<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-01-16 08:52:28"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C06HBa0246P13-2wghE/GenomeThreader_SGN_U_tomato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C06HBa0246P13-2wghE/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0246P13-2wghE/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U329351" ref_strand="+" ref_description="SGN-U329351        Tomato 200607 #1 [3 ESTs aligned]">
      <seq>ccttctggagactataattctagcagatttatttccttctttagtttttacttcccttcatcaactattatgagcttctaatctgctagcttacataacaaagctacaatatttcctttttggtaagtttcaaaaggcaaaaggaaaaggactagaataaaatcttggcaatatttagctacttggtcaggttagaatgaacatagaaatgtacaaaagatacctcttgcagaacattatccagttgcctcagcagtcaatctgttttcatgtgattgtattcagttgagacccttaaatcacttaggactcctttttaagaccataaaacatagagcagcaaatgcaaaactgtcggagtaactaaaagaacgagaacaaagctgatccattgatagtaagacttgctagatgcaccatttgaaataaatttgagctttatttgcgctttgtacttaaaatctcattggaccttagagctattttgcgcttttcgcttttgataacactgttgtcaggttaagtagaaaattgatgactctcttgatcgatgtaaggctcgtttggtggccaaggttatacaaactcttatggtgtggactctggtgagacattcaatcaattggttcattcctacaactgttagactggtgttttcccttgttacctcatcttatgaatggcatattcattggtctgacattaacaatacctttcttaatggtttattgactctgactgtttatatggagcaaccaatacaagaaaaacgctatggggactcgggttggagtgtagcgtaactaagaaattcattccatttagagcgggcacgggcacgggctaggggctacgggtgggaagattggtcattagaccacgactatcatcaacttgatgcactttgtcggtcggattaatgagtgaaggacctaattattagtgactttaaaattcttttttttcttttcgaaatttgtaattacccttcattattaacatttgcggatgaatttatttttcttactcaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0246P13-2wghE/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0246P13.1" temp_strand="-" temp_description="C06HBa0246P13.1  AC232639.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0246P13 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="6119" stop="4485"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="5819" g_stop="4782" g_length="1038"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="1038" r_length="1038" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0246P13.1" gen_strand="-" ref_id="SGN-U329351" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>1038</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0246P13.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U329351" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="5819" e_stop="4782"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCTTCTGGAGACTATAATTCTAGCAGATTTATTTCCTTCTTTAGTTTTTACTTCCCTTCATCAACTATTATGAGCTTCTAATCTGCTAGCTTACATAACAAAGCTACAATATTTCCTTTTTGGTAAGTTTCAAAAGGCAAAAGGAAAAGGACTAGAATAAAATCTTGGCAATATTTAGCTACTTGGTCAGGTTAGAATGAACATAGAAATGTACAAAAGATACCTCTTGCAGAACATTATCCAGTTGCCTCAGCAGTCAATCTGTTTTCATGTGATTGTATTCAGTTGAGACCCTTAAATCACTTAGGACTCCTTTTTAAGACCATAAAACATAGAGCAGCAAATGCAAAACTGTCGGAGTAACTAAAAGAACGAGAACAAAGCTGATCCATTGATAGTAAGACTTGCTAGATGCACCATTTGAAATAAATTTGAGCTTTATTTGCGCTTTGTACTTAAAATCTCATTGGACCTTAGAGCTATTTTGCGCTTTTCGCTTTTGATAACACTGTTGTCAGGTTAAGTAGAAAATTGATGACTCTCTTGATCGATGTAAGGCTCGTTTGGTGGCCAAGGTTATACAAACTCTTATGGTGTGGACTCTGGTGAGACATTCAATCAATTGGTTCATTCCTACAACTGTTAGACTGGTGTTTTCCCTTGTTACCTCATCTTATGAATGGCATATTCATTGGTCTGACATTAACAATACCTTTCTTAATGGTTTATTGACTCTGACTGTTTATATGGAGCAACCAATACAAGAAAAACGCTATGGGGACTCGGGTTGGAGTGTAGCGTAACTAAGAAATTCATTCCATTTAGAGCGGGCACGGGCACGGGCTAGGGGCTACGGGTGGGAAGATTGGTCATTAGACCACGACTATCATCAACTTGATGCACTTTGTCGGTCGGATTAATGAGTGAAGGACCTAATTATTAGTGACTTTAAAATTCTTTTTTTTCTTTTCGAAATTTGTAATTACCCTTCATTATTAACATTTGCGGATGAATTTATTTTTCTTACTCAAAATAGGA</genome_strand>
        <mrna_strand>CCTTCTGGAGACTATAATTCTAGCAGATTTATTTCCTTCTTTAGTTTTTACTTCCCTTCATCAACTATTATGAGCTTCTAATCTGCTAGCTTACATAACAAAGCTACAATATTTCCTTTTTGGTAAGTTTCAAAAGGCAAAAGGAAAAGGACTAGAATAAAATCTTGGCAATATTTAGCTACTTGGTCAGGTTAGAATGAACATAGAAATGTACAAAAGATACCTCTTGCAGAACATTATCCAGTTGCCTCAGCAGTCAATCTGTTTTCATGTGATTGTATTCAGTTGAGACCCTTAAATCACTTAGGACTCCTTTTTAAGACCATAAAACATAGAGCAGCAAATGCAAAACTGTCGGAGTAACTAAAAGAACGAGAACAAAGCTGATCCATTGATAGTAAGACTTGCTAGATGCACCATTTGAAATAAATTTGAGCTTTATTTGCGCTTTGTACTTAAAATCTCATTGGACCTTAGAGCTATTTTGCGCTTTTCGCTTTTGATAACACTGTTGTCAGGTTAAGTAGAAAATTGATGACTCTCTTGATCGATGTAAGGCTCGTTTGGTGGCCAAGGTTATACAAACTCTTATGGTGTGGACTCTGGTGAGACATTCAATCAATTGGTTCATTCCTACAACTGTTAGACTGGTGTTTTCCCTTGTTACCTCATCTTATGAATGGCATATTCATTGGTCTGACATTAACAATACCTTTCTTAATGGTTTATTGACTCTGACTGTTTATATGGAGCAACCAATACAAGAAAAACGCTATGGGGACTCGGGTTGGAGTGTAGCGTAACTAAGAAATTCATTCCATTTAGAGCGGGCACGGGCACGGGCTAGGGGCTACGGGTGGGAAGATTGGTCATTAGACCACGACTATCATCAACTTGATGCACTTTGTCGGTCGGATTAATGAGTGAAGGACCTAATTATTAGTGACTTTAAAATTCTTTTTTTTCTTTTCGAAATTTGTAATTACCCTTCATTATTAACATTTGCGGATGAATTTATTTTTCTTACTCAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0246P13-2wghE/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U326772" ref_strand="+" ref_description="SGN-U326772        Tomato 200607 #1 [4 ESTs aligned] arabidopsis/peptide: | Symbol: EMB2739 | expressed protein | chr4:8374387-8375958 FORWARD | Aliases: DL3335W, FCAALL.260, EMB2739, EMBRYO DEFECTIVE 2739(evalue: 1e-31, score=134) genbank/nr: expressed(evalue: 6e-38, score=160)">
      <seq>ttacccagatgggctgtgattggttggctattgacgtcgtgcaggaagagttatgtccaagcaaacttgaagctcgcattgttttatgattggcttttctatgatgaaaccactgataatgtaatgaacattgagcctgcaattcttttgatggtgaactctatacccaattatattgaagttacccgtactcttctcgagttcctactaattgtggttgacaactatgatattgagaggaaggagatagtctccagaggggtgtcaacagctctttctacactagttaaaagaggagttgttagttcacttgatgttttgactcgttgtgacatgatagcaccagttcatagggaaatgtttggaaaattggtattggtcatgcaaggtatccattcccaaaaaaataggatcagccagtatcatccatgatatatcaccaccacctagccatttgctctcatcaagcttgggatcccaacaccctaacagggtgaactgtaattaattgtgtcatcacaggcatatacagggaagatctgttgatgcatcactttcgcctcccaaagaattgcttgtgatccttttgtcccaacaggcggttaagttccactcaactggatacaagtttcaaggagaagtttgaaatcaaggtgataggagaaacatctctttcgcctcccaaagaattgcttgtgatctttttgccccaatagctaaagttggactcaagtgatgaaagtttcaaggagaagttcaaaatcaaggtgataggaagtttttctgggtaattcttgatacctgaagatttgggtatgaaatcaaggtcttctttgaagtatctacatcttctgtccatagaaatctcctacataggctctcaatgcaagctttctttggcaactgagaccaaaattactctacttttattgcatttggactttattttcaatttgctggttctgaaagttacggctactgagtagtttctagccttgaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0246P13-2wghE/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0246P13.1" temp_strand="-" temp_description="C06HBa0246P13.1  AC232639.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0246P13 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="16380" stop="14102"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16080" g_stop="15275" g_length="806"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="807" r_length="807" r_score="0.998"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="15274" i_stop="14596" i_length="679">
            <donor d_prob="0.969" d_score="1.00"/>
            <acceptor a_prob="0.906" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="14595" g_stop="14395" g_length="201"/>
          <reference_exon_boundary r_type="cDNA" r_start="808" r_stop="1008" r_length="201" r_score="0.975"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0246P13.1" gen_strand="-" ref_id="SGN-U326772" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>1007</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0246P13.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U326772" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16080" e_stop="15275"/>
          <exon e_start="14595" e_stop="14395"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTACCCAGATGGGCTGTGATTGGTTGGCTATTGACGTCGTGCAGGAAGAGTTATGTCCAAGCAAACTTGAAGCTCGCATTGTTTTATGATTGGCTTTTCTATGATGAAACCACTGATAATGTAATGAACATTGAGCCTGCAATTCTTTTGATGGTGAACTCTATACCCAATTATATTGAAGTTACCCGTACTCTTCTCGAGTTCCTACTAATTGTGGTTGACAACTATGATATTGAGAGGAAGGAGATAGTCTCCAGAGGGGTGTCAACAGCTCTTTCTACACTAGTTAAAAGAGGAGTTGTTAGTTCACTTGATGTTTTGACTCGTTGTGACATGATAGCACCAGTTCATAGGGAAATGTTTGGAAAATTGGTATTGGTCATGCAAGGTATCCATTCCC-AAAAAATAGGATCAGCCAGTATCATCCATGATATATCACCACCACCTAGCCATTTGCTCTCATCAAGCTTGGGATCCCAACACCCTAACAGGGTGAACTGTAATTAATTGTGTCATCACAGGCATATACAGGGAAGATCTGTTGATGCATCACTTTCGCCTCCCAAAGAATTGCTTGTGATCCTTTTGTCCCAACAGGCGGTTAAGTTCCACTCAACTGGATACAAGTTTCAAGGAGAAGTTTGAAATCAAGGTGATAGGAGAAACATCTCTTTCGCCTCCCAAAGAATTGCTTGTGATCTTTTTGCCCCAATAGCTAAAGTTGGACTCAAGTGATGAAAGTTTCAAGGAGAAGTTCAAAATCAAGGTGATAGGAAGTTTTTCTGGGTAATTCTTGATACCTGAAGGTAAAAATATCCTCATCATGTTGCTATATGTTTCTTTAGGTCTTAAGAGATGCACATTCTTCTCATTCTTATGTTTATATCGGTATTCTCTATTTCCGGAGTAGCTCTCTTTTTGTCAATAGTTCTGCATTCTGTAATTGTCAAATCACTTACACAGGGATAAACAACTTGAACAACTCATCTTTGATGAGACTTGGTTGTCTCATCTGTGTGAGATGTGATCACAATTTTGTGTTGTAGAGGACTCAGGGACAAGATAGGGTTCTCCCAACCTCACTGTTACTATACAACCTCTTATATAATATGGCCAGATAGAAGAGAAATAGAAGTTAGGAACATACATGTCTAAATTTGGTCATGGAAAAGCCTACTAAAGCTGCTCTTACAGAATTTTTGGTGGCTTGATAAAATGAAACTAACAAGTGTATAATTTTGACAAGTTTCTTAACTAACAGGCAAAATGTTGACATTTAGTATATATGTTGTGATTTCCCCCTTTCATAATTCTGTAGAGCTATGGAATCAAAATAGATAGAATTTTGAGTAGTTAATAGTATAGATAGATATTCCTGATTGAATTCCACATCCTTTTTTTTCTTTTTGCTTGCGTTCCGAAGAAGCTTACAAATTGCAGCTTTGTTTCAAGCTTGTATGTCTGATATATTGAATCCTCCTGCAGATTTGGGTATGAAATCAAGGTCTTCTTTGAAGTATCTACATCTTCTGTCCATAGAAATCTCCTACATAGGCTCTCAATGCAAGCTTTCTTTGGCAACTGAGACCAAAATTACTCTACTTTTATTGCATTTGGACTTTATTTTCAATTTGCTGGTTCTGAAAGTTACGGCTACTGAGTAGTTTCTAGCCTTGAAATCTTAAT</genome_strand>
        <mrna_strand>TTACCCAGATGGGCTGTGATTGGTTGGCTATTGACGTCGTGCAGGAAGAGTTATGTCCAAGCAAACTTGAAGCTCGCATTGTTTTATGATTGGCTTTTCTATGATGAAACCACTGATAATGTAATGAACATTGAGCCTGCAATTCTTTTGATGGTGAACTCTATACCCAATTATATTGAAGTTACCCGTACTCTTCTCGAGTTCCTACTAATTGTGGTTGACAACTATGATATTGAGAGGAAGGAGATAGTCTCCAGAGGGGTGTCAACAGCTCTTTCTACACTAGTTAAAAGAGGAGTTGTTAGTTCACTTGATGTTTTGACTCGTTGTGACATGATAGCACCAGTTCATAGGGAAATGTTTGGAAAATTGGTATTGGTCATGCAAGGTATCCATTCCCAAAAAAATAGGATCAGCCAGTATCATCCATGATATATCACCACCACCTAGCCATTTGCTCTCATCAAGCTTGGGATCCCAACACCCTAACAGGGTGAACTGTAATTAATTGTGTCATCACAGGCATATACAGGGAAGATCTGTTGATGCATCACTTTCGCCTCCCAAAGAATTGCTTGTGATCCTTTTGTCCCAACAGGCGGTTAAGTTCCACTCAACTGGATACAAGTTTCAAGGAGAAGTTTGAAATCAAGGTGATAGGAGAAACATCTCTTTCGCCTCCCAAAGAATTGCTTGTGATCTTTTTGCCCCAATAGCTAAAGTTGGACTCAAGTGATGAAAGTTTCAAGGAGAAGTTCAAAATCAAGGTGATAGGAAGTTTTTCTGGGTAATTCTTGATACCTGAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTGGGTATGAAATCAAGGTCTTCTTTGAAGTATCTACATCTTCTGTCCATAGAAATCTCCTACATAGGCTCTCAATGCAAGCTTTCTTTGGCAACTGAGACCAAAATTACTCTACTTTTATTGCATTTGGACTTTATTTTCAATTTGCTGGTTCTGAAAGTTACGGCTACTGAGTAGTTTCTAGCCTTGAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0246P13-2wghE/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U345220" ref_strand="+" ref_description="SGN-U345220        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: | Symbol: EMB2739 | expressed protein | chr4:8374387-8375958 FORWARD | Aliases: DL3335W, FCAALL.260, EMB2739, EMBRYO DEFECTIVE 2739(evalue: 6e-55, score=211) genbank/nr: gi|15233503|ref|NP_193195.1| expressed protein [Arabidopsis thaliana] gi|7452408|pir||D71408 hypothetical protein dl3335w - Arabidopsis thaliana gi|2244815|emb|CAB10238.1| hypothetical protein [Arabidopsis thaliana] gi|7268165|emb|CAB78501.1| hypothetical protein [Arabidopsis thaliana](evalue: 4e-53, score=211)">
      <seq>ttccaagtaatccaatgattgatggattgaagagaatggaggttgtattctgtgttcgacttttgagggaacaatttcttttgtgtttgaagatagggagggacttaattaggcttttgcaagacttggttcatatacctgagtttaaagccatatggagagacttgttattgaatccaagacactttggggtggatggatttaaagatatttcacaaatttaccacacaaaaactccaagttcatactttttgcttcgagtaactcctgaaatggaaactaaattgaggtttttgcttacacatgtcaagttgggtaaccaaaagaggtaccaggtttggttcgctaagaagttccttggagtacctgggagtgaagtcattttaaccgacattgttaggtttatatgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0246P13-2wghE/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0246P13.1" temp_strand="-" temp_description="C06HBa0246P13.1  AC232639.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0246P13 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="16832" stop="15822"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16532" g_stop="16122" g_length="411"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="411" r_length="411" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0246P13.1" gen_strand="-" ref_id="SGN-U345220" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>411</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0246P13.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U345220" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16532" e_stop="16122"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCCAAGTAATCCAATGATTGATGGATTGAAGAGAATGGAGGTTGTATTCTGTGTTCGACTTTTGAGGGAACAATTTCTTTTGTGTTTGAAGATAGGGAGGGACTTAATTAGGCTTTTGCAAGACTTGGTTCATATACCTGAGTTTAAAGCCATATGGAGAGACTTGTTATTGAATCCAAGACACTTTGGGGTGGATGGATTTAAAGATATTTCACAAATTTACCACACAAAAACTCCAAGTTCATACTTTTTGCTTCGAGTAACTCCTGAAATGGAAACTAAATTGAGGTTTTTGCTTACACATGTCAAGTTGGGTAACCAAAAGAGGTACCAGGTTTGGTTCGCTAAGAAGTTCCTTGGAGTACCTGGGAGTGAAGTCATTTTAACCGACATTGTTAGGTTTATATGCT</genome_strand>
        <mrna_strand>TTCCAAGTAATCCAATGATTGATGGATTGAAGAGAATGGAGGTTGTATTCTGTGTTCGACTTTTGAGGGAACAATTTCTTTTGTGTTTGAAGATAGGGAGGGACTTAATTAGGCTTTTGCAAGACTTGGTTCATATACCTGAGTTTAAAGCCATATGGAGAGACTTGTTATTGAATCCAAGACACTTTGGGGTGGATGGATTTAAAGATATTTCACAAATTTACCACACAAAAACTCCAAGTTCATACTTTTTGCTTCGAGTAACTCCTGAAATGGAAACTAAATTGAGGTTTTTGCTTACACATGTCAAGTTGGGTAACCAAAAGAGGTACCAGGTTTGGTTCGCTAAGAAGTTCCTTGGAGTACCTGGGAGTGAAGTCATTTTAACCGACATTGTTAGGTTTATATGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0246P13-2wghE/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U340612" ref_strand="+" ref_description="SGN-U340612        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: | Symbol: EMB2739 | expressed protein | chr4:8374387-8375958 FORWARD | Aliases: DL3335W, FCAALL.260, EMB2739, EMBRYO DEFECTIVE 2739(evalue: 2e-09, score=60.1) genbank/nr: gi|15233503|ref|NP_193195.1| expressed protein [Arabidopsis thaliana] gi|7452408|pir||D71408 hypothetical protein dl3335w - Arabidopsis thaliana gi|2244815|emb|CAB10238.1| hypothetical protein [Arabidopsis thaliana] gi|7268165|emb|CAB78501.1| hypothetical protein [Arabidopsis thaliana](evalue: 2e-07, score=60.1)">
      <seq>tttgcagtacctaaacaaccgccgtcacatccccgccggtggtgatttcccggcgaagcaccgaacaactcgatcagcaaggtcctaagtttgtttctgaaaataattgtgtaaggtacgcttatgtagctgtttttggtgtttaatcttgcatctattgtgattcattcactacaaatggccttaaagattactgaaagaggaatccatgaagctgaaaatccaattgaagtgtcttttagagaagcttttgagcttcttaaaccccaactaaacccaccatttacc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0246P13-2wghE/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0246P13.1" temp_strand="-" temp_description="C06HBa0246P13.1  AC232639.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0246P13 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="17556" stop="16669"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17256" g_stop="16969" g_length="288"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="288" r_length="288" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0246P13.1" gen_strand="-" ref_id="SGN-U340612" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>288</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0246P13.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U340612" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17256" e_stop="16969"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTGCAGTACCTAAACAACCGCCGTCACATCCCCGCCGGTGGTGATTTCCCGGCGAAGCACCGAACAACTCGATCAGCAAGGTCCTAAGTTTGTTTCTGAAAATAATTGTGTAAGGTACGCTTATGTAGCTGTTTTTGGTGTTTAATCTTGCATCTATTGTGATTCATTCACTACAAATGGCCTTAAAGATTACTGAAAGAGGAATCCATGAAGCTGAAAATCCAATTGAAGTGTCTTTTAGAGAAGCTTTTGAGCTTCTTAAACCCCAACTAAACCCACCATTTACC</genome_strand>
        <mrna_strand>TTTGCAGTACCTAAACAACCGCCGTCACATCCCCGCCGGTGGTGATTTCCCGGCGAAGCACCGAACAACTCGATCAGCAAGGTCCTAAGTTTGTTTCTGAAAATAATTGTGTAAGGTACGCTTATGTAGCTGTTTTTGGTGTTTAATCTTGCATCTATTGTGATTCATTCACTACAAATGGCCTTAAAGATTACTGAAAGAGGAATCCATGAAGCTGAAAATCCAATTGAAGTGTCTTTTAGAGAAGCTTTTGAGCTTCTTAAACCCCAACTAAACCCACCATTTACC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0246P13-2wghE/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U324860" ref_strand="+" ref_description="SGN-U324860        Tomato 200607 #1 [5 ESTs aligned] arabidopsis/peptide: | Symbol: None | expressed protein | chr5:25331363-25332654 REVERSE | Aliases: MDC12.6, MDC12_6(evalue: 2e-84, score=309) genbank/nr: gi|15242625|ref|NP_201115.1| expressed protein [Arabidopsis thaliana] gi|10177291|dbj|BAB10552.1| gene_id:MDC12.6~unknown protein [Arabidopsis thaliana](evalue: 1e-82, score=309)">
      <seq>aacatttaagggaggagatgaccatggcagcacaaaacttcaaaagctccatccaaatccaaccctcatttcactgtcatctccttccttcttccctaccgacaatcttcaaaatccgccacaagcctcaaaaccccatatctctcaaattccacccaatccaagcttcaaatcacaaatacatcactcccacaaaacaacagcaacaagaacaagatgatggaatccccatggaacatatcaaaaccctagtcaaattcaagtccaggcacaactacatccgggttctagaagtttctagaagagccgaccacccgttagctggttcccgtcttcttcttctcgacgcacctggtaacatccacagcatatcattcctcttcaaatcaatcaccaacgcctattacgacgttctagcaactcttcccccaattctaccacctgggccattaggaattctcgggttcggagccgggtcagctgcgaaattgattctggaattatacccacaaggtgttatccatggatacgagctagacccatctgtaatctccgtcggaagagaatatttagggctttcgaaagttgaaaaacaatacccagatcgtcttttcatctatatcagcaatgcactgaatgccagtgtgaaagatgggtattctggtctaatagttgatttgtttagtaaagggtgtttgatacctgagcttcagaacccacaaacatgggagaaattgaaagggaaactgaaaaaaggaggaaagataatggtgaatgttggagggaggtgtgtagaaccagaagacagtagaaaagatgggaaagtgataatggaagagacactaatggcaatgaataaggtttttgaaggtgaagtatttgtattgaatcttggaaatagaaagcaagaagatagcagtgttgccattgttggtggattacctgatttggagaaatggaggatttctttgcctaagcctttgagattttatgttgatatgtggaacaagtatggttgatggtgataaaaaaaaattaatgaaattccttacattggtcaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0246P13-2wghE/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0246P13.1" temp_strand="-" temp_description="C06HBa0246P13.1  AC232639.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0246P13 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="44663" stop="43003"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="44363" g_stop="43308" g_length="1056"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="1056" r_length="1056" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0246P13.1" gen_strand="-" ref_id="SGN-U324860" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>1056</cumulative_length_of_scored_exons>
        <coverage percentage="0.990" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0246P13.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U324860" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="44363" e_stop="43308"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACATTTAAGGGAGGAGATGACCATGGCAGCACAAAACTTCAAAAGCTCCATCCAAATCCAACCCTCATTTCACTGTCATCTCCTTCCTTCTTCCCTACCGACAATCTTCAAAATCCGCCACAAGCCTCAAAACCCCATATCTCTCAAATTCCACCCAATCCAAGCTTCAAATCACAAATACATCACTCCCACAAAACAACAGCAACAAGAACAAGATGATGGAATCCCCATGGAACATATCAAAACCCTAGTCAAATTCAAGTCCAGGCACAACTACATCCGGGTTCTAGAAGTTTCTAGAAGAGCCGACCACCCGTTAGCTGGTTCCCGTCTTCTTCTTCTCGACGCACCTGGTAACATCCACAGCATATCATTCCTCTTCAAATCAATCACCAACGCCTATTACGACGTTCTAGCAACTCTTCCCCCAATTCTACCACCTGGGCCATTAGGAATTCTCGGGTTCGGAGCCGGGTCAGCTGCGAAATTGATTCTGGAATTATACCCACAAGGTGTTATCCATGGATACGAGCTAGACCCATCTGTAATCTCCGTCGGAAGAGAATATTTAGGGCTTTCGAAAGTTGAAAAACAATACCCAGATCGTCTTTTCATCTATATCAGCAATGCACTGAATGCCAGTGTGAAAGATGGGTATTCTGGTCTAATAGTTGATTTGTTTAGTAAAGGGTGTTTGATACCTGAGCTTCAGAACCCACAAACATGGGAGAAATTGAAAGGGAAACTGAAAAAAGGAGGAAAGATAATGGTGAATGTTGGAGGGAGGTGTGTAGAACCAGAAGACAGTAGAAAAGATGGGAAAGTGATAATGGAAGAGACACTAATGGCAATGAATAAGGTTTTTGAAGGTGAAGTATTTGTATTGAATCTTGGAAATAGAAAGCAAGAAGATAGCAGTGTTGCCATTGTTGGTGGATTACCTGATTTGGAGAAATGGAGGATTTCTTTGCCTAAGCCTTTGAGATTTTATGTTGATATGTGGAACAAGTATGGTTGATGGTGATAAAAAAAAATTAATGAAATTCCTTACATTG</genome_strand>
        <mrna_strand>AACATTTAAGGGAGGAGATGACCATGGCAGCACAAAACTTCAAAAGCTCCATCCAAATCCAACCCTCATTTCACTGTCATCTCCTTCCTTCTTCCCTACCGACAATCTTCAAAATCCGCCACAAGCCTCAAAACCCCATATCTCTCAAATTCCACCCAATCCAAGCTTCAAATCACAAATACATCACTCCCACAAAACAACAGCAACAAGAACAAGATGATGGAATCCCCATGGAACATATCAAAACCCTAGTCAAATTCAAGTCCAGGCACAACTACATCCGGGTTCTAGAAGTTTCTAGAAGAGCCGACCACCCGTTAGCTGGTTCCCGTCTTCTTCTTCTCGACGCACCTGGTAACATCCACAGCATATCATTCCTCTTCAAATCAATCACCAACGCCTATTACGACGTTCTAGCAACTCTTCCCCCAATTCTACCACCTGGGCCATTAGGAATTCTCGGGTTCGGAGCCGGGTCAGCTGCGAAATTGATTCTGGAATTATACCCACAAGGTGTTATCCATGGATACGAGCTAGACCCATCTGTAATCTCCGTCGGAAGAGAATATTTAGGGCTTTCGAAAGTTGAAAAACAATACCCAGATCGTCTTTTCATCTATATCAGCAATGCACTGAATGCCAGTGTGAAAGATGGGTATTCTGGTCTAATAGTTGATTTGTTTAGTAAAGGGTGTTTGATACCTGAGCTTCAGAACCCACAAACATGGGAGAAATTGAAAGGGAAACTGAAAAAAGGAGGAAAGATAATGGTGAATGTTGGAGGGAGGTGTGTAGAACCAGAAGACAGTAGAAAAGATGGGAAAGTGATAATGGAAGAGACACTAATGGCAATGAATAAGGTTTTTGAAGGTGAAGTATTTGTATTGAATCTTGGAAATAGAAAGCAAGAAGATAGCAGTGTTGCCATTGTTGGTGGATTACCTGATTTGGAGAAATGGAGGATTTCTTTGCCTAAGCCTTTGAGATTTTATGTTGATATGTGGAACAAGTATGGTTGATGGTGATAAAAAAAAATTAATGAAATTCCTTACATTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0246P13-2wghE/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U320212" ref_strand="+" ref_description="SGN-U320212        Tomato 200607 #1 [12 ESTs aligned] arabidopsis/peptide: | Symbol: None | histone deacetylase, putative, similar to SP:O22446 Histone deacetylase (HD) {Arabidopsis thaliana}; contains Pfam profile PF00850: Histone deacetylase family | chr5:25332863-25335573 REVERSE | Aliases: MDC12.7, MDC12_7(evalue: 0, score=742) genbank/nr: Histone(evalue: 0, score=761)">
      <seq>ggcgattggcggccaatcggccgaattgggactcaatacagactgccgagtctctcgcaaaaatcccaaatttcattttcactctcactccgaacccaaaaatcagtggctaatggactcctccaccgtagacggcggcgcatcgcttccatcaaccggaaccgacgctaggaagcgtcgtgtctcttacttctatgagccaaccatcggcgattattactacggccaaggtcatccgatgaagccgcaccgtatcagaatggcccacaatctcatcgtaaactactacctacacaggcgtatggaaatcagtcgtccttttccggcgggagaggatgatatccgacgttttcactcgccggattatgttgacttccttgctaccgtttcaccggagactcttcatgaccatacacattcacgtcatctcaaacggtttaatgttggtgaggattgtcctgttttcgatgggctttttgggttttgtcaagcttctgctggtggatctattggggctgcggttaagcttaatcggcaggatgctgatataacgatcaactgggctggtggtctgcaccatgcaaagaaaagtgaagcttctggtttttgctatgtgaatgatattgttcttggtattcttgagctcctcaaagtccacaagcgtgtattgtacatagacattgatattcaccatggtgatggtgttgaggaggcttttttcaccacagatagagtcatgacagtatcttttcataagtttggggatttctttcctggtacggggcacatcaaagacattggtgcaaatcaggggaagtactatgccctaaatgtcccattgcatgatgggatggatgacgatagttttggtagactatttcgtcccacaatacaaaaagtcatggaggtctaccaacctgaggctgttgttcttcaatgtggggctgattcactggctggagacaggttgggttgcttcaacttgtctgtcaagggccatgccgcttgccttaggtacctcagatccttcaatgtccctctgatggtattgggtggtggaggttatactataagaaatgtcgctaggtgctggtgctatgagacagcagttgcagttggggtagaacctgaaaacaagttgccttacaacgagtattatgaatattttggcccagattatactcttcatgttgaaccaattcccatggagaatctaaattcacctagggatctggagaagatgaggaacatattgcttgagcaaatctctcagttgcctcatgcacctagtgtgccatttcagaccactccttctacaacagaagtcccagaggagaaagaggaaaatatggatcgaaggcctaaaccacggatatggaatggtgatggttatgagtctgatgctgatgaagacgagaaacctagacagcgaagttcagatagtaatcttactccagtggaatcatctgacatgagggatgtggacgaccaagccaatgcagatgacatggttgatgatcatccctagttcaaagctcttctacatcgtctcaaaatgcaatgactgatactatttttgggtcggaagtaacaagccttgctatttgacctttcgcctctcatgagcaattgttttgatgtctcttttgctgaaaatggaactagaaaaatgagttgttatagtagattgtagttagttggatataggctagtgattgatgaatgagagcacaatgctgtctctcgtaaatggaccggtgcaccacaaagtagactttgttcttatggatactgcttattacatacaaatattatcagtgttctgcaagagttatctgtgcagttctgtggatttatccatgtacttttgagacagtggttgtttcatttcttctttgaacaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0246P13-2wghE/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0246P13.1" temp_strand="-" temp_description="C06HBa0246P13.1  AC232639.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0246P13 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="49603" stop="44436"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="49290" g_stop="48671" g_length="620"/>
          <reference_exon_boundary r_type="cDNA" r_start="42" r_stop="661" r_length="620" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="48670" i_stop="47239" i_length="1432">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.954" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="47238" g_stop="46798" g_length="441"/>
          <reference_exon_boundary r_type="cDNA" r_start="662" r_stop="1102" r_length="441" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="46797" i_stop="46679" i_length="119">
            <donor d_prob="0.754" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="46678" g_stop="46536" g_length="143"/>
          <reference_exon_boundary r_type="cDNA" r_start="1103" r_stop="1245" r_length="143" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="46535" i_stop="45879" i_length="657">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="45878" g_stop="45788" g_length="91"/>
          <reference_exon_boundary r_type="cDNA" r_start="1246" r_stop="1336" r_length="91" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="45787" i_stop="45516" i_length="272">
            <donor d_prob="0.004" d_score="1.00"/>
            <acceptor a_prob="0.583" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="45515" g_stop="45376" g_length="140"/>
          <reference_exon_boundary r_type="cDNA" r_start="1337" r_stop="1476" r_length="140" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="45375" i_stop="45165" i_length="211">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="45164" g_stop="44724" g_length="441"/>
          <reference_exon_boundary r_type="cDNA" r_start="1477" r_stop="1917" r_length="441" r_score="0.975"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0246P13.1" gen_strand="-" ref_id="SGN-U320212" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>1876</cumulative_length_of_scored_exons>
        <coverage percentage="0.979" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0246P13.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U320212" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="49290" e_stop="48671"/>
          <exon e_start="47238" e_stop="46798"/>
          <exon e_start="46678" e_stop="46536"/>
          <exon e_start="45878" e_stop="45788"/>
          <exon e_start="45515" e_stop="45376"/>
          <exon e_start="45164" e_stop="44724"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACTGCCGAGTCTCTCGCAAAAATCCCAAATTTCATTTTCACTCTCACTCCGAACCCAAAAATCAGTGGCTAATGGACTCCTCCACCGTAGACGGCGGCGCATCGCTTCCATCAACCGGAACCGACGCTAGGAAGCGTCGTGTCTCTTACTTCTATGAGCCAACCATCGGCGATTATTACTACGGCCAAGGTCATCCGATGAAGCCGCACCGTATCAGAATGGCCCACAATCTCATCGTAAACTACTACCTACACAGGCGTATGGAAATCAGTCGTCCTTTTCCGGCGGGAGAGGATGATATCCGACGTTTTCACTCGCCGGATTATGTTGACTTCCTTGCTACCGTTTCACCGGAGACTCTTCATGACCATACACATTCACGTCATCTCAAACGGTTTAATGTTGGTGAGGATTGTCCTGTTTTCGATGGGCTTTTTGGGTTTTGTCAAGCTTCTGCTGGTGGATCTATTGGGGCTGCGGTTAAGCTTAATCGGCAGGATGCTGATATAACGATCAACTGGGCTGGTGGTCTGCACCATGCAAAGAAAAGTGAAGCTTCTGGTTTTTGCTATGTGAATGATATTGTTCTTGGTATTCTTGAGCTCCTCAAAGTCCACAAGGTATAAACTGCTTACTCGCTAATATTTTCATTTTCGTTGTTTCTTTAAATCCTGAATAGTTTCATAGCAATGTACATGCCATGGCTTGCTCGACCATAAGGCTTCGCTCCCAATTTATATTAGGGCACCACTTGTTCATAAAGATGTAGTTATATATATATATATATATATATTGTTAAAAAAATCTTTGAAAAGAAATTTTTGGATAGAAAGTATTTTACTAAGTACTTCTTTAATGGGTAATAATTGAGAAATGAAATAGTTTTTAGATTATTGTATTATCCTTTCTTATGTGCCTACCTATTTTGTTGCTTCATTTATACTCTGATGATTAACATGAGTCTACATTATACTTATTATTCCTATAGTTACCTTTTTCATTCTGCTTTCACTATATTTATTTTCTTAGGACTCCTTGGTAGGAGAGACAAGGGATAACTAATCCTGGATTAATTTTAGGATGAGTTTATCCCACGTTTCATTGAGATGAAACTACAGGATACTTATTCGGGAGGTGGGAGAGGGATTAGACGACTTCTTGAACTATGGAATAGAAGTGATGATACCATCATGTAGTTAATAAGGGAAAGGTGCTTTTAACTTTCTATTACTCGTCTACATTTGTTGAGTTACCTCTGTGAGGTAAGATTAAGGTCTGCGTATACCCTACCTTCCTTAGAACACACTTGTGGGATTACACGGGGTATGTTGTTTTTGCTTGTCTAAATTCAGTAATAGAAATTTCAGTGTGAATATGGTATGTGGCCCAGCCCTTGTGTATAAGTTTCTGGAAAACCATTTTGAGGAGGGTGAGGTGTACTAAGGGTAAGCATGATGCTCATGATTCATATCCTTGTCGATTGACTGGTTCAGATTTGTAGCGTTTGGTGTAACTTCAGAGAAGTTTGATGTTAAGGGGTAAATGTTACTGTCTTTAAGAGTAATTGAAGTATGGAAGCTTGCTAATAAACTTCACTTTGATTTTGCCAAATTTATGCTGGAGAAATATGGAGATGCCTGCTGTTATCCTTGTAGTAGCTGGGACAGATCTGTTCCATCTCTATGGAAGCATTAGCAAATCAAAACAAATATTGACATGTTCAAACTCAAGCTGCAATGTATTTCCAACTTTATGTGCACAATAGTTCTTATGAACTCCTCTTGTTTTACTACTACTTACTAGGTTAAGTACAACTATGTAAGATTTCTAGAAGTGGAACTTAGTTGATCTTGATCACTTGTTAATTTTTACTTATCAAGCATATTAATAATAGGATCTGAATAATTGTAGCGTGAACTGCTGAACACTGTTGCATACAATTATAAACTATAGCTTTGCAGGATCTTTTCTTTTGATTTACTTTTTGTTTTGCCTTGATTAGAGGTTGTTCTGAATTATTTTTCCTCTGAAATGCTGAGTGTTTCTGTGCAGCGTGTATTGTACATAGACATTGATATTCACCATGGTGATGGTGTTGAGGAGGCTTTTTTCACCACAGATAGAGTCATGACAGTATCTTTTCATAAGTTTGGGGATTTCTTTCCTGGTACGGGGCACATCAAAGACATTGGTGCAAATCAGGGGAAGTACTATGCCCTAAATGTCCCATTGCATGATGGGATGGATGACGATAGTTTTGGTAGACTATTTCGTCCCACAATACAAAAAGTCATGGAGGTCTACCAACCTGAGGCTGTTGTTCTTCAATGTGGGGCTGATTCACTGGCTGGAGACAGGTTGGGTTGCTTCAACTTGTCTGTCAAGGGCCATGCCGCTTGCCTTAGGTACCTCAGATCCTTCAATGTCCCTCTGATGGTATTGGGTGGTGGAGGTTATACTATAAGAAATGTCGCTAGGTGCTGGTGCTATGAGGTCTCTCTCTCTCTCTCTCTCTCTCTCTTGTTTCTTTGCGCCTTCATTTCAGATTCTCTACTATTGCTACTATTTGTTTAGAATATGTGCTAAGTATCAACTGTTTTTCTTTGTTACAGACAGCAGTTGCAGTTGGGGTAGAACCTGAAAACAAGTTGCCTTACAACGAGTATTATGAATATTTTGGCCCAGATTATACTCTTCATGTTGAACCAATTCCCATGGAGAATCTAAATTCACCTAGGGATCTGGAGAAGATGAGGTAATTTAACTATTGTTCTACTTCCTGTAGTTTGTGGGCTTTCGCCATCAGATTATCCCTTATATGGAGAAGATAGAGTTGATAGTAGATTATCCCTGATACTGGTCCATCAAATTGATGCCTCAGTGGACCCTTAGGGTGGCCTAGTGGTTTGGGCTTGGGACTTCCATATGGAGGTCTCAAGTCCGAAACCCCTTGCCAGCGAAAGCAGGGGTAACGTCTTCTGGGCTGAGCTAGCGGGTTACTTCTCCTGTGTCGTTTGCGAGATATTGCATAGGAGCGAAGTTTTATCCTTTGTGCACCCAAAGGGTAGCGGCTGCCCTTCCCCGGTTATCAAAAAAGAAAATTGATGCCTCAGTGGGTGTATATGAGACAAATTCTGTTGTTCTGTCTGTAACTAGATTATACTAGTATGACAGCAAGAGTATCGGTTGATTGTGTTTATTTTTTGTTAATGATGGGCAACTATTTTACTCTTTAAACATTTTTTTTGAAATATTATGCTGAGACATACATTTTCTCTCTTATCCATAAGTTTCTCACATTCTTCTTCACTCAACTGCTGAACTCAAACAATTGTTTACCTCTACCTTTTTTCTTCTATAGAGAAAGGCAATTCTTTTGACATTACCTGACATAATTACTTGGTGGCTGCAGGAACATATTGCTTGAGCAAATCTCTCAGTTGCCTCATGCACCTAGTGTGCCATTTCAGACCACTCCTTCTACAACAGAAGTCCCAGAGGAGGTTAGTGGCACCTTGAACATTAAATTGTTTGGTGGGAGGGATAAGAATAAATAGTCCTGGGATAAAATTTAGATGTCCCGTTTGGTCGACATGTTTGGGATAACTTATCCCACCATTTATAGCATAGTGATGGGATAAGTTATCCCATATACATGGTGGATAAGTTATTACAGGATTACTAATCCAGGATAGTTAATCCTGGGATAACTAGTTTCCAACCAAACGGTTCCCAAGTGTCAAGACCCATCTTATACTAGAACTACTGATTGCAGAAAGAGGAAAATATGGATCGAAGGCCTAAACCACGGATATGGAATGGTGATGGTTATGAGTCTGATGCTGATGAAGACGAGAAACCTAGACAGCGAAGTTCAGATAGTAATCTTACTCCAGTGGAATCATCTGACATGAGGTATGGGCTCAAGTTGCATTGAGTACCTTTGTGAAGTTCCAAATATATGTGTGTGTTTTCTACGCACGCCTGCATATCTGATTGTGTCTTTACATTTTGGGAAGTCGTTACTTTTAAATCTTACTGGTTTGCACCTTGTAATGTGCAAATGACTGTTGTGGGACCAGCCTAGTAGAATATTTAGATTAAAGTGCTATGGCTTGTGATGCAGGGATGTGGACGACCAAGCCAATGCAGATGACATGGTTGATGATCATCCCTAGTTCAAAGCTCTTCTACATCGTCTCAAAATGCAATGACTGATACTATTTTTGGGTCGGAAGTAACAAGCCTTGCTATTTGACCTTTCGCCTCTCATGAGCAATTGTTTTGATGTCTCTTTTGCTGAAAATGGAACTAGAAAAATGAGTTGTTATAGTAGATTGTAGTTAGTTGGATATAGGCTAGTGATTGATGAATGAGAGCACAATGCTGTCTCTCGTAAATGGACCGGTGCACCACAAAGTAGACTTTGTTCTTATGGATACTGCTTATTACATACAAATATTATCAGTGTTCTGCAAGAGTTATCTGTGCAGTTCTGTGGATTTATCCATGTACTTTTGAGACAGTGGTTGTTTCATTTCTTCTTTGAACAAGATTATTGTTCATC</genome_strand>
        <mrna_strand>ACTGCCGAGTCTCTCGCAAAAATCCCAAATTTCATTTTCACTCTCACTCCGAACCCAAAAATCAGTGGCTAATGGACTCCTCCACCGTAGACGGCGGCGCATCGCTTCCATCAACCGGAACCGACGCTAGGAAGCGTCGTGTCTCTTACTTCTATGAGCCAACCATCGGCGATTATTACTACGGCCAAGGTCATCCGATGAAGCCGCACCGTATCAGAATGGCCCACAATCTCATCGTAAACTACTACCTACACAGGCGTATGGAAATCAGTCGTCCTTTTCCGGCGGGAGAGGATGATATCCGACGTTTTCACTCGCCGGATTATGTTGACTTCCTTGCTACCGTTTCACCGGAGACTCTTCATGACCATACACATTCACGTCATCTCAAACGGTTTAATGTTGGTGAGGATTGTCCTGTTTTCGATGGGCTTTTTGGGTTTTGTCAAGCTTCTGCTGGTGGATCTATTGGGGCTGCGGTTAAGCTTAATCGGCAGGATGCTGATATAACGATCAACTGGGCTGGTGGTCTGCACCATGCAAAGAAAAGTGAAGCTTCTGGTTTTTGCTATGTGAATGATATTGTTCTTGGTATTCTTGAGCTCCTCAAAGTCCACAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTGTATTGTACATAGACATTGATATTCACCATGGTGATGGTGTTGAGGAGGCTTTTTTCACCACAGATAGAGTCATGACAGTATCTTTTCATAAGTTTGGGGATTTCTTTCCTGGTACGGGGCACATCAAAGACATTGGTGCAAATCAGGGGAAGTACTATGCCCTAAATGTCCCATTGCATGATGGGATGGATGACGATAGTTTTGGTAGACTATTTCGTCCCACAATACAAAAAGTCATGGAGGTCTACCAACCTGAGGCTGTTGTTCTTCAATGTGGGGCTGATTCACTGGCTGGAGACAGGTTGGGTTGCTTCAACTTGTCTGTCAAGGGCCATGCCGCTTGCCTTAGGTACCTCAGATCCTTCAATGTCCCTCTGATGGTATTGGGTGGTGGAGGTTATACTATAAGAAATGTCGCTAGGTGCTGGTGCTATGAG.......................................................................................................................ACAGCAGTTGCAGTTGGGGTAGAACCTGAAAACAAGTTGCCTTACAACGAGTATTATGAATATTTTGGCCCAGATTATACTCTTCATGTTGAACCAATTCCCATGGAGAATCTAAATTCACCTAGGGATCTGGAGAAGATGAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACATATTGCTTGAGCAAATCTCTCAGTTGCCTCATGCACCTAGTGTGCCATTTCAGACCACTCCTTCTACAACAGAAGTCCCAGAGGAG................................................................................................................................................................................................................................................................................AAAGAGGAAAATATGGATCGAAGGCCTAAACCACGGATATGGAATGGTGATGGTTATGAGTCTGATGCTGATGAAGACGAGAAACCTAGACAGCGAAGTTCAGATAGTAATCTTACTCCAGTGGAATCATCTGACATGAG...................................................................................................................................................................................................................GGATGTGGACGACCAAGCCAATGCAGATGACATGGTTGATGATCATCCCTAGTTCAAAGCTCTTCTACATCGTCTCAAAATGCAATGACTGATACTATTTTTGGGTCGGAAGTAACAAGCCTTGCTATTTGACCTTTCGCCTCTCATGAGCAATTGTTTTGATGTCTCTTTTGCTGAAAATGGAACTAGAAAAATGAGTTGTTATAGTAGATTGTAGTTAGTTGGATATAGGCTAGTGATTGATGAATGAGAGCACAATGCTGTCTCTCGTAAATGGACCGGTGCACCACAAAGTAGACTTTGTTCTTATGGATACTGCTTATTACATACAAATATTATCAGTGTTCTGCAAGAGTTATCTGTGCAGTTCTGTGGATTTATCCATGTACTTTTGAGACAGTGGTTGTTTCATTTCTTCTTTGAACAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0246P13-2wghE/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U331819" ref_strand="+" ref_description="SGN-U331819        Tomato 200607 #1 [2 ESTs aligned]">
      <seq>aaagaagatgcaagttttgtacatttctaggtatatataagaagatgaaattttacaaaattttagatatggtggaacacatcaagattttccccactcaatgtattattattattactgtaattttcttcattcttgataccaacataaggatactgaataagagaatcaattttgttgtcagcatcccattccaacatttcattcatctgaattccaacagaattgtaatggctaatcatagtatttgaactgttacttgtactcattcttgaagttgagctatcagaaatatcgctctctgttgtcatgtgtacatgttgaaaatttgagcaaaacccaaaatcttgattcccttcaatttggttgtgatgatgagcataaggtccaattggattcacacttgcttggaactcatacagaaacagaggatcaaagacctgtttactcacaagttggttttttgaaacttctgttaactctctagtaactgcttggctgttgaaatttcttttactattgaaaaaatgaaatggttgctgtatttcagctgaatctgacatatttgggagcttgggcatcagcaaacttgaggtcttatctgtacaattcggctcatttcttacttgatgattttcacttagtggcttgtgggtatttggatctatgccttgctttattagcttcctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0246P13-2wghE/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0246P13.1" temp_strand="-" temp_description="C06HBa0246P13.1  AC232639.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0246P13 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="61916" stop="60627"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="61616" g_stop="60927" g_length="690"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="690" r_length="690" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0246P13.1" gen_strand="-" ref_id="SGN-U331819" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>690</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0246P13.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U331819" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="61616" e_stop="60927"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAGAAGATGCAAGTTTTGTACATTTCTAGGTATATATAAGAAGATGAAATTTTACAAAATTTTAGATATGGTGGAACACATCAAGATTTTCCCCACTCAATGTATTATTATTATTACTGTAATTTTCTTCATTCTTGATACCAACATAAGGATACTGAATAAGAGAATCAATTTTGTTGTCAGCATCCCATTCCAACATTTCATTCATCTGAATTCCAACAGAATTGTAATGGCTAATCATAGTATTTGAACTGTTACTTGTACTCATTCTTGAAGTTGAGCTATCAGAAATATCGCTCTCTGTTGTCATGTGTACATGTTGAAAATTTGAGCAAAACCCAAAATCTTGATTCCCTTCAATTTGGTTGTGATGATGAGCATAAGGTCCAATTGGATTCACACTTGCTTGGAACTCATACAGAAACAGAGGATCAAAGACCTGTTTACTCACAAGTTGGTTTTTTGAAACTTCTGTTAACTCTCTAGTAACTGCTTGGCTGTTGAAATTTCTTTTACTATTGAAAAAATGAAATGGTTGCTGTATTTCAGCTGAATCTGACATATTTGGGAGCTTGGGCATCAGCAAACTTGAGGTCTTATCTGTACAATTCGGCTCATTTCTTACTTGATGATTTTCACTTAGTGGCTTGTGGGTATTTGGATCTATGCCTTGCTTTATTAGCTTCCTC</genome_strand>
        <mrna_strand>AAAGAAGATGCAAGTTTTGTACATTTCTAGGTATATATAAGAAGATGAAATTTTACAAAATTTTAGATATGGTGGAACACATCAAGATTTTCCCCACTCAATGTATTATTATTATTACTGTAATTTTCTTCATTCTTGATACCAACATAAGGATACTGAATAAGAGAATCAATTTTGTTGTCAGCATCCCATTCCAACATTTCATTCATCTGAATTCCAACAGAATTGTAATGGCTAATCATAGTATTTGAACTGTTACTTGTACTCATTCTTGAAGTTGAGCTATCAGAAATATCGCTCTCTGTTGTCATGTGTACATGTTGAAAATTTGAGCAAAACCCAAAATCTTGATTCCCTTCAATTTGGTTGTGATGATGAGCATAAGGTCCAATTGGATTCACACTTGCTTGGAACTCATACAGAAACAGAGGATCAAAGACCTGTTTACTCACAAGTTGGTTTTTTGAAACTTCTGTTAACTCTCTAGTAACTGCTTGGCTGTTGAAATTTCTTTTACTATTGAAAAAATGAAATGGTTGCTGTATTTCAGCTGAATCTGACATATTTGGGAGCTTGGGCATCAGCAAACTTGAGGTCTTATCTGTACAATTCGGCTCATTTCTTACTTGATGATTTTCACTTAGTGGCTTGTGGGTATTTGGATCTATGCCTTGCTTTATTAGCTTCCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0246P13-2wghE/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U343658" ref_strand="+" ref_description="SGN-U343658        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: | Symbol: None | copper amine oxidase, putative, similar to copper methylamine oxidase precursor (MAOXII) (Arthrobacter sp.) SWISS-PROT:Q07123 | chr2:17698497-17702926 REVERSE | Aliases: MHK10.21, MHK10_21(evalue: 2e-111, score=398) genbank/nr: gi|5230728|gb|AAD40979.1| peroxisomal copper-containing amine oxidase [Glycine max](evalue: 2e-110, score=401)">
      <seq>ggtgatagagtgcaaagaccgcaaacttgtacctttacttccagctgatccactgaggaattacactgtgggtgagacaagaggaggggttgaccgatgtgatgtgaaacccctacaaattattcagccagagggtccaagctttcgcgtcgatgggaactatgttcaatggcaaaagtggaatttccgagtaggtttcacccctagggagggtttggatatacactctgtggcatatcttgatggtagcaggggactaagatccatagcccataggttgagtattgtggagatggctgttccctatggggatccaaatgatccacattactgagaaaatgcatttgatgcatgagaagatggccttggaaagaatgcccattcacttaagaggggatgctattgtttatgatacatatagtactttgatgccaattttacaaattttactggaggagtagaaaccatcaaaaattgtgtatgtttgcatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0246P13-2wghE/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0246P13.1" temp_strand="-" temp_description="C06HBa0246P13.1  AC232639.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0246P13 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="65262" stop="64010"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64962" g_stop="64785" g_length="178"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="178" r_length="178" r_score="0.978"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64784" i_stop="64701" i_length="84">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.859" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="64700" g_stop="64485" g_length="216"/>
          <reference_exon_boundary r_type="cDNA" r_start="179" r_stop="394" r_length="216" r_score="0.963"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="64484" i_stop="64407" i_length="78">
            <donor d_prob="0.996" d_score="0.98"/>
            <acceptor a_prob="0.730" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="64406" g_stop="64310" g_length="97"/>
          <reference_exon_boundary r_type="cDNA" r_start="395" r_stop="491" r_length="97" r_score="0.969"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0246P13.1" gen_strand="-" ref_id="SGN-U343658" ref_strand="+">
        <total_alignment_score>0.969</total_alignment_score>
        <cumulative_length_of_scored_exons>491</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0246P13.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U343658" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64962" e_stop="64785"/>
          <exon e_start="64700" e_stop="64485"/>
          <exon e_start="64406" e_stop="64310"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGTGATAGAGTTCGAAGACCGCAAACTTGTACCTTTACTTCCAGCTGATCCACTGAGGAATTACACTGCGGGTGAGACAAGAGGAGGGGTTGACCGAAGTGATGTGAAACCCCTACAAATTATTCAGCCAGAGGGTCCAAGCTTTCGCGTCGATGGGAACTATGTTCAATGGCAAAAGGTAAATTCTTTTTCCAGTCTCATATGCAATGAAGGATTCTGCCTGTATACTAATGTGGCCGTTCTTTCACTTTATGTATGACAGTGGAATTTCCGAGTAGGTTTCACCCCTAGGGAGGGTTTGGTTATACACTCTGTGGCATATCTTGATGGTAGCAGGGGACGAAGATCCATAGCCCATAGGTTGAGTTTTGTGGAGATGGTTGTCCCCTATGGGGATCCAAATGATCCACATTACAGAAAAAATGCATTTGATGCAGGAGAAGATGGCCTTGGAAAGAATGCCCATTCACTTAAGAGGGTAATTGACAATTCTATGGTTTAGTTGTGCATTCGACTTCTTAACTGTAAATCTAATATAACTAAAACACCACTGCAGGGATGCGATTGTTTAGGATACATAAAGTACTTTGATGCCAATTTTACAAATTTTACTGGAGGAGTAGAAACCATCAAAAATTGTGTATGTTTGCATG</genome_strand>
        <mrna_strand>GGTGATAGAGTGCAAAGACCGCAAACTTGTACCTTTACTTCCAGCTGATCCACTGAGGAATTACACTGTGGGTGAGACAAGAGGAGGGGTTGACCGATGTGATGTGAAACCCCTACAAATTATTCAGCCAGAGGGTCCAAGCTTTCGCGTCGATGGGAACTATGTTCAATGGCAAAAG....................................................................................TGGAATTTCCGAGTAGGTTTCACCCCTAGGGAGGGTTTGGATATACACTCTGTGGCATATCTTGATGGTAGCAGGGGACTAAGATCCATAGCCCATAGGTTGAGTATTGTGGAGATGGCTGTTCCCTATGGGGATCCAAATGATCCACATTACTGAGAAAATGCATTTGATGCATGAGAAGATGGCCTTGGAAAGAATGCCCATTCACTTAAGAGG..............................................................................GGATGCTATTGTTTATGATACATATAGTACTTTGATGCCAATTTTACAAATTTTACTGGAGGAGTAGAAACCATCAAAAATTGTGTATGTTTGCATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0246P13-2wghE/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U320241" ref_strand="+" ref_description="SGN-U320241        Tomato 200607 #1 [11 ESTs aligned] arabidopsis/peptide: | Symbol: None | octicosapeptide/Phox/Bem1p (PB1) domain-containing protein, contains Pfam profile PF00564: PB1 domain | chr3:17878366-17878992 FORWARD | Aliases: T29H11.240(evalue: 2e-29, score=127) genbank/nr: Octicosapeptide/Phox/Bem1p(evalue: 1e-29, score=133)">
      <seq>atttctctagaagcttcttttcattcttccgaccacaatttccgatttcaattgctcttttcgcacgagcatgagtcagtctacacaaatcgtcaaattcctctacagttacggcggtagaatccttcctcgtccctccgacggcacactccgttacatcggcggttttactagagtcctttccgttgatagatctatttcatttgcagagttgatggtgaagtttggagaattgtatggatcgtctatgcgtttaaaatgtaagatgccgacagaggatttggatgttttggtatcgattacctgtgacgaagacctggctaatgtgattgaagagtacgatcgagtttcagcaatgacgaatacagagatgaagattagggcgttattatctccaataaatttgccgaaaaaggactctcgtccgtcttcgccaatgtcttgctttgattttgctgcgtcgagcttgaagcccggaaaattcgtccagttcaattcgcctccgtcgtatgcggcggcgcgtagactgttctcaccagttgtgggttacccgaccgggagacgaacagacggcgaggagctttactatccgtactgtggacaggcaggcgtcaagcctctgtataacgttgttcctatccattgccaatagaaaaaagatacccgagaggtagaggtagttacagtattgccggagagttgtttacatagatgaaacgaatctccttcccacccacaaaaaaagggtcagataaacaaaatattcatcatcacatcaaataacaaaaagactcattcaatataatattttgatgcttgattcaaattgtatattgcttgagattattgcttattcaattgtgagctcgatttaggattcgagctgatatattgttatctaaattctatgattggcgttttgttgctctgggttgtctatatggcacaatccctccatcgttgagctttacccatggtgagcaagtggtaagatctgagtacatctattatagttattcacttgttcttgttttcttgagtgttaaaacttagaacgaagggtgaagatatatacttcatttatgtgagggcttgaaatagattatggggttgtaatccatattataaatatatcttcacctctcattagatgatttaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0246P13-2wghE/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0246P13.1" temp_strand="+" temp_description="C06HBa0246P13.1  AC232639.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0246P13 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="93914" stop="95739"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="94214" g_stop="94422" g_length="209"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="209" r_length="209" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="94423" i_stop="94489" i_length="67">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="94490" g_stop="95440" g_length="951"/>
          <reference_exon_boundary r_type="cDNA" r_start="210" r_stop="1161" r_length="952" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0246P13.1" gen_strand="+" ref_id="SGN-U320241" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>1160</cumulative_length_of_scored_exons>
        <coverage percentage="0.993" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0246P13.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U320241" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="94214" e_stop="94422"/>
          <exon e_start="94490" e_stop="95440"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTTCTCTAGAAGCTTCTTTTCATTCTTCCGACCACAATTTCCGATTTCAATTGCTCTTTTCGCACGAGCATGAGTCAGTCTACACAAATCGTCAAATTCCTCTACAGTTACGGCGGTAGAATCCTTCCTCGTCCCTCCGACGGCACACTCCGTTACATCGGCGGTTTTACTAGAGTCCTTTCCGTTGATAGATCTATTTCATTTGCAGGTTTGTTTATACATTCATCACTTCGATTTTGTTTAGTTAGAAACTGATTGAAATTTGACTGATGCAGAGTTGATGGTGAAGTTTGGAGAATTGTATGGATCGTCTATGCGTTTAAAATGTAAGATGCCGACAGAGGATTTGGATGTTTTGGTATCGATTACCTGTGACGAAGACCTGGCTAATGTGATTGAAGAGTACGATCGAGTTTCAGCAATGACGAATACAGAGATGAAGATTAGGGCGTTATTATCTCCAATAAATTTGCCGAAAAAGGACTCTCGTCCGTCTTCGCCAATGTCTTGCTTTGATTTTGCTGCGTCGAGCTTGAAGCCCGGAAAATTCGTCCAGTTCAATTCGCCTCCGTCGTATGCGGCGGCGCGTAGACTGTTCTCACCAGTTGTGGGTTACCCGACCGGGAGACGAACAGACGGCGAGGAGCTTTACTATCCGTACTGTGGACAGGCAGGCGTCAAGCCTCTGTATAACGTTGTTCCTATCCATTGCCAATAGAAAAAAGATACCCGAGAGGTAGAGGTAGTTACAGTATTGCCGGAGAGTTGTTTACATAGATGAAACGAATCTCCTTCCCACCCAC-AAAAAAGGGTCAGATAAACAAAATATTCATCATCACATCAAATAACAAAAAGACTCATTCAATATAATATTTTGATGCTTGATTCAAATTGTATATTGCTTGAGATTATTGCTTATTCAATTGTGAGCTCGATTTAGGATTCGAGCTGATATATTGTTATCTAAATTCTATGATTGGCGTTTTGTTGCTCTGGGTTGTCTATATGGCACAATCCCTCCATCGTTGAGCTTTACCCATGGTGAGCAAGTGGTAAGATCTGAGTACATCTATTATAGTTATTCACTTGTTCTTGTTTTCTTGAGTGTTAAAACTTAGAACGAAGGGTGAAGATATATACTTCATTTATGTGAGGGCTTGAAATAGATTATGGGGTTGTAATCCATATTATAAATATATCTTCACCTCTCATTAGATGATTTGAAT</genome_strand>
        <mrna_strand>ATTTCTCTAGAAGCTTCTTTTCATTCTTCCGACCACAATTTCCGATTTCAATTGCTCTTTTCGCACGAGCATGAGTCAGTCTACACAAATCGTCAAATTCCTCTACAGTTACGGCGGTAGAATCCTTCCTCGTCCCTCCGACGGCACACTCCGTTACATCGGCGGTTTTACTAGAGTCCTTTCCGTTGATAGATCTATTTCATTTGCAG...................................................................AGTTGATGGTGAAGTTTGGAGAATTGTATGGATCGTCTATGCGTTTAAAATGTAAGATGCCGACAGAGGATTTGGATGTTTTGGTATCGATTACCTGTGACGAAGACCTGGCTAATGTGATTGAAGAGTACGATCGAGTTTCAGCAATGACGAATACAGAGATGAAGATTAGGGCGTTATTATCTCCAATAAATTTGCCGAAAAAGGACTCTCGTCCGTCTTCGCCAATGTCTTGCTTTGATTTTGCTGCGTCGAGCTTGAAGCCCGGAAAATTCGTCCAGTTCAATTCGCCTCCGTCGTATGCGGCGGCGCGTAGACTGTTCTCACCAGTTGTGGGTTACCCGACCGGGAGACGAACAGACGGCGAGGAGCTTTACTATCCGTACTGTGGACAGGCAGGCGTCAAGCCTCTGTATAACGTTGTTCCTATCCATTGCCAATAGAAAAAAGATACCCGAGAGGTAGAGGTAGTTACAGTATTGCCGGAGAGTTGTTTACATAGATGAAACGAATCTCCTTCCCACCCACAAAAAAAGGGTCAGATAAACAAAATATTCATCATCACATCAAATAACAAAAAGACTCATTCAATATAATATTTTGATGCTTGATTCAAATTGTATATTGCTTGAGATTATTGCTTATTCAATTGTGAGCTCGATTTAGGATTCGAGCTGATATATTGTTATCTAAATTCTATGATTGGCGTTTTGTTGCTCTGGGTTGTCTATATGGCACAATCCCTCCATCGTTGAGCTTTACCCATGGTGAGCAAGTGGTAAGATCTGAGTACATCTATTATAGTTATTCACTTGTTCTTGTTTTCTTGAGTGTTAAAACTTAGAACGAAGGGTGAAGATATATACTTCATTTATGTGAGGGCTTGAAATAGATTATGGGGTTGTAATCCATATTATAAATATATCTTCACCTCTCATTAGATGATTTAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0246P13-2wghE/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U344532" ref_strand="+" ref_description="SGN-U344532        Tomato 200607 #1 [1 ESTs aligned] genbank/nr: SJCHGC09205(evalue: 5e-06, score=54.7)">
      <seq>cttacactgacatacattgatgaggatggtgatgttgtaacacttgttgatgacgatgatctgcaggatatcacgaggcaggacctggatcccctgcgaatatctgtgacattaaactctgaaaaacttagtatatcttcaggtacatcaagtggaaattctacttccgtcagggccccacctacatttccgaacataaattcgagtgtttcggatcttctcaagtcattgccaaagtcaaaaagcaaaaaaatcctaaagcactctgcagatatggcgtctaaagcctcatcagctgcccgagaaattgctgagctttccaaagctctctctgtgactaacttatcctacttaaagcaggcttgtccagtatcgggaggtccctatgggtagtgttaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0246P13-2wghE/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0246P13.1" temp_strand="+" temp_description="C06HBa0246P13.1  AC232639.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0246P13 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="100573" stop="101571"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="100873" g_stop="101271" g_length="399"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="400" r_length="400" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0246P13.1" gen_strand="+" ref_id="SGN-U344532" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>399</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0246P13.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U344532" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="100873" e_stop="101271"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTACACTGACATACATTGATGAGGATGGTGATGTTGTAACACTTGTTGATGACGATGATCTGCAGGATATCACGAGGCAGGACCTGGATCCCCTGCGAATATCTGTGACATTAAACTCTGAAAAACTTAGTATATCTTCAGGTACATCAAGTGGAAATTCTACTTCCGTCAGGGCCCCACCTACATTTCCGAACATAAATTCGAGTGTTTCGGATCTTCTCAAGTCATTGCCAAAGTCAAAAAGCAAAAAAATCCTAAAGCACTCTGCAGATATGGCGTCTAAAGCCTCATCAGCTGCCCGAGAAATTGCTGAGCTTTCCAAAGCTCTCTCTGTGACTAGCTTATCCTACTTAAAGCAGGCTTGTCCAGTATCGGGA-GTCCCTATGGGTAGTGTTAAA</genome_strand>
        <mrna_strand>CTTACACTGACATACATTGATGAGGATGGTGATGTTGTAACACTTGTTGATGACGATGATCTGCAGGATATCACGAGGCAGGACCTGGATCCCCTGCGAATATCTGTGACATTAAACTCTGAAAAACTTAGTATATCTTCAGGTACATCAAGTGGAAATTCTACTTCCGTCAGGGCCCCACCTACATTTCCGAACATAAATTCGAGTGTTTCGGATCTTCTCAAGTCATTGCCAAAGTCAAAAAGCAAAAAAATCCTAAAGCACTCTGCAGATATGGCGTCTAAAGCCTCATCAGCTGCCCGAGAAATTGCTGAGCTTTCCAAAGCTCTCTCTGTGACTAACTTATCCTACTTAAAGCAGGCTTGTCCAGTATCGGGAGGTCCCTATGGGTAGTGTTAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0246P13-2wghE/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U318606" ref_strand="+" ref_description="SGN-U318606        Tomato 200607 #1 [16 ESTs aligned] arabidopsis/peptide: | Symbol: None | ubiquitin-associated (UBA)/TS-N domain-containing protein / octicosapeptide/Phox/Bemp1 (PB1) domain-containing protein, contains Pfam profiles PF00627: Ubiquitin-associated (UBA)/TS-N domain, PF00569: Zinc finger ZZ type domain, PF00564: PB1 domain | chr4:12741043-12744543 FORWARD | Aliases: F22K18.110, F22K18_110(evalue: 4e-105, score=379) genbank/nr: gi|15233935|ref|NP_194200.1| ubiquitin-associated (UBA)/PB1 domain-containing protein [Arabidopsis thaliana] gi|7452446|pir||T05565 hypothetical protein F22K18.110 - Arabidopsis thaliana gi|4220521|emb|CAA22994.1| putative protein [Arabidopsis thaliana] gi|7269320|emb|CAB79379.1| putative protein [Arabidopsis thaliana] gi|17065502|gb|AAL32905.1| putative protein [Arabidopsis thaliana] gi|22136162|gb|AAM91159.1| putative protein [Arabidopsis thaliana] gi|22655264|gb|AAM98222.1| unknown protein [Arabidopsis thaliana] gi|30725524|gb|AAP37784.1| At4g24690 [Arabidopsis thaliana](evalue: 4e-103, score=379)">
      <seq>tcgggagtccctatgggtagtgttaaaagtggagagccatctcaagcagcgaatcctgaggagctgaccgttaaaactgcaggacgacccaaaagtcatactgtatccataaatgcatcagaattgaaatcctcccaaccagatcaaaacggaattcagtgtgaaccattatcaaaaagtcctaagcgtaactcatctctggtagacggtaagaaggaagagggtaacaaatttggtgattcccatcttgttgggaaggctcttggtaattcagatcctagtgcctcaaccactggcccaaaaaagacagctgataaacagcaaactgagaatcaccctggtgctgagcctgttggtgttgttggtttatctgggaagctttctggtggttttagatccccaatttcatattggatgcctatggtgcccgtgtcaaatgacactatccaacctcaatactctactttccggatcccagttaaaaggagccataatcacagtgatgggactggctctattttccacagaggcgttcgctgtgatggttgtggggttcatccaataactggacctaggttcaaatctaaagtaaaggaggactatgatctctgcagcatatgctttgcacaaatgggaattgatgctgattacgtcagaatggatcgtcctgtttcttaccatcatcccatagctttcaaggctttacatgaacctcatgacatctttcgaggctgcggtgtaaaatcgcctaagctggacagccgcttcaaacatgatgtcaatgtacttgatggtactatgatggctccatcgactccatttaccaaggtctggaggatgaggaacaatggtaatattttctggccacaaggaacacaacttgtttggattgggggagatcgattaggtgatgctgtttctgttgaattacagattccttcgtttggcttggctgtagaccatgaatttgatgtggcagttgattttagagctcctaaccttcctggcaggtacatctccttctggaggatggccttgccttcaggggagaagtttgggcagcgtgtatgggtgcttatccaggttgatttttcaatgatcccgaaaaaggagttctcttatgaagcctctcaggtcctggacttgaatcttcctccagccggctatgatatagctggttctgaatatattaatgtgaatgcagacatgacaatagaggatatcattgctgaccctaaaatttcaaaccctgccactggatcagttgagccggtggttgatggaaaccgtaacaatgaggagttcaagtcgtgcatttctccttctgcagctggttcgtcaatttcataccccattgatttatccgaggcagcaccagaagttacttctgttgcaccaccatctgttgtagaggtgcaagcatctccacaggaagatgtcgagatgtccctcctcaaggaactggatgacatgggtttcactcaggttaacttaaacaaagaagtcttgaggatgaacgagtataacctggaacaatcagtagctgatctttgtggtgtttctgagtgggatcctatccttgaagagctggaggagatgggtttccacaacaaagagattaacaagacgttgctcaagaagaacaatggcagcattaagcgtgttgtgatggatcttattgccggagagaattagaatctagttatcagtatttcttgcaatatattatgctttcagtagattatgctatctataacttgctagactgagtttgatgttttggtgactgtgtcttatgtggttttgcacaattgatagatgcactgtaacttggatgttttgttgactttgtgtccttgtgtggttttgcacaattgatagatgcactgaaacttctttaagcaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0246P13-2wghE/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0246P13.1" temp_strand="+" temp_description="C06HBa0246P13.1  AC232639.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0246P13 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="100945" stop="103917"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="101245" g_stop="101834" g_length="590"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="590" r_length="590" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="101835" i_stop="101911" i_length="77">
            <donor d_prob="0.960" d_score="1.00"/>
            <acceptor a_prob="0.977" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="101912" g_stop="102035" g_length="124"/>
          <reference_exon_boundary r_type="cDNA" r_start="591" r_stop="714" r_length="124" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="102036" i_stop="102119" i_length="84">
            <donor d_prob="0.885" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="102120" g_stop="102338" g_length="219"/>
          <reference_exon_boundary r_type="cDNA" r_start="715" r_stop="933" r_length="219" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="102339" i_stop="102428" i_length="90">
            <donor d_prob="0.939" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="102429" g_stop="102578" g_length="150"/>
          <reference_exon_boundary r_type="cDNA" r_start="934" r_stop="1083" r_length="150" r_score="0.993"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="102579" i_stop="102670" i_length="92">
            <donor d_prob="0.710" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="102671" g_stop="103186" g_length="516"/>
          <reference_exon_boundary r_type="cDNA" r_start="1084" r_stop="1599" r_length="516" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="103187" i_stop="103314" i_length="128">
            <donor d_prob="0.975" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="103315" g_stop="103616" g_length="302"/>
          <reference_exon_boundary r_type="cDNA" r_start="1600" r_stop="1901" r_length="302" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="1904" polyA_stop="1924"/>
      <MATCH_line gen_id="C06HBa0246P13.1" gen_strand="+" ref_id="SGN-U318606" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>1901</cumulative_length_of_scored_exons>
        <coverage percentage="0.988" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0246P13.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U318606" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="101245" e_stop="101834"/>
          <exon e_start="101912" e_stop="102035"/>
          <exon e_start="102120" e_stop="102338"/>
          <exon e_start="102429" e_stop="102578"/>
          <exon e_start="102671" e_stop="103186"/>
          <exon e_start="103315" e_stop="103616"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCGGGAGTCCCTATGGGTAGTGTTAAAAGTGGAGAGCCATCTCAAGCAGCGAATCCTGAGGAGCTGACCGTTAAAACTGCAGGACGACCCAAAAGTCATACTGTATCCATAAATGCATCAGAATTGAAATCCTCCCAACCAGATCAAAACGGAATTCAGTGTGAACCATTATCAAAAAGTCCTAAGCGTAACTCATCTCTGGTAGACGGTAAGAAGGAAGAGGGTAACAAATTTGGTGATTCCCATCTTGTTGGGAAGGCTCTTGGTAATTCAGATCCTAGTGCCTCAACCACTGGCCCAAAAAAGACAGCTGATAAACAGCAAACTGAGAATCACCCTGGTGCTGAGCCTGTTGGTGTTGTTGGTTTATCTGGGAAGCTTTCTGGTGGTTTTAGATCCCCAATTTCATATTGGATGCCTATGGTGCCCGTGTCAAATGACACTATCCAACCTCAATACTCTACTTTCCGGATCCCAGTTAAAAGGAGCCATAATCACAGTGATGGGACTGGCTCTATTTTCCACAGAGGCGTTCGCTGTGATGGTTGTGGGGTTCATCCAATAACTGGACCTAGGTTCAAATCTAAAGTGTAAGAAACGTGAACCTTTTGTATAATTGGTATTTGACTAATCAATGTTAAGGACTGATCCTCATATTCTCATGCAGAAAGGAGGACTATGATCTCTGCAGCATATGCTTTGCACAAATGGGAATTGATGCTGATTACGTCAGAATGGATCGTCCTGTTTCTTACCATCATCCCATAGCTTTCAAGGCTTTACATGAACCTGTATAAGGAGTTAACTTTTTTCTTTCAATTTTCTGCAAGTACTCTCTGTGTTGATAAACTCTTGTCAACTTGTTGTGTATGTAGCATGACATCTTTCGAGGCTGCGGTGTAAAATCGCCTAAGCTGGACAGCCGCTTCAAACATGATGTCAATGTACTTGATGGTACTATGATGGCTCCATCGACTCCATTTACCAAGGTCTGGAGGATGAGGAACAATGGTAATATTTTCTGGCCACAAGGAACACAACTTGTTTGGATTGGGGGAGATCGATTAGGTGATGCTGTTTCTGTTGAATTACAGGTCAGAGTTATGGGCATGTACTTTTTTTTTTTTGCTGAACATCCATGCCTACAGTCCTGTGATGTGATGATACATCGTCCCTATCTGCAGATTCCTTCGTTTGGCTTGGCTGTAGACCATGAATTTGATGTGGCAGTTGATTTTAGAGCTCCTAAGCTTCCTGGCAGGTACATCTCCTTCTGGAGGATGGCCTTGCCTTCAGGGGAGAAGTTTGGGCAGCGTGTATGGGTGCTTATCCAGGTCAGGATTGTTCGCATGCAAAATTATTTCTCGTCTTGATAATAAGAGGTAGCTTCGATGCTGATTTGAATATTTGTAACTCATTTTTTCAGGTTGATTTTTCAATGATCCCGAAAAAGGAGTTCTCTTATGAAGCCTCTCAGGTCCTGGACTTGAATCTTCCTCCAGCCGGCTATGATATAGCTGGTTCTGAATATATTAATGTGAATGCAGACATGACAATAGAGGATATCATTGCTGACCCTAAAATTTCAAACCCTGCCACTGGATCAGTTGAGCCGGTGGTTGATGGAAACCGTAACAATGAGGAGTTCAAGTCGTGCATTTCTCCTTCTGCAGCTGGTTCGTCAATTTCATACCCCATTGATTTATCCGAGGCAGCACCAGAAGTTACTTCTGTTGCACCACCATCTGTTGTAGAGGTGCAAGCATCTCCACAGGAAGATGTCGAGATGTCCCTCCTCAAGGAACTGGATGACATGGGTTTCACTCAGGTTAACTTAAACAAAGAAGTCTTGAGGATGAACGAGTATAACCTGGAACAATCAGTAGCTGATCTTTGTGGTGTTTCTGAGTGGGATCCTATCCTTGAAGAGCTGGAGGAGATGGTAGGTTGTTACTGTTGTGGTCATTAAAATTAGTGTAGTTAGTGTTTGACATTTATACCTTCCTTTTCTGCATGTTGAGCAAAACAATAACTTCTAGCTTTTGACCATTTTATATTTCGTCTCTGCAGGGTTTCCACAACAAAGAGATTAACAAGACGTTGCTCAAGAAGAACAATGGCAGCATTAAGCGTGTTGTGATGGATCTTATTGCCGGAGAGAATTAGAATCTAGTTATCAGTATTTCTTGCAATATATTATGCTTTCAGTAGATTATGCTATCTATAACTTGCTAGACTGAGTTTGATGTTTTGGTGACTGTGTCTTATGTGGTTTTGCACAATTGATAGATGCACTGTAACTTGGATGTTTTGTTGACTTTGTGTCCTTGTGTGGTTTTGCACAATTGATAGATGCACTGAAACTTCTTTAA</genome_strand>
        <mrna_strand>TCGGGAGTCCCTATGGGTAGTGTTAAAAGTGGAGAGCCATCTCAAGCAGCGAATCCTGAGGAGCTGACCGTTAAAACTGCAGGACGACCCAAAAGTCATACTGTATCCATAAATGCATCAGAATTGAAATCCTCCCAACCAGATCAAAACGGAATTCAGTGTGAACCATTATCAAAAAGTCCTAAGCGTAACTCATCTCTGGTAGACGGTAAGAAGGAAGAGGGTAACAAATTTGGTGATTCCCATCTTGTTGGGAAGGCTCTTGGTAATTCAGATCCTAGTGCCTCAACCACTGGCCCAAAAAAGACAGCTGATAAACAGCAAACTGAGAATCACCCTGGTGCTGAGCCTGTTGGTGTTGTTGGTTTATCTGGGAAGCTTTCTGGTGGTTTTAGATCCCCAATTTCATATTGGATGCCTATGGTGCCCGTGTCAAATGACACTATCCAACCTCAATACTCTACTTTCCGGATCCCAGTTAAAAGGAGCCATAATCACAGTGATGGGACTGGCTCTATTTTCCACAGAGGCGTTCGCTGTGATGGTTGTGGGGTTCATCCAATAACTGGACCTAGGTTCAAATCTAAAGT.............................................................................AAAGGAGGACTATGATCTCTGCAGCATATGCTTTGCACAAATGGGAATTGATGCTGATTACGTCAGAATGGATCGTCCTGTTTCTTACCATCATCCCATAGCTTTCAAGGCTTTACATGAACCT....................................................................................CATGACATCTTTCGAGGCTGCGGTGTAAAATCGCCTAAGCTGGACAGCCGCTTCAAACATGATGTCAATGTACTTGATGGTACTATGATGGCTCCATCGACTCCATTTACCAAGGTCTGGAGGATGAGGAACAATGGTAATATTTTCTGGCCACAAGGAACACAACTTGTTTGGATTGGGGGAGATCGATTAGGTGATGCTGTTTCTGTTGAATTACAG..........................................................................................ATTCCTTCGTTTGGCTTGGCTGTAGACCATGAATTTGATGTGGCAGTTGATTTTAGAGCTCCTAACCTTCCTGGCAGGTACATCTCCTTCTGGAGGATGGCCTTGCCTTCAGGGGAGAAGTTTGGGCAGCGTGTATGGGTGCTTATCCAG............................................................................................GTTGATTTTTCAATGATCCCGAAAAAGGAGTTCTCTTATGAAGCCTCTCAGGTCCTGGACTTGAATCTTCCTCCAGCCGGCTATGATATAGCTGGTTCTGAATATATTAATGTGAATGCAGACATGACAATAGAGGATATCATTGCTGACCCTAAAATTTCAAACCCTGCCACTGGATCAGTTGAGCCGGTGGTTGATGGAAACCGTAACAATGAGGAGTTCAAGTCGTGCATTTCTCCTTCTGCAGCTGGTTCGTCAATTTCATACCCCATTGATTTATCCGAGGCAGCACCAGAAGTTACTTCTGTTGCACCACCATCTGTTGTAGAGGTGCAAGCATCTCCACAGGAAGATGTCGAGATGTCCCTCCTCAAGGAACTGGATGACATGGGTTTCACTCAGGTTAACTTAAACAAAGAAGTCTTGAGGATGAACGAGTATAACCTGGAACAATCAGTAGCTGATCTTTGTGGTGTTTCTGAGTGGGATCCTATCCTTGAAGAGCTGGAGGAGATG................................................................................................................................GGTTTCCACAACAAAGAGATTAACAAGACGTTGCTCAAGAAGAACAATGGCAGCATTAAGCGTGTTGTGATGGATCTTATTGCCGGAGAGAATTAGAATCTAGTTATCAGTATTTCTTGCAATATATTATGCTTTCAGTAGATTATGCTATCTATAACTTGCTAGACTGAGTTTGATGTTTTGGTGACTGTGTCTTATGTGGTTTTGCACAATTGATAGATGCACTGTAACTTGGATGTTTTGTTGACTTTGTGTCCTTGTGTGGTTTTGCACAATTGATAGATGCACTGAAACTTCTTTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0246P13-2wghE/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U325020" ref_strand="+" ref_description="SGN-U325020        Tomato 200607 #1 [4 ESTs aligned] arabidopsis/peptide: | Symbol: None | drought-responsive family protein, non-consensus AT donor splice site at exon 3, AC acceptor splice site at exon 4; similar to drought-induced mRNA, Di19 (Arabidopsis thaliana) gi:469110:emb:CAA55321 | chr5:9491369-9493642 FORWARD | Aliases: F2P16.10, F2P16_10(evalue: 5e-12, score=68.2) genbank/nr: gi|57899211|dbj|BAD87360.1| putative drought-induced protein DI [Oryza sativa (japonica cultivar-group)] (evalue: 4e-22, score=107)">
      <seq>aagccattagagcttggttcccttgccctttctgttatggcgaaatagaagtgccaatgctttgcagccatttgcaagaagaacattgttttgacttaaaaaacgcggtctgtcccatatgtgctgcaactctgggcaaagatcctactggacatttttctgtgcaacatgcacactcagtaaagaggagaagaaattacctaaaaccaggcttctggaataatgcaacagctatgatcggaaaggatcctcgagaaatagcttcattttttggcacagattcagtatttggtcgatataaggttcaagaatctgctcctgatccacttttattgccatttctctgcaattttcctccttctgatctgaaatgcaggcagcaagataagtcctctgtttgtgatactgctattcctgaaatagaaagcagcaagctagctgtatctgatccagaactagaagaggattttgaagagaaaaggcagagagctacatttcttcaagagctggttgcttcaactatcttatagaaaatcaaccaacttttgctttcataaattaagcaagagacaatcgttccaaattactagcaaaagtcatgtaacacaagaaagcatctcaaaaacttctaatatctatacatcaatgttacaatttcaagtatattaatgtaatctcatttatccttgacgaccaacatgttactgtttgctaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0246P13-2wghE/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0246P13.1" temp_strand="+" temp_description="C06HBa0246P13.1  AC232639.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0246P13 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="106054" stop="108658"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="106354" g_stop="106460" g_length="107"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="107" r_length="107" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="106461" i_stop="106606" i_length="146">
            <donor d_prob="0.962" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="106607" g_stop="106684" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="108" r_stop="185" r_length="78" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="106685" i_stop="106776" i_length="92">
            <donor d_prob="0.976" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="106777" g_stop="107018" g_length="242"/>
          <reference_exon_boundary r_type="cDNA" r_start="186" r_stop="427" r_length="242" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="107019" i_stop="108071" i_length="1053">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.972" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="108072" g_stop="108354" g_length="283"/>
          <reference_exon_boundary r_type="cDNA" r_start="428" r_stop="710" r_length="283" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="714" polyA_stop="730"/>
      <MATCH_line gen_id="C06HBa0246P13.1" gen_strand="+" ref_id="SGN-U325020" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>710</cumulative_length_of_scored_exons>
        <coverage percentage="0.973" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0246P13.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U325020" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="106354" e_stop="106460"/>
          <exon e_start="106607" e_stop="106684"/>
          <exon e_start="106777" e_stop="107018"/>
          <exon e_start="108072" e_stop="108354"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGCCATTAGAGCTTGGTTCCCTTGCCCTTTCTGTTATGGCGAAATAGAAGTGCCAATGCTTTGCAGCCATTTGCAAGAAGAACATTGTTTTGACTTAAAAAACGCGGTAATTTCCCACTCATGATGCTTCCTTATATCACATTCTTATATGCAAAAAATGACTACAGTAACATACTGGAAACTTTTCAATCTTTGTATTTGTACTGAAGAAATTGTATGAGTTGATCAATCTACTCGACGTTTCTATTACAGGTCTGTCCCATATGTGCTGCAACTCTGGGCAAAGATCCTACTGGACATTTTTCTGTGCAACATGCACACTCAGTAAAGGTAGACATATCCGCGTCAAAAATATTAATTTTGAGTATATAGGATGATTTATAAGTGATCAGCTGAACCTCACACGCCTACTCCTTTTACAGAGGAGAAGAAATTACCTAAAACCAGGCTTCTGGAATAATGCAACAGCTATGATCGGAAAGGATCCTCGAGAAATAGCTTCATTTTTTGGCACAGATTCAGTATTTGGTCGATATAAGGTTCAAGAATCTGCTCCTGATCCACTTTTATTGCCATTTCTCTGCAATTTTCCTCCTTCTGATCTGAAATGCAGGCAGCAAGATAAGTCCTCTGTTTGTGATACTGCTATTCCTGAAATAGAAAGGTAAGTTTATTCATTCGTTCTCTTTGTTTTCGTGAAATTTTCTGATAAAACAAACTGAACTAAATACTAAACCTGACAGTTAAGCATCAGTGTTTAAGTTTGTACCTTTCTGTATTTGTCCTTCCGTTGCCAATATAACCAGCAAAAAGTGTCCACCTAGAGTGTAGTTTCACCAATTCCCAACCCAAAACCTACCCACGTTTAGAGGCAGATTCAGGATTTAGAGTTATAGATTCAATCTTCAATATTGTTAAACTTACTGTTCTATTAAAATTATGAGTTCAGATGAAGCCATAGCCAAGAGGCTACATCCGCCTATCCTATTTAGAGTTTATTCCTCAACACTTTATGTGGTGTATGTATTACTTTCAGTAATCGGTTATCTAAAGAACTCGAGCTTCTAGACATGTCTTGAAGTTCTTGACGGAACTGGTGCAATACGAGCTGTTACCATACTGAACATGTGGTAAAGCTGTAGATATGATAAACTGACTAAGACGTTACAATGTGTTACTACGCTGAAGGAATGATATTTATCATAGATCATATAGATAAACTGTCTAAGAGTTCGATATTTTTCATCAGCACATACCAGGAATGAGTCTATTGTTGCAGCAATGGACGACCTAGGAGTTGGTCATGAAACTCGATGTTTATTACAGAACACAATTCTGCTTCAAAAATTTCAATATGATAACAATATTAGGTGTCTTAACAGACCTGATAACCTCCAGTTTGTTGAGTTTGAAATGTTTAGCTGATCCTTGTAGAGGAACTTTTAGTTCATGGGTTGAAACACGATCTGTTTCGTTCAGTAGGTTATGTATAGATTGTTCATACATTTTAAATAAATGTATGCGCCAAAACTATTGGGTTGTACCAAACTTGTAAGTCTATAATGGTGGCTCCTAATAAGCATTGATTGGTAAACTAGAATACATGACAAGTGACCTGCTATAATAGGTTAGAATTATATGTATAACAATTTATATACTGTCAGTATATACCGAATCGGCGTAGGATGACAGAAATCTACTGTTGTCTCTTGTGCAGCAGCAAGCTAGCTGTATCTGATCCAGAACTAGAAGAGGATTTTGAAGAGAAAAGGCAGAGAGCTACATTTCTTCAAGAGCTGGTTGCTTCAACTATCTTATAGAAAATCAACCAACTTTTGCTTTCATAAATTAAGCAAGAGACAATCGTTCCAAATTACTAGCAAAAGTCATGTAACACAAGAAAGCATCTCAAAAACTTCTAATATCTATACATCAATGTTACAATTTCAAGTATATTAATGTAATCTCATTTATCCTTGACGACCAACATGTTACTGTTT</genome_strand>
        <mrna_strand>AAGCCATTAGAGCTTGGTTCCCTTGCCCTTTCTGTTATGGCGAAATAGAAGTGCCAATGCTTTGCAGCCATTTGCAAGAAGAACATTGTTTTGACTTAAAAAACGCG..................................................................................................................................................GTCTGTCCCATATGTGCTGCAACTCTGGGCAAAGATCCTACTGGACATTTTTCTGTGCAACATGCACACTCAGTAAAG............................................................................................AGGAGAAGAAATTACCTAAAACCAGGCTTCTGGAATAATGCAACAGCTATGATCGGAAAGGATCCTCGAGAAATAGCTTCATTTTTTGGCACAGATTCAGTATTTGGTCGATATAAGGTTCAAGAATCTGCTCCTGATCCACTTTTATTGCCATTTCTCTGCAATTTTCCTCCTTCTGATCTGAAATGCAGGCAGCAAGATAAGTCCTCTGTTTGTGATACTGCTATTCCTGAAATAGAAAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAAGCTAGCTGTATCTGATCCAGAACTAGAAGAGGATTTTGAAGAGAAAAGGCAGAGAGCTACATTTCTTCAAGAGCTGGTTGCTTCAACTATCTTATAGAAAATCAACCAACTTTTGCTTTCATAAATTAAGCAAGAGACAATCGTTCCAAATTACTAGCAAAAGTCATGTAACACAAGAAAGCATCTCAAAAACTTCTAATATCTATACATCAATGTTACAATTTCAAGTATATTAATGTAATCTCATTTATCCTTGACGACCAACATGTTACTGTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0246P13-2wghE/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U338134" ref_strand="-" ref_description="SGN-U338134        Tomato 200607 #1 [1 ESTs aligned]">
      <seq>tattgcaccagttccgtcaagaacttcaagacatgtctagaagctcgagttctttagataaccgattactgaaagtaatacatacaccacataaagtgttgaggaataaactctaaataggataggcggatgtagcctcttggctatggcttcatctgaactcataattttaatagaacagtaagtttaacaatattgaagattgaatctataactctaaatcctgaatctgcctctaaacgtgggtaggttttgggttgggaattggtgaaactacactctaggtggacactttttgctggttatattggcaacggaaggacaaatacagaaaggaatagcagtatcacaaacagaggacttatcttgctgcctgcatttcagatcagaaggaggaaaattgcagagaaatggcaataaaagtggatcaggagcagattcttgaaccttatatcgaccaaatactgaatctgtgccaaaaaatgaagctatttctcgaggatcctttccgatcatagctgttgcattattccagaagcctggttttaggtaatttcttctcctctgtaaaaggagtaggcgtgtgaggttcagctgatcacttataaatcatcctatatactcaaaattaatatttttgacgcggatatgtctacctttactgagtgtgcatgttgcacagaaaaatgtccagtaggatctttgcccagaggagcagcacatatggga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0246P13-2wghE/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0246P13.1" temp_strand="-" temp_description="C06HBa0246P13.1  AC232639.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0246P13 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="107758" stop="106312"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="107458" g_stop="107124" g_length="335"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="335" r_length="335" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="107123" i_stop="107006" i_length="118">
            <donor d_prob="0.962" d_score="1.00"/>
            <acceptor a_prob="0.890" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="107005" g_stop="106612" g_length="394"/>
          <reference_exon_boundary r_type="cDNA" r_start="336" r_stop="729" r_length="394" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0246P13.1" gen_strand="-" ref_id="SGN-U338134" ref_strand="-">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>729</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0246P13.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U338134" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="107458" e_stop="107124"/>
          <exon e_start="107005" e_stop="106612"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATTGCACCAGTTCCGTCAAGAACTTCAAGACATGTCTAGAAGCTCGAGTTCTTTAGATAACCGATTACTGAAAGTAATACATACACCACATAAAGTGTTGAGGAATAAACTCTAAATAGGATAGGCGGATGTAGCCTCTTGGCTATGGCTTCATCTGAACTCATAATTTTAATAGAACAGTAAGTTTAACAATATTGAAGATTGAATCTATAACTCTAAATCCTGAATCTGCCTCTAAACGTGGGTAGGTTTTGGGTTGGGAATTGGTGAAACTACACTCTAGGTGGACACTTTTTGCTGGTTATATTGGCAACGGAAGGACAAATACAGAAAGGTACAAACTTAAACACTGATGCTTAACTGTCAGGTTTAGTATTTAGTTCAGTTTGTTTTATCAGAAAATTTCACGAAAACAAAGAGAACGAATGAATAAACTTACCTTTCTATTTCAGGAATAGCAGTATCACAAACAGAGGACTTATCTTGCTGCCTGCATTTCAGATCAGAAGGAGGAAAATTGCAGAGAAATGGCAATAAAAGTGGATCAGGAGCAGATTCTTGAACCTTATATCGACCAAATACTGAATCTGTGCCAAAAAATGAAGCTATTTCTCGAGGATCCTTTCCGATCATAGCTGTTGCATTATTCCAGAAGCCTGGTTTTAGGTAATTTCTTCTCCTCTGTAAAAGGAGTAGGCGTGTGAGGTTCAGCTGATCACTTATAAATCATCCTATATACTCAAAATTAATATTTTTGACGCGGATATGTCTACCTTTACTGAGTGTGCATGTTGCACAGAAAAATGTCCAGTAGGATCTTTGCCCAGAGTTGCAGCACATATGGGA</genome_strand>
        <mrna_strand>TATTGCACCAGTTCCGTCAAGAACTTCAAGACATGTCTAGAAGCTCGAGTTCTTTAGATAACCGATTACTGAAAGTAATACATACACCACATAAAGTGTTGAGGAATAAACTCTAAATAGGATAGGCGGATGTAGCCTCTTGGCTATGGCTTCATCTGAACTCATAATTTTAATAGAACAGTAAGTTTAACAATATTGAAGATTGAATCTATAACTCTAAATCCTGAATCTGCCTCTAAACGTGGGTAGGTTTTGGGTTGGGAATTGGTGAAACTACACTCTAGGTGGACACTTTTTGCTGGTTATATTGGCAACGGAAGGACAAATACAGAAAG......................................................................................................................GAATAGCAGTATCACAAACAGAGGACTTATCTTGCTGCCTGCATTTCAGATCAGAAGGAGGAAAATTGCAGAGAAATGGCAATAAAAGTGGATCAGGAGCAGATTCTTGAACCTTATATCGACCAAATACTGAATCTGTGCCAAAAAATGAAGCTATTTCTCGAGGATCCTTTCCGATCATAGCTGTTGCATTATTCCAGAAGCCTGGTTTTAGGTAATTTCTTCTCCTCTGTAAAAGGAGTAGGCGTGTGAGGTTCAGCTGATCACTTATAAATCATCCTATATACTCAAAATTAATATTTTTGACGCGGATATGTCTACCTTTACTGAGTGTGCATGTTGCACAGAAAAATGTCCAGTAGGATCTTTGCCCAGAGGAGCAGCACATATGGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0246P13-2wghE/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U312391" ref_strand="+" ref_description="SGN-U312391        Tomato 200607 #1 [50 ESTs aligned] arabidopsis/peptide: | Symbol: None | elongation factor Tu / EF-Tu (TUFA), identical to SWISS-PROT:P17745 elongation factor Tu, chloroplast precursor (EF-Tu) (Arabidopsis thaliana) | chr4:10989963-10991720 FORWARD | Aliases: F9F13.10, F9F13_10(evalue: 0, score=679) genbank/nr: Elongation(evalue: 0, score=739)">
      <seq>ggctctctttctccctaccaagaggaaagatgactttattatcctctcttccttctaccacaattcatttcactctctttctccaaaatcttcaatcctcagcaaaagcttcttccatggcttcaatttcagcagcttctgcaactgctgctgctgctgcttctacaaagattaataccagtggtactgttcttccttcaaaatcctctaagcttatcctttcatcttcttttacaccaaacccatcaacccttttcctccattcacccgccactactgcaccttcttcttcttcctcccgccaccgccggtttactgtccgagctgcgcgtggtaaattcgaaaggaagaaaccccatgtcaatattggtacaattggccatgttgaccatgggaaaaccacacttacagctgctttgacaatggcgcttgcttctctgggtaactccgccccgaagaagtatgatgaaattgatgctgcccctgaagaaagggctcgtggtattacgattaatactgccacagtggagtatgaaactgaaaatcggcattacgctcatgtggattgccctggtcacgctgattatgtgaagaatatgattactggtgctgctcaaatggatggagctatacttgttgtttcaggagctgatggtccaatgccgcagactaaggaacatattttgcttgctaagcaagtgggtgtccctaatatggttgttttcttgaacaaagaggaccaagttgatgatgaagagttgcttgagcttgttgagctggaggtaagagagttattgtcaagttatgagtttcctggtgatgatattcctattcattgtgggtctgcccttttggctttagaggctttaatggctaatcctactattaaaaggggtgatgatcaatgggttgataagatttataaattgatggactctgttgatgaatatattcctattccacaaagacaaactgaattacctttcttgatggctattgaagatgtgttttctattactggtagaggtacagtggctacagggagagtggaaagagggactgttaagacaggggaaattgttgatatagttggattgaaggacactaggaacactacagtaacaggagttgagatgtttcagaagatattggatgaagcaatggcaggagataatgtggggttgttgttgagaggtattcaaaagatcgatattcaaagaggaatggtgttggcaaaacctggatcaattactccacacaccaagtttgaagctttggtgtatgtgttgaagaaggaagagggtggcaggcattcccctttctttgctggttataggccacagttttacatgagaacaactgatgtgaccggaaaggttactgctattatgactgacaagggagaagaatctaagatggtcatgcctggtgatcgcgtaaacatggtggtcgagctcattatgccagtggcttgtgagcagggtatgaggttcgctattagggaaggaggaaagactgtcggagctggtgttattcagaaaatcttagaatgatgaacttgcagctgagcatcccttttcacatatggtcggatttttccattgaagtttattaatccattgtcatatatgcgactttttggttacttttgttatgtcttagaatcttactttagttgaagtatcctgttttatcgcccaattctactgaacttttgataatttttcccgtctcttgtttcacttatcatttgcttgaaagaaatgatatcatttgctctcatgaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0246P13-2wghE/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0246P13.1" temp_strand="-" temp_description="C06HBa0246P13.1  AC232639.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0246P13 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="112312" stop="109929"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="112012" g_stop="110232" g_length="1781"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="1783" r_length="1783" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="1785" polyA_stop="1805"/>
      <MATCH_line gen_id="C06HBa0246P13.1" gen_strand="-" ref_id="SGN-U312391" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>1781</cumulative_length_of_scored_exons>
        <coverage percentage="0.987" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0246P13.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U312391" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="112012" e_stop="110232"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGCTCTCTTTCTCCCTACCAA-A-AAAAGATAACTTCATTATCCTCTCTTCCTTCTACCACAATTCATTTCACTCTCTTTCTCCAAAATCTTCAATCCTCAGCAAAAGCTTCTTCCATGGCTTCAATTTCAGCAGCTTCTGCAACTGCTGCTGCTGCTGCTTCTACAAAGATTAATACCAGTGGTACTGTTCTTCCTTCAAAATCCTCTAAGCTTATCCTTTCATCTTCTTTTACACCAAACCCATCAACCCTTTTCCTCCATTCACCCGCCACTACTGCACCTTCTTCTTCTTCCTCCCGCCACCGCCGGTTTACTGTCCGAGCTGCGCGTGGTAAATTCGAAAGGAAGAAACCCCATGTCAATATTGGTACAATTGGCCATGTTGACCATGGGAAAACCACACTTACAGCTGCTTTGACAATGGCGCTTGCTTCTCTGGGTAACTCCGCCCCGAAGAAGTATGATGAAATTGATGCTGCCCCTGAAGAAAGGGCTCGTGGTATTACGATTAATACTGCCACAGTGGAGTATGAAACTGAAAATCGGCATTACGCTCATGTGGATTGCCCTGGTCACGCTGATTATGTGAAGAATATGATTACTGGTGCTGCTCAAATGGATGGAGCTATACTTGTTGTTTCAGGAGCTGATGGTCCAATGCCGCAGACTAAGGAACATATTTTGCTTGCTAAGCAAGTGGGTGTCCCTAATATGGTTGTTTTCTTGAACAAAGAGGACCAAGTTGATGATGAAGAGTTGCTTGAGCTTGTTGAGCTGGAGGTAAGAGAGTTATTGTCAAGTTATGAGTTTCCTGGTGATGATATTCCTATTCATTGTGGGTCTGCCCTTTTGGCTTTAGAGGCTTTAATGGCTAATCCTACTATTAAAAGGGGTGATGATCAATGGGTTGATAAGATTTATAAATTGATGGACTCTGTTGATGAATATATTCCTATTCCACAAAGACAAACTGAATTACCTTTCTTGATGGCTATTGAAGATGTGTTTTCTATTACTGGTAGAGGTACAGTGGCTACAGGGAGAGTGGAAAGAGGGACTGTTAAGACAGGGGAAATTGTTGATATAGTTGGATTGAAGGACACTAGGAACACTACAGTAACAGGAGTTGAGATGTTTCAGAAGATATTGGATGAAGCAATGGCAGGAGATAATGTGGGGTTGTTGTTGAGAGGTATTCAAAAGATCGATATTCAAAGAGGAATGGTGTTGGCAAAACCTGGATCAATTACTCCACACACCAAGTTTGAAGCTTTGGTGTATGTGTTGAAGAAGGAAGAGGGTGGCAGGCATTCCCCTTTCTTTGCTGGTTATAGGCCACAGTTTTACATGAGAACAACTGATGTGACCGGAAAGGTTACTGCTATTATGACTGACAAGGGAGAAGAATCTAAGATGGTCATGCCTGGTGATCGCGTAAACATGGTGGTCGAGCTCATTATGCCAGTGGCTTGTGAGCAGGGTATGAGGTTCGCTATTAGGGAAGGAGGAAAGACTGTCGGAGCTGGTGTTATTCAGAAAATCTTAGAATGATGAACTTGCAGCTGAGCATCCCTTTTCACATATGGTCGGATTTTTCCATTGAAGTTTATTAATCCATTGTCATATATGCGACTTTTTGGTTACTTTTGTTATGTCTTAGAATCTTACTTTAGTTGAAGTATCCTGTTTTATCGCCCAATTCTACTGAACTTTTGATAATTTTTCCCGTCTCTTGTTTCACTTATCATTTGCTTGAAAGAAATGATATCATTTGCTCTCAT</genome_strand>
        <mrna_strand>GGCTCTCTTTCTCCCTACCAAGAGGAAAGATGACTTTATTATCCTCTCTTCCTTCTACCACAATTCATTTCACTCTCTTTCTCCAAAATCTTCAATCCTCAGCAAAAGCTTCTTCCATGGCTTCAATTTCAGCAGCTTCTGCAACTGCTGCTGCTGCTGCTTCTACAAAGATTAATACCAGTGGTACTGTTCTTCCTTCAAAATCCTCTAAGCTTATCCTTTCATCTTCTTTTACACCAAACCCATCAACCCTTTTCCTCCATTCACCCGCCACTACTGCACCTTCTTCTTCTTCCTCCCGCCACCGCCGGTTTACTGTCCGAGCTGCGCGTGGTAAATTCGAAAGGAAGAAACCCCATGTCAATATTGGTACAATTGGCCATGTTGACCATGGGAAAACCACACTTACAGCTGCTTTGACAATGGCGCTTGCTTCTCTGGGTAACTCCGCCCCGAAGAAGTATGATGAAATTGATGCTGCCCCTGAAGAAAGGGCTCGTGGTATTACGATTAATACTGCCACAGTGGAGTATGAAACTGAAAATCGGCATTACGCTCATGTGGATTGCCCTGGTCACGCTGATTATGTGAAGAATATGATTACTGGTGCTGCTCAAATGGATGGAGCTATACTTGTTGTTTCAGGAGCTGATGGTCCAATGCCGCAGACTAAGGAACATATTTTGCTTGCTAAGCAAGTGGGTGTCCCTAATATGGTTGTTTTCTTGAACAAAGAGGACCAAGTTGATGATGAAGAGTTGCTTGAGCTTGTTGAGCTGGAGGTAAGAGAGTTATTGTCAAGTTATGAGTTTCCTGGTGATGATATTCCTATTCATTGTGGGTCTGCCCTTTTGGCTTTAGAGGCTTTAATGGCTAATCCTACTATTAAAAGGGGTGATGATCAATGGGTTGATAAGATTTATAAATTGATGGACTCTGTTGATGAATATATTCCTATTCCACAAAGACAAACTGAATTACCTTTCTTGATGGCTATTGAAGATGTGTTTTCTATTACTGGTAGAGGTACAGTGGCTACAGGGAGAGTGGAAAGAGGGACTGTTAAGACAGGGGAAATTGTTGATATAGTTGGATTGAAGGACACTAGGAACACTACAGTAACAGGAGTTGAGATGTTTCAGAAGATATTGGATGAAGCAATGGCAGGAGATAATGTGGGGTTGTTGTTGAGAGGTATTCAAAAGATCGATATTCAAAGAGGAATGGTGTTGGCAAAACCTGGATCAATTACTCCACACACCAAGTTTGAAGCTTTGGTGTATGTGTTGAAGAAGGAAGAGGGTGGCAGGCATTCCCCTTTCTTTGCTGGTTATAGGCCACAGTTTTACATGAGAACAACTGATGTGACCGGAAAGGTTACTGCTATTATGACTGACAAGGGAGAAGAATCTAAGATGGTCATGCCTGGTGATCGCGTAAACATGGTGGTCGAGCTCATTATGCCAGTGGCTTGTGAGCAGGGTATGAGGTTCGCTATTAGGGAAGGAGGAAAGACTGTCGGAGCTGGTGTTATTCAGAAAATCTTAGAATGATGAACTTGCAGCTGAGCATCCCTTTTCACATATGGTCGGATTTTTCCATTGAAGTTTATTAATCCATTGTCATATATGCGACTTTTTGGTTACTTTTGTTATGTCTTAGAATCTTACTTTAGTTGAAGTATCCTGTTTTATCGCCCAATTCTACTGAACTTTTGATAATTTTTCCCGTCTCTTGTTTCACTTATCATTTGCTTGAAAGAAATGATATCATTTGCTCTCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0246P13-2wghE/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U325401" ref_strand="+" ref_description="SGN-U325401        Tomato 200607 #1 [5 ESTs aligned] arabidopsis/peptide: AT3G48260.1 | Symbol: None | protein kinase family protein, contains protein kinase domain, Pfam:PF00069 | chr3:17883997-17886205 REVERSE | Aliases: None (evalue: 6e-55, score=183) genbank/nr: gi|28874836|emb|CAC84087.1| ZIK1 protein [Medicago sativa](evalue: 1e-77, score=265)">
      <seq>cctgctggagctcgtgacatttgaatatccttatattgagtgttccaacgctgctcaaatatataagaaagtgacagcagtattaagaaacatgatttctatccctgatggaatgcattccagttgatcaattaaaattcaaaatatcagggaatcaagcctgcctcattggcaaaagtgaaggatccaagagtcaaagcctttatagaaaaatgtattgcaaaagcttctgagcggttgcctgctaagaaactattggttgatccctttctcctttctgatgaggattctggaaacgtaggtcgatctttgagcatcaattccagacatgcagatatgagtgatgatcagtctgatagtgaaaggagtacaaaggacccattgcctgaaggaagcagagatttcacagtgcagggccaaaggaaggacctaaatacaatatttcttaaacttcgaattactgattcaacaggtcatattagaaacattcacttcccctttgatattgaagttgatacggcgaatgctgttgctagtgaaatggttgcagagctggacctgacagatcaggatgtttcagcaatagcagaaatgatcgattcagaaattcggtcatatatcccagattgggcaccaagagaaaactctagcaatcacatcaccaatgaagttgcttctgataactttacttctggagtcggagatgatgctcctccctttacaattgatcctgcttattcgggtagtcttgtgttggaaagacttccttcaggtcgaaagtactggtctgtttcaccgaaaacaaccagtaatggcagctctccacgcagacaggggccttcatacacgtcgctgaccgattcaccaactcatgaagacagttggacggaagaatttgaagaatcacctgttatcctgagagagggagggagttcacatgttgctgccttactcggacacgaagattataaatctgagactcacgtggatgatgatgccagtgttcaccgtgattttgactttggtgacaatgctcattctgcggattttagttatgcaagcaggcctcattcatcagaggaaagaaataacatgatcagcaacaactactcagctgatatcagacaaatcaccaaggaactggagaaactgcgcggattgcagcaaaaggagctaaatgatctgaagaagaaacatgactccgctatctcagatcttctaagcaagcttcctcctgagatccgtggcatttatggtcacaaagtatcttccgataatttgcattgctgatgtcctgaaaactcaagttcctctgtaaagatgtaagttgctgttttgtcttttgctactcaactgttgagccattctttgattgtcccaatgacctgactgtccctgaaaagtcccagagttgtcccggtatgccgaaattattcgctgttgctgacaattttcacatccaaaattcaaaagttcgaggggataatcatggaccgtatgtttagatacagattcatttctatcaagtttaaaatcagttcagggtcaggaattgaggtaaatctgaaagaggagacagaggaagcgatgcttctgagattgttggcgactccatttgctatgttagttattcgcatttgcttgcttgcacgcttatgtataatgcgtcttgcaagtcatgttgcagcttaaaacaggaccttcaatttcattgaattgtatacttgtacatatttacctgagtacttagctattcgaaatgtcacttggttgaaaatatgcaggtttttttttataaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0246P13-2wghE/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0246P13.1" temp_strand="-" temp_description="C06HBa0246P13.1  AC232639.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0246P13 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="119955" stop="112264"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="119655" g_stop="119577" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="79" r_length="79" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="119576" i_stop="116142" i_length="3435">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.968" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="116141" g_stop="116071" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="80" r_stop="150" r_length="71" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="116070" i_stop="114359" i_length="1712">
            <donor d_prob="0.981" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="114358" g_stop="114175" g_length="184"/>
          <reference_exon_boundary r_type="cDNA" r_start="151" r_stop="334" r_length="184" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="114174" i_stop="114111" i_length="64">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="114110" g_stop="113973" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="335" r_stop="472" r_length="138" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="113972" i_stop="113890" i_length="83">
            <donor d_prob="0.911" d_score="1.00"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="113889" g_stop="112578" g_length="1312"/>
          <reference_exon_boundary r_type="cDNA" r_start="473" r_stop="1784" r_length="1312" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="1795" polyA_stop="1817"/>
      <MATCH_line gen_id="C06HBa0246P13.1" gen_strand="-" ref_id="SGN-U325401" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>1784</cumulative_length_of_scored_exons>
        <coverage percentage="0.982" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0246P13.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U325401" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="119655" e_stop="119577"/>
          <exon e_start="116141" e_stop="116071"/>
          <exon e_start="114358" e_stop="114175"/>
          <exon e_start="114110" e_stop="113973"/>
          <exon e_start="113889" e_stop="112578"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCTGCTGGAGCTCGTGACATTTGAATATCCTTATATTGAGTGTTCCAACGCTGCTCAAATATATAAGAAAGTGACAGCAGTAAGAATTTATGTCTCTCTTCATGCTCTACATATCAAGTTATTGTATGTTCACGATTGTTGATAGAGTCATAGAGATACATTTCTTGGGATCAAGGTTGTGCAGCAGCACGAGTGATGGAAAATCTTTTTATTGAGAGTGCAACTCTTGGTTAAAAATTGTAAATATCCTTGCATTGCATAGCTTAGGCTTCAAGCCTTCAACCCTCGAGGAACTATGACATTTATGGTTTTACATGACTGTTCATTAACTAAGCTTTAGGTAATTCCATAATTTTCCATTGGTATCTTCATGTGCAAAGAGTGTCATACAAATTGGGATCACAAAGAAATATAAAAATTGTAAGCATTTTAGAGAAATAAAAGCCAATAAGTTTTAAGTTTATTTCCGTATCTAATAGAAGAATACTGCTCCATTTCTATTTCAATAATTATACTCAAACACTGATAACTTAAATGATAGTTAAATTATGTGACTTTAGTTAATAAGCATCTAGGTTTTAGTTTAAATAATTAGCTCCCTAGTCATATACTTGAATTTTTTCCATGTAGGATTCATGTAGTCTAGTTTAAGGCTTGTATGCAGCAAAACGGGTTATCTTGCTTTGGAGGATGTTCTCTACTGGGATTGTTGACTTATGTCTCTCTCCTTTTCCCTATTAATGAGGAGGATGGAATCTCATCCTTCAGTTTGTATTCTCAGGGTGCACCACCCTCATAATAAATTTGATAAAATAACAACTATAGGTGATGTTGCATTTGCATTTCGACATTTTAATGCACTTAAGCTGGTTATCAGAACAAATACAAAAAGTCAGTTTTTTGTAATTTGTTGGGGTTTTATGTTAGTATCAAGTTCATCGGCCTGCTTAAAGTGACAAAACTTCAAGCTTAAGGCATTTCTTAGGGACCAACTGTGCTGCAGTTCGAAGCTGTTTCTACACTGGAAACTGTATGAAGCATTTTCCTCTTTATTTCACCAACCTCTTTGTATAAGGAGAGTGTTAAATTAGTACTAGAAAGGTACCTGATAAGCTTATAAAAGAGAGGCCTTGGATAGAAGCTACAGAAAGAGAGAATCTATTTTTTAATTTATTTTTTAAAATGGTAATGTTGTATTCTTCAGCATTAAGGATATGCCGGTGACCTGCAAACAGAGGGGAATAAAAGAATAGAAGGAAAAAAAAATACTACAAGGATCCTAATAATTCTACAATCTGTTCTGTTTCCTCTAAACCTTCCTCTTTACACCAAAAATAAAAGGATGCAATACAATCCCATCTAACCTTCTGAATGGAATTGGACCTATCTTCAAAGTTTCTTCTATTTCTTTCTTTCCGTACTGTCTACCAAATGCAATGTGGAATTATCCTCCACCATGCCTTTTGGCTCTTGCTGCCCCCTCTTCTTATCCAACAACTCAACAAGTCTGTTGTATGCTCGGGCATTCACAAAGAGAGAATCTATGAAGTCCAGAAAATCATAAATTCTGATTAAGCATCTCCTTTGAGGCAACAAAACAAATTCTGAAGACATCTAAACTTTAAAACAGCAATCAACTCCTTGCTTCCATCAAAGCATCTGCTCTTCCTCTCAAGCCATATTGTCCAGCTAATTCATAATGGAATTATTTGCCATGTCTTCAGCATTCTCTTTCTCTTCATTCTCTAACCTTGCCAGCACACAAGTAGATCCTTAATTCTTTGTGGTATCACCCATTGAACAACAAAAATATTCAGAAAAAGGACCATATTAACTGTGTCTTTGCAATGAATCAGAAGATGATTTTACTGTTTCAGTAGCATTTTGACAGAGGAAATATCTGTTTCACAAGCTTAAGACTTTTTTTTTGTAGGTTGTCCTGAGTCAAACAGGCACCATAAGCAGTAATCCACTAAAAACAAGCAACTTCGGTTGGGGCATTTATTTTCTGCAATGACTTCCATGGACAAAATCCACAGATTTTAACAGCACTTTATAGCAAGAGTTCACAGTAAACCACTAAGGTTTCCCCCTTCTGTTATCTTTATTTCGCCGACCTAAATTTACTGTTAGAAAAAGGAAAAGGAATACTCCATTTGTACCGTACTGATTCTGCTCGTTTCTTTATGAGAAAAAAGTAAAGCTATTTAGTTAACAAAGCACCCTGGAGGTGCATAGTTACAAAAGTTATTTACAAAAGGCTGTATTTCCTTAACTTGATAGGGAACTGCTGAAGTTTATCAACTGGTAGGTATACTCTAATACTTCAAGTTTGGACCAAACAAATAAAAGAAATAAGCAATTTATTTTCAGCTGCTGCAGGGAGCTTTTTTCTTCTTCAACTCATCTCTTGTTTCTTTCATTCCATAACACCCAAAATATAGTTAAAGGAATCGAGTTCCATATCTTTCTGGTAGTTTTTTGTGCCTTCCAATCCCTCCAGATGCAAAACACTTGTATAATATCCCCTGGAAACACCCATTTAATGTTGCTTTTATGTAAGAATTAACTCCATCCAGGCTACTGAACAGTGCATGAAAGAGTGGTTTACTGACTCCAAGACCTTTTCACACACAGGTAGATTCTGTTAGAGATACAATACGTTATCTTGTGTGAGGCAAGCTCCATCAGTGCTATCCTGTTAAAACAGTGCACTCTGGAGGGGTATTAGTTTTGCATAGCCTGAAATCTGATTTCCACACCCGCTTTTTCTATTTTGCACTGTCAAAGATAAACGTACTTTCGCTCGGAGTTTTCTATATTCGTTTTTCTTGAGTTTTTCAGCATAAAATAGATATTGCAAGGGTAGGGCCCATTCAGGAGTTCTTAAGACCGAATTCTGTGTCCTCTCTCTCTCTATCCTTGAGTATAAAAGTAAGTTTAGTCCCAATACCTTTTCCTTTATCAATAAGGGTGTTCGGCCTCACTTCAATAGATGTTCAATTTGCTAAGGAAGTGAACAATAACATGATATTCCAAGAAACAAACATTAGTAGTCCTAAGAAATCAACATTGTTTACGACTTCTGTTGAATGAGTGTCCTTGACTTGGTGGAATCAGTAGCTCATGATGGTTTACCATAGAATGAGATGTTGTTGACCATTTTAAAAACAGTGTGACCATGCATGAACCAAGTGCTGATTGTAGGGACTTAGGCTTTATTTTCTTAGTCTTGTATCCTTTGTTCTATGGTCCTTAACTTTTTTATCCAAGTGAGCCTACTGAATTATTGGATTCACAGTTCATTTCATATGATGTTGTCAAGCTCTTTATCATAAAACTAAAAAGGGTCCTGTGAACTTATGCATTCCTTGAGTAACTACTTTACATCCAATTGCCTGCAGTTTGTCGTGTTTGTTTTCATTGGTCATTCAATTGTTCTAGCAAACTACCCAAAAGATATTGTCCTTACCTGCTTGCATAATTGGACGTGTTCATTGTCATTGTATTATAGGTATTAAGAAACATGATTTCTATCCCTGATGGAATGCATTCCAGTTGATCAATTAAAATTCAAAATATCAGGTAAATGCCTAATACCATCTTGGTTTATTTGTCAAGAGTGCTTTGTCAACGTTGAGTAAGAACCACAGGAGGCAATTTTCATAGGATTTCCAATCATCAGTTTACTTCCATGTACCATCCTCACCTTGGGGAGTTTGTGTCTGAATGTGAATCTTTCTTCTTCTTTTTTTCTTTTCTGTTTTGCATTGCTTCAGTTAGCAGCATCAACCACTTCATTTAGACCTTACTCCAACTGAAATAATTTTTTGTACACACATTCTCTCTCTCTCTCCCTCCCTCTCCAATAAGTTAATCCTTCTTATTCTCTTATAAGTGCTAATTCAGACTGTAGCTAATCCAGACTTCTGTTTCGAACAATGTGGTATGTATCTTGATGTATTTCTAAGGTGTTATATTTTTAGGTTAGTTTAGTTAAGATGAACAAGATAACTGAGTCCAATCTTCTGTGGACTTGCTCTCTTGGGTACATGGTTCCTATTGTTCATTTATCGGGATCATGTGACATTGACAAGAAATATATATGAAATGACTCATAGCTAAAGTGGAAGGAGTACGGCTGATCAAATGAGGGCTTAATTGTTTGGCGTGCAGTTAACTTAAACCATGCTAATGATGTGGTCAAGCGAACCACTGCGGAGAAGCCTAGCATCTCTTTAGGTTTTAGCAGAATTGACAACTTAAACTGAAGGATACTTTTCTTGATCAGTTGTTCGAACGACGTAATGGAGATCTTAATCTAGATCCACTGGCTTGCATGACATTGAAGTGTTAAAAGGAGTTTCACCAACACACACTATTTTAAGAGGTAATTAGAGTAGTGGTTGTTTGGCTGAAGAAATAACAATGGAAATGCGCAAGTAGGATCATGAGGGGTGTAGTGTAGGTGGTAGTTGGTAACTATGACAGTAAAATGCGTTCTTCACTGTTGAAGGTGCTAAATAACTTTAACACTTAAGGCAGTATTGTAAGGAGTAATTTTCTTGTTGACAGATTAATGTGAAAGTCATAAAGGTGGTAGTGAAAAGAGGGAAGAAAAGGTTGTGTTCAGATTTAGAGGGTACTGGTGCTGGAGATTTACTAGAAAAGGTAAGCATACCAAAATGGCTAATTTTTGGTAATGTACCGCTGTCTTCTCTTTCAGGGGAACATGGGGTACTCAAAGTAGTTAGCAGTTAGCACATTAGTTGCATCCATTCCAAATGTGTTGTTTTTGCGTCATGATATGTTGTCCACTTGCTTTGAAGGGGAAATATCTTCCCTTCACTACTTGTTGCATTTTGAGGACTATTATATCATGTAATAAGAGACCAACTTAGATCCTTGTCTAATCTCAAAACTTATCATCAGCAAACATTTATCTCTACTTGTGGGGCTTACTTTTTAGTTGAAATACTCTTTAATTTTTAACTCTTCTACCAACGTTGTGCCAGGTCGTGATGACACTATTTAGTGGGATTGAGGGAGTGATTGTAGGAGTGCTTTATTTTACAACTTTAAATTCTTACTCAAACAAATCCACGAGTCCTATACAATCAGTTTTCAGTTTTTGATAGCTATAAATTACAAACTTTAGTTTTCTGCAACTTTTTTTTCCTTTTAGCAGATTAATCTGATGAGATAGTTGACTTTGTATTTCTTGGTATTTTAATTTCATCTTACAACAACAATACTACTTTGCTAATATTCTGATTTTGCCAATTTCATCTATGAAGGGAATCAAGCCTGCCTCATTGGCAAAAGTGAAGGATCCAAGAGTCAAAGCCTTTATAGAAAAATGTATTGCAAAAGCTTCTGAGCGGTTGCCTGCTAAGAAACTATTGGTTGATCCCTTTCTCCTTTCTGATGAGGATTCTGGAAACGTAGGTCGATCTTTGAGCATCAATTCCAGACATGCAGGTAATTATGTGATCACGCCTTTTGAAATGTCCCTTTATTATTGACTTTTGTGGGATCTTTACAGATATGAGTGATGATCAGTCTGATAGTGAAAGGAGTACAAAGGACCCATTGCCTGAAGGAAGCAGAGATTTCACAGTGCAGGGCCAAAGGAAGGACCTAAATACAATATTTCTTAAACTTCGAATTACTGATTCAACAGGTTACTGCTTGCTCCTTGTTTCTTTTGTCAAGCTTAAGATGCATCTATTAATTAGTTGTATAACATTTGCACTGTGGTATCAGGTCATATTAGAAACATTCACTTCCCCTTTGATATTGAAGTTGATACGGCGAATGCTGTTGCTAGTGAAATGGTTGCAGAGCTGGACCTGACAGATCAGGATGTTTCAGCAATAGCAGAAATGATCGATTCAGAAATTCGGTCATATATCCCAGATTGGGCACCAAGAGAAAACTCTAGCAATCACATCACCAATGAAGTTGCTTCTGATAACTTTACTTCTGGAGTCGGAGATGATGCTCCTCCCTTTACAATTGATCCTGCTTATTCGGGTAGTCTTGTGTTGGAAAGACTTCCTTCAGGTCGAAAGTACTGGTCTGTTTCACCGAAAACAACCAGTAATGGCAGCTCTCCACGCAGACAGGGGCCTTCATACACGTCGCTGACCGATTCACCAACTCATGAAGACAGTTGGACGGAAGAATTTGAAGAATCACCTGTTATCCTGAGAGAGGGAGGGAGTTCACATGTTGCTGCCTTACTCGGACACGAAGATTATAAATCTGAGACTCACGTGGATGATGATGCCAGTGTTCACCGTGATTTTGACTTTGGTGACAATGCTCATTCTGCGGATTTTAGTTATGCAAGCAGGCCTCATTCATCAGAGGAAAGAAATAACATGATCAGCAACAACTACTCAGCTGATATCAGACAAATCACCAAGGAACTGGAGAAACTGCGCGGATTGCAGCAAAAGGAGCTAAATGATCTGAAGAAGAAACATGACTCCGCTATCTCAGATCTTCTAAGCAAGCTTCCTCCTGAGATCCGTGGCATTTATGGTCACAAAGTATCTTCCGATAATTTGCATTGCTGATGTCCTGAAAACTCAAGTTCCTCTGTAAAGATGTAAGTTGCTGTTTTGTCTTTTGCTACTCAACTGTTGAGCCATTCTTTGATTGTCCCAATGACCTGACTGTCCCTGAAAAGTCCCAGAGTTGTCCCGGTATGCCGAAATTATTCGCTGTTGCTGACAATTTTCACATCCAAAATTCAAAAGTTCGAGGGGATAATCATGGACCGTATGTTTAGATACAGATTCATTTCTATCAAGTTTAAAATCAGTTCAGGGTCAGGAATTGAGGTAAATCTGAAAGAGGAGACAGAGGAAGCGATGCTTCTGAGATTGTTGGCGACTCCATTTGCTATGTTAGTTATTCGCATTTGCTTGCTTGCACGCTTATGTATAATGCGTCTTGCAAGTCATGTTGCAGCTTAAAACAGGACCTTCAATTTCATTGAATTGTATACTTGTACATATTTACCTGAGTACTTAGCTATTCGAAATGTCACTTGGTTGAAAATATGCAG</genome_strand>
        <mrna_strand>CCTGCTGGAGCTCGTGACATTTGAATATCCTTATATTGAGTGTTCCAACGCTGCTCAAATATATAAGAAAGTGACAGCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTAAGAAACATGATTTCTATCCCTGATGGAATGCATTCCAGTTGATCAATTAAAATTCAAAATATCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAATCAAGCCTGCCTCATTGGCAAAAGTGAAGGATCCAAGAGTCAAAGCCTTTATAGAAAAATGTATTGCAAAAGCTTCTGAGCGGTTGCCTGCTAAGAAACTATTGGTTGATCCCTTTCTCCTTTCTGATGAGGATTCTGGAAACGTAGGTCGATCTTTGAGCATCAATTCCAGACATGCAG................................................................ATATGAGTGATGATCAGTCTGATAGTGAAAGGAGTACAAAGGACCCATTGCCTGAAGGAAGCAGAGATTTCACAGTGCAGGGCCAAAGGAAGGACCTAAATACAATATTTCTTAAACTTCGAATTACTGATTCAACAG...................................................................................GTCATATTAGAAACATTCACTTCCCCTTTGATATTGAAGTTGATACGGCGAATGCTGTTGCTAGTGAAATGGTTGCAGAGCTGGACCTGACAGATCAGGATGTTTCAGCAATAGCAGAAATGATCGATTCAGAAATTCGGTCATATATCCCAGATTGGGCACCAAGAGAAAACTCTAGCAATCACATCACCAATGAAGTTGCTTCTGATAACTTTACTTCTGGAGTCGGAGATGATGCTCCTCCCTTTACAATTGATCCTGCTTATTCGGGTAGTCTTGTGTTGGAAAGACTTCCTTCAGGTCGAAAGTACTGGTCTGTTTCACCGAAAACAACCAGTAATGGCAGCTCTCCACGCAGACAGGGGCCTTCATACACGTCGCTGACCGATTCACCAACTCATGAAGACAGTTGGACGGAAGAATTTGAAGAATCACCTGTTATCCTGAGAGAGGGAGGGAGTTCACATGTTGCTGCCTTACTCGGACACGAAGATTATAAATCTGAGACTCACGTGGATGATGATGCCAGTGTTCACCGTGATTTTGACTTTGGTGACAATGCTCATTCTGCGGATTTTAGTTATGCAAGCAGGCCTCATTCATCAGAGGAAAGAAATAACATGATCAGCAACAACTACTCAGCTGATATCAGACAAATCACCAAGGAACTGGAGAAACTGCGCGGATTGCAGCAAAAGGAGCTAAATGATCTGAAGAAGAAACATGACTCCGCTATCTCAGATCTTCTAAGCAAGCTTCCTCCTGAGATCCGTGGCATTTATGGTCACAAAGTATCTTCCGATAATTTGCATTGCTGATGTCCTGAAAACTCAAGTTCCTCTGTAAAGATGTAAGTTGCTGTTTTGTCTTTTGCTACTCAACTGTTGAGCCATTCTTTGATTGTCCCAATGACCTGACTGTCCCTGAAAAGTCCCAGAGTTGTCCCGGTATGCCGAAATTATTCGCTGTTGCTGACAATTTTCACATCCAAAATTCAAAAGTTCGAGGGGATAATCATGGACCGTATGTTTAGATACAGATTCATTTCTATCAAGTTTAAAATCAGTTCAGGGTCAGGAATTGAGGTAAATCTGAAAGAGGAGACAGAGGAAGCGATGCTTCTGAGATTGTTGGCGACTCCATTTGCTATGTTAGTTATTCGCATTTGCTTGCTTGCACGCTTATGTATAATGCGTCTTGCAAGTCATGTTGCAGCTTAAAACAGGACCTTCAATTTCATTGAATTGTATACTTGTACATATTTACCTGAGTACTTAGCTATTCGAAATGTCACTTGGTTGAAAATATGCAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>15</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="-" PGL_start="5819" PGL_stop="4782"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="5819" e_stop="4782"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.997">
            <gDNA_exon_boundary e_start="5819" e_stop="4782" e_length="1038"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="5819" stop="4782"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U329351" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CCTTCTGGAGACTATAATTCTAGCAGATTTATTTCCTTCTTTAGTTTTTACTTCCCTTCATCAACTATTATGAGCTTCTAATCTGCTAGCTTACATAACAAAGCTACAATATTTCCTTTTTGGTAAGTTTCAAAAGGCAAAAGGAAAAGGACTAGAATAAAATCTTGGCAATATTTAGCTACTTGGTCAGGTTAGAATGAACATAGAAATGTACAAAAGATACCTCTTGCAGAACATTATCCAGTTGCCTCAGCAGTCAATCTGTTTTCATGTGATTGTATTCAGTTGAGACCCTTAAATCACTTAGGACTCCTTTTTAAGACCATAAAACATAGAGCAGCAAATGCAAAACTGTCGGAGTAACTAAAAGAACGAGAACAAAGCTGATCCATTGATAGTAAGACTTGCTAGATGCACCATTTGAAATAAATTTGAGCTTTATTTGCGCTTTGTACTTAAAATCTCATTGGACCTTAGAGCTATTTTGCGCTTTTCGCTTTTGATAACACTGTTGTCAGGTTAAGTAGAAAATTGATGACTCTCTTGATCGATGTAAGGCTCGTTTGGTGGCCAAGGTTATACAAACTCTTATGGTGTGGACTCTGGTGAGACATTCAATCAATTGGTTCATTCCTACAACTGTTAGACTGGTGTTTTCCCTTGTTACCTCATCTTATGAATGGCATATTCATTGGTCTGACATTAACAATACCTTTCTTAATGGTTTATTGACTCTGACTGTTTATATGGAGCAACCAATACAAGAAAAACGCTATGGGGACTCGGGTTGGAGTGTAGCGTAACTAAGAAATTCATTCCATTTAGAGCGGGCACGGGCACGGGCTAGGGGCTACGGGTGGGAAGATTGGTCATTAGACCACGACTATCATCAACTTGATGCACTTTGTCGGTCGGATTAATGAGTGAAGGACCTAATTATTAGTGACTTTAAAATTCTTTTTTTTCTTTTCGAAATTTGTAATTACCCTTCATTATTAACATTTGCGGATGAATTTATTTTTCTTACTCAAAATAGGA</gDNA_template>
            <first_frame> P  S  G  D  Y  N  S  S  R  F  I  S  F  F  S  F  Y  F  P  S  S  T  I  M  S  F  *  S  A  S  L  H  N  K  A  T  I  F  P  F  W  *  V  S  K  G  K  R  K  R  T  R  I  K  S  W  Q  Y  L  A  T  W  S  G  *  N  E  H  R  N  V  Q  K  I  P  L  A  E  H  Y  P  V  A  S  A  V  N  L  F  S  C  D  C  I  Q  L  R  P  L  N  H  L  G  L  L  F  K  T  I  K  H  R  A  A  N  A  K  L  S  E  *  L  K  E  R  E  Q  S  *  S  I  D  S  K  T  C  *  M  H  H  L  K  *  I  *  A  L  F  A  L  C  T  *  N  L  I  G  P  *  S  Y  F  A  L  F  A  F  D  N  T  V  V  R  L  S  R  K  L  M  T  L  L  I  D  V  R  L  V  W  W  P  R  L  Y  K  L  L  W  C  G  L  W  *  D  I  Q  S  I  G  S  F  L  Q  L  L  D  W  C  F  P  L  L  P  H  L  M  N  G  I  F  I  G  L  T  L  T  I  P  F  L  M  V  Y  *  L  *  L  F  I  W  S  N  Q  Y  K  K  N  A  M  G  T  R  V  G  V  *  R  N  *  E  I  H  S  I  *  S  G  H  G  H  G  L  G  A  T  G  G  K  I  G  H  *  T  T  T  I  I  N  L  M  H  F  V  G  R  I  N  E  *  R  T  *  L  L  V  T  L  K  F  F  F  F  F  S  K  F  V  I  T  L  H  Y  *  H  L  R  M  N  L  F  F  L  L  K  I  G </first_frame>
            <second_frame>  L  L  E  T  I  I  L  A  D  L  F  P  S  L  V  F  T  S  L  H  Q  L  L  *  A  S  N  L  L  A  Y  I  T  K  L  Q  Y  F  L  F  G  K  F  Q  K  A  K  G  K  G  L  E  *  N  L  G  N  I  *  L  L  G  Q  V  R  M  N  I  E  M  Y  K  R  Y  L  L  Q  N  I  I  Q  L  P  Q  Q  S  I  C  F  H  V  I  V  F  S  *  D  P  *  I  T  *  D  S  F  L  R  P  *  N  I  E  Q  Q  M  Q  N  C  R  S  N  *  K  N  E  N  K  A  D  P  L  I  V  R  L  A  R  C  T  I  *  N  K  F  E  L  Y  L  R  F  V  L  K  I  S  L  D  L  R  A  I  L  R  F  S  L  L  I  T  L  L  S  G  *  V  E  N  *  *  L  S  *  S  M  *  G  S  F  G  G  Q  G  Y  T  N  S  Y  G  V  D  S  G  E  T  F  N  Q  L  V  H  S  Y  N  C  *  T  G  V  F  P  C  Y  L  I  L  *  M  A  Y  S  L  V  *  H  *  Q  Y  L  S  *  W  F  I  D  S  D  C  L  Y  G  A  T  N  T  R  K  T  L  W  G  L  G  L  E  C  S  V  T  K  K  F  I  P  F  R  A  G  T  G  T  G  *  G  L  R  V  G  R  L  V  I  R  P  R  L  S  S  T  *  C  T  L  S  V  G  L  M  S  E  G  P  N  Y  *  *  L  *  N  S  F  F  S  F  R  N  L  *  L  P  F  I  I  N  I  C  G  *  I  Y  F  S  Y  S  K  *   </second_frame>
            <third_frame>   F  W  R  L  *  F  *  Q  I  Y  F  L  L  *  F  L  L  P  F  I  N  Y  Y  E  L  L  I  C  *  L  T  *  Q  S  Y  N  I  S  F  L  V  S  F  K  R  Q  K  E  K  D  *  N  K  I  L  A  I  F  S  Y  L  V  R  L  E  *  T  *  K  C  T  K  D  T  S  C  R  T  L  S  S  C  L  S  S  Q  S  V  F  M  *  L  Y  S  V  E  T  L  K  S  L  R  T  P  F  *  D  H  K  T  *  S  S  K  C  K  T  V  G  V  T  K  R  T  R  T  K  L  I  H  *  *  *  D  L  L  D  A  P  F  E  I  N  L  S  F  I  C  A  L  Y  L  K  S  H  W  T  L  E  L  F  C  A  F  R  F  *  *  H  C  C  Q  V  K  *  K  I  D  D  S  L  D  R  C  K  A  R  L  V  A  K  V  I  Q  T  L  M  V  W  T  L  V  R  H  S  I  N  W  F  I  P  T  T  V  R  L  V  F  S  L  V  T  S  S  Y  E  W  H  I  H  W  S  D  I  N  N  T  F  L  N  G  L  L  T  L  T  V  Y  M  E  Q  P  I  Q  E  K  R  Y  G  D  S  G  W  S  V  A  *  L  R  N  S  F  H  L  E  R  A  R  A  R  A  R  G  Y  G  W  E  D  W  S  L  D  H  D  Y  H  Q  L  D  A  L  C  R  S  D  *  *  V  K  D  L  I  I  S  D  F  K  I  L  F  F  L  F  E  I  C  N  Y  P  S  L  L  T  F  A  D  E  F  I  F  L  T  Q  N  R  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0246P13.1" strand="-"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="5292" stop="5017"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>273</number_coding_nucleotides>
                  <number_encoded_amino_acids>91</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KIDDSLDRCKARLVAKVIQTLMVWTLVRHSINWFIPTTVRLVFSLVTSSYEWHIHWSDINNTFLNGLLTLTVYMEQPIQEKRYGDSGWSVA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="-" PGL_start="16080" PGL_stop="14395"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="16080" e_stop="15275"/>
            <exon e_start="14595" e_stop="14395"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.969" acc_prob="0.906" e_score="0.998"/>
          <exon-only e_score="0.975"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="16080" e_stop="15275" e_length="806"/>
          </exon>
          <intron i_serial="1" don_prob="0.969" acc_prob="0.906">
            <gDNA_intron_boundary i_start="15274" i_stop="14596" i_length="679"/>
          </intron>
          <exon e_serial="2" e_score="0.975">
            <gDNA_exon_boundary e_start="14595" e_stop="14395" e_length="201"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16080" stop="15275"/>
              <exon start="14595" stop="14395"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U326772" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTACCCAGATGGGCTGTGATTGGTTGGCTATTGACGTCGTGCAGGAAGAGTTATGTCCAAGCAAACTTGAAGCTCGCATTGTTTTATGATTGGCTTTTCTATGATGAAACCACTGATAATGTAATGAACATTGAGCCTGCAATTCTTTTGATGGTGAACTCTATACCCAATTATATTGAAGTTACCCGTACTCTTCTCGAGTTCCTACTAATTGTGGTTGACAACTATGATATTGAGAGGAAGGAGATAGTCTCCAGAGGGGTGTCAACAGCTCTTTCTACACTAGTTAAAAGAGGAGTTGTTAGTTCACTTGATGTTTTGACTCGTTGTGACATGATAGCACCAGTTCATAGGGAAATGTTTGGAAAATTGGTATTGGTCATGCAAGGTATCCATTCCCAAAAAATAGGATCAGCCAGTATCATCCATGATATATCACCACCACCTAGCCATTTGCTCTCATCAAGCTTGGGATCCCAACACCCTAACAGGGTGAACTGTAATTAATTGTGTCATCACAGGCATATACAGGGAAGATCTGTTGATGCATCACTTTCGCCTCCCAAAGAATTGCTTGTGATCCTTTTGTCCCAACAGGCGGTTAAGTTCCACTCAACTGGATACAAGTTTCAAGGAGAAGTTTGAAATCAAGGTGATAGGAGAAACATCTCTTTCGCCTCCCAAAGAATTGCTTGTGATCTTTTTGCCCCAATAGCTAAAGTTGGACTCAAGTGATGAAAGTTTCAAGGAGAAGTTCAAAATCAAGGTGATAGGAAGTTTTTCTGGGTAATTCTTGATACCTGAAG : ATTTGGGTATGAAATCAAGGTCTTCTTTGAAGTATCTACATCTTCTGTCCATAGAAATCTCCTACATAGGCTCTCAATGCAAGCTTTCTTTGGCAACTGAGACCAAAATTACTCTACTTTTATTGCATTTGGACTTTATTTTCAATTTGCTGGTTCTGAAAGTTACGGCTACTGAGTAGTTTCTAGCCTTGAAATCTTAAT</gDNA_template>
            <first_frame> L  P  R  W  A  V  I  G  W  L  L  T  S  C  R  K  S  Y  V  Q  A  N  L  K  L  A  L  F  Y  D  W  L  F  Y  D  E  T  T  D  N  V  M  N  I  E  P  A  I  L  L  M  V  N  S  I  P  N  Y  I  E  V  T  R  T  L  L  E  F  L  L  I  V  V  D  N  Y  D  I  E  R  K  E  I  V  S  R  G  V  S  T  A  L  S  T  L  V  K  R  G  V  V  S  S  L  D  V  L  T  R  C  D  M  I  A  P  V  H  R  E  M  F  G  K  L  V  L  V  M  Q  G  I  H  S  Q  K  I  G  S  A  S  I  I  H  D  I  S  P  P  P  S  H  L  L  S  S  S  L  G  S  Q  H  P  N  R  V  N  C  N  *  L  C  H  H  R  H  I  Q  G  R  S  V  D  A  S  L  S  P  P  K  E  L  L  V  I  L  L  S  Q  Q  A  V  K  F  H  S  T  G  Y  K  F  Q  G  E  V  *  N  Q  G  D  R  R  N  I  S  F  A  S  Q  R  I  A  C  D  L  F  A  P  I  A  K  V  G  L  K  *  *  K  F  Q  G  E  V  Q  N  Q  G  D  R  K  F  F  W  V  I  L  D  T  *  R :   F  G  Y  E  I  K  V  F  F  E  V  S  T  S  S  V  H  R  N  L  L  H  R  L  S  M  Q  A  F  F  G  N  *  D  Q  N  Y  S  T  F  I  A  F  G  L  Y  F  Q  F  A  G  S  E  S  Y  G  Y  *  V  V  S  S  L  E  I  L   </first_frame>
            <second_frame>  Y  P  D  G  L  *  L  V  G  Y  *  R  R  A  G  R  V  M  S  K  Q  T  *  S  S  H  C  F  M  I  G  F  S  M  M  K  P  L  I  M  *  *  T  L  S  L  Q  F  F  *  W  *  T  L  Y  P  I  I  L  K  L  P  V  L  F  S  S  S  Y  *  L  W  L  T  T  M  I  L  R  G  R  R  *  S  P  E  G  C  Q  Q  L  F  L  H  *  L  K  E  E  L  L  V  H  L  M  F  *  L  V  V  T  *  *  H  Q  F  I  G  K  C  L  E  N  W  Y  W  S  C  K  V  S  I  P  K  K  *  D  Q  P  V  S  S  M  I  Y  H  H  H  L  A  I  C  S  H  Q  A  W  D  P  N  T  L  T  G  *  T  V  I  N  C  V  I  T  G  I  Y  R  E  D  L  L  M  H  H  F  R  L  P  K  N  C  L  *  S  F  C  P  N  R  R  L  S  S  T  Q  L  D  T  S  F  K  E  K  F  E  I  K  V  I  G  E  T  S  L  S  P  P  K  E  L  L  V  I  F  L  P  Q  *  L  K  L  D  S  S  D  E  S  F  K  E  K  F  K  I  K  V  I  G  S  F  S  G  *  F  L  I  P  E   : D  L  G  M  K  S  R  S  S  L  K  Y  L  H  L  L  S  I  E  I  S  Y  I  G  S  Q  C  K  L  S  L  A  T  E  T  K  I  T  L  L  L  L  H  L  D  F  I  F  N  L  L  V  L  K  V  T  A  T  E  *  F  L  A  L  K  S  *  </second_frame>
            <third_frame>   T  Q  M  G  C  D  W  L  A  I  D  V  V  Q  E  E  L  C  P  S  K  L  E  A  R  I  V  L  *  L  A  F  L  *  *  N  H  *  *  C  N  E  H  *  A  C  N  S  F  D  G  E  L  Y  T  Q  L  Y  *  S  Y  P  Y  S  S  R  V  P  T  N  C  G  *  Q  L  *  Y  *  E  E  G  D  S  L  Q  R  G  V  N  S  S  F  Y  T  S  *  K  R  S  C  *  F  T  *  C  F  D  S  L  *  H  D  S  T  S  S  *  G  N  V  W  K  I  G  I  G  H  A  R  Y  P  F  P  K  N  R  I  S  Q  Y  H  P  *  Y  I  T  T  T  *  P  F  A  L  I  K  L  G  I  P  T  P  *  Q  G  E  L  *  L  I  V  S  S  Q  A  Y  T  G  K  I  C  *  C  I  T  F  A  S  Q  R  I  A  C  D  P  F  V  P  T  G  G  *  V  P  L  N  W  I  Q  V  S  R  R  S  L  K  S  R  *  *  E  K  H  L  F  R  L  P  K  N  C  L  *  S  F  C  P  N  S  *  S  W  T  Q  V  M  K  V  S  R  R  S  S  K  S  R  *  *  E  V  F  L  G  N  S  *  Y  L  K  :  I  W  V  *  N  Q  G  L  L  *  S  I  Y  I  F  C  P  *  K  S  P  T  *  A  L  N  A  S  F  L  W  Q  L  R  P  K  L  L  Y  F  Y  C  I  W  T  L  F  S  I  C  W  F  *  K  L  R  L  L  S  S  F  *  P  *  N  L  N </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0246P13.1" strand="-"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="16080" stop="15574"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>504</number_coding_nucleotides>
                  <number_encoded_amino_acids>168</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LPRWAVIGWLLTSCRKSYVQANLKLALFYDWLFYDETTDNVMNIEPAILLMVNSIPNYIEVTRTLLEFLLIVVDNYDIERKEIVSRGVSTALSTLVKRGVVSSLDVLTRCDMIAPVHREMFGKLVLVMQGIHSQKIGSASIIHDISPPPSHLLSSSLGSQHPNRVNCN*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0246P13.1" strand="-"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="15290" stop="15275"/>
                    <exon start="14595" stop="14417"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>192</number_coding_nucleotides>
                  <number_encoded_amino_acids>64</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FLIPEDLGMKSRSSLKYLHLLSIEISYIGSQCKLSLATETKITLLLLHLDFIFNLLVLKVTATE*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="-" PGL_start="16532" PGL_stop="16122"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="16532" e_stop="16122"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="16532" e_stop="16122" e_length="411"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16532" stop="16122"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U345220" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTCCAAGTAATCCAATGATTGATGGATTGAAGAGAATGGAGGTTGTATTCTGTGTTCGACTTTTGAGGGAACAATTTCTTTTGTGTTTGAAGATAGGGAGGGACTTAATTAGGCTTTTGCAAGACTTGGTTCATATACCTGAGTTTAAAGCCATATGGAGAGACTTGTTATTGAATCCAAGACACTTTGGGGTGGATGGATTTAAAGATATTTCACAAATTTACCACACAAAAACTCCAAGTTCATACTTTTTGCTTCGAGTAACTCCTGAAATGGAAACTAAATTGAGGTTTTTGCTTACACATGTCAAGTTGGGTAACCAAAAGAGGTACCAGGTTTGGTTCGCTAAGAAGTTCCTTGGAGTACCTGGGAGTGAAGTCATTTTAACCGACATTGTTAGGTTTATATGCT</gDNA_template>
            <first_frame> F  Q  V  I  Q  *  L  M  D  *  R  E  W  R  L  Y  S  V  F  D  F  *  G  N  N  F  F  C  V  *  R  *  G  G  T  *  L  G  F  C  K  T  W  F  I  Y  L  S  L  K  P  Y  G  E  T  C  Y  *  I  Q  D  T  L  G  W  M  D  L  K  I  F  H  K  F  T  T  Q  K  L  Q  V  H  T  F  C  F  E  *  L  L  K  W  K  L  N  *  G  F  C  L  H  M  S  S  W  V  T  K  R  G  T  R  F  G  S  L  R  S  S  L  E  Y  L  G  V  K  S  F  *  P  T  L  L  G  L  Y  A </first_frame>
            <second_frame>  S  K  *  S  N  D  *  W  I  E  E  N  G  G  C  I  L  C  S  T  F  E  G  T  I  S  F  V  F  E  D  R  E  G  L  N  *  A  F  A  R  L  G  S  Y  T  *  V  *  S  H  M  E  R  L  V  I  E  S  K  T  L  W  G  G  W  I  *  R  Y  F  T  N  L  P  H  K  N  S  K  F  I  L  F  A  S  S  N  S  *  N  G  N  *  I  E  V  F  A  Y  T  C  Q  V  G  *  P  K  E  V  P  G  L  V  R  *  E  V  P  W  S  T  W  E  *  S  H  F  N  R  H  C  *  V  Y  M   </second_frame>
            <third_frame>   P  S  N  P  M  I  D  G  L  K  R  M  E  V  V  F  C  V  R  L  L  R  E  Q  F  L  L  C  L  K  I  G  R  D  L  I  R  L  L  Q  D  L  V  H  I  P  E  F  K  A  I  W  R  D  L  L  L  N  P  R  H  F  G  V  D  G  F  K  D  I  S  Q  I  Y  H  T  K  T  P  S  S  Y  F  L  L  R  V  T  P  E  M  E  T  K  L  R  F  L  L  T  H  V  K  L  G  N  Q  K  R  Y  Q  V  W  F  A  K  K  F  L  G  V  P  G  S  E  V  I  L  T  D  I  V  R  F  I  C  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0246P13.1" strand="-"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="16530" stop="16123"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>408</number_coding_nucleotides>
                  <number_encoded_amino_acids>136</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PSNPMIDGLKRMEVVFCVRLLREQFLLCLKIGRDLIRLLQDLVHIPEFKAIWRDLLLNPRHFGVDGFKDISQIYHTKTPSSYFLLRVTPEMETKLRFLLTHVKLGNQKRYQVWFAKKFLGVPGSEVILTDIVRFIC</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="-" PGL_start="17256" PGL_stop="16969"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="17256" e_stop="16969"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="17256" e_stop="16969" e_length="288"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17256" stop="16969"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U340612" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTTGCAGTACCTAAACAACCGCCGTCACATCCCCGCCGGTGGTGATTTCCCGGCGAAGCACCGAACAACTCGATCAGCAAGGTCCTAAGTTTGTTTCTGAAAATAATTGTGTAAGGTACGCTTATGTAGCTGTTTTTGGTGTTTAATCTTGCATCTATTGTGATTCATTCACTACAAATGGCCTTAAAGATTACTGAAAGAGGAATCCATGAAGCTGAAAATCCAATTGAAGTGTCTTTTAGAGAAGCTTTTGAGCTTCTTAAACCCCAACTAAACCCACCATTTACC</gDNA_template>
            <first_frame> F  A  V  P  K  Q  P  P  S  H  P  R  R  W  *  F  P  G  E  A  P  N  N  S  I  S  K  V  L  S  L  F  L  K  I  I  V  *  G  T  L  M  *  L  F  L  V  F  N  L  A  S  I  V  I  H  S  L  Q  M  A  L  K  I  T  E  R  G  I  H  E  A  E  N  P  I  E  V  S  F  R  E  A  F  E  L  L  K  P  Q  L  N  P  P  F  T </first_frame>
            <second_frame>  L  Q  Y  L  N  N  R  R  H  I  P  A  G  G  D  F  P  A  K  H  R  T  T  R  S  A  R  S  *  V  C  F  *  K  *  L  C  K  V  R  L  C  S  C  F  W  C  L  I  L  H  L  L  *  F  I  H  Y  K  W  P  *  R  L  L  K  E  E  S  M  K  L  K  I  Q  L  K  C  L  L  E  K  L  L  S  F  L  N  P  N  *  T  H  H  L   </second_frame>
            <third_frame>   C  S  T  *  T  T  A  V  T  S  P  P  V  V  I  S  R  R  S  T  E  Q  L  D  Q  Q  G  P  K  F  V  S  E  N  N  C  V  R  Y  A  Y  V  A  V  F  G  V  *  S  C  I  Y  C  D  S  F  T  T  N  G  L  K  D  Y  *  K  R  N  P  *  S  *  K  S  N  *  S  V  F  *  R  S  F  *  A  S  *  T  P  T  K  P  T  I  Y  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C06HBa0246P13.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="-" PGL_start="44363" PGL_stop="43308"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="44363" e_stop="43308"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="44363" e_stop="43308" e_length="1056"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44363" stop="43308"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U324860" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AACATTTAAGGGAGGAGATGACCATGGCAGCACAAAACTTCAAAAGCTCCATCCAAATCCAACCCTCATTTCACTGTCATCTCCTTCCTTCTTCCCTACCGACAATCTTCAAAATCCGCCACAAGCCTCAAAACCCCATATCTCTCAAATTCCACCCAATCCAAGCTTCAAATCACAAATACATCACTCCCACAAAACAACAGCAACAAGAACAAGATGATGGAATCCCCATGGAACATATCAAAACCCTAGTCAAATTCAAGTCCAGGCACAACTACATCCGGGTTCTAGAAGTTTCTAGAAGAGCCGACCACCCGTTAGCTGGTTCCCGTCTTCTTCTTCTCGACGCACCTGGTAACATCCACAGCATATCATTCCTCTTCAAATCAATCACCAACGCCTATTACGACGTTCTAGCAACTCTTCCCCCAATTCTACCACCTGGGCCATTAGGAATTCTCGGGTTCGGAGCCGGGTCAGCTGCGAAATTGATTCTGGAATTATACCCACAAGGTGTTATCCATGGATACGAGCTAGACCCATCTGTAATCTCCGTCGGAAGAGAATATTTAGGGCTTTCGAAAGTTGAAAAACAATACCCAGATCGTCTTTTCATCTATATCAGCAATGCACTGAATGCCAGTGTGAAAGATGGGTATTCTGGTCTAATAGTTGATTTGTTTAGTAAAGGGTGTTTGATACCTGAGCTTCAGAACCCACAAACATGGGAGAAATTGAAAGGGAAACTGAAAAAAGGAGGAAAGATAATGGTGAATGTTGGAGGGAGGTGTGTAGAACCAGAAGACAGTAGAAAAGATGGGAAAGTGATAATGGAAGAGACACTAATGGCAATGAATAAGGTTTTTGAAGGTGAAGTATTTGTATTGAATCTTGGAAATAGAAAGCAAGAAGATAGCAGTGTTGCCATTGTTGGTGGATTACCTGATTTGGAGAAATGGAGGATTTCTTTGCCTAAGCCTTTGAGATTTTATGTTGATATGTGGAACAAGTATGGTTGATGGTGATAAAAAAAAATTAATGAAATTCCTTACATTG</gDNA_template>
            <first_frame> N  I  *  G  R  R  *  P  W  Q  H  K  T  S  K  A  P  S  K  S  N  P  H  F  T  V  I  S  F  L  L  P  Y  R  Q  S  S  K  S  A  T  S  L  K  T  P  Y  L  S  N  S  T  Q  S  K  L  Q  I  T  N  T  S  L  P  Q  N  N  S  N  K  N  K  M  M  E  S  P  W  N  I  S  K  P  *  S  N  S  S  P  G  T  T  T  S  G  F  *  K  F  L  E  E  P  T  T  R  *  L  V  P  V  F  F  F  S  T  H  L  V  T  S  T  A  Y  H  S  S  S  N  Q  S  P  T  P  I  T  T  F  *  Q  L  F  P  Q  F  Y  H  L  G  H  *  E  F  S  G  S  E  P  G  Q  L  R  N  *  F  W  N  Y  T  H  K  V  L  S  M  D  T  S  *  T  H  L  *  S  P  S  E  E  N  I  *  G  F  R  K  L  K  N  N  T  Q  I  V  F  S  S  I  S  A  M  H  *  M  P  V  *  K  M  G  I  L  V  *  *  L  I  C  L  V  K  G  V  *  Y  L  S  F  R  T  H  K  H  G  R  N  *  K  G  N  *  K  K  E  E  R  *  W  *  M  L  E  G  G  V  *  N  Q  K  T  V  E  K  M  G  K  *  *  W  K  R  H  *  W  Q  *  I  R  F  L  K  V  K  Y  L  Y  *  I  L  E  I  E  S  K  K  I  A  V  L  P  L  L  V  D  Y  L  I  W  R  N  G  G  F  L  C  L  S  L  *  D  F  M  L  I  C  G  T  S  M  V  D  G  D  K  K  K  L  M  K  F  L  T  L </first_frame>
            <second_frame>  T  F  K  G  G  D  D  H  G  S  T  K  L  Q  K  L  H  P  N  P  T  L  I  S  L  S  S  P  S  F  F  P  T  D  N  L  Q  N  P  P  Q  A  S  K  P  H  I  S  Q  I  P  P  N  P  S  F  K  S  Q  I  H  H  S  H  K  T  T  A  T  R  T  R  *  W  N  P  H  G  T  Y  Q  N  P  S  Q  I  Q  V  Q  A  Q  L  H  P  G  S  R  S  F  *  K  S  R  P  P  V  S  W  F  P  S  S  S  S  R  R  T  W  *  H  P  Q  H  I  I  P  L  Q  I  N  H  Q  R  L  L  R  R  S  S  N  S  S  P  N  S  T  T  W  A  I  R  N  S  R  V  R  S  R  V  S  C  E  I  D  S  G  I  I  P  T  R  C  Y  P  W  I  R  A  R  P  I  C  N  L  R  R  K  R  I  F  R  A  F  E  S  *  K  T  I  P  R  S  S  F  H  L  Y  Q  Q  C  T  E  C  Q  C  E  R  W  V  F  W  S  N  S  *  F  V  *  *  R  V  F  D  T  *  A  S  E  P  T  N  M  G  E  I  E  R  E  T  E  K  R  R  K  D  N  G  E  C  W  R  E  V  C  R  T  R  R  Q  *  K  R  W  E  S  D  N  G  R  D  T  N  G  N  E  *  G  F  *  R  *  S  I  C  I  E  S  W  K  *  K  A  R  R  *  Q  C  C  H  C  W  W  I  T  *  F  G  E  M  E  D  F  F  A  *  A  F  E  I  L  C  *  Y  V  E  Q  V  W  L  M  V  I  K  K  N  *  *  N  S  L  H   </second_frame>
            <third_frame>   H  L  R  E  E  M  T  M  A  A  Q  N  F  K  S  S  I  Q  I  Q  P  S  F  H  C  H  L  L  P  S  S  L  P  T  I  F  K  I  R  H  K  P  Q  N  P  I  S  L  K  F  H  P  I  Q  A  S  N  H  K  Y  I  T  P  T  K  Q  Q  Q  Q  E  Q  D  D  G  I  P  M  E  H  I  K  T  L  V  K  F  K  S  R  H  N  Y  I  R  V  L  E  V  S  R  R  A  D  H  P  L  A  G  S  R  L  L  L  L  D  A  P  G  N  I  H  S  I  S  F  L  F  K  S  I  T  N  A  Y  Y  D  V  L  A  T  L  P  P  I  L  P  P  G  P  L  G  I  L  G  F  G  A  G  S  A  A  K  L  I  L  E  L  Y  P  Q  G  V  I  H  G  Y  E  L  D  P  S  V  I  S  V  G  R  E  Y  L  G  L  S  K  V  E  K  Q  Y  P  D  R  L  F  I  Y  I  S  N  A  L  N  A  S  V  K  D  G  Y  S  G  L  I  V  D  L  F  S  K  G  C  L  I  P  E  L  Q  N  P  Q  T  W  E  K  L  K  G  K  L  K  K  G  G  K  I  M  V  N  V  G  G  R  C  V  E  P  E  D  S  R  K  D  G  K  V  I  M  E  E  T  L  M  A  M  N  K  V  F  E  G  E  V  F  V  L  N  L  G  N  R  K  Q  E  D  S  S  V  A  I  V  G  G  L  P  D  L  E  K  W  R  I  S  L  P  K  P  L  R  F  Y  V  D  M  W  N  K  Y  G  *  W  *  *  K  K  I  N  E  I  P  Y  I  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0246P13.1" strand="-"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="44361" stop="43345"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1014</number_coding_nucleotides>
                  <number_encoded_amino_acids>338</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>HLREEMTMAAQNFKSSIQIQPSFHCHLLPSSLPTIFKIRHKPQNPISLKFHPIQASNHKYITPTKQQQQEQDDGIPMEHIKTLVKFKSRHNYIRVLEVSRRADHPLAGSRLLLLDAPGNIHSISFLFKSITNAYYDVLATLPPILPPGPLGILGFGAGSAAKLILELYPQGVIHGYELDPSVISVGREYLGLSKVEKQYPDRLFIYISNALNASVKDGYSGLIVDLFSKGCLIPELQNPQTWEKLKGKLKKGGKIMVNVGGRCVEPEDSRKDGKVIMEETLMAMNKVFEGEVFVLNLGNRKQEDSSVAIVGGLPDLEKWRISLPKPLRFYVDMWNKYG*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="-" PGL_start="49290" PGL_stop="44724"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="49290" e_stop="48671"/>
            <exon e_start="47238" e_stop="46798"/>
            <exon e_start="46678" e_stop="46536"/>
            <exon e_start="45878" e_stop="45788"/>
            <exon e_start="45515" e_stop="45376"/>
            <exon e_start="45164" e_stop="44724"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.954" e_score="1.000"/>
          <exon-intron don_prob="0.754" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.004" acc_prob="0.583" e_score="1.000"/>
          <exon-intron don_prob="0.973" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="0.975"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="49290" e_stop="48671" e_length="620"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.954">
            <gDNA_intron_boundary i_start="48670" i_stop="47239" i_length="1432"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="47238" e_stop="46798" e_length="441"/>
          </exon>
          <intron i_serial="2" don_prob="0.754" acc_prob="1.000">
            <gDNA_intron_boundary i_start="46797" i_stop="46679" i_length="119"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="46678" e_stop="46536" e_length="143"/>
          </exon>
          <intron i_serial="3" don_prob="0.998" acc_prob="0.995">
            <gDNA_intron_boundary i_start="46535" i_stop="45879" i_length="657"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="45878" e_stop="45788" e_length="91"/>
          </exon>
          <intron i_serial="4" don_prob="0.004" acc_prob="0.583">
            <gDNA_intron_boundary i_start="45787" i_stop="45516" i_length="272"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="45515" e_stop="45376" e_length="140"/>
          </exon>
          <intron i_serial="5" don_prob="0.973" acc_prob="0.999">
            <gDNA_intron_boundary i_start="45375" i_stop="45165" i_length="211"/>
          </intron>
          <exon e_serial="6" e_score="0.975">
            <gDNA_exon_boundary e_start="45164" e_stop="44724" e_length="441"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="49290" stop="48671"/>
              <exon start="47238" stop="46798"/>
              <exon start="46678" stop="46536"/>
              <exon start="45878" stop="45788"/>
              <exon start="45515" stop="45376"/>
              <exon start="45164" stop="44724"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U320212" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ACTGCCGAGTCTCTCGCAAAAATCCCAAATTTCATTTTCACTCTCACTCCGAACCCAAAAATCAGTGGCTAATGGACTCCTCCACCGTAGACGGCGGCGCATCGCTTCCATCAACCGGAACCGACGCTAGGAAGCGTCGTGTCTCTTACTTCTATGAGCCAACCATCGGCGATTATTACTACGGCCAAGGTCATCCGATGAAGCCGCACCGTATCAGAATGGCCCACAATCTCATCGTAAACTACTACCTACACAGGCGTATGGAAATCAGTCGTCCTTTTCCGGCGGGAGAGGATGATATCCGACGTTTTCACTCGCCGGATTATGTTGACTTCCTTGCTACCGTTTCACCGGAGACTCTTCATGACCATACACATTCACGTCATCTCAAACGGTTTAATGTTGGTGAGGATTGTCCTGTTTTCGATGGGCTTTTTGGGTTTTGTCAAGCTTCTGCTGGTGGATCTATTGGGGCTGCGGTTAAGCTTAATCGGCAGGATGCTGATATAACGATCAACTGGGCTGGTGGTCTGCACCATGCAAAGAAAAGTGAAGCTTCTGGTTTTTGCTATGTGAATGATATTGTTCTTGGTATTCTTGAGCTCCTCAAAGTCCACAAG : CGTGTATTGTACATAGACATTGATATTCACCATGGTGATGGTGTTGAGGAGGCTTTTTTCACCACAGATAGAGTCATGACAGTATCTTTTCATAAGTTTGGGGATTTCTTTCCTGGTACGGGGCACATCAAAGACATTGGTGCAAATCAGGGGAAGTACTATGCCCTAAATGTCCCATTGCATGATGGGATGGATGACGATAGTTTTGGTAGACTATTTCGTCCCACAATACAAAAAGTCATGGAGGTCTACCAACCTGAGGCTGTTGTTCTTCAATGTGGGGCTGATTCACTGGCTGGAGACAGGTTGGGTTGCTTCAACTTGTCTGTCAAGGGCCATGCCGCTTGCCTTAGGTACCTCAGATCCTTCAATGTCCCTCTGATGGTATTGGGTGGTGGAGGTTATACTATAAGAAATGTCGCTAGGTGCTGGTGCTATGAG : ACAGCAGTTGCAGTTGGGGTAGAACCTGAAAACAAGTTGCCTTACAACGAGTATTATGAATATTTTGGCCCAGATTATACTCTTCATGTTGAACCAATTCCCATGGAGAATCTAAATTCACCTAGGGATCTGGAGAAGATGAG : GAACATATTGCTTGAGCAAATCTCTCAGTTGCCTCATGCACCTAGTGTGCCATTTCAGACCACTCCTTCTACAACAGAAGTCCCAGAGGAG : AAAGAGGAAAATATGGATCGAAGGCCTAAACCACGGATATGGAATGGTGATGGTTATGAGTCTGATGCTGATGAAGACGAGAAACCTAGACAGCGAAGTTCAGATAGTAATCTTACTCCAGTGGAATCATCTGACATGAG : GGATGTGGACGACCAAGCCAATGCAGATGACATGGTTGATGATCATCCCTAGTTCAAAGCTCTTCTACATCGTCTCAAAATGCAATGACTGATACTATTTTTGGGTCGGAAGTAACAAGCCTTGCTATTTGACCTTTCGCCTCTCATGAGCAATTGTTTTGATGTCTCTTTTGCTGAAAATGGAACTAGAAAAATGAGTTGTTATAGTAGATTGTAGTTAGTTGGATATAGGCTAGTGATTGATGAATGAGAGCACAATGCTGTCTCTCGTAAATGGACCGGTGCACCACAAAGTAGACTTTGTTCTTATGGATACTGCTTATTACATACAAATATTATCAGTGTTCTGCAAGAGTTATCTGTGCAGTTCTGTGGATTTATCCATGTACTTTTGAGACAGTGGTTGTTTCATTTCTTCTTTGAACAAGATTATTGTTCATC</gDNA_template>
            <first_frame> T  A  E  S  L  A  K  I  P  N  F  I  F  T  L  T  P  N  P  K  I  S  G  *  W  T  P  P  P  *  T  A  A  H  R  F  H  Q  P  E  P  T  L  G  S  V  V  S  L  T  S  M  S  Q  P  S  A  I  I  T  T  A  K  V  I  R  *  S  R  T  V  S  E  W  P  T  I  S  S  *  T  T  T  Y  T  G  V  W  K  S  V  V  L  F  R  R  E  R  M  I  S  D  V  F  T  R  R  I  M  L  T  S  L  L  P  F  H  R  R  L  F  M  T  I  H  I  H  V  I  S  N  G  L  M  L  V  R  I  V  L  F  S  M  G  F  L  G  F  V  K  L  L  L  V  D  L  L  G  L  R  L  S  L  I  G  R  M  L  I  *  R  S  T  G  L  V  V  C  T  M  Q  R  K  V  K  L  L  V  F  A  M  *  M  I  L  F  L  V  F  L  S  S  S  K  S  T  S :   V  Y  C  T  *  T  L  I  F  T  M  V  M  V  L  R  R  L  F  S  P  Q  I  E  S  *  Q  Y  L  F  I  S  L  G  I  S  F  L  V  R  G  T  S  K  T  L  V  Q  I  R  G  S  T  M  P  *  M  S  H  C  M  M  G  W  M  T  I  V  L  V  D  Y  F  V  P  Q  Y  K  K  S  W  R  S  T  N  L  R  L  L  F  F  N  V  G  L  I  H  W  L  E  T  G  W  V  A  S  T  C  L  S  R  A  M  P  L  A  L  G  T  S  D  P  S  M  S  L  *  W  Y  W  V  V  E  V  I  L  *  E  M  S  L  G  A  G  A  M  R :   Q  Q  L  Q  L  G  *  N  L  K  T  S  C  L  T  T  S  I  M  N  I  L  A  Q  I  I  L  F  M  L  N  Q  F  P  W  R  I  *  I  H  L  G  I  W  R  R  *   : G  T  Y  C  L  S  K  S  L  S  C  L  M  H  L  V  C  H  F  R  P  L  L  L  Q  Q  K  S  Q  R  R :   K  R  K  I  W  I  E  G  L  N  H  G  Y  G  M  V  M  V  M  S  L  M  L  M  K  T  R  N  L  D  S  E  V  Q  I  V  I  L  L  Q  W  N  H  L  T  *   : G  M  W  T  T  K  P  M  Q  M  T  W  L  M  I  I  P  S  S  K  L  F  Y  I  V  S  K  C  N  D  *  Y  Y  F  W  V  G  S  N  K  P  C  Y  L  T  F  R  L  S  *  A  I  V  L  M  S  L  L  L  K  M  E  L  E  K  *  V  V  I  V  D  C  S  *  L  D  I  G  *  *  L  M  N  E  S  T  M  L  S  L  V  N  G  P  V  H  H  K  V  D  F  V  L  M  D  T  A  Y  Y  I  Q  I  L  S  V  F  C  K  S  Y  L  C  S  S  V  D  L  S  M  Y  F  *  D  S  G  C  F  I  S  S  L  N  K  I  I  V  H  </first_frame>
            <second_frame>  L  P  S  L  S  Q  K  S  Q  I  S  F  S  L  S  L  R  T  Q  K  S  V  A  N  G  L  L  H  R  R  R  R  R  I  A  S  I  N  R  N  R  R  *  E  A  S  C  L  L  L  L  *  A  N  H  R  R  L  L  L  R  P  R  S  S  D  E  A  A  P  Y  Q  N  G  P  Q  S  H  R  K  L  L  P  T  Q  A  Y  G  N  Q  S  S  F  S  G  G  R  G  *  Y  P  T  F  S  L  A  G  L  C  *  L  P  C  Y  R  F  T  G  D  S  S  *  P  Y  T  F  T  S  S  Q  T  V  *  C  W  *  G  L  S  C  F  R  W  A  F  W  V  L  S  S  F  C  W  W  I  Y  W  G  C  G  *  A  *  S  A  G  C  *  Y  N  D  Q  L  G  W  W  S  A  P  C  K  E  K  *  S  F  W  F  L  L  C  E  *  Y  C  S  W  Y  S  *  A  P  Q  S  P  Q   : A  C  I  V  H  R  H  *  Y  S  P  W  *  W  C  *  G  G  F  F  H  H  R  *  S  H  D  S  I  F  S  *  V  W  G  F  L  S  W  Y  G  A  H  Q  R  H  W  C  K  S  G  E  V  L  C  P  K  C  P  I  A  *  W  D  G  *  R  *  F  W  *  T  I  S  S  H  N  T  K  S  H  G  G  L  P  T  *  G  C  C  S  S  M  W  G  *  F  T  G  W  R  Q  V  G  L  L  Q  L  V  C  Q  G  P  C  R  L  P  *  V  P  Q  I  L  Q  C  P  S  D  G  I  G  W  W  R  L  Y  Y  K  K  C  R  *  V  L  V  L  *   : D  S  S  C  S  W  G  R  T  *  K  Q  V  A  L  Q  R  V  L  *  I  F  W  P  R  L  Y  S  S  C  *  T  N  S  H  G  E  S  K  F  T  *  G  S  G  E  D  E  :  E  H  I  A  *  A  N  L  S  V  A  S  C  T  *  C  A  I  S  D  H  S  F  Y  N  R  S  P  R  G   : E  R  G  K  Y  G  S  K  A  *  T  T  D  M  E  W  *  W  L  *  V  *  C  *  *  R  R  E  T  *  T  A  K  F  R  *  *  S  Y  S  S  G  I  I  *  H  E  :  G  C  G  R  P  S  Q  C  R  *  H  G  *  *  S  S  L  V  Q  S  S  S  T  S  S  Q  N  A  M  T  D  T  I  F  G  S  E  V  T  S  L  A  I  *  P  F  A  S  H  E  Q  L  F  *  C  L  F  C  *  K  W  N  *  K  N  E  L  L  *  *  I  V  V  S  W  I  *  A  S  D  *  *  M  R  A  Q  C  C  L  S  *  M  D  R  C  T  T  K  *  T  L  F  L  W  I  L  L  I  T  Y  K  Y  Y  Q  C  S  A  R  V  I  C  A  V  L  W  I  Y  P  C  T  F  E  T  V  V  V  S  F  L  L  *  T  R  L  L  F  I </second_frame>
            <third_frame>   C  R  V  S  R  K  N  P  K  F  H  F  H  S  H  S  E  P  K  N  Q  W  L  M  D  S  S  T  V  D  G  G  A  S  L  P  S  T  G  T  D  A  R  K  R  R  V  S  Y  F  Y  E  P  T  I  G  D  Y  Y  Y  G  Q  G  H  P  M  K  P  H  R  I  R  M  A  H  N  L  I  V  N  Y  Y  L  H  R  R  M  E  I  S  R  P  F  P  A  G  E  D  D  I  R  R  F  H  S  P  D  Y  V  D  F  L  A  T  V  S  P  E  T  L  H  D  H  T  H  S  R  H  L  K  R  F  N  V  G  E  D  C  P  V  F  D  G  L  F  G  F  C  Q  A  S  A  G  G  S  I  G  A  A  V  K  L  N  R  Q  D  A  D  I  T  I  N  W  A  G  G  L  H  H  A  K  K  S  E  A  S  G  F  C  Y  V  N  D  I  V  L  G  I  L  E  L  L  K  V  H  K  :  R  V  L  Y  I  D  I  D  I  H  H  G  D  G  V  E  E  A  F  F  T  T  D  R  V  M  T  V  S  F  H  K  F  G  D  F  F  P  G  T  G  H  I  K  D  I  G  A  N  Q  G  K  Y  Y  A  L  N  V  P  L  H  D  G  M  D  D  D  S  F  G  R  L  F  R  P  T  I  Q  K  V  M  E  V  Y  Q  P  E  A  V  V  L  Q  C  G  A  D  S  L  A  G  D  R  L  G  C  F  N  L  S  V  K  G  H  A  A  C  L  R  Y  L  R  S  F  N  V  P  L  M  V  L  G  G  G  G  Y  T  I  R  N  V  A  R  C  W  C  Y  E  :  T  A  V  A  V  G  V  E  P  E  N  K  L  P  Y  N  E  Y  Y  E  Y  F  G  P  D  Y  T  L  H  V  E  P  I  P  M  E  N  L  N  S  P  R  D  L  E  K  M  R :   N  I  L  L  E  Q  I  S  Q  L  P  H  A  P  S  V  P  F  Q  T  T  P  S  T  T  E  V  P  E  E  :  K  E  E  N  M  D  R  R  P  K  P  R  I  W  N  G  D  G  Y  E  S  D  A  D  E  D  E  K  P  R  Q  R  S  S  D  S  N  L  T  P  V  E  S  S  D  M  R :   D  V  D  D  Q  A  N  A  D  D  M  V  D  D  H  P  *  F  K  A  L  L  H  R  L  K  M  Q  *  L  I  L  F  L  G  R  K  *  Q  A  L  L  F  D  L  S  P  L  M  S  N  C  F  D  V  S  F  A  E  N  G  T  R  K  M  S  C  Y  S  R  L  *  L  V  G  Y  R  L  V  I  D  E  *  E  H  N  A  V  S  R  K  W  T  G  A  P  Q  S  R  L  C  S  Y  G  Y  C  L  L  H  T  N  I  I  S  V  L  Q  E  L  S  V  Q  F  C  G  F  I  H  V  L  L  R  Q  W  L  F  H  F  F  F  E  Q  D  Y  C  S   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0246P13.1" strand="-"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="49288" stop="48671"/>
                    <exon start="47238" stop="46798"/>
                    <exon start="46678" stop="46536"/>
                    <exon start="45878" stop="45788"/>
                    <exon start="45515" stop="45376"/>
                    <exon start="45164" stop="45113"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1482</number_coding_nucleotides>
                  <number_encoded_amino_acids>494</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>CRVSRKNPKFHFHSHSEPKNQWLMDSSTVDGGASLPSTGTDARKRRVSYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVNYYLHRRMEISRPFPAGEDDIRRFHSPDYVDFLATVSPETLHDHTHSRHLKRFNVGEDCPVFDGLFGFCQASAGGSIGAAVKLNRQDADITINWAGGLHHAKKSEASGFCYVNDIVLGILELLKVHKRVLYIDIDIHHGDGVEEAFFTTDRVMTVSFHKFGDFFPGTGHIKDIGANQGKYYALNVPLHDGMDDDSFGRLFRPTIQKVMEVYQPEAVVLQCGADSLAGDRLGCFNLSVKGHAACLRYLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPENKLPYNEYYEYFGPDYTLHVEPIPMENLNSPRDLEKMRNILLEQISQLPHAPSVPFQTTPSTTEVPEEKEENMDRRPKPRIWNGDGYESDADEDEKPRQRSSDSNLTPVESSDMRDVDDQANADDMVDDHP*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="-" PGL_start="61616" PGL_stop="60927"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="61616" e_stop="60927"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="61616" e_stop="60927" e_length="690"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61616" stop="60927"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U331819" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AAAGAAGATGCAAGTTTTGTACATTTCTAGGTATATATAAGAAGATGAAATTTTACAAAATTTTAGATATGGTGGAACACATCAAGATTTTCCCCACTCAATGTATTATTATTATTACTGTAATTTTCTTCATTCTTGATACCAACATAAGGATACTGAATAAGAGAATCAATTTTGTTGTCAGCATCCCATTCCAACATTTCATTCATCTGAATTCCAACAGAATTGTAATGGCTAATCATAGTATTTGAACTGTTACTTGTACTCATTCTTGAAGTTGAGCTATCAGAAATATCGCTCTCTGTTGTCATGTGTACATGTTGAAAATTTGAGCAAAACCCAAAATCTTGATTCCCTTCAATTTGGTTGTGATGATGAGCATAAGGTCCAATTGGATTCACACTTGCTTGGAACTCATACAGAAACAGAGGATCAAAGACCTGTTTACTCACAAGTTGGTTTTTTGAAACTTCTGTTAACTCTCTAGTAACTGCTTGGCTGTTGAAATTTCTTTTACTATTGAAAAAATGAAATGGTTGCTGTATTTCAGCTGAATCTGACATATTTGGGAGCTTGGGCATCAGCAAACTTGAGGTCTTATCTGTACAATTCGGCTCATTTCTTACTTGATGATTTTCACTTAGTGGCTTGTGGGTATTTGGATCTATGCCTTGCTTTATTAGCTTCCTC</gDNA_template>
            <first_frame> K  E  D  A  S  F  V  H  F  *  V  Y  I  R  R  *  N  F  T  K  F  *  I  W  W  N  T  S  R  F  S  P  L  N  V  L  L  L  L  L  *  F  S  S  F  L  I  P  T  *  G  Y  *  I  R  E  S  I  L  L  S  A  S  H  S  N  I  S  F  I  *  I  P  T  E  L  *  W  L  I  I  V  F  E  L  L  L  V  L  I  L  E  V  E  L  S  E  I  S  L  S  V  V  M  C  T  C  *  K  F  E  Q  N  P  K  S  *  F  P  S  I  W  L  *  *  *  A  *  G  P  I  G  F  T  L  A  W  N  S  Y  R  N  R  G  S  K  T  C  L  L  T  S  W  F  F  E  T  S  V  N  S  L  V  T  A  W  L  L  K  F  L  L  L  L  K  K  *  N  G  C  C  I  S  A  E  S  D  I  F  G  S  L  G  I  S  K  L  E  V  L  S  V  Q  F  G  S  F  L  T  *  *  F  S  L  S  G  L  W  V  F  G  S  M  P  C  F  I  S  F  L </first_frame>
            <second_frame>  K  K  M  Q  V  L  Y  I  S  R  Y  I  *  E  D  E  I  L  Q  N  F  R  Y  G  G  T  H  Q  D  F  P  H  S  M  Y  Y  Y  Y  Y  C  N  F  L  H  S  *  Y  Q  H  K  D  T  E  *  E  N  Q  F  C  C  Q  H  P  I  P  T  F  H  S  S  E  F  Q  Q  N  C  N  G  *  S  *  Y  L  N  C  Y  L  Y  S  F  L  K  L  S  Y  Q  K  Y  R  S  L  L  S  C  V  H  V  E  N  L  S  K  T  Q  N  L  D  S  L  Q  F  G  C  D  D  E  H  K  V  Q  L  D  S  H  L  L  G  T  H  T  E  T  E  D  Q  R  P  V  Y  S  Q  V  G  F  L  K  L  L  L  T  L  *  *  L  L  G  C  *  N  F  F  Y  Y  *  K  N  E  M  V  A  V  F  Q  L  N  L  T  Y  L  G  A  W  A  S  A  N  L  R  S  Y  L  Y  N  S  A  H  F  L  L  D  D  F  H  L  V  A  C  G  Y  L  D  L  C  L  A  L  L  A  S   </second_frame>
            <third_frame>   R  R  C  K  F  C  T  F  L  G  I  Y  K  K  M  K  F  Y  K  I  L  D  M  V  E  H  I  K  I  F  P  T  Q  C  I  I  I  I  T  V  I  F  F  I  L  D  T  N  I  R  I  L  N  K  R  I  N  F  V  V  S  I  P  F  Q  H  F  I  H  L  N  S  N  R  I  V  M  A  N  H  S  I  *  T  V  T  C  T  H  S  *  S  *  A  I  R  N  I  A  L  C  C  H  V  Y  M  L  K  I  *  A  K  P  K  I  L  I  P  F  N  L  V  V  M  M  S  I  R  S  N  W  I  H  T  C  L  E  L  I  Q  K  Q  R  I  K  D  L  F  T  H  K  L  V  F  *  N  F  C  *  L  S  S  N  C  L  A  V  E  I  S  F  T  I  E  K  M  K  W  L  L  Y  F  S  *  I  *  H  I  W  E  L  G  H  Q  Q  T  *  G  L  I  C  T  I  R  L  I  S  Y  L  M  I  F  T  *  W  L  V  G  I  W  I  Y  A  L  L  Y  *  L  P  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0246P13.1" strand="-"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="61614" stop="61366"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>246</number_coding_nucleotides>
                  <number_encoded_amino_acids>82</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RRCKFCTFLGIYKKMKFYKILDMVEHIKIFPTQCIIIITVIFFILDTNIRILNKRINFVVSIPFQHFIHLNSNRIVMANHSI*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0246P13.1" strand="-"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="61372" stop="61130"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>240</number_coding_nucleotides>
                  <number_encoded_amino_acids>80</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>YLNCYLYSFLKLSYQKYRSLLSCVHVENLSKTQNLDSLQFGCDDEHKVQLDSHLLGTHTETEDQRPVYSQVGFLKLLLTL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="-" PGL_start="64962" PGL_stop="64310"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="64962" e_stop="64785"/>
            <exon e_start="64700" e_stop="64485"/>
            <exon e_start="64406" e_stop="64310"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.859" e_score="0.978"/>
          <exon-intron don_prob="0.996" acc_prob="0.730" e_score="0.963"/>
          <exon-only e_score="0.969"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.978">
            <gDNA_exon_boundary e_start="64962" e_stop="64785" e_length="178"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.859">
            <gDNA_intron_boundary i_start="64784" i_stop="64701" i_length="84"/>
          </intron>
          <exon e_serial="2" e_score="0.963">
            <gDNA_exon_boundary e_start="64700" e_stop="64485" e_length="216"/>
          </exon>
          <intron i_serial="2" don_prob="0.996" acc_prob="0.730">
            <gDNA_intron_boundary i_start="64484" i_stop="64407" i_length="78"/>
          </intron>
          <exon e_serial="3" e_score="0.969">
            <gDNA_exon_boundary e_start="64406" e_stop="64310" e_length="97"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64962" stop="64785"/>
              <exon start="64700" stop="64485"/>
              <exon start="64406" stop="64310"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U343658" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GGTGATAGAGTTCGAAGACCGCAAACTTGTACCTTTACTTCCAGCTGATCCACTGAGGAATTACACTGCGGGTGAGACAAGAGGAGGGGTTGACCGAAGTGATGTGAAACCCCTACAAATTATTCAGCCAGAGGGTCCAAGCTTTCGCGTCGATGGGAACTATGTTCAATGGCAAAAG : TGGAATTTCCGAGTAGGTTTCACCCCTAGGGAGGGTTTGGTTATACACTCTGTGGCATATCTTGATGGTAGCAGGGGACGAAGATCCATAGCCCATAGGTTGAGTTTTGTGGAGATGGTTGTCCCCTATGGGGATCCAAATGATCCACATTACAGAAAAAATGCATTTGATGCAGGAGAAGATGGCCTTGGAAAGAATGCCCATTCACTTAAGAGG : GGATGCGATTGTTTAGGATACATAAAGTACTTTGATGCCAATTTTACAAATTTTACTGGAGGAGTAGAAACCATCAAAAATTGTGTATGTTTGCATG</gDNA_template>
            <first_frame> G  D  R  V  R  R  P  Q  T  C  T  F  T  S  S  *  S  T  E  E  L  H  C  G  *  D  K  R  R  G  *  P  K  *  C  E  T  P  T  N  Y  S  A  R  G  S  K  L  S  R  R  W  E  L  C  S  M  A  K   : V  E  F  P  S  R  F  H  P  *  G  G  F  G  Y  T  L  C  G  I  S  *  W  *  Q  G  T  K  I  H  S  P  *  V  E  F  C  G  D  G  C  P  L  W  G  S  K  *  S  T  L  Q  K  K  C  I  *  C  R  R  R  W  P  W  K  E  C  P  F  T  *  E   : G  M  R  L  F  R  I  H  K  V  L  *  C  Q  F  Y  K  F  Y  W  R  S  R  N  H  Q  K  L  C  M  F  A   </first_frame>
            <second_frame>  V  I  E  F  E  D  R  K  L  V  P  L  L  P  A  D  P  L  R  N  Y  T  A  G  E  T  R  G  G  V  D  R  S  D  V  K  P  L  Q  I  I  Q  P  E  G  P  S  F  R  V  D  G  N  Y  V  Q  W  Q  K  :  W  N  F  R  V  G  F  T  P  R  E  G  L  V  I  H  S  V  A  Y  L  D  G  S  R  G  R  R  S  I  A  H  R  L  S  F  V  E  M  V  V  P  Y  G  D  P  N  D  P  H  Y  R  K  N  A  F  D  A  G  E  D  G  L  G  K  N  A  H  S  L  K  R  :  G  C  D  C  L  G  Y  I  K  Y  F  D  A  N  F  T  N  F  T  G  G  V  E  T  I  K  N  C  V  C  L  H  </second_frame>
            <third_frame>   *  *  S  S  K  T  A  N  L  Y  L  Y  F  Q  L  I  H  *  G  I  T  L  R  V  R  Q  E  E  G  L  T  E  V  M  *  N  P  Y  K  L  F  S  Q  R  V  Q  A  F  A  S  M  G  T  M  F  N  G  K  S :   G  I  S  E  *  V  S  P  L  G  R  V  W  L  Y  T  L  W  H  I  L  M  V  A  G  D  E  D  P  *  P  I  G  *  V  L  W  R  W  L  S  P  M  G  I  Q  M  I  H  I  T  E  K  M  H  L  M  Q  E  K  M  A  L  E  R  M  P  I  H  L  R  G :   D  A  I  V  *  D  T  *  S  T  L  M  P  I  L  Q  I  L  L  E  E  *  K  P  S  K  I  V  Y  V  C  M </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0246P13.1" strand="-"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="64961" stop="64785"/>
                    <exon start="64700" stop="64485"/>
                    <exon start="64406" stop="64311"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>489</number_coding_nucleotides>
                  <number_encoded_amino_acids>163</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VIEFEDRKLVPLLPADPLRNYTAGETRGGVDRSDVKPLQIIQPEGPSFRVDGNYVQWQKWNFRVGFTPREGLVIHSVAYLDGSRGRRSIAHRLSFVEMVVPYGDPNDPHYRKNAFDAGEDGLGKNAHSLKRGCDCLGYIKYFDANFTNFTGGVETIKNCVCLH</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="+" PGL_start="94214" PGL_stop="95440"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="94214" e_stop="94422"/>
            <exon e_start="94490" e_stop="95440"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.990" acc_prob="0.985" e_score="1.000"/>
          <exon-only e_score="0.996"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="94214" e_stop="94422" e_length="209"/>
          </exon>
          <intron i_serial="1" don_prob="0.990" acc_prob="0.985">
            <gDNA_intron_boundary i_start="94423" i_stop="94489" i_length="67"/>
          </intron>
          <exon e_serial="2" e_score="0.996">
            <gDNA_exon_boundary e_start="94490" e_stop="95440" e_length="951"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94214" stop="94422"/>
              <exon start="94490" stop="95440"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U320241" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATTTCTCTAGAAGCTTCTTTTCATTCTTCCGACCACAATTTCCGATTTCAATTGCTCTTTTCGCACGAGCATGAGTCAGTCTACACAAATCGTCAAATTCCTCTACAGTTACGGCGGTAGAATCCTTCCTCGTCCCTCCGACGGCACACTCCGTTACATCGGCGGTTTTACTAGAGTCCTTTCCGTTGATAGATCTATTTCATTTGCAG : AGTTGATGGTGAAGTTTGGAGAATTGTATGGATCGTCTATGCGTTTAAAATGTAAGATGCCGACAGAGGATTTGGATGTTTTGGTATCGATTACCTGTGACGAAGACCTGGCTAATGTGATTGAAGAGTACGATCGAGTTTCAGCAATGACGAATACAGAGATGAAGATTAGGGCGTTATTATCTCCAATAAATTTGCCGAAAAAGGACTCTCGTCCGTCTTCGCCAATGTCTTGCTTTGATTTTGCTGCGTCGAGCTTGAAGCCCGGAAAATTCGTCCAGTTCAATTCGCCTCCGTCGTATGCGGCGGCGCGTAGACTGTTCTCACCAGTTGTGGGTTACCCGACCGGGAGACGAACAGACGGCGAGGAGCTTTACTATCCGTACTGTGGACAGGCAGGCGTCAAGCCTCTGTATAACGTTGTTCCTATCCATTGCCAATAGAAAAAAGATACCCGAGAGGTAGAGGTAGTTACAGTATTGCCGGAGAGTTGTTTACATAGATGAAACGAATCTCCTTCCCACCCACAAAAAAGGGTCAGATAAACAAAATATTCATCATCACATCAAATAACAAAAAGACTCATTCAATATAATATTTTGATGCTTGATTCAAATTGTATATTGCTTGAGATTATTGCTTATTCAATTGTGAGCTCGATTTAGGATTCGAGCTGATATATTGTTATCTAAATTCTATGATTGGCGTTTTGTTGCTCTGGGTTGTCTATATGGCACAATCCCTCCATCGTTGAGCTTTACCCATGGTGAGCAAGTGGTAAGATCTGAGTACATCTATTATAGTTATTCACTTGTTCTTGTTTTCTTGAGTGTTAAAACTTAGAACGAAGGGTGAAGATATATACTTCATTTATGTGAGGGCTTGAAATAGATTATGGGGTTGTAATCCATATTATAAATATATCTTCACCTCTCATTAGATGATTTGAAT</gDNA_template>
            <first_frame> I  S  L  E  A  S  F  H  S  S  D  H  N  F  R  F  Q  L  L  F  S  H  E  H  E  S  V  Y  T  N  R  Q  I  P  L  Q  L  R  R  *  N  P  S  S  S  L  R  R  H  T  P  L  H  R  R  F  Y  *  S  P  F  R  *  *  I  Y  F  I  C  R :   V  D  G  E  V  W  R  I  V  W  I  V  Y  A  F  K  M  *  D  A  D  R  G  F  G  C  F  G  I  D  Y  L  *  R  R  P  G  *  C  D  *  R  V  R  S  S  F  S  N  D  E  Y  R  D  E  D  *  G  V  I  I  S  N  K  F  A  E  K  G  L  S  S  V  F  A  N  V  L  L  *  F  C  C  V  E  L  E  A  R  K  I  R  P  V  Q  F  A  S  V  V  C  G  G  A  *  T  V  L  T  S  C  G  L  P  D  R  E  T  N  R  R  R  G  A  L  L  S  V  L  W  T  G  R  R  Q  A  S  V  *  R  C  S  Y  P  L  P  I  E  K  R  Y  P  R  G  R  G  S  Y  S  I  A  G  E  L  F  T  *  M  K  R  I  S  F  P  P  T  K  K  G  Q  I  N  K  I  F  I  I  T  S  N  N  K  K  T  H  S  I  *  Y  F  D  A  *  F  K  L  Y  I  A  *  D  Y  C  L  F  N  C  E  L  D  L  G  F  E  L  I  Y  C  Y  L  N  S  M  I  G  V  L  L  L  W  V  V  Y  M  A  Q  S  L  H  R  *  A  L  P  M  V  S  K  W  *  D  L  S  T  S  I  I  V  I  H  L  F  L  F  S  *  V  L  K  L  R  T  K  G  E  D  I  Y  F  I  Y  V  R  A  *  N  R  L  W  G  C  N  P  Y  Y  K  Y  I  F  T  S  H  *  M  I  *   </first_frame>
            <second_frame>  F  L  *  K  L  L  F  I  L  P  T  T  I  S  D  F  N  C  S  F  R  T  S  M  S  Q  S  T  Q  I  V  K  F  L  Y  S  Y  G  G  R  I  L  P  R  P  S  D  G  T  L  R  Y  I  G  G  F  T  R  V  L  S  V  D  R  S  I  S  F  A   : E  L  M  V  K  F  G  E  L  Y  G  S  S  M  R  L  K  C  K  M  P  T  E  D  L  D  V  L  V  S  I  T  C  D  E  D  L  A  N  V  I  E  E  Y  D  R  V  S  A  M  T  N  T  E  M  K  I  R  A  L  L  S  P  I  N  L  P  K  K  D  S  R  P  S  S  P  M  S  C  F  D  F  A  A  S  S  L  K  P  G  K  F  V  Q  F  N  S  P  P  S  Y  A  A  A  R  R  L  F  S  P  V  V  G  Y  P  T  G  R  R  T  D  G  E  E  L  Y  Y  P  Y  C  G  Q  A  G  V  K  P  L  Y  N  V  V  P  I  H  C  Q  *  K  K  D  T  R  E  V  E  V  V  T  V  L  P  E  S  C  L  H  R  *  N  E  S  P  S  H  P  Q  K  R  V  R  *  T  K  Y  S  S  S  H  Q  I  T  K  R  L  I  Q  Y  N  I  L  M  L  D  S  N  C  I  L  L  E  I  I  A  Y  S  I  V  S  S  I  *  D  S  S  *  Y  I  V  I  *  I  L  *  L  A  F  C  C  S  G  L  S  I  W  H  N  P  S  I  V  E  L  Y  P  W  *  A  S  G  K  I  *  V  H  L  L  *  L  F  T  C  S  C  F  L  E  C  *  N  L  E  R  R  V  K  I  Y  T  S  F  M  *  G  L  E  I  D  Y  G  V  V  I  H  I  I  N  I  S  S  P  L  I  R  *  F  E  </second_frame>
            <third_frame>   F  S  R  S  F  F  S  F  F  R  P  Q  F  P  I  S  I  A  L  F  A  R  A  *  V  S  L  H  K  S  S  N  S  S  T  V  T  A  V  E  S  F  L  V  P  P  T  A  H  S  V  T  S  A  V  L  L  E  S  F  P  L  I  D  L  F  H  L  Q  :  S  *  W  *  S  L  E  N  C  M  D  R  L  C  V  *  N  V  R  C  R  Q  R  I  W  M  F  W  Y  R  L  P  V  T  K  T  W  L  M  *  L  K  S  T  I  E  F  Q  Q  *  R  I  Q  R  *  R  L  G  R  Y  Y  L  Q  *  I  C  R  K  R  T  L  V  R  L  R  Q  C  L  A  L  I  L  L  R  R  A  *  S  P  E  N  S  S  S  S  I  R  L  R  R  M  R  R  R  V  D  C  S  H  Q  L  W  V  T  R  P  G  D  E  Q  T  A  R  S  F  T  I  R  T  V  D  R  Q  A  S  S  L  C  I  T  L  F  L  S  I  A  N  R  K  K  I  P  E  R  *  R  *  L  Q  Y  C  R  R  V  V  Y  I  D  E  T  N  L  L  P  T  H  K  K  G  S  D  K  Q  N  I  H  H  H  I  K  *  Q  K  D  S  F  N  I  I  F  *  C  L  I  Q  I  V  Y  C  L  R  L  L  L  I  Q  L  *  A  R  F  R  I  R  A  D  I  L  L  S  K  F  Y  D  W  R  F  V  A  L  G  C  L  Y  G  T  I  P  P  S  L  S  F  T  H  G  E  Q  V  V  R  S  E  Y  I  Y  Y  S  Y  S  L  V  L  V  F  L  S  V  K  T  *  N  E  G  *  R  Y  I  L  H  L  C  E  G  L  K  *  I  M  G  L  *  S  I  L  *  I  Y  L  H  L  S  L  D  D  L  N </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0246P13.1" strand="+"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="94224" stop="94422"/>
                    <exon start="94490" stop="94932"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>639</number_coding_nucleotides>
                  <number_encoded_amino_acids>213</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KLLFILPTTISDFNCSFRTSMSQSTQIVKFLYSYGGRILPRPSDGTLRYIGGFTRVLSVDRSISFAELMVKFGELYGSSMRLKCKMPTEDLDVLVSITCDEDLANVIEEYDRVSAMTNTEMKIRALLSPINLPKKDSRPSSPMSCFDFAASSLKPGKFVQFNSPPSYAAARRLFSPVVGYPTGRRTDGEELYYPYCGQAGVKPLYNVVPIHCQ*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="+" PGL_start="100873" PGL_stop="103616"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="100873" e_stop="101834"/>
            <exon e_start="101912" e_stop="102035"/>
            <exon e_start="102120" e_stop="102338"/>
            <exon e_start="102429" e_stop="102578"/>
            <exon e_start="102671" e_stop="103186"/>
            <exon e_start="103315" e_stop="103616"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.960" acc_prob="0.977" e_score="1.000"/>
          <exon-intron don_prob="0.885" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.939" acc_prob="0.990" e_score="1.000"/>
          <exon-intron don_prob="0.710" acc_prob="0.981" e_score="0.993"/>
          <exon-intron don_prob="0.975" acc_prob="0.998" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="100873" e_stop="101834" e_length="962"/>
          </exon>
          <intron i_serial="1" don_prob="0.960" acc_prob="0.977">
            <gDNA_intron_boundary i_start="101835" i_stop="101911" i_length="77"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="101912" e_stop="102035" e_length="124"/>
          </exon>
          <intron i_serial="2" don_prob="0.885" acc_prob="0.999">
            <gDNA_intron_boundary i_start="102036" i_stop="102119" i_length="84"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="102120" e_stop="102338" e_length="219"/>
          </exon>
          <intron i_serial="3" don_prob="0.939" acc_prob="0.990">
            <gDNA_intron_boundary i_start="102339" i_stop="102428" i_length="90"/>
          </intron>
          <exon e_serial="4" e_score="0.993">
            <gDNA_exon_boundary e_start="102429" e_stop="102578" e_length="150"/>
          </exon>
          <intron i_serial="4" don_prob="0.710" acc_prob="0.981">
            <gDNA_intron_boundary i_start="102579" i_stop="102670" i_length="92"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="102671" e_stop="103186" e_length="516"/>
          </exon>
          <intron i_serial="5" don_prob="0.975" acc_prob="0.998">
            <gDNA_intron_boundary i_start="103187" i_stop="103314" i_length="128"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="103315" e_stop="103616" e_length="302"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100873" stop="101271"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U344532" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="101245" stop="101834"/>
              <exon start="101912" stop="102035"/>
              <exon start="102120" stop="102338"/>
              <exon start="102429" stop="102578"/>
              <exon start="102671" stop="103186"/>
              <exon start="103315" stop="103616"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U318606" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CTTACACTGACATACATTGATGAGGATGGTGATGTTGTAACACTTGTTGATGACGATGATCTGCAGGATATCACGAGGCAGGACCTGGATCCCCTGCGAATATCTGTGACATTAAACTCTGAAAAACTTAGTATATCTTCAGGTACATCAAGTGGAAATTCTACTTCCGTCAGGGCCCCACCTACATTTCCGAACATAAATTCGAGTGTTTCGGATCTTCTCAAGTCATTGCCAAAGTCAAAAAGCAAAAAAATCCTAAAGCACTCTGCAGATATGGCGTCTAAAGCCTCATCAGCTGCCCGAGAAATTGCTGAGCTTTCCAAAGCTCTCTCTGTGACTAGCTTATCCTACTTAAAGCAGGCTTGTCCAGTATCGGGAGTCCCTATGGGTAGTGTTAAAAGTGGAGAGCCATCTCAAGCAGCGAATCCTGAGGAGCTGACCGTTAAAACTGCAGGACGACCCAAAAGTCATACTGTATCCATAAATGCATCAGAATTGAAATCCTCCCAACCAGATCAAAACGGAATTCAGTGTGAACCATTATCAAAAAGTCCTAAGCGTAACTCATCTCTGGTAGACGGTAAGAAGGAAGAGGGTAACAAATTTGGTGATTCCCATCTTGTTGGGAAGGCTCTTGGTAATTCAGATCCTAGTGCCTCAACCACTGGCCCAAAAAAGACAGCTGATAAACAGCAAACTGAGAATCACCCTGGTGCTGAGCCTGTTGGTGTTGTTGGTTTATCTGGGAAGCTTTCTGGTGGTTTTAGATCCCCAATTTCATATTGGATGCCTATGGTGCCCGTGTCAAATGACACTATCCAACCTCAATACTCTACTTTCCGGATCCCAGTTAAAAGGAGCCATAATCACAGTGATGGGACTGGCTCTATTTTCCACAGAGGCGTTCGCTGTGATGGTTGTGGGGTTCATCCAATAACTGGACCTAGGTTCAAATCTAAAGT : AAAGGAGGACTATGATCTCTGCAGCATATGCTTTGCACAAATGGGAATTGATGCTGATTACGTCAGAATGGATCGTCCTGTTTCTTACCATCATCCCATAGCTTTCAAGGCTTTACATGAACCT : CATGACATCTTTCGAGGCTGCGGTGTAAAATCGCCTAAGCTGGACAGCCGCTTCAAACATGATGTCAATGTACTTGATGGTACTATGATGGCTCCATCGACTCCATTTACCAAGGTCTGGAGGATGAGGAACAATGGTAATATTTTCTGGCCACAAGGAACACAACTTGTTTGGATTGGGGGAGATCGATTAGGTGATGCTGTTTCTGTTGAATTACAG : ATTCCTTCGTTTGGCTTGGCTGTAGACCATGAATTTGATGTGGCAGTTGATTTTAGAGCTCCTAAGCTTCCTGGCAGGTACATCTCCTTCTGGAGGATGGCCTTGCCTTCAGGGGAGAAGTTTGGGCAGCGTGTATGGGTGCTTATCCAG : GTTGATTTTTCAATGATCCCGAAAAAGGAGTTCTCTTATGAAGCCTCTCAGGTCCTGGACTTGAATCTTCCTCCAGCCGGCTATGATATAGCTGGTTCTGAATATATTAATGTGAATGCAGACATGACAATAGAGGATATCATTGCTGACCCTAAAATTTCAAACCCTGCCACTGGATCAGTTGAGCCGGTGGTTGATGGAAACCGTAACAATGAGGAGTTCAAGTCGTGCATTTCTCCTTCTGCAGCTGGTTCGTCAATTTCATACCCCATTGATTTATCCGAGGCAGCACCAGAAGTTACTTCTGTTGCACCACCATCTGTTGTAGAGGTGCAAGCATCTCCACAGGAAGATGTCGAGATGTCCCTCCTCAAGGAACTGGATGACATGGGTTTCACTCAGGTTAACTTAAACAAAGAAGTCTTGAGGATGAACGAGTATAACCTGGAACAATCAGTAGCTGATCTTTGTGGTGTTTCTGAGTGGGATCCTATCCTTGAAGAGCTGGAGGAGATG : GGTTTCCACAACAAAGAGATTAACAAGACGTTGCTCAAGAAGAACAATGGCAGCATTAAGCGTGTTGTGATGGATCTTATTGCCGGAGAGAATTAGAATCTAGTTATCAGTATTTCTTGCAATATATTATGCTTTCAGTAGATTATGCTATCTATAACTTGCTAGACTGAGTTTGATGTTTTGGTGACTGTGTCTTATGTGGTTTTGCACAATTGATAGATGCACTGTAACTTGGATGTTTTGTTGACTTTGTGTCCTTGTGTGGTTTTGCACAATTGATAGATGCACTGAAACTTCTTTAA</gDNA_template>
            <first_frame> L  T  L  T  Y  I  D  E  D  G  D  V  V  T  L  V  D  D  D  D  L  Q  D  I  T  R  Q  D  L  D  P  L  R  I  S  V  T  L  N  S  E  K  L  S  I  S  S  G  T  S  S  G  N  S  T  S  V  R  A  P  P  T  F  P  N  I  N  S  S  V  S  D  L  L  K  S  L  P  K  S  K  S  K  K  I  L  K  H  S  A  D  M  A  S  K  A  S  S  A  A  R  E  I  A  E  L  S  K  A  L  S  V  T  S  L  S  Y  L  K  Q  A  C  P  V  S  G  V  P  M  G  S  V  K  S  G  E  P  S  Q  A  A  N  P  E  E  L  T  V  K  T  A  G  R  P  K  S  H  T  V  S  I  N  A  S  E  L  K  S  S  Q  P  D  Q  N  G  I  Q  C  E  P  L  S  K  S  P  K  R  N  S  S  L  V  D  G  K  K  E  E  G  N  K  F  G  D  S  H  L  V  G  K  A  L  G  N  S  D  P  S  A  S  T  T  G  P  K  K  T  A  D  K  Q  Q  T  E  N  H  P  G  A  E  P  V  G  V  V  G  L  S  G  K  L  S  G  G  F  R  S  P  I  S  Y  W  M  P  M  V  P  V  S  N  D  T  I  Q  P  Q  Y  S  T  F  R  I  P  V  K  R  S  H  N  H  S  D  G  T  G  S  I  F  H  R  G  V  R  C  D  G  C  G  V  H  P  I  T  G  P  R  F  K  S  K  V :   K  E  D  Y  D  L  C  S  I  C  F  A  Q  M  G  I  D  A  D  Y  V  R  M  D  R  P  V  S  Y  H  H  P  I  A  F  K  A  L  H  E  P  :  H  D  I  F  R  G  C  G  V  K  S  P  K  L  D  S  R  F  K  H  D  V  N  V  L  D  G  T  M  M  A  P  S  T  P  F  T  K  V  W  R  M  R  N  N  G  N  I  F  W  P  Q  G  T  Q  L  V  W  I  G  G  D  R  L  G  D  A  V  S  V  E  L  Q  :  I  P  S  F  G  L  A  V  D  H  E  F  D  V  A  V  D  F  R  A  P  K  L  P  G  R  Y  I  S  F  W  R  M  A  L  P  S  G  E  K  F  G  Q  R  V  W  V  L  I  Q  :  V  D  F  S  M  I  P  K  K  E  F  S  Y  E  A  S  Q  V  L  D  L  N  L  P  P  A  G  Y  D  I  A  G  S  E  Y  I  N  V  N  A  D  M  T  I  E  D  I  I  A  D  P  K  I  S  N  P  A  T  G  S  V  E  P  V  V  D  G  N  R  N  N  E  E  F  K  S  C  I  S  P  S  A  A  G  S  S  I  S  Y  P  I  D  L  S  E  A  A  P  E  V  T  S  V  A  P  P  S  V  V  E  V  Q  A  S  P  Q  E  D  V  E  M  S  L  L  K  E  L  D  D  M  G  F  T  Q  V  N  L  N  K  E  V  L  R  M  N  E  Y  N  L  E  Q  S  V  A  D  L  C  G  V  S  E  W  D  P  I  L  E  E  L  E  E  M  :  G  F  H  N  K  E  I  N  K  T  L  L  K  K  N  N  G  S  I  K  R  V  V  M  D  L  I  A  G  E  N  *  N  L  V  I  S  I  S  C  N  I  L  C  F  Q  *  I  M  L  S  I  T  C  *  T  E  F  D  V  L  V  T  V  S  Y  V  V  L  H  N  *  *  M  H  C  N  L  D  V  L  L  T  L  C  P  C  V  V  L  H  N  *  *  M  H  *  N  F  F   </first_frame>
            <second_frame>  L  H  *  H  T  L  M  R  M  V  M  L  *  H  L  L  M  T  M  I  C  R  I  S  R  G  R  T  W  I  P  C  E  Y  L  *  H  *  T  L  K  N  L  V  Y  L  Q  V  H  Q  V  E  I  L  L  P  S  G  P  H  L  H  F  R  T  *  I  R  V  F  R  I  F  S  S  H  C  Q  S  Q  K  A  K  K  S  *  S  T  L  Q  I  W  R  L  K  P  H  Q  L  P  E  K  L  L  S  F  P  K  L  S  L  *  L  A  Y  P  T  *  S  R  L  V  Q  Y  R  E  S  L  W  V  V  L  K  V  E  S  H  L  K  Q  R  I  L  R  S  *  P  L  K  L  Q  D  D  P  K  V  I  L  Y  P  *  M  H  Q  N  *  N  P  P  N  Q  I  K  T  E  F  S  V  N  H  Y  Q  K  V  L  S  V  T  H  L  W  *  T  V  R  R  K  R  V  T  N  L  V  I  P  I  L  L  G  R  L  L  V  I  Q  I  L  V  P  Q  P  L  A  Q  K  R  Q  L  I  N  S  K  L  R  I  T  L  V  L  S  L  L  V  L  L  V  Y  L  G  S  F  L  V  V  L  D  P  Q  F  H  I  G  C  L  W  C  P  C  Q  M  T  L  S  N  L  N  T  L  L  S  G  S  Q  L  K  G  A  I  I  T  V  M  G  L  A  L  F  S  T  E  A  F  A  V  M  V  V  G  F  I  Q  *  L  D  L  G  S  N  L  K   : *  R  R  T  M  I  S  A  A  Y  A  L  H  K  W  E  L  M  L  I  T  S  E  W  I  V  L  F  L  T  I  I  P  *  L  S  R  L  Y  M  N  L :   M  T  S  F  E  A  A  V  *  N  R  L  S  W  T  A  A  S  N  M  M  S  M  Y  L  M  V  L  *  W  L  H  R  L  H  L  P  R  S  G  G  *  G  T  M  V  I  F  S  G  H  K  E  H  N  L  F  G  L  G  E  I  D  *  V  M  L  F  L  L  N  Y  R :   F  L  R  L  A  W  L  *  T  M  N  L  M  W  Q  L  I  L  E  L  L  S  F  L  A  G  T  S  P  S  G  G  W  P  C  L  Q  G  R  S  L  G  S  V  Y  G  C  L  S  R :   L  I  F  Q  *  S  R  K  R  S  S  L  M  K  P  L  R  S  W  T  *  I  F  L  Q  P  A  M  I  *  L  V  L  N  I  L  M  *  M  Q  T  *  Q  *  R  I  S  L  L  T  L  K  F  Q  T  L  P  L  D  Q  L  S  R  W  L  M  E  T  V  T  M  R  S  S  S  R  A  F  L  L  L  Q  L  V  R  Q  F  H  T  P  L  I  Y  P  R  Q  H  Q  K  L  L  L  L  H  H  H  L  L  *  R  C  K  H  L  H  R  K  M  S  R  C  P  S  S  R  N  W  M  T  W  V  S  L  R  L  T  *  T  K  K  S  *  G  *  T  S  I  T  W  N  N  Q  *  L  I  F  V  V  F  L  S  G  I  L  S  L  K  S  W  R  R  W :   V  S  T  T  K  R  L  T  R  R  C  S  R  R  T  M  A  A  L  S  V  L  *  W  I  L  L  P  E  R  I  R  I  *  L  S  V  F  L  A  I  Y  Y  A  F  S  R  L  C  Y  L  *  L  A  R  L  S  L  M  F  W  *  L  C  L  M  W  F  C  T  I  D  R  C  T  V  T  W  M  F  C  *  L  C  V  L  V  W  F  C  T  I  D  R  C  T  E  T  S  L  </second_frame>
            <third_frame>   Y  T  D  I  H  *  *  G  W  *  C  C  N  T  C  *  *  R  *  S  A  G  Y  H  E  A  G  P  G  S  P  A  N  I  C  D  I  K  L  *  K  T  *  Y  I  F  R  Y  I  K  W  K  F  Y  F  R  Q  G  P  T  Y  I  S  E  H  K  F  E  C  F  G  S  S  Q  V  I  A  K  V  K  K  Q  K  N  P  K  A  L  C  R  Y  G  V  *  S  L  I  S  C  P  R  N  C  *  A  F  Q  S  S  L  C  D  *  L  I  L  L  K  A  G  L  S  S  I  G  S  P  Y  G  *  C  *  K  W  R  A  I  S  S  S  E  S  *  G  A  D  R  *  N  C  R  T  T  Q  K  S  Y  C  I  H  K  C  I  R  I  E  I  L  P  T  R  S  K  R  N  S  V  *  T  I  I  K  K  S  *  A  *  L  I  S  G  R  R  *  E  G  R  G  *  Q  I  W  *  F  P  S  C  W  E  G  S  W  *  F  R  S  *  C  L  N  H  W  P  K  K  D  S  *  *  T  A  N  *  E  S  P  W  C  *  A  C  W  C  C  W  F  I  W  E  A  F  W  W  F  *  I  P  N  F  I  L  D  A  Y  G  A  R  V  K  *  H  Y  P  T  S  I  L  Y  F  P  D  P  S  *  K  E  P  *  S  Q  *  W  D  W  L  Y  F  P  Q  R  R  S  L  *  W  L  W  G  S  S  N  N  W  T  *  V  Q  I  *  S  :  K  G  G  L  *  S  L  Q  H  M  L  C  T  N  G  N  *  C  *  L  R  Q  N  G  S  S  C  F  L  P  S  S  H  S  F  Q  G  F  T  *  T   : S  *  H  L  S  R  L  R  C  K  I  A  *  A  G  Q  P  L  Q  T  *  C  Q  C  T  *  W  Y  Y  D  G  S  I  D  S  I  Y  Q  G  L  E  D  E  E  Q  W  *  Y  F  L  A  T  R  N  T  T  C  L  D  W  G  R  S  I  R  *  C  C  F  C  *  I  T   : D  S  F  V  W  L  G  C  R  P  *  I  *  C  G  S  *  F  *  S  S  *  A  S  W  Q  V  H  L  L  L  E  D  G  L  A  F  R  G  E  V  W  A  A  C  M  G  A  Y  P   : G  *  F  F  N  D  P  E  K  G  V  L  L  *  S  L  S  G  P  G  L  E  S  S  S  S  R  L  *  Y  S  W  F  *  I  Y  *  C  E  C  R  H  D  N  R  G  Y  H  C  *  P  *  N  F  K  P  C  H  W  I  S  *  A  G  G  *  W  K  P  *  Q  *  G  V  Q  V  V  H  F  S  F  C  S  W  F  V  N  F  I  P  H  *  F  I  R  G  S  T  R  S  Y  F  C  C  T  T  I  C  C  R  G  A  S  I  S  T  G  R  C  R  D  V  P  P  Q  G  T  G  *  H  G  F  H  S  G  *  L  K  Q  R  S  L  E  D  E  R  V  *  P  G  T  I  S  S  *  S  L  W  C  F  *  V  G  S  Y  P  *  R  A  G  G  D   : G  F  P  Q  Q  R  D  *  Q  D  V  A  Q  E  E  Q  W  Q  H  *  A  C  C  D  G  S  Y  C  R  R  E  L  E  S  S  Y  Q  Y  F  L  Q  Y  I  M  L  S  V  D  Y  A  I  Y  N  L  L  D  *  V  *  C  F  G  D  C  V  L  C  G  F  A  Q  L  I  D  A  L  *  L  G  C  F  V  D  F  V  S  L  C  G  F  A  Q  L  I  D  A  L  K  L  L  * </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0246P13.1" strand="+"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="100873" stop="101834"/>
                    <exon start="101912" stop="102035"/>
                    <exon start="102120" stop="102338"/>
                    <exon start="102429" stop="102578"/>
                    <exon start="102671" stop="103186"/>
                    <exon start="103315" stop="103410"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>2064</number_coding_nucleotides>
                  <number_encoded_amino_acids>688</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LTLTYIDEDGDVVTLVDDDDLQDITRQDLDPLRISVTLNSEKLSISSGTSSGNSTSVRAPPTFPNINSSVSDLLKSLPKSKSKKILKHSADMASKASSAAREIAELSKALSVTSLSYLKQACPVSGVPMGSVKSGEPSQAANPEELTVKTAGRPKSHTVSINASELKSSQPDQNGIQCEPLSKSPKRNSSLVDGKKEEGNKFGDSHLVGKALGNSDPSASTTGPKKTADKQQTENHPGAEPVGVVGLSGKLSGGFRSPISYWMPMVPVSNDTIQPQYSTFRIPVKRSHNHSDGTGSIFHRGVRCDGCGVHPITGPRFKSKVKEDYDLCSICFAQMGIDADYVRMDRPVSYHHPIAFKALHEPHDIFRGCGVKSPKLDSRFKHDVNVLDGTMMAPSTPFTKVWRMRNNGNIFWPQGTQLVWIGGDRLGDAVSVELQIPSFGLAVDHEFDVAVDFRAPKLPGRYISFWRMALPSGEKFGQRVWVLIQVDFSMIPKKEFSYEASQVLDLNLPPAGYDIAGSEYINVNADMTIEDIIADPKISNPATGSVEPVVDGNRNNEEFKSCISPSAAGSSISYPIDLSEAAPEVTSVAPPSVVEVQASPQEDVEMSLLKELDDMGFTQVNLNKEVLRMNEYNLEQSVADLCGVSEWDPILEELEEMGFHNKEINKTLLKKNNGSIKRVVMDLIAGEN*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="+" PGL_start="106354" PGL_stop="108354"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="106354" e_stop="106460"/>
            <exon e_start="106607" e_stop="106684"/>
            <exon e_start="106777" e_stop="107018"/>
            <exon e_start="108072" e_stop="108354"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.962" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.976" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.972" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="106354" e_stop="106460" e_length="107"/>
          </exon>
          <intron i_serial="1" don_prob="0.962" acc_prob="0.994">
            <gDNA_intron_boundary i_start="106461" i_stop="106606" i_length="146"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="106607" e_stop="106684" e_length="78"/>
          </exon>
          <intron i_serial="2" don_prob="0.976" acc_prob="0.000">
            <gDNA_intron_boundary i_start="106685" i_stop="106776" i_length="92"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="106777" e_stop="107018" e_length="242"/>
          </exon>
          <intron i_serial="3" don_prob="1.000" acc_prob="0.972">
            <gDNA_intron_boundary i_start="107019" i_stop="108071" i_length="1053"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="108072" e_stop="108354" e_length="283"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="106354" stop="106460"/>
              <exon start="106607" stop="106684"/>
              <exon start="106777" stop="107018"/>
              <exon start="108072" stop="108354"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U325020" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAGCCATTAGAGCTTGGTTCCCTTGCCCTTTCTGTTATGGCGAAATAGAAGTGCCAATGCTTTGCAGCCATTTGCAAGAAGAACATTGTTTTGACTTAAAAAACGCG : GTCTGTCCCATATGTGCTGCAACTCTGGGCAAAGATCCTACTGGACATTTTTCTGTGCAACATGCACACTCAGTAAAG : AGGAGAAGAAATTACCTAAAACCAGGCTTCTGGAATAATGCAACAGCTATGATCGGAAAGGATCCTCGAGAAATAGCTTCATTTTTTGGCACAGATTCAGTATTTGGTCGATATAAGGTTCAAGAATCTGCTCCTGATCCACTTTTATTGCCATTTCTCTGCAATTTTCCTCCTTCTGATCTGAAATGCAGGCAGCAAGATAAGTCCTCTGTTTGTGATACTGCTATTCCTGAAATAGAAAG : CAGCAAGCTAGCTGTATCTGATCCAGAACTAGAAGAGGATTTTGAAGAGAAAAGGCAGAGAGCTACATTTCTTCAAGAGCTGGTTGCTTCAACTATCTTATAGAAAATCAACCAACTTTTGCTTTCATAAATTAAGCAAGAGACAATCGTTCCAAATTACTAGCAAAAGTCATGTAACACAAGAAAGCATCTCAAAAACTTCTAATATCTATACATCAATGTTACAATTTCAAGTATATTAATGTAATCTCATTTATCCTTGACGACCAACATGTTACTGTTT</gDNA_template>
            <first_frame> K  P  L  E  L  G  S  L  A  L  S  V  M  A  K  *  K  C  Q  C  F  A  A  I  C  K  K  N  I  V  L  T  *  K  T  R :   S  V  P  Y  V  L  Q  L  W  A  K  I  L  L  D  I  F  L  C  N  M  H  T  Q  *  R :   G  E  E  I  T  *  N  Q  A  S  G  I  M  Q  Q  L  *  S  E  R  I  L  E  K  *  L  H  F  L  A  Q  I  Q  Y  L  V  D  I  R  F  K  N  L  L  L  I  H  F  Y  C  H  F  S  A  I  F  L  L  L  I  *  N  A  G  S  K  I  S  P  L  F  V  I  L  L  F  L  K  *  K   : A  A  S  *  L  Y  L  I  Q  N  *  K  R  I  L  K  R  K  G  R  E  L  H  F  F  K  S  W  L  L  Q  L  S  Y  R  K  S  T  N  F  C  F  H  K  L  S  K  R  Q  S  F  Q  I  T  S  K  S  H  V  T  Q  E  S  I  S  K  T  S  N  I  Y  T  S  M  L  Q  F  Q  V  Y  *  C  N  L  I  Y  P  *  R  P  T  C  Y  C   </first_frame>
            <second_frame>  S  H  *  S  L  V  P  L  P  F  L  L  W  R  N  R  S  A  N  A  L  Q  P  F  A  R  R  T  L  F  *  L  K  K  R   : G  L  S  H  M  C  C  N  S  G  Q  R  S  Y  W  T  F  F  C  A  T  C  T  L  S  K   : E  E  K  K  L  P  K  T  R  L  L  E  *  C  N  S  Y  D  R  K  G  S  S  R  N  S  F  I  F  W  H  R  F  S  I  W  S  I  *  G  S  R  I  C  S  *  S  T  F  I  A  I  S  L  Q  F  S  S  F  *  S  E  M  Q  A  A  R  *  V  L  C  L  *  Y  C  Y  S  *  N  R  K  :  Q  Q  A  S  C  I  *  S  R  T  R  R  G  F  *  R  E  K  A  E  S  Y  I  S  S  R  A  G  C  F  N  Y  L  I  E  N  Q  P  T  F  A  F  I  N  *  A  R  D  N  R  S  K  L  L  A  K  V  M  *  H  K  K  A  S  Q  K  L  L  I  S  I  H  Q  C  Y  N  F  K  Y  I  N  V  I  S  F  I  L  D  D  Q  H  V  T  V  </second_frame>
            <third_frame>   A  I  R  A  W  F  P  C  P  F  C  Y  G  E  I  E  V  P  M  L  C  S  H  L  Q  E  E  H  C  F  D  L  K  N  A  :  V  C  P  I  C  A  A  T  L  G  K  D  P  T  G  H  F  S  V  Q  H  A  H  S  V  K  :  R  R  R  N  Y  L  K  P  G  F  W  N  N  A  T  A  M  I  G  K  D  P  R  E  I  A  S  F  F  G  T  D  S  V  F  G  R  Y  K  V  Q  E  S  A  P  D  P  L  L  L  P  F  L  C  N  F  P  P  S  D  L  K  C  R  Q  Q  D  K  S  S  V  C  D  T  A  I  P  E  I  E  S :   S  K  L  A  V  S  D  P  E  L  E  E  D  F  E  E  K  R  Q  R  A  T  F  L  Q  E  L  V  A  S  T  I  L  *  K  I  N  Q  L  L  L  S  *  I  K  Q  E  T  I  V  P  N  Y  *  Q  K  S  C  N  T  R  K  H  L  K  N  F  *  Y  L  Y  I  N  V  T  I  S  S  I  L  M  *  S  H  L  S  L  T  T  N  M  L  L  F </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0246P13.1" strand="+"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="106356" stop="106460"/>
                    <exon start="106607" stop="106684"/>
                    <exon start="106777" stop="107018"/>
                    <exon start="108072" stop="108174"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>525</number_coding_nucleotides>
                  <number_encoded_amino_acids>175</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>AIRAWFPCPFCYGEIEVPMLCSHLQEEHCFDLKNAVCPICAATLGKDPTGHFSVQHAHSVKRRRNYLKPGFWNNATAMIGKDPREIASFFGTDSVFGRYKVQESAPDPLLLPFLCNFPPSDLKCRQQDKSSVCDTAIPEIESSKLAVSDPELEEDFEEKRQRATFLQELVASTIL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="-" PGL_start="107458" PGL_stop="106612"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="107458" e_stop="107124"/>
            <exon e_start="107005" e_stop="106612"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.962" acc_prob="0.890" e_score="1.000"/>
          <exon-only e_score="0.995"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="107458" e_stop="107124" e_length="335"/>
          </exon>
          <intron i_serial="1" don_prob="0.962" acc_prob="0.890">
            <gDNA_intron_boundary i_start="107123" i_stop="107006" i_length="118"/>
          </intron>
          <exon e_serial="2" e_score="0.995">
            <gDNA_exon_boundary e_start="107005" e_stop="106612" e_length="394"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="107458" stop="107124"/>
              <exon start="107005" stop="106612"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U338134" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TATTGCACCAGTTCCGTCAAGAACTTCAAGACATGTCTAGAAGCTCGAGTTCTTTAGATAACCGATTACTGAAAGTAATACATACACCACATAAAGTGTTGAGGAATAAACTCTAAATAGGATAGGCGGATGTAGCCTCTTGGCTATGGCTTCATCTGAACTCATAATTTTAATAGAACAGTAAGTTTAACAATATTGAAGATTGAATCTATAACTCTAAATCCTGAATCTGCCTCTAAACGTGGGTAGGTTTTGGGTTGGGAATTGGTGAAACTACACTCTAGGTGGACACTTTTTGCTGGTTATATTGGCAACGGAAGGACAAATACAGAAAG : GAATAGCAGTATCACAAACAGAGGACTTATCTTGCTGCCTGCATTTCAGATCAGAAGGAGGAAAATTGCAGAGAAATGGCAATAAAAGTGGATCAGGAGCAGATTCTTGAACCTTATATCGACCAAATACTGAATCTGTGCCAAAAAATGAAGCTATTTCTCGAGGATCCTTTCCGATCATAGCTGTTGCATTATTCCAGAAGCCTGGTTTTAGGTAATTTCTTCTCCTCTGTAAAAGGAGTAGGCGTGTGAGGTTCAGCTGATCACTTATAAATCATCCTATATACTCAAAATTAATATTTTTGACGCGGATATGTCTACCTTTACTGAGTGTGCATGTTGCACAGAAAAATGTCCAGTAGGATCTTTGCCCAGAGTTGCAGCACATATGGGA</gDNA_template>
            <first_frame> Y  C  T  S  S  V  K  N  F  K  T  C  L  E  A  R  V  L  *  I  T  D  Y  *  K  *  Y  I  H  H  I  K  C  *  G  I  N  S  K  *  D  R  R  M  *  P  L  G  Y  G  F  I  *  T  H  N  F  N  R  T  V  S  L  T  I  L  K  I  E  S  I  T  L  N  P  E  S  A  S  K  R  G  *  V  L  G  W  E  L  V  K  L  H  S  R  W  T  L  F  A  G  Y  I  G  N  G  R  T  N  T  E  R :   N  S  S  I  T  N  R  G  L  I  L  L  P  A  F  Q  I  R  R  R  K  I  A  E  K  W  Q  *  K  W  I  R  S  R  F  L  N  L  I  S  T  K  Y  *  I  C  A  K  K  *  S  Y  F  S  R  I  L  S  D  H  S  C  C  I  I  P  E  A  W  F  *  V  I  S  S  P  L  *  K  E  *  A  C  E  V  Q  L  I  T  Y  K  S  S  Y  I  L  K  I  N  I  F  D  A  D  M  S  T  F  T  E  C  A  C  C  T  E  K  C  P  V  G  S  L  P  R  V  A  A  H  M  G </first_frame>
            <second_frame>  I  A  P  V  P  S  R  T  S  R  H  V  *  K  L  E  F  F  R  *  P  I  T  E  S  N  T  Y  T  T  *  S  V  E  E  *  T  L  N  R  I  G  G  C  S  L  L  A  M  A  S  S  E  L  I  I  L  I  E  Q  *  V  *  Q  Y  *  R  L  N  L  *  L  *  I  L  N  L  P  L  N  V  G  R  F  W  V  G  N  W  *  N  Y  T  L  G  G  H  F  L  L  V  I  L  A  T  E  G  Q  I  Q  K   : G  I  A  V  S  Q  T  E  D  L  S  C  C  L  H  F  R  S  E  G  G  K  L  Q  R  N  G  N  K  S  G  S  G  A  D  S  *  T  L  Y  R  P  N  T  E  S  V  P  K  N  E  A  I  S  R  G  S  F  P  I  I  A  V  A  L  F  Q  K  P  G  F  R  *  F  L  L  L  C  K  R  S  R  R  V  R  F  S  *  S  L  I  N  H  P  I  Y  S  K  L  I  F  L  T  R  I  C  L  P  L  L  S  V  H  V  A  Q  K  N  V  Q  *  D  L  C  P  E  L  Q  H  I  W   </second_frame>
            <third_frame>   L  H  Q  F  R  Q  E  L  Q  D  M  S  R  S  S  S  S  L  D  N  R  L  L  K  V  I  H  T  P  H  K  V  L  R  N  K  L  *  I  G  *  A  D  V  A  S  W  L  W  L  H  L  N  S  *  F  *  *  N  S  K  F  N  N  I  E  D  *  I  Y  N  S  K  S  *  I  C  L  *  T  W  V  G  F  G  L  G  I  G  E  T  T  L  *  V  D  T  F  C  W  L  Y  W  Q  R  K  D  K  Y  R  K  :  E  *  Q  Y  H  K  Q  R  T  Y  L  A  A  C  I  S  D  Q  K  E  E  N  C  R  E  M  A  I  K  V  D  Q  E  Q  I  L  E  P  Y  I  D  Q  I  L  N  L  C  Q  K  M  K  L  F  L  E  D  P  F  R  S  *  L  L  H  Y  S  R  S  L  V  L  G  N  F  F  S  S  V  K  G  V  G  V  *  G  S  A  D  H  L  *  I  I  L  Y  T  Q  N  *  Y  F  *  R  G  Y  V  Y  L  Y  *  V  C  M  L  H  R  K  M  S  S  R  I  F  A  Q  S  C  S  T  Y  G  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C06HBa0246P13.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="13" PGL_strand="-" PGL_start="112012" PGL_stop="110232"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="112012" e_stop="110232"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.996"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.996">
            <gDNA_exon_boundary e_start="112012" e_stop="110232" e_length="1781"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="112012" stop="110232"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U312391" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GGCTCTCTTTCTCCCTACCAAAAAAAGATAACTTCATTATCCTCTCTTCCTTCTACCACAATTCATTTCACTCTCTTTCTCCAAAATCTTCAATCCTCAGCAAAAGCTTCTTCCATGGCTTCAATTTCAGCAGCTTCTGCAACTGCTGCTGCTGCTGCTTCTACAAAGATTAATACCAGTGGTACTGTTCTTCCTTCAAAATCCTCTAAGCTTATCCTTTCATCTTCTTTTACACCAAACCCATCAACCCTTTTCCTCCATTCACCCGCCACTACTGCACCTTCTTCTTCTTCCTCCCGCCACCGCCGGTTTACTGTCCGAGCTGCGCGTGGTAAATTCGAAAGGAAGAAACCCCATGTCAATATTGGTACAATTGGCCATGTTGACCATGGGAAAACCACACTTACAGCTGCTTTGACAATGGCGCTTGCTTCTCTGGGTAACTCCGCCCCGAAGAAGTATGATGAAATTGATGCTGCCCCTGAAGAAAGGGCTCGTGGTATTACGATTAATACTGCCACAGTGGAGTATGAAACTGAAAATCGGCATTACGCTCATGTGGATTGCCCTGGTCACGCTGATTATGTGAAGAATATGATTACTGGTGCTGCTCAAATGGATGGAGCTATACTTGTTGTTTCAGGAGCTGATGGTCCAATGCCGCAGACTAAGGAACATATTTTGCTTGCTAAGCAAGTGGGTGTCCCTAATATGGTTGTTTTCTTGAACAAAGAGGACCAAGTTGATGATGAAGAGTTGCTTGAGCTTGTTGAGCTGGAGGTAAGAGAGTTATTGTCAAGTTATGAGTTTCCTGGTGATGATATTCCTATTCATTGTGGGTCTGCCCTTTTGGCTTTAGAGGCTTTAATGGCTAATCCTACTATTAAAAGGGGTGATGATCAATGGGTTGATAAGATTTATAAATTGATGGACTCTGTTGATGAATATATTCCTATTCCACAAAGACAAACTGAATTACCTTTCTTGATGGCTATTGAAGATGTGTTTTCTATTACTGGTAGAGGTACAGTGGCTACAGGGAGAGTGGAAAGAGGGACTGTTAAGACAGGGGAAATTGTTGATATAGTTGGATTGAAGGACACTAGGAACACTACAGTAACAGGAGTTGAGATGTTTCAGAAGATATTGGATGAAGCAATGGCAGGAGATAATGTGGGGTTGTTGTTGAGAGGTATTCAAAAGATCGATATTCAAAGAGGAATGGTGTTGGCAAAACCTGGATCAATTACTCCACACACCAAGTTTGAAGCTTTGGTGTATGTGTTGAAGAAGGAAGAGGGTGGCAGGCATTCCCCTTTCTTTGCTGGTTATAGGCCACAGTTTTACATGAGAACAACTGATGTGACCGGAAAGGTTACTGCTATTATGACTGACAAGGGAGAAGAATCTAAGATGGTCATGCCTGGTGATCGCGTAAACATGGTGGTCGAGCTCATTATGCCAGTGGCTTGTGAGCAGGGTATGAGGTTCGCTATTAGGGAAGGAGGAAAGACTGTCGGAGCTGGTGTTATTCAGAAAATCTTAGAATGATGAACTTGCAGCTGAGCATCCCTTTTCACATATGGTCGGATTTTTCCATTGAAGTTTATTAATCCATTGTCATATATGCGACTTTTTGGTTACTTTTGTTATGTCTTAGAATCTTACTTTAGTTGAAGTATCCTGTTTTATCGCCCAATTCTACTGAACTTTTGATAATTTTTCCCGTCTCTTGTTTCACTTATCATTTGCTTGAAAGAAATGATATCATTTGCTCTCAT</gDNA_template>
            <first_frame> G  S  L  S  P  Y  Q  K  K  I  T  S  L  S  S  L  P  S  T  T  I  H  F  T  L  F  L  Q  N  L  Q  S  S  A  K  A  S  S  M  A  S  I  S  A  A  S  A  T  A  A  A  A  A  S  T  K  I  N  T  S  G  T  V  L  P  S  K  S  S  K  L  I  L  S  S  S  F  T  P  N  P  S  T  L  F  L  H  S  P  A  T  T  A  P  S  S  S  S  S  R  H  R  R  F  T  V  R  A  A  R  G  K  F  E  R  K  K  P  H  V  N  I  G  T  I  G  H  V  D  H  G  K  T  T  L  T  A  A  L  T  M  A  L  A  S  L  G  N  S  A  P  K  K  Y  D  E  I  D  A  A  P  E  E  R  A  R  G  I  T  I  N  T  A  T  V  E  Y  E  T  E  N  R  H  Y  A  H  V  D  C  P  G  H  A  D  Y  V  K  N  M  I  T  G  A  A  Q  M  D  G  A  I  L  V  V  S  G  A  D  G  P  M  P  Q  T  K  E  H  I  L  L  A  K  Q  V  G  V  P  N  M  V  V  F  L  N  K  E  D  Q  V  D  D  E  E  L  L  E  L  V  E  L  E  V  R  E  L  L  S  S  Y  E  F  P  G  D  D  I  P  I  H  C  G  S  A  L  L  A  L  E  A  L  M  A  N  P  T  I  K  R  G  D  D  Q  W  V  D  K  I  Y  K  L  M  D  S  V  D  E  Y  I  P  I  P  Q  R  Q  T  E  L  P  F  L  M  A  I  E  D  V  F  S  I  T  G  R  G  T  V  A  T  G  R  V  E  R  G  T  V  K  T  G  E  I  V  D  I  V  G  L  K  D  T  R  N  T  T  V  T  G  V  E  M  F  Q  K  I  L  D  E  A  M  A  G  D  N  V  G  L  L  L  R  G  I  Q  K  I  D  I  Q  R  G  M  V  L  A  K  P  G  S  I  T  P  H  T  K  F  E  A  L  V  Y  V  L  K  K  E  E  G  G  R  H  S  P  F  F  A  G  Y  R  P  Q  F  Y  M  R  T  T  D  V  T  G  K  V  T  A  I  M  T  D  K  G  E  E  S  K  M  V  M  P  G  D  R  V  N  M  V  V  E  L  I  M  P  V  A  C  E  Q  G  M  R  F  A  I  R  E  G  G  K  T  V  G  A  G  V  I  Q  K  I  L  E  *  *  T  C  S  *  A  S  L  F  T  Y  G  R  I  F  P  L  K  F  I  N  P  L  S  Y  M  R  L  F  G  Y  F  C  Y  V  L  E  S  Y  F  S  *  S  I  L  F  Y  R  P  I  L  L  N  F  *  *  F  F  P  S  L  V  S  L  I  I  C  L  K  E  M  I  S  F  A  L   </first_frame>
            <second_frame>  A  L  F  L  P  T  K  K  R  *  L  H  Y  P  L  F  L  L  P  Q  F  I  S  L  S  F  S  K  I  F  N  P  Q  Q  K  L  L  P  W  L  Q  F  Q  Q  L  L  Q  L  L  L  L  L  L  L  Q  R  L  I  P  V  V  L  F  F  L  Q  N  P  L  S  L  S  F  H  L  L  L  H  Q  T  H  Q  P  F  S  S  I  H  P  P  L  L  H  L  L  L  L  P  P  A  T  A  G  L  L  S  E  L  R  V  V  N  S  K  G  R  N  P  M  S  I  L  V  Q  L  A  M  L  T  M  G  K  P  H  L  Q  L  L  *  Q  W  R  L  L  L  W  V  T  P  P  R  R  S  M  M  K  L  M  L  P  L  K  K  G  L  V  V  L  R  L  I  L  P  Q  W  S  M  K  L  K  I  G  I  T  L  M  W  I  A  L  V  T  L  I  M  *  R  I  *  L  L  V  L  L  K  W  M  E  L  Y  L  L  F  Q  E  L  M  V  Q  C  R  R  L  R  N  I  F  C  L  L  S  K  W  V  S  L  I  W  L  F  S  *  T  K  R  T  K  L  M  M  K  S  C  L  S  L  L  S  W  R  *  E  S  Y  C  Q  V  M  S  F  L  V  M  I  F  L  F  I  V  G  L  P  F  W  L  *  R  L  *  W  L  I  L  L  L  K  G  V  M  I  N  G  L  I  R  F  I  N  *  W  T  L  L  M  N  I  F  L  F  H  K  D  K  L  N  Y  L  S  *  W  L  L  K  M  C  F  L  L  L  V  E  V  Q  W  L  Q  G  E  W  K  E  G  L  L  R  Q  G  K  L  L  I  *  L  D  *  R  T  L  G  T  L  Q  *  Q  E  L  R  C  F  R  R  Y  W  M  K  Q  W  Q  E  I  M  W  G  C  C  *  E  V  F  K  R  S  I  F  K  E  E  W  C  W  Q  N  L  D  Q  L  L  H  T  P  S  L  K  L  W  C  M  C  *  R  R  K  R  V  A  G  I  P  L  S  L  L  V  I  G  H  S  F  T  *  E  Q  L  M  *  P  E  R  L  L  L  L  *  L  T  R  E  K  N  L  R  W  S  C  L  V  I  A  *  T  W  W  S  S  S  L  C  Q  W  L  V  S  R  V  *  G  S  L  L  G  K  E  E  R  L  S  E  L  V  L  F  R  K  S  *  N  D  E  L  A  A  E  H  P  F  S  H  M  V  G  F  F  H  *  S  L  L  I  H  C  H  I  C  D  F  L  V  T  F  V  M  S  *  N  L  T  L  V  E  V  S  C  F  I  A  Q  F  Y  *  T  F  D  N  F  S  R  L  L  F  H  L  S  F  A  *  K  K  *  Y  H  L  L  S  </second_frame>
            <third_frame>   L  S  F  S  L  P  K  K  D  N  F  I  I  L  S  S  F  Y  H  N  S  F  H  S  L  S  P  K  S  S  I  L  S  K  S  F  F  H  G  F  N  F  S  S  F  C  N  C  C  C  C  C  F  Y  K  D  *  Y  Q  W  Y  C  S  S  F  K  I  L  *  A  Y  P  F  I  F  F  Y  T  K  P  I  N  P  F  P  P  F  T  R  H  Y  C  T  F  F  F  F  L  P  P  P  P  V  Y  C  P  S  C  A  W  *  I  R  K  E  E  T  P  C  Q  Y  W  Y  N  W  P  C  *  P  W  E  N  H  T  Y  S  C  F  D  N  G  A  C  F  S  G  *  L  R  P  E  E  V  *  *  N  *  C  C  P  *  R  K  G  S  W  Y  Y  D  *  Y  C  H  S  G  V  *  N  *  K  S  A  L  R  S  C  G  L  P  W  S  R  *  L  C  E  E  Y  D  Y  W  C  C  S  N  G  W  S  Y  T  C  C  F  R  S  *  W  S  N  A  A  D  *  G  T  Y  F  A  C  *  A  S  G  C  P  *  Y  G  C  F  L  E  Q  R  G  P  S  *  *  *  R  V  A  *  A  C  *  A  G  G  K  R  V  I  V  K  L  *  V  S  W  *  *  Y  S  Y  S  L  W  V  C  P  F  G  F  R  G  F  N  G  *  S  Y  Y  *  K  G  *  *  S  M  G  *  *  D  L  *  I  D  G  L  C  *  *  I  Y  S  Y  S  T  K  T  N  *  I  T  F  L  D  G  Y  *  R  C  V  F  Y  Y  W  *  R  Y  S  G  Y  R  E  S  G  K  R  D  C  *  D  R  G  N  C  *  Y  S  W  I  E  G  H  *  E  H  Y  S  N  R  S  *  D  V  S  E  D  I  G  *  S  N  G  R  R  *  C  G  V  V  V  E  R  Y  S  K  D  R  Y  S  K  R  N  G  V  G  K  T  W  I  N  Y  S  T  H  Q  V  *  S  F  G  V  C  V  E  E  G  R  G  W  Q  A  F  P  F  L  C  W  L  *  A  T  V  L  H  E  N  N  *  C  D  R  K  G  Y  C  Y  Y  D  *  Q  G  R  R  I  *  D  G  H  A  W  *  S  R  K  H  G  G  R  A  H  Y  A  S  G  L  *  A  G  Y  E  V  R  Y  *  G  R  R  K  D  C  R  S  W  C  Y  S  E  N  L  R  M  M  N  L  Q  L  S  I  P  F  H  I  W  S  D  F  S  I  E  V  Y  *  S  I  V  I  Y  A  T  F  W  L  L  L  L  C  L  R  I  L  L  *  L  K  Y  P  V  L  S  P  N  S  T  E  L  L  I  I  F  P  V  S  C  F  T  Y  H  L  L  E  R  N  D  I  I  C  S  H </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0246P13.1" strand="-"/>
                <serials PGL_serial="13" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="112012" stop="110462"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1548</number_coding_nucleotides>
                  <number_encoded_amino_acids>516</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GSLSPYQKKITSLSSLPSTTIHFTLFLQNLQSSAKASSMASISAASATAAAAASTKINTSGTVLPSKSSKLILSSSFTPNPSTLFLHSPATTAPSSSSSRHRRFTVRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALASLGNSAPKKYDEIDAAPEERARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKEDQVDDEELLELVELEVRELLSSYEFPGDDIPIHCGSALLALEALMANPTIKRGDDQWVDKIYKLMDSVDEYIPIPQRQTELPFLMAIEDVFSITGRGTVATGRVERGTVKTGEIVDIVGLKDTRNTTVTGVEMFQKILDEAMAGDNVGLLLRGIQKIDIQRGMVLAKPGSITPHTKFEALVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGKVTAIMTDKGEESKMVMPGDRVNMVVELIMPVACEQGMRFAIREGGKTVGAGVIQKILE*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="14" PGL_strand="-" PGL_start="119655" PGL_stop="112578"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="119655" e_stop="119577"/>
            <exon e_start="116141" e_stop="116071"/>
            <exon e_start="114358" e_stop="114175"/>
            <exon e_start="114110" e_stop="113973"/>
            <exon e_start="113889" e_stop="112578"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.984" acc_prob="0.968" e_score="1.000"/>
          <exon-intron don_prob="0.981" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.911" acc_prob="0.975" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="119655" e_stop="119577" e_length="79"/>
          </exon>
          <intron i_serial="1" don_prob="0.984" acc_prob="0.968">
            <gDNA_intron_boundary i_start="119576" i_stop="116142" i_length="3435"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="116141" e_stop="116071" e_length="71"/>
          </exon>
          <intron i_serial="2" don_prob="0.981" acc_prob="0.992">
            <gDNA_intron_boundary i_start="116070" i_stop="114359" i_length="1712"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="114358" e_stop="114175" e_length="184"/>
          </exon>
          <intron i_serial="3" don_prob="0.999" acc_prob="0.999">
            <gDNA_intron_boundary i_start="114174" i_stop="114111" i_length="64"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="114110" e_stop="113973" e_length="138"/>
          </exon>
          <intron i_serial="4" don_prob="0.911" acc_prob="0.975">
            <gDNA_intron_boundary i_start="113972" i_stop="113890" i_length="83"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="113889" e_stop="112578" e_length="1312"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="119655" stop="119577"/>
              <exon start="116141" stop="116071"/>
              <exon start="114358" stop="114175"/>
              <exon start="114110" stop="113973"/>
              <exon start="113889" stop="112578"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U325401" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CCTGCTGGAGCTCGTGACATTTGAATATCCTTATATTGAGTGTTCCAACGCTGCTCAAATATATAAGAAAGTGACAGCA : GTATTAAGAAACATGATTTCTATCCCTGATGGAATGCATTCCAGTTGATCAATTAAAATTCAAAATATCAG : GGAATCAAGCCTGCCTCATTGGCAAAAGTGAAGGATCCAAGAGTCAAAGCCTTTATAGAAAAATGTATTGCAAAAGCTTCTGAGCGGTTGCCTGCTAAGAAACTATTGGTTGATCCCTTTCTCCTTTCTGATGAGGATTCTGGAAACGTAGGTCGATCTTTGAGCATCAATTCCAGACATGCAG : ATATGAGTGATGATCAGTCTGATAGTGAAAGGAGTACAAAGGACCCATTGCCTGAAGGAAGCAGAGATTTCACAGTGCAGGGCCAAAGGAAGGACCTAAATACAATATTTCTTAAACTTCGAATTACTGATTCAACAG : GTCATATTAGAAACATTCACTTCCCCTTTGATATTGAAGTTGATACGGCGAATGCTGTTGCTAGTGAAATGGTTGCAGAGCTGGACCTGACAGATCAGGATGTTTCAGCAATAGCAGAAATGATCGATTCAGAAATTCGGTCATATATCCCAGATTGGGCACCAAGAGAAAACTCTAGCAATCACATCACCAATGAAGTTGCTTCTGATAACTTTACTTCTGGAGTCGGAGATGATGCTCCTCCCTTTACAATTGATCCTGCTTATTCGGGTAGTCTTGTGTTGGAAAGACTTCCTTCAGGTCGAAAGTACTGGTCTGTTTCACCGAAAACAACCAGTAATGGCAGCTCTCCACGCAGACAGGGGCCTTCATACACGTCGCTGACCGATTCACCAACTCATGAAGACAGTTGGACGGAAGAATTTGAAGAATCACCTGTTATCCTGAGAGAGGGAGGGAGTTCACATGTTGCTGCCTTACTCGGACACGAAGATTATAAATCTGAGACTCACGTGGATGATGATGCCAGTGTTCACCGTGATTTTGACTTTGGTGACAATGCTCATTCTGCGGATTTTAGTTATGCAAGCAGGCCTCATTCATCAGAGGAAAGAAATAACATGATCAGCAACAACTACTCAGCTGATATCAGACAAATCACCAAGGAACTGGAGAAACTGCGCGGATTGCAGCAAAAGGAGCTAAATGATCTGAAGAAGAAACATGACTCCGCTATCTCAGATCTTCTAAGCAAGCTTCCTCCTGAGATCCGTGGCATTTATGGTCACAAAGTATCTTCCGATAATTTGCATTGCTGATGTCCTGAAAACTCAAGTTCCTCTGTAAAGATGTAAGTTGCTGTTTTGTCTTTTGCTACTCAACTGTTGAGCCATTCTTTGATTGTCCCAATGACCTGACTGTCCCTGAAAAGTCCCAGAGTTGTCCCGGTATGCCGAAATTATTCGCTGTTGCTGACAATTTTCACATCCAAAATTCAAAAGTTCGAGGGGATAATCATGGACCGTATGTTTAGATACAGATTCATTTCTATCAAGTTTAAAATCAGTTCAGGGTCAGGAATTGAGGTAAATCTGAAAGAGGAGACAGAGGAAGCGATGCTTCTGAGATTGTTGGCGACTCCATTTGCTATGTTAGTTATTCGCATTTGCTTGCTTGCACGCTTATGTATAATGCGTCTTGCAAGTCATGTTGCAGCTTAAAACAGGACCTTCAATTTCATTGAATTGTATACTTGTACATATTTACCTGAGTACTTAGCTATTCGAAATGTCACTTGGTTGAAAATATGCAG</gDNA_template>
            <first_frame> P  A  G  A  R  D  I  *  I  S  L  Y  *  V  F  Q  R  C  S  N  I  *  E  S  D  S   : S  I  K  K  H  D  F  Y  P  *  W  N  A  F  Q  L  I  N  *  N  S  K  Y  Q  :  G  I  K  P  A  S  L  A  K  V  K  D  P  R  V  K  A  F  I  E  K  C  I  A  K  A  S  E  R  L  P  A  K  K  L  L  V  D  P  F  L  L  S  D  E  D  S  G  N  V  G  R  S  L  S  I  N  S  R  H  A   : D  M  S  D  D  Q  S  D  S  E  R  S  T  K  D  P  L  P  E  G  S  R  D  F  T  V  Q  G  Q  R  K  D  L  N  T  I  F  L  K  L  R  I  T  D  S  T   : G  H  I  R  N  I  H  F  P  F  D  I  E  V  D  T  A  N  A  V  A  S  E  M  V  A  E  L  D  L  T  D  Q  D  V  S  A  I  A  E  M  I  D  S  E  I  R  S  Y  I  P  D  W  A  P  R  E  N  S  S  N  H  I  T  N  E  V  A  S  D  N  F  T  S  G  V  G  D  D  A  P  P  F  T  I  D  P  A  Y  S  G  S  L  V  L  E  R  L  P  S  G  R  K  Y  W  S  V  S  P  K  T  T  S  N  G  S  S  P  R  R  Q  G  P  S  Y  T  S  L  T  D  S  P  T  H  E  D  S  W  T  E  E  F  E  E  S  P  V  I  L  R  E  G  G  S  S  H  V  A  A  L  L  G  H  E  D  Y  K  S  E  T  H  V  D  D  D  A  S  V  H  R  D  F  D  F  G  D  N  A  H  S  A  D  F  S  Y  A  S  R  P  H  S  S  E  E  R  N  N  M  I  S  N  N  Y  S  A  D  I  R  Q  I  T  K  E  L  E  K  L  R  G  L  Q  Q  K  E  L  N  D  L  K  K  K  H  D  S  A  I  S  D  L  L  S  K  L  P  P  E  I  R  G  I  Y  G  H  K  V  S  S  D  N  L  H  C  *  C  P  E  N  S  S  S  S  V  K  M  *  V  A  V  L  S  F  A  T  Q  L  L  S  H  S  L  I  V  P  M  T  *  L  S  L  K  S  P  R  V  V  P  V  C  R  N  Y  S  L  L  L  T  I  F  T  S  K  I  Q  K  F  E  G  I  I  M  D  R  M  F  R  Y  R  F  I  S  I  K  F  K  I  S  S  G  S  G  I  E  V  N  L  K  E  E  T  E  E  A  M  L  L  R  L  L  A  T  P  F  A  M  L  V  I  R  I  C  L  L  A  R  L  C  I  M  R  L  A  S  H  V  A  A  *  N  R  T  F  N  F  I  E  L  Y  T  C  T  Y  L  P  E  Y  L  A  I  R  N  V  T  W  L  K  I  C   </first_frame>
            <second_frame>  L  L  E  L  V  T  F  E  Y  P  Y  I  E  C  S  N  A  A  Q  I  Y  K  K  V  T  A  :  V  L  R  N  M  I  S  I  P  D  G  M  H  S  S  *  S  I  K  I  Q  N  I  R :   E  S  S  L  P  H  W  Q  K  *  R  I  Q  E  S  K  P  L  *  K  N  V  L  Q  K  L  L  S  G  C  L  L  R  N  Y  W  L  I  P  F  S  F  L  M  R  I  L  E  T  *  V  D  L  *  A  S  I  P  D  M  Q  :  I  *  V  M  I  S  L  I  V  K  G  V  Q  R  T  H  C  L  K  E  A  E  I  S  Q  C  R  A  K  G  R  T  *  I  Q  Y  F  L  N  F  E  L  L  I  Q  Q  :  V  I  L  E  T  F  T  S  P  L  I  L  K  L  I  R  R  M  L  L  L  V  K  W  L  Q  S  W  T  *  Q  I  R  M  F  Q  Q  *  Q  K  *  S  I  Q  K  F  G  H  I  S  Q  I  G  H  Q  E  K  T  L  A  I  T  S  P  M  K  L  L  L  I  T  L  L  L  E  S  E  M  M  L  L  P  L  Q  L  I  L  L  I  R  V  V  L  C  W  K  D  F  L  Q  V  E  S  T  G  L  F  H  R  K  Q  P  V  M  A  A  L  H  A  D  R  G  L  H  T  R  R  *  P  I  H  Q  L  M  K  T  V  G  R  K  N  L  K  N  H  L  L  S  *  E  R  E  G  V  H  M  L  L  P  Y  S  D  T  K  I  I  N  L  R  L  T  W  M  M  M  P  V  F  T  V  I  L  T  L  V  T  M  L  I  L  R  I  L  V  M  Q  A  G  L  I  H  Q  R  K  E  I  T  *  S  A  T  T  T  Q  L  I  S  D  K  S  P  R  N  W  R  N  C  A  D  C  S  K  R  S  *  M  I  *  R  R  N  M  T  P  L  S  Q  I  F  *  A  S  F  L  L  R  S  V  A  F  M  V  T  K  Y  L  P  I  I  C  I  A  D  V  L  K  T  Q  V  P  L  *  R  C  K  L  L  F  C  L  L  L  L  N  C  *  A  I  L  *  L  S  Q  *  P  D  C  P  *  K  V  P  E  L  S  R  Y  A  E  I  I  R  C  C  *  Q  F  S  H  P  K  F  K  S  S  R  G  *  S  W  T  V  C  L  D  T  D  S  F  L  S  S  L  K  S  V  Q  G  Q  E  L  R  *  I  *  K  R  R  Q  R  K  R  C  F  *  D  C  W  R  L  H  L  L  C  *  L  F  A  F  A  C  L  H  A  Y  V  *  C  V  L  Q  V  M  L  Q  L  K  T  G  P  S  I  S  L  N  C  I  L  V  H  I  Y  L  S  T  *  L  F  E  M  S  L  G  *  K  Y  A  </second_frame>
            <third_frame>   C  W  S  S  *  H  L  N  I  L  I  L  S  V  P  T  L  L  K  Y  I  R  K  *  Q  Q :   Y  *  E  T  *  F  L  S  L  M  E  C  I  P  V  D  Q  L  K  F  K  I  S   : G  N  Q  A  C  L  I  G  K  S  E  G  S  K  S  Q  S  L  Y  R  K  M  Y  C  K  S  F  *  A  V  A  C  *  E  T  I  G  *  S  L  S  P  F  *  *  G  F  W  K  R  R  S  I  F  E  H  Q  F  Q  T  C  R :   Y  E  *  *  S  V  *  *  *  K  E  Y  K  G  P  I  A  *  R  K  Q  R  F  H  S  A  G  P  K  E  G  P  K  Y  N  I  S  *  T  S  N  Y  *  F  N  R :   S  Y  *  K  H  S  L  P  L  *  Y  *  S  *  Y  G  E  C  C  C  *  *  N  G  C  R  A  G  P  D  R  S  G  C  F  S  N  S  R  N  D  R  F  R  N  S  V  I  Y  P  R  L  G  T  K  R  K  L  *  Q  S  H  H  Q  *  S  C  F  *  *  L  Y  F  W  S  R  R  *  C  S  S  L  Y  N  *  S  C  L  F  G  *  S  C  V  G  K  T  S  F  R  S  K  V  L  V  C  F  T  E  N  N  Q  *  W  Q  L  S  T  Q  T  G  A  F  I  H  V  A  D  R  F  T  N  S  *  R  Q  L  D  G  R  I  *  R  I  T  C  Y  P  E  R  G  R  E  F  T  C  C  C  L  T  R  T  R  R  L  *  I  *  D  S  R  G  *  *  C  Q  C  S  P  *  F  *  L  W  *  Q  C  S  F  C  G  F  *  L  C  K  Q  A  S  F  I  R  G  K  K  *  H  D  Q  Q  Q  L  L  S  *  Y  Q  T  N  H  Q  G  T  G  E  T  A  R  I  A  A  K  G  A  K  *  S  E  E  E  T  *  L  R  Y  L  R  S  S  K  Q  A  S  S  *  D  P  W  H  L  W  S  Q  S  I  F  R  *  F  A  L  L  M  S  *  K  L  K  F  L  C  K  D  V  S  C  C  F  V  F  C  Y  S  T  V  E  P  F  F  D  C  P  N  D  L  T  V  P  E  K  S  Q  S  C  P  G  M  P  K  L  F  A  V  A  D  N  F  H  I  Q  N  S  K  V  R  G  D  N  H  G  P  Y  V  *  I  Q  I  H  F  Y  Q  V  *  N  Q  F  R  V  R  N  *  G  K  S  E  R  G  D  R  G  S  D  A  S  E  I  V  G  D  S  I  C  Y  V  S  Y  S  H  L  L  A  C  T  L  M  Y  N  A  S  C  K  S  C  C  S  L  K  Q  D  L  Q  F  H  *  I  V  Y  L  Y  I  F  T  *  V  L  S  Y  S  K  C  H  L  V  E  N  M  Q </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0246P13.1" strand="-"/>
                <serials PGL_serial="14" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="116085" stop="116071"/>
                    <exon start="114358" stop="114175"/>
                    <exon start="114110" stop="113973"/>
                    <exon start="113889" stop="113072"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1152</number_coding_nucleotides>
                  <number_encoded_amino_acids>384</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NSKYQGIKPASLAKVKDPRVKAFIEKCIAKASERLPAKKLLVDPFLLSDEDSGNVGRSLSINSRHADMSDDQSDSERSTKDPLPEGSRDFTVQGQRKDLNTIFLKLRITDSTGHIRNIHFPFDIEVDTANAVASEMVAELDLTDQDVSAIAEMIDSEIRSYIPDWAPRENSSNHITNEVASDNFTSGVGDDAPPFTIDPAYSGSLVLERLPSGRKYWSVSPKTTSNGSSPRRQGPSYTSLTDSPTHEDSWTEEFEESPVILREGGSSHVAALLGHEDYKSETHVDDDASVHRDFDFGDNAHSADFSYASRPHSSEERNNMISNNYSADIRQITKELEKLRGLQQKELNDLKKKHDSAISDLLSKLPPEIRGIYGHKVSSDNLHC*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0246P13.1" strand="-"/>
                <serials PGL_serial="14" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="112972" stop="112670"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>300</number_coding_nucleotides>
                  <number_encoded_amino_acids>100</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LSLKSPRVVPVCRNYSLLLTIFTSKIQKFEGIIMDRMFRYRFISIKFKISSGSGIEVNLKEETEEAMLLRLLATPFAMLVIRICLLARLCIMRLASHVAA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 32 chains have been computed
$ 
$ memory statistics:
$ 28936 bytes spliced alignments in total
$ 15 spliced alignments have been stored
$ 1929 bytes was the average size of a spliced alignment
$ 21520 bytes predicted gene locations in total
$ 14 predicted gene locations have been stored
$ 1537 bytes was the average size of a predicted gene location
$ 5 megabytes was the average size of the backtrace matrix
$ 37 backtrace matrices have been allocated
$ 
$ date finished: 2009-01-16 08:53:32
-->
