##gff-version 3
##sequence-region C06HBa0288L16.1 1 113175
C06HBa0288L16.1	GenomeThreader_SGN_U_tomato	match	9910	17209	0.995	+	0	ID=SGN-U322839_alignment_1;Target=SGN-U322839 1 1354 +
C06HBa0288L16.1	GenomeThreader_SGN_U_tomato	match_part	9910	9977	0.985	+	0	ID=GTH_SGN_U_tom_match_part_1;Target=SGN-U322839 1 68 +;Parent=SGN-U322839_alignment_1
C06HBa0288L16.1	GenomeThreader_SGN_U_tomato	match_part	10065	10315	1.000	+	0	ID=GTH_SGN_U_tom_match_part_2;Target=SGN-U322839 69 319 +;Parent=SGN-U322839_alignment_1
C06HBa0288L16.1	GenomeThreader_SGN_U_tomato	match_part	11615	11660	1.000	+	0	ID=GTH_SGN_U_tom_match_part_3;Target=SGN-U322839 320 365 +;Parent=SGN-U322839_alignment_1
C06HBa0288L16.1	GenomeThreader_SGN_U_tomato	match_part	11742	11990	1.000	+	0	ID=GTH_SGN_U_tom_match_part_4;Target=SGN-U322839 366 614 +;Parent=SGN-U322839_alignment_1
C06HBa0288L16.1	GenomeThreader_SGN_U_tomato	match_part	12408	12638	1.000	+	0	ID=GTH_SGN_U_tom_match_part_5;Target=SGN-U322839 615 845 +;Parent=SGN-U322839_alignment_1
C06HBa0288L16.1	GenomeThreader_SGN_U_tomato	match_part	14220	14311	1.000	+	0	ID=GTH_SGN_U_tom_match_part_6;Target=SGN-U322839 846 937 +;Parent=SGN-U322839_alignment_1
C06HBa0288L16.1	GenomeThreader_SGN_U_tomato	match_part	15780	16008	1.000	+	0	ID=GTH_SGN_U_tom_match_part_7;Target=SGN-U322839 938 1166 +;Parent=SGN-U322839_alignment_1
C06HBa0288L16.1	GenomeThreader_SGN_U_tomato	match_part	17022	17209	0.968	+	0	ID=GTH_SGN_U_tom_match_part_8;Target=SGN-U322839 1167 1354 +;Parent=SGN-U322839_alignment_1
C06HBa0288L16.1	GenomeThreader_SGN_U_tomato	match	17233	18123	0.997	+	0	ID=SGN-U322652_alignment_1;Target=SGN-U322652 1 694 +
C06HBa0288L16.1	GenomeThreader_SGN_U_tomato	match_part	17233	17378	1.000	+	0	ID=GTH_SGN_U_tom_match_part_9;Target=SGN-U322652 1 146 +;Parent=SGN-U322652_alignment_1
C06HBa0288L16.1	GenomeThreader_SGN_U_tomato	match_part	17476	17549	1.000	+	0	ID=GTH_SGN_U_tom_match_part_10;Target=SGN-U322652 147 220 +;Parent=SGN-U322652_alignment_1
C06HBa0288L16.1	GenomeThreader_SGN_U_tomato	match_part	17650	18123	0.996	+	0	ID=GTH_SGN_U_tom_match_part_11;Target=SGN-U322652 221 694 +;Parent=SGN-U322652_alignment_1
C06HBa0288L16.1	GenomeThreader_SGN_U_tomato	match	18568	18929	1.000	+	0	ID=SGN-U344343_alignment_1;Target=SGN-U344343 1 362 +
C06HBa0288L16.1	GenomeThreader_SGN_U_tomato	match_part	18568	18929	1.000	+	0	ID=GTH_SGN_U_tom_match_part_12;Target=SGN-U344343 1 362 +;Parent=SGN-U344343_alignment_1
C06HBa0288L16.1	GenomeThreader_SGN_U_tomato	match	19294	23745	0.995	+	0	ID=SGN-U319722_alignment_1;Target=SGN-U319722 1 1971 +
C06HBa0288L16.1	GenomeThreader_SGN_U_tomato	match_part	19294	20479	0.999	+	0	ID=GTH_SGN_U_tom_match_part_13;Target=SGN-U319722 1 1186 +;Parent=SGN-U319722_alignment_1
C06HBa0288L16.1	GenomeThreader_SGN_U_tomato	match_part	21912	22128	1.000	+	0	ID=GTH_SGN_U_tom_match_part_14;Target=SGN-U319722 1187 1403 +;Parent=SGN-U319722_alignment_1
C06HBa0288L16.1	GenomeThreader_SGN_U_tomato	match_part	23086	23270	1.000	+	0	ID=GTH_SGN_U_tom_match_part_15;Target=SGN-U319722 1404 1588 +;Parent=SGN-U319722_alignment_1
C06HBa0288L16.1	GenomeThreader_SGN_U_tomato	match_part	23363	23745	0.979	+	0	ID=GTH_SGN_U_tom_match_part_16;Target=SGN-U319722 1589 1971 +;Parent=SGN-U319722_alignment_1
C06HBa0288L16.1	GenomeThreader_SGN_U_tomato	match	22769	23405	1.000	+	0	ID=SGN-U336908_alignment_1;Target=SGN-U336908 1 545 +
C06HBa0288L16.1	GenomeThreader_SGN_U_tomato	match_part	22769	23270	1.000	+	0	ID=GTH_SGN_U_tom_match_part_17;Target=SGN-U336908 1 502 +;Parent=SGN-U336908_alignment_1
C06HBa0288L16.1	GenomeThreader_SGN_U_tomato	match_part	23363	23405	1.000	+	0	ID=GTH_SGN_U_tom_match_part_18;Target=SGN-U336908 503 545 +;Parent=SGN-U336908_alignment_1
C06HBa0288L16.1	GenomeThreader_SGN_U_tomato	match	26608	34004	1.000	-	0	ID=SGN-U324239_alignment_1;Target=SGN-U324239 1 736 +
C06HBa0288L16.1	GenomeThreader_SGN_U_tomato	match_part	33820	34004	1.000	-	0	ID=GTH_SGN_U_tom_match_part_19;Target=SGN-U324239 1 185 +;Parent=SGN-U324239_alignment_1
C06HBa0288L16.1	GenomeThreader_SGN_U_tomato	match_part	33205	33270	1.000	-	0	ID=GTH_SGN_U_tom_match_part_20;Target=SGN-U324239 186 251 +;Parent=SGN-U324239_alignment_1
C06HBa0288L16.1	GenomeThreader_SGN_U_tomato	match_part	32050	32136	1.000	-	0	ID=GTH_SGN_U_tom_match_part_21;Target=SGN-U324239 252 338 +;Parent=SGN-U324239_alignment_1
C06HBa0288L16.1	GenomeThreader_SGN_U_tomato	match_part	27691	27747	1.000	-	0	ID=GTH_SGN_U_tom_match_part_22;Target=SGN-U324239 339 395 +;Parent=SGN-U324239_alignment_1
C06HBa0288L16.1	GenomeThreader_SGN_U_tomato	match_part	27476	27540	1.000	-	0	ID=GTH_SGN_U_tom_match_part_23;Target=SGN-U324239 396 460 +;Parent=SGN-U324239_alignment_1
C06HBa0288L16.1	GenomeThreader_SGN_U_tomato	match_part	27104	27273	1.000	-	0	ID=GTH_SGN_U_tom_match_part_24;Target=SGN-U324239 461 630 +;Parent=SGN-U324239_alignment_1
C06HBa0288L16.1	GenomeThreader_SGN_U_tomato	match_part	26820	26881	1.000	-	0	ID=GTH_SGN_U_tom_match_part_25;Target=SGN-U324239 631 692 +;Parent=SGN-U324239_alignment_1
C06HBa0288L16.1	GenomeThreader_SGN_U_tomato	match_part	26608	26652	0.956	-	0	ID=GTH_SGN_U_tom_match_part_26;Target=SGN-U324239 693 736 +;Parent=SGN-U324239_alignment_1
C06HBa0288L16.1	GenomeThreader_SGN_U_tomato	match	35611	36774	0.945	-	0	ID=SGN-U324553_alignment_1;Target=SGN-U324553 1 1190 +
C06HBa0288L16.1	GenomeThreader_SGN_U_tomato	match_part	35611	36774	0.945	-	0	ID=GTH_SGN_U_tom_match_part_27;Target=SGN-U324553 1 1190 +;Parent=SGN-U324553_alignment_1
C06HBa0288L16.1	GenomeThreader_SGN_U_tomato	match	40558	41273	0.997	-	0	ID=SGN-U324552_alignment_1;Target=SGN-U324552 1 716 +
C06HBa0288L16.1	GenomeThreader_SGN_U_tomato	match_part	40558	41273	0.997	-	0	ID=GTH_SGN_U_tom_match_part_28;Target=SGN-U324552 1 716 +;Parent=SGN-U324552_alignment_1
C06HBa0288L16.1	GenomeThreader_SGN_U_tomato	match	85356	85871	0.990	-	0	ID=SGN-U328315_alignment_1;Target=SGN-U328315 1 516 +
C06HBa0288L16.1	GenomeThreader_SGN_U_tomato	match_part	85356	85871	0.990	-	0	ID=GTH_SGN_U_tom_match_part_29;Target=SGN-U328315 1 516 +;Parent=SGN-U328315_alignment_1
C06HBa0288L16.1	GenomeThreader_SGN_U_tomato	match	87893	88627	0.988	-	0	ID=SGN-U315549_alignment_1;Target=SGN-U315549 1 733 -
C06HBa0288L16.1	GenomeThreader_SGN_U_tomato	match_part	87893	88627	0.988	-	0	ID=GTH_SGN_U_tom_match_part_30;Target=SGN-U315549 1 733 -;Parent=SGN-U315549_alignment_1
C06HBa0288L16.1	GenomeThreader_SGN_U_tomato	match	87914	88264	0.972	+	0	ID=SGN-U335204_alignment_1;Target=SGN-U335204 1 351 +
C06HBa0288L16.1	GenomeThreader_SGN_U_tomato	match_part	87914	88264	0.972	+	0	ID=GTH_SGN_U_tom_match_part_31;Target=SGN-U335204 1 351 +;Parent=SGN-U335204_alignment_1
C06HBa0288L16.1	GenomeThreader_SGN_U_tomato	gene	9910	17209	.	+	0	ID=GTH_SGN_U_tom_gene_1
C06HBa0288L16.1	GenomeThreader_SGN_U_tomato	mRNA	9910	17209	.	+	0	ID=GTH_SGN_U_tom_gene_1_AGS_1;Parent=GTH_SGN_U_tom_gene_1
C06HBa0288L16.1	GenomeThreader_SGN_U_tomato	exon	9910	9977	0.985	+	0	ID=GTH_SGN_U_tom_exon_1;Parent=GTH_SGN_U_tom_gene_1_AGS_1
C06HBa0288L16.1	GenomeThreader_SGN_U_tomato	exon	10065	10315	1.000	+	0	ID=GTH_SGN_U_tom_exon_2;Parent=GTH_SGN_U_tom_gene_1_AGS_1
C06HBa0288L16.1	GenomeThreader_SGN_U_tomato	exon	11615	11660	1.000	+	0	ID=GTH_SGN_U_tom_exon_3;Parent=GTH_SGN_U_tom_gene_1_AGS_1
C06HBa0288L16.1	GenomeThreader_SGN_U_tomato	exon	11742	11990	1.000	+	0	ID=GTH_SGN_U_tom_exon_4;Parent=GTH_SGN_U_tom_gene_1_AGS_1
C06HBa0288L16.1	GenomeThreader_SGN_U_tomato	exon	12408	12638	1.000	+	0	ID=GTH_SGN_U_tom_exon_5;Parent=GTH_SGN_U_tom_gene_1_AGS_1
C06HBa0288L16.1	GenomeThreader_SGN_U_tomato	exon	14220	14311	1.000	+	0	ID=GTH_SGN_U_tom_exon_6;Parent=GTH_SGN_U_tom_gene_1_AGS_1
C06HBa0288L16.1	GenomeThreader_SGN_U_tomato	exon	15780	16008	1.000	+	0	ID=GTH_SGN_U_tom_exon_7;Parent=GTH_SGN_U_tom_gene_1_AGS_1
C06HBa0288L16.1	GenomeThreader_SGN_U_tomato	exon	17022	17209	0.968	+	0	ID=GTH_SGN_U_tom_exon_8;Parent=GTH_SGN_U_tom_gene_1_AGS_1
C06HBa0288L16.1	GenomeThreader_SGN_U_tomato	gene	17233	18123	.	+	0	ID=GTH_SGN_U_tom_gene_2
C06HBa0288L16.1	GenomeThreader_SGN_U_tomato	mRNA	17233	18123	.	+	0	ID=GTH_SGN_U_tom_gene_2_AGS_1;Parent=GTH_SGN_U_tom_gene_2
C06HBa0288L16.1	GenomeThreader_SGN_U_tomato	exon	17233	17378	1.000	+	0	ID=GTH_SGN_U_tom_exon_9;Parent=GTH_SGN_U_tom_gene_2_AGS_1
C06HBa0288L16.1	GenomeThreader_SGN_U_tomato	exon	17476	17549	1.000	+	0	ID=GTH_SGN_U_tom_exon_10;Parent=GTH_SGN_U_tom_gene_2_AGS_1
C06HBa0288L16.1	GenomeThreader_SGN_U_tomato	exon	17650	18123	0.996	+	0	ID=GTH_SGN_U_tom_exon_11;Parent=GTH_SGN_U_tom_gene_2_AGS_1
C06HBa0288L16.1	GenomeThreader_SGN_U_tomato	gene	18568	18929	.	+	0	ID=GTH_SGN_U_tom_gene_3
C06HBa0288L16.1	GenomeThreader_SGN_U_tomato	mRNA	18568	18929	.	+	0	ID=GTH_SGN_U_tom_gene_3_AGS_1;Parent=GTH_SGN_U_tom_gene_3
C06HBa0288L16.1	GenomeThreader_SGN_U_tomato	exon	18568	18929	1.000	+	0	ID=GTH_SGN_U_tom_exon_12;Parent=GTH_SGN_U_tom_gene_3_AGS_1
C06HBa0288L16.1	GenomeThreader_SGN_U_tomato	gene	19294	23745	.	+	0	ID=GTH_SGN_U_tom_gene_4
C06HBa0288L16.1	GenomeThreader_SGN_U_tomato	mRNA	19294	23745	.	+	0	ID=GTH_SGN_U_tom_gene_4_AGS_1;Parent=GTH_SGN_U_tom_gene_4
C06HBa0288L16.1	GenomeThreader_SGN_U_tomato	exon	19294	20479	0.999	+	0	ID=GTH_SGN_U_tom_exon_13;Parent=GTH_SGN_U_tom_gene_4_AGS_1
C06HBa0288L16.1	GenomeThreader_SGN_U_tomato	exon	21912	22128	1.000	+	0	ID=GTH_SGN_U_tom_exon_14;Parent=GTH_SGN_U_tom_gene_4_AGS_1
C06HBa0288L16.1	GenomeThreader_SGN_U_tomato	exon	23086	23270	1.000	+	0	ID=GTH_SGN_U_tom_exon_15;Parent=GTH_SGN_U_tom_gene_4_AGS_1
C06HBa0288L16.1	GenomeThreader_SGN_U_tomato	exon	23363	23745	0.979	+	0	ID=GTH_SGN_U_tom_exon_16;Parent=GTH_SGN_U_tom_gene_4_AGS_1
C06HBa0288L16.1	GenomeThreader_SGN_U_tomato	mRNA	22769	23405	.	+	0	ID=GTH_SGN_U_tom_gene_4_AGS_2;Parent=GTH_SGN_U_tom_gene_4
C06HBa0288L16.1	GenomeThreader_SGN_U_tomato	exon	22769	23270	1.000	+	0	ID=GTH_SGN_U_tom_exon_17;Parent=GTH_SGN_U_tom_gene_4_AGS_2
C06HBa0288L16.1	GenomeThreader_SGN_U_tomato	exon	23363	23405	1.000	+	0	ID=GTH_SGN_U_tom_exon_18;Parent=GTH_SGN_U_tom_gene_4_AGS_2
C06HBa0288L16.1	GenomeThreader_SGN_U_tomato	gene	26608	34004	.	-	0	ID=GTH_SGN_U_tom_gene_5
C06HBa0288L16.1	GenomeThreader_SGN_U_tomato	mRNA	26608	34004	.	-	0	ID=GTH_SGN_U_tom_gene_5_AGS_1;Parent=GTH_SGN_U_tom_gene_5
C06HBa0288L16.1	GenomeThreader_SGN_U_tomato	exon	33820	34004	1.000	-	0	ID=GTH_SGN_U_tom_exon_19;Parent=GTH_SGN_U_tom_gene_5_AGS_1
C06HBa0288L16.1	GenomeThreader_SGN_U_tomato	exon	33205	33270	1.000	-	0	ID=GTH_SGN_U_tom_exon_20;Parent=GTH_SGN_U_tom_gene_5_AGS_1
C06HBa0288L16.1	GenomeThreader_SGN_U_tomato	exon	32050	32136	1.000	-	0	ID=GTH_SGN_U_tom_exon_21;Parent=GTH_SGN_U_tom_gene_5_AGS_1
C06HBa0288L16.1	GenomeThreader_SGN_U_tomato	exon	27691	27747	1.000	-	0	ID=GTH_SGN_U_tom_exon_22;Parent=GTH_SGN_U_tom_gene_5_AGS_1
C06HBa0288L16.1	GenomeThreader_SGN_U_tomato	exon	27476	27540	1.000	-	0	ID=GTH_SGN_U_tom_exon_23;Parent=GTH_SGN_U_tom_gene_5_AGS_1
C06HBa0288L16.1	GenomeThreader_SGN_U_tomato	exon	27104	27273	1.000	-	0	ID=GTH_SGN_U_tom_exon_24;Parent=GTH_SGN_U_tom_gene_5_AGS_1
C06HBa0288L16.1	GenomeThreader_SGN_U_tomato	exon	26820	26881	1.000	-	0	ID=GTH_SGN_U_tom_exon_25;Parent=GTH_SGN_U_tom_gene_5_AGS_1
C06HBa0288L16.1	GenomeThreader_SGN_U_tomato	exon	26608	26652	0.956	-	0	ID=GTH_SGN_U_tom_exon_26;Parent=GTH_SGN_U_tom_gene_5_AGS_1
C06HBa0288L16.1	GenomeThreader_SGN_U_tomato	gene	35611	36774	.	-	0	ID=GTH_SGN_U_tom_gene_6
C06HBa0288L16.1	GenomeThreader_SGN_U_tomato	mRNA	35611	36774	.	-	0	ID=GTH_SGN_U_tom_gene_6_AGS_1;Parent=GTH_SGN_U_tom_gene_6
C06HBa0288L16.1	GenomeThreader_SGN_U_tomato	exon	35611	36774	0.945	-	0	ID=GTH_SGN_U_tom_exon_27;Parent=GTH_SGN_U_tom_gene_6_AGS_1
C06HBa0288L16.1	GenomeThreader_SGN_U_tomato	gene	40558	41273	.	-	0	ID=GTH_SGN_U_tom_gene_7
C06HBa0288L16.1	GenomeThreader_SGN_U_tomato	mRNA	40558	41273	.	-	0	ID=GTH_SGN_U_tom_gene_7_AGS_1;Parent=GTH_SGN_U_tom_gene_7
C06HBa0288L16.1	GenomeThreader_SGN_U_tomato	exon	40558	41273	0.997	-	0	ID=GTH_SGN_U_tom_exon_28;Parent=GTH_SGN_U_tom_gene_7_AGS_1
C06HBa0288L16.1	GenomeThreader_SGN_U_tomato	gene	85356	85871	.	-	0	ID=GTH_SGN_U_tom_gene_8
C06HBa0288L16.1	GenomeThreader_SGN_U_tomato	mRNA	85356	85871	.	-	0	ID=GTH_SGN_U_tom_gene_8_AGS_1;Parent=GTH_SGN_U_tom_gene_8
C06HBa0288L16.1	GenomeThreader_SGN_U_tomato	exon	85356	85871	0.990	-	0	ID=GTH_SGN_U_tom_exon_29;Parent=GTH_SGN_U_tom_gene_8_AGS_1
C06HBa0288L16.1	GenomeThreader_SGN_U_tomato	gene	87893	88627	.	-	0	ID=GTH_SGN_U_tom_gene_9
C06HBa0288L16.1	GenomeThreader_SGN_U_tomato	mRNA	87893	88627	.	-	0	ID=GTH_SGN_U_tom_gene_9_AGS_1;Parent=GTH_SGN_U_tom_gene_9
C06HBa0288L16.1	GenomeThreader_SGN_U_tomato	exon	87893	88627	0.988	-	0	ID=GTH_SGN_U_tom_exon_30;Parent=GTH_SGN_U_tom_gene_9_AGS_1
C06HBa0288L16.1	GenomeThreader_SGN_U_tomato	gene	87914	88264	.	+	0	ID=GTH_SGN_U_tom_gene_10
C06HBa0288L16.1	GenomeThreader_SGN_U_tomato	mRNA	87914	88264	.	+	0	ID=GTH_SGN_U_tom_gene_10_AGS_1;Parent=GTH_SGN_U_tom_gene_10
C06HBa0288L16.1	GenomeThreader_SGN_U_tomato	exon	87914	88264	0.972	+	0	ID=GTH_SGN_U_tom_exon_31;Parent=GTH_SGN_U_tom_gene_10_AGS_1