTTTCCGATGTTTCTGAGCATATAATTATCCTTTATTCGGGTTATTTGATTAACAAAAAATTTAAGAATTCATTTGCGTTTTGAACACTGTAGCTTTTTACTTATATTTAACCAGTTTATCACTTTGTGTTATTTAAAAGTTAAACAGAACATTAAAAAGTGGGAAAAATAAATTAACACTTAAATGGGGCAGGGCGGGCAAAATGTTGGAAAATTCTAGGCAGAGCAGGGTAGGGCGGGTTAAATTCTTAACGGGTCAAGGCTTGCTCAGCGCTAGCCATCCCTATCGCCATCCCTGGATAAGGGATTCCAATGAACGTTGTCAAAGACTTTCTCGCTCACAGCTTAACGTGAGACGTTTAAGATAAACTGAGAAGCCTCAAAGACCCAACAAACAATTAGAAGTTGCTCCAAGTTTTCCTTCTTGGGGCATTAGATTATAATAAACATTTGGTACCAATATTCCAGGAGGTGCAGAGATATTATACCTACTGACGTAAAAGAACTTCCATCAGGAGTTTGAATCTGCTTACTCTTTTATATTTCTGATTATTCATTTGTTTATGGCCCTTCTCATTTTAGATGTGTAGTTACTGATCTTATATTTGAATATCTATGGATAAATCTTCCACATATTTAGTTAGAGCTCGATTAATTGTCCTGTTAGCATTTGTTTTTGATTCATCTTCAAATGCATAAAGTTTTTCAGTTAAACTTCTTTGAATATATGTAGTATATTATGTCTCTCCTCCCGTTTCTTCCTTACCTCAAAGCTGGATTCGCACCTTTTTGTAACCGTTCAGTTGTGAATCAAAAAAAAAAGGAAAAAATATTTCAGTTTTTCCTTTTCAATCTCTTCTCCTTCTTAAACTACTTTTATGCTCTTTAGGATGGAATGTTAAAACACAAAGATACATATGAGATTATATCTCCTGAAGATATTGGGCTTAATCGTGCTAATGAATCTGGTATTGTCCTTGGGAAACTCAGGTATGTGATTTACCAATCAATGCTTATTGCTGTGATAGCTTAAGTGTTAGATTTCTGCGCTGTTTGAGTTTTTAGTTTTTATCCCTTGATTATTGAACTTGCTTAGCAAAGTACATTCTTTTAGTTGCTATGAGGTTAGTATTTCTTTAGTACTTGAGTAAGGCTTCCCTGATCCATAGACACTCACACAGTTGCTGTTTCAAATAGTGAATCATACCTTTGTTGTTTTAAAACAGTGTGGAGGTATATAGGAACTTCCTCTCTTCTATGGAGAGGTAAAGTAGAAGCTTATTGAGTTTGCCTCACTTTAATATGGTCAGAGCCACAATTGCATGAAATAATTATCATCACAGTCTGTAACTTAATCCCTCTCGTGCCCTCCTTCCTAACCTGCTCTATTCATTATTTACATTGAATTACATCATGTCTTCAAGGAAATTGATACGTTGAACATTTTTTTTGTAGTGGGCGTCATGCTTTGCAAGCCAAAATGCTTGAGGTAAATTGCATGCTCTGAGAATTTTGTTTATTTCTTAAATTTAAGAGCACGAGACAAATCGTTTTAGTCCTATGCAGCTTGGATACGAGATTGAGGGCAAAGAACTTGATGACCTGTTCTGGCGATTCAAATCTGTGGCTGAGAAGAAAAAGGTGAATTAAGATTTTGAAATTTCCACTGTTGTTTGGTATATTTACGTCATCATTCAAATGCATTTGGAGTGGTGGAGTTTAGTAAATTTGCTACATTGAAAATTCATGGAAGGGGATTGATGGCTGGAACATTTTCTCCTTTCTAGGTAACCTAGTGACTAGAACATGAGCTAAAAATATAGTTACGATCTCTCTCTCTCTCTCTCCCTTTTCACATTCAGTAAATCTTAAGTACGTCACATCTTCAAATTTTGTGAATTTTAGTGTCTTTATTCATCTATGTATCTGGGTTGTACATTAATTTTTGTGGAGTAGGAAACAACTGGTGTGTAAGAACTTCTAAGATATTGTGAAGTGAGATGAACTAAAGTATCAGAAAAGGTGGAAGTGAGAGTAGAAACAGATAAAGAAAATTGAGCATGAATGCGAATGGAAAGATTGGGCAGAGTTCAGGATACCTTCTGAACCAAGATAATCTGTCCTATTATTACTGGTATATTATAAAGTATAAACTACAGCTTTTCTCAAGGTGGGGAAACTGTCAAATTTGTGCTAAGACCCTTTAAACCTTCTTTTGGTTGTCAAAGTTTCCTCTGCTCATTTGAAAGGGTTATTTGGCTAATTATACTTTTATCAGTTAAATTATAATTAAAATTAAGGTTAAGAACTGTGTGGATCTCATATGATATTGGTATCGTGGACATATTTTTTGGCCATCTATTTATCTCCACGCTGCTATTTCAGAAAATTACAGATGATGACCTGGTAGCACTGATGTCAGATGAGGTTTTCCAGCCTCAATTTGTGTGGCAACTTCAAAATGTACAGGTAGATATTAATGTTGACTATATCTGCACTGTTTTAACTTTGATCTGGATTAAAAAGGATGGTTCAGCTGATTGAAAGACTTCCTGCTCTATGGACAGGTTACTTCTGGAAGTCTTGGCCTTTCTACAGCAACTGTTAAGCTCATTGATGCTGATGGTCGAGAGCATATTTCTTGTTCTGTTGGAACGGGGCCAGTTGACGCGGCTTATAAGGCAGTTGATCTCATTGTTAAGGTATGAAATAGAAATGAAACTCCTAATAATAAATAATCTTGTCACAGTGCTAGGACCCATGTTGATTGCAAGCCGATCAGTATGTTATATTCAACTATAAATGGTTAATTACAAACTCATTTGGTGAATCTCTTTTATGCAAATCGTATTCATAATTATACATATACTAATATTATTTTTCCCCAGGCTATAGATGCATCAAGTTTGAGTTCTGTTGAGCAAAATATTTGGAAGCTCGTGATTTTTGATATATTGTCTTGTTGTGTCCTCTTACCTGTACTTTTTCCTCCGTCATATGTACTACATATAAAGTTGTCTTAGGGTGCACCAAGGTATGGACTAATGGTAAAAGAAGTGGGTTTAGAACTATGAGGTCTCGGGTTCAAATTCCTCAGAGACAAAACAAATAGGTGATTTCTTCTCATCTGTCCTAGCCTTAGTGGACAGATTACCTCATACCTATCCCGTGGAATTAGTCGAGTTGTCTGAAAGCTGGTCCAGACACCACGGTTATCCAAAAATAAAAGTTACCTTAGGGTCAATTGTTCTTTTGTACAACAGTATTCTTGCTGTTGAAGAAGTCGGGTCAACCCAAGTATATGTTGTACTTAAAAACTAAGAGCCTGTTTGGATTCACTTGAAAGTTGGTCAAACCTACTTTTAAGTCATTTTTAGTTTTGGGGATTGTTTGACATGGTTAAAAATAAGTTTAAAATGACCCAATCCAAACGGGCTCTAAGACTACATAATAAACCTCATGTGGAGTCCTATTCTAAAGCTAGTCCAAACCTAACCCAGCATCTAGTGCTGTATTCAATGATGACATCAGCAGACAACCCAAATCCTACATAACAAATGCAATTTTGCTATAATGTGCTGGGAAGATATTGCCGAGAATCTATTGGAAATAACCTCTCAACCTTTACAAGGCAGGGGCAAGGCTACGTACACACCACCCTCCCCAGACCCCACTTGTTTACACTGGGTGTGTTGTTGTACTGCGAAGATATCTTTTAAGAGCAGTTTTATCATTTTCCATATAATTGATGGACCTACTAGCTTTATAATAACTTCCCAAAAATAATTAAAACTATATTTGATATGCATTTTGAGTAGGAATTTTTACATTTTGAATTTGACTTACAAGCAGTTTTCTATATATCTTGAGAGAACCCAACTTTTTTGTTCGAGAAGATGGTGTTTGCCTCTAAATCAGCAGTCAAACTTGTCTCTATTTAATAATCTCTTTGGTTTAATGTGTATTATGGTCTGGTAATTCTAGTGTTCATGCATTTTGTGCAGGTACCTGTAACACTCCTTGAGTATTCCATGAATGCAGT</genome_strand>
        <mrna_strand>TTGGAAGTGACCATCAATGGAATTGGTGAAAGAGCTGGAAATGCTTCTTTAGAGGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTAATGGCCTTAAAGTGTCGTGGAGAGCAAGTACTAGGTGGCCTATATACAGGGATTAATACACAACATATACTCATGTCAAGCAAGATG.....................................................................................GTAGAGGAGTACTCGGGACTTCATGTGCAGCCACACAAGGCCATTGTTGGAGCTAATGCCTTTGCTCATGAAAGTGGCATCCATCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGGAATGCTAAAACACAAAGATACATATGAGATTATATCTCCTGAAGATATTGGGCTTAATCGTGCTAATAAATCTGGTATTGTCCTCGGGAAACTCAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGCGTCATGCTTTGCAAGCTAAAATGCTTGAG.............................................................................CTTGGATACGAAATTGAGGGAAAAGAACTTGATGACCTCTTCTGGCGATTCAAATCTGTGGCTGAGAAGAAAAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAATTACAGATGATGACCTGATAGCACTGATGTCAGATGAAGTTTTCCAGCCTCAATTTGTTTGGCAACTTCAAAATGTACAG..................................................................................................GTTACTTGTGGAAGTCTTGGTCTTTCTACAGCAACCGTTAAGCTCATTGATGCTGATGGTCAAGAGCATATTTCTTGTTCTGTTGGAACGGGGCCAGTTGACGCGGCTTATAAGGCAGTTGATCTCATTGTCAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACCTGTAACACTCCTTGAGTATTCCATGAATGCAGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E332971" ref_strand="+" ref_description="SGN-E332971 [cTOD-19-N9]">
      <seq>tggaattggtgaaagagctggaaatgcttctttagaggaggttgtaatggccttaaagtgtcgtggagaagcaagtactaggtggcctatatacagggattaatacacaacatatactcatgtcaagcaagatggtagaggagtatttccggacttcatgtgcagccacacaaagccattgttggagctaatgcctttgctcatgaaagtggcatccatcaggatggaatgttanaacacaaagatacatatgagattatatctcctgaagatattgngcttaatcgtgctaatgaatctggtattgtccttgggaaactcagtgggcgtcatgctttgcaagccaaaatgcttgagcttggatacgagattgagggcaaagaacttgatgacctgttctggcgattcaaatctgtggctgagaagaaaagaaaattacagatgatgacctggtagcactgatgtcagatgangttttccagcctcaatttgtgtggcaacttcaaaatgtacaggttacttctggaagtcttggcctttctacagcaactgttaagctcattgatgctgatggtcgagagcatatttcttgttctgttggaaacgggccagttgacgcggct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0167M06.1" temp_strand="-" temp_description="C06HBa0167M06.1  AC211057.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0167M06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="33075" stop="27096"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="32775" g_stop="32736" g_length="40"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="40" r_length="40" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="32735" i_stop="32231" i_length="505">
            <donor d_prob="0.903" d_score="1.00"/>
            <acceptor a_prob="0.768" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="32230" g_stop="32138" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="41" r_stop="134" r_length="94" r_score="0.978"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="32137" i_stop="32053" i_length="85">
            <donor d_prob="0.851" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="32052" g_stop="31966" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="135" r_stop="222" r_length="88" r_score="0.977"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="31965" i_stop="29182" i_length="2784">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.988" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="29181" g_stop="29081" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="223" r_stop="323" r_length="101" r_score="0.980"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="29080" i_stop="28616" i_length="465">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.984" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="28615" g_stop="28582" g_length="34"/>
          <reference_exon_boundary r_type="cDNA" r_start="324" r_stop="357" r_length="34" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="28581" i_stop="28505" i_length="77">
            <donor d_prob="0.989" d_score="0.00"/>
            <acceptor a_prob="0.668" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="28504" g_stop="28430" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="358" r_stop="431" r_length="74" r_score="0.987"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="28429" i_stop="27686" i_length="744">
            <donor d_prob="0.985" d_score="0.98"/>
            <acceptor a_prob="0.924" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="27685" g_stop="27602" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="432" r_stop="515" r_length="84" r_score="0.988"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="27601" i_stop="27504" i_length="98">
            <donor d_prob="0.957" d_score="0.98"/>
            <acceptor a_prob="0.667" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="27503" g_stop="27396" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="516" r_stop="623" r_length="108" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0167M06.1" gen_strand="-" ref_id="SGN-E332971" ref_strand="+">
        <total_alignment_score>0.982</total_alignment_score>
        <cumulative_length_of_scored_exons>622</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0167M06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E332971" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="32775" e_stop="32736"/>
          <exon e_start="32230" e_stop="32138"/>
          <exon e_start="32052" e_stop="31966"/>
          <exon e_start="29181" e_stop="29081"/>
          <exon e_start="28615" e_stop="28582"/>
          <exon e_start="28504" e_stop="28430"/>
          <exon e_start="27685" e_stop="27602"/>
          <exon e_start="27503" e_stop="27396"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGAATTGGTGAAAGAGCTGGAAATGCTTCTTTAGAGGAGGTGTGTGAGGGCTTTCCGCTGAGAAATTTCAGTTCTCTTATGTGCATGATTTGGGCTCCAAAATTTGAGGGGTGGAATCACTAATTAAACAACCTTGACTATAAGTTCCCCTCTGTTCTTTCCTTGAAAAAAAGTTAGGTCTTCAAAGAAATTTCCCATAATTGCGTAAGGCATTCTCCACACAAAAGGAACTATTCCACCTCTTCCTAGAGTAAATTAACATCTTTAATTTAGACTGAATGACTGATACTAGAGTAGAAGTTGTGTGGTATGTAATATTATTCTTTTGCAAAACAATAGTTGCAAACATGCAACCGTATTTTGCCATTTTGGTCTTTGGAGCCAATTTCTGCCATTGGTTGTGTTATGTGCTGTTTAAACTGACAAACTACTGACGTTCATGAGACTCCTTTTTCCTCTGTGGTACTTGTTTGTCTTTGGTTTTCATCTTGGGCATGTCGGGCCTTCATTTTCTAACCTTTTACCATGTCCAATGCCGGAATAGGTTGTAATGGCCTTAAAGTGTCGTGGAGA-GCAAGTACTAGGTGGCCTATATACAGGGATTAATACACAACATATACTCATGTCAAGCAAGATGGTTTGTACCCCTACTATCTCATAGTATGGTGATCTTTTACTGGTTAATATTCTTCCAATATGCATTCTGACCCTTTATCGTGCAGGTAGAGGAGTA-TTCCGGACTTCATGTGCAGCCACACAAAGCCATTGTTGGAGCTAATGCCTTTGCTCATGAAAGTGGCATCCATCAGGTTTGTGTAATTTGCTCTCGTTTATTGTTGAAAGAAACAATTCCTGAAAGAGGCAAATCTTCTTACCAGTTTATGGACATCTTTTCTTTTCAACGATCAACCAAATTACTGATGGAATGGTGTTCCAAGTTCCCTGATTTACTTCCCCAGACCTCATAGATTTCAGCTTAACAGCAGCTCTTCTGTAGTCCTGAGAAAGAGACTCTAGCTCTATGAGTTGAAGGAGCAATGAAGAAATAAATGGTTGAGTCGTCACTTTGCTTTCAACGAAGGCAAACCAAATACATATATTGAAACCCCTTTTCTGAAGATTTTCATGTTTAGGGCGAGGTTCTTTTGTCATCAACCAAGCAAAACAATCGAACTTTCAGAGGTTCCCTATTTTCCCAAATGCATTTCCAAGGCCAATTTTCAATGACAGCGGGATTTATCCCTGATAACAGGATTTGACCGTGAAAATTCCGTTAAGATCATATTTTCACTTTAGAGAATCAGACCGGAGTTGAAGGGTGGGGGGTGGTTCTATGGCGTCTGAGAAGCAAAAAGCACAGTTATCCAATTCCCAATCATTAATATTGAGCATGAATCTGATGTTCCAGCCTTTTTCACTCCTGTAATCTGACAGAGATGCTTCAGAATTTGGCGCCATAGTGAATAATGTTGGGTACTGGTTTTTGGAGGTTATTGCACAAGTCACATATCTATCCAAGACCTTACTTTCCAGCCATTTTCAATTACAGTTGAGGTCTTGGATAGAAAGAGTCCTACTGTGCACTCATATGCCTCCATACACCACATGAATTAGGAAAATTTGGATGTTTCGTAATCCATGGGTTGGAAAGTCTGTATTTAGCCGTAATAACATCTCTCCATAAAGCTCCCTCCTCCCTATTAAATCTCTAGAGCCGTTTGTGTTGCAAGAAAATACTATGAACCCTCAGATATTTGTTCCCCATGCCCCCAGCCTTCTTGTCAGTAGAAACCGTATCCCTTTTTGAAAGACTTGTTTTGTCTATTCCCTTGTCACAGAAAATCCCTTTACACACTATTGATTAGTACTAGCCTACCTTCCAATGAGTGATGTTATGATAACTTCCTTTTTGCACTTTTCCTCCCATCCCAGATTGTAGTGGCTTGAGACTTTGACCCCAAAGGAAGGCTGAAAGCCTAATTGTTTAATGGGAAAAGAGCCTACTCCACAACTCAAGGTGTCAGCTATTTCCTATAAGTTGATCATTTCGTTCACAGGACAAAAAACACTCTTTGTATAATTAACTTGAAGACCATAATTCGCTTTGAAGAACAAAGTACCATATGAAGTTGTACAATCTGATCATTTCAGTTTTGCAAAAAAAATAAAATAAAAAAATAGAGTGAATCATCTGCATAGAAAAGGCAAGTAAGATGCAGTTTTCCTTGATTTCTCAGACTTGGGTTAAAGCCTTTTATCTTGTCATGTAGTTTTGCTGTTGACAACATTCTTCTTAGACATAACATATCCAAGATAAACAGAAAAGGAGAAAGCGAATCTTCTTGTCTAAAACCTTTTGGTGAAGCAAAAAAGTCTTTAGGTGATCCATTTATGATAATGGATGACATGACAATGGAGATGCAAAATTGGATCCACTTGATTTATTTATTGCCGGAGCTCATGAATTTTAATATGTTGACAAGGATAGGGTGGCAATGGGGCAGGTCATGGGCGGGGCTGGGCAGGGTAAAGAATTAACTTGGCAGGGTGGGGCAATATTTAAATGGGGCAGGGCAGGACAGGTCATAGCTAATATTTTTTTAAAATTTTAATAGTGCAGGGCAGGTGTGAGTTCATGAGAGGTTCCTTAGTGTTTTGAACACTGTAGCTTGCTAGCAATGCTTAGGTTGAATCCCGAAGGAAGTTTTCCGATGTTTCTGAGCATATAATTATCCTTTATTCGGGTTATTTGATTAACAAAAAATTTAAGAATTCATTTGCGTTTTGAACACTGTAGCTTTTTACTTATATTTAACCAGTTTATCACTTTGTGTTATTTAAAAGTTAAACAGAACATTAAAAAGTGGGAAAAATAAATTAACACTTAAATGGGGCAGGGCGGGCAAAATGTTGGAAAATTCTAGGCAGAGCAGGGTAGGGCGGGTTAAATTCTTAACGGGTCAAGGCTTGCTCAGCGCTAGCCATCCCTATCGCCATCCCTGGATAAGGGATTCCAATGAACGTTGTCAAAGACTTTCTCGCTCACAGCTTAACGTGAGACGTTTAAGATAAACTGAGAAGCCTCAAAGACCCAACAAACAATTAGAAGTTGCTCCAAGTTTTCCTTCTTGGGGCATTAGATTATAATAAACATTTGGTACCAATATTCCAGGAGGTGCAGAGATATTATACCTACTGACGTAAAAGAACTTCCATCAGGAGTTTGAATCTGCTTACTCTTTTATATTTCTGATTATTCATTTGTTTATGGCCCTTCTCATTTTAGATGTGTAGTTACTGATCTTATATTTGAATATCTATGGATAAATCTTCCACATATTTAGTTAGAGCTCGATTAATTGTCCTGTTAGCATTTGTTTTTGATTCATCTTCAAATGCATAAAGTTTTTCAGTTAAACTTCTTTGAATATATGTAGTATATTATGTCTCTCCTCCCGTTTCTTCCTTACCTCAAAGCTGGATTCGCACCTTTTTGTAACCGTTCAGTTGTGAATCAAAAAAAAAAGGAAAAAATATTTCAGTTTTTCCTTTTCAATCTCTTCTCCTTCTTAAACTACTTTTATGCTCTTTAGGATGGAATGTTAAAACACAAAGATACATATGAGATTATATCTCCTGAAGATATTGGGCTTAATCGTGCTAATGAATCTGGTATTGTCCTTGGGAAACTCAGGTATGTGATTTACCAATCAATGCTTATTGCTGTGATAGCTTAAGTGTTAGATTTCTGCGCTGTTTGAGTTTTTAGTTTTTATCCCTTGATTATTGAACTTGCTTAGCAAAGTACATTCTTTTAGTTGCTATGAGGTTAGTATTTCTTTAGTACTTGAGTAAGGCTTCCCTGATCCATAGACACTCACACAGTTGCTGTTTCAAATAGTGAATCATACCTTTGTTGTTTTAAAACAGTGTGGAGGTATATAGGAACTTCCTCTCTTCTATGGAGAGGTAAAGTAGAAGCTTATTGAGTTTGCCTCACTTTAATATGGTCAGAGCCACAATTGCATGAAATAATTATCATCACAGTCTGTAACTTAATCCCTCTCGTGCCCTCCTTCCTAACCTGCTCTATTCATTATTTACATTGAATTACATCATGTCTTCAAGGAAATTGATACGTTGAACATTTTTTTTGTAGTGGGCGTCATGCTTTGCAAGCCAAAATGCTTGAGGTAAATTGCATGCTCTGAGAATTTTGTTTATTTCTTAAATTTAAGAGCACGAGACAAATCGTTTTAGTCCTATGCAGCTTGGATACGAGATTGAGGGCAAAGAACTTGATGACCTGTTCTGGCGATTCAAATCTGTGGCTGAGAAGAAAAAGGTGAATTAAGATTTTGAAATTTCCACTGTTGTTTGGTATATTTACGTCATCATTCAAATGCATTTGGAGTGGTGGAGTTTAGTAAATTTGCTACATTGAAAATTCATGGAAGGGGATTGATGGCTGGAACATTTTCTCCTTTCTAGGTAACCTAGTGACTAGAACATGAGCTAAAAATATAGTTACGATCTCTCTCTCTCTCTCTCCCTTTTCACATTCAGTAAATCTTAAGTACGTCACATCTTCAAATTTTGTGAATTTTAGTGTCTTTATTCATCTATGTATCTGGGTTGTACATTAATTTTTGTGGAGTAGGAAACAACTGGTGTGTAAGAACTTCTAAGATATTGTGAAGTGAGATGAACTAAAGTATCAGAAAAGGTGGAAGTGAGAGTAGAAACAGATAAAGAAAATTGAGCATGAATGCGAATGGAAAGATTGGGCAGAGTTCAGGATACCTTCTGAACCAAGATAATCTGTCCTATTATTACTGGTATATTATAAAGTATAAACTACAGCTTTTCTCAAGGTGGGGAAACTGTCAAATTTGTGCTAAGACCCTTTAAACCTTCTTTTGGTTGTCAAAGTTTCCTCTGCTCATTTGAAAGGGTTATTTGGCTAATTATACTTTTATCAGTTAAATTATAATTAAAATTAAGGTTAAGAACTGTGTGGATCTCATATGATATTGGTATCGTGGACATATTTTTTGGCCATCTATTTATCTCCACGCTGCTATTTCAGAAAATTACAGATGATGACCTGGTAGCACTGATGTCAGATGAGGTTTTCCAGCCTCAATTTGTGTGGCAACTTCAAAATGTACAGGTAGATATTAATGTTGACTATATCTGCACTGTTTTAACTTTGATCTGGATTAAAAAGGATGGTTCAGCTGATTGAAAGACTTCCTGCTCTATGGACAGGTTACTTCTGGAAGTCTTGGCCTTTCTACAGCAACTGTTAAGCTCATTGATGCTGATGGTCGAGAGCATATTTCTTGTTCTGTTGGAACGGGGCCAGTTGACGCGGCT</genome_strand>
        <mrna_strand>TGGAATTGGTGAAAGAGCTGGAAATGCTTCTTTAGAGGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTAATGGCCTTAAAGTGTCGTGGAGAAGCAAGTACTAGGTGGCCTATATACAGGGATTAATACACAACATATACTCATGTCAAGCAAGATG.....................................................................................GTAGAGGAGTATTTCCGGACTTCATGTGCAGCCACACAAAGCCATTGTTGGAGCTAATGCCTTTGCTCATGAAAGTGGCATCCATCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGGAATGTTANAACACAAAGATACATATGAGATTATATCTCCTGAAGATATTGNGCTTAATCGTGCTAATGAATCTGGTATTGTCCTTGGGAAACTCAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGCGTCATGCTTTGCAAGCCAAAATGCTTGAG.............................................................................CTTGGATACGAGATTGAGGGCAAAGAACTTGATGACCTGTTCTGGCGATTCAAATCTGTGGCTGAGAAG-AAAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAATTACAGATGATGACCTGGTAGCACTGATGTCAGATGANGTTTTCCAGCCTCAATTTGTGTGGCAACTTCAAAATGTACAG..................................................................................................GTTACTTCTGGAAGTCTTGGCCTTTCTACAGCAACTGTTAAGCTCATTGATGCTGATGGTCGAGAGCATATTTCTTGTTCTGTTGGAAACGGGCCAGTTGACGCGGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E417668" ref_strand="+" ref_description="SGN-E417668 [STM-25-J14]">
      <seq>ctttctactgccaacaccttagctggagcatgtgcaggtgcaagacaattggaagtgaccatcaatggaattggtgaaagagctggaaatgcttctttagaggaggttgtaatggccttaaagtgtcgtggagagcaagtactaggtggcctatatacagggattaatacacaacatatactcatgtcaagcaagaaggtagaggagtactcgggacttcatgtgcagccacacaaggccattgttggagctaatgcctttgctcatgaaagtggcatccatcaggatggaatgttaaaacacaaagatacatatgagattatatctcctgaagatattgggcttaatcgtgctaatgaatctggtattgtcctcgggaaactcagtgggcgtcatgctttgcaagctaaaatgcttgagcttggatacgaaattgagggaaaagaacttgatgacctcttctggcgattcaaatctgtggctgagaagaaaaagaaaattacagatgatgacctgatagcactgatgtcagatgaagttttccagcctcaatttgtttggcaacttcaaaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0167M06.1" temp_strand="-" temp_description="C06HBa0167M06.1  AC211057.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0167M06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="33221" stop="27308"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="32921" g_stop="32898" g_length="24"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="24" r_length="24" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="32897" i_stop="32817" i_length="81">
            <donor d_prob="0.928" d_score="0.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="32816" g_stop="32736" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="25" r_stop="105" r_length="81" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="32735" i_stop="32231" i_length="505">
            <donor d_prob="0.903" d_score="1.00"/>
            <acceptor a_prob="0.768" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="32230" g_stop="32138" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="106" r_stop="198" r_length="93" r_score="0.989"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="32137" i_stop="32053" i_length="85">
            <donor d_prob="0.851" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="32052" g_stop="31966" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="199" r_stop="285" r_length="87" r_score="0.966"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="31965" i_stop="29182" i_length="2784">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.988" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="29181" g_stop="29081" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="286" r_stop="386" r_length="101" r_score="0.990"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="29080" i_stop="28616" i_length="465">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.984" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="28615" g_stop="28582" g_length="34"/>
          <reference_exon_boundary r_type="cDNA" r_start="387" r_stop="420" r_length="34" r_score="0.971"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="28581" i_stop="28505" i_length="77">
            <donor d_prob="0.989" d_score="0.00"/>
            <acceptor a_prob="0.668" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="28504" g_stop="28430" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="421" r_stop="495" r_length="75" r_score="0.960"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="28429" i_stop="27686" i_length="744">
            <donor d_prob="0.985" d_score="0.98"/>
            <acceptor a_prob="0.924" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="27685" g_stop="27608" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="496" r_stop="573" r_length="78" r_score="0.962"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0167M06.1" gen_strand="-" ref_id="SGN-E417668" ref_strand="+">
        <total_alignment_score>0.979</total_alignment_score>
        <cumulative_length_of_scored_exons>573</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0167M06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E417668" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="32921" e_stop="32898"/>
          <exon e_start="32816" e_stop="32736"/>
          <exon e_start="32230" e_stop="32138"/>
          <exon e_start="32052" e_stop="31966"/>
          <exon e_start="29181" e_stop="29081"/>
          <exon e_start="28615" e_stop="28582"/>
          <exon e_start="28504" e_stop="28430"/>
          <exon e_start="27685" e_stop="27608"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTCTACTGCCAACACCTTAGCTGTATGTGGTTCAATGTTGATGAGAACCTAGATGTTTATGCCATCTTAAGTTGTATGCACATTAAAGCGTGTCCAATTTCAGGGAGCATGTGCAGGTGCAAGACAATTGGAAGTGACCATCAATGGAATTGGTGAAAGAGCTGGAAATGCTTCTTTAGAGGAGGTGTGTGAGGGCTTTCCGCTGAGAAATTTCAGTTCTCTTATGTGCATGATTTGGGCTCCAAAATTTGAGGGGTGGAATCACTAATTAAACAACCTTGACTATAAGTTCCCCTCTGTTCTTTCCTTGAAAAAAAGTTAGGTCTTCAAAGAAATTTCCCATAATTGCGTAAGGCATTCTCCACACAAAAGGAACTATTCCACCTCTTCCTAGAGTAAATTAACATCTTTAATTTAGACTGAATGACTGATACTAGAGTAGAAGTTGTGTGGTATGTAATATTATTCTTTTGCAAAACAATAGTTGCAAACATGCAACCGTATTTTGCCATTTTGGTCTTTGGAGCCAATTTCTGCCATTGGTTGTGTTATGTGCTGTTTAAACTGACAAACTACTGACGTTCATGAGACTCCTTTTTCCTCTGTGGTACTTGTTTGTCTTTGGTTTTCATCTTGGGCATGTCGGGCCTTCATTTTCTAACCTTTTACCATGTCCAATGCCGGAATAGGTTGTAATGGCCTTAAAGTGTCGTGGAGAGCAAGTACTAGGTGGCCTATATACAGGGATTAATACACAACATATACTCATGTCAAGCAAGATGGTTTGTACCCCTACTATCTCATAGTATGGTGATCTTTTACTGGTTAATATTCTTCCAATATGCATTCTGACCCTTTATCGTGCAGGTAGAGGAGTATTCCGGACTTCATGTGCAGCCACACAAAGCCATTGTTGGAGCTAATGCCTTTGCTCATGAAAGTGGCATCCATCAGGTTTGTGTAATTTGCTCTCGTTTATTGTTGAAAGAAACAATTCCTGAAAGAGGCAAATCTTCTTACCAGTTTATGGACATCTTTTCTTTTCAACGATCAACCAAATTACTGATGGAATGGTGTTCCAAGTTCCCTGATTTACTTCCCCAGACCTCATAGATTTCAGCTTAACAGCAGCTCTTCTGTAGTCCTGAGAAAGAGACTCTAGCTCTATGAGTTGAAGGAGCAATGAAGAAATAAATGGTTGAGTCGTCACTTTGCTTTCAACGAAGGCAAACCAAATACATATATTGAAACCCCTTTTCTGAAGATTTTCATGTTTAGGGCGAGGTTCTTTTGTCATCAACCAAGCAAAACAATCGAACTTTCAGAGGTTCCCTATTTTCCCAAATGCATTTCCAAGGCCAATTTTCAATGACAGCGGGATTTATCCCTGATAACAGGATTTGACCGTGAAAATTCCGTTAAGATCATATTTTCACTTTAGAGAATCAGACCGGAGTTGAAGGGTGGGGGGTGGTTCTATGGCGTCTGAGAAGCAAAAAGCACAGTTATCCAATTCCCAATCATTAATATTGAGCATGAATCTGATGTTCCAGCCTTTTTCACTCCTGTAATCTGACAGAGATGCTTCAGAATTTGGCGCCATAGTGAATAATGTTGGGTACTGGTTTTTGGAGGTTATTGCACAAGTCACATATCTATCCAAGACCTTACTTTCCAGCCATTTTCAATTACAGTTGAGGTCTTGGATAGAAAGAGTCCTACTGTGCACTCATATGCCTCCATACACCACATGAATTAGGAAAATTTGGATGTTTCGTAATCCATGGGTTGGAAAGTCTGTATTTAGCCGTAATAACATCTCTCCATAAAGCTCCCTCCTCCCTATTAAATCTCTAGAGCCGTTTGTGTTGCAAGAAAATACTATGAACCCTCAGATATTTGTTCCCCATGCCCCCAGCCTTCTTGTCAGTAGAAACCGTATCCCTTTTTGAAAGACTTGTTTTGTCTATTCCCTTGTCACAGAAAATCCCTTTACACACTATTGATTAGTACTAGCCTACCTTCCAATGAGTGATGTTATGATAACTTCCTTTTTGCACTTTTCCTCCCATCCCAGATTGTAGTGGCTTGAGACTTTGACCCCAAAGGAAGGCTGAAAGCCTAATTGTTTAATGGGAAAAGAGCCTACTCCACAACTCAAGGTGTCAGCTATTTCCTATAAGTTGATCATTTCGTTCACAGGACAAAAAACACTCTTTGTATAATTAACTTGAAGACCATAATTCGCTTTGAAGAACAAAGTACCATATGAAGTTGTACAATCTGATCATTTCAGTTTTGCAAAAAAAATAAAATAAAAAAATAGAGTGAATCATCTGCATAGAAAAGGCAAGTAAGATGCAGTTTTCCTTGATTTCTCAGACTTGGGTTAAAGCCTTTTATCTTGTCATGTAGTTTTGCTGTTGACAACATTCTTCTTAGACATAACATATCCAAGATAAACAGAAAAGGAGAAAGCGAATCTTCTTGTCTAAAACCTTTTGGTGAAGCAAAAAAGTCTTTAGGTGATCCATTTATGATAATGGATGACATGACAATGGAGATGCAAAATTGGATCCACTTGATTTATTTATTGCCGGAGCTCATGAATTTTAATATGTTGACAAGGATAGGGTGGCAATGGGGCAGGTCATGGGCGGGGCTGGGCAGGGTAAAGAATTAACTTGGCAGGGTGGGGCAATATTTAAATGGGGCAGGGCAGGACAGGTCATAGCTAATATTTTTTTAAAATTTTAATAGTGCAGGGCAGGTGTGAGTTCATGAGAGGTTCCTTAGTGTTTTGAACACTGTAGCTTGCTAGCAATGCTTAGGTTGAATCCCGAAGGAAGTTTTCCGATGTTTCTGAGCATATAATTATCCTTTATTCGGGTTATTTGATTAACAAAAAATTTAAGAATTCATTTGCGTTTTGAACACTGTAGCTTTTTACTTATATTTAACCAGTTTATCACTTTGTGTTATTTAAAAGTTAAACAGAACATTAAAAAGTGGGAAAAATAAATTAACACTTAAATGGGGCAGGGCGGGCAAAATGTTGGAAAATTCTAGGCAGAGCAGGGTAGGGCGGGTTAAATTCTTAACGGGTCAAGGCTTGCTCAGCGCTAGCCATCCCTATCGCCATCCCTGGATAAGGGATTCCAATGAACGTTGTCAAAGACTTTCTCGCTCACAGCTTAACGTGAGACGTTTAAGATAAACTGAGAAGCCTCAAAGACCCAACAAACAATTAGAAGTTGCTCCAAGTTTTCCTTCTTGGGGCATTAGATTATAATAAACATTTGGTACCAATATTCCAGGAGGTGCAGAGATATTATACCTACTGACGTAAAAGAACTTCCATCAGGAGTTTGAATCTGCTTACTCTTTTATATTTCTGATTATTCATTTGTTTATGGCCCTTCTCATTTTAGATGTGTAGTTACTGATCTTATATTTGAATATCTATGGATAAATCTTCCACATATTTAGTTAGAGCTCGATTAATTGTCCTGTTAGCATTTGTTTTTGATTCATCTTCAAATGCATAAAGTTTTTCAGTTAAACTTCTTTGAATATATGTAGTATATTATGTCTCTCCTCCCGTTTCTTCCTTACCTCAAAGCTGGATTCGCACCTTTTTGTAACCGTTCAGTTGTGAATCAAAAAAAAAAGGAAAAAATATTTCAGTTTTTCCTTTTCAATCTCTTCTCCTTCTTAAACTACTTTTATGCTCTTTAGGATGGAATGTTAAAACACAAAGATACATATGAGATTATATCTCCTGAAGATATTGGGCTTAATCGTGCTAATGAATCTGGTATTGTCCTTGGGAAACTCAGGTATGTGATTTACCAATCAATGCTTATTGCTGTGATAGCTTAAGTGTTAGATTTCTGCGCTGTTTGAGTTTTTAGTTTTTATCCCTTGATTATTGAACTTGCTTAGCAAAGTACATTCTTTTAGTTGCTATGAGGTTAGTATTTCTTTAGTACTTGAGTAAGGCTTCCCTGATCCATAGACACTCACACAGTTGCTGTTTCAAATAGTGAATCATACCTTTGTTGTTTTAAAACAGTGTGGAGGTATATAGGAACTTCCTCTCTTCTATGGAGAGGTAAAGTAGAAGCTTATTGAGTTTGCCTCACTTTAATATGGTCAGAGCCACAATTGCATGAAATAATTATCATCACAGTCTGTAACTTAATCCCTCTCGTGCCCTCCTTCCTAACCTGCTCTATTCATTATTTACATTGAATTACATCATGTCTTCAAGGAAATTGATACGTTGAACATTTTTTTTGTAGTGGGCGTCATGCTTTGCAAGCCAAAATGCTTGAGGTAAATTGCATGCTCTGAGAATTTTGTTTATTTCTTAAATTTAAGAGCACGAGACAAATCGTTTTAGTCCTATGCAGCTTGGATACGAGATTGAGGGCAAAGAACTTGATGACCTGTTCTGGCGATTCAAATCTGTGGCTGAGAAGAAAAAGGTGAATTAAGATTTTGAAATTTCCACTGTTGTTTGGTATATTTACGTCATCATTCAAATGCATTTGGAGTGGTGGAGTTTAGTAAATTTGCTACATTGAAAATTCATGGAAGGGGATTGATGGCTGGAACATTTTCTCCTTTCTAGGTAACCTAGTGACTAGAACATGAGCTAAAAATATAGTTACGATCTCTCTCTCTCTCTCTCCCTTTTCACATTCAGTAAATCTTAAGTACGTCACATCTTCAAATTTTGTGAATTTTAGTGTCTTTATTCATCTATGTATCTGGGTTGTACATTAATTTTTGTGGAGTAGGAAACAACTGGTGTGTAAGAACTTCTAAGATATTGTGAAGTGAGATGAACTAAAGTATCAGAAAAGGTGGAAGTGAGAGTAGAAACAGATAAAGAAAATTGAGCATGAATGCGAATGGAAAGATTGGGCAGAGTTCAGGATACCTTCTGAACCAAGATAATCTGTCCTATTATTACTGGTATATTATAAAGTATAAACTACAGCTTTTCTCAAGGTGGGGAAACTGTCAAATTTGTGCTAAGACCCTTTAAACCTTCTTTTGGTTGTCAAAGTTTCCTCTGCTCATTTGAAAGGGTTATTTGGCTAATTATACTTTTATCAGTTAAATTATAATTAAAATTAAGGTTAAGAACTGTGTGGATCTCATATGATATTGGTATCGTGGACATATTTTTTGGCCATCTATTTATCTCCACGCTGCTATTTCAGAAAATTACAGATGATGACCTGGTAGCACTGATGTCAGATGAGGTTTTCCAGCCTCAATTTGTGTGGCAACTTCAAAAT</genome_strand>
        <mrna_strand>CTTTCTACTGCCAACACCTTAGCT.................................................................................GGAGCATGTGCAGGTGCAAGACAATTGGAAGTGACCATCAATGGAATTGGTGAAAGAGCTGGAAATGCTTCTTTAGAGGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTAATGGCCTTAAAGTGTCGTGGAGAGCAAGTACTAGGTGGCCTATATACAGGGATTAATACACAACATATACTCATGTCAAGCAAGAAG.....................................................................................GTAGAGGAGTACTCGGGACTTCATGTGCAGCCACACAAGGCCATTGTTGGAGCTAATGCCTTTGCTCATGAAAGTGGCATCCATCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGGAATGTTAAAACACAAAGATACATATGAGATTATATCTCCTGAAGATATTGGGCTTAATCGTGCTAATGAATCTGGTATTGTCCTCGGGAAACTCAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGCGTCATGCTTTGCAAGCTAAAATGCTTGAG.............................................................................CTTGGATACGAAATTGAGGGAAAAGAACTTGATGACCTCTTCTGGCGATTCAAATCTGTGGCTGAGAAGAAAAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAATTACAGATGATGACCTGATAGCACTGATGTCAGATGAAGTTTTCCAGCCTCAATTTGTTTGGCAACTTCAAAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E474529" ref_strand="+" ref_description="SGN-E474529 [cSTB-36-H18]">
      <seq>caaagctggggcaacaacccttaacatccctgatactgttggatacactgtacccgaagaatttggacaattgattgctaaaataaaagccaataccccaggagttgaagatgtgatcatttcaacacactgccagaacgatcttgggctttctactgccaacaccttagctggagcatgtgcaggtgcaagacaattggaagtgaccatcaatggaattggtgaaagagctggaaatgcttctttagaggagttgtaatggccttaaagtgtcgtggagagcaagtactatgtggcctatatacagggattaatacacaacatatactcatgtcaagcaagatggtagaggagtactcgggacttcatgtgcagccacacaaggccattgttggagctaatgcctttgctcatgaaagtggcatccatcaggatggaatgctaaaacacaaagatacatatgagattatatctcctgaagatattgggcttaatcgtgctaataaatctggtattgtcctcgggaaactcagtgggcgtcatgctttgcaagctaaaatgcttgagcttggatacgaaattgagggaaaagaacttgatgacctcttatggcg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0167M06.1" temp_strand="-" temp_description="C06HBa0167M06.1  AC211057.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0167M06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="33369" stop="28158"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33069" g_stop="32898" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="172" r_length="172" r_score="0.994"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="32897" i_stop="32817" i_length="81">
            <donor d_prob="0.928" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="32816" g_stop="32736" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="173" r_stop="252" r_length="80" r_score="0.988"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="32735" i_stop="32231" i_length="505">
            <donor d_prob="0.903" d_score="0.98"/>
            <acceptor a_prob="0.768" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="32230" g_stop="32138" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="253" r_stop="345" r_length="93" r_score="0.989"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="32137" i_stop="32053" i_length="85">
            <donor d_prob="0.851" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="32052" g_stop="31966" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="346" r_stop="432" r_length="87" r_score="0.966"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="31965" i_stop="29182" i_length="2784">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.988" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="29181" g_stop="29081" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="433" r_stop="533" r_length="101" r_score="0.970"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="29080" i_stop="28616" i_length="465">
            <donor d_prob="0.999" d_score="0.96"/>
            <acceptor a_prob="0.984" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="28615" g_stop="28582" g_length="34"/>
          <reference_exon_boundary r_type="cDNA" r_start="534" r_stop="567" r_length="34" r_score="0.971"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="28581" i_stop="28505" i_length="77">
            <donor d_prob="0.989" d_score="0.00"/>
            <acceptor a_prob="0.668" a_score="0.91"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="28504" g_stop="28458" g_length="47"/>
          <reference_exon_boundary r_type="cDNA" r_start="568" r_stop="614" r_length="47" r_score="0.915"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0167M06.1" gen_strand="-" ref_id="SGN-E474529" ref_strand="+">
        <total_alignment_score>0.983</total_alignment_score>
        <cumulative_length_of_scored_exons>615</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0167M06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E474529" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33069" e_stop="32898"/>
          <exon e_start="32816" e_stop="32736"/>
          <exon e_start="32230" e_stop="32138"/>
          <exon e_start="32052" e_stop="31966"/>
          <exon e_start="29181" e_stop="29081"/>
          <exon e_start="28615" e_stop="28582"/>
          <exon e_start="28504" e_stop="28458"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAAGCTGGGGCAACAACCCTTAACATCCCTGATACTGTTGGATACACTGTACCCGAAGAATTTGGACAATTGATTGCTAAAATAAAAGCGAATACCCCAGGAGTTGAAGATGTGATCATTTCAACACACTGCCAGAACGATCTTGGGCTTTCTACTGCCAACACCTTAGCTGTATGTGGTTCAATGTTGATGAGAACCTAGATGTTTATGCCATCTTAAGTTGTATGCACATTAAAGCGTGTCCAATTTCAGGGAGCATGTGCAGGTGCAAGACAATTGGAAGTGACCATCAATGGAATTGGTGAAAGAGCTGGAAATGCTTCTTTAGAGGAGGTGTGTGAGGGCTTTCCGCTGAGAAATTTCAGTTCTCTTATGTGCATGATTTGGGCTCCAAAATTTGAGGGGTGGAATCACTAATTAAACAACCTTGACTATAAGTTCCCCTCTGTTCTTTCCTTGAAAAAAAGTTAGGTCTTCAAAGAAATTTCCCATAATTGCGTAAGGCATTCTCCACACAAAAGGAACTATTCCACCTCTTCCTAGAGTAAATTAACATCTTTAATTTAGACTGAATGACTGATACTAGAGTAGAAGTTGTGTGGTATGTAATATTATTCTTTTGCAAAACAATAGTTGCAAACATGCAACCGTATTTTGCCATTTTGGTCTTTGGAGCCAATTTCTGCCATTGGTTGTGTTATGTGCTGTTTAAACTGACAAACTACTGACGTTCATGAGACTCCTTTTTCCTCTGTGGTACTTGTTTGTCTTTGGTTTTCATCTTGGGCATGTCGGGCCTTCATTTTCTAACCTTTTACCATGTCCAATGCCGGAATAGGTTGTAATGGCCTTAAAGTGTCGTGGAGAGCAAGTACTAGGTGGCCTATATACAGGGATTAATACACAACATATACTCATGTCAAGCAAGATGGTTTGTACCCCTACTATCTCATAGTATGGTGATCTTTTACTGGTTAATATTCTTCCAATATGCATTCTGACCCTTTATCGTGCAGGTAGAGGAGTATTCCGGACTTCATGTGCAGCCACACAAAGCCATTGTTGGAGCTAATGCCTTTGCTCATGAAAGTGGCATCCATCAGGTTTGTGTAATTTGCTCTCGTTTATTGTTGAAAGAAACAATTCCTGAAAGAGGCAAATCTTCTTACCAGTTTATGGACATCTTTTCTTTTCAACGATCAACCAAATTACTGATGGAATGGTGTTCCAAGTTCCCTGATTTACTTCCCCAGACCTCATAGATTTCAGCTTAACAGCAGCTCTTCTGTAGTCCTGAGAAAGAGACTCTAGCTCTATGAGTTGAAGGAGCAATGAAGAAATAAATGGTTGAGTCGTCACTTTGCTTTCAACGAAGGCAAACCAAATACATATATTGAAACCCCTTTTCTGAAGATTTTCATGTTTAGGGCGAGGTTCTTTTGTCATCAACCAAGCAAAACAATCGAACTTTCAGAGGTTCCCTATTTTCCCAAATGCATTTCCAAGGCCAATTTTCAATGACAGCGGGATTTATCCCTGATAACAGGATTTGACCGTGAAAATTCCGTTAAGATCATATTTTCACTTTAGAGAATCAGACCGGAGTTGAAGGGTGGGGGGTGGTTCTATGGCGTCTGAGAAGCAAAAAGCACAGTTATCCAATTCCCAATCATTAATATTGAGCATGAATCTGATGTTCCAGCCTTTTTCACTCCTGTAATCTGACAGAGATGCTTCAGAATTTGGCGCCATAGTGAATAATGTTGGGTACTGGTTTTTGGAGGTTATTGCACAAGTCACATATCTATCCAAGACCTTACTTTCCAGCCATTTTCAATTACAGTTGAGGTCTTGGATAGAAAGAGTCCTACTGTGCACTCATATGCCTCCATACACCACATGAATTAGGAAAATTTGGATGTTTCGTAATCCATGGGTTGGAAAGTCTGTATTTAGCCGTAATAACATCTCTCCATAAAGCTCCCTCCTCCCTATTAAATCTCTAGAGCCGTTTGTGTTGCAAGAAAATACTATGAACCCTCAGATATTTGTTCCCCATGCCCCCAGCCTTCTTGTCAGTAGAAACCGTATCCCTTTTTGAAAGACTTGTTTTGTCTATTCCCTTGTCACAGAAAATCCCTTTACACACTATTGATTAGTACTAGCCTACCTTCCAATGAGTGATGTTATGATAACTTCCTTTTTGCACTTTTCCTCCCATCCCAGATTGTAGTGGCTTGAGACTTTGACCCCAAAGGAAGGCTGAAAGCCTAATTGTTTAATGGGAAAAGAGCCTACTCCACAACTCAAGGTGTCAGCTATTTCCTATAAGTTGATCATTTCGTTCACAGGACAAAAAACACTCTTTGTATAATTAACTTGAAGACCATAATTCGCTTTGAAGAACAAAGTACCATATGAAGTTGTACAATCTGATCATTTCAGTTTTGCAAAAAAAATAAAATAAAAAAATAGAGTGAATCATCTGCATAGAAAAGGCAAGTAAGATGCAGTTTTCCTTGATTTCTCAGACTTGGGTTAAAGCCTTTTATCTTGTCATGTAGTTTTGCTGTTGACAACATTCTTCTTAGACATAACATATCCAAGATAAACAGAAAAGGAGAAAGCGAATCTTCTTGTCTAAAACCTTTTGGTGAAGCAAAAAAGTCTTTAGGTGATCCATTTATGATAATGGATGACATGACAATGGAGATGCAAAATTGGATCCACTTGATTTATTTATTGCCGGAGCTCATGAATTTTAATATGTTGACAAGGATAGGGTGGCAATGGGGCAGGTCATGGGCGGGGCTGGGCAGGGTAAAGAATTAACTTGGCAGGGTGGGGCAATATTTAAATGGGGCAGGGCAGGACAGGTCATAGCTAATATTTTTTTAAAATTTTAATAGTGCAGGGCAGGTGTGAGTTCATGAGAGGTTCCTTAGTGTTTTGAACACTGTAGCTTGCTAGCAATGCTTAGGTTGAATCCCGAAGGAAGTTTTCCGATGTTTCTGAGCATATAATTATCCTTTATTCGGGTTATTTGATTAACAAAAAATTTAAGAATTCATTTGCGTTTTGAACACTGTAGCTTTTTACTTATATTTAACCAGTTTATCACTTTGTGTTATTTAAAAGTTAAACAGAACATTAAAAAGTGGGAAAAATAAATTAACACTTAAATGGGGCAGGGCGGGCAAAATGTTGGAAAATTCTAGGCAGAGCAGGGTAGGGCGGGTTAAATTCTTAACGGGTCAAGGCTTGCTCAGCGCTAGCCATCCCTATCGCCATCCCTGGATAAGGGATTCCAATGAACGTTGTCAAAGACTTTCTCGCTCACAGCTTAACGTGAGACGTTTAAGATAAACTGAGAAGCCTCAAAGACCCAACAAACAATTAGAAGTTGCTCCAAGTTTTCCTTCTTGGGGCATTAGATTATAATAAACATTTGGTACCAATATTCCAGGAGGTGCAGAGATATTATACCTACTGACGTAAAAGAACTTCCATCAGGAGTTTGAATCTGCTTACTCTTTTATATTTCTGATTATTCATTTGTTTATGGCCCTTCTCATTTTAGATGTGTAGTTACTGATCTTATATTTGAATATCTATGGATAAATCTTCCACATATTTAGTTAGAGCTCGATTAATTGTCCTGTTAGCATTTGTTTTTGATTCATCTTCAAATGCATAAAGTTTTTCAGTTAAACTTCTTTGAATATATGTAGTATATTATGTCTCTCCTCCCGTTTCTTCCTTACCTCAAAGCTGGATTCGCACCTTTTTGTAACCGTTCAGTTGTGAATCAAAAAAAAAAGGAAAAAATATTTCAGTTTTTCCTTTTCAATCTCTTCTCCTTCTTAAACTACTTTTATGCTCTTTAGGATGGAATGTTAAAACACAAAGATACATATGAGATTATATCTCCTGAAGATATTGGGCTTAATCGTGCTAATGAATCTGGTATTGTCCTTGGGAAACTCAGGTATGTGATTTACCAATCAATGCTTATTGCTGTGATAGCTTAAGTGTTAGATTTCTGCGCTGTTTGAGTTTTTAGTTTTTATCCCTTGATTATTGAACTTGCTTAGCAAAGTACATTCTTTTAGTTGCTATGAGGTTAGTATTTCTTTAGTACTTGAGTAAGGCTTCCCTGATCCATAGACACTCACACAGTTGCTGTTTCAAATAGTGAATCATACCTTTGTTGTTTTAAAACAGTGTGGAGGTATATAGGAACTTCCTCTCTTCTATGGAGAGGTAAAGTAGAAGCTTATTGAGTTTGCCTCACTTTAATATGGTCAGAGCCACAATTGCATGAAATAATTATCATCACAGTCTGTAACTTAATCCCTCTCGTGCCCTCCTTCCTAACCTGCTCTATTCATTATTTACATTGAATTACATCATGTCTTCAAGGAAATTGATACGTTGAACATTTTTTTTGTAGTGGGCGTCATGCTTTGCAAGCCAAAATGCTTGAGGTAAATTGCATGCTCTGAGAATTTTGTTTATTTCTTAAATTTAAGAGCACGAGACAAATCGTTTTAGTCCTATGCAGCTTGGATACGAGATTGAGGGCAAAGAACTTGATGACCTGTTCTGGCG</genome_strand>
        <mrna_strand>CAAAGCTGGGGCAACAACCCTTAACATCCCTGATACTGTTGGATACACTGTACCCGAAGAATTTGGACAATTGATTGCTAAAATAAAAGCCAATACCCCAGGAGTTGAAGATGTGATCATTTCAACACACTGCCAGAACGATCTTGGGCTTTCTACTGCCAACACCTTAGCT.................................................................................GGAGCATGTGCAGGTGCAAGACAATTGGAAGTGACCATCAATGGAATTGGTGAAAGAGCTGGAAATGCTTCTTTAGAGGA-.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTAATGGCCTTAAAGTGTCGTGGAGAGCAAGTACTATGTGGCCTATATACAGGGATTAATACACAACATATACTCATGTCAAGCAAGATG.....................................................................................GTAGAGGAGTACTCGGGACTTCATGTGCAGCCACACAAGGCCATTGTTGGAGCTAATGCCTTTGCTCATGAAAGTGGCATCCATCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGGAATGCTAAAACACAAAGATACATATGAGATTATATCTCCTGAAGATATTGGGCTTAATCGTGCTAATAAATCTGGTATTGTCCTCGGGAAACTCAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGCGTCATGCTTTGCAAGCTAAAATGCTTGAG.............................................................................CTTGGATACGAAATTGAGGGAAAAGAACTTGATGACCTCTTATGGCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E417632" ref_strand="+" ref_description="SGN-E417632 [STM-25-F14]">
      <seq>ctttctactgccaacaccttagctggagcatgtgcaggtgcaagacaattggaagtgaccatcaatggaattggtgaaagagctggaaatgcttctttagaggaggttgtaatggccttaaagtgtcgtggagagcaagtactaggtggcctatatacagggattaatacacaacatatactcatgtcaagcaagatggtagaggagtactcgggacttcatgtgcagccacacaaggccattgttggagctaatgcctttgctcatgaaagtggcatccatcaggatggaatgttaaaacacaaagatacatatgagattatatctcctgaagatattgggcttaatcgtgctaatgaatctggtattgtcctcgggaaactcagtgggcgttatgctttgcaagctaaaatgcttgagcttggatacgaaattgagggaaaagaacttgatgacc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0167M06.1" temp_strand="-" temp_description="C06HBa0167M06.1  AC211057.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0167M06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="33221" stop="28168"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="32921" g_stop="32898" g_length="24"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="24" r_length="24" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="32897" i_stop="32817" i_length="81">
            <donor d_prob="0.928" d_score="0.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="32816" g_stop="32736" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="25" r_stop="105" r_length="81" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="32735" i_stop="32231" i_length="505">
            <donor d_prob="0.903" d_score="1.00"/>
            <acceptor a_prob="0.768" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="32230" g_stop="32138" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="106" r_stop="198" r_length="93" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="32137" i_stop="32053" i_length="85">
            <donor d_prob="0.851" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="32052" g_stop="31966" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="199" r_stop="285" r_length="87" r_score="0.966"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="31965" i_stop="29182" i_length="2784">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.988" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="29181" g_stop="29081" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="286" r_stop="386" r_length="101" r_score="0.990"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="29080" i_stop="28616" i_length="465">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.984" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="28615" g_stop="28582" g_length="34"/>
          <reference_exon_boundary r_type="cDNA" r_start="387" r_stop="420" r_length="34" r_score="0.941"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="28581" i_stop="28505" i_length="77">
            <donor d_prob="0.989" d_score="0.00"/>
            <acceptor a_prob="0.668" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="28504" g_stop="28468" g_length="37"/>
          <reference_exon_boundary r_type="cDNA" r_start="421" r_stop="457" r_length="37" r_score="0.946"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0167M06.1" gen_strand="-" ref_id="SGN-E417632" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>457</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0167M06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E417632" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="32921" e_stop="32898"/>
          <exon e_start="32816" e_stop="32736"/>
          <exon e_start="32230" e_stop="32138"/>
          <exon e_start="32052" e_stop="31966"/>
          <exon e_start="29181" e_stop="29081"/>
          <exon e_start="28615" e_stop="28582"/>
          <exon e_start="28504" e_stop="28468"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTCTACTGCCAACACCTTAGCTGTATGTGGTTCAATGTTGATGAGAACCTAGATGTTTATGCCATCTTAAGTTGTATGCACATTAAAGCGTGTCCAATTTCAGGGAGCATGTGCAGGTGCAAGACAATTGGAAGTGACCATCAATGGAATTGGTGAAAGAGCTGGAAATGCTTCTTTAGAGGAGGTGTGTGAGGGCTTTCCGCTGAGAAATTTCAGTTCTCTTATGTGCATGATTTGGGCTCCAAAATTTGAGGGGTGGAATCACTAATTAAACAACCTTGACTATAAGTTCCCCTCTGTTCTTTCCTTGAAAAAAAGTTAGGTCTTCAAAGAAATTTCCCATAATTGCGTAAGGCATTCTCCACACAAAAGGAACTATTCCACCTCTTCCTAGAGTAAATTAACATCTTTAATTTAGACTGAATGACTGATACTAGAGTAGAAGTTGTGTGGTATGTAATATTATTCTTTTGCAAAACAATAGTTGCAAACATGCAACCGTATTTTGCCATTTTGGTCTTTGGAGCCAATTTCTGCCATTGGTTGTGTTATGTGCTGTTTAAACTGACAAACTACTGACGTTCATGAGACTCCTTTTTCCTCTGTGGTACTTGTTTGTCTTTGGTTTTCATCTTGGGCATGTCGGGCCTTCATTTTCTAACCTTTTACCATGTCCAATGCCGGAATAGGTTGTAATGGCCTTAAAGTGTCGTGGAGAGCAAGTACTAGGTGGCCTATATACAGGGATTAATACACAACATATACTCATGTCAAGCAAGATGGTTTGTACCCCTACTATCTCATAGTATGGTGATCTTTTACTGGTTAATATTCTTCCAATATGCATTCTGACCCTTTATCGTGCAGGTAGAGGAGTATTCCGGACTTCATGTGCAGCCACACAAAGCCATTGTTGGAGCTAATGCCTTTGCTCATGAAAGTGGCATCCATCAGGTTTGTGTAATTTGCTCTCGTTTATTGTTGAAAGAAACAATTCCTGAAAGAGGCAAATCTTCTTACCAGTTTATGGACATCTTTTCTTTTCAACGATCAACCAAATTACTGATGGAATGGTGTTCCAAGTTCCCTGATTTACTTCCCCAGACCTCATAGATTTCAGCTTAACAGCAGCTCTTCTGTAGTCCTGAGAAAGAGACTCTAGCTCTATGAGTTGAAGGAGCAATGAAGAAATAAATGGTTGAGTCGTCACTTTGCTTTCAACGAAGGCAAACCAAATACATATATTGAAACCCCTTTTCTGAAGATTTTCATGTTTAGGGCGAGGTTCTTTTGTCATCAACCAAGCAAAACAATCGAACTTTCAGAGGTTCCCTATTTTCCCAAATGCATTTCCAAGGCCAATTTTCAATGACAGCGGGATTTATCCCTGATAACAGGATTTGACCGTGAAAATTCCGTTAAGATCATATTTTCACTTTAGAGAATCAGACCGGAGTTGAAGGGTGGGGGGTGGTTCTATGGCGTCTGAGAAGCAAAAAGCACAGTTATCCAATTCCCAATCATTAATATTGAGCATGAATCTGATGTTCCAGCCTTTTTCACTCCTGTAATCTGACAGAGATGCTTCAGAATTTGGCGCCATAGTGAATAATGTTGGGTACTGGTTTTTGGAGGTTATTGCACAAGTCACATATCTATCCAAGACCTTACTTTCCAGCCATTTTCAATTACAGTTGAGGTCTTGGATAGAAAGAGTCCTACTGTGCACTCATATGCCTCCATACACCACATGAATTAGGAAAATTTGGATGTTTCGTAATCCATGGGTTGGAAAGTCTGTATTTAGCCGTAATAACATCTCTCCATAAAGCTCCCTCCTCCCTATTAAATCTCTAGAGCCGTTTGTGTTGCAAGAAAATACTATGAACCCTCAGATATTTGTTCCCCATGCCCCCAGCCTTCTTGTCAGTAGAAACCGTATCCCTTTTTGAAAGACTTGTTTTGTCTATTCCCTTGTCACAGAAAATCCCTTTACACACTATTGATTAGTACTAGCCTACCTTCCAATGAGTGATGTTATGATAACTTCCTTTTTGCACTTTTCCTCCCATCCCAGATTGTAGTGGCTTGAGACTTTGACCCCAAAGGAAGGCTGAAAGCCTAATTGTTTAATGGGAAAAGAGCCTACTCCACAACTCAAGGTGTCAGCTATTTCCTATAAGTTGATCATTTCGTTCACAGGACAAAAAACACTCTTTGTATAATTAACTTGAAGACCATAATTCGCTTTGAAGAACAAAGTACCATATGAAGTTGTACAATCTGATCATTTCAGTTTTGCAAAAAAAATAAAATAAAAAAATAGAGTGAATCATCTGCATAGAAAAGGCAAGTAAGATGCAGTTTTCCTTGATTTCTCAGACTTGGGTTAAAGCCTTTTATCTTGTCATGTAGTTTTGCTGTTGACAACATTCTTCTTAGACATAACATATCCAAGATAAACAGAAAAGGAGAAAGCGAATCTTCTTGTCTAAAACCTTTTGGTGAAGCAAAAAAGTCTTTAGGTGATCCATTTATGATAATGGATGACATGACAATGGAGATGCAAAATTGGATCCACTTGATTTATTTATTGCCGGAGCTCATGAATTTTAATATGTTGACAAGGATAGGGTGGCAATGGGGCAGGTCATGGGCGGGGCTGGGCAGGGTAAAGAATTAACTTGGCAGGGTGGGGCAATATTTAAATGGGGCAGGGCAGGACAGGTCATAGCTAATATTTTTTTAAAATTTTAATAGTGCAGGGCAGGTGTGAGTTCATGAGAGGTTCCTTAGTGTTTTGAACACTGTAGCTTGCTAGCAATGCTTAGGTTGAATCCCGAAGGAAGTTTTCCGATGTTTCTGAGCATATAATTATCCTTTATTCGGGTTATTTGATTAACAAAAAATTTAAGAATTCATTTGCGTTTTGAACACTGTAGCTTTTTACTTATATTTAACCAGTTTATCACTTTGTGTTATTTAAAAGTTAAACAGAACATTAAAAAGTGGGAAAAATAAATTAACACTTAAATGGGGCAGGGCGGGCAAAATGTTGGAAAATTCTAGGCAGAGCAGGGTAGGGCGGGTTAAATTCTTAACGGGTCAAGGCTTGCTCAGCGCTAGCCATCCCTATCGCCATCCCTGGATAAGGGATTCCAATGAACGTTGTCAAAGACTTTCTCGCTCACAGCTTAACGTGAGACGTTTAAGATAAACTGAGAAGCCTCAAAGACCCAACAAACAATTAGAAGTTGCTCCAAGTTTTCCTTCTTGGGGCATTAGATTATAATAAACATTTGGTACCAATATTCCAGGAGGTGCAGAGATATTATACCTACTGACGTAAAAGAACTTCCATCAGGAGTTTGAATCTGCTTACTCTTTTATATTTCTGATTATTCATTTGTTTATGGCCCTTCTCATTTTAGATGTGTAGTTACTGATCTTATATTTGAATATCTATGGATAAATCTTCCACATATTTAGTTAGAGCTCGATTAATTGTCCTGTTAGCATTTGTTTTTGATTCATCTTCAAATGCATAAAGTTTTTCAGTTAAACTTCTTTGAATATATGTAGTATATTATGTCTCTCCTCCCGTTTCTTCCTTACCTCAAAGCTGGATTCGCACCTTTTTGTAACCGTTCAGTTGTGAATCAAAAAAAAAAGGAAAAAATATTTCAGTTTTTCCTTTTCAATCTCTTCTCCTTCTTAAACTACTTTTATGCTCTTTAGGATGGAATGTTAAAACACAAAGATACATATGAGATTATATCTCCTGAAGATATTGGGCTTAATCGTGCTAATGAATCTGGTATTGTCCTTGGGAAACTCAGGTATGTGATTTACCAATCAATGCTTATTGCTGTGATAGCTTAAGTGTTAGATTTCTGCGCTGTTTGAGTTTTTAGTTTTTATCCCTTGATTATTGAACTTGCTTAGCAAAGTACATTCTTTTAGTTGCTATGAGGTTAGTATTTCTTTAGTACTTGAGTAAGGCTTCCCTGATCCATAGACACTCACACAGTTGCTGTTTCAAATAGTGAATCATACCTTTGTTGTTTTAAAACAGTGTGGAGGTATATAGGAACTTCCTCTCTTCTATGGAGAGGTAAAGTAGAAGCTTATTGAGTTTGCCTCACTTTAATATGGTCAGAGCCACAATTGCATGAAATAATTATCATCACAGTCTGTAACTTAATCCCTCTCGTGCCCTCCTTCCTAACCTGCTCTATTCATTATTTACATTGAATTACATCATGTCTTCAAGGAAATTGATACGTTGAACATTTTTTTTGTAGTGGGCGTCATGCTTTGCAAGCCAAAATGCTTGAGGTAAATTGCATGCTCTGAGAATTTTGTTTATTTCTTAAATTTAAGAGCACGAGACAAATCGTTTTAGTCCTATGCAGCTTGGATACGAGATTGAGGGCAAAGAACTTGATGACC</genome_strand>
        <mrna_strand>CTTTCTACTGCCAACACCTTAGCT.................................................................................GGAGCATGTGCAGGTGCAAGACAATTGGAAGTGACCATCAATGGAATTGGTGAAAGAGCTGGAAATGCTTCTTTAGAGGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTAATGGCCTTAAAGTGTCGTGGAGAGCAAGTACTAGGTGGCCTATATACAGGGATTAATACACAACATATACTCATGTCAAGCAAGATG.....................................................................................GTAGAGGAGTACTCGGGACTTCATGTGCAGCCACACAAGGCCATTGTTGGAGCTAATGCCTTTGCTCATGAAAGTGGCATCCATCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGGAATGTTAAAACACAAAGATACATATGAGATTATATCTCCTGAAGATATTGGGCTTAATCGTGCTAATGAATCTGGTATTGTCCTCGGGAAACTCAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGCGTTATGCTTTGCAAGCTAAAATGCTTGAG.............................................................................CTTGGATACGAAATTGAGGGAAAAGAACTTGATGACC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E474314" ref_strand="+" ref_description="SGN-E474314 [cSTB-36-I19]">
      <seq>caaagctggggcaacaacccttaacatccctgatactgttggatacactgtacccgaagaatttggacaattgattgctaaaataaaagccaataccccaggagttgaagatgtgatcatttcaacacactgccagaacgatcttgggctttctactgccaacaccttatctggagcatgtgcaggtgcaagacaattggaagtgaccatcaatggaattggtgaaagagctggaaatgcttctttagaggagttgtaatggccttaaagtgtcgtggagagcaagta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0167M06.1" temp_strand="-" temp_description="C06HBa0167M06.1  AC211057.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0167M06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="33369" stop="31895"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33069" g_stop="32898" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="172" r_length="172" r_score="0.988"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="32897" i_stop="32817" i_length="81">
            <donor d_prob="0.928" d_score="0.98"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="32816" g_stop="32736" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="173" r_stop="252" r_length="80" r_score="0.988"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="32735" i_stop="32231" i_length="505">
            <donor d_prob="0.903" d_score="0.98"/>
            <acceptor a_prob="0.768" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="32230" g_stop="32195" g_length="36"/>
          <reference_exon_boundary r_type="cDNA" r_start="253" r_stop="288" r_length="36" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0167M06.1" gen_strand="-" ref_id="SGN-E474314" ref_strand="+">
        <total_alignment_score>0.988</total_alignment_score>
        <cumulative_length_of_scored_exons>289</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0167M06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E474314" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33069" e_stop="32898"/>
          <exon e_start="32816" e_stop="32736"/>
          <exon e_start="32230" e_stop="32195"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAAGCTGGGGCAACAACCCTTAACATCCCTGATACTGTTGGATACACTGTACCCGAAGAATTTGGACAATTGATTGCTAAAATAAAAGCGAATACCCCAGGAGTTGAAGATGTGATCATTTCAACACACTGCCAGAACGATCTTGGGCTTTCTACTGCCAACACCTTAGCTGTATGTGGTTCAATGTTGATGAGAACCTAGATGTTTATGCCATCTTAAGTTGTATGCACATTAAAGCGTGTCCAATTTCAGGGAGCATGTGCAGGTGCAAGACAATTGGAAGTGACCATCAATGGAATTGGTGAAAGAGCTGGAAATGCTTCTTTAGAGGAGGTGTGTGAGGGCTTTCCGCTGAGAAATTTCAGTTCTCTTATGTGCATGATTTGGGCTCCAAAATTTGAGGGGTGGAATCACTAATTAAACAACCTTGACTATAAGTTCCCCTCTGTTCTTTCCTTGAAAAAAAGTTAGGTCTTCAAAGAAATTTCCCATAATTGCGTAAGGCATTCTCCACACAAAAGGAACTATTCCACCTCTTCCTAGAGTAAATTAACATCTTTAATTTAGACTGAATGACTGATACTAGAGTAGAAGTTGTGTGGTATGTAATATTATTCTTTTGCAAAACAATAGTTGCAAACATGCAACCGTATTTTGCCATTTTGGTCTTTGGAGCCAATTTCTGCCATTGGTTGTGTTATGTGCTGTTTAAACTGACAAACTACTGACGTTCATGAGACTCCTTTTTCCTCTGTGGTACTTGTTTGTCTTTGGTTTTCATCTTGGGCATGTCGGGCCTTCATTTTCTAACCTTTTACCATGTCCAATGCCGGAATAGGTTGTAATGGCCTTAAAGTGTCGTGGAGAGCAAGTA</genome_strand>
        <mrna_strand>CAAAGCTGGGGCAACAACCCTTAACATCCCTGATACTGTTGGATACACTGTACCCGAAGAATTTGGACAATTGATTGCTAAAATAAAAGCCAATACCCCAGGAGTTGAAGATGTGATCATTTCAACACACTGCCAGAACGATCTTGGGCTTTCTACTGCCAACACCTTATCT.................................................................................GGAGCATGTGCAGGTGCAAGACAATTGGAAGTGACCATCAATGGAATTGGTGAAAGAGCTGGAAATGCTTCTTTAGAGGA-.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTAATGGCCTTAAAGTGTCGTGGAGAGCAAGTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E407124" ref_strand="+" ref_description="SGN-E407124 [PPI-6-G9]">
      <seq>cgcaaatcatccaatttccggtaacccattaatctcattccgtcccaaaaacccttttcttcaaacccaaactctcttcaatttcaaaccatcaaaccccaaacactccaattcctcattttccattcccattgtccgctgctcaatacgccgtcgaccggaatatactccgaatcacattcccgatccaaactacgtccgcatattcgacaccactctccgtgatggcgaacaatcaccaggggctacaatgactacaaaggagaaactggatgttgcacgtcagttagctaagcttggtgtcgatataattgaggctggttttcctgcttcttctgaagctgatcttgaggctgtaaaattgatagctaaggaagttgggaatggtgtttatgaagagggacatgttccggttatttgtggattggcgaggtgtaataagaaggatattgataaggcgtgggaggctgtgaagtatgctaagaaaccgaggattcatacgtttattgctacaagtgagatacatatgaattataagctgaaaatgagtagagttcaagttgttgagaaagctaggagtatggtggcttatgcaaggagtattgggtgtgaggatgttgaatttagccctgaagatgctggaagatctgatccagagtttctttatcatatccttgggagagttatcaaagctggggcaacaacccttaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0167M06.1" temp_strand="-" temp_description="C06HBa0167M06.1  AC211057.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0167M06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="35033" stop="32746"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34733" g_stop="34089" g_length="645"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="645" r_length="645" r_score="0.972"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="34088" i_stop="33112" i_length="977">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="33111" g_stop="33046" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="646" r_stop="711" r_length="66" r_score="0.939"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0167M06.1" gen_strand="-" ref_id="SGN-E407124" ref_strand="+">
        <total_alignment_score>0.969</total_alignment_score>
        <cumulative_length_of_scored_exons>711</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0167M06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E407124" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34733" e_stop="34089"/>
          <exon e_start="33111" e_stop="33046"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGCAAATCATCCAATCTCCGGTAAACCATTAATCTCATTCCGTCCCAAAAACCCTTTACTTCAAACCCAAACTCTCTTCAATTTCAAACCATCAATCTCCAAGCACTCCAATTCTTCATTTTCCATTCCCGTTGTCCGCTGCTCAATCCGCCGTAGACCGGAATATACTCCGAGTCACATTCCCGATCCAAACTATGTCCGGATATTCGACACCACTCTCCGTGATGGCGAACAATCACCAGGGGCTACAATGACTACAAAGGAGAAACTGGATGTTGCACGTCAGTTAGCTAAGCTTGGTGTTGATATAATTGAGGCTGGTTTTCCTGCTTCTTCTGAAGCTGATCTTGAAGCTGTGAAATTGATAGCTAAGGAAGTTGGGAATGGTGTTTATGAAGAGGGATATGTTCCGGTTATTTGTGGATTGGCGAGGTGTAATAAGAAGGATATTGATAAGGCGTGGGAGGCTGTGAAGTATGCTAAGAAACCGAGGATTCATACGTTTATTGCTACAAGTGAGATACATATGAATTATAAGCTGAAAATGAGTAGAGATCAAGTTGTTGAGAAAGCTAGGAGTATGGTGGCTTATGCAAGGAGTATTGGGTGTGAGGATGTTGAATTTAGCCCTGAAGATGCTGGAAGGTTTGGACTTTTACGCCTACACATTAAAAACTTCCAAAATTTCATTTCTATACATTTTTACAACTTTCAAAAATGTAAAGTTATTCAAAATTTGAACTTTGATGTGTTGACTGGACTCTTTACCATCACTTTGCTATTTTTTCATTTTCAGTAGTTTAATATAAAATTGATAATATAATATTTATGTTAATTAGCATCTAAACTTTTCGTTCTCCCATCACATAGCATTATATACTTGCTTTGAGCTATCATCATTGATAGAATTGTTGATTCTGGGACTTTTTCTTCTTGAATGGAGATAATTATTGAGTTTAGGCTAGCTATCCACAAAGTTGCCAATGGGGGACTAAGGAATAGATTGGACTTATTTCCTTGTTTCTTTTTTGGATTAATCATGCTCGTTATGGTCTTATATGTTGAACTGATAGTTGTATGCAGATAGTGTTATATAAATTCAGATGTTTATTTAAAAGTGTCTCGTAATTTAGCTGGCGAATGATCCTGAAAAATCCTGAAAAGTTTCTGGAGAAAATTTCATCAAGAGTCTGTTAACACCAAACTTGTCTTATTAAACAGACATGTTTATGGCATTCTTTTTAACAAGCGCATGGGAGACCTTGAAATTATGACTCTTTTCCCTTTCAACCGAACACTTAAAAGATAATAAGACCTTGTGTACTGTAATTTGCCTTTTCCTATCAAGAAGTTCTTTGGTATGATGCTTTGAGATCTCAAAGAAGAGGGTTAAACTACCATGTTTTATTCTGTTGCCATGTATAAAAGTTTGTAGACTAGCTCAGTGATTAGAATCGACAATGGGAACCACTTTCATGCATTGTGCTAACTGGGATCTGTTCTTTTTGCTGATCTGAGCCTTGTTTTCCTGTTTATTTGCACTACCTCCTTGGTACTAGCTTTAATAATATTAATTTACTTTATGAAAAAAAAAAAACTTATTTCCTGTTTTTTCCTCTCAGATCTGATCCAGAGTTTCTTTATCATATCCTTGGAGAGGTTATCAAAGCTGGGGCAACAACCCTTAA</genome_strand>
        <mrna_strand>CGCAAATCATCCAATTTCCGGTAACCCATTAATCTCATTCCGTCCCAAAAACCCTTTTCTTCAAACCCAAACTCTCTTCAATTTCAAACCATCAAACCCCAAACACTCCAATTCCTCATTTTCCATTCCCATTGTCCGCTGCTCAATACGCCGTCGACCGGAATATACTCCGAATCACATTCCCGATCCAAACTACGTCCGCATATTCGACACCACTCTCCGTGATGGCGAACAATCACCAGGGGCTACAATGACTACAAAGGAGAAACTGGATGTTGCACGTCAGTTAGCTAAGCTTGGTGTCGATATAATTGAGGCTGGTTTTCCTGCTTCTTCTGAAGCTGATCTTGAGGCTGTAAAATTGATAGCTAAGGAAGTTGGGAATGGTGTTTATGAAGAGGGACATGTTCCGGTTATTTGTGGATTGGCGAGGTGTAATAAGAAGGATATTGATAAGGCGTGGGAGGCTGTGAAGTATGCTAAGAAACCGAGGATTCATACGTTTATTGCTACAAGTGAGATACATATGAATTATAAGCTGAAAATGAGTAGAGTTCAAGTTGTTGAGAAAGCTAGGAGTATGGTGGCTTATGCAAGGAGTATTGGGTGTGAGGATGTTGAATTTAGCCCTGAAGATGCTGGAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTGATCCAGAGTTTCTTTATCATATCCTTGGGAGAGTTATCAAAGCTGGGGCAACAACCCTTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E317994" ref_strand="+" ref_description="SGN-E317994 [cTOA-30-L17]">
      <seq>ttaaaaccagcactcgcaaactccaatttctcttctccggcaatggcgtctatcaccgcaaatcatccaatctccggtaaaccattaatctcattccgtcccaaaaaccctttacttcaaacccaaactctcttcaatttcaaaccatcaatctccaagcactccaattcttcattttccattcccgttgtccgctgctcaatccgccgtagaccggaatatactccgagtcacattcccgatccaaactatgtccggatattcgacaccactctccgtgatggcgaacaatcaccaggggctacaatgactacaaaggagaaactggatgttgcacgtcagttagctaagcttggtgttgatataattgaggctggttttcctgcttcttctgaagctgatcttgaagctgtgaaattgatagctaaggaagttgggaatggtgtttatgaagagggatatgttccggttatttgtggattggcgaggtgtaataagaaggatattgataaggcgtgggaggctgtgaagtatgctaagaaaccgaggattcatacgtttattgctacaagtgagatacatatgaattataagctgaaaatgagtagagatcaagttgttgagaaagctangagtatggtggcttatgcaagg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0167M06.1" temp_strand="-" temp_description="C06HBa0167M06.1  AC211057.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0167M06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="35089" stop="33836"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34789" g_stop="34136" g_length="654"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="654" r_length="654" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0167M06.1" gen_strand="-" ref_id="SGN-E317994" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>654</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0167M06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E317994" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34789" e_stop="34136"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTAAAACCAGCACTCGCAAACTCCAATTTCTCTTCTCCGGCAATGGCGTCTATCACCGCAAATCATCCAATCTCCGGTAAACCATTAATCTCATTCCGTCCCAAAAACCCTTTACTTCAAACCCAAACTCTCTTCAATTTCAAACCATCAATCTCCAAGCACTCCAATTCTTCATTTTCCATTCCCGTTGTCCGCTGCTCAATCCGCCGTAGACCGGAATATACTCCGAGTCACATTCCCGATCCAAACTATGTCCGGATATTCGACACCACTCTCCGTGATGGCGAACAATCACCAGGGGCTACAATGACTACAAAGGAGAAACTGGATGTTGCACGTCAGTTAGCTAAGCTTGGTGTTGATATAATTGAGGCTGGTTTTCCTGCTTCTTCTGAAGCTGATCTTGAAGCTGTGAAATTGATAGCTAAGGAAGTTGGGAATGGTGTTTATGAAGAGGGATATGTTCCGGTTATTTGTGGATTGGCGAGGTGTAATAAGAAGGATATTGATAAGGCGTGGGAGGCTGTGAAGTATGCTAAGAAACCGAGGATTCATACGTTTATTGCTACAAGTGAGATACATATGAATTATAAGCTGAAAATGAGTAGAGATCAAGTTGTTGAGAAAGCTAGGAGTATGGTGGCTTATGCAAGG</genome_strand>
        <mrna_strand>TTAAAACCAGCACTCGCAAACTCCAATTTCTCTTCTCCGGCAATGGCGTCTATCACCGCAAATCATCCAATCTCCGGTAAACCATTAATCTCATTCCGTCCCAAAAACCCTTTACTTCAAACCCAAACTCTCTTCAATTTCAAACCATCAATCTCCAAGCACTCCAATTCTTCATTTTCCATTCCCGTTGTCCGCTGCTCAATCCGCCGTAGACCGGAATATACTCCGAGTCACATTCCCGATCCAAACTATGTCCGGATATTCGACACCACTCTCCGTGATGGCGAACAATCACCAGGGGCTACAATGACTACAAAGGAGAAACTGGATGTTGCACGTCAGTTAGCTAAGCTTGGTGTTGATATAATTGAGGCTGGTTTTCCTGCTTCTTCTGAAGCTGATCTTGAAGCTGTGAAATTGATAGCTAAGGAAGTTGGGAATGGTGTTTATGAAGAGGGATATGTTCCGGTTATTTGTGGATTGGCGAGGTGTAATAAGAAGGATATTGATAAGGCGTGGGAGGCTGTGAAGTATGCTAAGAAACCGAGGATTCATACGTTTATTGCTACAAGTGAGATACATATGAATTATAAGCTGAAAATGAGTAGAGATCAAGTTGTTGAGAAAGCTANGAGTATGGTGGCTTATGCAAGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E314837" ref_strand="+" ref_description="SGN-E314837 [cTOA-20-H12]">
      <seq>ccattaaaaccagcactcgcaaactccaatttctcttctccggcaatggcgtctatcaccgcaaatcatccaatctccggtaaaccattaatctcattccgtcccaaaaaccctttacttcaaacccaaactctcttcaatttcaaaccatcaatctccaagcactccaattcttcattttccattcccgttgtccgctgctcaatccgccgtagaccggaatatactccgagtcacattcccgatccaaactatgtccggatattcgacaccactctccgtgatggcgaacaatcaccaggggctacaatgactacaaaggagaaactggatgttgcacgtcagttagctaagcttggtgttgatataattgaggctggttttcctgcttcttctgaagctgatcttgaagctgtgaaattgatagctaaggaagttgggaatggtgtttatgaagagggatatgttccggttatttgtggattggcgaggtgtaataagaaggatattgataaggcgtgggaggctgtgaagtatgctaagaaaccgaggattcatacgtttattgctacaagtgagatacatatgaattataagctgaaaatgagtagagatcaagttgttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0167M06.1" temp_strand="-" temp_description="C06HBa0167M06.1  AC211057.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0167M06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="35092" stop="33868"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34792" g_stop="34168" g_length="625"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="625" r_length="625" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0167M06.1" gen_strand="-" ref_id="SGN-E314837" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>625</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0167M06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E314837" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34792" e_stop="34168"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCATTAAAACCAGCACTCGCAAACTCCAATTTCTCTTCTCCGGCAATGGCGTCTATCACCGCAAATCATCCAATCTCCGGTAAACCATTAATCTCATTCCGTCCCAAAAACCCTTTACTTCAAACCCAAACTCTCTTCAATTTCAAACCATCAATCTCCAAGCACTCCAATTCTTCATTTTCCATTCCCGTTGTCCGCTGCTCAATCCGCCGTAGACCGGAATATACTCCGAGTCACATTCCCGATCCAAACTATGTCCGGATATTCGACACCACTCTCCGTGATGGCGAACAATCACCAGGGGCTACAATGACTACAAAGGAGAAACTGGATGTTGCACGTCAGTTAGCTAAGCTTGGTGTTGATATAATTGAGGCTGGTTTTCCTGCTTCTTCTGAAGCTGATCTTGAAGCTGTGAAATTGATAGCTAAGGAAGTTGGGAATGGTGTTTATGAAGAGGGATATGTTCCGGTTATTTGTGGATTGGCGAGGTGTAATAAGAAGGATATTGATAAGGCGTGGGAGGCTGTGAAGTATGCTAAGAAACCGAGGATTCATACGTTTATTGCTACAAGTGAGATACATATGAATTATAAGCTGAAAATGAGTAGAGATCAAGTTGTTG</genome_strand>
        <mrna_strand>CCATTAAAACCAGCACTCGCAAACTCCAATTTCTCTTCTCCGGCAATGGCGTCTATCACCGCAAATCATCCAATCTCCGGTAAACCATTAATCTCATTCCGTCCCAAAAACCCTTTACTTCAAACCCAAACTCTCTTCAATTTCAAACCATCAATCTCCAAGCACTCCAATTCTTCATTTTCCATTCCCGTTGTCCGCTGCTCAATCCGCCGTAGACCGGAATATACTCCGAGTCACATTCCCGATCCAAACTATGTCCGGATATTCGACACCACTCTCCGTGATGGCGAACAATCACCAGGGGCTACAATGACTACAAAGGAGAAACTGGATGTTGCACGTCAGTTAGCTAAGCTTGGTGTTGATATAATTGAGGCTGGTTTTCCTGCTTCTTCTGAAGCTGATCTTGAAGCTGTGAAATTGATAGCTAAGGAAGTTGGGAATGGTGTTTATGAAGAGGGATATGTTCCGGTTATTTGTGGATTGGCGAGGTGTAATAAGAAGGATATTGATAAGGCGTGGGAGGCTGTGAAGTATGCTAAGAAACCGAGGATTCATACGTTTATTGCTACAAGTGAGATACATATGAATTATAAGCTGAAAATGAGTAGAGATCAAGTTGTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E487994" ref_strand="+" ref_description="SGN-E487994 [cSTE-27-M11]">
      <seq>aaaaccagcacttgcaaactccaatttctcttctccggcaatggcgtctatcaccgcaaatcatccaatttccggtaacccattaatctcattccgtcccaaaaacccttttcttcaaacccaaactctcttcaatttcaaaccatcaaaccccaaacactccaattcctcattttccgttcccattgtccgctgctcaatacgccgtcgaccggaatatactccgaatcacattcccgatccaaactacgtccgcatattcgacaccactctccgtgatggcgaacaatcaccaggggctacaatgactacaaaggagaaactggatgttgcacgtcagttagctaagcttggtgtcgatataattgaggctggttttcctgcttcttctgaagctgatcttgaggctgtaaaattgatagctaaggaagttgggaatggtgtttatgaagagggacatgttccggttatttgtggattggcgaggtgtaataagaaggatattgataaggcgtgggaggctgtgaagtatgctgagaaaccgaggaatcatacgtttattgctacaagtgagatacatatgaattataagctgaaaatgagtagagatcaagttgttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0167M06.1" temp_strand="-" temp_description="C06HBa0167M06.1  AC211057.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0167M06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="35087" stop="33868"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34787" g_stop="34168" g_length="620"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="620" r_length="620" r_score="0.966"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0167M06.1" gen_strand="-" ref_id="SGN-E487994" ref_strand="+">
        <total_alignment_score>0.966</total_alignment_score>
        <cumulative_length_of_scored_exons>620</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0167M06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E487994" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34787" e_stop="34168"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAACCAGCACTCGCAAACTCCAATTTCTCTTCTCCGGCAATGGCGTCTATCACCGCAAATCATCCAATCTCCGGTAAACCATTAATCTCATTCCGTCCCAAAAACCCTTTACTTCAAACCCAAACTCTCTTCAATTTCAAACCATCAATCTCCAAGCACTCCAATTCTTCATTTTCCATTCCCGTTGTCCGCTGCTCAATCCGCCGTAGACCGGAATATACTCCGAGTCACATTCCCGATCCAAACTATGTCCGGATATTCGACACCACTCTCCGTGATGGCGAACAATCACCAGGGGCTACAATGACTACAAAGGAGAAACTGGATGTTGCACGTCAGTTAGCTAAGCTTGGTGTTGATATAATTGAGGCTGGTTTTCCTGCTTCTTCTGAAGCTGATCTTGAAGCTGTGAAATTGATAGCTAAGGAAGTTGGGAATGGTGTTTATGAAGAGGGATATGTTCCGGTTATTTGTGGATTGGCGAGGTGTAATAAGAAGGATATTGATAAGGCGTGGGAGGCTGTGAAGTATGCTAAGAAACCGAGGATTCATACGTTTATTGCTACAAGTGAGATACATATGAATTATAAGCTGAAAATGAGTAGAGATCAAGTTGTTG</genome_strand>
        <mrna_strand>AAAACCAGCACTTGCAAACTCCAATTTCTCTTCTCCGGCAATGGCGTCTATCACCGCAAATCATCCAATTTCCGGTAACCCATTAATCTCATTCCGTCCCAAAAACCCTTTTCTTCAAACCCAAACTCTCTTCAATTTCAAACCATCAAACCCCAAACACTCCAATTCCTCATTTTCCGTTCCCATTGTCCGCTGCTCAATACGCCGTCGACCGGAATATACTCCGAATCACATTCCCGATCCAAACTACGTCCGCATATTCGACACCACTCTCCGTGATGGCGAACAATCACCAGGGGCTACAATGACTACAAAGGAGAAACTGGATGTTGCACGTCAGTTAGCTAAGCTTGGTGTCGATATAATTGAGGCTGGTTTTCCTGCTTCTTCTGAAGCTGATCTTGAGGCTGTAAAATTGATAGCTAAGGAAGTTGGGAATGGTGTTTATGAAGAGGGACATGTTCCGGTTATTTGTGGATTGGCGAGGTGTAATAAGAAGGATATTGATAAGGCGTGGGAGGCTGTGAAGTATGCTGAGAAACCGAGGAATCATACGTTTATTGCTACAAGTGAGATACATATGAATTATAAGCTGAAAATGAGTAGAGATCAAGTTGTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E210230" ref_strand="+" ref_description="SGN-E210230 [cLEC-40-F8]">
      <seq>actcgcaaactccaatttctcttctccggcaatggcgtctatcaccgcaaatcatccaatctccggtaaaccattaatctcattccgtcccaaaaaccctttacttcaaacccaaactctcttcaatttcaaaccatcaatctccaagcactccaattcttcattttccattcccgttgtccgctgctcaatccgccgtagaccggaatatactccgagtcacattcccgatccaaactatgtccggatattcgacaccactctccgtgatggcgaacaatcaccaggggctacaatgactacaaaggagaaactggatgttgcacgtcagttagctaagcttggtgttgatataattgaggctggttttcctgcttcttctgaagctgatcttgaagctgtgaaattgatagctaaggaagttgggaatggtgtttatgaagagggatatgttccggttatttgtggattggcgaggtgtaataagaaggatattgataaggcgtgggaggctgtgaagtatgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0167M06.1" temp_strand="-" temp_description="C06HBa0167M06.1  AC211057.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0167M06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="35078" stop="33954"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34778" g_stop="34254" g_length="525"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="525" r_length="525" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0167M06.1" gen_strand="-" ref_id="SGN-E210230" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>525</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0167M06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E210230" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34778" e_stop="34254"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACTCGCAAACTCCAATTTCTCTTCTCCGGCAATGGCGTCTATCACCGCAAATCATCCAATCTCCGGTAAACCATTAATCTCATTCCGTCCCAAAAACCCTTTACTTCAAACCCAAACTCTCTTCAATTTCAAACCATCAATCTCCAAGCACTCCAATTCTTCATTTTCCATTCCCGTTGTCCGCTGCTCAATCCGCCGTAGACCGGAATATACTCCGAGTCACATTCCCGATCCAAACTATGTCCGGATATTCGACACCACTCTCCGTGATGGCGAACAATCACCAGGGGCTACAATGACTACAAAGGAGAAACTGGATGTTGCACGTCAGTTAGCTAAGCTTGGTGTTGATATAATTGAGGCTGGTTTTCCTGCTTCTTCTGAAGCTGATCTTGAAGCTGTGAAATTGATAGCTAAGGAAGTTGGGAATGGTGTTTATGAAGAGGGATATGTTCCGGTTATTTGTGGATTGGCGAGGTGTAATAAGAAGGATATTGATAAGGCGTGGGAGGCTGTGAAGTATGC</genome_strand>
        <mrna_strand>ACTCGCAAACTCCAATTTCTCTTCTCCGGCAATGGCGTCTATCACCGCAAATCATCCAATCTCCGGTAAACCATTAATCTCATTCCGTCCCAAAAACCCTTTACTTCAAACCCAAACTCTCTTCAATTTCAAACCATCAATCTCCAAGCACTCCAATTCTTCATTTTCCATTCCCGTTGTCCGCTGCTCAATCCGCCGTAGACCGGAATATACTCCGAGTCACATTCCCGATCCAAACTATGTCCGGATATTCGACACCACTCTCCGTGATGGCGAACAATCACCAGGGGCTACAATGACTACAAAGGAGAAACTGGATGTTGCACGTCAGTTAGCTAAGCTTGGTGTTGATATAATTGAGGCTGGTTTTCCTGCTTCTTCTGAAGCTGATCTTGAAGCTGTGAAATTGATAGCTAAGGAAGTTGGGAATGGTGTTTATGAAGAGGGATATGTTCCGGTTATTTGTGGATTGGCGAGGTGTAATAAGAAGGATATTGATAAGGCGTGGGAGGCTGTGAAGTATGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E719295" ref_strand="+" ref_description="SGN-E719295 [FC07BF09]">
      <seq>gagtcccgacaagagcccacaattgtaatttttgcatttgcttgcgtatgtcactcccgaggagcctcgactcttcttcacaagcgaaacaactaaaacccctctttctaattacattgattttctagcaacatttcctcaagaaatctgtaagtattcatacattcaattttgcttgtttttagatttggggtaccatcaaattctctaaatttattgaaatttgatagcttgattgatcttcgtacaaagtattcttagttgtattggatctgaataggattgcaatcaagaaattctgaagttgggtttgctgatttgggtctttatgtgatttgacgttcaataaattagtctgaagtgcaagattcttgattttctgatttggggttttctatatctgtttcaagattcaatttttctgaggattctgtattgaatttgattaatgacattacaagaaggttaaataaaggggaggaagtagtgtatttgtaagcattttagcaataaagttgaagaaggaattgtgagtaactgagggggttaaaggtttcttcacatggggaaaccattgttttatgagatattggagaagccagcaaccagttgtgcaattggaatatgtagtgcaatttggttttatattcagaagtcaaatattggttattcacatgttggtttgagttatgaaactgctttggagggtcattattggaggataataacatcaacactttcacatataaatgtgcttcaccttgttttcaatatgagtgcactttggagtcttggagttgtgaaaaaattggggcatttaggtct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0167M06.1" temp_strand="+" temp_description="C06HBa0167M06.1  AC211057.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0167M06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="52478" stop="53901"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="52777" g_stop="53601" g_length="825"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="825" r_length="825" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0167M06.1" gen_strand="+" ref_id="SGN-E719295" ref_strand="+">
        <total_alignment_score>0.988</total_alignment_score>
        <cumulative_length_of_scored_exons>825</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0167M06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E719295" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="52777" e_stop="53601"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAGTCCCGACAAGAGACCACAATTGTAATTTTTGCATTTGCTTGCGTATGTCACTCCAGAGGAGCCTCGACTCTTCTTCACAAGCGAAACAACTAAAACCCCTCTTTCTAATTACATTGATTTTCTAGCAACATTTCCTCAAGAAATCTGTAAGTATTCATACATTCAATTTTGCTTGTTTTTAGATTTGGGGTACCATCAAATTCTCTAAATTTATTGAAATTTGATAGCTTGATTGATCTTCGTACAAAGTATTCTTAGTTGTATTGGATCTGAATAGGATTGCAATCAAGAAATTCTGAAGTTGGGTTTGCTGATTTGGGTCTTTATGTGATTTGACGTTCAATAAATTAGTCTGAAGTGCAAGATTCTTGATTTTCTGATTTGGGGTTTTCTATATCTGTTTCAAGATTCAATTTTTCTGAGGATTCTGTATTGAATTTGATTAATGACATTACAAGAAGGTTAAATAAAGGGGAGGAAGTAGTGTATTTGTAAGCATTTTAGCAATAAAGTTGAAGAAGGAATTGTGAGTAACTGAGGGGGTTAAAGGTTTCTTCACATGGGGAAACCATTGTTTTATGAGATATTGGAGAAGCCAGCAACCAGTTGTGCAATTGGAATATGTAGTGCAATTTGGTTTTATATTCAGAAGTCAAATATTGGTTATTCACATGTTGGTTTGAGTTATGAAACTGCTTTGGAGGGTCATTATTGGAGGATAATAACATCAGCACTTTCACATATTAGTGTGCTTCATCTTGTTTTCAATATGAGTGCACTTTGGAGTCTTGGAGTTGTTGAACAATTGGGGCATTTAGGTCT</genome_strand>
        <mrna_strand>GAGTCCCGACAAGAGCCCACAATTGTAATTTTTGCATTTGCTTGCGTATGTCACTCCCGAGGAGCCTCGACTCTTCTTCACAAGCGAAACAACTAAAACCCCTCTTTCTAATTACATTGATTTTCTAGCAACATTTCCTCAAGAAATCTGTAAGTATTCATACATTCAATTTTGCTTGTTTTTAGATTTGGGGTACCATCAAATTCTCTAAATTTATTGAAATTTGATAGCTTGATTGATCTTCGTACAAAGTATTCTTAGTTGTATTGGATCTGAATAGGATTGCAATCAAGAAATTCTGAAGTTGGGTTTGCTGATTTGGGTCTTTATGTGATTTGACGTTCAATAAATTAGTCTGAAGTGCAAGATTCTTGATTTTCTGATTTGGGGTTTTCTATATCTGTTTCAAGATTCAATTTTTCTGAGGATTCTGTATTGAATTTGATTAATGACATTACAAGAAGGTTAAATAAAGGGGAGGAAGTAGTGTATTTGTAAGCATTTTAGCAATAAAGTTGAAGAAGGAATTGTGAGTAACTGAGGGGGTTAAAGGTTTCTTCACATGGGGAAACCATTGTTTTATGAGATATTGGAGAAGCCAGCAACCAGTTGTGCAATTGGAATATGTAGTGCAATTTGGTTTTATATTCAGAAGTCAAATATTGGTTATTCACATGTTGGTTTGAGTTATGAAACTGCTTTGGAGGGTCATTATTGGAGGATAATAACATCAACACTTTCACATATAAATGTGCTTCACCTTGTTTTCAATATGAGTGCACTTTGGAGTCTTGGAGTTGTGAAAAAATTGGGGCATTTAGGTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E314383" ref_strand="+" ref_description="SGN-E314383 [cTOA-21-C10]">
      <seq>ccacaattgtaatttttgcatttgcttgcgtatgtcactccagaggagcctcgactcttcttcacaagcgaaacaactaaaacccctctttctaattacattgattttctagcaacatttcctcaagaaatctgattgcaatcaagaaattctgaagttgggtttgctgatttgggtctttatgtgatttgacgttcaataaattagtctgaagtgcaagattcttgattttctgatttggggttttctatatctgtttcaagattcaatttttctgaggattctgtattgaatttgattaatgacattacaagaaggttaaataaaggggaggaagtagtgtatttgtaagcattttagcaataaagttgaagaaggaattgtgagtaactgagggggttaaaggtttcttcacatggggaaaccattgttttatgagatattggagaagccagcaaccagttgtgcaattggaatatgtagtgcaatttggttttatattcagaagtcaaatattggttattcacatgttggttgagttatgaaactgcttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0167M06.1" temp_strand="+" temp_description="C06HBa0167M06.1  AC211057.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0167M06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="52493" stop="53778"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="52793" g_stop="52925" g_length="133"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="133" r_length="133" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="52926" i_stop="53056" i_length="131">
            <donor d_prob="0.883" d_score="1.00"/>
            <acceptor a_prob="0.870" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="53057" g_stop="53478" g_length="422"/>
          <reference_exon_boundary r_type="cDNA" r_start="134" r_stop="554" r_length="421" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0167M06.1" gen_strand="+" ref_id="SGN-E314383" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>555</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0167M06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E314383" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="52793" e_stop="52925"/>
          <exon e_start="53057" e_stop="53478"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCACAATTGTAATTTTTGCATTTGCTTGCGTATGTCACTCCAGAGGAGCCTCGACTCTTCTTCACAAGCGAAACAACTAAAACCCCTCTTTCTAATTACATTGATTTTCTAGCAACATTTCCTCAAGAAATCTGTAAGTATTCATACATTCAATTTTGCTTGTTTTTAGATTTGGGGTACCATCAAATTCTCTAAATTTATTGAAATTTGATAGCTTGATTGATCTTCGTACAAAGTATTCTTAGTTGTATTGGATCTGAATAGGATTGCAATCAAGAAATTCTGAAGTTGGGTTTGCTGATTTGGGTCTTTATGTGATTTGACGTTCAATAAATTAGTCTGAAGTGCAAGATTCTTGATTTTCTGATTTGGGGTTTTCTATATCTGTTTCAAGATTCAATTTTTCTGAGGATTCTGTATTGAATTTGATTAATGACATTACAAGAAGGTTAAATAAAGGGGAGGAAGTAGTGTATTTGTAAGCATTTTAGCAATAAAGTTGAAGAAGGAATTGTGAGTAACTGAGGGGGTTAAAGGTTTCTTCACATGGGGAAACCATTGTTTTATGAGATATTGGAGAAGCCAGCAACCAGTTGTGCAATTGGAATATGTAGTGCAATTTGGTTTTATATTCAGAAGTCAAATATTGGTTATTCACATGTTGGTTTGAGTTATGAAACTGCTTT</genome_strand>
        <mrna_strand>CCACAATTGTAATTTTTGCATTTGCTTGCGTATGTCACTCCAGAGGAGCCTCGACTCTTCTTCACAAGCGAAACAACTAAAACCCCTCTTTCTAATTACATTGATTTTCTAGCAACATTTCCTCAAGAAATCT...................................................................................................................................GATTGCAATCAAGAAATTCTGAAGTTGGGTTTGCTGATTTGGGTCTTTATGTGATTTGACGTTCAATAAATTAGTCTGAAGTGCAAGATTCTTGATTTTCTGATTTGGGGTTTTCTATATCTGTTTCAAGATTCAATTTTTCTGAGGATTCTGTATTGAATTTGATTAATGACATTACAAGAAGGTTAAATAAAGGGGAGGAAGTAGTGTATTTGTAAGCATTTTAGCAATAAAGTTGAAGAAGGAATTGTGAGTAACTGAGGGGGTTAAAGGTTTCTTCACATGGGGAAACCATTGTTTTATGAGATATTGGAGAAGCCAGCAACCAGTTGTGCAATTGGAATATGTAGTGCAATTTGGTTTTATATTCAGAAGTCAAATATTGGTTATTCACATGTTGG-TTGAGTTATGAAACTGCTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E327006" ref_strand="+" ref_description="SGN-E327006 [cTOC-18-C12]">
      <seq>cacaattgtaatttttgcatttgcttgcgtatgtcactccagaggagcctcgactcttcttcacaagcgaaacaactaaaacccctctttctaattacattgattttctagcaacatttcctcaagaaatctgtaagtattcatacattcaattttgcttgtttttagatttggggtaccatcaaattctctaaatttattgaaatttgatagcttgattgatcttcgtacaaagtattcttagttgtattggatctgaataggattgcaatcaagaaattctgaagttgggtttgctgatttgggtctttatgtgatttgacgttcaataaattagtctgaagtgcaagattcttgattttctgatttggggttttctatatctgtttcaagattcaatttttctgaggattctgtattgaatttgattaatgacattacaagaaggttaaataaaggggaggaagtagtgtatttgtaagcattttagcaataaagttgaagaaggaattgtgagtaactgagggggttaaaggtttcttcacatggggaaaccattgttttatgagatattggagaagccagcaaccagttgtgcaattggaatatgtagtgcaatttggttttatattcagaagtcaaatattggttattcacatgttggtttgagttatgaaactgctttggagggtcatttattggaggatataacatcagcactttcacatattagtgtgcttcatcttgtttttcatatgagtgcactttgggagtcttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0167M06.1" temp_strand="+" temp_description="C06HBa0167M06.1  AC211057.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0167M06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="52494" stop="53870"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="52794" g_stop="53570" g_length="777"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="778" r_length="778" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0167M06.1" gen_strand="+" ref_id="SGN-E327006" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>777</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0167M06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E327006" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="52794" e_stop="53570"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CACAATTGTAATTTTTGCATTTGCTTGCGTATGTCACTCCAGAGGAGCCTCGACTCTTCTTCACAAGCGAAACAACTAAAACCCCTCTTTCTAATTACATTGATTTTCTAGCAACATTTCCTCAAGAAATCTGTAAGTATTCATACATTCAATTTTGCTTGTTTTTAGATTTGGGGTACCATCAAATTCTCTAAATTTATTGAAATTTGATAGCTTGATTGATCTTCGTACAAAGTATTCTTAGTTGTATTGGATCTGAATAGGATTGCAATCAAGAAATTCTGAAGTTGGGTTTGCTGATTTGGGTCTTTATGTGATTTGACGTTCAATAAATTAGTCTGAAGTGCAAGATTCTTGATTTTCTGATTTGGGGTTTTCTATATCTGTTTCAAGATTCAATTTTTCTGAGGATTCTGTATTGAATTTGATTAATGACATTACAAGAAGGTTAAATAAAGGGGAGGAAGTAGTGTATTTGTAAGCATTTTAGCAATAAAGTTGAAGAAGGAATTGTGAGTAACTGAGGGGGTTAAAGGTTTCTTCACATGGGGAAACCATTGTTTTATGAGATATTGGAGAAGCCAGCAACCAGTTGTGCAATTGGAATATGTAGTGCAATTTGGTTTTATATTCAGAAGTCAAATATTGGTTATTCACATGTTGGTTTGAGTTATGAAACTGCTTTGGAGGGTCA-TTATTGGAGGATAATAACATCAGCACTTTCACATATTAGTGTGCTTCATCTTGTTTTCAATATGAGTGCACTTT-GGAGTCTTG</genome_strand>
        <mrna_strand>CACAATTGTAATTTTTGCATTTGCTTGCGTATGTCACTCCAGAGGAGCCTCGACTCTTCTTCACAAGCGAAACAACTAAAACCCCTCTTTCTAATTACATTGATTTTCTAGCAACATTTCCTCAAGAAATCTGTAAGTATTCATACATTCAATTTTGCTTGTTTTTAGATTTGGGGTACCATCAAATTCTCTAAATTTATTGAAATTTGATAGCTTGATTGATCTTCGTACAAAGTATTCTTAGTTGTATTGGATCTGAATAGGATTGCAATCAAGAAATTCTGAAGTTGGGTTTGCTGATTTGGGTCTTTATGTGATTTGACGTTCAATAAATTAGTCTGAAGTGCAAGATTCTTGATTTTCTGATTTGGGGTTTTCTATATCTGTTTCAAGATTCAATTTTTCTGAGGATTCTGTATTGAATTTGATTAATGACATTACAAGAAGGTTAAATAAAGGGGAGGAAGTAGTGTATTTGTAAGCATTTTAGCAATAAAGTTGAAGAAGGAATTGTGAGTAACTGAGGGGGTTAAAGGTTTCTTCACATGGGGAAACCATTGTTTTATGAGATATTGGAGAAGCCAGCAACCAGTTGTGCAATTGGAATATGTAGTGCAATTTGGTTTTATATTCAGAAGTCAAATATTGGTTATTCACATGTTGGTTTGAGTTATGAAACTGCTTTGGAGGGTCATTTATTGGAGGAT-ATAACATCAGCACTTTCACATATTAGTGTGCTTCATCTTGTTTTTCATATGAGTGCACTTTGGGAGTCTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E550500" ref_strand="+" ref_description="SGN-E550500 [TUS-6-E23]">
      <seq>cttgcgtatgtcactccagaggagcctcgactcttcttcacaagcgaaacaactaaaacccctctttctaattacattgattttctagcaacatttcctcaagaaatctgtaagtattcatacattcaattttgcttgtttttagatttggggtaccatcaaattctctaaatttattgaaatttgatagcttgattgatcttcgtacaaagtattcttagttgtattggatctgaataggattgcaatcaagaaattctgaagttgggtttgctgatttgggtctttatgtgatttgacgttcaataaattagtctgaagtgcaagattcttgattttctgatttggggttttctatatctgtttcaagattcaatttttctgaggattctgtattgaatttgattaatgacattacaagaaggttaaataaaggggaggaagtagtgtatttgtaagcattttagcaataaagttgaagaaggaattgtgagtaactgagggggttaaaggtttcttcacatggagaaaccattgttttatgagatattggagaagccagcaaccagttgtgcaattggaatatgtagtgcaatttggttttatattcagaagtcaaatattggttattcacatgttggtttgagttatgaaactgctttggagggtcattattggaggataataacatcagcactttcacatattagtgtgcttcatcttgttttcaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0167M06.1" temp_strand="+" temp_description="C06HBa0167M06.1  AC211057.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0167M06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="52517" stop="53848"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="52817" g_stop="53548" g_length="732"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="732" r_length="732" r_score="0.999"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0167M06.1" gen_strand="+" ref_id="SGN-E550500" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>732</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0167M06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E550500" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="52817" e_stop="53548"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTGCGTATGTCACTCCAGAGGAGCCTCGACTCTTCTTCACAAGCGAAACAACTAAAACCCCTCTTTCTAATTACATTGATTTTCTAGCAACATTTCCTCAAGAAATCTGTAAGTATTCATACATTCAATTTTGCTTGTTTTTAGATTTGGGGTACCATCAAATTCTCTAAATTTATTGAAATTTGATAGCTTGATTGATCTTCGTACAAAGTATTCTTAGTTGTATTGGATCTGAATAGGATTGCAATCAAGAAATTCTGAAGTTGGGTTTGCTGATTTGGGTCTTTATGTGATTTGACGTTCAATAAATTAGTCTGAAGTGCAAGATTCTTGATTTTCTGATTTGGGGTTTTCTATATCTGTTTCAAGATTCAATTTTTCTGAGGATTCTGTATTGAATTTGATTAATGACATTACAAGAAGGTTAAATAAAGGGGAGGAAGTAGTGTATTTGTAAGCATTTTAGCAATAAAGTTGAAGAAGGAATTGTGAGTAACTGAGGGGGTTAAAGGTTTCTTCACATGGGGAAACCATTGTTTTATGAGATATTGGAGAAGCCAGCAACCAGTTGTGCAATTGGAATATGTAGTGCAATTTGGTTTTATATTCAGAAGTCAAATATTGGTTATTCACATGTTGGTTTGAGTTATGAAACTGCTTTGGAGGGTCATTATTGGAGGATAATAACATCAGCACTTTCACATATTAGTGTGCTTCATCTTGTTTTCAAT</genome_strand>
        <mrna_strand>CTTGCGTATGTCACTCCAGAGGAGCCTCGACTCTTCTTCACAAGCGAAACAACTAAAACCCCTCTTTCTAATTACATTGATTTTCTAGCAACATTTCCTCAAGAAATCTGTAAGTATTCATACATTCAATTTTGCTTGTTTTTAGATTTGGGGTACCATCAAATTCTCTAAATTTATTGAAATTTGATAGCTTGATTGATCTTCGTACAAAGTATTCTTAGTTGTATTGGATCTGAATAGGATTGCAATCAAGAAATTCTGAAGTTGGGTTTGCTGATTTGGGTCTTTATGTGATTTGACGTTCAATAAATTAGTCTGAAGTGCAAGATTCTTGATTTTCTGATTTGGGGTTTTCTATATCTGTTTCAAGATTCAATTTTTCTGAGGATTCTGTATTGAATTTGATTAATGACATTACAAGAAGGTTAAATAAAGGGGAGGAAGTAGTGTATTTGTAAGCATTTTAGCAATAAAGTTGAAGAAGGAATTGTGAGTAACTGAGGGGGTTAAAGGTTTCTTCACATGGAGAAACCATTGTTTTATGAGATATTGGAGAAGCCAGCAACCAGTTGTGCAATTGGAATATGTAGTGCAATTTGGTTTTATATTCAGAAGTCAAATATTGGTTATTCACATGTTGGTTTGAGTTATGAAACTGCTTTGGAGGGTCATTATTGGAGGATAATAACATCAGCACTTTCACATATTAGTGTGCTTCATCTTGTTTTCAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E550504" ref_strand="+" ref_description="SGN-E550504 [TUS-6-F23]">
      <seq>cttgcctatgtcactccagaggagcctcgactcttcttcacaagcgaaacaactaaaacccctctttctaattacattgattttctagcaacatttcctcaagaaatctgtaagtattcatacattcaattttgcttgtttttagatttggggtaccatcaaattctctaaatttattgaaatttgatagcttgattgatcttcgtacaaagtattcttagttgtattggatctgaataggattgcaatcaagaaattctgaagttgggtttgctgatttgggtctttatgtgatttgacgttcaataaattagtctgaagtgcaagattcttgattttctgatttggggttttctatatctgtttcaagattcaatttttctgaggattctgtattgaatttgattaatgacattacaagaaggttaaataaaggggaggaagtagtgtatttgtaagcattttagcaataaagttgaagaaggaattgtgagtaactgagggggttaaaggtttcttcacatggggaaaccattgttttatgagatattggagaagccagcaaccagttgtgcaattggaatatgtagtgcaatttggttttatattcagaagtcaaatattggttattcacatgttggtttgagttatgaaactgctttggagggtcattattggaggataataacatcagcactttcacatattagtgtgcttcatcttgttttca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0167M06.1" temp_strand="+" temp_description="C06HBa0167M06.1  AC211057.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0167M06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="52517" stop="53846"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="52817" g_stop="53546" g_length="730"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="730" r_length="730" r_score="0.999"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0167M06.1" gen_strand="+" ref_id="SGN-E550504" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>730</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0167M06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E550504" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="52817" e_stop="53546"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTGCGTATGTCACTCCAGAGGAGCCTCGACTCTTCTTCACAAGCGAAACAACTAAAACCCCTCTTTCTAATTACATTGATTTTCTAGCAACATTTCCTCAAGAAATCTGTAAGTATTCATACATTCAATTTTGCTTGTTTTTAGATTTGGGGTACCATCAAATTCTCTAAATTTATTGAAATTTGATAGCTTGATTGATCTTCGTACAAAGTATTCTTAGTTGTATTGGATCTGAATAGGATTGCAATCAAGAAATTCTGAAGTTGGGTTTGCTGATTTGGGTCTTTATGTGATTTGACGTTCAATAAATTAGTCTGAAGTGCAAGATTCTTGATTTTCTGATTTGGGGTTTTCTATATCTGTTTCAAGATTCAATTTTTCTGAGGATTCTGTATTGAATTTGATTAATGACATTACAAGAAGGTTAAATAAAGGGGAGGAAGTAGTGTATTTGTAAGCATTTTAGCAATAAAGTTGAAGAAGGAATTGTGAGTAACTGAGGGGGTTAAAGGTTTCTTCACATGGGGAAACCATTGTTTTATGAGATATTGGAGAAGCCAGCAACCAGTTGTGCAATTGGAATATGTAGTGCAATTTGGTTTTATATTCAGAAGTCAAATATTGGTTATTCACATGTTGGTTTGAGTTATGAAACTGCTTTGGAGGGTCATTATTGGAGGATAATAACATCAGCACTTTCACATATTAGTGTGCTTCATCTTGTTTTCA</genome_strand>
        <mrna_strand>CTTGCCTATGTCACTCCAGAGGAGCCTCGACTCTTCTTCACAAGCGAAACAACTAAAACCCCTCTTTCTAATTACATTGATTTTCTAGCAACATTTCCTCAAGAAATCTGTAAGTATTCATACATTCAATTTTGCTTGTTTTTAGATTTGGGGTACCATCAAATTCTCTAAATTTATTGAAATTTGATAGCTTGATTGATCTTCGTACAAAGTATTCTTAGTTGTATTGGATCTGAATAGGATTGCAATCAAGAAATTCTGAAGTTGGGTTTGCTGATTTGGGTCTTTATGTGATTTGACGTTCAATAAATTAGTCTGAAGTGCAAGATTCTTGATTTTCTGATTTGGGGTTTTCTATATCTGTTTCAAGATTCAATTTTTCTGAGGATTCTGTATTGAATTTGATTAATGACATTACAAGAAGGTTAAATAAAGGGGAGGAAGTAGTGTATTTGTAAGCATTTTAGCAATAAAGTTGAAGAAGGAATTGTGAGTAACTGAGGGGGTTAAAGGTTTCTTCACATGGGGAAACCATTGTTTTATGAGATATTGGAGAAGCCAGCAACCAGTTGTGCAATTGGAATATGTAGTGCAATTTGGTTTTATATTCAGAAGTCAAATATTGGTTATTCACATGTTGGTTTGAGTTATGAAACTGCTTTGGAGGGTCATTATTGGAGGATAATAACATCAGCACTTTCACATATTAGTGTGCTTCATCTTGTTTTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E369173" ref_strand="+" ref_description="SGN-E369173 [TUS-23-G4]">
      <seq>ttgcgtatgtcactccagaggagcctcgactcttcttcacaagcgaaacaactaaaacccctctttctaattacattgattttctagcaacatttcctcaagaaatctgtaagtattcatacattcaattttgcttgtttttagatttggggtaccatcaaattctctaaatttattgaaatttgatagcttgattgatcttcgtacaaagtattcttagttgtattggatctgaataggattgcaatcaagaaattctgaagttgggtttgctgatttgggtctttatgtgatttgacgttcaataaattagtctgaagtgcaagattcttgattttctgatttggggttttctatatctgtttcaagattcaatttttctgaggattctgtattgaatttgattaatgacattacaagaaggttaaataaaggggaggaagtagtgtatttgtaagcattttagcaataaagttgaagaaggaattgtgagtaactgagggggttaaaggtttcttcacatggggaaaccattgttttatgagatattggagaagccag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0167M06.1" temp_strand="+" temp_description="C06HBa0167M06.1  AC211057.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0167M06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="52518" stop="53678"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="52818" g_stop="53378" g_length="561"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="561" r_length="561" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0167M06.1" gen_strand="+" ref_id="SGN-E369173" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>561</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0167M06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E369173" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="52818" e_stop="53378"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGCGTATGTCACTCCAGAGGAGCCTCGACTCTTCTTCACAAGCGAAACAACTAAAACCCCTCTTTCTAATTACATTGATTTTCTAGCAACATTTCCTCAAGAAATCTGTAAGTATTCATACATTCAATTTTGCTTGTTTTTAGATTTGGGGTACCATCAAATTCTCTAAATTTATTGAAATTTGATAGCTTGATTGATCTTCGTACAAAGTATTCTTAGTTGTATTGGATCTGAATAGGATTGCAATCAAGAAATTCTGAAGTTGGGTTTGCTGATTTGGGTCTTTATGTGATTTGACGTTCAATAAATTAGTCTGAAGTGCAAGATTCTTGATTTTCTGATTTGGGGTTTTCTATATCTGTTTCAAGATTCAATTTTTCTGAGGATTCTGTATTGAATTTGATTAATGACATTACAAGAAGGTTAAATAAAGGGGAGGAAGTAGTGTATTTGTAAGCATTTTAGCAATAAAGTTGAAGAAGGAATTGTGAGTAACTGAGGGGGTTAAAGGTTTCTTCACATGGGGAAACCATTGTTTTATGAGATATTGGAGAAGCCAG</genome_strand>
        <mrna_strand>TTGCGTATGTCACTCCAGAGGAGCCTCGACTCTTCTTCACAAGCGAAACAACTAAAACCCCTCTTTCTAATTACATTGATTTTCTAGCAACATTTCCTCAAGAAATCTGTAAGTATTCATACATTCAATTTTGCTTGTTTTTAGATTTGGGGTACCATCAAATTCTCTAAATTTATTGAAATTTGATAGCTTGATTGATCTTCGTACAAAGTATTCTTAGTTGTATTGGATCTGAATAGGATTGCAATCAAGAAATTCTGAAGTTGGGTTTGCTGATTTGGGTCTTTATGTGATTTGACGTTCAATAAATTAGTCTGAAGTGCAAGATTCTTGATTTTCTGATTTGGGGTTTTCTATATCTGTTTCAAGATTCAATTTTTCTGAGGATTCTGTATTGAATTTGATTAATGACATTACAAGAAGGTTAAATAAAGGGGAGGAAGTAGTGTATTTGTAAGCATTTTAGCAATAAAGTTGAAGAAGGAATTGTGAGTAACTGAGGGGGTTAAAGGTTTCTTCACATGGGGAAACCATTGTTTTATGAGATATTGGAGAAGCCAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E241929" ref_strand="+" ref_description="SGN-E241929 [cLED-27-L8]">
      <seq>ttgcgtatgtcactttagaggagtctcgactcttcttcacaagcgagacaactaaaacccctctttctaattacattgattttctagcaacatttcctcaagaaatctgtaagtattcatacattcaattttgcttgtttttagatttggggtaccatcaaattctctaaatttattgaaatttgatagcttgattgatcttcgtacaaagtattcttagttgtattggatctgaataggattgcaatcaagaaattctgaagttgggtttgctgatttgggtctttatgtgatttgacgttcaataaattagtctgaagtgcaagattcttgattttctgatttggggttttctatatctgtttcaagattcaatttttctgaggattctgtattgaatttgattaatgacattacaagaaggttaaataaaggggaggaagtagtgtatttgtaagcattttagcaataaagttgaagaaggaattgtgagtaactgagggggttaaaggtttcttcacatggggaaaccattgttttatgagatattgga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0167M06.1" temp_strand="+" temp_description="C06HBa0167M06.1  AC211057.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0167M06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="52518" stop="53670"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="52818" g_stop="53370" g_length="553"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="553" r_length="553" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0167M06.1" gen_strand="+" ref_id="SGN-E241929" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>553</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0167M06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E241929" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="52818" e_stop="53370"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGCGTATGTCACTCCAGAGGAGCCTCGACTCTTCTTCACAAGCGAAACAACTAAAACCCCTCTTTCTAATTACATTGATTTTCTAGCAACATTTCCTCAAGAAATCTGTAAGTATTCATACATTCAATTTTGCTTGTTTTTAGATTTGGGGTACCATCAAATTCTCTAAATTTATTGAAATTTGATAGCTTGATTGATCTTCGTACAAAGTATTCTTAGTTGTATTGGATCTGAATAGGATTGCAATCAAGAAATTCTGAAGTTGGGTTTGCTGATTTGGGTCTTTATGTGATTTGACGTTCAATAAATTAGTCTGAAGTGCAAGATTCTTGATTTTCTGATTTGGGGTTTTCTATATCTGTTTCAAGATTCAATTTTTCTGAGGATTCTGTATTGAATTTGATTAATGACATTACAAGAAGGTTAAATAAAGGGGAGGAAGTAGTGTATTTGTAAGCATTTTAGCAATAAAGTTGAAGAAGGAATTGTGAGTAACTGAGGGGGTTAAAGGTTTCTTCACATGGGGAAACCATTGTTTTATGAGATATTGGA</genome_strand>
        <mrna_strand>TTGCGTATGTCACTTTAGAGGAGTCTCGACTCTTCTTCACAAGCGAGACAACTAAAACCCCTCTTTCTAATTACATTGATTTTCTAGCAACATTTCCTCAAGAAATCTGTAAGTATTCATACATTCAATTTTGCTTGTTTTTAGATTTGGGGTACCATCAAATTCTCTAAATTTATTGAAATTTGATAGCTTGATTGATCTTCGTACAAAGTATTCTTAGTTGTATTGGATCTGAATAGGATTGCAATCAAGAAATTCTGAAGTTGGGTTTGCTGATTTGGGTCTTTATGTGATTTGACGTTCAATAAATTAGTCTGAAGTGCAAGATTCTTGATTTTCTGATTTGGGGTTTTCTATATCTGTTTCAAGATTCAATTTTTCTGAGGATTCTGTATTGAATTTGATTAATGACATTACAAGAAGGTTAAATAAAGGGGAGGAAGTAGTGTATTTGTAAGCATTTTAGCAATAAAGTTGAAGAAGGAATTGTGAGTAACTGAGGGGGTTAAAGGTTTCTTCACATGGGGAAACCATTGTTTTATGAGATATTGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E549923" ref_strand="+" ref_description="SGN-E549923 [TUS-6-F24]">
      <seq>tatgtcactccagaggagcctcgactcttcttcacaagcgaaacaactaaaacccctctttctaattacattgattttctagcaacatttcctcaagaaatctgtaagtattcatacattcaattttgcttgtttttagatttggggtaccatcaaattctctaaatttattgaaatttgatagcttgattgatcttcgtacaaagtattcttagttgtattggatctgaataggattgcaatcaagaaattctgaagttgggtttgctgatttgggtctttatgtgatttgacgttcaataaattagtctgaagtgcaagattcttgattttctgatttggggttttctatatctgtttcaagattcaatttttctgaggattctgtattgaatttgattaatgacattacaagaaggttaaataaaggggaggaagtagtgtatttgtaagcattttagcaataaagttgaagaaggaattgtgagtaactgagggggttaaaggtttcttcacatagggaaaccattgttttatgagatattggagaagccagcaaccagttgtgcaattggaatnatgtagtgcatttggttttatattcagaagtcaaatattggttattcacatgttggcttgagttatgacactgctttggagggtcattattggaggataataacatcagcactttcacatattagtgtgcttcatcttgttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0167M06.1" temp_strand="+" temp_description="C06HBa0167M06.1  AC211057.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0167M06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="52523" stop="53843"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="52823" g_stop="53543" g_length="721"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="721" r_length="721" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0167M06.1" gen_strand="+" ref_id="SGN-E549923" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>721</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0167M06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E549923" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="52823" e_stop="53543"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATGTCACTCCAGAGGAGCCTCGACTCTTCTTCACAAGCGAAACAACTAAAACCCCTCTTTCTAATTACATTGATTTTCTAGCAACATTTCCTCAAGAAATCTGTAAGTATTCATACATTCAATTTTGCTTGTTTTTAGATTTGGGGTACCATCAAATTCTCTAAATTTATTGAAATTTGATAGCTTGATTGATCTTCGTACAAAGTATTCTTAGTTGTATTGGATCTGAATAGGATTGCAATCAAGAAATTCTGAAGTTGGGTTTGCTGATTTGGGTCTTTATGTGATTTGACGTTCAATAAATTAGTCTGAAGTGCAAGATTCTTGATTTTCTGATTTGGGGTTTTCTATATCTGTTTCAAGATTCAATTTTTCTGAGGATTCTGTATTGAATTTGATTAATGACATTACAAGAAGGTTAAATAAAGGGGAGGAAGTAGTGTATTTGTAAGCATTTTAGCAATAAAGTTGAAGAAGGAATTGTGAGTAACTGAGGGGGTTAAAGGTTTCTTCACATGGGGAAACCATTGTTTTATGAGATATTGGAGAAGCCAGCAACCAGTTGTGCAATTGGAAT-ATGTAGTGCAATTTGGTTTTATATTCAGAAGTCAAATATTGGTTATTCACATGTTGGTTTGAGTTATGAAACTGCTTTGGAGGGTCATTATTGGAGGATAATAACATCAGCACTTTCACATATTAGTGTGCTTCATCTTGTTT</genome_strand>
        <mrna_strand>TATGTCACTCCAGAGGAGCCTCGACTCTTCTTCACAAGCGAAACAACTAAAACCCCTCTTTCTAATTACATTGATTTTCTAGCAACATTTCCTCAAGAAATCTGTAAGTATTCATACATTCAATTTTGCTTGTTTTTAGATTTGGGGTACCATCAAATTCTCTAAATTTATTGAAATTTGATAGCTTGATTGATCTTCGTACAAAGTATTCTTAGTTGTATTGGATCTGAATAGGATTGCAATCAAGAAATTCTGAAGTTGGGTTTGCTGATTTGGGTCTTTATGTGATTTGACGTTCAATAAATTAGTCTGAAGTGCAAGATTCTTGATTTTCTGATTTGGGGTTTTCTATATCTGTTTCAAGATTCAATTTTTCTGAGGATTCTGTATTGAATTTGATTAATGACATTACAAGAAGGTTAAATAAAGGGGAGGAAGTAGTGTATTTGTAAGCATTTTAGCAATAAAGTTGAAGAAGGAATTGTGAGTAACTGAGGGGGTTAAAGGTTTCTTCACATAGGGAAACCATTGTTTTATGAGATATTGGAGAAGCCAGCAACCAGTTGTGCAATTGGAATNATGTAGTGC-ATTTGGTTTTATATTCAGAAGTCAAATATTGGTTATTCACATGTTGGCTTGAGTTATGACACTGCTTTGGAGGGTCATTATTGGAGGATAATAACATCAGCACTTTCACATATTAGTGTGCTTCATCTTGTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E340697" ref_strand="+" ref_description="SGN-E340697 [cTOF-1-F12]">
      <seq>tggggaaaccattgttttatgagatattggagaagccagcaaccagttgtgcaattggaatatgtagtgcaatttggttttatattcagaagtcaaatattggttattcacatgttggtttgagttatgaaactgctttggagggtcattattggaggataataacatcagcactttcacatattagtgtgcttcatcttgttttcaatatgagtgcactttggagtcttggagttgttgaacaattggggcatttaggtcttggtgtgcagtattatcttcattatacactggtgttggttgttctttcgggcatgcttgtcatcggaatgtaccatatcttgattcagaaatttaagctagagtattttcggagagttactgctgttggatattcttgtgtggtgtttggttggatgacgattctttcggtcaagcaaccgtcgtcaaagttgaatctttttggttttctttcacttccgatcagctttgcgccatttgagtcgctcatattcacttccattattgttcctcaagcgagttttattggacatttatcgggaattattgttggttatgctgttggttggggtttgatacatgggatgaacaattactgggcagttacaatgctgggatggactgtgcttgtgtttgttttcagtttgaaaaagtctggtacatttgatttgaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0167M06.1" temp_strand="+" temp_description="C06HBa0167M06.1  AC211057.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0167M06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="53040" stop="54333"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="53340" g_stop="54033" g_length="694"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="694" r_length="694" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0167M06.1" gen_strand="+" ref_id="SGN-E340697" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>694</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0167M06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E340697" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="53340" e_stop="54033"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGGGAAACCATTGTTTTATGAGATATTGGAGAAGCCAGCAACCAGTTGTGCAATTGGAATATGTAGTGCAATTTGGTTTTATATTCAGAAGTCAAATATTGGTTATTCACATGTTGGTTTGAGTTATGAAACTGCTTTGGAGGGTCATTATTGGAGGATAATAACATCAGCACTTTCACATATTAGTGTGCTTCATCTTGTTTTCAATATGAGTGCACTTTGGAGTCTTGGAGTTGTTGAACAATTGGGGCATTTAGGTCTTGGTGTGCAGTATTATCTTCATTATACACTGGTGTTGGTTGTTCTTTCGGGCATGCTTGTCATCGGAATGTACCATATCTTGATTCAGAAATTTAAGCTAGAGTATTTTCGGAGAGTTACTGCTGTTGGATATTCTTGTGTGGTGTTTGGTTGGATGACGATTCTTTCGGTCAAGCAACCGTCGTCAAAGTTGAATCTTTTTGGTTTTCTTTCACTTCCGATCAGCTTTGCGCCATTTGAGTCGCTCATATTCACTTCCATTATTGTTCCTCAAGCGAGTTTTATTGGACATTTATCGGGAATTATTGTTGGTTATGCTGTTGGTTGGGGTTTGATACATGGGATGAACAATTACTGGGCAGTTACAATGCTGGGATGGACTGTGCTTGTGTTTGTTTTCAGTTTGAAAAAGTCTGGTACATTTGATTTGAA</genome_strand>
        <mrna_strand>TGGGGAAACCATTGTTTTATGAGATATTGGAGAAGCCAGCAACCAGTTGTGCAATTGGAATATGTAGTGCAATTTGGTTTTATATTCAGAAGTCAAATATTGGTTATTCACATGTTGGTTTGAGTTATGAAACTGCTTTGGAGGGTCATTATTGGAGGATAATAACATCAGCACTTTCACATATTAGTGTGCTTCATCTTGTTTTCAATATGAGTGCACTTTGGAGTCTTGGAGTTGTTGAACAATTGGGGCATTTAGGTCTTGGTGTGCAGTATTATCTTCATTATACACTGGTGTTGGTTGTTCTTTCGGGCATGCTTGTCATCGGAATGTACCATATCTTGATTCAGAAATTTAAGCTAGAGTATTTTCGGAGAGTTACTGCTGTTGGATATTCTTGTGTGGTGTTTGGTTGGATGACGATTCTTTCGGTCAAGCAACCGTCGTCAAAGTTGAATCTTTTTGGTTTTCTTTCACTTCCGATCAGCTTTGCGCCATTTGAGTCGCTCATATTCACTTCCATTATTGTTCCTCAAGCGAGTTTTATTGGACATTTATCGGGAATTATTGTTGGTTATGCTGTTGGTTGGGGTTTGATACATGGGATGAACAATTACTGGGCAGTTACAATGCTGGGATGGACTGTGCTTGTGTTTGTTTTCAGTTTGAAAAAGTCTGGTACATTTGATTTGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E369172" ref_strand="+" ref_description="SGN-E369172 [TUS-23-G4](-)">
      <seq>gtattttcggagagttactgctgttggatattcttgtgtggtgtttggttggatgacgattctttcggtcaagcaaccgtcgtcaaagttgaatctttttggttttctttcacttccgatcagctttgcgccatttgagtcgctcatattcacttccattattgttcctcaagcgagttttattggacatttatcgggaattattgttggttatgctgttggttggggtttgatacatgggatgaacaattactgggcagttacaatgctgggatggactgtgcttgtgtttgttttcagtttgaaaaagtctggtacatttgatttgaactttcttgagattgaacctgtcacggatccctctctgccttcggtacgttttttcgcagctggaactggtagaagtttacagatgagtacgttaccagatgctggtgcagatattgtatagcttttggaagatttcattgcttacttggggatcatgacgtaattctagtattagcattttgctggatgacttgttgattatgcatacttacctccaaaaccatcatttacctggtgatacattcattggttctcgaaaacctgtttgttaattgaaccaactttttaggtaaccactgtcatttataactgtggtgcgaaaagttgttattacattttatatgatatagatgaaccatgatgtattccacttaacactaaatttttgtgattgctttaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0167M06.1" temp_strand="+" temp_description="C06HBa0167M06.1  AC211057.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0167M06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="53404" stop="54732"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="53704" g_stop="54438" g_length="735"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="735" r_length="735" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0167M06.1" gen_strand="+" ref_id="SGN-E369172" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>735</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0167M06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E369172" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="53704" e_stop="54438"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTATTTTCGGAGAGTTACTGCTGTTGGATATTCTTGTGTGGTGTTTGGTTGGATGACGATTCTTTCGGTCAAGCAACCGTCGTCAAAGTTGAATCTTTTTGGTTTTCTTTCACTTCCGATCAGCTTTGCGCCATTTGAGTCGCTCATATTCACTTCCATTATTGTTCCTCAAGCGAGTTTTATTGGACATTTATCGGGAATTATTGTTGGTTATGCTGTTGGTTGGGGTTTGATACATGGGATGAACAATTACTGGGCAGTTACAATGCTGGGATGGACTGTGCTTGTGTTTGTTTTCAGTTTGAAAAAGTCTGGTACATTTGATTTGAACTTTCTTGAGATTGAACCTGTCACGGATCCCTCTCTGCCTTCGGTACGTTTTTTCGCAGCTGGAACTGGTAGAAGTTTACAGATGAGTACGTTACCAGATGCTGGTGCAGATATTGTATAGCTTTTGGAAGATTTCATTGCTTACTTGGGGATCATGACGTAATTCTAGTATTAGCATTTTGCTGGATGACTTGTTGATTATGCATACTTACCTCCAAAACCATCATTTACCTGGTGATACATTCATTGGTTCTCGAAAACCTGTTTGTTAATTGAACCAACTTTTTAGGTAACCACTGTCATTTATAACTGTGGTGCGAAAAGTTGTTATTACATTTTATATGATATAGATGAACCATGATGTATTCCACTTAACACTAAATTTTTGTGATTGCTTTAGCCTTT</genome_strand>
        <mrna_strand>GTATTTTCGGAGAGTTACTGCTGTTGGATATTCTTGTGTGGTGTTTGGTTGGATGACGATTCTTTCGGTCAAGCAACCGTCGTCAAAGTTGAATCTTTTTGGTTTTCTTTCACTTCCGATCAGCTTTGCGCCATTTGAGTCGCTCATATTCACTTCCATTATTGTTCCTCAAGCGAGTTTTATTGGACATTTATCGGGAATTATTGTTGGTTATGCTGTTGGTTGGGGTTTGATACATGGGATGAACAATTACTGGGCAGTTACAATGCTGGGATGGACTGTGCTTGTGTTTGTTTTCAGTTTGAAAAAGTCTGGTACATTTGATTTGAACTTTCTTGAGATTGAACCTGTCACGGATCCCTCTCTGCCTTCGGTACGTTTTTTCGCAGCTGGAACTGGTAGAAGTTTACAGATGAGTACGTTACCAGATGCTGGTGCAGATATTGTATAGCTTTTGGAAGATTTCATTGCTTACTTGGGGATCATGACGTAATTCTAGTATTAGCATTTTGCTGGATGACTTGTTGATTATGCATACTTACCTCCAAAACCATCATTTACCTGGTGATACATTCATTGGTTCTCGAAAACCTGTTTGTTAATTGAACCAACTTTTTAGGTAACCACTGTCATTTATAACTGTGGTGCGAAAAGTTGTTATTACATTTTATATGATATAGATGAACCATGATGTATTCCACTTAACACTAAATTTTTGTGATTGCTTTAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E321749" ref_strand="+" ref_description="SGN-E321749 [cTOB-25-I24]">
      <seq>ttgagtcgctcatattcacttccattattgttcctcaagcgagttttattggacatttatcgggaattattgttggttatgctgttggttggggtttgatacatgggatgaacaattactgggcagttacaatgctgggatggactgtgcttgtgtttgttttcaatttgaaaaagtctggtacatttgatttgaactttcttgagattgaacctgtcacggatccctctctgccttcggtacgttttttcgcagctggaactggtagaagtttacagatgagtacgttaccagatgctggtgcagatattgtatagcttttggaagatttcattgcttacttggggatcatgacgtaattctagtattaacattttgctggatgacttgttgattatgcatacttacctccaaaaccatcatttacctggtgatacattcattggttctcgaaaacctgtttgttaattgaaccaactttctaggtaaccactgtcatttataactgtggtgcgaaaagttgttattacattttatatgatatagatgaaccatgatgtattccacttaacactaaatttttgtgattgctttaaccctttgtgtcctatctatgcattataaatgatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0167M06.1" temp_strand="+" temp_description="C06HBa0167M06.1  AC211057.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0167M06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="53538" stop="54766"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="53838" g_stop="54466" g_length="629"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="630" r_length="630" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0167M06.1" gen_strand="+" ref_id="SGN-E321749" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>629</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0167M06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E321749" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="53838" e_stop="54466"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGAGTCGCTCATATTCACTTCCATTATTGTTCCTCAAGCGAGTTTTATTGGACATTTATCGGGAATTATTGTTGGTTATGCTGTTGGTTGGGGTTTGATACATGGGATGAACAATTACTGGGCAGTTACAATGCTGGGATGGACTGTGCTTGTGTTTGTTTTCAGTTTGAAAAAGTCTGGTACATTTGATTTGAACTTTCTTGAGATTGAACCTGTCACGGATCCCTCTCTGCCTTCGGTACGTTTTTTCGCAGCTGGAACTGGTAGAAGTTTACAGATGAGTACGTTACCAGATGCTGGTGCAGATATTGTATAGCTTTTGGAAGATTTCATTGCTTACTTGGGGATCATGACGTAATTCTAGTATTAGCATTTTGCTGGATGACTTGTTGATTATGCATACTTACCTCCAAAACCATCATTTACCTGGTGATACATTCATTGGTTCTCGAAAACCTGTTTGTTAATTGAACCAACTTTTTAGGTAACCACTGTCATTTATAACTGTGGTGCGAAAAGTTGTTATTACATTTTATATGATATAGATGAACCATGATGTATTCCACTTAACACTAAATTTTTGTGATTGCTTT-AGCCTTTGTGTCCTATCTATGCATTATAAATGATT</genome_strand>
        <mrna_strand>TTGAGTCGCTCATATTCACTTCCATTATTGTTCCTCAAGCGAGTTTTATTGGACATTTATCGGGAATTATTGTTGGTTATGCTGTTGGTTGGGGTTTGATACATGGGATGAACAATTACTGGGCAGTTACAATGCTGGGATGGACTGTGCTTGTGTTTGTTTTCAATTTGAAAAAGTCTGGTACATTTGATTTGAACTTTCTTGAGATTGAACCTGTCACGGATCCCTCTCTGCCTTCGGTACGTTTTTTCGCAGCTGGAACTGGTAGAAGTTTACAGATGAGTACGTTACCAGATGCTGGTGCAGATATTGTATAGCTTTTGGAAGATTTCATTGCTTACTTGGGGATCATGACGTAATTCTAGTATTAACATTTTGCTGGATGACTTGTTGATTATGCATACTTACCTCCAAAACCATCATTTACCTGGTGATACATTCATTGGTTCTCGAAAACCTGTTTGTTAATTGAACCAACTTTCTAGGTAACCACTGTCATTTATAACTGTGGTGCGAAAAGTTGTTATTACATTTTATATGATATAGATGAACCATGATGTATTCCACTTAACACTAAATTTTTGTGATTGCTTTAACCCTTTGTGTCCTATCTATGCATTATAAATGATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E312635" ref_strand="+" ref_description="SGN-E312635 [cLEZ-20-B2]">
      <seq>ttggttatgctgttggttggggtttgatacatgggatgaacaattactgggcagttacaatgctgggatggactgtgcttgtgtttgttttcagtttgaaaaagtctggtacatttgatttgaactttcttgagattgaacctgtcacggatccctctctgccttcggtacgttttttcgcagctggaactggtagaagtttacagatgagtacgttaccagatgctggtgcagatattgtatagcttttggaagatttcattgcttacttggggatcatgacgtaattctagtattagcattttgctggatgacttgttgattatgcatacttacctccaaaaccatcatttacctggtgatacattcattggttctcgaaaacctgtttgttaattgaaccaactttttaggtaaccactgtcatttataactgtggtgcgaaaagttgttattacattttatatgatatagatgaaccatgatgtattccacttaacactaaatttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0167M06.1" temp_strand="+" temp_description="C06HBa0167M06.1  AC211057.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0167M06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="53610" stop="54719"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="53910" g_stop="54419" g_length="510"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="510" r_length="510" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0167M06.1" gen_strand="+" ref_id="SGN-E312635" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>510</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0167M06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E312635" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="53910" e_stop="54419"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGGTTATGCTGTTGGTTGGGGTTTGATACATGGGATGAACAATTACTGGGCAGTTACAATGCTGGGATGGACTGTGCTTGTGTTTGTTTTCAGTTTGAAAAAGTCTGGTACATTTGATTTGAACTTTCTTGAGATTGAACCTGTCACGGATCCCTCTCTGCCTTCGGTACGTTTTTTCGCAGCTGGAACTGGTAGAAGTTTACAGATGAGTACGTTACCAGATGCTGGTGCAGATATTGTATAGCTTTTGGAAGATTTCATTGCTTACTTGGGGATCATGACGTAATTCTAGTATTAGCATTTTGCTGGATGACTTGTTGATTATGCATACTTACCTCCAAAACCATCATTTACCTGGTGATACATTCATTGGTTCTCGAAAACCTGTTTGTTAATTGAACCAACTTTTTAGGTAACCACTGTCATTTATAACTGTGGTGCGAAAAGTTGTTATTACATTTTATATGATATAGATGAACCATGATGTATTCCACTTAACACTAAATTTT</genome_strand>
        <mrna_strand>TTGGTTATGCTGTTGGTTGGGGTTTGATACATGGGATGAACAATTACTGGGCAGTTACAATGCTGGGATGGACTGTGCTTGTGTTTGTTTTCAGTTTGAAAAAGTCTGGTACATTTGATTTGAACTTTCTTGAGATTGAACCTGTCACGGATCCCTCTCTGCCTTCGGTACGTTTTTTCGCAGCTGGAACTGGTAGAAGTTTACAGATGAGTACGTTACCAGATGCTGGTGCAGATATTGTATAGCTTTTGGAAGATTTCATTGCTTACTTGGGGATCATGACGTAATTCTAGTATTAGCATTTTGCTGGATGACTTGTTGATTATGCATACTTACCTCCAAAACCATCATTTACCTGGTGATACATTCATTGGTTCTCGAAAACCTGTTTGTTAATTGAACCAACTTTTTAGGTAACCACTGTCATTTATAACTGTGGTGCGAAAAGTTGTTATTACATTTTATATGATATAGATGAACCATGATGTATTCCACTTAACACTAAATTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E375828" ref_strand="+" ref_description="SGN-E375828 [TUS-15-O8](-)">
      <seq>gagcaagctatatgcgtaattggccgtgcactgacttgcaagtactctatagcagacgatttcatagaggtagatgttgatataggatcttcgggtgatagcaaatgcgattgttcatctcgcgtataattatatatcaactcttactgttgatttagccttccttatcgagagtcaaactcaatcagaacttccagaacggattttaggagcggtaagattttcggagctgcagaccagttcagcaacactagttgaaatgccatccaatgggaacatgggagagttccttccttctttcccttcaaggttatggaagtcatttggaaacagtttctcccaccttgttcaggcagatactcaagatggtagctccagctccagcccctcacttgtaaaggaggttgttgataatggtctctttgaagaaggtaccaaaaaatgatctccacactgtaaatatgatgcatttttgaaacgttcaatggctccaggctcggagaattttattattgcggtttcatattgttggttgtgatggctacattcaccgctatttatagctgtagaaattacgtactacaaaaatatgtatacatttttggggagcgatttagcgacatggaactccagtagcatttttcactattagcctctgctcatcttttcatttctttttgaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0167M06.1" temp_strand="-" temp_description="C06HBa0167M06.1  AC211057.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0167M06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="58851" stop="56229"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="58551" g_stop="58109" g_length="443"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="444" r_length="444" r_score="0.993"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="58108" i_stop="56779" i_length="1330">
            <donor d_prob="0.997" d_score="0.98"/>
            <acceptor a_prob="0.998" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="56778" g_stop="56528" g_length="251"/>
          <reference_exon_boundary r_type="cDNA" r_start="445" r_stop="695" r_length="251" r_score="0.964"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0167M06.1" gen_strand="-" ref_id="SGN-E375828" ref_strand="+">
        <total_alignment_score>0.983</total_alignment_score>
        <cumulative_length_of_scored_exons>694</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0167M06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E375828" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="58551" e_stop="58109"/>
          <exon e_start="56778" e_stop="56528"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGCAAGCTATATGCGTAATTGGCCGTGCACTGACTTGCAAGTACTCTATAGCAGACGATTTCATAGAGGTAGATGTTGATATAGGATCTTC-GGTGATAGCAAATGCGATTGTTCATCTCGCGTATAATTATATATCAACTCTTACTGTTGATTTAGCCTTCCTTATCGAGAGTCAAACTCAATCAGAACTTCCAGAACGGATTTTAGGAGCGGTAAGATTTTCGGAGCTGCAGACCAGTTCAGCAACACTAGTTGAAATGCCATCCAATGGGAACATGGGAGAGTTCCTTCCTTCTTTCCCTTCAAGGTTATGGAAGTCATTTGGAAACAGTTTCTCCCACCTTGTTCAGGCAGATACTCAAGATGGTAGCTCCAGCTCCAGCCCCTCACTTGTAAAGGAGGTTGTTGATAATGGTCTCTCTGAAGAAGGTACCAAAAAATGGTAAGTGATCTTAGAATTTAAGAGGACATCATCAAATGCATGACATAATGAAAGAAACTTGAATTTTCCTTCTGTTAGTTTCACTTCTTCCCTGTTTAAGTATGACTGCATTTTTTACTTTATATAAACACTTACCATGGTAAAATGAGTATTTTTTTCTATTGCTAAGCATGACAACTACGAAAGTTTGGCTCATCCTCATTTGATCCAAAAATTGCAAAACCCTGTTTCATGGTTGGACTTCTAAGTTCTTCATTAAAAAAAGGGTTAAACTTCTGAGTTCATGCTTTATTTGACTTTATACCCTAAAGGCGCAACCTCCTTAACCTCCTATCTAAGGTCATGTCTTCGAGAAGCTGAAGCAGGACCCAATTTTCCAAGGACATGACCTTAGATAGGAGGTTATGGAGGTTGTGATTAGGGTAGAAGGTTGGTAGGTAGTTGAGCGCTGTCTCGTTTCCTAGCTGGAGGACAGGCTTGGTGGTAGGTTGGTGCATTGGACCTGTTCCCCTATTTATAGTAGTAGCACTTTTCTCGTAGTTGCATGTCTTACGACTTTTGTTACTCCATATCATTTATTGTGCTTCAGTTATCACATTAGTTGGTTAATGTTATTGCTCCTCTTTAGAATGTTATGGTATGTTCTCCCTATTATTTTTTATATCCTTTTCACTTCTTATTTTTCTTTTAACTGCTCTGATGTTCATTACTCGTGACGAGGGAAGATGATATCCACTTTACCGGTCCACAGAATGCATCAAATCATTTGAGATTCTTCCCTCATATATAGTGCCAATGGTTGTAATGACTGTCTCATCTCATGTTCGCAAATGACTCCTAAATCCGAAGAATATAAACAATGAGCTTAATAGCCAAGTATATCTACTTGGCATTTCTACCTATTTCCTTCACGTATCAAGTCTCTCGTCCAGTAGTCTAGTATAACATCCTCAGGAAACGTTATAATTTGCCAAATCTTTCTCAGAAACATTTACATTTACTCATTGCTTAAACAAAAAACATGAAATTCGTGTGTAGGTGCTAGTGTGCTGTTCTTGTTTTTCAATTTCCAATGAAGACACATCGTCAATATCCATGGAATATGTCCCTTGCGCTCTCCTTATTCTTCATTAGATGGTTCTCTCTCTTTTTTTTCTTCGTTGGACGTTTCAGATGAAATTGTTATACTCATGTTATATGCATTAAAGATATTTTTTTTTCTAATTTTCTAATAGCTTTAATGAATCTTTATATCTTCGTTTCCTCTCTGCATTCTGAAATTGAGTTTTCGTAGTAAACTGAACTTCTCTTAATCATTTGAACTTTGCAGATCTCCACACTGTAAATATGATGCATTTCTGAAACGTTCAATGGCTCCAGGCTCGGAGAATTCTATTATTGCGGTCTCATATTGTTGGTTGTGATGGCTACATTCACCGCTATTTATAGCTGTAGAAATTACGTACTACAAAAATATGTATACATTTCTGGGGAGCGATTTAGCGACATGGAACTCCAGTAGCATTCTTCACTATTAGCCTCTGCTCATCTTCTCATTTCTTTCTGAAAAAGAAAAAAAAT</genome_strand>
        <mrna_strand>GAGCAAGCTATATGCGTAATTGGCCGTGCACTGACTTGCAAGTACTCTATAGCAGACGATTTCATAGAGGTAGATGTTGATATAGGATCTTCGGGTGATAGCAAATGCGATTGTTCATCTCGCGTATAATTATATATCAACTCTTACTGTTGATTTAGCCTTCCTTATCGAGAGTCAAACTCAATCAGAACTTCCAGAACGGATTTTAGGAGCGGTAAGATTTTCGGAGCTGCAGACCAGTTCAGCAACACTAGTTGAAATGCCATCCAATGGGAACATGGGAGAGTTCCTTCCTTCTTTCCCTTCAAGGTTATGGAAGTCATTTGGAAACAGTTTCTCCCACCTTGTTCAGGCAGATACTCAAGATGGTAGCTCCAGCTCCAGCCCCTCACTTGTAAAGGAGGTTGTTGATAATGGTCTCTTTGAAGAAGGTACCAAAAAATG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTCCACACTGTAAATATGATGCATTTTTGAAACGTTCAATGGCTCCAGGCTCGGAGAATTTTATTATTGCGGTTTCATATTGTTGGTTGTGATGGCTACATTCACCGCTATTTATAGCTGTAGAAATTACGTACTACAAAAATATGTATACATTTTTGGGGAGCGATTTAGCGACATGGAACTCCAGTAGCATTTTTCACTATTAGCCTCTGCTCATCTTTTCATTTCTTTTTGAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E375829" ref_strand="+" ref_description="SGN-E375829 [TUS-15-O8]">
      <seq>aacaagacctgatcaaactctgttcgagattgttttcattgcatatggccaatcttgatggagataacgaacctgaatggataaagagggtgaaatcagaaggttccattccctttctggacccagataattgctcaaacggttgggcttctccaccagggaatagtttcatggtaagaggtccagaatacttttcaacaaaggttaaagttcccggtggtgaatttcttctgaaacctcttggttttgactggataaaaggtcctaaaaagatttctgatattctaaataatccaaaacaccgtatcaggatggctcttcaagatgaaactccaactggttgcaagccctttatttgggctttcaacttgcaagttcctagtaaggaaaatttcagtgctgttgtatattttgtgggcctcgaacccgtccctgaagggtctttgatggagcagttcttgaaaggagatgatgcatttagaactaaaaggttaaaattgattgcgaatattgttaaaggaccttggattgtaagaaaggcagttggggagcaagctatatgcgtaattggccgtgcactgacttgcaagtactctatagcagacgatttcatagaggtagatgttgatataggatcttcggtgatagcaaatgcgattgttcatctcgcgta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0167M06.1" temp_strand="-" temp_description="C06HBa0167M06.1  AC211057.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0167M06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="61890" stop="58127"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="61590" g_stop="61563" g_length="28"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="28" r_length="28" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="61562" i_stop="59072" i_length="2491">
            <donor d_prob="1.000" d_score="0.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="59071" g_stop="58427" g_length="645"/>
          <reference_exon_boundary r_type="cDNA" r_start="29" r_stop="673" r_length="645" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0167M06.1" gen_strand="-" ref_id="SGN-E375829" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>673</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0167M06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E375829" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="61590" e_stop="61563"/>
          <exon e_start="59071" e_stop="58427"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACAAGACCTGATCAAACTCTGTTCGAGGTATGTTTTTTTTTTCTCTTCAATTTCATCAGTTCATACTTCTCGTAGAATTATTTGTACAAATCGTTTCTACTTTCTTGGATTGTGGATATTTTTTAATATAATTCTGAAACATGACAGGAGAAGTGGGGTTTTACTTTTTTTTTTTACAAAATTTAATGGCAGAATTCGACAAAAAAAAATGTATTAGGTTTCCTGGAAATTGAGTGTTATGATCGAACTAATAAAACTAATCAACTGGAACTCAACAATTTTGGGGCAATTTTCTTAGGTTTATATTAAGCAAAAACTGAACTTTATGAGGAAGTAGAAACTACTGATACCAAATGGAAATAACTGAACTTAGAACAGCTGAGTGAGAACTGAGGAAGGTGAGAAAAATGTCAAATTGAGTTTATGCATTTCTTTCCCTTTCTGGGAATTAGTTATAGGATGCTCACATGCAATCACGAACTTCTTAACTTATTAAATCTCGTGTGTACACGTGTTATAATTCTATTAGCTTATTTATTCATGTCATTAGGTTGAGATACTTGGATTCTTTTAAGTTATGGGAGTGTTGGTTCGTAAGCAAAACAAATATCATCCTAAAAGCATTTGTATATAATCTACCCATACTATGGGAGGTAGGGGTGGGAGGGTAATGGAGATGGGAGCTTAGGGGGTGATGTGAAGATGAGGTGTGTTGGAGGGTAAGAAGGACACGATCAATGTAGTAATGCTACTTGTGGAATTTGTTTGTTTTCCAACAGTTTTGACTCCTCGCCCCTCGGTACCAAATACACCTTATGTTATAGCTTTAACTATAGTATGCAAGCCATCTTATTTCCTTTACCTATGTAATCTATTTGCATTTTTGGGATTCGAACGAACTTAATCTTACAATGGCTGTAGATACTGATATTGAACACAGACATGTTTAAAGAATATGACCATTAAATAATGTAAGACTTATATTTTCAAGGGGAAGTATCTGTAATATCCTTAAATCTCTGCCCCAACCGCAAGCTCTCTCAATTGTGGTGCTTGTTGAATTTTCACTAGTTCCATTCTGAGAAGTATGTTACTGAAAATGTAAATTTGATTCCTGTTGGATAAAGTTTCAAAATGAGTTCCTGTCTTTCTTGTAATGAACAAGACAAAAAGTTGACGACATCAGGGATAGGGTGTTAGGAACTCCCAGTAAGTCGACCATCCTAGAAAAACGAATTCATCTCAGGTTCACATGTTTCCTAAATGGCTTAGATTTTTCAAGTTAAGTTGAGATAGTAGTAGCTTATAGATTATGATCAGATAAGATGGTTTTAGGTTTTGATCACATTATTCCATTTTTTTCCTGATAAGATTATGCACTTGATAATATGATGTATTAGGAAAGTTTAGGCTTGTGTTCCAGTTGCCTTTTTGCTTTATTTTTATTTAAATTCGCATGAATGTTTTTCAATTACGGAAAACTTGGTCCTATAGTTTCCGTTAGTAAAGAGAATCAATTTCCATCACAAAATCACTTCAGGGAATAAAATTGCAGTAAGATAACTAGATAAGTGAGTCCAAATCTGGCTACTTTACTAGGCGTATATACAAGTATTAAATTTTAGTAGGGCAACTTTGAAGAGCACCTTTTGTATTGAACTATTTTTAAATGGAAAGGAACACCTTGTAATAGACTGCAATTCTCCTAGACTGCAAATAGCATGCAACTGAGATAGTAACAAATATTGAAGGCAGGTGGCAGCCTTCAATATTCCCAATGCAGCTTAAGTATGTTAAAGAATATGCAGAATGCAGTTTGACAGTGAAACCTCCTAGTGTCTTTTCCTATCAAGATTGAGAGGGATAAAGATCGGATGACTTAATGAAAGACTAATATATAGAAATTTTAACATATTTTAAAGCATGACTGTTATGGAAATGAACTGGCAATAATATAGTAGTTAAAACTAGATAGAGCTAACTCAGATCTAGTATCCATTATGGTAAAGAAGTTAAAGGAGGACACTACTTGGTTCCGGAAAGAAAGAGTGATTTCATCAGATTGATGTTAGCCTATGAGTTAATGAGACTGTAGATACTATTATGGTTTGTTACTGTATTTGTTAATTAACTTTAAAAAATACTATTATGGTTGGAAAATAGCGTAGAATCACTGGATATCTCATAAGTTGAGACTTTATGGCTAGACAACATACCCGTTGTTTTTTCATTTTTTATTCCTGATAGTTAGACTTATCTGTTAATATTTTCAAGCTTTTTAGATTTATTATCGAGAACTGGTAAGTTTGAGGGGAGCTAATCTCTCGTACACTCTACCCTCCCCAGGCCCCACTTTGTGGGATTTCACTGGGTATGTTGTTGAGGGGAGCTGATCTGCAGTAGTTTTACATTCTAATAAATTTGAAGTAATGTTTTTAGTATATCCGTTCTGATTTATTTCAGAAACAACATCTGGTAATAAAATCCTTTGATTTTAATCTAAGTTGGTGTCCTACAGATTGTTTTCATTGCATATGGCCAATCTTGATGGAGATAACGAACCTGAATGGATAAAGAGGGTGAAATCAGAAGGTTCCATTCCCTTTCTGGACCCAGATAATTGCTCAAACGGTTGGGCTTCTCCACCAGGGAATAGTTTCATGGTAAGAGGTCCAGAATACTTTTCAACAAAGGTTAAAGTTCCCGGTGGTGAATTTCTTCTGAAACCTCTTGGTTTTGACTGGATAAAAGGTCCTAAAAAGATTTCTGATATTCTAAATAATCCAAAACACCGTATCAGGATGGCTCTTCAAGATGAAACTCCAACTGGTTGCAAGCCCTTTATTTGGGCTTTCAACTTGCAAGTTCCTAGTAAGGAAAATTTCAGTGCTGTTGTATATTTTGTGGGCCTCGAACCCGTCCCTGAAGGGTCTTTGATGGAGCAGTTCTTGAAAGGAGATGATGCATTTAGAACTAAAAGGTTAAAATTGATTGCGAATATTGTTAAAGGACCTTGGATTGTAAGAAAGGCAGTTGGGGAGCAAGCTATATGCGTAATTGGCCGTGCACTGACTTGCAAGTACTCTATAGCAGACGATTTCATAGAGGTAGATGTTGATATAGGATCTTCGGTGATAGCAAATGCGATTGTTCATCTCGCGTA</genome_strand>
        <mrna_strand>AACAAGACCTGATCAAACTCTGTTCGAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGTTTTCATTGCATATGGCCAATCTTGATGGAGATAACGAACCTGAATGGATAAAGAGGGTGAAATCAGAAGGTTCCATTCCCTTTCTGGACCCAGATAATTGCTCAAACGGTTGGGCTTCTCCACCAGGGAATAGTTTCATGGTAAGAGGTCCAGAATACTTTTCAACAAAGGTTAAAGTTCCCGGTGGTGAATTTCTTCTGAAACCTCTTGGTTTTGACTGGATAAAAGGTCCTAAAAAGATTTCTGATATTCTAAATAATCCAAAACACCGTATCAGGATGGCTCTTCAAGATGAAACTCCAACTGGTTGCAAGCCCTTTATTTGGGCTTTCAACTTGCAAGTTCCTAGTAAGGAAAATTTCAGTGCTGTTGTATATTTTGTGGGCCTCGAACCCGTCCCTGAAGGGTCTTTGATGGAGCAGTTCTTGAAAGGAGATGATGCATTTAGAACTAAAAGGTTAAAATTGATTGCGAATATTGTTAAAGGACCTTGGATTGTAAGAAAGGCAGTTGGGGAGCAAGCTATATGCGTAATTGGCCGTGCACTGACTTGCAAGTACTCTATAGCAGACGATTTCATAGAGGTAGATGTTGATATAGGATCTTCGGTGATAGCAAATGCGATTGTTCATCTCGCGTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E595272" ref_strand="+" ref_description="SGN-E595272 [38542]">
      <seq>atgattcccttttaactaaaaaactttattttcctcttttttctcttccattttacaatttcattttcacgatcataatttcaaacagaaacaagacctgatcaaactcgtttgagattgttttcattgcatatggccaatcttgatggagataacgaacctgaatggataaagagggtgaaatcagaaggtgcgattccctttctggagccagatgatttgctcaaacggttgggcttctccaccggggaatagtttcatggtaagaggtccagaatacttttcaacaacaggttaacagttcccggtggtgaatttcttctgaaacctattggttttgact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0167M06.1" temp_strand="-" temp_description="C06HBa0167M06.1  AC211057.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0167M06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="61957" stop="58548"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="61685" g_stop="61563" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="116" r_length="116" r_score="0.846"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="61562" i_stop="59072" i_length="2491">
            <donor d_prob="1.000" d_score="0.92"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="59071" g_stop="58848" g_length="224"/>
          <reference_exon_boundary r_type="cDNA" r_start="117" r_stop="343" r_length="227" r_score="0.946"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0167M06.1" gen_strand="-" ref_id="SGN-E595272" ref_strand="+">
        <total_alignment_score>0.911</total_alignment_score>
        <cumulative_length_of_scored_exons>347</cumulative_length_of_scored_exons>
        <coverage percentage="1.012" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0167M06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E595272" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="61685" e_stop="61563"/>
          <exon e_start="59071" e_stop="58848"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATAATTCCTAATAACCAAAAAAAACTTTATTTTATTTCCTCTTTTTTCTCTTCCATTTTGACAATTCTATTTTCACGATCATTATTTAAAACAGAAACAAGACCTGATCAAACTCTGTTCGAGGTATGTTTTTTTTTTCTCTTCAATTTCATCAGTTCATACTTCTCGTAGAATTATTTGTACAAATCGTTTCTACTTTCTTGGATTGTGGATATTTTTTAATATAATTCTGAAACATGACAGGAGAAGTGGGGTTTTACTTTTTTTTTTTACAAAATTTAATGGCAGAATTCGACAAAAAAAAATGTATTAGGTTTCCTGGAAATTGAGTGTTATGATCGAACTAATAAAACTAATCAACTGGAACTCAACAATTTTGGGGCAATTTTCTTAGGTTTATATTAAGCAAAAACTGAACTTTATGAGGAAGTAGAAACTACTGATACCAAATGGAAATAACTGAACTTAGAACAGCTGAGTGAGAACTGAGGAAGGTGAGAAAAATGTCAAATTGAGTTTATGCATTTCTTTCCCTTTCTGGGAATTAGTTATAGGATGCTCACATGCAATCACGAACTTCTTAACTTATTAAATCTCGTGTGTACACGTGTTATAATTCTATTAGCTTATTTATTCATGTCATTAGGTTGAGATACTTGGATTCTTTTAAGTTATGGGAGTGTTGGTTCGTAAGCAAAACAAATATCATCCTAAAAGCATTTGTATATAATCTACCCATACTATGGGAGGTAGGGGTGGGAGGGTAATGGAGATGGGAGCTTAGGGGGTGATGTGAAGATGAGGTGTGTTGGAGGGTAAGAAGGACACGATCAATGTAGTAATGCTACTTGTGGAATTTGTTTGTTTTCCAACAGTTTTGACTCCTCGCCCCTCGGTACCAAATACACCTTATGTTATAGCTTTAACTATAGTATGCAAGCCATCTTATTTCCTTTACCTATGTAATCTATTTGCATTTTTGGGATTCGAACGAACTTAATCTTACAATGGCTGTAGATACTGATATTGAACACAGACATGTTTAAAGAATATGACCATTAAATAATGTAAGACTTATATTTTCAAGGGGAAGTATCTGTAATATCCTTAAATCTCTGCCCCAACCGCAAGCTCTCTCAATTGTGGTGCTTGTTGAATTTTCACTAGTTCCATTCTGAGAAGTATGTTACTGAAAATGTAAATTTGATTCCTGTTGGATAAAGTTTCAAAATGAGTTCCTGTCTTTCTTGTAATGAACAAGACAAAAAGTTGACGACATCAGGGATAGGGTGTTAGGAACTCCCAGTAAGTCGACCATCCTAGAAAAACGAATTCATCTCAGGTTCACATGTTTCCTAAATGGCTTAGATTTTTCAAGTTAAGTTGAGATAGTAGTAGCTTATAGATTATGATCAGATAAGATGGTTTTAGGTTTTGATCACATTATTCCATTTTTTTCCTGATAAGATTATGCACTTGATAATATGATGTATTAGGAAAGTTTAGGCTTGTGTTCCAGTTGCCTTTTTGCTTTATTTTTATTTAAATTCGCATGAATGTTTTTCAATTACGGAAAACTTGGTCCTATAGTTTCCGTTAGTAAAGAGAATCAATTTCCATCACAAAATCACTTCAGGGAATAAAATTGCAGTAAGATAACTAGATAAGTGAGTCCAAATCTGGCTACTTTACTAGGCGTATATACAAGTATTAAATTTTAGTAGGGCAACTTTGAAGAGCACCTTTTGTATTGAACTATTTTTAAATGGAAAGGAACACCTTGTAATAGACTGCAATTCTCCTAGACTGCAAATAGCATGCAACTGAGATAGTAACAAATATTGAAGGCAGGTGGCAGCCTTCAATATTCCCAATGCAGCTTAAGTATGTTAAAGAATATGCAGAATGCAGTTTGACAGTGAAACCTCCTAGTGTCTTTTCCTATCAAGATTGAGAGGGATAAAGATCGGATGACTTAATGAAAGACTAATATATAGAAATTTTAACATATTTTAAAGCATGACTGTTATGGAAATGAACTGGCAATAATATAGTAGTTAAAACTAGATAGAGCTAACTCAGATCTAGTATCCATTATGGTAAAGAAGTTAAAGGAGGACACTACTTGGTTCCGGAAAGAAAGAGTGATTTCATCAGATTGATGTTAGCCTATGAGTTAATGAGACTGTAGATACTATTATGGTTTGTTACTGTATTTGTTAATTAACTTTAAAAAATACTATTATGGTTGGAAAATAGCGTAGAATCACTGGATATCTCATAAGTTGAGACTTTATGGCTAGACAACATACCCGTTGTTTTTTCATTTTTTATTCCTGATAGTTAGACTTATCTGTTAATATTTTCAAGCTTTTTAGATTTATTATCGAGAACTGGTAAGTTTGAGGGGAGCTAATCTCTCGTACACTCTACCCTCCCCAGGCCCCACTTTGTGGGATTTCACTGGGTATGTTGTTGAGGGGAGCTGATCTGCAGTAGTTTTACATTCTAATAAATTTGAAGTAATGTTTTTAGTATATCCGTTCTGATTTATTTCAGAAACAACATCTGGTAATAAAATCCTTTGATTTTAATCTAAGTTGGTGTCCTACAGATTGTTTTCATTGCATATGGCCAATCTTGATGGAGATAACGAACCTGAATGGATAAAGAGGGTGAAATCAGAAGGTTCCATTCCCTTTCTGGACCCAGAT-AATTGCTCAAACGGTTGGGCTTCTCCACCAGGGAATAGTTTCATGGTAAGAGGTCCAGAATACTTTTCAACAA-AGGTTAA-AGTTCCCGGTGGTGAATTTCTTCTGAAACCTCTTGGTTTTGACT</genome_strand>
        <mrna_strand>ATGATTCCCTTTTAACTAAA-AAACTTTAT-TT---TCCTCTTTTTTCTCTTCCATTTT-ACAATTTCATTTTCACGATCATAATTTCAAACAGAAACAAGACCTGATCAAACTC-GTTTGAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGTTTTCATTGCATATGGCCAATCTTGATGGAGATAACGAACCTGAATGGATAAAGAGGGTGAAATCAGAAGGTGCGATTCCCTTTCTGGAGCCAGATGATTTGCTCAAACGGTTGGGCTTCTCCACCGGGGAATAGTTTCATGGTAAGAGGTCCAGAATACTTTTCAACAACAGGTTAACAGTTCCCGGTGGTGAATTTCTTCTGAAACCTATTGGTTTTGACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E746154" ref_strand="+" ref_description="SGN-E746154 [GI|47104900]">
      <seq>ggtcctccctgtccgaatttatagtgtttccattctcacacagatttgcctctttgtttatcgtctctcttctccacaagcttttcccttttctctctcgcatgtgataaagctgcttccttctgcttctgcttcccttttcacatttttcccttctctgcacatctaatttcaaagctaatcgaaaccgtagggaattgatctgggataagcttgtttggtgtttgcggaatctacagggtctcagcaaggggtttcatgttctgaggaaaagcaacttggattgtgattttatggttttcctgctataatgttcttgctttgaccggggaaaagtatcattacttgttgatttttggttttctgttggtacggttcttgttggagtatatatatatgtgtgggatgttgggtttgttcctgtgctgttaacatttggaatttgaagggttggggttttttctgtttggatttggagggtttgtatggataaggataagtcttcttcaagccatataggaggttcgttgcctccatcagggagatactcattattttcacctcccggtagtagctccaatgtaaagtcagaacaacctggattagcaaatttacctcccttaggacctggaaatgcttcagaatcaggtcattttggtcatggtttgtcggcagattcaagcctgtttagtcttgatataagccgaatgtctgatagcccaccaagaaaatttggtcataggcgtgcccactcagaaattcttactcttcctgatgatattagctttgatagtgatcttggcgttgttggactagatggaccgtctctgtcagatgagactgaggaggacatcttgtcaatgtaccttgacatggataagttcaattcttcaactctgtcttctgaattccaagtgggtgagtcttcttcagctgctccaggttcatcacaaacaacagcaatggcttcaggaacaaataaatttgctcctactgttagtgagaagccaagagttagacatcagcatagccagtccatggatggttcaactacaatcaagccagagatgctcatgtcaggagtggaagagccttcttcagctgaaactaagaaagccacgtcagctgctaagcttgctgaacttgctcttattgatcctaaacgtgccaagcggatttgggccaacaggcagtcagctgcaagatcaaaggaaaggaaaatgagatatatagcagagcttgagagaaaagttcagactctgcaaacggaagcaactactttatctactcagttgaccctattgcagagagatacaaacggcctgaatgctgaaaacagtgaacttaaactgcgtttacaaacaatggaacaacaggttcacttgcaagatgcgttgaatgatgctttaaaggaggagatacagcatctgaaagtgctaactgggcaaggcatagcaaatggtggacctatgatgaacttcccagcaacctttggaggcaatcagcagttctactctaacaaccaggcaatgcatacattgttggctgcacaacaacttcaacagctccagctacattctcataagcaacaacaccagtttcagcaacatcagctacaccagtttcagcagcaacagttgcagcaccaacaacagcaacagcaacctcttatgcagcagcagcagcagcaggatcaactttcacaagccggagatgtgatgtcaagaggttctctgtcatctcctcaaaatgaaaacgcttctgatgttagttctgtagcaaaggattgaacagctgatggccagagagacaggagatggtgtatgttttaaaaatcatcatgtgttttcccatctagcagctcatttttgtgtttcaaaatcatcacgtgttgaaacaacatctagctcaggttctcttgctttcagttagctccttcatctgcattttagtacttttgtagggtcatttgacttttagttgaaattgttcaaatcccattctatgcatatgtcattttgtcaactatcaacatgattttcttcatgttaccaatattgttggtggtagtttttttggacatcaatcacttatatctcttttgaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0167M06.1" temp_strand="-" temp_description="C06HBa0167M06.1  AC211057.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0167M06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="72362" stop="64164"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="72139" g_stop="71949" g_length="191"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="191" r_length="191" r_score="0.991"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="71948" i_stop="71675" i_length="274">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="71674" g_stop="71600" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="192" r_stop="266" r_length="75" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="71599" i_stop="71531" i_length="69">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.391" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="71530" g_stop="70623" g_length="908"/>
          <reference_exon_boundary r_type="cDNA" r_start="267" r_stop="1174" r_length="908" r_score="0.998"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="70622" i_stop="66699" i_length="3924">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="66698" g_stop="66566" g_length="133"/>
          <reference_exon_boundary r_type="cDNA" r_start="1175" r_stop="1307" r_length="133" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="66565" i_stop="66313" i_length="253">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="66312" g_stop="66228" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="1308" r_stop="1392" r_length="85" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="66227" i_stop="65174" i_length="1054">
            <donor d_prob="0.867" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="65173" g_stop="64464" g_length="710"/>
          <reference_exon_boundary r_type="cDNA" r_start="1393" r_stop="2102" r_length="710" r_score="0.999"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="64463" i_stop="64177" i_length="287">
            <donor d_prob="0.000" d_score="0.98"/>
            <acceptor a_prob="0.962" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="64176" g_stop="64164" g_length="13"/>
          <reference_exon_boundary r_type="cDNA" r_start="2103" r_stop="2115" r_length="13" r_score="0.692"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0167M06.1" gen_strand="-" ref_id="SGN-E746154" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>2115</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0167M06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E746154" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="72139" e_stop="71949"/>
          <exon e_start="71674" e_stop="71600"/>
          <exon e_start="71530" e_stop="70623"/>
          <exon e_start="66698" e_stop="66566"/>
          <exon e_start="66312" e_stop="66228"/>
          <exon e_start="65173" e_stop="64464"/>
          <exon e_start="64176" e_stop="64164"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAGCTTTTCCCTTTTCTCTCTCGCATGTGATAAAGCTGCTTCCTTCTGCTTCTGCTTCCCTTTTCACATTTTTCCCTTCTCTGCAGATCTAATTTCAAAGCTAATCGAAACCGTGTAAGAATTTGCCCCTTTTCTATTCCATTATTTTAATGCATTGTTTTTCATTTTCTTTATCACCCATCTCCTTGATTTGTTGCCCTGTACTTCTGTTTTTGTCTGTGTGTGTTAAATTGAGAAATGGGTTTTGAATTTCTTTGATTTTTGAATGCTGGGTTTGTATTTTTTTTCTTGAATCTTTGTTGTATAGAGTTTCTGTTTATCAGAATTCCATCTTTGTATCATTAAGTTTTGTGGGTTTTGTTCATTTTTTTGTTTTTTTTATTTTCAGAGGGAATTGATCTGGGATAAGCTTGTTTGGTGTTTGCGGAATCTACAGGGTCTCAGCAAGGGGTTTCATGTTCTGGTATAGCTAACTTTTGTTAAAGTAATTCGGTTTCGGTGGAATTTGAATACCCCATGATTTTAAATGCAGAGGAAAAGCAACTTGGATTGTGATTTTATGGTTTTCCTGCTATAATGTTCTTGCTTTGACCGGGGAAAAGTATCATTACTTGTTGATTTTTGGTTTTCTGTTGGTACGGTTCTTGTTGGAGTATATATATATGTGTGGGATGTTGGGTTTGTTCCTGTGCTGTTAACATTTGGAATTTGAAGGGTTGGGGTTTTTTCTGTTTGGATTTGGAGGGTTTGTATGGATAAGGATAAGTCTTCTTCAAGCCATATAGGAGGTTCGTTGCCTCCATCAGGGAGATACTCATTATTTTCACCTCCCGGTAGTAGCTCCAATGTAAAGTCAGAACAACCTGGATTAGCAAATTTACCTCCCTTAGGACCTGGAAATGCTTCAGAATCAGGTCATTTTGGTCATGGTTTGTCGGCAGATTCAAGCCTGTTTAGTCTTGATATAAGCCGAATGTCTGATAACCCACCAAGAAAATTTGGTCATAGGCGTGCCCACTCAGAAATTCTTACTCTTCCTGATGATATTAGCTTTGATAGTGATCTTGGCGTTGTTGGACTAGATGGACCGTCTCTGTCAGATGAGACTGAGGAGGACATCTTGTCAATGTACCTTGACATGGATAAGTTCAATTCTTCAACTCTGTCTTCTGAATTCCAAGTGGGTGAGTCTTCTTCAGCTGCTCCAGGTTCATCACAAACAACAGCAATGGCTTCAGGAACAAATAAATTTGCTCCTACTGTTAGTGAGAAGCCAAGAGTTAGACATCAGCATAGCCAGTCCATGGATGGTTCAACTACAATCAAGCCAGAGATGCTCATGTCAGGAGTGGAAGAGCCTTCTTCAGCTGAAACTAAGAAAGCCACGTCAGCTGCAAAGCTTGCTGAACTTGCTCTTATTGATCCTAAACGTGCCAAGCGGTAAGGCTTTCTATGGAAATGTTGTTGCTCATTTACTATAGCAGTCTCTTTAACATTATTTTAGCTTGGCCTTGTCATTATATTTTGCTAAACTGGCACTGCTTAGGATGATACCGTTACGTGGAGGTCTGGTGGCAGACTAGAGTCTCCTAAACTATGAGCCCACTAAATGTGTGCTGGATGTTTAAAGCGGGCTTAGATATTATGCTTCATTGTTTTTTTATGAAAGCCTGCTCTGTTTTGGTGATAATCATTCATTCTGCTGGTGGTTAGGCATTTTATCTGTATTTTTCCTAGCTACTAGCTCCTTGAACTTTTGGATTTTGTTTAATGAAGCAGTTCTTGATGGAACTTCTAAAGGTCTGCCTGCGGCTTCGTCTGCTCCCTTTTCCTGTTCTAAGGCTGCCTCTGGCTGCTTCTGTCATCTTTTGCTGTTCAAAGGTTGAAAAGACTGAAATTATGAGAGTTACAGGAAGGAAAAATTAAAAAGAATAGACTGACCAGGCCCTTCTGTCTCTCTACTCTATCTGTCCAGCAAGTTGTTCCTGCTCCCCGAGCATTTCATTTCAATTTCTTGTCCTCTCCAGCTCTTCCTTGAGCCTACATCTGAACAAGCTCAGCTCCCCAAAAGTTGGTGTGTTCCAAACCACCTTTCAATAACAAATTCCTGCTTTCTTGGGTCCTCTAAATTAGTTAAAGTTAAACCTTTGTTGTTGGCTATGGGGGCCCACTGCCCCTCCCTTACTTTATAGACAATTTAAATTTATCTTCAAGAGGGAGGGGAAGGGTCAGGGAACATATGAGATTGAACACCCAAGGATATGACCTAGTGGCCAATGATGTGGGTGCAAACTCTGGAAACCCGTCCTAACAGAGACAAAAAGACGCTAGGTAATTTCTGGGCATTTGCTTAAGCCTTGCTGGCTGAGTACCCAGTAAGGTAGAAGGTAGCAAGTAGCCGGTGAAATAGTCGAGGTCCCACCATTCTTGTCTGTGCTCCACCTTAATGGAAAAAAAATAAGAGATCAAAAAAACTATGGCCCCTCCAAGGAGTGTGAAGCAGACAATTGTAGCTAATGAAGAAAGGTAAATCAATGGTGGCACATACAGAGAGACTGTGATTGTCCTTACAGGATTAGAGCCAAATACAATTCAAATGGCAGTAGAAATTTTTTTTATAAGGTTACTGGCTTGCACAAATTAGAGAAAAGTTATGGGATGGTTCGGTGTCTTAAGCTTATTTGTTGTCCTAGTCAAACTGTTCTTTTCCGGGTCCCATGCTTTTTTTGCTCAGCGACTTAGCAGTAGGCTAGTAGCTTCATTATGTTTTGTTTTGGTGGGAAAACTTAAATGTTGGTTCATTGCAGATGAAACTATAGTAGTACTTTAGTCTTGGTCTTTCTCCTGATATTAAATTAAGGCTCTTCTTATCTTTTGCTTTCTCGTGTCCTTTTACTTAGCAAAAATATTAAATAGACTTAAGGGAACTATATTACAATGTAGAGTGAGAAAATTGATTAATAGGAGCTGAATAGCAATAATGTTGTTTCTTTTGGACATCTAAGTTTAGTGACTATACTTGTAAATTAAAAACGGTTTTATAGAGTATTATCAAGAGTAAAATAAAGACTTTAGAATGCTAATATGCATGTTAACCAAGCCCGGTTTTATAGAGTTTAGTCAAGATGATTAAAATAAAGACTTTATAGGCGTCCACTATCAGTCAATGAACCAGGTCTCGACTCAGTAAGAACAGAATGTAAGCACAGACAGTAGTTAGCATCCACTATAGTTAACGGACCAGGTCTTGTGACTCAGCAAGAACAATAGCTGAAATAAGTGCAAAAAGTAAATAGCTGAAGGTAAAATTTGCACAAGCACTTTACGTGGAAACCTCCTTGCTCAAGGGAGTAAAACCACGACCTATCACACATGATTTTCAACTGTTTCACTAATCTTCTTTAAGCAAAAGTGAACCGCAGTTACAACCAATGTGAGAAAAAGTTATTAATCTCACGACCAAGTAATAACCTATTACTTGAAGAGTCTAAGCAGATGTTAGTCTGCCCACTAAGCTATCACCACTAGACAAATTAGGATTTGACTAAGCAACACGCAGGTTGCCTACTAAACCACCTAACTAAGCAGCACATACGGCTGCCTACTAAGCTATCACCACTAGACAACTTAGAATTTCAACTAAGCGAATGTCACACCGCCAACTAAATCACCTACCACTAGATAACTTAGAATTTGACTAAGCAACAACAATGTTGCCCTCTAAATCAGTTAGACTCAACTAATTTAGACCTTTTCACAAACCAAACTATCTGAATCCTTTATAGACTAGGAACAAGTTTACAATATATGGACGAAAATATAACTCCTAAGACACACTCTAATGCTTGCAACTTGATCAGGTCCTTGTTGTGTTTGCCGGAGAATACTTCACCAAAATGGTCTTTGCTTGTATACTTCAGAAGTTTCAAGATGCAAAAAAACTATAAATGAAAGAGACAAACTCAAACTCAACAAAGATGCTTCAACACTTTATAGATCTTTTTGATGAGTATGAGTATTGTTCTTTCTTGAAGATGGCTTTTTCCTTTTAACCTTGTGAGTTTTAATTTGCCAAAATCTTGTGTTTGTGTTTTGGAGAAGAGATTGTATCACCATGAACACAAACTCTTGGGACAAAGCTATTGGCCGAGAGTACGCTGTCATGAAAAGTTGTGCACCAACCACATCAGGGTTGACAACTTTTTGATAGTTGTCTTTTCGTCCTTTTCTCGTACGTAGAGTTTTCGGGACCAGGTCCCTTGCTGCGTTCTTTAATGCTTGAGTTCTTTGACAAAAGACTTGCTGACTTTTTCTCTTCTTGAATGAATGAACTTAATATGTTGTTTGTCATGTTGAATGTATCAACTCCATTTTGATTGGTTCAGTATGCTGGCGCCTCACCTACCACTGACAGGACAACTTTACAATTGTACACCATTATTGGTGCAGTACGCTGCACTTTTTACCTACCATCTGACATGGCATCTTTTTAGCTGTTCCCAGGATGAATTCGGACATTCTGCCAGGGGCCCGGTCCCTGCATTTGTGAGGATCATCAAAACATCTAGAATATTATATTTTCTCCCTTTTTGATGATTACACACAAATGTTCCTCACATTGAGTTTATTCATTAAGTTGCCCTGTCATCAGTCCCAATAACAAGGATCTGTGTCCCTTGTTAGATCAATAAGTTTATTAAATCATCAAAACTTAACATTAGCTCCAAAATAATATTTACCAACTCCATGAATGGTAAGGCAAAGTATAAGAACAATGAACATGTCTATTCACTATGACAAATAGAAAATTATTTTGAAATCCTCGACCAATCTATAAGAAAATACTTTTAATTTCTTCTGCTCAAACAGTAAATTATAGAAATTAGAAACTAGTACCATATGAGAATGGAGAAGTTTAAAAAGGTTATATAAATGAAGGATGTATATCCCAAGCTAGTGGTTCATTCGCTAAATCTATCAGAGAAAAAGATGGATGGTTTGTAAACAGTCCTTTTACCTTTTGGCTATGCTATTACTTGAAGTGGTGCTGAGGTTTGCTGTCTCCAGTCTGAAACCATTTCTCTATGTATCCATGAGGCCTTCTTTTTCCTGTCTTTTGCTCTCTTTTTAATCAGACAAATCATTAAGTTTGCTAAATACTGTTACTAGCAAAAAAAGGTTTCTTGTTGCTATCTAAGTCTTTGCACAGCTTTCTGAAAGTATTCATAGTGCATTGATGTAGGAGATCCACCTGTTTTAAGGTCTTTTGTGTTCCTTGAATTTGTTTGAATTTGTCTGATGTAGTTGTTTAAAAGTTAAGCCAATTAGTTAATCATCACTGTATTTGCTTATGCTGTGCAATAGGATTTGGGCCAACAGGCAGTCAGCTGCAAGATCAAAGGAAAGGAAAATGAGATATATAGCAGAGCTTGAGAGAAAAGTTCAGACTCTGCAAACGGAAGCAACTACTTTATCTACTCAGTTGACCCTATTGCAGGTGTATATCAGTTTCTCTCATTACTCAGTTATTTTTTGTGTTCTTTCCTCTTTTTATTTCTGTTGTTTTCTGTTATTGGAAACATGTCTAGTGTGGTTGAAGTGATGGAAGTAGATAAGTTCTTGGTCTAGAATCTGCAGCATTTGCTTGCACATGGAAAAATGTGCAGATATATGTATCTTCAGCCTTTTTCTCACGTATAACATAAGACTATTGGTTTTGATTTGCCTTTTTTTTTCTCCATATGAAACAGAGAGATACAAACGGCCTGAATGCTGAAAACAGTGAACTTAAACTGCGTTTACAAACAATGGAACAACAGGTTCACTTGCAAGATGGTAAGAATCTGAGCATGACTTCTTTTAGTAAACTTTTTGCCCATAACCCACCTCCTCTTTTTATCTGTCTGAACAATGGTTGCCGTTTCTCAATGGCATCTAGAGTGACTTTAGTTCAAGTGTTCGACCATTTAAGATGATTCAAAGTGGATTTGTTGTCAACCGCAAGTTAATATCTGGCTGTATTTAGGCTTCGTTGGTTTCAAGAATTTCCTCAATTTCAGAAGAAAGTAAAAATCAATTTTGATATACTTGATCATTTTCACATTGGGTGTGTTAACTGCGTTTTTTGTGGTTAAAAATAAAGTAATTCTGCCATATTCTCATCTTATGGTACAAAAACCGAGATAACATGAATTCCAGTTTGACCTTACAAGGTCAAACATAGTTTAAATTTGGACCGGGTTGACGTAGATATAGGAATACAATATATAGTCCAAATAATTTTGAAGTTGGTACTTTTTGAATTCTAATAGTTGTACTGGAGGTTAGATTTCAGATGTTAGAACTTCAAAAGCTTTTGTTTCTCATAACATTATCCTGTGGTTATAGAAGTGAACATTGAGAAATTCATATTGTTAGTGTCATGATTGGCACCCATGTATTAGGTAATATTCTGTTTAATCCGTAAAAAATCTTGATAAGTATGTCAGTGTTAAGAAATGTGAGGAAGTTATCAATAAGGTGGTTAGGAGACACCGAGAGGCTGCTAATCACCTTGTAGGTTCTTGAAACCATTGAAATTTTCAATGATCATATTTCAACCAGAACCTTGTTTTTCTGCTCTCCGTGAACAATGCAATTAGGCAGATAAGAACTTCTTCAGTCAAATTCCGCTTGCAACTCTATGTGGATAATGGATTTAGCACCTGACTACTGAGTAACATATGCCTAGGGAAAACACTTCCATGAGATTGCTAGAGTTGCATATGTAATTTCCTTGGATAGGAATTTGTGAACAACTAATTCATCTCTACCAATTAGTTGGAGTTTTTTGTGTAGAGTTGCTAATAGGTATTTTGATCTGTTTCTTCTTCTTCTTCTTTCTATGTAGCGTTGAATGATGCTTTAAAGGAGGAGATACAGCATCTGAAAGTGCTAACTGGGCAAGGCATAGCAAATGGTGGACCTATGATGAACTTCCCAGCAACCTTTGGAGGCAATCAGCAGTTCTACTCTAACAACCAGGCAATGCATACATTGTTGGCTGCACAACAACTTCAACAGCTCCAGCTACATTCTCATAAGCAACAACACCAGTTTCAGCAACATCAGCTACACCAGTTTCAGCAGCAACAGTTGCAGCACCAACAACAGCAACAGCAACCTCTTATGCAGCAGCAGCAGCAGCAGGATCAACTTTCACAAGCCGGAGATGTGATGTCAAGAGGTTCTCTGTCATCTCCTCAAAATGAAAACGCTTCTGATGTTAGTTCTGTAGCAAAGGATTGAACAGCTGATGGCCAGAGAGACAGGAGATGGTGTATGTTTTAAAAATCATCATGTGTTTTCCCATCTAGCAGCTCATTTTTGTGTTTCAAAATCATCACGTGTTGAAACAACATCTAGCTCAGGTTCTCTTGCTTTCAGTTAGCTCCTTCATCTGCATTTTAGTACTTTTGTAGGGTCATTTGACTTTTAGTTGAAATTGTTCAAATCCCATTCTATGCATATGTCATTTTGTCAACTATCAACATGATTTTCTTCATGTTACCAATATTGTTGGTGGTAGTTTTTTTGGACATCAATCACTTATATCTCTCTCACACTGTTCAGTGTTCACATTTTTCGAATAATGTTTTGTGGCTTGCGCGATCGTGGAGGGTAAAATTCTCATGGTGCTCCTCAATAGGTAGGATTTACCAGAGGCGGATCCAGAGCGTAAACTATGGGGTTCAAGGAACTCCATAACTTTTATCTAGGCCTTTAAATGTATTCGTTAAATATTTGATCGTGAACTTGGTTAAATATTGTAATCCCCTATCCCTGTACATAATACTGGTTGGTTCCATCTTATAACTGTCTCTTCTAAATCTGTTATATCATTTCAGAGAAAAAGTTAAA</genome_strand>
        <mrna_strand>GGTCCTCCCTGTCCGAATTTATAGTGTTTCCATTCTCACACAGATTTGCCTCTTTGTTTATCGTCTCTCTTCTCCACAAGCTTTTCCCTTTTCTCTCTCGCATGTGATAAAGCTGCTTCCTTCTGCTTCTGCTTCCCTTTTCACATTTTTCCCTTCTCTGCACATCTAATTTCAAAGCTAATCGAAACCGT..................................................................................................................................................................................................................................................................................AGGGAATTGATCTGGGATAAGCTTGTTTGGTGTTTGCGGAATCTACAGGGTCTCAGCAAGGGGTTTCATGTTCTG.....................................................................AGGAAAAGCAACTTGGATTGTGATTTTATGGTTTTCCTGCTATAATGTTCTTGCTTTGACCGGGGAAAAGTATCATTACTTGTTGATTTTTGGTTTTCTGTTGGTACGGTTCTTGTTGGAGTATATATATATGTGTGGGATGTTGGGTTTGTTCCTGTGCTGTTAACATTTGGAATTTGAAGGGTTGGGGTTTTTTCTGTTTGGATTTGGAGGGTTTGTATGGATAAGGATAAGTCTTCTTCAAGCCATATAGGAGGTTCGTTGCCTCCATCAGGGAGATACTCATTATTTTCACCTCCCGGTAGTAGCTCCAATGTAAAGTCAGAACAACCTGGATTAGCAAATTTACCTCCCTTAGGACCTGGAAATGCTTCAGAATCAGGTCATTTTGGTCATGGTTTGTCGGCAGATTCAAGCCTGTTTAGTCTTGATATAAGCCGAATGTCTGATAGCCCACCAAGAAAATTTGGTCATAGGCGTGCCCACTCAGAAATTCTTACTCTTCCTGATGATATTAGCTTTGATAGTGATCTTGGCGTTGTTGGACTAGATGGACCGTCTCTGTCAGATGAGACTGAGGAGGACATCTTGTCAATGTACCTTGACATGGATAAGTTCAATTCTTCAACTCTGTCTTCTGAATTCCAAGTGGGTGAGTCTTCTTCAGCTGCTCCAGGTTCATCACAAACAACAGCAATGGCTTCAGGAACAAATAAATTTGCTCCTACTGTTAGTGAGAAGCCAAGAGTTAGACATCAGCATAGCCAGTCCATGGATGGTTCAACTACAATCAAGCCAGAGATGCTCATGTCAGGAGTGGAAGAGCCTTCTTCAGCTGAAACTAAGAAAGCCACGTCAGCTGCTAAGCTTGCTGAACTTGCTCTTATTGATCCTAAACGTGCCAAGCG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTTGGGCCAACAGGCAGTCAGCTGCAAGATCAAAGGAAAGGAAAATGAGATATATAGCAGAGCTTGAGAGAAAAGTTCAGACTCTGCAAACGGAAGCAACTACTTTATCTACTCAGTTGACCCTATTGCAG.............................................................................................................................................................................................................................................................AGAGATACAAACGGCCTGAATGCTGAAAACAGTGAACTTAAACTGCGTTTACAAACAATGGAACAACAGGTTCACTTGCAAGATG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTTGAATGATGCTTTAAAGGAGGAGATACAGCATCTGAAAGTGCTAACTGGGCAAGGCATAGCAAATGGTGGACCTATGATGAACTTCCCAGCAACCTTTGGAGGCAATCAGCAGTTCTACTCTAACAACCAGGCAATGCATACATTGTTGGCTGCACAACAACTTCAACAGCTCCAGCTACATTCTCATAAGCAACAACACCAGTTTCAGCAACATCAGCTACACCAGTTTCAGCAGCAACAGTTGCAGCACCAACAACAGCAACAGCAACCTCTTATGCAGCAGCAGCAGCAGCAGGATCAACTTTCACAAGCCGGAGATGTGATGTCAAGAGGTTCTCTGTCATCTCCTCAAAATGAAAACGCTTCTGATGTTAGTTCTGTAGCAAAGGATTGAACAGCTGATGGCCAGAGAGACAGGAGATGGTGTATGTTTTAAAAATCATCATGTGTTTTCCCATCTAGCAGCTCATTTTTGTGTTTCAAAATCATCACGTGTTGAAACAACATCTAGCTCAGGTTCTCTTGCTTTCAGTTAGCTCCTTCATCTGCATTTTAGTACTTTTGTAGGGTCATTTGACTTTTAGTTGAAATTGTTCAAATCCCATTCTATGCATATGTCATTTTGTCAACTATCAACATGATTTTCTTCATGTTACCAATATTGTTGGTGGTAGTTTTTTTGGACATCAATCACTTATATCTCTTT...............................................................................................................................................................................................................................................................................................TGAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E549524" ref_strand="+" ref_description="SGN-E549524 [TUS-71-D11](-)">
      <seq>caggcaatgcatacatggttggctgcacaacaacttcaacagctccagctacattctcataagcaacaacaccagtttcagcaacatcagctacaccagtttcagcagcaacagttgcagcaccaacaacagcaacagcaacctcttatgcagcagcagcagcagcaggatcaactttcacaagccggagatgtgatgtcaagaggttctctgtcatctcctcaaaatgaaaatgcttctgatggtagttctgtagcaaaggattgaacagctgatggccagagagacaggagttggtgtatgttttaaaaaatatcatgtgttttcccatctagcagctcatttttgtgtttcaaaatcatcacgtgttaaaacaacatctagctcaggttcttgctttcagttagctccttcatctgcattttagtactttgtagggtcatttgacttttagttgaaattgttcaaatcccattctacgcatgtcattttgtcaactatcaacatgattttcttcatgttaccaatattgttggtggtagtttttttggacatcaatcacttatatctctctcacactgttcagtgttcacatttttcgaataatgttttgtggcaatgtctccaactctgcgcgatcgtggagggtaaaattctcatggtgctcctcaataggtaggacttaccagtggcggatccagagcttaaactatggggttcaaggaactccataacttttatctaggcctttaaatgtattcgttaaatatttgatcgtgaacttagttaaatattgtaaaccccaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0167M06.1" temp_strand="-" temp_description="C06HBa0167M06.1  AC211057.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0167M06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="65342" stop="63945"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="65042" g_stop="64247" g_length="796"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="804" r_length="804" r_score="0.945"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64246" i_stop="64177" i_length="70">
            <donor d_prob="0.000" d_score="0.96"/>
            <acceptor a_prob="0.962" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="64176" g_stop="64166" g_length="11"/>
          <reference_exon_boundary r_type="cDNA" r_start="805" r_stop="815" r_length="11" r_score="0.636"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0167M06.1" gen_strand="-" ref_id="SGN-E549524" ref_strand="+">
        <total_alignment_score>0.945</total_alignment_score>
        <cumulative_length_of_scored_exons>807</cumulative_length_of_scored_exons>
        <coverage percentage="0.990" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0167M06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E549524" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="65042" e_stop="64247"/>
          <exon e_start="64176" e_stop="64166"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGGCAATGCATACATTGTTGGCTGCACAACAACTTCAACAGCTCCAGCTACATTCTCATAAGCAACAACACCAGTTTCAGCAACATCAGCTACACCAGTTTCAGCAGCAACAGTTGCAGCACCAACAACAGCAACAGCAACCTCTTATGCAGCAGCAGCAGCAGCAGGATCAACTTTCACAAGCCGGAGATGTGATGTCAAGAGGTTCTCTGTCATCTCCTCAAAATGAAAACGCTTCTGATGTTAGTTCTGTAGCAAAGGATTGAACAGCTGATGGCCAGAGAGACAGGAGATGGTGTATGTTTTAAAAATCATCATGTGTTTTCCCATCTAGCAGCTCATTTTTGTGTTTCAAAATCATCACGTGTTGAAACAACATCTAGCTCAGGTTCTCTTGCTTTCAGTTAGCTCCTTCATCTGCATTTTAGTACTTTTGTAGGGTCATTTGACTTTTAGTTGAAATTGTTCAAATCCCATTCTATGCATATGTCATTTTGTCAACTATCAACATGATTTTCTTCATGTTACCAATATTGTTGGTGGTAGTTTTTTTGGACATCAATCACTTATATCTCTCTCACACTGTTCAGTGTTCACATTTTTCGAATAATGTTTTGT-G----G-------CT-TGCGCGATCGTGGAGGGTAAAATTCTCATGGTGCTCCTCAATAGGTAGGATTTACCAGAGGCGGATCCAGAGCGTAAACTATGGGGTTCAAGGAACTCCATAACTTTTATCTAGGCCTTTAAATGTATTCGTTAAATATTTGATCGTGAACTTGGTTAAATATTGTAATCCCCTATCCCTGTACATAATACTGGTTGGTTCCATCTTATAACTGTCTCTTCTAAATCTGTTATATCATTTCAGAGAAAAAGTTA</genome_strand>
        <mrna_strand>CAGGCAATGCATACATGGTTGGCTGCACAACAACTTCAACAGCTCCAGCTACATTCTCATAAGCAACAACACCAGTTTCAGCAACATCAGCTACACCAGTTTCAGCAGCAACAGTTGCAGCACCAACAACAGCAACAGCAACCTCTTATGCAGCAGCAGCAGCAGCAGGATCAACTTTCACAAGCCGGAGATGTGATGTCAAGAGGTTCTCTGTCATCTCCTCAAAATGAAAATGCTTCTGATGGTAGTTCTGTAGCAAAGGATTGAACAGCTGATGGCCAGAGAGACAGGAGTTGGTGTATGTTTTAAAAAATATCATGTGTTTTCCCATCTAGCAGCTCATTTTTGTGTTTCAAAATCATCACGTGTTAAAACAACATCTAGCTCAGG-T-TCTTGCTTTCAGTTAGCTCCTTCATCTGCATTTTAGTAC-TTTGTAGGGTCATTTGACTTTTAGTTGAAATTGTTCAAATCCCATTCTACGC--ATGTCATTTTGTCAACTATCAACATGATTTTCTTCATGTTACCAATATTGTTGGTGGTAGTTTTTTTGGACATCAATCACTTATATCTCTCTCACACTGTTCAGTGTTCACATTTTTCGAATAATGTTTTGTGGCAATGTCTCCAACTCTGCGCGATCGTGGAGGGTAAAATTCTCATGGTGCTCCTCAATAGGTAGGACTTACCAGTGGCGGATCCAGAGCTTAAACTATGGGGTTCAAGGAACTCCATAACTTTTATCTAGGCCTTTAAATGTATTCGTTAAATATTTGATCGTGAACTTAGTTAAATATTGTAAACCCC......................................................................AAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E327563" ref_strand="-" ref_description="SGN-E327563 [cTOC-20-C14]">
      <seq>tcagctgcaaagcttgctgaacttgctcttatgattcctaaacgtgccaagcggatttgggccaacaggcagtccagctgcaagatcaactttcacaagccggagatgtgatgtcaagaggttctctgtcatctcctcaaaatgaaaacgcttctgatgttagttctgtagcaaaggattgaacagctgatggccagagagacaggagatggtgtatgttttaaaaatcatcatgtgttttcccatctagcagctcatttttgtgtttcaaaatcatcacgtgttgaaacaacatctagctcaggttctcttgctttcagttagctccttcatctgcattttagtacttttgtagggtcatttgacttttagttgaaattgttcaaatcccattctatgcatatgtcattttgtcaactatcaacatgattttcttcatgttaccaatattgttggtggtagtttttttggacatcaatcacttatatctctctcacaaaaaaaaaaaaaaaaaaaaaaactcgaga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0167M06.1" temp_strand="-" temp_description="C06HBa0167M06.1  AC211057.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0167M06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="70975" stop="64160"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="70675" g_stop="70623" g_length="53"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="53" r_length="53" r_score="0.943"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="70622" i_stop="66699" i_length="3924">
            <donor d_prob="1.000" d_score="0.94"/>
            <acceptor a_prob="0.996" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="66698" g_stop="66678" g_length="21"/>
          <reference_exon_boundary r_type="cDNA" r_start="54" r_stop="74" r_length="21" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="66677" i_stop="64884" i_length="1794">
            <donor d_prob="0.000" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="64883" g_stop="64460" g_length="424"/>
          <reference_exon_boundary r_type="cDNA" r_start="75" r_stop="498" r_length="424" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="499" polyA_stop="521"/>
      <MATCH_line gen_id="C06HBa0167M06.1" gen_strand="-" ref_id="SGN-E327563" ref_strand="-">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>498</cumulative_length_of_scored_exons>
        <coverage percentage="0.945" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0167M06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E327563" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="70675" e_stop="70623"/>
          <exon e_start="66698" e_stop="66678"/>
          <exon e_start="64883" e_stop="64460"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAGCTGCAAAGCTTGCTGAACTTGCTCTTATTGATCCTAAACGTGCCAAGCGGTAAGGCTTTCTATGGAAATGTTGTTGCTCATTTACTATAGCAGTCTCTTTAACATTATTTTAGCTTGGCCTTGTCATTATATTTTGCTAAACTGGCACTGCTTAGGATGATACCGTTACGTGGAGGTCTGGTGGCAGACTAGAGTCTCCTAAACTATGAGCCCACTAAATGTGTGCTGGATGTTTAAAGCGGGCTTAGATATTATGCTTCATTGTTTTTTTATGAAAGCCTGCTCTGTTTTGGTGATAATCATTCATTCTGCTGGTGGTTAGGCATTTTATCTGTATTTTTCCTAGCTACTAGCTCCTTGAACTTTTGGATTTTGTTTAATGAAGCAGTTCTTGATGGAACTTCTAAAGGTCTGCCTGCGGCTTCGTCTGCTCCCTTTTCCTGTTCTAAGGCTGCCTCTGGCTGCTTCTGTCATCTTTTGCTGTTCAAAGGTTGAAAAGACTGAAATTATGAGAGTTACAGGAAGGAAAAATTAAAAAGAATAGACTGACCAGGCCCTTCTGTCTCTCTACTCTATCTGTCCAGCAAGTTGTTCCTGCTCCCCGAGCATTTCATTTCAATTTCTTGTCCTCTCCAGCTCTTCCTTGAGCCTACATCTGAACAAGCTCAGCTCCCCAAAAGTTGGTGTGTTCCAAACCACCTTTCAATAACAAATTCCTGCTTTCTTGGGTCCTCTAAATTAGTTAAAGTTAAACCTTTGTTGTTGGCTATGGGGGCCCACTGCCCCTCCCTTACTTTATAGACAATTTAAATTTATCTTCAAGAGGGAGGGGAAGGGTCAGGGAACATATGAGATTGAACACCCAAGGATATGACCTAGTGGCCAATGATGTGGGTGCAAACTCTGGAAACCCGTCCTAACAGAGACAAAAAGACGCTAGGTAATTTCTGGGCATTTGCTTAAGCCTTGCTGGCTGAGTACCCAGTAAGGTAGAAGGTAGCAAGTAGCCGGTGAAATAGTCGAGGTCCCACCATTCTTGTCTGTGCTCCACCTTAATGGAAAAAAAATAAGAGATCAAAAAAACTATGGCCCCTCCAAGGAGTGTGAAGCAGACAATTGTAGCTAATGAAGAAAGGTAAATCAATGGTGGCACATACAGAGAGACTGTGATTGTCCTTACAGGATTAGAGCCAAATACAATTCAAATGGCAGTAGAAATTTTTTTTATAAGGTTACTGGCTTGCACAAATTAGAGAAAAGTTATGGGATGGTTCGGTGTCTTAAGCTTATTTGTTGTCCTAGTCAAACTGTTCTTTTCCGGGTCCCATGCTTTTTTTGCTCAGCGACTTAGCAGTAGGCTAGTAGCTTCATTATGTTTTGTTTTGGTGGGAAAACTTAAATGTTGGTTCATTGCAGATGAAACTATAGTAGTACTTTAGTCTTGGTCTTTCTCCTGATATTAAATTAAGGCTCTTCTTATCTTTTGCTTTCTCGTGTCCTTTTACTTAGCAAAAATATTAAATAGACTTAAGGGAACTATATTACAATGTAGAGTGAGAAAATTGATTAATAGGAGCTGAATAGCAATAATGTTGTTTCTTTTGGACATCTAAGTTTAGTGACTATACTTGTAAATTAAAAACGGTTTTATAGAGTATTATCAAGAGTAAAATAAAGACTTTAGAATGCTAATATGCATGTTAACCAAGCCCGGTTTTATAGAGTTTAGTCAAGATGATTAAAATAAAGACTTTATAGGCGTCCACTATCAGTCAATGAACCAGGTCTCGACTCAGTAAGAACAGAATGTAAGCACAGACAGTAGTTAGCATCCACTATAGTTAACGGACCAGGTCTTGTGACTCAGCAAGAACAATAGCTGAAATAAGTGCAAAAAGTAAATAGCTGAAGGTAAAATTTGCACAAGCACTTTACGTGGAAACCTCCTTGCTCAAGGGAGTAAAACCACGACCTATCACACATGATTTTCAACTGTTTCACTAATCTTCTTTAAGCAAAAGTGAACCGCAGTTACAACCAATGTGAGAAAAAGTTATTAATCTCACGACCAAGTAATAACCTATTACTTGAAGAGTCTAAGCAGATGTTAGTCTGCCCACTAAGCTATCACCACTAGACAAATTAGGATTTGACTAAGCAACACGCAGGTTGCCTACTAAACCACCTAACTAAGCAGCACATACGGCTGCCTACTAAGCTATCACCACTAGACAACTTAGAATTTCAACTAAGCGAATGTCACACCGCCAACTAAATCACCTACCACTAGATAACTTAGAATTTGACTAAGCAACAACAATGTTGCCCTCTAAATCAGTTAGACTCAACTAATTTAGACCTTTTCACAAACCAAACTATCTGAATCCTTTATAGACTAGGAACAAGTTTACAATATATGGACGAAAATATAACTCCTAAGACACACTCTAATGCTTGCAACTTGATCAGGTCCTTGTTGTGTTTGCCGGAGAATACTTCACCAAAATGGTCTTTGCTTGTATACTTCAGAAGTTTCAAGATGCAAAAAAACTATAAATGAAAGAGACAAACTCAAACTCAACAAAGATGCTTCAACACTTTATAGATCTTTTTGATGAGTATGAGTATTGTTCTTTCTTGAAGATGGCTTTTTCCTTTTAACCTTGTGAGTTTTAATTTGCCAAAATCTTGTGTTTGTGTTTTGGAGAAGAGATTGTATCACCATGAACACAAACTCTTGGGACAAAGCTATTGGCCGAGAGTACGCTGTCATGAAAAGTTGTGCACCAACCACATCAGGGTTGACAACTTTTTGATAGTTGTCTTTTCGTCCTTTTCTCGTACGTAGAGTTTTCGGGACCAGGTCCCTTGCTGCGTTCTTTAATGCTTGAGTTCTTTGACAAAAGACTTGCTGACTTTTTCTCTTCTTGAATGAATGAACTTAATATGTTGTTTGTCATGTTGAATGTATCAACTCCATTTTGATTGGTTCAGTATGCTGGCGCCTCACCTACCACTGACAGGACAACTTTACAATTGTACACCATTATTGGTGCAGTACGCTGCACTTTTTACCTACCATCTGACATGGCATCTTTTTAGCTGTTCCCAGGATGAATTCGGACATTCTGCCAGGGGCCCGGTCCCTGCATTTGTGAGGATCATCAAAACATCTAGAATATTATATTTTCTCCCTTTTTGATGATTACACACAAATGTTCCTCACATTGAGTTTATTCATTAAGTTGCCCTGTCATCAGTCCCAATAACAAGGATCTGTGTCCCTTGTTAGATCAATAAGTTTATTAAATCATCAAAACTTAACATTAGCTCCAAAATAATATTTACCAACTCCATGAATGGTAAGGCAAAGTATAAGAACAATGAACATGTCTATTCACTATGACAAATAGAAAATTATTTTGAAATCCTCGACCAATCTATAAGAAAATACTTTTAATTTCTTCTGCTCAAACAGTAAATTATAGAAATTAGAAACTAGTACCATATGAGAATGGAGAAGTTTAAAAAGGTTATATAAATGAAGGATGTATATCCCAAGCTAGTGGTTCATTCGCTAAATCTATCAGAGAAAAAGATGGATGGTTTGTAAACAGTCCTTTTACCTTTTGGCTATGCTATTACTTGAAGTGGTGCTGAGGTTTGCTGTCTCCAGTCTGAAACCATTTCTCTATGTATCCATGAGGCCTTCTTTTTCCTGTCTTTTGCTCTCTTTTTAATCAGACAAATCATTAAGTTTGCTAAATACTGTTACTAGCAAAAAAAGGTTTCTTGTTGCTATCTAAGTCTTTGCACAGCTTTCTGAAAGTATTCATAGTGCATTGATGTAGGAGATCCACCTGTTTTAAGGTCTTTTGTGTTCCTTGAATTTGTTTGAATTTGTCTGATGTAGTTGTTTAAAAGTTAAGCCAATTAGTTAATCATCACTGTATTTGCTTATGCTGTGCAATAGGATTTGGGCCAACAGGCAGTCAGCTGCAAGATCAAAGGAAAGGAAAATGAGATATATAGCAGAGCTTGAGAGAAAAGTTCAGACTCTGCAAACGGAAGCAACTACTTTATCTACTCAGTTGACCCTATTGCAGGTGTATATCAGTTTCTCTCATTACTCAGTTATTTTTTGTGTTCTTTCCTCTTTTTATTTCTGTTGTTTTCTGTTATTGGAAACATGTCTAGTGTGGTTGAAGTGATGGAAGTAGATAAGTTCTTGGTCTAGAATCTGCAGCATTTGCTTGCACATGGAAAAATGTGCAGATATATGTATCTTCAGCCTTTTTCTCACGTATAACATAAGACTATTGGTTTTGATTTGCCTTTTTTTTTCTCCATATGAAACAGAGAGATACAAACGGCCTGAATGCTGAAAACAGTGAACTTAAACTGCGTTTACAAACAATGGAACAACAGGTTCACTTGCAAGATGGTAAGAATCTGAGCATGACTTCTTTTAGTAAACTTTTTGCCCATAACCCACCTCCTCTTTTTATCTGTCTGAACAATGGTTGCCGTTTCTCAATGGCATCTAGAGTGACTTTAGTTCAAGTGTTCGACCATTTAAGATGATTCAAAGTGGATTTGTTGTCAACCGCAAGTTAATATCTGGCTGTATTTAGGCTTCGTTGGTTTCAAGAATTTCCTCAATTTCAGAAGAAAGTAAAAATCAATTTTGATATACTTGATCATTTTCACATTGGGTGTGTTAACTGCGTTTTTTGTGGTTAAAAATAAAGTAATTCTGCCATATTCTCATCTTATGGTACAAAAACCGAGATAACATGAATTCCAGTTTGACCTTACAAGGTCAAACATAGTTTAAATTTGGACCGGGTTGACGTAGATATAGGAATACAATATATAGTCCAAATAATTTTGAAGTTGGTACTTTTTGAATTCTAATAGTTGTACTGGAGGTTAGATTTCAGATGTTAGAACTTCAAAAGCTTTTGTTTCTCATAACATTATCCTGTGGTTATAGAAGTGAACATTGAGAAATTCATATTGTTAGTGTCATGATTGGCACCCATGTATTAGGTAATATTCTGTTTAATCCGTAAAAAATCTTGATAAGTATGTCAGTGTTAAGAAATGTGAGGAAGTTATCAATAAGGTGGTTAGGAGACACCGAGAGGCTGCTAATCACCTTGTAGGTTCTTGAAACCATTGAAATTTTCAATGATCATATTTCAACCAGAACCTTGTTTTTCTGCTCTCCGTGAACAATGCAATTAGGCAGATAAGAACTTCTTCAGTCAAATTCCGCTTGCAACTCTATGTGGATAATGGATTTAGCACCTGACTACTGAGTAACATATGCCTAGGGAAAACACTTCCATGAGATTGCTAGAGTTGCATATGTAATTTCCTTGGATAGGAATTTGTGAACAACTAATTCATCTCTACCAATTAGTTGGAGTTTTTTGTGTAGAGTTGCTAATAGGTATTTTGATCTGTTTCTTCTTCTTCTTCTTTCTATGTAGCGTTGAATGATGCTTTAAAGGAGGAGATACAGCATCTGAAAGTGCTAACTGGGCAAGGCATAGCAAATGGTGGACCTATGATGAACTTCCCAGCAACCTTTGGAGGCAATCAGCAGTTCTACTCTAACAACCAGGCAATGCATACATTGTTGGCTGCACAACAACTTCAACAGCTCCAGCTACATTCTCATAAGCAACAACACCAGTTTCAGCAACATCAGCTACACCAGTTTCAGCAGCAACAGTTGCAGCACCAACAACAGCAACAGCAACCTCTTATGCAGCAGCAGCAGCAGCAGGATCAACTTTCACAAGCCGGAGATGTGATGTCAAGAGGTTCTCTGTCATCTCCTCAAAATGAAAACGCTTCTGATGTTAGTTCTGTAGCAAAGGATTGAACAGCTGATGGCCAGAGAGACAGGAGATGGTGTATGTTTTAAAAATCATCATGTGTTTTCCCATCTAGCAGCTCATTTTTGTGTTTCAAAATCATCACGTGTTGAAACAACATCTAGCTCAGGTTCTCTTGCTTTCAGTTAGCTCCTTCATCTGCATTTTAGTACTTTTGTAGGGTCATTTGACTTTTAGTTGAAATTGTTCAAATCCCATTCTATGCATATGTCATTTTGTCAACTATCAACATGATTTTCTTCATGTTACCAATATTGTTGGTGGTAGTTTTTTTGGACATCAATCACTTATATCTCTCTCACA</genome_strand>
        <mrna_strand>TCAGCTGCAAAGCTTGCTGAACTTGCTCTTATGATTCCTAAACGTGCCAAGCG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTTGGGCCAACAGGCAGTC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCTGCAAGATCAACTTTCACAAGCCGGAGATGTGATGTCAAGAGGTTCTCTGTCATCTCCTCAAAATGAAAACGCTTCTGATGTTAGTTCTGTAGCAAAGGATTGAACAGCTGATGGCCAGAGAGACAGGAGATGGTGTATGTTTTAAAAATCATCATGTGTTTTCCCATCTAGCAGCTCATTTTTGTGTTTCAAAATCATCACGTGTTGAAACAACATCTAGCTCAGGTTCTCTTGCTTTCAGTTAGCTCCTTCATCTGCATTTTAGTACTTTTGTAGGGTCATTTGACTTTTAGTTGAAATTGTTCAAATCCCATTCTATGCATATGTCATTTTGTCAACTATCAACATGATTTTCTTCATGTTACCAATATTGTTGGTGGTAGTTTTTTTGGACATCAATCACTTATATCTCTCTCACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E366969" ref_strand="+" ref_description="SGN-E366969 [cLPT-6-K6]">
      <seq>tgaattccaagtgggtgagtcttcttcagctgccccaggttcatcacaaacaccagcaatggcttcaggaacaaataaatttgctcctactgttagtgagaagccaagagttagacatcagcatagccagtccatggatggttcaactacaatcaagccagagatgctcatgtcaggagtggaagagccttcttcagctgaaactaagaaagccacgtcagctgcaaagcttgctgaacttgctcttattgatcctaaacgtgccaagcggatttgggccaacaggcagtcagctgcaagatcaaaggaaaggaaaatgagatatatagcagagcttgagagaaaagttcagactctgcaaacggaagcaactactttatctactcagttgaccctattgcagagagatacaaatggcctgaatgctgaaaacagtgaacttaaactgcgtttacaaacaatggaacaacaggttcacttgcaagatgcgttgaatgatgctttaaaggaggagatacagcatctgaaagtgctaactggacaaggcatagcaaatggtggacctatgatgaacttcccagcaacctttggaggcaatcagcagttctactctaacaaccaggcaatgcataca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0167M06.1" temp_strand="-" temp_description="C06HBa0167M06.1  AC211057.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0167M06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="71192" stop="64728"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="70892" g_stop="70623" g_length="270"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="270" r_length="270" r_score="0.993"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="70622" i_stop="66699" i_length="3924">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="66698" g_stop="66566" g_length="133"/>
          <reference_exon_boundary r_type="cDNA" r_start="271" r_stop="403" r_length="133" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="66565" i_stop="66313" i_length="253">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="66312" g_stop="66228" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="404" r_stop="488" r_length="85" r_score="0.988"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="66227" i_stop="65174" i_length="1054">
            <donor d_prob="0.867" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="65173" g_stop="65028" g_length="146"/>
          <reference_exon_boundary r_type="cDNA" r_start="489" r_stop="634" r_length="146" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0167M06.1" gen_strand="-" ref_id="SGN-E366969" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>634</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0167M06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E366969" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="70892" e_stop="70623"/>
          <exon e_start="66698" e_stop="66566"/>
          <exon e_start="66312" e_stop="66228"/>
          <exon e_start="65173" e_stop="65028"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAATTCCAAGTGGGTGAGTCTTCTTCAGCTGCTCCAGGTTCATCACAAACAACAGCAATGGCTTCAGGAACAAATAAATTTGCTCCTACTGTTAGTGAGAAGCCAAGAGTTAGACATCAGCATAGCCAGTCCATGGATGGTTCAACTACAATCAAGCCAGAGATGCTCATGTCAGGAGTGGAAGAGCCTTCTTCAGCTGAAACTAAGAAAGCCACGTCAGCTGCAAAGCTTGCTGAACTTGCTCTTATTGATCCTAAACGTGCCAAGCGGTAAGGCTTTCTATGGAAATGTTGTTGCTCATTTACTATAGCAGTCTCTTTAACATTATTTTAGCTTGGCCTTGTCATTATATTTTGCTAAACTGGCACTGCTTAGGATGATACCGTTACGTGGAGGTCTGGTGGCAGACTAGAGTCTCCTAAACTATGAGCCCACTAAATGTGTGCTGGATGTTTAAAGCGGGCTTAGATATTATGCTTCATTGTTTTTTTATGAAAGCCTGCTCTGTTTTGGTGATAATCATTCATTCTGCTGGTGGTTAGGCATTTTATCTGTATTTTTCCTAGCTACTAGCTCCTTGAACTTTTGGATTTTGTTTAATGAAGCAGTTCTTGATGGAACTTCTAAAGGTCTGCCTGCGGCTTCGTCTGCTCCCTTTTCCTGTTCTAAGGCTGCCTCTGGCTGCTTCTGTCATCTTTTGCTGTTCAAAGGTTGAAAAGACTGAAATTATGAGAGTTACAGGAAGGAAAAATTAAAAAGAATAGACTGACCAGGCCCTTCTGTCTCTCTACTCTATCTGTCCAGCAAGTTGTTCCTGCTCCCCGAGCATTTCATTTCAATTTCTTGTCCTCTCCAGCTCTTCCTTGAGCCTACATCTGAACAAGCTCAGCTCCCCAAAAGTTGGTGTGTTCCAAACCACCTTTCAATAACAAATTCCTGCTTTCTTGGGTCCTCTAAATTAGTTAAAGTTAAACCTTTGTTGTTGGCTATGGGGGCCCACTGCCCCTCCCTTACTTTATAGACAATTTAAATTTATCTTCAAGAGGGAGGGGAAGGGTCAGGGAACATATGAGATTGAACACCCAAGGATATGACCTAGTGGCCAATGATGTGGGTGCAAACTCTGGAAACCCGTCCTAACAGAGACAAAAAGACGCTAGGTAATTTCTGGGCATTTGCTTAAGCCTTGCTGGCTGAGTACCCAGTAAGGTAGAAGGTAGCAAGTAGCCGGTGAAATAGTCGAGGTCCCACCATTCTTGTCTGTGCTCCACCTTAATGGAAAAAAAATAAGAGATCAAAAAAACTATGGCCCCTCCAAGGAGTGTGAAGCAGACAATTGTAGCTAATGAAGAAAGGTAAATCAATGGTGGCACATACAGAGAGACTGTGATTGTCCTTACAGGATTAGAGCCAAATACAATTCAAATGGCAGTAGAAATTTTTTTTATAAGGTTACTGGCTTGCACAAATTAGAGAAAAGTTATGGGATGGTTCGGTGTCTTAAGCTTATTTGTTGTCCTAGTCAAACTGTTCTTTTCCGGGTCCCATGCTTTTTTTGCTCAGCGACTTAGCAGTAGGCTAGTAGCTTCATTATGTTTTGTTTTGGTGGGAAAACTTAAATGTTGGTTCATTGCAGATGAAACTATAGTAGTACTTTAGTCTTGGTCTTTCTCCTGATATTAAATTAAGGCTCTTCTTATCTTTTGCTTTCTCGTGTCCTTTTACTTAGCAAAAATATTAAATAGACTTAAGGGAACTATATTACAATGTAGAGTGAGAAAATTGATTAATAGGAGCTGAATAGCAATAATGTTGTTTCTTTTGGACATCTAAGTTTAGTGACTATACTTGTAAATTAAAAACGGTTTTATAGAGTATTATCAAGAGTAAAATAAAGACTTTAGAATGCTAATATGCATGTTAACCAAGCCCGGTTTTATAGAGTTTAGTCAAGATGATTAAAATAAAGACTTTATAGGCGTCCACTATCAGTCAATGAACCAGGTCTCGACTCAGTAAGAACAGAATGTAAGCACAGACAGTAGTTAGCATCCACTATAGTTAACGGACCAGGTCTTGTGACTCAGCAAGAACAATAGCTGAAATAAGTGCAAAAAGTAAATAGCTGAAGGTAAAATTTGCACAAGCACTTTACGTGGAAACCTCCTTGCTCAAGGGAGTAAAACCACGACCTATCACACATGATTTTCAACTGTTTCACTAATCTTCTTTAAGCAAAAGTGAACCGCAGTTACAACCAATGTGAGAAAAAGTTATTAATCTCACGACCAAGTAATAACCTATTACTTGAAGAGTCTAAGCAGATGTTAGTCTGCCCACTAAGCTATCACCACTAGACAAATTAGGATTTGACTAAGCAACACGCAGGTTGCCTACTAAACCACCTAACTAAGCAGCACATACGGCTGCCTACTAAGCTATCACCACTAGACAACTTAGAATTTCAACTAAGCGAATGTCACACCGCCAACTAAATCACCTACCACTAGATAACTTAGAATTTGACTAAGCAACAACAATGTTGCCCTCTAAATCAGTTAGACTCAACTAATTTAGACCTTTTCACAAACCAAACTATCTGAATCCTTTATAGACTAGGAACAAGTTTACAATATATGGACGAAAATATAACTCCTAAGACACACTCTAATGCTTGCAACTTGATCAGGTCCTTGTTGTGTTTGCCGGAGAATACTTCACCAAAATGGTCTTTGCTTGTATACTTCAGAAGTTTCAAGATGCAAAAAAACTATAAATGAAAGAGACAAACTCAAACTCAACAAAGATGCTTCAACACTTTATAGATCTTTTTGATGAGTATGAGTATTGTTCTTTCTTGAAGATGGCTTTTTCCTTTTAACCTTGTGAGTTTTAATTTGCCAAAATCTTGTGTTTGTGTTTTGGAGAAGAGATTGTATCACCATGAACACAAACTCTTGGGACAAAGCTATTGGCCGAGAGTACGCTGTCATGAAAAGTTGTGCACCAACCACATCAGGGTTGACAACTTTTTGATAGTTGTCTTTTCGTCCTTTTCTCGTACGTAGAGTTTTCGGGACCAGGTCCCTTGCTGCGTTCTTTAATGCTTGAGTTCTTTGACAAAAGACTTGCTGACTTTTTCTCTTCTTGAATGAATGAACTTAATATGTTGTTTGTCATGTTGAATGTATCAACTCCATTTTGATTGGTTCAGTATGCTGGCGCCTCACCTACCACTGACAGGACAACTTTACAATTGTACACCATTATTGGTGCAGTACGCTGCACTTTTTACCTACCATCTGACATGGCATCTTTTTAGCTGTTCCCAGGATGAATTCGGACATTCTGCCAGGGGCCCGGTCCCTGCATTTGTGAGGATCATCAAAACATCTAGAATATTATATTTTCTCCCTTTTTGATGATTACACACAAATGTTCCTCACATTGAGTTTATTCATTAAGTTGCCCTGTCATCAGTCCCAATAACAAGGATCTGTGTCCCTTGTTAGATCAATAAGTTTATTAAATCATCAAAACTTAACATTAGCTCCAAAATAATATTTACCAACTCCATGAATGGTAAGGCAAAGTATAAGAACAATGAACATGTCTATTCACTATGACAAATAGAAAATTATTTTGAAATCCTCGACCAATCTATAAGAAAATACTTTTAATTTCTTCTGCTCAAACAGTAAATTATAGAAATTAGAAACTAGTACCATATGAGAATGGAGAAGTTTAAAAAGGTTATATAAATGAAGGATGTATATCCCAAGCTAGTGGTTCATTCGCTAAATCTATCAGAGAAAAAGATGGATGGTTTGTAAACAGTCCTTTTACCTTTTGGCTATGCTATTACTTGAAGTGGTGCTGAGGTTTGCTGTCTCCAGTCTGAAACCATTTCTCTATGTATCCATGAGGCCTTCTTTTTCCTGTCTTTTGCTCTCTTTTTAATCAGACAAATCATTAAGTTTGCTAAATACTGTTACTAGCAAAAAAAGGTTTCTTGTTGCTATCTAAGTCTTTGCACAGCTTTCTGAAAGTATTCATAGTGCATTGATGTAGGAGATCCACCTGTTTTAAGGTCTTTTGTGTTCCTTGAATTTGTTTGAATTTGTCTGATGTAGTTGTTTAAAAGTTAAGCCAATTAGTTAATCATCACTGTATTTGCTTATGCTGTGCAATAGGATTTGGGCCAACAGGCAGTCAGCTGCAAGATCAAAGGAAAGGAAAATGAGATATATAGCAGAGCTTGAGAGAAAAGTTCAGACTCTGCAAACGGAAGCAACTACTTTATCTACTCAGTTGACCCTATTGCAGGTGTATATCAGTTTCTCTCATTACTCAGTTATTTTTTGTGTTCTTTCCTCTTTTTATTTCTGTTGTTTTCTGTTATTGGAAACATGTCTAGTGTGGTTGAAGTGATGGAAGTAGATAAGTTCTTGGTCTAGAATCTGCAGCATTTGCTTGCACATGGAAAAATGTGCAGATATATGTATCTTCAGCCTTTTTCTCACGTATAACATAAGACTATTGGTTTTGATTTGCCTTTTTTTTTCTCCATATGAAACAGAGAGATACAAACGGCCTGAATGCTGAAAACAGTGAACTTAAACTGCGTTTACAAACAATGGAACAACAGGTTCACTTGCAAGATGGTAAGAATCTGAGCATGACTTCTTTTAGTAAACTTTTTGCCCATAACCCACCTCCTCTTTTTATCTGTCTGAACAATGGTTGCCGTTTCTCAATGGCATCTAGAGTGACTTTAGTTCAAGTGTTCGACCATTTAAGATGATTCAAAGTGGATTTGTTGTCAACCGCAAGTTAATATCTGGCTGTATTTAGGCTTCGTTGGTTTCAAGAATTTCCTCAATTTCAGAAGAAAGTAAAAATCAATTTTGATATACTTGATCATTTTCACATTGGGTGTGTTAACTGCGTTTTTTGTGGTTAAAAATAAAGTAATTCTGCCATATTCTCATCTTATGGTACAAAAACCGAGATAACATGAATTCCAGTTTGACCTTACAAGGTCAAACATAGTTTAAATTTGGACCGGGTTGACGTAGATATAGGAATACAATATATAGTCCAAATAATTTTGAAGTTGGTACTTTTTGAATTCTAATAGTTGTACTGGAGGTTAGATTTCAGATGTTAGAACTTCAAAAGCTTTTGTTTCTCATAACATTATCCTGTGGTTATAGAAGTGAACATTGAGAAATTCATATTGTTAGTGTCATGATTGGCACCCATGTATTAGGTAATATTCTGTTTAATCCGTAAAAAATCTTGATAAGTATGTCAGTGTTAAGAAATGTGAGGAAGTTATCAATAAGGTGGTTAGGAGACACCGAGAGGCTGCTAATCACCTTGTAGGTTCTTGAAACCATTGAAATTTTCAATGATCATATTTCAACCAGAACCTTGTTTTTCTGCTCTCCGTGAACAATGCAATTAGGCAGATAAGAACTTCTTCAGTCAAATTCCGCTTGCAACTCTATGTGGATAATGGATTTAGCACCTGACTACTGAGTAACATATGCCTAGGGAAAACACTTCCATGAGATTGCTAGAGTTGCATATGTAATTTCCTTGGATAGGAATTTGTGAACAACTAATTCATCTCTACCAATTAGTTGGAGTTTTTTGTGTAGAGTTGCTAATAGGTATTTTGATCTGTTTCTTCTTCTTCTTCTTTCTATGTAGCGTTGAATGATGCTTTAAAGGAGGAGATACAGCATCTGAAAGTGCTAACTGGGCAAGGCATAGCAAATGGTGGACCTATGATGAACTTCCCAGCAACCTTTGGAGGCAATCAGCAGTTCTACTCTAACAACCAGGCAATGCATACA</genome_strand>
        <mrna_strand>TGAATTCCAAGTGGGTGAGTCTTCTTCAGCTGCCCCAGGTTCATCACAAACACCAGCAATGGCTTCAGGAACAAATAAATTTGCTCCTACTGTTAGTGAGAAGCCAAGAGTTAGACATCAGCATAGCCAGTCCATGGATGGTTCAACTACAATCAAGCCAGAGATGCTCATGTCAGGAGTGGAAGAGCCTTCTTCAGCTGAAACTAAGAAAGCCACGTCAGCTGCAAAGCTTGCTGAACTTGCTCTTATTGATCCTAAACGTGCCAAGCG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTTGGGCCAACAGGCAGTCAGCTGCAAGATCAAAGGAAAGGAAAATGAGATATATAGCAGAGCTTGAGAGAAAAGTTCAGACTCTGCAAACGGAAGCAACTACTTTATCTACTCAGTTGACCCTATTGCAG.............................................................................................................................................................................................................................................................AGAGATACAAATGGCCTGAATGCTGAAAACAGTGAACTTAAACTGCGTTTACAAACAATGGAACAACAGGTTCACTTGCAAGATG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTTGAATGATGCTTTAAAGGAGGAGATACAGCATCTGAAAGTGCTAACTGGACAAGGCATAGCAAATGGTGGACCTATGATGAACTTCCCAGCAACCTTTGGAGGCAATCAGCAGTTCTACTCTAACAACCAGGCAATGCATACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E311853" ref_strand="+" ref_description="SGN-E311853 [cTOA-15-E12]">
      <seq>agaaagccacgtcagctgcaaagcttgctgaacttgctcttattgatcctaaacgtgccaagcggatttgggccaacaggcagtcagctgcaagatcaaaggaaaggaaaatgagatatatagcagagcttgagagaaaagttcagactctgcaaacggaagcaactactttatctactcagttgaccctattgcagagagatacaaacggcctgaatgctgaaaacagtgaacttaaactgcgtttacaaacaatggaacaacaggttcacttgcaagatgcgttgaatgatgctttaaaggaggagatacagcatctgaaagtgctaactgggcaaggcatagcaaatggtggacctatgatgaacttcccagcaacctttggaggcaatcagcagttctactc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0167M06.1" temp_strand="-" temp_description="C06HBa0167M06.1  AC211057.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0167M06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="70986" stop="64750"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="70686" g_stop="70623" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="64" r_length="64" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="70622" i_stop="66699" i_length="3924">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="66698" g_stop="66566" g_length="133"/>
          <reference_exon_boundary r_type="cDNA" r_start="65" r_stop="197" r_length="133" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="66565" i_stop="66313" i_length="253">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="66312" g_stop="66228" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="198" r_stop="282" r_length="85" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="66227" i_stop="65174" i_length="1054">
            <donor d_prob="0.867" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="65173" g_stop="65050" g_length="124"/>
          <reference_exon_boundary r_type="cDNA" r_start="283" r_stop="406" r_length="124" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0167M06.1" gen_strand="-" ref_id="SGN-E311853" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>406</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0167M06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E311853" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="70686" e_stop="70623"/>
          <exon e_start="66698" e_stop="66566"/>
          <exon e_start="66312" e_stop="66228"/>
          <exon e_start="65173" e_stop="65050"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAAGCCACGTCAGCTGCAAAGCTTGCTGAACTTGCTCTTATTGATCCTAAACGTGCCAAGCGGTAAGGCTTTCTATGGAAATGTTGTTGCTCATTTACTATAGCAGTCTCTTTAACATTATTTTAGCTTGGCCTTGTCATTATATTTTGCTAAACTGGCACTGCTTAGGATGATACCGTTACGTGGAGGTCTGGTGGCAGACTAGAGTCTCCTAAACTATGAGCCCACTAAATGTGTGCTGGATGTTTAAAGCGGGCTTAGATATTATGCTTCATTGTTTTTTTATGAAAGCCTGCTCTGTTTTGGTGATAATCATTCATTCTGCTGGTGGTTAGGCATTTTATCTGTATTTTTCCTAGCTACTAGCTCCTTGAACTTTTGGATTTTGTTTAATGAAGCAGTTCTTGATGGAACTTCTAAAGGTCTGCCTGCGGCTTCGTCTGCTCCCTTTTCCTGTTCTAAGGCTGCCTCTGGCTGCTTCTGTCATCTTTTGCTGTTCAAAGGTTGAAAAGACTGAAATTATGAGAGTTACAGGAAGGAAAAATTAAAAAGAATAGACTGACCAGGCCCTTCTGTCTCTCTACTCTATCTGTCCAGCAAGTTGTTCCTGCTCCCCGAGCATTTCATTTCAATTTCTTGTCCTCTCCAGCTCTTCCTTGAGCCTACATCTGAACAAGCTCAGCTCCCCAAAAGTTGGTGTGTTCCAAACCACCTTTCAATAACAAATTCCTGCTTTCTTGGGTCCTCTAAATTAGTTAAAGTTAAACCTTTGTTGTTGGCTATGGGGGCCCACTGCCCCTCCCTTACTTTATAGACAATTTAAATTTATCTTCAAGAGGGAGGGGAAGGGTCAGGGAACATATGAGATTGAACACCCAAGGATATGACCTAGTGGCCAATGATGTGGGTGCAAACTCTGGAAACCCGTCCTAACAGAGACAAAAAGACGCTAGGTAATTTCTGGGCATTTGCTTAAGCCTTGCTGGCTGAGTACCCAGTAAGGTAGAAGGTAGCAAGTAGCCGGTGAAATAGTCGAGGTCCCACCATTCTTGTCTGTGCTCCACCTTAATGGAAAAAAAATAAGAGATCAAAAAAACTATGGCCCCTCCAAGGAGTGTGAAGCAGACAATTGTAGCTAATGAAGAAAGGTAAATCAATGGTGGCACATACAGAGAGACTGTGATTGTCCTTACAGGATTAGAGCCAAATACAATTCAAATGGCAGTAGAAATTTTTTTTATAAGGTTACTGGCTTGCACAAATTAGAGAAAAGTTATGGGATGGTTCGGTGTCTTAAGCTTATTTGTTGTCCTAGTCAAACTGTTCTTTTCCGGGTCCCATGCTTTTTTTGCTCAGCGACTTAGCAGTAGGCTAGTAGCTTCATTATGTTTTGTTTTGGTGGGAAAACTTAAATGTTGGTTCATTGCAGATGAAACTATAGTAGTACTTTAGTCTTGGTCTTTCTCCTGATATTAAATTAAGGCTCTTCTTATCTTTTGCTTTCTCGTGTCCTTTTACTTAGCAAAAATATTAAATAGACTTAAGGGAACTATATTACAATGTAGAGTGAGAAAATTGATTAATAGGAGCTGAATAGCAATAATGTTGTTTCTTTTGGACATCTAAGTTTAGTGACTATACTTGTAAATTAAAAACGGTTTTATAGAGTATTATCAAGAGTAAAATAAAGACTTTAGAATGCTAATATGCATGTTAACCAAGCCCGGTTTTATAGAGTTTAGTCAAGATGATTAAAATAAAGACTTTATAGGCGTCCACTATCAGTCAATGAACCAGGTCTCGACTCAGTAAGAACAGAATGTAAGCACAGACAGTAGTTAGCATCCACTATAGTTAACGGACCAGGTCTTGTGACTCAGCAAGAACAATAGCTGAAATAAGTGCAAAAAGTAAATAGCTGAAGGTAAAATTTGCACAAGCACTTTACGTGGAAACCTCCTTGCTCAAGGGAGTAAAACCACGACCTATCACACATGATTTTCAACTGTTTCACTAATCTTCTTTAAGCAAAAGTGAACCGCAGTTACAACCAATGTGAGAAAAAGTTATTAATCTCACGACCAAGTAATAACCTATTACTTGAAGAGTCTAAGCAGATGTTAGTCTGCCCACTAAGCTATCACCACTAGACAAATTAGGATTTGACTAAGCAACACGCAGGTTGCCTACTAAACCACCTAACTAAGCAGCACATACGGCTGCCTACTAAGCTATCACCACTAGACAACTTAGAATTTCAACTAAGCGAATGTCACACCGCCAACTAAATCACCTACCACTAGATAACTTAGAATTTGACTAAGCAACAACAATGTTGCCCTCTAAATCAGTTAGACTCAACTAATTTAGACCTTTTCACAAACCAAACTATCTGAATCCTTTATAGACTAGGAACAAGTTTACAATATATGGACGAAAATATAACTCCTAAGACACACTCTAATGCTTGCAACTTGATCAGGTCCTTGTTGTGTTTGCCGGAGAATACTTCACCAAAATGGTCTTTGCTTGTATACTTCAGAAGTTTCAAGATGCAAAAAAACTATAAATGAAAGAGACAAACTCAAACTCAACAAAGATGCTTCAACACTTTATAGATCTTTTTGATGAGTATGAGTATTGTTCTTTCTTGAAGATGGCTTTTTCCTTTTAACCTTGTGAGTTTTAATTTGCCAAAATCTTGTGTTTGTGTTTTGGAGAAGAGATTGTATCACCATGAACACAAACTCTTGGGACAAAGCTATTGGCCGAGAGTACGCTGTCATGAAAAGTTGTGCACCAACCACATCAGGGTTGACAACTTTTTGATAGTTGTCTTTTCGTCCTTTTCTCGTACGTAGAGTTTTCGGGACCAGGTCCCTTGCTGCGTTCTTTAATGCTTGAGTTCTTTGACAAAAGACTTGCTGACTTTTTCTCTTCTTGAATGAATGAACTTAATATGTTGTTTGTCATGTTGAATGTATCAACTCCATTTTGATTGGTTCAGTATGCTGGCGCCTCACCTACCACTGACAGGACAACTTTACAATTGTACACCATTATTGGTGCAGTACGCTGCACTTTTTACCTACCATCTGACATGGCATCTTTTTAGCTGTTCCCAGGATGAATTCGGACATTCTGCCAGGGGCCCGGTCCCTGCATTTGTGAGGATCATCAAAACATCTAGAATATTATATTTTCTCCCTTTTTGATGATTACACACAAATGTTCCTCACATTGAGTTTATTCATTAAGTTGCCCTGTCATCAGTCCCAATAACAAGGATCTGTGTCCCTTGTTAGATCAATAAGTTTATTAAATCATCAAAACTTAACATTAGCTCCAAAATAATATTTACCAACTCCATGAATGGTAAGGCAAAGTATAAGAACAATGAACATGTCTATTCACTATGACAAATAGAAAATTATTTTGAAATCCTCGACCAATCTATAAGAAAATACTTTTAATTTCTTCTGCTCAAACAGTAAATTATAGAAATTAGAAACTAGTACCATATGAGAATGGAGAAGTTTAAAAAGGTTATATAAATGAAGGATGTATATCCCAAGCTAGTGGTTCATTCGCTAAATCTATCAGAGAAAAAGATGGATGGTTTGTAAACAGTCCTTTTACCTTTTGGCTATGCTATTACTTGAAGTGGTGCTGAGGTTTGCTGTCTCCAGTCTGAAACCATTTCTCTATGTATCCATGAGGCCTTCTTTTTCCTGTCTTTTGCTCTCTTTTTAATCAGACAAATCATTAAGTTTGCTAAATACTGTTACTAGCAAAAAAAGGTTTCTTGTTGCTATCTAAGTCTTTGCACAGCTTTCTGAAAGTATTCATAGTGCATTGATGTAGGAGATCCACCTGTTTTAAGGTCTTTTGTGTTCCTTGAATTTGTTTGAATTTGTCTGATGTAGTTGTTTAAAAGTTAAGCCAATTAGTTAATCATCACTGTATTTGCTTATGCTGTGCAATAGGATTTGGGCCAACAGGCAGTCAGCTGCAAGATCAAAGGAAAGGAAAATGAGATATATAGCAGAGCTTGAGAGAAAAGTTCAGACTCTGCAAACGGAAGCAACTACTTTATCTACTCAGTTGACCCTATTGCAGGTGTATATCAGTTTCTCTCATTACTCAGTTATTTTTTGTGTTCTTTCCTCTTTTTATTTCTGTTGTTTTCTGTTATTGGAAACATGTCTAGTGTGGTTGAAGTGATGGAAGTAGATAAGTTCTTGGTCTAGAATCTGCAGCATTTGCTTGCACATGGAAAAATGTGCAGATATATGTATCTTCAGCCTTTTTCTCACGTATAACATAAGACTATTGGTTTTGATTTGCCTTTTTTTTTCTCCATATGAAACAGAGAGATACAAACGGCCTGAATGCTGAAAACAGTGAACTTAAACTGCGTTTACAAACAATGGAACAACAGGTTCACTTGCAAGATGGTAAGAATCTGAGCATGACTTCTTTTAGTAAACTTTTTGCCCATAACCCACCTCCTCTTTTTATCTGTCTGAACAATGGTTGCCGTTTCTCAATGGCATCTAGAGTGACTTTAGTTCAAGTGTTCGACCATTTAAGATGATTCAAAGTGGATTTGTTGTCAACCGCAAGTTAATATCTGGCTGTATTTAGGCTTCGTTGGTTTCAAGAATTTCCTCAATTTCAGAAGAAAGTAAAAATCAATTTTGATATACTTGATCATTTTCACATTGGGTGTGTTAACTGCGTTTTTTGTGGTTAAAAATAAAGTAATTCTGCCATATTCTCATCTTATGGTACAAAAACCGAGATAACATGAATTCCAGTTTGACCTTACAAGGTCAAACATAGTTTAAATTTGGACCGGGTTGACGTAGATATAGGAATACAATATATAGTCCAAATAATTTTGAAGTTGGTACTTTTTGAATTCTAATAGTTGTACTGGAGGTTAGATTTCAGATGTTAGAACTTCAAAAGCTTTTGTTTCTCATAACATTATCCTGTGGTTATAGAAGTGAACATTGAGAAATTCATATTGTTAGTGTCATGATTGGCACCCATGTATTAGGTAATATTCTGTTTAATCCGTAAAAAATCTTGATAAGTATGTCAGTGTTAAGAAATGTGAGGAAGTTATCAATAAGGTGGTTAGGAGACACCGAGAGGCTGCTAATCACCTTGTAGGTTCTTGAAACCATTGAAATTTTCAATGATCATATTTCAACCAGAACCTTGTTTTTCTGCTCTCCGTGAACAATGCAATTAGGCAGATAAGAACTTCTTCAGTCAAATTCCGCTTGCAACTCTATGTGGATAATGGATTTAGCACCTGACTACTGAGTAACATATGCCTAGGGAAAACACTTCCATGAGATTGCTAGAGTTGCATATGTAATTTCCTTGGATAGGAATTTGTGAACAACTAATTCATCTCTACCAATTAGTTGGAGTTTTTTGTGTAGAGTTGCTAATAGGTATTTTGATCTGTTTCTTCTTCTTCTTCTTTCTATGTAGCGTTGAATGATGCTTTAAAGGAGGAGATACAGCATCTGAAAGTGCTAACTGGGCAAGGCATAGCAAATGGTGGACCTATGATGAACTTCCCAGCAACCTTTGGAGGCAATCAGCAGTTCTACTC</genome_strand>
        <mrna_strand>AGAAAGCCACGTCAGCTGCAAAGCTTGCTGAACTTGCTCTTATTGATCCTAAACGTGCCAAGCG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTTGGGCCAACAGGCAGTCAGCTGCAAGATCAAAGGAAAGGAAAATGAGATATATAGCAGAGCTTGAGAGAAAAGTTCAGACTCTGCAAACGGAAGCAACTACTTTATCTACTCAGTTGACCCTATTGCAG.............................................................................................................................................................................................................................................................AGAGATACAAACGGCCTGAATGCTGAAAACAGTGAACTTAAACTGCGTTTACAAACAATGGAACAACAGGTTCACTTGCAAGATG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTTGAATGATGCTTTAAAGGAGGAGATACAGCATCTGAAAGTGCTAACTGGGCAAGGCATAGCAAATGGTGGACCTATGATGAACTTCCCAGCAACCTTTGGAGGCAATCAGCAGTTCTACTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E293754" ref_strand="+" ref_description="SGN-E293754 [cLET-21-O11]">
      <seq>gagttagacatcagcatagccagtccatggatggttcaactacaatcaagccagagatgctcatgtcaggagtggaagagccttcttgaggtgaaactaagaaaggcacgtcagctgcaaagcttgctgaacttgctcttattgatcctaaacgtgccaagcggatttgggccaacaggcagtcagctgcaagatcaaaggaaaggaaaatgagatatatagcagagcttgagagaaaagttcagactctgcaaacggaagcaactactttatctactcagttgaccctattgcagagagatacaaacggcctgaatgctgaaaacagtgaacttaaactgcgtttacaaacaatggaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0167M06.1" temp_strand="-" temp_description="C06HBa0167M06.1  AC211057.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0167M06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="71085" stop="65949"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="70785" g_stop="70623" g_length="163"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="163" r_length="163" r_score="0.982"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="70622" i_stop="66699" i_length="3924">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="66698" g_stop="66566" g_length="133"/>
          <reference_exon_boundary r_type="cDNA" r_start="164" r_stop="296" r_length="133" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="66565" i_stop="66313" i_length="253">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="66312" g_stop="66249" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="297" r_stop="360" r_length="64" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0167M06.1" gen_strand="-" ref_id="SGN-E293754" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>360</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0167M06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E293754" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="70785" e_stop="70623"/>
          <exon e_start="66698" e_stop="66566"/>
          <exon e_start="66312" e_stop="66249"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGTTAGACATCAGCATAGCCAGTCCATGGATGGTTCAACTACAATCAAGCCAGAGATGCTCATGTCAGGAGTGGAAGAGCCTTCTTCAGCTGAAACTAAGAAAGCCACGTCAGCTGCAAAGCTTGCTGAACTTGCTCTTATTGATCCTAAACGTGCCAAGCGGTAAGGCTTTCTATGGAAATGTTGTTGCTCATTTACTATAGCAGTCTCTTTAACATTATTTTAGCTTGGCCTTGTCATTATATTTTGCTAAACTGGCACTGCTTAGGATGATACCGTTACGTGGAGGTCTGGTGGCAGACTAGAGTCTCCTAAACTATGAGCCCACTAAATGTGTGCTGGATGTTTAAAGCGGGCTTAGATATTATGCTTCATTGTTTTTTTATGAAAGCCTGCTCTGTTTTGGTGATAATCATTCATTCTGCTGGTGGTTAGGCATTTTATCTGTATTTTTCCTAGCTACTAGCTCCTTGAACTTTTGGATTTTGTTTAATGAAGCAGTTCTTGATGGAACTTCTAAAGGTCTGCCTGCGGCTTCGTCTGCTCCCTTTTCCTGTTCTAAGGCTGCCTCTGGCTGCTTCTGTCATCTTTTGCTGTTCAAAGGTTGAAAAGACTGAAATTATGAGAGTTACAGGAAGGAAAAATTAAAAAGAATAGACTGACCAGGCCCTTCTGTCTCTCTACTCTATCTGTCCAGCAAGTTGTTCCTGCTCCCCGAGCATTTCATTTCAATTTCTTGTCCTCTCCAGCTCTTCCTTGAGCCTACATCTGAACAAGCTCAGCTCCCCAAAAGTTGGTGTGTTCCAAACCACCTTTCAATAACAAATTCCTGCTTTCTTGGGTCCTCTAAATTAGTTAAAGTTAAACCTTTGTTGTTGGCTATGGGGGCCCACTGCCCCTCCCTTACTTTATAGACAATTTAAATTTATCTTCAAGAGGGAGGGGAAGGGTCAGGGAACATATGAGATTGAACACCCAAGGATATGACCTAGTGGCCAATGATGTGGGTGCAAACTCTGGAAACCCGTCCTAACAGAGACAAAAAGACGCTAGGTAATTTCTGGGCATTTGCTTAAGCCTTGCTGGCTGAGTACCCAGTAAGGTAGAAGGTAGCAAGTAGCCGGTGAAATAGTCGAGGTCCCACCATTCTTGTCTGTGCTCCACCTTAATGGAAAAAAAATAAGAGATCAAAAAAACTATGGCCCCTCCAAGGAGTGTGAAGCAGACAATTGTAGCTAATGAAGAAAGGTAAATCAATGGTGGCACATACAGAGAGACTGTGATTGTCCTTACAGGATTAGAGCCAAATACAATTCAAATGGCAGTAGAAATTTTTTTTATAAGGTTACTGGCTTGCACAAATTAGAGAAAAGTTATGGGATGGTTCGGTGTCTTAAGCTTATTTGTTGTCCTAGTCAAACTGTTCTTTTCCGGGTCCCATGCTTTTTTTGCTCAGCGACTTAGCAGTAGGCTAGTAGCTTCATTATGTTTTGTTTTGGTGGGAAAACTTAAATGTTGGTTCATTGCAGATGAAACTATAGTAGTACTTTAGTCTTGGTCTTTCTCCTGATATTAAATTAAGGCTCTTCTTATCTTTTGCTTTCTCGTGTCCTTTTACTTAGCAAAAATATTAAATAGACTTAAGGGAACTATATTACAATGTAGAGTGAGAAAATTGATTAATAGGAGCTGAATAGCAATAATGTTGTTTCTTTTGGACATCTAAGTTTAGTGACTATACTTGTAAATTAAAAACGGTTTTATAGAGTATTATCAAGAGTAAAATAAAGACTTTAGAATGCTAATATGCATGTTAACCAAGCCCGGTTTTATAGAGTTTAGTCAAGATGATTAAAATAAAGACTTTATAGGCGTCCACTATCAGTCAATGAACCAGGTCTCGACTCAGTAAGAACAGAATGTAAGCACAGACAGTAGTTAGCATCCACTATAGTTAACGGACCAGGTCTTGTGACTCAGCAAGAACAATAGCTGAAATAAGTGCAAAAAGTAAATAGCTGAAGGTAAAATTTGCACAAGCACTTTACGTGGAAACCTCCTTGCTCAAGGGAGTAAAACCACGACCTATCACACATGATTTTCAACTGTTTCACTAATCTTCTTTAAGCAAAAGTGAACCGCAGTTACAACCAATGTGAGAAAAAGTTATTAATCTCACGACCAAGTAATAACCTATTACTTGAAGAGTCTAAGCAGATGTTAGTCTGCCCACTAAGCTATCACCACTAGACAAATTAGGATTTGACTAAGCAACACGCAGGTTGCCTACTAAACCACCTAACTAAGCAGCACATACGGCTGCCTACTAAGCTATCACCACTAGACAACTTAGAATTTCAACTAAGCGAATGTCACACCGCCAACTAAATCACCTACCACTAGATAACTTAGAATTTGACTAAGCAACAACAATGTTGCCCTCTAAATCAGTTAGACTCAACTAATTTAGACCTTTTCACAAACCAAACTATCTGAATCCTTTATAGACTAGGAACAAGTTTACAATATATGGACGAAAATATAACTCCTAAGACACACTCTAATGCTTGCAACTTGATCAGGTCCTTGTTGTGTTTGCCGGAGAATACTTCACCAAAATGGTCTTTGCTTGTATACTTCAGAAGTTTCAAGATGCAAAAAAACTATAAATGAAAGAGACAAACTCAAACTCAACAAAGATGCTTCAACACTTTATAGATCTTTTTGATGAGTATGAGTATTGTTCTTTCTTGAAGATGGCTTTTTCCTTTTAACCTTGTGAGTTTTAATTTGCCAAAATCTTGTGTTTGTGTTTTGGAGAAGAGATTGTATCACCATGAACACAAACTCTTGGGACAAAGCTATTGGCCGAGAGTACGCTGTCATGAAAAGTTGTGCACCAACCACATCAGGGTTGACAACTTTTTGATAGTTGTCTTTTCGTCCTTTTCTCGTACGTAGAGTTTTCGGGACCAGGTCCCTTGCTGCGTTCTTTAATGCTTGAGTTCTTTGACAAAAGACTTGCTGACTTTTTCTCTTCTTGAATGAATGAACTTAATATGTTGTTTGTCATGTTGAATGTATCAACTCCATTTTGATTGGTTCAGTATGCTGGCGCCTCACCTACCACTGACAGGACAACTTTACAATTGTACACCATTATTGGTGCAGTACGCTGCACTTTTTACCTACCATCTGACATGGCATCTTTTTAGCTGTTCCCAGGATGAATTCGGACATTCTGCCAGGGGCCCGGTCCCTGCATTTGTGAGGATCATCAAAACATCTAGAATATTATATTTTCTCCCTTTTTGATGATTACACACAAATGTTCCTCACATTGAGTTTATTCATTAAGTTGCCCTGTCATCAGTCCCAATAACAAGGATCTGTGTCCCTTGTTAGATCAATAAGTTTATTAAATCATCAAAACTTAACATTAGCTCCAAAATAATATTTACCAACTCCATGAATGGTAAGGCAAAGTATAAGAACAATGAACATGTCTATTCACTATGACAAATAGAAAATTATTTTGAAATCCTCGACCAATCTATAAGAAAATACTTTTAATTTCTTCTGCTCAAACAGTAAATTATAGAAATTAGAAACTAGTACCATATGAGAATGGAGAAGTTTAAAAAGGTTATATAAATGAAGGATGTATATCCCAAGCTAGTGGTTCATTCGCTAAATCTATCAGAGAAAAAGATGGATGGTTTGTAAACAGTCCTTTTACCTTTTGGCTATGCTATTACTTGAAGTGGTGCTGAGGTTTGCTGTCTCCAGTCTGAAACCATTTCTCTATGTATCCATGAGGCCTTCTTTTTCCTGTCTTTTGCTCTCTTTTTAATCAGACAAATCATTAAGTTTGCTAAATACTGTTACTAGCAAAAAAAGGTTTCTTGTTGCTATCTAAGTCTTTGCACAGCTTTCTGAAAGTATTCATAGTGCATTGATGTAGGAGATCCACCTGTTTTAAGGTCTTTTGTGTTCCTTGAATTTGTTTGAATTTGTCTGATGTAGTTGTTTAAAAGTTAAGCCAATTAGTTAATCATCACTGTATTTGCTTATGCTGTGCAATAGGATTTGGGCCAACAGGCAGTCAGCTGCAAGATCAAAGGAAAGGAAAATGAGATATATAGCAGAGCTTGAGAGAAAAGTTCAGACTCTGCAAACGGAAGCAACTACTTTATCTACTCAGTTGACCCTATTGCAGGTGTATATCAGTTTCTCTCATTACTCAGTTATTTTTTGTGTTCTTTCCTCTTTTTATTTCTGTTGTTTTCTGTTATTGGAAACATGTCTAGTGTGGTTGAAGTGATGGAAGTAGATAAGTTCTTGGTCTAGAATCTGCAGCATTTGCTTGCACATGGAAAAATGTGCAGATATATGTATCTTCAGCCTTTTTCTCACGTATAACATAAGACTATTGGTTTTGATTTGCCTTTTTTTTTCTCCATATGAAACAGAGAGATACAAACGGCCTGAATGCTGAAAACAGTGAACTTAAACTGCGTTTACAAACAATGGAAC</genome_strand>
        <mrna_strand>GAGTTAGACATCAGCATAGCCAGTCCATGGATGGTTCAACTACAATCAAGCCAGAGATGCTCATGTCAGGAGTGGAAGAGCCTTCTTGAGGTGAAACTAAGAAAGGCACGTCAGCTGCAAAGCTTGCTGAACTTGCTCTTATTGATCCTAAACGTGCCAAGCG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTTGGGCCAACAGGCAGTCAGCTGCAAGATCAAAGGAAAGGAAAATGAGATATATAGCAGAGCTTGAGAGAAAAGTTCAGACTCTGCAAACGGAAGCAACTACTTTATCTACTCAGTTGACCCTATTGCAG.............................................................................................................................................................................................................................................................AGAGATACAAACGGCCTGAATGCTGAAAACAGTGAACTTAAACTGCGTTTACAAACAATGGAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E379230" ref_strand="+" ref_description="SGN-E379230 [TUS-1-A3]">
      <seq>tttgtatggataaggataagtcttcttcaagccatataggaggttcgttgcctccatcagggagatactcattattttcacctcccggtagtagctccaatgtaaagtcagaacaacctggattagcaaatttacctcccttaggacctggaaatgcttcagaatcaggtcattttggtcatggtttgtcggcagattcaagcctgtttagtcttgatataagccgaatgtctgataacccaccaagaaaatttggtcataggcgtgcccactcagaaattcttactcttcctgatgatattagctttgatagtgatcttggcgttgttggactagatggaccgtctctgtcagatgagactgaggaggacatcttgtcaatgtaccttgacatggataagttcaattcttcaactctgtcttctgaattccaagtgggtgagtcttcttcagctgctccaggttcatcacaaacaacagcaatggcttcaggaacaaataaatttgctcctactgttagtgagaagccaagagttagacatcagcatagccagtccatggatggttcaactacaatcaagccagagatgctcatgtcaggagtggaagagccttcttcagctgaaactaagaaagccacgtcagctgcaaagcttgctgaacttgctcttattg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0167M06.1" temp_strand="-" temp_description="C06HBa0167M06.1  AC211057.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0167M06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="71616" stop="70342"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="71316" g_stop="70642" g_length="675"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="675" r_length="675" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0167M06.1" gen_strand="-" ref_id="SGN-E379230" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>675</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0167M06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E379230" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="71316" e_stop="70642"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTGTATGGATAAGGATAAGTCTTCTTCAAGCCATATAGGAGGTTCGTTGCCTCCATCAGGGAGATACTCATTATTTTCACCTCCCGGTAGTAGCTCCAATGTAAAGTCAGAACAACCTGGATTAGCAAATTTACCTCCCTTAGGACCTGGAAATGCTTCAGAATCAGGTCATTTTGGTCATGGTTTGTCGGCAGATTCAAGCCTGTTTAGTCTTGATATAAGCCGAATGTCTGATAACCCACCAAGAAAATTTGGTCATAGGCGTGCCCACTCAGAAATTCTTACTCTTCCTGATGATATTAGCTTTGATAGTGATCTTGGCGTTGTTGGACTAGATGGACCGTCTCTGTCAGATGAGACTGAGGAGGACATCTTGTCAATGTACCTTGACATGGATAAGTTCAATTCTTCAACTCTGTCTTCTGAATTCCAAGTGGGTGAGTCTTCTTCAGCTGCTCCAGGTTCATCACAAACAACAGCAATGGCTTCAGGAACAAATAAATTTGCTCCTACTGTTAGTGAGAAGCCAAGAGTTAGACATCAGCATAGCCAGTCCATGGATGGTTCAACTACAATCAAGCCAGAGATGCTCATGTCAGGAGTGGAAGAGCCTTCTTCAGCTGAAACTAAGAAAGCCACGTCAGCTGCAAAGCTTGCTGAACTTGCTCTTATTG</genome_strand>
        <mrna_strand>TTTGTATGGATAAGGATAAGTCTTCTTCAAGCCATATAGGAGGTTCGTTGCCTCCATCAGGGAGATACTCATTATTTTCACCTCCCGGTAGTAGCTCCAATGTAAAGTCAGAACAACCTGGATTAGCAAATTTACCTCCCTTAGGACCTGGAAATGCTTCAGAATCAGGTCATTTTGGTCATGGTTTGTCGGCAGATTCAAGCCTGTTTAGTCTTGATATAAGCCGAATGTCTGATAACCCACCAAGAAAATTTGGTCATAGGCGTGCCCACTCAGAAATTCTTACTCTTCCTGATGATATTAGCTTTGATAGTGATCTTGGCGTTGTTGGACTAGATGGACCGTCTCTGTCAGATGAGACTGAGGAGGACATCTTGTCAATGTACCTTGACATGGATAAGTTCAATTCTTCAACTCTGTCTTCTGAATTCCAAGTGGGTGAGTCTTCTTCAGCTGCTCCAGGTTCATCACAAACAACAGCAATGGCTTCAGGAACAAATAAATTTGCTCCTACTGTTAGTGAGAAGCCAAGAGTTAGACATCAGCATAGCCAGTCCATGGATGGTTCAACTACAATCAAGCCAGAGATGCTCATGTCAGGAGTGGAAGAGCCTTCTTCAGCTGAAACTAAGAAAGCCACGTCAGCTGCAAAGCTTGCTGAACTTGCTCTTATTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E200371" ref_strand="+" ref_description="SGN-E200371 [cLEC-1-A23]">
      <seq>tttgtatggataaggataagtcttcttcaagccatataggaggttcgttgcctccatcagggagatactcattattttcacctcccggtagtagctccaatgtaaagtcagaacaacctggattagcaaatttacctcccttaggacctggaaatgcttcagaatcaggtcattttggtcatggtttgtcggcagattcaagcctgtttagtcttgatataagccgaatgtctgataacccaccaagaaaatttggtcataggcgtgcccactcagaaattcttactcttcctgatgatattagctttgatagtgatcttggcgttgttggactagatggaccgtctctgtcagatgagactgaggaggacatcttgtcaatgtaccttgacatggataagttcaattcttcaactctgacttctgaattccaagcgggtgagtcttcttcag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0167M06.1" temp_strand="-" temp_description="C06HBa0167M06.1  AC211057.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0167M06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="71616" stop="70564"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="71316" g_stop="70864" g_length="453"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="453" r_length="453" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0167M06.1" gen_strand="-" ref_id="SGN-E200371" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>453</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0167M06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E200371" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="71316" e_stop="70864"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTGTATGGATAAGGATAAGTCTTCTTCAAGCCATATAGGAGGTTCGTTGCCTCCATCAGGGAGATACTCATTATTTTCACCTCCCGGTAGTAGCTCCAATGTAAAGTCAGAACAACCTGGATTAGCAAATTTACCTCCCTTAGGACCTGGAAATGCTTCAGAATCAGGTCATTTTGGTCATGGTTTGTCGGCAGATTCAAGCCTGTTTAGTCTTGATATAAGCCGAATGTCTGATAACCCACCAAGAAAATTTGGTCATAGGCGTGCCCACTCAGAAATTCTTACTCTTCCTGATGATATTAGCTTTGATAGTGATCTTGGCGTTGTTGGACTAGATGGACCGTCTCTGTCAGATGAGACTGAGGAGGACATCTTGTCAATGTACCTTGACATGGATAAGTTCAATTCTTCAACTCTGTCTTCTGAATTCCAAGTGGGTGAGTCTTCTTCAG</genome_strand>
        <mrna_strand>TTTGTATGGATAAGGATAAGTCTTCTTCAAGCCATATAGGAGGTTCGTTGCCTCCATCAGGGAGATACTCATTATTTTCACCTCCCGGTAGTAGCTCCAATGTAAAGTCAGAACAACCTGGATTAGCAAATTTACCTCCCTTAGGACCTGGAAATGCTTCAGAATCAGGTCATTTTGGTCATGGTTTGTCGGCAGATTCAAGCCTGTTTAGTCTTGATATAAGCCGAATGTCTGATAACCCACCAAGAAAATTTGGTCATAGGCGTGCCCACTCAGAAATTCTTACTCTTCCTGATGATATTAGCTTTGATAGTGATCTTGGCGTTGTTGGACTAGATGGACCGTCTCTGTCAGATGAGACTGAGGAGGACATCTTGTCAATGTACCTTGACATGGATAAGTTCAATTCTTCAACTCTGACTTCTGAATTCCAAGCGGGTGAGTCTTCTTCAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E709570" ref_strand="+" ref_description="SGN-E709570 [FA52BH03]">
      <seq>cgtctctctcgcatgtgataaagctgcttccttctgcttctgcttcccttttcacatttttcccttctctgcagatctaatttcaaagctaatcgaaaccgtagggaattgatctgggataagcttgtttggtgtttgcggaatctacagggtctcagcaaggggtttcatgttctggtatagctaacttttgttaaagtaattcggtttcggtggaatttgaataccccatgattttaaatgcagaggaaaagcaacttggattgtgattttatggttttcctgctataatgttcttgctttgaccggggaaaagtatcattacttgttgatttttggttttctgttggtacggttcttgttggagtatatatatatgtgtgggatgttgggtttgttcctgtgctgttaacatttggaatttgaagggttggggttttttctgtttggatttggagggtttgtatggataaggataagtcttcttcaagccatataggaggttcgttgcctccatcagggagatactcattattttcacctcccggtagtagctccaatgtaaagtcagaacaacctggattagcaaatttacctcccttaggacctggaaatgcttcagaatcaggtcattttggtcatggtttgtcggcagattcaagcctgtttagtcttgatataagccgaatgtctgataaccccaccaagaaaatttggtcataggcgtgcccactcagaaattccttactcttcctgatgatattagctttgatagtgatcttggcgttgttggactagatggaccgtctctgtcaaatgaaactgagg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0167M06.1" temp_strand="-" temp_description="C06HBa0167M06.1  AC211057.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0167M06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="72348" stop="70651"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="72050" g_stop="71949" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="102" r_length="102" r_score="0.980"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="71948" i_stop="71675" i_length="274">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="71674" g_stop="70951" g_length="724"/>
          <reference_exon_boundary r_type="cDNA" r_start="103" r_stop="828" r_length="726" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0167M06.1" gen_strand="-" ref_id="SGN-E709570" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>826</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0167M06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E709570" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="72050" e_stop="71949"/>
          <exon e_start="71674" e_stop="70951"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCTCTCTCGCATGTGATAAAGCTGCTTCCTTCTGCTTCTGCTTCCCTTTTCACATTTTTCCCTTCTCTGCAGATCTAATTTCAAAGCTAATCGAAACCGTGTAAGAATTTGCCCCTTTTCTATTCCATTATTTTAATGCATTGTTTTTCATTTTCTTTATCACCCATCTCCTTGATTTGTTGCCCTGTACTTCTGTTTTTGTCTGTGTGTGTTAAATTGAGAAATGGGTTTTGAATTTCTTTGATTTTTGAATGCTGGGTTTGTATTTTTTTTCTTGAATCTTTGTTGTATAGAGTTTCTGTTTATCAGAATTCCATCTTTGTATCATTAAGTTTTGTGGGTTTTGTTCATTTTTTTGTTTTTTTTATTTTCAGAGGGAATTGATCTGGGATAAGCTTGTTTGGTGTTTGCGGAATCTACAGGGTCTCAGCAAGGGGTTTCATGTTCTGGTATAGCTAACTTTTGTTAAAGTAATTCGGTTTCGGTGGAATTTGAATACCCCATGATTTTAAATGCAGAGGAAAAGCAACTTGGATTGTGATTTTATGGTTTTCCTGCTATAATGTTCTTGCTTTGACCGGGGAAAAGTATCATTACTTGTTGATTTTTGGTTTTCTGTTGGTACGGTTCTTGTTGGAGTATATATATATGTGTGGGATGTTGGGTTTGTTCCTGTGCTGTTAACATTTGGAATTTGAAGGGTTGGGGTTTTTTCTGTTTGGATTTGGAGGGTTTGTATGGATAAGGATAAGTCTTCTTCAAGCCATATAGGAGGTTCGTTGCCTCCATCAGGGAGATACTCATTATTTTCACCTCCCGGTAGTAGCTCCAATGTAAAGTCAGAACAACCTGGATTAGCAAATTTACCTCCCTTAGGACCTGGAAATGCTTCAGAATCAGGTCATTTTGGTCATGGTTTGTCGGCAGATTCAAGCCTGTTTAGTCTTGATATAAGCCGAATGTCTGATAA-CCCACCAAGAAAATTTGGTCATAGGCGTGCCCACTCAGAAATT-CTTACTCTTCCTGATGATATTAGCTTTGATAGTGATCTTGGCGTTGTTGGACTAGATGGACCGTCTCTGTCAGATGAGACTGAGG</genome_strand>
        <mrna_strand>CGTCTCTCTCGCATGTGATAAAGCTGCTTCCTTCTGCTTCTGCTTCCCTTTTCACATTTTTCCCTTCTCTGCAGATCTAATTTCAAAGCTAATCGAAACCGT..................................................................................................................................................................................................................................................................................AGGGAATTGATCTGGGATAAGCTTGTTTGGTGTTTGCGGAATCTACAGGGTCTCAGCAAGGGGTTTCATGTTCTGGTATAGCTAACTTTTGTTAAAGTAATTCGGTTTCGGTGGAATTTGAATACCCCATGATTTTAAATGCAGAGGAAAAGCAACTTGGATTGTGATTTTATGGTTTTCCTGCTATAATGTTCTTGCTTTGACCGGGGAAAAGTATCATTACTTGTTGATTTTTGGTTTTCTGTTGGTACGGTTCTTGTTGGAGTATATATATATGTGTGGGATGTTGGGTTTGTTCCTGTGCTGTTAACATTTGGAATTTGAAGGGTTGGGGTTTTTTCTGTTTGGATTTGGAGGGTTTGTATGGATAAGGATAAGTCTTCTTCAAGCCATATAGGAGGTTCGTTGCCTCCATCAGGGAGATACTCATTATTTTCACCTCCCGGTAGTAGCTCCAATGTAAAGTCAGAACAACCTGGATTAGCAAATTTACCTCCCTTAGGACCTGGAAATGCTTCAGAATCAGGTCATTTTGGTCATGGTTTGTCGGCAGATTCAAGCCTGTTTAGTCTTGATATAAGCCGAATGTCTGATAACCCCACCAAGAAAATTTGGTCATAGGCGTGCCCACTCAGAAATTCCTTACTCTTCCTGATGATATTAGCTTTGATAGTGATCTTGGCGTTGTTGGACTAGATGGACCGTCTCTGTCAAATGAAACTGAGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E547369" ref_strand="+" ref_description="SGN-E547369 [TUS-71-D11]">
      <seq>gctgcttccttctgcttctgcttcccttttcacattttcccttctctgcagatctaatttcaaagctaatcgaaaccgaaaccgtagggaattgatctgggataagcttggttggtgtttgcggaatctacagggtctcagcaaggggtttcatgttctgttatagctaagttttgttaaagtaattcggtttcggtggaatttgaataccccatgattttaaatgcagaggaaaagcaacttggattgtgattttatggttttcctgctataaagttcttgctttgaccggggaaaagtatcattacttgttgatttttggttttctgttggtacggttcttgttggagtatatatgtgtgtgggatgttgggtttgttcctgtgctgttaacatttggaaatcattaatttgaagggttggggttttttctgtttggatttggagggtttgtatggataaggataagtcttcttcaagccatgtaagaggttcgttgcctccatcagggagatactcattattttcacctcccggtagtagttccaatgtaaagtcagaacaacctggattagcaaatttacctcccttaggacctggaaatggcttcgaatcaggtcattttggtcatggtttgtc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0167M06.1" temp_strand="-" temp_description="C06HBa0167M06.1  AC211057.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0167M06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="72328" stop="70827"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="72028" g_stop="71949" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="79" r_length="79" r_score="0.975"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="71948" i_stop="71734" i_length="215">
            <donor d_prob="0.998" d_score="0.96"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="71733" g_stop="71728" g_length="6"/>
          <reference_exon_boundary r_type="cDNA" r_start="80" r_stop="85" r_length="6" r_score="0.500"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="71727" i_stop="71675" i_length="53">
            <donor d_prob="0.900" d_score="0.00"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="71674" g_stop="71127" g_length="548"/>
          <reference_exon_boundary r_type="cDNA" r_start="86" r_stop="639" r_length="554" r_score="0.945"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0167M06.1" gen_strand="-" ref_id="SGN-E547369" ref_strand="+">
        <total_alignment_score>0.949</total_alignment_score>
        <cumulative_length_of_scored_exons>634</cumulative_length_of_scored_exons>
        <coverage percentage="0.992" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0167M06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E547369" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="72028" e_stop="71949"/>
          <exon e_start="71733" e_stop="71728"/>
          <exon e_start="71674" e_stop="71127"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTGCTTCCTTCTGCTTCTGCTTCCCTTTTCACATTTTTCCCTTCTCTGCAGATCTAATTTCAAAGCTAATCGAAACCGTGTAAGAATTTGCCCCTTTTCTATTCCATTATTTTAATGCATTGTTTTTCATTTTCTTTATCACCCATCTCCTTGATTTGTTGCCCTGTACTTCTGTTTTTGTCTGTGTGTGTTAAATTGAGAAATGGGTTTTGAATTTCTTTGATTTTTGAATGCTGGGTTTGTATTTTTTTTCTTGAATCTTTGTTGTATAGAGTTTCTGTTTATCAGAATTCCATCTTTGTATCATTAAGTTTTGTGGGTTTTGTTCATTTTTTTGTTTTTTTTATTTTCAGAGGGAATTGATCTGGGATAAGCTTGTTTGGTGTTTGCGGAATCTACAGGGTCTCAGCAAGGGGTTTCATGTTCTGGTATAGCTAACTTTTGTTAAAGTAATTCGGTTTCGGTGGAATTTGAATACCCCATGATTTTAAATGCAGAGGAAAAGCAACTTGGATTGTGATTTTATGGTTTTCCTGCTATAATGTTCTTGCTTTGACCGGGGAAAAGTATCATTACTTGTTGATTTTTGGTTTTCTGTTGGTACGGTTCTTGTTGGAGTATATATATATGTGTGGGATGTTGGGTTTGTTCCTGTGCTGTTAACATTTGG--------AATTTGAAGGGTTGGGGTTTTTTCTGTTTGGATTTGGAGGGTTTGTATGGATAAGGATAAGTCTTCTTCAAGCCATATAGGAGGTTCGTTGCCTCCATCAGGGAGATACTCATTATTTTCACCTCCCGGTAGTAGCTCCAATGTAAAGTCAGAACAACCTGGATTAGCAAATTTACCTCCCTTAGGACCTGGAAATGCTTCAGAATCAGGTCATTTTGGTCATGGTTTGTC</genome_strand>
        <mrna_strand>GCTGCTTCCTTCTGCTTCTGCTTCCCTTTTCACA-TTTTCCCTTCTCTGCAGATCTAATTTCAAAGCTAATCGAAACCGA.......................................................................................................................................................................................................................AACCGT.....................................................AGGGAATTGATCTGGGATAAGCTTGGTTGGTGTTTGCGGAATCTACAGGGTCTCAGCAAGGGGTTTCATGTTCTGTTATAGCTAAGTTTTGTTAAAGTAATTCGGTTTCGGTGGAATTTGAATACCCCATGATTTTAAATGCAGAGGAAAAGCAACTTGGATTGTGATTTTATGGTTTTCCTGCTATAAAGTTCTTGCTTTGACCGGGGAAAAGTATCATTACTTGTTGATTTTTGGTTTTCTGTTGGTACGGTTCTTGTTGGAG--TATATATGTGTGTGGGATGTTGGGTTTGTTCCTGTGCTGTTAACATTTGGAAATCATTAATTTGAAGGGTTGGGGTTTTTTCTGTTTGGATTTGGAGGGTTTGTATGGATAAGGATAAGTCTTCTTCAAGCCATGTAAGAGGTTCGTTGCCTCCATCAGGGAGATACTCATTATTTTCACCTCCCGGTAGTAGTTCCAATGTAAAGTCAGAACAACCTGGATTAGCAAATTTACCTCCCTTAGGACCTGGAAATGGCTTCGAATCAGGTCATTTTGGTCATGGTTTGTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E362135" ref_strand="+" ref_description="SGN-E362135 [cLPP-11-O4]">
      <seq>ctgcttccttctgcttctgcttcccttttcacattttcccttctctgcagatctaatttcaaagctaatcgaaaccgaaaccgtagggaattgatctgggataagcttggttggtgtttgcggaatctacagggtctcagcaaggggtttcatgttctgttatagctaagttttgttaaagtaattctgtttcggtggaatttgaataccccatgattttaaatgcagaggaaaagcaacttggattgtgattttatggttttcctgctataaagttcttgctttgaccggggaaaagtatcattacttgttgatttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0167M06.1" temp_strand="-" temp_description="C06HBa0167M06.1  AC211057.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0167M06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="72327" stop="71141"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="72027" g_stop="71949" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="78" r_length="78" r_score="0.975"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="71948" i_stop="71734" i_length="215">
            <donor d_prob="0.998" d_score="0.96"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="71733" g_stop="71728" g_length="6"/>
          <reference_exon_boundary r_type="cDNA" r_start="79" r_stop="84" r_length="6" r_score="0.500"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="71727" i_stop="71675" i_length="53">
            <donor d_prob="0.900" d_score="0.00"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="71674" g_stop="71441" g_length="234"/>
          <reference_exon_boundary r_type="cDNA" r_start="85" r_stop="318" r_length="234" r_score="0.979"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0167M06.1" gen_strand="-" ref_id="SGN-E362135" ref_strand="+">
        <total_alignment_score>0.978</total_alignment_score>
        <cumulative_length_of_scored_exons>319</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0167M06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E362135" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="72027" e_stop="71949"/>
          <exon e_start="71733" e_stop="71728"/>
          <exon e_start="71674" e_stop="71441"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGCTTCCTTCTGCTTCTGCTTCCCTTTTCACATTTTTCCCTTCTCTGCAGATCTAATTTCAAAGCTAATCGAAACCGTGTAAGAATTTGCCCCTTTTCTATTCCATTATTTTAATGCATTGTTTTTCATTTTCTTTATCACCCATCTCCTTGATTTGTTGCCCTGTACTTCTGTTTTTGTCTGTGTGTGTTAAATTGAGAAATGGGTTTTGAATTTCTTTGATTTTTGAATGCTGGGTTTGTATTTTTTTTCTTGAATCTTTGTTGTATAGAGTTTCTGTTTATCAGAATTCCATCTTTGTATCATTAAGTTTTGTGGGTTTTGTTCATTTTTTTGTTTTTTTTATTTTCAGAGGGAATTGATCTGGGATAAGCTTGTTTGGTGTTTGCGGAATCTACAGGGTCTCAGCAAGGGGTTTCATGTTCTGGTATAGCTAACTTTTGTTAAAGTAATTCGGTTTCGGTGGAATTTGAATACCCCATGATTTTAAATGCAGAGGAAAAGCAACTTGGATTGTGATTTTATGGTTTTCCTGCTATAATGTTCTTGCTTTGACCGGGGAAAAGTATCATTACTTGTTGATTTT</genome_strand>
        <mrna_strand>CTGCTTCCTTCTGCTTCTGCTTCCCTTTTCACAT-TTTCCCTTCTCTGCAGATCTAATTTCAAAGCTAATCGAAACCGA.......................................................................................................................................................................................................................AACCGT.....................................................AGGGAATTGATCTGGGATAAGCTTGGTTGGTGTTTGCGGAATCTACAGGGTCTCAGCAAGGGGTTTCATGTTCTGTTATAGCTAAGTTTTGTTAAAGTAATTCTGTTTCGGTGGAATTTGAATACCCCATGATTTTAAATGCAGAGGAAAAGCAACTTGGATTGTGATTTTATGGTTTTCCTGCTATAAAGTTCTTGCTTTGACCGGGGAAAAGTATCATTACTTGTTGATTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E747375" ref_strand="+" ref_description="SGN-E747375 [GI|47104587]">
      <seq>tttctttgacccatcgcttctcttcatcgctgtgttgaagttttggtttttgagttttgagatttgctgttcgaagatggtgcgattacagccagacccattcctcaatgaactgacgagtatgtttgagcgaactactgagcatggttccgtttgggttacgcttaaacactcttctgataaatctaaagcccaacggaataagatgaagacagctggtgaaactcttgaatttaagtgcctcatccgagcaactgatgggaaaaagaatatttccacaatggttggagcaaaagatcaccagcgtttccaagcatcttatgcaattttgctgaaggcccggttgactgcactaaagaagagggagaggaaggacaagaggaaggctactgattctgacaaaaagatggatatttcgaaaaagaaatctgctgctgctaaagcctctacatgaaactttagtcctttggtttattcccccattttgtttctaggatagagttgtaggatttgaaccccatccatttggggcgacaagtctgaaacttcattacaactccactgcatagaatgaagaaaggaggtgtttttactcaatttgattattcacatctaaattagtcaaactttttaaagagcttgttgggttatggaacagttgaaggaattttgtcataatcttgatcttttaattccttgaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0167M06.1" temp_strand="+" temp_description="C06HBa0167M06.1  AC211057.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0167M06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="73681" stop="83211"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="73981" g_stop="74059" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="79" r_length="79" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="74060" i_stop="74824" i_length="765">
            <donor d_prob="0.726" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="74825" g_stop="74918" g_length="94"/>
          <reference_exon_boundary r_type="cDNA" r_start="80" r_stop="173" r_length="94" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="74919" i_stop="75010" i_length="92">
            <donor d_prob="0.958" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="75011" g_stop="75120" g_length="110"/>
          <reference_exon_boundary r_type="cDNA" r_start="174" r_stop="283" r_length="110" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="75121" i_stop="82488" i_length="7368">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="82489" g_stop="82919" g_length="431"/>
          <reference_exon_boundary r_type="cDNA" r_start="284" r_stop="714" r_length="431" r_score="0.977"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0167M06.1" gen_strand="+" ref_id="SGN-E747375" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>714</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0167M06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E747375" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="73981" e_stop="74059"/>
          <exon e_start="74825" e_stop="74918"/>
          <exon e_start="75011" e_stop="75120"/>
          <exon e_start="82489" e_stop="82919"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCTTTGACCCATCGCTTCTCTTCATCGCTGTGTTGAAGTTTTGGTTTTTGAGTTTTGAGATTTGCTGTTCGAAGATGGTAAGCGCTAACTTCAACTCATCAAAATCAATTGATCGCAATACTCTTTCGAATCAAATCTGGAAATCAAACAATGTAGAATTTTTTGATGTTAATTTTTCTTTGTTTACGCCGTTTTCAGCTTTATTTGATCTATATTTCCTTTTTGAGATTATGGGTTTCTGTAGAGTATAAATTCATGTTAGATTCTTTGTGTTCTTGAGTTGTTATGTATGTATCCCGAATCTCACTATATTGAATTGTGGAAATTAGTTAATACCAGTTTAAAATGGTGCTTATCGATTGAATTAACTAATTGGGGGTTGAGGTGATGGAAAACTTTCCCACTTAGCATTATACTCGAGTGCTGATGAATTTGATGTGTAGGTTAGAAAATTTGTTGAATCTGATGTTTTTACTTCATCCTTTAACTGGATAAAGGAGGAGGATTACATGGGTTGGGTTGATAGCCAGCGTAGAAATAAGCGAAATTACAGGAATCTTCTAAGTCTACACACTGGTTTCATCCTTGCTTTCTCTCCTGAGCACACACTCAAGCTACCCAACTACTGTATTTCTTCCTCCTTTATTCAGGTGGCACTGGTGAAGCATGCTCACATTGTTTATGTTAAGTAATCACATTGTGGAGTTCAATGTGCTTCCTATTTGTGGATACAAAATTATATGGCATTTTGCTTATTTTTGGGAAGTTTGAAAGAAGTGGCTTTGTCCATCTTTTTGGTAGAACATAAGTTGACAATTACTGATCTGAATTGGATTTGTCAGGTGCGATTACAGCCAGACCCATTCCTCAATGAACTGACGAGTATGTTTGAGCGAACTACTGAGCATGGTTCCGTTTGGGTTACGCTTAAACACTGTGAGTTTGCCTCTTCGTTGGTTTTCCTGTGTTTTGTGCTTTGTATTCTCTTTATGAGTAATACTGATTGAGCAATCTTGTCCTTTGTATAGCTTCTGATAAATCTAAAGCCCAACGGAATAAGATGAAGACAGCTGGTGAAACTCTTGAATTTAAGTGCCTCATCCGAGCAACTGATGGGAAAAAGAATATTTCCACAATGGTAATTATCACAATAGAAAGTCTCTTACCTTTTTCCATCACCTTCTTTTTGCAAGTCTTGTCGTTTTCCCCATTTTTTTGCTTTGTTGGGCACTATGTTCTCTGGAACATTGAGGGTGTTAGTTTGTTGTATGAATTATTTTTTAGCATAAGTTTAAATGTGCAAATATAGATAATTCTAGGTCCTGGCCTGTATGTTTGAGATTGAGAGCATCAAATTCAAAAAAAGGATGGTAGCCTTGTGGTGCATAGAGAATGGGAGTCGTGGTCCTTGTTTACTTGATTGATAACTAATAGGTATCGTACATGCTTGTAATACAATATTAGAGCACATAAAGGGACAATTTCTCATAAAAGGCAAACAAATTATGGATGCAACTCTTTTAGTCAGTGAACCTGTGGATTCTAGACTCGAAGGTGAAGATCCAGGGATCATGTGAAACCTAGCTATAGAGAACCCATTATGATCATGTCAACTGGGAGTTACTTCTCAACCTTCTTTAAAAAATGGGTTTTGGTGGAAGATGGTTAAAGTGGATGGTTTTTGTATCAATACTGTCCTGAATTCTAGTCATAGGAGAAATTGCTGGAATTTTCCCTCAGAGAAAGAGGACTCGGGGAGACCCCCCTCTCTTTGCCTTTTCATATTAGCTATGGAAGGTTTCAGTAGTATGATGAGAGGTACTATTCAGAACAGTGGATAAAAGGTTTCAGGATAGGCAATCAAGCAGGGGAAGAGATGTAGATTTCCTTTCATTATTGCTGATGATATAGTTGTTTTCTAAGATGCTAAAGCAGATCAGATCATGTACATCAGAATGATTTTGGTGATCTTTGGGCAATTTTTGGTCCATTTGTAAAATTGGAGGAAAGGTAGTAGTTTCCCTGTCAAAGAAGTTCCACAAATTCAATGCCTGTCCATGTTATAAGTTTCGATGATTTAACAAACTATGACATCTAGTTGGGGACCTGATCCCATGAGGGACTGAGAGTTTCAGGCAATGTGCAAAGGACAGTTGTAAAGCTGCAACTGCTGCCACAATTGCAGTGGTTGGTGCACCTTTTCAGAGGAATAGTACTCAGCCAATGGCGTTGCACTAGGTAGTTTGTCCATCTTATAATAGTCATCTTGTCAAGGGACGTTTCCTAATTTTTGAGTTGAAGATTTCCATACGGCAAAATCCACTCTCAAAAAGAAATATTCTCATATGCATCAAGAGATCTGATCGAGTGATCTACTGTTCCCTTTAGTTGTTATTTTAGTTTATCGTCTCGTGTTTATACAGTGTAAGATCTGTTCATATGTTATAAAGGAATCAGATCATTTCAGTTGTAATCGTTGTTAAAAGTTTGAGTTGTAGCTAGAGTTAGCTATGTCGTGTTCTTGAAGTCTACATTAACTTAGCTTGTTGGCGTAGTAGGCAATAGAGGTATTACTTTGTTTATGAGTAACAAAGCTGTTACGAAAGGAGAAGGGATTAAGAGTTCATTTCCTAGGTTGCAAGAGTTTGTAATCGGGATCTTAACTCTTTGAAGTAATGGAATTGGCGAAATCCTGTGAGACAGGTTGTGATTTTCTCCTTCCTTAAGCAAGGGGGTTAACACGTAAACATTTTGTGTTCTTTATTTTAAGTTTTTCTTTCTGCACTGTTCTTACTATGTGAACGGACTTGGTCCATTGACTTGTGGTGGACGCATGTAAGTCATCAGTCCAACATCTTGAGTTGTAAAATTGAGAATTTCCCGACCAACTTACTTGGGGATGCCCCTTGGAAACAATCATAAGGAGCTAGAAGTTTGGGATGAGATTATTGAAAAAATTAGTAACCAAACTCAAAATGTGTTGAGCGCTCGACTTGCTTTATGTGCGCTTCGGTGTCGTCACCAGTGTTCTAAGACATATTTTTCCTTGCCAATGTGTCTCTGCCGAAGAGGTGACACTAAACAATTGATATTTCACTTAATCACATTTTTTTTGAAAAGGTACTTTATCATTATTTTTTTCGATTTCTTCAGTCATATATTTGTTATTTGTGTTTATAATTATTCGTCTTGGACTCAGCATATATATTTGTAATTTTTTCTCCCTTTGTGCCTTTTTTCATTAAAGCCCATTCTTTGTTTGCACATAAAGGTCCAATGGGCCTTAGAGTTTTTTTGCGCTTTTCGCGTTTGATAACACTTGAAAAACTAGCCAATTGGAAAGCCCGATGTTTATCTCTTGGAGGAAGTAGTACTCTTATGAACTCAGTATTGGACTCATTGCCAACACATGTCATGTCCTTATTTCTAATGCCTTCAGGTGGAGGATACCATACAAGTTGAGGACTTTCTATGTTAGGTAATAAGGAGGGCAGAGGTATTCACTAAGTGAAATGCCAAACTGCTCAGCTTATGGTTGACTTGGTATTAGGAATCTGGGGCTTCAAAACAGATGCTTATTGACAAAATGGAGGTTTGTTGGTGAGGATCATGCACTCTGGAAGGAAGTAACTATAAAAATATGGGCAGAGTAACTATTTGTGTTCTAATATGGTCTATGTTGGCTGGGAATATAGACTGTAGTGTGTGGAATGACACCTAGATCCTTTTTCCGAGAGATAAATGGATTGGACTCGAGCCTTTAATGAGCTCATTTTCGGAACTGTTCTCATTTTGTAGCAACTCTGAAGCATCAATAGTTGACACTCTGGGTGTGTTTGTGTCACGACCCAAACCGGGTTGCGACTGGCACCCACACTTACCCTCCTATGTGAGCGAACCAACCAATCTAAACCTTAACATTTCAATGTAATAACAGTAGAAAATAATGCGGAAGACTTAACTCATTAATAAAATCAATTCAATAACTATCAATATTCAACATCTATTATTCCCAAAACCTGGAAGTCATCATCACAAGAACATCTACGATCAAATGACTAAACTAAGAGTATTCTAAAAGCTAAAAATACATAAGAAGCTAGTCCATGCCGGAAGTTCAAGGCATCAAGACTTGAAGAAGAAGATCCAGTCCAAGCTAGAAGCATTAGCTCACCCTGAATTTCCGATGTAGTAAGACTGGCTTGAATTACTGTTGAGTTGAAGACGATGGCACGTTTGCTGCACTCCACAAATAAACAAGAAGAAAACATAAAAGTAGGGGTCAGTACAAAACACGGGTACTGAGTAGATATCATCGGCCAACTCAAAATAGGGAACAGTATATATCAATATTATCGTAAATCAACTATAAAACTCAACATGTAGCCACAACAAGTATTATAATCATCAATAAGTACCATCAAGTTCATCCATGAGGGCTCAAGCCTCAACACCATACTCATTTGGGAATTATGTTCGTTAGATTGAGTATATTAACATCTTTCAAGATTCATTATCTTTAATTCTCTTGTGTCGGTACGTGACACTCCGATCCCTCATATTCATTATTCCTCTTGTGTCGGTACGTGACACTCTGATCCCCTATATCTACGTGTCGGTTCGTGACACCCGATCCCCTACATCATTCTGTAAATCATCAGGCCTTCTCTATACCAAGGTATCATCAATCCTATTACTTTAATTCATCAAGCCTTCTTCTATACCAAGGCATCATCATTAATAATGTATATTAAAGTTTCCTTTCAAGATTTGGGATTCAATATTTTCATCATGCTTATCTTATCACAATCACATAATCATATTCACGCAAACATACAATTAAGCTTATAGTAGGGTTTACAATACTACCAATACATATCATTCTCTATTAAGAGTTTACTATGAAAGCATGAAAACCATAACCTACCTCCACCGAAGAGTTGAATCAAGCAAGAATTTTCCCAAAGCTTTGTTTCTCCCTTCTCGTTCGATTTTCTCTCTCTCTCTTGTTCTTTCTATTTTCTTTATTCAAACCCTCTTTCTTTTACCCTAATTAGTATATAATTAAGAATAAAAGATGGCAATAATACCCCACTAATTAACTTAGGGTTACCTCTTTTAACCCCTCAAGAATTTGAGTTATTAATATAACCCCACGAACTTTATAATTAAGGCAAGAATAGTCAAAAACGTCCCTTAAAACTTAACCAGAAATCCGACTCTGCCTGGGATTTGCGCAACCTGTGACGGGCCGTCGTGCCTGCGACGGTCCGTCCTGCAGGTCGTCGCAGAGTTCAGAGACCCAAATTTCCACCAAGGGTCTGTGACGGTCCGTCACACCTGTGACGGTCCGTCCTGCCATTCCGTCACAAAGTTCAGAGAGTCGATTTTTAGTACCCAATTTCAGATTTTCTAAGTGTTTTGAAACGAGACCCTGCGACGGTCCCTCGTGCCCTTGACGGTCCGTCGTGGGGTCCGTCGCTTCTGCCAGTTTTTCCAGAATTGAAGTCTGTTGCTCAAAACGACTAAACGGGTCGTTACAGTTTGGTATGGAGGAAAATGTTTTCCATGGAAAATGTTTTCCTAGAAAATGTTTTCCTGGAAAACAAGTAAATTTTGGACTTATTTTCTCATGTTTGGTTGGTGAGTAGAAAATATTTTCTGGATATGATTTTTAGTGTTTGATTTATGAATGAAAAATGTTTTTGAGAGACATTTTTTATTTTTACTAGAGTAAAAAATAATTTATGATATTGAAAATATTTTTCAAAATCAAAATTATTATTTTTTTGGGTGGTGGTGGGGGTGGGGTGGGGGCAGGGCGGGGGGAGGGGGAGGGGATAGGAGTGAAAAAATAAAAATTTGAATTTGATAGTATTTTTAAAAAACAAAATTAATTTTTTTGGGGATTGGGGTGGGTGGGGGCTGGTAGGGGGGCTGGCCGGGAGTGGGGGGGAGGGGTAGGAGTTAAAAAATAAAAAATTTGAAGTTGAAAATATTTTTAAAAAGCAAAATTAATTTTTTGAGGAGGGGTTGGGGTTGGGGTTGGGGGGGGCTGGCCGGGGGTTAGGGTCAAGGATCTGGTGAAAAAATAAAATTTTGAAATTGAAAATATTTATTTAAATTGATGATTTTCCCAAAAAAAAGTAATTTGAAATTGGAGGTGAGTTATGGAAAATGTTTTCCTTAATTTTTGAAGGGAAGTCATTTTCCTTAATTTTGAGGAAAATGAGTTGATTTGGAAATCATTTTCCGAAACTTTTGTCCCAACCAAACATGTGGAAATTGGAAAACATTTTCCAGAAAATGTTTTCCTTCATACCAAACACACTCTCTGTCCCCTCAAGGTGGAATCTCACATTCAGAAGGCACTTGAATGATTGAGAAGTGGGTAGATTTGTTGAGTTATTACAAGTGCTTAGTGGTTTCTTAGGTTTATCTACAGGATCAGACACAATGAGGTGGGAACATGACAGTGATGACTAGTTCTTATTAAGAAGACTCTAGAGAAATGAAGTGGTGGAGCAACCAGGAAGGAGGGGACATACCAGGTCCTTGGAAACAGATTTGGAAGTGCAGTGTCCCAAACAAGGTGCACTTGGTTGGTGACCTGAAGAGCATGTCTCACTGATGAAAAATTGGAAAGGAGGGGCTTTCAGATGGTATCCAGATGTTTTGTTTTTGGGCTAGGAGAATGAAGAAACTAATAATCATCTTTTCTTCATTGGAAGATTGTATCACAGATCTGGTCTGTGTTTCCAAGTATATCTCGAGCAAATTGGGTAACGCCTGAACACATTGCTGACCTACTTAGCTGATGCATAAGGAGTGGAGGGAGGGAACAGAGTCAGAAGGGACGGTAAGATAATACCATATTGCATATAGTGGTCAGTATGGAGAGAAGAAACAACAGATGCTTTGAGGATATCTCTAACCCAATCTAGATAATCAAAGAAAATTGTATGAATATTTTGTATTTTTGATGTAAAGAAAGGGTTTAGAAATAGCAGAGCAGTTAGCAGATATTTTAGGATGTTTGTACATTTCTGAATTTTGCTCACCTGCACATGCAAATACTCTTTGATTTGTTACTTCTTAAAATTGGGAAATTGACAAGGTTTTCCACATGGTACAACACACGGCATGGAGTTTGGGCTGAAACAGCCCGTCATGTATCTAAGAATGTGAGAGCCGCTTTAATATAGAACTTTGGTTGGGTATGTCCGCTAGCTAGCCCTTTCAGTATTTGCGAGTTGCACACTTGTTCTGAATATAGCTCACCTGCACATCCATATACTCCTTTGATTTGTTACTTCTTGAAATTGAGAAATTGACAAGGTTTTCTACATGGTACACATGGCATGAAGTTTGGGCTGACACGGCCCATCACGTGTCTTTAAGAATGTGAACTTCCCTTTAATATAGAACTTTGTCTGGTATGTCTGTTAGCTAGCCCTTTCAGCATTTGCGAGTTGCACAGTTTTGTTCTGAATTCTGCTCACCTGCACATGCAAATATGCTTTGATTAGTTACTTCTTGAAATTGAGAAATTGACAAGGTTTTCCACATGATACACATGACATGAAGTTTTTTAGCTTGTCACTTGTCTAAGAATGTGAATGTGTCTCTTTAATATAGAACTTTGTCTTGTGTATCTGCTAGCTATCCCTTTCAACATTTGTGAGTTGCACACTTCTGTTCTGAATTTTGCTCACCTGCACATGCAAATACTCTTTGATTTGTTACTTCTTGAAATTGAGAAATTGACAAGATTTTTCACATGGTACACATGGCACTAATTTTGGGCTAAAACATCTGGTCATGTTACAAGAATGTGAAATGTCGCTTTAATATAGAACTTTGTCTGGTATGTCTGCTAGCTAGCCCTTTCAGCATTTGCATGTTGCACACTTCTGTTCTAAATTTCGCTCACCTGCACATGCAAATACTGGTTGATTTGTTACTTCTTGAAATTTAGAAATTTACAAGGTTTTCACATGGTACATATTTCATGAAGTATGGGCTGATACAGCCCGTCATGTGTCTAAGAATGTGAACGTCCCTTTAGTATAGAACTTTATCTGGTATGTCTGCTAGTTAGCCCTCCCCCATTTTCCTTCTTGAATGCCTCTCCTCATCCTAAAATGGAGACAAGAACACCAACTTGAATTTTCTTTACTTTAGTAGTCTTTTTTTTTCTTCATCTTGTTTGTGTTCATCTCTTGCTTGTTGCTCTTTTTGATAAGGTAATGTTTTAATTAATGATTGGAGAAATCCCATATACAAGCCATACACCAAAAAATAAAGAATGTAAACCAAAATATTGTTCTCTACGAAAGGAAAACCAATCATCTATAAAACAGGCACCTTATGGGTGGTGTCATCTTATTTGTATTCACGTCTTTGCTTGTTGCTTATGTAGTTTATACAATTGTTGTTTATGTTTTGATGCATCATTTCACTTCTTGTGGCTCTAATGATGCACTTGATTATATTGAACTAACAGGTTGGAGCAAAAGATCACCAGCGTTTCCAAGCATCTTATGCAATTTTGCTGAAGGCCCGGTTGACTGCACTAAAGAAGAGGGAGAGGAAGGACAAGAGGAAGGCTACTGATTCTGACAAAAAGATGGATATTTCGAAAAAGAAATCTGCTGCTGCTAAAGCCTCTACATGAAACTTTAGTCCTTTGGTTTATTCCCCCATTTTGTTTCTAGGATAGAGTTGTAGGATTTGAACCCCATCCATTTGGGGCGACAAGTCTGAAACTTCATTACAACTCCACTGCATAGAATGAAGAAAGGAGGTGTTTTTACTCAATTTGATTATTCACATCTAAATTAGTCAAACTTTTTAAAGAGCTTGTTGGGTTATGGAACAGTTGAAGGAATTTTGTCATAATCTTGATCTTTTAATTCCTTGAACAACAGCTTTGGC</genome_strand>
        <mrna_strand>TTTCTTTGACCCATCGCTTCTCTTCATCGCTGTGTTGAAGTTTTGGTTTTTGAGTTTTGAGATTTGCTGTTCGAAGATG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCGATTACAGCCAGACCCATTCCTCAATGAACTGACGAGTATGTTTGAGCGAACTACTGAGCATGGTTCCGTTTGGGTTACGCTTAAACACT............................................................................................CTTCTGATAAATCTAAAGCCCAACGGAATAAGATGAAGACAGCTGGTGAAACTCTTGAATTTAAGTGCCTCATCCGAGCAACTGATGGGAAAAAGAATATTTCCACAATG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGGAGCAAAAGATCACCAGCGTTTCCAAGCATCTTATGCAATTTTGCTGAAGGCCCGGTTGACTGCACTAAAGAAGAGGGAGAGGAAGGACAAGAGGAAGGCTACTGATTCTGACAAAAAGATGGATATTTCGAAAAAGAAATCTGCTGCTGCTAAAGCCTCTACATGAAACTTTAGTCCTTTGGTTTATTCCCCCATTTTGTTTCTAGGATAGAGTTGTAGGATTTGAACCCCATCCATTTGGGGCGACAAGTCTGAAACTTCATTACAACTCCACTGCATAGAATGAAGAAAGGAGGTGTTTTTACTCAATTTGATTATTCACATCTAAATTAGTCAAACTTTTTAAAGAGCTTGTTGGGTTATGGAACAGTTGAAGGAATTTTGTCATAATCTTGATCTTTTAATTCCTTGAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E308642" ref_strand="+" ref_description="SGN-E308642 [cLEZ-13-C15]">
      <seq>tttctttgacccatcgcttctcttcatcgctgtgttgaagttttggtttttgagttttgagatttgctgttcgaagatggtgcgattacagccagacccattcctcaatgaactgacgagtatgtttgagcgaactactgagcatggttccgtttgggttacgcttaaacactcttctgataaatctaaagcccaacggaataagatgaagacagctggtgaaactcttgaatttaagtgcctcatccgagcaactgatgggaaaaagaatatttccacaatggttggagcaaaagatcaccagcgtttccaagcatcttatgcaattttgctgaaggcccggttgactgcactaaagaagagggagaggaaggacaagaggaaggctactgattctgacaaaaagatggatatttcgaaaaagaaatctgctgctgctaaagcctctacatgaaactttagtcctttggtttattcccccattttgtttctaggatagagttgtaggatttgaaccccatccatttggggcgacaagtctgaaact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0167M06.1" temp_strand="+" temp_description="C06HBa0167M06.1  AC211057.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0167M06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="73681" stop="83052"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="73981" g_stop="74059" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="79" r_length="79" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="74060" i_stop="74824" i_length="765">
            <donor d_prob="0.726" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="74825" g_stop="74918" g_length="94"/>
          <reference_exon_boundary r_type="cDNA" r_start="80" r_stop="173" r_length="94" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="74919" i_stop="75010" i_length="92">
            <donor d_prob="0.958" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="75011" g_stop="75120" g_length="110"/>
          <reference_exon_boundary r_type="cDNA" r_start="174" r_stop="283" r_length="110" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="75121" i_stop="82488" i_length="7368">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="82489" g_stop="82752" g_length="264"/>
          <reference_exon_boundary r_type="cDNA" r_start="284" r_stop="547" r_length="264" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0167M06.1" gen_strand="+" ref_id="SGN-E308642" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>547</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0167M06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E308642" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="73981" e_stop="74059"/>
          <exon e_start="74825" e_stop="74918"/>
          <exon e_start="75011" e_stop="75120"/>
          <exon e_start="82489" e_stop="82752"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCTTTGACCCATCGCTTCTCTTCATCGCTGTGTTGAAGTTTTGGTTTTTGAGTTTTGAGATTTGCTGTTCGAAGATGGTAAGCGCTAACTTCAACTCATCAAAATCAATTGATCGCAATACTCTTTCGAATCAAATCTGGAAATCAAACAATGTAGAATTTTTTGATGTTAATTTTTCTTTGTTTACGCCGTTTTCAGCTTTATTTGATCTATATTTCCTTTTTGAGATTATGGGTTTCTGTAGAGTATAAATTCATGTTAGATTCTTTGTGTTCTTGAGTTGTTATGTATGTATCCCGAATCTCACTATATTGAATTGTGGAAATTAGTTAATACCAGTTTAAAATGGTGCTTATCGATTGAATTAACTAATTGGGGGTTGAGGTGATGGAAAACTTTCCCACTTAGCATTATACTCGAGTGCTGATGAATTTGATGTGTAGGTTAGAAAATTTGTTGAATCTGATGTTTTTACTTCATCCTTTAACTGGATAAAGGAGGAGGATTACATGGGTTGGGTTGATAGCCAGCGTAGAAATAAGCGAAATTACAGGAATCTTCTAAGTCTACACACTGGTTTCATCCTTGCTTTCTCTCCTGAGCACACACTCAAGCTACCCAACTACTGTATTTCTTCCTCCTTTATTCAGGTGGCACTGGTGAAGCATGCTCACATTGTTTATGTTAAGTAATCACATTGTGGAGTTCAATGTGCTTCCTATTTGTGGATACAAAATTATATGGCATTTTGCTTATTTTTGGGAAGTTTGAAAGAAGTGGCTTTGTCCATCTTTTTGGTAGAACATAAGTTGACAATTACTGATCTGAATTGGATTTGTCAGGTGCGATTACAGCCAGACCCATTCCTCAATGAACTGACGAGTATGTTTGAGCGAACTACTGAGCATGGTTCCGTTTGGGTTACGCTTAAACACTGTGAGTTTGCCTCTTCGTTGGTTTTCCTGTGTTTTGTGCTTTGTATTCTCTTTATGAGTAATACTGATTGAGCAATCTTGTCCTTTGTATAGCTTCTGATAAATCTAAAGCCCAACGGAATAAGATGAAGACAGCTGGTGAAACTCTTGAATTTAAGTGCCTCATCCGAGCAACTGATGGGAAAAAGAATATTTCCACAATGGTAATTATCACAATAGAAAGTCTCTTACCTTTTTCCATCACCTTCTTTTTGCAAGTCTTGTCGTTTTCCCCATTTTTTTGCTTTGTTGGGCACTATGTTCTCTGGAACATTGAGGGTGTTAGTTTGTTGTATGAATTATTTTTTAGCATAAGTTTAAATGTGCAAATATAGATAATTCTAGGTCCTGGCCTGTATGTTTGAGATTGAGAGCATCAAATTCAAAAAAAGGATGGTAGCCTTGTGGTGCATAGAGAATGGGAGTCGTGGTCCTTGTTTACTTGATTGATAACTAATAGGTATCGTACATGCTTGTAATACAATATTAGAGCACATAAAGGGACAATTTCTCATAAAAGGCAAACAAATTATGGATGCAACTCTTTTAGTCAGTGAACCTGTGGATTCTAGACTCGAAGGTGAAGATCCAGGGATCATGTGAAACCTAGCTATAGAGAACCCATTATGATCATGTCAACTGGGAGTTACTTCTCAACCTTCTTTAAAAAATGGGTTTTGGTGGAAGATGGTTAAAGTGGATGGTTTTTGTATCAATACTGTCCTGAATTCTAGTCATAGGAGAAATTGCTGGAATTTTCCCTCAGAGAAAGAGGACTCGGGGAGACCCCCCTCTCTTTGCCTTTTCATATTAGCTATGGAAGGTTTCAGTAGTATGATGAGAGGTACTATTCAGAACAGTGGATAAAAGGTTTCAGGATAGGCAATCAAGCAGGGGAAGAGATGTAGATTTCCTTTCATTATTGCTGATGATATAGTTGTTTTCTAAGATGCTAAAGCAGATCAGATCATGTACATCAGAATGATTTTGGTGATCTTTGGGCAATTTTTGGTCCATTTGTAAAATTGGAGGAAAGGTAGTAGTTTCCCTGTCAAAGAAGTTCCACAAATTCAATGCCTGTCCATGTTATAAGTTTCGATGATTTAACAAACTATGACATCTAGTTGGGGACCTGATCCCATGAGGGACTGAGAGTTTCAGGCAATGTGCAAAGGACAGTTGTAAAGCTGCAACTGCTGCCACAATTGCAGTGGTTGGTGCACCTTTTCAGAGGAATAGTACTCAGCCAATGGCGTTGCACTAGGTAGTTTGTCCATCTTATAATAGTCATCTTGTCAAGGGACGTTTCCTAATTTTTGAGTTGAAGATTTCCATACGGCAAAATCCACTCTCAAAAAGAAATATTCTCATATGCATCAAGAGATCTGATCGAGTGATCTACTGTTCCCTTTAGTTGTTATTTTAGTTTATCGTCTCGTGTTTATACAGTGTAAGATCTGTTCATATGTTATAAAGGAATCAGATCATTTCAGTTGTAATCGTTGTTAAAAGTTTGAGTTGTAGCTAGAGTTAGCTATGTCGTGTTCTTGAAGTCTACATTAACTTAGCTTGTTGGCGTAGTAGGCAATAGAGGTATTACTTTGTTTATGAGTAACAAAGCTGTTACGAAAGGAGAAGGGATTAAGAGTTCATTTCCTAGGTTGCAAGAGTTTGTAATCGGGATCTTAACTCTTTGAAGTAATGGAATTGGCGAAATCCTGTGAGACAGGTTGTGATTTTCTCCTTCCTTAAGCAAGGGGGTTAACACGTAAACATTTTGTGTTCTTTATTTTAAGTTTTTCTTTCTGCACTGTTCTTACTATGTGAACGGACTTGGTCCATTGACTTGTGGTGGACGCATGTAAGTCATCAGTCCAACATCTTGAGTTGTAAAATTGAGAATTTCCCGACCAACTTACTTGGGGATGCCCCTTGGAAACAATCATAAGGAGCTAGAAGTTTGGGATGAGATTATTGAAAAAATTAGTAACCAAACTCAAAATGTGTTGAGCGCTCGACTTGCTTTATGTGCGCTTCGGTGTCGTCACCAGTGTTCTAAGACATATTTTTCCTTGCCAATGTGTCTCTGCCGAAGAGGTGACACTAAACAATTGATATTTCACTTAATCACATTTTTTTTGAAAAGGTACTTTATCATTATTTTTTTCGATTTCTTCAGTCATATATTTGTTATTTGTGTTTATAATTATTCGTCTTGGACTCAGCATATATATTTGTAATTTTTTCTCCCTTTGTGCCTTTTTTCATTAAAGCCCATTCTTTGTTTGCACATAAAGGTCCAATGGGCCTTAGAGTTTTTTTGCGCTTTTCGCGTTTGATAACACTTGAAAAACTAGCCAATTGGAAAGCCCGATGTTTATCTCTTGGAGGAAGTAGTACTCTTATGAACTCAGTATTGGACTCATTGCCAACACATGTCATGTCCTTATTTCTAATGCCTTCAGGTGGAGGATACCATACAAGTTGAGGACTTTCTATGTTAGGTAATAAGGAGGGCAGAGGTATTCACTAAGTGAAATGCCAAACTGCTCAGCTTATGGTTGACTTGGTATTAGGAATCTGGGGCTTCAAAACAGATGCTTATTGACAAAATGGAGGTTTGTTGGTGAGGATCATGCACTCTGGAAGGAAGTAACTATAAAAATATGGGCAGAGTAACTATTTGTGTTCTAATATGGTCTATGTTGGCTGGGAATATAGACTGTAGTGTGTGGAATGACACCTAGATCCTTTTTCCGAGAGATAAATGGATTGGACTCGAGCCTTTAATGAGCTCATTTTCGGAACTGTTCTCATTTTGTAGCAACTCTGAAGCATCAATAGTTGACACTCTGGGTGTGTTTGTGTCACGACCCAAACCGGGTTGCGACTGGCACCCACACTTACCCTCCTATGTGAGCGAACCAACCAATCTAAACCTTAACATTTCAATGTAATAACAGTAGAAAATAATGCGGAAGACTTAACTCATTAATAAAATCAATTCAATAACTATCAATATTCAACATCTATTATTCCCAAAACCTGGAAGTCATCATCACAAGAACATCTACGATCAAATGACTAAACTAAGAGTATTCTAAAAGCTAAAAATACATAAGAAGCTAGTCCATGCCGGAAGTTCAAGGCATCAAGACTTGAAGAAGAAGATCCAGTCCAAGCTAGAAGCATTAGCTCACCCTGAATTTCCGATGTAGTAAGACTGGCTTGAATTACTGTTGAGTTGAAGACGATGGCACGTTTGCTGCACTCCACAAATAAACAAGAAGAAAACATAAAAGTAGGGGTCAGTACAAAACACGGGTACTGAGTAGATATCATCGGCCAACTCAAAATAGGGAACAGTATATATCAATATTATCGTAAATCAACTATAAAACTCAACATGTAGCCACAACAAGTATTATAATCATCAATAAGTACCATCAAGTTCATCCATGAGGGCTCAAGCCTCAACACCATACTCATTTGGGAATTATGTTCGTTAGATTGAGTATATTAACATCTTTCAAGATTCATTATCTTTAATTCTCTTGTGTCGGTACGTGACACTCCGATCCCTCATATTCATTATTCCTCTTGTGTCGGTACGTGACACTCTGATCCCCTATATCTACGTGTCGGTTCGTGACACCCGATCCCCTACATCATTCTGTAAATCATCAGGCCTTCTCTATACCAAGGTATCATCAATCCTATTACTTTAATTCATCAAGCCTTCTTCTATACCAAGGCATCATCATTAATAATGTATATTAAAGTTTCCTTTCAAGATTTGGGATTCAATATTTTCATCATGCTTATCTTATCACAATCACATAATCATATTCACGCAAACATACAATTAAGCTTATAGTAGGGTTTACAATACTACCAATACATATCATTCTCTATTAAGAGTTTACTATGAAAGCATGAAAACCATAACCTACCTCCACCGAAGAGTTGAATCAAGCAAGAATTTTCCCAAAGCTTTGTTTCTCCCTTCTCGTTCGATTTTCTCTCTCTCTCTTGTTCTTTCTATTTTCTTTATTCAAACCCTCTTTCTTTTACCCTAATTAGTATATAATTAAGAATAAAAGATGGCAATAATACCCCACTAATTAACTTAGGGTTACCTCTTTTAACCCCTCAAGAATTTGAGTTATTAATATAACCCCACGAACTTTATAATTAAGGCAAGAATAGTCAAAAACGTCCCTTAAAACTTAACCAGAAATCCGACTCTGCCTGGGATTTGCGCAACCTGTGACGGGCCGTCGTGCCTGCGACGGTCCGTCCTGCAGGTCGTCGCAGAGTTCAGAGACCCAAATTTCCACCAAGGGTCTGTGACGGTCCGTCACACCTGTGACGGTCCGTCCTGCCATTCCGTCACAAAGTTCAGAGAGTCGATTTTTAGTACCCAATTTCAGATTTTCTAAGTGTTTTGAAACGAGACCCTGCGACGGTCCCTCGTGCCCTTGACGGTCCGTCGTGGGGTCCGTCGCTTCTGCCAGTTTTTCCAGAATTGAAGTCTGTTGCTCAAAACGACTAAACGGGTCGTTACAGTTTGGTATGGAGGAAAATGTTTTCCATGGAAAATGTTTTCCTAGAAAATGTTTTCCTGGAAAACAAGTAAATTTTGGACTTATTTTCTCATGTTTGGTTGGTGAGTAGAAAATATTTTCTGGATATGATTTTTAGTGTTTGATTTATGAATGAAAAATGTTTTTGAGAGACATTTTTTATTTTTACTAGAGTAAAAAATAATTTATGATATTGAAAATATTTTTCAAAATCAAAATTATTATTTTTTTGGGTGGTGGTGGGGGTGGGGTGGGGGCAGGGCGGGGGGAGGGGGAGGGGATAGGAGTGAAAAAATAAAAATTTGAATTTGATAGTATTTTTAAAAAACAAAATTAATTTTTTTGGGGATTGGGGTGGGTGGGGGCTGGTAGGGGGGCTGGCCGGGAGTGGGGGGGAGGGGTAGGAGTTAAAAAATAAAAAATTTGAAGTTGAAAATATTTTTAAAAAGCAAAATTAATTTTTTGAGGAGGGGTTGGGGTTGGGGTTGGGGGGGGCTGGCCGGGGGTTAGGGTCAAGGATCTGGTGAAAAAATAAAATTTTGAAATTGAAAATATTTATTTAAATTGATGATTTTCCCAAAAAAAAGTAATTTGAAATTGGAGGTGAGTTATGGAAAATGTTTTCCTTAATTTTTGAAGGGAAGTCATTTTCCTTAATTTTGAGGAAAATGAGTTGATTTGGAAATCATTTTCCGAAACTTTTGTCCCAACCAAACATGTGGAAATTGGAAAACATTTTCCAGAAAATGTTTTCCTTCATACCAAACACACTCTCTGTCCCCTCAAGGTGGAATCTCACATTCAGAAGGCACTTGAATGATTGAGAAGTGGGTAGATTTGTTGAGTTATTACAAGTGCTTAGTGGTTTCTTAGGTTTATCTACAGGATCAGACACAATGAGGTGGGAACATGACAGTGATGACTAGTTCTTATTAAGAAGACTCTAGAGAAATGAAGTGGTGGAGCAACCAGGAAGGAGGGGACATACCAGGTCCTTGGAAACAGATTTGGAAGTGCAGTGTCCCAAACAAGGTGCACTTGGTTGGTGACCTGAAGAGCATGTCTCACTGATGAAAAATTGGAAAGGAGGGGCTTTCAGATGGTATCCAGATGTTTTGTTTTTGGGCTAGGAGAATGAAGAAACTAATAATCATCTTTTCTTCATTGGAAGATTGTATCACAGATCTGGTCTGTGTTTCCAAGTATATCTCGAGCAAATTGGGTAACGCCTGAACACATTGCTGACCTACTTAGCTGATGCATAAGGAGTGGAGGGAGGGAACAGAGTCAGAAGGGACGGTAAGATAATACCATATTGCATATAGTGGTCAGTATGGAGAGAAGAAACAACAGATGCTTTGAGGATATCTCTAACCCAATCTAGATAATCAAAGAAAATTGTATGAATATTTTGTATTTTTGATGTAAAGAAAGGGTTTAGAAATAGCAGAGCAGTTAGCAGATATTTTAGGATGTTTGTACATTTCTGAATTTTGCTCACCTGCACATGCAAATACTCTTTGATTTGTTACTTCTTAAAATTGGGAAATTGACAAGGTTTTCCACATGGTACAACACACGGCATGGAGTTTGGGCTGAAACAGCCCGTCATGTATCTAAGAATGTGAGAGCCGCTTTAATATAGAACTTTGGTTGGGTATGTCCGCTAGCTAGCCCTTTCAGTATTTGCGAGTTGCACACTTGTTCTGAATATAGCTCACCTGCACATCCATATACTCCTTTGATTTGTTACTTCTTGAAATTGAGAAATTGACAAGGTTTTCTACATGGTACACATGGCATGAAGTTTGGGCTGACACGGCCCATCACGTGTCTTTAAGAATGTGAACTTCCCTTTAATATAGAACTTTGTCTGGTATGTCTGTTAGCTAGCCCTTTCAGCATTTGCGAGTTGCACAGTTTTGTTCTGAATTCTGCTCACCTGCACATGCAAATATGCTTTGATTAGTTACTTCTTGAAATTGAGAAATTGACAAGGTTTTCCACATGATACACATGACATGAAGTTTTTTAGCTTGTCACTTGTCTAAGAATGTGAATGTGTCTCTTTAATATAGAACTTTGTCTTGTGTATCTGCTAGCTATCCCTTTCAACATTTGTGAGTTGCACACTTCTGTTCTGAATTTTGCTCACCTGCACATGCAAATACTCTTTGATTTGTTACTTCTTGAAATTGAGAAATTGACAAGATTTTTCACATGGTACACATGGCACTAATTTTGGGCTAAAACATCTGGTCATGTTACAAGAATGTGAAATGTCGCTTTAATATAGAACTTTGTCTGGTATGTCTGCTAGCTAGCCCTTTCAGCATTTGCATGTTGCACACTTCTGTTCTAAATTTCGCTCACCTGCACATGCAAATACTGGTTGATTTGTTACTTCTTGAAATTTAGAAATTTACAAGGTTTTCACATGGTACATATTTCATGAAGTATGGGCTGATACAGCCCGTCATGTGTCTAAGAATGTGAACGTCCCTTTAGTATAGAACTTTATCTGGTATGTCTGCTAGTTAGCCCTCCCCCATTTTCCTTCTTGAATGCCTCTCCTCATCCTAAAATGGAGACAAGAACACCAACTTGAATTTTCTTTACTTTAGTAGTCTTTTTTTTTCTTCATCTTGTTTGTGTTCATCTCTTGCTTGTTGCTCTTTTTGATAAGGTAATGTTTTAATTAATGATTGGAGAAATCCCATATACAAGCCATACACCAAAAAATAAAGAATGTAAACCAAAATATTGTTCTCTACGAAAGGAAAACCAATCATCTATAAAACAGGCACCTTATGGGTGGTGTCATCTTATTTGTATTCACGTCTTTGCTTGTTGCTTATGTAGTTTATACAATTGTTGTTTATGTTTTGATGCATCATTTCACTTCTTGTGGCTCTAATGATGCACTTGATTATATTGAACTAACAGGTTGGAGCAAAAGATCACCAGCGTTTCCAAGCATCTTATGCAATTTTGCTGAAGGCCCGGTTGACTGCACTAAAGAAGAGGGAGAGGAAGGACAAGAGGAAGGCTACTGATTCTGACAAAAAGATGGATATTTCGAAAAAGAAATCTGCTGCTGCTAAAGCCTCTACATGAAACTTTAGTCCTTTGGTTTATTCCCCCATTTTGTTTCTAGGATAGAGTTGTAGGATTTGAACCCCATCCATTTGGGGCGACAAGTCTGAAACT</genome_strand>
        <mrna_strand>TTTCTTTGACCCATCGCTTCTCTTCATCGCTGTGTTGAAGTTTTGGTTTTTGAGTTTTGAGATTTGCTGTTCGAAGATG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCGATTACAGCCAGACCCATTCCTCAATGAACTGACGAGTATGTTTGAGCGAACTACTGAGCATGGTTCCGTTTGGGTTACGCTTAAACACT............................................................................................CTTCTGATAAATCTAAAGCCCAACGGAATAAGATGAAGACAGCTGGTGAAACTCTTGAATTTAAGTGCCTCATCCGAGCAACTGATGGGAAAAAGAATATTTCCACAATG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGGAGCAAAAGATCACCAGCGTTTCCAAGCATCTTATGCAATTTTGCTGAAGGCCCGGTTGACTGCACTAAAGAAGAGGGAGAGGAAGGACAAGAGGAAGGCTACTGATTCTGACAAAAAGATGGATATTTCGAAAAAGAAATCTGCTGCTGCTAAAGCCTCTACATGAAACTTTAGTCCTTTGGTTTATTCCCCCATTTTGTTTCTAGGATAGAGTTGTAGGATTTGAACCCCATCCATTTGGGGCGACAAGTCTGAAACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E307521" ref_strand="+" ref_description="SGN-E307521 [cLEY-24-O7]">
      <seq>tttctttgacccatcgcttctcttcatcgctgtgttgaagttttggtttttgagttttgagatttgctgttcgaagatggtgcgattacagccagacccattcctcaatgaactgacgagtatgtttgagcgaactactgagcatggttccgtttgggttacgcttaaacactcttctgataaatctaaagcccaacggaataagatgaagacagctggtgaaactcttgaatttaagtgcctcatccgagcaactgatgggaaaaagaatatttccacaatggttggagcaaaagatcaccagcgtttccaagcatcttatgcaattttgctgaaggcccggttgactgcactaaagaagagggagaggaaggacaagaggaatgctactgattctgacaaaaagatggatatttcgaaaaagaaatctgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0167M06.1" temp_strand="+" temp_description="C06HBa0167M06.1  AC211057.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0167M06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="73681" stop="82938"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="73981" g_stop="74059" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="79" r_length="79" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="74060" i_stop="74824" i_length="765">
            <donor d_prob="0.726" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="74825" g_stop="74918" g_length="94"/>
          <reference_exon_boundary r_type="cDNA" r_start="80" r_stop="173" r_length="94" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="74919" i_stop="75010" i_length="92">
            <donor d_prob="0.958" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="75011" g_stop="75120" g_length="110"/>
          <reference_exon_boundary r_type="cDNA" r_start="174" r_stop="283" r_length="110" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="75121" i_stop="82488" i_length="7368">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="82489" g_stop="82638" g_length="150"/>
          <reference_exon_boundary r_type="cDNA" r_start="284" r_stop="433" r_length="150" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0167M06.1" gen_strand="+" ref_id="SGN-E307521" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>433</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0167M06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E307521" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="73981" e_stop="74059"/>
          <exon e_start="74825" e_stop="74918"/>
          <exon e_start="75011" e_stop="75120"/>
          <exon e_start="82489" e_stop="82638"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCTTTGACCCATCGCTTCTCTTCATCGCTGTGTTGAAGTTTTGGTTTTTGAGTTTTGAGATTTGCTGTTCGAAGATGGTAAGCGCTAACTTCAACTCATCAAAATCAATTGATCGCAATACTCTTTCGAATCAAATCTGGAAATCAAACAATGTAGAATTTTTTGATGTTAATTTTTCTTTGTTTACGCCGTTTTCAGCTTTATTTGATCTATATTTCCTTTTTGAGATTATGGGTTTCTGTAGAGTATAAATTCATGTTAGATTCTTTGTGTTCTTGAGTTGTTATGTATGTATCCCGAATCTCACTATATTGAATTGTGGAAATTAGTTAATACCAGTTTAAAATGGTGCTTATCGATTGAATTAACTAATTGGGGGTTGAGGTGATGGAAAACTTTCCCACTTAGCATTATACTCGAGTGCTGATGAATTTGATGTGTAGGTTAGAAAATTTGTTGAATCTGATGTTTTTACTTCATCCTTTAACTGGATAAAGGAGGAGGATTACATGGGTTGGGTTGATAGCCAGCGTAGAAATAAGCGAAATTACAGGAATCTTCTAAGTCTACACACTGGTTTCATCCTTGCTTTCTCTCCTGAGCACACACTCAAGCTACCCAACTACTGTATTTCTTCCTCCTTTATTCAGGTGGCACTGGTGAAGCATGCTCACATTGTTTATGTTAAGTAATCACATTGTGGAGTTCAATGTGCTTCCTATTTGTGGATACAAAATTATATGGCATTTTGCTTATTTTTGGGAAGTTTGAAAGAAGTGGCTTTGTCCATCTTTTTGGTAGAACATAAGTTGACAATTACTGATCTGAATTGGATTTGTCAGGTGCGATTACAGCCAGACCCATTCCTCAATGAACTGACGAGTATGTTTGAGCGAACTACTGAGCATGGTTCCGTTTGGGTTACGCTTAAACACTGTGAGTTTGCCTCTTCGTTGGTTTTCCTGTGTTTTGTGCTTTGTATTCTCTTTATGAGTAATACTGATTGAGCAATCTTGTCCTTTGTATAGCTTCTGATAAATCTAAAGCCCAACGGAATAAGATGAAGACAGCTGGTGAAACTCTTGAATTTAAGTGCCTCATCCGAGCAACTGATGGGAAAAAGAATATTTCCACAATGGTAATTATCACAATAGAAAGTCTCTTACCTTTTTCCATCACCTTCTTTTTGCAAGTCTTGTCGTTTTCCCCATTTTTTTGCTTTGTTGGGCACTATGTTCTCTGGAACATTGAGGGTGTTAGTTTGTTGTATGAATTATTTTTTAGCATAAGTTTAAATGTGCAAATATAGATAATTCTAGGTCCTGGCCTGTATGTTTGAGATTGAGAGCATCAAATTCAAAAAAAGGATGGTAGCCTTGTGGTGCATAGAGAATGGGAGTCGTGGTCCTTGTTTACTTGATTGATAACTAATAGGTATCGTACATGCTTGTAATACAATATTAGAGCACATAAAGGGACAATTTCTCATAAAAGGCAAACAAATTATGGATGCAACTCTTTTAGTCAGTGAACCTGTGGATTCTAGACTCGAAGGTGAAGATCCAGGGATCATGTGAAACCTAGCTATAGAGAACCCATTATGATCATGTCAACTGGGAGTTACTTCTCAACCTTCTTTAAAAAATGGGTTTTGGTGGAAGATGGTTAAAGTGGATGGTTTTTGTATCAATACTGTCCTGAATTCTAGTCATAGGAGAAATTGCTGGAATTTTCCCTCAGAGAAAGAGGACTCGGGGAGACCCCCCTCTCTTTGCCTTTTCATATTAGCTATGGAAGGTTTCAGTAGTATGATGAGAGGTACTATTCAGAACAGTGGATAAAAGGTTTCAGGATAGGCAATCAAGCAGGGGAAGAGATGTAGATTTCCTTTCATTATTGCTGATGATATAGTTGTTTTCTAAGATGCTAAAGCAGATCAGATCATGTACATCAGAATGATTTTGGTGATCTTTGGGCAATTTTTGGTCCATTTGTAAAATTGGAGGAAAGGTAGTAGTTTCCCTGTCAAAGAAGTTCCACAAATTCAATGCCTGTCCATGTTATAAGTTTCGATGATTTAACAAACTATGACATCTAGTTGGGGACCTGATCCCATGAGGGACTGAGAGTTTCAGGCAATGTGCAAAGGACAGTTGTAAAGCTGCAACTGCTGCCACAATTGCAGTGGTTGGTGCACCTTTTCAGAGGAATAGTACTCAGCCAATGGCGTTGCACTAGGTAGTTTGTCCATCTTATAATAGTCATCTTGTCAAGGGACGTTTCCTAATTTTTGAGTTGAAGATTTCCATACGGCAAAATCCACTCTCAAAAAGAAATATTCTCATATGCATCAAGAGATCTGATCGAGTGATCTACTGTTCCCTTTAGTTGTTATTTTAGTTTATCGTCTCGTGTTTATACAGTGTAAGATCTGTTCATATGTTATAAAGGAATCAGATCATTTCAGTTGTAATCGTTGTTAAAAGTTTGAGTTGTAGCTAGAGTTAGCTATGTCGTGTTCTTGAAGTCTACATTAACTTAGCTTGTTGGCGTAGTAGGCAATAGAGGTATTACTTTGTTTATGAGTAACAAAGCTGTTACGAAAGGAGAAGGGATTAAGAGTTCATTTCCTAGGTTGCAAGAGTTTGTAATCGGGATCTTAACTCTTTGAAGTAATGGAATTGGCGAAATCCTGTGAGACAGGTTGTGATTTTCTCCTTCCTTAAGCAAGGGGGTTAACACGTAAACATTTTGTGTTCTTTATTTTAAGTTTTTCTTTCTGCACTGTTCTTACTATGTGAACGGACTTGGTCCATTGACTTGTGGTGGACGCATGTAAGTCATCAGTCCAACATCTTGAGTTGTAAAATTGAGAATTTCCCGACCAACTTACTTGGGGATGCCCCTTGGAAACAATCATAAGGAGCTAGAAGTTTGGGATGAGATTATTGAAAAAATTAGTAACCAAACTCAAAATGTGTTGAGCGCTCGACTTGCTTTATGTGCGCTTCGGTGTCGTCACCAGTGTTCTAAGACATATTTTTCCTTGCCAATGTGTCTCTGCCGAAGAGGTGACACTAAACAATTGATATTTCACTTAATCACATTTTTTTTGAAAAGGTACTTTATCATTATTTTTTTCGATTTCTTCAGTCATATATTTGTTATTTGTGTTTATAATTATTCGTCTTGGACTCAGCATATATATTTGTAATTTTTTCTCCCTTTGTGCCTTTTTTCATTAAAGCCCATTCTTTGTTTGCACATAAAGGTCCAATGGGCCTTAGAGTTTTTTTGCGCTTTTCGCGTTTGATAACACTTGAAAAACTAGCCAATTGGAAAGCCCGATGTTTATCTCTTGGAGGAAGTAGTACTCTTATGAACTCAGTATTGGACTCATTGCCAACACATGTCATGTCCTTATTTCTAATGCCTTCAGGTGGAGGATACCATACAAGTTGAGGACTTTCTATGTTAGGTAATAAGGAGGGCAGAGGTATTCACTAAGTGAAATGCCAAACTGCTCAGCTTATGGTTGACTTGGTATTAGGAATCTGGGGCTTCAAAACAGATGCTTATTGACAAAATGGAGGTTTGTTGGTGAGGATCATGCACTCTGGAAGGAAGTAACTATAAAAATATGGGCAGAGTAACTATTTGTGTTCTAATATGGTCTATGTTGGCTGGGAATATAGACTGTAGTGTGTGGAATGACACCTAGATCCTTTTTCCGAGAGATAAATGGATTGGACTCGAGCCTTTAATGAGCTCATTTTCGGAACTGTTCTCATTTTGTAGCAACTCTGAAGCATCAATAGTTGACACTCTGGGTGTGTTTGTGTCACGACCCAAACCGGGTTGCGACTGGCACCCACACTTACCCTCCTATGTGAGCGAACCAACCAATCTAAACCTTAACATTTCAATGTAATAACAGTAGAAAATAATGCGGAAGACTTAACTCATTAATAAAATCAATTCAATAACTATCAATATTCAACATCTATTATTCCCAAAACCTGGAAGTCATCATCACAAGAACATCTACGATCAAATGACTAAACTAAGAGTATTCTAAAAGCTAAAAATACATAAGAAGCTAGTCCATGCCGGAAGTTCAAGGCATCAAGACTTGAAGAAGAAGATCCAGTCCAAGCTAGAAGCATTAGCTCACCCTGAATTTCCGATGTAGTAAGACTGGCTTGAATTACTGTTGAGTTGAAGACGATGGCACGTTTGCTGCACTCCACAAATAAACAAGAAGAAAACATAAAAGTAGGGGTCAGTACAAAACACGGGTACTGAGTAGATATCATCGGCCAACTCAAAATAGGGAACAGTATATATCAATATTATCGTAAATCAACTATAAAACTCAACATGTAGCCACAACAAGTATTATAATCATCAATAAGTACCATCAAGTTCATCCATGAGGGCTCAAGCCTCAACACCATACTCATTTGGGAATTATGTTCGTTAGATTGAGTATATTAACATCTTTCAAGATTCATTATCTTTAATTCTCTTGTGTCGGTACGTGACACTCCGATCCCTCATATTCATTATTCCTCTTGTGTCGGTACGTGACACTCTGATCCCCTATATCTACGTGTCGGTTCGTGACACCCGATCCCCTACATCATTCTGTAAATCATCAGGCCTTCTCTATACCAAGGTATCATCAATCCTATTACTTTAATTCATCAAGCCTTCTTCTATACCAAGGCATCATCATTAATAATGTATATTAAAGTTTCCTTTCAAGATTTGGGATTCAATATTTTCATCATGCTTATCTTATCACAATCACATAATCATATTCACGCAAACATACAATTAAGCTTATAGTAGGGTTTACAATACTACCAATACATATCATTCTCTATTAAGAGTTTACTATGAAAGCATGAAAACCATAACCTACCTCCACCGAAGAGTTGAATCAAGCAAGAATTTTCCCAAAGCTTTGTTTCTCCCTTCTCGTTCGATTTTCTCTCTCTCTCTTGTTCTTTCTATTTTCTTTATTCAAACCCTCTTTCTTTTACCCTAATTAGTATATAATTAAGAATAAAAGATGGCAATAATACCCCACTAATTAACTTAGGGTTACCTCTTTTAACCCCTCAAGAATTTGAGTTATTAATATAACCCCACGAACTTTATAATTAAGGCAAGAATAGTCAAAAACGTCCCTTAAAACTTAACCAGAAATCCGACTCTGCCTGGGATTTGCGCAACCTGTGACGGGCCGTCGTGCCTGCGACGGTCCGTCCTGCAGGTCGTCGCAGAGTTCAGAGACCCAAATTTCCACCAAGGGTCTGTGACGGTCCGTCACACCTGTGACGGTCCGTCCTGCCATTCCGTCACAAAGTTCAGAGAGTCGATTTTTAGTACCCAATTTCAGATTTTCTAAGTGTTTTGAAACGAGACCCTGCGACGGTCCCTCGTGCCCTTGACGGTCCGTCGTGGGGTCCGTCGCTTCTGCCAGTTTTTCCAGAATTGAAGTCTGTTGCTCAAAACGACTAAACGGGTCGTTACAGTTTGGTATGGAGGAAAATGTTTTCCATGGAAAATGTTTTCCTAGAAAATGTTTTCCTGGAAAACAAGTAAATTTTGGACTTATTTTCTCATGTTTGGTTGGTGAGTAGAAAATATTTTCTGGATATGATTTTTAGTGTTTGATTTATGAATGAAAAATGTTTTTGAGAGACATTTTTTATTTTTACTAGAGTAAAAAATAATTTATGATATTGAAAATATTTTTCAAAATCAAAATTATTATTTTTTTGGGTGGTGGTGGGGGTGGGGTGGGGGCAGGGCGGGGGGAGGGGGAGGGGATAGGAGTGAAAAAATAAAAATTTGAATTTGATAGTATTTTTAAAAAACAAAATTAATTTTTTTGGGGATTGGGGTGGGTGGGGGCTGGTAGGGGGGCTGGCCGGGAGTGGGGGGGAGGGGTAGGAGTTAAAAAATAAAAAATTTGAAGTTGAAAATATTTTTAAAAAGCAAAATTAATTTTTTGAGGAGGGGTTGGGGTTGGGGTTGGGGGGGGCTGGCCGGGGGTTAGGGTCAAGGATCTGGTGAAAAAATAAAATTTTGAAATTGAAAATATTTATTTAAATTGATGATTTTCCCAAAAAAAAGTAATTTGAAATTGGAGGTGAGTTATGGAAAATGTTTTCCTTAATTTTTGAAGGGAAGTCATTTTCCTTAATTTTGAGGAAAATGAGTTGATTTGGAAATCATTTTCCGAAACTTTTGTCCCAACCAAACATGTGGAAATTGGAAAACATTTTCCAGAAAATGTTTTCCTTCATACCAAACACACTCTCTGTCCCCTCAAGGTGGAATCTCACATTCAGAAGGCACTTGAATGATTGAGAAGTGGGTAGATTTGTTGAGTTATTACAAGTGCTTAGTGGTTTCTTAGGTTTATCTACAGGATCAGACACAATGAGGTGGGAACATGACAGTGATGACTAGTTCTTATTAAGAAGACTCTAGAGAAATGAAGTGGTGGAGCAACCAGGAAGGAGGGGACATACCAGGTCCTTGGAAACAGATTTGGAAGTGCAGTGTCCCAAACAAGGTGCACTTGGTTGGTGACCTGAAGAGCATGTCTCACTGATGAAAAATTGGAAAGGAGGGGCTTTCAGATGGTATCCAGATGTTTTGTTTTTGGGCTAGGAGAATGAAGAAACTAATAATCATCTTTTCTTCATTGGAAGATTGTATCACAGATCTGGTCTGTGTTTCCAAGTATATCTCGAGCAAATTGGGTAACGCCTGAACACATTGCTGACCTACTTAGCTGATGCATAAGGAGTGGAGGGAGGGAACAGAGTCAGAAGGGACGGTAAGATAATACCATATTGCATATAGTGGTCAGTATGGAGAGAAGAAACAACAGATGCTTTGAGGATATCTCTAACCCAATCTAGATAATCAAAGAAAATTGTATGAATATTTTGTATTTTTGATGTAAAGAAAGGGTTTAGAAATAGCAGAGCAGTTAGCAGATATTTTAGGATGTTTGTACATTTCTGAATTTTGCTCACCTGCACATGCAAATACTCTTTGATTTGTTACTTCTTAAAATTGGGAAATTGACAAGGTTTTCCACATGGTACAACACACGGCATGGAGTTTGGGCTGAAACAGCCCGTCATGTATCTAAGAATGTGAGAGCCGCTTTAATATAGAACTTTGGTTGGGTATGTCCGCTAGCTAGCCCTTTCAGTATTTGCGAGTTGCACACTTGTTCTGAATATAGCTCACCTGCACATCCATATACTCCTTTGATTTGTTACTTCTTGAAATTGAGAAATTGACAAGGTTTTCTACATGGTACACATGGCATGAAGTTTGGGCTGACACGGCCCATCACGTGTCTTTAAGAATGTGAACTTCCCTTTAATATAGAACTTTGTCTGGTATGTCTGTTAGCTAGCCCTTTCAGCATTTGCGAGTTGCACAGTTTTGTTCTGAATTCTGCTCACCTGCACATGCAAATATGCTTTGATTAGTTACTTCTTGAAATTGAGAAATTGACAAGGTTTTCCACATGATACACATGACATGAAGTTTTTTAGCTTGTCACTTGTCTAAGAATGTGAATGTGTCTCTTTAATATAGAACTTTGTCTTGTGTATCTGCTAGCTATCCCTTTCAACATTTGTGAGTTGCACACTTCTGTTCTGAATTTTGCTCACCTGCACATGCAAATACTCTTTGATTTGTTACTTCTTGAAATTGAGAAATTGACAAGATTTTTCACATGGTACACATGGCACTAATTTTGGGCTAAAACATCTGGTCATGTTACAAGAATGTGAAATGTCGCTTTAATATAGAACTTTGTCTGGTATGTCTGCTAGCTAGCCCTTTCAGCATTTGCATGTTGCACACTTCTGTTCTAAATTTCGCTCACCTGCACATGCAAATACTGGTTGATTTGTTACTTCTTGAAATTTAGAAATTTACAAGGTTTTCACATGGTACATATTTCATGAAGTATGGGCTGATACAGCCCGTCATGTGTCTAAGAATGTGAACGTCCCTTTAGTATAGAACTTTATCTGGTATGTCTGCTAGTTAGCCCTCCCCCATTTTCCTTCTTGAATGCCTCTCCTCATCCTAAAATGGAGACAAGAACACCAACTTGAATTTTCTTTACTTTAGTAGTCTTTTTTTTTCTTCATCTTGTTTGTGTTCATCTCTTGCTTGTTGCTCTTTTTGATAAGGTAATGTTTTAATTAATGATTGGAGAAATCCCATATACAAGCCATACACCAAAAAATAAAGAATGTAAACCAAAATATTGTTCTCTACGAAAGGAAAACCAATCATCTATAAAACAGGCACCTTATGGGTGGTGTCATCTTATTTGTATTCACGTCTTTGCTTGTTGCTTATGTAGTTTATACAATTGTTGTTTATGTTTTGATGCATCATTTCACTTCTTGTGGCTCTAATGATGCACTTGATTATATTGAACTAACAGGTTGGAGCAAAAGATCACCAGCGTTTCCAAGCATCTTATGCAATTTTGCTGAAGGCCCGGTTGACTGCACTAAAGAAGAGGGAGAGGAAGGACAAGAGGAAGGCTACTGATTCTGACAAAAAGATGGATATTTCGAAAAAGAAATCTGCT</genome_strand>
        <mrna_strand>TTTCTTTGACCCATCGCTTCTCTTCATCGCTGTGTTGAAGTTTTGGTTTTTGAGTTTTGAGATTTGCTGTTCGAAGATG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCGATTACAGCCAGACCCATTCCTCAATGAACTGACGAGTATGTTTGAGCGAACTACTGAGCATGGTTCCGTTTGGGTTACGCTTAAACACT............................................................................................CTTCTGATAAATCTAAAGCCCAACGGAATAAGATGAAGACAGCTGGTGAAACTCTTGAATTTAAGTGCCTCATCCGAGCAACTGATGGGAAAAAGAATATTTCCACAATG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGGAGCAAAAGATCACCAGCGTTTCCAAGCATCTTATGCAATTTTGCTGAAGGCCCGGTTGACTGCACTAAAGAAGAGGGAGAGGAAGGACAAGAGGAATGCTACTGATTCTGACAAAAAGATGGATATTTCGAAAAAGAAATCTGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E335619" ref_strand="+" ref_description="SGN-E335619 [cTOE-8-G14]">
      <seq>tttctttgacccatcgcttctcttcatcgctgtgttgaagttttggtttttgagttttgagatttgctgttcgaagatggtgcgattacagccagacccattcctcaatgaactgacgagtatgtttgagcgaactactgagcatggttccgtttgggttacgcttaaacactcttctgataaatctaaagcccaacggaataagatgaagaccgctggtgaaactcttgaatttaagtgcctcatccgagcaactgatgggaaaaagaatatttccacaatggttggagcaaaagatcaccagcgtttccaagcatcttatgcaattttgctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0167M06.1" temp_strand="+" temp_description="C06HBa0167M06.1  AC211057.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0167M06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="73681" stop="82839"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="73981" g_stop="74059" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="79" r_length="79" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="74060" i_stop="74824" i_length="765">
            <donor d_prob="0.726" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="74825" g_stop="74918" g_length="94"/>
          <reference_exon_boundary r_type="cDNA" r_start="80" r_stop="173" r_length="94" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="74919" i_stop="75010" i_length="92">
            <donor d_prob="0.958" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="75011" g_stop="75120" g_length="110"/>
          <reference_exon_boundary r_type="cDNA" r_start="174" r_stop="283" r_length="110" r_score="0.991"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="75121" i_stop="82488" i_length="7368">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="82489" g_stop="82539" g_length="51"/>
          <reference_exon_boundary r_type="cDNA" r_start="284" r_stop="334" r_length="51" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0167M06.1" gen_strand="+" ref_id="SGN-E335619" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>334</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0167M06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E335619" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="73981" e_stop="74059"/>
          <exon e_start="74825" e_stop="74918"/>
          <exon e_start="75011" e_stop="75120"/>
          <exon e_start="82489" e_stop="82539"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCTTTGACCCATCGCTTCTCTTCATCGCTGTGTTGAAGTTTTGGTTTTTGAGTTTTGAGATTTGCTGTTCGAAGATGGTAAGCGCTAACTTCAACTCATCAAAATCAATTGATCGCAATACTCTTTCGAATCAAATCTGGAAATCAAACAATGTAGAATTTTTTGATGTTAATTTTTCTTTGTTTACGCCGTTTTCAGCTTTATTTGATCTATATTTCCTTTTTGAGATTATGGGTTTCTGTAGAGTATAAATTCATGTTAGATTCTTTGTGTTCTTGAGTTGTTATGTATGTATCCCGAATCTCACTATATTGAATTGTGGAAATTAGTTAATACCAGTTTAAAATGGTGCTTATCGATTGAATTAACTAATTGGGGGTTGAGGTGATGGAAAACTTTCCCACTTAGCATTATACTCGAGTGCTGATGAATTTGATGTGTAGGTTAGAAAATTTGTTGAATCTGATGTTTTTACTTCATCCTTTAACTGGATAAAGGAGGAGGATTACATGGGTTGGGTTGATAGCCAGCGTAGAAATAAGCGAAATTACAGGAATCTTCTAAGTCTACACACTGGTTTCATCCTTGCTTTCTCTCCTGAGCACACACTCAAGCTACCCAACTACTGTATTTCTTCCTCCTTTATTCAGGTGGCACTGGTGAAGCATGCTCACATTGTTTATGTTAAGTAATCACATTGTGGAGTTCAATGTGCTTCCTATTTGTGGATACAAAATTATATGGCATTTTGCTTATTTTTGGGAAGTTTGAAAGAAGTGGCTTTGTCCATCTTTTTGGTAGAACATAAGTTGACAATTACTGATCTGAATTGGATTTGTCAGGTGCGATTACAGCCAGACCCATTCCTCAATGAACTGACGAGTATGTTTGAGCGAACTACTGAGCATGGTTCCGTTTGGGTTACGCTTAAACACTGTGAGTTTGCCTCTTCGTTGGTTTTCCTGTGTTTTGTGCTTTGTATTCTCTTTATGAGTAATACTGATTGAGCAATCTTGTCCTTTGTATAGCTTCTGATAAATCTAAAGCCCAACGGAATAAGATGAAGACAGCTGGTGAAACTCTTGAATTTAAGTGCCTCATCCGAGCAACTGATGGGAAAAAGAATATTTCCACAATGGTAATTATCACAATAGAAAGTCTCTTACCTTTTTCCATCACCTTCTTTTTGCAAGTCTTGTCGTTTTCCCCATTTTTTTGCTTTGTTGGGCACTATGTTCTCTGGAACATTGAGGGTGTTAGTTTGTTGTATGAATTATTTTTTAGCATAAGTTTAAATGTGCAAATATAGATAATTCTAGGTCCTGGCCTGTATGTTTGAGATTGAGAGCATCAAATTCAAAAAAAGGATGGTAGCCTTGTGGTGCATAGAGAATGGGAGTCGTGGTCCTTGTTTACTTGATTGATAACTAATAGGTATCGTACATGCTTGTAATACAATATTAGAGCACATAAAGGGACAATTTCTCATAAAAGGCAAACAAATTATGGATGCAACTCTTTTAGTCAGTGAACCTGTGGATTCTAGACTCGAAGGTGAAGATCCAGGGATCATGTGAAACCTAGCTATAGAGAACCCATTATGATCATGTCAACTGGGAGTTACTTCTCAACCTTCTTTAAAAAATGGGTTTTGGTGGAAGATGGTTAAAGTGGATGGTTTTTGTATCAATACTGTCCTGAATTCTAGTCATAGGAGAAATTGCTGGAATTTTCCCTCAGAGAAAGAGGACTCGGGGAGACCCCCCTCTCTTTGCCTTTTCATATTAGCTATGGAAGGTTTCAGTAGTATGATGAGAGGTACTATTCAGAACAGTGGATAAAAGGTTTCAGGATAGGCAATCAAGCAGGGGAAGAGATGTAGATTTCCTTTCATTATTGCTGATGATATAGTTGTTTTCTAAGATGCTAAAGCAGATCAGATCATGTACATCAGAATGATTTTGGTGATCTTTGGGCAATTTTTGGTCCATTTGTAAAATTGGAGGAAAGGTAGTAGTTTCCCTGTCAAAGAAGTTCCACAAATTCAATGCCTGTCCATGTTATAAGTTTCGATGATTTAACAAACTATGACATCTAGTTGGGGACCTGATCCCATGAGGGACTGAGAGTTTCAGGCAATGTGCAAAGGACAGTTGTAAAGCTGCAACTGCTGCCACAATTGCAGTGGTTGGTGCACCTTTTCAGAGGAATAGTACTCAGCCAATGGCGTTGCACTAGGTAGTTTGTCCATCTTATAATAGTCATCTTGTCAAGGGACGTTTCCTAATTTTTGAGTTGAAGATTTCCATACGGCAAAATCCACTCTCAAAAAGAAATATTCTCATATGCATCAAGAGATCTGATCGAGTGATCTACTGTTCCCTTTAGTTGTTATTTTAGTTTATCGTCTCGTGTTTATACAGTGTAAGATCTGTTCATATGTTATAAAGGAATCAGATCATTTCAGTTGTAATCGTTGTTAAAAGTTTGAGTTGTAGCTAGAGTTAGCTATGTCGTGTTCTTGAAGTCTACATTAACTTAGCTTGTTGGCGTAGTAGGCAATAGAGGTATTACTTTGTTTATGAGTAACAAAGCTGTTACGAAAGGAGAAGGGATTAAGAGTTCATTTCCTAGGTTGCAAGAGTTTGTAATCGGGATCTTAACTCTTTGAAGTAATGGAATTGGCGAAATCCTGTGAGACAGGTTGTGATTTTCTCCTTCCTTAAGCAAGGGGGTTAACACGTAAACATTTTGTGTTCTTTATTTTAAGTTTTTCTTTCTGCACTGTTCTTACTATGTGAACGGACTTGGTCCATTGACTTGTGGTGGACGCATGTAAGTCATCAGTCCAACATCTTGAGTTGTAAAATTGAGAATTTCCCGACCAACTTACTTGGGGATGCCCCTTGGAAACAATCATAAGGAGCTAGAAGTTTGGGATGAGATTATTGAAAAAATTAGTAACCAAACTCAAAATGTGTTGAGCGCTCGACTTGCTTTATGTGCGCTTCGGTGTCGTCACCAGTGTTCTAAGACATATTTTTCCTTGCCAATGTGTCTCTGCCGAAGAGGTGACACTAAACAATTGATATTTCACTTAATCACATTTTTTTTGAAAAGGTACTTTATCATTATTTTTTTCGATTTCTTCAGTCATATATTTGTTATTTGTGTTTATAATTATTCGTCTTGGACTCAGCATATATATTTGTAATTTTTTCTCCCTTTGTGCCTTTTTTCATTAAAGCCCATTCTTTGTTTGCACATAAAGGTCCAATGGGCCTTAGAGTTTTTTTGCGCTTTTCGCGTTTGATAACACTTGAAAAACTAGCCAATTGGAAAGCCCGATGTTTATCTCTTGGAGGAAGTAGTACTCTTATGAACTCAGTATTGGACTCATTGCCAACACATGTCATGTCCTTATTTCTAATGCCTTCAGGTGGAGGATACCATACAAGTTGAGGACTTTCTATGTTAGGTAATAAGGAGGGCAGAGGTATTCACTAAGTGAAATGCCAAACTGCTCAGCTTATGGTTGACTTGGTATTAGGAATCTGGGGCTTCAAAACAGATGCTTATTGACAAAATGGAGGTTTGTTGGTGAGGATCATGCACTCTGGAAGGAAGTAACTATAAAAATATGGGCAGAGTAACTATTTGTGTTCTAATATGGTCTATGTTGGCTGGGAATATAGACTGTAGTGTGTGGAATGACACCTAGATCCTTTTTCCGAGAGATAAATGGATTGGACTCGAGCCTTTAATGAGCTCATTTTCGGAACTGTTCTCATTTTGTAGCAACTCTGAAGCATCAATAGTTGACACTCTGGGTGTGTTTGTGTCACGACCCAAACCGGGTTGCGACTGGCACCCACACTTACCCTCCTATGTGAGCGAACCAACCAATCTAAACCTTAACATTTCAATGTAATAACAGTAGAAAATAATGCGGAAGACTTAACTCATTAATAAAATCAATTCAATAACTATCAATATTCAACATCTATTATTCCCAAAACCTGGAAGTCATCATCACAAGAACATCTACGATCAAATGACTAAACTAAGAGTATTCTAAAAGCTAAAAATACATAAGAAGCTAGTCCATGCCGGAAGTTCAAGGCATCAAGACTTGAAGAAGAAGATCCAGTCCAAGCTAGAAGCATTAGCTCACCCTGAATTTCCGATGTAGTAAGACTGGCTTGAATTACTGTTGAGTTGAAGACGATGGCACGTTTGCTGCACTCCACAAATAAACAAGAAGAAAACATAAAAGTAGGGGTCAGTACAAAACACGGGTACTGAGTAGATATCATCGGCCAACTCAAAATAGGGAACAGTATATATCAATATTATCGTAAATCAACTATAAAACTCAACATGTAGCCACAACAAGTATTATAATCATCAATAAGTACCATCAAGTTCATCCATGAGGGCTCAAGCCTCAACACCATACTCATTTGGGAATTATGTTCGTTAGATTGAGTATATTAACATCTTTCAAGATTCATTATCTTTAATTCTCTTGTGTCGGTACGTGACACTCCGATCCCTCATATTCATTATTCCTCTTGTGTCGGTACGTGACACTCTGATCCCCTATATCTACGTGTCGGTTCGTGACACCCGATCCCCTACATCATTCTGTAAATCATCAGGCCTTCTCTATACCAAGGTATCATCAATCCTATTACTTTAATTCATCAAGCCTTCTTCTATACCAAGGCATCATCATTAATAATGTATATTAAAGTTTCCTTTCAAGATTTGGGATTCAATATTTTCATCATGCTTATCTTATCACAATCACATAATCATATTCACGCAAACATACAATTAAGCTTATAGTAGGGTTTACAATACTACCAATACATATCATTCTCTATTAAGAGTTTACTATGAAAGCATGAAAACCATAACCTACCTCCACCGAAGAGTTGAATCAAGCAAGAATTTTCCCAAAGCTTTGTTTCTCCCTTCTCGTTCGATTTTCTCTCTCTCTCTTGTTCTTTCTATTTTCTTTATTCAAACCCTCTTTCTTTTACCCTAATTAGTATATAATTAAGAATAAAAGATGGCAATAATACCCCACTAATTAACTTAGGGTTACCTCTTTTAACCCCTCAAGAATTTGAGTTATTAATATAACCCCACGAACTTTATAATTAAGGCAAGAATAGTCAAAAACGTCCCTTAAAACTTAACCAGAAATCCGACTCTGCCTGGGATTTGCGCAACCTGTGACGGGCCGTCGTGCCTGCGACGGTCCGTCCTGCAGGTCGTCGCAGAGTTCAGAGACCCAAATTTCCACCAAGGGTCTGTGACGGTCCGTCACACCTGTGACGGTCCGTCCTGCCATTCCGTCACAAAGTTCAGAGAGTCGATTTTTAGTACCCAATTTCAGATTTTCTAAGTGTTTTGAAACGAGACCCTGCGACGGTCCCTCGTGCCCTTGACGGTCCGTCGTGGGGTCCGTCGCTTCTGCCAGTTTTTCCAGAATTGAAGTCTGTTGCTCAAAACGACTAAACGGGTCGTTACAGTTTGGTATGGAGGAAAATGTTTTCCATGGAAAATGTTTTCCTAGAAAATGTTTTCCTGGAAAACAAGTAAATTTTGGACTTATTTTCTCATGTTTGGTTGGTGAGTAGAAAATATTTTCTGGATATGATTTTTAGTGTTTGATTTATGAATGAAAAATGTTTTTGAGAGACATTTTTTATTTTTACTAGAGTAAAAAATAATTTATGATATTGAAAATATTTTTCAAAATCAAAATTATTATTTTTTTGGGTGGTGGTGGGGGTGGGGTGGGGGCAGGGCGGGGGGAGGGGGAGGGGATAGGAGTGAAAAAATAAAAATTTGAATTTGATAGTATTTTTAAAAAACAAAATTAATTTTTTTGGGGATTGGGGTGGGTGGGGGCTGGTAGGGGGGCTGGCCGGGAGTGGGGGGGAGGGGTAGGAGTTAAAAAATAAAAAATTTGAAGTTGAAAATATTTTTAAAAAGCAAAATTAATTTTTTGAGGAGGGGTTGGGGTTGGGGTTGGGGGGGGCTGGCCGGGGGTTAGGGTCAAGGATCTGGTGAAAAAATAAAATTTTGAAATTGAAAATATTTATTTAAATTGATGATTTTCCCAAAAAAAAGTAATTTGAAATTGGAGGTGAGTTATGGAAAATGTTTTCCTTAATTTTTGAAGGGAAGTCATTTTCCTTAATTTTGAGGAAAATGAGTTGATTTGGAAATCATTTTCCGAAACTTTTGTCCCAACCAAACATGTGGAAATTGGAAAACATTTTCCAGAAAATGTTTTCCTTCATACCAAACACACTCTCTGTCCCCTCAAGGTGGAATCTCACATTCAGAAGGCACTTGAATGATTGAGAAGTGGGTAGATTTGTTGAGTTATTACAAGTGCTTAGTGGTTTCTTAGGTTTATCTACAGGATCAGACACAATGAGGTGGGAACATGACAGTGATGACTAGTTCTTATTAAGAAGACTCTAGAGAAATGAAGTGGTGGAGCAACCAGGAAGGAGGGGACATACCAGGTCCTTGGAAACAGATTTGGAAGTGCAGTGTCCCAAACAAGGTGCACTTGGTTGGTGACCTGAAGAGCATGTCTCACTGATGAAAAATTGGAAAGGAGGGGCTTTCAGATGGTATCCAGATGTTTTGTTTTTGGGCTAGGAGAATGAAGAAACTAATAATCATCTTTTCTTCATTGGAAGATTGTATCACAGATCTGGTCTGTGTTTCCAAGTATATCTCGAGCAAATTGGGTAACGCCTGAACACATTGCTGACCTACTTAGCTGATGCATAAGGAGTGGAGGGAGGGAACAGAGTCAGAAGGGACGGTAAGATAATACCATATTGCATATAGTGGTCAGTATGGAGAGAAGAAACAACAGATGCTTTGAGGATATCTCTAACCCAATCTAGATAATCAAAGAAAATTGTATGAATATTTTGTATTTTTGATGTAAAGAAAGGGTTTAGAAATAGCAGAGCAGTTAGCAGATATTTTAGGATGTTTGTACATTTCTGAATTTTGCTCACCTGCACATGCAAATACTCTTTGATTTGTTACTTCTTAAAATTGGGAAATTGACAAGGTTTTCCACATGGTACAACACACGGCATGGAGTTTGGGCTGAAACAGCCCGTCATGTATCTAAGAATGTGAGAGCCGCTTTAATATAGAACTTTGGTTGGGTATGTCCGCTAGCTAGCCCTTTCAGTATTTGCGAGTTGCACACTTGTTCTGAATATAGCTCACCTGCACATCCATATACTCCTTTGATTTGTTACTTCTTGAAATTGAGAAATTGACAAGGTTTTCTACATGGTACACATGGCATGAAGTTTGGGCTGACACGGCCCATCACGTGTCTTTAAGAATGTGAACTTCCCTTTAATATAGAACTTTGTCTGGTATGTCTGTTAGCTAGCCCTTTCAGCATTTGCGAGTTGCACAGTTTTGTTCTGAATTCTGCTCACCTGCACATGCAAATATGCTTTGATTAGTTACTTCTTGAAATTGAGAAATTGACAAGGTTTTCCACATGATACACATGACATGAAGTTTTTTAGCTTGTCACTTGTCTAAGAATGTGAATGTGTCTCTTTAATATAGAACTTTGTCTTGTGTATCTGCTAGCTATCCCTTTCAACATTTGTGAGTTGCACACTTCTGTTCTGAATTTTGCTCACCTGCACATGCAAATACTCTTTGATTTGTTACTTCTTGAAATTGAGAAATTGACAAGATTTTTCACATGGTACACATGGCACTAATTTTGGGCTAAAACATCTGGTCATGTTACAAGAATGTGAAATGTCGCTTTAATATAGAACTTTGTCTGGTATGTCTGCTAGCTAGCCCTTTCAGCATTTGCATGTTGCACACTTCTGTTCTAAATTTCGCTCACCTGCACATGCAAATACTGGTTGATTTGTTACTTCTTGAAATTTAGAAATTTACAAGGTTTTCACATGGTACATATTTCATGAAGTATGGGCTGATACAGCCCGTCATGTGTCTAAGAATGTGAACGTCCCTTTAGTATAGAACTTTATCTGGTATGTCTGCTAGTTAGCCCTCCCCCATTTTCCTTCTTGAATGCCTCTCCTCATCCTAAAATGGAGACAAGAACACCAACTTGAATTTTCTTTACTTTAGTAGTCTTTTTTTTTCTTCATCTTGTTTGTGTTCATCTCTTGCTTGTTGCTCTTTTTGATAAGGTAATGTTTTAATTAATGATTGGAGAAATCCCATATACAAGCCATACACCAAAAAATAAAGAATGTAAACCAAAATATTGTTCTCTACGAAAGGAAAACCAATCATCTATAAAACAGGCACCTTATGGGTGGTGTCATCTTATTTGTATTCACGTCTTTGCTTGTTGCTTATGTAGTTTATACAATTGTTGTTTATGTTTTGATGCATCATTTCACTTCTTGTGGCTCTAATGATGCACTTGATTATATTGAACTAACAGGTTGGAGCAAAAGATCACCAGCGTTTCCAAGCATCTTATGCAATTTTGCTG</genome_strand>
        <mrna_strand>TTTCTTTGACCCATCGCTTCTCTTCATCGCTGTGTTGAAGTTTTGGTTTTTGAGTTTTGAGATTTGCTGTTCGAAGATG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCGATTACAGCCAGACCCATTCCTCAATGAACTGACGAGTATGTTTGAGCGAACTACTGAGCATGGTTCCGTTTGGGTTACGCTTAAACACT............................................................................................CTTCTGATAAATCTAAAGCCCAACGGAATAAGATGAAGACCGCTGGTGAAACTCTTGAATTTAAGTGCCTCATCCGAGCAACTGATGGGAAAAAGAATATTTCCACAATG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGGAGCAAAAGATCACCAGCGTTTCCAAGCATCTTATGCAATTTTGCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E305395" ref_strand="+" ref_description="SGN-E305395 [cLEX-15-I21]">
      <seq>tttctttgacccatcgcttctcttcatcgctgtgttgaagttttggtttttgagttttgagatttgctgttcgaagatggtgcgattacagccagacccattcctcaatgaactgacgagtatgtttgagcgaactactgagcatggttccgtttgggttacgcttaaacactcttctgataaatctaaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0167M06.1" temp_strand="+" temp_description="C06HBa0167M06.1  AC211057.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0167M06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="73681" stop="75220"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="73981" g_stop="74059" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="79" r_length="79" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="74060" i_stop="74824" i_length="765">
            <donor d_prob="0.726" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="74825" g_stop="74918" g_length="94"/>
          <reference_exon_boundary r_type="cDNA" r_start="80" r_stop="173" r_length="94" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="74919" i_stop="75010" i_length="92">
            <donor d_prob="0.958" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="75011" g_stop="75028" g_length="18"/>
          <reference_exon_boundary r_type="cDNA" r_start="174" r_stop="191" r_length="18" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0167M06.1" gen_strand="+" ref_id="SGN-E305395" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>191</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0167M06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E305395" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="73981" e_stop="74059"/>
          <exon e_start="74825" e_stop="74918"/>
          <exon e_start="75011" e_stop="75028"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCTTTGACCCATCGCTTCTCTTCATCGCTGTGTTGAAGTTTTGGTTTTTGAGTTTTGAGATTTGCTGTTCGAAGATGGTAAGCGCTAACTTCAACTCATCAAAATCAATTGATCGCAATACTCTTTCGAATCAAATCTGGAAATCAAACAATGTAGAATTTTTTGATGTTAATTTTTCTTTGTTTACGCCGTTTTCAGCTTTATTTGATCTATATTTCCTTTTTGAGATTATGGGTTTCTGTAGAGTATAAATTCATGTTAGATTCTTTGTGTTCTTGAGTTGTTATGTATGTATCCCGAATCTCACTATATTGAATTGTGGAAATTAGTTAATACCAGTTTAAAATGGTGCTTATCGATTGAATTAACTAATTGGGGGTTGAGGTGATGGAAAACTTTCCCACTTAGCATTATACTCGAGTGCTGATGAATTTGATGTGTAGGTTAGAAAATTTGTTGAATCTGATGTTTTTACTTCATCCTTTAACTGGATAAAGGAGGAGGATTACATGGGTTGGGTTGATAGCCAGCGTAGAAATAAGCGAAATTACAGGAATCTTCTAAGTCTACACACTGGTTTCATCCTTGCTTTCTCTCCTGAGCACACACTCAAGCTACCCAACTACTGTATTTCTTCCTCCTTTATTCAGGTGGCACTGGTGAAGCATGCTCACATTGTTTATGTTAAGTAATCACATTGTGGAGTTCAATGTGCTTCCTATTTGTGGATACAAAATTATATGGCATTTTGCTTATTTTTGGGAAGTTTGAAAGAAGTGGCTTTGTCCATCTTTTTGGTAGAACATAAGTTGACAATTACTGATCTGAATTGGATTTGTCAGGTGCGATTACAGCCAGACCCATTCCTCAATGAACTGACGAGTATGTTTGAGCGAACTACTGAGCATGGTTCCGTTTGGGTTACGCTTAAACACTGTGAGTTTGCCTCTTCGTTGGTTTTCCTGTGTTTTGTGCTTTGTATTCTCTTTATGAGTAATACTGATTGAGCAATCTTGTCCTTTGTATAGCTTCTGATAAATCTAAAG</genome_strand>
        <mrna_strand>TTTCTTTGACCCATCGCTTCTCTTCATCGCTGTGTTGAAGTTTTGGTTTTTGAGTTTTGAGATTTGCTGTTCGAAGATG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCGATTACAGCCAGACCCATTCCTCAATGAACTGACGAGTATGTTTGAGCGAACTACTGAGCATGGTTCCGTTTGGGTTACGCTTAAACACT............................................................................................CTTCTGATAAATCTAAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E287436" ref_strand="+" ref_description="SGN-E287436 [cLES-15-H9]">
      <seq>tttgacccatcgcttctcttcatcgctgtgttgaagttttggtttttgagttttgagatttgctgttcgaagatggtgcgattacagccagacccattcctcaatgaactgacgagtatgtttgagcgaactactgagcatggttccgtttgggttacgcttaaacactcttctgataaatctaaagcccaacggaataagatgaagacagctggtgaaactcttgaatttaagtgcctcatccgagcaactgatgggaaaaagaatatttccacaatggttggagcaaaagatcaccagcgtttccaagcatcttatgcaattttgctgaaggcccggttgactgcactaaagaagagggagaggaaggacaagaggaaggctactgattctgacaaaaagatggatatttcgaaaaagaaatctgctgctgctaaagcctctacatgaaactttagtcctttggtttattcccccattttgtttctaggatagagttgtaggatttgaaccccatccatttggggcgacaagtctgaaacttcattacaactccactgcatagaatgaagaaaggaggtgtttttactcaatttgattattcaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0167M06.1" temp_strand="+" temp_description="C06HBa0167M06.1  AC211057.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0167M06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="73685" stop="83116"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="73985" g_stop="74059" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="75" r_length="75" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="74060" i_stop="74824" i_length="765">
            <donor d_prob="0.726" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="74825" g_stop="74918" g_length="94"/>
          <reference_exon_boundary r_type="cDNA" r_start="76" r_stop="169" r_length="94" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="74919" i_stop="75010" i_length="92">
            <donor d_prob="0.958" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="75011" g_stop="75120" g_length="110"/>
          <reference_exon_boundary r_type="cDNA" r_start="170" r_stop="279" r_length="110" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="75121" i_stop="82488" i_length="7368">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="82489" g_stop="82816" g_length="328"/>
          <reference_exon_boundary r_type="cDNA" r_start="280" r_stop="607" r_length="328" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0167M06.1" gen_strand="+" ref_id="SGN-E287436" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>607</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0167M06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E287436" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="73985" e_stop="74059"/>
          <exon e_start="74825" e_stop="74918"/>
          <exon e_start="75011" e_stop="75120"/>
          <exon e_start="82489" e_stop="82816"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTGACCCATCGCTTCTCTTCATCGCTGTGTTGAAGTTTTGGTTTTTGAGTTTTGAGATTTGCTGTTCGAAGATGGTAAGCGCTAACTTCAACTCATCAAAATCAATTGATCGCAATACTCTTTCGAATCAAATCTGGAAATCAAACAATGTAGAATTTTTTGATGTTAATTTTTCTTTGTTTACGCCGTTTTCAGCTTTATTTGATCTATATTTCCTTTTTGAGATTATGGGTTTCTGTAGAGTATAAATTCATGTTAGATTCTTTGTGTTCTTGAGTTGTTATGTATGTATCCCGAATCTCACTATATTGAATTGTGGAAATTAGTTAATACCAGTTTAAAATGGTGCTTATCGATTGAATTAACTAATTGGGGGTTGAGGTGATGGAAAACTTTCCCACTTAGCATTATACTCGAGTGCTGATGAATTTGATGTGTAGGTTAGAAAATTTGTTGAATCTGATGTTTTTACTTCATCCTTTAACTGGATAAAGGAGGAGGATTACATGGGTTGGGTTGATAGCCAGCGTAGAAATAAGCGAAATTACAGGAATCTTCTAAGTCTACACACTGGTTTCATCCTTGCTTTCTCTCCTGAGCACACACTCAAGCTACCCAACTACTGTATTTCTTCCTCCTTTATTCAGGTGGCACTGGTGAAGCATGCTCACATTGTTTATGTTAAGTAATCACATTGTGGAGTTCAATGTGCTTCCTATTTGTGGATACAAAATTATATGGCATTTTGCTTATTTTTGGGAAGTTTGAAAGAAGTGGCTTTGTCCATCTTTTTGGTAGAACATAAGTTGACAATTACTGATCTGAATTGGATTTGTCAGGTGCGATTACAGCCAGACCCATTCCTCAATGAACTGACGAGTATGTTTGAGCGAACTACTGAGCATGGTTCCGTTTGGGTTACGCTTAAACACTGTGAGTTTGCCTCTTCGTTGGTTTTCCTGTGTTTTGTGCTTTGTATTCTCTTTATGAGTAATACTGATTGAGCAATCTTGTCCTTTGTATAGCTTCTGATAAATCTAAAGCCCAACGGAATAAGATGAAGACAGCTGGTGAAACTCTTGAATTTAAGTGCCTCATCCGAGCAACTGATGGGAAAAAGAATATTTCCACAATGGTAATTATCACAATAGAAAGTCTCTTACCTTTTTCCATCACCTTCTTTTTGCAAGTCTTGTCGTTTTCCCCATTTTTTTGCTTTGTTGGGCACTATGTTCTCTGGAACATTGAGGGTGTTAGTTTGTTGTATGAATTATTTTTTAGCATAAGTTTAAATGTGCAAATATAGATAATTCTAGGTCCTGGCCTGTATGTTTGAGATTGAGAGCATCAAATTCAAAAAAAGGATGGTAGCCTTGTGGTGCATAGAGAATGGGAGTCGTGGTCCTTGTTTACTTGATTGATAACTAATAGGTATCGTACATGCTTGTAATACAATATTAGAGCACATAAAGGGACAATTTCTCATAAAAGGCAAACAAATTATGGATGCAACTCTTTTAGTCAGTGAACCTGTGGATTCTAGACTCGAAGGTGAAGATCCAGGGATCATGTGAAACCTAGCTATAGAGAACCCATTATGATCATGTCAACTGGGAGTTACTTCTCAACCTTCTTTAAAAAATGGGTTTTGGTGGAAGATGGTTAAAGTGGATGGTTTTTGTATCAATACTGTCCTGAATTCTAGTCATAGGAGAAATTGCTGGAATTTTCCCTCAGAGAAAGAGGACTCGGGGAGACCCCCCTCTCTTTGCCTTTTCATATTAGCTATGGAAGGTTTCAGTAGTATGATGAGAGGTACTATTCAGAACAGTGGATAAAAGGTTTCAGGATAGGCAATCAAGCAGGGGAAGAGATGTAGATTTCCTTTCATTATTGCTGATGATATAGTTGTTTTCTAAGATGCTAAAGCAGATCAGATCATGTACATCAGAATGATTTTGGTGATCTTTGGGCAATTTTTGGTCCATTTGTAAAATTGGAGGAAAGGTAGTAGTTTCCCTGTCAAAGAAGTTCCACAAATTCAATGCCTGTCCATGTTATAAGTTTCGATGATTTAACAAACTATGACATCTAGTTGGGGACCTGATCCCATGAGGGACTGAGAGTTTCAGGCAATGTGCAAAGGACAGTTGTAAAGCTGCAACTGCTGCCACAATTGCAGTGGTTGGTGCACCTTTTCAGAGGAATAGTACTCAGCCAATGGCGTTGCACTAGGTAGTTTGTCCATCTTATAATAGTCATCTTGTCAAGGGACGTTTCCTAATTTTTGAGTTGAAGATTTCCATACGGCAAAATCCACTCTCAAAAAGAAATATTCTCATATGCATCAAGAGATCTGATCGAGTGATCTACTGTTCCCTTTAGTTGTTATTTTAGTTTATCGTCTCGTGTTTATACAGTGTAAGATCTGTTCATATGTTATAAAGGAATCAGATCATTTCAGTTGTAATCGTTGTTAAAAGTTTGAGTTGTAGCTAGAGTTAGCTATGTCGTGTTCTTGAAGTCTACATTAACTTAGCTTGTTGGCGTAGTAGGCAATAGAGGTATTACTTTGTTTATGAGTAACAAAGCTGTTACGAAAGGAGAAGGGATTAAGAGTTCATTTCCTAGGTTGCAAGAGTTTGTAATCGGGATCTTAACTCTTTGAAGTAATGGAATTGGCGAAATCCTGTGAGACAGGTTGTGATTTTCTCCTTCCTTAAGCAAGGGGGTTAACACGTAAACATTTTGTGTTCTTTATTTTAAGTTTTTCTTTCTGCACTGTTCTTACTATGTGAACGGACTTGGTCCATTGACTTGTGGTGGACGCATGTAAGTCATCAGTCCAACATCTTGAGTTGTAAAATTGAGAATTTCCCGACCAACTTACTTGGGGATGCCCCTTGGAAACAATCATAAGGAGCTAGAAGTTTGGGATGAGATTATTGAAAAAATTAGTAACCAAACTCAAAATGTGTTGAGCGCTCGACTTGCTTTATGTGCGCTTCGGTGTCGTCACCAGTGTTCTAAGACATATTTTTCCTTGCCAATGTGTCTCTGCCGAAGAGGTGACACTAAACAATTGATATTTCACTTAATCACATTTTTTTTGAAAAGGTACTTTATCATTATTTTTTTCGATTTCTTCAGTCATATATTTGTTATTTGTGTTTATAATTATTCGTCTTGGACTCAGCATATATATTTGTAATTTTTTCTCCCTTTGTGCCTTTTTTCATTAAAGCCCATTCTTTGTTTGCACATAAAGGTCCAATGGGCCTTAGAGTTTTTTTGCGCTTTTCGCGTTTGATAACACTTGAAAAACTAGCCAATTGGAAAGCCCGATGTTTATCTCTTGGAGGAAGTAGTACTCTTATGAACTCAGTATTGGACTCATTGCCAACACATGTCATGTCCTTATTTCTAATGCCTTCAGGTGGAGGATACCATACAAGTTGAGGACTTTCTATGTTAGGTAATAAGGAGGGCAGAGGTATTCACTAAGTGAAATGCCAAACTGCTCAGCTTATGGTTGACTTGGTATTAGGAATCTGGGGCTTCAAAACAGATGCTTATTGACAAAATGGAGGTTTGTTGGTGAGGATCATGCACTCTGGAAGGAAGTAACTATAAAAATATGGGCAGAGTAACTATTTGTGTTCTAATATGGTCTATGTTGGCTGGGAATATAGACTGTAGTGTGTGGAATGACACCTAGATCCTTTTTCCGAGAGATAAATGGATTGGACTCGAGCCTTTAATGAGCTCATTTTCGGAACTGTTCTCATTTTGTAGCAACTCTGAAGCATCAATAGTTGACACTCTGGGTGTGTTTGTGTCACGACCCAAACCGGGTTGCGACTGGCACCCACACTTACCCTCCTATGTGAGCGAACCAACCAATCTAAACCTTAACATTTCAATGTAATAACAGTAGAAAATAATGCGGAAGACTTAACTCATTAATAAAATCAATTCAATAACTATCAATATTCAACATCTATTATTCCCAAAACCTGGAAGTCATCATCACAAGAACATCTACGATCAAATGACTAAACTAAGAGTATTCTAAAAGCTAAAAATACATAAGAAGCTAGTCCATGCCGGAAGTTCAAGGCATCAAGACTTGAAGAAGAAGATCCAGTCCAAGCTAGAAGCATTAGCTCACCCTGAATTTCCGATGTAGTAAGACTGGCTTGAATTACTGTTGAGTTGAAGACGATGGCACGTTTGCTGCACTCCACAAATAAACAAGAAGAAAACATAAAAGTAGGGGTCAGTACAAAACACGGGTACTGAGTAGATATCATCGGCCAACTCAAAATAGGGAACAGTATATATCAATATTATCGTAAATCAACTATAAAACTCAACATGTAGCCACAACAAGTATTATAATCATCAATAAGTACCATCAAGTTCATCCATGAGGGCTCAAGCCTCAACACCATACTCATTTGGGAATTATGTTCGTTAGATTGAGTATATTAACATCTTTCAAGATTCATTATCTTTAATTCTCTTGTGTCGGTACGTGACACTCCGATCCCTCATATTCATTATTCCTCTTGTGTCGGTACGTGACACTCTGATCCCCTATATCTACGTGTCGGTTCGTGACACCCGATCCCCTACATCATTCTGTAAATCATCAGGCCTTCTCTATACCAAGGTATCATCAATCCTATTACTTTAATTCATCAAGCCTTCTTCTATACCAAGGCATCATCATTAATAATGTATATTAAAGTTTCCTTTCAAGATTTGGGATTCAATATTTTCATCATGCTTATCTTATCACAATCACATAATCATATTCACGCAAACATACAATTAAGCTTATAGTAGGGTTTACAATACTACCAATACATATCATTCTCTATTAAGAGTTTACTATGAAAGCATGAAAACCATAACCTACCTCCACCGAAGAGTTGAATCAAGCAAGAATTTTCCCAAAGCTTTGTTTCTCCCTTCTCGTTCGATTTTCTCTCTCTCTCTTGTTCTTTCTATTTTCTTTATTCAAACCCTCTTTCTTTTACCCTAATTAGTATATAATTAAGAATAAAAGATGGCAATAATACCCCACTAATTAACTTAGGGTTACCTCTTTTAACCCCTCAAGAATTTGAGTTATTAATATAACCCCACGAACTTTATAATTAAGGCAAGAATAGTCAAAAACGTCCCTTAAAACTTAACCAGAAATCCGACTCTGCCTGGGATTTGCGCAACCTGTGACGGGCCGTCGTGCCTGCGACGGTCCGTCCTGCAGGTCGTCGCAGAGTTCAGAGACCCAAATTTCCACCAAGGGTCTGTGACGGTCCGTCACACCTGTGACGGTCCGTCCTGCCATTCCGTCACAAAGTTCAGAGAGTCGATTTTTAGTACCCAATTTCAGATTTTCTAAGTGTTTTGAAACGAGACCCTGCGACGGTCCCTCGTGCCCTTGACGGTCCGTCGTGGGGTCCGTCGCTTCTGCCAGTTTTTCCAGAATTGAAGTCTGTTGCTCAAAACGACTAAACGGGTCGTTACAGTTTGGTATGGAGGAAAATGTTTTCCATGGAAAATGTTTTCCTAGAAAATGTTTTCCTGGAAAACAAGTAAATTTTGGACTTATTTTCTCATGTTTGGTTGGTGAGTAGAAAATATTTTCTGGATATGATTTTTAGTGTTTGATTTATGAATGAAAAATGTTTTTGAGAGACATTTTTTATTTTTACTAGAGTAAAAAATAATTTATGATATTGAAAATATTTTTCAAAATCAAAATTATTATTTTTTTGGGTGGTGGTGGGGGTGGGGTGGGGGCAGGGCGGGGGGAGGGGGAGGGGATAGGAGTGAAAAAATAAAAATTTGAATTTGATAGTATTTTTAAAAAACAAAATTAATTTTTTTGGGGATTGGGGTGGGTGGGGGCTGGTAGGGGGGCTGGCCGGGAGTGGGGGGGAGGGGTAGGAGTTAAAAAATAAAAAATTTGAAGTTGAAAATATTTTTAAAAAGCAAAATTAATTTTTTGAGGAGGGGTTGGGGTTGGGGTTGGGGGGGGCTGGCCGGGGGTTAGGGTCAAGGATCTGGTGAAAAAATAAAATTTTGAAATTGAAAATATTTATTTAAATTGATGATTTTCCCAAAAAAAAGTAATTTGAAATTGGAGGTGAGTTATGGAAAATGTTTTCCTTAATTTTTGAAGGGAAGTCATTTTCCTTAATTTTGAGGAAAATGAGTTGATTTGGAAATCATTTTCCGAAACTTTTGTCCCAACCAAACATGTGGAAATTGGAAAACATTTTCCAGAAAATGTTTTCCTTCATACCAAACACACTCTCTGTCCCCTCAAGGTGGAATCTCACATTCAGAAGGCACTTGAATGATTGAGAAGTGGGTAGATTTGTTGAGTTATTACAAGTGCTTAGTGGTTTCTTAGGTTTATCTACAGGATCAGACACAATGAGGTGGGAACATGACAGTGATGACTAGTTCTTATTAAGAAGACTCTAGAGAAATGAAGTGGTGGAGCAACCAGGAAGGAGGGGACATACCAGGTCCTTGGAAACAGATTTGGAAGTGCAGTGTCCCAAACAAGGTGCACTTGGTTGGTGACCTGAAGAGCATGTCTCACTGATGAAAAATTGGAAAGGAGGGGCTTTCAGATGGTATCCAGATGTTTTGTTTTTGGGCTAGGAGAATGAAGAAACTAATAATCATCTTTTCTTCATTGGAAGATTGTATCACAGATCTGGTCTGTGTTTCCAAGTATATCTCGAGCAAATTGGGTAACGCCTGAACACATTGCTGACCTACTTAGCTGATGCATAAGGAGTGGAGGGAGGGAACAGAGTCAGAAGGGACGGTAAGATAATACCATATTGCATATAGTGGTCAGTATGGAGAGAAGAAACAACAGATGCTTTGAGGATATCTCTAACCCAATCTAGATAATCAAAGAAAATTGTATGAATATTTTGTATTTTTGATGTAAAGAAAGGGTTTAGAAATAGCAGAGCAGTTAGCAGATATTTTAGGATGTTTGTACATTTCTGAATTTTGCTCACCTGCACATGCAAATACTCTTTGATTTGTTACTTCTTAAAATTGGGAAATTGACAAGGTTTTCCACATGGTACAACACACGGCATGGAGTTTGGGCTGAAACAGCCCGTCATGTATCTAAGAATGTGAGAGCCGCTTTAATATAGAACTTTGGTTGGGTATGTCCGCTAGCTAGCCCTTTCAGTATTTGCGAGTTGCACACTTGTTCTGAATATAGCTCACCTGCACATCCATATACTCCTTTGATTTGTTACTTCTTGAAATTGAGAAATTGACAAGGTTTTCTACATGGTACACATGGCATGAAGTTTGGGCTGACACGGCCCATCACGTGTCTTTAAGAATGTGAACTTCCCTTTAATATAGAACTTTGTCTGGTATGTCTGTTAGCTAGCCCTTTCAGCATTTGCGAGTTGCACAGTTTTGTTCTGAATTCTGCTCACCTGCACATGCAAATATGCTTTGATTAGTTACTTCTTGAAATTGAGAAATTGACAAGGTTTTCCACATGATACACATGACATGAAGTTTTTTAGCTTGTCACTTGTCTAAGAATGTGAATGTGTCTCTTTAATATAGAACTTTGTCTTGTGTATCTGCTAGCTATCCCTTTCAACATTTGTGAGTTGCACACTTCTGTTCTGAATTTTGCTCACCTGCACATGCAAATACTCTTTGATTTGTTACTTCTTGAAATTGAGAAATTGACAAGATTTTTCACATGGTACACATGGCACTAATTTTGGGCTAAAACATCTGGTCATGTTACAAGAATGTGAAATGTCGCTTTAATATAGAACTTTGTCTGGTATGTCTGCTAGCTAGCCCTTTCAGCATTTGCATGTTGCACACTTCTGTTCTAAATTTCGCTCACCTGCACATGCAAATACTGGTTGATTTGTTACTTCTTGAAATTTAGAAATTTACAAGGTTTTCACATGGTACATATTTCATGAAGTATGGGCTGATACAGCCCGTCATGTGTCTAAGAATGTGAACGTCCCTTTAGTATAGAACTTTATCTGGTATGTCTGCTAGTTAGCCCTCCCCCATTTTCCTTCTTGAATGCCTCTCCTCATCCTAAAATGGAGACAAGAACACCAACTTGAATTTTCTTTACTTTAGTAGTCTTTTTTTTTCTTCATCTTGTTTGTGTTCATCTCTTGCTTGTTGCTCTTTTTGATAAGGTAATGTTTTAATTAATGATTGGAGAAATCCCATATACAAGCCATACACCAAAAAATAAAGAATGTAAACCAAAATATTGTTCTCTACGAAAGGAAAACCAATCATCTATAAAACAGGCACCTTATGGGTGGTGTCATCTTATTTGTATTCACGTCTTTGCTTGTTGCTTATGTAGTTTATACAATTGTTGTTTATGTTTTGATGCATCATTTCACTTCTTGTGGCTCTAATGATGCACTTGATTATATTGAACTAACAGGTTGGAGCAAAAGATCACCAGCGTTTCCAAGCATCTTATGCAATTTTGCTGAAGGCCCGGTTGACTGCACTAAAGAAGAGGGAGAGGAAGGACAAGAGGAAGGCTACTGATTCTGACAAAAAGATGGATATTTCGAAAAAGAAATCTGCTGCTGCTAAAGCCTCTACATGAAACTTTAGTCCTTTGGTTTATTCCCCCATTTTGTTTCTAGGATAGAGTTGTAGGATTTGAACCCCATCCATTTGGGGCGACAAGTCTGAAACTTCATTACAACTCCACTGCATAGAATGAAGAAAGGAGGTGTTTTTACTCAATTTGATTATTCACA</genome_strand>
        <mrna_strand>TTTGACCCATCGCTTCTCTTCATCGCTGTGTTGAAGTTTTGGTTTTTGAGTTTTGAGATTTGCTGTTCGAAGATG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCGATTACAGCCAGACCCATTCCTCAATGAACTGACGAGTATGTTTGAGCGAACTACTGAGCATGGTTCCGTTTGGGTTACGCTTAAACACT............................................................................................CTTCTGATAAATCTAAAGCCCAACGGAATAAGATGAAGACAGCTGGTGAAACTCTTGAATTTAAGTGCCTCATCCGAGCAACTGATGGGAAAAAGAATATTTCCACAATG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGGAGCAAAAGATCACCAGCGTTTCCAAGCATCTTATGCAATTTTGCTGAAGGCCCGGTTGACTGCACTAAAGAAGAGGGAGAGGAAGGACAAGAGGAAGGCTACTGATTCTGACAAAAAGATGGATATTTCGAAAAAGAAATCTGCTGCTGCTAAAGCCTCTACATGAAACTTTAGTCCTTTGGTTTATTCCCCCATTTTGTTTCTAGGATAGAGTTGTAGGATTTGAACCCCATCCATTTGGGGCGACAAGTCTGAAACTTCATTACAACTCCACTGCATAGAATGAAGAAAGGAGGTGTTTTTACTCAATTTGATTATTCACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E335625" ref_strand="+" ref_description="SGN-E335625 [cTOE-8-I18]">
      <seq>tttgacccatcgcttctcttcatcgctgtgtggaagttttggtttttgagttttgagatttgctgttcgaagatggtgcgataacatccatacccattcctcagtgaactgaccagtatgtttgagcgaactactgaccatggttgcgatcgggttacgcttaaacactcttctgatgaatctaaagcccaacggaataagatgaatacagctggtgaaactcttgaatttaagtgccttatccgagcaactgatgggaaaaagaatatttccgcaatggttggagcctaagatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0167M06.1" temp_strand="+" temp_description="C06HBa0167M06.1  AC211057.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0167M06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="73685" stop="75422"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="73985" g_stop="74059" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="75" r_length="75" r_score="0.987"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="74060" i_stop="74824" i_length="765">
            <donor d_prob="0.726" d_score="0.98"/>
            <acceptor a_prob="0.991" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="74825" g_stop="74918" g_length="94"/>
          <reference_exon_boundary r_type="cDNA" r_start="76" r_stop="169" r_length="94" r_score="0.904"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="74919" i_stop="75010" i_length="92">
            <donor d_prob="0.958" d_score="0.92"/>
            <acceptor a_prob="0.997" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="75011" g_stop="75120" g_length="110"/>
          <reference_exon_boundary r_type="cDNA" r_start="170" r_stop="279" r_length="110" r_score="0.964"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0167M06.1" gen_strand="+" ref_id="SGN-E335625" ref_strand="+">
        <total_alignment_score>0.950</total_alignment_score>
        <cumulative_length_of_scored_exons>279</cumulative_length_of_scored_exons>
        <coverage percentage="0.946" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0167M06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E335625" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="73985" e_stop="74059"/>
          <exon e_start="74825" e_stop="74918"/>
          <exon e_start="75011" e_stop="75120"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTGACCCATCGCTTCTCTTCATCGCTGTGTTGAAGTTTTGGTTTTTGAGTTTTGAGATTTGCTGTTCGAAGATGGTAAGCGCTAACTTCAACTCATCAAAATCAATTGATCGCAATACTCTTTCGAATCAAATCTGGAAATCAAACAATGTAGAATTTTTTGATGTTAATTTTTCTTTGTTTACGCCGTTTTCAGCTTTATTTGATCTATATTTCCTTTTTGAGATTATGGGTTTCTGTAGAGTATAAATTCATGTTAGATTCTTTGTGTTCTTGAGTTGTTATGTATGTATCCCGAATCTCACTATATTGAATTGTGGAAATTAGTTAATACCAGTTTAAAATGGTGCTTATCGATTGAATTAACTAATTGGGGGTTGAGGTGATGGAAAACTTTCCCACTTAGCATTATACTCGAGTGCTGATGAATTTGATGTGTAGGTTAGAAAATTTGTTGAATCTGATGTTTTTACTTCATCCTTTAACTGGATAAAGGAGGAGGATTACATGGGTTGGGTTGATAGCCAGCGTAGAAATAAGCGAAATTACAGGAATCTTCTAAGTCTACACACTGGTTTCATCCTTGCTTTCTCTCCTGAGCACACACTCAAGCTACCCAACTACTGTATTTCTTCCTCCTTTATTCAGGTGGCACTGGTGAAGCATGCTCACATTGTTTATGTTAAGTAATCACATTGTGGAGTTCAATGTGCTTCCTATTTGTGGATACAAAATTATATGGCATTTTGCTTATTTTTGGGAAGTTTGAAAGAAGTGGCTTTGTCCATCTTTTTGGTAGAACATAAGTTGACAATTACTGATCTGAATTGGATTTGTCAGGTGCGATTACAGCCAGACCCATTCCTCAATGAACTGACGAGTATGTTTGAGCGAACTACTGAGCATGGTTCCGTTTGGGTTACGCTTAAACACTGTGAGTTTGCCTCTTCGTTGGTTTTCCTGTGTTTTGTGCTTTGTATTCTCTTTATGAGTAATACTGATTGAGCAATCTTGTCCTTTGTATAGCTTCTGATAAATCTAAAGCCCAACGGAATAAGATGAAGACAGCTGGTGAAACTCTTGAATTTAAGTGCCTCATCCGAGCAACTGATGGGAAAAAGAATATTTCCACAATG</genome_strand>
        <mrna_strand>TTTGACCCATCGCTTCTCTTCATCGCTGTGTGGAAGTTTTGGTTTTTGAGTTTTGAGATTTGCTGTTCGAAGATG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCGATAACATCCATACCCATTCCTCAGTGAACTGACCAGTATGTTTGAGCGAACTACTGACCATGGTTGCGATCGGGTTACGCTTAAACACT............................................................................................CTTCTGATGAATCTAAAGCCCAACGGAATAAGATGAATACAGCTGGTGAAACTCTTGAATTTAAGTGCCTTATCCGAGCAACTGATGGGAAAAAGAATATTTCCGCAATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E723581" ref_strand="+" ref_description="SGN-E723581 [FC20DG10]">
      <seq>gcttctcttcatcgctctgttgaagttttggtttttgagttttgagatttgctgttcgaagatggtgcgattacagccagacccattcctcaatgaactgacgagtatgtttgagcgaactactgagcatggttccgtttgggttacgcttaaacactcttctgataaatctaaagcccaacggaataagatgaagacagctggtgaaactcttgaatttaagtgcctcatccgagcaactgatgggaaaaagaatatttccacaatggttggagcaaaagatcaccagcgtttccaagcatcttatgcaattttgctgaaggcccggttgactgcactaaagaagagggagaggaaggacaagaggaaggctactgattctgacaaaaagatggatatttcgaaaaagaaatctgctgctgctaaagcctctacatgaaactttagtcctttggtttattcccccattttgtttctaggatagagttgtaggatttgaaccccatccatttggggcgacaagtctgaaacttcattacaactccactgcatagaatgaagaaaggaggtgtttttactcaatttgattattcacatctaaattagtcaaactttttaaagagcttgttgggttatggaacagttgaaggaattttgtcataatcttgaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0167M06.1" temp_strand="+" temp_description="C06HBa0167M06.1  AC211057.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0167M06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="73696" stop="83189"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="73996" g_stop="74059" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="64" r_length="64" r_score="0.984"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="74060" i_stop="74824" i_length="765">
            <donor d_prob="0.726" d_score="0.98"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="74825" g_stop="74918" g_length="94"/>
          <reference_exon_boundary r_type="cDNA" r_start="65" r_stop="158" r_length="94" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="74919" i_stop="75010" i_length="92">
            <donor d_prob="0.958" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="75011" g_stop="75120" g_length="110"/>
          <reference_exon_boundary r_type="cDNA" r_start="159" r_stop="268" r_length="110" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="75121" i_stop="82488" i_length="7368">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="82489" g_stop="82888" g_length="400"/>
          <reference_exon_boundary r_type="cDNA" r_start="269" r_stop="668" r_length="400" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="676" polyA_stop="726"/>
      <MATCH_line gen_id="C06HBa0167M06.1" gen_strand="+" ref_id="SGN-E723581" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>668</cumulative_length_of_scored_exons>
        <coverage percentage="0.920" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0167M06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E723581" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="73996" e_stop="74059"/>
          <exon e_start="74825" e_stop="74918"/>
          <exon e_start="75011" e_stop="75120"/>
          <exon e_start="82489" e_stop="82888"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTTCTCTTCATCGCTGTGTTGAAGTTTTGGTTTTTGAGTTTTGAGATTTGCTGTTCGAAGATGGTAAGCGCTAACTTCAACTCATCAAAATCAATTGATCGCAATACTCTTTCGAATCAAATCTGGAAATCAAACAATGTAGAATTTTTTGATGTTAATTTTTCTTTGTTTACGCCGTTTTCAGCTTTATTTGATCTATATTTCCTTTTTGAGATTATGGGTTTCTGTAGAGTATAAATTCATGTTAGATTCTTTGTGTTCTTGAGTTGTTATGTATGTATCCCGAATCTCACTATATTGAATTGTGGAAATTAGTTAATACCAGTTTAAAATGGTGCTTATCGATTGAATTAACTAATTGGGGGTTGAGGTGATGGAAAACTTTCCCACTTAGCATTATACTCGAGTGCTGATGAATTTGATGTGTAGGTTAGAAAATTTGTTGAATCTGATGTTTTTACTTCATCCTTTAACTGGATAAAGGAGGAGGATTACATGGGTTGGGTTGATAGCCAGCGTAGAAATAAGCGAAATTACAGGAATCTTCTAAGTCTACACACTGGTTTCATCCTTGCTTTCTCTCCTGAGCACACACTCAAGCTACCCAACTACTGTATTTCTTCCTCCTTTATTCAGGTGGCACTGGTGAAGCATGCTCACATTGTTTATGTTAAGTAATCACATTGTGGAGTTCAATGTGCTTCCTATTTGTGGATACAAAATTATATGGCATTTTGCTTATTTTTGGGAAGTTTGAAAGAAGTGGCTTTGTCCATCTTTTTGGTAGAACATAAGTTGACAATTACTGATCTGAATTGGATTTGTCAGGTGCGATTACAGCCAGACCCATTCCTCAATGAACTGACGAGTATGTTTGAGCGAACTACTGAGCATGGTTCCGTTTGGGTTACGCTTAAACACTGTGAGTTTGCCTCTTCGTTGGTTTTCCTGTGTTTTGTGCTTTGTATTCTCTTTATGAGTAATACTGATTGAGCAATCTTGTCCTTTGTATAGCTTCTGATAAATCTAAAGCCCAACGGAATAAGATGAAGACAGCTGGTGAAACTCTTGAATTTAAGTGCCTCATCCGAGCAACTGATGGGAAAAAGAATATTTCCACAATGGTAATTATCACAATAGAAAGTCTCTTACCTTTTTCCATCACCTTCTTTTTGCAAGTCTTGTCGTTTTCCCCATTTTTTTGCTTTGTTGGGCACTATGTTCTCTGGAACATTGAGGGTGTTAGTTTGTTGTATGAATTATTTTTTAGCATAAGTTTAAATGTGCAAATATAGATAATTCTAGGTCCTGGCCTGTATGTTTGAGATTGAGAGCATCAAATTCAAAAAAAGGATGGTAGCCTTGTGGTGCATAGAGAATGGGAGTCGTGGTCCTTGTTTACTTGATTGATAACTAATAGGTATCGTACATGCTTGTAATACAATATTAGAGCACATAAAGGGACAATTTCTCATAAAAGGCAAACAAATTATGGATGCAACTCTTTTAGTCAGTGAACCTGTGGATTCTAGACTCGAAGGTGAAGATCCAGGGATCATGTGAAACCTAGCTATAGAGAACCCATTATGATCATGTCAACTGGGAGTTACTTCTCAACCTTCTTTAAAAAATGGGTTTTGGTGGAAGATGGTTAAAGTGGATGGTTTTTGTATCAATACTGTCCTGAATTCTAGTCATAGGAGAAATTGCTGGAATTTTCCCTCAGAGAAAGAGGACTCGGGGAGACCCCCCTCTCTTTGCCTTTTCATATTAGCTATGGAAGGTTTCAGTAGTATGATGAGAGGTACTATTCAGAACAGTGGATAAAAGGTTTCAGGATAGGCAATCAAGCAGGGGAAGAGATGTAGATTTCCTTTCATTATTGCTGATGATATAGTTGTTTTCTAAGATGCTAAAGCAGATCAGATCATGTACATCAGAATGATTTTGGTGATCTTTGGGCAATTTTTGGTCCATTTGTAAAATTGGAGGAAAGGTAGTAGTTTCCCTGTCAAAGAAGTTCCACAAATTCAATGCCTGTCCATGTTATAAGTTTCGATGATTTAACAAACTATGACATCTAGTTGGGGACCTGATCCCATGAGGGACTGAGAGTTTCAGGCAATGTGCAAAGGACAGTTGTAAAGCTGCAACTGCTGCCACAATTGCAGTGGTTGGTGCACCTTTTCAGAGGAATAGTACTCAGCCAATGGCGTTGCACTAGGTAGTTTGTCCATCTTATAATAGTCATCTTGTCAAGGGACGTTTCCTAATTTTTGAGTTGAAGATTTCCATACGGCAAAATCCACTCTCAAAAAGAAATATTCTCATATGCATCAAGAGATCTGATCGAGTGATCTACTGTTCCCTTTAGTTGTTATTTTAGTTTATCGTCTCGTGTTTATACAGTGTAAGATCTGTTCATATGTTATAAAGGAATCAGATCATTTCAGTTGTAATCGTTGTTAAAAGTTTGAGTTGTAGCTAGAGTTAGCTATGTCGTGTTCTTGAAGTCTACATTAACTTAGCTTGTTGGCGTAGTAGGCAATAGAGGTATTACTTTGTTTATGAGTAACAAAGCTGTTACGAAAGGAGAAGGGATTAAGAGTTCATTTCCTAGGTTGCAAGAGTTTGTAATCGGGATCTTAACTCTTTGAAGTAATGGAATTGGCGAAATCCTGTGAGACAGGTTGTGATTTTCTCCTTCCTTAAGCAAGGGGGTTAACACGTAAACATTTTGTGTTCTTTATTTTAAGTTTTTCTTTCTGCACTGTTCTTACTATGTGAACGGACTTGGTCCATTGACTTGTGGTGGACGCATGTAAGTCATCAGTCCAACATCTTGAGTTGTAAAATTGAGAATTTCCCGACCAACTTACTTGGGGATGCCCCTTGGAAACAATCATAAGGAGCTAGAAGTTTGGGATGAGATTATTGAAAAAATTAGTAACCAAACTCAAAATGTGTTGAGCGCTCGACTTGCTTTATGTGCGCTTCGGTGTCGTCACCAGTGTTCTAAGACATATTTTTCCTTGCCAATGTGTCTCTGCCGAAGAGGTGACACTAAACAATTGATATTTCACTTAATCACATTTTTTTTGAAAAGGTACTTTATCATTATTTTTTTCGATTTCTTCAGTCATATATTTGTTATTTGTGTTTATAATTATTCGTCTTGGACTCAGCATATATATTTGTAATTTTTTCTCCCTTTGTGCCTTTTTTCATTAAAGCCCATTCTTTGTTTGCACATAAAGGTCCAATGGGCCTTAGAGTTTTTTTGCGCTTTTCGCGTTTGATAACACTTGAAAAACTAGCCAATTGGAAAGCCCGATGTTTATCTCTTGGAGGAAGTAGTACTCTTATGAACTCAGTATTGGACTCATTGCCAACACATGTCATGTCCTTATTTCTAATGCCTTCAGGTGGAGGATACCATACAAGTTGAGGACTTTCTATGTTAGGTAATAAGGAGGGCAGAGGTATTCACTAAGTGAAATGCCAAACTGCTCAGCTTATGGTTGACTTGGTATTAGGAATCTGGGGCTTCAAAACAGATGCTTATTGACAAAATGGAGGTTTGTTGGTGAGGATCATGCACTCTGGAAGGAAGTAACTATAAAAATATGGGCAGAGTAACTATTTGTGTTCTAATATGGTCTATGTTGGCTGGGAATATAGACTGTAGTGTGTGGAATGACACCTAGATCCTTTTTCCGAGAGATAAATGGATTGGACTCGAGCCTTTAATGAGCTCATTTTCGGAACTGTTCTCATTTTGTAGCAACTCTGAAGCATCAATAGTTGACACTCTGGGTGTGTTTGTGTCACGACCCAAACCGGGTTGCGACTGGCACCCACACTTACCCTCCTATGTGAGCGAACCAACCAATCTAAACCTTAACATTTCAATGTAATAACAGTAGAAAATAATGCGGAAGACTTAACTCATTAATAAAATCAATTCAATAACTATCAATATTCAACATCTATTATTCCCAAAACCTGGAAGTCATCATCACAAGAACATCTACGATCAAATGACTAAACTAAGAGTATTCTAAAAGCTAAAAATACATAAGAAGCTAGTCCATGCCGGAAGTTCAAGGCATCAAGACTTGAAGAAGAAGATCCAGTCCAAGCTAGAAGCATTAGCTCACCCTGAATTTCCGATGTAGTAAGACTGGCTTGAATTACTGTTGAGTTGAAGACGATGGCACGTTTGCTGCACTCCACAAATAAACAAGAAGAAAACATAAAAGTAGGGGTCAGTACAAAACACGGGTACTGAGTAGATATCATCGGCCAACTCAAAATAGGGAACAGTATATATCAATATTATCGTAAATCAACTATAAAACTCAACATGTAGCCACAACAAGTATTATAATCATCAATAAGTACCATCAAGTTCATCCATGAGGGCTCAAGCCTCAACACCATACTCATTTGGGAATTATGTTCGTTAGATTGAGTATATTAACATCTTTCAAGATTCATTATCTTTAATTCTCTTGTGTCGGTACGTGACACTCCGATCCCTCATATTCATTATTCCTCTTGTGTCGGTACGTGACACTCTGATCCCCTATATCTACGTGTCGGTTCGTGACACCCGATCCCCTACATCATTCTGTAAATCATCAGGCCTTCTCTATACCAAGGTATCATCAATCCTATTACTTTAATTCATCAAGCCTTCTTCTATACCAAGGCATCATCATTAATAATGTATATTAAAGTTTCCTTTCAAGATTTGGGATTCAATATTTTCATCATGCTTATCTTATCACAATCACATAATCATATTCACGCAAACATACAATTAAGCTTATAGTAGGGTTTACAATACTACCAATACATATCATTCTCTATTAAGAGTTTACTATGAAAGCATGAAAACCATAACCTACCTCCACCGAAGAGTTGAATCAAGCAAGAATTTTCCCAAAGCTTTGTTTCTCCCTTCTCGTTCGATTTTCTCTCTCTCTCTTGTTCTTTCTATTTTCTTTATTCAAACCCTCTTTCTTTTACCCTAATTAGTATATAATTAAGAATAAAAGATGGCAATAATACCCCACTAATTAACTTAGGGTTACCTCTTTTAACCCCTCAAGAATTTGAGTTATTAATATAACCCCACGAACTTTATAATTAAGGCAAGAATAGTCAAAAACGTCCCTTAAAACTTAACCAGAAATCCGACTCTGCCTGGGATTTGCGCAACCTGTGACGGGCCGTCGTGCCTGCGACGGTCCGTCCTGCAGGTCGTCGCAGAGTTCAGAGACCCAAATTTCCACCAAGGGTCTGTGACGGTCCGTCACACCTGTGACGGTCCGTCCTGCCATTCCGTCACAAAGTTCAGAGAGTCGATTTTTAGTACCCAATTTCAGATTTTCTAAGTGTTTTGAAACGAGACCCTGCGACGGTCCCTCGTGCCCTTGACGGTCCGTCGTGGGGTCCGTCGCTTCTGCCAGTTTTTCCAGAATTGAAGTCTGTTGCTCAAAACGACTAAACGGGTCGTTACAGTTTGGTATGGAGGAAAATGTTTTCCATGGAAAATGTTTTCCTAGAAAATGTTTTCCTGGAAAACAAGTAAATTTTGGACTTATTTTCTCATGTTTGGTTGGTGAGTAGAAAATATTTTCTGGATATGATTTTTAGTGTTTGATTTATGAATGAAAAATGTTTTTGAGAGACATTTTTTATTTTTACTAGAGTAAAAAATAATTTATGATATTGAAAATATTTTTCAAAATCAAAATTATTATTTTTTTGGGTGGTGGTGGGGGTGGGGTGGGGGCAGGGCGGGGGGAGGGGGAGGGGATAGGAGTGAAAAAATAAAAATTTGAATTTGATAGTATTTTTAAAAAACAAAATTAATTTTTTTGGGGATTGGGGTGGGTGGGGGCTGGTAGGGGGGCTGGCCGGGAGTGGGGGGGAGGGGTAGGAGTTAAAAAATAAAAAATTTGAAGTTGAAAATATTTTTAAAAAGCAAAATTAATTTTTTGAGGAGGGGTTGGGGTTGGGGTTGGGGGGGGCTGGCCGGGGGTTAGGGTCAAGGATCTGGTGAAAAAATAAAATTTTGAAATTGAAAATATTTATTTAAATTGATGATTTTCCCAAAAAAAAGTAATTTGAAATTGGAGGTGAGTTATGGAAAATGTTTTCCTTAATTTTTGAAGGGAAGTCATTTTCCTTAATTTTGAGGAAAATGAGTTGATTTGGAAATCATTTTCCGAAACTTTTGTCCCAACCAAACATGTGGAAATTGGAAAACATTTTCCAGAAAATGTTTTCCTTCATACCAAACACACTCTCTGTCCCCTCAAGGTGGAATCTCACATTCAGAAGGCACTTGAATGATTGAGAAGTGGGTAGATTTGTTGAGTTATTACAAGTGCTTAGTGGTTTCTTAGGTTTATCTACAGGATCAGACACAATGAGGTGGGAACATGACAGTGATGACTAGTTCTTATTAAGAAGACTCTAGAGAAATGAAGTGGTGGAGCAACCAGGAAGGAGGGGACATACCAGGTCCTTGGAAACAGATTTGGAAGTGCAGTGTCCCAAACAAGGTGCACTTGGTTGGTGACCTGAAGAGCATGTCTCACTGATGAAAAATTGGAAAGGAGGGGCTTTCAGATGGTATCCAGATGTTTTGTTTTTGGGCTAGGAGAATGAAGAAACTAATAATCATCTTTTCTTCATTGGAAGATTGTATCACAGATCTGGTCTGTGTTTCCAAGTATATCTCGAGCAAATTGGGTAACGCCTGAACACATTGCTGACCTACTTAGCTGATGCATAAGGAGTGGAGGGAGGGAACAGAGTCAGAAGGGACGGTAAGATAATACCATATTGCATATAGTGGTCAGTATGGAGAGAAGAAACAACAGATGCTTTGAGGATATCTCTAACCCAATCTAGATAATCAAAGAAAATTGTATGAATATTTTGTATTTTTGATGTAAAGAAAGGGTTTAGAAATAGCAGAGCAGTTAGCAGATATTTTAGGATGTTTGTACATTTCTGAATTTTGCTCACCTGCACATGCAAATACTCTTTGATTTGTTACTTCTTAAAATTGGGAAATTGACAAGGTTTTCCACATGGTACAACACACGGCATGGAGTTTGGGCTGAAACAGCCCGTCATGTATCTAAGAATGTGAGAGCCGCTTTAATATAGAACTTTGGTTGGGTATGTCCGCTAGCTAGCCCTTTCAGTATTTGCGAGTTGCACACTTGTTCTGAATATAGCTCACCTGCACATCCATATACTCCTTTGATTTGTTACTTCTTGAAATTGAGAAATTGACAAGGTTTTCTACATGGTACACATGGCATGAAGTTTGGGCTGACACGGCCCATCACGTGTCTTTAAGAATGTGAACTTCCCTTTAATATAGAACTTTGTCTGGTATGTCTGTTAGCTAGCCCTTTCAGCATTTGCGAGTTGCACAGTTTTGTTCTGAATTCTGCTCACCTGCACATGCAAATATGCTTTGATTAGTTACTTCTTGAAATTGAGAAATTGACAAGGTTTTCCACATGATACACATGACATGAAGTTTTTTAGCTTGTCACTTGTCTAAGAATGTGAATGTGTCTCTTTAATATAGAACTTTGTCTTGTGTATCTGCTAGCTATCCCTTTCAACATTTGTGAGTTGCACACTTCTGTTCTGAATTTTGCTCACCTGCACATGCAAATACTCTTTGATTTGTTACTTCTTGAAATTGAGAAATTGACAAGATTTTTCACATGGTACACATGGCACTAATTTTGGGCTAAAACATCTGGTCATGTTACAAGAATGTGAAATGTCGCTTTAATATAGAACTTTGTCTGGTATGTCTGCTAGCTAGCCCTTTCAGCATTTGCATGTTGCACACTTCTGTTCTAAATTTCGCTCACCTGCACATGCAAATACTGGTTGATTTGTTACTTCTTGAAATTTAGAAATTTACAAGGTTTTCACATGGTACATATTTCATGAAGTATGGGCTGATACAGCCCGTCATGTGTCTAAGAATGTGAACGTCCCTTTAGTATAGAACTTTATCTGGTATGTCTGCTAGTTAGCCCTCCCCCATTTTCCTTCTTGAATGCCTCTCCTCATCCTAAAATGGAGACAAGAACACCAACTTGAATTTTCTTTACTTTAGTAGTCTTTTTTTTTCTTCATCTTGTTTGTGTTCATCTCTTGCTTGTTGCTCTTTTTGATAAGGTAATGTTTTAATTAATGATTGGAGAAATCCCATATACAAGCCATACACCAAAAAATAAAGAATGTAAACCAAAATATTGTTCTCTACGAAAGGAAAACCAATCATCTATAAAACAGGCACCTTATGGGTGGTGTCATCTTATTTGTATTCACGTCTTTGCTTGTTGCTTATGTAGTTTATACAATTGTTGTTTATGTTTTGATGCATCATTTCACTTCTTGTGGCTCTAATGATGCACTTGATTATATTGAACTAACAGGTTGGAGCAAAAGATCACCAGCGTTTCCAAGCATCTTATGCAATTTTGCTGAAGGCCCGGTTGACTGCACTAAAGAAGAGGGAGAGGAAGGACAAGAGGAAGGCTACTGATTCTGACAAAAAGATGGATATTTCGAAAAAGAAATCTGCTGCTGCTAAAGCCTCTACATGAAACTTTAGTCCTTTGGTTTATTCCCCCATTTTGTTTCTAGGATAGAGTTGTAGGATTTGAACCCCATCCATTTGGGGCGACAAGTCTGAAACTTCATTACAACTCCACTGCATAGAATGAAGAAAGGAGGTGTTTTTACTCAATTTGATTATTCACATCTAAATTAGTCAAACTTTTTAAAGAGCTTGTTGGGTTATGGAACAGTTGAAGGAATTTTGTCATAATCTTG</genome_strand>
        <mrna_strand>GCTTCTCTTCATCGCTCTGTTGAAGTTTTGGTTTTTGAGTTTTGAGATTTGCTGTTCGAAGATG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCGATTACAGCCAGACCCATTCCTCAATGAACTGACGAGTATGTTTGAGCGAACTACTGAGCATGGTTCCGTTTGGGTTACGCTTAAACACT............................................................................................CTTCTGATAAATCTAAAGCCCAACGGAATAAGATGAAGACAGCTGGTGAAACTCTTGAATTTAAGTGCCTCATCCGAGCAACTGATGGGAAAAAGAATATTTCCACAATG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGGAGCAAAAGATCACCAGCGTTTCCAAGCATCTTATGCAATTTTGCTGAAGGCCCGGTTGACTGCACTAAAGAAGAGGGAGAGGAAGGACAAGAGGAAGGCTACTGATTCTGACAAAAAGATGGATATTTCGAAAAAGAAATCTGCTGCTGCTAAAGCCTCTACATGAAACTTTAGTCCTTTGGTTTATTCCCCCATTTTGTTTCTAGGATAGAGTTGTAGGATTTGAACCCCATCCATTTGGGGCGACAAGTCTGAAACTTCATTACAACTCCACTGCATAGAATGAAGAAAGGAGGTGTTTTTACTCAATTTGATTATTCACATCTAAATTAGTCAAACTTTTTAAAGAGCTTGTTGGGTTATGGAACAGTTGAAGGAATTTTGTCATAATCTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E704851" ref_strand="+" ref_description="SGN-E704851 [FA25BG10]">
      <seq>cttctcttcatcgctgtgttgaagttttggtttttgagttttgagatttgctgttcgaagatggtgcgattacagccagacccattcctcaatgaactgacgagtatgtttgagcgaactactgagcatggttccgtttgggttacgcttaaacactcttctgataaatctaaagcccaacggaataagatgaagacagctggtgaaactcttgaatttaagtgcctcatccgagcaactgatgggaaaaagaatatttccacaatggttggagcaaaagatcaccagcgtttccaagcatcttatgcaattttgctgaaggcccggttgactgcactaaagaagagggagaggaaggacaagaggaaggctactgattctgacaaaaagatggatatttcgaaaaagaaatctgctgctgctaaagcctctacatgaaactttagtcctttggtttattcccccattttgtttctaggatagagttgtaggatttgaaccccatccatttggggcgacaagtctgaaacttcattacaactccactgcatagaatgaagaaaggaggtgtttttactcaatttgattattcacatctaaattagtcaaactttttaaagagcttgttgggttatggaacagttgaaggaattttgtcataatcctgatcttttaattccttgaacaacagctttggcaattgaaagtagatgggaccaaattaaaagtagtatgcctacatacttgaatgtcatgtcaactgcatatgtccatactttttgcgcgtgggaacttaaaatgacatttttttgcttctttttgttcaaccagttctttttccactgttccaaaaccat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0167M06.1" temp_strand="+" temp_description="C06HBa0167M06.1  AC211057.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0167M06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="73697" stop="83378"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="73997" g_stop="74059" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="63" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="74060" i_stop="74824" i_length="765">
            <donor d_prob="0.726" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="74825" g_stop="74918" g_length="94"/>
          <reference_exon_boundary r_type="cDNA" r_start="64" r_stop="157" r_length="94" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="74919" i_stop="75010" i_length="92">
            <donor d_prob="0.958" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="75011" g_stop="75120" g_length="110"/>
          <reference_exon_boundary r_type="cDNA" r_start="158" r_stop="267" r_length="110" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="75121" i_stop="82488" i_length="7368">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="82489" g_stop="83078" g_length="590"/>
          <reference_exon_boundary r_type="cDNA" r_start="268" r_stop="857" r_length="590" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0167M06.1" gen_strand="+" ref_id="SGN-E704851" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>857</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0167M06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E704851" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="73997" e_stop="74059"/>
          <exon e_start="74825" e_stop="74918"/>
          <exon e_start="75011" e_stop="75120"/>
          <exon e_start="82489" e_stop="83078"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTCTCTTCATCGCTGTGTTGAAGTTTTGGTTTTTGAGTTTTGAGATTTGCTGTTCGAAGATGGTAAGCGCTAACTTCAACTCATCAAAATCAATTGATCGCAATACTCTTTCGAATCAAATCTGGAAATCAAACAATGTAGAATTTTTTGATGTTAATTTTTCTTTGTTTACGCCGTTTTCAGCTTTATTTGATCTATATTTCCTTTTTGAGATTATGGGTTTCTGTAGAGTATAAATTCATGTTAGATTCTTTGTGTTCTTGAGTTGTTATGTATGTATCCCGAATCTCACTATATTGAATTGTGGAAATTAGTTAATACCAGTTTAAAATGGTGCTTATCGATTGAATTAACTAATTGGGGGTTGAGGTGATGGAAAACTTTCCCACTTAGCATTATACTCGAGTGCTGATGAATTTGATGTGTAGGTTAGAAAATTTGTTGAATCTGATGTTTTTACTTCATCCTTTAACTGGATAAAGGAGGAGGATTACATGGGTTGGGTTGATAGCCAGCGTAGAAATAAGCGAAATTACAGGAATCTTCTAAGTCTACACACTGGTTTCATCCTTGCTTTCTCTCCTGAGCACACACTCAAGCTACCCAACTACTGTATTTCTTCCTCCTTTATTCAGGTGGCACTGGTGAAGCATGCTCACATTGTTTATGTTAAGTAATCACATTGTGGAGTTCAATGTGCTTCCTATTTGTGGATACAAAATTATATGGCATTTTGCTTATTTTTGGGAAGTTTGAAAGAAGTGGCTTTGTCCATCTTTTTGGTAGAACATAAGTTGACAATTACTGATCTGAATTGGATTTGTCAGGTGCGATTACAGCCAGACCCATTCCTCAATGAACTGACGAGTATGTTTGAGCGAACTACTGAGCATGGTTCCGTTTGGGTTACGCTTAAACACTGTGAGTTTGCCTCTTCGTTGGTTTTCCTGTGTTTTGTGCTTTGTATTCTCTTTATGAGTAATACTGATTGAGCAATCTTGTCCTTTGTATAGCTTCTGATAAATCTAAAGCCCAACGGAATAAGATGAAGACAGCTGGTGAAACTCTTGAATTTAAGTGCCTCATCCGAGCAACTGATGGGAAAAAGAATATTTCCACAATGGTAATTATCACAATAGAAAGTCTCTTACCTTTTTCCATCACCTTCTTTTTGCAAGTCTTGTCGTTTTCCCCATTTTTTTGCTTTGTTGGGCACTATGTTCTCTGGAACATTGAGGGTGTTAGTTTGTTGTATGAATTATTTTTTAGCATAAGTTTAAATGTGCAAATATAGATAATTCTAGGTCCTGGCCTGTATGTTTGAGATTGAGAGCATCAAATTCAAAAAAAGGATGGTAGCCTTGTGGTGCATAGAGAATGGGAGTCGTGGTCCTTGTTTACTTGATTGATAACTAATAGGTATCGTACATGCTTGTAATACAATATTAGAGCACATAAAGGGACAATTTCTCATAAAAGGCAAACAAATTATGGATGCAACTCTTTTAGTCAGTGAACCTGTGGATTCTAGACTCGAAGGTGAAGATCCAGGGATCATGTGAAACCTAGCTATAGAGAACCCATTATGATCATGTCAACTGGGAGTTACTTCTCAACCTTCTTTAAAAAATGGGTTTTGGTGGAAGATGGTTAAAGTGGATGGTTTTTGTATCAATACTGTCCTGAATTCTAGTCATAGGAGAAATTGCTGGAATTTTCCCTCAGAGAAAGAGGACTCGGGGAGACCCCCCTCTCTTTGCCTTTTCATATTAGCTATGGAAGGTTTCAGTAGTATGATGAGAGGTACTATTCAGAACAGTGGATAAAAGGTTTCAGGATAGGCAATCAAGCAGGGGAAGAGATGTAGATTTCCTTTCATTATTGCTGATGATATAGTTGTTTTCTAAGATGCTAAAGCAGATCAGATCATGTACATCAGAATGATTTTGGTGATCTTTGGGCAATTTTTGGTCCATTTGTAAAATTGGAGGAAAGGTAGTAGTTTCCCTGTCAAAGAAGTTCCACAAATTCAATGCCTGTCCATGTTATAAGTTTCGATGATTTAACAAACTATGACATCTAGTTGGGGACCTGATCCCATGAGGGACTGAGAGTTTCAGGCAATGTGCAAAGGACAGTTGTAAAGCTGCAACTGCTGCCACAATTGCAGTGGTTGGTGCACCTTTTCAGAGGAATAGTACTCAGCCAATGGCGTTGCACTAGGTAGTTTGTCCATCTTATAATAGTCATCTTGTCAAGGGACGTTTCCTAATTTTTGAGTTGAAGATTTCCATACGGCAAAATCCACTCTCAAAAAGAAATATTCTCATATGCATCAAGAGATCTGATCGAGTGATCTACTGTTCCCTTTAGTTGTTATTTTAGTTTATCGTCTCGTGTTTATACAGTGTAAGATCTGTTCATATGTTATAAAGGAATCAGATCATTTCAGTTGTAATCGTTGTTAAAAGTTTGAGTTGTAGCTAGAGTTAGCTATGTCGTGTTCTTGAAGTCTACATTAACTTAGCTTGTTGGCGTAGTAGGCAATAGAGGTATTACTTTGTTTATGAGTAACAAAGCTGTTACGAAAGGAGAAGGGATTAAGAGTTCATTTCCTAGGTTGCAAGAGTTTGTAATCGGGATCTTAACTCTTTGAAGTAATGGAATTGGCGAAATCCTGTGAGACAGGTTGTGATTTTCTCCTTCCTTAAGCAAGGGGGTTAACACGTAAACATTTTGTGTTCTTTATTTTAAGTTTTTCTTTCTGCACTGTTCTTACTATGTGAACGGACTTGGTCCATTGACTTGTGGTGGACGCATGTAAGTCATCAGTCCAACATCTTGAGTTGTAAAATTGAGAATTTCCCGACCAACTTACTTGGGGATGCCCCTTGGAAACAATCATAAGGAGCTAGAAGTTTGGGATGAGATTATTGAAAAAATTAGTAACCAAACTCAAAATGTGTTGAGCGCTCGACTTGCTTTATGTGCGCTTCGGTGTCGTCACCAGTGTTCTAAGACATATTTTTCCTTGCCAATGTGTCTCTGCCGAAGAGGTGACACTAAACAATTGATATTTCACTTAATCACATTTTTTTTGAAAAGGTACTTTATCATTATTTTTTTCGATTTCTTCAGTCATATATTTGTTATTTGTGTTTATAATTATTCGTCTTGGACTCAGCATATATATTTGTAATTTTTTCTCCCTTTGTGCCTTTTTTCATTAAAGCCCATTCTTTGTTTGCACATAAAGGTCCAATGGGCCTTAGAGTTTTTTTGCGCTTTTCGCGTTTGATAACACTTGAAAAACTAGCCAATTGGAAAGCCCGATGTTTATCTCTTGGAGGAAGTAGTACTCTTATGAACTCAGTATTGGACTCATTGCCAACACATGTCATGTCCTTATTTCTAATGCCTTCAGGTGGAGGATACCATACAAGTTGAGGACTTTCTATGTTAGGTAATAAGGAGGGCAGAGGTATTCACTAAGTGAAATGCCAAACTGCTCAGCTTATGGTTGACTTGGTATTAGGAATCTGGGGCTTCAAAACAGATGCTTATTGACAAAATGGAGGTTTGTTGGTGAGGATCATGCACTCTGGAAGGAAGTAACTATAAAAATATGGGCAGAGTAACTATTTGTGTTCTAATATGGTCTATGTTGGCTGGGAATATAGACTGTAGTGTGTGGAATGACACCTAGATCCTTTTTCCGAGAGATAAATGGATTGGACTCGAGCCTTTAATGAGCTCATTTTCGGAACTGTTCTCATTTTGTAGCAACTCTGAAGCATCAATAGTTGACACTCTGGGTGTGTTTGTGTCACGACCCAAACCGGGTTGCGACTGGCACCCACACTTACCCTCCTATGTGAGCGAACCAACCAATCTAAACCTTAACATTTCAATGTAATAACAGTAGAAAATAATGCGGAAGACTTAACTCATTAATAAAATCAATTCAATAACTATCAATATTCAACATCTATTATTCCCAAAACCTGGAAGTCATCATCACAAGAACATCTACGATCAAATGACTAAACTAAGAGTATTCTAAAAGCTAAAAATACATAAGAAGCTAGTCCATGCCGGAAGTTCAAGGCATCAAGACTTGAAGAAGAAGATCCAGTCCAAGCTAGAAGCATTAGCTCACCCTGAATTTCCGATGTAGTAAGACTGGCTTGAATTACTGTTGAGTTGAAGACGATGGCACGTTTGCTGCACTCCACAAATAAACAAGAAGAAAACATAAAAGTAGGGGTCAGTACAAAACACGGGTACTGAGTAGATATCATCGGCCAACTCAAAATAGGGAACAGTATATATCAATATTATCGTAAATCAACTATAAAACTCAACATGTAGCCACAACAAGTATTATAATCATCAATAAGTACCATCAAGTTCATCCATGAGGGCTCAAGCCTCAACACCATACTCATTTGGGAATTATGTTCGTTAGATTGAGTATATTAACATCTTTCAAGATTCATTATCTTTAATTCTCTTGTGTCGGTACGTGACACTCCGATCCCTCATATTCATTATTCCTCTTGTGTCGGTACGTGACACTCTGATCCCCTATATCTACGTGTCGGTTCGTGACACCCGATCCCCTACATCATTCTGTAAATCATCAGGCCTTCTCTATACCAAGGTATCATCAATCCTATTACTTTAATTCATCAAGCCTTCTTCTATACCAAGGCATCATCATTAATAATGTATATTAAAGTTTCCTTTCAAGATTTGGGATTCAATATTTTCATCATGCTTATCTTATCACAATCACATAATCATATTCACGCAAACATACAATTAAGCTTATAGTAGGGTTTACAATACTACCAATACATATCATTCTCTATTAAGAGTTTACTATGAAAGCATGAAAACCATAACCTACCTCCACCGAAGAGTTGAATCAAGCAAGAATTTTCCCAAAGCTTTGTTTCTCCCTTCTCGTTCGATTTTCTCTCTCTCTCTTGTTCTTTCTATTTTCTTTATTCAAACCCTCTTTCTTTTACCCTAATTAGTATATAATTAAGAATAAAAGATGGCAATAATACCCCACTAATTAACTTAGGGTTACCTCTTTTAACCCCTCAAGAATTTGAGTTATTAATATAACCCCACGAACTTTATAATTAAGGCAAGAATAGTCAAAAACGTCCCTTAAAACTTAACCAGAAATCCGACTCTGCCTGGGATTTGCGCAACCTGTGACGGGCCGTCGTGCCTGCGACGGTCCGTCCTGCAGGTCGTCGCAGAGTTCAGAGACCCAAATTTCCACCAAGGGTCTGTGACGGTCCGTCACACCTGTGACGGTCCGTCCTGCCATTCCGTCACAAAGTTCAGAGAGTCGATTTTTAGTACCCAATTTCAGATTTTCTAAGTGTTTTGAAACGAGACCCTGCGACGGTCCCTCGTGCCCTTGACGGTCCGTCGTGGGGTCCGTCGCTTCTGCCAGTTTTTCCAGAATTGAAGTCTGTTGCTCAAAACGACTAAACGGGTCGTTACAGTTTGGTATGGAGGAAAATGTTTTCCATGGAAAATGTTTTCCTAGAAAATGTTTTCCTGGAAAACAAGTAAATTTTGGACTTATTTTCTCATGTTTGGTTGGTGAGTAGAAAATATTTTCTGGATATGATTTTTAGTGTTTGATTTATGAATGAAAAATGTTTTTGAGAGACATTTTTTATTTTTACTAGAGTAAAAAATAATTTATGATATTGAAAATATTTTTCAAAATCAAAATTATTATTTTTTTGGGTGGTGGTGGGGGTGGGGTGGGGGCAGGGCGGGGGGAGGGGGAGGGGATAGGAGTGAAAAAATAAAAATTTGAATTTGATAGTATTTTTAAAAAACAAAATTAATTTTTTTGGGGATTGGGGTGGGTGGGGGCTGGTAGGGGGGCTGGCCGGGAGTGGGGGGGAGGGGTAGGAGTTAAAAAATAAAAAATTTGAAGTTGAAAATATTTTTAAAAAGCAAAATTAATTTTTTGAGGAGGGGTTGGGGTTGGGGTTGGGGGGGGCTGGCCGGGGGTTAGGGTCAAGGATCTGGTGAAAAAATAAAATTTTGAAATTGAAAATATTTATTTAAATTGATGATTTTCCCAAAAAAAAGTAATTTGAAATTGGAGGTGAGTTATGGAAAATGTTTTCCTTAATTTTTGAAGGGAAGTCATTTTCCTTAATTTTGAGGAAAATGAGTTGATTTGGAAATCATTTTCCGAAACTTTTGTCCCAACCAAACATGTGGAAATTGGAAAACATTTTCCAGAAAATGTTTTCCTTCATACCAAACACACTCTCTGTCCCCTCAAGGTGGAATCTCACATTCAGAAGGCACTTGAATGATTGAGAAGTGGGTAGATTTGTTGAGTTATTACAAGTGCTTAGTGGTTTCTTAGGTTTATCTACAGGATCAGACACAATGAGGTGGGAACATGACAGTGATGACTAGTTCTTATTAAGAAGACTCTAGAGAAATGAAGTGGTGGAGCAACCAGGAAGGAGGGGACATACCAGGTCCTTGGAAACAGATTTGGAAGTGCAGTGTCCCAAACAAGGTGCACTTGGTTGGTGACCTGAAGAGCATGTCTCACTGATGAAAAATTGGAAAGGAGGGGCTTTCAGATGGTATCCAGATGTTTTGTTTTTGGGCTAGGAGAATGAAGAAACTAATAATCATCTTTTCTTCATTGGAAGATTGTATCACAGATCTGGTCTGTGTTTCCAAGTATATCTCGAGCAAATTGGGTAACGCCTGAACACATTGCTGACCTACTTAGCTGATGCATAAGGAGTGGAGGGAGGGAACAGAGTCAGAAGGGACGGTAAGATAATACCATATTGCATATAGTGGTCAGTATGGAGAGAAGAAACAACAGATGCTTTGAGGATATCTCTAACCCAATCTAGATAATCAAAGAAAATTGTATGAATATTTTGTATTTTTGATGTAAAGAAAGGGTTTAGAAATAGCAGAGCAGTTAGCAGATATTTTAGGATGTTTGTACATTTCTGAATTTTGCTCACCTGCACATGCAAATACTCTTTGATTTGTTACTTCTTAAAATTGGGAAATTGACAAGGTTTTCCACATGGTACAACACACGGCATGGAGTTTGGGCTGAAACAGCCCGTCATGTATCTAAGAATGTGAGAGCCGCTTTAATATAGAACTTTGGTTGGGTATGTCCGCTAGCTAGCCCTTTCAGTATTTGCGAGTTGCACACTTGTTCTGAATATAGCTCACCTGCACATCCATATACTCCTTTGATTTGTTACTTCTTGAAATTGAGAAATTGACAAGGTTTTCTACATGGTACACATGGCATGAAGTTTGGGCTGACACGGCCCATCACGTGTCTTTAAGAATGTGAACTTCCCTTTAATATAGAACTTTGTCTGGTATGTCTGTTAGCTAGCCCTTTCAGCATTTGCGAGTTGCACAGTTTTGTTCTGAATTCTGCTCACCTGCACATGCAAATATGCTTTGATTAGTTACTTCTTGAAATTGAGAAATTGACAAGGTTTTCCACATGATACACATGACATGAAGTTTTTTAGCTTGTCACTTGTCTAAGAATGTGAATGTGTCTCTTTAATATAGAACTTTGTCTTGTGTATCTGCTAGCTATCCCTTTCAACATTTGTGAGTTGCACACTTCTGTTCTGAATTTTGCTCACCTGCACATGCAAATACTCTTTGATTTGTTACTTCTTGAAATTGAGAAATTGACAAGATTTTTCACATGGTACACATGGCACTAATTTTGGGCTAAAACATCTGGTCATGTTACAAGAATGTGAAATGTCGCTTTAATATAGAACTTTGTCTGGTATGTCTGCTAGCTAGCCCTTTCAGCATTTGCATGTTGCACACTTCTGTTCTAAATTTCGCTCACCTGCACATGCAAATACTGGTTGATTTGTTACTTCTTGAAATTTAGAAATTTACAAGGTTTTCACATGGTACATATTTCATGAAGTATGGGCTGATACAGCCCGTCATGTGTCTAAGAATGTGAACGTCCCTTTAGTATAGAACTTTATCTGGTATGTCTGCTAGTTAGCCCTCCCCCATTTTCCTTCTTGAATGCCTCTCCTCATCCTAAAATGGAGACAAGAACACCAACTTGAATTTTCTTTACTTTAGTAGTCTTTTTTTTTCTTCATCTTGTTTGTGTTCATCTCTTGCTTGTTGCTCTTTTTGATAAGGTAATGTTTTAATTAATGATTGGAGAAATCCCATATACAAGCCATACACCAAAAAATAAAGAATGTAAACCAAAATATTGTTCTCTACGAAAGGAAAACCAATCATCTATAAAACAGGCACCTTATGGGTGGTGTCATCTTATTTGTATTCACGTCTTTGCTTGTTGCTTATGTAGTTTATACAATTGTTGTTTATGTTTTGATGCATCATTTCACTTCTTGTGGCTCTAATGATGCACTTGATTATATTGAACTAACAGGTTGGAGCAAAAGATCACCAGCGTTTCCAAGCATCTTATGCAATTTTGCTGAAGGCCCGGTTGACTGCACTAAAGAAGAGGGAGAGGAAGGACAAGAGGAAGGCTACTGATTCTGACAAAAAGATGGATATTTCGAAAAAGAAATCTGCTGCTGCTAAAGCCTCTACATGAAACTTTAGTCCTTTGGTTTATTCCCCCATTTTGTTTCTAGGATAGAGTTGTAGGATTTGAACCCCATCCATTTGGGGCGACAAGTCTGAAACTTCATTACAACTCCACTGCATAGAATGAAGAAAGGAGGTGTTTTTACTCAATTTGATTATTCACATCTAAATTAGTCAAACTTTTTAAAGAGCTTGTTGGGTTATGGAACAGTTGAAGGAATTTTGTCATAATCTTGATCTTTTAATTCCTTGAACAACAGCTTTGGCAATTGAAAGTAGATGGGACCAAATTAAAAGTAGTATGCCTACATACTTGAATGTCATGTCAACTGCATATGTCCATACTTTTTGGTTGTGGGAACTTAAAATGACATTTTTTTGCTTCTTTTTGTTCAACCAGTTCTTTTTCCACTGTTCCAAAACCAT</genome_strand>
        <mrna_strand>CTTCTCTTCATCGCTGTGTTGAAGTTTTGGTTTTTGAGTTTTGAGATTTGCTGTTCGAAGATG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCGATTACAGCCAGACCCATTCCTCAATGAACTGACGAGTATGTTTGAGCGAACTACTGAGCATGGTTCCGTTTGGGTTACGCTTAAACACT............................................................................................CTTCTGATAAATCTAAAGCCCAACGGAATAAGATGAAGACAGCTGGTGAAACTCTTGAATTTAAGTGCCTCATCCGAGCAACTGATGGGAAAAAGAATATTTCCACAATG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGGAGCAAAAGATCACCAGCGTTTCCAAGCATCTTATGCAATTTTGCTGAAGGCCCGGTTGACTGCACTAAAGAAGAGGGAGAGGAAGGACAAGAGGAAGGCTACTGATTCTGACAAAAAGATGGATATTTCGAAAAAGAAATCTGCTGCTGCTAAAGCCTCTACATGAAACTTTAGTCCTTTGGTTTATTCCCCCATTTTGTTTCTAGGATAGAGTTGTAGGATTTGAACCCCATCCATTTGGGGCGACAAGTCTGAAACTTCATTACAACTCCACTGCATAGAATGAAGAAAGGAGGTGTTTTTACTCAATTTGATTATTCACATCTAAATTAGTCAAACTTTTTAAAGAGCTTGTTGGGTTATGGAACAGTTGAAGGAATTTTGTCATAATCCTGATCTTTTAATTCCTTGAACAACAGCTTTGGCAATTGAAAGTAGATGGGACCAAATTAAAAGTAGTATGCCTACATACTTGAATGTCATGTCAACTGCATATGTCCATACTTTTTGCGCGTGGGAACTTAAAATGACATTTTTTTGCTTCTTTTTGTTCAACCAGTTCTTTTTCCACTGTTCCAAAACCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E704742" ref_strand="+" ref_description="SGN-E704742 [FA25AE09]">
      <seq>ctcttcatcgctgtgttgaagttttggtttttgagttttgagatttgctgttcgaagatggtgcgattacagccagacccattcctcaatgaactgacgagtatgtttgagcgaactactgagcatggttccgtttgggttacgcttaaacactcttctgataaatctaaagcccaacggaataagatgaagacagctggtgaaactcttgaatttaagtgcctcatccgagcaactgatgggaaaaagaatatttccacaatggttggagcaaaagatcaccagcgtttccaagcatcttatgcaattttgctgaaggcccggttgactgcactaaagaagagggagaggaaggacaagaggaaggctactgattctgacaaaaagatggatatttcgaaaaagaaatctgctgctgctaaagcctctacatgaaactttagtcctttggtttattcccccattttgtttctaggatagagttgtaggatttgaaccccatccatttggggcgacaagtctgaaacttcattacaactccactgcatagaatgaagaaaggaggtgtttttactcaatttgattattcacatctaaattagtcaaactttttaaagagcttgttgggttatggaacagttgaaggaattttgtcataatcttgatcttttaattcctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0167M06.1" temp_strand="+" temp_description="C06HBa0167M06.1  AC211057.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0167M06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="73700" stop="83203"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="74000" g_stop="74059" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="60" r_length="60" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="74060" i_stop="74824" i_length="765">
            <donor d_prob="0.726" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="74825" g_stop="74918" g_length="94"/>
          <reference_exon_boundary r_type="cDNA" r_start="61" r_stop="154" r_length="94" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="74919" i_stop="75010" i_length="92">
            <donor d_prob="0.958" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="75011" g_stop="75120" g_length="110"/>
          <reference_exon_boundary r_type="cDNA" r_start="155" r_stop="264" r_length="110" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="75121" i_stop="82488" i_length="7368">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="82489" g_stop="82903" g_length="415"/>
          <reference_exon_boundary r_type="cDNA" r_start="265" r_stop="679" r_length="415" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0167M06.1" gen_strand="+" ref_id="SGN-E704742" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>679</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0167M06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E704742" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="74000" e_stop="74059"/>
          <exon e_start="74825" e_stop="74918"/>
          <exon e_start="75011" e_stop="75120"/>
          <exon e_start="82489" e_stop="82903"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCTTCATCGCTGTGTTGAAGTTTTGGTTTTTGAGTTTTGAGATTTGCTGTTCGAAGATGGTAAGCGCTAACTTCAACTCATCAAAATCAATTGATCGCAATACTCTTTCGAATCAAATCTGGAAATCAAACAATGTAGAATTTTTTGATGTTAATTTTTCTTTGTTTACGCCGTTTTCAGCTTTATTTGATCTATATTTCCTTTTTGAGATTATGGGTTTCTGTAGAGTATAAATTCATGTTAGATTCTTTGTGTTCTTGAGTTGTTATGTATGTATCCCGAATCTCACTATATTGAATTGTGGAAATTAGTTAATACCAGTTTAAAATGGTGCTTATCGATTGAATTAACTAATTGGGGGTTGAGGTGATGGAAAACTTTCCCACTTAGCATTATACTCGAGTGCTGATGAATTTGATGTGTAGGTTAGAAAATTTGTTGAATCTGATGTTTTTACTTCATCCTTTAACTGGATAAAGGAGGAGGATTACATGGGTTGGGTTGATAGCCAGCGTAGAAATAAGCGAAATTACAGGAATCTTCTAAGTCTACACACTGGTTTCATCCTTGCTTTCTCTCCTGAGCACACACTCAAGCTACCCAACTACTGTATTTCTTCCTCCTTTATTCAGGTGGCACTGGTGAAGCATGCTCACATTGTTTATGTTAAGTAATCACATTGTGGAGTTCAATGTGCTTCCTATTTGTGGATACAAAATTATATGGCATTTTGCTTATTTTTGGGAAGTTTGAAAGAAGTGGCTTTGTCCATCTTTTTGGTAGAACATAAGTTGACAATTACTGATCTGAATTGGATTTGTCAGGTGCGATTACAGCCAGACCCATTCCTCAATGAACTGACGAGTATGTTTGAGCGAACTACTGAGCATGGTTCCGTTTGGGTTACGCTTAAACACTGTGAGTTTGCCTCTTCGTTGGTTTTCCTGTGTTTTGTGCTTTGTATTCTCTTTATGAGTAATACTGATTGAGCAATCTTGTCCTTTGTATAGCTTCTGATAAATCTAAAGCCCAACGGAATAAGATGAAGACAGCTGGTGAAACTCTTGAATTTAAGTGCCTCATCCGAGCAACTGATGGGAAAAAGAATATTTCCACAATGGTAATTATCACAATAGAAAGTCTCTTACCTTTTTCCATCACCTTCTTTTTGCAAGTCTTGTCGTTTTCCCCATTTTTTTGCTTTGTTGGGCACTATGTTCTCTGGAACATTGAGGGTGTTAGTTTGTTGTATGAATTATTTTTTAGCATAAGTTTAAATGTGCAAATATAGATAATTCTAGGTCCTGGCCTGTATGTTTGAGATTGAGAGCATCAAATTCAAAAAAAGGATGGTAGCCTTGTGGTGCATAGAGAATGGGAGTCGTGGTCCTTGTTTACTTGATTGATAACTAATAGGTATCGTACATGCTTGTAATACAATATTAGAGCACATAAAGGGACAATTTCTCATAAAAGGCAAACAAATTATGGATGCAACTCTTTTAGTCAGTGAACCTGTGGATTCTAGACTCGAAGGTGAAGATCCAGGGATCATGTGAAACCTAGCTATAGAGAACCCATTATGATCATGTCAACTGGGAGTTACTTCTCAACCTTCTTTAAAAAATGGGTTTTGGTGGAAGATGGTTAAAGTGGATGGTTTTTGTATCAATACTGTCCTGAATTCTAGTCATAGGAGAAATTGCTGGAATTTTCCCTCAGAGAAAGAGGACTCGGGGAGACCCCCCTCTCTTTGCCTTTTCATATTAGCTATGGAAGGTTTCAGTAGTATGATGAGAGGTACTATTCAGAACAGTGGATAAAAGGTTTCAGGATAGGCAATCAAGCAGGGGAAGAGATGTAGATTTCCTTTCATTATTGCTGATGATATAGTTGTTTTCTAAGATGCTAAAGCAGATCAGATCATGTACATCAGAATGATTTTGGTGATCTTTGGGCAATTTTTGGTCCATTTGTAAAATTGGAGGAAAGGTAGTAGTTTCCCTGTCAAAGAAGTTCCACAAATTCAATGCCTGTCCATGTTATAAGTTTCGATGATTTAACAAACTATGACATCTAGTTGGGGACCTGATCCCATGAGGGACTGAGAGTTTCAGGCAATGTGCAAAGGACAGTTGTAAAGCTGCAACTGCTGCCACAATTGCAGTGGTTGGTGCACCTTTTCAGAGGAATAGTACTCAGCCAATGGCGTTGCACTAGGTAGTTTGTCCATCTTATAATAGTCATCTTGTCAAGGGACGTTTCCTAATTTTTGAGTTGAAGATTTCCATACGGCAAAATCCACTCTCAAAAAGAAATATTCTCATATGCATCAAGAGATCTGATCGAGTGATCTACTGTTCCCTTTAGTTGTTATTTTAGTTTATCGTCTCGTGTTTATACAGTGTAAGATCTGTTCATATGTTATAAAGGAATCAGATCATTTCAGTTGTAATCGTTGTTAAAAGTTTGAGTTGTAGCTAGAGTTAGCTATGTCGTGTTCTTGAAGTCTACATTAACTTAGCTTGTTGGCGTAGTAGGCAATAGAGGTATTACTTTGTTTATGAGTAACAAAGCTGTTACGAAAGGAGAAGGGATTAAGAGTTCATTTCCTAGGTTGCAAGAGTTTGTAATCGGGATCTTAACTCTTTGAAGTAATGGAATTGGCGAAATCCTGTGAGACAGGTTGTGATTTTCTCCTTCCTTAAGCAAGGGGGTTAACACGTAAACATTTTGTGTTCTTTATTTTAAGTTTTTCTTTCTGCACTGTTCTTACTATGTGAACGGACTTGGTCCATTGACTTGTGGTGGACGCATGTAAGTCATCAGTCCAACATCTTGAGTTGTAAAATTGAGAATTTCCCGACCAACTTACTTGGGGATGCCCCTTGGAAACAATCATAAGGAGCTAGAAGTTTGGGATGAGATTATTGAAAAAATTAGTAACCAAACTCAAAATGTGTTGAGCGCTCGACTTGCTTTATGTGCGCTTCGGTGTCGTCACCAGTGTTCTAAGACATATTTTTCCTTGCCAATGTGTCTCTGCCGAAGAGGTGACACTAAACAATTGATATTTCACTTAATCACATTTTTTTTGAAAAGGTACTTTATCATTATTTTTTTCGATTTCTTCAGTCATATATTTGTTATTTGTGTTTATAATTATTCGTCTTGGACTCAGCATATATATTTGTAATTTTTTCTCCCTTTGTGCCTTTTTTCATTAAAGCCCATTCTTTGTTTGCACATAAAGGTCCAATGGGCCTTAGAGTTTTTTTGCGCTTTTCGCGTTTGATAACACTTGAAAAACTAGCCAATTGGAAAGCCCGATGTTTATCTCTTGGAGGAAGTAGTACTCTTATGAACTCAGTATTGGACTCATTGCCAACACATGTCATGTCCTTATTTCTAATGCCTTCAGGTGGAGGATACCATACAAGTTGAGGACTTTCTATGTTAGGTAATAAGGAGGGCAGAGGTATTCACTAAGTGAAATGCCAAACTGCTCAGCTTATGGTTGACTTGGTATTAGGAATCTGGGGCTTCAAAACAGATGCTTATTGACAAAATGGAGGTTTGTTGGTGAGGATCATGCACTCTGGAAGGAAGTAACTATAAAAATATGGGCAGAGTAACTATTTGTGTTCTAATATGGTCTATGTTGGCTGGGAATATAGACTGTAGTGTGTGGAATGACACCTAGATCCTTTTTCCGAGAGATAAATGGATTGGACTCGAGCCTTTAATGAGCTCATTTTCGGAACTGTTCTCATTTTGTAGCAACTCTGAAGCATCAATAGTTGACACTCTGGGTGTGTTTGTGTCACGACCCAAACCGGGTTGCGACTGGCACCCACACTTACCCTCCTATGTGAGCGAACCAACCAATCTAAACCTTAACATTTCAATGTAATAACAGTAGAAAATAATGCGGAAGACTTAACTCATTAATAAAATCAATTCAATAACTATCAATATTCAACATCTATTATTCCCAAAACCTGGAAGTCATCATCACAAGAACATCTACGATCAAATGACTAAACTAAGAGTATTCTAAAAGCTAAAAATACATAAGAAGCTAGTCCATGCCGGAAGTTCAAGGCATCAAGACTTGAAGAAGAAGATCCAGTCCAAGCTAGAAGCATTAGCTCACCCTGAATTTCCGATGTAGTAAGACTGGCTTGAATTACTGTTGAGTTGAAGACGATGGCACGTTTGCTGCACTCCACAAATAAACAAGAAGAAAACATAAAAGTAGGGGTCAGTACAAAACACGGGTACTGAGTAGATATCATCGGCCAACTCAAAATAGGGAACAGTATATATCAATATTATCGTAAATCAACTATAAAACTCAACATGTAGCCACAACAAGTATTATAATCATCAATAAGTACCATCAAGTTCATCCATGAGGGCTCAAGCCTCAACACCATACTCATTTGGGAATTATGTTCGTTAGATTGAGTATATTAACATCTTTCAAGATTCATTATCTTTAATTCTCTTGTGTCGGTACGTGACACTCCGATCCCTCATATTCATTATTCCTCTTGTGTCGGTACGTGACACTCTGATCCCCTATATCTACGTGTCGGTTCGTGACACCCGATCCCCTACATCATTCTGTAAATCATCAGGCCTTCTCTATACCAAGGTATCATCAATCCTATTACTTTAATTCATCAAGCCTTCTTCTATACCAAGGCATCATCATTAATAATGTATATTAAAGTTTCCTTTCAAGATTTGGGATTCAATATTTTCATCATGCTTATCTTATCACAATCACATAATCATATTCACGCAAACATACAATTAAGCTTATAGTAGGGTTTACAATACTACCAATACATATCATTCTCTATTAAGAGTTTACTATGAAAGCATGAAAACCATAACCTACCTCCACCGAAGAGTTGAATCAAGCAAGAATTTTCCCAAAGCTTTGTTTCTCCCTTCTCGTTCGATTTTCTCTCTCTCTCTTGTTCTTTCTATTTTCTTTATTCAAACCCTCTTTCTTTTACCCTAATTAGTATATAATTAAGAATAAAAGATGGCAATAATACCCCACTAATTAACTTAGGGTTACCTCTTTTAACCCCTCAAGAATTTGAGTTATTAATATAACCCCACGAACTTTATAATTAAGGCAAGAATAGTCAAAAACGTCCCTTAAAACTTAACCAGAAATCCGACTCTGCCTGGGATTTGCGCAACCTGTGACGGGCCGTCGTGCCTGCGACGGTCCGTCCTGCAGGTCGTCGCAGAGTTCAGAGACCCAAATTTCCACCAAGGGTCTGTGACGGTCCGTCACACCTGTGACGGTCCGTCCTGCCATTCCGTCACAAAGTTCAGAGAGTCGATTTTTAGTACCCAATTTCAGATTTTCTAAGTGTTTTGAAACGAGACCCTGCGACGGTCCCTCGTGCCCTTGACGGTCCGTCGTGGGGTCCGTCGCTTCTGCCAGTTTTTCCAGAATTGAAGTCTGTTGCTCAAAACGACTAAACGGGTCGTTACAGTTTGGTATGGAGGAAAATGTTTTCCATGGAAAATGTTTTCCTAGAAAATGTTTTCCTGGAAAACAAGTAAATTTTGGACTTATTTTCTCATGTTTGGTTGGTGAGTAGAAAATATTTTCTGGATATGATTTTTAGTGTTTGATTTATGAATGAAAAATGTTTTTGAGAGACATTTTTTATTTTTACTAGAGTAAAAAATAATTTATGATATTGAAAATATTTTTCAAAATCAAAATTATTATTTTTTTGGGTGGTGGTGGGGGTGGGGTGGGGGCAGGGCGGGGGGAGGGGGAGGGGATAGGAGTGAAAAAATAAAAATTTGAATTTGATAGTATTTTTAAAAAACAAAATTAATTTTTTTGGGGATTGGGGTGGGTGGGGGCTGGTAGGGGGGCTGGCCGGGAGTGGGGGGGAGGGGTAGGAGTTAAAAAATAAAAAATTTGAAGTTGAAAATATTTTTAAAAAGCAAAATTAATTTTTTGAGGAGGGGTTGGGGTTGGGGTTGGGGGGGGCTGGCCGGGGGTTAGGGTCAAGGATCTGGTGAAAAAATAAAATTTTGAAATTGAAAATATTTATTTAAATTGATGATTTTCCCAAAAAAAAGTAATTTGAAATTGGAGGTGAGTTATGGAAAATGTTTTCCTTAATTTTTGAAGGGAAGTCATTTTCCTTAATTTTGAGGAAAATGAGTTGATTTGGAAATCATTTTCCGAAACTTTTGTCCCAACCAAACATGTGGAAATTGGAAAACATTTTCCAGAAAATGTTTTCCTTCATACCAAACACACTCTCTGTCCCCTCAAGGTGGAATCTCACATTCAGAAGGCACTTGAATGATTGAGAAGTGGGTAGATTTGTTGAGTTATTACAAGTGCTTAGTGGTTTCTTAGGTTTATCTACAGGATCAGACACAATGAGGTGGGAACATGACAGTGATGACTAGTTCTTATTAAGAAGACTCTAGAGAAATGAAGTGGTGGAGCAACCAGGAAGGAGGGGACATACCAGGTCCTTGGAAACAGATTTGGAAGTGCAGTGTCCCAAACAAGGTGCACTTGGTTGGTGACCTGAAGAGCATGTCTCACTGATGAAAAATTGGAAAGGAGGGGCTTTCAGATGGTATCCAGATGTTTTGTTTTTGGGCTAGGAGAATGAAGAAACTAATAATCATCTTTTCTTCATTGGAAGATTGTATCACAGATCTGGTCTGTGTTTCCAAGTATATCTCGAGCAAATTGGGTAACGCCTGAACACATTGCTGACCTACTTAGCTGATGCATAAGGAGTGGAGGGAGGGAACAGAGTCAGAAGGGACGGTAAGATAATACCATATTGCATATAGTGGTCAGTATGGAGAGAAGAAACAACAGATGCTTTGAGGATATCTCTAACCCAATCTAGATAATCAAAGAAAATTGTATGAATATTTTGTATTTTTGATGTAAAGAAAGGGTTTAGAAATAGCAGAGCAGTTAGCAGATATTTTAGGATGTTTGTACATTTCTGAATTTTGCTCACCTGCACATGCAAATACTCTTTGATTTGTTACTTCTTAAAATTGGGAAATTGACAAGGTTTTCCACATGGTACAACACACGGCATGGAGTTTGGGCTGAAACAGCCCGTCATGTATCTAAGAATGTGAGAGCCGCTTTAATATAGAACTTTGGTTGGGTATGTCCGCTAGCTAGCCCTTTCAGTATTTGCGAGTTGCACACTTGTTCTGAATATAGCTCACCTGCACATCCATATACTCCTTTGATTTGTTACTTCTTGAAATTGAGAAATTGACAAGGTTTTCTACATGGTACACATGGCATGAAGTTTGGGCTGACACGGCCCATCACGTGTCTTTAAGAATGTGAACTTCCCTTTAATATAGAACTTTGTCTGGTATGTCTGTTAGCTAGCCCTTTCAGCATTTGCGAGTTGCACAGTTTTGTTCTGAATTCTGCTCACCTGCACATGCAAATATGCTTTGATTAGTTACTTCTTGAAATTGAGAAATTGACAAGGTTTTCCACATGATACACATGACATGAAGTTTTTTAGCTTGTCACTTGTCTAAGAATGTGAATGTGTCTCTTTAATATAGAACTTTGTCTTGTGTATCTGCTAGCTATCCCTTTCAACATTTGTGAGTTGCACACTTCTGTTCTGAATTTTGCTCACCTGCACATGCAAATACTCTTTGATTTGTTACTTCTTGAAATTGAGAAATTGACAAGATTTTTCACATGGTACACATGGCACTAATTTTGGGCTAAAACATCTGGTCATGTTACAAGAATGTGAAATGTCGCTTTAATATAGAACTTTGTCTGGTATGTCTGCTAGCTAGCCCTTTCAGCATTTGCATGTTGCACACTTCTGTTCTAAATTTCGCTCACCTGCACATGCAAATACTGGTTGATTTGTTACTTCTTGAAATTTAGAAATTTACAAGGTTTTCACATGGTACATATTTCATGAAGTATGGGCTGATACAGCCCGTCATGTGTCTAAGAATGTGAACGTCCCTTTAGTATAGAACTTTATCTGGTATGTCTGCTAGTTAGCCCTCCCCCATTTTCCTTCTTGAATGCCTCTCCTCATCCTAAAATGGAGACAAGAACACCAACTTGAATTTTCTTTACTTTAGTAGTCTTTTTTTTTCTTCATCTTGTTTGTGTTCATCTCTTGCTTGTTGCTCTTTTTGATAAGGTAATGTTTTAATTAATGATTGGAGAAATCCCATATACAAGCCATACACCAAAAAATAAAGAATGTAAACCAAAATATTGTTCTCTACGAAAGGAAAACCAATCATCTATAAAACAGGCACCTTATGGGTGGTGTCATCTTATTTGTATTCACGTCTTTGCTTGTTGCTTATGTAGTTTATACAATTGTTGTTTATGTTTTGATGCATCATTTCACTTCTTGTGGCTCTAATGATGCACTTGATTATATTGAACTAACAGGTTGGAGCAAAAGATCACCAGCGTTTCCAAGCATCTTATGCAATTTTGCTGAAGGCCCGGTTGACTGCACTAAAGAAGAGGGAGAGGAAGGACAAGAGGAAGGCTACTGATTCTGACAAAAAGATGGATATTTCGAAAAAGAAATCTGCTGCTGCTAAAGCCTCTACATGAAACTTTAGTCCTTTGGTTTATTCCCCCATTTTGTTTCTAGGATAGAGTTGTAGGATTTGAACCCCATCCATTTGGGGCGACAAGTCTGAAACTTCATTACAACTCCACTGCATAGAATGAAGAAAGGAGGTGTTTTTACTCAATTTGATTATTCACATCTAAATTAGTCAAACTTTTTAAAGAGCTTGTTGGGTTATGGAACAGTTGAAGGAATTTTGTCATAATCTTGATCTTTTAATTCCTT</genome_strand>
        <mrna_strand>CTCTTCATCGCTGTGTTGAAGTTTTGGTTTTTGAGTTTTGAGATTTGCTGTTCGAAGATG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCGATTACAGCCAGACCCATTCCTCAATGAACTGACGAGTATGTTTGAGCGAACTACTGAGCATGGTTCCGTTTGGGTTACGCTTAAACACT............................................................................................CTTCTGATAAATCTAAAGCCCAACGGAATAAGATGAAGACAGCTGGTGAAACTCTTGAATTTAAGTGCCTCATCCGAGCAACTGATGGGAAAAAGAATATTTCCACAATG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGGAGCAAAAGATCACCAGCGTTTCCAAGCATCTTATGCAATTTTGCTGAAGGCCCGGTTGACTGCACTAAAGAAGAGGGAGAGGAAGGACAAGAGGAAGGCTACTGATTCTGACAAAAAGATGGATATTTCGAAAAAGAAATCTGCTGCTGCTAAAGCCTCTACATGAAACTTTAGTCCTTTGGTTTATTCCCCCATTTTGTTTCTAGGATAGAGTTGTAGGATTTGAACCCCATCCATTTGGGGCGACAAGTCTGAAACTTCATTACAACTCCACTGCATAGAATGAAGAAAGGAGGTGTTTTTACTCAATTTGATTATTCACATCTAAATTAGTCAAACTTTTTAAAGAGCTTGTTGGGTTATGGAACAGTTGAAGGAATTTTGTCATAATCTTGATCTTTTAATTCCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E262988" ref_strand="+" ref_description="SGN-E262988 [cLEG-59-O15]">
      <seq>gaagttttggtttttgagttttgagatttgctgttcgaagatggtgcgattacagccagacccattcctcaatgaactgacgagtatgtttgagcgaactactgagcatggttccgtttgggttacgcttaaacactcttctgataaatctaaagcccaacggaataagatgaagacagctggtgaaactcttgaatttaagtgcctcatccgagcaactgatgggaaaaagaatatttccacaatggttggagcaaaagatcaccagcgtttccaagcatcttatgcaattttgctgaaggcccggttgactgcactaaagaagagggagaggaaggacaagaggaaggctactgattctgacaaaaagatggatatttcgaaaaagaaatctgctgctgctaaagcctctacatgaaactttagtcctttggtttattcccccattttgtttctaggatagagttgtaggatttgaaccccatccatttggggcgacaagtctgaaacttcattacaactccactgcatagaatgaagaaaggaggtgtttttactcaatttgattattcacatctaaattagtcaaactttttaaagagcttgttgggttatggaacagttgaaggaattttgtcataatcttgatcttttaattccttgaacaacagctttggcaattgaaagtagatgggaccaaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0167M06.1" temp_strand="+" temp_description="C06HBa0167M06.1  AC211057.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0167M06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="73717" stop="83243"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="74017" g_stop="74059" g_length="43"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="43" r_length="43" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="74060" i_stop="74824" i_length="765">
            <donor d_prob="0.726" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="74825" g_stop="74918" g_length="94"/>
          <reference_exon_boundary r_type="cDNA" r_start="44" r_stop="137" r_length="94" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="74919" i_stop="75010" i_length="92">
            <donor d_prob="0.958" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="75011" g_stop="75120" g_length="110"/>
          <reference_exon_boundary r_type="cDNA" r_start="138" r_stop="247" r_length="110" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="75121" i_stop="82488" i_length="7368">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="82489" g_stop="82943" g_length="455"/>
          <reference_exon_boundary r_type="cDNA" r_start="248" r_stop="702" r_length="455" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0167M06.1" gen_strand="+" ref_id="SGN-E262988" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>702</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0167M06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E262988" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="74017" e_stop="74059"/>
          <exon e_start="74825" e_stop="74918"/>
          <exon e_start="75011" e_stop="75120"/>
          <exon e_start="82489" e_stop="82943"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAGTTTTGGTTTTTGAGTTTTGAGATTTGCTGTTCGAAGATGGTAAGCGCTAACTTCAACTCATCAAAATCAATTGATCGCAATACTCTTTCGAATCAAATCTGGAAATCAAACAATGTAGAATTTTTTGATGTTAATTTTTCTTTGTTTACGCCGTTTTCAGCTTTATTTGATCTATATTTCCTTTTTGAGATTATGGGTTTCTGTAGAGTATAAATTCATGTTAGATTCTTTGTGTTCTTGAGTTGTTATGTATGTATCCCGAATCTCACTATATTGAATTGTGGAAATTAGTTAATACCAGTTTAAAATGGTGCTTATCGATTGAATTAACTAATTGGGGGTTGAGGTGATGGAAAACTTTCCCACTTAGCATTATACTCGAGTGCTGATGAATTTGATGTGTAGGTTAGAAAATTTGTTGAATCTGATGTTTTTACTTCATCCTTTAACTGGATAAAGGAGGAGGATTACATGGGTTGGGTTGATAGCCAGCGTAGAAATAAGCGAAATTACAGGAATCTTCTAAGTCTACACACTGGTTTCATCCTTGCTTTCTCTCCTGAGCACACACTCAAGCTACCCAACTACTGTATTTCTTCCTCCTTTATTCAGGTGGCACTGGTGAAGCATGCTCACATTGTTTATGTTAAGTAATCACATTGTGGAGTTCAATGTGCTTCCTATTTGTGGATACAAAATTATATGGCATTTTGCTTATTTTTGGGAAGTTTGAAAGAAGTGGCTTTGTCCATCTTTTTGGTAGAACATAAGTTGACAATTACTGATCTGAATTGGATTTGTCAGGTGCGATTACAGCCAGACCCATTCCTCAATGAACTGACGAGTATGTTTGAGCGAACTACTGAGCATGGTTCCGTTTGGGTTACGCTTAAACACTGTGAGTTTGCCTCTTCGTTGGTTTTCCTGTGTTTTGTGCTTTGTATTCTCTTTATGAGTAATACTGATTGAGCAATCTTGTCCTTTGTATAGCTTCTGATAAATCTAAAGCCCAACGGAATAAGATGAAGACAGCTGGTGAAACTCTTGAATTTAAGTGCCTCATCCGAGCAACTGATGGGAAAAAGAATATTTCCACAATGGTAATTATCACAATAGAAAGTCTCTTACCTTTTTCCATCACCTTCTTTTTGCAAGTCTTGTCGTTTTCCCCATTTTTTTGCTTTGTTGGGCACTATGTTCTCTGGAACATTGAGGGTGTTAGTTTGTTGTATGAATTATTTTTTAGCATAAGTTTAAATGTGCAAATATAGATAATTCTAGGTCCTGGCCTGTATGTTTGAGATTGAGAGCATCAAATTCAAAAAAAGGATGGTAGCCTTGTGGTGCATAGAGAATGGGAGTCGTGGTCCTTGTTTACTTGATTGATAACTAATAGGTATCGTACATGCTTGTAATACAATATTAGAGCACATAAAGGGACAATTTCTCATAAAAGGCAAACAAATTATGGATGCAACTCTTTTAGTCAGTGAACCTGTGGATTCTAGACTCGAAGGTGAAGATCCAGGGATCATGTGAAACCTAGCTATAGAGAACCCATTATGATCATGTCAACTGGGAGTTACTTCTCAACCTTCTTTAAAAAATGGGTTTTGGTGGAAGATGGTTAAAGTGGATGGTTTTTGTATCAATACTGTCCTGAATTCTAGTCATAGGAGAAATTGCTGGAATTTTCCCTCAGAGAAAGAGGACTCGGGGAGACCCCCCTCTCTTTGCCTTTTCATATTAGCTATGGAAGGTTTCAGTAGTATGATGAGAGGTACTATTCAGAACAGTGGATAAAAGGTTTCAGGATAGGCAATCAAGCAGGGGAAGAGATGTAGATTTCCTTTCATTATTGCTGATGATATAGTTGTTTTCTAAGATGCTAAAGCAGATCAGATCATGTACATCAGAATGATTTTGGTGATCTTTGGGCAATTTTTGGTCCATTTGTAAAATTGGAGGAAAGGTAGTAGTTTCCCTGTCAAAGAAGTTCCACAAATTCAATGCCTGTCCATGTTATAAGTTTCGATGATTTAACAAACTATGACATCTAGTTGGGGACCTGATCCCATGAGGGACTGAGAGTTTCAGGCAATGTGCAAAGGACAGTTGTAAAGCTGCAACTGCTGCCACAATTGCAGTGGTTGGTGCACCTTTTCAGAGGAATAGTACTCAGCCAATGGCGTTGCACTAGGTAGTTTGTCCATCTTATAATAGTCATCTTGTCAAGGGACGTTTCCTAATTTTTGAGTTGAAGATTTCCATACGGCAAAATCCACTCTCAAAAAGAAATATTCTCATATGCATCAAGAGATCTGATCGAGTGATCTACTGTTCCCTTTAGTTGTTATTTTAGTTTATCGTCTCGTGTTTATACAGTGTAAGATCTGTTCATATGTTATAAAGGAATCAGATCATTTCAGTTGTAATCGTTGTTAAAAGTTTGAGTTGTAGCTAGAGTTAGCTATGTCGTGTTCTTGAAGTCTACATTAACTTAGCTTGTTGGCGTAGTAGGCAATAGAGGTATTACTTTGTTTATGAGTAACAAAGCTGTTACGAAAGGAGAAGGGATTAAGAGTTCATTTCCTAGGTTGCAAGAGTTTGTAATCGGGATCTTAACTCTTTGAAGTAATGGAATTGGCGAAATCCTGTGAGACAGGTTGTGATTTTCTCCTTCCTTAAGCAAGGGGGTTAACACGTAAACATTTTGTGTTCTTTATTTTAAGTTTTTCTTTCTGCACTGTTCTTACTATGTGAACGGACTTGGTCCATTGACTTGTGGTGGACGCATGTAAGTCATCAGTCCAACATCTTGAGTTGTAAAATTGAGAATTTCCCGACCAACTTACTTGGGGATGCCCCTTGGAAACAATCATAAGGAGCTAGAAGTTTGGGATGAGATTATTGAAAAAATTAGTAACCAAACTCAAAATGTGTTGAGCGCTCGACTTGCTTTATGTGCGCTTCGGTGTCGTCACCAGTGTTCTAAGACATATTTTTCCTTGCCAATGTGTCTCTGCCGAAGAGGTGACACTAAACAATTGATATTTCACTTAATCACATTTTTTTTGAAAAGGTACTTTATCATTATTTTTTTCGATTTCTTCAGTCATATATTTGTTATTTGTGTTTATAATTATTCGTCTTGGACTCAGCATATATATTTGTAATTTTTTCTCCCTTTGTGCCTTTTTTCATTAAAGCCCATTCTTTGTTTGCACATAAAGGTCCAATGGGCCTTAGAGTTTTTTTGCGCTTTTCGCGTTTGATAACACTTGAAAAACTAGCCAATTGGAAAGCCCGATGTTTATCTCTTGGAGGAAGTAGTACTCTTATGAACTCAGTATTGGACTCATTGCCAACACATGTCATGTCCTTATTTCTAATGCCTTCAGGTGGAGGATACCATACAAGTTGAGGACTTTCTATGTTAGGTAATAAGGAGGGCAGAGGTATTCACTAAGTGAAATGCCAAACTGCTCAGCTTATGGTTGACTTGGTATTAGGAATCTGGGGCTTCAAAACAGATGCTTATTGACAAAATGGAGGTTTGTTGGTGAGGATCATGCACTCTGGAAGGAAGTAACTATAAAAATATGGGCAGAGTAACTATTTGTGTTCTAATATGGTCTATGTTGGCTGGGAATATAGACTGTAGTGTGTGGAATGACACCTAGATCCTTTTTCCGAGAGATAAATGGATTGGACTCGAGCCTTTAATGAGCTCATTTTCGGAACTGTTCTCATTTTGTAGCAACTCTGAAGCATCAATAGTTGACACTCTGGGTGTGTTTGTGTCACGACCCAAACCGGGTTGCGACTGGCACCCACACTTACCCTCCTATGTGAGCGAACCAACCAATCTAAACCTTAACATTTCAATGTAATAACAGTAGAAAATAATGCGGAAGACTTAACTCATTAATAAAATCAATTCAATAACTATCAATATTCAACATCTATTATTCCCAAAACCTGGAAGTCATCATCACAAGAACATCTACGATCAAATGACTAAACTAAGAGTATTCTAAAAGCTAAAAATACATAAGAAGCTAGTCCATGCCGGAAGTTCAAGGCATCAAGACTTGAAGAAGAAGATCCAGTCCAAGCTAGAAGCATTAGCTCACCCTGAATTTCCGATGTAGTAAGACTGGCTTGAATTACTGTTGAGTTGAAGACGATGGCACGTTTGCTGCACTCCACAAATAAACAAGAAGAAAACATAAAAGTAGGGGTCAGTACAAAACACGGGTACTGAGTAGATATCATCGGCCAACTCAAAATAGGGAACAGTATATATCAATATTATCGTAAATCAACTATAAAACTCAACATGTAGCCACAACAAGTATTATAATCATCAATAAGTACCATCAAGTTCATCCATGAGGGCTCAAGCCTCAACACCATACTCATTTGGGAATTATGTTCGTTAGATTGAGTATATTAACATCTTTCAAGATTCATTATCTTTAATTCTCTTGTGTCGGTACGTGACACTCCGATCCCTCATATTCATTATTCCTCTTGTGTCGGTACGTGACACTCTGATCCCCTATATCTACGTGTCGGTTCGTGACACCCGATCCCCTACATCATTCTGTAAATCATCAGGCCTTCTCTATACCAAGGTATCATCAATCCTATTACTTTAATTCATCAAGCCTTCTTCTATACCAAGGCATCATCATTAATAATGTATATTAAAGTTTCCTTTCAAGATTTGGGATTCAATATTTTCATCATGCTTATCTTATCACAATCACATAATCATATTCACGCAAACATACAATTAAGCTTATAGTAGGGTTTACAATACTACCAATACATATCATTCTCTATTAAGAGTTTACTATGAAAGCATGAAAACCATAACCTACCTCCACCGAAGAGTTGAATCAAGCAAGAATTTTCCCAAAGCTTTGTTTCTCCCTTCTCGTTCGATTTTCTCTCTCTCTCTTGTTCTTTCTATTTTCTTTATTCAAACCCTCTTTCTTTTACCCTAATTAGTATATAATTAAGAATAAAAGATGGCAATAATACCCCACTAATTAACTTAGGGTTACCTCTTTTAACCCCTCAAGAATTTGAGTTATTAATATAACCCCACGAACTTTATAATTAAGGCAAGAATAGTCAAAAACGTCCCTTAAAACTTAACCAGAAATCCGACTCTGCCTGGGATTTGCGCAACCTGTGACGGGCCGTCGTGCCTGCGACGGTCCGTCCTGCAGGTCGTCGCAGAGTTCAGAGACCCAAATTTCCACCAAGGGTCTGTGACGGTCCGTCACACCTGTGACGGTCCGTCCTGCCATTCCGTCACAAAGTTCAGAGAGTCGATTTTTAGTACCCAATTTCAGATTTTCTAAGTGTTTTGAAACGAGACCCTGCGACGGTCCCTCGTGCCCTTGACGGTCCGTCGTGGGGTCCGTCGCTTCTGCCAGTTTTTCCAGAATTGAAGTCTGTTGCTCAAAACGACTAAACGGGTCGTTACAGTTTGGTATGGAGGAAAATGTTTTCCATGGAAAATGTTTTCCTAGAAAATGTTTTCCTGGAAAACAAGTAAATTTTGGACTTATTTTCTCATGTTTGGTTGGTGAGTAGAAAATATTTTCTGGATATGATTTTTAGTGTTTGATTTATGAATGAAAAATGTTTTTGAGAGACATTTTTTATTTTTACTAGAGTAAAAAATAATTTATGATATTGAAAATATTTTTCAAAATCAAAATTATTATTTTTTTGGGTGGTGGTGGGGGTGGGGTGGGGGCAGGGCGGGGGGAGGGGGAGGGGATAGGAGTGAAAAAATAAAAATTTGAATTTGATAGTATTTTTAAAAAACAAAATTAATTTTTTTGGGGATTGGGGTGGGTGGGGGCTGGTAGGGGGGCTGGCCGGGAGTGGGGGGGAGGGGTAGGAGTTAAAAAATAAAAAATTTGAAGTTGAAAATATTTTTAAAAAGCAAAATTAATTTTTTGAGGAGGGGTTGGGGTTGGGGTTGGGGGGGGCTGGCCGGGGGTTAGGGTCAAGGATCTGGTGAAAAAATAAAATTTTGAAATTGAAAATATTTATTTAAATTGATGATTTTCCCAAAAAAAAGTAATTTGAAATTGGAGGTGAGTTATGGAAAATGTTTTCCTTAATTTTTGAAGGGAAGTCATTTTCCTTAATTTTGAGGAAAATGAGTTGATTTGGAAATCATTTTCCGAAACTTTTGTCCCAACCAAACATGTGGAAATTGGAAAACATTTTCCAGAAAATGTTTTCCTTCATACCAAACACACTCTCTGTCCCCTCAAGGTGGAATCTCACATTCAGAAGGCACTTGAATGATTGAGAAGTGGGTAGATTTGTTGAGTTATTACAAGTGCTTAGTGGTTTCTTAGGTTTATCTACAGGATCAGACACAATGAGGTGGGAACATGACAGTGATGACTAGTTCTTATTAAGAAGACTCTAGAGAAATGAAGTGGTGGAGCAACCAGGAAGGAGGGGACATACCAGGTCCTTGGAAACAGATTTGGAAGTGCAGTGTCCCAAACAAGGTGCACTTGGTTGGTGACCTGAAGAGCATGTCTCACTGATGAAAAATTGGAAAGGAGGGGCTTTCAGATGGTATCCAGATGTTTTGTTTTTGGGCTAGGAGAATGAAGAAACTAATAATCATCTTTTCTTCATTGGAAGATTGTATCACAGATCTGGTCTGTGTTTCCAAGTATATCTCGAGCAAATTGGGTAACGCCTGAACACATTGCTGACCTACTTAGCTGATGCATAAGGAGTGGAGGGAGGGAACAGAGTCAGAAGGGACGGTAAGATAATACCATATTGCATATAGTGGTCAGTATGGAGAGAAGAAACAACAGATGCTTTGAGGATATCTCTAACCCAATCTAGATAATCAAAGAAAATTGTATGAATATTTTGTATTTTTGATGTAAAGAAAGGGTTTAGAAATAGCAGAGCAGTTAGCAGATATTTTAGGATGTTTGTACATTTCTGAATTTTGCTCACCTGCACATGCAAATACTCTTTGATTTGTTACTTCTTAAAATTGGGAAATTGACAAGGTTTTCCACATGGTACAACACACGGCATGGAGTTTGGGCTGAAACAGCCCGTCATGTATCTAAGAATGTGAGAGCCGCTTTAATATAGAACTTTGGTTGGGTATGTCCGCTAGCTAGCCCTTTCAGTATTTGCGAGTTGCACACTTGTTCTGAATATAGCTCACCTGCACATCCATATACTCCTTTGATTTGTTACTTCTTGAAATTGAGAAATTGACAAGGTTTTCTACATGGTACACATGGCATGAAGTTTGGGCTGACACGGCCCATCACGTGTCTTTAAGAATGTGAACTTCCCTTTAATATAGAACTTTGTCTGGTATGTCTGTTAGCTAGCCCTTTCAGCATTTGCGAGTTGCACAGTTTTGTTCTGAATTCTGCTCACCTGCACATGCAAATATGCTTTGATTAGTTACTTCTTGAAATTGAGAAATTGACAAGGTTTTCCACATGATACACATGACATGAAGTTTTTTAGCTTGTCACTTGTCTAAGAATGTGAATGTGTCTCTTTAATATAGAACTTTGTCTTGTGTATCTGCTAGCTATCCCTTTCAACATTTGTGAGTTGCACACTTCTGTTCTGAATTTTGCTCACCTGCACATGCAAATACTCTTTGATTTGTTACTTCTTGAAATTGAGAAATTGACAAGATTTTTCACATGGTACACATGGCACTAATTTTGGGCTAAAACATCTGGTCATGTTACAAGAATGTGAAATGTCGCTTTAATATAGAACTTTGTCTGGTATGTCTGCTAGCTAGCCCTTTCAGCATTTGCATGTTGCACACTTCTGTTCTAAATTTCGCTCACCTGCACATGCAAATACTGGTTGATTTGTTACTTCTTGAAATTTAGAAATTTACAAGGTTTTCACATGGTACATATTTCATGAAGTATGGGCTGATACAGCCCGTCATGTGTCTAAGAATGTGAACGTCCCTTTAGTATAGAACTTTATCTGGTATGTCTGCTAGTTAGCCCTCCCCCATTTTCCTTCTTGAATGCCTCTCCTCATCCTAAAATGGAGACAAGAACACCAACTTGAATTTTCTTTACTTTAGTAGTCTTTTTTTTTCTTCATCTTGTTTGTGTTCATCTCTTGCTTGTTGCTCTTTTTGATAAGGTAATGTTTTAATTAATGATTGGAGAAATCCCATATACAAGCCATACACCAAAAAATAAAGAATGTAAACCAAAATATTGTTCTCTACGAAAGGAAAACCAATCATCTATAAAACAGGCACCTTATGGGTGGTGTCATCTTATTTGTATTCACGTCTTTGCTTGTTGCTTATGTAGTTTATACAATTGTTGTTTATGTTTTGATGCATCATTTCACTTCTTGTGGCTCTAATGATGCACTTGATTATATTGAACTAACAGGTTGGAGCAAAAGATCACCAGCGTTTCCAAGCATCTTATGCAATTTTGCTGAAGGCCCGGTTGACTGCACTAAAGAAGAGGGAGAGGAAGGACAAGAGGAAGGCTACTGATTCTGACAAAAAGATGGATATTTCGAAAAAGAAATCTGCTGCTGCTAAAGCCTCTACATGAAACTTTAGTCCTTTGGTTTATTCCCCCATTTTGTTTCTAGGATAGAGTTGTAGGATTTGAACCCCATCCATTTGGGGCGACAAGTCTGAAACTTCATTACAACTCCACTGCATAGAATGAAGAAAGGAGGTGTTTTTACTCAATTTGATTATTCACATCTAAATTAGTCAAACTTTTTAAAGAGCTTGTTGGGTTATGGAACAGTTGAAGGAATTTTGTCATAATCTTGATCTTTTAATTCCTTGAACAACAGCTTTGGCAATTGAAAGTAGATGGGACCAAAT</genome_strand>
        <mrna_strand>GAAGTTTTGGTTTTTGAGTTTTGAGATTTGCTGTTCGAAGATG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCGATTACAGCCAGACCCATTCCTCAATGAACTGACGAGTATGTTTGAGCGAACTACTGAGCATGGTTCCGTTTGGGTTACGCTTAAACACT............................................................................................CTTCTGATAAATCTAAAGCCCAACGGAATAAGATGAAGACAGCTGGTGAAACTCTTGAATTTAAGTGCCTCATCCGAGCAACTGATGGGAAAAAGAATATTTCCACAATG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGGAGCAAAAGATCACCAGCGTTTCCAAGCATCTTATGCAATTTTGCTGAAGGCCCGGTTGACTGCACTAAAGAAGAGGGAGAGGAAGGACAAGAGGAAGGCTACTGATTCTGACAAAAAGATGGATATTTCGAAAAAGAAATCTGCTGCTGCTAAAGCCTCTACATGAAACTTTAGTCCTTTGGTTTATTCCCCCATTTTGTTTCTAGGATAGAGTTGTAGGATTTGAACCCCATCCATTTGGGGCGACAAGTCTGAAACTTCATTACAACTCCACTGCATAGAATGAAGAAAGGAGGTGTTTTTACTCAATTTGATTATTCACATCTAAATTAGTCAAACTTTTTAAAGAGCTTGTTGGGTTATGGAACAGTTGAAGGAATTTTGTCATAATCTTGATCTTTTAATTCCTTGAACAACAGCTTTGGCAATTGAAAGTAGATGGGACCAAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E264799" ref_strand="+" ref_description="SGN-E264799 [cLEG-71-B2]">
      <seq>gaagttttggtttttgagttttgagatttgctgttcgaagatggtgcgattacagccagacccattcctcaatgaactgacgagtatgtttgagcgaactactgagcatggttccgtttgggttacgcttaaacactcttctgataaatctaaagcccaacggaataagatgaagacagctggtgaaactcttgaatttaagtgcctcatccgagcaactgatgggaaaaagaatatttccacaatggttggagcaaaagatcaccagcgtttccaagcatcttatgcaattttgctgaaggcccggttgactgcactaaagaagagggagaggaaggacaagaggaaggctactgattctgacaaaaagatggatatttcgaaaaagaaatctgctgctgctaaagcctctacatgaaactttagtcctttggtttattcccccattttgtttctaggatagagttgtangatttgaaccccatccatttggggcgacaagtctgaaacttcattacaactccactgcatagaatgaagaaaaggagtgtttttactcaatttgatta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0167M06.1" temp_strand="+" temp_description="C06HBa0167M06.1  AC211057.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0167M06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="73717" stop="83110"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="74017" g_stop="74059" g_length="43"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="43" r_length="43" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="74060" i_stop="74824" i_length="765">
            <donor d_prob="0.726" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="74825" g_stop="74918" g_length="94"/>
          <reference_exon_boundary r_type="cDNA" r_start="44" r_stop="137" r_length="94" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="74919" i_stop="75010" i_length="92">
            <donor d_prob="0.958" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="75011" g_stop="75120" g_length="110"/>
          <reference_exon_boundary r_type="cDNA" r_start="138" r_stop="247" r_length="110" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="75121" i_stop="82488" i_length="7368">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="82489" g_stop="82810" g_length="322"/>
          <reference_exon_boundary r_type="cDNA" r_start="248" r_stop="569" r_length="322" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0167M06.1" gen_strand="+" ref_id="SGN-E264799" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>569</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0167M06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E264799" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="74017" e_stop="74059"/>
          <exon e_start="74825" e_stop="74918"/>
          <exon e_start="75011" e_stop="75120"/>
          <exon e_start="82489" e_stop="82810"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAGTTTTGGTTTTTGAGTTTTGAGATTTGCTGTTCGAAGATGGTAAGCGCTAACTTCAACTCATCAAAATCAATTGATCGCAATACTCTTTCGAATCAAATCTGGAAATCAAACAATGTAGAATTTTTTGATGTTAATTTTTCTTTGTTTACGCCGTTTTCAGCTTTATTTGATCTATATTTCCTTTTTGAGATTATGGGTTTCTGTAGAGTATAAATTCATGTTAGATTCTTTGTGTTCTTGAGTTGTTATGTATGTATCCCGAATCTCACTATATTGAATTGTGGAAATTAGTTAATACCAGTTTAAAATGGTGCTTATCGATTGAATTAACTAATTGGGGGTTGAGGTGATGGAAAACTTTCCCACTTAGCATTATACTCGAGTGCTGATGAATTTGATGTGTAGGTTAGAAAATTTGTTGAATCTGATGTTTTTACTTCATCCTTTAACTGGATAAAGGAGGAGGATTACATGGGTTGGGTTGATAGCCAGCGTAGAAATAAGCGAAATTACAGGAATCTTCTAAGTCTACACACTGGTTTCATCCTTGCTTTCTCTCCTGAGCACACACTCAAGCTACCCAACTACTGTATTTCTTCCTCCTTTATTCAGGTGGCACTGGTGAAGCATGCTCACATTGTTTATGTTAAGTAATCACATTGTGGAGTTCAATGTGCTTCCTATTTGTGGATACAAAATTATATGGCATTTTGCTTATTTTTGGGAAGTTTGAAAGAAGTGGCTTTGTCCATCTTTTTGGTAGAACATAAGTTGACAATTACTGATCTGAATTGGATTTGTCAGGTGCGATTACAGCCAGACCCATTCCTCAATGAACTGACGAGTATGTTTGAGCGAACTACTGAGCATGGTTCCGTTTGGGTTACGCTTAAACACTGTGAGTTTGCCTCTTCGTTGGTTTTCCTGTGTTTTGTGCTTTGTATTCTCTTTATGAGTAATACTGATTGAGCAATCTTGTCCTTTGTATAGCTTCTGATAAATCTAAAGCCCAACGGAATAAGATGAAGACAGCTGGTGAAACTCTTGAATTTAAGTGCCTCATCCGAGCAACTGATGGGAAAAAGAATATTTCCACAATGGTAATTATCACAATAGAAAGTCTCTTACCTTTTTCCATCACCTTCTTTTTGCAAGTCTTGTCGTTTTCCCCATTTTTTTGCTTTGTTGGGCACTATGTTCTCTGGAACATTGAGGGTGTTAGTTTGTTGTATGAATTATTTTTTAGCATAAGTTTAAATGTGCAAATATAGATAATTCTAGGTCCTGGCCTGTATGTTTGAGATTGAGAGCATCAAATTCAAAAAAAGGATGGTAGCCTTGTGGTGCATAGAGAATGGGAGTCGTGGTCCTTGTTTACTTGATTGATAACTAATAGGTATCGTACATGCTTGTAATACAATATTAGAGCACATAAAGGGACAATTTCTCATAAAAGGCAAACAAATTATGGATGCAACTCTTTTAGTCAGTGAACCTGTGGATTCTAGACTCGAAGGTGAAGATCCAGGGATCATGTGAAACCTAGCTATAGAGAACCCATTATGATCATGTCAACTGGGAGTTACTTCTCAACCTTCTTTAAAAAATGGGTTTTGGTGGAAGATGGTTAAAGTGGATGGTTTTTGTATCAATACTGTCCTGAATTCTAGTCATAGGAGAAATTGCTGGAATTTTCCCTCAGAGAAAGAGGACTCGGGGAGACCCCCCTCTCTTTGCCTTTTCATATTAGCTATGGAAGGTTTCAGTAGTATGATGAGAGGTACTATTCAGAACAGTGGATAAAAGGTTTCAGGATAGGCAATCAAGCAGGGGAAGAGATGTAGATTTCCTTTCATTATTGCTGATGATATAGTTGTTTTCTAAGATGCTAAAGCAGATCAGATCATGTACATCAGAATGATTTTGGTGATCTTTGGGCAATTTTTGGTCCATTTGTAAAATTGGAGGAAAGGTAGTAGTTTCCCTGTCAAAGAAGTTCCACAAATTCAATGCCTGTCCATGTTATAAGTTTCGATGATTTAACAAACTATGACATCTAGTTGGGGACCTGATCCCATGAGGGACTGAGAGTTTCAGGCAATGTGCAAAGGACAGTTGTAAAGCTGCAACTGCTGCCACAATTGCAGTGGTTGGTGCACCTTTTCAGAGGAATAGTACTCAGCCAATGGCGTTGCACTAGGTAGTTTGTCCATCTTATAATAGTCATCTTGTCAAGGGACGTTTCCTAATTTTTGAGTTGAAGATTTCCATACGGCAAAATCCACTCTCAAAAAGAAATATTCTCATATGCATCAAGAGATCTGATCGAGTGATCTACTGTTCCCTTTAGTTGTTATTTTAGTTTATCGTCTCGTGTTTATACAGTGTAAGATCTGTTCATATGTTATAAAGGAATCAGATCATTTCAGTTGTAATCGTTGTTAAAAGTTTGAGTTGTAGCTAGAGTTAGCTATGTCGTGTTCTTGAAGTCTACATTAACTTAGCTTGTTGGCGTAGTAGGCAATAGAGGTATTACTTTGTTTATGAGTAACAAAGCTGTTACGAAAGGAGAAGGGATTAAGAGTTCATTTCCTAGGTTGCAAGAGTTTGTAATCGGGATCTTAACTCTTTGAAGTAATGGAATTGGCGAAATCCTGTGAGACAGGTTGTGATTTTCTCCTTCCTTAAGCAAGGGGGTTAACACGTAAACATTTTGTGTTCTTTATTTTAAGTTTTTCTTTCTGCACTGTTCTTACTATGTGAACGGACTTGGTCCATTGACTTGTGGTGGACGCATGTAAGTCATCAGTCCAACATCTTGAGTTGTAAAATTGAGAATTTCCCGACCAACTTACTTGGGGATGCCCCTTGGAAACAATCATAAGGAGCTAGAAGTTTGGGATGAGATTATTGAAAAAATTAGTAACCAAACTCAAAATGTGTTGAGCGCTCGACTTGCTTTATGTGCGCTTCGGTGTCGTCACCAGTGTTCTAAGACATATTTTTCCTTGCCAATGTGTCTCTGCCGAAGAGGTGACACTAAACAATTGATATTTCACTTAATCACATTTTTTTTGAAAAGGTACTTTATCATTATTTTTTTCGATTTCTTCAGTCATATATTTGTTATTTGTGTTTATAATTATTCGTCTTGGACTCAGCATATATATTTGTAATTTTTTCTCCCTTTGTGCCTTTTTTCATTAAAGCCCATTCTTTGTTTGCACATAAAGGTCCAATGGGCCTTAGAGTTTTTTTGCGCTTTTCGCGTTTGATAACACTTGAAAAACTAGCCAATTGGAAAGCCCGATGTTTATCTCTTGGAGGAAGTAGTACTCTTATGAACTCAGTATTGGACTCATTGCCAACACATGTCATGTCCTTATTTCTAATGCCTTCAGGTGGAGGATACCATACAAGTTGAGGACTTTCTATGTTAGGTAATAAGGAGGGCAGAGGTATTCACTAAGTGAAATGCCAAACTGCTCAGCTTATGGTTGACTTGGTATTAGGAATCTGGGGCTTCAAAACAGATGCTTATTGACAAAATGGAGGTTTGTTGGTGAGGATCATGCACTCTGGAAGGAAGTAACTATAAAAATATGGGCAGAGTAACTATTTGTGTTCTAATATGGTCTATGTTGGCTGGGAATATAGACTGTAGTGTGTGGAATGACACCTAGATCCTTTTTCCGAGAGATAAATGGATTGGACTCGAGCCTTTAATGAGCTCATTTTCGGAACTGTTCTCATTTTGTAGCAACTCTGAAGCATCAATAGTTGACACTCTGGGTGTGTTTGTGTCACGACCCAAACCGGGTTGCGACTGGCACCCACACTTACCCTCCTATGTGAGCGAACCAACCAATCTAAACCTTAACATTTCAATGTAATAACAGTAGAAAATAATGCGGAAGACTTAACTCATTAATAAAATCAATTCAATAACTATCAATATTCAACATCTATTATTCCCAAAACCTGGAAGTCATCATCACAAGAACATCTACGATCAAATGACTAAACTAAGAGTATTCTAAAAGCTAAAAATACATAAGAAGCTAGTCCATGCCGGAAGTTCAAGGCATCAAGACTTGAAGAAGAAGATCCAGTCCAAGCTAGAAGCATTAGCTCACCCTGAATTTCCGATGTAGTAAGACTGGCTTGAATTACTGTTGAGTTGAAGACGATGGCACGTTTGCTGCACTCCACAAATAAACAAGAAGAAAACATAAAAGTAGGGGTCAGTACAAAACACGGGTACTGAGTAGATATCATCGGCCAACTCAAAATAGGGAACAGTATATATCAATATTATCGTAAATCAACTATAAAACTCAACATGTAGCCACAACAAGTATTATAATCATCAATAAGTACCATCAAGTTCATCCATGAGGGCTCAAGCCTCAACACCATACTCATTTGGGAATTATGTTCGTTAGATTGAGTATATTAACATCTTTCAAGATTCATTATCTTTAATTCTCTTGTGTCGGTACGTGACACTCCGATCCCTCATATTCATTATTCCTCTTGTGTCGGTACGTGACACTCTGATCCCCTATATCTACGTGTCGGTTCGTGACACCCGATCCCCTACATCATTCTGTAAATCATCAGGCCTTCTCTATACCAAGGTATCATCAATCCTATTACTTTAATTCATCAAGCCTTCTTCTATACCAAGGCATCATCATTAATAATGTATATTAAAGTTTCCTTTCAAGATTTGGGATTCAATATTTTCATCATGCTTATCTTATCACAATCACATAATCATATTCACGCAAACATACAATTAAGCTTATAGTAGGGTTTACAATACTACCAATACATATCATTCTCTATTAAGAGTTTACTATGAAAGCATGAAAACCATAACCTACCTCCACCGAAGAGTTGAATCAAGCAAGAATTTTCCCAAAGCTTTGTTTCTCCCTTCTCGTTCGATTTTCTCTCTCTCTCTTGTTCTTTCTATTTTCTTTATTCAAACCCTCTTTCTTTTACCCTAATTAGTATATAATTAAGAATAAAAGATGGCAATAATACCCCACTAATTAACTTAGGGTTACCTCTTTTAACCCCTCAAGAATTTGAGTTATTAATATAACCCCACGAACTTTATAATTAAGGCAAGAATAGTCAAAAACGTCCCTTAAAACTTAACCAGAAATCCGACTCTGCCTGGGATTTGCGCAACCTGTGACGGGCCGTCGTGCCTGCGACGGTCCGTCCTGCAGGTCGTCGCAGAGTTCAGAGACCCAAATTTCCACCAAGGGTCTGTGACGGTCCGTCACACCTGTGACGGTCCGTCCTGCCATTCCGTCACAAAGTTCAGAGAGTCGATTTTTAGTACCCAATTTCAGATTTTCTAAGTGTTTTGAAACGAGACCCTGCGACGGTCCCTCGTGCCCTTGACGGTCCGTCGTGGGGTCCGTCGCTTCTGCCAGTTTTTCCAGAATTGAAGTCTGTTGCTCAAAACGACTAAACGGGTCGTTACAGTTTGGTATGGAGGAAAATGTTTTCCATGGAAAATGTTTTCCTAGAAAATGTTTTCCTGGAAAACAAGTAAATTTTGGACTTATTTTCTCATGTTTGGTTGGTGAGTAGAAAATATTTTCTGGATATGATTTTTAGTGTTTGATTTATGAATGAAAAATGTTTTTGAGAGACATTTTTTATTTTTACTAGAGTAAAAAATAATTTATGATATTGAAAATATTTTTCAAAATCAAAATTATTATTTTTTTGGGTGGTGGTGGGGGTGGGGTGGGGGCAGGGCGGGGGGAGGGGGAGGGGATAGGAGTGAAAAAATAAAAATTTGAATTTGATAGTATTTTTAAAAAACAAAATTAATTTTTTTGGGGATTGGGGTGGGTGGGGGCTGGTAGGGGGGCTGGCCGGGAGTGGGGGGGAGGGGTAGGAGTTAAAAAATAAAAAATTTGAAGTTGAAAATATTTTTAAAAAGCAAAATTAATTTTTTGAGGAGGGGTTGGGGTTGGGGTTGGGGGGGGCTGGCCGGGGGTTAGGGTCAAGGATCTGGTGAAAAAATAAAATTTTGAAATTGAAAATATTTATTTAAATTGATGATTTTCCCAAAAAAAAGTAATTTGAAATTGGAGGTGAGTTATGGAAAATGTTTTCCTTAATTTTTGAAGGGAAGTCATTTTCCTTAATTTTGAGGAAAATGAGTTGATTTGGAAATCATTTTCCGAAACTTTTGTCCCAACCAAACATGTGGAAATTGGAAAACATTTTCCAGAAAATGTTTTCCTTCATACCAAACACACTCTCTGTCCCCTCAAGGTGGAATCTCACATTCAGAAGGCACTTGAATGATTGAGAAGTGGGTAGATTTGTTGAGTTATTACAAGTGCTTAGTGGTTTCTTAGGTTTATCTACAGGATCAGACACAATGAGGTGGGAACATGACAGTGATGACTAGTTCTTATTAAGAAGACTCTAGAGAAATGAAGTGGTGGAGCAACCAGGAAGGAGGGGACATACCAGGTCCTTGGAAACAGATTTGGAAGTGCAGTGTCCCAAACAAGGTGCACTTGGTTGGTGACCTGAAGAGCATGTCTCACTGATGAAAAATTGGAAAGGAGGGGCTTTCAGATGGTATCCAGATGTTTTGTTTTTGGGCTAGGAGAATGAAGAAACTAATAATCATCTTTTCTTCATTGGAAGATTGTATCACAGATCTGGTCTGTGTTTCCAAGTATATCTCGAGCAAATTGGGTAACGCCTGAACACATTGCTGACCTACTTAGCTGATGCATAAGGAGTGGAGGGAGGGAACAGAGTCAGAAGGGACGGTAAGATAATACCATATTGCATATAGTGGTCAGTATGGAGAGAAGAAACAACAGATGCTTTGAGGATATCTCTAACCCAATCTAGATAATCAAAGAAAATTGTATGAATATTTTGTATTTTTGATGTAAAGAAAGGGTTTAGAAATAGCAGAGCAGTTAGCAGATATTTTAGGATGTTTGTACATTTCTGAATTTTGCTCACCTGCACATGCAAATACTCTTTGATTTGTTACTTCTTAAAATTGGGAAATTGACAAGGTTTTCCACATGGTACAACACACGGCATGGAGTTTGGGCTGAAACAGCCCGTCATGTATCTAAGAATGTGAGAGCCGCTTTAATATAGAACTTTGGTTGGGTATGTCCGCTAGCTAGCCCTTTCAGTATTTGCGAGTTGCACACTTGTTCTGAATATAGCTCACCTGCACATCCATATACTCCTTTGATTTGTTACTTCTTGAAATTGAGAAATTGACAAGGTTTTCTACATGGTACACATGGCATGAAGTTTGGGCTGACACGGCCCATCACGTGTCTTTAAGAATGTGAACTTCCCTTTAATATAGAACTTTGTCTGGTATGTCTGTTAGCTAGCCCTTTCAGCATTTGCGAGTTGCACAGTTTTGTTCTGAATTCTGCTCACCTGCACATGCAAATATGCTTTGATTAGTTACTTCTTGAAATTGAGAAATTGACAAGGTTTTCCACATGATACACATGACATGAAGTTTTTTAGCTTGTCACTTGTCTAAGAATGTGAATGTGTCTCTTTAATATAGAACTTTGTCTTGTGTATCTGCTAGCTATCCCTTTCAACATTTGTGAGTTGCACACTTCTGTTCTGAATTTTGCTCACCTGCACATGCAAATACTCTTTGATTTGTTACTTCTTGAAATTGAGAAATTGACAAGATTTTTCACATGGTACACATGGCACTAATTTTGGGCTAAAACATCTGGTCATGTTACAAGAATGTGAAATGTCGCTTTAATATAGAACTTTGTCTGGTATGTCTGCTAGCTAGCCCTTTCAGCATTTGCATGTTGCACACTTCTGTTCTAAATTTCGCTCACCTGCACATGCAAATACTGGTTGATTTGTTACTTCTTGAAATTTAGAAATTTACAAGGTTTTCACATGGTACATATTTCATGAAGTATGGGCTGATACAGCCCGTCATGTGTCTAAGAATGTGAACGTCCCTTTAGTATAGAACTTTATCTGGTATGTCTGCTAGTTAGCCCTCCCCCATTTTCCTTCTTGAATGCCTCTCCTCATCCTAAAATGGAGACAAGAACACCAACTTGAATTTTCTTTACTTTAGTAGTCTTTTTTTTTCTTCATCTTGTTTGTGTTCATCTCTTGCTTGTTGCTCTTTTTGATAAGGTAATGTTTTAATTAATGATTGGAGAAATCCCATATACAAGCCATACACCAAAAAATAAAGAATGTAAACCAAAATATTGTTCTCTACGAAAGGAAAACCAATCATCTATAAAACAGGCACCTTATGGGTGGTGTCATCTTATTTGTATTCACGTCTTTGCTTGTTGCTTATGTAGTTTATACAATTGTTGTTTATGTTTTGATGCATCATTTCACTTCTTGTGGCTCTAATGATGCACTTGATTATATTGAACTAACAGGTTGGAGCAAAAGATCACCAGCGTTTCCAAGCATCTTATGCAATTTTGCTGAAGGCCCGGTTGACTGCACTAAAGAAGAGGGAGAGGAAGGACAAGAGGAAGGCTACTGATTCTGACAAAAAGATGGATATTTCGAAAAAGAAATCTGCTGCTGCTAAAGCCTCTACATGAAACTTTAGTCCTTTGGTTTATTCCCCCATTTTGTTTCTAGGATAGAGTTGTAGGATTTGAACCCCATCCATTTGGGGCGACAAGTCTGAAACTTCATTACAACTCCACTGCATAGAATGAAGAAAGGAGGTGTTTTTACTCAATTTGATTA</genome_strand>
        <mrna_strand>GAAGTTTTGGTTTTTGAGTTTTGAGATTTGCTGTTCGAAGATG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCGATTACAGCCAGACCCATTCCTCAATGAACTGACGAGTATGTTTGAGCGAACTACTGAGCATGGTTCCGTTTGGGTTACGCTTAAACACT............................................................................................CTTCTGATAAATCTAAAGCCCAACGGAATAAGATGAAGACAGCTGGTGAAACTCTTGAATTTAAGTGCCTCATCCGAGCAACTGATGGGAAAAAGAATATTTCCACAATG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGGAGCAAAAGATCACCAGCGTTTCCAAGCATCTTATGCAATTTTGCTGAAGGCCCGGTTGACTGCACTAAAGAAGAGGGAGAGGAAGGACAAGAGGAAGGCTACTGATTCTGACAAAAAGATGGATATTTCGAAAAAGAAATCTGCTGCTGCTAAAGCCTCTACATGAAACTTTAGTCCTTTGGTTTATTCCCCCATTTTGTTTCTAGGATAGAGTTGTANGATTTGAACCCCATCCATTTGGGGCGACAAGTCTGAAACTTCATTACAACTCCACTGCATAGAATGAAGAAAAGGAGTGTTTTTACTCAATTTGATTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E418034" ref_strand="-" ref_description="SGN-E418034 [STM-26-D10]">
      <seq>gctgttttgagttttggcttcgaagatggtgcgattacagccagacccatccctcaatgaactgacgagtatgtttgagcgaactactgaacatggttccgtttgggttacgctcaaacactcttctgataaatctaaagcccaacggaataagatgaagacagctggtgaaaatcttgaatttaagtgcctcatccgagcaactgatgggaaaaagaatatttccacaatggttggtgcaaaagatcaccagcgtttccaagcatcttatgcaattttgctgaaggcccggttgactgcactaaagaagagggagaggaaggacaagaggaaggctactgattctgacaaaaagatggatatttcgaaaaagaaatctgctgctgctaaagcctctacatgaactttagtcctttggttcatttcccccattttgtttctaggatagagttgtaggatttgaaccccgtccgtttggggcgacaagtctgaaactgcattacaacttctgctgcatagaatgaagaaaggaggtgtttttactcaatttgattattcacatctaaattagtcaaactttctaaagagcttgttgggttatggaacatgtgaagaaattttgtcatgccctcatttattgacn</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0167M06.1" temp_strand="+" temp_description="C06HBa0167M06.1  AC211057.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0167M06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="74524" stop="83181"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="74825" g_stop="74918" g_length="94"/>
          <reference_exon_boundary r_type="cDNA" r_start="29" r_stop="122" r_length="94" r_score="0.968"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="74919" i_stop="75010" i_length="92">
            <donor d_prob="0.958" d_score="0.96"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="75011" g_stop="75120" g_length="110"/>
          <reference_exon_boundary r_type="cDNA" r_start="123" r_stop="232" r_length="110" r_score="0.991"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="75121" i_stop="82488" i_length="7368">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="82489" g_stop="82899" g_length="411"/>
          <reference_exon_boundary r_type="cDNA" r_start="233" r_stop="643" r_length="411" r_score="0.937"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0167M06.1" gen_strand="+" ref_id="SGN-E418034" ref_strand="-">
        <total_alignment_score>0.951</total_alignment_score>
        <cumulative_length_of_scored_exons>615</cumulative_length_of_scored_exons>
        <coverage percentage="0.956" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0167M06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E418034" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="74825" e_stop="74918"/>
          <exon e_start="75011" e_stop="75120"/>
          <exon e_start="82489" e_stop="82899"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGCGATTACAGCCAGACCCATTCCTCAATGAACTGACGAGTATGTTTGAGCGAACTACTGAGCATGGTTCCGTTTGGGTTACGCTTAAACACTGTGAGTTTGCCTCTTCGTTGGTTTTCCTGTGTTTTGTGCTTTGTATTCTCTTTATGAGTAATACTGATTGAGCAATCTTGTCCTTTGTATAGCTTCTGATAAATCTAAAGCCCAACGGAATAAGATGAAGACAGCTGGTGAAACTCTTGAATTTAAGTGCCTCATCCGAGCAACTGATGGGAAAAAGAATATTTCCACAATGGTAATTATCACAATAGAAAGTCTCTTACCTTTTTCCATCACCTTCTTTTTGCAAGTCTTGTCGTTTTCCCCATTTTTTTGCTTTGTTGGGCACTATGTTCTCTGGAACATTGAGGGTGTTAGTTTGTTGTATGAATTATTTTTTAGCATAAGTTTAAATGTGCAAATATAGATAATTCTAGGTCCTGGCCTGTATGTTTGAGATTGAGAGCATCAAATTCAAAAAAAGGATGGTAGCCTTGTGGTGCATAGAGAATGGGAGTCGTGGTCCTTGTTTACTTGATTGATAACTAATAGGTATCGTACATGCTTGTAATACAATATTAGAGCACATAAAGGGACAATTTCTCATAAAAGGCAAACAAATTATGGATGCAACTCTTTTAGTCAGTGAACCTGTGGATTCTAGACTCGAAGGTGAAGATCCAGGGATCATGTGAAACCTAGCTATAGAGAACCCATTATGATCATGTCAACTGGGAGTTACTTCTCAACCTTCTTTAAAAAATGGGTTTTGGTGGAAGATGGTTAAAGTGGATGGTTTTTGTATCAATACTGTCCTGAATTCTAGTCATAGGAGAAATTGCTGGAATTTTCCCTCAGAGAAAGAGGACTCGGGGAGACCCCCCTCTCTTTGCCTTTTCATATTAGCTATGGAAGGTTTCAGTAGTATGATGAGAGGTACTATTCAGAACAGTGGATAAAAGGTTTCAGGATAGGCAATCAAGCAGGGGAAGAGATGTAGATTTCCTTTCATTATTGCTGATGATATAGTTGTTTTCTAAGATGCTAAAGCAGATCAGATCATGTACATCAGAATGATTTTGGTGATCTTTGGGCAATTTTTGGTCCATTTGTAAAATTGGAGGAAAGGTAGTAGTTTCCCTGTCAAAGAAGTTCCACAAATTCAATGCCTGTCCATGTTATAAGTTTCGATGATTTAACAAACTATGACATCTAGTTGGGGACCTGATCCCATGAGGGACTGAGAGTTTCAGGCAATGTGCAAAGGACAGTTGTAAAGCTGCAACTGCTGCCACAATTGCAGTGGTTGGTGCACCTTTTCAGAGGAATAGTACTCAGCCAATGGCGTTGCACTAGGTAGTTTGTCCATCTTATAATAGTCATCTTGTCAAGGGACGTTTCCTAATTTTTGAGTTGAAGATTTCCATACGGCAAAATCCACTCTCAAAAAGAAATATTCTCATATGCATCAAGAGATCTGATCGAGTGATCTACTGTTCCCTTTAGTTGTTATTTTAGTTTATCGTCTCGTGTTTATACAGTGTAAGATCTGTTCATATGTTATAAAGGAATCAGATCATTTCAGTTGTAATCGTTGTTAAAAGTTTGAGTTGTAGCTAGAGTTAGCTATGTCGTGTTCTTGAAGTCTACATTAACTTAGCTTGTTGGCGTAGTAGGCAATAGAGGTATTACTTTGTTTATGAGTAACAAAGCTGTTACGAAAGGAGAAGGGATTAAGAGTTCATTTCCTAGGTTGCAAGAGTTTGTAATCGGGATCTTAACTCTTTGAAGTAATGGAATTGGCGAAATCCTGTGAGACAGGTTGTGATTTTCTCCTTCCTTAAGCAAGGGGGTTAACACGTAAACATTTTGTGTTCTTTATTTTAAGTTTTTCTTTCTGCACTGTTCTTACTATGTGAACGGACTTGGTCCATTGACTTGTGGTGGACGCATGTAAGTCATCAGTCCAACATCTTGAGTTGTAAAATTGAGAATTTCCCGACCAACTTACTTGGGGATGCCCCTTGGAAACAATCATAAGGAGCTAGAAGTTTGGGATGAGATTATTGAAAAAATTAGTAACCAAACTCAAAATGTGTTGAGCGCTCGACTTGCTTTATGTGCGCTTCGGTGTCGTCACCAGTGTTCTAAGACATATTTTTCCTTGCCAATGTGTCTCTGCCGAAGAGGTGACACTAAACAATTGATATTTCACTTAATCACATTTTTTTTGAAAAGGTACTTTATCATTATTTTTTTCGATTTCTTCAGTCATATATTTGTTATTTGTGTTTATAATTATTCGTCTTGGACTCAGCATATATATTTGTAATTTTTTCTCCCTTTGTGCCTTTTTTCATTAAAGCCCATTCTTTGTTTGCACATAAAGGTCCAATGGGCCTTAGAGTTTTTTTGCGCTTTTCGCGTTTGATAACACTTGAAAAACTAGCCAATTGGAAAGCCCGATGTTTATCTCTTGGAGGAAGTAGTACTCTTATGAACTCAGTATTGGACTCATTGCCAACACATGTCATGTCCTTATTTCTAATGCCTTCAGGTGGAGGATACCATACAAGTTGAGGACTTTCTATGTTAGGTAATAAGGAGGGCAGAGGTATTCACTAAGTGAAATGCCAAACTGCTCAGCTTATGGTTGACTTGGTATTAGGAATCTGGGGCTTCAAAACAGATGCTTATTGACAAAATGGAGGTTTGTTGGTGAGGATCATGCACTCTGGAAGGAAGTAACTATAAAAATATGGGCAGAGTAACTATTTGTGTTCTAATATGGTCTATGTTGGCTGGGAATATAGACTGTAGTGTGTGGAATGACACCTAGATCCTTTTTCCGAGAGATAAATGGATTGGACTCGAGCCTTTAATGAGCTCATTTTCGGAACTGTTCTCATTTTGTAGCAACTCTGAAGCATCAATAGTTGACACTCTGGGTGTGTTTGTGTCACGACCCAAACCGGGTTGCGACTGGCACCCACACTTACCCTCCTATGTGAGCGAACCAACCAATCTAAACCTTAACATTTCAATGTAATAACAGTAGAAAATAATGCGGAAGACTTAACTCATTAATAAAATCAATTCAATAACTATCAATATTCAACATCTATTATTCCCAAAACCTGGAAGTCATCATCACAAGAACATCTACGATCAAATGACTAAACTAAGAGTATTCTAAAAGCTAAAAATACATAAGAAGCTAGTCCATGCCGGAAGTTCAAGGCATCAAGACTTGAAGAAGAAGATCCAGTCCAAGCTAGAAGCATTAGCTCACCCTGAATTTCCGATGTAGTAAGACTGGCTTGAATTACTGTTGAGTTGAAGACGATGGCACGTTTGCTGCACTCCACAAATAAACAAGAAGAAAACATAAAAGTAGGGGTCAGTACAAAACACGGGTACTGAGTAGATATCATCGGCCAACTCAAAATAGGGAACAGTATATATCAATATTATCGTAAATCAACTATAAAACTCAACATGTAGCCACAACAAGTATTATAATCATCAATAAGTACCATCAAGTTCATCCATGAGGGCTCAAGCCTCAACACCATACTCATTTGGGAATTATGTTCGTTAGATTGAGTATATTAACATCTTTCAAGATTCATTATCTTTAATTCTCTTGTGTCGGTACGTGACACTCCGATCCCTCATATTCATTATTCCTCTTGTGTCGGTACGTGACACTCTGATCCCCTATATCTACGTGTCGGTTCGTGACACCCGATCCCCTACATCATTCTGTAAATCATCAGGCCTTCTCTATACCAAGGTATCATCAATCCTATTACTTTAATTCATCAAGCCTTCTTCTATACCAAGGCATCATCATTAATAATGTATATTAAAGTTTCCTTTCAAGATTTGGGATTCAATATTTTCATCATGCTTATCTTATCACAATCACATAATCATATTCACGCAAACATACAATTAAGCTTATAGTAGGGTTTACAATACTACCAATACATATCATTCTCTATTAAGAGTTTACTATGAAAGCATGAAAACCATAACCTACCTCCACCGAAGAGTTGAATCAAGCAAGAATTTTCCCAAAGCTTTGTTTCTCCCTTCTCGTTCGATTTTCTCTCTCTCTCTTGTTCTTTCTATTTTCTTTATTCAAACCCTCTTTCTTTTACCCTAATTAGTATATAATTAAGAATAAAAGATGGCAATAATACCCCACTAATTAACTTAGGGTTACCTCTTTTAACCCCTCAAGAATTTGAGTTATTAATATAACCCCACGAACTTTATAATTAAGGCAAGAATAGTCAAAAACGTCCCTTAAAACTTAACCAGAAATCCGACTCTGCCTGGGATTTGCGCAACCTGTGACGGGCCGTCGTGCCTGCGACGGTCCGTCCTGCAGGTCGTCGCAGAGTTCAGAGACCCAAATTTCCACCAAGGGTCTGTGACGGTCCGTCACACCTGTGACGGTCCGTCCTGCCATTCCGTCACAAAGTTCAGAGAGTCGATTTTTAGTACCCAATTTCAGATTTTCTAAGTGTTTTGAAACGAGACCCTGCGACGGTCCCTCGTGCCCTTGACGGTCCGTCGTGGGGTCCGTCGCTTCTGCCAGTTTTTCCAGAATTGAAGTCTGTTGCTCAAAACGACTAAACGGGTCGTTACAGTTTGGTATGGAGGAAAATGTTTTCCATGGAAAATGTTTTCCTAGAAAATGTTTTCCTGGAAAACAAGTAAATTTTGGACTTATTTTCTCATGTTTGGTTGGTGAGTAGAAAATATTTTCTGGATATGATTTTTAGTGTTTGATTTATGAATGAAAAATGTTTTTGAGAGACATTTTTTATTTTTACTAGAGTAAAAAATAATTTATGATATTGAAAATATTTTTCAAAATCAAAATTATTATTTTTTTGGGTGGTGGTGGGGGTGGGGTGGGGGCAGGGCGGGGGGAGGGGGAGGGGATAGGAGTGAAAAAATAAAAATTTGAATTTGATAGTATTTTTAAAAAACAAAATTAATTTTTTTGGGGATTGGGGTGGGTGGGGGCTGGTAGGGGGGCTGGCCGGGAGTGGGGGGGAGGGGTAGGAGTTAAAAAATAAAAAATTTGAAGTTGAAAATATTTTTAAAAAGCAAAATTAATTTTTTGAGGAGGGGTTGGGGTTGGGGTTGGGGGGGGCTGGCCGGGGGTTAGGGTCAAGGATCTGGTGAAAAAATAAAATTTTGAAATTGAAAATATTTATTTAAATTGATGATTTTCCCAAAAAAAAGTAATTTGAAATTGGAGGTGAGTTATGGAAAATGTTTTCCTTAATTTTTGAAGGGAAGTCATTTTCCTTAATTTTGAGGAAAATGAGTTGATTTGGAAATCATTTTCCGAAACTTTTGTCCCAACCAAACATGTGGAAATTGGAAAACATTTTCCAGAAAATGTTTTCCTTCATACCAAACACACTCTCTGTCCCCTCAAGGTGGAATCTCACATTCAGAAGGCACTTGAATGATTGAGAAGTGGGTAGATTTGTTGAGTTATTACAAGTGCTTAGTGGTTTCTTAGGTTTATCTACAGGATCAGACACAATGAGGTGGGAACATGACAGTGATGACTAGTTCTTATTAAGAAGACTCTAGAGAAATGAAGTGGTGGAGCAACCAGGAAGGAGGGGACATACCAGGTCCTTGGAAACAGATTTGGAAGTGCAGTGTCCCAAACAAGGTGCACTTGGTTGGTGACCTGAAGAGCATGTCTCACTGATGAAAAATTGGAAAGGAGGGGCTTTCAGATGGTATCCAGATGTTTTGTTTTTGGGCTAGGAGAATGAAGAAACTAATAATCATCTTTTCTTCATTGGAAGATTGTATCACAGATCTGGTCTGTGTTTCCAAGTATATCTCGAGCAAATTGGGTAACGCCTGAACACATTGCTGACCTACTTAGCTGATGCATAAGGAGTGGAGGGAGGGAACAGAGTCAGAAGGGACGGTAAGATAATACCATATTGCATATAGTGGTCAGTATGGAGAGAAGAAACAACAGATGCTTTGAGGATATCTCTAACCCAATCTAGATAATCAAAGAAAATTGTATGAATATTTTGTATTTTTGATGTAAAGAAAGGGTTTAGAAATAGCAGAGCAGTTAGCAGATATTTTAGGATGTTTGTACATTTCTGAATTTTGCTCACCTGCACATGCAAATACTCTTTGATTTGTTACTTCTTAAAATTGGGAAATTGACAAGGTTTTCCACATGGTACAACACACGGCATGGAGTTTGGGCTGAAACAGCCCGTCATGTATCTAAGAATGTGAGAGCCGCTTTAATATAGAACTTTGGTTGGGTATGTCCGCTAGCTAGCCCTTTCAGTATTTGCGAGTTGCACACTTGTTCTGAATATAGCTCACCTGCACATCCATATACTCCTTTGATTTGTTACTTCTTGAAATTGAGAAATTGACAAGGTTTTCTACATGGTACACATGGCATGAAGTTTGGGCTGACACGGCCCATCACGTGTCTTTAAGAATGTGAACTTCCCTTTAATATAGAACTTTGTCTGGTATGTCTGTTAGCTAGCCCTTTCAGCATTTGCGAGTTGCACAGTTTTGTTCTGAATTCTGCTCACCTGCACATGCAAATATGCTTTGATTAGTTACTTCTTGAAATTGAGAAATTGACAAGGTTTTCCACATGATACACATGACATGAAGTTTTTTAGCTTGTCACTTGTCTAAGAATGTGAATGTGTCTCTTTAATATAGAACTTTGTCTTGTGTATCTGCTAGCTATCCCTTTCAACATTTGTGAGTTGCACACTTCTGTTCTGAATTTTGCTCACCTGCACATGCAAATACTCTTTGATTTGTTACTTCTTGAAATTGAGAAATTGACAAGATTTTTCACATGGTACACATGGCACTAATTTTGGGCTAAAACATCTGGTCATGTTACAAGAATGTGAAATGTCGCTTTAATATAGAACTTTGTCTGGTATGTCTGCTAGCTAGCCCTTTCAGCATTTGCATGTTGCACACTTCTGTTCTAAATTTCGCTCACCTGCACATGCAAATACTGGTTGATTTGTTACTTCTTGAAATTTAGAAATTTACAAGGTTTTCACATGGTACATATTTCATGAAGTATGGGCTGATACAGCCCGTCATGTGTCTAAGAATGTGAACGTCCCTTTAGTATAGAACTTTATCTGGTATGTCTGCTAGTTAGCCCTCCCCCATTTTCCTTCTTGAATGCCTCTCCTCATCCTAAAATGGAGACAAGAACACCAACTTGAATTTTCTTTACTTTAGTAGTCTTTTTTTTTCTTCATCTTGTTTGTGTTCATCTCTTGCTTGTTGCTCTTTTTGATAAGGTAATGTTTTAATTAATGATTGGAGAAATCCCATATACAAGCCATACACCAAAAAATAAAGAATGTAAACCAAAATATTGTTCTCTACGAAAGGAAAACCAATCATCTATAAAACAGGCACCTTATGGGTGGTGTCATCTTATTTGTATTCACGTCTTTGCTTGTTGCTTATGTAGTTTATACAATTGTTGTTTATGTTTTGATGCATCATTTCACTTCTTGTGGCTCTAATGATGCACTTGATTATATTGAACTAACAGGTTGGAGCAAAAGATCACCAGCGTTTCCAAGCATCTTATGCAATTTTGCTGAAGGCCCGGTTGACTGCACTAAAGAAGAGGGAGAGGAAGGACAAGAGGAAGGCTACTGATTCTGACAAAAAGATGGATATTTCGAAAAAGAAATCTGCTGCTGCTAAAGCCTCTACATGAAACTTTAGTCCTTTGGTTTA-TTCCCCCATTTTGTTTCTAGGATAGAGTTGTAGGATTTGAACCCCATCCATTTGGGGCGACAAGTCTGAAACTTCATTACAAC-TCCACTGCATAGAATGAAGAAAGGAGGTGTTTTTACTCAATTTGATTATTCACATCTAAATTAGTCAAACTTTTTAAAGAGCTTGTTGGGTTATGGAACAGTTGAAGGAATTTTGTCATAATCTTGATCTTTTAATT</genome_strand>
        <mrna_strand>GTGCGATTACAGCCAGACCCATCCCTCAATGAACTGACGAGTATGTTTGAGCGAACTACTGAACATGGTTCCGTTTGGGTTACGCTCAAACACT............................................................................................CTTCTGATAAATCTAAAGCCCAACGGAATAAGATGAAGACAGCTGGTGAAAATCTTGAATTTAAGTGCCTCATCCGAGCAACTGATGGGAAAAAGAATATTTCCACAATG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGGTGCAAAAGATCACCAGCGTTTCCAAGCATCTTATGCAATTTTGCTGAAGGCCCGGTTGACTGCACTAAAGAAGAGGGAGAGGAAGGACAAGAGGAAGGCTACTGATTCTGACAAAAAGATGGATATTTCGAAAAAGAAATCTGCTGCTGCTAAAGCCTCTACATG-AACTTTAGTCCTTTGGTTCATTTCCCCCATTTTGTTTCTAGGATAGAGTTGTAGGATTTGAACCCCGTCCGTTTGGGGCGACAAGTCTGAAACTGCATTACAACTTCTGCTGCATAGAATGAAGAAAGGAGGTGTTTTTACTCAATTTGATTATTCACATCTAAATTAGTCAAACTTTCTAAAGAGCTTGTTGGGTTATGGAACATGTGAAGAAATTTTGTCAT-GCCCTCATTTATTGACN</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E418033" ref_strand="+" ref_description="SGN-E418033 [STM-26-D10]">
      <seq>gctgttttgagttttggcttcgaagatggtgcgattacagccagacccattcctcaatgaactgacgagtatgtttgagcgaactactgaacatggttccgtttgggttacgctcaaacactcttctgataaatctaaagcccaacggaataagatgaagacagctggtgaaaatcttgaatttaagtgcctcatccgagcaactgatgggaaaaagaatatttccacaatggttggtgcaaaagatcaccagcgtttccaagcatcttatgcaattttgctgaaggcccggttgactgcactaaagaagagggagaggaaggacaagaggaaggctactgattctgacaaaaagatggatatttcgaaaaagaaatctgctgctgctaaagcctctacatgaactttagtcctttggttcatttcccccattttgtttctaggatagagttgtaggatttgaaccccgtccgtttggggcgacaagtctgaaactgcattacaacttctgctgcatagaatgaagaaaggaggtgtttttactcaatttgattattcacatctaaattagtcaaactttctaaagagcttgttgggttatggaacatttgaagaaattttgtcatgaaataaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0167M06.1" temp_strand="+" temp_description="C06HBa0167M06.1  AC211057.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0167M06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="74524" stop="83183"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="74825" g_stop="74918" g_length="94"/>
          <reference_exon_boundary r_type="cDNA" r_start="29" r_stop="122" r_length="94" r_score="0.979"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="74919" i_stop="75010" i_length="92">
            <donor d_prob="0.958" d_score="0.96"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="75011" g_stop="75120" g_length="110"/>
          <reference_exon_boundary r_type="cDNA" r_start="123" r_stop="232" r_length="110" r_score="0.991"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="75121" i_stop="82488" i_length="7368">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="82489" g_stop="82879" g_length="391"/>
          <reference_exon_boundary r_type="cDNA" r_start="233" r_stop="624" r_length="392" r_score="0.962"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="628" polyA_stop="640"/>
      <MATCH_line gen_id="C06HBa0167M06.1" gen_strand="+" ref_id="SGN-E418033" ref_strand="+">
        <total_alignment_score>0.970</total_alignment_score>
        <cumulative_length_of_scored_exons>595</cumulative_length_of_scored_exons>
        <coverage percentage="0.930" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0167M06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E418033" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="74825" e_stop="74918"/>
          <exon e_start="75011" e_stop="75120"/>
          <exon e_start="82489" e_stop="82879"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGCGATTACAGCCAGACCCATTCCTCAATGAACTGACGAGTATGTTTGAGCGAACTACTGAGCATGGTTCCGTTTGGGTTACGCTTAAACACTGTGAGTTTGCCTCTTCGTTGGTTTTCCTGTGTTTTGTGCTTTGTATTCTCTTTATGAGTAATACTGATTGAGCAATCTTGTCCTTTGTATAGCTTCTGATAAATCTAAAGCCCAACGGAATAAGATGAAGACAGCTGGTGAAACTCTTGAATTTAAGTGCCTCATCCGAGCAACTGATGGGAAAAAGAATATTTCCACAATGGTAATTATCACAATAGAAAGTCTCTTACCTTTTTCCATCACCTTCTTTTTGCAAGTCTTGTCGTTTTCCCCATTTTTTTGCTTTGTTGGGCACTATGTTCTCTGGAACATTGAGGGTGTTAGTTTGTTGTATGAATTATTTTTTAGCATAAGTTTAAATGTGCAAATATAGATAATTCTAGGTCCTGGCCTGTATGTTTGAGATTGAGAGCATCAAATTCAAAAAAAGGATGGTAGCCTTGTGGTGCATAGAGAATGGGAGTCGTGGTCCTTGTTTACTTGATTGATAACTAATAGGTATCGTACATGCTTGTAATACAATATTAGAGCACATAAAGGGACAATTTCTCATAAAAGGCAAACAAATTATGGATGCAACTCTTTTAGTCAGTGAACCTGTGGATTCTAGACTCGAAGGTGAAGATCCAGGGATCATGTGAAACCTAGCTATAGAGAACCCATTATGATCATGTCAACTGGGAGTTACTTCTCAACCTTCTTTAAAAAATGGGTTTTGGTGGAAGATGGTTAAAGTGGATGGTTTTTGTATCAATACTGTCCTGAATTCTAGTCATAGGAGAAATTGCTGGAATTTTCCCTCAGAGAAAGAGGACTCGGGGAGACCCCCCTCTCTTTGCCTTTTCATATTAGCTATGGAAGGTTTCAGTAGTATGATGAGAGGTACTATTCAGAACAGTGGATAAAAGGTTTCAGGATAGGCAATCAAGCAGGGGAAGAGATGTAGATTTCCTTTCATTATTGCTGATGATATAGTTGTTTTCTAAGATGCTAAAGCAGATCAGATCATGTACATCAGAATGATTTTGGTGATCTTTGGGCAATTTTTGGTCCATTTGTAAAATTGGAGGAAAGGTAGTAGTTTCCCTGTCAAAGAAGTTCCACAAATTCAATGCCTGTCCATGTTATAAGTTTCGATGATTTAACAAACTATGACATCTAGTTGGGGACCTGATCCCATGAGGGACTGAGAGTTTCAGGCAATGTGCAAAGGACAGTTGTAAAGCTGCAACTGCTGCCACAATTGCAGTGGTTGGTGCACCTTTTCAGAGGAATAGTACTCAGCCAATGGCGTTGCACTAGGTAGTTTGTCCATCTTATAATAGTCATCTTGTCAAGGGACGTTTCCTAATTTTTGAGTTGAAGATTTCCATACGGCAAAATCCACTCTCAAAAAGAAATATTCTCATATGCATCAAGAGATCTGATCGAGTGATCTACTGTTCCCTTTAGTTGTTATTTTAGTTTATCGTCTCGTGTTTATACAGTGTAAGATCTGTTCATATGTTATAAAGGAATCAGATCATTTCAGTTGTAATCGTTGTTAAAAGTTTGAGTTGTAGCTAGAGTTAGCTATGTCGTGTTCTTGAAGTCTACATTAACTTAGCTTGTTGGCGTAGTAGGCAATAGAGGTATTACTTTGTTTATGAGTAACAAAGCTGTTACGAAAGGAGAAGGGATTAAGAGTTCATTTCCTAGGTTGCAAGAGTTTGTAATCGGGATCTTAACTCTTTGAAGTAATGGAATTGGCGAAATCCTGTGAGACAGGTTGTGATTTTCTCCTTCCTTAAGCAAGGGGGTTAACACGTAAACATTTTGTGTTCTTTATTTTAAGTTTTTCTTTCTGCACTGTTCTTACTATGTGAACGGACTTGGTCCATTGACTTGTGGTGGACGCATGTAAGTCATCAGTCCAACATCTTGAGTTGTAAAATTGAGAATTTCCCGACCAACTTACTTGGGGATGCCCCTTGGAAACAATCATAAGGAGCTAGAAGTTTGGGATGAGATTATTGAAAAAATTAGTAACCAAACTCAAAATGTGTTGAGCGCTCGACTTGCTTTATGTGCGCTTCGGTGTCGTCACCAGTGTTCTAAGACATATTTTTCCTTGCCAATGTGTCTCTGCCGAAGAGGTGACACTAAACAATTGATATTTCACTTAATCACATTTTTTTTGAAAAGGTACTTTATCATTATTTTTTTCGATTTCTTCAGTCATATATTTGTTATTTGTGTTTATAATTATTCGTCTTGGACTCAGCATATATATTTGTAATTTTTTCTCCCTTTGTGCCTTTTTTCATTAAAGCCCATTCTTTGTTTGCACATAAAGGTCCAATGGGCCTTAGAGTTTTTTTGCGCTTTTCGCGTTTGATAACACTTGAAAAACTAGCCAATTGGAAAGCCCGATGTTTATCTCTTGGAGGAAGTAGTACTCTTATGAACTCAGTATTGGACTCATTGCCAACACATGTCATGTCCTTATTTCTAATGCCTTCAGGTGGAGGATACCATACAAGTTGAGGACTTTCTATGTTAGGTAATAAGGAGGGCAGAGGTATTCACTAAGTGAAATGCCAAACTGCTCAGCTTATGGTTGACTTGGTATTAGGAATCTGGGGCTTCAAAACAGATGCTTATTGACAAAATGGAGGTTTGTTGGTGAGGATCATGCACTCTGGAAGGAAGTAACTATAAAAATATGGGCAGAGTAACTATTTGTGTTCTAATATGGTCTATGTTGGCTGGGAATATAGACTGTAGTGTGTGGAATGACACCTAGATCCTTTTTCCGAGAGATAAATGGATTGGACTCGAGCCTTTAATGAGCTCATTTTCGGAACTGTTCTCATTTTGTAGCAACTCTGAAGCATCAATAGTTGACACTCTGGGTGTGTTTGTGTCACGACCCAAACCGGGTTGCGACTGGCACCCACACTTACCCTCCTATGTGAGCGAACCAACCAATCTAAACCTTAACATTTCAATGTAATAACAGTAGAAAATAATGCGGAAGACTTAACTCATTAATAAAATCAATTCAATAACTATCAATATTCAACATCTATTATTCCCAAAACCTGGAAGTCATCATCACAAGAACATCTACGATCAAATGACTAAACTAAGAGTATTCTAAAAGCTAAAAATACATAAGAAGCTAGTCCATGCCGGAAGTTCAAGGCATCAAGACTTGAAGAAGAAGATCCAGTCCAAGCTAGAAGCATTAGCTCACCCTGAATTTCCGATGTAGTAAGACTGGCTTGAATTACTGTTGAGTTGAAGACGATGGCACGTTTGCTGCACTCCACAAATAAACAAGAAGAAAACATAAAAGTAGGGGTCAGTACAAAACACGGGTACTGAGTAGATATCATCGGCCAACTCAAAATAGGGAACAGTATATATCAATATTATCGTAAATCAACTATAAAACTCAACATGTAGCCACAACAAGTATTATAATCATCAATAAGTACCATCAAGTTCATCCATGAGGGCTCAAGCCTCAACACCATACTCATTTGGGAATTATGTTCGTTAGATTGAGTATATTAACATCTTTCAAGATTCATTATCTTTAATTCTCTTGTGTCGGTACGTGACACTCCGATCCCTCATATTCATTATTCCTCTTGTGTCGGTACGTGACACTCTGATCCCCTATATCTACGTGTCGGTTCGTGACACCCGATCCCCTACATCATTCTGTAAATCATCAGGCCTTCTCTATACCAAGGTATCATCAATCCTATTACTTTAATTCATCAAGCCTTCTTCTATACCAAGGCATCATCATTAATAATGTATATTAAAGTTTCCTTTCAAGATTTGGGATTCAATATTTTCATCATGCTTATCTTATCACAATCACATAATCATATTCACGCAAACATACAATTAAGCTTATAGTAGGGTTTACAATACTACCAATACATATCATTCTCTATTAAGAGTTTACTATGAAAGCATGAAAACCATAACCTACCTCCACCGAAGAGTTGAATCAAGCAAGAATTTTCCCAAAGCTTTGTTTCTCCCTTCTCGTTCGATTTTCTCTCTCTCTCTTGTTCTTTCTATTTTCTTTATTCAAACCCTCTTTCTTTTACCCTAATTAGTATATAATTAAGAATAAAAGATGGCAATAATACCCCACTAATTAACTTAGGGTTACCTCTTTTAACCCCTCAAGAATTTGAGTTATTAATATAACCCCACGAACTTTATAATTAAGGCAAGAATAGTCAAAAACGTCCCTTAAAACTTAACCAGAAATCCGACTCTGCCTGGGATTTGCGCAACCTGTGACGGGCCGTCGTGCCTGCGACGGTCCGTCCTGCAGGTCGTCGCAGAGTTCAGAGACCCAAATTTCCACCAAGGGTCTGTGACGGTCCGTCACACCTGTGACGGTCCGTCCTGCCATTCCGTCACAAAGTTCAGAGAGTCGATTTTTAGTACCCAATTTCAGATTTTCTAAGTGTTTTGAAACGAGACCCTGCGACGGTCCCTCGTGCCCTTGACGGTCCGTCGTGGGGTCCGTCGCTTCTGCCAGTTTTTCCAGAATTGAAGTCTGTTGCTCAAAACGACTAAACGGGTCGTTACAGTTTGGTATGGAGGAAAATGTTTTCCATGGAAAATGTTTTCCTAGAAAATGTTTTCCTGGAAAACAAGTAAATTTTGGACTTATTTTCTCATGTTTGGTTGGTGAGTAGAAAATATTTTCTGGATATGATTTTTAGTGTTTGATTTATGAATGAAAAATGTTTTTGAGAGACATTTTTTATTTTTACTAGAGTAAAAAATAATTTATGATATTGAAAATATTTTTCAAAATCAAAATTATTATTTTTTTGGGTGGTGGTGGGGGTGGGGTGGGGGCAGGGCGGGGGGAGGGGGAGGGGATAGGAGTGAAAAAATAAAAATTTGAATTTGATAGTATTTTTAAAAAACAAAATTAATTTTTTTGGGGATTGGGGTGGGTGGGGGCTGGTAGGGGGGCTGGCCGGGAGTGGGGGGGAGGGGTAGGAGTTAAAAAATAAAAAATTTGAAGTTGAAAATATTTTTAAAAAGCAAAATTAATTTTTTGAGGAGGGGTTGGGGTTGGGGTTGGGGGGGGCTGGCCGGGGGTTAGGGTCAAGGATCTGGTGAAAAAATAAAATTTTGAAATTGAAAATATTTATTTAAATTGATGATTTTCCCAAAAAAAAGTAATTTGAAATTGGAGGTGAGTTATGGAAAATGTTTTCCTTAATTTTTGAAGGGAAGTCATTTTCCTTAATTTTGAGGAAAATGAGTTGATTTGGAAATCATTTTCCGAAACTTTTGTCCCAACCAAACATGTGGAAATTGGAAAACATTTTCCAGAAAATGTTTTCCTTCATACCAAACACACTCTCTGTCCCCTCAAGGTGGAATCTCACATTCAGAAGGCACTTGAATGATTGAGAAGTGGGTAGATTTGTTGAGTTATTACAAGTGCTTAGTGGTTTCTTAGGTTTATCTACAGGATCAGACACAATGAGGTGGGAACATGACAGTGATGACTAGTTCTTATTAAGAAGACTCTAGAGAAATGAAGTGGTGGAGCAACCAGGAAGGAGGGGACATACCAGGTCCTTGGAAACAGATTTGGAAGTGCAGTGTCCCAAACAAGGTGCACTTGGTTGGTGACCTGAAGAGCATGTCTCACTGATGAAAAATTGGAAAGGAGGGGCTTTCAGATGGTATCCAGATGTTTTGTTTTTGGGCTAGGAGAATGAAGAAACTAATAATCATCTTTTCTTCATTGGAAGATTGTATCACAGATCTGGTCTGTGTTTCCAAGTATATCTCGAGCAAATTGGGTAACGCCTGAACACATTGCTGACCTACTTAGCTGATGCATAAGGAGTGGAGGGAGGGAACAGAGTCAGAAGGGACGGTAAGATAATACCATATTGCATATAGTGGTCAGTATGGAGAGAAGAAACAACAGATGCTTTGAGGATATCTCTAACCCAATCTAGATAATCAAAGAAAATTGTATGAATATTTTGTATTTTTGATGTAAAGAAAGGGTTTAGAAATAGCAGAGCAGTTAGCAGATATTTTAGGATGTTTGTACATTTCTGAATTTTGCTCACCTGCACATGCAAATACTCTTTGATTTGTTACTTCTTAAAATTGGGAAATTGACAAGGTTTTCCACATGGTACAACACACGGCATGGAGTTTGGGCTGAAACAGCCCGTCATGTATCTAAGAATGTGAGAGCCGCTTTAATATAGAACTTTGGTTGGGTATGTCCGCTAGCTAGCCCTTTCAGTATTTGCGAGTTGCACACTTGTTCTGAATATAGCTCACCTGCACATCCATATACTCCTTTGATTTGTTACTTCTTGAAATTGAGAAATTGACAAGGTTTTCTACATGGTACACATGGCATGAAGTTTGGGCTGACACGGCCCATCACGTGTCTTTAAGAATGTGAACTTCCCTTTAATATAGAACTTTGTCTGGTATGTCTGTTAGCTAGCCCTTTCAGCATTTGCGAGTTGCACAGTTTTGTTCTGAATTCTGCTCACCTGCACATGCAAATATGCTTTGATTAGTTACTTCTTGAAATTGAGAAATTGACAAGGTTTTCCACATGATACACATGACATGAAGTTTTTTAGCTTGTCACTTGTCTAAGAATGTGAATGTGTCTCTTTAATATAGAACTTTGTCTTGTGTATCTGCTAGCTATCCCTTTCAACATTTGTGAGTTGCACACTTCTGTTCTGAATTTTGCTCACCTGCACATGCAAATACTCTTTGATTTGTTACTTCTTGAAATTGAGAAATTGACAAGATTTTTCACATGGTACACATGGCACTAATTTTGGGCTAAAACATCTGGTCATGTTACAAGAATGTGAAATGTCGCTTTAATATAGAACTTTGTCTGGTATGTCTGCTAGCTAGCCCTTTCAGCATTTGCATGTTGCACACTTCTGTTCTAAATTTCGCTCACCTGCACATGCAAATACTGGTTGATTTGTTACTTCTTGAAATTTAGAAATTTACAAGGTTTTCACATGGTACATATTTCATGAAGTATGGGCTGATACAGCCCGTCATGTGTCTAAGAATGTGAACGTCCCTTTAGTATAGAACTTTATCTGGTATGTCTGCTAGTTAGCCCTCCCCCATTTTCCTTCTTGAATGCCTCTCCTCATCCTAAAATGGAGACAAGAACACCAACTTGAATTTTCTTTACTTTAGTAGTCTTTTTTTTTCTTCATCTTGTTTGTGTTCATCTCTTGCTTGTTGCTCTTTTTGATAAGGTAATGTTTTAATTAATGATTGGAGAAATCCCATATACAAGCCATACACCAAAAAATAAAGAATGTAAACCAAAATATTGTTCTCTACGAAAGGAAAACCAATCATCTATAAAACAGGCACCTTATGGGTGGTGTCATCTTATTTGTATTCACGTCTTTGCTTGTTGCTTATGTAGTTTATACAATTGTTGTTTATGTTTTGATGCATCATTTCACTTCTTGTGGCTCTAATGATGCACTTGATTATATTGAACTAACAGGTTGGAGCAAAAGATCACCAGCGTTTCCAAGCATCTTATGCAATTTTGCTGAAGGCCCGGTTGACTGCACTAAAGAAGAGGGAGAGGAAGGACAAGAGGAAGGCTACTGATTCTGACAAAAAGATGGATATTTCGAAAAAGAAATCTGCTGCTGCTAAAGCCTCTACATGAAACTTTAGTCCTTTGGTTTA-TTCCCCCATTTTGTTTCTAGGATAGAGTTGTAGGATTTGAACCCCATCCATTTGGGGCGACAAGTCTGAAACTTCATTACAAC-TCCACTGCATAGAATGAAGAAAGGAGGTGTTTTTACTCAATTTGATTATTCACATCTAAATTAGTCAAACTTTTTAAAGAGCTTGTTGGGTTATGGAACAGTTGAAGGAATTTTGTC</genome_strand>
        <mrna_strand>GTGCGATTACAGCCAGACCCATTCCTCAATGAACTGACGAGTATGTTTGAGCGAACTACTGAACATGGTTCCGTTTGGGTTACGCTCAAACACT............................................................................................CTTCTGATAAATCTAAAGCCCAACGGAATAAGATGAAGACAGCTGGTGAAAATCTTGAATTTAAGTGCCTCATCCGAGCAACTGATGGGAAAAAGAATATTTCCACAATG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGGTGCAAAAGATCACCAGCGTTTCCAAGCATCTTATGCAATTTTGCTGAAGGCCCGGTTGACTGCACTAAAGAAGAGGGAGAGGAAGGACAAGAGGAAGGCTACTGATTCTGACAAAAAGATGGATATTTCGAAAAAGAAATCTGCTGCTGCTAAAGCCTCTACATG-AACTTTAGTCCTTTGGTTCATTTCCCCCATTTTGTTTCTAGGATAGAGTTGTAGGATTTGAACCCCGTCCGTTTGGGGCGACAAGTCTGAAACTGCATTACAACTTCTGCTGCATAGAATGAAGAAAGGAGGTGTTTTTACTCAATTTGATTATTCACATCTAAATTAGTCAAACTTTCTAAAGAGCTTGTTGGGTTATGGAACATTTGAAGAAATTTTGTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E447566" ref_strand="+" ref_description="SGN-E447566 [cSTA-27-M8]">
      <seq>gctgttttgagttttggcttcgaagatggtgcgattacagccagacccattcctcaatgaactgacgagtatgtttgagcgaactactgaacatggttccgtttgggttacgctcaaacactcttctgataaatctaaagcccaacggaataagatgaagacagctggtgaaaatcttgaatttaagtgcctcatccgagcaactgatgggaaaaagaatatttccacaatggttggtgcaaaagatcaccagcgtttccaagcatcttatgcaattttgctgaaggcccggttgactgcactaaagaagagggagaggaaggacaagaggaaggctactgattctgacaaaaagatggatatttcgaaaaagaaatctgctgctgctaaagcctctacatgaactttagtcctttggttcatttcccccattttgtttctaggatagagttgtaggatttgaaccccgtccgtttggggcgacaagtctgaaactgcattacaactt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0167M06.1" temp_strand="+" temp_description="C06HBa0167M06.1  AC211057.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0167M06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="74524" stop="83063"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="74825" g_stop="74918" g_length="94"/>
          <reference_exon_boundary r_type="cDNA" r_start="29" r_stop="122" r_length="94" r_score="0.979"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="74919" i_stop="75010" i_length="92">
            <donor d_prob="0.958" d_score="0.96"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="75011" g_stop="75120" g_length="110"/>
          <reference_exon_boundary r_type="cDNA" r_start="123" r_stop="232" r_length="110" r_score="0.991"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="75121" i_stop="82488" i_length="7368">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="82489" g_stop="82764" g_length="276"/>
          <reference_exon_boundary r_type="cDNA" r_start="233" r_stop="508" r_length="276" r_score="0.967"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0167M06.1" gen_strand="+" ref_id="SGN-E447566" ref_strand="+">
        <total_alignment_score>0.975</total_alignment_score>
        <cumulative_length_of_scored_exons>480</cumulative_length_of_scored_exons>
        <coverage percentage="0.945" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0167M06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E447566" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="74825" e_stop="74918"/>
          <exon e_start="75011" e_stop="75120"/>
          <exon e_start="82489" e_stop="82764"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGCGATTACAGCCAGACCCATTCCTCAATGAACTGACGAGTATGTTTGAGCGAACTACTGAGCATGGTTCCGTTTGGGTTACGCTTAAACACTGTGAGTTTGCCTCTTCGTTGGTTTTCCTGTGTTTTGTGCTTTGTATTCTCTTTATGAGTAATACTGATTGAGCAATCTTGTCCTTTGTATAGCTTCTGATAAATCTAAAGCCCAACGGAATAAGATGAAGACAGCTGGTGAAACTCTTGAATTTAAGTGCCTCATCCGAGCAACTGATGGGAAAAAGAATATTTCCACAATGGTAATTATCACAATAGAAAGTCTCTTACCTTTTTCCATCACCTTCTTTTTGCAAGTCTTGTCGTTTTCCCCATTTTTTTGCTTTGTTGGGCACTATGTTCTCTGGAACATTGAGGGTGTTAGTTTGTTGTATGAATTATTTTTTAGCATAAGTTTAAATGTGCAAATATAGATAATTCTAGGTCCTGGCCTGTATGTTTGAGATTGAGAGCATCAAATTCAAAAAAAGGATGGTAGCCTTGTGGTGCATAGAGAATGGGAGTCGTGGTCCTTGTTTACTTGATTGATAACTAATAGGTATCGTACATGCTTGTAATACAATATTAGAGCACATAAAGGGACAATTTCTCATAAAAGGCAAACAAATTATGGATGCAACTCTTTTAGTCAGTGAACCTGTGGATTCTAGACTCGAAGGTGAAGATCCAGGGATCATGTGAAACCTAGCTATAGAGAACCCATTATGATCATGTCAACTGGGAGTTACTTCTCAACCTTCTTTAAAAAATGGGTTTTGGTGGAAGATGGTTAAAGTGGATGGTTTTTGTATCAATACTGTCCTGAATTCTAGTCATAGGAGAAATTGCTGGAATTTTCCCTCAGAGAAAGAGGACTCGGGGAGACCCCCCTCTCTTTGCCTTTTCATATTAGCTATGGAAGGTTTCAGTAGTATGATGAGAGGTACTATTCAGAACAGTGGATAAAAGGTTTCAGGATAGGCAATCAAGCAGGGGAAGAGATGTAGATTTCCTTTCATTATTGCTGATGATATAGTTGTTTTCTAAGATGCTAAAGCAGATCAGATCATGTACATCAGAATGATTTTGGTGATCTTTGGGCAATTTTTGGTCCATTTGTAAAATTGGAGGAAAGGTAGTAGTTTCCCTGTCAAAGAAGTTCCACAAATTCAATGCCTGTCCATGTTATAAGTTTCGATGATTTAACAAACTATGACATCTAGTTGGGGACCTGATCCCATGAGGGACTGAGAGTTTCAGGCAATGTGCAAAGGACAGTTGTAAAGCTGCAACTGCTGCCACAATTGCAGTGGTTGGTGCACCTTTTCAGAGGAATAGTACTCAGCCAATGGCGTTGCACTAGGTAGTTTGTCCATCTTATAATAGTCATCTTGTCAAGGGACGTTTCCTAATTTTTGAGTTGAAGATTTCCATACGGCAAAATCCACTCTCAAAAAGAAATATTCTCATATGCATCAAGAGATCTGATCGAGTGATCTACTGTTCCCTTTAGTTGTTATTTTAGTTTATCGTCTCGTGTTTATACAGTGTAAGATCTGTTCATATGTTATAAAGGAATCAGATCATTTCAGTTGTAATCGTTGTTAAAAGTTTGAGTTGTAGCTAGAGTTAGCTATGTCGTGTTCTTGAAGTCTACATTAACTTAGCTTGTTGGCGTAGTAGGCAATAGAGGTATTACTTTGTTTATGAGTAACAAAGCTGTTACGAAAGGAGAAGGGATTAAGAGTTCATTTCCTAGGTTGCAAGAGTTTGTAATCGGGATCTTAACTCTTTGAAGTAATGGAATTGGCGAAATCCTGTGAGACAGGTTGTGATTTTCTCCTTCCTTAAGCAAGGGGGTTAACACGTAAACATTTTGTGTTCTTTATTTTAAGTTTTTCTTTCTGCACTGTTCTTACTATGTGAACGGACTTGGTCCATTGACTTGTGGTGGACGCATGTAAGTCATCAGTCCAACATCTTGAGTTGTAAAATTGAGAATTTCCCGACCAACTTACTTGGGGATGCCCCTTGGAAACAATCATAAGGAGCTAGAAGTTTGGGATGAGATTATTGAAAAAATTAGTAACCAAACTCAAAATGTGTTGAGCGCTCGACTTGCTTTATGTGCGCTTCGGTGTCGTCACCAGTGTTCTAAGACATATTTTTCCTTGCCAATGTGTCTCTGCCGAAGAGGTGACACTAAACAATTGATATTTCACTTAATCACATTTTTTTTGAAAAGGTACTTTATCATTATTTTTTTCGATTTCTTCAGTCATATATTTGTTATTTGTGTTTATAATTATTCGTCTTGGACTCAGCATATATATTTGTAATTTTTTCTCCCTTTGTGCCTTTTTTCATTAAAGCCCATTCTTTGTTTGCACATAAAGGTCCAATGGGCCTTAGAGTTTTTTTGCGCTTTTCGCGTTTGATAACACTTGAAAAACTAGCCAATTGGAAAGCCCGATGTTTATCTCTTGGAGGAAGTAGTACTCTTATGAACTCAGTATTGGACTCATTGCCAACACATGTCATGTCCTTATTTCTAATGCCTTCAGGTGGAGGATACCATACAAGTTGAGGACTTTCTATGTTAGGTAATAAGGAGGGCAGAGGTATTCACTAAGTGAAATGCCAAACTGCTCAGCTTATGGTTGACTTGGTATTAGGAATCTGGGGCTTCAAAACAGATGCTTATTGACAAAATGGAGGTTTGTTGGTGAGGATCATGCACTCTGGAAGGAAGTAACTATAAAAATATGGGCAGAGTAACTATTTGTGTTCTAATATGGTCTATGTTGGCTGGGAATATAGACTGTAGTGTGTGGAATGACACCTAGATCCTTTTTCCGAGAGATAAATGGATTGGACTCGAGCCTTTAATGAGCTCATTTTCGGAACTGTTCTCATTTTGTAGCAACTCTGAAGCATCAATAGTTGACACTCTGGGTGTGTTTGTGTCACGACCCAAACCGGGTTGCGACTGGCACCCACACTTACCCTCCTATGTGAGCGAACCAACCAATCTAAACCTTAACATTTCAATGTAATAACAGTAGAAAATAATGCGGAAGACTTAACTCATTAATAAAATCAATTCAATAACTATCAATATTCAACATCTATTATTCCCAAAACCTGGAAGTCATCATCACAAGAACATCTACGATCAAATGACTAAACTAAGAGTATTCTAAAAGCTAAAAATACATAAGAAGCTAGTCCATGCCGGAAGTTCAAGGCATCAAGACTTGAAGAAGAAGATCCAGTCCAAGCTAGAAGCATTAGCTCACCCTGAATTTCCGATGTAGTAAGACTGGCTTGAATTACTGTTGAGTTGAAGACGATGGCACGTTTGCTGCACTCCACAAATAAACAAGAAGAAAACATAAAAGTAGGGGTCAGTACAAAACACGGGTACTGAGTAGATATCATCGGCCAACTCAAAATAGGGAACAGTATATATCAATATTATCGTAAATCAACTATAAAACTCAACATGTAGCCACAACAAGTATTATAATCATCAATAAGTACCATCAAGTTCATCCATGAGGGCTCAAGCCTCAACACCATACTCATTTGGGAATTATGTTCGTTAGATTGAGTATATTAACATCTTTCAAGATTCATTATCTTTAATTCTCTTGTGTCGGTACGTGACACTCCGATCCCTCATATTCATTATTCCTCTTGTGTCGGTACGTGACACTCTGATCCCCTATATCTACGTGTCGGTTCGTGACACCCGATCCCCTACATCATTCTGTAAATCATCAGGCCTTCTCTATACCAAGGTATCATCAATCCTATTACTTTAATTCATCAAGCCTTCTTCTATACCAAGGCATCATCATTAATAATGTATATTAAAGTTTCCTTTCAAGATTTGGGATTCAATATTTTCATCATGCTTATCTTATCACAATCACATAATCATATTCACGCAAACATACAATTAAGCTTATAGTAGGGTTTACAATACTACCAATACATATCATTCTCTATTAAGAGTTTACTATGAAAGCATGAAAACCATAACCTACCTCCACCGAAGAGTTGAATCAAGCAAGAATTTTCCCAAAGCTTTGTTTCTCCCTTCTCGTTCGATTTTCTCTCTCTCTCTTGTTCTTTCTATTTTCTTTATTCAAACCCTCTTTCTTTTACCCTAATTAGTATATAATTAAGAATAAAAGATGGCAATAATACCCCACTAATTAACTTAGGGTTACCTCTTTTAACCCCTCAAGAATTTGAGTTATTAATATAACCCCACGAACTTTATAATTAAGGCAAGAATAGTCAAAAACGTCCCTTAAAACTTAACCAGAAATCCGACTCTGCCTGGGATTTGCGCAACCTGTGACGGGCCGTCGTGCCTGCGACGGTCCGTCCTGCAGGTCGTCGCAGAGTTCAGAGACCCAAATTTCCACCAAGGGTCTGTGACGGTCCGTCACACCTGTGACGGTCCGTCCTGCCATTCCGTCACAAAGTTCAGAGAGTCGATTTTTAGTACCCAATTTCAGATTTTCTAAGTGTTTTGAAACGAGACCCTGCGACGGTCCCTCGTGCCCTTGACGGTCCGTCGTGGGGTCCGTCGCTTCTGCCAGTTTTTCCAGAATTGAAGTCTGTTGCTCAAAACGACTAAACGGGTCGTTACAGTTTGGTATGGAGGAAAATGTTTTCCATGGAAAATGTTTTCCTAGAAAATGTTTTCCTGGAAAACAAGTAAATTTTGGACTTATTTTCTCATGTTTGGTTGGTGAGTAGAAAATATTTTCTGGATATGATTTTTAGTGTTTGATTTATGAATGAAAAATGTTTTTGAGAGACATTTTTTATTTTTACTAGAGTAAAAAATAATTTATGATATTGAAAATATTTTTCAAAATCAAAATTATTATTTTTTTGGGTGGTGGTGGGGGTGGGGTGGGGGCAGGGCGGGGGGAGGGGGAGGGGATAGGAGTGAAAAAATAAAAATTTGAATTTGATAGTATTTTTAAAAAACAAAATTAATTTTTTTGGGGATTGGGGTGGGTGGGGGCTGGTAGGGGGGCTGGCCGGGAGTGGGGGGGAGGGGTAGGAGTTAAAAAATAAAAAATTTGAAGTTGAAAATATTTTTAAAAAGCAAAATTAATTTTTTGAGGAGGGGTTGGGGTTGGGGTTGGGGGGGGCTGGCCGGGGGTTAGGGTCAAGGATCTGGTGAAAAAATAAAATTTTGAAATTGAAAATATTTATTTAAATTGATGATTTTCCCAAAAAAAAGTAATTTGAAATTGGAGGTGAGTTATGGAAAATGTTTTCCTTAATTTTTGAAGGGAAGTCATTTTCCTTAATTTTGAGGAAAATGAGTTGATTTGGAAATCATTTTCCGAAACTTTTGTCCCAACCAAACATGTGGAAATTGGAAAACATTTTCCAGAAAATGTTTTCCTTCATACCAAACACACTCTCTGTCCCCTCAAGGTGGAATCTCACATTCAGAAGGCACTTGAATGATTGAGAAGTGGGTAGATTTGTTGAGTTATTACAAGTGCTTAGTGGTTTCTTAGGTTTATCTACAGGATCAGACACAATGAGGTGGGAACATGACAGTGATGACTAGTTCTTATTAAGAAGACTCTAGAGAAATGAAGTGGTGGAGCAACCAGGAAGGAGGGGACATACCAGGTCCTTGGAAACAGATTTGGAAGTGCAGTGTCCCAAACAAGGTGCACTTGGTTGGTGACCTGAAGAGCATGTCTCACTGATGAAAAATTGGAAAGGAGGGGCTTTCAGATGGTATCCAGATGTTTTGTTTTTGGGCTAGGAGAATGAAGAAACTAATAATCATCTTTTCTTCATTGGAAGATTGTATCACAGATCTGGTCTGTGTTTCCAAGTATATCTCGAGCAAATTGGGTAACGCCTGAACACATTGCTGACCTACTTAGCTGATGCATAAGGAGTGGAGGGAGGGAACAGAGTCAGAAGGGACGGTAAGATAATACCATATTGCATATAGTGGTCAGTATGGAGAGAAGAAACAACAGATGCTTTGAGGATATCTCTAACCCAATCTAGATAATCAAAGAAAATTGTATGAATATTTTGTATTTTTGATGTAAAGAAAGGGTTTAGAAATAGCAGAGCAGTTAGCAGATATTTTAGGATGTTTGTACATTTCTGAATTTTGCTCACCTGCACATGCAAATACTCTTTGATTTGTTACTTCTTAAAATTGGGAAATTGACAAGGTTTTCCACATGGTACAACACACGGCATGGAGTTTGGGCTGAAACAGCCCGTCATGTATCTAAGAATGTGAGAGCCGCTTTAATATAGAACTTTGGTTGGGTATGTCCGCTAGCTAGCCCTTTCAGTATTTGCGAGTTGCACACTTGTTCTGAATATAGCTCACCTGCACATCCATATACTCCTTTGATTTGTTACTTCTTGAAATTGAGAAATTGACAAGGTTTTCTACATGGTACACATGGCATGAAGTTTGGGCTGACACGGCCCATCACGTGTCTTTAAGAATGTGAACTTCCCTTTAATATAGAACTTTGTCTGGTATGTCTGTTAGCTAGCCCTTTCAGCATTTGCGAGTTGCACAGTTTTGTTCTGAATTCTGCTCACCTGCACATGCAAATATGCTTTGATTAGTTACTTCTTGAAATTGAGAAATTGACAAGGTTTTCCACATGATACACATGACATGAAGTTTTTTAGCTTGTCACTTGTCTAAGAATGTGAATGTGTCTCTTTAATATAGAACTTTGTCTTGTGTATCTGCTAGCTATCCCTTTCAACATTTGTGAGTTGCACACTTCTGTTCTGAATTTTGCTCACCTGCACATGCAAATACTCTTTGATTTGTTACTTCTTGAAATTGAGAAATTGACAAGATTTTTCACATGGTACACATGGCACTAATTTTGGGCTAAAACATCTGGTCATGTTACAAGAATGTGAAATGTCGCTTTAATATAGAACTTTGTCTGGTATGTCTGCTAGCTAGCCCTTTCAGCATTTGCATGTTGCACACTTCTGTTCTAAATTTCGCTCACCTGCACATGCAAATACTGGTTGATTTGTTACTTCTTGAAATTTAGAAATTTACAAGGTTTTCACATGGTACATATTTCATGAAGTATGGGCTGATACAGCCCGTCATGTGTCTAAGAATGTGAACGTCCCTTTAGTATAGAACTTTATCTGGTATGTCTGCTAGTTAGCCCTCCCCCATTTTCCTTCTTGAATGCCTCTCCTCATCCTAAAATGGAGACAAGAACACCAACTTGAATTTTCTTTACTTTAGTAGTCTTTTTTTTTCTTCATCTTGTTTGTGTTCATCTCTTGCTTGTTGCTCTTTTTGATAAGGTAATGTTTTAATTAATGATTGGAGAAATCCCATATACAAGCCATACACCAAAAAATAAAGAATGTAAACCAAAATATTGTTCTCTACGAAAGGAAAACCAATCATCTATAAAACAGGCACCTTATGGGTGGTGTCATCTTATTTGTATTCACGTCTTTGCTTGTTGCTTATGTAGTTTATACAATTGTTGTTTATGTTTTGATGCATCATTTCACTTCTTGTGGCTCTAATGATGCACTTGATTATATTGAACTAACAGGTTGGAGCAAAAGATCACCAGCGTTTCCAAGCATCTTATGCAATTTTGCTGAAGGCCCGGTTGACTGCACTAAAGAAGAGGGAGAGGAAGGACAAGAGGAAGGCTACTGATTCTGACAAAAAGATGGATATTTCGAAAAAGAAATCTGCTGCTGCTAAAGCCTCTACATGAAACTTTAGTCCTTTGGTTTA-TTCCCCCATTTTGTTTCTAGGATAGAGTTGTAGGATTTGAACCCCATCCATTTGGGGCGACAAGTCTGAAACTTCATTACAACTC</genome_strand>
        <mrna_strand>GTGCGATTACAGCCAGACCCATTCCTCAATGAACTGACGAGTATGTTTGAGCGAACTACTGAACATGGTTCCGTTTGGGTTACGCTCAAACACT............................................................................................CTTCTGATAAATCTAAAGCCCAACGGAATAAGATGAAGACAGCTGGTGAAAATCTTGAATTTAAGTGCCTCATCCGAGCAACTGATGGGAAAAAGAATATTTCCACAATG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGGTGCAAAAGATCACCAGCGTTTCCAAGCATCTTATGCAATTTTGCTGAAGGCCCGGTTGACTGCACTAAAGAAGAGGGAGAGGAAGGACAAGAGGAAGGCTACTGATTCTGACAAAAAGATGGATATTTCGAAAAAGAAATCTGCTGCTGCTAAAGCCTCTACATG-AACTTTAGTCCTTTGGTTCATTTCCCCCATTTTGTTTCTAGGATAGAGTTGTAGGATTTGAACCCCGTCCGTTTGGGGCGACAAGTCTGAAACTGCATTACAACTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E459547" ref_strand="+" ref_description="SGN-E459547 [cPRO-28-O7]">
      <seq>cagacccattcctcaatgaactgacgagtatgtttgagcgaactactgagcatggttccgtttgggttacgctcaaacactcttctgataaatctaaagcccaacggaataagatgaagacagctggtgaaaatcttgaatttaagtgcctcatccgagcaactgatgggaaaaagaatatttccacaatggttggtgcaaaagatcaccagcgtttccaagcatcttatgcaattttgctgaaggcccgcttgactgcactaaagaagagggagaggaaggacaagaggaaggctactgattctgacaaaaagatggatatttcgaaaaagaaatctgctgctgctaaagcctctacatgaactttagtactttggttcatttcccccattttgtttctaggatagagttgtaggatttgaaccccgtccgtttggggcgacaagtctgaaactgcattacaacatctgctgcatagaatgaagaaaggaggtgtttttactcaatttgaagaaattttgtcataatcttgacctttaattccttgaacaacagctttggcaattgaaagtagaggggaccaaattaagagtaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0167M06.1" temp_strand="+" temp_description="C06HBa0167M06.1  AC211057.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0167M06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="74538" stop="83251"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="74838" g_stop="74918" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="81" r_length="81" r_score="0.988"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="74919" i_stop="75010" i_length="92">
            <donor d_prob="0.958" d_score="0.98"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="75011" g_stop="75120" g_length="110"/>
          <reference_exon_boundary r_type="cDNA" r_start="82" r_stop="191" r_length="110" r_score="0.991"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="75121" i_stop="82488" i_length="7368">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="82489" g_stop="82803" g_length="315"/>
          <reference_exon_boundary r_type="cDNA" r_start="192" r_stop="507" r_length="316" r_score="0.956"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="82804" i_stop="82863" i_length="60">
            <donor d_prob="0.000" d_score="0.92"/>
            <acceptor a_prob="0.052" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="82864" g_stop="82951" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="508" r_stop="594" r_length="87" r_score="0.943"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0167M06.1" gen_strand="+" ref_id="SGN-E459547" ref_strand="+">
        <total_alignment_score>0.965</total_alignment_score>
        <cumulative_length_of_scored_exons>594</cumulative_length_of_scored_exons>
        <coverage percentage="0.985" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0167M06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E459547" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="74838" e_stop="74918"/>
          <exon e_start="75011" e_stop="75120"/>
          <exon e_start="82489" e_stop="82803"/>
          <exon e_start="82864" e_stop="82951"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGACCCATTCCTCAATGAACTGACGAGTATGTTTGAGCGAACTACTGAGCATGGTTCCGTTTGGGTTACGCTTAAACACTGTGAGTTTGCCTCTTCGTTGGTTTTCCTGTGTTTTGTGCTTTGTATTCTCTTTATGAGTAATACTGATTGAGCAATCTTGTCCTTTGTATAGCTTCTGATAAATCTAAAGCCCAACGGAATAAGATGAAGACAGCTGGTGAAACTCTTGAATTTAAGTGCCTCATCCGAGCAACTGATGGGAAAAAGAATATTTCCACAATGGTAATTATCACAATAGAAAGTCTCTTACCTTTTTCCATCACCTTCTTTTTGCAAGTCTTGTCGTTTTCCCCATTTTTTTGCTTTGTTGGGCACTATGTTCTCTGGAACATTGAGGGTGTTAGTTTGTTGTATGAATTATTTTTTAGCATAAGTTTAAATGTGCAAATATAGATAATTCTAGGTCCTGGCCTGTATGTTTGAGATTGAGAGCATCAAATTCAAAAAAAGGATGGTAGCCTTGTGGTGCATAGAGAATGGGAGTCGTGGTCCTTGTTTACTTGATTGATAACTAATAGGTATCGTACATGCTTGTAATACAATATTAGAGCACATAAAGGGACAATTTCTCATAAAAGGCAAACAAATTATGGATGCAACTCTTTTAGTCAGTGAACCTGTGGATTCTAGACTCGAAGGTGAAGATCCAGGGATCATGTGAAACCTAGCTATAGAGAACCCATTATGATCATGTCAACTGGGAGTTACTTCTCAACCTTCTTTAAAAAATGGGTTTTGGTGGAAGATGGTTAAAGTGGATGGTTTTTGTATCAATACTGTCCTGAATTCTAGTCATAGGAGAAATTGCTGGAATTTTCCCTCAGAGAAAGAGGACTCGGGGAGACCCCCCTCTCTTTGCCTTTTCATATTAGCTATGGAAGGTTTCAGTAGTATGATGAGAGGTACTATTCAGAACAGTGGATAAAAGGTTTCAGGATAGGCAATCAAGCAGGGGAAGAGATGTAGATTTCCTTTCATTATTGCTGATGATATAGTTGTTTTCTAAGATGCTAAAGCAGATCAGATCATGTACATCAGAATGATTTTGGTGATCTTTGGGCAATTTTTGGTCCATTTGTAAAATTGGAGGAAAGGTAGTAGTTTCCCTGTCAAAGAAGTTCCACAAATTCAATGCCTGTCCATGTTATAAGTTTCGATGATTTAACAAACTATGACATCTAGTTGGGGACCTGATCCCATGAGGGACTGAGAGTTTCAGGCAATGTGCAAAGGACAGTTGTAAAGCTGCAACTGCTGCCACAATTGCAGTGGTTGGTGCACCTTTTCAGAGGAATAGTACTCAGCCAATGGCGTTGCACTAGGTAGTTTGTCCATCTTATAATAGTCATCTTGTCAAGGGACGTTTCCTAATTTTTGAGTTGAAGATTTCCATACGGCAAAATCCACTCTCAAAAAGAAATATTCTCATATGCATCAAGAGATCTGATCGAGTGATCTACTGTTCCCTTTAGTTGTTATTTTAGTTTATCGTCTCGTGTTTATACAGTGTAAGATCTGTTCATATGTTATAAAGGAATCAGATCATTTCAGTTGTAATCGTTGTTAAAAGTTTGAGTTGTAGCTAGAGTTAGCTATGTCGTGTTCTTGAAGTCTACATTAACTTAGCTTGTTGGCGTAGTAGGCAATAGAGGTATTACTTTGTTTATGAGTAACAAAGCTGTTACGAAAGGAGAAGGGATTAAGAGTTCATTTCCTAGGTTGCAAGAGTTTGTAATCGGGATCTTAACTCTTTGAAGTAATGGAATTGGCGAAATCCTGTGAGACAGGTTGTGATTTTCTCCTTCCTTAAGCAAGGGGGTTAACACGTAAACATTTTGTGTTCTTTATTTTAAGTTTTTCTTTCTGCACTGTTCTTACTATGTGAACGGACTTGGTCCATTGACTTGTGGTGGACGCATGTAAGTCATCAGTCCAACATCTTGAGTTGTAAAATTGAGAATTTCCCGACCAACTTACTTGGGGATGCCCCTTGGAAACAATCATAAGGAGCTAGAAGTTTGGGATGAGATTATTGAAAAAATTAGTAACCAAACTCAAAATGTGTTGAGCGCTCGACTTGCTTTATGTGCGCTTCGGTGTCGTCACCAGTGTTCTAAGACATATTTTTCCTTGCCAATGTGTCTCTGCCGAAGAGGTGACACTAAACAATTGATATTTCACTTAATCACATTTTTTTTGAAAAGGTACTTTATCATTATTTTTTTCGATTTCTTCAGTCATATATTTGTTATTTGTGTTTATAATTATTCGTCTTGGACTCAGCATATATATTTGTAATTTTTTCTCCCTTTGTGCCTTTTTTCATTAAAGCCCATTCTTTGTTTGCACATAAAGGTCCAATGGGCCTTAGAGTTTTTTTGCGCTTTTCGCGTTTGATAACACTTGAAAAACTAGCCAATTGGAAAGCCCGATGTTTATCTCTTGGAGGAAGTAGTACTCTTATGAACTCAGTATTGGACTCATTGCCAACACATGTCATGTCCTTATTTCTAATGCCTTCAGGTGGAGGATACCATACAAGTTGAGGACTTTCTATGTTAGGTAATAAGGAGGGCAGAGGTATTCACTAAGTGAAATGCCAAACTGCTCAGCTTATGGTTGACTTGGTATTAGGAATCTGGGGCTTCAAAACAGATGCTTATTGACAAAATGGAGGTTTGTTGGTGAGGATCATGCACTCTGGAAGGAAGTAACTATAAAAATATGGGCAGAGTAACTATTTGTGTTCTAATATGGTCTATGTTGGCTGGGAATATAGACTGTAGTGTGTGGAATGACACCTAGATCCTTTTTCCGAGAGATAAATGGATTGGACTCGAGCCTTTAATGAGCTCATTTTCGGAACTGTTCTCATTTTGTAGCAACTCTGAAGCATCAATAGTTGACACTCTGGGTGTGTTTGTGTCACGACCCAAACCGGGTTGCGACTGGCACCCACACTTACCCTCCTATGTGAGCGAACCAACCAATCTAAACCTTAACATTTCAATGTAATAACAGTAGAAAATAATGCGGAAGACTTAACTCATTAATAAAATCAATTCAATAACTATCAATATTCAACATCTATTATTCCCAAAACCTGGAAGTCATCATCACAAGAACATCTACGATCAAATGACTAAACTAAGAGTATTCTAAAAGCTAAAAATACATAAGAAGCTAGTCCATGCCGGAAGTTCAAGGCATCAAGACTTGAAGAAGAAGATCCAGTCCAAGCTAGAAGCATTAGCTCACCCTGAATTTCCGATGTAGTAAGACTGGCTTGAATTACTGTTGAGTTGAAGACGATGGCACGTTTGCTGCACTCCACAAATAAACAAGAAGAAAACATAAAAGTAGGGGTCAGTACAAAACACGGGTACTGAGTAGATATCATCGGCCAACTCAAAATAGGGAACAGTATATATCAATATTATCGTAAATCAACTATAAAACTCAACATGTAGCCACAACAAGTATTATAATCATCAATAAGTACCATCAAGTTCATCCATGAGGGCTCAAGCCTCAACACCATACTCATTTGGGAATTATGTTCGTTAGATTGAGTATATTAACATCTTTCAAGATTCATTATCTTTAATTCTCTTGTGTCGGTACGTGACACTCCGATCCCTCATATTCATTATTCCTCTTGTGTCGGTACGTGACACTCTGATCCCCTATATCTACGTGTCGGTTCGTGACACCCGATCCCCTACATCATTCTGTAAATCATCAGGCCTTCTCTATACCAAGGTATCATCAATCCTATTACTTTAATTCATCAAGCCTTCTTCTATACCAAGGCATCATCATTAATAATGTATATTAAAGTTTCCTTTCAAGATTTGGGATTCAATATTTTCATCATGCTTATCTTATCACAATCACATAATCATATTCACGCAAACATACAATTAAGCTTATAGTAGGGTTTACAATACTACCAATACATATCATTCTCTATTAAGAGTTTACTATGAAAGCATGAAAACCATAACCTACCTCCACCGAAGAGTTGAATCAAGCAAGAATTTTCCCAAAGCTTTGTTTCTCCCTTCTCGTTCGATTTTCTCTCTCTCTCTTGTTCTTTCTATTTTCTTTATTCAAACCCTCTTTCTTTTACCCTAATTAGTATATAATTAAGAATAAAAGATGGCAATAATACCCCACTAATTAACTTAGGGTTACCTCTTTTAACCCCTCAAGAATTTGAGTTATTAATATAACCCCACGAACTTTATAATTAAGGCAAGAATAGTCAAAAACGTCCCTTAAAACTTAACCAGAAATCCGACTCTGCCTGGGATTTGCGCAACCTGTGACGGGCCGTCGTGCCTGCGACGGTCCGTCCTGCAGGTCGTCGCAGAGTTCAGAGACCCAAATTTCCACCAAGGGTCTGTGACGGTCCGTCACACCTGTGACGGTCCGTCCTGCCATTCCGTCACAAAGTTCAGAGAGTCGATTTTTAGTACCCAATTTCAGATTTTCTAAGTGTTTTGAAACGAGACCCTGCGACGGTCCCTCGTGCCCTTGACGGTCCGTCGTGGGGTCCGTCGCTTCTGCCAGTTTTTCCAGAATTGAAGTCTGTTGCTCAAAACGACTAAACGGGTCGTTACAGTTTGGTATGGAGGAAAATGTTTTCCATGGAAAATGTTTTCCTAGAAAATGTTTTCCTGGAAAACAAGTAAATTTTGGACTTATTTTCTCATGTTTGGTTGGTGAGTAGAAAATATTTTCTGGATATGATTTTTAGTGTTTGATTTATGAATGAAAAATGTTTTTGAGAGACATTTTTTATTTTTACTAGAGTAAAAAATAATTTATGATATTGAAAATATTTTTCAAAATCAAAATTATTATTTTTTTGGGTGGTGGTGGGGGTGGGGTGGGGGCAGGGCGGGGGGAGGGGGAGGGGATAGGAGTGAAAAAATAAAAATTTGAATTTGATAGTATTTTTAAAAAACAAAATTAATTTTTTTGGGGATTGGGGTGGGTGGGGGCTGGTAGGGGGGCTGGCCGGGAGTGGGGGGGAGGGGTAGGAGTTAAAAAATAAAAAATTTGAAGTTGAAAATATTTTTAAAAAGCAAAATTAATTTTTTGAGGAGGGGTTGGGGTTGGGGTTGGGGGGGGCTGGCCGGGGGTTAGGGTCAAGGATCTGGTGAAAAAATAAAATTTTGAAATTGAAAATATTTATTTAAATTGATGATTTTCCCAAAAAAAAGTAATTTGAAATTGGAGGTGAGTTATGGAAAATGTTTTCCTTAATTTTTGAAGGGAAGTCATTTTCCTTAATTTTGAGGAAAATGAGTTGATTTGGAAATCATTTTCCGAAACTTTTGTCCCAACCAAACATGTGGAAATTGGAAAACATTTTCCAGAAAATGTTTTCCTTCATACCAAACACACTCTCTGTCCCCTCAAGGTGGAATCTCACATTCAGAAGGCACTTGAATGATTGAGAAGTGGGTAGATTTGTTGAGTTATTACAAGTGCTTAGTGGTTTCTTAGGTTTATCTACAGGATCAGACACAATGAGGTGGGAACATGACAGTGATGACTAGTTCTTATTAAGAAGACTCTAGAGAAATGAAGTGGTGGAGCAACCAGGAAGGAGGGGACATACCAGGTCCTTGGAAACAGATTTGGAAGTGCAGTGTCCCAAACAAGGTGCACTTGGTTGGTGACCTGAAGAGCATGTCTCACTGATGAAAAATTGGAAAGGAGGGGCTTTCAGATGGTATCCAGATGTTTTGTTTTTGGGCTAGGAGAATGAAGAAACTAATAATCATCTTTTCTTCATTGGAAGATTGTATCACAGATCTGGTCTGTGTTTCCAAGTATATCTCGAGCAAATTGGGTAACGCCTGAACACATTGCTGACCTACTTAGCTGATGCATAAGGAGTGGAGGGAGGGAACAGAGTCAGAAGGGACGGTAAGATAATACCATATTGCATATAGTGGTCAGTATGGAGAGAAGAAACAACAGATGCTTTGAGGATATCTCTAACCCAATCTAGATAATCAAAGAAAATTGTATGAATATTTTGTATTTTTGATGTAAAGAAAGGGTTTAGAAATAGCAGAGCAGTTAGCAGATATTTTAGGATGTTTGTACATTTCTGAATTTTGCTCACCTGCACATGCAAATACTCTTTGATTTGTTACTTCTTAAAATTGGGAAATTGACAAGGTTTTCCACATGGTACAACACACGGCATGGAGTTTGGGCTGAAACAGCCCGTCATGTATCTAAGAATGTGAGAGCCGCTTTAATATAGAACTTTGGTTGGGTATGTCCGCTAGCTAGCCCTTTCAGTATTTGCGAGTTGCACACTTGTTCTGAATATAGCTCACCTGCACATCCATATACTCCTTTGATTTGTTACTTCTTGAAATTGAGAAATTGACAAGGTTTTCTACATGGTACACATGGCATGAAGTTTGGGCTGACACGGCCCATCACGTGTCTTTAAGAATGTGAACTTCCCTTTAATATAGAACTTTGTCTGGTATGTCTGTTAGCTAGCCCTTTCAGCATTTGCGAGTTGCACAGTTTTGTTCTGAATTCTGCTCACCTGCACATGCAAATATGCTTTGATTAGTTACTTCTTGAAATTGAGAAATTGACAAGGTTTTCCACATGATACACATGACATGAAGTTTTTTAGCTTGTCACTTGTCTAAGAATGTGAATGTGTCTCTTTAATATAGAACTTTGTCTTGTGTATCTGCTAGCTATCCCTTTCAACATTTGTGAGTTGCACACTTCTGTTCTGAATTTTGCTCACCTGCACATGCAAATACTCTTTGATTTGTTACTTCTTGAAATTGAGAAATTGACAAGATTTTTCACATGGTACACATGGCACTAATTTTGGGCTAAAACATCTGGTCATGTTACAAGAATGTGAAATGTCGCTTTAATATAGAACTTTGTCTGGTATGTCTGCTAGCTAGCCCTTTCAGCATTTGCATGTTGCACACTTCTGTTCTAAATTTCGCTCACCTGCACATGCAAATACTGGTTGATTTGTTACTTCTTGAAATTTAGAAATTTACAAGGTTTTCACATGGTACATATTTCATGAAGTATGGGCTGATACAGCCCGTCATGTGTCTAAGAATGTGAACGTCCCTTTAGTATAGAACTTTATCTGGTATGTCTGCTAGTTAGCCCTCCCCCATTTTCCTTCTTGAATGCCTCTCCTCATCCTAAAATGGAGACAAGAACACCAACTTGAATTTTCTTTACTTTAGTAGTCTTTTTTTTTCTTCATCTTGTTTGTGTTCATCTCTTGCTTGTTGCTCTTTTTGATAAGGTAATGTTTTAATTAATGATTGGAGAAATCCCATATACAAGCCATACACCAAAAAATAAAGAATGTAAACCAAAATATTGTTCTCTACGAAAGGAAAACCAATCATCTATAAAACAGGCACCTTATGGGTGGTGTCATCTTATTTGTATTCACGTCTTTGCTTGTTGCTTATGTAGTTTATACAATTGTTGTTTATGTTTTGATGCATCATTTCACTTCTTGTGGCTCTAATGATGCACTTGATTATATTGAACTAACAGGTTGGAGCAAAAGATCACCAGCGTTTCCAAGCATCTTATGCAATTTTGCTGAAGGCCCGGTTGACTGCACTAAAGAAGAGGGAGAGGAAGGACAAGAGGAAGGCTACTGATTCTGACAAAAAGATGGATATTTCGAAAAAGAAATCTGCTGCTGCTAAAGCCTCTACATGAAACTTTAGTCCTTTGGTTTA-TTCCCCCATTTTGTTTCTAGGATAGAGTTGTAGGATTTGAACCCCATCCATTTGGGGCGACAAGTCTGAAACTTCATTACAAC-TCCACTGCATAGAATGAAGAAAGGAGGTGTTTTTACTCAATTTGATTATTCACATCTAAATTAGTCAAACTTTTTAAAGAGCTTGTTGGGTTATGGAACAGTTGAAGGAATTTTGTCATAATCTTGATCTTTTAATTCCTTGAACAACAGCTTTGGCAATTGAAAGTAGATGGGACCAAATTAAAAGTA</genome_strand>
        <mrna_strand>CAGACCCATTCCTCAATGAACTGACGAGTATGTTTGAGCGAACTACTGAGCATGGTTCCGTTTGGGTTACGCTCAAACACT............................................................................................CTTCTGATAAATCTAAAGCCCAACGGAATAAGATGAAGACAGCTGGTGAAAATCTTGAATTTAAGTGCCTCATCCGAGCAACTGATGGGAAAAAGAATATTTCCACAATG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGGTGCAAAAGATCACCAGCGTTTCCAAGCATCTTATGCAATTTTGCTGAAGGCCCGCTTGACTGCACTAAAGAAGAGGGAGAGGAAGGACAAGAGGAAGGCTACTGATTCTGACAAAAAGATGGATATTTCGAAAAAGAAATCTGCTGCTGCTAAAGCCTCTACATG-AACTTTAGTACTTTGGTTCATTTCCCCCATTTTGTTTCTAGGATAGAGTTGTAGGATTTGAACCCCGTCCGTTTGGGGCGACAAGTCTGAAACTGCATTACAACATCTGCTGCATAGAATGAAGAAAGGAGGTGTTTTTACTCAAT............................................................TTGAAGAAATTTTGTCATAATCTTGA-CCTTTAATTCCTTGAACAACAGCTTTGGCAATTGAAAGTAGAGGGGACCAAATTAAGAGTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E466080" ref_strand="+" ref_description="SGN-E466080 [cPRO-23-K11]">
      <seq>cagacccattcctcaatgaactgacgagtatgtttgagcgaactactgagcatggttccgtttgggttacgctcaaacactcttctgataaatctaaagcccaacggaataagatgaagacagctggtgaaaatcttgaatttaagtgcctcatccgagcaactgatgggaaaaagaatatttccacaatggttggtgcaaaagatcaccagcgtttccaagcatcttatgcaattttgctgaaggcccgcttgactgcactaaagaagagggagaggaaggacaagaggaaggctactgattctgacaaaaagatggatatttcgaaaaagaaatctgctgctgctaaagcctctacatgaactttagtactttggttcatttcccccattttgtttctaggatagagttgtaggatttgaaccccgtccgtttggggcgacaagtctgaaactgcattacaacatctgctgcatagaatgaagaaaggaggtgtttttactcaatttgaagaaattttgtcataatcttgacctttaattccttgaacaacagctttggcaattgaaagtagaggggaccaaattaagagtaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0167M06.1" temp_strand="+" temp_description="C06HBa0167M06.1  AC211057.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0167M06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="74538" stop="83251"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="74838" g_stop="74918" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="81" r_length="81" r_score="0.988"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="74919" i_stop="75010" i_length="92">
            <donor d_prob="0.958" d_score="0.98"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="75011" g_stop="75120" g_length="110"/>
          <reference_exon_boundary r_type="cDNA" r_start="82" r_stop="191" r_length="110" r_score="0.991"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="75121" i_stop="82488" i_length="7368">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="82489" g_stop="82803" g_length="315"/>
          <reference_exon_boundary r_type="cDNA" r_start="192" r_stop="507" r_length="316" r_score="0.956"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="82804" i_stop="82863" i_length="60">
            <donor d_prob="0.000" d_score="0.92"/>
            <acceptor a_prob="0.052" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="82864" g_stop="82951" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="508" r_stop="594" r_length="87" r_score="0.943"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0167M06.1" gen_strand="+" ref_id="SGN-E466080" ref_strand="+">
        <total_alignment_score>0.965</total_alignment_score>
        <cumulative_length_of_scored_exons>594</cumulative_length_of_scored_exons>
        <coverage percentage="0.985" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0167M06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E466080" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="74838" e_stop="74918"/>
          <exon e_start="75011" e_stop="75120"/>
          <exon e_start="82489" e_stop="82803"/>
          <exon e_start="82864" e_stop="82951"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGACCCATTCCTCAATGAACTGACGAGTATGTTTGAGCGAACTACTGAGCATGGTTCCGTTTGGGTTACGCTTAAACACTGTGAGTTTGCCTCTTCGTTGGTTTTCCTGTGTTTTGTGCTTTGTATTCTCTTTATGAGTAATACTGATTGAGCAATCTTGTCCTTTGTATAGCTTCTGATAAATCTAAAGCCCAACGGAATAAGATGAAGACAGCTGGTGAAACTCTTGAATTTAAGTGCCTCATCCGAGCAACTGATGGGAAAAAGAATATTTCCACAATGGTAATTATCACAATAGAAAGTCTCTTACCTTTTTCCATCACCTTCTTTTTGCAAGTCTTGTCGTTTTCCCCATTTTTTTGCTTTGTTGGGCACTATGTTCTCTGGAACATTGAGGGTGTTAGTTTGTTGTATGAATTATTTTTTAGCATAAGTTTAAATGTGCAAATATAGATAATTCTAGGTCCTGGCCTGTATGTTTGAGATTGAGAGCATCAAATTCAAAAAAAGGATGGTAGCCTTGTGGTGCATAGAGAATGGGAGTCGTGGTCCTTGTTTACTTGATTGATAACTAATAGGTATCGTACATGCTTGTAATACAATATTAGAGCACATAAAGGGACAATTTCTCATAAAAGGCAAACAAATTATGGATGCAACTCTTTTAGTCAGTGAACCTGTGGATTCTAGACTCGAAGGTGAAGATCCAGGGATCATGTGAAACCTAGCTATAGAGAACCCATTATGATCATGTCAACTGGGAGTTACTTCTCAACCTTCTTTAAAAAATGGGTTTTGGTGGAAGATGGTTAAAGTGGATGGTTTTTGTATCAATACTGTCCTGAATTCTAGTCATAGGAGAAATTGCTGGAATTTTCCCTCAGAGAAAGAGGACTCGGGGAGACCCCCCTCTCTTTGCCTTTTCATATTAGCTATGGAAGGTTTCAGTAGTATGATGAGAGGTACTATTCAGAACAGTGGATAAAAGGTTTCAGGATAGGCAATCAAGCAGGGGAAGAGATGTAGATTTCCTTTCATTATTGCTGATGATATAGTTGTTTTCTAAGATGCTAAAGCAGATCAGATCATGTACATCAGAATGATTTTGGTGATCTTTGGGCAATTTTTGGTCCATTTGTAAAATTGGAGGAAAGGTAGTAGTTTCCCTGTCAAAGAAGTTCCACAAATTCAATGCCTGTCCATGTTATAAGTTTCGATGATTTAACAAACTATGACATCTAGTTGGGGACCTGATCCCATGAGGGACTGAGAGTTTCAGGCAATGTGCAAAGGACAGTTGTAAAGCTGCAACTGCTGCCACAATTGCAGTGGTTGGTGCACCTTTTCAGAGGAATAGTACTCAGCCAATGGCGTTGCACTAGGTAGTTTGTCCATCTTATAATAGTCATCTTGTCAAGGGACGTTTCCTAATTTTTGAGTTGAAGATTTCCATACGGCAAAATCCACTCTCAAAAAGAAATATTCTCATATGCATCAAGAGATCTGATCGAGTGATCTACTGTTCCCTTTAGTTGTTATTTTAGTTTATCGTCTCGTGTTTATACAGTGTAAGATCTGTTCATATGTTATAAAGGAATCAGATCATTTCAGTTGTAATCGTTGTTAAAAGTTTGAGTTGTAGCTAGAGTTAGCTATGTCGTGTTCTTGAAGTCTACATTAACTTAGCTTGTTGGCGTAGTAGGCAATAGAGGTATTACTTTGTTTATGAGTAACAAAGCTGTTACGAAAGGAGAAGGGATTAAGAGTTCATTTCCTAGGTTGCAAGAGTTTGTAATCGGGATCTTAACTCTTTGAAGTAATGGAATTGGCGAAATCCTGTGAGACAGGTTGTGATTTTCTCCTTCCTTAAGCAAGGGGGTTAACACGTAAACATTTTGTGTTCTTTATTTTAAGTTTTTCTTTCTGCACTGTTCTTACTATGTGAACGGACTTGGTCCATTGACTTGTGGTGGACGCATGTAAGTCATCAGTCCAACATCTTGAGTTGTAAAATTGAGAATTTCCCGACCAACTTACTTGGGGATGCCCCTTGGAAACAATCATAAGGAGCTAGAAGTTTGGGATGAGATTATTGAAAAAATTAGTAACCAAACTCAAAATGTGTTGAGCGCTCGACTTGCTTTATGTGCGCTTCGGTGTCGTCACCAGTGTTCTAAGACATATTTTTCCTTGCCAATGTGTCTCTGCCGAAGAGGTGACACTAAACAATTGATATTTCACTTAATCACATTTTTTTTGAAAAGGTACTTTATCATTATTTTTTTCGATTTCTTCAGTCATATATTTGTTATTTGTGTTTATAATTATTCGTCTTGGACTCAGCATATATATTTGTAATTTTTTCTCCCTTTGTGCCTTTTTTCATTAAAGCCCATTCTTTGTTTGCACATAAAGGTCCAATGGGCCTTAGAGTTTTTTTGCGCTTTTCGCGTTTGATAACACTTGAAAAACTAGCCAATTGGAAAGCCCGATGTTTATCTCTTGGAGGAAGTAGTACTCTTATGAACTCAGTATTGGACTCATTGCCAACACATGTCATGTCCTTATTTCTAATGCCTTCAGGTGGAGGATACCATACAAGTTGAGGACTTTCTATGTTAGGTAATAAGGAGGGCAGAGGTATTCACTAAGTGAAATGCCAAACTGCTCAGCTTATGGTTGACTTGGTATTAGGAATCTGGGGCTTCAAAACAGATGCTTATTGACAAAATGGAGGTTTGTTGGTGAGGATCATGCACTCTGGAAGGAAGTAACTATAAAAATATGGGCAGAGTAACTATTTGTGTTCTAATATGGTCTATGTTGGCTGGGAATATAGACTGTAGTGTGTGGAATGACACCTAGATCCTTTTTCCGAGAGATAAATGGATTGGACTCGAGCCTTTAATGAGCTCATTTTCGGAACTGTTCTCATTTTGTAGCAACTCTGAAGCATCAATAGTTGACACTCTGGGTGTGTTTGTGTCACGACCCAAACCGGGTTGCGACTGGCACCCACACTTACCCTCCTATGTGAGCGAACCAACCAATCTAAACCTTAACATTTCAATGTAATAACAGTAGAAAATAATGCGGAAGACTTAACTCATTAATAAAATCAATTCAATAACTATCAATATTCAACATCTATTATTCCCAAAACCTGGAAGTCATCATCACAAGAACATCTACGATCAAATGACTAAACTAAGAGTATTCTAAAAGCTAAAAATACATAAGAAGCTAGTCCATGCCGGAAGTTCAAGGCATCAAGACTTGAAGAAGAAGATCCAGTCCAAGCTAGAAGCATTAGCTCACCCTGAATTTCCGATGTAGTAAGACTGGCTTGAATTACTGTTGAGTTGAAGACGATGGCACGTTTGCTGCACTCCACAAATAAACAAGAAGAAAACATAAAAGTAGGGGTCAGTACAAAACACGGGTACTGAGTAGATATCATCGGCCAACTCAAAATAGGGAACAGTATATATCAATATTATCGTAAATCAACTATAAAACTCAACATGTAGCCACAACAAGTATTATAATCATCAATAAGTACCATCAAGTTCATCCATGAGGGCTCAAGCCTCAACACCATACTCATTTGGGAATTATGTTCGTTAGATTGAGTATATTAACATCTTTCAAGATTCATTATCTTTAATTCTCTTGTGTCGGTACGTGACACTCCGATCCCTCATATTCATTATTCCTCTTGTGTCGGTACGTGACACTCTGATCCCCTATATCTACGTGTCGGTTCGTGACACCCGATCCCCTACATCATTCTGTAAATCATCAGGCCTTCTCTATACCAAGGTATCATCAATCCTATTACTTTAATTCATCAAGCCTTCTTCTATACCAAGGCATCATCATTAATAATGTATATTAAAGTTTCCTTTCAAGATTTGGGATTCAATATTTTCATCATGCTTATCTTATCACAATCACATAATCATATTCACGCAAACATACAATTAAGCTTATAGTAGGGTTTACAATACTACCAATACATATCATTCTCTATTAAGAGTTTACTATGAAAGCATGAAAACCATAACCTACCTCCACCGAAGAGTTGAATCAAGCAAGAATTTTCCCAAAGCTTTGTTTCTCCCTTCTCGTTCGATTTTCTCTCTCTCTCTTGTTCTTTCTATTTTCTTTATTCAAACCCTCTTTCTTTTACCCTAATTAGTATATAATTAAGAATAAAAGATGGCAATAATACCCCACTAATTAACTTAGGGTTACCTCTTTTAACCCCTCAAGAATTTGAGTTATTAATATAACCCCACGAACTTTATAATTAAGGCAAGAATAGTCAAAAACGTCCCTTAAAACTTAACCAGAAATCCGACTCTGCCTGGGATTTGCGCAACCTGTGACGGGCCGTCGTGCCTGCGACGGTCCGTCCTGCAGGTCGTCGCAGAGTTCAGAGACCCAAATTTCCACCAAGGGTCTGTGACGGTCCGTCACACCTGTGACGGTCCGTCCTGCCATTCCGTCACAAAGTTCAGAGAGTCGATTTTTAGTACCCAATTTCAGATTTTCTAAGTGTTTTGAAACGAGACCCTGCGACGGTCCCTCGTGCCCTTGACGGTCCGTCGTGGGGTCCGTCGCTTCTGCCAGTTTTTCCAGAATTGAAGTCTGTTGCTCAAAACGACTAAACGGGTCGTTACAGTTTGGTATGGAGGAAAATGTTTTCCATGGAAAATGTTTTCCTAGAAAATGTTTTCCTGGAAAACAAGTAAATTTTGGACTTATTTTCTCATGTTTGGTTGGTGAGTAGAAAATATTTTCTGGATATGATTTTTAGTGTTTGATTTATGAATGAAAAATGTTTTTGAGAGACATTTTTTATTTTTACTAGAGTAAAAAATAATTTATGATATTGAAAATATTTTTCAAAATCAAAATTATTATTTTTTTGGGTGGTGGTGGGGGTGGGGTGGGGGCAGGGCGGGGGGAGGGGGAGGGGATAGGAGTGAAAAAATAAAAATTTGAATTTGATAGTATTTTTAAAAAACAAAATTAATTTTTTTGGGGATTGGGGTGGGTGGGGGCTGGTAGGGGGGCTGGCCGGGAGTGGGGGGGAGGGGTAGGAGTTAAAAAATAAAAAATTTGAAGTTGAAAATATTTTTAAAAAGCAAAATTAATTTTTTGAGGAGGGGTTGGGGTTGGGGTTGGGGGGGGCTGGCCGGGGGTTAGGGTCAAGGATCTGGTGAAAAAATAAAATTTTGAAATTGAAAATATTTATTTAAATTGATGATTTTCCCAAAAAAAAGTAATTTGAAATTGGAGGTGAGTTATGGAAAATGTTTTCCTTAATTTTTGAAGGGAAGTCATTTTCCTTAATTTTGAGGAAAATGAGTTGATTTGGAAATCATTTTCCGAAACTTTTGTCCCAACCAAACATGTGGAAATTGGAAAACATTTTCCAGAAAATGTTTTCCTTCATACCAAACACACTCTCTGTCCCCTCAAGGTGGAATCTCACATTCAGAAGGCACTTGAATGATTGAGAAGTGGGTAGATTTGTTGAGTTATTACAAGTGCTTAGTGGTTTCTTAGGTTTATCTACAGGATCAGACACAATGAGGTGGGAACATGACAGTGATGACTAGTTCTTATTAAGAAGACTCTAGAGAAATGAAGTGGTGGAGCAACCAGGAAGGAGGGGACATACCAGGTCCTTGGAAACAGATTTGGAAGTGCAGTGTCCCAAACAAGGTGCACTTGGTTGGTGACCTGAAGAGCATGTCTCACTGATGAAAAATTGGAAAGGAGGGGCTTTCAGATGGTATCCAGATGTTTTGTTTTTGGGCTAGGAGAATGAAGAAACTAATAATCATCTTTTCTTCATTGGAAGATTGTATCACAGATCTGGTCTGTGTTTCCAAGTATATCTCGAGCAAATTGGGTAACGCCTGAACACATTGCTGACCTACTTAGCTGATGCATAAGGAGTGGAGGGAGGGAACAGAGTCAGAAGGGACGGTAAGATAATACCATATTGCATATAGTGGTCAGTATGGAGAGAAGAAACAACAGATGCTTTGAGGATATCTCTAACCCAATCTAGATAATCAAAGAAAATTGTATGAATATTTTGTATTTTTGATGTAAAGAAAGGGTTTAGAAATAGCAGAGCAGTTAGCAGATATTTTAGGATGTTTGTACATTTCTGAATTTTGCTCACCTGCACATGCAAATACTCTTTGATTTGTTACTTCTTAAAATTGGGAAATTGACAAGGTTTTCCACATGGTACAACACACGGCATGGAGTTTGGGCTGAAACAGCCCGTCATGTATCTAAGAATGTGAGAGCCGCTTTAATATAGAACTTTGGTTGGGTATGTCCGCTAGCTAGCCCTTTCAGTATTTGCGAGTTGCACACTTGTTCTGAATATAGCTCACCTGCACATCCATATACTCCTTTGATTTGTTACTTCTTGAAATTGAGAAATTGACAAGGTTTTCTACATGGTACACATGGCATGAAGTTTGGGCTGACACGGCCCATCACGTGTCTTTAAGAATGTGAACTTCCCTTTAATATAGAACTTTGTCTGGTATGTCTGTTAGCTAGCCCTTTCAGCATTTGCGAGTTGCACAGTTTTGTTCTGAATTCTGCTCACCTGCACATGCAAATATGCTTTGATTAGTTACTTCTTGAAATTGAGAAATTGACAAGGTTTTCCACATGATACACATGACATGAAGTTTTTTAGCTTGTCACTTGTCTAAGAATGTGAATGTGTCTCTTTAATATAGAACTTTGTCTTGTGTATCTGCTAGCTATCCCTTTCAACATTTGTGAGTTGCACACTTCTGTTCTGAATTTTGCTCACCTGCACATGCAAATACTCTTTGATTTGTTACTTCTTGAAATTGAGAAATTGACAAGATTTTTCACATGGTACACATGGCACTAATTTTGGGCTAAAACATCTGGTCATGTTACAAGAATGTGAAATGTCGCTTTAATATAGAACTTTGTCTGGTATGTCTGCTAGCTAGCCCTTTCAGCATTTGCATGTTGCACACTTCTGTTCTAAATTTCGCTCACCTGCACATGCAAATACTGGTTGATTTGTTACTTCTTGAAATTTAGAAATTTACAAGGTTTTCACATGGTACATATTTCATGAAGTATGGGCTGATACAGCCCGTCATGTGTCTAAGAATGTGAACGTCCCTTTAGTATAGAACTTTATCTGGTATGTCTGCTAGTTAGCCCTCCCCCATTTTCCTTCTTGAATGCCTCTCCTCATCCTAAAATGGAGACAAGAACACCAACTTGAATTTTCTTTACTTTAGTAGTCTTTTTTTTTCTTCATCTTGTTTGTGTTCATCTCTTGCTTGTTGCTCTTTTTGATAAGGTAATGTTTTAATTAATGATTGGAGAAATCCCATATACAAGCCATACACCAAAAAATAAAGAATGTAAACCAAAATATTGTTCTCTACGAAAGGAAAACCAATCATCTATAAAACAGGCACCTTATGGGTGGTGTCATCTTATTTGTATTCACGTCTTTGCTTGTTGCTTATGTAGTTTATACAATTGTTGTTTATGTTTTGATGCATCATTTCACTTCTTGTGGCTCTAATGATGCACTTGATTATATTGAACTAACAGGTTGGAGCAAAAGATCACCAGCGTTTCCAAGCATCTTATGCAATTTTGCTGAAGGCCCGGTTGACTGCACTAAAGAAGAGGGAGAGGAAGGACAAGAGGAAGGCTACTGATTCTGACAAAAAGATGGATATTTCGAAAAAGAAATCTGCTGCTGCTAAAGCCTCTACATGAAACTTTAGTCCTTTGGTTTA-TTCCCCCATTTTGTTTCTAGGATAGAGTTGTAGGATTTGAACCCCATCCATTTGGGGCGACAAGTCTGAAACTTCATTACAAC-TCCACTGCATAGAATGAAGAAAGGAGGTGTTTTTACTCAATTTGATTATTCACATCTAAATTAGTCAAACTTTTTAAAGAGCTTGTTGGGTTATGGAACAGTTGAAGGAATTTTGTCATAATCTTGATCTTTTAATTCCTTGAACAACAGCTTTGGCAATTGAAAGTAGATGGGACCAAATTAAAAGTA</genome_strand>
        <mrna_strand>CAGACCCATTCCTCAATGAACTGACGAGTATGTTTGAGCGAACTACTGAGCATGGTTCCGTTTGGGTTACGCTCAAACACT............................................................................................CTTCTGATAAATCTAAAGCCCAACGGAATAAGATGAAGACAGCTGGTGAAAATCTTGAATTTAAGTGCCTCATCCGAGCAACTGATGGGAAAAAGAATATTTCCACAATG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGGTGCAAAAGATCACCAGCGTTTCCAAGCATCTTATGCAATTTTGCTGAAGGCCCGCTTGACTGCACTAAAGAAGAGGGAGAGGAAGGACAAGAGGAAGGCTACTGATTCTGACAAAAAGATGGATATTTCGAAAAAGAAATCTGCTGCTGCTAAAGCCTCTACATG-AACTTTAGTACTTTGGTTCATTTCCCCCATTTTGTTTCTAGGATAGAGTTGTAGGATTTGAACCCCGTCCGTTTGGGGCGACAAGTCTGAAACTGCATTACAACATCTGCTGCATAGAATGAAGAAAGGAGGTGTTTTTACTCAAT............................................................TTGAAGAAATTTTGTCATAATCTTGA-CCTTTAATTCCTTGAACAACAGCTTTGGCAATTGAAAGTAGAGGGGACCAAATTAAGAGTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E466329" ref_strand="+" ref_description="SGN-E466329 [cPRO-23-L12]">
      <seq>cagacccattcctcaatgaactgacgagtatgtttgagcgaactactgagcatggttccgtttgggttacgctcaaacactcttctgataaatctaaagcccaacggaataagatgaagacagctggtgaaaatcttgaatttaagtgcctcatccgagcaactgatgggaaaaagaatatttccacaatggttggtgcaaaagatcaccagcgtttccaagcatcttatgcaattttgctgaagggccgcttgactgcactaaagaagaaggagaggaaaggccagaagaagggttctgattctgacaaaaagaaggatatttccaaaaagaaatctggtggtggtaaaacctccacatgaactttaataacttgggtcatttccccccatttggt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0167M06.1" temp_strand="+" temp_description="C06HBa0167M06.1  AC211057.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0167M06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="74538" stop="82968"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="74838" g_stop="74918" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="81" r_length="81" r_score="0.988"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="74919" i_stop="75010" i_length="92">
            <donor d_prob="0.958" d_score="0.98"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="75011" g_stop="75120" g_length="110"/>
          <reference_exon_boundary r_type="cDNA" r_start="82" r_stop="191" r_length="110" r_score="0.991"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="75121" i_stop="82488" i_length="7368">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="82489" g_stop="82694" g_length="206"/>
          <reference_exon_boundary r_type="cDNA" r_start="192" r_stop="397" r_length="206" r_score="0.854"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0167M06.1" gen_strand="+" ref_id="SGN-E466329" ref_strand="+">
        <total_alignment_score>0.919</total_alignment_score>
        <cumulative_length_of_scored_exons>397</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0167M06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E466329" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="74838" e_stop="74918"/>
          <exon e_start="75011" e_stop="75120"/>
          <exon e_start="82489" e_stop="82694"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGACCCATTCCTCAATGAACTGACGAGTATGTTTGAGCGAACTACTGAGCATGGTTCCGTTTGGGTTACGCTTAAACACTGTGAGTTTGCCTCTTCGTTGGTTTTCCTGTGTTTTGTGCTTTGTATTCTCTTTATGAGTAATACTGATTGAGCAATCTTGTCCTTTGTATAGCTTCTGATAAATCTAAAGCCCAACGGAATAAGATGAAGACAGCTGGTGAAACTCTTGAATTTAAGTGCCTCATCCGAGCAACTGATGGGAAAAAGAATATTTCCACAATGGTAATTATCACAATAGAAAGTCTCTTACCTTTTTCCATCACCTTCTTTTTGCAAGTCTTGTCGTTTTCCCCATTTTTTTGCTTTGTTGGGCACTATGTTCTCTGGAACATTGAGGGTGTTAGTTTGTTGTATGAATTATTTTTTAGCATAAGTTTAAATGTGCAAATATAGATAATTCTAGGTCCTGGCCTGTATGTTTGAGATTGAGAGCATCAAATTCAAAAAAAGGATGGTAGCCTTGTGGTGCATAGAGAATGGGAGTCGTGGTCCTTGTTTACTTGATTGATAACTAATAGGTATCGTACATGCTTGTAATACAATATTAGAGCACATAAAGGGACAATTTCTCATAAAAGGCAAACAAATTATGGATGCAACTCTTTTAGTCAGTGAACCTGTGGATTCTAGACTCGAAGGTGAAGATCCAGGGATCATGTGAAACCTAGCTATAGAGAACCCATTATGATCATGTCAACTGGGAGTTACTTCTCAACCTTCTTTAAAAAATGGGTTTTGGTGGAAGATGGTTAAAGTGGATGGTTTTTGTATCAATACTGTCCTGAATTCTAGTCATAGGAGAAATTGCTGGAATTTTCCCTCAGAGAAAGAGGACTCGGGGAGACCCCCCTCTCTTTGCCTTTTCATATTAGCTATGGAAGGTTTCAGTAGTATGATGAGAGGTACTATTCAGAACAGTGGATAAAAGGTTTCAGGATAGGCAATCAAGCAGGGGAAGAGATGTAGATTTCCTTTCATTATTGCTGATGATATAGTTGTTTTCTAAGATGCTAAAGCAGATCAGATCATGTACATCAGAATGATTTTGGTGATCTTTGGGCAATTTTTGGTCCATTTGTAAAATTGGAGGAAAGGTAGTAGTTTCCCTGTCAAAGAAGTTCCACAAATTCAATGCCTGTCCATGTTATAAGTTTCGATGATTTAACAAACTATGACATCTAGTTGGGGACCTGATCCCATGAGGGACTGAGAGTTTCAGGCAATGTGCAAAGGACAGTTGTAAAGCTGCAACTGCTGCCACAATTGCAGTGGTTGGTGCACCTTTTCAGAGGAATAGTACTCAGCCAATGGCGTTGCACTAGGTAGTTTGTCCATCTTATAATAGTCATCTTGTCAAGGGACGTTTCCTAATTTTTGAGTTGAAGATTTCCATACGGCAAAATCCACTCTCAAAAAGAAATATTCTCATATGCATCAAGAGATCTGATCGAGTGATCTACTGTTCCCTTTAGTTGTTATTTTAGTTTATCGTCTCGTGTTTATACAGTGTAAGATCTGTTCATATGTTATAAAGGAATCAGATCATTTCAGTTGTAATCGTTGTTAAAAGTTTGAGTTGTAGCTAGAGTTAGCTATGTCGTGTTCTTGAAGTCTACATTAACTTAGCTTGTTGGCGTAGTAGGCAATAGAGGTATTACTTTGTTTATGAGTAACAAAGCTGTTACGAAAGGAGAAGGGATTAAGAGTTCATTTCCTAGGTTGCAAGAGTTTGTAATCGGGATCTTAACTCTTTGAAGTAATGGAATTGGCGAAATCCTGTGAGACAGGTTGTGATTTTCTCCTTCCTTAAGCAAGGGGGTTAACACGTAAACATTTTGTGTTCTTTATTTTAAGTTTTTCTTTCTGCACTGTTCTTACTATGTGAACGGACTTGGTCCATTGACTTGTGGTGGACGCATGTAAGTCATCAGTCCAACATCTTGAGTTGTAAAATTGAGAATTTCCCGACCAACTTACTTGGGGATGCCCCTTGGAAACAATCATAAGGAGCTAGAAGTTTGGGATGAGATTATTGAAAAAATTAGTAACCAAACTCAAAATGTGTTGAGCGCTCGACTTGCTTTATGTGCGCTTCGGTGTCGTCACCAGTGTTCTAAGACATATTTTTCCTTGCCAATGTGTCTCTGCCGAAGAGGTGACACTAAACAATTGATATTTCACTTAATCACATTTTTTTTGAAAAGGTACTTTATCATTATTTTTTTCGATTTCTTCAGTCATATATTTGTTATTTGTGTTTATAATTATTCGTCTTGGACTCAGCATATATATTTGTAATTTTTTCTCCCTTTGTGCCTTTTTTCATTAAAGCCCATTCTTTGTTTGCACATAAAGGTCCAATGGGCCTTAGAGTTTTTTTGCGCTTTTCGCGTTTGATAACACTTGAAAAACTAGCCAATTGGAAAGCCCGATGTTTATCTCTTGGAGGAAGTAGTACTCTTATGAACTCAGTATTGGACTCATTGCCAACACATGTCATGTCCTTATTTCTAATGCCTTCAGGTGGAGGATACCATACAAGTTGAGGACTTTCTATGTTAGGTAATAAGGAGGGCAGAGGTATTCACTAAGTGAAATGCCAAACTGCTCAGCTTATGGTTGACTTGGTATTAGGAATCTGGGGCTTCAAAACAGATGCTTATTGACAAAATGGAGGTTTGTTGGTGAGGATCATGCACTCTGGAAGGAAGTAACTATAAAAATATGGGCAGAGTAACTATTTGTGTTCTAATATGGTCTATGTTGGCTGGGAATATAGACTGTAGTGTGTGGAATGACACCTAGATCCTTTTTCCGAGAGATAAATGGATTGGACTCGAGCCTTTAATGAGCTCATTTTCGGAACTGTTCTCATTTTGTAGCAACTCTGAAGCATCAATAGTTGACACTCTGGGTGTGTTTGTGTCACGACCCAAACCGGGTTGCGACTGGCACCCACACTTACCCTCCTATGTGAGCGAACCAACCAATCTAAACCTTAACATTTCAATGTAATAACAGTAGAAAATAATGCGGAAGACTTAACTCATTAATAAAATCAATTCAATAACTATCAATATTCAACATCTATTATTCCCAAAACCTGGAAGTCATCATCACAAGAACATCTACGATCAAATGACTAAACTAAGAGTATTCTAAAAGCTAAAAATACATAAGAAGCTAGTCCATGCCGGAAGTTCAAGGCATCAAGACTTGAAGAAGAAGATCCAGTCCAAGCTAGAAGCATTAGCTCACCCTGAATTTCCGATGTAGTAAGACTGGCTTGAATTACTGTTGAGTTGAAGACGATGGCACGTTTGCTGCACTCCACAAATAAACAAGAAGAAAACATAAAAGTAGGGGTCAGTACAAAACACGGGTACTGAGTAGATATCATCGGCCAACTCAAAATAGGGAACAGTATATATCAATATTATCGTAAATCAACTATAAAACTCAACATGTAGCCACAACAAGTATTATAATCATCAATAAGTACCATCAAGTTCATCCATGAGGGCTCAAGCCTCAACACCATACTCATTTGGGAATTATGTTCGTTAGATTGAGTATATTAACATCTTTCAAGATTCATTATCTTTAATTCTCTTGTGTCGGTACGTGACACTCCGATCCCTCATATTCATTATTCCTCTTGTGTCGGTACGTGACACTCTGATCCCCTATATCTACGTGTCGGTTCGTGACACCCGATCCCCTACATCATTCTGTAAATCATCAGGCCTTCTCTATACCAAGGTATCATCAATCCTATTACTTTAATTCATCAAGCCTTCTTCTATACCAAGGCATCATCATTAATAATGTATATTAAAGTTTCCTTTCAAGATTTGGGATTCAATATTTTCATCATGCTTATCTTATCACAATCACATAATCATATTCACGCAAACATACAATTAAGCTTATAGTAGGGTTTACAATACTACCAATACATATCATTCTCTATTAAGAGTTTACTATGAAAGCATGAAAACCATAACCTACCTCCACCGAAGAGTTGAATCAAGCAAGAATTTTCCCAAAGCTTTGTTTCTCCCTTCTCGTTCGATTTTCTCTCTCTCTCTTGTTCTTTCTATTTTCTTTATTCAAACCCTCTTTCTTTTACCCTAATTAGTATATAATTAAGAATAAAAGATGGCAATAATACCCCACTAATTAACTTAGGGTTACCTCTTTTAACCCCTCAAGAATTTGAGTTATTAATATAACCCCACGAACTTTATAATTAAGGCAAGAATAGTCAAAAACGTCCCTTAAAACTTAACCAGAAATCCGACTCTGCCTGGGATTTGCGCAACCTGTGACGGGCCGTCGTGCCTGCGACGGTCCGTCCTGCAGGTCGTCGCAGAGTTCAGAGACCCAAATTTCCACCAAGGGTCTGTGACGGTCCGTCACACCTGTGACGGTCCGTCCTGCCATTCCGTCACAAAGTTCAGAGAGTCGATTTTTAGTACCCAATTTCAGATTTTCTAAGTGTTTTGAAACGAGACCCTGCGACGGTCCCTCGTGCCCTTGACGGTCCGTCGTGGGGTCCGTCGCTTCTGCCAGTTTTTCCAGAATTGAAGTCTGTTGCTCAAAACGACTAAACGGGTCGTTACAGTTTGGTATGGAGGAAAATGTTTTCCATGGAAAATGTTTTCCTAGAAAATGTTTTCCTGGAAAACAAGTAAATTTTGGACTTATTTTCTCATGTTTGGTTGGTGAGTAGAAAATATTTTCTGGATATGATTTTTAGTGTTTGATTTATGAATGAAAAATGTTTTTGAGAGACATTTTTTATTTTTACTAGAGTAAAAAATAATTTATGATATTGAAAATATTTTTCAAAATCAAAATTATTATTTTTTTGGGTGGTGGTGGGGGTGGGGTGGGGGCAGGGCGGGGGGAGGGGGAGGGGATAGGAGTGAAAAAATAAAAATTTGAATTTGATAGTATTTTTAAAAAACAAAATTAATTTTTTTGGGGATTGGGGTGGGTGGGGGCTGGTAGGGGGGCTGGCCGGGAGTGGGGGGGAGGGGTAGGAGTTAAAAAATAAAAAATTTGAAGTTGAAAATATTTTTAAAAAGCAAAATTAATTTTTTGAGGAGGGGTTGGGGTTGGGGTTGGGGGGGGCTGGCCGGGGGTTAGGGTCAAGGATCTGGTGAAAAAATAAAATTTTGAAATTGAAAATATTTATTTAAATTGATGATTTTCCCAAAAAAAAGTAATTTGAAATTGGAGGTGAGTTATGGAAAATGTTTTCCTTAATTTTTGAAGGGAAGTCATTTTCCTTAATTTTGAGGAAAATGAGTTGATTTGGAAATCATTTTCCGAAACTTTTGTCCCAACCAAACATGTGGAAATTGGAAAACATTTTCCAGAAAATGTTTTCCTTCATACCAAACACACTCTCTGTCCCCTCAAGGTGGAATCTCACATTCAGAAGGCACTTGAATGATTGAGAAGTGGGTAGATTTGTTGAGTTATTACAAGTGCTTAGTGGTTTCTTAGGTTTATCTACAGGATCAGACACAATGAGGTGGGAACATGACAGTGATGACTAGTTCTTATTAAGAAGACTCTAGAGAAATGAAGTGGTGGAGCAACCAGGAAGGAGGGGACATACCAGGTCCTTGGAAACAGATTTGGAAGTGCAGTGTCCCAAACAAGGTGCACTTGGTTGGTGACCTGAAGAGCATGTCTCACTGATGAAAAATTGGAAAGGAGGGGCTTTCAGATGGTATCCAGATGTTTTGTTTTTGGGCTAGGAGAATGAAGAAACTAATAATCATCTTTTCTTCATTGGAAGATTGTATCACAGATCTGGTCTGTGTTTCCAAGTATATCTCGAGCAAATTGGGTAACGCCTGAACACATTGCTGACCTACTTAGCTGATGCATAAGGAGTGGAGGGAGGGAACAGAGTCAGAAGGGACGGTAAGATAATACCATATTGCATATAGTGGTCAGTATGGAGAGAAGAAACAACAGATGCTTTGAGGATATCTCTAACCCAATCTAGATAATCAAAGAAAATTGTATGAATATTTTGTATTTTTGATGTAAAGAAAGGGTTTAGAAATAGCAGAGCAGTTAGCAGATATTTTAGGATGTTTGTACATTTCTGAATTTTGCTCACCTGCACATGCAAATACTCTTTGATTTGTTACTTCTTAAAATTGGGAAATTGACAAGGTTTTCCACATGGTACAACACACGGCATGGAGTTTGGGCTGAAACAGCCCGTCATGTATCTAAGAATGTGAGAGCCGCTTTAATATAGAACTTTGGTTGGGTATGTCCGCTAGCTAGCCCTTTCAGTATTTGCGAGTTGCACACTTGTTCTGAATATAGCTCACCTGCACATCCATATACTCCTTTGATTTGTTACTTCTTGAAATTGAGAAATTGACAAGGTTTTCTACATGGTACACATGGCATGAAGTTTGGGCTGACACGGCCCATCACGTGTCTTTAAGAATGTGAACTTCCCTTTAATATAGAACTTTGTCTGGTATGTCTGTTAGCTAGCCCTTTCAGCATTTGCGAGTTGCACAGTTTTGTTCTGAATTCTGCTCACCTGCACATGCAAATATGCTTTGATTAGTTACTTCTTGAAATTGAGAAATTGACAAGGTTTTCCACATGATACACATGACATGAAGTTTTTTAGCTTGTCACTTGTCTAAGAATGTGAATGTGTCTCTTTAATATAGAACTTTGTCTTGTGTATCTGCTAGCTATCCCTTTCAACATTTGTGAGTTGCACACTTCTGTTCTGAATTTTGCTCACCTGCACATGCAAATACTCTTTGATTTGTTACTTCTTGAAATTGAGAAATTGACAAGATTTTTCACATGGTACACATGGCACTAATTTTGGGCTAAAACATCTGGTCATGTTACAAGAATGTGAAATGTCGCTTTAATATAGAACTTTGTCTGGTATGTCTGCTAGCTAGCCCTTTCAGCATTTGCATGTTGCACACTTCTGTTCTAAATTTCGCTCACCTGCACATGCAAATACTGGTTGATTTGTTACTTCTTGAAATTTAGAAATTTACAAGGTTTTCACATGGTACATATTTCATGAAGTATGGGCTGATACAGCCCGTCATGTGTCTAAGAATGTGAACGTCCCTTTAGTATAGAACTTTATCTGGTATGTCTGCTAGTTAGCCCTCCCCCATTTTCCTTCTTGAATGCCTCTCCTCATCCTAAAATGGAGACAAGAACACCAACTTGAATTTTCTTTACTTTAGTAGTCTTTTTTTTTCTTCATCTTGTTTGTGTTCATCTCTTGCTTGTTGCTCTTTTTGATAAGGTAATGTTTTAATTAATGATTGGAGAAATCCCATATACAAGCCATACACCAAAAAATAAAGAATGTAAACCAAAATATTGTTCTCTACGAAAGGAAAACCAATCATCTATAAAACAGGCACCTTATGGGTGGTGTCATCTTATTTGTATTCACGTCTTTGCTTGTTGCTTATGTAGTTTATACAATTGTTGTTTATGTTTTGATGCATCATTTCACTTCTTGTGGCTCTAATGATGCACTTGATTATATTGAACTAACAGGTTGGAGCAAAAGATCACCAGCGTTTCCAAGCATCTTATGCAATTTTGCTGAAGGCCCGGTTGACTGCACTAAAGAAGAGGGAGAGGAAGGACAAGAGGAAGGCTACTGATTCTGACAAAAAGATGGATATTTCGAAAAAGAAATCTGCTGCTGCTAAAGCCTCTACATGAAACTTTAGTCCTTTGGTTTATTCCCCCATTTTGTT</genome_strand>
        <mrna_strand>CAGACCCATTCCTCAATGAACTGACGAGTATGTTTGAGCGAACTACTGAGCATGGTTCCGTTTGGGTTACGCTCAAACACT............................................................................................CTTCTGATAAATCTAAAGCCCAACGGAATAAGATGAAGACAGCTGGTGAAAATCTTGAATTTAAGTGCCTCATCCGAGCAACTGATGGGAAAAAGAATATTTCCACAATG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGGTGCAAAAGATCACCAGCGTTTCCAAGCATCTTATGCAATTTTGCTGAAGGGCCGCTTGACTGCACTAAAGAAGAAGGAGAGGAAAGGCCAGAAGAAGGGTTCTGATTCTGACAAAAAGAAGGATATTTCCAAAAAGAAATCTGGTGGTGGTAAAACCTCCACATGAACTTTAATAACTTGGGTCATTTCCCCCCATTTGGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E246710" ref_strand="+" ref_description="SGN-E246710 [cLEF-45-O22]">
      <seq>cacaaaccgacatatagatttaggggatcggagtgtcacgtaccgacacaagaggattaatgaatattgagggagcggagtgtcacgtaccgacacaagagaaataaagataatgaatcttgaaagatgttaatatactcaatctaatgaacatgattcccaaatgagtatggtattgaggcttgagtcctcatgtgtgaacttgacggtaattgttaatgatatagtatttgttgttgctacatgttgagtatcatagttgattttatgatattacttggtatatatattgatttctattttgagttggccgatgatatctactcagtacccgtgttttgtactgacccctacttttatgttctcttcttgtttatttgtggagtgcagcaaacgtgccatcgtgttcaactcaacagtaattcaagccagtcttactacatcggaaattcagggtgagctaatgcttctagcttggact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0167M06.1" temp_strand="-" temp_description="C06HBa0167M06.1  AC211057.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0167M06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="78907" stop="77831"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="78607" g_stop="78131" g_length="477"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="481" r_length="481" r_score="0.912"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0167M06.1" gen_strand="-" ref_id="SGN-E246710" ref_strand="+">
        <total_alignment_score>0.912</total_alignment_score>
        <cumulative_length_of_scored_exons>477</cumulative_length_of_scored_exons>
        <coverage percentage="0.992" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0167M06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E246710" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="78607" e_stop="78131"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CACGAACCGACACGTAGATATAGGGGATCAGAGTGTCACGTACCGACACAAGAGGAATAATGAATA-TGAGGGATCGGAGTGTCACGTACCGACACAAGAGAATTAAAGATAATGAATCTTGAAAGATGTTAATATACTCAATCTAACGAACATAATTCCCAAATGAGTATGGTGTTGAGGCTTGAGCCCTCATGGATGAACTTGATGGTACTTATTGATGATTATAATACTTGTTGTGGCTACATGTTGAGTTTTATAGTTGA-TTTACGATAATA-TT-G-ATATATACTGTTCCCTATTTTGAGTTGGCCGATGATATCTACTCAGTACCCGTGTTTTGTACTGACCCCTACTTTTATGTTTTCTTCTTGTTTATTTGTGGAGTGCAGCAAACGTGCCATCGTCTTCAACTCAACAGTAATTCAAGCCAGTCTTACTACATCGGAAATTCAGGGTGAGCTAATGCTTCTAGCTTGGACT</genome_strand>
        <mrna_strand>CACAAACCGACATATAGATTTAGGGGATCGGAGTGTCACGTACCGACACAAGAGGATTAATGAATATTGAGGGAGCGGAGTGTCACGTACCGACACAAGAGAAATAAAGATAATGAATCTTGAAAGATGTTAATATACTCAATCTAATGAACATGATTCCCAAATGAGTATGGTATTGAGGCTTGAGTCCTCATGTGTGAACTTGACGGTAATTGTTAATGA-TATAGTATTTGTTGTTGCTACATGTTGAGTATCATAGTTGATTTTATGATATTACTTGGTATATATATTGATTTCTATTTTGAGTTGGCCGATGATATCTACTCAGTACCCGTGTTTTGTACTGACCCCTACTTTTATGTTCTCTTCTTGTTTATTTGTGGAGTGCAGCAAACGTGCCATCGTGTTCAACTCAACAGTAATTCAAGCCAGTCTTACTACATCGGAAATTCAGGGTGAGCTAATGCTTCTAGCTTGGACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E257644" ref_strand="+" ref_description="SGN-E257644 [cLEG-39-C5]">
      <seq>actaaagggacgttcacattcttagacacatgacgggctgtatcagcccatacttcatgaaatatgtaccatgtgaaaaccttgtaaatttctaaatttcaagaagtaacaaatcaaccagtatttgcatgtgcaggtgagcgaaatttagaacagaagtgtgcaacatgcaaatgctgaaagggctagctaacagacataccagacaaagttctatattaaagggaagttcacattcttaaagacacgtgatgggccgtgtcagcccaaacttcatgccatgtgtaccatgtagaaaaccttgtcaatttctcaatttcaagaagtaacaaatcaaaggagtatatggatgtgcaggtgagctatattcagaacaagtgtgcaactcgcaaatactgaaagggctagctagcggacatacccaaccaaagttctatattaaagcggctctcacattcttagatacatgacgggctgtttcagcccaaactccatgccgggtgttgtaccatgtggaaaaccttgtcaatttcccaattttaagaagtaacaaaataaagaatatttgcttgtgcagcaaacgtgccatcggttttaactcaaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0167M06.1" temp_strand="-" temp_description="C06HBa0167M06.1  AC211057.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0167M06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="82351" stop="77894"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82051" g_stop="81868" g_length="184"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="184" r_length="184" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81867" i_stop="81437" i_length="431">
            <donor d_prob="0.803" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81436" g_stop="81044" g_length="393"/>
          <reference_exon_boundary r_type="cDNA" r_start="185" r_stop="577" r_length="393" r_score="0.987"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="81043" i_stop="78222" i_length="2822">
            <donor d_prob="0.907" d_score="0.92"/>
            <acceptor a_prob="0.965" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="78221" g_stop="78194" g_length="28"/>
          <reference_exon_boundary r_type="cDNA" r_start="578" r_stop="605" r_length="28" r_score="0.893"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0167M06.1" gen_strand="-" ref_id="SGN-E257644" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>605</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0167M06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E257644" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82051" e_stop="81868"/>
          <exon e_start="81436" e_stop="81044"/>
          <exon e_start="78221" e_stop="78194"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACTAAAGGGACGTTCACATTCTTAGACACATGACGGGCTGTATCAGCCCATACTTCATGAAATATGTACCATGTGAAAACCTTGTAAATTTCTAAATTTCAAGAAGTAACAAATCAACCAGTATTTGCATGTGCAGGTGAGCGAAATTTAGAACAGAAGTGTGCAACATGCAAATGCTGAAAGGGCTAGCTAGCAGACATACCAGACAAAGTTCTATATTAAAGCGACATTTCACATTCTTGTAACATGACCAGATGTTTTAGCCCAAAATTAGTGCCATGTGTACCATGTGAAAAATCTTGTCAATTTCTCAATTTCAAGAAGTAACAAATCAAAGAGTATTTGCATGTGCAGGTGAGCAAAATTCAGAACAGAAGTGTGCAACTCACAAATGTTGAAAGGGATAGCTAGCAGATACACAAGACAAAGTTCTATATTAAAGAGACACATTCACATTCTTAGACAAGTGACAAGCTAAAAAACTTCATGTCATGTGTATCATGTGGAAAACCTTGTCAATTTCTCAATTTCAAGAAGTAACTAATCAAAGCATATTTGCATGTGCAGGTGAGCAGAATTCAGAACAAAACTGTGCAACTCGCAAATGCTGAAAGGGCTAGCTAACAGACATACCAGACAAAGTTCTATATTAAAGGGAAGTTCACATTCTTAAAGACACGTGATGGGCCGTGTCAGCCCAAACTTCATGCCATGTGTACCATGTAGAAAACCTTGTCAATTTCTCAATTTCAAGAAGTAACAAATCAAAGGAGTATATGGATGTGCAGGTGAGCTATATTCAGAACAAGTGTGCAACTCGCAAATACTGAAAGGGCTAGCTAGCGGACATACCCAACCAAAGTTCTATATTAAAGCGGCTCTCACATTCTTAGATACATGACGGGCTGTTTCAGCCCAAACTCCATGCCGTGTGTTGTACCATGTGGAAAACCTTGTCAATTTCCCAATTTTAAGAAGTAACAAATCAAAGAGTATTTGCATGTGCAGGTGAGCAAAATTCAGAAATGTACAAACATCCTAAAATATCTGCTAACTGCTCTGCTATTTCTAAACCCTTTCTTTACATCAAAAATACAAAATATTCATACAATTTTCTTTGATTATCTAGATTGGGTTAGAGATATCCTCAAAGCATCTGTTGTTTCTTCTCTCCATACTGACCACTATATGCAATATGGTATTATCTTACCGTCCCTTCTGACTCTGTTCCCTCCCTCCACTCCTTATGCATCAGCTAAGTAGGTCAGCAATGTGTTCAGGCGTTACCCAATTTGCTCGAGATATACTTGGAAACACAGACCAGATCTGTGATACAATCTTCCAATGAAGAAAAGATGATTATTAGTTTCTTCATTCTCCTAGCCCAAAAACAAAACATCTGGATACCATCTGAAAGCCCCTCCTTTCCAATTTTTCATCAGTGAGACATGCTCTTCAGGTCACCAACCAAGTGCACCTTGTTTGGGACACTGCACTTCCAAATCTGTTTCCAAGGACCTGGTATGTCCCCTCCTTCCTGGTTGCTCCACCACTTCATTTCTCTAGAGTCTTCTTAATAAGAACTAGTCATCACTGTCATGTTCCCACCTCATTGTGTCTGATCCTGTAGATAAACCTAAGAAACCACTAAGCACTTGTAATAACTCAACAAATCTACCCACTTCTCAATCATTCAAGTGCCTTCTGAATGTGAGATTCCACCTTGAGGGGACAGAGAGTGTGTTTGGTATGAAGGAAAACATTTTCTGGAAAATGTTTTCCAATTTCCACATGTTTGGTTGGGACAAAAGTTTCGGAAAATGATTTCCAAATCAACTCATTTTCCTCAAAATTAAGGAAAATGACTTCCCTTCAAAAATTAAGGAAAACATTTTCCATAACTCACCTCCAATTTCAAATTACTTTTTTTTGGGAAAATCATCAATTTAAATAAATATTTTCAATTTCAAAATTTTATTTTTTCACCAGATCCTTGACCCTAACCCCCGGCCAGCCCCCCCCAACCCCAACCCCAACCCCTCCTCAAAAAATTAATTTTGCTTTTTAAAAATATTTTCAACTTCAAATTTTTTATTTTTTAACTCCTACCCCTCCCCCCCACTCCCGGCCAGCCCCCCTACCAGCCCCCACCCACCCCAATCCCCAAAAAAATTAATTTTGTTTTTTAAAAATACTATCAAATTCAAATTTTTATTTTTTCACTCCTATCCCCTCCCCCTCCCCCCGCCCTGCCCCCACCCCACCCCCACCACCACCCAAAAAAATAATAATTTTGATTTTGAAAAATATTTTCAATATCATAAATTATTTTTTACTCTAGTAAAAATAAAAAATGTCTCTCAAAAACATTTTTCATTCATAAATCAAACACTAAAAATCATATCCAGAAAATATTTTCTACTCACCAACCAAACATGAGAAAATAAGTCCAAAATTTACTTGTTTTCCAGGAAAACATTTTCTAGGAAAACATTTTCCATGGAAAACATTTTCCTCCATACCAAACTGTAACGACCCGTTTAGTCGTTTTGAGCAACAGACTTCAATTCTGGAAAAACTGGCAGAAGCGACGGACCCCACGACGGACCGTCAAGGGCACGAGGGACCGTCGCAGGGTCTCGTTTCAAAACACTTAGAAAATCTGAAATTGGGTACTAAAAATCGACTCTCTGAACTTTGTGACGGAATGGCAGGACGGACCGTCACAGGTGTGACGGACCGTCACAGACCCTTGGTGGAAATTTGGGTCTCTGAACTCTGCGACGACCTGCAGGACGGACCGTCGCAGGCACGACGGCCCGTCACAGGTTGCGCAAATCCCAGGCAGAGTCGGATTTCTGGTTAAGTTTTAAGGGACGTTTTTGACTATTCTTGCCTTAATTATAAAGTTCGTGGGGTTATATTAATAACTCAAATTCTTGAGGGGTTAAAAGAGGTAACCCTAAGTTAATTAGTGGGGTATTATTGCCATCTTTTATTCTTAATTATATACTAATTAGGGTAAAAGAAAGAGGGTTTGAATAAAGAAAATAGAAAGAACAAGAGAGAGAGAGAAAATCGAACGAGAAGGGAGAAACAAAGCTTTGGGAAAATTCTTGCTTGATTCAACTCTTCGGTGGAGGTAGGTTATGGTTTTCATGCTTTCATAGTAAACTCTTAATAGAGAATGATATGTATTGGTAGTATTGTAAACCCTACTATAAGCTTAATTGTATGTTTGCGTGAATATGATTATGTGATTGTGATAAGATAAGCATGATGAAAATATTGAATCCCAAATCTTGAAAGGAAACTTTAATATACATTATTAATGATGATGCCTTGGTATAGAAGAAGGCTTGATGAATTAAAGTAATAGGATTGATGATACCTTGGTATAGAGAAGGCCTGATGATTTACAGAATGATGTAGGGGATCGGGTGTCACGAACCGACACGTAGATATAGGGGATCAGAGTGTCACGTACCGACACAAGAGGAATAATGAATATGAGGGATCGGAGTGTCACGTACCGACACAAGAGAATTAAAGATAATGAATCTTGAAAGATGTTAATATACTCAATCTAACGAACATAATTCCCAAATGAGTATGGTGTTGAGGCTTGAGCCCTCATGGATGAACTTGATGGTACTTATTGATGATTATAATACTTGTTGTGGCTACATGTTGAGTTTTATAGTTGATTTACGATAATATTGATATATACTGTTCCCTATTTTGAGTTGGCCGATGATATCTACTCAGTACCCGTGTTTTGTACTGACCCCTACTTTTATGTTTTCTTCTTGTTTATTTGTGGAGTGCAGCAAACGTGCCATCGTCTTCAACTCAACA</genome_strand>
        <mrna_strand>ACTAAAGGGACGTTCACATTCTTAGACACATGACGGGCTGTATCAGCCCATACTTCATGAAATATGTACCATGTGAAAACCTTGTAAATTTCTAAATTTCAAGAAGTAACAAATCAACCAGTATTTGCATGTGCAGGTGAGCGAAATTTAGAACAGAAGTGTGCAACATGCAAATGCTGAAAGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................GCTAGCTAACAGACATACCAGACAAAGTTCTATATTAAAGGGAAGTTCACATTCTTAAAGACACGTGATGGGCCGTGTCAGCCCAAACTTCATGCCATGTGTACCATGTAGAAAACCTTGTCAATTTCTCAATTTCAAGAAGTAACAAATCAAAGGAGTATATGGATGTGCAGGTGAGCTATATTCAGAACAAGTGTGCAACTCGCAAATACTGAAAGGGCTAGCTAGCGGACATACCCAACCAAAGTTCTATATTAAAGCGGCTCTCACATTCTTAGATACATGACGGGCTGTTTCAGCCCAAACTCCATGCCGGGTGTTGTACCATGTGGAAAACCTTGTCAATTTCCCAATTTTAAGAAGTAACAAAATAAAGAATATTTGCTTGTGCAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAACGTGCCATCGGTTTTAACTCAACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E297448" ref_strand="+" ref_description="SGN-E297448 [cLEW-13-J3]">
      <seq>aagtttcatacttgtcgccccaaatggatggggttcaaatgctaccaactctatcctagaaacaaaatgggggaataaaccaaaggactaaagtttcatgtagaggctttagcagcagcagatttctttttcgaaatatccatctttttgtcagaatcagtagccttcctcttgtccttcctctccctcttctttagtgcaggcaaccgggccttcagcaaaattgcataagatgcttggaaacgctggtgatcttttgctcccacctgttagttcaatataatcaagtgcatcattagagccacaagaagtgaaatgatgcatcaaaacataaacaacaattgtataaactacataagcaacaagcaaagacgtgaatacaaataagatgacaccacccataaggtgagcgaaatttataacagaagtgtgcaacatgcaaatgctgaaagggctagctagcagacataccagacaaagttctatattaaagcgacatttcacattcttgtaacatgaccagatgtttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0167M06.1" temp_strand="-" temp_description="C06HBa0167M06.1  AC211057.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0167M06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="83053" stop="81491"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82753" g_stop="82350" g_length="404"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="405" r_length="405" r_score="0.985"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82349" i_stop="81916" i_length="434">
            <donor d_prob="0.774" d_score="1.00"/>
            <acceptor a_prob="0.988" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81915" g_stop="81791" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="406" r_stop="530" r_length="125" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0167M06.1" gen_strand="-" ref_id="SGN-E297448" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>529</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0167M06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E297448" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82753" e_stop="82350"/>
          <exon e_start="81915" e_stop="81791"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGTTTCAGACTTGTCGCCCCAAATGGATGGGGTTCAAATCCTA-CAACTCTATCCTAGAAACAAAATGGGGGAATAAACCAAAGGACTAAAGTTTCATGTAGAGGCTTTAGCAGCAGCAGATTTCTTTTTCGAAATATCCATCTTTTTGTCAGAATCAGTAGCCTTCCTCTTGTCCTTCCTCTCCCTCTTCTTTAGTGCAGTCAACCGGGCCTTCAGCAAAATTGCATAAGATGCTTGGAAACGCTGGTGATCTTTTGCTCCAACCTGTTAGTTCAATATAATCAAGTGCATCATTAGAGCCACAAGAAGTGAAATGATGCATCAAAACATAAACAACAATTGTATAAACTACATAAGCAACAAGCAAAGACGTGAATACAAATAAGATGACACCACCCATAAGGTGCCTGTTTTATAGATGATTGGTTTTCCTTTCGTAGAGAACAATATTTTGGTTTACATTCTTTATTTTTTGGTGTATGGCTTGTATATGGGATTTCTCCAATCATTAATTAAAACATTACCTTATCAAAAAGAGCAACAAGCAAGAGATGAACACAAACAAGATGAAGAAAAAAAAAGACTACTAAAGTAAAGAAAATTCAAGTTGGTGTTCTTGTCTCCATTTTAGGATGAGGAGAGGCATTCAAGAAGGAAAATGGGGGAGGGCTAACTAGCAGACATACCAGATAAAGTTCTATACTAAAGGGACGTTCACATTCTTAGACACATGACGGGCTGTATCAGCCCATACTTCATGAAATATGTACCATGTGAAAACCTTGTAAATTTCTAAATTTCAAGAAGTAACAAATCAACCAGTATTTGCATGTGCAGGTGAGCGAAATTTAGAACAGAAGTGTGCAACATGCAAATGCTGAAAGGGCTAGCTAGCAGACATACCAGACAAAGTTCTATATTAAAGCGACATTTCACATTCTTGTAACATGACCAGATGTTTT</genome_strand>
        <mrna_strand>AAGTTTCATACTTGTCGCCCCAAATGGATGGGGTTCAAATGCTACCAACTCTATCCTAGAAACAAAATGGGGGAATAAACCAAAGGACTAAAGTTTCATGTAGAGGCTTTAGCAGCAGCAGATTTCTTTTTCGAAATATCCATCTTTTTGTCAGAATCAGTAGCCTTCCTCTTGTCCTTCCTCTCCCTCTTCTTTAGTGCAGGCAACCGGGCCTTCAGCAAAATTGCATAAGATGCTTGGAAACGCTGGTGATCTTTTGCTCCCACCTGTTAGTTCAATATAATCAAGTGCATCATTAGAGCCACAAGAAGTGAAATGATGCATCAAAACATAAACAACAATTGTATAAACTACATAAGCAACAAGCAAAGACGTGAATACAAATAAGATGACACCACCCATAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAGCGAAATTTATAACAGAAGTGTGCAACATGCAAATGCTGAAAGGGCTAGCTAGCAGACATACCAGACAAAGTTCTATATTAAAGCGACATTTCACATTCTTGTAACATGACCAGATGTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E619540" ref_strand="-" ref_description="SGN-E619540 [70231]">
      <seq>gcacatgcaaatactgtttgatttgttacttcttgaaatttagaaattgacaaggtttttcacatggtacacatgtcatgaagtttggnctgagcccatcatgtgtctaagaatgtgaacgtccctttagtatagaactttgtctggttggagcaaaagatcaccagcgtttccaagcatcttatgcaattttgctgaaggcccggttgactgcactaaagaagagggagaggaaggacaagaggaaggctactgattctgacaaaaagatggatatttccaaaaagaaatctgctgctgctaaagcctctacatgaactttagtcctttggtttattcccccattttgtttctaggatagagttgtaggatttgaaccccgtccgtttggggcgacaagtctgaaacttcattacaactccaactgcatagaatgaagaaaggaggtgtttttactcaatttgatttttcacatctaaattagtcaaacttttntaaaggaagcttgttgggttttggaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0167M06.1" temp_strand="+" temp_description="C06HBa0167M06.1  AC211057.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0167M06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="81187" stop="83162"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81918" g_stop="82066" g_length="149"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="146" r_length="146" r_score="0.906"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82067" i_stop="82488" i_length="422">
            <donor d_prob="0.892" d_score="0.96"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82489" g_stop="82868" g_length="380"/>
          <reference_exon_boundary r_type="cDNA" r_start="147" r_stop="529" r_length="383" r_score="0.950"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0167M06.1" gen_strand="+" ref_id="SGN-E619540" ref_strand="-">
        <total_alignment_score>0.938</total_alignment_score>
        <cumulative_length_of_scored_exons>529</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0167M06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E619540" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="81918" e_stop="82066"/>
          <exon e_start="82489" e_stop="82868"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCACATGCAAATACTGGTTGATTTGTTACTTCTTGAAATTTAGAAATTTACAAGG-TTTTCACATGGTACATATTTCATGAAGTATGGGCTGATACAGCCCGTCATGTGTCTAAGAATGTGAACGTCCCTTTAGTATAGAACTTTATCTGGTATGTCTGCTAGTTAGCCCTCCCCCATTTTCCTTCTTGAATGCCTCTCCTCATCCTAAAATGGAGACAAGAACACCAACTTGAATTTTCTTTACTTTAGTAGTCTTTTTTTTTCTTCATCTTGTTTGTGTTCATCTCTTGCTTGTTGCTCTTTTTGATAAGGTAATGTTTTAATTAATGATTGGAGAAATCCCATATACAAGCCATACACCAAAAAATAAAGAATGTAAACCAAAATATTGTTCTCTACGAAAGGAAAACCAATCATCTATAAAACAGGCACCTTATGGGTGGTGTCATCTTATTTGTATTCACGTCTTTGCTTGTTGCTTATGTAGTTTATACAATTGTTGTTTATGTTTTGATGCATCATTTCACTTCTTGTGGCTCTAATGATGCACTTGATTATATTGAACTAACAGGTTGGAGCAAAAGATCACCAGCGTTTCCAAGCATCTTATGCAATTTTGCTGAAGGCCCGGTTGACTGCACTAAAGAAGAGGGAGAGGAAGGACAAGAGGAAGGCTACTGATTCTGACAAAAAGATGGATATTTCGAAAAAGAAATCTGCTGCTGCTAAAGCCTCTACATGAAACTTTAGTCCTTTGGTTTATTCCCCCATTTTGTTTCTAGGATAGAGTTGTAGGATTTGAACCCCATCCATTTGGGGCGACAAGTCTGAAACTTCATTACAACTCC-ACTGCATAGAATGAAGAAAGGAGGTGTTTTTACTCAATTTGATTATTCACATCTAAATTAGTCAAACTTTT-TAAA-G-AGCTTGTTGGGTTATGGAACAGTTGAA</genome_strand>
        <mrna_strand>GCACATGCAAATACTGTTTGATTTGTTACTTCTTGAAATTTAGAAATTGACAAGGTTTTTCACATGGTACACATGTCATGAAGTTTGGNCTGA----GCCCATCATGTGTCTAAGAATGTGAACGTCCCTTTAGTATAGAACTTTGTCTG......................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGGAGCAAAAGATCACCAGCGTTTCCAAGCATCTTATGCAATTTTGCTGAAGGCCCGGTTGACTGCACTAAAGAAGAGGGAGAGGAAGGACAAGAGGAAGGCTACTGATTCTGACAAAAAGATGGATATTTCCAAAAAGAAATCTGCTGCTGCTAAAGCCTCTACATG-AACTTTAGTCCTTTGGTTTATTCCCCCATTTTGTTTCTAGGATAGAGTTGTAGGATTTGAACCCCGTCCGTTTGGGGCGACAAGTCTGAAACTTCATTACAACTCCAACTGCATAGAATGAAGAAAGGAGGTGTTTTTACTCAATTTGATTTTTCACATCTAAATTAGTCAAACTTTTNTAAAGGAAGCTTGTTGGGTTTTGGAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E357811" ref_strand="-" ref_description="SGN-E357811 [cTOS-24-A8]">
      <seq>caaaaagatcaccagcgtttccaagcatcttatgcaattttgctgaaggccccggttgactgcactaaagaagagggagaggaaggacaaagaggaagggctactgattctgacaaaaaagatggatattcgaaaaaagaaatctgctgctgctaaagcctctacatgaaactttagtcctttggtttattcccccattttgtttctaggatagagttgtaggatttgaaccccatccatttggggcgacaagtctgaaacttcattacaactccactgcatagaatgaagaaaggaggtgtttttactcaatttgattattcacatctaaattagtcaaactttttaaagagcttgttgggttatggaacagttgaaggaattttgtcataaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0167M06.1" temp_strand="+" temp_description="C06HBa0167M06.1  AC211057.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0167M06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="82197" stop="83183"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82495" g_stop="82882" g_length="388"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="392" r_length="392" r_score="0.966"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="393" polyA_stop="408"/>
      <MATCH_line gen_id="C06HBa0167M06.1" gen_strand="+" ref_id="SGN-E357811" ref_strand="-">
        <total_alignment_score>0.966</total_alignment_score>
        <cumulative_length_of_scored_exons>388</cumulative_length_of_scored_exons>
        <coverage percentage="0.951" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0167M06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E357811" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="82495" e_stop="82882"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAAAAGATCACCAGCGTTTCCAAGCATCTTATGCAATTTTGCTGAAGG-CCCGGTTGACTGCACTAAAGAAGAGGGAGAGGAAGGAC-AAGAGGAA-GGCTACTGATTCTGAC-AAAAAGATGGATATTTCGAAAAAGAAATCTGCTGCTGCTAAAGCCTCTACATGAAACTTTAGTCCTTTGGTTTATTCCCCCATTTTGTTTCTAGGATAGAGTTGTAGGATTTGAACCCCATCCATTTGGGGCGACAAGTCTGAAACTTCATTACAACTCCACTGCATAGAATGAAGAAAGGAGGTGTTTTTACTCAATTTGATTATTCACATCTAAATTAGTCAAACTTTTTAAAGAGCTTGTTGGGTTATGGAACAGTTGAAGGAATTTTGTCATA</genome_strand>
        <mrna_strand>CAAAAAGATCACCAGCGTTTCCAAGCATCTTATGCAATTTTGCTGAAGGCCCCGGTTGACTGCACTAAAGAAGAGGGAGAGGAAGGACAAAGAGGAAGGGCTACTGATTCTGACAAAAAAGATGGATATTCGAAAAAAGAAATCTGCTGCTGCTAAAGCCTCTACATGAAACTTTAGTCCTTTGGTTTATTCCCCCATTTTGTTTCTAGGATAGAGTTGTAGGATTTGAACCCCATCCATTTGGGGCGACAAGTCTGAAACTTCATTACAACTCCACTGCATAGAATGAAGAAAGGAGGTGTTTTTACTCAATTTGATTATTCACATCTAAATTAGTCAAACTTTTTAAAGAGCTTGTTGGGTTATGGAACAGTTGAAGGAATTTTGTCATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E540364" ref_strand="+" ref_description="SGN-E540364 [TUS-60-J15]">
      <seq>atgcaattttgctgaaggcccggttgactgcactaaagaagagggagaggaaggacaagaggaaggctactgattctgacaaaaagatggatatttcgaaaaagaaatctgctgctgctaaagcctctacatgaaactttagtcctttggtttattcccccattttgtttctaggatagagttgtaggatttgaaccccatccatttggggcgacaagtctgaaacttcattacaactccactg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0167M06.1" temp_strand="+" temp_description="C06HBa0167M06.1  AC211057.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0167M06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="82226" stop="83069"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82526" g_stop="82769" g_length="244"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="244" r_length="244" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0167M06.1" gen_strand="+" ref_id="SGN-E540364" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>244</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0167M06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E540364" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82526" e_stop="82769"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGCAATTTTGCTGAAGGCCCGGTTGACTGCACTAAAGAAGAGGGAGAGGAAGGACAAGAGGAAGGCTACTGATTCTGACAAAAAGATGGATATTTCGAAAAAGAAATCTGCTGCTGCTAAAGCCTCTACATGAAACTTTAGTCCTTTGGTTTATTCCCCCATTTTGTTTCTAGGATAGAGTTGTAGGATTTGAACCCCATCCATTTGGGGCGACAAGTCTGAAACTTCATTACAACTCCACTG</genome_strand>
        <mrna_strand>ATGCAATTTTGCTGAAGGCCCGGTTGACTGCACTAAAGAAGAGGGAGAGGAAGGACAAGAGGAAGGCTACTGATTCTGACAAAAAGATGGATATTTCGAAAAAGAAATCTGCTGCTGCTAAAGCCTCTACATGAAACTTTAGTCCTTTGGTTTATTCCCCCATTTTGTTTCTAGGATAGAGTTGTAGGATTTGAACCCCATCCATTTGGGGCGACAAGTCTGAAACTTCATTACAACTCCACTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E397222" ref_strand="+" ref_description="SGN-E397222 [TUS-45-C7]">
      <seq>tcaatttttttttaaaaattaatgataaatttttcttcaagaattttgttgattttgttattaacatgtactatagctataattataattccaaaattggcttctacacaatattgtggatgtacagaaggattgtgttgcagtagatggggttattgtggcagtggaaaagcttattgtggacaaggttgtcaaggagggccttgttataattcttcaaccaaaaattacaatcataatattaataacaataataataataataccgatacagtttctgatattgatagtgaatcatttttcaatggaattgccaatcacgctgcttcaaattgtgaaggcaagggatttta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0167M06.1" temp_strand="+" temp_description="C06HBa0167M06.1  AC211057.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0167M06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="84244" stop="85196"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="84544" g_stop="84896" g_length="353"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="353" r_length="353" r_score="0.977"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0167M06.1" gen_strand="+" ref_id="SGN-E397222" ref_strand="+">
        <total_alignment_score>0.977</total_alignment_score>
        <cumulative_length_of_scored_exons>353</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0167M06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E397222" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="84544" e_stop="84896"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAATTTTTTTTTAAAAAAAAATGATAAATTTTTCTTCAAGAATTTTGTTGATTTTGTTATTAACATGTACTATAGCTATAATTATAATTCCAAAATTGGCTTCTACACAATATTGTGGATGTACAGAAGGATTGTGTTGCAGTAGATGGGGTTATTGTGGCAGTGGAAAAGCTTATTGTGGACAAGGTTGTCAAGGAGGGCCTTGTTATAATTCTTCAACCAAAAATTACAATCATAATATTAATAACAATAATAATAATAATACCAATAGAGTTTCTGATATTGTTAGTGAATCATTTTTCAATGGAATTGCAAATCAAGCTGCTTCAAATTGTGAAGGCAAAGGATTTTA</genome_strand>
        <mrna_strand>TCAATTTTTTTTTAAAAATTAATGATAAATTTTTCTTCAAGAATTTTGTTGATTTTGTTATTAACATGTACTATAGCTATAATTATAATTCCAAAATTGGCTTCTACACAATATTGTGGATGTACAGAAGGATTGTGTTGCAGTAGATGGGGTTATTGTGGCAGTGGAAAAGCTTATTGTGGACAAGGTTGTCAAGGAGGGCCTTGTTATAATTCTTCAACCAAAAATTACAATCATAATATTAATAACAATAATAATAATAATACCGATACAGTTTCTGATATTGATAGTGAATCATTTTTCAATGGAATTGCCAATCACGCTGCTTCAAATTGTGAAGGCAAGGGATTTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E289693" ref_strand="+" ref_description="SGN-E289693 [cLET-4-G23]">
      <seq>caatttttttttaaaaaaaaatgataaatttttcttcaagaattttgttgattttgttattaacatgtactatagctataattataattccaaaattggcttctacacaatattgtggatgtacagaaggattgtgttgcagtagatggggttattgtggcagtggaaaagcttattgtggacaaggttgtcaaggagggccttgttataattcttcaaccaaaaattacaatcataatattaataacaataataataataataccaatagagtttctgatattgttagtgaatcatttttcaatggaattgcaaatcaagctgcttcaaattgtgaaggcaaaggattttacacgagatctgtatttcttgaagctttaaagtcttatcctgaattcgcaactatcggtttttctgatgatgataataagcgcgaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0167M06.1" temp_strand="+" temp_description="C06HBa0167M06.1  AC211057.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0167M06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="84245" stop="85282"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="84545" g_stop="84982" g_length="438"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="438" r_length="438" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0167M06.1" gen_strand="+" ref_id="SGN-E289693" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>438</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0167M06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E289693" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="84545" e_stop="84982"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAATTTTTTTTTAAAAAAAAATGATAAATTTTTCTTCAAGAATTTTGTTGATTTTGTTATTAACATGTACTATAGCTATAATTATAATTCCAAAATTGGCTTCTACACAATATTGTGGATGTACAGAAGGATTGTGTTGCAGTAGATGGGGTTATTGTGGCAGTGGAAAAGCTTATTGTGGACAAGGTTGTCAAGGAGGGCCTTGTTATAATTCTTCAACCAAAAATTACAATCATAATATTAATAACAATAATAATAATAATACCAATAGAGTTTCTGATATTGTTAGTGAATCATTTTTCAATGGAATTGCAAATCAAGCTGCTTCAAATTGTGAAGGCAAAGGATTTTACACGAGATCTGTATTTCTTGAAGCTTTAAAGTCTTATCCTGAATTCGCAACTATCGGTTTTTCTGATGATGATAATAAGCGCGAAA</genome_strand>
        <mrna_strand>CAATTTTTTTTTAAAAAAAAATGATAAATTTTTCTTCAAGAATTTTGTTGATTTTGTTATTAACATGTACTATAGCTATAATTATAATTCCAAAATTGGCTTCTACACAATATTGTGGATGTACAGAAGGATTGTGTTGCAGTAGATGGGGTTATTGTGGCAGTGGAAAAGCTTATTGTGGACAAGGTTGTCAAGGAGGGCCTTGTTATAATTCTTCAACCAAAAATTACAATCATAATATTAATAACAATAATAATAATAATACCAATAGAGTTTCTGATATTGTTAGTGAATCATTTTTCAATGGAATTGCAAATCAAGCTGCTTCAAATTGTGAAGGCAAAGGATTTTACACGAGATCTGTATTTCTTGAAGCTTTAAAGTCTTATCCTGAATTCGCAACTATCGGTTTTTCTGATGATGATAATAAGCGCGAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E322260" ref_strand="+" ref_description="SGN-E322260 [cTOB-24-P12]">
      <seq>gttgcagtagatggggttattgtggcagtggaaaagcttattgtggacaaggttgtcaaggagggccttgttataattcttcaaccaaaaattacaatcataatattaataacaataataataataataccaatagagtttctgatattgttagtgaatcatttttcaatggaattgcaaatcaagctgcttcaaattgtgaaggcaaaggattttacacgagatctgtatttcttgaagctttaaagtcttatcctgaattcgcaactatcggtttttctgatgatgataataagcgcgaaattgctgctttctttgctcatgtcacacatgagaccggacaaatgtgttacataaatgagataaatggttcatctagggactattgtgacatgacaaactcagagtacccctgtgtttctggccaaaattattatggtagaggaccaatacaactatcatggaacttcaactatggtcctgctggaaaagacatcggattcgatgggcttaacgaccccgatattgtgtctagagacagtttaatatcattcaaaactgccctgtggtactggatgaacacttgccaacctctcttaagttctgggcaaggtttcggggcaacgattcgagctattaatggtcctcttga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0167M06.1" temp_strand="+" temp_description="C06HBa0167M06.1  AC211057.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0167M06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="84380" stop="86236"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="84680" g_stop="85021" g_length="342"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="342" r_length="342" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="85022" i_stop="85626" i_length="605">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="85627" g_stop="85936" g_length="310"/>
          <reference_exon_boundary r_type="cDNA" r_start="343" r_stop="652" r_length="310" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0167M06.1" gen_strand="+" ref_id="SGN-E322260" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>652</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0167M06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E322260" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="84680" e_stop="85021"/>
          <exon e_start="85627" e_stop="85936"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTGCAGTAGATGGGGTTATTGTGGCAGTGGAAAAGCTTATTGTGGACAAGGTTGTCAAGGAGGGCCTTGTTATAATTCTTCAACCAAAAATTACAATCATAATATTAATAACAATAATAATAATAATACCAATAGAGTTTCTGATATTGTTAGTGAATCATTTTTCAATGGAATTGCAAATCAAGCTGCTTCAAATTGTGAAGGCAAAGGATTTTACACGAGATCTGTATTTCTTGAAGCTTTAAAGTCTTATCCTGAATTCGCAACTATCGGTTTTTCTGATGATGATAATAAGCGCGAAATTGCTGCTTTCTTTGCTCATGTCACACATGAGACCGGACGTGAGTCATTTTTCTTAAATTTTTATATCATATGCTTAATTTTAGTATCTATCTTTGTTTTTTTTTTTATATAAAAAAAAAACACTTTTCTTGGATTCTTCATGTGATATGTCTTGTCAATTATGAACCATCTAACTATATGAGTATTAAACTTAATATTTTATATATTCTAGGAAAAATGTACAAGTATTTCCTAGATTATGATCGAAATTTCTGAGACATATCTTAACTAAATTCATATCTTAACTAAAATAAGGTCCTGTTACTCTCATTAACTTATTTTTTTGGTAATTTTATGCACTTTTTGGCTTACGTCGCATCAAAACATCTCTCACGCACCTCAATTGCGTGGAGTCACGGAGTGTGCCACGTAAGACAAAAGGTGCACAAAAATTACAAAAAGATAAGTTTAGGAAGGTAATAGGACTTTAGTTTACTTAAGGTGTGTATCTGAAATTCCGATCATAGTCTAGGGGGATATCTGTGCATTTTCACATATATTTAAGCAAAAGTTATTAAGTTTGATCGAATCTGTGCCTGGGCTTATACCAACATTTTTCACACCTACAATATGACAAGTAACAGTATAGTTTTATGATATGCAGAAATGTGTTACATAAATGAGATAAATGGTTCATCTAGGGACTATTGTGACATGACAAACTCAGAGTACCCCTGTGTTTCTGGCCAAAATTATTATGGTAGAGGACCAATACAACTATCATGGAACTTCAACTATGGTCCTGCTGGAAAAGACATCGGATTCGATGGGCTTAACGACCCCGATATTGTGTCTAGAGACAGTTTAATATCATTCAAAACTGCCCTGTGGTACTGGATGAACACTTGCCAACCTCTCTTAAGTTCTGGGCAAGGTTTCGGGGCAACGATTCGAGCTATTAATGGTCCTCTTGA</genome_strand>
        <mrna_strand>GTTGCAGTAGATGGGGTTATTGTGGCAGTGGAAAAGCTTATTGTGGACAAGGTTGTCAAGGAGGGCCTTGTTATAATTCTTCAACCAAAAATTACAATCATAATATTAATAACAATAATAATAATAATACCAATAGAGTTTCTGATATTGTTAGTGAATCATTTTTCAATGGAATTGCAAATCAAGCTGCTTCAAATTGTGAAGGCAAAGGATTTTACACGAGATCTGTATTTCTTGAAGCTTTAAAGTCTTATCCTGAATTCGCAACTATCGGTTTTTCTGATGATGATAATAAGCGCGAAATTGCTGCTTTCTTTGCTCATGTCACACATGAGACCGGAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATGTGTTACATAAATGAGATAAATGGTTCATCTAGGGACTATTGTGACATGACAAACTCAGAGTACCCCTGTGTTTCTGGCCAAAATTATTATGGTAGAGGACCAATACAACTATCATGGAACTTCAACTATGGTCCTGCTGGAAAAGACATCGGATTCGATGGGCTTAACGACCCCGATATTGTGTCTAGAGACAGTTTAATATCATTCAAAACTGCCCTGTGGTACTGGATGAACACTTGCCAACCTCTCTTAAGTTCTGGGCAAGGTTTCGGGGCAACGATTCGAGCTATTAATGGTCCTCTTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>75</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="-" PGL_start="10650" PGL_stop="8204"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="10650" e_stop="10423"/>
            <exon e_start="9586" e_stop="9517"/>
            <exon e_start="9358" e_stop="9261"/>
            <exon e_start="8536" e_stop="8461"/>
            <exon e_start="8283" e_stop="8204"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.984" acc_prob="0.958" e_score="0.961"/>
          <exon-intron don_prob="0.988" acc_prob="0.998" e_score="0.971"/>
          <exon-intron don_prob="0.928" acc_prob="0.959" e_score="0.990"/>
          <exon-intron don_prob="0.883" acc_prob="0.968" e_score="1.000"/>
          <exon-only e_score="0.950"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.961">
            <gDNA_exon_boundary e_start="10650" e_stop="10423" e_length="228"/>
          </exon>
          <intron i_serial="1" don_prob="0.984" acc_prob="0.958">
            <gDNA_intron_boundary i_start="10422" i_stop="9587" i_length="836"/>
          </intron>
          <exon e_serial="2" e_score="0.971">
            <gDNA_exon_boundary e_start="9586" e_stop="9517" e_length="70"/>
          </exon>
          <intron i_serial="2" don_prob="0.988" acc_prob="0.998">
            <gDNA_intron_boundary i_start="9516" i_stop="9359" i_length="158"/>
          </intron>
          <exon e_serial="3" e_score="0.990">
            <gDNA_exon_boundary e_start="9358" e_stop="9261" e_length="98"/>
          </exon>
          <intron i_serial="3" don_prob="0.928" acc_prob="0.959">
            <gDNA_intron_boundary i_start="9260" i_stop="8537" i_length="724"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="8536" e_stop="8461" e_length="76"/>
          </exon>
          <intron i_serial="4" don_prob="0.883" acc_prob="0.968">
            <gDNA_intron_boundary i_start="8460" i_stop="8284" i_length="177"/>
          </intron>
          <exon e_serial="5" e_score="0.950">
            <gDNA_exon_boundary e_start="8283" e_stop="8204" e_length="80"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="10650" stop="10423"/>
              <exon start="9586" stop="9517"/>
              <exon start="9358" stop="9261"/>
              <exon start="8536" stop="8461"/>
              <exon start="8283" stop="8204"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E464780" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTTCGGTGTAATCTGGAGGAATAGATGATAGTGGAGGCAGCGTTGGAGTTTTTCTTGCCGTCGTGGTGGGAGGTGCAAGTTGCCGTCGCCGCCGCGTCCTTCGTCATCCTCTCTTGCTGGTTCTTCAACCTCGGCGGAGGTGATATAGTTGATTATCGCCCTCGGGTTGACGGTTCTCCGACTGTCAGAAGTGAGAAAGTGGAGGATGATCCAGCATGTAGGGCTAGT : TTGTGCACTTATTTTGTAGATGAGCCAGTTAAAAGGAGATTCTCAAACTACTTCTGCCTATCTAATCAAG : GTTGAACTGTTAGCTGCTAAAAATCTTACTGCTGCTAATTTGAATGGGACTTCAGATCCATATGCAATCATCAGTTGTGGCTCACAAAAGAGATTTAG : TTCAATGGTTCCTGGTTCAAGAAATCCTATGTGGGGGGAGGAGTTCAACTTCTCTGTTGATGAGCTTCCAGTAGAG : ATTAACGTGACAATATATGACTGGGATATAATTTGGAAAAATGCTATTCTTGGTTCAGTAATGATACCTGTTGAAAATGA</gDNA_template>
            <first_frame> F  R  C  N  L  E  E  *  M  I  V  E  A  A  L  E  F  F  L  P  S  W  W  E  V  Q  V  A  V  A  A  A  S  F  V  I  L  S  C  W  F  F  N  L  G  G  G  D  I  V  D  Y  R  P  R  V  D  G  S  P  T  V  R  S  E  K  V  E  D  D  P  A  C  R  A  S  :  L  C  T  Y  F  V  D  E  P  V  K  R  R  F  S  N  Y  F  C  L  S  N  Q   : G  *  T  V  S  C  *  K  S  Y  C  C  *  F  E  W  D  F  R  S  I  C  N  H  Q  L  W  L  T  K  E  I  *  :  F  N  G  S  W  F  K  K  S  Y  V  G  G  G  V  Q  L  L  C  *  *  A  S  S  R   : D  *  R  D  N  I  *  L  G  Y  N  L  E  K  C  Y  S  W  F  S  N  D  T  C  *  K  * </first_frame>
            <second_frame>  F  G  V  I  W  R  N  R  *  *  W  R  Q  R  W  S  F  S  C  R  R  G  G  R  C  K  L  P  S  P  P  R  P  S  S  S  S  L  A  G  S  S  T  S  A  E  V  I  *  L  I  I  A  L  G  L  T  V  L  R  L  S  E  V  R  K  W  R  M  I  Q  H  V  G  L  V :   C  A  L  I  L  *  M  S  Q  L  K  G  D  S  Q  T  T  S  A  Y  L  I  K  :  V  E  L  L  A  A  K  N  L  T  A  A  N  L  N  G  T  S  D  P  Y  A  I  I  S  C  G  S  Q  K  R  F  S :   S  M  V  P  G  S  R  N  P  M  W  G  E  E  F  N  F  S  V  D  E  L  P  V  E  :  I  N  V  T  I  Y  D  W  D  I  I  W  K  N  A  I  L  G  S  V  M  I  P  V  E  N   </second_frame>
            <third_frame>   S  V  *  S  G  G  I  D  D  S  G  G  S  V  G  V  F  L  A  V  V  V  G  G  A  S  C  R  R  R  R  V  L  R  H  P  L  L  L  V  L  Q  P  R  R  R  *  Y  S  *  L  S  P  S  G  *  R  F  S  D  C  Q  K  *  E  S  G  G  *  S  S  M  *  G  *   : F  V  H  L  F  C  R  *  A  S  *  K  E  I  L  K  L  L  L  P  I  *  S  R :   L  N  C  *  L  L  K  I  L  L  L  L  I  *  M  G  L  Q  I  H  M  Q  S  S  V  V  A  H  K  R  D  L   : V  Q  W  F  L  V  Q  E  I  L  C  G  G  R  S  S  T  S  L  L  M  S  F  Q  *  R :   L  T  *  Q  Y  M  T  G  I  *  F  G  K  M  L  F  L  V  Q  *  *  Y  L  L  K  M  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0167M06.1" strand="-"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="9567" stop="9517"/>
                    <exon start="9358" stop="9261"/>
                    <exon start="8536" stop="8461"/>
                    <exon start="8283" stop="8206"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>303</number_coding_nucleotides>
                  <number_encoded_amino_acids>101</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>MSQLKGDSQTTSAYLIKVELLAAKNLTAANLNGTSDPYAIISCGSQKRFSSMVPGSRNPMWGEEFNFSVDELPVEINVTIYDWDIIWKNAILGSVMIPVEN</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0167M06.1" strand="-"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="10626" stop="10423"/>
                    <exon start="9586" stop="9517"/>
                    <exon start="9358" stop="9354"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>276</number_coding_nucleotides>
                  <number_encoded_amino_acids>92</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>MIVEAALEFFLPSWWEVQVAVAAASFVILSCWFFNLGGGDIVDYRPRVDGSPTVRSEKVEDDPACRASLCTYFVDEPVKRRFSNYFCLSNQG*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="-" PGL_start="34828" PGL_stop="24923"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="34828" e_stop="34089"/>
            <exon e_start="33111" e_stop="32898"/>
            <exon e_start="32816" e_stop="32736"/>
            <exon e_start="32230" e_stop="32138"/>
            <exon e_start="32052" e_stop="31966"/>
            <exon e_start="29181" e_stop="29081"/>
            <exon e_start="28615" e_stop="28582"/>
            <exon e_start="28504" e_stop="28430"/>
            <exon e_start="27685" e_stop="27602"/>
            <exon e_start="27503" e_stop="27369"/>
            <exon e_start="26066" e_stop="25921"/>
            <exon e_start="25338" e_stop="24923"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.989" acc_prob="0.997" e_score="0.991"/>
          <exon-intron don_prob="0.928" acc_prob="0.996" e_score="0.986"/>
          <exon-intron don_prob="0.903" acc_prob="0.768" e_score="1.000"/>
          <exon-intron don_prob="0.851" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.988" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.984" e_score="1.000"/>
          <exon-intron don_prob="0.989" acc_prob="0.668" e_score="1.000"/>
          <exon-intron don_prob="0.985" acc_prob="0.924" e_score="1.000"/>
          <exon-intron don_prob="0.957" acc_prob="0.667" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.979" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.991">
            <gDNA_exon_boundary e_start="34828" e_stop="34089" e_length="740"/>
          </exon>
          <intron i_serial="1" don_prob="0.989" acc_prob="0.997">
            <gDNA_intron_boundary i_start="34088" i_stop="33112" i_length="977"/>
          </intron>
          <exon e_serial="2" e_score="0.986">
            <gDNA_exon_boundary e_start="33111" e_stop="32898" e_length="214"/>
          </exon>
          <intron i_serial="2" don_prob="0.928" acc_prob="0.996">
            <gDNA_intron_boundary i_start="32897" i_stop="32817" i_length="81"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="32816" e_stop="32736" e_length="81"/>
          </exon>
          <intron i_serial="3" don_prob="0.903" acc_prob="0.768">
            <gDNA_intron_boundary i_start="32735" i_stop="32231" i_length="505"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="32230" e_stop="32138" e_length="93"/>
          </exon>
          <intron i_serial="4" don_prob="0.851" acc_prob="0.999">
            <gDNA_intron_boundary i_start="32137" i_stop="32053" i_length="85"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="32052" e_stop="31966" e_length="87"/>
          </exon>
          <intron i_serial="5" don_prob="0.999" acc_prob="0.988">
            <gDNA_intron_boundary i_start="31965" i_stop="29182" i_length="2784"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="29181" e_stop="29081" e_length="101"/>
          </exon>
          <intron i_serial="6" don_prob="0.999" acc_prob="0.984">
            <gDNA_intron_boundary i_start="29080" i_stop="28616" i_length="465"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="28615" e_stop="28582" e_length="34"/>
          </exon>
          <intron i_serial="7" don_prob="0.989" acc_prob="0.668">
            <gDNA_intron_boundary i_start="28581" i_stop="28505" i_length="77"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="28504" e_stop="28430" e_length="75"/>
          </exon>
          <intron i_serial="8" don_prob="0.985" acc_prob="0.924">
            <gDNA_intron_boundary i_start="28429" i_stop="27686" i_length="744"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="27685" e_stop="27602" e_length="84"/>
          </exon>
          <intron i_serial="9" don_prob="0.957" acc_prob="0.667">
            <gDNA_intron_boundary i_start="27601" i_stop="27504" i_length="98"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="27503" e_stop="27369" e_length="135"/>
          </exon>
          <intron i_serial="10" don_prob="0.998" acc_prob="0.999">
            <gDNA_intron_boundary i_start="27368" i_stop="26067" i_length="1302"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="26066" e_stop="25921" e_length="146"/>
          </exon>
          <intron i_serial="11" don_prob="0.994" acc_prob="0.979">
            <gDNA_intron_boundary i_start="25920" i_stop="25339" i_length="582"/>
          </intron>
          <exon e_serial="12" e_score="1.000">
            <gDNA_exon_boundary e_start="25338" e_stop="24923" e_length="416"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34828" stop="34089"/>
              <exon start="33111" stop="32898"/>
              <exon start="32816" stop="32736"/>
              <exon start="32230" stop="32138"/>
              <exon start="32052" stop="31966"/>
              <exon start="29181" stop="29081"/>
              <exon start="28615" stop="28582"/>
              <exon start="28504" stop="28430"/>
              <exon start="27685" stop="27602"/>
              <exon start="27503" stop="27369"/>
              <exon start="26066" stop="25921"/>
              <exon start="25338" stop="24964"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E741064" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34792" stop="34168"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E314837" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34789" stop="34136"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E317994" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34787" stop="34168"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E487994" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34778" stop="34254"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E210230" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34733" stop="34089"/>
              <exon start="33111" stop="33046"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E407124" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33069" stop="32898"/>
              <exon start="32816" stop="32736"/>
              <exon start="32230" stop="32138"/>
              <exon start="32052" stop="31966"/>
              <exon start="29181" stop="29081"/>
              <exon start="28615" stop="28582"/>
              <exon start="28504" stop="28458"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E474529" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33069" stop="32898"/>
              <exon start="32816" stop="32736"/>
              <exon start="32230" stop="32195"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E474314" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32921" stop="32898"/>
              <exon start="32816" stop="32736"/>
              <exon start="32230" stop="32138"/>
              <exon start="32052" stop="31966"/>
              <exon start="29181" stop="29081"/>
              <exon start="28615" stop="28582"/>
              <exon start="28504" stop="28430"/>
              <exon start="27685" stop="27608"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E417668" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32921" stop="32898"/>
              <exon start="32816" stop="32736"/>
              <exon start="32230" stop="32138"/>
              <exon start="32052" stop="31966"/>
              <exon start="29181" stop="29081"/>
              <exon start="28615" stop="28582"/>
              <exon start="28504" stop="28468"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E417632" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32792" stop="32736"/>
              <exon start="32230" stop="32138"/>
              <exon start="32052" stop="31966"/>
              <exon start="29181" stop="29081"/>
              <exon start="28615" stop="28582"/>
              <exon start="28504" stop="28430"/>
              <exon start="27685" stop="27602"/>
              <exon start="27503" stop="27369"/>
              <exon start="26066" stop="26029"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E408116" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32776" stop="32736"/>
              <exon start="32230" stop="32138"/>
              <exon start="32052" stop="31966"/>
              <exon start="29181" stop="29081"/>
              <exon start="28615" stop="28582"/>
              <exon start="28504" stop="28430"/>
              <exon start="27685" stop="27602"/>
              <exon start="27503" stop="27369"/>
              <exon start="26066" stop="25931"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E689371" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32775" stop="32736"/>
              <exon start="32230" stop="32138"/>
              <exon start="32052" stop="31966"/>
              <exon start="29181" stop="29081"/>
              <exon start="28615" stop="28582"/>
              <exon start="28504" stop="28430"/>
              <exon start="27685" stop="27602"/>
              <exon start="27503" stop="27396"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E332971" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28609" stop="28582"/>
              <exon start="28504" stop="28430"/>
              <exon start="27685" stop="27602"/>
              <exon start="27503" stop="27369"/>
              <exon start="26066" stop="25921"/>
              <exon start="25338" stop="25010"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E435552" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28497" stop="28430"/>
              <exon start="27685" stop="27602"/>
              <exon start="27503" stop="27369"/>
              <exon start="26066" stop="25921"/>
              <exon start="25338" stop="24964"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E732107" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="27677" stop="27602"/>
              <exon start="27503" stop="27369"/>
              <exon start="26066" stop="25921"/>
              <exon start="25338" stop="25010"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E616271" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25992" stop="25921"/>
              <exon start="25338" stop="25010"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E407545" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25338" stop="24998"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E404982" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25304" stop="24929"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E224934" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25302" stop="24923"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E229911" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TCTCTTACTTGAATTTTCAGTCTCTTCTCCCAGCCGCCATTAAAACCAGCACTCGCAAACTCCAATTTCTCTTCTCCGGCAATGGCGTCTATCACCGCAAATCATCCAATCTCCGGTAAACCATTAATCTCATTCCGTCCCAAAAACCCTTTACTTCAAACCCAAACTCTCTTCAATTTCAAACCATCAATCTCCAAGCACTCCAATTCTTCATTTTCCATTCCCGTTGTCCGCTGCTCAATCCGCCGTAGACCGGAATATACTCCGAGTCACATTCCCGATCCAAACTATGTCCGGATATTCGACACCACTCTCCGTGATGGCGAACAATCACCAGGGGCTACAATGACTACAAAGGAGAAACTGGATGTTGCACGTCAGTTAGCTAAGCTTGGTGTTGATATAATTGAGGCTGGTTTTCCTGCTTCTTCTGAAGCTGATCTTGAAGCTGTGAAATTGATAGCTAAGGAAGTTGGGAATGGTGTTTATGAAGAGGGATATGTTCCGGTTATTTGTGGATTGGCGAGGTGTAATAAGAAGGATATTGATAAGGCGTGGGAGGCTGTGAAGTATGCTAAGAAACCGAGGATTCATACGTTTATTGCTACAAGTGAGATACATATGAATTATAAGCTGAAAATGAGTAGAGATCAAGTTGTTGAGAAAGCTAGGAGTATGGTGGCTTATGCAAGGAGTATTGGGTGTGAGGATGTTGAATTTAGCCCTGAAGATGCTGGAAG : ATCTGATCCAGAGTTTCTTTATCATATCCTTGGAGAGGTTATCAAAGCTGGGGCAACAACCCTTAACATCCCTGATACTGTTGGATACACTGTACCCGAAGAATTTGGACAATTGATTGCTAAAATAAAAGCGAATACCCCAGGAGTTGAAGATGTGATCATTTCAACACACTGCCAGAACGATCTTGGGCTTTCTACTGCCAACACCTTAGCT : GGAGCATGTGCAGGTGCAAGACAATTGGAAGTGACCATCAATGGAATTGGTGAAAGAGCTGGAAATGCTTCTTTAGAGGAG : GTTGTAATGGCCTTAAAGTGTCGTGGAGAGCAAGTACTAGGTGGCCTATATACAGGGATTAATACACAACATATACTCATGTCAAGCAAGATG : GTAGAGGAGTATTCCGGACTTCATGTGCAGCCACACAAAGCCATTGTTGGAGCTAATGCCTTTGCTCATGAAAGTGGCATCCATCAG : GATGGAATGTTAAAACACAAAGATACATATGAGATTATATCTCCTGAAGATATTGGGCTTAATCGTGCTAATGAATCTGGTATTGTCCTTGGGAAACTCAG : TGGGCGTCATGCTTTGCAAGCCAAAATGCTTGAG : CTTGGATACGAGATTGAGGGCAAAGAACTTGATGACCTGTTCTGGCGATTCAAATCTGTGGCTGAGAAGAAAAAG : AAAATTACAGATGATGACCTGGTAGCACTGATGTCAGATGAGGTTTTCCAGCCTCAATTTGTGTGGCAACTTCAAAATGTACAG : GTTACTTCTGGAAGTCTTGGCCTTTCTACAGCAACTGTTAAGCTCATTGATGCTGATGGTCGAGAGCATATTTCTTGTTCTGTTGGAACGGGGCCAGTTGACGCGGCTTATAAGGCAGTTGATCTCATTGTTAAG : GTACCTGTAACACTCCTTGAGTATTCCATGAATGCAGTCACACAAGGTATAGATGCTATAGCTTCAACCAGAGTCTTAATTCGTGGAGAAAATGGCCATACATCAACCCATGCCGTAACTGGAGAGACTATTCACCGTACATTTAG : TGGAACCGGAGCAGATATGGATATTGTCATCTCCAGTGTCCGAGCCTATGTTGGTGCATTGAATAAGATGATGAGTTTCAGAAAACTAATGGCGAAAAATAACAAACCCGAAAGCAGTGCAGTCGTATAGGTACTTCTGTGCAAATCAAGGTTATGGAACTTTTGCAACTGCACTGGAGCTTTATCATTTGTACAAAATGTAGGAGTCTGTTCAAAGAATTTGAGCCTGTAGTTTTCAAGAAAACAAAGCTTAATATGTCTGGTAGTGCTTGAAAATCATCTAAGTTTATGGTGTATCAGTTGGAACATTAGACACATTGTCCATATAACTTTGTTCATGCTCCCGTTTAACTAATTTATGAATCTACATACCACGCAAGATTTTCGAAATGATTTCAGAAATTATGAAAATCTCT</gDNA_template>
            <first_frame> S  L  T  *  I  F  S  L  F  S  Q  P  P  L  K  P  A  L  A  N  S  N  F  S  S  P  A  M  A  S  I  T  A  N  H  P  I  S  G  K  P  L  I  S  F  R  P  K  N  P  L  L  Q  T  Q  T  L  F  N  F  K  P  S  I  S  K  H  S  N  S  S  F  S  I  P  V  V  R  C  S  I  R  R  R  P  E  Y  T  P  S  H  I  P  D  P  N  Y  V  R  I  F  D  T  T  L  R  D  G  E  Q  S  P  G  A  T  M  T  T  K  E  K  L  D  V  A  R  Q  L  A  K  L  G  V  D  I  I  E  A  G  F  P  A  S  S  E  A  D  L  E  A  V  K  L  I  A  K  E  V  G  N  G  V  Y  E  E  G  Y  V  P  V  I  C  G  L  A  R  C  N  K  K  D  I  D  K  A  W  E  A  V  K  Y  A  K  K  P  R  I  H  T  F  I  A  T  S  E  I  H  M  N  Y  K  L  K  M  S  R  D  Q  V  V  E  K  A  R  S  M  V  A  Y  A  R  S  I  G  C  E  D  V  E  F  S  P  E  D  A  G  R :   S  D  P  E  F  L  Y  H  I  L  G  E  V  I  K  A  G  A  T  T  L  N  I  P  D  T  V  G  Y  T  V  P  E  E  F  G  Q  L  I  A  K  I  K  A  N  T  P  G  V  E  D  V  I  I  S  T  H  C  Q  N  D  L  G  L  S  T  A  N  T  L  A  :  G  A  C  A  G  A  R  Q  L  E  V  T  I  N  G  I  G  E  R  A  G  N  A  S  L  E  E  :  V  V  M  A  L  K  C  R  G  E  Q  V  L  G  G  L  Y  T  G  I  N  T  Q  H  I  L  M  S  S  K  M  :  V  E  E  Y  S  G  L  H  V  Q  P  H  K  A  I  V  G  A  N  A  F  A  H  E  S  G  I  H  Q  :  D  G  M  L  K  H  K  D  T  Y  E  I  I  S  P  E  D  I  G  L  N  R  A  N  E  S  G  I  V  L  G  K  L  S :   G  R  H  A  L  Q  A  K  M  L  E  :  L  G  Y  E  I  E  G  K  E  L  D  D  L  F  W  R  F  K  S  V  A  E  K  K  K  :  K  I  T  D  D  D  L  V  A  L  M  S  D  E  V  F  Q  P  Q  F  V  W  Q  L  Q  N  V  Q  :  V  T  S  G  S  L  G  L  S  T  A  T  V  K  L  I  D  A  D  G  R  E  H  I  S  C  S  V  G  T  G  P  V  D  A  A  Y  K  A  V  D  L  I  V  K  :  V  P  V  T  L  L  E  Y  S  M  N  A  V  T  Q  G  I  D  A  I  A  S  T  R  V  L  I  R  G  E  N  G  H  T  S  T  H  A  V  T  G  E  T  I  H  R  T  F  S :   G  T  G  A  D  M  D  I  V  I  S  S  V  R  A  Y  V  G  A  L  N  K  M  M  S  F  R  K  L  M  A  K  N  N  K  P  E  S  S  A  V  V  *  V  L  L  C  K  S  R  L  W  N  F  C  N  C  T  G  A  L  S  F  V  Q  N  V  G  V  C  S  K  N  L  S  L  *  F  S  R  K  Q  S  L  I  C  L  V  V  L  E  N  H  L  S  L  W  C  I  S  W  N  I  R  H  I  V  H  I  T  L  F  M  L  P  F  N  *  F  M  N  L  H  T  T  Q  D  F  R  N  D  F  R  N  Y  E  N  L  </first_frame>
            <second_frame>  L  L  L  E  F  S  V  S  S  P  S  R  H  *  N  Q  H  S  Q  T  P  I  S  L  L  R  Q  W  R  L  S  P  Q  I  I  Q  S  P  V  N  H  *  S  H  S  V  P  K  T  L  Y  F  K  P  K  L  S  S  I  S  N  H  Q  S  P  S  T  P  I  L  H  F  P  F  P  L  S  A  A  Q  S  A  V  D  R  N  I  L  R  V  T  F  P  I  Q  T  M  S  G  Y  S  T  P  L  S  V  M  A  N  N  H  Q  G  L  Q  *  L  Q  R  R  N  W  M  L  H  V  S  *  L  S  L  V  L  I  *  L  R  L  V  F  L  L  L  L  K  L  I  L  K  L  *  N  *  *  L  R  K  L  G  M  V  F  M  K  R  D  M  F  R  L  F  V  D  W  R  G  V  I  R  R  I  L  I  R  R  G  R  L  *  S  M  L  R  N  R  G  F  I  R  L  L  L  Q  V  R  Y  I  *  I  I  S  *  K  *  V  E  I  K  L  L  R  K  L  G  V  W  W  L  M  Q  G  V  L  G  V  R  M  L  N  L  A  L  K  M  L  E   : D  L  I  Q  S  F  F  I  I  S  L  E  R  L  S  K  L  G  Q  Q  P  L  T  S  L  I  L  L  D  T  L  Y  P  K  N  L  D  N  *  L  L  K  *  K  R  I  P  Q  E  L  K  M  *  S  F  Q  H  T  A  R  T  I  L  G  F  L  L  P  T  P  *  L :   E  H  V  Q  V  Q  D  N  W  K  *  P  S  M  E  L  V  K  E  L  E  M  L  L  *  R  R :   L  *  W  P  *  S  V  V  E  S  K  Y  *  V  A  Y  I  Q  G  L  I  H  N  I  Y  S  C  Q  A  R  W :   *  R  S  I  P  D  F  M  C  S  H  T  K  P  L  L  E  L  M  P  L  L  M  K  V  A  S  I  R :   M  E  C  *  N  T  K  I  H  M  R  L  Y  L  L  K  I  L  G  L  I  V  L  M  N  L  V  L  S  L  G  N  S   : V  G  V  M  L  C  K  P  K  C  L  S :   L  D  T  R  L  R  A  K  N  L  M  T  C  S  G  D  S  N  L  W  L  R  R  K  R :   K  L  Q  M  M  T  W  *  H  *  C  Q  M  R  F  S  S  L  N  L  C  G  N  F  K  M  Y  R :   L  L  L  E  V  L  A  F  L  Q  Q  L  L  S  S  L  M  L  M  V  E  S  I  F  L  V  L  L  E  R  G  Q  L  T  R  L  I  R  Q  L  I  S  L  L  R :   Y  L  *  H  S  L  S  I  P  *  M  Q  S  H  K  V  *  M  L  *  L  Q  P  E  S  *  F  V  E  K  M  A  I  H  Q  P  M  P  *  L  E  R  L  F  T  V  H  L   : V  E  P  E  Q  I  W  I  L  S  S  P  V  S  E  P  M  L  V  H  *  I  R  *  *  V  S  E  N  *  W  R  K  I  T  N  P  K  A  V  Q  S  Y  R  Y  F  C  A  N  Q  G  Y  G  T  F  A  T  A  L  E  L  Y  H  L  Y  K  M  *  E  S  V  Q  R  I  *  A  C  S  F  Q  E  N  K  A  *  Y  V  W  *  C  L  K  I  I  *  V  Y  G  V  S  V  G  T  L  D  T  L  S  I  *  L  C  S  C  S  R  L  T  N  L  *  I  Y  I  P  R  K  I  F  E  M  I  S  E  I  M  K  I  S </second_frame>
            <third_frame>   S  Y  L  N  F  Q  S  L  L  P  A  A  I  K  T  S  T  R  K  L  Q  F  L  F  S  G  N  G  V  Y  H  R  K  S  S  N  L  R  *  T  I  N  L  I  P  S  Q  K  P  F  T  S  N  P  N  S  L  Q  F  Q  T  I  N  L  Q  A  L  Q  F  F  I  F  H  S  R  C  P  L  L  N  P  P  *  T  G  I  Y  S  E  S  H  S  R  S  K  L  C  P  D  I  R  H  H  S  P  *  W  R  T  I  T  R  G  Y  N  D  Y  K  G  E  T  G  C  C  T  S  V  S  *  A  W  C  *  Y  N  *  G  W  F  S  C  F  F  *  S  *  S  *  S  C  E  I  D  S  *  G  S  W  E  W  C  L  *  R  G  I  C  S  G  Y  L  W  I  G  E  V  *  *  E  G  Y  *  *  G  V  G  G  C  E  V  C  *  E  T  E  D  S  Y  V  Y  C  Y  K  *  D  T  Y  E  L  *  A  E  N  E  *  R  S  S  C  *  E  S  *  E  Y  G  G  L  C  K  E  Y  W  V  *  G  C  *  I  *  P  *  R  C  W  K  :  I  *  S  R  V  S  L  S  Y  P  W  R  G  Y  Q  S  W  G  N  N  P  *  H  P  *  Y  C  W  I  H  C  T  R  R  I  W  T  I  D  C  *  N  K  S  E  Y  P  R  S  *  R  C  D  H  F  N  T  L  P  E  R  S  W  A  F  Y  C  Q  H  L  S   : W  S  M  C  R  C  K  T  I  G  S  D  H  Q  W  N  W  *  K  S  W  K  C  F  F  R  G   : G  C  N  G  L  K  V  S  W  R  A  S  T  R  W  P  I  Y  R  D  *  Y  T  T  Y  T  H  V  K  Q  D   : G  R  G  V  F  R  T  S  C  A  A  T  Q  S  H  C  W  S  *  C  L  C  S  *  K  W  H  P  S   : G  W  N  V  K  T  Q  R  Y  I  *  D  Y  I  S  *  R  Y  W  A  *  S  C  *  *  I  W  Y  C  P  W  E  T  Q  :  W  A  S  C  F  A  S  Q  N  A  *   : A  W  I  R  D  *  G  Q  R  T  *  *  P  V  L  A  I  Q  I  C  G  *  E  E  K   : E  N  Y  R  *  *  P  G  S  T  D  V  R  *  G  F  P  A  S  I  C  V  A  T  S  K  C  T   : G  Y  F  W  K  S  W  P  F  Y  S  N  C  *  A  H  *  C  *  W  S  R  A  Y  F  L  F  C  W  N  G  A  S  *  R  G  L  *  G  S  *  S  H  C  *   : G  T  C  N  T  P  *  V  F  H  E  C  S  H  T  R  Y  R  C  Y  S  F  N  Q  S  L  N  S  W  R  K  W  P  Y  I  N  P  C  R  N  W  R  D  Y  S  P  Y  I  *  :  W  N  R  S  R  Y  G  Y  C  H  L  Q  C  P  S  L  C  W  C  I  E  *  D  D  E  F  Q  K  T  N  G  E  K  *  Q  T  R  K  Q  C  S  R  I  G  T  S  V  Q  I  K  V  M  E  L  L  Q  L  H  W  S  F  I  I  C  T  K  C  R  S  L  F  K  E  F  E  P  V  V  F  K  K  T  K  L  N  M  S  G  S  A  *  K  S  S  K  F  M  V  Y  Q  L  E  H  *  T  H  C  P  Y  N  F  V  H  A  P  V  *  L  I  Y  E  S  T  Y  H  A  R  F  S  K  *  F  Q  K  L  *  K  S   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0167M06.1" strand="-"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="34816" stop="34089"/>
                    <exon start="33111" stop="32898"/>
                    <exon start="32816" stop="32736"/>
                    <exon start="32230" stop="32138"/>
                    <exon start="32052" stop="31966"/>
                    <exon start="29181" stop="29081"/>
                    <exon start="28615" stop="28582"/>
                    <exon start="28504" stop="28430"/>
                    <exon start="27685" stop="27602"/>
                    <exon start="27503" stop="27369"/>
                    <exon start="26066" stop="25921"/>
                    <exon start="25338" stop="25209"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1905</number_coding_nucleotides>
                  <number_encoded_amino_acids>635</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IFSLFSQPPLKPALANSNFSSPAMASITANHPISGKPLISFRPKNPLLQTQTLFNFKPSISKHSNSSFSIPVVRCSIRRRPEYTPSHIPDPNYVRIFDTTLRDGEQSPGATMTTKEKLDVARQLAKLGVDIIEAGFPASSEADLEAVKLIAKEVGNGVYEEGYVPVICGLARCNKKDIDKAWEAVKYAKKPRIHTFIATSEIHMNYKLKMSRDQVVEKARSMVAYARSIGCEDVEFSPEDAGRSDPEFLYHILGEVIKAGATTLNIPDTVGYTVPEEFGQLIAKIKANTPGVEDVIISTHCQNDLGLSTANTLAGACAGARQLEVTINGIGERAGNASLEEVVMALKCRGEQVLGGLYTGINTQHILMSSKMVEEYSGLHVQPHKAIVGANAFAHESGIHQDGMLKHKDTYEIISPEDIGLNRANESGIVLGKLSGRHALQAKMLELGYEIEGKELDDLFWRFKSVAEKKKKITDDDLVALMSDEVFQPQFVWQLQNVQVTSGSLGLSTATVKLIDADGREHISCSVGTGPVDAAYKAVDLIVKVPVTLLEYSMNAVTQGIDAIASTRVLIRGENGHTSTHAVTGETIHRTFSGTGADMDIVISSVRAYVGALNKMMSFRKLMAKNNKPESSAVV*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="28749" e_stop="28729"/>
            <exon e_start="28615" e_stop="28582"/>
            <exon e_start="28504" e_stop="28430"/>
            <exon e_start="27685" e_stop="27602"/>
            <exon e_start="27503" e_stop="27369"/>
            <exon e_start="26066" e_stop="25921"/>
            <exon e_start="25338" e_stop="24923"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.859" acc_prob="0.984" e_score="0.571"/>
          <exon-intron don_prob="0.989" acc_prob="0.668" e_score="0.971"/>
          <exon-intron don_prob="0.985" acc_prob="0.924" e_score="0.985"/>
          <exon-intron don_prob="0.957" acc_prob="0.667" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.979" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.571">
            <gDNA_exon_boundary e_start="28749" e_stop="28729" e_length="21"/>
          </exon>
          <intron i_serial="1" don_prob="0.859" acc_prob="0.984">
            <gDNA_intron_boundary i_start="28728" i_stop="28616" i_length="113"/>
          </intron>
          <exon e_serial="2" e_score="0.971">
            <gDNA_exon_boundary e_start="28615" e_stop="28582" e_length="34"/>
          </exon>
          <intron i_serial="2" don_prob="0.989" acc_prob="0.668">
            <gDNA_intron_boundary i_start="28581" i_stop="28505" i_length="77"/>
          </intron>
          <exon e_serial="3" e_score="0.985">
            <gDNA_exon_boundary e_start="28504" e_stop="28430" e_length="75"/>
          </exon>
          <intron i_serial="3" don_prob="0.985" acc_prob="0.924">
            <gDNA_intron_boundary i_start="28429" i_stop="27686" i_length="744"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="27685" e_stop="27602" e_length="84"/>
          </exon>
          <intron i_serial="4" don_prob="0.957" acc_prob="0.667">
            <gDNA_intron_boundary i_start="27601" i_stop="27504" i_length="98"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="27503" e_stop="27369" e_length="135"/>
          </exon>
          <intron i_serial="5" don_prob="0.998" acc_prob="0.999">
            <gDNA_intron_boundary i_start="27368" i_stop="26067" i_length="1302"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="26066" e_stop="25921" e_length="146"/>
          </exon>
          <intron i_serial="6" don_prob="0.994" acc_prob="0.979">
            <gDNA_intron_boundary i_start="25920" i_stop="25339" i_length="582"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="25338" e_stop="24923" e_length="416"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28749" stop="28729"/>
              <exon start="28615" stop="28582"/>
              <exon start="28504" stop="28430"/>
              <exon start="27685" stop="27602"/>
              <exon start="27503" stop="27369"/>
              <exon start="26066" stop="25921"/>
              <exon start="25338" stop="25229"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E405874" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28609" stop="28582"/>
              <exon start="28504" stop="28430"/>
              <exon start="27685" stop="27602"/>
              <exon start="27503" stop="27369"/>
              <exon start="26066" stop="25921"/>
              <exon start="25338" stop="25010"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E435552" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28497" stop="28430"/>
              <exon start="27685" stop="27602"/>
              <exon start="27503" stop="27369"/>
              <exon start="26066" stop="25921"/>
              <exon start="25338" stop="24964"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E732107" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="27677" stop="27602"/>
              <exon start="27503" stop="27369"/>
              <exon start="26066" stop="25921"/>
              <exon start="25338" stop="25010"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E616271" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25992" stop="25921"/>
              <exon start="25338" stop="25010"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E407545" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25338" stop="24998"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E404982" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25304" stop="24929"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E224934" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25302" stop="24923"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E229911" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CATGAAATAATTATCATCACA : TGGGCGTCATGCTTTGCAAGCCAAAATGCTTGAG : CTTGGATACGAGATTGAGGGCAAAGAACTTGATGACCTGTTCTGGCGATTCAAATCTGTGGCTGAGAAGAAAAAG : AAAATTACAGATGATGACCTGGTAGCACTGATGTCAGATGAGGTTTTCCAGCCTCAATTTGTGTGGCAACTTCAAAATGTACAG : GTTACTTCTGGAAGTCTTGGCCTTTCTACAGCAACTGTTAAGCTCATTGATGCTGATGGTCGAGAGCATATTTCTTGTTCTGTTGGAACGGGGCCAGTTGACGCGGCTTATAAGGCAGTTGATCTCATTGTTAAG : GTACCTGTAACACTCCTTGAGTATTCCATGAATGCAGTCACACAAGGTATAGATGCTATAGCTTCAACCAGAGTCTTAATTCGTGGAGAAAATGGCCATACATCAACCCATGCCGTAACTGGAGAGACTATTCACCGTACATTTAG : TGGAACCGGAGCAGATATGGATATTGTCATCTCCAGTGTCCGAGCCTATGTTGGTGCATTGAATAAGATGATGAGTTTCAGAAAACTAATGGCGAAAAATAACAAACCCGAAAGCAGTGCAGTCGTATAGGTACTTCTGTGCAAATCAAGGTTATGGAACTTTTGCAACTGCACTGGAGCTTTATCATTTGTACAAAATGTAGGAGTCTGTTCAAAGAATTTGAGCCTGTAGTTTTCAAGAAAACAAAGCTTAATATGTCTGGTAGTGCTTGAAAATCATCTAAGTTTATGGTGTATCAGTTGGAACATTAGACACATTGTCCATATAACTTTGTTCATGCTCCCGTTTAACTAATTTATGAATCTACATACCACGCAAGATTTTCGAAATGATTTCAGAAATTATGAAAATCTCT</gDNA_template>
            <first_frame> H  E  I  I  I  I  T  :  W  A  S  C  F  A  S  Q  N  A  *   : A  W  I  R  D  *  G  Q  R  T  *  *  P  V  L  A  I  Q  I  C  G  *  E  E  K   : E  N  Y  R  *  *  P  G  S  T  D  V  R  *  G  F  P  A  S  I  C  V  A  T  S  K  C  T   : G  Y  F  W  K  S  W  P  F  Y  S  N  C  *  A  H  *  C  *  W  S  R  A  Y  F  L  F  C  W  N  G  A  S  *  R  G  L  *  G  S  *  S  H  C  *   : G  T  C  N  T  P  *  V  F  H  E  C  S  H  T  R  Y  R  C  Y  S  F  N  Q  S  L  N  S  W  R  K  W  P  Y  I  N  P  C  R  N  W  R  D  Y  S  P  Y  I  *  :  W  N  R  S  R  Y  G  Y  C  H  L  Q  C  P  S  L  C  W  C  I  E  *  D  D  E  F  Q  K  T  N  G  E  K  *  Q  T  R  K  Q  C  S  R  I  G  T  S  V  Q  I  K  V  M  E  L  L  Q  L  H  W  S  F  I  I  C  T  K  C  R  S  L  F  K  E  F  E  P  V  V  F  K  K  T  K  L  N  M  S  G  S  A  *  K  S  S  K  F  M  V  Y  Q  L  E  H  *  T  H  C  P  Y  N  F  V  H  A  P  V  *  L  I  Y  E  S  T  Y  H  A  R  F  S  K  *  F  Q  K  L  *  K  S   </first_frame>
            <second_frame>  M  K  *  L  S  S  H :   G  R  H  A  L  Q  A  K  M  L  E  :  L  G  Y  E  I  E  G  K  E  L  D  D  L  F  W  R  F  K  S  V  A  E  K  K  K  :  K  I  T  D  D  D  L  V  A  L  M  S  D  E  V  F  Q  P  Q  F  V  W  Q  L  Q  N  V  Q  :  V  T  S  G  S  L  G  L  S  T  A  T  V  K  L  I  D  A  D  G  R  E  H  I  S  C  S  V  G  T  G  P  V  D  A  A  Y  K  A  V  D  L  I  V  K  :  V  P  V  T  L  L  E  Y  S  M  N  A  V  T  Q  G  I  D  A  I  A  S  T  R  V  L  I  R  G  E  N  G  H  T  S  T  H  A  V  T  G  E  T  I  H  R  T  F  S :   G  T  G  A  D  M  D  I  V  I  S  S  V  R  A  Y  V  G  A  L  N  K  M  M  S  F  R  K  L  M  A  K  N  N  K  P  E  S  S  A  V  V  *  V  L  L  C  K  S  R  L  W  N  F  C  N  C  T  G  A  L  S  F  V  Q  N  V  G  V  C  S  K  N  L  S  L  *  F  S  R  K  Q  S  L  I  C  L  V  V  L  E  N  H  L  S  L  W  C  I  S  W  N  I  R  H  I  V  H  I  T  L  F  M  L  P  F  N  *  F  M  N  L  H  T  T  Q  D  F  R  N  D  F  R  N  Y  E  N  L  </second_frame>
            <third_frame>   *  N  N  Y  H  H   : M  G  V  M  L  C  K  P  K  C  L  S :   L  D  T  R  L  R  A  K  N  L  M  T  C  S  G  D  S  N  L  W  L  R  R  K  R :   K  L  Q  M  M  T  W  *  H  *  C  Q  M  R  F  S  S  L  N  L  C  G  N  F  K  M  Y  R :   L  L  L  E  V  L  A  F  L  Q  Q  L  L  S  S  L  M  L  M  V  E  S  I  F  L  V  L  L  E  R  G  Q  L  T  R  L  I  R  Q  L  I  S  L  L  R :   Y  L  *  H  S  L  S  I  P  *  M  Q  S  H  K  V  *  M  L  *  L  Q  P  E  S  *  F  V  E  K  M  A  I  H  Q  P  M  P  *  L  E  R  L  F  T  V  H  L   : V  E  P  E  Q  I  W  I  L  S  S  P  V  S  E  P  M  L  V  H  *  I  R  *  *  V  S  E  N  *  W  R  K  I  T  N  P  K  A  V  Q  S  Y  R  Y  F  C  A  N  Q  G  Y  G  T  F  A  T  A  L  E  L  Y  H  L  Y  K  M  *  E  S  V  Q  R  I  *  A  C  S  F  Q  E  N  K  A  *  Y  V  W  *  C  L  K  I  I  *  V  Y  G  V  S  V  G  T  L  D  T  L  S  I  *  L  C  S  C  S  R  L  T  N  L  *  I  Y  I  P  R  K  I  F  E  M  I  S  E  I  M  K  I  S </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0167M06.1" strand="-"/>
                <serials PGL_serial="2" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="28739" stop="28729"/>
                    <exon start="28615" stop="28582"/>
                    <exon start="28504" stop="28430"/>
                    <exon start="27685" stop="27602"/>
                    <exon start="27503" stop="27369"/>
                    <exon start="26066" stop="25921"/>
                    <exon start="25338" stop="25209"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>612</number_coding_nucleotides>
                  <number_encoded_amino_acids>204</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LSSHGRHALQAKMLELGYEIEGKELDDLFWRFKSVAEKKKKITDDDLVALMSDEVFQPQFVWQLQNVQVTSGSLGLSTATVKLIDADGREHISCSVGTGPVDAAYKAVDLIVKVPVTLLEYSMNAVTQGIDAIASTRVLIRGENGHTSTHAVTGETIHRTFSGTGADMDIVISSVRAYVGALNKMMSFRKLMAKNNKPESSAVV*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="+" PGL_start="52777" PGL_stop="54466"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="52777" e_stop="54466"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.988"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.988">
            <gDNA_exon_boundary e_start="52777" e_stop="54466" e_length="1690"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52777" stop="53601"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E719295" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52794" stop="53570"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E327006" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52817" stop="53548"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E550500" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52817" stop="53546"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E550504" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52818" stop="53378"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E369173" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52818" stop="53370"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E241929" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52823" stop="53543"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E549923" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="53340" stop="54033"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E340697" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="53704" stop="54438"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E369172" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="53838" stop="54466"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E321749" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="53910" stop="54419"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E312635" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TAGTCCCGACAAGAGACCACAATTGTAATTTTTGCATTTGCTTGCGTATGTCACTCCAGAGGAGCCTCGACTCTTCTTCACAAGCGAAACAACTAAAACCCCTCTTTCTAATTACATTGATTTTCTAGCAACATTTCCTCAAGAAATCTGTAAGTATTCATACATTCAATTTTGCTTGTTTTTAGATTTGGGGTACCATCAAATTCTCTAAATTTATTGAAATTTGATAGCTTGATTGATCTTCGTACAAAGTATTCTTAGTTGTATTGGATCTGAATAGGATTGCAATCAAGAAATTCTGAAGTTGGGTTTGCTGATTTGGGTCTTTATGTGATTTGACGTTCAATAAATTAGTCTGAAGTGCAAGATTCTTGATTTTCTGATTTGGGGTTTTCTATATCTGTTTCAAGATTCAATTTTTCTGAGGATTCTGTATTGAATTTGATTAATGACATTACAAGAAGGTTAAATAAAGGGGAGGAAGTAGTGTATTTGTAAGCATTTTAGCAATAAAGTTGAAGAAGGAATTGTGAGTAACTGAGGGGGTTAAAGGTTTCTTCACATGGGGAAACCATTGTTTTATGAGATATTGGAGAAGCCAGCAACCAGTTGTGCAATTGGAATATGTAGTGCAATTTGGTTTTATATTCAGAAGTCAAATATTGGTTATTCACATGTTGGTTTGAGTTATGAAACTGCTTTGGAGGGTCATTATTGGAGGATAATAACATCAGCACTTTCACATATTAGTGTGCTTCATCTTGTTTTCAATATGAGTGCACTTTGGAGTCTTGGAGTTGTTGAACAATTGGGGCATTTAGGTCTTGGTGTGCAGTATTATCTTCATTATACACTGGTGTTGGTTGTTCTTTCGGGCATGCTTGTCATCGGAATGTACCATATCTTGATTCAGAAATTTAAGCTAGAGTATTTTCGGAGAGTTACTGCTGTTGGATATTCTTGTGTGGTGTTTGGTTGGATGACGATTCTTTCGGTCAAGCAACCGTCGTCAAAGTTGAATCTTTTTGGTTTTCTTTCACTTCCGATCAGCTTTGCGCCATTTGAGTCGCTCATATTCACTTCCATTATTGTTCCTCAAGCGAGTTTTATTGGACATTTATCGGGAATTATTGTTGGTTATGCTGTTGGTTGGGGTTTGATACATGGGATGAACAATTACTGGGCAGTTACAATGCTGGGATGGACTGTGCTTGTGTTTGTTTTCAGTTTGAAAAAGTCTGGTACATTTGATTTGAACTTTCTTGAGATTGAACCTGTCACGGATCCCTCTCTGCCTTCGGTACGTTTTTTCGCAGCTGGAACTGGTAGAAGTTTACAGATGAGTACGTTACCAGATGCTGGTGCAGATATTGTATAGCTTTTGGAAGATTTCATTGCTTACTTGGGGATCATGACGTAATTCTAGTATTAGCATTTTGCTGGATGACTTGTTGATTATGCATACTTACCTCCAAAACCATCATTTACCTGGTGATACATTCATTGGTTCTCGAAAACCTGTTTGTTAATTGAACCAACTTTTTAGGTAACCACTGTCATTTATAACTGTGGTGCGAAAAGTTGTTATTACATTTTATATGATATAGATGAACCATGATGTATTCCACTTAACACTAAATTTTTGTGATTGCTTTAGCCTTTGTGTCCTATCTATGCATTATAAATGATT</gDNA_template>
            <first_frame> *  S  R  Q  E  T  T  I  V  I  F  A  F  A  C  V  C  H  S  R  G  A  S  T  L  L  H  K  R  N  N  *  N  P  S  F  *  L  H  *  F  S  S  N  I  S  S  R  N  L  *  V  F  I  H  S  I  L  L  V  F  R  F  G  V  P  S  N  S  L  N  L  L  K  F  D  S  L  I  D  L  R  T  K  Y  S  *  L  Y  W  I  *  I  G  L  Q  S  R  N  S  E  V  G  F  A  D  L  G  L  Y  V  I  *  R  S  I  N  *  S  E  V  Q  D  S  *  F  S  D  L  G  F  S  I  S  V  S  R  F  N  F  S  E  D  S  V  L  N  L  I  N  D  I  T  R  R  L  N  K  G  E  E  V  V  Y  L  *  A  F  *  Q  *  S  *  R  R  N  C  E  *  L  R  G  L  K  V  S  S  H  G  E  T  I  V  L  *  D  I  G  E  A  S  N  Q  L  C  N  W  N  M  *  C  N  L  V  L  Y  S  E  V  K  Y  W  L  F  T  C  W  F  E  L  *  N  C  F  G  G  S  L  L  E  D  N  N  I  S  T  F  T  Y  *  C  A  S  S  C  F  Q  Y  E  C  T  L  E  S  W  S  C  *  T  I  G  A  F  R  S  W  C  A  V  L  S  S  L  Y  T  G  V  G  C  S  F  G  H  A  C  H  R  N  V  P  Y  L  D  S  E  I  *  A  R  V  F  S  E  S  Y  C  C  W  I  F  L  C  G  V  W  L  D  D  D  S  F  G  Q  A  T  V  V  K  V  E  S  F  W  F  S  F  T  S  D  Q  L  C  A  I  *  V  A  H  I  H  F  H  Y  C  S  S  S  E  F  Y  W  T  F  I  G  N  Y  C  W  L  C  C  W  L  G  F  D  T  W  D  E  Q  L  L  G  S  Y  N  A  G  M  D  C  A  C  V  C  F  Q  F  E  K  V  W  Y  I  *  F  E  L  S  *  D  *  T  C  H  G  S  L  S  A  F  G  T  F  F  R  S  W  N  W  *  K  F  T  D  E  Y  V  T  R  C  W  C  R  Y  C  I  A  F  G  R  F  H  C  L  L  G  D  H  D  V  I  L  V  L  A  F  C  W  M  T  C  *  L  C  I  L  T  S  K  T  I  I  Y  L  V  I  H  S  L  V  L  E  N  L  F  V  N  *  T  N  F  L  G  N  H  C  H  L  *  L  W  C  E  K  L  L  L  H  F  I  *  Y  R  *  T  M  M  Y  S  T  *  H  *  I  F  V  I  A  L  A  F  V  S  Y  L  C  I  I  N  D  </first_frame>
            <second_frame>  S  P  D  K  R  P  Q  L  *  F  L  H  L  L  A  Y  V  T  P  E  E  P  R  L  F  F  T  S  E  T  T  K  T  P  L  S  N  Y  I  D  F  L  A  T  F  P  Q  E  I  C  K  Y  S  Y  I  Q  F  C  L  F  L  D  L  G  Y  H  Q  I  L  *  I  Y  *  N  L  I  A  *  L  I  F  V  Q  S  I  L  S  C  I  G  S  E  *  D  C  N  Q  E  I  L  K  L  G  L  L  I  W  V  F  M  *  F  D  V  Q  *  I  S  L  K  C  K  I  L  D  F  L  I  W  G  F  L  Y  L  F  Q  D  S  I  F  L  R  I  L  Y  *  I  *  L  M  T  L  Q  E  G  *  I  K  G  R  K  *  C  I  C  K  H  F  S  N  K  V  E  E  G  I  V  S  N  *  G  G  *  R  F  L  H  M  G  K  P  L  F  Y  E  I  L  E  K  P  A  T  S  C  A  I  G  I  C  S  A  I  W  F  Y  I  Q  K  S  N  I  G  Y  S  H  V  G  L  S  Y  E  T  A  L  E  G  H  Y  W  R  I  I  T  S  A  L  S  H  I  S  V  L  H  L  V  F  N  M  S  A  L  W  S  L  G  V  V  E  Q  L  G  H  L  G  L  G  V  Q  Y  Y  L  H  Y  T  L  V  L  V  V  L  S  G  M  L  V  I  G  M  Y  H  I  L  I  Q  K  F  K  L  E  Y  F  R  R  V  T  A  V  G  Y  S  C  V  V  F  G  W  M  T  I  L  S  V  K  Q  P  S  S  K  L  N  L  F  G  F  L  S  L  P  I  S  F  A  P  F  E  S  L  I  F  T  S  I  I  V  P  Q  A  S  F  I  G  H  L  S  G  I  I  V  G  Y  A  V  G  W  G  L  I  H  G  M  N  N  Y  W  A  V  T  M  L  G  W  T  V  L  V  F  V  F  S  L  K  K  S  G  T  F  D  L  N  F  L  E  I  E  P  V  T  D  P  S  L  P  S  V  R  F  F  A  A  G  T  G  R  S  L  Q  M  S  T  L  P  D  A  G  A  D  I  V  *  L  L  E  D  F  I  A  Y  L  G  I  M  T  *  F  *  Y  *  H  F  A  G  *  L  V  D  Y  A  Y  L  P  P  K  P  S  F  T  W  *  Y  I  H  W  F  S  K  T  C  L  L  I  E  P  T  F  *  V  T  T  V  I  Y  N  C  G  A  K  S  C  Y  Y  I  L  Y  D  I  D  E  P  *  C  I  P  L  N  T  K  F  L  *  L  L  *  P  L  C  P  I  Y  A  L  *  M  I </second_frame>
            <third_frame>   V  P  T  R  D  H  N  C  N  F  C  I  C  L  R  M  S  L  Q  R  S  L  D  S  S  S  Q  A  K  Q  L  K  P  L  F  L  I  T  L  I  F  *  Q  H  F  L  K  K  S  V  S  I  H  T  F  N  F  A  C  F  *  I  W  G  T  I  K  F  S  K  F  I  E  I  *  *  L  D  *  S  S  Y  K  V  F  L  V  V  L  D  L  N  R  I  A  I  K  K  F  *  S  W  V  C  *  F  G  S  L  C  D  L  T  F  N  K  L  V  *  S  A  R  F  L  I  F  *  F  G  V  F  Y  I  C  F  K  I  Q  F  F  *  G  F  C  I  E  F  D  *  *  H  Y  K  K  V  K  *  R  G  G  S  S  V  F  V  S  I  L  A  I  K  L  K  K  E  L  *  V  T  E  G  V  K  G  F  F  T  W  G  N  H  C  F  M  R  Y  W  R  S  Q  Q  P  V  V  Q  L  E  Y  V  V  Q  F  G  F  I  F  R  S  Q  I  L  V  I  H  M  L  V  *  V  M  K  L  L  W  R  V  I  I  G  G  *  *  H  Q  H  F  H  I  L  V  C  F  I  L  F  S  I  *  V  H  F  G  V  L  E  L  L  N  N  W  G  I  *  V  L  V  C  S  I  I  F  I  I  H  W  C  W  L  F  F  R  A  C  L  S  S  E  C  T  I  S  *  F  R  N  L  S  *  S  I  F  G  E  L  L  L  L  D  I  L  V  W  C  L  V  G  *  R  F  F  R  S  S  N  R  R  Q  S  *  I  F  L  V  F  F  H  F  R  S  A  L  R  H  L  S  R  S  Y  S  L  P  L  L  F  L  K  R  V  L  L  D  I  Y  R  E  L  L  L  V  M  L  L  V  G  V  *  Y  M  G  *  T  I  T  G  Q  L  Q  C  W  D  G  L  C  L  C  L  F  S  V  *  K  S  L  V  H  L  I  *  T  F  L  R  L  N  L  S  R  I  P  L  C  L  R  Y  V  F  S  Q  L  E  L  V  E  V  Y  R  *  V  R  Y  Q  M  L  V  Q  I  L  Y  S  F  W  K  I  S  L  L  T  W  G  S  *  R  N  S  S  I  S  I  L  L  D  D  L  L  I  M  H  T  Y  L  Q  N  H  H  L  P  G  D  T  F  I  G  S  R  K  P  V  C  *  L  N  Q  L  F  R  *  P  L  S  F  I  T  V  V  R  K  V  V  I  T  F  Y  M  I  *  M  N  H  D  V  F  H  L  T  L  N  F  C  D  C  F  S  L  C  V  L  S  M  H  Y  K  *   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0167M06.1" strand="+"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="53327" stop="54154"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>825</number_coding_nucleotides>
                  <number_encoded_amino_acids>275</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RFLHMGKPLFYEILEKPATSCAIGICSAIWFYIQKSNIGYSHVGLSYETALEGHYWRIITSALSHISVLHLVFNMSALWSLGVVEQLGHLGLGVQYYLHYTLVLVVLSGMLVIGMYHILIQKFKLEYFRRVTAVGYSCVVFGWMTILSVKQPSSKLNLFGFLSLPISFAPFESLIFTSIIVPQASFIGHLSGIIVGYAVGWGLIHGMNNYWAVTMLGWTVLVFVFSLKKSGTFDLNFLEIEPVTDPSLPSVRFFAAGTGRSLQMSTLPDAGADIV*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="52793" e_stop="52925"/>
            <exon e_start="53057" e_stop="54466"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.883" acc_prob="0.870" e_score="1.000"/>
          <exon-only e_score="0.992"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="52793" e_stop="52925" e_length="133"/>
          </exon>
          <intron i_serial="1" don_prob="0.883" acc_prob="0.870">
            <gDNA_intron_boundary i_start="52926" i_stop="53056" i_length="131"/>
          </intron>
          <exon e_serial="2" e_score="0.992">
            <gDNA_exon_boundary e_start="53057" e_stop="54466" e_length="1410"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52793" stop="52925"/>
              <exon start="53057" stop="53478"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E314383" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="53340" stop="54033"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E340697" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="53704" stop="54438"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E369172" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="53838" stop="54466"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E321749" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="53910" stop="54419"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E312635" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CCACAATTGTAATTTTTGCATTTGCTTGCGTATGTCACTCCAGAGGAGCCTCGACTCTTCTTCACAAGCGAAACAACTAAAACCCCTCTTTCTAATTACATTGATTTTCTAGCAACATTTCCTCAAGAAATCT : GATTGCAATCAAGAAATTCTGAAGTTGGGTTTGCTGATTTGGGTCTTTATGTGATTTGACGTTCAATAAATTAGTCTGAAGTGCAAGATTCTTGATTTTCTGATTTGGGGTTTTCTATATCTGTTTCAAGATTCAATTTTTCTGAGGATTCTGTATTGAATTTGATTAATGACATTACAAGAAGGTTAAATAAAGGGGAGGAAGTAGTGTATTTGTAAGCATTTTAGCAATAAAGTTGAAGAAGGAATTGTGAGTAACTGAGGGGGTTAAAGGTTTCTTCACATGGGGAAACCATTGTTTTATGAGATATTGGAGAAGCCAGCAACCAGTTGTGCAATTGGAATATGTAGTGCAATTTGGTTTTATATTCAGAAGTCAAATATTGGTTATTCACATGTTGGTTTGAGTTATGAAACTGCTTTGGAGGGTCATTATTGGAGGATAATAACATCAGCACTTTCACATATTAGTGTGCTTCATCTTGTTTTCAATATGAGTGCACTTTGGAGTCTTGGAGTTGTTGAACAATTGGGGCATTTAGGTCTTGGTGTGCAGTATTATCTTCATTATACACTGGTGTTGGTTGTTCTTTCGGGCATGCTTGTCATCGGAATGTACCATATCTTGATTCAGAAATTTAAGCTAGAGTATTTTCGGAGAGTTACTGCTGTTGGATATTCTTGTGTGGTGTTTGGTTGGATGACGATTCTTTCGGTCAAGCAACCGTCGTCAAAGTTGAATCTTTTTGGTTTTCTTTCACTTCCGATCAGCTTTGCGCCATTTGAGTCGCTCATATTCACTTCCATTATTGTTCCTCAAGCGAGTTTTATTGGACATTTATCGGGAATTATTGTTGGTTATGCTGTTGGTTGGGGTTTGATACATGGGATGAACAATTACTGGGCAGTTACAATGCTGGGATGGACTGTGCTTGTGTTTGTTTTCAGTTTGAAAAAGTCTGGTACATTTGATTTGAACTTTCTTGAGATTGAACCTGTCACGGATCCCTCTCTGCCTTCGGTACGTTTTTTCGCAGCTGGAACTGGTAGAAGTTTACAGATGAGTACGTTACCAGATGCTGGTGCAGATATTGTATAGCTTTTGGAAGATTTCATTGCTTACTTGGGGATCATGACGTAATTCTAGTATTAGCATTTTGCTGGATGACTTGTTGATTATGCATACTTACCTCCAAAACCATCATTTACCTGGTGATACATTCATTGGTTCTCGAAAACCTGTTTGTTAATTGAACCAACTTTTTAGGTAACCACTGTCATTTATAACTGTGGTGCGAAAAGTTGTTATTACATTTTATATGATATAGATGAACCATGATGTATTCCACTTAACACTAAATTTTTGTGATTGCTTTAGCCTTTGTGTCCTATCTATGCATTATAAATGATT</gDNA_template>
            <first_frame> P  Q  L  *  F  L  H  L  L  A  Y  V  T  P  E  E  P  R  L  F  F  T  S  E  T  T  K  T  P  L  S  N  Y  I  D  F  L  A  T  F  P  Q  E  I   : *  L  Q  S  R  N  S  E  V  G  F  A  D  L  G  L  Y  V  I  *  R  S  I  N  *  S  E  V  Q  D  S  *  F  S  D  L  G  F  S  I  S  V  S  R  F  N  F  S  E  D  S  V  L  N  L  I  N  D  I  T  R  R  L  N  K  G  E  E  V  V  Y  L  *  A  F  *  Q  *  S  *  R  R  N  C  E  *  L  R  G  L  K  V  S  S  H  G  E  T  I  V  L  *  D  I  G  E  A  S  N  Q  L  C  N  W  N  M  *  C  N  L  V  L  Y  S  E  V  K  Y  W  L  F  T  C  W  F  E  L  *  N  C  F  G  G  S  L  L  E  D  N  N  I  S  T  F  T  Y  *  C  A  S  S  C  F  Q  Y  E  C  T  L  E  S  W  S  C  *  T  I  G  A  F  R  S  W  C  A  V  L  S  S  L  Y  T  G  V  G  C  S  F  G  H  A  C  H  R  N  V  P  Y  L  D  S  E  I  *  A  R  V  F  S  E  S  Y  C  C  W  I  F  L  C  G  V  W  L  D  D  D  S  F  G  Q  A  T  V  V  K  V  E  S  F  W  F  S  F  T  S  D  Q  L  C  A  I  *  V  A  H  I  H  F  H  Y  C  S  S  S  E  F  Y  W  T  F  I  G  N  Y  C  W  L  C  C  W  L  G  F  D  T  W  D  E  Q  L  L  G  S  Y  N  A  G  M  D  C  A  C  V  C  F  Q  F  E  K  V  W  Y  I  *  F  E  L  S  *  D  *  T  C  H  G  S  L  S  A  F  G  T  F  F  R  S  W  N  W  *  K  F  T  D  E  Y  V  T  R  C  W  C  R  Y  C  I  A  F  G  R  F  H  C  L  L  G  D  H  D  V  I  L  V  L  A  F  C  W  M  T  C  *  L  C  I  L  T  S  K  T  I  I  Y  L  V  I  H  S  L  V  L  E  N  L  F  V  N  *  T  N  F  L  G  N  H  C  H  L  *  L  W  C  E  K  L  L  L  H  F  I  *  Y  R  *  T  M  M  Y  S  T  *  H  *  I  F  V  I  A  L  A  F  V  S  Y  L  C  I  I  N  D  </first_frame>
            <second_frame>  H  N  C  N  F  C  I  C  L  R  M  S  L  Q  R  S  L  D  S  S  S  Q  A  K  Q  L  K  P  L  F  L  I  T  L  I  F  *  Q  H  F  L  K  K  S  :  D  C  N  Q  E  I  L  K  L  G  L  L  I  W  V  F  M  *  F  D  V  Q  *  I  S  L  K  C  K  I  L  D  F  L  I  W  G  F  L  Y  L  F  Q  D  S  I  F  L  R  I  L  Y  *  I  *  L  M  T  L  Q  E  G  *  I  K  G  R  K  *  C  I  C  K  H  F  S  N  K  V  E  E  G  I  V  S  N  *  G  G  *  R  F  L  H  M  G  K  P  L  F  Y  E  I  L  E  K  P  A  T  S  C  A  I  G  I  C  S  A  I  W  F  Y  I  Q  K  S  N  I  G  Y  S  H  V  G  L  S  Y  E  T  A  L  E  G  H  Y  W  R  I  I  T  S  A  L  S  H  I  S  V  L  H  L  V  F  N  M  S  A  L  W  S  L  G  V  V  E  Q  L  G  H  L  G  L  G  V  Q  Y  Y  L  H  Y  T  L  V  L  V  V  L  S  G  M  L  V  I  G  M  Y  H  I  L  I  Q  K  F  K  L  E  Y  F  R  R  V  T  A  V  G  Y  S  C  V  V  F  G  W  M  T  I  L  S  V  K  Q  P  S  S  K  L  N  L  F  G  F  L  S  L  P  I  S  F  A  P  F  E  S  L  I  F  T  S  I  I  V  P  Q  A  S  F  I  G  H  L  S  G  I  I  V  G  Y  A  V  G  W  G  L  I  H  G  M  N  N  Y  W  A  V  T  M  L  G  W  T  V  L  V  F  V  F  S  L  K  K  S  G  T  F  D  L  N  F  L  E  I  E  P  V  T  D  P  S  L  P  S  V  R  F  F  A  A  G  T  G  R  S  L  Q  M  S  T  L  P  D  A  G  A  D  I  V  *  L  L  E  D  F  I  A  Y  L  G  I  M  T  *  F  *  Y  *  H  F  A  G  *  L  V  D  Y  A  Y  L  P  P  K  P  S  F  T  W  *  Y  I  H  W  F  S  K  T  C  L  L  I  E  P  T  F  *  V  T  T  V  I  Y  N  C  G  A  K  S  C  Y  Y  I  L  Y  D  I  D  E  P  *  C  I  P  L  N  T  K  F  L  *  L  L  *  P  L  C  P  I  Y  A  L  *  M  I </second_frame>
            <third_frame>   T  I  V  I  F  A  F  A  C  V  C  H  S  R  G  A  S  T  L  L  H  K  R  N  N  *  N  P  S  F  *  L  H  *  F  S  S  N  I  S  S  R  N  L :   I  A  I  K  K  F  *  S  W  V  C  *  F  G  S  L  C  D  L  T  F  N  K  L  V  *  S  A  R  F  L  I  F  *  F  G  V  F  Y  I  C  F  K  I  Q  F  F  *  G  F  C  I  E  F  D  *  *  H  Y  K  K  V  K  *  R  G  G  S  S  V  F  V  S  I  L  A  I  K  L  K  K  E  L  *  V  T  E  G  V  K  G  F  F  T  W  G  N  H  C  F  M  R  Y  W  R  S  Q  Q  P  V  V  Q  L  E  Y  V  V  Q  F  G  F  I  F  R  S  Q  I  L  V  I  H  M  L  V  *  V  M  K  L  L  W  R  V  I  I  G  G  *  *  H  Q  H  F  H  I  L  V  C  F  I  L  F  S  I  *  V  H  F  G  V  L  E  L  L  N  N  W  G  I  *  V  L  V  C  S  I  I  F  I  I  H  W  C  W  L  F  F  R  A  C  L  S  S  E  C  T  I  S  *  F  R  N  L  S  *  S  I  F  G  E  L  L  L  L  D  I  L  V  W  C  L  V  G  *  R  F  F  R  S  S  N  R  R  Q  S  *  I  F  L  V  F  F  H  F  R  S  A  L  R  H  L  S  R  S  Y  S  L  P  L  L  F  L  K  R  V  L  L  D  I  Y  R  E  L  L  L  V  M  L  L  V  G  V  *  Y  M  G  *  T  I  T  G  Q  L  Q  C  W  D  G  L  C  L  C  L  F  S  V  *  K  S  L  V  H  L  I  *  T  F  L  R  L  N  L  S  R  I  P  L  C  L  R  Y  V  F  S  Q  L  E  L  V  E  V  Y  R  *  V  R  Y  Q  M  L  V  Q  I  L  Y  S  F  W  K  I  S  L  L  T  W  G  S  *  R  N  S  S  I  S  I  L  L  D  D  L  L  I  M  H  T  Y  L  Q  N  H  H  L  P  G  D  T  F  I  G  S  R  K  P  V  C  *  L  N  Q  L  F  R  *  P  L  S  F  I  T  V  V  R  K  V  V  I  T  F  Y  M  I  *  M  N  H  D  V  F  H  L  T  L  N  F  C  D  C  F  S  L  C  V  L  S  M  H  Y  K  *   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0167M06.1" strand="+"/>
                <serials PGL_serial="3" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="53327" stop="54154"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>825</number_coding_nucleotides>
                  <number_encoded_amino_acids>275</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RFLHMGKPLFYEILEKPATSCAIGICSAIWFYIQKSNIGYSHVGLSYETALEGHYWRIITSALSHISVLHLVFNMSALWSLGVVEQLGHLGLGVQYYLHYTLVLVVLSGMLVIGMYHILIQKFKLEYFRRVTAVGYSCVVFGWMTILSVKQPSSKLNLFGFLSLPISFAPFESLIFTSIIVPQASFIGHLSGIIVGYAVGWGLIHGMNNYWAVTMLGWTVLVFVFSLKKSGTFDLNFLEIEPVTDPSLPSVRFFAAGTGRSLQMSTLPDAGADIV*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="-" PGL_start="61685" PGL_stop="56528"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="61685" e_stop="61563"/>
            <exon e_start="59071" e_stop="58109"/>
            <exon e_start="56778" e_stop="56528"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.993" e_score="0.846"/>
          <exon-intron don_prob="0.997" acc_prob="0.998" e_score="1.000"/>
          <exon-only e_score="0.964"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.846">
            <gDNA_exon_boundary e_start="61685" e_stop="61563" e_length="123"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.993">
            <gDNA_intron_boundary i_start="61562" i_stop="59072" i_length="2491"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="59071" e_stop="58109" e_length="963"/>
          </exon>
          <intron i_serial="2" don_prob="0.997" acc_prob="0.998">
            <gDNA_intron_boundary i_start="58108" i_stop="56779" i_length="1330"/>
          </intron>
          <exon e_serial="3" e_score="0.964">
            <gDNA_exon_boundary e_start="56778" e_stop="56528" e_length="251"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61685" stop="61563"/>
              <exon start="59071" stop="58848"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E595272" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61590" stop="61563"/>
              <exon start="59071" stop="58427"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E375829" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58551" stop="58109"/>
              <exon start="56778" stop="56528"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E375828" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ATAATTCCTAATAACCAAAAAAAACTTTATTTTATTTCCTCTTTTTTCTCTTCCATTTTGACAATTCTATTTTCACGATCATTATTTAAAACAGAAACAAGACCTGATCAAACTCTGTTCGAG : ATTGTTTTCATTGCATATGGCCAATCTTGATGGAGATAACGAACCTGAATGGATAAAGAGGGTGAAATCAGAAGGTTCCATTCCCTTTCTGGACCCAGATAATTGCTCAAACGGTTGGGCTTCTCCACCAGGGAATAGTTTCATGGTAAGAGGTCCAGAATACTTTTCAACAAAGGTTAAAGTTCCCGGTGGTGAATTTCTTCTGAAACCTCTTGGTTTTGACTGGATAAAAGGTCCTAAAAAGATTTCTGATATTCTAAATAATCCAAAACACCGTATCAGGATGGCTCTTCAAGATGAAACTCCAACTGGTTGCAAGCCCTTTATTTGGGCTTTCAACTTGCAAGTTCCTAGTAAGGAAAATTTCAGTGCTGTTGTATATTTTGTGGGCCTCGAACCCGTCCCTGAAGGGTCTTTGATGGAGCAGTTCTTGAAAGGAGATGATGCATTTAGAACTAAAAGGTTAAAATTGATTGCGAATATTGTTAAAGGACCTTGGATTGTAAGAAAGGCAGTTGGGGAGCAAGCTATATGCGTAATTGGCCGTGCACTGACTTGCAAGTACTCTATAGCAGACGATTTCATAGAGGTAGATGTTGATATAGGATCTTCGGTGATAGCAAATGCGATTGTTCATCTCGCGTATAATTATATATCAACTCTTACTGTTGATTTAGCCTTCCTTATCGAGAGTCAAACTCAATCAGAACTTCCAGAACGGATTTTAGGAGCGGTAAGATTTTCGGAGCTGCAGACCAGTTCAGCAACACTAGTTGAAATGCCATCCAATGGGAACATGGGAGAGTTCCTTCCTTCTTTCCCTTCAAGGTTATGGAAGTCATTTGGAAACAGTTTCTCCCACCTTGTTCAGGCAGATACTCAAGATGGTAGCTCCAGCTCCAGCCCCTCACTTGTAAAGGAGGTTGTTGATAATGGTCTCTCTGAAGAAGGTACCAAAAAATG : ATCTCCACACTGTAAATATGATGCATTTCTGAAACGTTCAATGGCTCCAGGCTCGGAGAATTCTATTATTGCGGTCTCATATTGTTGGTTGTGATGGCTACATTCACCGCTATTTATAGCTGTAGAAATTACGTACTACAAAAATATGTATACATTTCTGGGGAGCGATTTAGCGACATGGAACTCCAGTAGCATTCTTCACTATTAGCCTCTGCTCATCTTCTCATTTCTTTCTGAAAAAGAAAAAAAAT</gDNA_template>
            <first_frame> I  I  P  N  N  Q  K  K  L  Y  F  I  S  S  F  F  S  S  I  L  T  I  L  F  S  R  S  L  F  K  T  E  T  R  P  D  Q  T  L  F  E  :  I  V  F  I  A  Y  G  Q  S  *  W  R  *  R  T  *  M  D  K  E  G  E  I  R  R  F  H  S  L  S  G  P  R  *  L  L  K  R  L  G  F  S  T  R  E  *  F  H  G  K  R  S  R  I  L  F  N  K  G  *  S  S  R  W  *  I  S  S  E  T  S  W  F  *  L  D  K  R  S  *  K  D  F  *  Y  S  K  *  S  K  T  P  Y  Q  D  G  S  S  R  *  N  S  N  W  L  Q  A  L  Y  L  G  F  Q  L  A  S  S  *  *  G  K  F  Q  C  C  C  I  F  C  G  P  R  T  R  P  *  R  V  F  D  G  A  V  L  E  R  R  *  C  I  *  N  *  K  V  K  I  D  C  E  Y  C  *  R  T  L  D  C  K  K  G  S  W  G  A  S  Y  M  R  N  W  P  C  T  D  L  Q  V  L  Y  S  R  R  F  H  R  G  R  C  *  Y  R  I  F  G  D  S  K  C  D  C  S  S  R  V  *  L  Y  I  N  S  Y  C  *  F  S  L  P  Y  R  E  S  N  S  I  R  T  S  R  T  D  F  R  S  G  K  I  F  G  A  A  D  Q  F  S  N  T  S  *  N  A  I  Q  W  E  H  G  R  V  P  S  F  F  P  F  K  V  M  E  V  I  W  K  Q  F  L  P  P  C  S  G  R  Y  S  R  W  *  L  Q  L  Q  P  L  T  C  K  G  G  C  *  *  W  S  L  *  R  R  Y  Q  K  M  :  I  S  T  L  *  I  *  C  I  S  E  T  F  N  G  S  R  L  G  E  F  Y  Y  C  G  L  I  L  L  V  V  M  A  T  F  T  A  I  Y  S  C  R  N  Y  V  L  Q  K  Y  V  Y  I  S  G  E  R  F  S  D  M  E  L  Q  *  H  S  S  L  L  A  S  A  H  L  L  I  S  F  *  K  R  K  K   </first_frame>
            <second_frame>  *  F  L  I  T  K  K  N  F  I  L  F  P  L  F  S  L  P  F  *  Q  F  Y  F  H  D  H  Y  L  K  Q  K  Q  D  L  I  K  L  C  S  R :   L  F  S  L  H  M  A  N  L  D  G  D  N  E  P  E  W  I  K  R  V  K  S  E  G  S  I  P  F  L  D  P  D  N  C  S  N  G  W  A  S  P  P  G  N  S  F  M  V  R  G  P  E  Y  F  S  T  K  V  K  V  P  G  G  E  F  L  L  K  P  L  G  F  D  W  I  K  G  P  K  K  I  S  D  I  L  N  N  P  K  H  R  I  R  M  A  L  Q  D  E  T  P  T  G  C  K  P  F  I  W  A  F  N  L  Q  V  P  S  K  E  N  F  S  A  V  V  Y  F  V  G  L  E  P  V  P  E  G  S  L  M  E  Q  F  L  K  G  D  D  A  F  R  T  K  R  L  K  L  I  A  N  I  V  K  G  P  W  I  V  R  K  A  V  G  E  Q  A  I  C  V  I  G  R  A  L  T  C  K  Y  S  I  A  D  D  F  I  E  V  D  V  D  I  G  S  S  V  I  A  N  A  I  V  H  L  A  Y  N  Y  I  S  T  L  T  V  D  L  A  F  L  I  E  S  Q  T  Q  S  E  L  P  E  R  I  L  G  A  V  R  F  S  E  L  Q  T  S  S  A  T  L  V  E  M  P  S  N  G  N  M  G  E  F  L  P  S  F  P  S  R  L  W  K  S  F  G  N  S  F  S  H  L  V  Q  A  D  T  Q  D  G  S  S  S  S  S  P  S  L  V  K  E  V  V  D  N  G  L  S  E  E  G  T  K  K  * :   S  P  H  C  K  Y  D  A  F  L  K  R  S  M  A  P  G  S  E  N  S  I  I  A  V  S  Y  C  W  L  *  W  L  H  S  P  L  F  I  A  V  E  I  T  Y  Y  K  N  M  Y  T  F  L  G  S  D  L  A  T  W  N  S  S  S  I  L  H  Y  *  P  L  L  I  F  S  F  L  S  E  K  E  K  K  </second_frame>
            <third_frame>   N  S  *  *  P  K  K  T  L  F  Y  F  L  F  F  L  F  H  F  D  N  S  I  F  T  I  I  I  *  N  R  N  K  T  *  S  N  S  V  R   : D  C  F  H  C  I  W  P  I  L  M  E  I  T  N  L  N  G  *  R  G  *  N  Q  K  V  P  F  P  F  W  T  Q  I  I  A  Q  T  V  G  L  L  H  Q  G  I  V  S  W  *  E  V  Q  N  T  F  Q  Q  R  L  K  F  P  V  V  N  F  F  *  N  L  L  V  L  T  G  *  K  V  L  K  R  F  L  I  F  *  I  I  Q  N  T  V  S  G  W  L  F  K  M  K  L  Q  L  V  A  S  P  L  F  G  L  S  T  C  K  F  L  V  R  K  I  S  V  L  L  Y  I  L  W  A  S  N  P  S  L  K  G  L  *  W  S  S  S  *  K  E  M  M  H  L  E  L  K  G  *  N  *  L  R  I  L  L  K  D  L  G  L  *  E  R  Q  L  G  S  K  L  Y  A  *  L  A  V  H  *  L  A  S  T  L  *  Q  T  I  S  *  R  *  M  L  I  *  D  L  R  *  *  Q  M  R  L  F  I  S  R  I  I  I  Y  Q  L  L  L  L  I  *  P  S  L  S  R  V  K  L  N  Q  N  F  Q  N  G  F  *  E  R  *  D  F  R  S  C  R  P  V  Q  Q  H  *  L  K  C  H  P  M  G  T  W  E  S  S  F  L  L  S  L  Q  G  Y  G  S  H  L  E  T  V  S  P  T  L  F  R  Q  I  L  K  M  V  A  P  A  P  A  P  H  L  *  R  R  L  L  I  M  V  S  L  K  K  V  P  K  N   : D  L  H  T  V  N  M  M  H  F  *  N  V  Q  W  L  Q  A  R  R  I  L  L  L  R  S  H  I  V  G  C  D  G  Y  I  H  R  Y  L  *  L  *  K  L  R  T  T  K  I  C  I  H  F  W  G  A  I  *  R  H  G  T  P  V  A  F  F  T  I  S  L  C  S  S  S  H  F  F  L  K  K  K  K  N </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0167M06.1" strand="-"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="61624" stop="61563"/>
                    <exon start="59071" stop="56778"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1023</number_coding_nucleotides>
                  <number_encoded_amino_acids>341</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QFYFHDHYLKQKQDLIKLCSRLFSLHMANLDGDNEPEWIKRVKSEGSIPFLDPDNCSNGWASPPGNSFMVRGPEYFSTKVKVPGGEFLLKPLGFDWIKGPKKISDILNNPKHRIRMALQDETPTGCKPFIWAFNLQVPSKENFSAVVYFVGLEPVPEGSLMEQFLKGDDAFRTKRLKLIANIVKGPWIVRKAVGEQAICVIGRALTCKYSIADDFIEVDVDIGSSVIANAIVHLAYNYISTLTVDLAFLIESQTQSELPERILGAVRFSELQTSSATLVEMPSNGNMGEFLPSFPSRLWKSFGNSFSHLVQADTQDGSSSSSPSLVKEVVDNGLSEEGTKK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="-" PGL_start="72139" PGL_stop="64164"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="72028" e_stop="71949"/>
            <exon e_start="71733" e_stop="71728"/>
            <exon e_start="71674" e_stop="70623"/>
            <exon e_start="66698" e_stop="66566"/>
            <exon e_start="66312" e_stop="66228"/>
            <exon e_start="65173" e_stop="64247"/>
            <exon e_start="64176" e_stop="64166"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.000" e_score="0.975"/>
          <exon-intron don_prob="0.900" acc_prob="0.999" e_score="0.500"/>
          <exon-intron don_prob="1.000" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.990" e_score="1.000"/>
          <exon-intron don_prob="0.867" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.962" e_score="0.945"/>
          <exon-only e_score="0.636"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.975">
            <gDNA_exon_boundary e_start="72028" e_stop="71949" e_length="80"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.000">
            <gDNA_intron_boundary i_start="71948" i_stop="71734" i_length="215"/>
          </intron>
          <exon e_serial="2" e_score="0.500">
            <gDNA_exon_boundary e_start="71733" e_stop="71728" e_length="6"/>
          </exon>
          <intron i_serial="2" don_prob="0.900" acc_prob="0.999">
            <gDNA_intron_boundary i_start="71727" i_stop="71675" i_length="53"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="71674" e_stop="70623" e_length="1052"/>
          </exon>
          <intron i_serial="3" don_prob="1.000" acc_prob="0.996">
            <gDNA_intron_boundary i_start="70622" i_stop="66699" i_length="3924"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="66698" e_stop="66566" e_length="133"/>
          </exon>
          <intron i_serial="4" don_prob="0.998" acc_prob="0.990">
            <gDNA_intron_boundary i_start="66565" i_stop="66313" i_length="253"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="66312" e_stop="66228" e_length="85"/>
          </exon>
          <intron i_serial="5" don_prob="0.867" acc_prob="0.998">
            <gDNA_intron_boundary i_start="66227" i_stop="65174" i_length="1054"/>
          </intron>
          <exon e_serial="6" e_score="0.945">
            <gDNA_exon_boundary e_start="65173" e_stop="64247" e_length="927"/>
          </exon>
          <intron i_serial="6" don_prob="0.000" acc_prob="0.962">
            <gDNA_intron_boundary i_start="64246" i_stop="64177" i_length="70"/>
          </intron>
          <exon e_serial="7" e_score="0.636">
            <gDNA_exon_boundary e_start="64176" e_stop="64166" e_length="11"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="72028" stop="71949"/>
              <exon start="71733" stop="71728"/>
              <exon start="71674" stop="71127"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E547369" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="72027" stop="71949"/>
              <exon start="71733" stop="71728"/>
              <exon start="71674" stop="71441"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E362135" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71316" stop="70642"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E379230" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71316" stop="70864"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E200371" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70892" stop="70623"/>
              <exon start="66698" stop="66566"/>
              <exon start="66312" stop="66228"/>
              <exon start="65173" stop="65028"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E366969" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70785" stop="70623"/>
              <exon start="66698" stop="66566"/>
              <exon start="66312" stop="66249"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E293754" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70686" stop="70623"/>
              <exon start="66698" stop="66566"/>
              <exon start="66312" stop="66228"/>
              <exon start="65173" stop="65050"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E311853" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="65042" stop="64247"/>
              <exon start="64176" stop="64166"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E549524" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GCTGCTTCCTTCTGCTTCTGCTTCCCTTTTCACATTTTTCCCTTCTCTGCAGATCTAATTTCAAAGCTAATCGAAACCGT : ATCTTT : AGGGAATTGATCTGGGATAAGCTTGTTTGGTGTTTGCGGAATCTACAGGGTCTCAGCAAGGGGTTTCATGTTCTGGTATAGCTAACTTTTGTTAAAGTAATTCGGTTTCGGTGGAATTTGAATACCCCATGATTTTAAATGCAGAGGAAAAGCAACTTGGATTGTGATTTTATGGTTTTCCTGCTATAATGTTCTTGCTTTGACCGGGGAAAAGTATCATTACTTGTTGATTTTTGGTTTTCTGTTGGTACGGTTCTTGTTGGAGTATATATATATGTGTGGGATGTTGGGTTTGTTCCTGTGCTGTTAACATTTGGAATTTGAAGGGTTGGGGTTTTTTCTGTTTGGATTTGGAGGGTTTGTATGGATAAGGATAAGTCTTCTTCAAGCCATATAGGAGGTTCGTTGCCTCCATCAGGGAGATACTCATTATTTTCACCTCCCGGTAGTAGCTCCAATGTAAAGTCAGAACAACCTGGATTAGCAAATTTACCTCCCTTAGGACCTGGAAATGCTTCAGAATCAGGTCATTTTGGTCATGGTTTGTCGGCAGATTCAAGCCTGTTTAGTCTTGATATAAGCCGAATGTCTGATAACCCACCAAGAAAATTTGGTCATAGGCGTGCCCACTCAGAAATTCTTACTCTTCCTGATGATATTAGCTTTGATAGTGATCTTGGCGTTGTTGGACTAGATGGACCGTCTCTGTCAGATGAGACTGAGGAGGACATCTTGTCAATGTACCTTGACATGGATAAGTTCAATTCTTCAACTCTGTCTTCTGAATTCCAAGTGGGTGAGTCTTCTTCAGCTGCTCCAGGTTCATCACAAACAACAGCAATGGCTTCAGGAACAAATAAATTTGCTCCTACTGTTAGTGAGAAGCCAAGAGTTAGACATCAGCATAGCCAGTCCATGGATGGTTCAACTACAATCAAGCCAGAGATGCTCATGTCAGGAGTGGAAGAGCCTTCTTCAGCTGAAACTAAGAAAGCCACGTCAGCTGCAAAGCTTGCTGAACTTGCTCTTATTGATCCTAAACGTGCCAAGCG : GATTTGGGCCAACAGGCAGTCAGCTGCAAGATCAAAGGAAAGGAAAATGAGATATATAGCAGAGCTTGAGAGAAAAGTTCAGACTCTGCAAACGGAAGCAACTACTTTATCTACTCAGTTGACCCTATTGCAG : AGAGATACAAACGGCCTGAATGCTGAAAACAGTGAACTTAAACTGCGTTTACAAACAATGGAACAACAGGTTCACTTGCAAGATG : CGTTGAATGATGCTTTAAAGGAGGAGATACAGCATCTGAAAGTGCTAACTGGGCAAGGCATAGCAAATGGTGGACCTATGATGAACTTCCCAGCAACCTTTGGAGGCAATCAGCAGTTCTACTCTAACAACCAGGCAATGCATACATTGTTGGCTGCACAACAACTTCAACAGCTCCAGCTACATTCTCATAAGCAACAACACCAGTTTCAGCAACATCAGCTACACCAGTTTCAGCAGCAACAGTTGCAGCACCAACAACAGCAACAGCAACCTCTTATGCAGCAGCAGCAGCAGCAGGATCAACTTTCACAAGCCGGAGATGTGATGTCAAGAGGTTCTCTGTCATCTCCTCAAAATGAAAACGCTTCTGATGTTAGTTCTGTAGCAAAGGATTGAACAGCTGATGGCCAGAGAGACAGGAGATGGTGTATGTTTTAAAAATCATCATGTGTTTTCCCATCTAGCAGCTCATTTTTGTGTTTCAAAATCATCACGTGTTGAAACAACATCTAGCTCAGGTTCTCTTGCTTTCAGTTAGCTCCTTCATCTGCATTTTAGTACTTTTGTAGGGTCATTTGACTTTTAGTTGAAATTGTTCAAATCCCATTCTATGCATATGTCATTTTGTCAACTATCAACATGATTTTCTTCATGTTACCAATATTGTTGGTGGTAGTTTTTTTGGACATCAATCACTTATATCTCTCTCACACTGTTCAGTGTTCACATTTTTCGAATAATGTTTTGTGGCTTGCGCGATCGTGGAGGGTAAAATTCTCATGGTGCTCCTCAATAGGTAGGATTTACCAGAGGCGGATCCAGAGCGTAAACTATGGGGTTCAAGGAACTCCATAACTTTTATCTAGGCCTTTAAATGTATTCGTTAAATATTTGATCGTGAACTTGGTTAAATATTGTAATCCCC : AGAAAAAGTTA</gDNA_template>
            <first_frame> A  A  S  F  C  F  C  F  P  F  H  I  F  P  F  S  A  D  L  I  S  K  L  I  E  T  V :   S  L :   G  N  *  S  G  I  S  L  F  G  V  C  G  I  Y  R  V  S  A  R  G  F  M  F  W  Y  S  *  L  L  L  K  *  F  G  F  G  G  I  *  I  P  H  D  F  K  C  R  G  K  A  T  W  I  V  I  L  W  F  S  C  Y  N  V  L  A  L  T  G  E  K  Y  H  Y  L  L  I  F  G  F  L  L  V  R  F  L  L  E  Y  I  Y  M  C  G  M  L  G  L  F  L  C  C  *  H  L  E  F  E  G  L  G  F  F  L  F  G  F  G  G  F  V  W  I  R  I  S  L  L  Q  A  I  *  E  V  R  C  L  H  Q  G  D  T  H  Y  F  H  L  P  V  V  A  P  M  *  S  Q  N  N  L  D  *  Q  I  Y  L  P  *  D  L  E  M  L  Q  N  Q  V  I  L  V  M  V  C  R  Q  I  Q  A  C  L  V  L  I  *  A  E  C  L  I  T  H  Q  E  N  L  V  I  G  V  P  T  Q  K  F  L  L  F  L  M  I  L  A  L  I  V  I  L  A  L  L  D  *  M  D  R  L  C  Q  M  R  L  R  R  T  S  C  Q  C  T  L  T  W  I  S  S  I  L  Q  L  C  L  L  N  S  K  W  V  S  L  L  Q  L  L  Q  V  H  H  K  Q  Q  Q  W  L  Q  E  Q  I  N  L  L  L  L  L  V  R  S  Q  E  L  D  I  S  I  A  S  P  W  M  V  Q  L  Q  S  S  Q  R  C  S  C  Q  E  W  K  S  L  L  Q  L  K  L  R  K  P  R  Q  L  Q  S  L  L  N  L  L  L  L  I  L  N  V  P  S   : G  F  G  P  T  G  S  Q  L  Q  D  Q  R  K  G  K  *  D  I  *  Q  S  L  R  E  K  F  R  L  C  K  R  K  Q  L  L  Y  L  L  S  *  P  Y  C  R :   E  I  Q  T  A  *  M  L  K  T  V  N  L  N  C  V  Y  K  Q  W  N  N  R  F  T  C  K  M  :  R  *  M  M  L  *  R  R  R  Y  S  I  *  K  C  *  L  G  K  A  *  Q  M  V  D  L  *  *  T  S  Q  Q  P  L  E  A  I  S  S  S  T  L  T  T  R  Q  C  I  H  C  W  L  H  N  N  F  N  S  S  S  Y  I  L  I  S  N  N  T  S  F  S  N  I  S  Y  T  S  F  S  S  N  S  C  S  T  N  N  S  N  S  N  L  L  C  S  S  S  S  S  R  I  N  F  H  K  P  E  M  *  C  Q  E  V  L  C  H  L  L  K  M  K  T  L  L  M  L  V  L  *  Q  R  I  E  Q  L  M  A  R  E  T  G  D  G  V  C  F  K  N  H  H  V  F  S  H  L  A  A  H  F  C  V  S  K  S  S  R  V  E  T  T  S  S  S  G  S  L  A  F  S  *  L  L  H  L  H  F  S  T  F  V  G  S  F  D  F  *  L  K  L  F  K  S  H  S  M  H  M  S  F  C  Q  L  S  T  *  F  S  S  C  Y  Q  Y  C  W  W  *  F  F  W  T  S  I  T  Y  I  S  L  T  L  F  S  V  H  I  F  R  I  M  F  C  G  L  R  D  R  G  G  *  N  S  H  G  A  P  Q  *  V  G  F  T  R  G  G  S  R  A  *  T  M  G  F  K  E  L  H  N  F  Y  L  G  L  *  M  Y  S  L  N  I  *  S  *  T  W  L  N  I  V  I  P  :  R  K  S   </first_frame>
            <second_frame>  L  L  P  S  A  S  A  S  L  F  T  F  F  P  S  L  Q  I  *  F  Q  S  *  S  K  P   : Y  L   : *  G  I  D  L  G  *  A  C  L  V  F  A  E  S  T  G  S  Q  Q  G  V  S  C  S  G  I  A  N  F  C  *  S  N  S  V  S  V  E  F  E  Y  P  M  I  L  N  A  E  E  K  Q  L  G  L  *  F  Y  G  F  P  A  I  M  F  L  L  *  P  G  K  S  I  I  T  C  *  F  L  V  F  C  W  Y  G  S  C  W  S  I  Y  I  C  V  G  C  W  V  C  S  C  A  V  N  I  W  N  L  K  G  W  G  F  F  C  L  D  L  E  G  L  Y  G  *  G  *  V  F  F  K  P  Y  R  R  F  V  A  S  I  R  E  I  L  I  I  F  T  S  R  *  *  L  Q  C  K  V  R  T  T  W  I  S  K  F  T  S  L  R  T  W  K  C  F  R  I  R  S  F  W  S  W  F  V  G  R  F  K  P  V  *  S  *  Y  K  P  N  V  *  *  P  T  K  K  I  W  S  *  A  C  P  L  R  N  S  Y  S  S  *  *  Y  *  L  *  *  *  S  W  R  C  W  T  R  W  T  V  S  V  R  *  D  *  G  G  H  L  V  N  V  P  *  H  G  *  V  Q  F  F  N  S  V  F  *  I  P  S  G  *  V  F  F  S  C  S  R  F  I  T  N  N  S  N  G  F  R  N  K  *  I  C  S  Y  C  *  *  E  A  K  S  *  T  S  A  *  P  V  H  G  W  F  N  Y  N  Q  A  R  D  A  H  V  R  S  G  R  A  F  F  S  *  N  *  E  S  H  V  S  C  K  A  C  *  T  C  S  Y  *  S  *  T  C  Q  A  :  D  L  G  Q  Q  A  V  S  C  K  I  K  G  K  E  N  E  I  Y  S  R  A  *  E  K  S  S  D  S  A  N  G  S  N  Y  F  I  Y  S  V  D  P  I  A   : E  R  Y  K  R  P  E  C  *  K  Q  *  T  *  T  A  F  T  N  N  G  T  T  G  S  L  A  R  C :   V  E  *  C  F  K  G  G  D  T  A  S  E  S  A  N  W  A  R  H  S  K  W  W  T  Y  D  E  L  P  S  N  L  W  R  Q  S  A  V  L  L  *  Q  P  G  N  A  Y  I  V  G  C  T  T  T  S  T  A  P  A  T  F  S  *  A  T  T  P  V  S  A  T  S  A  T  P  V  S  A  A  T  V  A  A  P  T  T  A  T  A  T  S  Y  A  A  A  A  A  A  G  S  T  F  T  S  R  R  C  D  V  K  R  F  S  V  I  S  S  K  *  K  R  F  *  C  *  F  C  S  K  G  L  N  S  *  W  P  E  R  Q  E  M  V  Y  V  L  K  I  I  M  C  F  P  I  *  Q  L  I  F  V  F  Q  N  H  H  V  L  K  Q  H  L  A  Q  V  L  L  L  S  V  S  S  F  I  C  I  L  V  L  L  *  G  H  L  T  F  S  *  N  C  S  N  P  I  L  C  I  C  H  F  V  N  Y  Q  H  D  F  L  H  V  T  N  I  V  G  G  S  F  F  G  H  Q  S  L  I  S  L  S  H  C  S  V  F  T  F  F  E  *  C  F  V  A  C  A  I  V  E  G  K  I  L  M  V  L  L  N  R  *  D  L  P  E  A  D  P  E  R  K  L  W  G  S  R  N  S  I  T  F  I  *  A  F  K  C  I  R  *  I  F  D  R  E  L  G  *  I  L  *  S  P :   E  K  V  </second_frame>
            <third_frame>   C  F  L  L  L  L  L  P  F  S  H  F  S  L  L  C  R  S  N  F  K  A  N  R  N  R  :  I  F  :  R  E  L  I  W  D  K  L  V  W  C  L  R  N  L  Q  G  L  S  K  G  F  H  V  L  V  *  L  T  F  V  K  V  I  R  F  R  W  N  L  N  T  P  *  F  *  M  Q  R  K  S  N  L  D  C  D  F  M  V  F  L  L  *  C  S  C  F  D  R  G  K  V  S  L  L  V  D  F  W  F  S  V  G  T  V  L  V  G  V  Y  I  Y  V  W  D  V  G  F  V  P  V  L  L  T  F  G  I  *  R  V  G  V  F  S  V  W  I  W  R  V  C  M  D  K  D  K  S  S  S  S  H  I  G  G  S  L  P  P  S  G  R  Y  S  L  F  S  P  P  G  S  S  S  N  V  K  S  E  Q  P  G  L  A  N  L  P  P  L  G  P  G  N  A  S  E  S  G  H  F  G  H  G  L  S  A  D  S  S  L  F  S  L  D  I  S  R  M  S  D  N  P  P  R  K  F  G  H  R  R  A  H  S  E  I  L  T  L  P  D  D  I  S  F  D  S  D  L  G  V  V  G  L  D  G  P  S  L  S  D  E  T  E  E  D  I  L  S  M  Y  L  D  M  D  K  F  N  S  S  T  L  S  S  E  F  Q  V  G  E  S  S  S  A  A  P  G  S  S  Q  T  T  A  M  A  S  G  T  N  K  F  A  P  T  V  S  E  K  P  R  V  R  H  Q  H  S  Q  S  M  D  G  S  T  T  I  K  P  E  M  L  M  S  G  V  E  E  P  S  S  A  E  T  K  K  A  T  S  A  A  K  L  A  E  L  A  L  I  D  P  K  R  A  K  R :   I  W  A  N  R  Q  S  A  A  R  S  K  E  R  K  M  R  Y  I  A  E  L  E  R  K  V  Q  T  L  Q  T  E  A  T  T  L  S  T  Q  L  T  L  L  Q  :  R  D  T  N  G  L  N  A  E  N  S  E  L  K  L  R  L  Q  T  M  E  Q  Q  V  H  L  Q  D   : A  L  N  D  A  L  K  E  E  I  Q  H  L  K  V  L  T  G  Q  G  I  A  N  G  G  P  M  M  N  F  P  A  T  F  G  G  N  Q  Q  F  Y  S  N  N  Q  A  M  H  T  L  L  A  A  Q  Q  L  Q  Q  L  Q  L  H  S  H  K  Q  Q  H  Q  F  Q  Q  H  Q  L  H  Q  F  Q  Q  Q  Q  L  Q  H  Q  Q  Q  Q  Q  Q  P  L  M  Q  Q  Q  Q  Q  Q  D  Q  L  S  Q  A  G  D  V  M  S  R  G  S  L  S  S  P  Q  N  E  N  A  S  D  V  S  S  V  A  K  D  *  T  A  D  G  Q  R  D  R  R  W  C  M  F  *  K  S  S  C  V  F  P  S  S  S  S  F  L  C  F  K  I  I  T  C  *  N  N  I  *  L  R  F  S  C  F  Q  L  A  P  S  S  A  F  *  Y  F  C  R  V  I  *  L  L  V  E  I  V  Q  I  P  F  Y  A  Y  V  I  L  S  T  I  N  M  I  F  F  M  L  P  I  L  L  V  V  V  F  L  D  I  N  H  L  Y  L  S  H  T  V  Q  C  S  H  F  S  N  N  V  L  W  L  A  R  S  W  R  V  K  F  S  W  C  S  S  I  G  R  I  Y  Q  R  R  I  Q  S  V  N  Y  G  V  Q  G  T  P  *  L  L  S  R  P  L  N  V  F  V  K  Y  L  I  V  N  L  V  K  Y  C  N  P   : Q  K  K  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0167M06.1" strand="-"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="71350" stop="70623"/>
                    <exon start="66698" stop="66566"/>
                    <exon start="66312" stop="66228"/>
                    <exon start="65173" stop="64776"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1341</number_coding_nucleotides>
                  <number_encoded_amino_acids>447</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RVGVFSVWIWRVCMDKDKSSSSHIGGSLPPSGRYSLFSPPGSSSNVKSEQPGLANLPPLGPGNASESGHFGHGLSADSSLFSLDISRMSDNPPRKFGHRRAHSEILTLPDDISFDSDLGVVGLDGPSLSDETEEDILSMYLDMDKFNSSTLSSEFQVGESSSAAPGSSQTTAMASGTNKFAPTVSEKPRVRHQHSQSMDGSTTIKPEMLMSGVEEPSSAETKKATSAAKLAELALIDPKRAKRIWANRQSAARSKERKMRYIAELERKVQTLQTEATTLSTQLTLLQRDTNGLNAENSELKLRLQTMEQQVHLQDALNDALKEEIQHLKVLTGQGIANGGPMMNFPATFGGNQQFYSNNQAMHTLLAAQQLQQLQLHSHKQQHQFQQHQLHQFQQQQLQHQQQQQQPLMQQQQQQDQLSQAGDVMSRGSLSSPQNENASDVSSVAKD*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0167M06.1" strand="-"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="64592" stop="64317"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>273</number_coding_nucleotides>
                  <number_encoded_amino_acids>91</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LLVEIVQIPFYAYVILSTINMIFFMLPILLVVVFLDINHLYLSHTVQCSHFSNNVLWLARSWRVKFSWCSSIGRIYQRRIQSVNYGVQGTP*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="72050" e_stop="71949"/>
            <exon e_start="71674" e_stop="70623"/>
            <exon e_start="66698" e_stop="66566"/>
            <exon e_start="66312" e_stop="66228"/>
            <exon e_start="65173" e_stop="64247"/>
            <exon e_start="64176" e_stop="64166"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.999" e_score="0.980"/>
          <exon-intron don_prob="1.000" acc_prob="0.996" e_score="0.992"/>
          <exon-intron don_prob="0.998" acc_prob="0.990" e_score="1.000"/>
          <exon-intron don_prob="0.867" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.962" e_score="0.945"/>
          <exon-only e_score="0.636"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.980">
            <gDNA_exon_boundary e_start="72050" e_stop="71949" e_length="102"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.999">
            <gDNA_intron_boundary i_start="71948" i_stop="71675" i_length="274"/>
          </intron>
          <exon e_serial="2" e_score="0.992">
            <gDNA_exon_boundary e_start="71674" e_stop="70623" e_length="1052"/>
          </exon>
          <intron i_serial="2" don_prob="1.000" acc_prob="0.996">
            <gDNA_intron_boundary i_start="70622" i_stop="66699" i_length="3924"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="66698" e_stop="66566" e_length="133"/>
          </exon>
          <intron i_serial="3" don_prob="0.998" acc_prob="0.990">
            <gDNA_intron_boundary i_start="66565" i_stop="66313" i_length="253"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="66312" e_stop="66228" e_length="85"/>
          </exon>
          <intron i_serial="4" don_prob="0.867" acc_prob="0.998">
            <gDNA_intron_boundary i_start="66227" i_stop="65174" i_length="1054"/>
          </intron>
          <exon e_serial="5" e_score="0.945">
            <gDNA_exon_boundary e_start="65173" e_stop="64247" e_length="927"/>
          </exon>
          <intron i_serial="5" don_prob="0.000" acc_prob="0.962">
            <gDNA_intron_boundary i_start="64246" i_stop="64177" i_length="70"/>
          </intron>
          <exon e_serial="6" e_score="0.636">
            <gDNA_exon_boundary e_start="64176" e_stop="64166" e_length="11"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="72050" stop="71949"/>
              <exon start="71674" stop="70951"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E709570" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71316" stop="70642"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E379230" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71316" stop="70864"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E200371" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70892" stop="70623"/>
              <exon start="66698" stop="66566"/>
              <exon start="66312" stop="66228"/>
              <exon start="65173" stop="65028"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E366969" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70785" stop="70623"/>
              <exon start="66698" stop="66566"/>
              <exon start="66312" stop="66249"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E293754" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70686" stop="70623"/>
              <exon start="66698" stop="66566"/>
              <exon start="66312" stop="66228"/>
              <exon start="65173" stop="65050"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E311853" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="65042" stop="64247"/>
              <exon start="64176" stop="64166"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E549524" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTTCTCTCTCGCATGTGATAAAGCTGCTTCCTTCTGCTTCTGCTTCCCTTTTCACATTTTTCCCTTCTCTGCAGATCTAATTTCAAAGCTAATCGAAACCGT : AGGGAATTGATCTGGGATAAGCTTGTTTGGTGTTTGCGGAATCTACAGGGTCTCAGCAAGGGGTTTCATGTTCTGGTATAGCTAACTTTTGTTAAAGTAATTCGGTTTCGGTGGAATTTGAATACCCCATGATTTTAAATGCAGAGGAAAAGCAACTTGGATTGTGATTTTATGGTTTTCCTGCTATAATGTTCTTGCTTTGACCGGGGAAAAGTATCATTACTTGTTGATTTTTGGTTTTCTGTTGGTACGGTTCTTGTTGGAGTATATATATATGTGTGGGATGTTGGGTTTGTTCCTGTGCTGTTAACATTTGGAATTTGAAGGGTTGGGGTTTTTTCTGTTTGGATTTGGAGGGTTTGTATGGATAAGGATAAGTCTTCTTCAAGCCATATAGGAGGTTCGTTGCCTCCATCAGGGAGATACTCATTATTTTCACCTCCCGGTAGTAGCTCCAATGTAAAGTCAGAACAACCTGGATTAGCAAATTTACCTCCCTTAGGACCTGGAAATGCTTCAGAATCAGGTCATTTTGGTCATGGTTTGTCGGCAGATTCAAGCCTGTTTAGTCTTGATATAAGCCGAATGTCTGATAACCCACCAAGAAAATTTGGTCATAGGCGTGCCCACTCAGAAATTCTTACTCTTCCTGATGATATTAGCTTTGATAGTGATCTTGGCGTTGTTGGACTAGATGGACCGTCTCTGTCAGATGAGACTGAGGAGGACATCTTGTCAATGTACCTTGACATGGATAAGTTCAATTCTTCAACTCTGTCTTCTGAATTCCAAGTGGGTGAGTCTTCTTCAGCTGCTCCAGGTTCATCACAAACAACAGCAATGGCTTCAGGAACAAATAAATTTGCTCCTACTGTTAGTGAGAAGCCAAGAGTTAGACATCAGCATAGCCAGTCCATGGATGGTTCAACTACAATCAAGCCAGAGATGCTCATGTCAGGAGTGGAAGAGCCTTCTTCAGCTGAAACTAAGAAAGCCACGTCAGCTGCAAAGCTTGCTGAACTTGCTCTTATTGATCCTAAACGTGCCAAGCG : GATTTGGGCCAACAGGCAGTCAGCTGCAAGATCAAAGGAAAGGAAAATGAGATATATAGCAGAGCTTGAGAGAAAAGTTCAGACTCTGCAAACGGAAGCAACTACTTTATCTACTCAGTTGACCCTATTGCAG : AGAGATACAAACGGCCTGAATGCTGAAAACAGTGAACTTAAACTGCGTTTACAAACAATGGAACAACAGGTTCACTTGCAAGATG : CGTTGAATGATGCTTTAAAGGAGGAGATACAGCATCTGAAAGTGCTAACTGGGCAAGGCATAGCAAATGGTGGACCTATGATGAACTTCCCAGCAACCTTTGGAGGCAATCAGCAGTTCTACTCTAACAACCAGGCAATGCATACATTGTTGGCTGCACAACAACTTCAACAGCTCCAGCTACATTCTCATAAGCAACAACACCAGTTTCAGCAACATCAGCTACACCAGTTTCAGCAGCAACAGTTGCAGCACCAACAACAGCAACAGCAACCTCTTATGCAGCAGCAGCAGCAGCAGGATCAACTTTCACAAGCCGGAGATGTGATGTCAAGAGGTTCTCTGTCATCTCCTCAAAATGAAAACGCTTCTGATGTTAGTTCTGTAGCAAAGGATTGAACAGCTGATGGCCAGAGAGACAGGAGATGGTGTATGTTTTAAAAATCATCATGTGTTTTCCCATCTAGCAGCTCATTTTTGTGTTTCAAAATCATCACGTGTTGAAACAACATCTAGCTCAGGTTCTCTTGCTTTCAGTTAGCTCCTTCATCTGCATTTTAGTACTTTTGTAGGGTCATTTGACTTTTAGTTGAAATTGTTCAAATCCCATTCTATGCATATGTCATTTTGTCAACTATCAACATGATTTTCTTCATGTTACCAATATTGTTGGTGGTAGTTTTTTTGGACATCAATCACTTATATCTCTCTCACACTGTTCAGTGTTCACATTTTTCGAATAATGTTTTGTGGCTTGCGCGATCGTGGAGGGTAAAATTCTCATGGTGCTCCTCAATAGGTAGGATTTACCAGAGGCGGATCCAGAGCGTAAACTATGGGGTTCAAGGAACTCCATAACTTTTATCTAGGCCTTTAAATGTATTCGTTAAATATTTGATCGTGAACTTGGTTAAATATTGTAATCCCC : AGAAAAAGTTA</gDNA_template>
            <first_frame> F  L  S  R  M  *  *  S  C  F  L  L  L  L  L  P  F  S  H  F  S  L  L  C  R  S  N  F  K  A  N  R  N  R  :  R  E  L  I  W  D  K  L  V  W  C  L  R  N  L  Q  G  L  S  K  G  F  H  V  L  V  *  L  T  F  V  K  V  I  R  F  R  W  N  L  N  T  P  *  F  *  M  Q  R  K  S  N  L  D  C  D  F  M  V  F  L  L  *  C  S  C  F  D  R  G  K  V  S  L  L  V  D  F  W  F  S  V  G  T  V  L  V  G  V  Y  I  Y  V  W  D  V  G  F  V  P  V  L  L  T  F  G  I  *  R  V  G  V  F  S  V  W  I  W  R  V  C  M  D  K  D  K  S  S  S  S  H  I  G  G  S  L  P  P  S  G  R  Y  S  L  F  S  P  P  G  S  S  S  N  V  K  S  E  Q  P  G  L  A  N  L  P  P  L  G  P  G  N  A  S  E  S  G  H  F  G  H  G  L  S  A  D  S  S  L  F  S  L  D  I  S  R  M  S  D  N  P  P  R  K  F  G  H  R  R  A  H  S  E  I  L  T  L  P  D  D  I  S  F  D  S  D  L  G  V  V  G  L  D  G  P  S  L  S  D  E  T  E  E  D  I  L  S  M  Y  L  D  M  D  K  F  N  S  S  T  L  S  S  E  F  Q  V  G  E  S  S  S  A  A  P  G  S  S  Q  T  T  A  M  A  S  G  T  N  K  F  A  P  T  V  S  E  K  P  R  V  R  H  Q  H  S  Q  S  M  D  G  S  T  T  I  K  P  E  M  L  M  S  G  V  E  E  P  S  S  A  E  T  K  K  A  T  S  A  A  K  L  A  E  L  A  L  I  D  P  K  R  A  K  R :   I  W  A  N  R  Q  S  A  A  R  S  K  E  R  K  M  R  Y  I  A  E  L  E  R  K  V  Q  T  L  Q  T  E  A  T  T  L  S  T  Q  L  T  L  L  Q  :  R  D  T  N  G  L  N  A  E  N  S  E  L  K  L  R  L  Q  T  M  E  Q  Q  V  H  L  Q  D   : A  L  N  D  A  L  K  E  E  I  Q  H  L  K  V  L  T  G  Q  G  I  A  N  G  G  P  M  M  N  F  P  A  T  F  G  G  N  Q  Q  F  Y  S  N  N  Q  A  M  H  T  L  L  A  A  Q  Q  L  Q  Q  L  Q  L  H  S  H  K  Q  Q  H  Q  F  Q  Q  H  Q  L  H  Q  F  Q  Q  Q  Q  L  Q  H  Q  Q  Q  Q  Q  Q  P  L  M  Q  Q  Q  Q  Q  Q  D  Q  L  S  Q  A  G  D  V  M  S  R  G  S  L  S  S  P  Q  N  E  N  A  S  D  V  S  S  V  A  K  D  *  T  A  D  G  Q  R  D  R  R  W  C  M  F  *  K  S  S  C  V  F  P  S  S  S  S  F  L  C  F  K  I  I  T  C  *  N  N  I  *  L  R  F  S  C  F  Q  L  A  P  S  S  A  F  *  Y  F  C  R  V  I  *  L  L  V  E  I  V  Q  I  P  F  Y  A  Y  V  I  L  S  T  I  N  M  I  F  F  M  L  P  I  L  L  V  V  V  F  L  D  I  N  H  L  Y  L  S  H  T  V  Q  C  S  H  F  S  N  N  V  L  W  L  A  R  S  W  R  V  K  F  S  W  C  S  S  I  G  R  I  Y  Q  R  R  I  Q  S  V  N  Y  G  V  Q  G  T  P  *  L  L  S  R  P  L  N  V  F  V  K  Y  L  I  V  N  L  V  K  Y  C  N  P   : Q  K  K  L </first_frame>
            <second_frame>  F  S  L  A  C  D  K  A  A  S  F  C  F  C  F  P  F  H  I  F  P  F  S  A  D  L  I  S  K  L  I  E  T  V :   G  N  *  S  G  I  S  L  F  G  V  C  G  I  Y  R  V  S  A  R  G  F  M  F  W  Y  S  *  L  L  L  K  *  F  G  F  G  G  I  *  I  P  H  D  F  K  C  R  G  K  A  T  W  I  V  I  L  W  F  S  C  Y  N  V  L  A  L  T  G  E  K  Y  H  Y  L  L  I  F  G  F  L  L  V  R  F  L  L  E  Y  I  Y  M  C  G  M  L  G  L  F  L  C  C  *  H  L  E  F  E  G  L  G  F  F  L  F  G  F  G  G  F  V  W  I  R  I  S  L  L  Q  A  I  *  E  V  R  C  L  H  Q  G  D  T  H  Y  F  H  L  P  V  V  A  P  M  *  S  Q  N  N  L  D  *  Q  I  Y  L  P  *  D  L  E  M  L  Q  N  Q  V  I  L  V  M  V  C  R  Q  I  Q  A  C  L  V  L  I  *  A  E  C  L  I  T  H  Q  E  N  L  V  I  G  V  P  T  Q  K  F  L  L  F  L  M  I  L  A  L  I  V  I  L  A  L  L  D  *  M  D  R  L  C  Q  M  R  L  R  R  T  S  C  Q  C  T  L  T  W  I  S  S  I  L  Q  L  C  L  L  N  S  K  W  V  S  L  L  Q  L  L  Q  V  H  H  K  Q  Q  Q  W  L  Q  E  Q  I  N  L  L  L  L  L  V  R  S  Q  E  L  D  I  S  I  A  S  P  W  M  V  Q  L  Q  S  S  Q  R  C  S  C  Q  E  W  K  S  L  L  Q  L  K  L  R  K  P  R  Q  L  Q  S  L  L  N  L  L  L  L  I  L  N  V  P  S   : G  F  G  P  T  G  S  Q  L  Q  D  Q  R  K  G  K  *  D  I  *  Q  S  L  R  E  K  F  R  L  C  K  R  K  Q  L  L  Y  L  L  S  *  P  Y  C  R :   E  I  Q  T  A  *  M  L  K  T  V  N  L  N  C  V  Y  K  Q  W  N  N  R  F  T  C  K  M  :  R  *  M  M  L  *  R  R  R  Y  S  I  *  K  C  *  L  G  K  A  *  Q  M  V  D  L  *  *  T  S  Q  Q  P  L  E  A  I  S  S  S  T  L  T  T  R  Q  C  I  H  C  W  L  H  N  N  F  N  S  S  S  Y  I  L  I  S  N  N  T  S  F  S  N  I  S  Y  T  S  F  S  S  N  S  C  S  T  N  N  S  N  S  N  L  L  C  S  S  S  S  S  R  I  N  F  H  K  P  E  M  *  C  Q  E  V  L  C  H  L  L  K  M  K  T  L  L  M  L  V  L  *  Q  R  I  E  Q  L  M  A  R  E  T  G  D  G  V  C  F  K  N  H  H  V  F  S  H  L  A  A  H  F  C  V  S  K  S  S  R  V  E  T  T  S  S  S  G  S  L  A  F  S  *  L  L  H  L  H  F  S  T  F  V  G  S  F  D  F  *  L  K  L  F  K  S  H  S  M  H  M  S  F  C  Q  L  S  T  *  F  S  S  C  Y  Q  Y  C  W  W  *  F  F  W  T  S  I  T  Y  I  S  L  T  L  F  S  V  H  I  F  R  I  M  F  C  G  L  R  D  R  G  G  *  N  S  H  G  A  P  Q  *  V  G  F  T  R  G  G  S  R  A  *  T  M  G  F  K  E  L  H  N  F  Y  L  G  L  *  M  Y  S  L  N  I  *  S  *  T  W  L  N  I  V  I  P  :  R  K  S   </second_frame>
            <third_frame>   S  L  S  H  V  I  K  L  L  P  S  A  S  A  S  L  F  T  F  F  P  S  L  Q  I  *  F  Q  S  *  S  K  P   : *  G  I  D  L  G  *  A  C  L  V  F  A  E  S  T  G  S  Q  Q  G  V  S  C  S  G  I  A  N  F  C  *  S  N  S  V  S  V  E  F  E  Y  P  M  I  L  N  A  E  E  K  Q  L  G  L  *  F  Y  G  F  P  A  I  M  F  L  L  *  P  G  K  S  I  I  T  C  *  F  L  V  F  C  W  Y  G  S  C  W  S  I  Y  I  C  V  G  C  W  V  C  S  C  A  V  N  I  W  N  L  K  G  W  G  F  F  C  L  D  L  E  G  L  Y  G  *  G  *  V  F  F  K  P  Y  R  R  F  V  A  S  I  R  E  I  L  I  I  F  T  S  R  *  *  L  Q  C  K  V  R  T  T  W  I  S  K  F  T  S  L  R  T  W  K  C  F  R  I  R  S  F  W  S  W  F  V  G  R  F  K  P  V  *  S  *  Y  K  P  N  V  *  *  P  T  K  K  I  W  S  *  A  C  P  L  R  N  S  Y  S  S  *  *  Y  *  L  *  *  *  S  W  R  C  W  T  R  W  T  V  S  V  R  *  D  *  G  G  H  L  V  N  V  P  *  H  G  *  V  Q  F  F  N  S  V  F  *  I  P  S  G  *  V  F  F  S  C  S  R  F  I  T  N  N  S  N  G  F  R  N  K  *  I  C  S  Y  C  *  *  E  A  K  S  *  T  S  A  *  P  V  H  G  W  F  N  Y  N  Q  A  R  D  A  H  V  R  S  G  R  A  F  F  S  *  N  *  E  S  H  V  S  C  K  A  C  *  T  C  S  Y  *  S  *  T  C  Q  A  :  D  L  G  Q  Q  A  V  S  C  K  I  K  G  K  E  N  E  I  Y  S  R  A  *  E  K  S  S  D  S  A  N  G  S  N  Y  F  I  Y  S  V  D  P  I  A   : E  R  Y  K  R  P  E  C  *  K  Q  *  T  *  T  A  F  T  N  N  G  T  T  G  S  L  A  R  C :   V  E  *  C  F  K  G  G  D  T  A  S  E  S  A  N  W  A  R  H  S  K  W  W  T  Y  D  E  L  P  S  N  L  W  R  Q  S  A  V  L  L  *  Q  P  G  N  A  Y  I  V  G  C  T  T  T  S  T  A  P  A  T  F  S  *  A  T  T  P  V  S  A  T  S  A  T  P  V  S  A  A  T  V  A  A  P  T  T  A  T  A  T  S  Y  A  A  A  A  A  A  G  S  T  F  T  S  R  R  C  D  V  K  R  F  S  V  I  S  S  K  *  K  R  F  *  C  *  F  C  S  K  G  L  N  S  *  W  P  E  R  Q  E  M  V  Y  V  L  K  I  I  M  C  F  P  I  *  Q  L  I  F  V  F  Q  N  H  H  V  L  K  Q  H  L  A  Q  V  L  L  L  S  V  S  S  F  I  C  I  L  V  L  L  *  G  H  L  T  F  S  *  N  C  S  N  P  I  L  C  I  C  H  F  V  N  Y  Q  H  D  F  L  H  V  T  N  I  V  G  G  S  F  F  G  H  Q  S  L  I  S  L  S  H  C  S  V  F  T  F  F  E  *  C  F  V  A  C  A  I  V  E  G  K  I  L  M  V  L  L  N  R  *  D  L  P  E  A  D  P  E  R  K  L  W  G  S  R  N  S  I  T  F  I  *  A  F  K  C  I  R  *  I  F  D  R  E  L  G  *  I  L  *  S  P :   E  K  V  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0167M06.1" strand="-"/>
                <serials PGL_serial="5" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="71350" stop="70623"/>
                    <exon start="66698" stop="66566"/>
                    <exon start="66312" stop="66228"/>
                    <exon start="65173" stop="64776"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1341</number_coding_nucleotides>
                  <number_encoded_amino_acids>447</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RVGVFSVWIWRVCMDKDKSSSSHIGGSLPPSGRYSLFSPPGSSSNVKSEQPGLANLPPLGPGNASESGHFGHGLSADSSLFSLDISRMSDNPPRKFGHRRAHSEILTLPDDISFDSDLGVVGLDGPSLSDETEEDILSMYLDMDKFNSSTLSSEFQVGESSSAAPGSSQTTAMASGTNKFAPTVSEKPRVRHQHSQSMDGSTTIKPEMLMSGVEEPSSAETKKATSAAKLAELALIDPKRAKRIWANRQSAARSKERKMRYIAELERKVQTLQTEATTLSTQLTLLQRDTNGLNAENSELKLRLQTMEQQVHLQDALNDALKEEIQHLKVLTGQGIANGGPMMNFPATFGGNQQFYSNNQAMHTLLAAQQLQQLQLHSHKQQHQFQQHQLHQFQQQQLQHQQQQQQPLMQQQQQQDQLSQAGDVMSRGSLSSPQNENASDVSSVAKD*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0167M06.1" strand="-"/>
                <serials PGL_serial="5" AGS_serial="2" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="64592" stop="64317"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>273</number_coding_nucleotides>
                  <number_encoded_amino_acids>91</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LLVEIVQIPFYAYVILSTINMIFFMLPILLVVVFLDINHLYLSHTVQCSHFSNNVLWLARSWRVKFSWCSSIGRIYQRRIQSVNYGVQGTP*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="72139" e_stop="71949"/>
            <exon e_start="71674" e_stop="71600"/>
            <exon e_start="71530" e_stop="70623"/>
            <exon e_start="66698" e_stop="66566"/>
            <exon e_start="66312" e_stop="66228"/>
            <exon e_start="65173" e_stop="64464"/>
            <exon e_start="64176" e_stop="64164"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.999" e_score="0.991"/>
          <exon-intron don_prob="0.000" acc_prob="0.391" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.996" e_score="0.998"/>
          <exon-intron don_prob="0.998" acc_prob="0.990" e_score="1.000"/>
          <exon-intron don_prob="0.867" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.962" e_score="0.999"/>
          <exon-only e_score="0.692"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.991">
            <gDNA_exon_boundary e_start="72139" e_stop="71949" e_length="191"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.999">
            <gDNA_intron_boundary i_start="71948" i_stop="71675" i_length="274"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="71674" e_stop="71600" e_length="75"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.391">
            <gDNA_intron_boundary i_start="71599" i_stop="71531" i_length="69"/>
          </intron>
          <exon e_serial="3" e_score="0.998">
            <gDNA_exon_boundary e_start="71530" e_stop="70623" e_length="908"/>
          </exon>
          <intron i_serial="3" don_prob="1.000" acc_prob="0.996">
            <gDNA_intron_boundary i_start="70622" i_stop="66699" i_length="3924"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="66698" e_stop="66566" e_length="133"/>
          </exon>
          <intron i_serial="4" don_prob="0.998" acc_prob="0.990">
            <gDNA_intron_boundary i_start="66565" i_stop="66313" i_length="253"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="66312" e_stop="66228" e_length="85"/>
          </exon>
          <intron i_serial="5" don_prob="0.867" acc_prob="0.998">
            <gDNA_intron_boundary i_start="66227" i_stop="65174" i_length="1054"/>
          </intron>
          <exon e_serial="6" e_score="0.999">
            <gDNA_exon_boundary e_start="65173" e_stop="64464" e_length="710"/>
          </exon>
          <intron i_serial="6" don_prob="0.000" acc_prob="0.962">
            <gDNA_intron_boundary i_start="64463" i_stop="64177" i_length="287"/>
          </intron>
          <exon e_serial="7" e_score="0.692">
            <gDNA_exon_boundary e_start="64176" e_stop="64164" e_length="13"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="72139" stop="71949"/>
              <exon start="71674" stop="71600"/>
              <exon start="71530" stop="70623"/>
              <exon start="66698" stop="66566"/>
              <exon start="66312" stop="66228"/>
              <exon start="65173" stop="64464"/>
              <exon start="64176" stop="64164"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E746154" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71316" stop="70642"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E379230" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71316" stop="70864"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E200371" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70892" stop="70623"/>
              <exon start="66698" stop="66566"/>
              <exon start="66312" stop="66228"/>
              <exon start="65173" stop="65028"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E366969" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70785" stop="70623"/>
              <exon start="66698" stop="66566"/>
              <exon start="66312" stop="66249"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E293754" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70686" stop="70623"/>
              <exon start="66698" stop="66566"/>
              <exon start="66312" stop="66228"/>
              <exon start="65173" stop="65050"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E311853" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="3" gDNA_strand="-"/>
          <translation>
            <gDNA_template>NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAGCTTTTCCCTTTTCTCTCTCGCATGTGATAAAGCTGCTTCCTTCTGCTTCTGCTTCCCTTTTCACATTTTTCCCTTCTCTGCAGATCTAATTTCAAAGCTAATCGAAACCGT : AGGGAATTGATCTGGGATAAGCTTGTTTGGTGTTTGCGGAATCTACAGGGTCTCAGCAAGGGGTTTCATGTTCTG : AGGAAAAGCAACTTGGATTGTGATTTTATGGTTTTCCTGCTATAATGTTCTTGCTTTGACCGGGGAAAAGTATCATTACTTGTTGATTTTTGGTTTTCTGTTGGTACGGTTCTTGTTGGAGTATATATATATGTGTGGGATGTTGGGTTTGTTCCTGTGCTGTTAACATTTGGAATTTGAAGGGTTGGGGTTTTTTCTGTTTGGATTTGGAGGGTTTGTATGGATAAGGATAAGTCTTCTTCAAGCCATATAGGAGGTTCGTTGCCTCCATCAGGGAGATACTCATTATTTTCACCTCCCGGTAGTAGCTCCAATGTAAAGTCAGAACAACCTGGATTAGCAAATTTACCTCCCTTAGGACCTGGAAATGCTTCAGAATCAGGTCATTTTGGTCATGGTTTGTCGGCAGATTCAAGCCTGTTTAGTCTTGATATAAGCCGAATGTCTGATAACCCACCAAGAAAATTTGGTCATAGGCGTGCCCACTCAGAAATTCTTACTCTTCCTGATGATATTAGCTTTGATAGTGATCTTGGCGTTGTTGGACTAGATGGACCGTCTCTGTCAGATGAGACTGAGGAGGACATCTTGTCAATGTACCTTGACATGGATAAGTTCAATTCTTCAACTCTGTCTTCTGAATTCCAAGTGGGTGAGTCTTCTTCAGCTGCTCCAGGTTCATCACAAACAACAGCAATGGCTTCAGGAACAAATAAATTTGCTCCTACTGTTAGTGAGAAGCCAAGAGTTAGACATCAGCATAGCCAGTCCATGGATGGTTCAACTACAATCAAGCCAGAGATGCTCATGTCAGGAGTGGAAGAGCCTTCTTCAGCTGAAACTAAGAAAGCCACGTCAGCTGCAAAGCTTGCTGAACTTGCTCTTATTGATCCTAAACGTGCCAAGCG : GATTTGGGCCAACAGGCAGTCAGCTGCAAGATCAAAGGAAAGGAAAATGAGATATATAGCAGAGCTTGAGAGAAAAGTTCAGACTCTGCAAACGGAAGCAACTACTTTATCTACTCAGTTGACCCTATTGCAG : AGAGATACAAACGGCCTGAATGCTGAAAACAGTGAACTTAAACTGCGTTTACAAACAATGGAACAACAGGTTCACTTGCAAGATG : CGTTGAATGATGCTTTAAAGGAGGAGATACAGCATCTGAAAGTGCTAACTGGGCAAGGCATAGCAAATGGTGGACCTATGATGAACTTCCCAGCAACCTTTGGAGGCAATCAGCAGTTCTACTCTAACAACCAGGCAATGCATACATTGTTGGCTGCACAACAACTTCAACAGCTCCAGCTACATTCTCATAAGCAACAACACCAGTTTCAGCAACATCAGCTACACCAGTTTCAGCAGCAACAGTTGCAGCACCAACAACAGCAACAGCAACCTCTTATGCAGCAGCAGCAGCAGCAGGATCAACTTTCACAAGCCGGAGATGTGATGTCAAGAGGTTCTCTGTCATCTCCTCAAAATGAAAACGCTTCTGATGTTAGTTCTGTAGCAAAGGATTGAACAGCTGATGGCCAGAGAGACAGGAGATGGTGTATGTTTTAAAAATCATCATGTGTTTTCCCATCTAGCAGCTCATTTTTGTGTTTCAAAATCATCACGTGTTGAAACAACATCTAGCTCAGGTTCTCTTGCTTTCAGTTAGCTCCTTCATCTGCATTTTAGTACTTTTGTAGGGTCATTTGACTTTTAGTTGAAATTGTTCAAATCCCATTCTATGCATATGTCATTTTGTCAACTATCAACATGATTTTCTTCATGTTACCAATATTGTTGGTGGTAGTTTTTTTGGACATCAATCACTTATATCTCTCT : AGAAAAAGTTAAA</gDNA_template>
            <first_frame> F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  L  S  F  S  L  F  S  L  A  C  D  K  A  A  S  F  C  F  C  F  P  F  H  I  F  P  F  S  A  D  L  I  S  K  L  I  E  T  V :   G  N  *  S  G  I  S  L  F  G  V  C  G  I  Y  R  V  S  A  R  G  F  M  F  * :   G  K  A  T  W  I  V  I  L  W  F  S  C  Y  N  V  L  A  L  T  G  E  K  Y  H  Y  L  L  I  F  G  F  L  L  V  R  F  L  L  E  Y  I  Y  M  C  G  M  L  G  L  F  L  C  C  *  H  L  E  F  E  G  L  G  F  F  L  F  G  F  G  G  F  V  W  I  R  I  S  L  L  Q  A  I  *  E  V  R  C  L  H  Q  G  D  T  H  Y  F  H  L  P  V  V  A  P  M  *  S  Q  N  N  L  D  *  Q  I  Y  L  P  *  D  L  E  M  L  Q  N  Q  V  I  L  V  M  V  C  R  Q  I  Q  A  C  L  V  L  I  *  A  E  C  L  I  T  H  Q  E  N  L  V  I  G  V  P  T  Q  K  F  L  L  F  L  M  I  L  A  L  I  V  I  L  A  L  L  D  *  M  D  R  L  C  Q  M  R  L  R  R  T  S  C  Q  C  T  L  T  W  I  S  S  I  L  Q  L  C  L  L  N  S  K  W  V  S  L  L  Q  L  L  Q  V  H  H  K  Q  Q  Q  W  L  Q  E  Q  I  N  L  L  L  L  L  V  R  S  Q  E  L  D  I  S  I  A  S  P  W  M  V  Q  L  Q  S  S  Q  R  C  S  C  Q  E  W  K  S  L  L  Q  L  K  L  R  K  P  R  Q  L  Q  S  L  L  N  L  L  L  L  I  L  N  V  P  S   : G  F  G  P  T  G  S  Q  L  Q  D  Q  R  K  G  K  *  D  I  *  Q  S  L  R  E  K  F  R  L  C  K  R  K  Q  L  L  Y  L  L  S  *  P  Y  C  R :   E  I  Q  T  A  *  M  L  K  T  V  N  L  N  C  V  Y  K  Q  W  N  N  R  F  T  C  K  M  :  R  *  M  M  L  *  R  R  R  Y  S  I  *  K  C  *  L  G  K  A  *  Q  M  V  D  L  *  *  T  S  Q  Q  P  L  E  A  I  S  S  S  T  L  T  T  R  Q  C  I  H  C  W  L  H  N  N  F  N  S  S  S  Y  I  L  I  S  N  N  T  S  F  S  N  I  S  Y  T  S  F  S  S  N  S  C  S  T  N  N  S  N  S  N  L  L  C  S  S  S  S  S  R  I  N  F  H  K  P  E  M  *  C  Q  E  V  L  C  H  L  L  K  M  K  T  L  L  M  L  V  L  *  Q  R  I  E  Q  L  M  A  R  E  T  G  D  G  V  C  F  K  N  H  H  V  F  S  H  L  A  A  H  F  C  V  S  K  S  S  R  V  E  T  T  S  S  S  G  S  L  A  F  S  *  L  L  H  L  H  F  S  T  F  V  G  S  F  D  F  *  L  K  L  F  K  S  H  S  M  H  M  S  F  C  Q  L  S  T  *  F  S  S  C  Y  Q  Y  C  W  W  *  F  F  W  T  S  I  T  Y  I  S  L :   E  K  V  K </first_frame>
            <second_frame>  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  *  A  F  P  F  S  L  S  H  V  I  K  L  L  P  S  A  S  A  S  L  F  T  F  F  P  S  L  Q  I  *  F  Q  S  *  S  K  P   : *  G  I  D  L  G  *  A  C  L  V  F  A  E  S  T  G  S  Q  Q  G  V  S  C  S   : E  E  K  Q  L  G  L  *  F  Y  G  F  P  A  I  M  F  L  L  *  P  G  K  S  I  I  T  C  *  F  L  V  F  C  W  Y  G  S  C  W  S  I  Y  I  C  V  G  C  W  V  C  S  C  A  V  N  I  W  N  L  K  G  W  G  F  F  C  L  D  L  E  G  L  Y  G  *  G  *  V  F  F  K  P  Y  R  R  F  V  A  S  I  R  E  I  L  I  I  F  T  S  R  *  *  L  Q  C  K  V  R  T  T  W  I  S  K  F  T  S  L  R  T  W  K  C  F  R  I  R  S  F  W  S  W  F  V  G  R  F  K  P  V  *  S  *  Y  K  P  N  V  *  *  P  T  K  K  I  W  S  *  A  C  P  L  R  N  S  Y  S  S  *  *  Y  *  L  *  *  *  S  W  R  C  W  T  R  W  T  V  S  V  R  *  D  *  G  G  H  L  V  N  V  P  *  H  G  *  V  Q  F  F  N  S  V  F  *  I  P  S  G  *  V  F  F  S  C  S  R  F  I  T  N  N  S  N  G  F  R  N  K  *  I  C  S  Y  C  *  *  E  A  K  S  *  T  S  A  *  P  V  H  G  W  F  N  Y  N  Q  A  R  D  A  H  V  R  S  G  R  A  F  F  S  *  N  *  E  S  H  V  S  C  K  A  C  *  T  C  S  Y  *  S  *  T  C  Q  A  :  D  L  G  Q  Q  A  V  S  C  K  I  K  G  K  E  N  E  I  Y  S  R  A  *  E  K  S  S  D  S  A  N  G  S  N  Y  F  I  Y  S  V  D  P  I  A   : E  R  Y  K  R  P  E  C  *  K  Q  *  T  *  T  A  F  T  N  N  G  T  T  G  S  L  A  R  C :   V  E  *  C  F  K  G  G  D  T  A  S  E  S  A  N  W  A  R  H  S  K  W  W  T  Y  D  E  L  P  S  N  L  W  R  Q  S  A  V  L  L  *  Q  P  G  N  A  Y  I  V  G  C  T  T  T  S  T  A  P  A  T  F  S  *  A  T  T  P  V  S  A  T  S  A  T  P  V  S  A  A  T  V  A  A  P  T  T  A  T  A  T  S  Y  A  A  A  A  A  A  G  S  T  F  T  S  R  R  C  D  V  K  R  F  S  V  I  S  S  K  *  K  R  F  *  C  *  F  C  S  K  G  L  N  S  *  W  P  E  R  Q  E  M  V  Y  V  L  K  I  I  M  C  F  P  I  *  Q  L  I  F  V  F  Q  N  H  H  V  L  K  Q  H  L  A  Q  V  L  L  L  S  V  S  S  F  I  C  I  L  V  L  L  *  G  H  L  T  F  S  *  N  C  S  N  P  I  L  C  I  C  H  F  V  N  Y  Q  H  D  F  L  H  V  T  N  I  V  G  G  S  F  F  G  H  Q  S  L  I  S  L   : *  K  K  L   </second_frame>
            <third_frame>   F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  K  L  F  P  F  L  S  R  M  *  *  S  C  F  L  L  L  L  L  P  F  S  H  F  S  L  L  C  R  S  N  F  K  A  N  R  N  R  :  R  E  L  I  W  D  K  L  V  W  C  L  R  N  L  Q  G  L  S  K  G  F  H  V  L  :  R  K  S  N  L  D  C  D  F  M  V  F  L  L  *  C  S  C  F  D  R  G  K  V  S  L  L  V  D  F  W  F  S  V  G  T  V  L  V  G  V  Y  I  Y  V  W  D  V  G  F  V  P  V  L  L  T  F  G  I  *  R  V  G  V  F  S  V  W  I  W  R  V  C  M  D  K  D  K  S  S  S  S  H  I  G  G  S  L  P  P  S  G  R  Y  S  L  F  S  P  P  G  S  S  S  N  V  K  S  E  Q  P  G  L  A  N  L  P  P  L  G  P  G  N  A  S  E  S  G  H  F  G  H  G  L  S  A  D  S  S  L  F  S  L  D  I  S  R  M  S  D  N  P  P  R  K  F  G  H  R  R  A  H  S  E  I  L  T  L  P  D  D  I  S  F  D  S  D  L  G  V  V  G  L  D  G  P  S  L  S  D  E  T  E  E  D  I  L  S  M  Y  L  D  M  D  K  F  N  S  S  T  L  S  S  E  F  Q  V  G  E  S  S  S  A  A  P  G  S  S  Q  T  T  A  M  A  S  G  T  N  K  F  A  P  T  V  S  E  K  P  R  V  R  H  Q  H  S  Q  S  M  D  G  S  T  T  I  K  P  E  M  L  M  S  G  V  E  E  P  S  S  A  E  T  K  K  A  T  S  A  A  K  L  A  E  L  A  L  I  D  P  K  R  A  K  R :   I  W  A  N  R  Q  S  A  A  R  S  K  E  R  K  M  R  Y  I  A  E  L  E  R  K  V  Q  T  L  Q  T  E  A  T  T  L  S  T  Q  L  T  L  L  Q  :  R  D  T  N  G  L  N  A  E  N  S  E  L  K  L  R  L  Q  T  M  E  Q  Q  V  H  L  Q  D   : A  L  N  D  A  L  K  E  E  I  Q  H  L  K  V  L  T  G  Q  G  I  A  N  G  G  P  M  M  N  F  P  A  T  F  G  G  N  Q  Q  F  Y  S  N  N  Q  A  M  H  T  L  L  A  A  Q  Q  L  Q  Q  L  Q  L  H  S  H  K  Q  Q  H  Q  F  Q  Q  H  Q  L  H  Q  F  Q  Q  Q  Q  L  Q  H  Q  Q  Q  Q  Q  Q  P  L  M  Q  Q  Q  Q  Q  Q  D  Q  L  S  Q  A  G  D  V  M  S  R  G  S  L  S  S  P  Q  N  E  N  A  S  D  V  S  S  V  A  K  D  *  T  A  D  G  Q  R  D  R  R  W  C  M  F  *  K  S  S  C  V  F  P  S  S  S  S  F  L  C  F  K  I  I  T  C  *  N  N  I  *  L  R  F  S  C  F  Q  L  A  P  S  S  A  F  *  Y  F  C  R  V  I  *  L  L  V  E  I  V  Q  I  P  F  Y  A  Y  V  I  L  S  T  I  N  M  I  F  F  M  L  P  I  L  L  V  V  V  F  L  D  I  N  H  L  Y  L  S  :  R  K  S  *  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0167M06.1" strand="-"/>
                <serials PGL_serial="5" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="71350" stop="70623"/>
                    <exon start="66698" stop="66566"/>
                    <exon start="66312" stop="66228"/>
                    <exon start="65173" stop="64776"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1341</number_coding_nucleotides>
                  <number_encoded_amino_acids>447</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RVGVFSVWIWRVCMDKDKSSSSHIGGSLPPSGRYSLFSPPGSSSNVKSEQPGLANLPPLGPGNASESGHFGHGLSADSSLFSLDISRMSDNPPRKFGHRRAHSEILTLPDDISFDSDLGVVGLDGPSLSDETEEDILSMYLDMDKFNSSTLSSEFQVGESSSAAPGSSQTTAMASGTNKFAPTVSEKPRVRHQHSQSMDGSTTIKPEMLMSGVEEPSSAETKKATSAAKLAELALIDPKRAKRIWANRQSAARSKERKMRYIAELERKVQTLQTEATTLSTQLTLLQRDTNGLNAENSELKLRLQTMEQQVHLQDALNDALKEEIQHLKVLTGQGIANGGPMMNFPATFGGNQQFYSNNQAMHTLLAAQQLQQLQLHSHKQQHQFQQHQLHQFQQQQLQHQQQQQQPLMQQQQQQDQLSQAGDVMSRGSLSSPQNENASDVSSVAKD*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0167M06.1" strand="-"/>
                <serials PGL_serial="5" AGS_serial="3" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="72139" stop="71949"/>
                    <exon start="71674" stop="71665"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>198</number_coding_nucleotides>
                  <number_encoded_amino_acids>66</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FFFFFFFFFFFFFFFFFFFFFFFFFLSFSLFSLACDKAASFCFCFPFHIFPFSADLISKLIETVGN*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="4">
          <exon_coordinates>
            <exon e_start="72028" e_stop="71949"/>
            <exon e_start="71733" e_stop="71728"/>
            <exon e_start="71674" e_stop="70623"/>
            <exon e_start="66698" e_stop="66678"/>
            <exon e_start="64883" e_stop="64460"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.000" e_score="0.975"/>
          <exon-intron don_prob="0.900" acc_prob="0.999" e_score="0.500"/>
          <exon-intron don_prob="1.000" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="1.000"/>
          <exon-only e_score="0.995"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.975">
            <gDNA_exon_boundary e_start="72028" e_stop="71949" e_length="80"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.000">
            <gDNA_intron_boundary i_start="71948" i_stop="71734" i_length="215"/>
          </intron>
          <exon e_serial="2" e_score="0.500">
            <gDNA_exon_boundary e_start="71733" e_stop="71728" e_length="6"/>
          </exon>
          <intron i_serial="2" don_prob="0.900" acc_prob="0.999">
            <gDNA_intron_boundary i_start="71727" i_stop="71675" i_length="53"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="71674" e_stop="70623" e_length="1052"/>
          </exon>
          <intron i_serial="3" don_prob="1.000" acc_prob="0.996">
            <gDNA_intron_boundary i_start="70622" i_stop="66699" i_length="3924"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="66698" e_stop="66678" e_length="21"/>
          </exon>
          <intron i_serial="4" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="66677" i_stop="64884" i_length="1794"/>
          </intron>
          <exon e_serial="5" e_score="0.995">
            <gDNA_exon_boundary e_start="64883" e_stop="64460" e_length="424"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="72028" stop="71949"/>
              <exon start="71733" stop="71728"/>
              <exon start="71674" stop="71127"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E547369" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="72027" stop="71949"/>
              <exon start="71733" stop="71728"/>
              <exon start="71674" stop="71441"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E362135" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71316" stop="70642"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E379230" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71316" stop="70864"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E200371" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70675" stop="70623"/>
              <exon start="66698" stop="66678"/>
              <exon start="64883" stop="64460"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E327563" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="4" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GCTGCTTCCTTCTGCTTCTGCTTCCCTTTTCACATTTTTCCCTTCTCTGCAGATCTAATTTCAAAGCTAATCGAAACCGT : ATCTTT : AGGGAATTGATCTGGGATAAGCTTGTTTGGTGTTTGCGGAATCTACAGGGTCTCAGCAAGGGGTTTCATGTTCTGGTATAGCTAACTTTTGTTAAAGTAATTCGGTTTCGGTGGAATTTGAATACCCCATGATTTTAAATGCAGAGGAAAAGCAACTTGGATTGTGATTTTATGGTTTTCCTGCTATAATGTTCTTGCTTTGACCGGGGAAAAGTATCATTACTTGTTGATTTTTGGTTTTCTGTTGGTACGGTTCTTGTTGGAGTATATATATATGTGTGGGATGTTGGGTTTGTTCCTGTGCTGTTAACATTTGGAATTTGAAGGGTTGGGGTTTTTTCTGTTTGGATTTGGAGGGTTTGTATGGATAAGGATAAGTCTTCTTCAAGCCATATAGGAGGTTCGTTGCCTCCATCAGGGAGATACTCATTATTTTCACCTCCCGGTAGTAGCTCCAATGTAAAGTCAGAACAACCTGGATTAGCAAATTTACCTCCCTTAGGACCTGGAAATGCTTCAGAATCAGGTCATTTTGGTCATGGTTTGTCGGCAGATTCAAGCCTGTTTAGTCTTGATATAAGCCGAATGTCTGATAACCCACCAAGAAAATTTGGTCATAGGCGTGCCCACTCAGAAATTCTTACTCTTCCTGATGATATTAGCTTTGATAGTGATCTTGGCGTTGTTGGACTAGATGGACCGTCTCTGTCAGATGAGACTGAGGAGGACATCTTGTCAATGTACCTTGACATGGATAAGTTCAATTCTTCAACTCTGTCTTCTGAATTCCAAGTGGGTGAGTCTTCTTCAGCTGCTCCAGGTTCATCACAAACAACAGCAATGGCTTCAGGAACAAATAAATTTGCTCCTACTGTTAGTGAGAAGCCAAGAGTTAGACATCAGCATAGCCAGTCCATGGATGGTTCAACTACAATCAAGCCAGAGATGCTCATGTCAGGAGTGGAAGAGCCTTCTTCAGCTGAAACTAAGAAAGCCACGTCAGCTGCAAAGCTTGCTGAACTTGCTCTTATTGATCCTAAACGTGCCAAGCG : GATTTGGGCCAACAGGCAGTC : CAGCAGCAGGATCAACTTTCACAAGCCGGAGATGTGATGTCAAGAGGTTCTCTGTCATCTCCTCAAAATGAAAACGCTTCTGATGTTAGTTCTGTAGCAAAGGATTGAACAGCTGATGGCCAGAGAGACAGGAGATGGTGTATGTTTTAAAAATCATCATGTGTTTTCCCATCTAGCAGCTCATTTTTGTGTTTCAAAATCATCACGTGTTGAAACAACATCTAGCTCAGGTTCTCTTGCTTTCAGTTAGCTCCTTCATCTGCATTTTAGTACTTTTGTAGGGTCATTTGACTTTTAGTTGAAATTGTTCAAATCCCATTCTATGCATATGTCATTTTGTCAACTATCAACATGATTTTCTTCATGTTACCAATATTGTTGGTGGTAGTTTTTTTGGACATCAATCACTTATATCTCTCTCACA</gDNA_template>
            <first_frame> A  A  S  F  C  F  C  F  P  F  H  I  F  P  F  S  A  D  L  I  S  K  L  I  E  T  V :   S  L :   G  N  *  S  G  I  S  L  F  G  V  C  G  I  Y  R  V  S  A  R  G  F  M  F  W  Y  S  *  L  L  L  K  *  F  G  F  G  G  I  *  I  P  H  D  F  K  C  R  G  K  A  T  W  I  V  I  L  W  F  S  C  Y  N  V  L  A  L  T  G  E  K  Y  H  Y  L  L  I  F  G  F  L  L  V  R  F  L  L  E  Y  I  Y  M  C  G  M  L  G  L  F  L  C  C  *  H  L  E  F  E  G  L  G  F  F  L  F  G  F  G  G  F  V  W  I  R  I  S  L  L  Q  A  I  *  E  V  R  C  L  H  Q  G  D  T  H  Y  F  H  L  P  V  V  A  P  M  *  S  Q  N  N  L  D  *  Q  I  Y  L  P  *  D  L  E  M  L  Q  N  Q  V  I  L  V  M  V  C  R  Q  I  Q  A  C  L  V  L  I  *  A  E  C  L  I  T  H  Q  E  N  L  V  I  G  V  P  T  Q  K  F  L  L  F  L  M  I  L  A  L  I  V  I  L  A  L  L  D  *  M  D  R  L  C  Q  M  R  L  R  R  T  S  C  Q  C  T  L  T  W  I  S  S  I  L  Q  L  C  L  L  N  S  K  W  V  S  L  L  Q  L  L  Q  V  H  H  K  Q  Q  Q  W  L  Q  E  Q  I  N  L  L  L  L  L  V  R  S  Q  E  L  D  I  S  I  A  S  P  W  M  V  Q  L  Q  S  S  Q  R  C  S  C  Q  E  W  K  S  L  L  Q  L  K  L  R  K  P  R  Q  L  Q  S  L  L  N  L  L  L  L  I  L  N  V  P  S   : G  F  G  P  T  G  S   : P  A  A  G  S  T  F  T  S  R  R  C  D  V  K  R  F  S  V  I  S  S  K  *  K  R  F  *  C  *  F  C  S  K  G  L  N  S  *  W  P  E  R  Q  E  M  V  Y  V  L  K  I  I  M  C  F  P  I  *  Q  L  I  F  V  F  Q  N  H  H  V  L  K  Q  H  L  A  Q  V  L  L  L  S  V  S  S  F  I  C  I  L  V  L  L  *  G  H  L  T  F  S  *  N  C  S  N  P  I  L  C  I  C  H  F  V  N  Y  Q  H  D  F  L  H  V  T  N  I  V  G  G  S  F  F  G  H  Q  S  L  I  S  L  S   </first_frame>
            <second_frame>  L  L  P  S  A  S  A  S  L  F  T  F  F  P  S  L  Q  I  *  F  Q  S  *  S  K  P   : Y  L   : *  G  I  D  L  G  *  A  C  L  V  F  A  E  S  T  G  S  Q  Q  G  V  S  C  S  G  I  A  N  F  C  *  S  N  S  V  S  V  E  F  E  Y  P  M  I  L  N  A  E  E  K  Q  L  G  L  *  F  Y  G  F  P  A  I  M  F  L  L  *  P  G  K  S  I  I  T  C  *  F  L  V  F  C  W  Y  G  S  C  W  S  I  Y  I  C  V  G  C  W  V  C  S  C  A  V  N  I  W  N  L  K  G  W  G  F  F  C  L  D  L  E  G  L  Y  G  *  G  *  V  F  F  K  P  Y  R  R  F  V  A  S  I  R  E  I  L  I  I  F  T  S  R  *  *  L  Q  C  K  V  R  T  T  W  I  S  K  F  T  S  L  R  T  W  K  C  F  R  I  R  S  F  W  S  W  F  V  G  R  F  K  P  V  *  S  *  Y  K  P  N  V  *  *  P  T  K  K  I  W  S  *  A  C  P  L  R  N  S  Y  S  S  *  *  Y  *  L  *  *  *  S  W  R  C  W  T  R  W  T  V  S  V  R  *  D  *  G  G  H  L  V  N  V  P  *  H  G  *  V  Q  F  F  N  S  V  F  *  I  P  S  G  *  V  F  F  S  C  S  R  F  I  T  N  N  S  N  G  F  R  N  K  *  I  C  S  Y  C  *  *  E  A  K  S  *  T  S  A  *  P  V  H  G  W  F  N  Y  N  Q  A  R  D  A  H  V  R  S  G  R  A  F  F  S  *  N  *  E  S  H  V  S  C  K  A  C  *  T  C  S  Y  *  S  *  T  C  Q  A  :  D  L  G  Q  Q  A  V  :  Q  Q  Q  D  Q  L  S  Q  A  G  D  V  M  S  R  G  S  L  S  S  P  Q  N  E  N  A  S  D  V  S  S  V  A  K  D  *  T  A  D  G  Q  R  D  R  R  W  C  M  F  *  K  S  S  C  V  F  P  S  S  S  S  F  L  C  F  K  I  I  T  C  *  N  N  I  *  L  R  F  S  C  F  Q  L  A  P  S  S  A  F  *  Y  F  C  R  V  I  *  L  L  V  E  I  V  Q  I  P  F  Y  A  Y  V  I  L  S  T  I  N  M  I  F  F  M  L  P  I  L  L  V  V  V  F  L  D  I  N  H  L  Y  L  S  H  </second_frame>
            <third_frame>   C  F  L  L  L  L  L  P  F  S  H  F  S  L  L  C  R  S  N  F  K  A  N  R  N  R  :  I  F  :  R  E  L  I  W  D  K  L  V  W  C  L  R  N  L  Q  G  L  S  K  G  F  H  V  L  V  *  L  T  F  V  K  V  I  R  F  R  W  N  L  N  T  P  *  F  *  M  Q  R  K  S  N  L  D  C  D  F  M  V  F  L  L  *  C  S  C  F  D  R  G  K  V  S  L  L  V  D  F  W  F  S  V  G  T  V  L  V  G  V  Y  I  Y  V  W  D  V  G  F  V  P  V  L  L  T  F  G  I  *  R  V  G  V  F  S  V  W  I  W  R  V  C  M  D  K  D  K  S  S  S  S  H  I  G  G  S  L  P  P  S  G  R  Y  S  L  F  S  P  P  G  S  S  S  N  V  K  S  E  Q  P  G  L  A  N  L  P  P  L  G  P  G  N  A  S  E  S  G  H  F  G  H  G  L  S  A  D  S  S  L  F  S  L  D  I  S  R  M  S  D  N  P  P  R  K  F  G  H  R  R  A  H  S  E  I  L  T  L  P  D  D  I  S  F  D  S  D  L  G  V  V  G  L  D  G  P  S  L  S  D  E  T  E  E  D  I  L  S  M  Y  L  D  M  D  K  F  N  S  S  T  L  S  S  E  F  Q  V  G  E  S  S  S  A  A  P  G  S  S  Q  T  T  A  M  A  S  G  T  N  K  F  A  P  T  V  S  E  K  P  R  V  R  H  Q  H  S  Q  S  M  D  G  S  T  T  I  K  P  E  M  L  M  S  G  V  E  E  P  S  S  A  E  T  K  K  A  T  S  A  A  K  L  A  E  L  A  L  I  D  P  K  R  A  K  R :   I  W  A  N  R  Q  S :   S  S  R  I  N  F  H  K  P  E  M  *  C  Q  E  V  L  C  H  L  L  K  M  K  T  L  L  M  L  V  L  *  Q  R  I  E  Q  L  M  A  R  E  T  G  D  G  V  C  F  K  N  H  H  V  F  S  H  L  A  A  H  F  C  V  S  K  S  S  R  V  E  T  T  S  S  S  G  S  L  A  F  S  *  L  L  H  L  H  F  S  T  F  V  G  S  F  D  F  *  L  K  L  F  K  S  H  S  M  H  M  S  F  C  Q  L  S  T  *  F  S  S  C  Y  Q  Y  C  W  W  *  F  F  W  T  S  I  T  Y  I  S  L  T </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0167M06.1" strand="-"/>
                <serials PGL_serial="5" AGS_serial="4" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="71350" stop="70623"/>
                    <exon start="66698" stop="66678"/>
                    <exon start="64883" stop="64847"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>783</number_coding_nucleotides>
                  <number_encoded_amino_acids>261</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RVGVFSVWIWRVCMDKDKSSSSHIGGSLPPSGRYSLFSPPGSSSNVKSEQPGLANLPPLGPGNASESGHFGHGLSADSSLFSLDISRMSDNPPRKFGHRRAHSEILTLPDDISFDSDLGVVGLDGPSLSDETEEDILSMYLDMDKFNSSTLSSEFQVGESSSAAPGSSQTTAMASGTNKFAPTVSEKPRVRHQHSQSMDGSTTIKPEMLMSGVEEPSSAETKKATSAAKLAELALIDPKRAKRIWANRQSSSRINFHKPEM*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="+" PGL_start="73981" PGL_stop="83078"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="73981" e_stop="74059"/>
            <exon e_start="74825" e_stop="74918"/>
            <exon e_start="75011" e_stop="75120"/>
            <exon e_start="82489" e_stop="83078"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.726" acc_prob="0.991" e_score="1.000"/>
          <exon-intron don_prob="0.958" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.983" acc_prob="0.993" e_score="1.000"/>
          <exon-only e_score="0.993"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="73981" e_stop="74059" e_length="79"/>
          </exon>
          <intron i_serial="1" don_prob="0.726" acc_prob="0.991">
            <gDNA_intron_boundary i_start="74060" i_stop="74824" i_length="765"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="74825" e_stop="74918" e_length="94"/>
          </exon>
          <intron i_serial="2" don_prob="0.958" acc_prob="0.997">
            <gDNA_intron_boundary i_start="74919" i_stop="75010" i_length="92"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="75011" e_stop="75120" e_length="110"/>
          </exon>
          <intron i_serial="3" don_prob="0.983" acc_prob="0.993">
            <gDNA_intron_boundary i_start="75121" i_stop="82488" i_length="7368"/>
          </intron>
          <exon e_serial="4" e_score="0.993">
            <gDNA_exon_boundary e_start="82489" e_stop="83078" e_length="590"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="73981" stop="74059"/>
              <exon start="74825" stop="74918"/>
              <exon start="75011" stop="75120"/>
              <exon start="82489" stop="82919"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E747375" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="73981" stop="74059"/>
              <exon start="74825" stop="74918"/>
              <exon start="75011" stop="75120"/>
              <exon start="82489" stop="82752"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E308642" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="73981" stop="74059"/>
              <exon start="74825" stop="74918"/>
              <exon start="75011" stop="75120"/>
              <exon start="82489" stop="82638"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E307521" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="73981" stop="74059"/>
              <exon start="74825" stop="74918"/>
              <exon start="75011" stop="75120"/>
              <exon start="82489" stop="82539"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E335619" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="73981" stop="74059"/>
              <exon start="74825" stop="74918"/>
              <exon start="75011" stop="75028"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E305395" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="73985" stop="74059"/>
              <exon start="74825" stop="74918"/>
              <exon start="75011" stop="75120"/>
              <exon start="82489" stop="82816"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E287436" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="73985" stop="74059"/>
              <exon start="74825" stop="74918"/>
              <exon start="75011" stop="75120"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E335625" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="73996" stop="74059"/>
              <exon start="74825" stop="74918"/>
              <exon start="75011" stop="75120"/>
              <exon start="82489" stop="82888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E723581" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="73997" stop="74059"/>
              <exon start="74825" stop="74918"/>
              <exon start="75011" stop="75120"/>
              <exon start="82489" stop="83078"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E704851" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="74000" stop="74059"/>
              <exon start="74825" stop="74918"/>
              <exon start="75011" stop="75120"/>
              <exon start="82489" stop="82903"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E704742" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="74017" stop="74059"/>
              <exon start="74825" stop="74918"/>
              <exon start="75011" stop="75120"/>
              <exon start="82489" stop="82943"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E262988" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="74017" stop="74059"/>
              <exon start="74825" stop="74918"/>
              <exon start="75011" stop="75120"/>
              <exon start="82489" stop="82810"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E264799" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="74825" stop="74918"/>
              <exon start="75011" stop="75120"/>
              <exon start="82489" stop="82899"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E418034" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="74825" stop="74918"/>
              <exon start="75011" stop="75120"/>
              <exon start="82489" stop="82879"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E418033" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="74825" stop="74918"/>
              <exon start="75011" stop="75120"/>
              <exon start="82489" stop="82764"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E447566" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="74838" stop="74918"/>
              <exon start="75011" stop="75120"/>
              <exon start="82489" stop="82694"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E466329" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82495" stop="82882"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E357811" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82526" stop="82769"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E540364" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTTCTTTGACCCATCGCTTCTCTTCATCGCTGTGTTGAAGTTTTGGTTTTTGAGTTTTGAGATTTGCTGTTCGAAGATG : GTGCGATTACAGCCAGACCCATTCCTCAATGAACTGACGAGTATGTTTGAGCGAACTACTGAGCATGGTTCCGTTTGGGTTACGCTTAAACACT : CTTCTGATAAATCTAAAGCCCAACGGAATAAGATGAAGACAGCTGGTGAAACTCTTGAATTTAAGTGCCTCATCCGAGCAACTGATGGGAAAAAGAATATTTCCACAATG : GTTGGAGCAAAAGATCACCAGCGTTTCCAAGCATCTTATGCAATTTTGCTGAAGGCCCGGTTGACTGCACTAAAGAAGAGGGAGAGGAAGGACAAGAGGAAGGCTACTGATTCTGACAAAAAGATGGATATTTCGAAAAAGAAATCTGCTGCTGCTAAAGCCTCTACATGAAACTTTAGTCCTTTGGTTTATTCCCCCATTTTGTTTCTAGGATAGAGTTGTAGGATTTGAACCCCATCCATTTGGGGCGACAAGTCTGAAACTTCATTACAACTCCACTGCATAGAATGAAGAAAGGAGGTGTTTTTACTCAATTTGATTATTCACATCTAAATTAGTCAAACTTTTTAAAGAGCTTGTTGGGTTATGGAACAGTTGAAGGAATTTTGTCATAATCTTGATCTTTTAATTCCTTGAACAACAGCTTTGGCAATTGAAAGTAGATGGGACCAAATTAAAAGTAGTATGCCTACATACTTGAATGTCATGTCAACTGCATATGTCCATACTTTTTGGTTGTGGGAACTTAAAATGACATTTTTTTGCTTCTTTTTGTTCAACCAGTTCTTTTTCCACTGTTCCAAAACCAT</gDNA_template>
            <first_frame> F  L  *  P  I  A  S  L  H  R  C  V  E  V  L  V  F  E  F  *  D  L  L  F  E  D   : G  A  I  T  A  R  P  I  P  Q  *  T  D  E  Y  V  *  A  N  Y  *  A  W  F  R  L  G  Y  A  *  T  L :   F  *  *  I  *  S  P  T  E  *  D  E  D  S  W  *  N  S  *  I  *  V  P  H  P  S  N  *  W  E  K  E  Y  F  H  N   : G  W  S  K  R  S  P  A  F  P  S  I  L  C  N  F  A  E  G  P  V  D  C  T  K  E  E  G  E  E  G  Q  E  E  G  Y  *  F  *  Q  K  D  G  Y  F  E  K  E  I  C  C  C  *  S  L  Y  M  K  L  *  S  F  G  L  F  P  H  F  V  S  R  I  E  L  *  D  L  N  P  I  H  L  G  R  Q  V  *  N  F  I  T  T  P  L  H  R  M  K  K  G  G  V  F  T  Q  F  D  Y  S  H  L  N  *  S  N  F  L  K  S  L  L  G  Y  G  T  V  E  G  I  L  S  *  S  *  S  F  N  S  L  N  N  S  F  G  N  *  K  *  M  G  P  N  *  K  *  Y  A  Y  I  L  E  C  H  V  N  C  I  C  P  Y  F  L  V  V  G  T  *  N  D  I  F  L  L  L  F  V  Q  P  V  L  F  P  L  F  Q  N  H </first_frame>
            <second_frame>  F  F  D  P  S  L  L  F  I  A  V  L  K  F  W  F  L  S  F  E  I  C  C  S  K  M  :  V  R  L  Q  P  D  P  F  L  N  E  L  T  S  M  F  E  R  T  T  E  H  G  S  V  W  V  T  L  K  H   : S  S  D  K  S  K  A  Q  R  N  K  M  K  T  A  G  E  T  L  E  F  K  C  L  I  R  A  T  D  G  K  K  N  I  S  T  M  :  V  G  A  K  D  H  Q  R  F  Q  A  S  Y  A  I  L  L  K  A  R  L  T  A  L  K  K  R  E  R  K  D  K  R  K  A  T  D  S  D  K  K  M  D  I  S  K  K  K  S  A  A  A  K  A  S  T  *  N  F  S  P  L  V  Y  S  P  I  L  F  L  G  *  S  C  R  I  *  T  P  S  I  W  G  D  K  S  E  T  S  L  Q  L  H  C  I  E  *  R  K  E  V  F  L  L  N  L  I  I  H  I  *  I  S  Q  T  F  *  R  A  C  W  V  M  E  Q  L  K  E  F  C  H  N  L  D  L  L  I  P  *  T  T  A  L  A  I  E  S  R  W  D  Q  I  K  S  S  M  P  T  Y  L  N  V  M  S  T  A  Y  V  H  T  F  W  L  W  E  L  K  M  T  F  F  C  F  F  L  F  N  Q  F  F  F  H  C  S  K  T   </second_frame>
            <third_frame>   S  L  T  H  R  F  S  S  S  L  C  *  S  F  G  F  *  V  L  R  F  A  V  R  R  W :   C  D  Y  S  Q  T  H  S  S  M  N  *  R  V  C  L  S  E  L  L  S  M  V  P  F  G  L  R  L  N  T  :  L  L  I  N  L  K  P  N  G  I  R  *  R  Q  L  V  K  L  L  N  L  S  A  S  S  E  Q  L  M  G  K  R  I  F  P  Q  W :   L  E  Q  K  I  T  S  V  S  K  H  L  M  Q  F  C  *  R  P  G  *  L  H  *  R  R  G  R  G  R  T  R  G  R  L  L  I  L  T  K  R  W  I  F  R  K  R  N  L  L  L  L  K  P  L  H  E  T  L  V  L  W  F  I  P  P  F  C  F  *  D  R  V  V  G  F  E  P  H  P  F  G  A  T  S  L  K  L  H  Y  N  S  T  A  *  N  E  E  R  R  C  F  Y  S  I  *  L  F  T  S  K  L  V  K  L  F  K  E  L  V  G  L  W  N  S  *  R  N  F  V  I  I  L  I  F  *  F  L  E  Q  Q  L  W  Q  L  K  V  D  G  T  K  L  K  V  V  C  L  H  T  *  M  S  C  Q  L  H  M  S  I  L  F  G  C  G  N  L  K  *  H  F  F  A  S  F  C  S  T  S  S  F  S  T  V  P  K  P  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0167M06.1" strand="+"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="73982" stop="74059"/>
                    <exon start="74825" stop="74918"/>
                    <exon start="75011" stop="75120"/>
                    <exon start="82489" stop="82659"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>450</number_coding_nucleotides>
                  <number_encoded_amino_acids>150</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FFDPSLLFIAVLKFWFLSFEICCSKMVRLQPDPFLNELTSMFERTTEHGSVWVTLKHSSDKSKAQRNKMKTAGETLEFKCLIRATDGKKNISTMVGAKDHQRFQASYAILLKARLTALKKRERKDKRKATDSDKKMDISKKKSAAAKAST*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="73981" e_stop="74059"/>
            <exon e_start="74825" e_stop="74918"/>
            <exon e_start="75011" e_stop="75120"/>
            <exon e_start="82489" e_stop="82803"/>
            <exon e_start="82864" e_stop="82951"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.726" acc_prob="0.991" e_score="1.000"/>
          <exon-intron don_prob="0.958" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.983" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.052" e_score="0.956"/>
          <exon-only e_score="0.943"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="73981" e_stop="74059" e_length="79"/>
          </exon>
          <intron i_serial="1" don_prob="0.726" acc_prob="0.991">
            <gDNA_intron_boundary i_start="74060" i_stop="74824" i_length="765"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="74825" e_stop="74918" e_length="94"/>
          </exon>
          <intron i_serial="2" don_prob="0.958" acc_prob="0.997">
            <gDNA_intron_boundary i_start="74919" i_stop="75010" i_length="92"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="75011" e_stop="75120" e_length="110"/>
          </exon>
          <intron i_serial="3" don_prob="0.983" acc_prob="0.993">
            <gDNA_intron_boundary i_start="75121" i_stop="82488" i_length="7368"/>
          </intron>
          <exon e_serial="4" e_score="0.956">
            <gDNA_exon_boundary e_start="82489" e_stop="82803" e_length="315"/>
          </exon>
          <intron i_serial="4" don_prob="0.000" acc_prob="0.052">
            <gDNA_intron_boundary i_start="82804" i_stop="82863" i_length="60"/>
          </intron>
          <exon e_serial="5" e_score="0.943">
            <gDNA_exon_boundary e_start="82864" e_stop="82951" e_length="88"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="73981" stop="74059"/>
              <exon start="74825" stop="74918"/>
              <exon start="75011" stop="75120"/>
              <exon start="82489" stop="82752"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E308642" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="73981" stop="74059"/>
              <exon start="74825" stop="74918"/>
              <exon start="75011" stop="75120"/>
              <exon start="82489" stop="82638"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E307521" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="73981" stop="74059"/>
              <exon start="74825" stop="74918"/>
              <exon start="75011" stop="75120"/>
              <exon start="82489" stop="82539"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E335619" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="73981" stop="74059"/>
              <exon start="74825" stop="74918"/>
              <exon start="75011" stop="75028"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E305395" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="73985" stop="74059"/>
              <exon start="74825" stop="74918"/>
              <exon start="75011" stop="75120"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E335625" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="74825" stop="74918"/>
              <exon start="75011" stop="75120"/>
              <exon start="82489" stop="82764"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E447566" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="74838" stop="74918"/>
              <exon start="75011" stop="75120"/>
              <exon start="82489" stop="82803"/>
              <exon start="82864" stop="82951"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E459547" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="74838" stop="74918"/>
              <exon start="75011" stop="75120"/>
              <exon start="82489" stop="82803"/>
              <exon start="82864" stop="82951"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E466080" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="74838" stop="74918"/>
              <exon start="75011" stop="75120"/>
              <exon start="82489" stop="82694"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E466329" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82526" stop="82769"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E540364" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTTCTTTGACCCATCGCTTCTCTTCATCGCTGTGTTGAAGTTTTGGTTTTTGAGTTTTGAGATTTGCTGTTCGAAGATG : GTGCGATTACAGCCAGACCCATTCCTCAATGAACTGACGAGTATGTTTGAGCGAACTACTGAGCATGGTTCCGTTTGGGTTACGCTTAAACACT : CTTCTGATAAATCTAAAGCCCAACGGAATAAGATGAAGACAGCTGGTGAAACTCTTGAATTTAAGTGCCTCATCCGAGCAACTGATGGGAAAAAGAATATTTCCACAATG : GTTGGAGCAAAAGATCACCAGCGTTTCCAAGCATCTTATGCAATTTTGCTGAAGGCCCGGTTGACTGCACTAAAGAAGAGGGAGAGGAAGGACAAGAGGAAGGCTACTGATTCTGACAAAAAGATGGATATTTCGAAAAAGAAATCTGCTGCTGCTAAAGCCTCTACATGAAACTTTAGTCCTTTGGTTTATTCCCCCATTTTGTTTCTAGGATAGAGTTGTAGGATTTGAACCCCATCCATTTGGGGCGACAAGTCTGAAACTTCATTACAACTCCACTGCATAGAATGAAGAAAGGAGGTGTTTTTACTCAAT : TTGAAGGAATTTTGTCATAATCTTGATCTTTTAATTCCTTGAACAACAGCTTTGGCAATTGAAAGTAGATGGGACCAAATTAAAAGTA</gDNA_template>
            <first_frame> F  L  *  P  I  A  S  L  H  R  C  V  E  V  L  V  F  E  F  *  D  L  L  F  E  D   : G  A  I  T  A  R  P  I  P  Q  *  T  D  E  Y  V  *  A  N  Y  *  A  W  F  R  L  G  Y  A  *  T  L :   F  *  *  I  *  S  P  T  E  *  D  E  D  S  W  *  N  S  *  I  *  V  P  H  P  S  N  *  W  E  K  E  Y  F  H  N   : G  W  S  K  R  S  P  A  F  P  S  I  L  C  N  F  A  E  G  P  V  D  C  T  K  E  E  G  E  E  G  Q  E  E  G  Y  *  F  *  Q  K  D  G  Y  F  E  K  E  I  C  C  C  *  S  L  Y  M  K  L  *  S  F  G  L  F  P  H  F  V  S  R  I  E  L  *  D  L  N  P  I  H  L  G  R  Q  V  *  N  F  I  T  T  P  L  H  R  M  K  K  G  G  V  F  T  Q   : F  E  G  I  L  S  *  S  *  S  F  N  S  L  N  N  S  F  G  N  *  K  *  M  G  P  N  *  K   </first_frame>
            <second_frame>  F  F  D  P  S  L  L  F  I  A  V  L  K  F  W  F  L  S  F  E  I  C  C  S  K  M  :  V  R  L  Q  P  D  P  F  L  N  E  L  T  S  M  F  E  R  T  T  E  H  G  S  V  W  V  T  L  K  H   : S  S  D  K  S  K  A  Q  R  N  K  M  K  T  A  G  E  T  L  E  F  K  C  L  I  R  A  T  D  G  K  K  N  I  S  T  M  :  V  G  A  K  D  H  Q  R  F  Q  A  S  Y  A  I  L  L  K  A  R  L  T  A  L  K  K  R  E  R  K  D  K  R  K  A  T  D  S  D  K  K  M  D  I  S  K  K  K  S  A  A  A  K  A  S  T  *  N  F  S  P  L  V  Y  S  P  I  L  F  L  G  *  S  C  R  I  *  T  P  S  I  W  G  D  K  S  E  T  S  L  Q  L  H  C  I  E  *  R  K  E  V  F  L  L  N  :  L  K  E  F  C  H  N  L  D  L  L  I  P  *  T  T  A  L  A  I  E  S  R  W  D  Q  I  K  S  </second_frame>
            <third_frame>   S  L  T  H  R  F  S  S  S  L  C  *  S  F  G  F  *  V  L  R  F  A  V  R  R  W :   C  D  Y  S  Q  T  H  S  S  M  N  *  R  V  C  L  S  E  L  L  S  M  V  P  F  G  L  R  L  N  T  :  L  L  I  N  L  K  P  N  G  I  R  *  R  Q  L  V  K  L  L  N  L  S  A  S  S  E  Q  L  M  G  K  R  I  F  P  Q  W :   L  E  Q  K  I  T  S  V  S  K  H  L  M  Q  F  C  *  R  P  G  *  L  H  *  R  R  G  R  G  R  T  R  G  R  L  L  I  L  T  K  R  W  I  F  R  K  R  N  L  L  L  L  K  P  L  H  E  T  L  V  L  W  F  I  P  P  F  C  F  *  D  R  V  V  G  F  E  P  H  P  F  G  A  T  S  L  K  L  H  Y  N  S  T  A  *  N  E  E  R  R  C  F  Y  S  I :   *  R  N  F  V  I  I  L  I  F  *  F  L  E  Q  Q  L  W  Q  L  K  V  D  G  T  K  L  K  V </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0167M06.1" strand="+"/>
                <serials PGL_serial="6" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="73982" stop="74059"/>
                    <exon start="74825" stop="74918"/>
                    <exon start="75011" stop="75120"/>
                    <exon start="82489" stop="82659"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>450</number_coding_nucleotides>
                  <number_encoded_amino_acids>150</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FFDPSLLFIAVLKFWFLSFEICCSKMVRLQPDPFLNELTSMFERTTEHGSVWVTLKHSSDKSKAQRNKMKTAGETLEFKCLIRATDGKKNISTMVGAKDHQRFQASYAILLKARLTALKKRERKDKRKATDSDKKMDISKKKSAAAKAST*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="81918" e_stop="82066"/>
            <exon e_start="82489" e_stop="82882"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.892" acc_prob="0.993" e_score="0.906"/>
          <exon-only e_score="0.966"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.906">
            <gDNA_exon_boundary e_start="81918" e_stop="82066" e_length="149"/>
          </exon>
          <intron i_serial="1" don_prob="0.892" acc_prob="0.993">
            <gDNA_intron_boundary i_start="82067" i_stop="82488" i_length="422"/>
          </intron>
          <exon e_serial="2" e_score="0.966">
            <gDNA_exon_boundary e_start="82489" e_stop="82882" e_length="394"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81918" stop="82066"/>
              <exon start="82489" stop="82868"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E619540" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82495" stop="82882"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E357811" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82526" stop="82769"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E540364" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="3" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GCACATGCAAATACTGGTTGATTTGTTACTTCTTGAAATTTAGAAATTTACAAGGTTTTCACATGGTACATATTTCATGAAGTATGGGCTGATACAGCCCGTCATGTGTCTAAGAATGTGAACGTCCCTTTAGTATAGAACTTTATCTG : GTTGGAGCAAAAGATCACCAGCGTTTCCAAGCATCTTATGCAATTTTGCTGAAGGCCCGGTTGACTGCACTAAAGAAGAGGGAGAGGAAGGACAAGAGGAAGGCTACTGATTCTGACAAAAAGATGGATATTTCGAAAAAGAAATCTGCTGCTGCTAAAGCCTCTACATGAAACTTTAGTCCTTTGGTTTATTCCCCCATTTTGTTTCTAGGATAGAGTTGTAGGATTTGAACCCCATCCATTTGGGGCGACAAGTCTGAAACTTCATTACAACTCCACTGCATAGAATGAAGAAAGGAGGTGTTTTTACTCAATTTGATTATTCACATCTAAATTAGTCAAACTTTTTAAAGAGCTTGTTGGGTTATGGAACAGTTGAAGGAATTTTGTCATA</gDNA_template>
            <first_frame> A  H  A  N  T  G  *  F  V  T  S  *  N  L  E  I  Y  K  V  F  T  W  Y  I  F  H  E  V  W  A  D  T  A  R  H  V  S  K  N  V  N  V  P  L  V  *  N  F  I  W :   L  E  Q  K  I  T  S  V  S  K  H  L  M  Q  F  C  *  R  P  G  *  L  H  *  R  R  G  R  G  R  T  R  G  R  L  L  I  L  T  K  R  W  I  F  R  K  R  N  L  L  L  L  K  P  L  H  E  T  L  V  L  W  F  I  P  P  F  C  F  *  D  R  V  V  G  F  E  P  H  P  F  G  A  T  S  L  K  L  H  Y  N  S  T  A  *  N  E  E  R  R  C  F  Y  S  I  *  L  F  T  S  K  L  V  K  L  F  K  E  L  V  G  L  W  N  S  *  R  N  F  V  I </first_frame>
            <second_frame>  H  M  Q  I  L  V  D  L  L  L  L  E  I  *  K  F  T  R  F  S  H  G  T  Y  F  M  K  Y  G  L  I  Q  P  V  M  C  L  R  M  *  T  S  L  *  Y  R  T  L  S   : G  W  S  K  R  S  P  A  F  P  S  I  L  C  N  F  A  E  G  P  V  D  C  T  K  E  E  G  E  E  G  Q  E  E  G  Y  *  F  *  Q  K  D  G  Y  F  E  K  E  I  C  C  C  *  S  L  Y  M  K  L  *  S  F  G  L  F  P  H  F  V  S  R  I  E  L  *  D  L  N  P  I  H  L  G  R  Q  V  *  N  F  I  T  T  P  L  H  R  M  K  K  G  G  V  F  T  Q  F  D  Y  S  H  L  N  *  S  N  F  L  K  S  L  L  G  Y  G  T  V  E  G  I  L  S   </second_frame>
            <third_frame>   T  C  K  Y  W  L  I  C  Y  F  L  K  F  R  N  L  Q  G  F  H  M  V  H  I  S  *  S  M  G  *  Y  S  P  S  C  V  *  E  C  E  R  P  F  S  I  E  L  Y  L  :  V  G  A  K  D  H  Q  R  F  Q  A  S  Y  A  I  L  L  K  A  R  L  T  A  L  K  K  R  E  R  K  D  K  R  K  A  T  D  S  D  K  K  M  D  I  S  K  K  K  S  A  A  A  K  A  S  T  *  N  F  S  P  L  V  Y  S  P  I  L  F  L  G  *  S  C  R  I  *  T  P  S  I  W  G  D  K  S  E  T  S  L  Q  L  H  C  I  E  *  R  K  E  V  F  L  L  N  L  I  I  H  I  *  I  S  Q  T  F  *  R  A  C  W  V  M  E  Q  L  K  E  F  C  H  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0167M06.1" strand="+"/>
                <serials PGL_serial="6" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="82031" stop="82066"/>
                    <exon start="82489" stop="82659"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>204</number_coding_nucleotides>
                  <number_encoded_amino_acids>68</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ECERPFSIELYLVGAKDHQRFQASYAILLKARLTALKKRERKDKRKATDSDKKMDISKKKSAAAKAST*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="-" PGL_start="82753" PGL_stop="78131"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="82753" e_stop="82350"/>
            <exon e_start="81915" e_stop="81791"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.774" acc_prob="0.988" e_score="0.985"/>
          <exon-only e_score="0.992"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.985">
            <gDNA_exon_boundary e_start="82753" e_stop="82350" e_length="404"/>
          </exon>
          <intron i_serial="1" don_prob="0.774" acc_prob="0.988">
            <gDNA_intron_boundary i_start="82349" i_stop="81916" i_length="434"/>
          </intron>
          <exon e_serial="2" e_score="0.992">
            <gDNA_exon_boundary e_start="81915" e_stop="81791" e_length="125"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82753" stop="82350"/>
              <exon start="81915" stop="81791"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E297448" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AAGTTTCAGACTTGTCGCCCCAAATGGATGGGGTTCAAATCCTACAACTCTATCCTAGAAACAAAATGGGGGAATAAACCAAAGGACTAAAGTTTCATGTAGAGGCTTTAGCAGCAGCAGATTTCTTTTTCGAAATATCCATCTTTTTGTCAGAATCAGTAGCCTTCCTCTTGTCCTTCCTCTCCCTCTTCTTTAGTGCAGTCAACCGGGCCTTCAGCAAAATTGCATAAGATGCTTGGAAACGCTGGTGATCTTTTGCTCCAACCTGTTAGTTCAATATAATCAAGTGCATCATTAGAGCCACAAGAAGTGAAATGATGCATCAAAACATAAACAACAATTGTATAAACTACATAAGCAACAAGCAAAGACGTGAATACAAATAAGATGACACCACCCATAAG : GTGAGCGAAATTTAGAACAGAAGTGTGCAACATGCAAATGCTGAAAGGGCTAGCTAGCAGACATACCAGACAAAGTTCTATATTAAAGCGACATTTCACATTCTTGTAACATGACCAGATGTTTT</gDNA_template>
            <first_frame> K  F  Q  T  C  R  P  K  W  M  G  F  K  S  Y  N  S  I  L  E  T  K  W  G  N  K  P  K  D  *  S  F  M  *  R  L  *  Q  Q  Q  I  S  F  S  K  Y  P  S  F  C  Q  N  Q  *  P  S  S  C  P  S  S  P  S  S  L  V  Q  S  T  G  P  S  A  K  L  H  K  M  L  G  N  A  G  D  L  L  L  Q  P  V  S  S  I  *  S  S  A  S  L  E  P  Q  E  V  K  *  C  I  K  T  *  T  T  I  V  *  T  T  *  A  T  S  K  D  V  N  T  N  K  M  T  P  P  I  R :   *  A  K  F  R  T  E  V  C  N  M  Q  M  L  K  G  L  A  S  R  H  T  R  Q  S  S  I  L  K  R  H  F  T  F  L  *  H  D  Q  M  F  </first_frame>
            <second_frame>  S  F  R  L  V  A  P  N  G  W  G  S  N  P  T  T  L  S  *  K  Q  N  G  G  I  N  Q  R  T  K  V  S  C  R  G  F  S  S  S  R  F  L  F  R  N  I  H  L  F  V  R  I  S  S  L  P  L  V  L  P  L  P  L  L  *  C  S  Q  P  G  L  Q  Q  N  C  I  R  C  L  E  T  L  V  I  F  C  S  N  L  L  V  Q  Y  N  Q  V  H  H  *  S  H  K  K  *  N  D  A  S  K  H  K  Q  Q  L  Y  K  L  H  K  Q  Q  A  K  T  *  I  Q  I  R  *  H  H  P  *   : G  E  R  N  L  E  Q  K  C  A  T  C  K  C  *  K  G  *  L  A  D  I  P  D  K  V  L  Y  *  S  D  I  S  H  S  C  N  M  T  R  C  F </second_frame>
            <third_frame>   V  S  D  L  S  P  Q  M  D  G  V  Q  I  L  Q  L  Y  P  R  N  K  M  G  E  *  T  K  G  L  K  F  H  V  E  A  L  A  A  A  D  F  F  F  E  I  S  I  F  L  S  E  S  V  A  F  L  L  S  F  L  S  L  F  F  S  A  V  N  R  A  F  S  K  I  A  *  D  A  W  K  R  W  *  S  F  A  P  T  C  *  F  N  I  I  K  C  I  I  R  A  T  R  S  E  M  M  H  Q  N  I  N  N  N  C  I  N  Y  I  S  N  K  Q  R  R  E  Y  K  *  D  D  T  T  H  K  :  V  S  E  I  *  N  R  S  V  Q  H  A  N  A  E  R  A  S  *  Q  T  Y  Q  T  K  F  Y  I  K  A  T  F  H  I  L  V  T  *  P  D  V   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C06HBa0167M06.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="78607" e_stop="78131"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.912"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.912">
            <gDNA_exon_boundary e_start="78607" e_stop="78131" e_length="477"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="78607" stop="78131"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E246710" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CACGAACCGACACGTAGATATAGGGGATCAGAGTGTCACGTACCGACACAAGAGGAATAATGAATATGAGGGATCGGAGTGTCACGTACCGACACAAGAGAATTAAAGATAATGAATCTTGAAAGATGTTAATATACTCAATCTAACGAACATAATTCCCAAATGAGTATGGTGTTGAGGCTTGAGCCCTCATGGATGAACTTGATGGTACTTATTGATGATTATAATACTTGTTGTGGCTACATGTTGAGTTTTATAGTTGATTTACGATAATATTGATATATACTGTTCCCTATTTTGAGTTGGCCGATGATATCTACTCAGTACCCGTGTTTTGTACTGACCCCTACTTTTATGTTTTCTTCTTGTTTATTTGTGGAGTGCAGCAAACGTGCCATCGTCTTCAACTCAACAGTAATTCAAGCCAGTCTTACTACATCGGAAATTCAGGGTGAGCTAATGCTTCTAGCTTGGACT</gDNA_template>
            <first_frame> H  E  P  T  R  R  Y  R  G  S  E  C  H  V  P  T  Q  E  E  *  *  I  *  G  I  G  V  S  R  T  D  T  R  E  L  K  I  M  N  L  E  R  C  *  Y  T  Q  S  N  E  H  N  S  Q  M  S  M  V  L  R  L  E  P  S  W  M  N  L  M  V  L  I  D  D  Y  N  T  C  C  G  Y  M  L  S  F  I  V  D  L  R  *  Y  *  Y  I  L  F  P  I  L  S  W  P  M  I  S  T  Q  Y  P  C  F  V  L  T  P  T  F  M  F  S  S  C  L  F  V  E  C  S  K  R  A  I  V  F  N  S  T  V  I  Q  A  S  L  T  T  S  E  I  Q  G  E  L  M  L  L  A  W  T </first_frame>
            <second_frame>  T  N  R  H  V  D  I  G  D  Q  S  V  T  Y  R  H  K  R  N  N  E  Y  E  G  S  E  C  H  V  P  T  Q  E  N  *  R  *  *  I  L  K  D  V  N  I  L  N  L  T  N  I  I  P  K  *  V  W  C  *  G  L  S  P  H  G  *  T  *  W  Y  L  L  M  I  I  I  L  V  V  A  T  C  *  V  L  *  L  I  Y  D  N  I  D  I  Y  C  S  L  F  *  V  G  R  *  Y  L  L  S  T  R  V  L  Y  *  P  L  L  L  C  F  L  L  V  Y  L  W  S  A  A  N  V  P  S  S  S  T  Q  Q  *  F  K  P  V  L  L  H  R  K  F  R  V  S  *  C  F  *  L  G   </second_frame>
            <third_frame>   R  T  D  T  *  I  *  G  I  R  V  S  R  T  D  T  R  G  I  M  N  M  R  D  R  S  V  T  Y  R  H  K  R  I  K  D  N  E  S  *  K  M  L  I  Y  S  I  *  R  T  *  F  P  N  E  Y  G  V  E  A  *  A  L  M  D  E  L  D  G  T  Y  *  *  L  *  Y  L  L  W  L  H  V  E  F  Y  S  *  F  T  I  I  L  I  Y  T  V  P  Y  F  E  L  A  D  D  I  Y  S  V  P  V  F  C  T  D  P  Y  F  Y  V  F  F  L  F  I  C  G  V  Q  Q  T  C  H  R  L  Q  L  N  S  N  S  S  Q  S  Y  Y  I  G  N  S  G  *  A  N  A  S  S  L  D  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0167M06.1" strand="-"/>
                <serials PGL_serial="7" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="78328" stop="78131"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>198</number_coding_nucleotides>
                  <number_encoded_amino_acids>66</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>YILFPILSWPMISTQYPCFVLTPTFMFSSCLFVECSKRAIVFNSTVIQASLTTSEIQGELMLLAWT</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="82051" e_stop="81868"/>
            <exon e_start="81436" e_stop="81044"/>
            <exon e_start="78221" e_stop="78194"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.803" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.907" acc_prob="0.965" e_score="0.987"/>
          <exon-only e_score="0.893"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="82051" e_stop="81868" e_length="184"/>
          </exon>
          <intron i_serial="1" don_prob="0.803" acc_prob="0.000">
            <gDNA_intron_boundary i_start="81867" i_stop="81437" i_length="431"/>
          </intron>
          <exon e_serial="2" e_score="0.987">
            <gDNA_exon_boundary e_start="81436" e_stop="81044" e_length="393"/>
          </exon>
          <intron i_serial="2" don_prob="0.907" acc_prob="0.965">
            <gDNA_intron_boundary i_start="81043" i_stop="78222" i_length="2822"/>
          </intron>
          <exon e_serial="3" e_score="0.893">
            <gDNA_exon_boundary e_start="78221" e_stop="78194" e_length="28"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82051" stop="81868"/>
              <exon start="81436" stop="81044"/>
              <exon start="78221" stop="78194"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E257644" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="3" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ACTAAAGGGACGTTCACATTCTTAGACACATGACGGGCTGTATCAGCCCATACTTCATGAAATATGTACCATGTGAAAACCTTGTAAATTTCTAAATTTCAAGAAGTAACAAATCAACCAGTATTTGCATGTGCAGGTGAGCGAAATTTAGAACAGAAGTGTGCAACATGCAAATGCTGAAAGG : GCTAGCTAACAGACATACCAGACAAAGTTCTATATTAAAGGGAAGTTCACATTCTTAAAGACACGTGATGGGCCGTGTCAGCCCAAACTTCATGCCATGTGTACCATGTAGAAAACCTTGTCAATTTCTCAATTTCAAGAAGTAACAAATCAAAGGAGTATATGGATGTGCAGGTGAGCTATATTCAGAACAAGTGTGCAACTCGCAAATACTGAAAGGGCTAGCTAGCGGACATACCCAACCAAAGTTCTATATTAAAGCGGCTCTCACATTCTTAGATACATGACGGGCTGTTTCAGCCCAAACTCCATGCCGTGTGTTGTACCATGTGGAAAACCTTGTCAATTTCCCAATTTTAAGAAGTAACAAATCAAAGAGTATTTGCATGTGCAG : CAAACGTGCCATCGTCTTCAACTCAACA</gDNA_template>
            <first_frame> T  K  G  T  F  T  F  L  D  T  *  R  A  V  S  A  H  T  S  *  N  M  Y  H  V  K  T  L  *  I  S  K  F  Q  E  V  T  N  Q  P  V  F  A  C  A  G  E  R  N  L  E  Q  K  C  A  T  C  K  C  *  K   : G  *  L  T  D  I  P  D  K  V  L  Y  *  R  E  V  H  I  L  K  D  T  *  W  A  V  S  A  Q  T  S  C  H  V  Y  H  V  E  N  L  V  N  F  S  I  S  R  S  N  K  S  K  E  Y  M  D  V  Q  V  S  Y  I  Q  N  K  C  A  T  R  K  Y  *  K  G  *  L  A  D  I  P  N  Q  S  S  I  L  K  R  L  S  H  S  *  I  H  D  G  L  F  Q  P  K  L  H  A  V  C  C  T  M  W  K  T  L  S  I  S  Q  F  *  E  V  T  N  Q  R  V  F  A  C  A   : A  N  V  P  S  S  S  T  Q   </first_frame>
            <second_frame>  L  K  G  R  S  H  S  *  T  H  D  G  L  Y  Q  P  I  L  H  E  I  C  T  M  *  K  P  C  K  F  L  N  F  K  K  *  Q  I  N  Q  Y  L  H  V  Q  V  S  E  I  *  N  R  S  V  Q  H  A  N  A  E  R  :  A  S  *  Q  T  Y  Q  T  K  F  Y  I  K  G  K  F  T  F  L  K  T  R  D  G  P  C  Q  P  K  L  H  A  M  C  T  M  *  K  T  L  S  I  S  Q  F  Q  E  V  T  N  Q  R  S  I  W  M  C  R  *  A  I  F  R  T  S  V  Q  L  A  N  T  E  R  A  S  *  R  T  Y  P  T  K  V  L  Y  *  S  G  S  H  I  L  R  Y  M  T  G  C  F  S  P  N  S  M  P  C  V  V  P  C  G  K  P  C  Q  F  P  N  F  K  K  *  Q  I  K  E  Y  L  H  V  Q  :  Q  T  C  H  R  L  Q  L  N  </second_frame>
            <third_frame>   *  R  D  V  H  I  L  R  H  M  T  G  C  I  S  P  Y  F  M  K  Y  V  P  C  E  N  L  V  N  F  *  I  S  R  S  N  K  S  T  S  I  C  M  C  R  *  A  K  F  R  T  E  V  C  N  M  Q  M  L  K  G :   L  A  N  R  H  T  R  Q  S  S  I  L  K  G  S  S  H  S  *  R  H  V  M  G  R  V  S  P  N  F  M  P  C  V  P  C  R  K  P  C  Q  F  L  N  F  K  K  *  Q  I  K  G  V  Y  G  C  A  G  E  L  Y  S  E  Q  V  C  N  S  Q  I  L  K  G  L  A  S  G  H  T  Q  P  K  F  Y  I  K  A  A  L  T  F  L  D  T  *  R  A  V  S  A  Q  T  P  C  R  V  L  Y  H  V  E  N  L  V  N  F  P  I  L  R  S  N  K  S  K  S  I  C  M  C  S :   K  R  A  I  V  F  N  S  T </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C06HBa0167M06.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="+" PGL_start="84544" PGL_stop="85936"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="84544" e_stop="85021"/>
            <exon e_start="85627" e_stop="85936"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.000" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="84544" e_stop="85021" e_length="478"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="85022" i_stop="85626" i_length="605"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="85627" e_stop="85936" e_length="310"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="84544" stop="84896"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E397222" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="84545" stop="84982"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E289693" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="84680" stop="85021"/>
              <exon start="85627" stop="85936"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E322260" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TCAATTTTTTTTTAAAAAAAAATGATAAATTTTTCTTCAAGAATTTTGTTGATTTTGTTATTAACATGTACTATAGCTATAATTATAATTCCAAAATTGGCTTCTACACAATATTGTGGATGTACAGAAGGATTGTGTTGCAGTAGATGGGGTTATTGTGGCAGTGGAAAAGCTTATTGTGGACAAGGTTGTCAAGGAGGGCCTTGTTATAATTCTTCAACCAAAAATTACAATCATAATATTAATAACAATAATAATAATAATACCAATAGAGTTTCTGATATTGTTAGTGAATCATTTTTCAATGGAATTGCAAATCAAGCTGCTTCAAATTGTGAAGGCAAAGGATTTTACACGAGATCTGTATTTCTTGAAGCTTTAAAGTCTTATCCTGAATTCGCAACTATCGGTTTTTCTGATGATGATAATAAGCGCGAAATTGCTGCTTTCTTTGCTCATGTCACACATGAGACCGGAC : AAATGTGTTACATAAATGAGATAAATGGTTCATCTAGGGACTATTGTGACATGACAAACTCAGAGTACCCCTGTGTTTCTGGCCAAAATTATTATGGTAGAGGACCAATACAACTATCATGGAACTTCAACTATGGTCCTGCTGGAAAAGACATCGGATTCGATGGGCTTAACGACCCCGATATTGTGTCTAGAGACAGTTTAATATCATTCAAAACTGCCCTGTGGTACTGGATGAACACTTGCCAACCTCTCTTAAGTTCTGGGCAAGGTTTCGGGGCAACGATTCGAGCTATTAATGGTCCTCTTGA</gDNA_template>
            <first_frame> S  I  F  F  *  K  K  M  I  N  F  S  S  R  I  L  L  I  L  L  L  T  C  T  I  A  I  I  I  I  P  K  L  A  S  T  Q  Y  C  G  C  T  E  G  L  C  C  S  R  W  G  Y  C  G  S  G  K  A  Y  C  G  Q  G  C  Q  G  G  P  C  Y  N  S  S  T  K  N  Y  N  H  N  I  N  N  N  N  N  N  N  T  N  R  V  S  D  I  V  S  E  S  F  F  N  G  I  A  N  Q  A  A  S  N  C  E  G  K  G  F  Y  T  R  S  V  F  L  E  A  L  K  S  Y  P  E  F  A  T  I  G  F  S  D  D  D  N  K  R  E  I  A  A  F  F  A  H  V  T  H  E  T  G   : Q  M  C  Y  I  N  E  I  N  G  S  S  R  D  Y  C  D  M  T  N  S  E  Y  P  C  V  S  G  Q  N  Y  Y  G  R  G  P  I  Q  L  S  W  N  F  N  Y  G  P  A  G  K  D  I  G  F  D  G  L  N  D  P  D  I  V  S  R  D  S  L  I  S  F  K  T  A  L  W  Y  W  M  N  T  C  Q  P  L  L  S  S  G  Q  G  F  G  A  T  I  R  A  I  N  G  P  L   </first_frame>
            <second_frame>  Q  F  F  F  K  K  K  *  *  I  F  L  Q  E  F  C  *  F  C  Y  *  H  V  L  *  L  *  L  *  F  Q  N  W  L  L  H  N  I  V  D  V  Q  K  D  C  V  A  V  D  G  V  I  V  A  V  E  K  L  I  V  D  K  V  V  K  E  G  L  V  I  I  L  Q  P  K  I  T  I  I  I  L  I  T  I  I  I  I  I  P  I  E  F  L  I  L  L  V  N  H  F  S  M  E  L  Q  I  K  L  L  Q  I  V  K  A  K  D  F  T  R  D  L  Y  F  L  K  L  *  S  L  I  L  N  S  Q  L  S  V  F  L  M  M  I  I  S  A  K  L  L  L  S  L  L  M  S  H  M  R  P  D  :  K  C  V  T  *  M  R  *  M  V  H  L  G  T  I  V  T  *  Q  T  Q  S  T  P  V  F  L  A  K  I  I  M  V  E  D  Q  Y  N  Y  H  G  T  S  T  M  V  L  L  E  K  T  S  D  S  M  G  L  T  T  P  I  L  C  L  E  T  V  *  Y  H  S  K  L  P  C  G  T  G  *  T  L  A  N  L  S  *  V  L  G  K  V  S  G  Q  R  F  E  L  L  M  V  L  L  </second_frame>
            <third_frame>   N  F  F  L  K  K  N  D  K  F  F  F  K  N  F  V  D  F  V  I  N  M  Y  Y  S  Y  N  Y  N  S  K  I  G  F  Y  T  I  L  W  M  Y  R  R  I  V  L  Q  *  M  G  L  L  W  Q  W  K  S  L  L  W  T  R  L  S  R  R  A  L  L  *  F  F  N  Q  K  L  Q  S  *  Y  *  *  Q  *  *  *  *  Y  Q  *  S  F  *  Y  C  *  *  I  I  F  Q  W  N  C  K  S  S  C  F  K  L  *  R  Q  R  I  L  H  E  I  C  I  S  *  S  F  K  V  L  S  *  I  R  N  Y  R  F  F  *  *  *  *  *  A  R  N  C  C  F  L  C  S  C  H  T  *  D  R  T :   N  V  L  H  K  *  D  K  W  F  I  *  G  L  L  *  H  D  K  L  R  V  P  L  C  F  W  P  K  L  L  W  *  R  T  N  T  T  I  M  E  L  Q  L  W  S  C  W  K  R  H  R  I  R  W  A  *  R  P  R  Y  C  V  *  R  Q  F  N  I  I  Q  N  C  P  V  V  L  D  E  H  L  P  T  S  L  K  F  W  A  R  F  R  G  N  D  S  S  Y  *  W  S  S  * </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0167M06.1" strand="+"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="84559" stop="85021"/>
                    <exon start="85627" stop="85934"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>771</number_coding_nucleotides>
                  <number_encoded_amino_acids>257</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KKMINFSSRILLILLLTCTIAIIIIPKLASTQYCGCTEGLCCSRWGYCGSGKAYCGQGCQGGPCYNSSTKNYNHNINNNNNNNTNRVSDIVSESFFNGIANQAASNCEGKGFYTRSVFLEALKSYPEFATIGFSDDDNKREIAAFFAHVTHETGQMCYINEINGSSRDYCDMTNSEYPCVSGQNYYGRGPIQLSWNFNYGPAGKDIGFDGLNDPDIVSRDSLISFKTALWYWMNTCQPLLSSGQGFGATIRAINGPL</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 225 chains have been computed
$ 
$ memory statistics:
$ 165128 bytes spliced alignments in total
$ 75 spliced alignments have been stored
$ 2201 bytes was the average size of a spliced alignment
$ 16760 bytes predicted gene locations in total
$ 8 predicted gene locations have been stored
$ 2095 bytes was the average size of a predicted gene location
$ 0 megabytes was the average size of the backtrace matrix
$ 244 backtrace matrices have been allocated
$ 
$ date finished: 2009-01-16 20:38:28
-->
