<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-01-16 20:38:33"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C06HBa0167M06-FMABi/GenomeThreader_SGN_U_tomato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U313457" ref_strand="+" ref_description="SGN-U313457        Tomato 200607 #1 [8 ESTs aligned] arabidopsis/peptide: | Symbol: None | 2-isopropylmalate synthase 1 (IMS1), identical to 2-isopropylmalate synthase (IMS1) (Arabidopsis thaliana) GI:12330687; identical to cDNA 2-isopropylmalate synthase (IMS1) GI:12330686 | chr1:27845832-27849437 FORWARD | Aliases: F2P9.9, F2P9_9(evalue: 0, score=869) genbank/nr: 2-isopropylmalate(evalue: 0, score=1136)">
      <seq>tctcttacttgaattttcagtctcttctcccagccgccattaaaaccagcactcgcaaactccaatttctcttctccggcaatggcgtctatcaccgcaaatcatccaatctccggtaaaccattaatctcattccgtcccaaaaaccctttacttcaaacccaaactctcttcaatttcaaaccatcaatctccaagcactccaattcttcattttccattcccgttgtccgctgctcaatccgccgtagaccggaatatactccgagtcacattcccgatccaaactatgtccggatattcgacaccactctccgtgatggcgaacaatcaccaggggctacaatgactacaaaggagaaactggatgttgcacgtcagttagctaagcttggtgttgatataattgaggctggttttcctgcttcttctgaagctgatcttgaagctgtgaaattgatagctaaggaagttgggaatggtgtttatgaagagggatatgttccggttatttgtggattggcgaggtgtaataagaaggatattgataaggcgtgggaggctgtgaagtatgctaagaaaccgaggattcatacgtttattgctacaagtgagatacatatgaattataagctgaaaatgagtagagatcaagttgttgagaaagctaggagtatggtggcttatgcaaggagtattgggtgtgaggatgttgaatttagccctgaagatgctggaagatctgatccggagtttctttatcatatcttgggagaggttatcaaagctggggcaacaacccttaacatccctgatactgttggatacactgtacccgaagaatttggacaattgattgctaaaataaaagcgaataccccaggagttgaagatgtgatcatttcaacacactgccagaacgatcttgggctttctactgccaacaccttagctggagcatgtgcaggtgcaagacaattggaagtgaccatcaatggaattggtgaaagagctggaaatgcttctttagaggaggttgtaatggccttaaagtgtcgtggagagcaagtactaggtggcctatatacagggattaatacacaacatatactcatgtcaagcaagatggtagaggagtattccggacttcatgtgcagccacacaaagccattgttggagctaatgcctttgctcatgaaagtggcatccatcaggatggaatgttaaaacacaaagatacatatgagattatatctcctgaagatattgggcttaatcgtgctaatgaatctggtattgtccttgggaaactcagtgggcgtcatgctttgcaagccaaaatgcttgagcttggatacgagattgagggcaaagaacttgatgacctgttctggcgattcaaatctgtggctgagaagaaaaagaaaattacagatgatgacctggtagcactgatgtcagatgaggttttccagcctcaatttgtgtggcaacttcaaaatgtacaggttacttctggaagtcttggcctttctacagcaactgttaagctcattgatgctgatggtcgagagcatatttcttgttctgttggaacggggccagttgacgcggcttataaggcagttgatctcattgttaaggtacctgtaacactccttgagtattccatgaatgcagtcacacaaggtatagatgctatagcttcaaccagagtcttaattcgtggagaaaatggccatacatcaacccatgccgtaactggagagactattcaccgtacatttagtggaaccggagcagatatggatattgtcatctccagtgtccgagcctatgttggtgcattgaataagatgatgagtttcagaaaactaatggcgaaaaataacaaacccgaaagcagtgcagtcgtataggtacttctgtgcaaatcaaggttatggaacttttgcaactgcactggagctttatcatttgtacaaaatgtaggagtctgttcaaagaatttgagcctgtagttttcaagaaaacaaagcttaatatgtctggtagtgcttgaaaatcatctaagtttatggtgtatcagttggaacattagacacattgtccatataactttgttcatgctcccgtttaactaatttatgaatctacataccacgcaagattttcgaaatgatttcagaaattatgagattttctgtattaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0167M06.1" temp_strand="-" temp_description="C06HBa0167M06.1  AC211057.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0167M06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="35128" stop="24616"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34828" g_stop="34089" g_length="740"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="740" r_length="740" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="34088" i_stop="33112" i_length="977">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="33111" g_stop="32898" g_length="214"/>
          <reference_exon_boundary r_type="cDNA" r_start="741" r_stop="954" r_length="214" r_score="0.986"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="32897" i_stop="32817" i_length="81">
            <donor d_prob="0.928" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="32816" g_stop="32736" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="955" r_stop="1035" r_length="81" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="32735" i_stop="32231" i_length="505">
            <donor d_prob="0.903" d_score="1.00"/>
            <acceptor a_prob="0.768" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="32230" g_stop="32138" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="1036" r_stop="1128" r_length="93" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="32137" i_stop="32053" i_length="85">
            <donor d_prob="0.851" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="32052" g_stop="31966" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="1129" r_stop="1215" r_length="87" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="31965" i_stop="29182" i_length="2784">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.988" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="29181" g_stop="29081" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="1216" r_stop="1316" r_length="101" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="29080" i_stop="28616" i_length="465">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="28615" g_stop="28582" g_length="34"/>
          <reference_exon_boundary r_type="cDNA" r_start="1317" r_stop="1350" r_length="34" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="28581" i_stop="28505" i_length="77">
            <donor d_prob="0.989" d_score="0.00"/>
            <acceptor a_prob="0.668" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="28504" g_stop="28430" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="1351" r_stop="1425" r_length="75" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="28429" i_stop="27686" i_length="744">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.924" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="27685" g_stop="27602" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="1426" r_stop="1509" r_length="84" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="27601" i_stop="27504" i_length="98">
            <donor d_prob="0.957" d_score="1.00"/>
            <acceptor a_prob="0.667" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="27503" g_stop="27369" g_length="135"/>
          <reference_exon_boundary r_type="cDNA" r_start="1510" r_stop="1644" r_length="135" r_score="1.000"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="27368" i_stop="26067" i_length="1302">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="26066" g_stop="25921" g_length="146"/>
          <reference_exon_boundary r_type="cDNA" r_start="1645" r_stop="1790" r_length="146" r_score="1.000"/>
        </exon>
        <intron i_serial="11">
          <gDNA_intron_boundary i_start="25920" i_stop="25339" i_length="582">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.979" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="12">
          <gDNA_exon_boundary g_start="25338" g_stop="24923" g_length="416"/>
          <reference_exon_boundary r_type="cDNA" r_start="1791" r_stop="2206" r_length="416" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="2212" polyA_stop="2228"/>
      <MATCH_line gen_id="C06HBa0167M06.1" gen_strand="-" ref_id="SGN-U313457" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>2206</cumulative_length_of_scored_exons>
        <coverage percentage="0.990" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0167M06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U313457" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34828" e_stop="34089"/>
          <exon e_start="33111" e_stop="32898"/>
          <exon e_start="32816" e_stop="32736"/>
          <exon e_start="32230" e_stop="32138"/>
          <exon e_start="32052" e_stop="31966"/>
          <exon e_start="29181" e_stop="29081"/>
          <exon e_start="28615" e_stop="28582"/>
          <exon e_start="28504" e_stop="28430"/>
          <exon e_start="27685" e_stop="27602"/>
          <exon e_start="27503" e_stop="27369"/>
          <exon e_start="26066" e_stop="25921"/>
          <exon e_start="25338" e_stop="24923"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTCTTACTTGAATTTTCAGTCTCTTCTCCCAGCCGCCATTAAAACCAGCACTCGCAAACTCCAATTTCTCTTCTCCGGCAATGGCGTCTATCACCGCAAATCATCCAATCTCCGGTAAACCATTAATCTCATTCCGTCCCAAAAACCCTTTACTTCAAACCCAAACTCTCTTCAATTTCAAACCATCAATCTCCAAGCACTCCAATTCTTCATTTTCCATTCCCGTTGTCCGCTGCTCAATCCGCCGTAGACCGGAATATACTCCGAGTCACATTCCCGATCCAAACTATGTCCGGATATTCGACACCACTCTCCGTGATGGCGAACAATCACCAGGGGCTACAATGACTACAAAGGAGAAACTGGATGTTGCACGTCAGTTAGCTAAGCTTGGTGTTGATATAATTGAGGCTGGTTTTCCTGCTTCTTCTGAAGCTGATCTTGAAGCTGTGAAATTGATAGCTAAGGAAGTTGGGAATGGTGTTTATGAAGAGGGATATGTTCCGGTTATTTGTGGATTGGCGAGGTGTAATAAGAAGGATATTGATAAGGCGTGGGAGGCTGTGAAGTATGCTAAGAAACCGAGGATTCATACGTTTATTGCTACAAGTGAGATACATATGAATTATAAGCTGAAAATGAGTAGAGATCAAGTTGTTGAGAAAGCTAGGAGTATGGTGGCTTATGCAAGGAGTATTGGGTGTGAGGATGTTGAATTTAGCCCTGAAGATGCTGGAAGGTTTGGACTTTTACGCCTACACATTAAAAACTTCCAAAATTTCATTTCTATACATTTTTACAACTTTCAAAAATGTAAAGTTATTCAAAATTTGAACTTTGATGTGTTGACTGGACTCTTTACCATCACTTTGCTATTTTTTCATTTTCAGTAGTTTAATATAAAATTGATAATATAATATTTATGTTAATTAGCATCTAAACTTTTCGTTCTCCCATCACATAGCATTATATACTTGCTTTGAGCTATCATCATTGATAGAATTGTTGATTCTGGGACTTTTTCTTCTTGAATGGAGATAATTATTGAGTTTAGGCTAGCTATCCACAAAGTTGCCAATGGGGGACTAAGGAATAGATTGGACTTATTTCCTTGTTTCTTTTTTGGATTAATCATGCTCGTTATGGTCTTATATGTTGAACTGATAGTTGTATGCAGATAGTGTTATATAAATTCAGATGTTTATTTAAAAGTGTCTCGTAATTTAGCTGGCGAATGATCCTGAAAAATCCTGAAAAGTTTCTGGAGAAAATTTCATCAAGAGTCTGTTAACACCAAACTTGTCTTATTAAACAGACATGTTTATGGCATTCTTTTTAACAAGCGCATGGGAGACCTTGAAATTATGACTCTTTTCCCTTTCAACCGAACACTTAAAAGATAATAAGACCTTGTGTACTGTAATTTGCCTTTTCCTATCAAGAAGTTCTTTGGTATGATGCTTTGAGATCTCAAAGAAGAGGGTTAAACTACCATGTTTTATTCTGTTGCCATGTATAAAAGTTTGTAGACTAGCTCAGTGATTAGAATCGACAATGGGAACCACTTTCATGCATTGTGCTAACTGGGATCTGTTCTTTTTGCTGATCTGAGCCTTGTTTTCCTGTTTATTTGCACTACCTCCTTGGTACTAGCTTTAATAATATTAATTTACTTTATGAAAAAAAAAAAACTTATTTCCTGTTTTTTCCTCTCAGATCTGATCCAGAGTTTCTTTATCATATCCTTGGAGAGGTTATCAAAGCTGGGGCAACAACCCTTAACATCCCTGATACTGTTGGATACACTGTACCCGAAGAATTTGGACAATTGATTGCTAAAATAAAAGCGAATACCCCAGGAGTTGAAGATGTGATCATTTCAACACACTGCCAGAACGATCTTGGGCTTTCTACTGCCAACACCTTAGCTGTATGTGGTTCAATGTTGATGAGAACCTAGATGTTTATGCCATCTTAAGTTGTATGCACATTAAAGCGTGTCCAATTTCAGGGAGCATGTGCAGGTGCAAGACAATTGGAAGTGACCATCAATGGAATTGGTGAAAGAGCTGGAAATGCTTCTTTAGAGGAGGTGTGTGAGGGCTTTCCGCTGAGAAATTTCAGTTCTCTTATGTGCATGATTTGGGCTCCAAAATTTGAGGGGTGGAATCACTAATTAAACAACCTTGACTATAAGTTCCCCTCTGTTCTTTCCTTGAAAAAAAGTTAGGTCTTCAAAGAAATTTCCCATAATTGCGTAAGGCATTCTCCACACAAAAGGAACTATTCCACCTCTTCCTAGAGTAAATTAACATCTTTAATTTAGACTGAATGACTGATACTAGAGTAGAAGTTGTGTGGTATGTAATATTATTCTTTTGCAAAACAATAGTTGCAAACATGCAACCGTATTTTGCCATTTTGGTCTTTGGAGCCAATTTCTGCCATTGGTTGTGTTATGTGCTGTTTAAACTGACAAACTACTGACGTTCATGAGACTCCTTTTTCCTCTGTGGTACTTGTTTGTCTTTGGTTTTCATCTTGGGCATGTCGGGCCTTCATTTTCTAACCTTTTACCATGTCCAATGCCGGAATAGGTTGTAATGGCCTTAAAGTGTCGTGGAGAGCAAGTACTAGGTGGCCTATATACAGGGATTAATACACAACATATACTCATGTCAAGCAAGATGGTTTGTACCCCTACTATCTCATAGTATGGTGATCTTTTACTGGTTAATATTCTTCCAATATGCATTCTGACCCTTTATCGTGCAGGTAGAGGAGTATTCCGGACTTCATGTGCAGCCACACAAAGCCATTGTTGGAGCTAATGCCTTTGCTCATGAAAGTGGCATCCATCAGGTTTGTGTAATTTGCTCTCGTTTATTGTTGAAAGAAACAATTCCTGAAAGAGGCAAATCTTCTTACCAGTTTATGGACATCTTTTCTTTTCAACGATCAACCAAATTACTGATGGAATGGTGTTCCAAGTTCCCTGATTTACTTCCCCAGACCTCATAGATTTCAGCTTAACAGCAGCTCTTCTGTAGTCCTGAGAAAGAGACTCTAGCTCTATGAGTTGAAGGAGCAATGAAGAAATAAATGGTTGAGTCGTCACTTTGCTTTCAACGAAGGCAAACCAAATACATATATTGAAACCCCTTTTCTGAAGATTTTCATGTTTAGGGCGAGGTTCTTTTGTCATCAACCAAGCAAAACAATCGAACTTTCAGAGGTTCCCTATTTTCCCAAATGCATTTCCAAGGCCAATTTTCAATGACAGCGGGATTTATCCCTGATAACAGGATTTGACCGTGAAAATTCCGTTAAGATCATATTTTCACTTTAGAGAATCAGACCGGAGTTGAAGGGTGGGGGGTGGTTCTATGGCGTCTGAGAAGCAAAAAGCACAGTTATCCAATTCCCAATCATTAATATTGAGCATGAATCTGATGTTCCAGCCTTTTTCACTCCTGTAATCTGACAGAGATGCTTCAGAATTTGGCGCCATAGTGAATAATGTTGGGTACTGGTTTTTGGAGGTTATTGCACAAGTCACATATCTATCCAAGACCTTACTTTCCAGCCATTTTCAATTACAGTTGAGGTCTTGGATAGAAAGAGTCCTACTGTGCACTCATATGCCTCCATACACCACATGAATTAGGAAAATTTGGATGTTTCGTAATCCATGGGTTGGAAAGTCTGTATTTAGCCGTAATAACATCTCTCCATAAAGCTCCCTCCTCCCTATTAAATCTCTAGAGCCGTTTGTGTTGCAAGAAAATACTATGAACCCTCAGATATTTGTTCCCCATGCCCCCAGCCTTCTTGTCAGTAGAAACCGTATCCCTTTTTGAAAGACTTGTTTTGTCTATTCCCTTGTCACAGAAAATCCCTTTACACACTATTGATTAGTACTAGCCTACCTTCCAATGAGTGATGTTATGATAACTTCCTTTTTGCACTTTTCCTCCCATCCCAGATTGTAGTGGCTTGAGACTTTGACCCCAAAGGAAGGCTGAAAGCCTAATTGTTTAATGGGAAAAGAGCCTACTCCACAACTCAAGGTGTCAGCTATTTCCTATAAGTTGATCATTTCGTTCACAGGACAAAAAACACTCTTTGTATAATTAACTTGAAGACCATAATTCGCTTTGAAGAACAAAGTACCATATGAAGTTGTACAATCTGATCATTTCAGTTTTGCAAAAAAAATAAAATAAAAAAATAGAGTGAATCATCTGCATAGAAAAGGCAAGTAAGATGCAGTTTTCCTTGATTTCTCAGACTTGGGTTAAAGCCTTTTATCTTGTCATGTAGTTTTGCTGTTGACAACATTCTTCTTAGACATAACATATCCAAGATAAACAGAAAAGGAGAAAGCGAATCTTCTTGTCTAAAACCTTTTGGTGAAGCAAAAAAGTCTTTAGGTGATCCATTTATGATAATGGATGACATGACAATGGAGATGCAAAATTGGATCCACTTGATTTATTTATTGCCGGAGCTCATGAATTTTAATATGTTGACAAGGATAGGGTGGCAATGGGGCAGGTCATGGGCGGGGCTGGGCAGGGTAAAGAATTAACTTGGCAGGGTGGGGCAATATTTAAATGGGGCAGGGCAGGACAGGTCATAGCTAATATTTTTTTAAAATTTTAATAGTGCAGGGCAGGTGTGAGTTCATGAGAGGTTCCTTAGTGTTTTGAACACTGTAGCTTGCTAGCAATGCTTAGGTTGAATCCCGAAGGAAGTTTTCCGATGTTTCTGAGCATATAATTATCCTTTATTCGGGTTATTTGATTAACAAAAAATTTAAGAATTCATTTGCGTTTTGAACACTGTAGCTTTTTACTTATATTTAACCAGTTTATCACTTTGTGTTATTTAAAAGTTAAACAGAACATTAAAAAGTGGGAAAAATAAATTAACACTTAAATGGGGCAGGGCGGGCAAAATGTTGGAAAATTCTAGGCAGAGCAGGGTAGGGCGGGTTAAATTCTTAACGGGTCAAGGCTTGCTCAGCGCTAGCCATCCCTATCGCCATCCCTGGATAAGGGATTCCAATGAACGTTGTCAAAGACTTTCTCGCTCACAGCTTAACGTGAGACGTTTAAGATAAACTGAGAAGCCTCAAAGACCCAACAAACAATTAGAAGTTGCTCCAAGTTTTCCTTCTTGGGGCATTAGATTATAATAAACATTTGGTACCAATATTCCAGGAGGTGCAGAGATATTATACCTACTGACGTAAAAGAACTTCCATCAGGAGTTTGAATCTGCTTACTCTTTTATATTTCTGATTATTCATTTGTTTATGGCCCTTCTCATTTTAGATGTGTAGTTACTGATCTTATATTTGAATATCTATGGATAAATCTTCCACATATTTAGTTAGAGCTCGATTAATTGTCCTGTTAGCATTTGTTTTTGATTCATCTTCAAATGCATAAAGTTTTTCAGTTAAACTTCTTTGAATATATGTAGTATATTATGTCTCTCCTCCCGTTTCTTCCTTACCTCAAAGCTGGATTCGCACCTTTTTGTAACCGTTCAGTTGTGAATCAAAAAAAAAAGGAAAAAATATTTCAGTTTTTCCTTTTCAATCTCTTCTCCTTCTTAAACTACTTTTATGCTCTTTAGGATGGAATGTTAAAACACAAAGATACATATGAGATTATATCTCCTGAAGATATTGGGCTTAATCGTGCTAATGAATCTGGTATTGTCCTTGGGAAACTCAGGTATGTGATTTACCAATCAATGCTTATTGCTGTGATAGCTTAAGTGTTAGATTTCTGCGCTGTTTGAGTTTTTAGTTTTTATCCCTTGATTATTGAACTTGCTTAGCAAAGTACATTCTTTTAGTTGCTATGAGGTTAGTATTTCTTTAGTACTTGAGTAAGGCTTCCCTGATCCATAGACACTCACACAGTTGCTGTTTCAAATAGTGAATCATACCTTTGTTGTTTTAAAACAGTGTGGAGGTATATAGGAACTTCCTCTCTTCTATGGAGAGGTAAAGTAGAAGCTTATTGAGTTTGCCTCACTTTAATATGGTCAGAGCCACAATTGCATGAAATAATTATCATCACAGTCTGTAACTTAATCCCTCTCGTGCCCTCCTTCCTAACCTGCTCTATTCATTATTTACATTGAATTACATCATGTCTTCAAGGAAATTGATACGTTGAACATTTTTTTTGTAGTGGGCGTCATGCTTTGCAAGCCAAAATGCTTGAGGTAAATTGCATGCTCTGAGAATTTTGTTTATTTCTTAAATTTAAGAGCACGAGACAAATCGTTTTAGTCCTATGCAGCTTGGATACGAGATTGAGGGCAAAGAACTTGATGACCTGTTCTGGCGATTCAAATCTGTGGCTGAGAAGAAAAAGGTGAATTAAGATTTTGAAATTTCCACTGTTGTTTGGTATATTTACGTCATCATTCAAATGCATTTGGAGTGGTGGAGTTTAGTAAATTTGCTACATTGAAAATTCATGGAAGGGGATTGATGGCTGGAACATTTTCTCCTTTCTAGGTAACCTAGTGACTAGAACATGAGCTAAAAATATAGTTACGATCTCTCTCTCTCTCTCTCCCTTTTCACATTCAGTAAATCTTAAGTACGTCACATCTTCAAATTTTGTGAATTTTAGTGTCTTTATTCATCTATGTATCTGGGTTGTACATTAATTTTTGTGGAGTAGGAAACAACTGGTGTGTAAGAACTTCTAAGATATTGTGAAGTGAGATGAACTAAAGTATCAGAAAAGGTGGAAGTGAGAGTAGAAACAGATAAAGAAAATTGAGCATGAATGCGAATGGAAAGATTGGGCAGAGTTCAGGATACCTTCTGAACCAAGATAATCTGTCCTATTATTACTGGTATATTATAAAGTATAAACTACAGCTTTTCTCAAGGTGGGGAAACTGTCAAATTTGTGCTAAGACCCTTTAAACCTTCTTTTGGTTGTCAAAGTTTCCTCTGCTCATTTGAAAGGGTTATTTGGCTAATTATACTTTTATCAGTTAAATTATAATTAAAATTAAGGTTAAGAACTGTGTGGATCTCATATGATATTGGTATCGTGGACATATTTTTTGGCCATCTATTTATCTCCACGCTGCTATTTCAGAAAATTACAGATGATGACCTGGTAGCACTGATGTCAGATGAGGTTTTCCAGCCTCAATTTGTGTGGCAACTTCAAAATGTACAGGTAGATATTAATGTTGACTATATCTGCACTGTTTTAACTTTGATCTGGATTAAAAAGGATGGTTCAGCTGATTGAAAGACTTCCTGCTCTATGGACAGGTTACTTCTGGAAGTCTTGGCCTTTCTACAGCAACTGTTAAGCTCATTGATGCTGATGGTCGAGAGCATATTTCTTGTTCTGTTGGAACGGGGCCAGTTGACGCGGCTTATAAGGCAGTTGATCTCATTGTTAAGGTATGAAATAGAAATGAAACTCCTAATAATAAATAATCTTGTCACAGTGCTAGGACCCATGTTGATTGCAAGCCGATCAGTATGTTATATTCAACTATAAATGGTTAATTACAAACTCATTTGGTGAATCTCTTTTATGCAAATCGTATTCATAATTATACATATACTAATATTATTTTTCCCCAGGCTATAGATGCATCAAGTTTGAGTTCTGTTGAGCAAAATATTTGGAAGCTCGTGATTTTTGATATATTGTCTTGTTGTGTCCTCTTACCTGTACTTTTTCCTCCGTCATATGTACTACATATAAAGTTGTCTTAGGGTGCACCAAGGTATGGACTAATGGTAAAAGAAGTGGGTTTAGAACTATGAGGTCTCGGGTTCAAATTCCTCAGAGACAAAACAAATAGGTGATTTCTTCTCATCTGTCCTAGCCTTAGTGGACAGATTACCTCATACCTATCCCGTGGAATTAGTCGAGTTGTCTGAAAGCTGGTCCAGACACCACGGTTATCCAAAAATAAAAGTTACCTTAGGGTCAATTGTTCTTTTGTACAACAGTATTCTTGCTGTTGAAGAAGTCGGGTCAACCCAAGTATATGTTGTACTTAAAAACTAAGAGCCTGTTTGGATTCACTTGAAAGTTGGTCAAACCTACTTTTAAGTCATTTTTAGTTTTGGGGATTGTTTGACATGGTTAAAAATAAGTTTAAAATGACCCAATCCAAACGGGCTCTAAGACTACATAATAAACCTCATGTGGAGTCCTATTCTAAAGCTAGTCCAAACCTAACCCAGCATCTAGTGCTGTATTCAATGATGACATCAGCAGACAACCCAAATCCTACATAACAAATGCAATTTTGCTATAATGTGCTGGGAAGATATTGCCGAGAATCTATTGGAAATAACCTCTCAACCTTTACAAGGCAGGGGCAAGGCTACGTACACACCACCCTCCCCAGACCCCACTTGTTTACACTGGGTGTGTTGTTGTACTGCGAAGATATCTTTTAAGAGCAGTTTTATCATTTTCCATATAATTGATGGACCTACTAGCTTTATAATAACTTCCCAAAAATAATTAAAACTATATTTGATATGCATTTTGAGTAGGAATTTTTACATTTTGAATTTGACTTACAAGCAGTTTTCTATATATCTTGAGAGAACCCAACTTTTTTGTTCGAGAAGATGGTGTTTGCCTCTAAATCAGCAGTCAAACTTGTCTCTATTTAATAATCTCTTTGGTTTAATGTGTATTATGGTCTGGTAATTCTAGTGTTCATGCATTTTGTGCAGGTACCTGTAACACTCCTTGAGTATTCCATGAATGCAGTCACACAAGGTATAGATGCTATAGCTTCAACCAGAGTCTTAATTCGTGGAGAAAATGGCCATACATCAACCCATGCCGTAACTGGAGAGACTATTCACCGTACATTTAGGTATGAAATGTACCAGCCATGTTGTTTGCATTTATTCTTCTTTCGCTGATAGAACCTAGGGAACATGGAGAGAGAGGGAGGGGGGCATGTAGGTGTTGACACAGTAAATTTTAGAATTGGCGACATGACATCAATGAGCCAAATTTATATGTTTTCAATAAAGCATAACCACAGTAGTCACAAGATTCATGTTTACTCTCCCCTTCTCTTCACCATTCTTCTATAATGCAGCCTTCACCCAACAAAAGATCAACTTCCAGGCCTCTTGCTTATTTTCTCCATTGACTGCCCTCACCCTTTGTGTTTCCTCATCACTGCAACCCCTCACATGACTGCTCCCAACTGTTACTCTCGTGCCTCCAAGTTCTTTCTTCAATCTCCCATTTTTCCATTAGACTTGTCCAAAAGAAACACCAGTGTTAGTGTGTGTATCAAGTAGAAGAGTCAAAATCCGTAGTAGATATGCTTGGCTGGATGTCAATCATGTGTTCAACGTCACTTTTTTCTGGGGCAAGTCTGTGAAATATCACCTTTCATTTCTCTCATTAGAAAAGGCTTTTTATATCTTCTATCTTCTTCCAGTGGAACCGGAGCAGATATGGATATTGTCATCTCCAGTGTCCGAGCCTATGTTGGTGCATTGAATAAGATGATGAGTTTCAGAAAACTAATGGCGAAAAATAACAAACCCGAAAGCAGTGCAGTCGTATAGGTACTTCTGTGCAAATCAAGGTTATGGAACTTTTGCAACTGCACTGGAGCTTTATCATTTGTACAAAATGTAGGAGTCTGTTCAAAGAATTTGAGCCTGTAGTTTTCAAGAAAACAAAGCTTAATATGTCTGGTAGTGCTTGAAAATCATCTAAGTTTATGGTGTATCAGTTGGAACATTAGACACATTGTCCATATAACTTTGTTCATGCTCCCGTTTAACTAATTTATGAATCTACATACCACGCAAGATTTTCGAAATGATTTCAGAAATTATGAAAATCTCT</genome_strand>
        <mrna_strand>TCTCTTACTTGAATTTTCAGTCTCTTCTCCCAGCCGCCATTAAAACCAGCACTCGCAAACTCCAATTTCTCTTCTCCGGCAATGGCGTCTATCACCGCAAATCATCCAATCTCCGGTAAACCATTAATCTCATTCCGTCCCAAAAACCCTTTACTTCAAACCCAAACTCTCTTCAATTTCAAACCATCAATCTCCAAGCACTCCAATTCTTCATTTTCCATTCCCGTTGTCCGCTGCTCAATCCGCCGTAGACCGGAATATACTCCGAGTCACATTCCCGATCCAAACTATGTCCGGATATTCGACACCACTCTCCGTGATGGCGAACAATCACCAGGGGCTACAATGACTACAAAGGAGAAACTGGATGTTGCACGTCAGTTAGCTAAGCTTGGTGTTGATATAATTGAGGCTGGTTTTCCTGCTTCTTCTGAAGCTGATCTTGAAGCTGTGAAATTGATAGCTAAGGAAGTTGGGAATGGTGTTTATGAAGAGGGATATGTTCCGGTTATTTGTGGATTGGCGAGGTGTAATAAGAAGGATATTGATAAGGCGTGGGAGGCTGTGAAGTATGCTAAGAAACCGAGGATTCATACGTTTATTGCTACAAGTGAGATACATATGAATTATAAGCTGAAAATGAGTAGAGATCAAGTTGTTGAGAAAGCTAGGAGTATGGTGGCTTATGCAAGGAGTATTGGGTGTGAGGATGTTGAATTTAGCCCTGAAGATGCTGGAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTGATCCGGAGTTTCTTTATCATATCTTGGGAGAGGTTATCAAAGCTGGGGCAACAACCCTTAACATCCCTGATACTGTTGGATACACTGTACCCGAAGAATTTGGACAATTGATTGCTAAAATAAAAGCGAATACCCCAGGAGTTGAAGATGTGATCATTTCAACACACTGCCAGAACGATCTTGGGCTTTCTACTGCCAACACCTTAGCT.................................................................................GGAGCATGTGCAGGTGCAAGACAATTGGAAGTGACCATCAATGGAATTGGTGAAAGAGCTGGAAATGCTTCTTTAGAGGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTAATGGCCTTAAAGTGTCGTGGAGAGCAAGTACTAGGTGGCCTATATACAGGGATTAATACACAACATATACTCATGTCAAGCAAGATG.....................................................................................GTAGAGGAGTATTCCGGACTTCATGTGCAGCCACACAAAGCCATTGTTGGAGCTAATGCCTTTGCTCATGAAAGTGGCATCCATCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGGAATGTTAAAACACAAAGATACATATGAGATTATATCTCCTGAAGATATTGGGCTTAATCGTGCTAATGAATCTGGTATTGTCCTTGGGAAACTCAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGCGTCATGCTTTGCAAGCCAAAATGCTTGAG.............................................................................CTTGGATACGAGATTGAGGGCAAAGAACTTGATGACCTGTTCTGGCGATTCAAATCTGTGGCTGAGAAGAAAAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAATTACAGATGATGACCTGGTAGCACTGATGTCAGATGAGGTTTTCCAGCCTCAATTTGTGTGGCAACTTCAAAATGTACAG..................................................................................................GTTACTTCTGGAAGTCTTGGCCTTTCTACAGCAACTGTTAAGCTCATTGATGCTGATGGTCGAGAGCATATTTCTTGTTCTGTTGGAACGGGGCCAGTTGACGCGGCTTATAAGGCAGTTGATCTCATTGTTAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACCTGTAACACTCCTTGAGTATTCCATGAATGCAGTCACACAAGGTATAGATGCTATAGCTTCAACCAGAGTCTTAATTCGTGGAGAAAATGGCCATACATCAACCCATGCCGTAACTGGAGAGACTATTCACCGTACATTTAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGAACCGGAGCAGATATGGATATTGTCATCTCCAGTGTCCGAGCCTATGTTGGTGCATTGAATAAGATGATGAGTTTCAGAAAACTAATGGCGAAAAATAACAAACCCGAAAGCAGTGCAGTCGTATAGGTACTTCTGTGCAAATCAAGGTTATGGAACTTTTGCAACTGCACTGGAGCTTTATCATTTGTACAAAATGTAGGAGTCTGTTCAAAGAATTTGAGCCTGTAGTTTTCAAGAAAACAAAGCTTAATATGTCTGGTAGTGCTTGAAAATCATCTAAGTTTATGGTGTATCAGTTGGAACATTAGACACATTGTCCATATAACTTTGTTCATGCTCCCGTTTAACTAATTTATGAATCTACATACCACGCAAGATTTTCGAAATGATTTCAGAAATTATGAGATTTTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U313458" ref_strand="+" ref_description="SGN-U313458        Tomato 200607 #1 [2 ESTs aligned] genbank/nr: 2-isopropylmalate(evalue: 2e-08, score=60.8)">
      <seq>agtgtccgagcctatgttggtgcattgaataaaatgatgagtttcagaaaactaatggcgaaaaataacaaaccccaaagcagtgcagtcgtataggtacttctgtgcaaatcaaggttatggaacttttgcaactgccctggagctttatcatttgtacaaaatgtaggagtctgttcaaagaatttgagcctgtagttttcaagaaaacaaagcttaatatgtctggtagtgcttgaaaatcatctaagtttatggtgtatcagttggaacattagacacattgtccatataactttgttcatgctcccgtttaactaatttatgaatctacataccacgcaagattttcgaaatgatttcagaaattatgaaaatctctgtattaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0167M06.1" temp_strand="-" temp_description="C06HBa0167M06.1  AC211057.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0167M06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="25604" stop="24616"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="25304" g_stop="24923" g_length="382"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="382" r_length="382" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="388" polyA_stop="404"/>
      <MATCH_line gen_id="C06HBa0167M06.1" gen_strand="-" ref_id="SGN-U313458" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>382</cumulative_length_of_scored_exons>
        <coverage percentage="0.946" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0167M06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U313458" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="25304" e_stop="24923"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTGTCCGAGCCTATGTTGGTGCATTGAATAAGATGATGAGTTTCAGAAAACTAATGGCGAAAAATAACAAACCCGAAAGCAGTGCAGTCGTATAGGTACTTCTGTGCAAATCAAGGTTATGGAACTTTTGCAACTGCACTGGAGCTTTATCATTTGTACAAAATGTAGGAGTCTGTTCAAAGAATTTGAGCCTGTAGTTTTCAAGAAAACAAAGCTTAATATGTCTGGTAGTGCTTGAAAATCATCTAAGTTTATGGTGTATCAGTTGGAACATTAGACACATTGTCCATATAACTTTGTTCATGCTCCCGTTTAACTAATTTATGAATCTACATACCACGCAAGATTTTCGAAATGATTTCAGAAATTATGAAAATCTCT</genome_strand>
        <mrna_strand>AGTGTCCGAGCCTATGTTGGTGCATTGAATAAAATGATGAGTTTCAGAAAACTAATGGCGAAAAATAACAAACCCCAAAGCAGTGCAGTCGTATAGGTACTTCTGTGCAAATCAAGGTTATGGAACTTTTGCAACTGCCCTGGAGCTTTATCATTTGTACAAAATGTAGGAGTCTGTTCAAAGAATTTGAGCCTGTAGTTTTCAAGAAAACAAAGCTTAATATGTCTGGTAGTGCTTGAAAATCATCTAAGTTTATGGTGTATCAGTTGGAACATTAGACACATTGTCCATATAACTTTGTTCATGCTCCCGTTTAACTAATTTATGAATCTACATACCACGCAAGATTTTCGAAATGATTTCAGAAATTATGAAAATCTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U320128" ref_strand="+" ref_description="SGN-U320128        Tomato 200607 #1 [12 ESTs aligned] arabidopsis/peptide: | Symbol: None | rhomboid family protein, contains Pfam profile PF01694: Rhomboid family | chr3:22002803-22004240 FORWARD | Aliases: T16L24.70(evalue: 1e-119, score=427) genbank/nr: gi|15231701|ref|NP_191511.1| hypothetical protein [Arabidopsis thaliana] gi|11358060|pir||T49293 hypothetical protein T16L24.70 - Arabidopsis thaliana gi|6996288|emb|CAB75449.1| putative protein [Arabidopsis thaliana](evalue: 1e-117, score=427)">
      <seq>gagtcccgacaagagcccacaattgtaatttttgcatttgcttgcgtatgtcactccagaggagcctcgactcttcttcacaagcgaaacaactaaaacccctctttctaattacattgattttctagcaacatttcctcaagaaatctgtaagtattcatacattcaattttgcttgtttttagatttggggtaccatcaaattctctaaatttattgaaatttgatagcttgattgatcttcgtacaaagtattcttagttgtattggatctgaataggattgcaatcaagaaattctgaagttgggtttgctgatttgggtctttatgtgatttgacgttcaataaattagtctgaagtgcaagattcttgattttctgatttggggttttctatatctgtttcaagattcaatttttctgaggattctgtattgaatttgattaatgacattacaagaaggttaaataaaggggaggaagtagtgtatttgtaagcattttagcaataaagttgaagaaggaattgtgagtaactgagggggttaaaggtttcttcacatggggaaaccattgttttatgagatattggagaagccagcaaccagttgtgcaattggaatatgtagtgcaatttggttttatattcagaagtcaaatattggttattcacatgttggtttgagttatgaaactgctttggagggtcattattggaggataataacatcagcactttcacatattagtgtgcttcatcttgttttcaatatgagtgcactttggagtcttggagttgttgaacaattggggcatttaggtcttggtgtgcagtattatcttcattatacactggtgttggttgttctttcgggcatgcttgtcatcggaatgtaccatatcttgattcagaaatttaagctagagtattttcggagagttactgctgttggatattcttgtgtggtgtttggttggatgacgattctttcggtcaagcaaccgtcgtcaaagttgaatctttttggttttctttcacttccgatcagctttgcgccatttgagtcgctcatattcacttccattattgttcctcaagcgagttttattggacatttatcgggaattattgttggttatgctgttggttggggtttgatacatgggatgaacaattactgggcagttacaatgctgggatggactgtgcttgtgtttgttttcagtttgaaaaagtctggtacatttgatttgaactttcttgagattgaacctgtcacggatccctctctgccttcggtacgttttttcgcagctggaactggtagaagtttacagatgagtacgttaccagatgctggtgcagatattgtatagcttttggaagatttcattgcttacttggggatcatgacgtaattctagtattagcattttgctggatgacttgttgattatgcatacttacctccaaaaccatcatttacctggtgatacattcattggttctcgaaaacctgtttgttaattgaaccaactttttaggtaaccactgtcatttataactgtggtgcgaaaagttgttattacattttatatgatatagatgaaccatgatgtattccacttaacactaaatttttgtgattgctttaaccctttgtgtcctatctatgcattataaatgatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0167M06.1" temp_strand="+" temp_description="C06HBa0167M06.1  AC211057.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0167M06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="52478" stop="54766"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="52777" g_stop="54466" g_length="1690"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="1691" r_length="1691" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0167M06.1" gen_strand="+" ref_id="SGN-U320128" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>1690</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0167M06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U320128" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="52777" e_stop="54466"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAGTCCCGACAAGAGACCACAATTGTAATTTTTGCATTTGCTTGCGTATGTCACTCCAGAGGAGCCTCGACTCTTCTTCACAAGCGAAACAACTAAAACCCCTCTTTCTAATTACATTGATTTTCTAGCAACATTTCCTCAAGAAATCTGTAAGTATTCATACATTCAATTTTGCTTGTTTTTAGATTTGGGGTACCATCAAATTCTCTAAATTTATTGAAATTTGATAGCTTGATTGATCTTCGTACAAAGTATTCTTAGTTGTATTGGATCTGAATAGGATTGCAATCAAGAAATTCTGAAGTTGGGTTTGCTGATTTGGGTCTTTATGTGATTTGACGTTCAATAAATTAGTCTGAAGTGCAAGATTCTTGATTTTCTGATTTGGGGTTTTCTATATCTGTTTCAAGATTCAATTTTTCTGAGGATTCTGTATTGAATTTGATTAATGACATTACAAGAAGGTTAAATAAAGGGGAGGAAGTAGTGTATTTGTAAGCATTTTAGCAATAAAGTTGAAGAAGGAATTGTGAGTAACTGAGGGGGTTAAAGGTTTCTTCACATGGGGAAACCATTGTTTTATGAGATATTGGAGAAGCCAGCAACCAGTTGTGCAATTGGAATATGTAGTGCAATTTGGTTTTATATTCAGAAGTCAAATATTGGTTATTCACATGTTGGTTTGAGTTATGAAACTGCTTTGGAGGGTCATTATTGGAGGATAATAACATCAGCACTTTCACATATTAGTGTGCTTCATCTTGTTTTCAATATGAGTGCACTTTGGAGTCTTGGAGTTGTTGAACAATTGGGGCATTTAGGTCTTGGTGTGCAGTATTATCTTCATTATACACTGGTGTTGGTTGTTCTTTCGGGCATGCTTGTCATCGGAATGTACCATATCTTGATTCAGAAATTTAAGCTAGAGTATTTTCGGAGAGTTACTGCTGTTGGATATTCTTGTGTGGTGTTTGGTTGGATGACGATTCTTTCGGTCAAGCAACCGTCGTCAAAGTTGAATCTTTTTGGTTTTCTTTCACTTCCGATCAGCTTTGCGCCATTTGAGTCGCTCATATTCACTTCCATTATTGTTCCTCAAGCGAGTTTTATTGGACATTTATCGGGAATTATTGTTGGTTATGCTGTTGGTTGGGGTTTGATACATGGGATGAACAATTACTGGGCAGTTACAATGCTGGGATGGACTGTGCTTGTGTTTGTTTTCAGTTTGAAAAAGTCTGGTACATTTGATTTGAACTTTCTTGAGATTGAACCTGTCACGGATCCCTCTCTGCCTTCGGTACGTTTTTTCGCAGCTGGAACTGGTAGAAGTTTACAGATGAGTACGTTACCAGATGCTGGTGCAGATATTGTATAGCTTTTGGAAGATTTCATTGCTTACTTGGGGATCATGACGTAATTCTAGTATTAGCATTTTGCTGGATGACTTGTTGATTATGCATACTTACCTCCAAAACCATCATTTACCTGGTGATACATTCATTGGTTCTCGAAAACCTGTTTGTTAATTGAACCAACTTTTTAGGTAACCACTGTCATTTATAACTGTGGTGCGAAAAGTTGTTATTACATTTTATATGATATAGATGAACCATGATGTATTCCACTTAACACTAAATTTTTGTGATTGCTTT-AGCCTTTGTGTCCTATCTATGCATTATAAATGATT</genome_strand>
        <mrna_strand>GAGTCCCGACAAGAGCCCACAATTGTAATTTTTGCATTTGCTTGCGTATGTCACTCCAGAGGAGCCTCGACTCTTCTTCACAAGCGAAACAACTAAAACCCCTCTTTCTAATTACATTGATTTTCTAGCAACATTTCCTCAAGAAATCTGTAAGTATTCATACATTCAATTTTGCTTGTTTTTAGATTTGGGGTACCATCAAATTCTCTAAATTTATTGAAATTTGATAGCTTGATTGATCTTCGTACAAAGTATTCTTAGTTGTATTGGATCTGAATAGGATTGCAATCAAGAAATTCTGAAGTTGGGTTTGCTGATTTGGGTCTTTATGTGATTTGACGTTCAATAAATTAGTCTGAAGTGCAAGATTCTTGATTTTCTGATTTGGGGTTTTCTATATCTGTTTCAAGATTCAATTTTTCTGAGGATTCTGTATTGAATTTGATTAATGACATTACAAGAAGGTTAAATAAAGGGGAGGAAGTAGTGTATTTGTAAGCATTTTAGCAATAAAGTTGAAGAAGGAATTGTGAGTAACTGAGGGGGTTAAAGGTTTCTTCACATGGGGAAACCATTGTTTTATGAGATATTGGAGAAGCCAGCAACCAGTTGTGCAATTGGAATATGTAGTGCAATTTGGTTTTATATTCAGAAGTCAAATATTGGTTATTCACATGTTGGTTTGAGTTATGAAACTGCTTTGGAGGGTCATTATTGGAGGATAATAACATCAGCACTTTCACATATTAGTGTGCTTCATCTTGTTTTCAATATGAGTGCACTTTGGAGTCTTGGAGTTGTTGAACAATTGGGGCATTTAGGTCTTGGTGTGCAGTATTATCTTCATTATACACTGGTGTTGGTTGTTCTTTCGGGCATGCTTGTCATCGGAATGTACCATATCTTGATTCAGAAATTTAAGCTAGAGTATTTTCGGAGAGTTACTGCTGTTGGATATTCTTGTGTGGTGTTTGGTTGGATGACGATTCTTTCGGTCAAGCAACCGTCGTCAAAGTTGAATCTTTTTGGTTTTCTTTCACTTCCGATCAGCTTTGCGCCATTTGAGTCGCTCATATTCACTTCCATTATTGTTCCTCAAGCGAGTTTTATTGGACATTTATCGGGAATTATTGTTGGTTATGCTGTTGGTTGGGGTTTGATACATGGGATGAACAATTACTGGGCAGTTACAATGCTGGGATGGACTGTGCTTGTGTTTGTTTTCAGTTTGAAAAAGTCTGGTACATTTGATTTGAACTTTCTTGAGATTGAACCTGTCACGGATCCCTCTCTGCCTTCGGTACGTTTTTTCGCAGCTGGAACTGGTAGAAGTTTACAGATGAGTACGTTACCAGATGCTGGTGCAGATATTGTATAGCTTTTGGAAGATTTCATTGCTTACTTGGGGATCATGACGTAATTCTAGTATTAGCATTTTGCTGGATGACTTGTTGATTATGCATACTTACCTCCAAAACCATCATTTACCTGGTGATACATTCATTGGTTCTCGAAAACCTGTTTGTTAATTGAACCAACTTTTTAGGTAACCACTGTCATTTATAACTGTGGTGCGAAAAGTTGTTATTACATTTTATATGATATAGATGAACCATGATGTATTCCACTTAACACTAAATTTTTGTGATTGCTTTAACCCTTTGTGTCCTATCTATGCATTATAAATGATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U331588" ref_strand="+" ref_description="SGN-U331588        Tomato 200607 #1 [2 ESTs aligned] arabidopsis/peptide: | Symbol: None | expressed protein | chr1:1830604-1832552 REVERSE | Aliases: T21E18.10, T21E18_10(evalue: 1e-108, score=390) genbank/nr: gi|50941215|ref|XP_480135.1| unknown protein [Oryza sativa (japonica cultivar-group)] >gi|37806244|dbj|BAC99761.1| unknown protein [Oryza sativa (japonica cultivar-group)] (evalue: 2e-110, score=402)">
      <seq>aacaagacctgatcaaactctgttcgagattgttttcattgcatatggccaatcttgatggagataacgaacctgaatggataaagagggtgaaatcagaaggttccattccctttctggacccagataattgctcaaacggttgggcttctccaccagggaatagtttcatggtaagaggtccagaatacttttcaacaaaggttaaagttcccggtggtgaatttcttctgaaacctcttggttttgactggataaaaggtcctaaaaagatttctgatattctaaataatccaaaacaccgtatcaggatggctcttcaagatgaaactccaactggttgcaagccctttatttgggctttcaacttgcaagttcctagtaaggaaaatttcagtgctgttgtatattttgtgggcctcgaacccgtccctgaagggtctttgatggagcagttcttgaaaggagatgatgcatttagaactaaaaggttaaaattgattgcgaatattgttaaaggaccttggattgtaagaaaggcagttggggagcaagctatatgcgtaattggccgtgcactgacttgcaagtactctatagcagacgatttcatagaggtagatgttgatataggatcttcggtgatagcaaatgcgattgttcatctcgcgtataattatatatcaactcttactgttgatttagccttccttatcgagagtcaaactcaatcagaacttccagaacggattttaggagcggtaagattttcggagctgcagaccagttcagcaacactagttgaaatgccatccaatgggaacatgggagagttccttccttctttcccttcaaggttatggaagtcatttggaaacagtttctcccaccttgttcaggcagatactcaagatggtagctccagctccagcccctcacttgtaaaggaggttgttgataatggtctctttgaagaaggtaccaaaaaatgatctccacactgtaaatatgatgcatttttgaaacgttcaatggctccaggctcggagaattttattattgcggtttcatattgttggttgtgatggctacattcaccgctatttatagctgtagaaattacgtactacaaaaatatgtatacatttttggggagcgatttagcgacatggaactccagtagcatttttcactattagcctctgctcatcttttcatttctttttgaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0167M06.1" temp_strand="-" temp_description="C06HBa0167M06.1  AC211057.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0167M06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="61890" stop="56229"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="61590" g_stop="61563" g_length="28"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="28" r_length="28" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="61562" i_stop="59072" i_length="2491">
            <donor d_prob="1.000" d_score="0.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="59071" g_stop="58109" g_length="963"/>
          <reference_exon_boundary r_type="cDNA" r_start="29" r_stop="991" r_length="963" r_score="0.999"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="58108" i_stop="56779" i_length="1330">
            <donor d_prob="0.997" d_score="0.98"/>
            <acceptor a_prob="0.998" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="56778" g_stop="56528" g_length="251"/>
          <reference_exon_boundary r_type="cDNA" r_start="992" r_stop="1242" r_length="251" r_score="0.964"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0167M06.1" gen_strand="-" ref_id="SGN-U331588" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>1242</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0167M06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U331588" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="61590" e_stop="61563"/>
          <exon e_start="59071" e_stop="58109"/>
          <exon e_start="56778" e_stop="56528"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACAAGACCTGATCAAACTCTGTTCGAGGTATGTTTTTTTTTTCTCTTCAATTTCATCAGTTCATACTTCTCGTAGAATTATTTGTACAAATCGTTTCTACTTTCTTGGATTGTGGATATTTTTTAATATAATTCTGAAACATGACAGGAGAAGTGGGGTTTTACTTTTTTTTTTTACAAAATTTAATGGCAGAATTCGACAAAAAAAAATGTATTAGGTTTCCTGGAAATTGAGTGTTATGATCGAACTAATAAAACTAATCAACTGGAACTCAACAATTTTGGGGCAATTTTCTTAGGTTTATATTAAGCAAAAACTGAACTTTATGAGGAAGTAGAAACTACTGATACCAAATGGAAATAACTGAACTTAGAACAGCTGAGTGAGAACTGAGGAAGGTGAGAAAAATGTCAAATTGAGTTTATGCATTTCTTTCCCTTTCTGGGAATTAGTTATAGGATGCTCACATGCAATCACGAACTTCTTAACTTATTAAATCTCGTGTGTACACGTGTTATAATTCTATTAGCTTATTTATTCATGTCATTAGGTTGAGATACTTGGATTCTTTTAAGTTATGGGAGTGTTGGTTCGTAAGCAAAACAAATATCATCCTAAAAGCATTTGTATATAATCTACCCATACTATGGGAGGTAGGGGTGGGAGGGTAATGGAGATGGGAGCTTAGGGGGTGATGTGAAGATGAGGTGTGTTGGAGGGTAAGAAGGACACGATCAATGTAGTAATGCTACTTGTGGAATTTGTTTGTTTTCCAACAGTTTTGACTCCTCGCCCCTCGGTACCAAATACACCTTATGTTATAGCTTTAACTATAGTATGCAAGCCATCTTATTTCCTTTACCTATGTAATCTATTTGCATTTTTGGGATTCGAACGAACTTAATCTTACAATGGCTGTAGATACTGATATTGAACACAGACATGTTTAAAGAATATGACCATTAAATAATGTAAGACTTATATTTTCAAGGGGAAGTATCTGTAATATCCTTAAATCTCTGCCCCAACCGCAAGCTCTCTCAATTGTGGTGCTTGTTGAATTTTCACTAGTTCCATTCTGAGAAGTATGTTACTGAAAATGTAAATTTGATTCCTGTTGGATAAAGTTTCAAAATGAGTTCCTGTCTTTCTTGTAATGAACAAGACAAAAAGTTGACGACATCAGGGATAGGGTGTTAGGAACTCCCAGTAAGTCGACCATCCTAGAAAAACGAATTCATCTCAGGTTCACATGTTTCCTAAATGGCTTAGATTTTTCAAGTTAAGTTGAGATAGTAGTAGCTTATAGATTATGATCAGATAAGATGGTTTTAGGTTTTGATCACATTATTCCATTTTTTTCCTGATAAGATTATGCACTTGATAATATGATGTATTAGGAAAGTTTAGGCTTGTGTTCCAGTTGCCTTTTTGCTTTATTTTTATTTAAATTCGCATGAATGTTTTTCAATTACGGAAAACTTGGTCCTATAGTTTCCGTTAGTAAAGAGAATCAATTTCCATCACAAAATCACTTCAGGGAATAAAATTGCAGTAAGATAACTAGATAAGTGAGTCCAAATCTGGCTACTTTACTAGGCGTATATACAAGTATTAAATTTTAGTAGGGCAACTTTGAAGAGCACCTTTTGTATTGAACTATTTTTAAATGGAAAGGAACACCTTGTAATAGACTGCAATTCTCCTAGACTGCAAATAGCATGCAACTGAGATAGTAACAAATATTGAAGGCAGGTGGCAGCCTTCAATATTCCCAATGCAGCTTAAGTATGTTAAAGAATATGCAGAATGCAGTTTGACAGTGAAACCTCCTAGTGTCTTTTCCTATCAAGATTGAGAGGGATAAAGATCGGATGACTTAATGAAAGACTAATATATAGAAATTTTAACATATTTTAAAGCATGACTGTTATGGAAATGAACTGGCAATAATATAGTAGTTAAAACTAGATAGAGCTAACTCAGATCTAGTATCCATTATGGTAAAGAAGTTAAAGGAGGACACTACTTGGTTCCGGAAAGAAAGAGTGATTTCATCAGATTGATGTTAGCCTATGAGTTAATGAGACTGTAGATACTATTATGGTTTGTTACTGTATTTGTTAATTAACTTTAAAAAATACTATTATGGTTGGAAAATAGCGTAGAATCACTGGATATCTCATAAGTTGAGACTTTATGGCTAGACAACATACCCGTTGTTTTTTCATTTTTTATTCCTGATAGTTAGACTTATCTGTTAATATTTTCAAGCTTTTTAGATTTATTATCGAGAACTGGTAAGTTTGAGGGGAGCTAATCTCTCGTACACTCTACCCTCCCCAGGCCCCACTTTGTGGGATTTCACTGGGTATGTTGTTGAGGGGAGCTGATCTGCAGTAGTTTTACATTCTAATAAATTTGAAGTAATGTTTTTAGTATATCCGTTCTGATTTATTTCAGAAACAACATCTGGTAATAAAATCCTTTGATTTTAATCTAAGTTGGTGTCCTACAGATTGTTTTCATTGCATATGGCCAATCTTGATGGAGATAACGAACCTGAATGGATAAAGAGGGTGAAATCAGAAGGTTCCATTCCCTTTCTGGACCCAGATAATTGCTCAAACGGTTGGGCTTCTCCACCAGGGAATAGTTTCATGGTAAGAGGTCCAGAATACTTTTCAACAAAGGTTAAAGTTCCCGGTGGTGAATTTCTTCTGAAACCTCTTGGTTTTGACTGGATAAAAGGTCCTAAAAAGATTTCTGATATTCTAAATAATCCAAAACACCGTATCAGGATGGCTCTTCAAGATGAAACTCCAACTGGTTGCAAGCCCTTTATTTGGGCTTTCAACTTGCAAGTTCCTAGTAAGGAAAATTTCAGTGCTGTTGTATATTTTGTGGGCCTCGAACCCGTCCCTGAAGGGTCTTTGATGGAGCAGTTCTTGAAAGGAGATGATGCATTTAGAACTAAAAGGTTAAAATTGATTGCGAATATTGTTAAAGGACCTTGGATTGTAAGAAAGGCAGTTGGGGAGCAAGCTATATGCGTAATTGGCCGTGCACTGACTTGCAAGTACTCTATAGCAGACGATTTCATAGAGGTAGATGTTGATATAGGATCTTCGGTGATAGCAAATGCGATTGTTCATCTCGCGTATAATTATATATCAACTCTTACTGTTGATTTAGCCTTCCTTATCGAGAGTCAAACTCAATCAGAACTTCCAGAACGGATTTTAGGAGCGGTAAGATTTTCGGAGCTGCAGACCAGTTCAGCAACACTAGTTGAAATGCCATCCAATGGGAACATGGGAGAGTTCCTTCCTTCTTTCCCTTCAAGGTTATGGAAGTCATTTGGAAACAGTTTCTCCCACCTTGTTCAGGCAGATACTCAAGATGGTAGCTCCAGCTCCAGCCCCTCACTTGTAAAGGAGGTTGTTGATAATGGTCTCTCTGAAGAAGGTACCAAAAAATGGTAAGTGATCTTAGAATTTAAGAGGACATCATCAAATGCATGACATAATGAAAGAAACTTGAATTTTCCTTCTGTTAGTTTCACTTCTTCCCTGTTTAAGTATGACTGCATTTTTTACTTTATATAAACACTTACCATGGTAAAATGAGTATTTTTTTCTATTGCTAAGCATGACAACTACGAAAGTTTGGCTCATCCTCATTTGATCCAAAAATTGCAAAACCCTGTTTCATGGTTGGACTTCTAAGTTCTTCATTAAAAAAAGGGTTAAACTTCTGAGTTCATGCTTTATTTGACTTTATACCCTAAAGGCGCAACCTCCTTAACCTCCTATCTAAGGTCATGTCTTCGAGAAGCTGAAGCAGGACCCAATTTTCCAAGGACATGACCTTAGATAGGAGGTTATGGAGGTTGTGATTAGGGTAGAAGGTTGGTAGGTAGTTGAGCGCTGTCTCGTTTCCTAGCTGGAGGACAGGCTTGGTGGTAGGTTGGTGCATTGGACCTGTTCCCCTATTTATAGTAGTAGCACTTTTCTCGTAGTTGCATGTCTTACGACTTTTGTTACTCCATATCATTTATTGTGCTTCAGTTATCACATTAGTTGGTTAATGTTATTGCTCCTCTTTAGAATGTTATGGTATGTTCTCCCTATTATTTTTTATATCCTTTTCACTTCTTATTTTTCTTTTAACTGCTCTGATGTTCATTACTCGTGACGAGGGAAGATGATATCCACTTTACCGGTCCACAGAATGCATCAAATCATTTGAGATTCTTCCCTCATATATAGTGCCAATGGTTGTAATGACTGTCTCATCTCATGTTCGCAAATGACTCCTAAATCCGAAGAATATAAACAATGAGCTTAATAGCCAAGTATATCTACTTGGCATTTCTACCTATTTCCTTCACGTATCAAGTCTCTCGTCCAGTAGTCTAGTATAACATCCTCAGGAAACGTTATAATTTGCCAAATCTTTCTCAGAAACATTTACATTTACTCATTGCTTAAACAAAAAACATGAAATTCGTGTGTAGGTGCTAGTGTGCTGTTCTTGTTTTTCAATTTCCAATGAAGACACATCGTCAATATCCATGGAATATGTCCCTTGCGCTCTCCTTATTCTTCATTAGATGGTTCTCTCTCTTTTTTTTCTTCGTTGGACGTTTCAGATGAAATTGTTATACTCATGTTATATGCATTAAAGATATTTTTTTTTCTAATTTTCTAATAGCTTTAATGAATCTTTATATCTTCGTTTCCTCTCTGCATTCTGAAATTGAGTTTTCGTAGTAAACTGAACTTCTCTTAATCATTTGAACTTTGCAGATCTCCACACTGTAAATATGATGCATTTCTGAAACGTTCAATGGCTCCAGGCTCGGAGAATTCTATTATTGCGGTCTCATATTGTTGGTTGTGATGGCTACATTCACCGCTATTTATAGCTGTAGAAATTACGTACTACAAAAATATGTATACATTTCTGGGGAGCGATTTAGCGACATGGAACTCCAGTAGCATTCTTCACTATTAGCCTCTGCTCATCTTCTCATTTCTTTCTGAAAAAGAAAAAAAAT</genome_strand>
        <mrna_strand>AACAAGACCTGATCAAACTCTGTTCGAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGTTTTCATTGCATATGGCCAATCTTGATGGAGATAACGAACCTGAATGGATAAAGAGGGTGAAATCAGAAGGTTCCATTCCCTTTCTGGACCCAGATAATTGCTCAAACGGTTGGGCTTCTCCACCAGGGAATAGTTTCATGGTAAGAGGTCCAGAATACTTTTCAACAAAGGTTAAAGTTCCCGGTGGTGAATTTCTTCTGAAACCTCTTGGTTTTGACTGGATAAAAGGTCCTAAAAAGATTTCTGATATTCTAAATAATCCAAAACACCGTATCAGGATGGCTCTTCAAGATGAAACTCCAACTGGTTGCAAGCCCTTTATTTGGGCTTTCAACTTGCAAGTTCCTAGTAAGGAAAATTTCAGTGCTGTTGTATATTTTGTGGGCCTCGAACCCGTCCCTGAAGGGTCTTTGATGGAGCAGTTCTTGAAAGGAGATGATGCATTTAGAACTAAAAGGTTAAAATTGATTGCGAATATTGTTAAAGGACCTTGGATTGTAAGAAAGGCAGTTGGGGAGCAAGCTATATGCGTAATTGGCCGTGCACTGACTTGCAAGTACTCTATAGCAGACGATTTCATAGAGGTAGATGTTGATATAGGATCTTCGGTGATAGCAAATGCGATTGTTCATCTCGCGTATAATTATATATCAACTCTTACTGTTGATTTAGCCTTCCTTATCGAGAGTCAAACTCAATCAGAACTTCCAGAACGGATTTTAGGAGCGGTAAGATTTTCGGAGCTGCAGACCAGTTCAGCAACACTAGTTGAAATGCCATCCAATGGGAACATGGGAGAGTTCCTTCCTTCTTTCCCTTCAAGGTTATGGAAGTCATTTGGAAACAGTTTCTCCCACCTTGTTCAGGCAGATACTCAAGATGGTAGCTCCAGCTCCAGCCCCTCACTTGTAAAGGAGGTTGTTGATAATGGTCTCTTTGAAGAAGGTACCAAAAAATG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTCCACACTGTAAATATGATGCATTTTTGAAACGTTCAATGGCTCCAGGCTCGGAGAATTTTATTATTGCGGTTTCATATTGTTGGTTGTGATGGCTACATTCACCGCTATTTATAGCTGTAGAAATTACGTACTACAAAAATATGTATACATTTTTGGGGAGCGATTTAGCGACATGGAACTCCAGTAGCATTTTTCACTATTAGCCTCTGCTCATCTTTTCATTTCTTTTTGAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U320645" ref_strand="+" ref_description="SGN-U320645        Tomato 200607 #1 [10 ESTs aligned] arabidopsis/peptide: | Symbol: None | bZIP transcription factor, putative (bZIP69), similar to transcriptional activator RF2a GB:AF005492 GI:2253277 from (Oryza sativa); contains Pfam profile PF00170: bZIP transcription factor | chr1:1834828-1837647 REVERSE | Aliases: T21E18.12, T21E18_12(evalue: 6e-104, score=375) genbank/nr: gi|15221391|ref|NP_172097.1| bZIP protein [Arabidopsis thaliana] gi|25406894|pir||H86195 hypothetical protein [imported] - Arabidopsis thaliana gi|8810469|gb|AAF80130.1| Contains similarity to a b-Zip binding protein from Arabidopsis thaliana gb|Z86093 and contains a b-Zip transcription factor PF|00170 domain.  ESTs gb|AV551499, gb|T04752, gb|AV550784, gb|AV550336, gb|AV545846, gb|AV538486, gb|AV542369, gb|AV538179 come from this gene gi|17065886|emb|CAD12037.1| AtbZIP transcription factor [Arabidopsis thaliana](evalue: 5e-102, score=375)">
      <seq>ggtcctccctgtccgaatttatagtgtttccattctcacacagatttgcctctttgtttatcgtctctcttctccacaagcttttcccttttctctctcgcatgtgataaagctgcttccttctgcttctgcttcccttttcacattttcccttctctgcagatctaatttcaaagctaatcgaaaccgaaaccgtagggaattgatctgggataagcttggttggtgtttgcggaatctacagggtctcagcaaggggtttcatgttctgaggaaaagcaacttggattgtgattttatggttttcctgctataatgttcttgctttgaccggggaaaagtatcattacttgttgatttttggttttctgttggtacggttcttgttggagtatatatatatgtgtgggatgttgggtttgttcctgtgctgttaacatttggaatttgaagggttggggttttttctgtttggatttggagggtttgtatggataaggataagtcttcttcaagccatataggaggttcgttgcctccatcagggagatactcattattttcacctcccggtagtagctccaatgtaaagtcagaacaacctggattagcaaatttacctcccttaggacctggaaatgcttcagaatcaggtcattttggtcatggtttgtcggcagattcaagcctgtttagtcttgatataagccgaatgtctgataacccaccaagaaaatttggtcataggcgtgcccactcagaaattcttactcttcctgatgatattagctttgatagtgatcttggcgttgttggactagatggaccgtctctgtcagatgagactgaggaggacatcttgtcaatgtaccttgacatggataagttcaattcttcaactctgtcttctgaattccaagtgggtgagtcttcttcagctgctccaggttcatcacaaacaacagcaatggcttcaggaacaaataaatttgctcctactgttagtgagaagccaagagttagacatcagcatagccagtccatggatggttcaactacaatcaagccagagatgctcatgtcaggagtggaagagccttcttcagctgaaactaagaaagccacgtcagctgcaaagcttgctgaacttgctcttattgatcctaaacgtgccaagcggatttgggccaacaggcagtcagctgcaagatcaaaggaaaggaaaatgagatatatagcagagcttgagagaaaagttcagactctgcaaacggaagcaactactttatctactcagttgaccctattgcagagagatacaaacggcctgaatgctgaaaacagtgaacttaaactgcgtttacaaacaatggaacaacaggttcacttgcaagatgcgttgaatgatgctttaaaggaggagatacagcatctgaaagtgctaactgggcaaggcatagcaaatggtggacctatgatgaacttcccagcaacctttggaggcaatcagcagttctactctaacaaccaggcaatgcatacattgttggctgcacaacaacttcaacagctccagctacattctcataagcaacaacaccagtttcagcaacatcagctacaccagtttcagcagcaacagttgcagcaccaacaacagcaacagcaacctcttatgcagcagcagcagcagcaggatcaactttcacaagccggagatgtgatgtcaagaggttctctgtcatctcctcaaaatgaaaatgcttctgatggtagttctgtagcaaaggattgaacagctgatggccagagagacaggagttggtgtatgttttaaaaaatatcatgtgttttcccatctagcagctcatttttgtgtttcaaaatcatcacgtgttaaaacaacatctagctcaggttcttgctttcagttagctccttcatctgcattttagtactttgtagggtcatttgacttttagttgaaattgttcaaatcccattctacgcatgtcattttgtcaactatcaacatgattttcttcatgttaccaatattgttggtggtagtttttttggacatcaatcacttatatctctctcacactgttcagtgttcacatttttcgaataatgttttgtggcaatgtctccaactctgcgcgatcgtggagggtaaaattctcatggtgctcctcaataggtaggacttaccagtggcggatccagagcttaaactatggggttcaaggaactccataacttttatctaggcctttaaatgtattcgttaaatatttgatcgtgaacttagttaaatattgtaaaccccaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0167M06.1" temp_strand="-" temp_description="C06HBa0167M06.1  AC211057.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0167M06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="72362" stop="63945"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="72139" g_stop="71949" g_length="191"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="190" r_length="190" r_score="0.982"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="71948" i_stop="71734" i_length="215">
            <donor d_prob="0.998" d_score="0.96"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="71733" g_stop="71728" g_length="6"/>
          <reference_exon_boundary r_type="cDNA" r_start="191" r_stop="196" r_length="6" r_score="0.500"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="71727" i_stop="71675" i_length="53">
            <donor d_prob="0.900" d_score="0.00"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="71674" g_stop="71600" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="197" r_stop="271" r_length="75" r_score="0.987"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="71599" i_stop="71531" i_length="69">
            <donor d_prob="0.000" d_score="0.98"/>
            <acceptor a_prob="0.391" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="71530" g_stop="70623" g_length="908"/>
          <reference_exon_boundary r_type="cDNA" r_start="272" r_stop="1179" r_length="908" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="70622" i_stop="66699" i_length="3924">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="66698" g_stop="66566" g_length="133"/>
          <reference_exon_boundary r_type="cDNA" r_start="1180" r_stop="1312" r_length="133" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="66565" i_stop="66313" i_length="253">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="66312" g_stop="66228" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="1313" r_stop="1397" r_length="85" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="66227" i_stop="65174" i_length="1054">
            <donor d_prob="0.867" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="65173" g_stop="64247" g_length="927"/>
          <reference_exon_boundary r_type="cDNA" r_start="1398" r_stop="2332" r_length="935" r_score="0.954"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="64246" i_stop="64177" i_length="70">
            <donor d_prob="0.000" d_score="0.96"/>
            <acceptor a_prob="0.962" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="64176" g_stop="64166" g_length="11"/>
          <reference_exon_boundary r_type="cDNA" r_start="2333" r_stop="2343" r_length="11" r_score="0.636"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0167M06.1" gen_strand="-" ref_id="SGN-U320645" ref_strand="+">
        <total_alignment_score>0.979</total_alignment_score>
        <cumulative_length_of_scored_exons>2336</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0167M06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U320645" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="72139" e_stop="71949"/>
          <exon e_start="71733" e_stop="71728"/>
          <exon e_start="71674" e_stop="71600"/>
          <exon e_start="71530" e_stop="70623"/>
          <exon e_start="66698" e_stop="66566"/>
          <exon e_start="66312" e_stop="66228"/>
          <exon e_start="65173" e_stop="64247"/>
          <exon e_start="64176" e_stop="64166"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAGCTTTTCCCTTTTCTCTCTCGCATGTGATAAAGCTGCTTCCTTCTGCTTCTGCTTCCCTTTTCACATTTTTCCCTTCTCTGCAGATCTAATTTCAAAGCTAATCGAAACCGTGTAAGAATTTGCCCCTTTTCTATTCCATTATTTTAATGCATTGTTTTTCATTTTCTTTATCACCCATCTCCTTGATTTGTTGCCCTGTACTTCTGTTTTTGTCTGTGTGTGTTAAATTGAGAAATGGGTTTTGAATTTCTTTGATTTTTGAATGCTGGGTTTGTATTTTTTTTCTTGAATCTTTGTTGTATAGAGTTTCTGTTTATCAGAATTCCATCTTTGTATCATTAAGTTTTGTGGGTTTTGTTCATTTTTTTGTTTTTTTTATTTTCAGAGGGAATTGATCTGGGATAAGCTTGTTTGGTGTTTGCGGAATCTACAGGGTCTCAGCAAGGGGTTTCATGTTCTGGTATAGCTAACTTTTGTTAAAGTAATTCGGTTTCGGTGGAATTTGAATACCCCATGATTTTAAATGCAGAGGAAAAGCAACTTGGATTGTGATTTTATGGTTTTCCTGCTATAATGTTCTTGCTTTGACCGGGGAAAAGTATCATTACTTGTTGATTTTTGGTTTTCTGTTGGTACGGTTCTTGTTGGAGTATATATATATGTGTGGGATGTTGGGTTTGTTCCTGTGCTGTTAACATTTGGAATTTGAAGGGTTGGGGTTTTTTCTGTTTGGATTTGGAGGGTTTGTATGGATAAGGATAAGTCTTCTTCAAGCCATATAGGAGGTTCGTTGCCTCCATCAGGGAGATACTCATTATTTTCACCTCCCGGTAGTAGCTCCAATGTAAAGTCAGAACAACCTGGATTAGCAAATTTACCTCCCTTAGGACCTGGAAATGCTTCAGAATCAGGTCATTTTGGTCATGGTTTGTCGGCAGATTCAAGCCTGTTTAGTCTTGATATAAGCCGAATGTCTGATAACCCACCAAGAAAATTTGGTCATAGGCGTGCCCACTCAGAAATTCTTACTCTTCCTGATGATATTAGCTTTGATAGTGATCTTGGCGTTGTTGGACTAGATGGACCGTCTCTGTCAGATGAGACTGAGGAGGACATCTTGTCAATGTACCTTGACATGGATAAGTTCAATTCTTCAACTCTGTCTTCTGAATTCCAAGTGGGTGAGTCTTCTTCAGCTGCTCCAGGTTCATCACAAACAACAGCAATGGCTTCAGGAACAAATAAATTTGCTCCTACTGTTAGTGAGAAGCCAAGAGTTAGACATCAGCATAGCCAGTCCATGGATGGTTCAACTACAATCAAGCCAGAGATGCTCATGTCAGGAGTGGAAGAGCCTTCTTCAGCTGAAACTAAGAAAGCCACGTCAGCTGCAAAGCTTGCTGAACTTGCTCTTATTGATCCTAAACGTGCCAAGCGGTAAGGCTTTCTATGGAAATGTTGTTGCTCATTTACTATAGCAGTCTCTTTAACATTATTTTAGCTTGGCCTTGTCATTATATTTTGCTAAACTGGCACTGCTTAGGATGATACCGTTACGTGGAGGTCTGGTGGCAGACTAGAGTCTCCTAAACTATGAGCCCACTAAATGTGTGCTGGATGTTTAAAGCGGGCTTAGATATTATGCTTCATTGTTTTTTTATGAAAGCCTGCTCTGTTTTGGTGATAATCATTCATTCTGCTGGTGGTTAGGCATTTTATCTGTATTTTTCCTAGCTACTAGCTCCTTGAACTTTTGGATTTTGTTTAATGAAGCAGTTCTTGATGGAACTTCTAAAGGTCTGCCTGCGGCTTCGTCTGCTCCCTTTTCCTGTTCTAAGGCTGCCTCTGGCTGCTTCTGTCATCTTTTGCTGTTCAAAGGTTGAAAAGACTGAAATTATGAGAGTTACAGGAAGGAAAAATTAAAAAGAATAGACTGACCAGGCCCTTCTGTCTCTCTACTCTATCTGTCCAGCAAGTTGTTCCTGCTCCCCGAGCATTTCATTTCAATTTCTTGTCCTCTCCAGCTCTTCCTTGAGCCTACATCTGAACAAGCTCAGCTCCCCAAAAGTTGGTGTGTTCCAAACCACCTTTCAATAACAAATTCCTGCTTTCTTGGGTCCTCTAAATTAGTTAAAGTTAAACCTTTGTTGTTGGCTATGGGGGCCCACTGCCCCTCCCTTACTTTATAGACAATTTAAATTTATCTTCAAGAGGGAGGGGAAGGGTCAGGGAACATATGAGATTGAACACCCAAGGATATGACCTAGTGGCCAATGATGTGGGTGCAAACTCTGGAAACCCGTCCTAACAGAGACAAAAAGACGCTAGGTAATTTCTGGGCATTTGCTTAAGCCTTGCTGGCTGAGTACCCAGTAAGGTAGAAGGTAGCAAGTAGCCGGTGAAATAGTCGAGGTCCCACCATTCTTGTCTGTGCTCCACCTTAATGGAAAAAAAATAAGAGATCAAAAAAACTATGGCCCCTCCAAGGAGTGTGAAGCAGACAATTGTAGCTAATGAAGAAAGGTAAATCAATGGTGGCACATACAGAGAGACTGTGATTGTCCTTACAGGATTAGAGCCAAATACAATTCAAATGGCAGTAGAAATTTTTTTTATAAGGTTACTGGCTTGCACAAATTAGAGAAAAGTTATGGGATGGTTCGGTGTCTTAAGCTTATTTGTTGTCCTAGTCAAACTGTTCTTTTCCGGGTCCCATGCTTTTTTTGCTCAGCGACTTAGCAGTAGGCTAGTAGCTTCATTATGTTTTGTTTTGGTGGGAAAACTTAAATGTTGGTTCATTGCAGATGAAACTATAGTAGTACTTTAGTCTTGGTCTTTCTCCTGATATTAAATTAAGGCTCTTCTTATCTTTTGCTTTCTCGTGTCCTTTTACTTAGCAAAAATATTAAATAGACTTAAGGGAACTATATTACAATGTAGAGTGAGAAAATTGATTAATAGGAGCTGAATAGCAATAATGTTGTTTCTTTTGGACATCTAAGTTTAGTGACTATACTTGTAAATTAAAAACGGTTTTATAGAGTATTATCAAGAGTAAAATAAAGACTTTAGAATGCTAATATGCATGTTAACCAAGCCCGGTTTTATAGAGTTTAGTCAAGATGATTAAAATAAAGACTTTATAGGCGTCCACTATCAGTCAATGAACCAGGTCTCGACTCAGTAAGAACAGAATGTAAGCACAGACAGTAGTTAGCATCCACTATAGTTAACGGACCAGGTCTTGTGACTCAGCAAGAACAATAGCTGAAATAAGTGCAAAAAGTAAATAGCTGAAGGTAAAATTTGCACAAGCACTTTACGTGGAAACCTCCTTGCTCAAGGGAGTAAAACCACGACCTATCACACATGATTTTCAACTGTTTCACTAATCTTCTTTAAGCAAAAGTGAACCGCAGTTACAACCAATGTGAGAAAAAGTTATTAATCTCACGACCAAGTAATAACCTATTACTTGAAGAGTCTAAGCAGATGTTAGTCTGCCCACTAAGCTATCACCACTAGACAAATTAGGATTTGACTAAGCAACACGCAGGTTGCCTACTAAACCACCTAACTAAGCAGCACATACGGCTGCCTACTAAGCTATCACCACTAGACAACTTAGAATTTCAACTAAGCGAATGTCACACCGCCAACTAAATCACCTACCACTAGATAACTTAGAATTTGACTAAGCAACAACAATGTTGCCCTCTAAATCAGTTAGACTCAACTAATTTAGACCTTTTCACAAACCAAACTATCTGAATCCTTTATAGACTAGGAACAAGTTTACAATATATGGACGAAAATATAACTCCTAAGACACACTCTAATGCTTGCAACTTGATCAGGTCCTTGTTGTGTTTGCCGGAGAATACTTCACCAAAATGGTCTTTGCTTGTATACTTCAGAAGTTTCAAGATGCAAAAAAACTATAAATGAAAGAGACAAACTCAAACTCAACAAAGATGCTTCAACACTTTATAGATCTTTTTGATGAGTATGAGTATTGTTCTTTCTTGAAGATGGCTTTTTCCTTTTAACCTTGTGAGTTTTAATTTGCCAAAATCTTGTGTTTGTGTTTTGGAGAAGAGATTGTATCACCATGAACACAAACTCTTGGGACAAAGCTATTGGCCGAGAGTACGCTGTCATGAAAAGTTGTGCACCAACCACATCAGGGTTGACAACTTTTTGATAGTTGTCTTTTCGTCCTTTTCTCGTACGTAGAGTTTTCGGGACCAGGTCCCTTGCTGCGTTCTTTAATGCTTGAGTTCTTTGACAAAAGACTTGCTGACTTTTTCTCTTCTTGAATGAATGAACTTAATATGTTGTTTGTCATGTTGAATGTATCAACTCCATTTTGATTGGTTCAGTATGCTGGCGCCTCACCTACCACTGACAGGACAACTTTACAATTGTACACCATTATTGGTGCAGTACGCTGCACTTTTTACCTACCATCTGACATGGCATCTTTTTAGCTGTTCCCAGGATGAATTCGGACATTCTGCCAGGGGCCCGGTCCCTGCATTTGTGAGGATCATCAAAACATCTAGAATATTATATTTTCTCCCTTTTTGATGATTACACACAAATGTTCCTCACATTGAGTTTATTCATTAAGTTGCCCTGTCATCAGTCCCAATAACAAGGATCTGTGTCCCTTGTTAGATCAATAAGTTTATTAAATCATCAAAACTTAACATTAGCTCCAAAATAATATTTACCAACTCCATGAATGGTAAGGCAAAGTATAAGAACAATGAACATGTCTATTCACTATGACAAATAGAAAATTATTTTGAAATCCTCGACCAATCTATAAGAAAATACTTTTAATTTCTTCTGCTCAAACAGTAAATTATAGAAATTAGAAACTAGTACCATATGAGAATGGAGAAGTTTAAAAAGGTTATATAAATGAAGGATGTATATCCCAAGCTAGTGGTTCATTCGCTAAATCTATCAGAGAAAAAGATGGATGGTTTGTAAACAGTCCTTTTACCTTTTGGCTATGCTATTACTTGAAGTGGTGCTGAGGTTTGCTGTCTCCAGTCTGAAACCATTTCTCTATGTATCCATGAGGCCTTCTTTTTCCTGTCTTTTGCTCTCTTTTTAATCAGACAAATCATTAAGTTTGCTAAATACTGTTACTAGCAAAAAAAGGTTTCTTGTTGCTATCTAAGTCTTTGCACAGCTTTCTGAAAGTATTCATAGTGCATTGATGTAGGAGATCCACCTGTTTTAAGGTCTTTTGTGTTCCTTGAATTTGTTTGAATTTGTCTGATGTAGTTGTTTAAAAGTTAAGCCAATTAGTTAATCATCACTGTATTTGCTTATGCTGTGCAATAGGATTTGGGCCAACAGGCAGTCAGCTGCAAGATCAAAGGAAAGGAAAATGAGATATATAGCAGAGCTTGAGAGAAAAGTTCAGACTCTGCAAACGGAAGCAACTACTTTATCTACTCAGTTGACCCTATTGCAGGTGTATATCAGTTTCTCTCATTACTCAGTTATTTTTTGTGTTCTTTCCTCTTTTTATTTCTGTTGTTTTCTGTTATTGGAAACATGTCTAGTGTGGTTGAAGTGATGGAAGTAGATAAGTTCTTGGTCTAGAATCTGCAGCATTTGCTTGCACATGGAAAAATGTGCAGATATATGTATCTTCAGCCTTTTTCTCACGTATAACATAAGACTATTGGTTTTGATTTGCCTTTTTTTTTCTCCATATGAAACAGAGAGATACAAACGGCCTGAATGCTGAAAACAGTGAACTTAAACTGCGTTTACAAACAATGGAACAACAGGTTCACTTGCAAGATGGTAAGAATCTGAGCATGACTTCTTTTAGTAAACTTTTTGCCCATAACCCACCTCCTCTTTTTATCTGTCTGAACAATGGTTGCCGTTTCTCAATGGCATCTAGAGTGACTTTAGTTCAAGTGTTCGACCATTTAAGATGATTCAAAGTGGATTTGTTGTCAACCGCAAGTTAATATCTGGCTGTATTTAGGCTTCGTTGGTTTCAAGAATTTCCTCAATTTCAGAAGAAAGTAAAAATCAATTTTGATATACTTGATCATTTTCACATTGGGTGTGTTAACTGCGTTTTTTGTGGTTAAAAATAAAGTAATTCTGCCATATTCTCATCTTATGGTACAAAAACCGAGATAACATGAATTCCAGTTTGACCTTACAAGGTCAAACATAGTTTAAATTTGGACCGGGTTGACGTAGATATAGGAATACAATATATAGTCCAAATAATTTTGAAGTTGGTACTTTTTGAATTCTAATAGTTGTACTGGAGGTTAGATTTCAGATGTTAGAACTTCAAAAGCTTTTGTTTCTCATAACATTATCCTGTGGTTATAGAAGTGAACATTGAGAAATTCATATTGTTAGTGTCATGATTGGCACCCATGTATTAGGTAATATTCTGTTTAATCCGTAAAAAATCTTGATAAGTATGTCAGTGTTAAGAAATGTGAGGAAGTTATCAATAAGGTGGTTAGGAGACACCGAGAGGCTGCTAATCACCTTGTAGGTTCTTGAAACCATTGAAATTTTCAATGATCATATTTCAACCAGAACCTTGTTTTTCTGCTCTCCGTGAACAATGCAATTAGGCAGATAAGAACTTCTTCAGTCAAATTCCGCTTGCAACTCTATGTGGATAATGGATTTAGCACCTGACTACTGAGTAACATATGCCTAGGGAAAACACTTCCATGAGATTGCTAGAGTTGCATATGTAATTTCCTTGGATAGGAATTTGTGAACAACTAATTCATCTCTACCAATTAGTTGGAGTTTTTTGTGTAGAGTTGCTAATAGGTATTTTGATCTGTTTCTTCTTCTTCTTCTTTCTATGTAGCGTTGAATGATGCTTTAAAGGAGGAGATACAGCATCTGAAAGTGCTAACTGGGCAAGGCATAGCAAATGGTGGACCTATGATGAACTTCCCAGCAACCTTTGGAGGCAATCAGCAGTTCTACTCTAACAACCAGGCAATGCATACATTGTTGGCTGCACAACAACTTCAACAGCTCCAGCTACATTCTCATAAGCAACAACACCAGTTTCAGCAACATCAGCTACACCAGTTTCAGCAGCAACAGTTGCAGCACCAACAACAGCAACAGCAACCTCTTATGCAGCAGCAGCAGCAGCAGGATCAACTTTCACAAGCCGGAGATGTGATGTCAAGAGGTTCTCTGTCATCTCCTCAAAATGAAAACGCTTCTGATGTTAGTTCTGTAGCAAAGGATTGAACAGCTGATGGCCAGAGAGACAGGAGATGGTGTATGTTTTAAAAATCATCATGTGTTTTCCCATCTAGCAGCTCATTTTTGTGTTTCAAAATCATCACGTGTTGAAACAACATCTAGCTCAGGTTCTCTTGCTTTCAGTTAGCTCCTTCATCTGCATTTTAGTACTTTTGTAGGGTCATTTGACTTTTAGTTGAAATTGTTCAAATCCCATTCTATGCATATGTCATTTTGTCAACTATCAACATGATTTTCTTCATGTTACCAATATTGTTGGTGGTAGTTTTTTTGGACATCAATCACTTATATCTCTCTCACACTGTTCAGTGTTCACATTTTTCGAATAATGTTTTGT-G----G-------CT-TGCGCGATCGTGGAGGGTAAAATTCTCATGGTGCTCCTCAATAGGTAGGATTTACCAGAGGCGGATCCAGAGCGTAAACTATGGGGTTCAAGGAACTCCATAACTTTTATCTAGGCCTTTAAATGTATTCGTTAAATATTTGATCGTGAACTTGGTTAAATATTGTAATCCCCTATCCCTGTACATAATACTGGTTGGTTCCATCTTATAACTGTCTCTTCTAAATCTGTTATATCATTTCAGAGAAAAAGTTA</genome_strand>
        <mrna_strand>GGTCCTCCCTGTCCGAATTTATAGTGTTTCCATTCTCACACAGATTTGCCTCTTTGTTTATCGTCTCTCTTCTCCACAAGCTTTTCCCTTTTCTCTCTCGCATGTGATAAAGCTGCTTCCTTCTGCTTCTGCTTCCCTTTTCACA-TTTTCCCTTCTCTGCAGATCTAATTTCAAAGCTAATCGAAACCGA.......................................................................................................................................................................................................................AACCGT.....................................................AGGGAATTGATCTGGGATAAGCTTGGTTGGTGTTTGCGGAATCTACAGGGTCTCAGCAAGGGGTTTCATGTTCTG.....................................................................AGGAAAAGCAACTTGGATTGTGATTTTATGGTTTTCCTGCTATAATGTTCTTGCTTTGACCGGGGAAAAGTATCATTACTTGTTGATTTTTGGTTTTCTGTTGGTACGGTTCTTGTTGGAGTATATATATATGTGTGGGATGTTGGGTTTGTTCCTGTGCTGTTAACATTTGGAATTTGAAGGGTTGGGGTTTTTTCTGTTTGGATTTGGAGGGTTTGTATGGATAAGGATAAGTCTTCTTCAAGCCATATAGGAGGTTCGTTGCCTCCATCAGGGAGATACTCATTATTTTCACCTCCCGGTAGTAGCTCCAATGTAAAGTCAGAACAACCTGGATTAGCAAATTTACCTCCCTTAGGACCTGGAAATGCTTCAGAATCAGGTCATTTTGGTCATGGTTTGTCGGCAGATTCAAGCCTGTTTAGTCTTGATATAAGCCGAATGTCTGATAACCCACCAAGAAAATTTGGTCATAGGCGTGCCCACTCAGAAATTCTTACTCTTCCTGATGATATTAGCTTTGATAGTGATCTTGGCGTTGTTGGACTAGATGGACCGTCTCTGTCAGATGAGACTGAGGAGGACATCTTGTCAATGTACCTTGACATGGATAAGTTCAATTCTTCAACTCTGTCTTCTGAATTCCAAGTGGGTGAGTCTTCTTCAGCTGCTCCAGGTTCATCACAAACAACAGCAATGGCTTCAGGAACAAATAAATTTGCTCCTACTGTTAGTGAGAAGCCAAGAGTTAGACATCAGCATAGCCAGTCCATGGATGGTTCAACTACAATCAAGCCAGAGATGCTCATGTCAGGAGTGGAAGAGCCTTCTTCAGCTGAAACTAAGAAAGCCACGTCAGCTGCAAAGCTTGCTGAACTTGCTCTTATTGATCCTAAACGTGCCAAGCG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTTGGGCCAACAGGCAGTCAGCTGCAAGATCAAAGGAAAGGAAAATGAGATATATAGCAGAGCTTGAGAGAAAAGTTCAGACTCTGCAAACGGAAGCAACTACTTTATCTACTCAGTTGACCCTATTGCAG.............................................................................................................................................................................................................................................................AGAGATACAAACGGCCTGAATGCTGAAAACAGTGAACTTAAACTGCGTTTACAAACAATGGAACAACAGGTTCACTTGCAAGATG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTTGAATGATGCTTTAAAGGAGGAGATACAGCATCTGAAAGTGCTAACTGGGCAAGGCATAGCAAATGGTGGACCTATGATGAACTTCCCAGCAACCTTTGGAGGCAATCAGCAGTTCTACTCTAACAACCAGGCAATGCATACATTGTTGGCTGCACAACAACTTCAACAGCTCCAGCTACATTCTCATAAGCAACAACACCAGTTTCAGCAACATCAGCTACACCAGTTTCAGCAGCAACAGTTGCAGCACCAACAACAGCAACAGCAACCTCTTATGCAGCAGCAGCAGCAGCAGGATCAACTTTCACAAGCCGGAGATGTGATGTCAAGAGGTTCTCTGTCATCTCCTCAAAATGAAAATGCTTCTGATGGTAGTTCTGTAGCAAAGGATTGAACAGCTGATGGCCAGAGAGACAGGAGTTGGTGTATGTTTTAAAAAATATCATGTGTTTTCCCATCTAGCAGCTCATTTTTGTGTTTCAAAATCATCACGTGTTAAAACAACATCTAGCTCAGG-T-TCTTGCTTTCAGTTAGCTCCTTCATCTGCATTTTAGTAC-TTTGTAGGGTCATTTGACTTTTAGTTGAAATTGTTCAAATCCCATTCTACGC--ATGTCATTTTGTCAACTATCAACATGATTTTCTTCATGTTACCAATATTGTTGGTGGTAGTTTTTTTGGACATCAATCACTTATATCTCTCTCACACTGTTCAGTGTTCACATTTTTCGAATAATGTTTTGTGGCAATGTCTCCAACTCTGCGCGATCGTGGAGGGTAAAATTCTCATGGTGCTCCTCAATAGGTAGGACTTACCAGTGGCGGATCCAGAGCTTAAACTATGGGGTTCAAGGAACTCCATAACTTTTATCTAGGCCTTTAAATGTATTCGTTAAATATTTGATCGTGAACTTAGTTAAATATTGTAAACCCC......................................................................AAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U337173" ref_strand="-" ref_description="SGN-U337173        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: | Symbol: None | bZIP transcription factor, putative (bZIP69), similar to transcriptional activator RF2a GB:AF005492 GI:2253277 from (Oryza sativa); contains Pfam profile PF00170: bZIP transcription factor | chr1:1834828-1837647 REVERSE | Aliases: T21E18.12, T21E18_12(evalue: 9e-16, score=79.3) genbank/nr: gi|15221391|ref|NP_172097.1| bZIP protein [Arabidopsis thaliana] gi|25406894|pir||H86195 hypothetical protein [imported] - Arabidopsis thaliana gi|8810469|gb|AAF80130.1| Contains similarity to a b-Zip binding protein from Arabidopsis thaliana gb|Z86093 and contains a b-Zip transcription factor PF|00170 domain.  ESTs gb|AV551499, gb|T04752, gb|AV550784, gb|AV550336, gb|AV545846, gb|AV538486, gb|AV542369, gb|AV538179 come from this gene gi|17065886|emb|CAD12037.1| AtbZIP transcription factor [Arabidopsis thaliana](evalue: 6e-14, score=79.3)">
      <seq>tcagctgcaaagcttgctgaacttgctcttatgattcctaaacgtgccaagcggatttgggccaacaggcagtccagctgcaagatcaactttcacaagccggagatgtgatgtcaagaggttctctgtcatctcctcaaaatgaaaacgcttctgatgttagttctgtagcaaaggattgaacagctgatggccagagagacaggagatggtgtatgttttaaaaatcatcatgtgttttcccatctagcagctcatttttgtgtttcaaaatcatcacgtgttgaaacaacatctagctcaggttctcttgctttcagttagctccttcatctgcattttagtacttttgtagggtcatttgacttttagttgaaattgttcaaatcccattctatgcatatgtcattttgtcaactatcaacatgattttcttcatgttaccaatattgttggtggtagtttttttggacatcaatcacttatatctctctcacaaaaaaaaaaaaaaaaaaaaaaactcgaga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0167M06.1" temp_strand="-" temp_description="C06HBa0167M06.1  AC211057.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0167M06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="70975" stop="64160"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="70675" g_stop="70623" g_length="53"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="53" r_length="53" r_score="0.943"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="70622" i_stop="66699" i_length="3924">
            <donor d_prob="1.000" d_score="0.94"/>
            <acceptor a_prob="0.996" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="66698" g_stop="66678" g_length="21"/>
          <reference_exon_boundary r_type="cDNA" r_start="54" r_stop="74" r_length="21" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="66677" i_stop="64884" i_length="1794">
            <donor d_prob="0.000" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="64883" g_stop="64460" g_length="424"/>
          <reference_exon_boundary r_type="cDNA" r_start="75" r_stop="498" r_length="424" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="499" polyA_stop="521"/>
      <MATCH_line gen_id="C06HBa0167M06.1" gen_strand="-" ref_id="SGN-U337173" ref_strand="-">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>498</cumulative_length_of_scored_exons>
        <coverage percentage="0.945" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0167M06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U337173" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="70675" e_stop="70623"/>
          <exon e_start="66698" e_stop="66678"/>
          <exon e_start="64883" e_stop="64460"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAGCTGCAAAGCTTGCTGAACTTGCTCTTATTGATCCTAAACGTGCCAAGCGGTAAGGCTTTCTATGGAAATGTTGTTGCTCATTTACTATAGCAGTCTCTTTAACATTATTTTAGCTTGGCCTTGTCATTATATTTTGCTAAACTGGCACTGCTTAGGATGATACCGTTACGTGGAGGTCTGGTGGCAGACTAGAGTCTCCTAAACTATGAGCCCACTAAATGTGTGCTGGATGTTTAAAGCGGGCTTAGATATTATGCTTCATTGTTTTTTTATGAAAGCCTGCTCTGTTTTGGTGATAATCATTCATTCTGCTGGTGGTTAGGCATTTTATCTGTATTTTTCCTAGCTACTAGCTCCTTGAACTTTTGGATTTTGTTTAATGAAGCAGTTCTTGATGGAACTTCTAAAGGTCTGCCTGCGGCTTCGTCTGCTCCCTTTTCCTGTTCTAAGGCTGCCTCTGGCTGCTTCTGTCATCTTTTGCTGTTCAAAGGTTGAAAAGACTGAAATTATGAGAGTTACAGGAAGGAAAAATTAAAAAGAATAGACTGACCAGGCCCTTCTGTCTCTCTACTCTATCTGTCCAGCAAGTTGTTCCTGCTCCCCGAGCATTTCATTTCAATTTCTTGTCCTCTCCAGCTCTTCCTTGAGCCTACATCTGAACAAGCTCAGCTCCCCAAAAGTTGGTGTGTTCCAAACCACCTTTCAATAACAAATTCCTGCTTTCTTGGGTCCTCTAAATTAGTTAAAGTTAAACCTTTGTTGTTGGCTATGGGGGCCCACTGCCCCTCCCTTACTTTATAGACAATTTAAATTTATCTTCAAGAGGGAGGGGAAGGGTCAGGGAACATATGAGATTGAACACCCAAGGATATGACCTAGTGGCCAATGATGTGGGTGCAAACTCTGGAAACCCGTCCTAACAGAGACAAAAAGACGCTAGGTAATTTCTGGGCATTTGCTTAAGCCTTGCTGGCTGAGTACCCAGTAAGGTAGAAGGTAGCAAGTAGCCGGTGAAATAGTCGAGGTCCCACCATTCTTGTCTGTGCTCCACCTTAATGGAAAAAAAATAAGAGATCAAAAAAACTATGGCCCCTCCAAGGAGTGTGAAGCAGACAATTGTAGCTAATGAAGAAAGGTAAATCAATGGTGGCACATACAGAGAGACTGTGATTGTCCTTACAGGATTAGAGCCAAATACAATTCAAATGGCAGTAGAAATTTTTTTTATAAGGTTACTGGCTTGCACAAATTAGAGAAAAGTTATGGGATGGTTCGGTGTCTTAAGCTTATTTGTTGTCCTAGTCAAACTGTTCTTTTCCGGGTCCCATGCTTTTTTTGCTCAGCGACTTAGCAGTAGGCTAGTAGCTTCATTATGTTTTGTTTTGGTGGGAAAACTTAAATGTTGGTTCATTGCAGATGAAACTATAGTAGTACTTTAGTCTTGGTCTTTCTCCTGATATTAAATTAAGGCTCTTCTTATCTTTTGCTTTCTCGTGTCCTTTTACTTAGCAAAAATATTAAATAGACTTAAGGGAACTATATTACAATGTAGAGTGAGAAAATTGATTAATAGGAGCTGAATAGCAATAATGTTGTTTCTTTTGGACATCTAAGTTTAGTGACTATACTTGTAAATTAAAAACGGTTTTATAGAGTATTATCAAGAGTAAAATAAAGACTTTAGAATGCTAATATGCATGTTAACCAAGCCCGGTTTTATAGAGTTTAGTCAAGATGATTAAAATAAAGACTTTATAGGCGTCCACTATCAGTCAATGAACCAGGTCTCGACTCAGTAAGAACAGAATGTAAGCACAGACAGTAGTTAGCATCCACTATAGTTAACGGACCAGGTCTTGTGACTCAGCAAGAACAATAGCTGAAATAAGTGCAAAAAGTAAATAGCTGAAGGTAAAATTTGCACAAGCACTTTACGTGGAAACCTCCTTGCTCAAGGGAGTAAAACCACGACCTATCACACATGATTTTCAACTGTTTCACTAATCTTCTTTAAGCAAAAGTGAACCGCAGTTACAACCAATGTGAGAAAAAGTTATTAATCTCACGACCAAGTAATAACCTATTACTTGAAGAGTCTAAGCAGATGTTAGTCTGCCCACTAAGCTATCACCACTAGACAAATTAGGATTTGACTAAGCAACACGCAGGTTGCCTACTAAACCACCTAACTAAGCAGCACATACGGCTGCCTACTAAGCTATCACCACTAGACAACTTAGAATTTCAACTAAGCGAATGTCACACCGCCAACTAAATCACCTACCACTAGATAACTTAGAATTTGACTAAGCAACAACAATGTTGCCCTCTAAATCAGTTAGACTCAACTAATTTAGACCTTTTCACAAACCAAACTATCTGAATCCTTTATAGACTAGGAACAAGTTTACAATATATGGACGAAAATATAACTCCTAAGACACACTCTAATGCTTGCAACTTGATCAGGTCCTTGTTGTGTTTGCCGGAGAATACTTCACCAAAATGGTCTTTGCTTGTATACTTCAGAAGTTTCAAGATGCAAAAAAACTATAAATGAAAGAGACAAACTCAAACTCAACAAAGATGCTTCAACACTTTATAGATCTTTTTGATGAGTATGAGTATTGTTCTTTCTTGAAGATGGCTTTTTCCTTTTAACCTTGTGAGTTTTAATTTGCCAAAATCTTGTGTTTGTGTTTTGGAGAAGAGATTGTATCACCATGAACACAAACTCTTGGGACAAAGCTATTGGCCGAGAGTACGCTGTCATGAAAAGTTGTGCACCAACCACATCAGGGTTGACAACTTTTTGATAGTTGTCTTTTCGTCCTTTTCTCGTACGTAGAGTTTTCGGGACCAGGTCCCTTGCTGCGTTCTTTAATGCTTGAGTTCTTTGACAAAAGACTTGCTGACTTTTTCTCTTCTTGAATGAATGAACTTAATATGTTGTTTGTCATGTTGAATGTATCAACTCCATTTTGATTGGTTCAGTATGCTGGCGCCTCACCTACCACTGACAGGACAACTTTACAATTGTACACCATTATTGGTGCAGTACGCTGCACTTTTTACCTACCATCTGACATGGCATCTTTTTAGCTGTTCCCAGGATGAATTCGGACATTCTGCCAGGGGCCCGGTCCCTGCATTTGTGAGGATCATCAAAACATCTAGAATATTATATTTTCTCCCTTTTTGATGATTACACACAAATGTTCCTCACATTGAGTTTATTCATTAAGTTGCCCTGTCATCAGTCCCAATAACAAGGATCTGTGTCCCTTGTTAGATCAATAAGTTTATTAAATCATCAAAACTTAACATTAGCTCCAAAATAATATTTACCAACTCCATGAATGGTAAGGCAAAGTATAAGAACAATGAACATGTCTATTCACTATGACAAATAGAAAATTATTTTGAAATCCTCGACCAATCTATAAGAAAATACTTTTAATTTCTTCTGCTCAAACAGTAAATTATAGAAATTAGAAACTAGTACCATATGAGAATGGAGAAGTTTAAAAAGGTTATATAAATGAAGGATGTATATCCCAAGCTAGTGGTTCATTCGCTAAATCTATCAGAGAAAAAGATGGATGGTTTGTAAACAGTCCTTTTACCTTTTGGCTATGCTATTACTTGAAGTGGTGCTGAGGTTTGCTGTCTCCAGTCTGAAACCATTTCTCTATGTATCCATGAGGCCTTCTTTTTCCTGTCTTTTGCTCTCTTTTTAATCAGACAAATCATTAAGTTTGCTAAATACTGTTACTAGCAAAAAAAGGTTTCTTGTTGCTATCTAAGTCTTTGCACAGCTTTCTGAAAGTATTCATAGTGCATTGATGTAGGAGATCCACCTGTTTTAAGGTCTTTTGTGTTCCTTGAATTTGTTTGAATTTGTCTGATGTAGTTGTTTAAAAGTTAAGCCAATTAGTTAATCATCACTGTATTTGCTTATGCTGTGCAATAGGATTTGGGCCAACAGGCAGTCAGCTGCAAGATCAAAGGAAAGGAAAATGAGATATATAGCAGAGCTTGAGAGAAAAGTTCAGACTCTGCAAACGGAAGCAACTACTTTATCTACTCAGTTGACCCTATTGCAGGTGTATATCAGTTTCTCTCATTACTCAGTTATTTTTTGTGTTCTTTCCTCTTTTTATTTCTGTTGTTTTCTGTTATTGGAAACATGTCTAGTGTGGTTGAAGTGATGGAAGTAGATAAGTTCTTGGTCTAGAATCTGCAGCATTTGCTTGCACATGGAAAAATGTGCAGATATATGTATCTTCAGCCTTTTTCTCACGTATAACATAAGACTATTGGTTTTGATTTGCCTTTTTTTTTCTCCATATGAAACAGAGAGATACAAACGGCCTGAATGCTGAAAACAGTGAACTTAAACTGCGTTTACAAACAATGGAACAACAGGTTCACTTGCAAGATGGTAAGAATCTGAGCATGACTTCTTTTAGTAAACTTTTTGCCCATAACCCACCTCCTCTTTTTATCTGTCTGAACAATGGTTGCCGTTTCTCAATGGCATCTAGAGTGACTTTAGTTCAAGTGTTCGACCATTTAAGATGATTCAAAGTGGATTTGTTGTCAACCGCAAGTTAATATCTGGCTGTATTTAGGCTTCGTTGGTTTCAAGAATTTCCTCAATTTCAGAAGAAAGTAAAAATCAATTTTGATATACTTGATCATTTTCACATTGGGTGTGTTAACTGCGTTTTTTGTGGTTAAAAATAAAGTAATTCTGCCATATTCTCATCTTATGGTACAAAAACCGAGATAACATGAATTCCAGTTTGACCTTACAAGGTCAAACATAGTTTAAATTTGGACCGGGTTGACGTAGATATAGGAATACAATATATAGTCCAAATAATTTTGAAGTTGGTACTTTTTGAATTCTAATAGTTGTACTGGAGGTTAGATTTCAGATGTTAGAACTTCAAAAGCTTTTGTTTCTCATAACATTATCCTGTGGTTATAGAAGTGAACATTGAGAAATTCATATTGTTAGTGTCATGATTGGCACCCATGTATTAGGTAATATTCTGTTTAATCCGTAAAAAATCTTGATAAGTATGTCAGTGTTAAGAAATGTGAGGAAGTTATCAATAAGGTGGTTAGGAGACACCGAGAGGCTGCTAATCACCTTGTAGGTTCTTGAAACCATTGAAATTTTCAATGATCATATTTCAACCAGAACCTTGTTTTTCTGCTCTCCGTGAACAATGCAATTAGGCAGATAAGAACTTCTTCAGTCAAATTCCGCTTGCAACTCTATGTGGATAATGGATTTAGCACCTGACTACTGAGTAACATATGCCTAGGGAAAACACTTCCATGAGATTGCTAGAGTTGCATATGTAATTTCCTTGGATAGGAATTTGTGAACAACTAATTCATCTCTACCAATTAGTTGGAGTTTTTTGTGTAGAGTTGCTAATAGGTATTTTGATCTGTTTCTTCTTCTTCTTCTTTCTATGTAGCGTTGAATGATGCTTTAAAGGAGGAGATACAGCATCTGAAAGTGCTAACTGGGCAAGGCATAGCAAATGGTGGACCTATGATGAACTTCCCAGCAACCTTTGGAGGCAATCAGCAGTTCTACTCTAACAACCAGGCAATGCATACATTGTTGGCTGCACAACAACTTCAACAGCTCCAGCTACATTCTCATAAGCAACAACACCAGTTTCAGCAACATCAGCTACACCAGTTTCAGCAGCAACAGTTGCAGCACCAACAACAGCAACAGCAACCTCTTATGCAGCAGCAGCAGCAGCAGGATCAACTTTCACAAGCCGGAGATGTGATGTCAAGAGGTTCTCTGTCATCTCCTCAAAATGAAAACGCTTCTGATGTTAGTTCTGTAGCAAAGGATTGAACAGCTGATGGCCAGAGAGACAGGAGATGGTGTATGTTTTAAAAATCATCATGTGTTTTCCCATCTAGCAGCTCATTTTTGTGTTTCAAAATCATCACGTGTTGAAACAACATCTAGCTCAGGTTCTCTTGCTTTCAGTTAGCTCCTTCATCTGCATTTTAGTACTTTTGTAGGGTCATTTGACTTTTAGTTGAAATTGTTCAAATCCCATTCTATGCATATGTCATTTTGTCAACTATCAACATGATTTTCTTCATGTTACCAATATTGTTGGTGGTAGTTTTTTTGGACATCAATCACTTATATCTCTCTCACA</genome_strand>
        <mrna_strand>TCAGCTGCAAAGCTTGCTGAACTTGCTCTTATGATTCCTAAACGTGCCAAGCG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTTGGGCCAACAGGCAGTC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCTGCAAGATCAACTTTCACAAGCCGGAGATGTGATGTCAAGAGGTTCTCTGTCATCTCCTCAAAATGAAAACGCTTCTGATGTTAGTTCTGTAGCAAAGGATTGAACAGCTGATGGCCAGAGAGACAGGAGATGGTGTATGTTTTAAAAATCATCATGTGTTTTCCCATCTAGCAGCTCATTTTTGTGTTTCAAAATCATCACGTGTTGAAACAACATCTAGCTCAGGTTCTCTTGCTTTCAGTTAGCTCCTTCATCTGCATTTTAGTACTTTTGTAGGGTCATTTGACTTTTAGTTGAAATTGTTCAAATCCCATTCTATGCATATGTCATTTTGTCAACTATCAACATGATTTTCTTCATGTTACCAATATTGTTGGTGGTAGTTTTTTTGGACATCAATCACTTATATCTCTCTCACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U318312" ref_strand="+" ref_description="SGN-U318312        Tomato 200607 #1 [14 ESTs aligned] arabidopsis/peptide: | Symbol: None | signal recognition particle 14 kDa family protein / SRP14 family protein, similar to SP:P16254 Signal recognition particle 14 kDa protein (SRP14) {Mus musculus}; contains Pfam profile: PF02290 signal recognition particle 14kD protein | chr2:18104578-18106139 REVERSE | Aliases: F18O19.25(evalue: 2e-30, score=129) genbank/nr: gi|15224325|ref|NP_181892.1| signal recognition particle protein 14kD, ATSRP14 -related [Arabidopsis thaliana] gi|25350234|pir||F84868 hypothetical protein At2g43640 [imported] - Arabidopsis thaliana gi|2281106|gb|AAB64042.1| putative signal recognition particle protein 14kD, ATSRP14 [Arabidopsis thaliana] gi|21618107|gb|AAM67157.1| putative 14kD signal recognition particle protein ATSRP14 [Arabidopsis thaliana] gi|27765064|gb|AAO23653.1| At2g43640 [Arabidopsis thaliana](evalue: 2e-28, score=129)">
      <seq>tttctttgacccatcgcttctcttcatcgctgtgttgaagttttggtttttgagttttgagatttgctgttcgaagatggtgcgattacagccagacccattcctcaatgaactgacgagtatgtttgagcgaactactgagcatggttccgtttgggttacgcttaaacactcttctgataaatctaaagcccaacggaataagatgaagacagctggtgaaactcttgaatttaagtgcctcatccgagcaactgatgggaaaaagaatatttccacaatggttggagcaaaagatcaccagcgtttccaagcatcttatgcaattttgctgaaggcccggttgactgcactaaagaagagggagaggaaggacaagaggaaggctactgattctgacaaaaagatggatatttcgaaaaagaaatctgctgctgctaaagcctctacatgaaactttagtcctttggtttattcccccattttgtttctaggatagagttgtaggatttgaaccccatccatttggggcgacaagtctgaaacttcattacaactccactgcatagaatgaagaaaggaggtgtttttactcaatttgattattcacatctaaattagtcaaactttttaaagagcttgttgggttatggaacagttgaaggaattttgtcataatcttgatcttttaattccttgaacaacagctttggcaattgaaagtagatgggaccaaattaaaagtagtatgcctacatacttgaatgtcatgtcaactgcatatgtccatactttttgcgcgtgggaacttaaaatgacatttttttgcttctttttgttcaaccagttctttttccactgttccaaaaccat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0167M06.1" temp_strand="+" temp_description="C06HBa0167M06.1  AC211057.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0167M06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="73681" stop="83378"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="73981" g_stop="74059" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="79" r_length="79" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="74060" i_stop="74824" i_length="765">
            <donor d_prob="0.726" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="74825" g_stop="74918" g_length="94"/>
          <reference_exon_boundary r_type="cDNA" r_start="80" r_stop="173" r_length="94" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="74919" i_stop="75010" i_length="92">
            <donor d_prob="0.958" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="75011" g_stop="75120" g_length="110"/>
          <reference_exon_boundary r_type="cDNA" r_start="174" r_stop="283" r_length="110" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="75121" i_stop="82488" i_length="7368">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="82489" g_stop="83078" g_length="590"/>
          <reference_exon_boundary r_type="cDNA" r_start="284" r_stop="873" r_length="590" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0167M06.1" gen_strand="+" ref_id="SGN-U318312" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>873</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0167M06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U318312" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="73981" e_stop="74059"/>
          <exon e_start="74825" e_stop="74918"/>
          <exon e_start="75011" e_stop="75120"/>
          <exon e_start="82489" e_stop="83078"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCTTTGACCCATCGCTTCTCTTCATCGCTGTGTTGAAGTTTTGGTTTTTGAGTTTTGAGATTTGCTGTTCGAAGATGGTAAGCGCTAACTTCAACTCATCAAAATCAATTGATCGCAATACTCTTTCGAATCAAATCTGGAAATCAAACAATGTAGAATTTTTTGATGTTAATTTTTCTTTGTTTACGCCGTTTTCAGCTTTATTTGATCTATATTTCCTTTTTGAGATTATGGGTTTCTGTAGAGTATAAATTCATGTTAGATTCTTTGTGTTCTTGAGTTGTTATGTATGTATCCCGAATCTCACTATATTGAATTGTGGAAATTAGTTAATACCAGTTTAAAATGGTGCTTATCGATTGAATTAACTAATTGGGGGTTGAGGTGATGGAAAACTTTCCCACTTAGCATTATACTCGAGTGCTGATGAATTTGATGTGTAGGTTAGAAAATTTGTTGAATCTGATGTTTTTACTTCATCCTTTAACTGGATAAAGGAGGAGGATTACATGGGTTGGGTTGATAGCCAGCGTAGAAATAAGCGAAATTACAGGAATCTTCTAAGTCTACACACTGGTTTCATCCTTGCTTTCTCTCCTGAGCACACACTCAAGCTACCCAACTACTGTATTTCTTCCTCCTTTATTCAGGTGGCACTGGTGAAGCATGCTCACATTGTTTATGTTAAGTAATCACATTGTGGAGTTCAATGTGCTTCCTATTTGTGGATACAAAATTATATGGCATTTTGCTTATTTTTGGGAAGTTTGAAAGAAGTGGCTTTGTCCATCTTTTTGGTAGAACATAAGTTGACAATTACTGATCTGAATTGGATTTGTCAGGTGCGATTACAGCCAGACCCATTCCTCAATGAACTGACGAGTATGTTTGAGCGAACTACTGAGCATGGTTCCGTTTGGGTTACGCTTAAACACTGTGAGTTTGCCTCTTCGTTGGTTTTCCTGTGTTTTGTGCTTTGTATTCTCTTTATGAGTAATACTGATTGAGCAATCTTGTCCTTTGTATAGCTTCTGATAAATCTAAAGCCCAACGGAATAAGATGAAGACAGCTGGTGAAACTCTTGAATTTAAGTGCCTCATCCGAGCAACTGATGGGAAAAAGAATATTTCCACAATGGTAATTATCACAATAGAAAGTCTCTTACCTTTTTCCATCACCTTCTTTTTGCAAGTCTTGTCGTTTTCCCCATTTTTTTGCTTTGTTGGGCACTATGTTCTCTGGAACATTGAGGGTGTTAGTTTGTTGTATGAATTATTTTTTAGCATAAGTTTAAATGTGCAAATATAGATAATTCTAGGTCCTGGCCTGTATGTTTGAGATTGAGAGCATCAAATTCAAAAAAAGGATGGTAGCCTTGTGGTGCATAGAGAATGGGAGTCGTGGTCCTTGTTTACTTGATTGATAACTAATAGGTATCGTACATGCTTGTAATACAATATTAGAGCACATAAAGGGACAATTTCTCATAAAAGGCAAACAAATTATGGATGCAACTCTTTTAGTCAGTGAACCTGTGGATTCTAGACTCGAAGGTGAAGATCCAGGGATCATGTGAAACCTAGCTATAGAGAACCCATTATGATCATGTCAACTGGGAGTTACTTCTCAACCTTCTTTAAAAAATGGGTTTTGGTGGAAGATGGTTAAAGTGGATGGTTTTTGTATCAATACTGTCCTGAATTCTAGTCATAGGAGAAATTGCTGGAATTTTCCCTCAGAGAAAGAGGACTCGGGGAGACCCCCCTCTCTTTGCCTTTTCATATTAGCTATGGAAGGTTTCAGTAGTATGATGAGAGGTACTATTCAGAACAGTGGATAAAAGGTTTCAGGATAGGCAATCAAGCAGGGGAAGAGATGTAGATTTCCTTTCATTATTGCTGATGATATAGTTGTTTTCTAAGATGCTAAAGCAGATCAGATCATGTACATCAGAATGATTTTGGTGATCTTTGGGCAATTTTTGGTCCATTTGTAAAATTGGAGGAAAGGTAGTAGTTTCCCTGTCAAAGAAGTTCCACAAATTCAATGCCTGTCCATGTTATAAGTTTCGATGATTTAACAAACTATGACATCTAGTTGGGGACCTGATCCCATGAGGGACTGAGAGTTTCAGGCAATGTGCAAAGGACAGTTGTAAAGCTGCAACTGCTGCCACAATTGCAGTGGTTGGTGCACCTTTTCAGAGGAATAGTACTCAGCCAATGGCGTTGCACTAGGTAGTTTGTCCATCTTATAATAGTCATCTTGTCAAGGGACGTTTCCTAATTTTTGAGTTGAAGATTTCCATACGGCAAAATCCACTCTCAAAAAGAAATATTCTCATATGCATCAAGAGATCTGATCGAGTGATCTACTGTTCCCTTTAGTTGTTATTTTAGTTTATCGTCTCGTGTTTATACAGTGTAAGATCTGTTCATATGTTATAAAGGAATCAGATCATTTCAGTTGTAATCGTTGTTAAAAGTTTGAGTTGTAGCTAGAGTTAGCTATGTCGTGTTCTTGAAGTCTACATTAACTTAGCTTGTTGGCGTAGTAGGCAATAGAGGTATTACTTTGTTTATGAGTAACAAAGCTGTTACGAAAGGAGAAGGGATTAAGAGTTCATTTCCTAGGTTGCAAGAGTTTGTAATCGGGATCTTAACTCTTTGAAGTAATGGAATTGGCGAAATCCTGTGAGACAGGTTGTGATTTTCTCCTTCCTTAAGCAAGGGGGTTAACACGTAAACATTTTGTGTTCTTTATTTTAAGTTTTTCTTTCTGCACTGTTCTTACTATGTGAACGGACTTGGTCCATTGACTTGTGGTGGACGCATGTAAGTCATCAGTCCAACATCTTGAGTTGTAAAATTGAGAATTTCCCGACCAACTTACTTGGGGATGCCCCTTGGAAACAATCATAAGGAGCTAGAAGTTTGGGATGAGATTATTGAAAAAATTAGTAACCAAACTCAAAATGTGTTGAGCGCTCGACTTGCTTTATGTGCGCTTCGGTGTCGTCACCAGTGTTCTAAGACATATTTTTCCTTGCCAATGTGTCTCTGCCGAAGAGGTGACACTAAACAATTGATATTTCACTTAATCACATTTTTTTTGAAAAGGTACTTTATCATTATTTTTTTCGATTTCTTCAGTCATATATTTGTTATTTGTGTTTATAATTATTCGTCTTGGACTCAGCATATATATTTGTAATTTTTTCTCCCTTTGTGCCTTTTTTCATTAAAGCCCATTCTTTGTTTGCACATAAAGGTCCAATGGGCCTTAGAGTTTTTTTGCGCTTTTCGCGTTTGATAACACTTGAAAAACTAGCCAATTGGAAAGCCCGATGTTTATCTCTTGGAGGAAGTAGTACTCTTATGAACTCAGTATTGGACTCATTGCCAACACATGTCATGTCCTTATTTCTAATGCCTTCAGGTGGAGGATACCATACAAGTTGAGGACTTTCTATGTTAGGTAATAAGGAGGGCAGAGGTATTCACTAAGTGAAATGCCAAACTGCTCAGCTTATGGTTGACTTGGTATTAGGAATCTGGGGCTTCAAAACAGATGCTTATTGACAAAATGGAGGTTTGTTGGTGAGGATCATGCACTCTGGAAGGAAGTAACTATAAAAATATGGGCAGAGTAACTATTTGTGTTCTAATATGGTCTATGTTGGCTGGGAATATAGACTGTAGTGTGTGGAATGACACCTAGATCCTTTTTCCGAGAGATAAATGGATTGGACTCGAGCCTTTAATGAGCTCATTTTCGGAACTGTTCTCATTTTGTAGCAACTCTGAAGCATCAATAGTTGACACTCTGGGTGTGTTTGTGTCACGACCCAAACCGGGTTGCGACTGGCACCCACACTTACCCTCCTATGTGAGCGAACCAACCAATCTAAACCTTAACATTTCAATGTAATAACAGTAGAAAATAATGCGGAAGACTTAACTCATTAATAAAATCAATTCAATAACTATCAATATTCAACATCTATTATTCCCAAAACCTGGAAGTCATCATCACAAGAACATCTACGATCAAATGACTAAACTAAGAGTATTCTAAAAGCTAAAAATACATAAGAAGCTAGTCCATGCCGGAAGTTCAAGGCATCAAGACTTGAAGAAGAAGATCCAGTCCAAGCTAGAAGCATTAGCTCACCCTGAATTTCCGATGTAGTAAGACTGGCTTGAATTACTGTTGAGTTGAAGACGATGGCACGTTTGCTGCACTCCACAAATAAACAAGAAGAAAACATAAAAGTAGGGGTCAGTACAAAACACGGGTACTGAGTAGATATCATCGGCCAACTCAAAATAGGGAACAGTATATATCAATATTATCGTAAATCAACTATAAAACTCAACATGTAGCCACAACAAGTATTATAATCATCAATAAGTACCATCAAGTTCATCCATGAGGGCTCAAGCCTCAACACCATACTCATTTGGGAATTATGTTCGTTAGATTGAGTATATTAACATCTTTCAAGATTCATTATCTTTAATTCTCTTGTGTCGGTACGTGACACTCCGATCCCTCATATTCATTATTCCTCTTGTGTCGGTACGTGACACTCTGATCCCCTATATCTACGTGTCGGTTCGTGACACCCGATCCCCTACATCATTCTGTAAATCATCAGGCCTTCTCTATACCAAGGTATCATCAATCCTATTACTTTAATTCATCAAGCCTTCTTCTATACCAAGGCATCATCATTAATAATGTATATTAAAGTTTCCTTTCAAGATTTGGGATTCAATATTTTCATCATGCTTATCTTATCACAATCACATAATCATATTCACGCAAACATACAATTAAGCTTATAGTAGGGTTTACAATACTACCAATACATATCATTCTCTATTAAGAGTTTACTATGAAAGCATGAAAACCATAACCTACCTCCACCGAAGAGTTGAATCAAGCAAGAATTTTCCCAAAGCTTTGTTTCTCCCTTCTCGTTCGATTTTCTCTCTCTCTCTTGTTCTTTCTATTTTCTTTATTCAAACCCTCTTTCTTTTACCCTAATTAGTATATAATTAAGAATAAAAGATGGCAATAATACCCCACTAATTAACTTAGGGTTACCTCTTTTAACCCCTCAAGAATTTGAGTTATTAATATAACCCCACGAACTTTATAATTAAGGCAAGAATAGTCAAAAACGTCCCTTAAAACTTAACCAGAAATCCGACTCTGCCTGGGATTTGCGCAACCTGTGACGGGCCGTCGTGCCTGCGACGGTCCGTCCTGCAGGTCGTCGCAGAGTTCAGAGACCCAAATTTCCACCAAGGGTCTGTGACGGTCCGTCACACCTGTGACGGTCCGTCCTGCCATTCCGTCACAAAGTTCAGAGAGTCGATTTTTAGTACCCAATTTCAGATTTTCTAAGTGTTTTGAAACGAGACCCTGCGACGGTCCCTCGTGCCCTTGACGGTCCGTCGTGGGGTCCGTCGCTTCTGCCAGTTTTTCCAGAATTGAAGTCTGTTGCTCAAAACGACTAAACGGGTCGTTACAGTTTGGTATGGAGGAAAATGTTTTCCATGGAAAATGTTTTCCTAGAAAATGTTTTCCTGGAAAACAAGTAAATTTTGGACTTATTTTCTCATGTTTGGTTGGTGAGTAGAAAATATTTTCTGGATATGATTTTTAGTGTTTGATTTATGAATGAAAAATGTTTTTGAGAGACATTTTTTATTTTTACTAGAGTAAAAAATAATTTATGATATTGAAAATATTTTTCAAAATCAAAATTATTATTTTTTTGGGTGGTGGTGGGGGTGGGGTGGGGGCAGGGCGGGGGGAGGGGGAGGGGATAGGAGTGAAAAAATAAAAATTTGAATTTGATAGTATTTTTAAAAAACAAAATTAATTTTTTTGGGGATTGGGGTGGGTGGGGGCTGGTAGGGGGGCTGGCCGGGAGTGGGGGGGAGGGGTAGGAGTTAAAAAATAAAAAATTTGAAGTTGAAAATATTTTTAAAAAGCAAAATTAATTTTTTGAGGAGGGGTTGGGGTTGGGGTTGGGGGGGGCTGGCCGGGGGTTAGGGTCAAGGATCTGGTGAAAAAATAAAATTTTGAAATTGAAAATATTTATTTAAATTGATGATTTTCCCAAAAAAAAGTAATTTGAAATTGGAGGTGAGTTATGGAAAATGTTTTCCTTAATTTTTGAAGGGAAGTCATTTTCCTTAATTTTGAGGAAAATGAGTTGATTTGGAAATCATTTTCCGAAACTTTTGTCCCAACCAAACATGTGGAAATTGGAAAACATTTTCCAGAAAATGTTTTCCTTCATACCAAACACACTCTCTGTCCCCTCAAGGTGGAATCTCACATTCAGAAGGCACTTGAATGATTGAGAAGTGGGTAGATTTGTTGAGTTATTACAAGTGCTTAGTGGTTTCTTAGGTTTATCTACAGGATCAGACACAATGAGGTGGGAACATGACAGTGATGACTAGTTCTTATTAAGAAGACTCTAGAGAAATGAAGTGGTGGAGCAACCAGGAAGGAGGGGACATACCAGGTCCTTGGAAACAGATTTGGAAGTGCAGTGTCCCAAACAAGGTGCACTTGGTTGGTGACCTGAAGAGCATGTCTCACTGATGAAAAATTGGAAAGGAGGGGCTTTCAGATGGTATCCAGATGTTTTGTTTTTGGGCTAGGAGAATGAAGAAACTAATAATCATCTTTTCTTCATTGGAAGATTGTATCACAGATCTGGTCTGTGTTTCCAAGTATATCTCGAGCAAATTGGGTAACGCCTGAACACATTGCTGACCTACTTAGCTGATGCATAAGGAGTGGAGGGAGGGAACAGAGTCAGAAGGGACGGTAAGATAATACCATATTGCATATAGTGGTCAGTATGGAGAGAAGAAACAACAGATGCTTTGAGGATATCTCTAACCCAATCTAGATAATCAAAGAAAATTGTATGAATATTTTGTATTTTTGATGTAAAGAAAGGGTTTAGAAATAGCAGAGCAGTTAGCAGATATTTTAGGATGTTTGTACATTTCTGAATTTTGCTCACCTGCACATGCAAATACTCTTTGATTTGTTACTTCTTAAAATTGGGAAATTGACAAGGTTTTCCACATGGTACAACACACGGCATGGAGTTTGGGCTGAAACAGCCCGTCATGTATCTAAGAATGTGAGAGCCGCTTTAATATAGAACTTTGGTTGGGTATGTCCGCTAGCTAGCCCTTTCAGTATTTGCGAGTTGCACACTTGTTCTGAATATAGCTCACCTGCACATCCATATACTCCTTTGATTTGTTACTTCTTGAAATTGAGAAATTGACAAGGTTTTCTACATGGTACACATGGCATGAAGTTTGGGCTGACACGGCCCATCACGTGTCTTTAAGAATGTGAACTTCCCTTTAATATAGAACTTTGTCTGGTATGTCTGTTAGCTAGCCCTTTCAGCATTTGCGAGTTGCACAGTTTTGTTCTGAATTCTGCTCACCTGCACATGCAAATATGCTTTGATTAGTTACTTCTTGAAATTGAGAAATTGACAAGGTTTTCCACATGATACACATGACATGAAGTTTTTTAGCTTGTCACTTGTCTAAGAATGTGAATGTGTCTCTTTAATATAGAACTTTGTCTTGTGTATCTGCTAGCTATCCCTTTCAACATTTGTGAGTTGCACACTTCTGTTCTGAATTTTGCTCACCTGCACATGCAAATACTCTTTGATTTGTTACTTCTTGAAATTGAGAAATTGACAAGATTTTTCACATGGTACACATGGCACTAATTTTGGGCTAAAACATCTGGTCATGTTACAAGAATGTGAAATGTCGCTTTAATATAGAACTTTGTCTGGTATGTCTGCTAGCTAGCCCTTTCAGCATTTGCATGTTGCACACTTCTGTTCTAAATTTCGCTCACCTGCACATGCAAATACTGGTTGATTTGTTACTTCTTGAAATTTAGAAATTTACAAGGTTTTCACATGGTACATATTTCATGAAGTATGGGCTGATACAGCCCGTCATGTGTCTAAGAATGTGAACGTCCCTTTAGTATAGAACTTTATCTGGTATGTCTGCTAGTTAGCCCTCCCCCATTTTCCTTCTTGAATGCCTCTCCTCATCCTAAAATGGAGACAAGAACACCAACTTGAATTTTCTTTACTTTAGTAGTCTTTTTTTTTCTTCATCTTGTTTGTGTTCATCTCTTGCTTGTTGCTCTTTTTGATAAGGTAATGTTTTAATTAATGATTGGAGAAATCCCATATACAAGCCATACACCAAAAAATAAAGAATGTAAACCAAAATATTGTTCTCTACGAAAGGAAAACCAATCATCTATAAAACAGGCACCTTATGGGTGGTGTCATCTTATTTGTATTCACGTCTTTGCTTGTTGCTTATGTAGTTTATACAATTGTTGTTTATGTTTTGATGCATCATTTCACTTCTTGTGGCTCTAATGATGCACTTGATTATATTGAACTAACAGGTTGGAGCAAAAGATCACCAGCGTTTCCAAGCATCTTATGCAATTTTGCTGAAGGCCCGGTTGACTGCACTAAAGAAGAGGGAGAGGAAGGACAAGAGGAAGGCTACTGATTCTGACAAAAAGATGGATATTTCGAAAAAGAAATCTGCTGCTGCTAAAGCCTCTACATGAAACTTTAGTCCTTTGGTTTATTCCCCCATTTTGTTTCTAGGATAGAGTTGTAGGATTTGAACCCCATCCATTTGGGGCGACAAGTCTGAAACTTCATTACAACTCCACTGCATAGAATGAAGAAAGGAGGTGTTTTTACTCAATTTGATTATTCACATCTAAATTAGTCAAACTTTTTAAAGAGCTTGTTGGGTTATGGAACAGTTGAAGGAATTTTGTCATAATCTTGATCTTTTAATTCCTTGAACAACAGCTTTGGCAATTGAAAGTAGATGGGACCAAATTAAAAGTAGTATGCCTACATACTTGAATGTCATGTCAACTGCATATGTCCATACTTTTTGGTTGTGGGAACTTAAAATGACATTTTTTTGCTTCTTTTTGTTCAACCAGTTCTTTTTCCACTGTTCCAAAACCAT</genome_strand>
        <mrna_strand>TTTCTTTGACCCATCGCTTCTCTTCATCGCTGTGTTGAAGTTTTGGTTTTTGAGTTTTGAGATTTGCTGTTCGAAGATG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCGATTACAGCCAGACCCATTCCTCAATGAACTGACGAGTATGTTTGAGCGAACTACTGAGCATGGTTCCGTTTGGGTTACGCTTAAACACT............................................................................................CTTCTGATAAATCTAAAGCCCAACGGAATAAGATGAAGACAGCTGGTGAAACTCTTGAATTTAAGTGCCTCATCCGAGCAACTGATGGGAAAAAGAATATTTCCACAATG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................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      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U318313" ref_strand="+" ref_description="SGN-U318313        Tomato 200607 #1 [2 ESTs aligned]">
      <seq>aagtttcatacttgtcgccccaaatggatggggttcaaatgctaccaactctatcctagaaacaaaatgggggaataaaccaaaggactaaagtttcatgtagaggctttagcagcagcagatttctttttcgaaatatccatctttttgtcagaatcagtagccttcctcttgtccttcctctccctcttctttagtgcaggcaaccgggccttcagcaaaattgcataagatgcttggaaacgctggtgatcttttgctcccacctgttagttcaatataatcaagtgcatcattagagccacaagaagtgaaatgatgcatcaaaacataaacaacaattgtataaactacataagcaacaagcaaagacgtgaatacaaataagatgacaccacccataaggtgagcgaaatttagaacagaagtgtgcaacatgcaaatgctgaaagggctagctaacagacataccagacaaagttctatattaaagggaagttcacattcttaaagacacgtgatgggccgtgtcagcccaaacttcatgccatgtgtaccatgtagaaaaccttgtcaatttctcaatttcaagaagtaacaaatcaaaggagtatatggatgtgcaggtgagctatattcagaacaagtgtgcaactcgcaaatactgaaagggctagctagcggacatacccaaccaaagttctatattaaagcggctctcacattcttagatacatgacgggctgtttcagcccaaactccatgccgggtgttgtaccatgtggaaaaccttgtcaatttcccaattttaagaagtaacaaaataaagaatatttgcttgtgcagcaaacgtgccatcggttttaactcaaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0167M06.1" temp_strand="-" temp_description="C06HBa0167M06.1  AC211057.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0167M06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="83053" stop="77894"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82753" g_stop="82350" g_length="404"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="405" r_length="405" r_score="0.985"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82349" i_stop="81916" i_length="434">
            <donor d_prob="0.774" d_score="1.00"/>
            <acceptor a_prob="0.988" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81915" g_stop="81868" g_length="48"/>
          <reference_exon_boundary r_type="cDNA" r_start="406" r_stop="453" r_length="48" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="81867" i_stop="81437" i_length="431">
            <donor d_prob="0.803" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="81436" g_stop="81044" g_length="393"/>
          <reference_exon_boundary r_type="cDNA" r_start="454" r_stop="846" r_length="393" r_score="0.987"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="81043" i_stop="78222" i_length="2822">
            <donor d_prob="0.907" d_score="0.92"/>
            <acceptor a_prob="0.965" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="78221" g_stop="78194" g_length="28"/>
          <reference_exon_boundary r_type="cDNA" r_start="847" r_stop="874" r_length="28" r_score="0.893"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0167M06.1" gen_strand="-" ref_id="SGN-U318313" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>873</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0167M06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U318313" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82753" e_stop="82350"/>
          <exon e_start="81915" e_stop="81868"/>
          <exon e_start="81436" e_stop="81044"/>
          <exon e_start="78221" e_stop="78194"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGTTTCAGACTTGTCGCCCCAAATGGATGGGGTTCAAATCCTA-CAACTCTATCCTAGAAACAAAATGGGGGAATAAACCAAAGGACTAAAGTTTCATGTAGAGGCTTTAGCAGCAGCAGATTTCTTTTTCGAAATATCCATCTTTTTGTCAGAATCAGTAGCCTTCCTCTTGTCCTTCCTCTCCCTCTTCTTTAGTGCAGTCAACCGGGCCTTCAGCAAAATTGCATAAGATGCTTGGAAACGCTGGTGATCTTTTGCTCCAACCTGTTAGTTCAATATAATCAAGTGCATCATTAGAGCCACAAGAAGTGAAATGATGCATCAAAACATAAACAACAATTGTATAAACTACATAAGCAACAAGCAAAGACGTGAATACAAATAAGATGACACCACCCATAAGGTGCCTGTTTTATAGATGATTGGTTTTCCTTTCGTAGAGAACAATATTTTGGTTTACATTCTTTATTTTTTGGTGTATGGCTTGTATATGGGATTTCTCCAATCATTAATTAAAACATTACCTTATCAAAAAGAGCAACAAGCAAGAGATGAACACAAACAAGATGAAGAAAAAAAAAGACTACTAAAGTAAAGAAAATTCAAGTTGGTGTTCTTGTCTCCATTTTAGGATGAGGAGAGGCATTCAAGAAGGAAAATGGGGGAGGGCTAACTAGCAGACATACCAGATAAAGTTCTATACTAAAGGGACGTTCACATTCTTAGACACATGACGGGCTGTATCAGCCCATACTTCATGAAATATGTACCATGTGAAAACCTTGTAAATTTCTAAATTTCAAGAAGTAACAAATCAACCAGTATTTGCATGTGCAGGTGAGCGAAATTTAGAACAGAAGTGTGCAACATGCAAATGCTGAAAGGGCTAGCTAGCAGACATACCAGACAAAGTTCTATATTAAAGCGACATTTCACATTCTTGTAACATGACCAGATGTTTTAGCCCAAAATTAGTGCCATGTGTACCATGTGAAAAATCTTGTCAATTTCTCAATTTCAAGAAGTAACAAATCAAAGAGTATTTGCATGTGCAGGTGAGCAAAATTCAGAACAGAAGTGTGCAACTCACAAATGTTGAAAGGGATAGCTAGCAGATACACAAGACAAAGTTCTATATTAAAGAGACACATTCACATTCTTAGACAAGTGACAAGCTAAAAAACTTCATGTCATGTGTATCATGTGGAAAACCTTGTCAATTTCTCAATTTCAAGAAGTAACTAATCAAAGCATATTTGCATGTGCAGGTGAGCAGAATTCAGAACAAAACTGTGCAACTCGCAAATGCTGAAAGGGCTAGCTAACAGACATACCAGACAAAGTTCTATATTAAAGGGAAGTTCACATTCTTAAAGACACGTGATGGGCCGTGTCAGCCCAAACTTCATGCCATGTGTACCATGTAGAAAACCTTGTCAATTTCTCAATTTCAAGAAGTAACAAATCAAAGGAGTATATGGATGTGCAGGTGAGCTATATTCAGAACAAGTGTGCAACTCGCAAATACTGAAAGGGCTAGCTAGCGGACATACCCAACCAAAGTTCTATATTAAAGCGGCTCTCACATTCTTAGATACATGACGGGCTGTTTCAGCCCAAACTCCATGCCGTGTGTTGTACCATGTGGAAAACCTTGTCAATTTCCCAATTTTAAGAAGTAACAAATCAAAGAGTATTTGCATGTGCAGGTGAGCAAAATTCAGAAATGTACAAACATCCTAAAATATCTGCTAACTGCTCTGCTATTTCTAAACCCTTTCTTTACATCAAAAATACAAAATATTCATACAATTTTCTTTGATTATCTAGATTGGGTTAGAGATATCCTCAAAGCATCTGTTGTTTCTTCTCTCCATACTGACCACTATATGCAATATGGTATTATCTTACCGTCCCTTCTGACTCTGTTCCCTCCCTCCACTCCTTATGCATCAGCTAAGTAGGTCAGCAATGTGTTCAGGCGTTACCCAATTTGCTCGAGATATACTTGGAAACACAGACCAGATCTGTGATACAATCTTCCAATGAAGAAAAGATGATTATTAGTTTCTTCATTCTCCTAGCCCAAAAACAAAACATCTGGATACCATCTGAAAGCCCCTCCTTTCCAATTTTTCATCAGTGAGACATGCTCTTCAGGTCACCAACCAAGTGCACCTTGTTTGGGACACTGCACTTCCAAATCTGTTTCCAAGGACCTGGTATGTCCCCTCCTTCCTGGTTGCTCCACCACTTCATTTCTCTAGAGTCTTCTTAATAAGAACTAGTCATCACTGTCATGTTCCCACCTCATTGTGTCTGATCCTGTAGATAAACCTAAGAAACCACTAAGCACTTGTAATAACTCAACAAATCTACCCACTTCTCAATCATTCAAGTGCCTTCTGAATGTGAGATTCCACCTTGAGGGGACAGAGAGTGTGTTTGGTATGAAGGAAAACATTTTCTGGAAAATGTTTTCCAATTTCCACATGTTTGGTTGGGACAAAAGTTTCGGAAAATGATTTCCAAATCAACTCATTTTCCTCAAAATTAAGGAAAATGACTTCCCTTCAAAAATTAAGGAAAACATTTTCCATAACTCACCTCCAATTTCAAATTACTTTTTTTTGGGAAAATCATCAATTTAAATAAATATTTTCAATTTCAAAATTTTATTTTTTCACCAGATCCTTGACCCTAACCCCCGGCCAGCCCCCCCCAACCCCAACCCCAACCCCTCCTCAAAAAATTAATTTTGCTTTTTAAAAATATTTTCAACTTCAAATTTTTTATTTTTTAACTCCTACCCCTCCCCCCCACTCCCGGCCAGCCCCCCTACCAGCCCCCACCCACCCCAATCCCCAAAAAAATTAATTTTGTTTTTTAAAAATACTATCAAATTCAAATTTTTATTTTTTCACTCCTATCCCCTCCCCCTCCCCCCGCCCTGCCCCCACCCCACCCCCACCACCACCCAAAAAAATAATAATTTTGATTTTGAAAAATATTTTCAATATCATAAATTATTTTTTACTCTAGTAAAAATAAAAAATGTCTCTCAAAAACATTTTTCATTCATAAATCAAACACTAAAAATCATATCCAGAAAATATTTTCTACTCACCAACCAAACATGAGAAAATAAGTCCAAAATTTACTTGTTTTCCAGGAAAACATTTTCTAGGAAAACATTTTCCATGGAAAACATTTTCCTCCATACCAAACTGTAACGACCCGTTTAGTCGTTTTGAGCAACAGACTTCAATTCTGGAAAAACTGGCAGAAGCGACGGACCCCACGACGGACCGTCAAGGGCACGAGGGACCGTCGCAGGGTCTCGTTTCAAAACACTTAGAAAATCTGAAATTGGGTACTAAAAATCGACTCTCTGAACTTTGTGACGGAATGGCAGGACGGACCGTCACAGGTGTGACGGACCGTCACAGACCCTTGGTGGAAATTTGGGTCTCTGAACTCTGCGACGACCTGCAGGACGGACCGTCGCAGGCACGACGGCCCGTCACAGGTTGCGCAAATCCCAGGCAGAGTCGGATTTCTGGTTAAGTTTTAAGGGACGTTTTTGACTATTCTTGCCTTAATTATAAAGTTCGTGGGGTTATATTAATAACTCAAATTCTTGAGGGGTTAAAAGAGGTAACCCTAAGTTAATTAGTGGGGTATTATTGCCATCTTTTATTCTTAATTATATACTAATTAGGGTAAAAGAAAGAGGGTTTGAATAAAGAAAATAGAAAGAACAAGAGAGAGAGAGAAAATCGAACGAGAAGGGAGAAACAAAGCTTTGGGAAAATTCTTGCTTGATTCAACTCTTCGGTGGAGGTAGGTTATGGTTTTCATGCTTTCATAGTAAACTCTTAATAGAGAATGATATGTATTGGTAGTATTGTAAACCCTACTATAAGCTTAATTGTATGTTTGCGTGAATATGATTATGTGATTGTGATAAGATAAGCATGATGAAAATATTGAATCCCAAATCTTGAAAGGAAACTTTAATATACATTATTAATGATGATGCCTTGGTATAGAAGAAGGCTTGATGAATTAAAGTAATAGGATTGATGATACCTTGGTATAGAGAAGGCCTGATGATTTACAGAATGATGTAGGGGATCGGGTGTCACGAACCGACACGTAGATATAGGGGATCAGAGTGTCACGTACCGACACAAGAGGAATAATGAATATGAGGGATCGGAGTGTCACGTACCGACACAAGAGAATTAAAGATAATGAATCTTGAAAGATGTTAATATACTCAATCTAACGAACATAATTCCCAAATGAGTATGGTGTTGAGGCTTGAGCCCTCATGGATGAACTTGATGGTACTTATTGATGATTATAATACTTGTTGTGGCTACATGTTGAGTTTTATAGTTGATTTACGATAATATTGATATATACTGTTCCCTATTTTGAGTTGGCCGATGATATCTACTCAGTACCCGTGTTTTGTACTGACCCCTACTTTTATGTTTTCTTCTTGTTTATTTGTGGAGTGCAGCAAACGTGCCATCGTCTTCAACTCAACA</genome_strand>
        <mrna_strand>AAGTTTCATACTTGTCGCCCCAAATGGATGGGGTTCAAATGCTACCAACTCTATCCTAGAAACAAAATGGGGGAATAAACCAAAGGACTAAAGTTTCATGTAGAGGCTTTAGCAGCAGCAGATTTCTTTTTCGAAATATCCATCTTTTTGTCAGAATCAGTAGCCTTCCTCTTGTCCTTCCTCTCCCTCTTCTTTAGTGCAGGCAACCGGGCCTTCAGCAAAATTGCATAAGATGCTTGGAAACGCTGGTGATCTTTTGCTCCCACCTGTTAGTTCAATATAATCAAGTGCATCATTAGAGCCACAAGAAGTGAAATGATGCATCAAAACATAAACAACAATTGTATAAACTACATAAGCAACAAGCAAAGACGTGAATACAAATAAGATGACACCACCCATAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAGCGAAATTTAGAACAGAAGTGTGCAACATGCAAATGCTGAAAGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................GCTAGCTAACAGACATACCAGACAAAGTTCTATATTAAAGGGAAGTTCACATTCTTAAAGACACGTGATGGGCCGTGTCAGCCCAAACTTCATGCCATGTGTACCATGTAGAAAACCTTGTCAATTTCTCAATTTCAAGAAGTAACAAATCAAAGGAGTATATGGATGTGCAGGTGAGCTATATTCAGAACAAGTGTGCAACTCGCAAATACTGAAAGGGCTAGCTAGCGGACATACCCAACCAAAGTTCTATATTAAAGCGGCTCTCACATTCTTAGATACATGACGGGCTGTTTCAGCCCAAACTCCATGCCGGGTGTTGTACCATGTGGAAAACCTTGTCAATTTCCCAATTTTAAGAAGTAACAAAATAAAGAATATTTGCTTGTGCAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAACGTGCCATCGGTTTTAACTCAACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U328752" ref_strand="+" ref_description="SGN-U328752        Tomato 200607 #1 [3 ESTs aligned] arabidopsis/peptide: AT3G54420.1 | Symbol: None | class IV chitinase (CHIV), almost identical to class IV chitinase from GI:2597826 (Arabidopsis thaliana) | chr3:20156888-20158041 FORWARD | Aliases: T14E10.4 (evalue: 5e-71, score=264) genbank/nr: OSJNBb0091E11.8(evalue: 3e-75, score=284)">
      <seq>tcaatttttttttaaaaaaaaatgataaatttttcttcaagaattttgttgattttgttattaacatgtactatagctataattataattccaaaattggcttctacacaatattgtggatgtacagaaggattgtgttgcagtagatggggttattgtggcagtggaaaagcttattgtggacaaggttgtcaaggagggccttgttataattcttcaaccaaaaattacaatcataatattaataacaataataataataataccaatagagtttctgatattgttagtgaatcatttttcaatggaattgcaaatcaagctgcttcaaattgtgaaggcaaaggattttacacgagatctgtatttcttgaagctttaaagtcttatcctgaattcgcaactatcggtttttctgatgatgataataagcgcgaaattgctgctttctttgctcatgtcacacatgagaccggacaaatgtgttacataaatgagataaatggttcatctagggactattgtgacatgacaaactcagagtacccctgtgtttctggccaaaattattatggtagaggaccaatacaactatcatggaacttcaactatggtcctgctggaaaagacatcggattcgatgggcttaacgaccccgatattgtgtctagagacagtttaatatcattcaaaactgccctgtggtactggatgaacacttgccaacctctcttaagttctgggcaaggtttcggggcaacgattcgagctattaatggtcctcttga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0167M06-FMABi/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0167M06.1" temp_strand="+" temp_description="C06HBa0167M06.1  AC211057.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0167M06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="84244" stop="86236"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="84544" g_stop="85021" g_length="478"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="478" r_length="478" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="85022" i_stop="85626" i_length="605">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="85627" g_stop="85936" g_length="310"/>
          <reference_exon_boundary r_type="cDNA" r_start="479" r_stop="788" r_length="310" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0167M06.1" gen_strand="+" ref_id="SGN-U328752" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>788</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0167M06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U328752" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="84544" e_stop="85021"/>
          <exon e_start="85627" e_stop="85936"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAATTTTTTTTTAAAAAAAAATGATAAATTTTTCTTCAAGAATTTTGTTGATTTTGTTATTAACATGTACTATAGCTATAATTATAATTCCAAAATTGGCTTCTACACAATATTGTGGATGTACAGAAGGATTGTGTTGCAGTAGATGGGGTTATTGTGGCAGTGGAAAAGCTTATTGTGGACAAGGTTGTCAAGGAGGGCCTTGTTATAATTCTTCAACCAAAAATTACAATCATAATATTAATAACAATAATAATAATAATACCAATAGAGTTTCTGATATTGTTAGTGAATCATTTTTCAATGGAATTGCAAATCAAGCTGCTTCAAATTGTGAAGGCAAAGGATTTTACACGAGATCTGTATTTCTTGAAGCTTTAAAGTCTTATCCTGAATTCGCAACTATCGGTTTTTCTGATGATGATAATAAGCGCGAAATTGCTGCTTTCTTTGCTCATGTCACACATGAGACCGGACGTGAGTCATTTTTCTTAAATTTTTATATCATATGCTTAATTTTAGTATCTATCTTTGTTTTTTTTTTTATATAAAAAAAAAACACTTTTCTTGGATTCTTCATGTGATATGTCTTGTCAATTATGAACCATCTAACTATATGAGTATTAAACTTAATATTTTATATATTCTAGGAAAAATGTACAAGTATTTCCTAGATTATGATCGAAATTTCTGAGACATATCTTAACTAAATTCATATCTTAACTAAAATAAGGTCCTGTTACTCTCATTAACTTATTTTTTTGGTAATTTTATGCACTTTTTGGCTTACGTCGCATCAAAACATCTCTCACGCACCTCAATTGCGTGGAGTCACGGAGTGTGCCACGTAAGACAAAAGGTGCACAAAAATTACAAAAAGATAAGTTTAGGAAGGTAATAGGACTTTAGTTTACTTAAGGTGTGTATCTGAAATTCCGATCATAGTCTAGGGGGATATCTGTGCATTTTCACATATATTTAAGCAAAAGTTATTAAGTTTGATCGAATCTGTGCCTGGGCTTATACCAACATTTTTCACACCTACAATATGACAAGTAACAGTATAGTTTTATGATATGCAGAAATGTGTTACATAAATGAGATAAATGGTTCATCTAGGGACTATTGTGACATGACAAACTCAGAGTACCCCTGTGTTTCTGGCCAAAATTATTATGGTAGAGGACCAATACAACTATCATGGAACTTCAACTATGGTCCTGCTGGAAAAGACATCGGATTCGATGGGCTTAACGACCCCGATATTGTGTCTAGAGACAGTTTAATATCATTCAAAACTGCCCTGTGGTACTGGATGAACACTTGCCAACCTCTCTTAAGTTCTGGGCAAGGTTTCGGGGCAACGATTCGAGCTATTAATGGTCCTCTTGA</genome_strand>
        <mrna_strand>TCAATTTTTTTTTAAAAAAAAATGATAAATTTTTCTTCAAGAATTTTGTTGATTTTGTTATTAACATGTACTATAGCTATAATTATAATTCCAAAATTGGCTTCTACACAATATTGTGGATGTACAGAAGGATTGTGTTGCAGTAGATGGGGTTATTGTGGCAGTGGAAAAGCTTATTGTGGACAAGGTTGTCAAGGAGGGCCTTGTTATAATTCTTCAACCAAAAATTACAATCATAATATTAATAACAATAATAATAATAATACCAATAGAGTTTCTGATATTGTTAGTGAATCATTTTTCAATGGAATTGCAAATCAAGCTGCTTCAAATTGTGAAGGCAAAGGATTTTACACGAGATCTGTATTTCTTGAAGCTTTAAAGTCTTATCCTGAATTCGCAACTATCGGTTTTTCTGATGATGATAATAAGCGCGAAATTGCTGCTTTCTTTGCTCATGTCACACATGAGACCGGAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATGTGTTACATAAATGAGATAAATGGTTCATCTAGGGACTATTGTGACATGACAAACTCAGAGTACCCCTGTGTTTCTGGCCAAAATTATTATGGTAGAGGACCAATACAACTATCATGGAACTTCAACTATGGTCCTGCTGGAAAAGACATCGGATTCGATGGGCTTAACGACCCCGATATTGTGTCTAGAGACAGTTTAATATCATTCAAAACTGCCCTGTGGTACTGGATGAACACTTGCCAACCTCTCTTAAGTTCTGGGCAAGGTTTCGGGGCAACGATTCGAGCTATTAATGGTCCTCTTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>9</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="-" PGL_start="34828" PGL_stop="24923"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="34828" e_stop="34089"/>
            <exon e_start="33111" e_stop="32898"/>
            <exon e_start="32816" e_stop="32736"/>
            <exon e_start="32230" e_stop="32138"/>
            <exon e_start="32052" e_stop="31966"/>
            <exon e_start="29181" e_stop="29081"/>
            <exon e_start="28615" e_stop="28582"/>
            <exon e_start="28504" e_stop="28430"/>
            <exon e_start="27685" e_stop="27602"/>
            <exon e_start="27503" e_stop="27369"/>
            <exon e_start="26066" e_stop="25921"/>
            <exon e_start="25338" e_stop="24923"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.989" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.928" acc_prob="0.996" e_score="0.986"/>
          <exon-intron don_prob="0.903" acc_prob="0.768" e_score="1.000"/>
          <exon-intron don_prob="0.851" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.988" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.984" e_score="1.000"/>
          <exon-intron don_prob="0.989" acc_prob="0.668" e_score="1.000"/>
          <exon-intron don_prob="0.985" acc_prob="0.924" e_score="1.000"/>
          <exon-intron don_prob="0.957" acc_prob="0.667" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.979" e_score="1.000"/>
          <exon-only e_score="0.993"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="34828" e_stop="34089" e_length="740"/>
          </exon>
          <intron i_serial="1" don_prob="0.989" acc_prob="0.997">
            <gDNA_intron_boundary i_start="34088" i_stop="33112" i_length="977"/>
          </intron>
          <exon e_serial="2" e_score="0.986">
            <gDNA_exon_boundary e_start="33111" e_stop="32898" e_length="214"/>
          </exon>
          <intron i_serial="2" don_prob="0.928" acc_prob="0.996">
            <gDNA_intron_boundary i_start="32897" i_stop="32817" i_length="81"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="32816" e_stop="32736" e_length="81"/>
          </exon>
          <intron i_serial="3" don_prob="0.903" acc_prob="0.768">
            <gDNA_intron_boundary i_start="32735" i_stop="32231" i_length="505"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="32230" e_stop="32138" e_length="93"/>
          </exon>
          <intron i_serial="4" don_prob="0.851" acc_prob="0.999">
            <gDNA_intron_boundary i_start="32137" i_stop="32053" i_length="85"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="32052" e_stop="31966" e_length="87"/>
          </exon>
          <intron i_serial="5" don_prob="0.999" acc_prob="0.988">
            <gDNA_intron_boundary i_start="31965" i_stop="29182" i_length="2784"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="29181" e_stop="29081" e_length="101"/>
          </exon>
          <intron i_serial="6" don_prob="0.999" acc_prob="0.984">
            <gDNA_intron_boundary i_start="29080" i_stop="28616" i_length="465"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="28615" e_stop="28582" e_length="34"/>
          </exon>
          <intron i_serial="7" don_prob="0.989" acc_prob="0.668">
            <gDNA_intron_boundary i_start="28581" i_stop="28505" i_length="77"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="28504" e_stop="28430" e_length="75"/>
          </exon>
          <intron i_serial="8" don_prob="0.985" acc_prob="0.924">
            <gDNA_intron_boundary i_start="28429" i_stop="27686" i_length="744"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="27685" e_stop="27602" e_length="84"/>
          </exon>
          <intron i_serial="9" don_prob="0.957" acc_prob="0.667">
            <gDNA_intron_boundary i_start="27601" i_stop="27504" i_length="98"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="27503" e_stop="27369" e_length="135"/>
          </exon>
          <intron i_serial="10" don_prob="0.998" acc_prob="0.999">
            <gDNA_intron_boundary i_start="27368" i_stop="26067" i_length="1302"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="26066" e_stop="25921" e_length="146"/>
          </exon>
          <intron i_serial="11" don_prob="0.994" acc_prob="0.979">
            <gDNA_intron_boundary i_start="25920" i_stop="25339" i_length="582"/>
          </intron>
          <exon e_serial="12" e_score="0.993">
            <gDNA_exon_boundary e_start="25338" e_stop="24923" e_length="416"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34828" stop="34089"/>
              <exon start="33111" stop="32898"/>
              <exon start="32816" stop="32736"/>
              <exon start="32230" stop="32138"/>
              <exon start="32052" stop="31966"/>
              <exon start="29181" stop="29081"/>
              <exon start="28615" stop="28582"/>
              <exon start="28504" stop="28430"/>
              <exon start="27685" stop="27602"/>
              <exon start="27503" stop="27369"/>
              <exon start="26066" stop="25921"/>
              <exon start="25338" stop="24923"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U313457" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25304" stop="24923"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U313458" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TCTCTTACTTGAATTTTCAGTCTCTTCTCCCAGCCGCCATTAAAACCAGCACTCGCAAACTCCAATTTCTCTTCTCCGGCAATGGCGTCTATCACCGCAAATCATCCAATCTCCGGTAAACCATTAATCTCATTCCGTCCCAAAAACCCTTTACTTCAAACCCAAACTCTCTTCAATTTCAAACCATCAATCTCCAAGCACTCCAATTCTTCATTTTCCATTCCCGTTGTCCGCTGCTCAATCCGCCGTAGACCGGAATATACTCCGAGTCACATTCCCGATCCAAACTATGTCCGGATATTCGACACCACTCTCCGTGATGGCGAACAATCACCAGGGGCTACAATGACTACAAAGGAGAAACTGGATGTTGCACGTCAGTTAGCTAAGCTTGGTGTTGATATAATTGAGGCTGGTTTTCCTGCTTCTTCTGAAGCTGATCTTGAAGCTGTGAAATTGATAGCTAAGGAAGTTGGGAATGGTGTTTATGAAGAGGGATATGTTCCGGTTATTTGTGGATTGGCGAGGTGTAATAAGAAGGATATTGATAAGGCGTGGGAGGCTGTGAAGTATGCTAAGAAACCGAGGATTCATACGTTTATTGCTACAAGTGAGATACATATGAATTATAAGCTGAAAATGAGTAGAGATCAAGTTGTTGAGAAAGCTAGGAGTATGGTGGCTTATGCAAGGAGTATTGGGTGTGAGGATGTTGAATTTAGCCCTGAAGATGCTGGAAG : ATCTGATCCAGAGTTTCTTTATCATATCCTTGGAGAGGTTATCAAAGCTGGGGCAACAACCCTTAACATCCCTGATACTGTTGGATACACTGTACCCGAAGAATTTGGACAATTGATTGCTAAAATAAAAGCGAATACCCCAGGAGTTGAAGATGTGATCATTTCAACACACTGCCAGAACGATCTTGGGCTTTCTACTGCCAACACCTTAGCT : GGAGCATGTGCAGGTGCAAGACAATTGGAAGTGACCATCAATGGAATTGGTGAAAGAGCTGGAAATGCTTCTTTAGAGGAG : GTTGTAATGGCCTTAAAGTGTCGTGGAGAGCAAGTACTAGGTGGCCTATATACAGGGATTAATACACAACATATACTCATGTCAAGCAAGATG : GTAGAGGAGTATTCCGGACTTCATGTGCAGCCACACAAAGCCATTGTTGGAGCTAATGCCTTTGCTCATGAAAGTGGCATCCATCAG : GATGGAATGTTAAAACACAAAGATACATATGAGATTATATCTCCTGAAGATATTGGGCTTAATCGTGCTAATGAATCTGGTATTGTCCTTGGGAAACTCAG : TGGGCGTCATGCTTTGCAAGCCAAAATGCTTGAG : CTTGGATACGAGATTGAGGGCAAAGAACTTGATGACCTGTTCTGGCGATTCAAATCTGTGGCTGAGAAGAAAAAG : AAAATTACAGATGATGACCTGGTAGCACTGATGTCAGATGAGGTTTTCCAGCCTCAATTTGTGTGGCAACTTCAAAATGTACAG : GTTACTTCTGGAAGTCTTGGCCTTTCTACAGCAACTGTTAAGCTCATTGATGCTGATGGTCGAGAGCATATTTCTTGTTCTGTTGGAACGGGGCCAGTTGACGCGGCTTATAAGGCAGTTGATCTCATTGTTAAG : GTACCTGTAACACTCCTTGAGTATTCCATGAATGCAGTCACACAAGGTATAGATGCTATAGCTTCAACCAGAGTCTTAATTCGTGGAGAAAATGGCCATACATCAACCCATGCCGTAACTGGAGAGACTATTCACCGTACATTTAG : TGGAACCGGAGCAGATATGGATATTGTCATCTCCAGTGTCCGAGCCTATGTTGGTGCATTGAATAAGATGATGAGTTTCAGAAAACTAATGGCGAAAAATAACAAACCCGAAAGCAGTGCAGTCGTATAGGTACTTCTGTGCAAATCAAGGTTATGGAACTTTTGCAACTGCACTGGAGCTTTATCATTTGTACAAAATGTAGGAGTCTGTTCAAAGAATTTGAGCCTGTAGTTTTCAAGAAAACAAAGCTTAATATGTCTGGTAGTGCTTGAAAATCATCTAAGTTTATGGTGTATCAGTTGGAACATTAGACACATTGTCCATATAACTTTGTTCATGCTCCCGTTTAACTAATTTATGAATCTACATACCACGCAAGATTTTCGAAATGATTTCAGAAATTATGAAAATCTCT</gDNA_template>
            <first_frame> S  L  T  *  I  F  S  L  F  S  Q  P  P  L  K  P  A  L  A  N  S  N  F  S  S  P  A  M  A  S  I  T  A  N  H  P  I  S  G  K  P  L  I  S  F  R  P  K  N  P  L  L  Q  T  Q  T  L  F  N  F  K  P  S  I  S  K  H  S  N  S  S  F  S  I  P  V  V  R  C  S  I  R  R  R  P  E  Y  T  P  S  H  I  P  D  P  N  Y  V  R  I  F  D  T  T  L  R  D  G  E  Q  S  P  G  A  T  M  T  T  K  E  K  L  D  V  A  R  Q  L  A  K  L  G  V  D  I  I  E  A  G  F  P  A  S  S  E  A  D  L  E  A  V  K  L  I  A  K  E  V  G  N  G  V  Y  E  E  G  Y  V  P  V  I  C  G  L  A  R  C  N  K  K  D  I  D  K  A  W  E  A  V  K  Y  A  K  K  P  R  I  H  T  F  I  A  T  S  E  I  H  M  N  Y  K  L  K  M  S  R  D  Q  V  V  E  K  A  R  S  M  V  A  Y  A  R  S  I  G  C  E  D  V  E  F  S  P  E  D  A  G  R :   S  D  P  E  F  L  Y  H  I  L  G  E  V  I  K  A  G  A  T  T  L  N  I  P  D  T  V  G  Y  T  V  P  E  E  F  G  Q  L  I  A  K  I  K  A  N  T  P  G  V  E  D  V  I  I  S  T  H  C  Q  N  D  L  G  L  S  T  A  N  T  L  A  :  G  A  C  A  G  A  R  Q  L  E  V  T  I  N  G  I  G  E  R  A  G  N  A  S  L  E  E  :  V  V  M  A  L  K  C  R  G  E  Q  V  L  G  G  L  Y  T  G  I  N  T  Q  H  I  L  M  S  S  K  M  :  V  E  E  Y  S  G  L  H  V  Q  P  H  K  A  I  V  G  A  N  A  F  A  H  E  S  G  I  H  Q  :  D  G  M  L  K  H  K  D  T  Y  E  I  I  S  P  E  D  I  G  L  N  R  A  N  E  S  G  I  V  L  G  K  L  S :   G  R  H  A  L  Q  A  K  M  L  E  :  L  G  Y  E  I  E  G  K  E  L  D  D  L  F  W  R  F  K  S  V  A  E  K  K  K  :  K  I  T  D  D  D  L  V  A  L  M  S  D  E  V  F  Q  P  Q  F  V  W  Q  L  Q  N  V  Q  :  V  T  S  G  S  L  G  L  S  T  A  T  V  K  L  I  D  A  D  G  R  E  H  I  S  C  S  V  G  T  G  P  V  D  A  A  Y  K  A  V  D  L  I  V  K  :  V  P  V  T  L  L  E  Y  S  M  N  A  V  T  Q  G  I  D  A  I  A  S  T  R  V  L  I  R  G  E  N  G  H  T  S  T  H  A  V  T  G  E  T  I  H  R  T  F  S :   G  T  G  A  D  M  D  I  V  I  S  S  V  R  A  Y  V  G  A  L  N  K  M  M  S  F  R  K  L  M  A  K  N  N  K  P  E  S  S  A  V  V  *  V  L  L  C  K  S  R  L  W  N  F  C  N  C  T  G  A  L  S  F  V  Q  N  V  G  V  C  S  K  N  L  S  L  *  F  S  R  K  Q  S  L  I  C  L  V  V  L  E  N  H  L  S  L  W  C  I  S  W  N  I  R  H  I  V  H  I  T  L  F  M  L  P  F  N  *  F  M  N  L  H  T  T  Q  D  F  R  N  D  F  R  N  Y  E  N  L  </first_frame>
            <second_frame>  L  L  L  E  F  S  V  S  S  P  S  R  H  *  N  Q  H  S  Q  T  P  I  S  L  L  R  Q  W  R  L  S  P  Q  I  I  Q  S  P  V  N  H  *  S  H  S  V  P  K  T  L  Y  F  K  P  K  L  S  S  I  S  N  H  Q  S  P  S  T  P  I  L  H  F  P  F  P  L  S  A  A  Q  S  A  V  D  R  N  I  L  R  V  T  F  P  I  Q  T  M  S  G  Y  S  T  P  L  S  V  M  A  N  N  H  Q  G  L  Q  *  L  Q  R  R  N  W  M  L  H  V  S  *  L  S  L  V  L  I  *  L  R  L  V  F  L  L  L  L  K  L  I  L  K  L  *  N  *  *  L  R  K  L  G  M  V  F  M  K  R  D  M  F  R  L  F  V  D  W  R  G  V  I  R  R  I  L  I  R  R  G  R  L  *  S  M  L  R  N  R  G  F  I  R  L  L  L  Q  V  R  Y  I  *  I  I  S  *  K  *  V  E  I  K  L  L  R  K  L  G  V  W  W  L  M  Q  G  V  L  G  V  R  M  L  N  L  A  L  K  M  L  E   : D  L  I  Q  S  F  F  I  I  S  L  E  R  L  S  K  L  G  Q  Q  P  L  T  S  L  I  L  L  D  T  L  Y  P  K  N  L  D  N  *  L  L  K  *  K  R  I  P  Q  E  L  K  M  *  S  F  Q  H  T  A  R  T  I  L  G  F  L  L  P  T  P  *  L :   E  H  V  Q  V  Q  D  N  W  K  *  P  S  M  E  L  V  K  E  L  E  M  L  L  *  R  R :   L  *  W  P  *  S  V  V  E  S  K  Y  *  V  A  Y  I  Q  G  L  I  H  N  I  Y  S  C  Q  A  R  W :   *  R  S  I  P  D  F  M  C  S  H  T  K  P  L  L  E  L  M  P  L  L  M  K  V  A  S  I  R :   M  E  C  *  N  T  K  I  H  M  R  L  Y  L  L  K  I  L  G  L  I  V  L  M  N  L  V  L  S  L  G  N  S   : V  G  V  M  L  C  K  P  K  C  L  S :   L  D  T  R  L  R  A  K  N  L  M  T  C  S  G  D  S  N  L  W  L  R  R  K  R :   K  L  Q  M  M  T  W  *  H  *  C  Q  M  R  F  S  S  L  N  L  C  G  N  F  K  M  Y  R :   L  L  L  E  V  L  A  F  L  Q  Q  L  L  S  S  L  M  L  M  V  E  S  I  F  L  V  L  L  E  R  G  Q  L  T  R  L  I  R  Q  L  I  S  L  L  R :   Y  L  *  H  S  L  S  I  P  *  M  Q  S  H  K  V  *  M  L  *  L  Q  P  E  S  *  F  V  E  K  M  A  I  H  Q  P  M  P  *  L  E  R  L  F  T  V  H  L   : V  E  P  E  Q  I  W  I  L  S  S  P  V  S  E  P  M  L  V  H  *  I  R  *  *  V  S  E  N  *  W  R  K  I  T  N  P  K  A  V  Q  S  Y  R  Y  F  C  A  N  Q  G  Y  G  T  F  A  T  A  L  E  L  Y  H  L  Y  K  M  *  E  S  V  Q  R  I  *  A  C  S  F  Q  E  N  K  A  *  Y  V  W  *  C  L  K  I  I  *  V  Y  G  V  S  V  G  T  L  D  T  L  S  I  *  L  C  S  C  S  R  L  T  N  L  *  I  Y  I  P  R  K  I  F  E  M  I  S  E  I  M  K  I  S </second_frame>
            <third_frame>   S  Y  L  N  F  Q  S  L  L  P  A  A  I  K  T  S  T  R  K  L  Q  F  L  F  S  G  N  G  V  Y  H  R  K  S  S  N  L  R  *  T  I  N  L  I  P  S  Q  K  P  F  T  S  N  P  N  S  L  Q  F  Q  T  I  N  L  Q  A  L  Q  F  F  I  F  H  S  R  C  P  L  L  N  P  P  *  T  G  I  Y  S  E  S  H  S  R  S  K  L  C  P  D  I  R  H  H  S  P  *  W  R  T  I  T  R  G  Y  N  D  Y  K  G  E  T  G  C  C  T  S  V  S  *  A  W  C  *  Y  N  *  G  W  F  S  C  F  F  *  S  *  S  *  S  C  E  I  D  S  *  G  S  W  E  W  C  L  *  R  G  I  C  S  G  Y  L  W  I  G  E  V  *  *  E  G  Y  *  *  G  V  G  G  C  E  V  C  *  E  T  E  D  S  Y  V  Y  C  Y  K  *  D  T  Y  E  L  *  A  E  N  E  *  R  S  S  C  *  E  S  *  E  Y  G  G  L  C  K  E  Y  W  V  *  G  C  *  I  *  P  *  R  C  W  K  :  I  *  S  R  V  S  L  S  Y  P  W  R  G  Y  Q  S  W  G  N  N  P  *  H  P  *  Y  C  W  I  H  C  T  R  R  I  W  T  I  D  C  *  N  K  S  E  Y  P  R  S  *  R  C  D  H  F  N  T  L  P  E  R  S  W  A  F  Y  C  Q  H  L  S   : W  S  M  C  R  C  K  T  I  G  S  D  H  Q  W  N  W  *  K  S  W  K  C  F  F  R  G   : G  C  N  G  L  K  V  S  W  R  A  S  T  R  W  P  I  Y  R  D  *  Y  T  T  Y  T  H  V  K  Q  D   : G  R  G  V  F  R  T  S  C  A  A  T  Q  S  H  C  W  S  *  C  L  C  S  *  K  W  H  P  S   : G  W  N  V  K  T  Q  R  Y  I  *  D  Y  I  S  *  R  Y  W  A  *  S  C  *  *  I  W  Y  C  P  W  E  T  Q  :  W  A  S  C  F  A  S  Q  N  A  *   : A  W  I  R  D  *  G  Q  R  T  *  *  P  V  L  A  I  Q  I  C  G  *  E  E  K   : E  N  Y  R  *  *  P  G  S  T  D  V  R  *  G  F  P  A  S  I  C  V  A  T  S  K  C  T   : G  Y  F  W  K  S  W  P  F  Y  S  N  C  *  A  H  *  C  *  W  S  R  A  Y  F  L  F  C  W  N  G  A  S  *  R  G  L  *  G  S  *  S  H  C  *   : G  T  C  N  T  P  *  V  F  H  E  C  S  H  T  R  Y  R  C  Y  S  F  N  Q  S  L  N  S  W  R  K  W  P  Y  I  N  P  C  R  N  W  R  D  Y  S  P  Y  I  *  :  W  N  R  S  R  Y  G  Y  C  H  L  Q  C  P  S  L  C  W  C  I  E  *  D  D  E  F  Q  K  T  N  G  E  K  *  Q  T  R  K  Q  C  S  R  I  G  T  S  V  Q  I  K  V  M  E  L  L  Q  L  H  W  S  F  I  I  C  T  K  C  R  S  L  F  K  E  F  E  P  V  V  F  K  K  T  K  L  N  M  S  G  S  A  *  K  S  S  K  F  M  V  Y  Q  L  E  H  *  T  H  C  P  Y  N  F  V  H  A  P  V  *  L  I  Y  E  S  T  Y  H  A  R  F  S  K  *  F  Q  K  L  *  K  S   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0167M06.1" strand="-"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="34816" stop="34089"/>
                    <exon start="33111" stop="32898"/>
                    <exon start="32816" stop="32736"/>
                    <exon start="32230" stop="32138"/>
                    <exon start="32052" stop="31966"/>
                    <exon start="29181" stop="29081"/>
                    <exon start="28615" stop="28582"/>
                    <exon start="28504" stop="28430"/>
                    <exon start="27685" stop="27602"/>
                    <exon start="27503" stop="27369"/>
                    <exon start="26066" stop="25921"/>
                    <exon start="25338" stop="25209"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1905</number_coding_nucleotides>
                  <number_encoded_amino_acids>635</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IFSLFSQPPLKPALANSNFSSPAMASITANHPISGKPLISFRPKNPLLQTQTLFNFKPSISKHSNSSFSIPVVRCSIRRRPEYTPSHIPDPNYVRIFDTTLRDGEQSPGATMTTKEKLDVARQLAKLGVDIIEAGFPASSEADLEAVKLIAKEVGNGVYEEGYVPVICGLARCNKKDIDKAWEAVKYAKKPRIHTFIATSEIHMNYKLKMSRDQVVEKARSMVAYARSIGCEDVEFSPEDAGRSDPEFLYHILGEVIKAGATTLNIPDTVGYTVPEEFGQLIAKIKANTPGVEDVIISTHCQNDLGLSTANTLAGACAGARQLEVTINGIGERAGNASLEEVVMALKCRGEQVLGGLYTGINTQHILMSSKMVEEYSGLHVQPHKAIVGANAFAHESGIHQDGMLKHKDTYEIISPEDIGLNRANESGIVLGKLSGRHALQAKMLELGYEIEGKELDDLFWRFKSVAEKKKKITDDDLVALMSDEVFQPQFVWQLQNVQVTSGSLGLSTATVKLIDADGREHISCSVGTGPVDAAYKAVDLIVKVPVTLLEYSMNAVTQGIDAIASTRVLIRGENGHTSTHAVTGETIHRTFSGTGADMDIVISSVRAYVGALNKMMSFRKLMAKNNKPESSAVV*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="+" PGL_start="52777" PGL_stop="54466"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="52777" e_stop="54466"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.997">
            <gDNA_exon_boundary e_start="52777" e_stop="54466" e_length="1690"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52777" stop="54466"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U320128" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TAGTCCCGACAAGAGACCACAATTGTAATTTTTGCATTTGCTTGCGTATGTCACTCCAGAGGAGCCTCGACTCTTCTTCACAAGCGAAACAACTAAAACCCCTCTTTCTAATTACATTGATTTTCTAGCAACATTTCCTCAAGAAATCTGTAAGTATTCATACATTCAATTTTGCTTGTTTTTAGATTTGGGGTACCATCAAATTCTCTAAATTTATTGAAATTTGATAGCTTGATTGATCTTCGTACAAAGTATTCTTAGTTGTATTGGATCTGAATAGGATTGCAATCAAGAAATTCTGAAGTTGGGTTTGCTGATTTGGGTCTTTATGTGATTTGACGTTCAATAAATTAGTCTGAAGTGCAAGATTCTTGATTTTCTGATTTGGGGTTTTCTATATCTGTTTCAAGATTCAATTTTTCTGAGGATTCTGTATTGAATTTGATTAATGACATTACAAGAAGGTTAAATAAAGGGGAGGAAGTAGTGTATTTGTAAGCATTTTAGCAATAAAGTTGAAGAAGGAATTGTGAGTAACTGAGGGGGTTAAAGGTTTCTTCACATGGGGAAACCATTGTTTTATGAGATATTGGAGAAGCCAGCAACCAGTTGTGCAATTGGAATATGTAGTGCAATTTGGTTTTATATTCAGAAGTCAAATATTGGTTATTCACATGTTGGTTTGAGTTATGAAACTGCTTTGGAGGGTCATTATTGGAGGATAATAACATCAGCACTTTCACATATTAGTGTGCTTCATCTTGTTTTCAATATGAGTGCACTTTGGAGTCTTGGAGTTGTTGAACAATTGGGGCATTTAGGTCTTGGTGTGCAGTATTATCTTCATTATACACTGGTGTTGGTTGTTCTTTCGGGCATGCTTGTCATCGGAATGTACCATATCTTGATTCAGAAATTTAAGCTAGAGTATTTTCGGAGAGTTACTGCTGTTGGATATTCTTGTGTGGTGTTTGGTTGGATGACGATTCTTTCGGTCAAGCAACCGTCGTCAAAGTTGAATCTTTTTGGTTTTCTTTCACTTCCGATCAGCTTTGCGCCATTTGAGTCGCTCATATTCACTTCCATTATTGTTCCTCAAGCGAGTTTTATTGGACATTTATCGGGAATTATTGTTGGTTATGCTGTTGGTTGGGGTTTGATACATGGGATGAACAATTACTGGGCAGTTACAATGCTGGGATGGACTGTGCTTGTGTTTGTTTTCAGTTTGAAAAAGTCTGGTACATTTGATTTGAACTTTCTTGAGATTGAACCTGTCACGGATCCCTCTCTGCCTTCGGTACGTTTTTTCGCAGCTGGAACTGGTAGAAGTTTACAGATGAGTACGTTACCAGATGCTGGTGCAGATATTGTATAGCTTTTGGAAGATTTCATTGCTTACTTGGGGATCATGACGTAATTCTAGTATTAGCATTTTGCTGGATGACTTGTTGATTATGCATACTTACCTCCAAAACCATCATTTACCTGGTGATACATTCATTGGTTCTCGAAAACCTGTTTGTTAATTGAACCAACTTTTTAGGTAACCACTGTCATTTATAACTGTGGTGCGAAAAGTTGTTATTACATTTTATATGATATAGATGAACCATGATGTATTCCACTTAACACTAAATTTTTGTGATTGCTTTAGCCTTTGTGTCCTATCTATGCATTATAAATGATT</gDNA_template>
            <first_frame> *  S  R  Q  E  T  T  I  V  I  F  A  F  A  C  V  C  H  S  R  G  A  S  T  L  L  H  K  R  N  N  *  N  P  S  F  *  L  H  *  F  S  S  N  I  S  S  R  N  L  *  V  F  I  H  S  I  L  L  V  F  R  F  G  V  P  S  N  S  L  N  L  L  K  F  D  S  L  I  D  L  R  T  K  Y  S  *  L  Y  W  I  *  I  G  L  Q  S  R  N  S  E  V  G  F  A  D  L  G  L  Y  V  I  *  R  S  I  N  *  S  E  V  Q  D  S  *  F  S  D  L  G  F  S  I  S  V  S  R  F  N  F  S  E  D  S  V  L  N  L  I  N  D  I  T  R  R  L  N  K  G  E  E  V  V  Y  L  *  A  F  *  Q  *  S  *  R  R  N  C  E  *  L  R  G  L  K  V  S  S  H  G  E  T  I  V  L  *  D  I  G  E  A  S  N  Q  L  C  N  W  N  M  *  C  N  L  V  L  Y  S  E  V  K  Y  W  L  F  T  C  W  F  E  L  *  N  C  F  G  G  S  L  L  E  D  N  N  I  S  T  F  T  Y  *  C  A  S  S  C  F  Q  Y  E  C  T  L  E  S  W  S  C  *  T  I  G  A  F  R  S  W  C  A  V  L  S  S  L  Y  T  G  V  G  C  S  F  G  H  A  C  H  R  N  V  P  Y  L  D  S  E  I  *  A  R  V  F  S  E  S  Y  C  C  W  I  F  L  C  G  V  W  L  D  D  D  S  F  G  Q  A  T  V  V  K  V  E  S  F  W  F  S  F  T  S  D  Q  L  C  A  I  *  V  A  H  I  H  F  H  Y  C  S  S  S  E  F  Y  W  T  F  I  G  N  Y  C  W  L  C  C  W  L  G  F  D  T  W  D  E  Q  L  L  G  S  Y  N  A  G  M  D  C  A  C  V  C  F  Q  F  E  K  V  W  Y  I  *  F  E  L  S  *  D  *  T  C  H  G  S  L  S  A  F  G  T  F  F  R  S  W  N  W  *  K  F  T  D  E  Y  V  T  R  C  W  C  R  Y  C  I  A  F  G  R  F  H  C  L  L  G  D  H  D  V  I  L  V  L  A  F  C  W  M  T  C  *  L  C  I  L  T  S  K  T  I  I  Y  L  V  I  H  S  L  V  L  E  N  L  F  V  N  *  T  N  F  L  G  N  H  C  H  L  *  L  W  C  E  K  L  L  L  H  F  I  *  Y  R  *  T  M  M  Y  S  T  *  H  *  I  F  V  I  A  L  A  F  V  S  Y  L  C  I  I  N  D  </first_frame>
            <second_frame>  S  P  D  K  R  P  Q  L  *  F  L  H  L  L  A  Y  V  T  P  E  E  P  R  L  F  F  T  S  E  T  T  K  T  P  L  S  N  Y  I  D  F  L  A  T  F  P  Q  E  I  C  K  Y  S  Y  I  Q  F  C  L  F  L  D  L  G  Y  H  Q  I  L  *  I  Y  *  N  L  I  A  *  L  I  F  V  Q  S  I  L  S  C  I  G  S  E  *  D  C  N  Q  E  I  L  K  L  G  L  L  I  W  V  F  M  *  F  D  V  Q  *  I  S  L  K  C  K  I  L  D  F  L  I  W  G  F  L  Y  L  F  Q  D  S  I  F  L  R  I  L  Y  *  I  *  L  M  T  L  Q  E  G  *  I  K  G  R  K  *  C  I  C  K  H  F  S  N  K  V  E  E  G  I  V  S  N  *  G  G  *  R  F  L  H  M  G  K  P  L  F  Y  E  I  L  E  K  P  A  T  S  C  A  I  G  I  C  S  A  I  W  F  Y  I  Q  K  S  N  I  G  Y  S  H  V  G  L  S  Y  E  T  A  L  E  G  H  Y  W  R  I  I  T  S  A  L  S  H  I  S  V  L  H  L  V  F  N  M  S  A  L  W  S  L  G  V  V  E  Q  L  G  H  L  G  L  G  V  Q  Y  Y  L  H  Y  T  L  V  L  V  V  L  S  G  M  L  V  I  G  M  Y  H  I  L  I  Q  K  F  K  L  E  Y  F  R  R  V  T  A  V  G  Y  S  C  V  V  F  G  W  M  T  I  L  S  V  K  Q  P  S  S  K  L  N  L  F  G  F  L  S  L  P  I  S  F  A  P  F  E  S  L  I  F  T  S  I  I  V  P  Q  A  S  F  I  G  H  L  S  G  I  I  V  G  Y  A  V  G  W  G  L  I  H  G  M  N  N  Y  W  A  V  T  M  L  G  W  T  V  L  V  F  V  F  S  L  K  K  S  G  T  F  D  L  N  F  L  E  I  E  P  V  T  D  P  S  L  P  S  V  R  F  F  A  A  G  T  G  R  S  L  Q  M  S  T  L  P  D  A  G  A  D  I  V  *  L  L  E  D  F  I  A  Y  L  G  I  M  T  *  F  *  Y  *  H  F  A  G  *  L  V  D  Y  A  Y  L  P  P  K  P  S  F  T  W  *  Y  I  H  W  F  S  K  T  C  L  L  I  E  P  T  F  *  V  T  T  V  I  Y  N  C  G  A  K  S  C  Y  Y  I  L  Y  D  I  D  E  P  *  C  I  P  L  N  T  K  F  L  *  L  L  *  P  L  C  P  I  Y  A  L  *  M  I </second_frame>
            <third_frame>   V  P  T  R  D  H  N  C  N  F  C  I  C  L  R  M  S  L  Q  R  S  L  D  S  S  S  Q  A  K  Q  L  K  P  L  F  L  I  T  L  I  F  *  Q  H  F  L  K  K  S  V  S  I  H  T  F  N  F  A  C  F  *  I  W  G  T  I  K  F  S  K  F  I  E  I  *  *  L  D  *  S  S  Y  K  V  F  L  V  V  L  D  L  N  R  I  A  I  K  K  F  *  S  W  V  C  *  F  G  S  L  C  D  L  T  F  N  K  L  V  *  S  A  R  F  L  I  F  *  F  G  V  F  Y  I  C  F  K  I  Q  F  F  *  G  F  C  I  E  F  D  *  *  H  Y  K  K  V  K  *  R  G  G  S  S  V  F  V  S  I  L  A  I  K  L  K  K  E  L  *  V  T  E  G  V  K  G  F  F  T  W  G  N  H  C  F  M  R  Y  W  R  S  Q  Q  P  V  V  Q  L  E  Y  V  V  Q  F  G  F  I  F  R  S  Q  I  L  V  I  H  M  L  V  *  V  M  K  L  L  W  R  V  I  I  G  G  *  *  H  Q  H  F  H  I  L  V  C  F  I  L  F  S  I  *  V  H  F  G  V  L  E  L  L  N  N  W  G  I  *  V  L  V  C  S  I  I  F  I  I  H  W  C  W  L  F  F  R  A  C  L  S  S  E  C  T  I  S  *  F  R  N  L  S  *  S  I  F  G  E  L  L  L  L  D  I  L  V  W  C  L  V  G  *  R  F  F  R  S  S  N  R  R  Q  S  *  I  F  L  V  F  F  H  F  R  S  A  L  R  H  L  S  R  S  Y  S  L  P  L  L  F  L  K  R  V  L  L  D  I  Y  R  E  L  L  L  V  M  L  L  V  G  V  *  Y  M  G  *  T  I  T  G  Q  L  Q  C  W  D  G  L  C  L  C  L  F  S  V  *  K  S  L  V  H  L  I  *  T  F  L  R  L  N  L  S  R  I  P  L  C  L  R  Y  V  F  S  Q  L  E  L  V  E  V  Y  R  *  V  R  Y  Q  M  L  V  Q  I  L  Y  S  F  W  K  I  S  L  L  T  W  G  S  *  R  N  S  S  I  S  I  L  L  D  D  L  L  I  M  H  T  Y  L  Q  N  H  H  L  P  G  D  T  F  I  G  S  R  K  P  V  C  *  L  N  Q  L  F  R  *  P  L  S  F  I  T  V  V  R  K  V  V  I  T  F  Y  M  I  *  M  N  H  D  V  F  H  L  T  L  N  F  C  D  C  F  S  L  C  V  L  S  M  H  Y  K  *   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0167M06.1" strand="+"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="53327" stop="54154"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>825</number_coding_nucleotides>
                  <number_encoded_amino_acids>275</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RFLHMGKPLFYEILEKPATSCAIGICSAIWFYIQKSNIGYSHVGLSYETALEGHYWRIITSALSHISVLHLVFNMSALWSLGVVEQLGHLGLGVQYYLHYTLVLVVLSGMLVIGMYHILIQKFKLEYFRRVTAVGYSCVVFGWMTILSVKQPSSKLNLFGFLSLPISFAPFESLIFTSIIVPQASFIGHLSGIIVGYAVGWGLIHGMNNYWAVTMLGWTVLVFVFSLKKSGTFDLNFLEIEPVTDPSLPSVRFFAAGTGRSLQMSTLPDAGADIV*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="-" PGL_start="61590" PGL_stop="56528"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="61590" e_stop="61563"/>
            <exon e_start="59071" e_stop="58109"/>
            <exon e_start="56778" e_stop="56528"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.998" e_score="0.999"/>
          <exon-only e_score="0.964"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="61590" e_stop="61563" e_length="28"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.993">
            <gDNA_intron_boundary i_start="61562" i_stop="59072" i_length="2491"/>
          </intron>
          <exon e_serial="2" e_score="0.999">
            <gDNA_exon_boundary e_start="59071" e_stop="58109" e_length="963"/>
          </exon>
          <intron i_serial="2" don_prob="0.997" acc_prob="0.998">
            <gDNA_intron_boundary i_start="58108" i_stop="56779" i_length="1330"/>
          </intron>
          <exon e_serial="3" e_score="0.964">
            <gDNA_exon_boundary e_start="56778" e_stop="56528" e_length="251"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61590" stop="61563"/>
              <exon start="59071" stop="58109"/>
              <exon start="56778" stop="56528"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U331588" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AACAAGACCTGATCAAACTCTGTTCGAG : ATTGTTTTCATTGCATATGGCCAATCTTGATGGAGATAACGAACCTGAATGGATAAAGAGGGTGAAATCAGAAGGTTCCATTCCCTTTCTGGACCCAGATAATTGCTCAAACGGTTGGGCTTCTCCACCAGGGAATAGTTTCATGGTAAGAGGTCCAGAATACTTTTCAACAAAGGTTAAAGTTCCCGGTGGTGAATTTCTTCTGAAACCTCTTGGTTTTGACTGGATAAAAGGTCCTAAAAAGATTTCTGATATTCTAAATAATCCAAAACACCGTATCAGGATGGCTCTTCAAGATGAAACTCCAACTGGTTGCAAGCCCTTTATTTGGGCTTTCAACTTGCAAGTTCCTAGTAAGGAAAATTTCAGTGCTGTTGTATATTTTGTGGGCCTCGAACCCGTCCCTGAAGGGTCTTTGATGGAGCAGTTCTTGAAAGGAGATGATGCATTTAGAACTAAAAGGTTAAAATTGATTGCGAATATTGTTAAAGGACCTTGGATTGTAAGAAAGGCAGTTGGGGAGCAAGCTATATGCGTAATTGGCCGTGCACTGACTTGCAAGTACTCTATAGCAGACGATTTCATAGAGGTAGATGTTGATATAGGATCTTCGGTGATAGCAAATGCGATTGTTCATCTCGCGTATAATTATATATCAACTCTTACTGTTGATTTAGCCTTCCTTATCGAGAGTCAAACTCAATCAGAACTTCCAGAACGGATTTTAGGAGCGGTAAGATTTTCGGAGCTGCAGACCAGTTCAGCAACACTAGTTGAAATGCCATCCAATGGGAACATGGGAGAGTTCCTTCCTTCTTTCCCTTCAAGGTTATGGAAGTCATTTGGAAACAGTTTCTCCCACCTTGTTCAGGCAGATACTCAAGATGGTAGCTCCAGCTCCAGCCCCTCACTTGTAAAGGAGGTTGTTGATAATGGTCTCTCTGAAGAAGGTACCAAAAAATG : ATCTCCACACTGTAAATATGATGCATTTCTGAAACGTTCAATGGCTCCAGGCTCGGAGAATTCTATTATTGCGGTCTCATATTGTTGGTTGTGATGGCTACATTCACCGCTATTTATAGCTGTAGAAATTACGTACTACAAAAATATGTATACATTTCTGGGGAGCGATTTAGCGACATGGAACTCCAGTAGCATTCTTCACTATTAGCCTCTGCTCATCTTCTCATTTCTTTCTGAAAAAGAAAAAAAAT</gDNA_template>
            <first_frame> N  K  T  *  S  N  S  V  R   : D  C  F  H  C  I  W  P  I  L  M  E  I  T  N  L  N  G  *  R  G  *  N  Q  K  V  P  F  P  F  W  T  Q  I  I  A  Q  T  V  G  L  L  H  Q  G  I  V  S  W  *  E  V  Q  N  T  F  Q  Q  R  L  K  F  P  V  V  N  F  F  *  N  L  L  V  L  T  G  *  K  V  L  K  R  F  L  I  F  *  I  I  Q  N  T  V  S  G  W  L  F  K  M  K  L  Q  L  V  A  S  P  L  F  G  L  S  T  C  K  F  L  V  R  K  I  S  V  L  L  Y  I  L  W  A  S  N  P  S  L  K  G  L  *  W  S  S  S  *  K  E  M  M  H  L  E  L  K  G  *  N  *  L  R  I  L  L  K  D  L  G  L  *  E  R  Q  L  G  S  K  L  Y  A  *  L  A  V  H  *  L  A  S  T  L  *  Q  T  I  S  *  R  *  M  L  I  *  D  L  R  *  *  Q  M  R  L  F  I  S  R  I  I  I  Y  Q  L  L  L  L  I  *  P  S  L  S  R  V  K  L  N  Q  N  F  Q  N  G  F  *  E  R  *  D  F  R  S  C  R  P  V  Q  Q  H  *  L  K  C  H  P  M  G  T  W  E  S  S  F  L  L  S  L  Q  G  Y  G  S  H  L  E  T  V  S  P  T  L  F  R  Q  I  L  K  M  V  A  P  A  P  A  P  H  L  *  R  R  L  L  I  M  V  S  L  K  K  V  P  K  N   : D  L  H  T  V  N  M  M  H  F  *  N  V  Q  W  L  Q  A  R  R  I  L  L  L  R  S  H  I  V  G  C  D  G  Y  I  H  R  Y  L  *  L  *  K  L  R  T  T  K  I  C  I  H  F  W  G  A  I  *  R  H  G  T  P  V  A  F  F  T  I  S  L  C  S  S  S  H  F  F  L  K  K  K  K  N </first_frame>
            <second_frame>  T  R  P  D  Q  T  L  F  E  :  I  V  F  I  A  Y  G  Q  S  *  W  R  *  R  T  *  M  D  K  E  G  E  I  R  R  F  H  S  L  S  G  P  R  *  L  L  K  R  L  G  F  S  T  R  E  *  F  H  G  K  R  S  R  I  L  F  N  K  G  *  S  S  R  W  *  I  S  S  E  T  S  W  F  *  L  D  K  R  S  *  K  D  F  *  Y  S  K  *  S  K  T  P  Y  Q  D  G  S  S  R  *  N  S  N  W  L  Q  A  L  Y  L  G  F  Q  L  A  S  S  *  *  G  K  F  Q  C  C  C  I  F  C  G  P  R  T  R  P  *  R  V  F  D  G  A  V  L  E  R  R  *  C  I  *  N  *  K  V  K  I  D  C  E  Y  C  *  R  T  L  D  C  K  K  G  S  W  G  A  S  Y  M  R  N  W  P  C  T  D  L  Q  V  L  Y  S  R  R  F  H  R  G  R  C  *  Y  R  I  F  G  D  S  K  C  D  C  S  S  R  V  *  L  Y  I  N  S  Y  C  *  F  S  L  P  Y  R  E  S  N  S  I  R  T  S  R  T  D  F  R  S  G  K  I  F  G  A  A  D  Q  F  S  N  T  S  *  N  A  I  Q  W  E  H  G  R  V  P  S  F  F  P  F  K  V  M  E  V  I  W  K  Q  F  L  P  P  C  S  G  R  Y  S  R  W  *  L  Q  L  Q  P  L  T  C  K  G  G  C  *  *  W  S  L  *  R  R  Y  Q  K  M  :  I  S  T  L  *  I  *  C  I  S  E  T  F  N  G  S  R  L  G  E  F  Y  Y  C  G  L  I  L  L  V  V  M  A  T  F  T  A  I  Y  S  C  R  N  Y  V  L  Q  K  Y  V  Y  I  S  G  E  R  F  S  D  M  E  L  Q  *  H  S  S  L  L  A  S  A  H  L  L  I  S  F  *  K  R  K  K   </second_frame>
            <third_frame>   Q  D  L  I  K  L  C  S  R :   L  F  S  L  H  M  A  N  L  D  G  D  N  E  P  E  W  I  K  R  V  K  S  E  G  S  I  P  F  L  D  P  D  N  C  S  N  G  W  A  S  P  P  G  N  S  F  M  V  R  G  P  E  Y  F  S  T  K  V  K  V  P  G  G  E  F  L  L  K  P  L  G  F  D  W  I  K  G  P  K  K  I  S  D  I  L  N  N  P  K  H  R  I  R  M  A  L  Q  D  E  T  P  T  G  C  K  P  F  I  W  A  F  N  L  Q  V  P  S  K  E  N  F  S  A  V  V  Y  F  V  G  L  E  P  V  P  E  G  S  L  M  E  Q  F  L  K  G  D  D  A  F  R  T  K  R  L  K  L  I  A  N  I  V  K  G  P  W  I  V  R  K  A  V  G  E  Q  A  I  C  V  I  G  R  A  L  T  C  K  Y  S  I  A  D  D  F  I  E  V  D  V  D  I  G  S  S  V  I  A  N  A  I  V  H  L  A  Y  N  Y  I  S  T  L  T  V  D  L  A  F  L  I  E  S  Q  T  Q  S  E  L  P  E  R  I  L  G  A  V  R  F  S  E  L  Q  T  S  S  A  T  L  V  E  M  P  S  N  G  N  M  G  E  F  L  P  S  F  P  S  R  L  W  K  S  F  G  N  S  F  S  H  L  V  Q  A  D  T  Q  D  G  S  S  S  S  S  P  S  L  V  K  E  V  V  D  N  G  L  S  E  E  G  T  K  K  * :   S  P  H  C  K  Y  D  A  F  L  K  R  S  M  A  P  G  S  E  N  S  I  I  A  V  S  Y  C  W  L  *  W  L  H  S  P  L  F  I  A  V  E  I  T  Y  Y  K  N  M  Y  T  F  L  G  S  D  L  A  T  W  N  S  S  S  I  L  H  Y  *  P  L  L  I  F  S  F  L  S  E  K  E  K  K  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0167M06.1" strand="-"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="61588" stop="61563"/>
                    <exon start="59071" stop="56778"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>987</number_coding_nucleotides>
                  <number_encoded_amino_acids>329</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QDLIKLCSRLFSLHMANLDGDNEPEWIKRVKSEGSIPFLDPDNCSNGWASPPGNSFMVRGPEYFSTKVKVPGGEFLLKPLGFDWIKGPKKISDILNNPKHRIRMALQDETPTGCKPFIWAFNLQVPSKENFSAVVYFVGLEPVPEGSLMEQFLKGDDAFRTKRLKLIANIVKGPWIVRKAVGEQAICVIGRALTCKYSIADDFIEVDVDIGSSVIANAIVHLAYNYISTLTVDLAFLIESQTQSELPERILGAVRFSELQTSSATLVEMPSNGNMGEFLPSFPSRLWKSFGNSFSHLVQADTQDGSSSSSPSLVKEVVDNGLSEEGTKK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="-" PGL_start="72139" PGL_stop="64166"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="72139" e_stop="71949"/>
            <exon e_start="71733" e_stop="71728"/>
            <exon e_start="71674" e_stop="71600"/>
            <exon e_start="71530" e_stop="70623"/>
            <exon e_start="66698" e_stop="66566"/>
            <exon e_start="66312" e_stop="66228"/>
            <exon e_start="65173" e_stop="64247"/>
            <exon e_start="64176" e_stop="64166"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.000" e_score="0.982"/>
          <exon-intron don_prob="0.900" acc_prob="0.999" e_score="0.500"/>
          <exon-intron don_prob="0.000" acc_prob="0.391" e_score="0.987"/>
          <exon-intron don_prob="1.000" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.990" e_score="1.000"/>
          <exon-intron don_prob="0.867" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.962" e_score="0.954"/>
          <exon-only e_score="0.636"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.982">
            <gDNA_exon_boundary e_start="72139" e_stop="71949" e_length="191"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.000">
            <gDNA_intron_boundary i_start="71948" i_stop="71734" i_length="215"/>
          </intron>
          <exon e_serial="2" e_score="0.500">
            <gDNA_exon_boundary e_start="71733" e_stop="71728" e_length="6"/>
          </exon>
          <intron i_serial="2" don_prob="0.900" acc_prob="0.999">
            <gDNA_intron_boundary i_start="71727" i_stop="71675" i_length="53"/>
          </intron>
          <exon e_serial="3" e_score="0.987">
            <gDNA_exon_boundary e_start="71674" e_stop="71600" e_length="75"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.391">
            <gDNA_intron_boundary i_start="71599" i_stop="71531" i_length="69"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="71530" e_stop="70623" e_length="908"/>
          </exon>
          <intron i_serial="4" don_prob="1.000" acc_prob="0.996">
            <gDNA_intron_boundary i_start="70622" i_stop="66699" i_length="3924"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="66698" e_stop="66566" e_length="133"/>
          </exon>
          <intron i_serial="5" don_prob="0.998" acc_prob="0.990">
            <gDNA_intron_boundary i_start="66565" i_stop="66313" i_length="253"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="66312" e_stop="66228" e_length="85"/>
          </exon>
          <intron i_serial="6" don_prob="0.867" acc_prob="0.998">
            <gDNA_intron_boundary i_start="66227" i_stop="65174" i_length="1054"/>
          </intron>
          <exon e_serial="7" e_score="0.954">
            <gDNA_exon_boundary e_start="65173" e_stop="64247" e_length="927"/>
          </exon>
          <intron i_serial="7" don_prob="0.000" acc_prob="0.962">
            <gDNA_intron_boundary i_start="64246" i_stop="64177" i_length="70"/>
          </intron>
          <exon e_serial="8" e_score="0.636">
            <gDNA_exon_boundary e_start="64176" e_stop="64166" e_length="11"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="72139" stop="71949"/>
              <exon start="71733" stop="71728"/>
              <exon start="71674" stop="71600"/>
              <exon start="71530" stop="70623"/>
              <exon start="66698" stop="66566"/>
              <exon start="66312" stop="66228"/>
              <exon start="65173" stop="64247"/>
              <exon start="64176" stop="64166"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U320645" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAGCTTTTCCCTTTTCTCTCTCGCATGTGATAAAGCTGCTTCCTTCTGCTTCTGCTTCCCTTTTCACATTTTTCCCTTCTCTGCAGATCTAATTTCAAAGCTAATCGAAACCGT : ATCTTT : AGGGAATTGATCTGGGATAAGCTTGTTTGGTGTTTGCGGAATCTACAGGGTCTCAGCAAGGGGTTTCATGTTCTG : AGGAAAAGCAACTTGGATTGTGATTTTATGGTTTTCCTGCTATAATGTTCTTGCTTTGACCGGGGAAAAGTATCATTACTTGTTGATTTTTGGTTTTCTGTTGGTACGGTTCTTGTTGGAGTATATATATATGTGTGGGATGTTGGGTTTGTTCCTGTGCTGTTAACATTTGGAATTTGAAGGGTTGGGGTTTTTTCTGTTTGGATTTGGAGGGTTTGTATGGATAAGGATAAGTCTTCTTCAAGCCATATAGGAGGTTCGTTGCCTCCATCAGGGAGATACTCATTATTTTCACCTCCCGGTAGTAGCTCCAATGTAAAGTCAGAACAACCTGGATTAGCAAATTTACCTCCCTTAGGACCTGGAAATGCTTCAGAATCAGGTCATTTTGGTCATGGTTTGTCGGCAGATTCAAGCCTGTTTAGTCTTGATATAAGCCGAATGTCTGATAACCCACCAAGAAAATTTGGTCATAGGCGTGCCCACTCAGAAATTCTTACTCTTCCTGATGATATTAGCTTTGATAGTGATCTTGGCGTTGTTGGACTAGATGGACCGTCTCTGTCAGATGAGACTGAGGAGGACATCTTGTCAATGTACCTTGACATGGATAAGTTCAATTCTTCAACTCTGTCTTCTGAATTCCAAGTGGGTGAGTCTTCTTCAGCTGCTCCAGGTTCATCACAAACAACAGCAATGGCTTCAGGAACAAATAAATTTGCTCCTACTGTTAGTGAGAAGCCAAGAGTTAGACATCAGCATAGCCAGTCCATGGATGGTTCAACTACAATCAAGCCAGAGATGCTCATGTCAGGAGTGGAAGAGCCTTCTTCAGCTGAAACTAAGAAAGCCACGTCAGCTGCAAAGCTTGCTGAACTTGCTCTTATTGATCCTAAACGTGCCAAGCG : GATTTGGGCCAACAGGCAGTCAGCTGCAAGATCAAAGGAAAGGAAAATGAGATATATAGCAGAGCTTGAGAGAAAAGTTCAGACTCTGCAAACGGAAGCAACTACTTTATCTACTCAGTTGACCCTATTGCAG : AGAGATACAAACGGCCTGAATGCTGAAAACAGTGAACTTAAACTGCGTTTACAAACAATGGAACAACAGGTTCACTTGCAAGATG : CGTTGAATGATGCTTTAAAGGAGGAGATACAGCATCTGAAAGTGCTAACTGGGCAAGGCATAGCAAATGGTGGACCTATGATGAACTTCCCAGCAACCTTTGGAGGCAATCAGCAGTTCTACTCTAACAACCAGGCAATGCATACATTGTTGGCTGCACAACAACTTCAACAGCTCCAGCTACATTCTCATAAGCAACAACACCAGTTTCAGCAACATCAGCTACACCAGTTTCAGCAGCAACAGTTGCAGCACCAACAACAGCAACAGCAACCTCTTATGCAGCAGCAGCAGCAGCAGGATCAACTTTCACAAGCCGGAGATGTGATGTCAAGAGGTTCTCTGTCATCTCCTCAAAATGAAAACGCTTCTGATGTTAGTTCTGTAGCAAAGGATTGAACAGCTGATGGCCAGAGAGACAGGAGATGGTGTATGTTTTAAAAATCATCATGTGTTTTCCCATCTAGCAGCTCATTTTTGTGTTTCAAAATCATCACGTGTTGAAACAACATCTAGCTCAGGTTCTCTTGCTTTCAGTTAGCTCCTTCATCTGCATTTTAGTACTTTTGTAGGGTCATTTGACTTTTAGTTGAAATTGTTCAAATCCCATTCTATGCATATGTCATTTTGTCAACTATCAACATGATTTTCTTCATGTTACCAATATTGTTGGTGGTAGTTTTTTTGGACATCAATCACTTATATCTCTCTCACACTGTTCAGTGTTCACATTTTTCGAATAATGTTTTGTGGCTTGCGCGATCGTGGAGGGTAAAATTCTCATGGTGCTCCTCAATAGGTAGGATTTACCAGAGGCGGATCCAGAGCGTAAACTATGGGGTTCAAGGAACTCCATAACTTTTATCTAGGCCTTTAAATGTATTCGTTAAATATTTGATCGTGAACTTGGTTAAATATTGTAATCCCC : AGAAAAAGTTA</gDNA_template>
            <first_frame> F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  L  S  F  S  L  F  S  L  A  C  D  K  A  A  S  F  C  F  C  F  P  F  H  I  F  P  F  S  A  D  L  I  S  K  L  I  E  T  V :   S  L :   G  N  *  S  G  I  S  L  F  G  V  C  G  I  Y  R  V  S  A  R  G  F  M  F  * :   G  K  A  T  W  I  V  I  L  W  F  S  C  Y  N  V  L  A  L  T  G  E  K  Y  H  Y  L  L  I  F  G  F  L  L  V  R  F  L  L  E  Y  I  Y  M  C  G  M  L  G  L  F  L  C  C  *  H  L  E  F  E  G  L  G  F  F  L  F  G  F  G  G  F  V  W  I  R  I  S  L  L  Q  A  I  *  E  V  R  C  L  H  Q  G  D  T  H  Y  F  H  L  P  V  V  A  P  M  *  S  Q  N  N  L  D  *  Q  I  Y  L  P  *  D  L  E  M  L  Q  N  Q  V  I  L  V  M  V  C  R  Q  I  Q  A  C  L  V  L  I  *  A  E  C  L  I  T  H  Q  E  N  L  V  I  G  V  P  T  Q  K  F  L  L  F  L  M  I  L  A  L  I  V  I  L  A  L  L  D  *  M  D  R  L  C  Q  M  R  L  R  R  T  S  C  Q  C  T  L  T  W  I  S  S  I  L  Q  L  C  L  L  N  S  K  W  V  S  L  L  Q  L  L  Q  V  H  H  K  Q  Q  Q  W  L  Q  E  Q  I  N  L  L  L  L  L  V  R  S  Q  E  L  D  I  S  I  A  S  P  W  M  V  Q  L  Q  S  S  Q  R  C  S  C  Q  E  W  K  S  L  L  Q  L  K  L  R  K  P  R  Q  L  Q  S  L  L  N  L  L  L  L  I  L  N  V  P  S   : G  F  G  P  T  G  S  Q  L  Q  D  Q  R  K  G  K  *  D  I  *  Q  S  L  R  E  K  F  R  L  C  K  R  K  Q  L  L  Y  L  L  S  *  P  Y  C  R :   E  I  Q  T  A  *  M  L  K  T  V  N  L  N  C  V  Y  K  Q  W  N  N  R  F  T  C  K  M  :  R  *  M  M  L  *  R  R  R  Y  S  I  *  K  C  *  L  G  K  A  *  Q  M  V  D  L  *  *  T  S  Q  Q  P  L  E  A  I  S  S  S  T  L  T  T  R  Q  C  I  H  C  W  L  H  N  N  F  N  S  S  S  Y  I  L  I  S  N  N  T  S  F  S  N  I  S  Y  T  S  F  S  S  N  S  C  S  T  N  N  S  N  S  N  L  L  C  S  S  S  S  S  R  I  N  F  H  K  P  E  M  *  C  Q  E  V  L  C  H  L  L  K  M  K  T  L  L  M  L  V  L  *  Q  R  I  E  Q  L  M  A  R  E  T  G  D  G  V  C  F  K  N  H  H  V  F  S  H  L  A  A  H  F  C  V  S  K  S  S  R  V  E  T  T  S  S  S  G  S  L  A  F  S  *  L  L  H  L  H  F  S  T  F  V  G  S  F  D  F  *  L  K  L  F  K  S  H  S  M  H  M  S  F  C  Q  L  S  T  *  F  S  S  C  Y  Q  Y  C  W  W  *  F  F  W  T  S  I  T  Y  I  S  L  T  L  F  S  V  H  I  F  R  I  M  F  C  G  L  R  D  R  G  G  *  N  S  H  G  A  P  Q  *  V  G  F  T  R  G  G  S  R  A  *  T  M  G  F  K  E  L  H  N  F  Y  L  G  L  *  M  Y  S  L  N  I  *  S  *  T  W  L  N  I  V  I  P  :  R  K  S   </first_frame>
            <second_frame>  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  *  A  F  P  F  S  L  S  H  V  I  K  L  L  P  S  A  S  A  S  L  F  T  F  F  P  S  L  Q  I  *  F  Q  S  *  S  K  P   : Y  L   : *  G  I  D  L  G  *  A  C  L  V  F  A  E  S  T  G  S  Q  Q  G  V  S  C  S   : E  E  K  Q  L  G  L  *  F  Y  G  F  P  A  I  M  F  L  L  *  P  G  K  S  I  I  T  C  *  F  L  V  F  C  W  Y  G  S  C  W  S  I  Y  I  C  V  G  C  W  V  C  S  C  A  V  N  I  W  N  L  K  G  W  G  F  F  C  L  D  L  E  G  L  Y  G  *  G  *  V  F  F  K  P  Y  R  R  F  V  A  S  I  R  E  I  L  I  I  F  T  S  R  *  *  L  Q  C  K  V  R  T  T  W  I  S  K  F  T  S  L  R  T  W  K  C  F  R  I  R  S  F  W  S  W  F  V  G  R  F  K  P  V  *  S  *  Y  K  P  N  V  *  *  P  T  K  K  I  W  S  *  A  C  P  L  R  N  S  Y  S  S  *  *  Y  *  L  *  *  *  S  W  R  C  W  T  R  W  T  V  S  V  R  *  D  *  G  G  H  L  V  N  V  P  *  H  G  *  V  Q  F  F  N  S  V  F  *  I  P  S  G  *  V  F  F  S  C  S  R  F  I  T  N  N  S  N  G  F  R  N  K  *  I  C  S  Y  C  *  *  E  A  K  S  *  T  S  A  *  P  V  H  G  W  F  N  Y  N  Q  A  R  D  A  H  V  R  S  G  R  A  F  F  S  *  N  *  E  S  H  V  S  C  K  A  C  *  T  C  S  Y  *  S  *  T  C  Q  A  :  D  L  G  Q  Q  A  V  S  C  K  I  K  G  K  E  N  E  I  Y  S  R  A  *  E  K  S  S  D  S  A  N  G  S  N  Y  F  I  Y  S  V  D  P  I  A   : E  R  Y  K  R  P  E  C  *  K  Q  *  T  *  T  A  F  T  N  N  G  T  T  G  S  L  A  R  C :   V  E  *  C  F  K  G  G  D  T  A  S  E  S  A  N  W  A  R  H  S  K  W  W  T  Y  D  E  L  P  S  N  L  W  R  Q  S  A  V  L  L  *  Q  P  G  N  A  Y  I  V  G  C  T  T  T  S  T  A  P  A  T  F  S  *  A  T  T  P  V  S  A  T  S  A  T  P  V  S  A  A  T  V  A  A  P  T  T  A  T  A  T  S  Y  A  A  A  A  A  A  G  S  T  F  T  S  R  R  C  D  V  K  R  F  S  V  I  S  S  K  *  K  R  F  *  C  *  F  C  S  K  G  L  N  S  *  W  P  E  R  Q  E  M  V  Y  V  L  K  I  I  M  C  F  P  I  *  Q  L  I  F  V  F  Q  N  H  H  V  L  K  Q  H  L  A  Q  V  L  L  L  S  V  S  S  F  I  C  I  L  V  L  L  *  G  H  L  T  F  S  *  N  C  S  N  P  I  L  C  I  C  H  F  V  N  Y  Q  H  D  F  L  H  V  T  N  I  V  G  G  S  F  F  G  H  Q  S  L  I  S  L  S  H  C  S  V  F  T  F  F  E  *  C  F  V  A  C  A  I  V  E  G  K  I  L  M  V  L  L  N  R  *  D  L  P  E  A  D  P  E  R  K  L  W  G  S  R  N  S  I  T  F  I  *  A  F  K  C  I  R  *  I  F  D  R  E  L  G  *  I  L  *  S  P :   E  K  V  </second_frame>
            <third_frame>   F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  K  L  F  P  F  L  S  R  M  *  *  S  C  F  L  L  L  L  L  P  F  S  H  F  S  L  L  C  R  S  N  F  K  A  N  R  N  R  :  I  F  :  R  E  L  I  W  D  K  L  V  W  C  L  R  N  L  Q  G  L  S  K  G  F  H  V  L  :  R  K  S  N  L  D  C  D  F  M  V  F  L  L  *  C  S  C  F  D  R  G  K  V  S  L  L  V  D  F  W  F  S  V  G  T  V  L  V  G  V  Y  I  Y  V  W  D  V  G  F  V  P  V  L  L  T  F  G  I  *  R  V  G  V  F  S  V  W  I  W  R  V  C  M  D  K  D  K  S  S  S  S  H  I  G  G  S  L  P  P  S  G  R  Y  S  L  F  S  P  P  G  S  S  S  N  V  K  S  E  Q  P  G  L  A  N  L  P  P  L  G  P  G  N  A  S  E  S  G  H  F  G  H  G  L  S  A  D  S  S  L  F  S  L  D  I  S  R  M  S  D  N  P  P  R  K  F  G  H  R  R  A  H  S  E  I  L  T  L  P  D  D  I  S  F  D  S  D  L  G  V  V  G  L  D  G  P  S  L  S  D  E  T  E  E  D  I  L  S  M  Y  L  D  M  D  K  F  N  S  S  T  L  S  S  E  F  Q  V  G  E  S  S  S  A  A  P  G  S  S  Q  T  T  A  M  A  S  G  T  N  K  F  A  P  T  V  S  E  K  P  R  V  R  H  Q  H  S  Q  S  M  D  G  S  T  T  I  K  P  E  M  L  M  S  G  V  E  E  P  S  S  A  E  T  K  K  A  T  S  A  A  K  L  A  E  L  A  L  I  D  P  K  R  A  K  R :   I  W  A  N  R  Q  S  A  A  R  S  K  E  R  K  M  R  Y  I  A  E  L  E  R  K  V  Q  T  L  Q  T  E  A  T  T  L  S  T  Q  L  T  L  L  Q  :  R  D  T  N  G  L  N  A  E  N  S  E  L  K  L  R  L  Q  T  M  E  Q  Q  V  H  L  Q  D   : A  L  N  D  A  L  K  E  E  I  Q  H  L  K  V  L  T  G  Q  G  I  A  N  G  G  P  M  M  N  F  P  A  T  F  G  G  N  Q  Q  F  Y  S  N  N  Q  A  M  H  T  L  L  A  A  Q  Q  L  Q  Q  L  Q  L  H  S  H  K  Q  Q  H  Q  F  Q  Q  H  Q  L  H  Q  F  Q  Q  Q  Q  L  Q  H  Q  Q  Q  Q  Q  Q  P  L  M  Q  Q  Q  Q  Q  Q  D  Q  L  S  Q  A  G  D  V  M  S  R  G  S  L  S  S  P  Q  N  E  N  A  S  D  V  S  S  V  A  K  D  *  T  A  D  G  Q  R  D  R  R  W  C  M  F  *  K  S  S  C  V  F  P  S  S  S  S  F  L  C  F  K  I  I  T  C  *  N  N  I  *  L  R  F  S  C  F  Q  L  A  P  S  S  A  F  *  Y  F  C  R  V  I  *  L  L  V  E  I  V  Q  I  P  F  Y  A  Y  V  I  L  S  T  I  N  M  I  F  F  M  L  P  I  L  L  V  V  V  F  L  D  I  N  H  L  Y  L  S  H  T  V  Q  C  S  H  F  S  N  N  V  L  W  L  A  R  S  W  R  V  K  F  S  W  C  S  S  I  G  R  I  Y  Q  R  R  I  Q  S  V  N  Y  G  V  Q  G  T  P  *  L  L  S  R  P  L  N  V  F  V  K  Y  L  I  V  N  L  V  K  Y  C  N  P   : Q  K  K  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0167M06.1" strand="-"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="71350" stop="70623"/>
                    <exon start="66698" stop="66566"/>
                    <exon start="66312" stop="66228"/>
                    <exon start="65173" stop="64776"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1341</number_coding_nucleotides>
                  <number_encoded_amino_acids>447</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RVGVFSVWIWRVCMDKDKSSSSHIGGSLPPSGRYSLFSPPGSSSNVKSEQPGLANLPPLGPGNASESGHFGHGLSADSSLFSLDISRMSDNPPRKFGHRRAHSEILTLPDDISFDSDLGVVGLDGPSLSDETEEDILSMYLDMDKFNSSTLSSEFQVGESSSAAPGSSQTTAMASGTNKFAPTVSEKPRVRHQHSQSMDGSTTIKPEMLMSGVEEPSSAETKKATSAAKLAELALIDPKRAKRIWANRQSAARSKERKMRYIAELERKVQTLQTEATTLSTQLTLLQRDTNGLNAENSELKLRLQTMEQQVHLQDALNDALKEEIQHLKVLTGQGIANGGPMMNFPATFGGNQQFYSNNQAMHTLLAAQQLQQLQLHSHKQQHQFQQHQLHQFQQQQLQHQQQQQQPLMQQQQQQDQLSQAGDVMSRGSLSSPQNENASDVSSVAKD*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0167M06.1" strand="-"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="64592" stop="64317"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>273</number_coding_nucleotides>
                  <number_encoded_amino_acids>91</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LLVEIVQIPFYAYVILSTINMIFFMLPILLVVVFLDINHLYLSHTVQCSHFSNNVLWLARSWRVKFSWCSSIGRIYQRRIQSVNYGVQGTP*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0167M06.1" strand="-"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="72139" stop="71949"/>
                    <exon start="71733" stop="71728"/>
                    <exon start="71674" stop="71665"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>204</number_coding_nucleotides>
                  <number_encoded_amino_acids>68</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FFFFFFFFFFFFFFFFFFFFFFFFFLSFSLFSLACDKAASFCFCFPFHIFPFSADLISKLIETVSLGN*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="70675" e_stop="70623"/>
            <exon e_start="66698" e_stop="66678"/>
            <exon e_start="64883" e_stop="64460"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.996" e_score="0.943"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="1.000"/>
          <exon-only e_score="0.995"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.943">
            <gDNA_exon_boundary e_start="70675" e_stop="70623" e_length="53"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.996">
            <gDNA_intron_boundary i_start="70622" i_stop="66699" i_length="3924"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="66698" e_stop="66678" e_length="21"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="66677" i_stop="64884" i_length="1794"/>
          </intron>
          <exon e_serial="3" e_score="0.995">
            <gDNA_exon_boundary e_start="64883" e_stop="64460" e_length="424"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70675" stop="70623"/>
              <exon start="66698" stop="66678"/>
              <exon start="64883" stop="64460"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U337173" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TCAGCTGCAAAGCTTGCTGAACTTGCTCTTATTGATCCTAAACGTGCCAAGCG : GATTTGGGCCAACAGGCAGTC : CAGCAGCAGGATCAACTTTCACAAGCCGGAGATGTGATGTCAAGAGGTTCTCTGTCATCTCCTCAAAATGAAAACGCTTCTGATGTTAGTTCTGTAGCAAAGGATTGAACAGCTGATGGCCAGAGAGACAGGAGATGGTGTATGTTTTAAAAATCATCATGTGTTTTCCCATCTAGCAGCTCATTTTTGTGTTTCAAAATCATCACGTGTTGAAACAACATCTAGCTCAGGTTCTCTTGCTTTCAGTTAGCTCCTTCATCTGCATTTTAGTACTTTTGTAGGGTCATTTGACTTTTAGTTGAAATTGTTCAAATCCCATTCTATGCATATGTCATTTTGTCAACTATCAACATGATTTTCTTCATGTTACCAATATTGTTGGTGGTAGTTTTTTTGGACATCAATCACTTATATCTCTCTCACA</gDNA_template>
            <first_frame> S  A  A  K  L  A  E  L  A  L  I  D  P  K  R  A  K  R :   I  W  A  N  R  Q  S :   S  S  R  I  N  F  H  K  P  E  M  *  C  Q  E  V  L  C  H  L  L  K  M  K  T  L  L  M  L  V  L  *  Q  R  I  E  Q  L  M  A  R  E  T  G  D  G  V  C  F  K  N  H  H  V  F  S  H  L  A  A  H  F  C  V  S  K  S  S  R  V  E  T  T  S  S  S  G  S  L  A  F  S  *  L  L  H  L  H  F  S  T  F  V  G  S  F  D  F  *  L  K  L  F  K  S  H  S  M  H  M  S  F  C  Q  L  S  T  *  F  S  S  C  Y  Q  Y  C  W  W  *  F  F  W  T  S  I  T  Y  I  S  L  T </first_frame>
            <second_frame>  Q  L  Q  S  L  L  N  L  L  L  L  I  L  N  V  P  S   : G  F  G  P  T  G  S   : P  A  A  G  S  T  F  T  S  R  R  C  D  V  K  R  F  S  V  I  S  S  K  *  K  R  F  *  C  *  F  C  S  K  G  L  N  S  *  W  P  E  R  Q  E  M  V  Y  V  L  K  I  I  M  C  F  P  I  *  Q  L  I  F  V  F  Q  N  H  H  V  L  K  Q  H  L  A  Q  V  L  L  L  S  V  S  S  F  I  C  I  L  V  L  L  *  G  H  L  T  F  S  *  N  C  S  N  P  I  L  C  I  C  H  F  V  N  Y  Q  H  D  F  L  H  V  T  N  I  V  G  G  S  F  F  G  H  Q  S  L  I  S  L  S   </second_frame>
            <third_frame>   S  C  K  A  C  *  T  C  S  Y  *  S  *  T  C  Q  A  :  D  L  G  Q  Q  A  V  :  Q  Q  Q  D  Q  L  S  Q  A  G  D  V  M  S  R  G  S  L  S  S  P  Q  N  E  N  A  S  D  V  S  S  V  A  K  D  *  T  A  D  G  Q  R  D  R  R  W  C  M  F  *  K  S  S  C  V  F  P  S  S  S  S  F  L  C  F  K  I  I  T  C  *  N  N  I  *  L  R  F  S  C  F  Q  L  A  P  S  S  A  F  *  Y  F  C  R  V  I  *  L  L  V  E  I  V  Q  I  P  F  Y  A  Y  V  I  L  S  T  I  N  M  I  F  F  M  L  P  I  L  L  V  V  V  F  L  D  I  N  H  L  Y  L  S  H  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C06HBa0167M06.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="+" PGL_start="73981" PGL_stop="83078"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="73981" e_stop="74059"/>
            <exon e_start="74825" e_stop="74918"/>
            <exon e_start="75011" e_stop="75120"/>
            <exon e_start="82489" e_stop="83078"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.726" acc_prob="0.991" e_score="1.000"/>
          <exon-intron don_prob="0.958" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.983" acc_prob="0.993" e_score="1.000"/>
          <exon-only e_score="0.995"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="73981" e_stop="74059" e_length="79"/>
          </exon>
          <intron i_serial="1" don_prob="0.726" acc_prob="0.991">
            <gDNA_intron_boundary i_start="74060" i_stop="74824" i_length="765"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="74825" e_stop="74918" e_length="94"/>
          </exon>
          <intron i_serial="2" don_prob="0.958" acc_prob="0.997">
            <gDNA_intron_boundary i_start="74919" i_stop="75010" i_length="92"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="75011" e_stop="75120" e_length="110"/>
          </exon>
          <intron i_serial="3" don_prob="0.983" acc_prob="0.993">
            <gDNA_intron_boundary i_start="75121" i_stop="82488" i_length="7368"/>
          </intron>
          <exon e_serial="4" e_score="0.995">
            <gDNA_exon_boundary e_start="82489" e_stop="83078" e_length="590"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="73981" stop="74059"/>
              <exon start="74825" stop="74918"/>
              <exon start="75011" stop="75120"/>
              <exon start="82489" stop="83078"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U318312" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTTCTTTGACCCATCGCTTCTCTTCATCGCTGTGTTGAAGTTTTGGTTTTTGAGTTTTGAGATTTGCTGTTCGAAGATG : GTGCGATTACAGCCAGACCCATTCCTCAATGAACTGACGAGTATGTTTGAGCGAACTACTGAGCATGGTTCCGTTTGGGTTACGCTTAAACACT : CTTCTGATAAATCTAAAGCCCAACGGAATAAGATGAAGACAGCTGGTGAAACTCTTGAATTTAAGTGCCTCATCCGAGCAACTGATGGGAAAAAGAATATTTCCACAATG : GTTGGAGCAAAAGATCACCAGCGTTTCCAAGCATCTTATGCAATTTTGCTGAAGGCCCGGTTGACTGCACTAAAGAAGAGGGAGAGGAAGGACAAGAGGAAGGCTACTGATTCTGACAAAAAGATGGATATTTCGAAAAAGAAATCTGCTGCTGCTAAAGCCTCTACATGAAACTTTAGTCCTTTGGTTTATTCCCCCATTTTGTTTCTAGGATAGAGTTGTAGGATTTGAACCCCATCCATTTGGGGCGACAAGTCTGAAACTTCATTACAACTCCACTGCATAGAATGAAGAAAGGAGGTGTTTTTACTCAATTTGATTATTCACATCTAAATTAGTCAAACTTTTTAAAGAGCTTGTTGGGTTATGGAACAGTTGAAGGAATTTTGTCATAATCTTGATCTTTTAATTCCTTGAACAACAGCTTTGGCAATTGAAAGTAGATGGGACCAAATTAAAAGTAGTATGCCTACATACTTGAATGTCATGTCAACTGCATATGTCCATACTTTTTGGTTGTGGGAACTTAAAATGACATTTTTTTGCTTCTTTTTGTTCAACCAGTTCTTTTTCCACTGTTCCAAAACCAT</gDNA_template>
            <first_frame> F  L  *  P  I  A  S  L  H  R  C  V  E  V  L  V  F  E  F  *  D  L  L  F  E  D   : G  A  I  T  A  R  P  I  P  Q  *  T  D  E  Y  V  *  A  N  Y  *  A  W  F  R  L  G  Y  A  *  T  L :   F  *  *  I  *  S  P  T  E  *  D  E  D  S  W  *  N  S  *  I  *  V  P  H  P  S  N  *  W  E  K  E  Y  F  H  N   : G  W  S  K  R  S  P  A  F  P  S  I  L  C  N  F  A  E  G  P  V  D  C  T  K  E  E  G  E  E  G  Q  E  E  G  Y  *  F  *  Q  K  D  G  Y  F  E  K  E  I  C  C  C  *  S  L  Y  M  K  L  *  S  F  G  L  F  P  H  F  V  S  R  I  E  L  *  D  L  N  P  I  H  L  G  R  Q  V  *  N  F  I  T  T  P  L  H  R  M  K  K  G  G  V  F  T  Q  F  D  Y  S  H  L  N  *  S  N  F  L  K  S  L  L  G  Y  G  T  V  E  G  I  L  S  *  S  *  S  F  N  S  L  N  N  S  F  G  N  *  K  *  M  G  P  N  *  K  *  Y  A  Y  I  L  E  C  H  V  N  C  I  C  P  Y  F  L  V  V  G  T  *  N  D  I  F  L  L  L  F  V  Q  P  V  L  F  P  L  F  Q  N  H </first_frame>
            <second_frame>  F  F  D  P  S  L  L  F  I  A  V  L  K  F  W  F  L  S  F  E  I  C  C  S  K  M  :  V  R  L  Q  P  D  P  F  L  N  E  L  T  S  M  F  E  R  T  T  E  H  G  S  V  W  V  T  L  K  H   : S  S  D  K  S  K  A  Q  R  N  K  M  K  T  A  G  E  T  L  E  F  K  C  L  I  R  A  T  D  G  K  K  N  I  S  T  M  :  V  G  A  K  D  H  Q  R  F  Q  A  S  Y  A  I  L  L  K  A  R  L  T  A  L  K  K  R  E  R  K  D  K  R  K  A  T  D  S  D  K  K  M  D  I  S  K  K  K  S  A  A  A  K  A  S  T  *  N  F  S  P  L  V  Y  S  P  I  L  F  L  G  *  S  C  R  I  *  T  P  S  I  W  G  D  K  S  E  T  S  L  Q  L  H  C  I  E  *  R  K  E  V  F  L  L  N  L  I  I  H  I  *  I  S  Q  T  F  *  R  A  C  W  V  M  E  Q  L  K  E  F  C  H  N  L  D  L  L  I  P  *  T  T  A  L  A  I  E  S  R  W  D  Q  I  K  S  S  M  P  T  Y  L  N  V  M  S  T  A  Y  V  H  T  F  W  L  W  E  L  K  M  T  F  F  C  F  F  L  F  N  Q  F  F  F  H  C  S  K  T   </second_frame>
            <third_frame>   S  L  T  H  R  F  S  S  S  L  C  *  S  F  G  F  *  V  L  R  F  A  V  R  R  W :   C  D  Y  S  Q  T  H  S  S  M  N  *  R  V  C  L  S  E  L  L  S  M  V  P  F  G  L  R  L  N  T  :  L  L  I  N  L  K  P  N  G  I  R  *  R  Q  L  V  K  L  L  N  L  S  A  S  S  E  Q  L  M  G  K  R  I  F  P  Q  W :   L  E  Q  K  I  T  S  V  S  K  H  L  M  Q  F  C  *  R  P  G  *  L  H  *  R  R  G  R  G  R  T  R  G  R  L  L  I  L  T  K  R  W  I  F  R  K  R  N  L  L  L  L  K  P  L  H  E  T  L  V  L  W  F  I  P  P  F  C  F  *  D  R  V  V  G  F  E  P  H  P  F  G  A  T  S  L  K  L  H  Y  N  S  T  A  *  N  E  E  R  R  C  F  Y  S  I  *  L  F  T  S  K  L  V  K  L  F  K  E  L  V  G  L  W  N  S  *  R  N  F  V  I  I  L  I  F  *  F  L  E  Q  Q  L  W  Q  L  K  V  D  G  T  K  L  K  V  V  C  L  H  T  *  M  S  C  Q  L  H  M  S  I  L  F  G  C  G  N  L  K  *  H  F  F  A  S  F  C  S  T  S  S  F  S  T  V  P  K  P  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0167M06.1" strand="+"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="73982" stop="74059"/>
                    <exon start="74825" stop="74918"/>
                    <exon start="75011" stop="75120"/>
                    <exon start="82489" stop="82659"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>450</number_coding_nucleotides>
                  <number_encoded_amino_acids>150</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FFDPSLLFIAVLKFWFLSFEICCSKMVRLQPDPFLNELTSMFERTTEHGSVWVTLKHSSDKSKAQRNKMKTAGETLEFKCLIRATDGKKNISTMVGAKDHQRFQASYAILLKARLTALKKRERKDKRKATDSDKKMDISKKKSAAAKAST*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="-" PGL_start="82753" PGL_stop="78194"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="82753" e_stop="82350"/>
            <exon e_start="81915" e_stop="81868"/>
            <exon e_start="81436" e_stop="81044"/>
            <exon e_start="78221" e_stop="78194"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.774" acc_prob="0.988" e_score="0.985"/>
          <exon-intron don_prob="0.803" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.907" acc_prob="0.965" e_score="0.987"/>
          <exon-only e_score="0.893"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.985">
            <gDNA_exon_boundary e_start="82753" e_stop="82350" e_length="404"/>
          </exon>
          <intron i_serial="1" don_prob="0.774" acc_prob="0.988">
            <gDNA_intron_boundary i_start="82349" i_stop="81916" i_length="434"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="81915" e_stop="81868" e_length="48"/>
          </exon>
          <intron i_serial="2" don_prob="0.803" acc_prob="0.000">
            <gDNA_intron_boundary i_start="81867" i_stop="81437" i_length="431"/>
          </intron>
          <exon e_serial="3" e_score="0.987">
            <gDNA_exon_boundary e_start="81436" e_stop="81044" e_length="393"/>
          </exon>
          <intron i_serial="3" don_prob="0.907" acc_prob="0.965">
            <gDNA_intron_boundary i_start="81043" i_stop="78222" i_length="2822"/>
          </intron>
          <exon e_serial="4" e_score="0.893">
            <gDNA_exon_boundary e_start="78221" e_stop="78194" e_length="28"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82753" stop="82350"/>
              <exon start="81915" stop="81868"/>
              <exon start="81436" stop="81044"/>
              <exon start="78221" stop="78194"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U318313" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AAGTTTCAGACTTGTCGCCCCAAATGGATGGGGTTCAAATCCTACAACTCTATCCTAGAAACAAAATGGGGGAATAAACCAAAGGACTAAAGTTTCATGTAGAGGCTTTAGCAGCAGCAGATTTCTTTTTCGAAATATCCATCTTTTTGTCAGAATCAGTAGCCTTCCTCTTGTCCTTCCTCTCCCTCTTCTTTAGTGCAGTCAACCGGGCCTTCAGCAAAATTGCATAAGATGCTTGGAAACGCTGGTGATCTTTTGCTCCAACCTGTTAGTTCAATATAATCAAGTGCATCATTAGAGCCACAAGAAGTGAAATGATGCATCAAAACATAAACAACAATTGTATAAACTACATAAGCAACAAGCAAAGACGTGAATACAAATAAGATGACACCACCCATAAG : GTGAGCGAAATTTAGAACAGAAGTGTGCAACATGCAAATGCTGAAAGG : GCTAGCTAACAGACATACCAGACAAAGTTCTATATTAAAGGGAAGTTCACATTCTTAAAGACACGTGATGGGCCGTGTCAGCCCAAACTTCATGCCATGTGTACCATGTAGAAAACCTTGTCAATTTCTCAATTTCAAGAAGTAACAAATCAAAGGAGTATATGGATGTGCAGGTGAGCTATATTCAGAACAAGTGTGCAACTCGCAAATACTGAAAGGGCTAGCTAGCGGACATACCCAACCAAAGTTCTATATTAAAGCGGCTCTCACATTCTTAGATACATGACGGGCTGTTTCAGCCCAAACTCCATGCCGTGTGTTGTACCATGTGGAAAACCTTGTCAATTTCCCAATTTTAAGAAGTAACAAATCAAAGAGTATTTGCATGTGCAG : CAAACGTGCCATCGTCTTCAACTCAACA</gDNA_template>
            <first_frame> K  F  Q  T  C  R  P  K  W  M  G  F  K  S  Y  N  S  I  L  E  T  K  W  G  N  K  P  K  D  *  S  F  M  *  R  L  *  Q  Q  Q  I  S  F  S  K  Y  P  S  F  C  Q  N  Q  *  P  S  S  C  P  S  S  P  S  S  L  V  Q  S  T  G  P  S  A  K  L  H  K  M  L  G  N  A  G  D  L  L  L  Q  P  V  S  S  I  *  S  S  A  S  L  E  P  Q  E  V  K  *  C  I  K  T  *  T  T  I  V  *  T  T  *  A  T  S  K  D  V  N  T  N  K  M  T  P  P  I  R :   *  A  K  F  R  T  E  V  C  N  M  Q  M  L  K  G :   L  A  N  R  H  T  R  Q  S  S  I  L  K  G  S  S  H  S  *  R  H  V  M  G  R  V  S  P  N  F  M  P  C  V  P  C  R  K  P  C  Q  F  L  N  F  K  K  *  Q  I  K  G  V  Y  G  C  A  G  E  L  Y  S  E  Q  V  C  N  S  Q  I  L  K  G  L  A  S  G  H  T  Q  P  K  F  Y  I  K  A  A  L  T  F  L  D  T  *  R  A  V  S  A  Q  T  P  C  R  V  L  Y  H  V  E  N  L  V  N  F  P  I  L  R  S  N  K  S  K  S  I  C  M  C  S :   K  R  A  I  V  F  N  S  T </first_frame>
            <second_frame>  S  F  R  L  V  A  P  N  G  W  G  S  N  P  T  T  L  S  *  K  Q  N  G  G  I  N  Q  R  T  K  V  S  C  R  G  F  S  S  S  R  F  L  F  R  N  I  H  L  F  V  R  I  S  S  L  P  L  V  L  P  L  P  L  L  *  C  S  Q  P  G  L  Q  Q  N  C  I  R  C  L  E  T  L  V  I  F  C  S  N  L  L  V  Q  Y  N  Q  V  H  H  *  S  H  K  K  *  N  D  A  S  K  H  K  Q  Q  L  Y  K  L  H  K  Q  Q  A  K  T  *  I  Q  I  R  *  H  H  P  *   : G  E  R  N  L  E  Q  K  C  A  T  C  K  C  *  K   : G  *  L  T  D  I  P  D  K  V  L  Y  *  R  E  V  H  I  L  K  D  T  *  W  A  V  S  A  Q  T  S  C  H  V  Y  H  V  E  N  L  V  N  F  S  I  S  R  S  N  K  S  K  E  Y  M  D  V  Q  V  S  Y  I  Q  N  K  C  A  T  R  K  Y  *  K  G  *  L  A  D  I  P  N  Q  S  S  I  L  K  R  L  S  H  S  *  I  H  D  G  L  F  Q  P  K  L  H  A  V  C  C  T  M  W  K  T  L  S  I  S  Q  F  *  E  V  T  N  Q  R  V  F  A  C  A   : A  N  V  P  S  S  S  T  Q   </second_frame>
            <third_frame>   V  S  D  L  S  P  Q  M  D  G  V  Q  I  L  Q  L  Y  P  R  N  K  M  G  E  *  T  K  G  L  K  F  H  V  E  A  L  A  A  A  D  F  F  F  E  I  S  I  F  L  S  E  S  V  A  F  L  L  S  F  L  S  L  F  F  S  A  V  N  R  A  F  S  K  I  A  *  D  A  W  K  R  W  *  S  F  A  P  T  C  *  F  N  I  I  K  C  I  I  R  A  T  R  S  E  M  M  H  Q  N  I  N  N  N  C  I  N  Y  I  S  N  K  Q  R  R  E  Y  K  *  D  D  T  T  H  K  :  V  S  E  I  *  N  R  S  V  Q  H  A  N  A  E  R  :  A  S  *  Q  T  Y  Q  T  K  F  Y  I  K  G  K  F  T  F  L  K  T  R  D  G  P  C  Q  P  K  L  H  A  M  C  T  M  *  K  T  L  S  I  S  Q  F  Q  E  V  T  N  Q  R  S  I  W  M  C  R  *  A  I  F  R  T  S  V  Q  L  A  N  T  E  R  A  S  *  R  T  Y  P  T  K  V  L  Y  *  S  G  S  H  I  L  R  Y  M  T  G  C  F  S  P  N  S  M  P  C  V  V  P  C  G  K  P  C  Q  F  P  N  F  K  K  *  Q  I  K  E  Y  L  H  V  Q  :  Q  T  C  H  R  L  Q  L  N  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C06HBa0167M06.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="+" PGL_start="84544" PGL_stop="85936"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="84544" e_stop="85021"/>
            <exon e_start="85627" e_stop="85936"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.000" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="84544" e_stop="85021" e_length="478"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="85022" i_stop="85626" i_length="605"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="85627" e_stop="85936" e_length="310"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="84544" stop="85021"/>
              <exon start="85627" stop="85936"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U328752" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TCAATTTTTTTTTAAAAAAAAATGATAAATTTTTCTTCAAGAATTTTGTTGATTTTGTTATTAACATGTACTATAGCTATAATTATAATTCCAAAATTGGCTTCTACACAATATTGTGGATGTACAGAAGGATTGTGTTGCAGTAGATGGGGTTATTGTGGCAGTGGAAAAGCTTATTGTGGACAAGGTTGTCAAGGAGGGCCTTGTTATAATTCTTCAACCAAAAATTACAATCATAATATTAATAACAATAATAATAATAATACCAATAGAGTTTCTGATATTGTTAGTGAATCATTTTTCAATGGAATTGCAAATCAAGCTGCTTCAAATTGTGAAGGCAAAGGATTTTACACGAGATCTGTATTTCTTGAAGCTTTAAAGTCTTATCCTGAATTCGCAACTATCGGTTTTTCTGATGATGATAATAAGCGCGAAATTGCTGCTTTCTTTGCTCATGTCACACATGAGACCGGAC : AAATGTGTTACATAAATGAGATAAATGGTTCATCTAGGGACTATTGTGACATGACAAACTCAGAGTACCCCTGTGTTTCTGGCCAAAATTATTATGGTAGAGGACCAATACAACTATCATGGAACTTCAACTATGGTCCTGCTGGAAAAGACATCGGATTCGATGGGCTTAACGACCCCGATATTGTGTCTAGAGACAGTTTAATATCATTCAAAACTGCCCTGTGGTACTGGATGAACACTTGCCAACCTCTCTTAAGTTCTGGGCAAGGTTTCGGGGCAACGATTCGAGCTATTAATGGTCCTCTTGA</gDNA_template>
            <first_frame> S  I  F  F  *  K  K  M  I  N  F  S  S  R  I  L  L  I  L  L  L  T  C  T  I  A  I  I  I  I  P  K  L  A  S  T  Q  Y  C  G  C  T  E  G  L  C  C  S  R  W  G  Y  C  G  S  G  K  A  Y  C  G  Q  G  C  Q  G  G  P  C  Y  N  S  S  T  K  N  Y  N  H  N  I  N  N  N  N  N  N  N  T  N  R  V  S  D  I  V  S  E  S  F  F  N  G  I  A  N  Q  A  A  S  N  C  E  G  K  G  F  Y  T  R  S  V  F  L  E  A  L  K  S  Y  P  E  F  A  T  I  G  F  S  D  D  D  N  K  R  E  I  A  A  F  F  A  H  V  T  H  E  T  G   : Q  M  C  Y  I  N  E  I  N  G  S  S  R  D  Y  C  D  M  T  N  S  E  Y  P  C  V  S  G  Q  N  Y  Y  G  R  G  P  I  Q  L  S  W  N  F  N  Y  G  P  A  G  K  D  I  G  F  D  G  L  N  D  P  D  I  V  S  R  D  S  L  I  S  F  K  T  A  L  W  Y  W  M  N  T  C  Q  P  L  L  S  S  G  Q  G  F  G  A  T  I  R  A  I  N  G  P  L   </first_frame>
            <second_frame>  Q  F  F  F  K  K  K  *  *  I  F  L  Q  E  F  C  *  F  C  Y  *  H  V  L  *  L  *  L  *  F  Q  N  W  L  L  H  N  I  V  D  V  Q  K  D  C  V  A  V  D  G  V  I  V  A  V  E  K  L  I  V  D  K  V  V  K  E  G  L  V  I  I  L  Q  P  K  I  T  I  I  I  L  I  T  I  I  I  I  I  P  I  E  F  L  I  L  L  V  N  H  F  S  M  E  L  Q  I  K  L  L  Q  I  V  K  A  K  D  F  T  R  D  L  Y  F  L  K  L  *  S  L  I  L  N  S  Q  L  S  V  F  L  M  M  I  I  S  A  K  L  L  L  S  L  L  M  S  H  M  R  P  D  :  K  C  V  T  *  M  R  *  M  V  H  L  G  T  I  V  T  *  Q  T  Q  S  T  P  V  F  L  A  K  I  I  M  V  E  D  Q  Y  N  Y  H  G  T  S  T  M  V  L  L  E  K  T  S  D  S  M  G  L  T  T  P  I  L  C  L  E  T  V  *  Y  H  S  K  L  P  C  G  T  G  *  T  L  A  N  L  S  *  V  L  G  K  V  S  G  Q  R  F  E  L  L  M  V  L  L  </second_frame>
            <third_frame>   N  F  F  L  K  K  N  D  K  F  F  F  K  N  F  V  D  F  V  I  N  M  Y  Y  S  Y  N  Y  N  S  K  I  G  F  Y  T  I  L  W  M  Y  R  R  I  V  L  Q  *  M  G  L  L  W  Q  W  K  S  L  L  W  T  R  L  S  R  R  A  L  L  *  F  F  N  Q  K  L  Q  S  *  Y  *  *  Q  *  *  *  *  Y  Q  *  S  F  *  Y  C  *  *  I  I  F  Q  W  N  C  K  S  S  C  F  K  L  *  R  Q  R  I  L  H  E  I  C  I  S  *  S  F  K  V  L  S  *  I  R  N  Y  R  F  F  *  *  *  *  *  A  R  N  C  C  F  L  C  S  C  H  T  *  D  R  T :   N  V  L  H  K  *  D  K  W  F  I  *  G  L  L  *  H  D  K  L  R  V  P  L  C  F  W  P  K  L  L  W  *  R  T  N  T  T  I  M  E  L  Q  L  W  S  C  W  K  R  H  R  I  R  W  A  *  R  P  R  Y  C  V  *  R  Q  F  N  I  I  Q  N  C  P  V  V  L  D  E  H  L  P  T  S  L  K  F  W  A  R  F  R  G  N  D  S  S  Y  *  W  S  S  * </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0167M06.1" strand="+"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="84559" stop="85021"/>
                    <exon start="85627" stop="85934"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>771</number_coding_nucleotides>
                  <number_encoded_amino_acids>257</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KKMINFSSRILLILLLTCTIAIIIIPKLASTQYCGCTEGLCCSRWGYCGSGKAYCGQGCQGGPCYNSSTKNYNHNINNNNNNNTNRVSDIVSESFFNGIANQAASNCEGKGFYTRSVFLEALKSYPEFATIGFSDDDNKREIAAFFAHVTHETGQMCYINEINGSSRDYCDMTNSEYPCVSGQNYYGRGPIQLSWNFNYGPAGKDIGFDGLNDPDIVSRDSLISFKTALWYWMNTCQPLLSSGQGFGATIRAINGPL</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 38 chains have been computed
$ 
$ memory statistics:
$ 19144 bytes spliced alignments in total
$ 9 spliced alignments have been stored
$ 2127 bytes was the average size of a spliced alignment
$ 13600 bytes predicted gene locations in total
$ 7 predicted gene locations have been stored
$ 1942 bytes was the average size of a predicted gene location
$ 1 megabytes was the average size of the backtrace matrix
$ 45 backtrace matrices have been allocated
$ 
$ date finished: 2009-01-16 20:39:09
-->
