<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-01-16 20:48:47"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C06SLe0039G15-FcnBD/GenomeThreader_SGN_E_tomato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C06SLe0039G15-FcnBD/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLe0039G15-FcnBD/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E691913" ref_strand="+" ref_description="SGN-E691913 [LH_Ea07F15]">
      <seq>cctgttaatctttttataaacaatccaaattttcccctaaccccgattccactctcaattgtcttcttcctcattttcctatttaacaaaactcaatttctcatttccaattcctcaaactgaattttgatcatagagattatcgattatcgagttgagttcaaaatttcgattcaccggagctatgtcactgaggcccaactcgagaacggaggctcgccggagcaggtacaaagttgccgtatatgccgaggaaggacggacaagaagggaagataacatggttgagatccggaagaataaaacataacaaaatttgcttaataagcgtcccgaaggtttactacaagctcagcagtttcctagcactgctgctgtttctcaccttgataagaagctggagactcttcctgaattgattgctggagtttggtctgatgacagcattttgcaacttgaatgtacaacacaattccggaaactgctttcaattgaacgcaatcctcctatacaggaagtgatacaatctggggaacttcctcgctttgttgaatatcttgctcgagatgactatcatcaactgcagtttgaggcagcgtgggctcttacaaatattgcgtctggtacatcataaaacactaaagctgcgatagattatggttctgtcccaattttcatcacacttctaagttcaccaagcgatgatgtccgtgaacaagcagattgggctttgggaaatattgctggtgactcgcccaagtatcgtgaccttgtgcttggcca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLe0039G15-FcnBD/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C06SLe0039G15.1" temp_strand="+" temp_description="C06SLe0039G15.1  AC216657.1 htgs_phase:1 submitted_to_sgn_as:C06SLe0039G15 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="15600" stop="19547"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15898" g_stop="16294" g_length="397"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="397" r_length="397" r_score="0.940"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16295" i_stop="18369" i_length="2075">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.971" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18370" g_stop="18466" g_length="97"/>
          <reference_exon_boundary r_type="cDNA" r_start="398" r_stop="494" r_length="97" r_score="0.979"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="18467" i_stop="18590" i_length="124">
            <donor d_prob="0.851" d_score="0.98"/>
            <acceptor a_prob="0.998" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="18591" g_stop="18682" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="495" r_stop="586" r_length="92" r_score="0.935"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="18683" i_stop="18772" i_length="90">
            <donor d_prob="1.000" d_score="0.96"/>
            <acceptor a_prob="0.967" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="18773" g_stop="18904" g_length="132"/>
          <reference_exon_boundary r_type="cDNA" r_start="587" r_stop="718" r_length="132" r_score="0.939"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="18905" i_stop="19182" i_length="278">
            <donor d_prob="0.995" d_score="0.94"/>
            <acceptor a_prob="0.999" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="19183" g_stop="19247" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="719" r_stop="783" r_length="65" r_score="0.969"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLe0039G15.1" gen_strand="+" ref_id="SGN-E691913" ref_strand="+">
        <total_alignment_score>0.946</total_alignment_score>
        <cumulative_length_of_scored_exons>783</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLe0039G15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E691913" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15898" e_stop="16294"/>
          <exon e_start="18370" e_stop="18466"/>
          <exon e_start="18591" e_stop="18682"/>
          <exon e_start="18773" e_stop="18904"/>
          <exon e_start="19183" e_stop="19247"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTTTTTTCTTTTTAGAAACAATCCAAATTTTCCCCAAACCCTGATTCCACTCTCAATTGTCTTCTTCCTCATTTTCCTATTTAACAAAACTCAATTTCGCATTTCGAATTCCTCAAACTGAATTTTGTTCATAGAGATTATCGATTATCGAGTTGAGTTCAGAATTTCGATTCACCGGAGCTATGTCACTGAGGCCGAACTCGAGAACGGAGGCTCGCCGGAGCAGGTACAAAGTTGCCGTCGATGCGGAGGAAGGACGGAGAAGAAGGGAAGATAACATGGTTGAGATCCGGAAGAATAAAAGAGAAGAGAATTTGCTTAAGAAGCGTCGTGAAGGTTTACTACAAGCTCAGCAGTTTCCTAGCACTGCTGCTGTTTCTCACCTTGATAAGAAGGTATAGATTTTTTTCGTTGATTAACTTTTAGTTTCTTAGATACATATATTTTGATCGAATTTGATTGTCTGATTTGAATTTTCAAGTGCGATCAATGTTTACTCAGTGTGTGTCCTTGTGAGCTTAATTCGTTACTTCGATTTTTTCGTTTAGTTACTTGCTTCATTCAGTTCTAAACCTCAATTATGCTTAATTGATTCAATTATTTGTTTGAAGTTCAAGTGTGATCACTGTTTACTCGGTTTTCTCTTTTACGAGCTTAGTTCAGTACTTCGTATTTTTTGTTATTTAAATGCTTAATTTAGTTCTTAGATTCACTTATGCTTATTGAAATCAATTATTTGATTGAAATGCAAGTGCGTCAATGTTTACTCTCGGTGTTCGTCCTATCTAAGATAATCGGCTACTTGTATTTTTCGTTATTTAAATGCTTCATTCAGTTCTTACCTTTGCTTATCCTCATTGGATTCAATTGTTTTATCAAGACTAATTCATCTTTAGTTGCAAAGTGCAGCGCCAATTAATACCAAAAAATTAAAATATTTAGTTGCATATATATATATATATATATTATATATATATATATATAAAATCAAAATCTCAATAGAAGTAGCTTTGAAGATGAAGGAGGAGGAGGAGGAAAACGAAACCAAGGAAGAAGGAAAGAAGAAATACGTTGTGGTTGGACTTTGGAGTCGCCGGAAAAGTCTGACTGGTCATTGCCTCACTAGAGAAGTCTAGTCGAGTCGATGGGTTGGAGTCAAGTTGTAGTTTACGAATGCAACTGTGCAAATTTGGAAAGAAAACCCTAAAATTTAACTTTTAAAACACTACATTTTTTTTTTGAAATAGGTAACTTTCTTTTAAAACCTTAAATTGATTGTTTTTTTTTACGAAAATACAAAAAGTGACTCCTTGGTCGCCATGGCGTTGCCTTTTGAAGATCGCCTCGCCACAAAGATAATAGGCGCTGAAGGATCGCCTTGCCTTGCCTCTTGCCATTGATGATGAGACGATTACCTTCCACGACATTGTCTCAGCCGTATGATACCGATAGTGTCATAGGAATCAGTTATTTTATTTGCATGGCAAGTTCTATCAATTTTACATGGTGTCATCATTTCCAGCTTAATTTGCTACGCGTATTAATTACTTGCTCTATTCAGTTCTTAGCCTCACTAGTCCTTATTGAATTCAATTGTTTATTTTAATTGCAAGTGCGATCAAGACTAATTCATCTTTTCTCTTTGAGCTTACTCAGCAGCGTGAATTTTTGTTAACTACTCTCAGTCTTATGATGCAGATATTGTGATCGGTTTCAGTTGCTTTAGTTGAATTGCAAGTGCTATCAATTTTTACTTTCCAGCATAATTTGCTACTTGTTTTTACCTACTTTCTCCATTCAGTTCTTAGCCTCACTAATCCTTATTGGATTCAATTGTGTATTTGAATTGCAACTGCGATCAGGACTAGTTGGTATTGATCATTTCTAGCATTTATTTTCATTAATTACTTGCTTCATTCTGTTCTTAGGCTGAATTATCCAATTCTATTTGCATTCAGTTTCTATTTGAATGGCTAGCGCGATCAATGTTTACTCAGTGTGCATTCTTTCTTCATTCAGTTCTAAGCCTCATTTTTCCTTGATGGATACAATCTTTTATTTGAATTGCTAGTGCAATCAATGGTTACTTGGTATTCATCCTTTCAAGCATAATTGGGTACTATTATTTTTTGGTAATTACCTGCTTCACTCAGTTCTTAAGGATAACTTTTTTTACTTGTTAGAGAAGCATAATGTTTTCAATAGTTAGGTATACAGTCTGCTTTGTTTCTCCCTTGTCCGCAAAGCAAAAATGACATAATCACTATTTGAAGAGTCAAAAAGGTATTTGAAAAATACTATTTAAGAAAAAGGAAGAAATCTATACACTGAAAGATTAGATTAGTTGATTTCTACTTCAAATATAATCATCCTTGCAGCTATGGAGGAGTAGCATTGCGCCAAAAATAATATCATGCTGCTCTAGCAACAAACTTATCTGATTCAATTTTATTGGTTTATAACCTTTCAGCTGGAGACTCTTCCTGAATTGATTGCTGGGGTTTGGTCTGATGACAGCAGTTTGCAACTTGAATGTACAACACAATTCCGGAAACTGCTTTCAATTGGTCAGTGTTGCTTTGCTTTTTCCTAAATGTATTTCTGTTTGATCACCTTGACAATGAATGTTTTTCCTCTCTGTATCTTTGTGTCTTAATTAGTATGCGTGTTCACTTCTGGTTGTTTTGGCAGAACGCAATCCTCCTATAGAGGAAGTGATACAGTCTGGGGTAGTTCCTCGCTTTGTTGAATTTCTTGCTCGAGATGACTATCCTCAACTGCAGGTTTTTTTACAAAATCTATTATTTTTGTTTTTTGTTTTGCAGTTCCATCTTTATTTCTAATGTTTACATAATTGGCATTCTATAATCTAGTTTGAGGCAGCGTGGGCTCTTACAAATATTGCATCTGGTACATCAGAAAACACTAAAGTTGTGATTGATTATGGTTCTGTCCCAATTTTCATCAGACTTCTAAGTTCACCAAGTGATGATGTCCGTGAACAGGTAAAACTTTATATATAAGAGGGCTAAGCTTTCATGTTTCTTCTCATAATTGTCATGATATTATGTCTATTTTTCTTAAAAAAATTGGGGTTACGGGAAGGAGTAATGGGGGAGAGAATTACAAAGTGGAAATCAAACCCTCACTGGCAAGATGAAAGTTCAAGTATTCAACCAACTTAGCTACTAAGATTCTCCTGATATTGTATGTATTATGCCAATTTATTTCTGAGAAGTTAAAAATTCTTTTATTTTGATATTTTTTTTAAAAAAATTTATAGGCCGTTTGGGCTTTGGGAAATATTGCTGGTGACTCGCCCAAGTATCGTGACCTTGTGCTTGGCCA</genome_strand>
        <mrna_strand>CCTGTTAATCTTTTTATAAACAATCCAAATTTTCCCCTAACCCCGATTCCACTCTCAATTGTCTTCTTCCTCATTTTCCTATTTAACAAAACTCAATTTCTCATTTCCAATTCCTCAAACTGAATTTTGATCATAGAGATTATCGATTATCGAGTTGAGTTCAAAATTTCGATTCACCGGAGCTATGTCACTGAGGCCCAACTCGAGAACGGAGGCTCGCCGGAGCAGGTACAAAGTTGCCGTATATGCCGAGGAAGGACGGACAAGAAGGGAAGATAACATGGTTGAGATCCGGAAGAATAAAACATAACAAAATTTGCTTAATAAGCGTCCCGAAGGTTTACTACAAGCTCAGCAGTTTCCTAGCACTGCTGCTGTTTCTCACCTTGATAAGAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGAGACTCTTCCTGAATTGATTGCTGGAGTTTGGTCTGATGACAGCATTTTGCAACTTGAATGTACAACACAATTCCGGAAACTGCTTTCAATTG............................................................................................................................AACGCAATCCTCCTATACAGGAAGTGATACAATCTGGGGAACTTCCTCGCTTTGTTGAATATCTTGCTCGAGATGACTATCATCAACTGCAG..........................................................................................TTTGAGGCAGCGTGGGCTCTTACAAATATTGCGTCTGGTACATCATAAAACACTAAAGCTGCGATAGATTATGGTTCTGTCCCAATTTTCATCACACTTCTAAGTTCACCAAGCGATGATGTCCGTGAACAA......................................................................................................................................................................................................................................................................................GCAGATTGGGCTTTGGGAAATATTGCTGGTGACTCGCCCAAGTATCGTGACCTTGTGCTTGGCCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLe0039G15-FcnBD/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E739017" ref_strand="+" ref_description="SGN-E739017 [LC15DC12]">
      <seq>cattttcggcttcctcattttcctatttaacaaaactcaatttcgcatttcgaattcctcaaactgaattttgttcatagagattatcgattatcgagttgagttcagaatttcgattcaccggagctatgtcactgaggccgaactcgagaacggaggctcgccggagcaggtacaaagttgccgtcgatgcggaggaaggacggagaagaagggaagataacatggttgagatccggaagaataaaagagaagagaatttgcttaagaagcgtcgtgaaggtttactacaagctcagcagtttcctagcactgctgctgtttctcaccttgataagaagctggagactcttcctgaattgattgctggggtttggtctgatgacagcagtttgcaacttgaatgtacaacacaattccggaaactgctttcaattgaacgcaatcctcctatagaggaagtgatacagtctggggtagttcctcgctttgttgaatttcttgctcgagatgactatcctcaactgcagtttgaggcagcgtgggctcttacaaatattgcatctggtacatcagaaaacactaaagttgtgattgattatggttctgtcccaattttcatcagacttctaagttcaccaagtgatgatgtccgtgaacaggccgtttgggctttgggaaatattgctggtgactcgcccaagtatcgtgaccttgtgcttggccatggagctttagtggcattgctggcacaatttaatgagcaggcaaagctatctatgttgagaaatgctacctggacattgtcaaacttttgtaggggaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLe0039G15-FcnBD/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C06SLe0039G15.1" temp_strand="+" temp_description="C06SLe0039G15.1  AC216657.1 htgs_phase:1 submitted_to_sgn_as:C06SLe0039G15 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="15655" stop="19646"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15954" g_stop="16294" g_length="341"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="341" r_length="341" r_score="0.988"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16295" i_stop="18369" i_length="2075">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.971" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18370" g_stop="18466" g_length="97"/>
          <reference_exon_boundary r_type="cDNA" r_start="342" r_stop="438" r_length="97" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="18467" i_stop="18590" i_length="124">
            <donor d_prob="0.851" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="18591" g_stop="18682" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="439" r_stop="530" r_length="92" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="18683" i_stop="18772" i_length="90">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.967" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="18773" g_stop="18904" g_length="132"/>
          <reference_exon_boundary r_type="cDNA" r_start="531" r_stop="662" r_length="132" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="18905" i_stop="19182" i_length="278">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="19183" g_stop="19346" g_length="164"/>
          <reference_exon_boundary r_type="cDNA" r_start="663" r_stop="826" r_length="164" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLe0039G15.1" gen_strand="+" ref_id="SGN-E739017" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>826</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLe0039G15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E739017" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15954" e_stop="16294"/>
          <exon e_start="18370" e_stop="18466"/>
          <exon e_start="18591" e_stop="18682"/>
          <exon e_start="18773" e_stop="18904"/>
          <exon e_start="19183" e_stop="19346"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATTGTCTTCTTCCTCATTTTCCTATTTAACAAAACTCAATTTCGCATTTCGAATTCCTCAAACTGAATTTTGTTCATAGAGATTATCGATTATCGAGTTGAGTTCAGAATTTCGATTCACCGGAGCTATGTCACTGAGGCCGAACTCGAGAACGGAGGCTCGCCGGAGCAGGTACAAAGTTGCCGTCGATGCGGAGGAAGGACGGAGAAGAAGGGAAGATAACATGGTTGAGATCCGGAAGAATAAAAGAGAAGAGAATTTGCTTAAGAAGCGTCGTGAAGGTTTACTACAAGCTCAGCAGTTTCCTAGCACTGCTGCTGTTTCTCACCTTGATAAGAAGGTATAGATTTTTTTCGTTGATTAACTTTTAGTTTCTTAGATACATATATTTTGATCGAATTTGATTGTCTGATTTGAATTTTCAAGTGCGATCAATGTTTACTCAGTGTGTGTCCTTGTGAGCTTAATTCGTTACTTCGATTTTTTCGTTTAGTTACTTGCTTCATTCAGTTCTAAACCTCAATTATGCTTAATTGATTCAATTATTTGTTTGAAGTTCAAGTGTGATCACTGTTTACTCGGTTTTCTCTTTTACGAGCTTAGTTCAGTACTTCGTATTTTTTGTTATTTAAATGCTTAATTTAGTTCTTAGATTCACTTATGCTTATTGAAATCAATTATTTGATTGAAATGCAAGTGCGTCAATGTTTACTCTCGGTGTTCGTCCTATCTAAGATAATCGGCTACTTGTATTTTTCGTTATTTAAATGCTTCATTCAGTTCTTACCTTTGCTTATCCTCATTGGATTCAATTGTTTTATCAAGACTAATTCATCTTTAGTTGCAAAGTGCAGCGCCAATTAATACCAAAAAATTAAAATATTTAGTTGCATATATATATATATATATATTATATATATATATATATAAAATCAAAATCTCAATAGAAGTAGCTTTGAAGATGAAGGAGGAGGAGGAGGAAAACGAAACCAAGGAAGAAGGAAAGAAGAAATACGTTGTGGTTGGACTTTGGAGTCGCCGGAAAAGTCTGACTGGTCATTGCCTCACTAGAGAAGTCTAGTCGAGTCGATGGGTTGGAGTCAAGTTGTAGTTTACGAATGCAACTGTGCAAATTTGGAAAGAAAACCCTAAAATTTAACTTTTAAAACACTACATTTTTTTTTTGAAATAGGTAACTTTCTTTTAAAACCTTAAATTGATTGTTTTTTTTTACGAAAATACAAAAAGTGACTCCTTGGTCGCCATGGCGTTGCCTTTTGAAGATCGCCTCGCCACAAAGATAATAGGCGCTGAAGGATCGCCTTGCCTTGCCTCTTGCCATTGATGATGAGACGATTACCTTCCACGACATTGTCTCAGCCGTATGATACCGATAGTGTCATAGGAATCAGTTATTTTATTTGCATGGCAAGTTCTATCAATTTTACATGGTGTCATCATTTCCAGCTTAATTTGCTACGCGTATTAATTACTTGCTCTATTCAGTTCTTAGCCTCACTAGTCCTTATTGAATTCAATTGTTTATTTTAATTGCAAGTGCGATCAAGACTAATTCATCTTTTCTCTTTGAGCTTACTCAGCAGCGTGAATTTTTGTTAACTACTCTCAGTCTTATGATGCAGATATTGTGATCGGTTTCAGTTGCTTTAGTTGAATTGCAAGTGCTATCAATTTTTACTTTCCAGCATAATTTGCTACTTGTTTTTACCTACTTTCTCCATTCAGTTCTTAGCCTCACTAATCCTTATTGGATTCAATTGTGTATTTGAATTGCAACTGCGATCAGGACTAGTTGGTATTGATCATTTCTAGCATTTATTTTCATTAATTACTTGCTTCATTCTGTTCTTAGGCTGAATTATCCAATTCTATTTGCATTCAGTTTCTATTTGAATGGCTAGCGCGATCAATGTTTACTCAGTGTGCATTCTTTCTTCATTCAGTTCTAAGCCTCATTTTTCCTTGATGGATACAATCTTTTATTTGAATTGCTAGTGCAATCAATGGTTACTTGGTATTCATCCTTTCAAGCATAATTGGGTACTATTATTTTTTGGTAATTACCTGCTTCACTCAGTTCTTAAGGATAACTTTTTTTACTTGTTAGAGAAGCATAATGTTTTCAATAGTTAGGTATACAGTCTGCTTTGTTTCTCCCTTGTCCGCAAAGCAAAAATGACATAATCACTATTTGAAGAGTCAAAAAGGTATTTGAAAAATACTATTTAAGAAAAAGGAAGAAATCTATACACTGAAAGATTAGATTAGTTGATTTCTACTTCAAATATAATCATCCTTGCAGCTATGGAGGAGTAGCATTGCGCCAAAAATAATATCATGCTGCTCTAGCAACAAACTTATCTGATTCAATTTTATTGGTTTATAACCTTTCAGCTGGAGACTCTTCCTGAATTGATTGCTGGGGTTTGGTCTGATGACAGCAGTTTGCAACTTGAATGTACAACACAATTCCGGAAACTGCTTTCAATTGGTCAGTGTTGCTTTGCTTTTTCCTAAATGTATTTCTGTTTGATCACCTTGACAATGAATGTTTTTCCTCTCTGTATCTTTGTGTCTTAATTAGTATGCGTGTTCACTTCTGGTTGTTTTGGCAGAACGCAATCCTCCTATAGAGGAAGTGATACAGTCTGGGGTAGTTCCTCGCTTTGTTGAATTTCTTGCTCGAGATGACTATCCTCAACTGCAGGTTTTTTTACAAAATCTATTATTTTTGTTTTTTGTTTTGCAGTTCCATCTTTATTTCTAATGTTTACATAATTGGCATTCTATAATCTAGTTTGAGGCAGCGTGGGCTCTTACAAATATTGCATCTGGTACATCAGAAAACACTAAAGTTGTGATTGATTATGGTTCTGTCCCAATTTTCATCAGACTTCTAAGTTCACCAAGTGATGATGTCCGTGAACAGGTAAAACTTTATATATAAGAGGGCTAAGCTTTCATGTTTCTTCTCATAATTGTCATGATATTATGTCTATTTTTCTTAAAAAAATTGGGGTTACGGGAAGGAGTAATGGGGGAGAGAATTACAAAGTGGAAATCAAACCCTCACTGGCAAGATGAAAGTTCAAGTATTCAACCAACTTAGCTACTAAGATTCTCCTGATATTGTATGTATTATGCCAATTTATTTCTGAGAAGTTAAAAATTCTTTTATTTTGATATTTTTTTTAAAAAAATTTATAGGCCGTTTGGGCTTTGGGAAATATTGCTGGTGACTCGCCCAAGTATCGTGACCTTGTGCTTGGCCATGGAGCTTTAGTGGCATTGCTGGCACAATTTAATGAGCAGGCAAAGCTATCTATGTTGAGAAATGCTACCTGGACATTGTCAAACTTTTGTAGGGGAAA</genome_strand>
        <mrna_strand>CATTTTCGGCTTCCTCATTTTCCTATTTAACAAAACTCAATTTCGCATTTCGAATTCCTCAAACTGAATTTTGTTCATAGAGATTATCGATTATCGAGTTGAGTTCAGAATTTCGATTCACCGGAGCTATGTCACTGAGGCCGAACTCGAGAACGGAGGCTCGCCGGAGCAGGTACAAAGTTGCCGTCGATGCGGAGGAAGGACGGAGAAGAAGGGAAGATAACATGGTTGAGATCCGGAAGAATAAAAGAGAAGAGAATTTGCTTAAGAAGCGTCGTGAAGGTTTACTACAAGCTCAGCAGTTTCCTAGCACTGCTGCTGTTTCTCACCTTGATAAGAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGAGACTCTTCCTGAATTGATTGCTGGGGTTTGGTCTGATGACAGCAGTTTGCAACTTGAATGTACAACACAATTCCGGAAACTGCTTTCAATTG............................................................................................................................AACGCAATCCTCCTATAGAGGAAGTGATACAGTCTGGGGTAGTTCCTCGCTTTGTTGAATTTCTTGCTCGAGATGACTATCCTCAACTGCAG..........................................................................................TTTGAGGCAGCGTGGGCTCTTACAAATATTGCATCTGGTACATCAGAAAACACTAAAGTTGTGATTGATTATGGTTCTGTCCCAATTTTCATCAGACTTCTAAGTTCACCAAGTGATGATGTCCGTGAACAG......................................................................................................................................................................................................................................................................................GCCGTTTGGGCTTTGGGAAATATTGCTGGTGACTCGCCCAAGTATCGTGACCTTGTGCTTGGCCATGGAGCTTTAGTGGCATTGCTGGCACAATTTAATGAGCAGGCAAAGCTATCTATGTTGAGAAATGCTACCTGGACATTGTCAAACTTTTGTAGGGGAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLe0039G15-FcnBD/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E301119" ref_strand="+" ref_description="SGN-E301119 [cLEW-22-G15]">
      <seq>tcttcttcctcattttcctatttaacaaaactcaatttcgcatttcgaattcctcaaactgaattttgttcatagagattatcgattatcgagttgagttcagaatttcgattcaccggagctatgtcactgaggccgaactcgagaacggaggctcgccggagcaggtacaaagttgccgtcgatgcggaggaaggacggagaagaagggaagataacatggttgagatccggaagaataaaagagaacagaatttgcttaagaagcgtcgtgaaggtttactacaagctcagcagtttcctagcactgctgctgtttctcaccttgataagaagctggagactcttcctgaattgattgctggggtttggtctgatgacagcagtttgcaacttgaatgtacaacacaattccggaaactgctttcaattgaacgcaatcctcctatagaggaagtgatacagtctggggtagttcctcgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLe0039G15-FcnBD/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C06SLe0039G15.1" temp_strand="+" temp_description="C06SLe0039G15.1  AC216657.1 htgs_phase:1 submitted_to_sgn_as:C06SLe0039G15 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="15659" stop="18941"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15959" g_stop="16294" g_length="336"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="336" r_length="336" r_score="0.997"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16295" i_stop="18369" i_length="2075">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.971" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18370" g_stop="18466" g_length="97"/>
          <reference_exon_boundary r_type="cDNA" r_start="337" r_stop="433" r_length="97" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="18467" i_stop="18590" i_length="124">
            <donor d_prob="0.851" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="18591" g_stop="18641" g_length="51"/>
          <reference_exon_boundary r_type="cDNA" r_start="434" r_stop="484" r_length="51" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLe0039G15.1" gen_strand="+" ref_id="SGN-E301119" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>484</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLe0039G15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E301119" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15959" e_stop="16294"/>
          <exon e_start="18370" e_stop="18466"/>
          <exon e_start="18591" e_stop="18641"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTTCTTCCTCATTTTCCTATTTAACAAAACTCAATTTCGCATTTCGAATTCCTCAAACTGAATTTTGTTCATAGAGATTATCGATTATCGAGTTGAGTTCAGAATTTCGATTCACCGGAGCTATGTCACTGAGGCCGAACTCGAGAACGGAGGCTCGCCGGAGCAGGTACAAAGTTGCCGTCGATGCGGAGGAAGGACGGAGAAGAAGGGAAGATAACATGGTTGAGATCCGGAAGAATAAAAGAGAAGAGAATTTGCTTAAGAAGCGTCGTGAAGGTTTACTACAAGCTCAGCAGTTTCCTAGCACTGCTGCTGTTTCTCACCTTGATAAGAAGGTATAGATTTTTTTCGTTGATTAACTTTTAGTTTCTTAGATACATATATTTTGATCGAATTTGATTGTCTGATTTGAATTTTCAAGTGCGATCAATGTTTACTCAGTGTGTGTCCTTGTGAGCTTAATTCGTTACTTCGATTTTTTCGTTTAGTTACTTGCTTCATTCAGTTCTAAACCTCAATTATGCTTAATTGATTCAATTATTTGTTTGAAGTTCAAGTGTGATCACTGTTTACTCGGTTTTCTCTTTTACGAGCTTAGTTCAGTACTTCGTATTTTTTGTTATTTAAATGCTTAATTTAGTTCTTAGATTCACTTATGCTTATTGAAATCAATTATTTGATTGAAATGCAAGTGCGTCAATGTTTACTCTCGGTGTTCGTCCTATCTAAGATAATCGGCTACTTGTATTTTTCGTTATTTAAATGCTTCATTCAGTTCTTACCTTTGCTTATCCTCATTGGATTCAATTGTTTTATCAAGACTAATTCATCTTTAGTTGCAAAGTGCAGCGCCAATTAATACCAAAAAATTAAAATATTTAGTTGCATATATATATATATATATATTATATATATATATATATAAAATCAAAATCTCAATAGAAGTAGCTTTGAAGATGAAGGAGGAGGAGGAGGAAAACGAAACCAAGGAAGAAGGAAAGAAGAAATACGTTGTGGTTGGACTTTGGAGTCGCCGGAAAAGTCTGACTGGTCATTGCCTCACTAGAGAAGTCTAGTCGAGTCGATGGGTTGGAGTCAAGTTGTAGTTTACGAATGCAACTGTGCAAATTTGGAAAGAAAACCCTAAAATTTAACTTTTAAAACACTACATTTTTTTTTTGAAATAGGTAACTTTCTTTTAAAACCTTAAATTGATTGTTTTTTTTTACGAAAATACAAAAAGTGACTCCTTGGTCGCCATGGCGTTGCCTTTTGAAGATCGCCTCGCCACAAAGATAATAGGCGCTGAAGGATCGCCTTGCCTTGCCTCTTGCCATTGATGATGAGACGATTACCTTCCACGACATTGTCTCAGCCGTATGATACCGATAGTGTCATAGGAATCAGTTATTTTATTTGCATGGCAAGTTCTATCAATTTTACATGGTGTCATCATTTCCAGCTTAATTTGCTACGCGTATTAATTACTTGCTCTATTCAGTTCTTAGCCTCACTAGTCCTTATTGAATTCAATTGTTTATTTTAATTGCAAGTGCGATCAAGACTAATTCATCTTTTCTCTTTGAGCTTACTCAGCAGCGTGAATTTTTGTTAACTACTCTCAGTCTTATGATGCAGATATTGTGATCGGTTTCAGTTGCTTTAGTTGAATTGCAAGTGCTATCAATTTTTACTTTCCAGCATAATTTGCTACTTGTTTTTACCTACTTTCTCCATTCAGTTCTTAGCCTCACTAATCCTTATTGGATTCAATTGTGTATTTGAATTGCAACTGCGATCAGGACTAGTTGGTATTGATCATTTCTAGCATTTATTTTCATTAATTACTTGCTTCATTCTGTTCTTAGGCTGAATTATCCAATTCTATTTGCATTCAGTTTCTATTTGAATGGCTAGCGCGATCAATGTTTACTCAGTGTGCATTCTTTCTTCATTCAGTTCTAAGCCTCATTTTTCCTTGATGGATACAATCTTTTATTTGAATTGCTAGTGCAATCAATGGTTACTTGGTATTCATCCTTTCAAGCATAATTGGGTACTATTATTTTTTGGTAATTACCTGCTTCACTCAGTTCTTAAGGATAACTTTTTTTACTTGTTAGAGAAGCATAATGTTTTCAATAGTTAGGTATACAGTCTGCTTTGTTTCTCCCTTGTCCGCAAAGCAAAAATGACATAATCACTATTTGAAGAGTCAAAAAGGTATTTGAAAAATACTATTTAAGAAAAAGGAAGAAATCTATACACTGAAAGATTAGATTAGTTGATTTCTACTTCAAATATAATCATCCTTGCAGCTATGGAGGAGTAGCATTGCGCCAAAAATAATATCATGCTGCTCTAGCAACAAACTTATCTGATTCAATTTTATTGGTTTATAACCTTTCAGCTGGAGACTCTTCCTGAATTGATTGCTGGGGTTTGGTCTGATGACAGCAGTTTGCAACTTGAATGTACAACACAATTCCGGAAACTGCTTTCAATTGGTCAGTGTTGCTTTGCTTTTTCCTAAATGTATTTCTGTTTGATCACCTTGACAATGAATGTTTTTCCTCTCTGTATCTTTGTGTCTTAATTAGTATGCGTGTTCACTTCTGGTTGTTTTGGCAGAACGCAATCCTCCTATAGAGGAAGTGATACAGTCTGGGGTAGTTCCTCGCT</genome_strand>
        <mrna_strand>TCTTCTTCCTCATTTTCCTATTTAACAAAACTCAATTTCGCATTTCGAATTCCTCAAACTGAATTTTGTTCATAGAGATTATCGATTATCGAGTTGAGTTCAGAATTTCGATTCACCGGAGCTATGTCACTGAGGCCGAACTCGAGAACGGAGGCTCGCCGGAGCAGGTACAAAGTTGCCGTCGATGCGGAGGAAGGACGGAGAAGAAGGGAAGATAACATGGTTGAGATCCGGAAGAATAAAAGAGAACAGAATTTGCTTAAGAAGCGTCGTGAAGGTTTACTACAAGCTCAGCAGTTTCCTAGCACTGCTGCTGTTTCTCACCTTGATAAGAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGAGACTCTTCCTGAATTGATTGCTGGGGTTTGGTCTGATGACAGCAGTTTGCAACTTGAATGTACAACACAATTCCGGAAACTGCTTTCAATTG............................................................................................................................AACGCAATCCTCCTATAGAGGAAGTGATACAGTCTGGGGTAGTTCCTCGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLe0039G15-FcnBD/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E745184" ref_strand="+" ref_description="SGN-E745184 [GI|47105944]">
      <seq>gctcaaactgaattttgttcatagagattatcgattatcgagttgagttcagaatttcgattcaccggagctatgtcactgaggccgaactcgagaacggaggctcgccggagcaggtacaaagttgccgtcgatgcggaggaaggacggagaagaagggaagataacatggttgagatccggaagaataaaagagaagagaatttgcttaagaagcgtcgtgaaggtttactacaagctcagcagtttcctagcactgctgctgtttctcaccttgataagaagctggagactcttcctgaattgattgctggggtttggtctgatgacagcagtttgcaacttgaatgtacaacacaattccggaaactgctttcaattgaacgcaatcctcctatagaggaagtgatacagtctggggtagttcctcgctttgttgaatttcttgctcgagatgactatcctcaactgcagtttgaggcagcgtgggctcttacaaatattgcatctggtacatcagaaaacactaaagttgtgattgattatggttctgtcccaattttcatcagacttctaagttcaccaagtgatgatgtccgtgaacaggccgtttgggctttgggaaatattgctggtgactcgcccaagtatcgtgaccttgtgcttggccatggagctttagtggcattgctggcacaatttaatgagcaggcaaagctatctatgttgagaaatgctacctggacattgtcaaacttttgtaggggaaaacctcagccactgttcgagcagacaaaagcggcactccccactcttggtcgccttatccactcaaatgatgaagaagtcttgacagatgcatgctgggctctttcatatctttctgatggaactaatgacaaaatccaggctgttattgaagctggagtgtgttcccgccttgttgagctgctacttcattcttcaccatctgttctcattcctgccttgcgcactgttggtaacatagtcacaggagacgatatccaaactcaggttatgattgaccatcatgctcttccctgccttgttaacctgttgacgcaaaattacaaaaaaagcattaaaaaggaagcttgttggacaatctcgaacattacagctggtaatagaaatcaaattcagattgtgatcgaggctggcattattgcccctcttgtatatctgctacaaaatgctgaatttgagataaagaaagaggctgcttgggcaatttcaaatgctacgtccggtggaaatcatgatcaaatcaagttcttggtgagccaaggttgtataaaaccattgtgtgatcttctggtatgtcctgacccaagaattgtcactgtctgcttggaagggcttgagaatattctgaagattggggaagctgataaggatctaggaaacacagaaggcgtgaatgtttatgcccagttaatcgacgaggctgaaggtctagaaaagattgaaaacctccaaagccatgacaacactgaaatctatgagaaagcagtgaagatcctcgaaacttattggttggaggaggaagatgtgccggtttcattaaatgaagatcaattcgaatttggaggggccgatatatctcttccatcgggaggatttaacttcagttgatggggtttggctagcaggtcagtgagtggttttaaattggagaaacatcctctttaaactatgtgtagagagagttgtcatctacttgggggaggtttggattttacatatattttcttctatttattgatggagttggtgttgtataagttactttttcccctagactagacatattggtggtggtggatatatatatgtatacatgttaatgtacaagtcatacgtgggctctccatgacattatttggtgtaaacatatacttgtttccgcaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLe0039G15-FcnBD/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C06SLe0039G15.1" temp_strand="+" temp_description="C06SLe0039G15.1  AC216657.1 htgs_phase:1 submitted_to_sgn_as:C06SLe0039G15 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="15711" stop="22291"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16010" g_stop="16294" g_length="285"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="285" r_length="285" r_score="0.996"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16295" i_stop="18369" i_length="2075">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.971" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18370" g_stop="18466" g_length="97"/>
          <reference_exon_boundary r_type="cDNA" r_start="286" r_stop="382" r_length="97" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="18467" i_stop="18590" i_length="124">
            <donor d_prob="0.851" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="18591" g_stop="18682" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="383" r_stop="474" r_length="92" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="18683" i_stop="18772" i_length="90">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.967" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="18773" g_stop="18904" g_length="132"/>
          <reference_exon_boundary r_type="cDNA" r_start="475" r_stop="606" r_length="132" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="18905" i_stop="19182" i_length="278">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="19183" g_stop="19368" g_length="186"/>
          <reference_exon_boundary r_type="cDNA" r_start="607" r_stop="792" r_length="186" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="19369" i_stop="19455" i_length="87">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.958" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="19456" g_stop="19619" g_length="164"/>
          <reference_exon_boundary r_type="cDNA" r_start="793" r_stop="956" r_length="164" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="19620" i_stop="19715" i_length="96">
            <donor d_prob="0.914" d_score="1.00"/>
            <acceptor a_prob="0.500" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="19716" g_stop="19794" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="957" r_stop="1035" r_length="79" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="19795" i_stop="20646" i_length="852">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.941" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="20647" g_stop="20775" g_length="129"/>
          <reference_exon_boundary r_type="cDNA" r_start="1036" r_stop="1164" r_length="129" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="20776" i_stop="20910" i_length="135">
            <donor d_prob="0.969" d_score="1.00"/>
            <acceptor a_prob="0.976" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="20911" g_stop="21038" g_length="128"/>
          <reference_exon_boundary r_type="cDNA" r_start="1165" r_stop="1292" r_length="128" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="21039" i_stop="21118" i_length="80">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.763" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="21119" g_stop="21486" g_length="368"/>
          <reference_exon_boundary r_type="cDNA" r_start="1293" r_stop="1660" r_length="368" r_score="1.000"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="21487" i_stop="21723" i_length="237">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="21724" g_stop="21991" g_length="268"/>
          <reference_exon_boundary r_type="cDNA" r_start="1661" r_stop="1928" r_length="268" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="1931" polyA_stop="1946"/>
      <MATCH_line gen_id="C06SLe0039G15.1" gen_strand="+" ref_id="SGN-E745184" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>1928</cumulative_length_of_scored_exons>
        <coverage percentage="0.991" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLe0039G15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E745184" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16010" e_stop="16294"/>
          <exon e_start="18370" e_stop="18466"/>
          <exon e_start="18591" e_stop="18682"/>
          <exon e_start="18773" e_stop="18904"/>
          <exon e_start="19183" e_stop="19368"/>
          <exon e_start="19456" e_stop="19619"/>
          <exon e_start="19716" e_stop="19794"/>
          <exon e_start="20647" e_stop="20775"/>
          <exon e_start="20911" e_stop="21038"/>
          <exon e_start="21119" e_stop="21486"/>
          <exon e_start="21724" e_stop="21991"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCTCAAACTGAATTTTGTTCATAGAGATTATCGATTATCGAGTTGAGTTCAGAATTTCGATTCACCGGAGCTATGTCACTGAGGCCGAACTCGAGAACGGAGGCTCGCCGGAGCAGGTACAAAGTTGCCGTCGATGCGGAGGAAGGACGGAGAAGAAGGGAAGATAACATGGTTGAGATCCGGAAGAATAAAAGAGAAGAGAATTTGCTTAAGAAGCGTCGTGAAGGTTTACTACAAGCTCAGCAGTTTCCTAGCACTGCTGCTGTTTCTCACCTTGATAAGAAGGTATAGATTTTTTTCGTTGATTAACTTTTAGTTTCTTAGATACATATATTTTGATCGAATTTGATTGTCTGATTTGAATTTTCAAGTGCGATCAATGTTTACTCAGTGTGTGTCCTTGTGAGCTTAATTCGTTACTTCGATTTTTTCGTTTAGTTACTTGCTTCATTCAGTTCTAAACCTCAATTATGCTTAATTGATTCAATTATTTGTTTGAAGTTCAAGTGTGATCACTGTTTACTCGGTTTTCTCTTTTACGAGCTTAGTTCAGTACTTCGTATTTTTTGTTATTTAAATGCTTAATTTAGTTCTTAGATTCACTTATGCTTATTGAAATCAATTATTTGATTGAAATGCAAGTGCGTCAATGTTTACTCTCGGTGTTCGTCCTATCTAAGATAATCGGCTACTTGTATTTTTCGTTATTTAAATGCTTCATTCAGTTCTTACCTTTGCTTATCCTCATTGGATTCAATTGTTTTATCAAGACTAATTCATCTTTAGTTGCAAAGTGCAGCGCCAATTAATACCAAAAAATTAAAATATTTAGTTGCATATATATATATATATATATTATATATATATATATATAAAATCAAAATCTCAATAGAAGTAGCTTTGAAGATGAAGGAGGAGGAGGAGGAAAACGAAACCAAGGAAGAAGGAAAGAAGAAATACGTTGTGGTTGGACTTTGGAGTCGCCGGAAAAGTCTGACTGGTCATTGCCTCACTAGAGAAGTCTAGTCGAGTCGATGGGTTGGAGTCAAGTTGTAGTTTACGAATGCAACTGTGCAAATTTGGAAAGAAAACCCTAAAATTTAACTTTTAAAACACTACATTTTTTTTTTGAAATAGGTAACTTTCTTTTAAAACCTTAAATTGATTGTTTTTTTTTACGAAAATACAAAAAGTGACTCCTTGGTCGCCATGGCGTTGCCTTTTGAAGATCGCCTCGCCACAAAGATAATAGGCGCTGAAGGATCGCCTTGCCTTGCCTCTTGCCATTGATGATGAGACGATTACCTTCCACGACATTGTCTCAGCCGTATGATACCGATAGTGTCATAGGAATCAGTTATTTTATTTGCATGGCAAGTTCTATCAATTTTACATGGTGTCATCATTTCCAGCTTAATTTGCTACGCGTATTAATTACTTGCTCTATTCAGTTCTTAGCCTCACTAGTCCTTATTGAATTCAATTGTTTATTTTAATTGCAAGTGCGATCAAGACTAATTCATCTTTTCTCTTTGAGCTTACTCAGCAGCGTGAATTTTTGTTAACTACTCTCAGTCTTATGATGCAGATATTGTGATCGGTTTCAGTTGCTTTAGTTGAATTGCAAGTGCTATCAATTTTTACTTTCCAGCATAATTTGCTACTTGTTTTTACCTACTTTCTCCATTCAGTTCTTAGCCTCACTAATCCTTATTGGATTCAATTGTGTATTTGAATTGCAACTGCGATCAGGACTAGTTGGTATTGATCATTTCTAGCATTTATTTTCATTAATTACTTGCTTCATTCTGTTCTTAGGCTGAATTATCCAATTCTATTTGCATTCAGTTTCTATTTGAATGGCTAGCGCGATCAATGTTTACTCAGTGTGCATTCTTTCTTCATTCAGTTCTAAGCCTCATTTTTCCTTGATGGATACAATCTTTTATTTGAATTGCTAGTGCAATCAATGGTTACTTGGTATTCATCCTTTCAAGCATAATTGGGTACTATTATTTTTTGGTAATTACCTGCTTCACTCAGTTCTTAAGGATAACTTTTTTTACTTGTTAGAGAAGCATAATGTTTTCAATAGTTAGGTATACAGTCTGCTTTGTTTCTCCCTTGTCCGCAAAGCAAAAATGACATAATCACTATTTGAAGAGTCAAAAAGGTATTTGAAAAATACTATTTAAGAAAAAGGAAGAAATCTATACACTGAAAGATTAGATTAGTTGATTTCTACTTCAAATATAATCATCCTTGCAGCTATGGAGGAGTAGCATTGCGCCAAAAATAATATCATGCTGCTCTAGCAACAAACTTATCTGATTCAATTTTATTGGTTTATAACCTTTCAGCTGGAGACTCTTCCTGAATTGATTGCTGGGGTTTGGTCTGATGACAGCAGTTTGCAACTTGAATGTACAACACAATTCCGGAAACTGCTTTCAATTGGTCAGTGTTGCTTTGCTTTTTCCTAAATGTATTTCTGTTTGATCACCTTGACAATGAATGTTTTTCCTCTCTGTATCTTTGTGTCTTAATTAGTATGCGTGTTCACTTCTGGTTGTTTTGGCAGAACGCAATCCTCCTATAGAGGAAGTGATACAGTCTGGGGTAGTTCCTCGCTTTGTTGAATTTCTTGCTCGAGATGACTATCCTCAACTGCAGGTTTTTTTACAAAATCTATTATTTTTGTTTTTTGTTTTGCAGTTCCATCTTTATTTCTAATGTTTACATAATTGGCATTCTATAATCTAGTTTGAGGCAGCGTGGGCTCTTACAAATATTGCATCTGGTACATCAGAAAACACTAAAGTTGTGATTGATTATGGTTCTGTCCCAATTTTCATCAGACTTCTAAGTTCACCAAGTGATGATGTCCGTGAACAGGTAAAACTTTATATATAAGAGGGCTAAGCTTTCATGTTTCTTCTCATAATTGTCATGATATTATGTCTATTTTTCTTAAAAAAATTGGGGTTACGGGAAGGAGTAATGGGGGAGAGAATTACAAAGTGGAAATCAAACCCTCACTGGCAAGATGAAAGTTCAAGTATTCAACCAACTTAGCTACTAAGATTCTCCTGATATTGTATGTATTATGCCAATTTATTTCTGAGAAGTTAAAAATTCTTTTATTTTGATATTTTTTTTAAAAAAATTTATAGGCCGTTTGGGCTTTGGGAAATATTGCTGGTGACTCGCCCAAGTATCGTGACCTTGTGCTTGGCCATGGAGCTTTAGTGGCATTGCTGGCACAATTTAATGAGCAGGCAAAGCTATCTATGTTGAGAAATGCTACCTGGACATTGTCAAACTTTTGTAGGGGAAAACCTCAGCCACTGTTCGAGCAGGTTTGACTTTAAAGATAAAGTTTGTTTGATCTTTTCAGATATTTATATTACTTTTAAAGGTTATGCCTTTTAAAATTCATCGCGCAGACAAAAGCGGCACTCCCCACTCTTGGTCGCCTTATCCACTCAAATGATGAAGAAGTCTTGACAGATGCATGCTGGGCTCTTTCATATCTTTCTGATGGAACTAATGACAAAATCCAGGCTGTTATTGAAGCTGGAGTGTGTTCCCGCCTTGTTGAGCTGCTACTGTGAGTTATAGATCTTACTTTTGAGGGTTTGTCTTAGGCTTTCGATATGTTAAAATCATAAGTTTCTTACTCCCTTCATCTTTTTTTCGTGAGTAGTCATTCTTCACCATCTGTTCTCATTCCTGCCTTGCGCACTGTTGGTAACATAGTCACAGGAGACGATATCCAAACTCAGGTATTTATCATCCTCCCAGCCAATTTTTCATGTTTGATTTTTTTTTTTCGTTTTTCCCTCTTCTCATCCTTAATTGAGTCTTTGTGTAAACATGAATTCTCAATATCTAATCCATCAGTACGTCAGATGTATCTTCATCTTTTTGTTTAGGTAAATTATGCTGGTCAGATAAAAATACTTAAAAATCTAGCTTTCGTCAATGATAATTCAATTTTTGTAATAATTCTGATAGTCAACTATATCATAATCATGATATGAAAGAAAAGAGGAGTAAAGATTGGCTAGTCAATTAGTTCTCATTAAGTTTCTACCATGTTTAAGAGAGGTTACTCACGGAAGTCTTCGCTAATTCATCCGTGTACTGCAGTCAGTCTTCAGTTATCACGTTTGCCTACCTGAGTAGGGGGTTAGTGGTGTTTGGCTGTTATGATTATTTTTAGAATAAACTTTCCATTGCCGAACTGCTCACTGGGATAGTGTTGCACCACATATTTACGGAACAAATGGTGTTACATCTCTATTTGTTCTTAGGAGAAAAAATAGGGAGAGGAAATTTTCTAAATTTTTGGTCCCTGAAACGTAAGACGAGTGAAATTGAGTTAACTTCTTTGCTATCCTGTTATTCTCCTACCAAGGTAGGGAAGCTCTAATAGGGTAGTATTGTACGGCAGAGGCATGCTCTCTTTCAGTGAGGAGTTATTTGCAACCTTCCATTTTTGTTACCTCTCAGACGTAGTGGAAATAAAATGGACATAAAAACTACATCTTTTGGTTGTTGAAGCAAATTATGTCCTACCTAATTTATCAGCTGGAATCTTTTTTGGTGGACATTGATGAATCTATATTGTTTAGGTTATGATTGACCATCATGCTCTTCCCTGCCTTGTTAACCTGTTGACGCAAAATTACAAAAAAAGCATTAAAAAGGAAGCTTGTTGGACAATCTCGAACATTACAGCTGGTAATAGAAATCAAATTCAGGTATGTTGTATGGTAATTGACAATTTGTGCTTCTTTATCAATTGACAGAGAACTGAAAATAAGTGAAGAAAGAGAACCTTTGCAAGATGATTCAGTTTTGTATAATGATACTGAAAGGGGTTTTAATTGAAATAGATTGTGATCGAGGCTGGCATTATTGCCCCTCTTGTATATCTGCTACAAAATGCTGAATTTGAGATAAAGAAAGAGGCTGCTTGGGCAATTTCAAATGCTACGTCCGGTGGAAATCATGATCAAATCAAGTATGGTTCCTTTAGCATATTCAGTTTCATCTGCTTAACCTTACATCTAGTTTGAAGCTCACATGTAAATTGATTTCTAGGTTCTTGGTGAGCCAAGGTTGTATAAAACCATTGTGTGATCTTCTGGTATGTCCTGACCCAAGAATTGTCACTGTCTGCTTGGAAGGGCTTGAGAATATTCTGAAGATTGGGGAAGCTGATAAGGATCTAGGAAACACAGAAGGCGTGAATGTTTATGCCCAGTTAATCGACGAGGCTGAAGGTCTAGAAAAGATTGAAAACCTCCAAAGCCATGACAACACTGAAATCTATGAGAAAGCAGTGAAGATCCTCGAAACTTATTGGTTGGAGGAGGAAGATGTGCCGGTTTCATTAAATGAAGATCAATTCGAATTTGGAGGGGCCGATATATCTCTTCCATCGGGAGGATTTAACTTCAGTTGATGGGGTATGTTATTCTTCCCTTCTTTTTTATGATTATTTCCCCTCTGTTAACGACGGTTTCCTTTGAAAACTTTTGTTCTTTTGAGCACCTGTTTTATGGTGTAAATTATTTAGCATTAGGATGTGTTAAAATGGTGTTTGAGCGATGATGTAAAGCTAGTCAACCTTACCTTTGATTTAGCAAAAATGGTTTGTTGCAGTTAAAACTTGTGGTAGTTTCTTAATGTTTAATTCTTTCCAGGTTTGGCTAGCAGGTCAGTGAGTGGTTTTAAATTGGAGAAACATCCTCTTTAAACTATGTGTAGAGAGAGTTGTCATCTACTTGGGGGAGGTTTGGATTTTACATATATTTTCTTCTATTTATTGATGGAGTTGGTGTTGTATAAGTTACTTTTTCCCCTAGACTAGACATATTGGTGGTGGTGGATATATATATGTATACATGTTAATGTACAAGTCATACGTGGGCTCTCCATGACATTATTTGGTGTAAACATATACTTGTTTCC</genome_strand>
        <mrna_strand>GCTCAAACTGAATTTTGTTCATAGAGATTATCGATTATCGAGTTGAGTTCAGAATTTCGATTCACCGGAGCTATGTCACTGAGGCCGAACTCGAGAACGGAGGCTCGCCGGAGCAGGTACAAAGTTGCCGTCGATGCGGAGGAAGGACGGAGAAGAAGGGAAGATAACATGGTTGAGATCCGGAAGAATAAAAGAGAAGAGAATTTGCTTAAGAAGCGTCGTGAAGGTTTACTACAAGCTCAGCAGTTTCCTAGCACTGCTGCTGTTTCTCACCTTGATAAGAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGAGACTCTTCCTGAATTGATTGCTGGGGTTTGGTCTGATGACAGCAGTTTGCAACTTGAATGTACAACACAATTCCGGAAACTGCTTTCAATTG............................................................................................................................AACGCAATCCTCCTATAGAGGAAGTGATACAGTCTGGGGTAGTTCCTCGCTTTGTTGAATTTCTTGCTCGAGATGACTATCCTCAACTGCAG..........................................................................................TTTGAGGCAGCGTGGGCTCTTACAAATATTGCATCTGGTACATCAGAAAACACTAAAGTTGTGATTGATTATGGTTCTGTCCCAATTTTCATCAGACTTCTAAGTTCACCAAGTGATGATGTCCGTGAACAG......................................................................................................................................................................................................................................................................................GCCGTTTGGGCTTTGGGAAATATTGCTGGTGACTCGCCCAAGTATCGTGACCTTGTGCTTGGCCATGGAGCTTTAGTGGCATTGCTGGCACAATTTAATGAGCAGGCAAAGCTATCTATGTTGAGAAATGCTACCTGGACATTGTCAAACTTTTGTAGGGGAAAACCTCAGCCACTGTTCGAGCAG.......................................................................................ACAAAAGCGGCACTCCCCACTCTTGGTCGCCTTATCCACTCAAATGATGAAGAAGTCTTGACAGATGCATGCTGGGCTCTTTCATATCTTTCTGATGGAACTAATGACAAAATCCAGGCTGTTATTGAAGCTGGAGTGTGTTCCCGCCTTGTTGAGCTGCTACT................................................................................................TCATTCTTCACCATCTGTTCTCATTCCTGCCTTGCGCACTGTTGGTAACATAGTCACAGGAGACGATATCCAAACTCAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTATGATTGACCATCATGCTCTTCCCTGCCTTGTTAACCTGTTGACGCAAAATTACAAAAAAAGCATTAAAAAGGAAGCTTGTTGGACAATCTCGAACATTACAGCTGGTAATAGAAATCAAATTCAG.......................................................................................................................................ATTGTGATCGAGGCTGGCATTATTGCCCCTCTTGTATATCTGCTACAAAATGCTGAATTTGAGATAAAGAAAGAGGCTGCTTGGGCAATTTCAAATGCTACGTCCGGTGGAAATCATGATCAAATCAA................................................................................GTTCTTGGTGAGCCAAGGTTGTATAAAACCATTGTGTGATCTTCTGGTATGTCCTGACCCAAGAATTGTCACTGTCTGCTTGGAAGGGCTTGAGAATATTCTGAAGATTGGGGAAGCTGATAAGGATCTAGGAAACACAGAAGGCGTGAATGTTTATGCCCAGTTAATCGACGAGGCTGAAGGTCTAGAAAAGATTGAAAACCTCCAAAGCCATGACAACACTGAAATCTATGAGAAAGCAGTGAAGATCCTCGAAACTTATTGGTTGGAGGAGGAAGATGTGCCGGTTTCATTAAATGAAGATCAATTCGAATTTGGAGGGGCCGATATATCTCTTCCATCGGGAGGATTTAACTTCAGTTGATGGG.............................................................................................................................................................................................................................................GTTTGGCTAGCAGGTCAGTGAGTGGTTTTAAATTGGAGAAACATCCTCTTTAAACTATGTGTAGAGAGAGTTGTCATCTACTTGGGGGAGGTTTGGATTTTACATATATTTTCTTCTATTTATTGATGGAGTTGGTGTTGTATAAGTTACTTTTTCCCCTAGACTAGACATATTGGTGGTGGTGGATATATATATGTATACATGTTAATGTACAAGTCATACGTGGGCTCTCCATGACATTATTTGGTGTAAACATATACTTGTTTCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLe0039G15-FcnBD/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E331824" ref_strand="+" ref_description="SGN-E331824 [cTOD-7-M20]">
      <seq>agagagacagtatcgagttgagttcagaatttcgattcaccggagctatgtcactgaggccgaactcgagaacggaggctcgccggagcaggtacaaagttgccgtcgatgcggaggaaggacggagaagaagggaagataacatggttgagatccggaagaataaaagagaagagaatttgcttaagaagcgtcgtgaaggtttactacaagctcagcagtttcctagcactgctgctgtttctcaccttgataagaagctggagactcttcctgaattgattgctggggtttggtctgatgacagcagtttgcaacttgaatgtacaacacaattccggaaactgctttcaattgaacgcaatcctcctatagaggaagtgatacagtctggggtagttcctcgctttgttgaatttcttgctcgagatgactatcctcaactgcagtttgaggcagcgtgggctcttacaaatattgcatctggtacatcagaaaacactaaagttgtgattgattatggttctgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLe0039G15-FcnBD/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C06SLe0039G15.1" temp_strand="+" temp_description="C06SLe0039G15.1  AC216657.1 htgs_phase:1 submitted_to_sgn_as:C06SLe0039G15 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="15743" stop="19152"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16032" g_stop="16294" g_length="263"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="260" r_length="260" r_score="0.981"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16295" i_stop="18369" i_length="2075">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.971" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18370" g_stop="18466" g_length="97"/>
          <reference_exon_boundary r_type="cDNA" r_start="261" r_stop="357" r_length="97" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="18467" i_stop="18590" i_length="124">
            <donor d_prob="0.851" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="18591" g_stop="18682" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="358" r_stop="449" r_length="92" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="18683" i_stop="18772" i_length="90">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.967" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="18773" g_stop="18852" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="450" r_stop="529" r_length="80" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLe0039G15.1" gen_strand="+" ref_id="SGN-E331824" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>532</cumulative_length_of_scored_exons>
        <coverage percentage="1.006" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLe0039G15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E331824" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16032" e_stop="16294"/>
          <exon e_start="18370" e_stop="18466"/>
          <exon e_start="18591" e_stop="18682"/>
          <exon e_start="18773" e_stop="18852"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAGATTATCGATTATCGAGTTGAGTTCAGAATTTCGATTCACCGGAGCTATGTCACTGAGGCCGAACTCGAGAACGGAGGCTCGCCGGAGCAGGTACAAAGTTGCCGTCGATGCGGAGGAAGGACGGAGAAGAAGGGAAGATAACATGGTTGAGATCCGGAAGAATAAAAGAGAAGAGAATTTGCTTAAGAAGCGTCGTGAAGGTTTACTACAAGCTCAGCAGTTTCCTAGCACTGCTGCTGTTTCTCACCTTGATAAGAAGGTATAGATTTTTTTCGTTGATTAACTTTTAGTTTCTTAGATACATATATTTTGATCGAATTTGATTGTCTGATTTGAATTTTCAAGTGCGATCAATGTTTACTCAGTGTGTGTCCTTGTGAGCTTAATTCGTTACTTCGATTTTTTCGTTTAGTTACTTGCTTCATTCAGTTCTAAACCTCAATTATGCTTAATTGATTCAATTATTTGTTTGAAGTTCAAGTGTGATCACTGTTTACTCGGTTTTCTCTTTTACGAGCTTAGTTCAGTACTTCGTATTTTTTGTTATTTAAATGCTTAATTTAGTTCTTAGATTCACTTATGCTTATTGAAATCAATTATTTGATTGAAATGCAAGTGCGTCAATGTTTACTCTCGGTGTTCGTCCTATCTAAGATAATCGGCTACTTGTATTTTTCGTTATTTAAATGCTTCATTCAGTTCTTACCTTTGCTTATCCTCATTGGATTCAATTGTTTTATCAAGACTAATTCATCTTTAGTTGCAAAGTGCAGCGCCAATTAATACCAAAAAATTAAAATATTTAGTTGCATATATATATATATATATATTATATATATATATATATAAAATCAAAATCTCAATAGAAGTAGCTTTGAAGATGAAGGAGGAGGAGGAGGAAAACGAAACCAAGGAAGAAGGAAAGAAGAAATACGTTGTGGTTGGACTTTGGAGTCGCCGGAAAAGTCTGACTGGTCATTGCCTCACTAGAGAAGTCTAGTCGAGTCGATGGGTTGGAGTCAAGTTGTAGTTTACGAATGCAACTGTGCAAATTTGGAAAGAAAACCCTAAAATTTAACTTTTAAAACACTACATTTTTTTTTTGAAATAGGTAACTTTCTTTTAAAACCTTAAATTGATTGTTTTTTTTTACGAAAATACAAAAAGTGACTCCTTGGTCGCCATGGCGTTGCCTTTTGAAGATCGCCTCGCCACAAAGATAATAGGCGCTGAAGGATCGCCTTGCCTTGCCTCTTGCCATTGATGATGAGACGATTACCTTCCACGACATTGTCTCAGCCGTATGATACCGATAGTGTCATAGGAATCAGTTATTTTATTTGCATGGCAAGTTCTATCAATTTTACATGGTGTCATCATTTCCAGCTTAATTTGCTACGCGTATTAATTACTTGCTCTATTCAGTTCTTAGCCTCACTAGTCCTTATTGAATTCAATTGTTTATTTTAATTGCAAGTGCGATCAAGACTAATTCATCTTTTCTCTTTGAGCTTACTCAGCAGCGTGAATTTTTGTTAACTACTCTCAGTCTTATGATGCAGATATTGTGATCGGTTTCAGTTGCTTTAGTTGAATTGCAAGTGCTATCAATTTTTACTTTCCAGCATAATTTGCTACTTGTTTTTACCTACTTTCTCCATTCAGTTCTTAGCCTCACTAATCCTTATTGGATTCAATTGTGTATTTGAATTGCAACTGCGATCAGGACTAGTTGGTATTGATCATTTCTAGCATTTATTTTCATTAATTACTTGCTTCATTCTGTTCTTAGGCTGAATTATCCAATTCTATTTGCATTCAGTTTCTATTTGAATGGCTAGCGCGATCAATGTTTACTCAGTGTGCATTCTTTCTTCATTCAGTTCTAAGCCTCATTTTTCCTTGATGGATACAATCTTTTATTTGAATTGCTAGTGCAATCAATGGTTACTTGGTATTCATCCTTTCAAGCATAATTGGGTACTATTATTTTTTGGTAATTACCTGCTTCACTCAGTTCTTAAGGATAACTTTTTTTACTTGTTAGAGAAGCATAATGTTTTCAATAGTTAGGTATACAGTCTGCTTTGTTTCTCCCTTGTCCGCAAAGCAAAAATGACATAATCACTATTTGAAGAGTCAAAAAGGTATTTGAAAAATACTATTTAAGAAAAAGGAAGAAATCTATACACTGAAAGATTAGATTAGTTGATTTCTACTTCAAATATAATCATCCTTGCAGCTATGGAGGAGTAGCATTGCGCCAAAAATAATATCATGCTGCTCTAGCAACAAACTTATCTGATTCAATTTTATTGGTTTATAACCTTTCAGCTGGAGACTCTTCCTGAATTGATTGCTGGGGTTTGGTCTGATGACAGCAGTTTGCAACTTGAATGTACAACACAATTCCGGAAACTGCTTTCAATTGGTCAGTGTTGCTTTGCTTTTTCCTAAATGTATTTCTGTTTGATCACCTTGACAATGAATGTTTTTCCTCTCTGTATCTTTGTGTCTTAATTAGTATGCGTGTTCACTTCTGGTTGTTTTGGCAGAACGCAATCCTCCTATAGAGGAAGTGATACAGTCTGGGGTAGTTCCTCGCTTTGTTGAATTTCTTGCTCGAGATGACTATCCTCAACTGCAGGTTTTTTTACAAAATCTATTATTTTTGTTTTTTGTTTTGCAGTTCCATCTTTATTTCTAATGTTTACATAATTGGCATTCTATAATCTAGTTTGAGGCAGCGTGGGCTCTTACAAATATTGCATCTGGTACATCAGAAAACACTAAAGTTGTGATTGATTATGGTTCTGT</genome_strand>
        <mrna_strand>AGAGA-GA-C-AGTATCGAGTTGAGTTCAGAATTTCGATTCACCGGAGCTATGTCACTGAGGCCGAACTCGAGAACGGAGGCTCGCCGGAGCAGGTACAAAGTTGCCGTCGATGCGGAGGAAGGACGGAGAAGAAGGGAAGATAACATGGTTGAGATCCGGAAGAATAAAAGAGAAGAGAATTTGCTTAAGAAGCGTCGTGAAGGTTTACTACAAGCTCAGCAGTTTCCTAGCACTGCTGCTGTTTCTCACCTTGATAAGAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGAGACTCTTCCTGAATTGATTGCTGGGGTTTGGTCTGATGACAGCAGTTTGCAACTTGAATGTACAACACAATTCCGGAAACTGCTTTCAATTG............................................................................................................................AACGCAATCCTCCTATAGAGGAAGTGATACAGTCTGGGGTAGTTCCTCGCTTTGTTGAATTTCTTGCTCGAGATGACTATCCTCAACTGCAG..........................................................................................TTTGAGGCAGCGTGGGCTCTTACAAATATTGCATCTGGTACATCAGAAAACACTAAAGTTGTGATTGATTATGGTTCTGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLe0039G15-FcnBD/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E691240" ref_strand="+" ref_description="SGN-E691240 [LH_Ea05J14]">
      <seq>cgttattatcgagttgagttcagaatttcgattcaccggagctatgtcactgaggccgaactcgagaacggaggctcgccggagcaggtacaaagttgccgtagatgcggaggaaggacggagaagaagggaagataacatggttgagatccggaagaataaaagagaagagaatttgcttaagaagcgtcgtgaaggtttactacaagctcagcagtttcctagcactgctgctgtttctcaccttgataagaagctggagactcttcctgaattgattgctggggtttggtctgatgacagcagtttgcaacttgaatgtacaacacaattccggaaactgctttcaattgaacgcaatcctcctatagaggaagtgatacagtctggggtagttcctcgctttgttgaatttcttgctcgagatgactatcatcaactgcaggtttttttacaaaatctattatttttgttttttgttttgcagttcatctttatttctaatgttcacataattggcatcctataatctagtttgaggcagcgtgggctcttacaaatattgcgtctggtacatcagaaaacactaaagttgtgattgattatggttctgtcccaattttcatcagacttctaagttcaccaagtgatgatgtccgtgaacaggcagtttgggctttgggaaatattgctggtgactcacccaagtatcgtgaccttgtgcttggccatggagctttagcggcattgctggcacaatttaatgagcaggcaaagctatctatgttgagaaatgctacctggacattgtcaaacttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLe0039G15-FcnBD/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C06SLe0039G15.1" temp_strand="+" temp_description="C06SLe0039G15.1  AC216657.1 htgs_phase:1 submitted_to_sgn_as:C06SLe0039G15 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="15743" stop="19635"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16039" g_stop="16294" g_length="256"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="256" r_length="256" r_score="0.980"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16295" i_stop="18369" i_length="2075">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.971" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18370" g_stop="18466" g_length="97"/>
          <reference_exon_boundary r_type="cDNA" r_start="257" r_stop="353" r_length="97" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="18467" i_stop="18590" i_length="124">
            <donor d_prob="0.851" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="18591" g_stop="18904" g_length="314"/>
          <reference_exon_boundary r_type="cDNA" r_start="354" r_stop="666" r_length="313" r_score="0.984"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="18905" i_stop="19182" i_length="278">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="19183" g_stop="19335" g_length="153"/>
          <reference_exon_boundary r_type="cDNA" r_start="667" r_stop="819" r_length="153" r_score="0.980"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLe0039G15.1" gen_strand="+" ref_id="SGN-E691240" ref_strand="+">
        <total_alignment_score>0.984</total_alignment_score>
        <cumulative_length_of_scored_exons>820</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLe0039G15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E691240" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16039" e_stop="16294"/>
          <exon e_start="18370" e_stop="18466"/>
          <exon e_start="18591" e_stop="18904"/>
          <exon e_start="19183" e_stop="19335"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCGATTATCGAGTTGAGTTCAGAATTTCGATTCACCGGAGCTATGTCACTGAGGCCGAACTCGAGAACGGAGGCTCGCCGGAGCAGGTACAAAGTTGCCGTCGATGCGGAGGAAGGACGGAGAAGAAGGGAAGATAACATGGTTGAGATCCGGAAGAATAAAAGAGAAGAGAATTTGCTTAAGAAGCGTCGTGAAGGTTTACTACAAGCTCAGCAGTTTCCTAGCACTGCTGCTGTTTCTCACCTTGATAAGAAGGTATAGATTTTTTTCGTTGATTAACTTTTAGTTTCTTAGATACATATATTTTGATCGAATTTGATTGTCTGATTTGAATTTTCAAGTGCGATCAATGTTTACTCAGTGTGTGTCCTTGTGAGCTTAATTCGTTACTTCGATTTTTTCGTTTAGTTACTTGCTTCATTCAGTTCTAAACCTCAATTATGCTTAATTGATTCAATTATTTGTTTGAAGTTCAAGTGTGATCACTGTTTACTCGGTTTTCTCTTTTACGAGCTTAGTTCAGTACTTCGTATTTTTTGTTATTTAAATGCTTAATTTAGTTCTTAGATTCACTTATGCTTATTGAAATCAATTATTTGATTGAAATGCAAGTGCGTCAATGTTTACTCTCGGTGTTCGTCCTATCTAAGATAATCGGCTACTTGTATTTTTCGTTATTTAAATGCTTCATTCAGTTCTTACCTTTGCTTATCCTCATTGGATTCAATTGTTTTATCAAGACTAATTCATCTTTAGTTGCAAAGTGCAGCGCCAATTAATACCAAAAAATTAAAATATTTAGTTGCATATATATATATATATATATTATATATATATATATATAAAATCAAAATCTCAATAGAAGTAGCTTTGAAGATGAAGGAGGAGGAGGAGGAAAACGAAACCAAGGAAGAAGGAAAGAAGAAATACGTTGTGGTTGGACTTTGGAGTCGCCGGAAAAGTCTGACTGGTCATTGCCTCACTAGAGAAGTCTAGTCGAGTCGATGGGTTGGAGTCAAGTTGTAGTTTACGAATGCAACTGTGCAAATTTGGAAAGAAAACCCTAAAATTTAACTTTTAAAACACTACATTTTTTTTTTGAAATAGGTAACTTTCTTTTAAAACCTTAAATTGATTGTTTTTTTTTACGAAAATACAAAAAGTGACTCCTTGGTCGCCATGGCGTTGCCTTTTGAAGATCGCCTCGCCACAAAGATAATAGGCGCTGAAGGATCGCCTTGCCTTGCCTCTTGCCATTGATGATGAGACGATTACCTTCCACGACATTGTCTCAGCCGTATGATACCGATAGTGTCATAGGAATCAGTTATTTTATTTGCATGGCAAGTTCTATCAATTTTACATGGTGTCATCATTTCCAGCTTAATTTGCTACGCGTATTAATTACTTGCTCTATTCAGTTCTTAGCCTCACTAGTCCTTATTGAATTCAATTGTTTATTTTAATTGCAAGTGCGATCAAGACTAATTCATCTTTTCTCTTTGAGCTTACTCAGCAGCGTGAATTTTTGTTAACTACTCTCAGTCTTATGATGCAGATATTGTGATCGGTTTCAGTTGCTTTAGTTGAATTGCAAGTGCTATCAATTTTTACTTTCCAGCATAATTTGCTACTTGTTTTTACCTACTTTCTCCATTCAGTTCTTAGCCTCACTAATCCTTATTGGATTCAATTGTGTATTTGAATTGCAACTGCGATCAGGACTAGTTGGTATTGATCATTTCTAGCATTTATTTTCATTAATTACTTGCTTCATTCTGTTCTTAGGCTGAATTATCCAATTCTATTTGCATTCAGTTTCTATTTGAATGGCTAGCGCGATCAATGTTTACTCAGTGTGCATTCTTTCTTCATTCAGTTCTAAGCCTCATTTTTCCTTGATGGATACAATCTTTTATTTGAATTGCTAGTGCAATCAATGGTTACTTGGTATTCATCCTTTCAAGCATAATTGGGTACTATTATTTTTTGGTAATTACCTGCTTCACTCAGTTCTTAAGGATAACTTTTTTTACTTGTTAGAGAAGCATAATGTTTTCAATAGTTAGGTATACAGTCTGCTTTGTTTCTCCCTTGTCCGCAAAGCAAAAATGACATAATCACTATTTGAAGAGTCAAAAAGGTATTTGAAAAATACTATTTAAGAAAAAGGAAGAAATCTATACACTGAAAGATTAGATTAGTTGATTTCTACTTCAAATATAATCATCCTTGCAGCTATGGAGGAGTAGCATTGCGCCAAAAATAATATCATGCTGCTCTAGCAACAAACTTATCTGATTCAATTTTATTGGTTTATAACCTTTCAGCTGGAGACTCTTCCTGAATTGATTGCTGGGGTTTGGTCTGATGACAGCAGTTTGCAACTTGAATGTACAACACAATTCCGGAAACTGCTTTCAATTGGTCAGTGTTGCTTTGCTTTTTCCTAAATGTATTTCTGTTTGATCACCTTGACAATGAATGTTTTTCCTCTCTGTATCTTTGTGTCTTAATTAGTATGCGTGTTCACTTCTGGTTGTTTTGGCAGAACGCAATCCTCCTATAGAGGAAGTGATACAGTCTGGGGTAGTTCCTCGCTTTGTTGAATTTCTTGCTCGAGATGACTATCCTCAACTGCAGGTTTTTTTACAAAATCTATTATTTTTGTTTTTTGTTTTGCAGTTCCATCTTTATTTCTAATGTTTACATAATTGGCATTCTATAATCTAGTTTGAGGCAGCGTGGGCTCTTACAAATATTGCATCTGGTACATCAGAAAACACTAAAGTTGTGATTGATTATGGTTCTGTCCCAATTTTCATCAGACTTCTAAGTTCACCAAGTGATGATGTCCGTGAACAGGTAAAACTTTATATATAAGAGGGCTAAGCTTTCATGTTTCTTCTCATAATTGTCATGATATTATGTCTATTTTTCTTAAAAAAATTGGGGTTACGGGAAGGAGTAATGGGGGAGAGAATTACAAAGTGGAAATCAAACCCTCACTGGCAAGATGAAAGTTCAAGTATTCAACCAACTTAGCTACTAAGATTCTCCTGATATTGTATGTATTATGCCAATTTATTTCTGAGAAGTTAAAAATTCTTTTATTTTGATATTTTTTTTAAAAAAATTTATAGGCCGTTTGGGCTTTGGGAAATATTGCTGGTGACTCGCCCAAGTATCGTGACCTTGTGCTTGGCCATGGAGCTTTAGTGGCATTGCTGGCACAATTTAATGAGCAGGCAAAGCTATCTATGTTGAGAAATGCTACCTGGACATTGTCAAACTTT</genome_strand>
        <mrna_strand>CGTTATTATCGAGTTGAGTTCAGAATTTCGATTCACCGGAGCTATGTCACTGAGGCCGAACTCGAGAACGGAGGCTCGCCGGAGCAGGTACAAAGTTGCCGTAGATGCGGAGGAAGGACGGAGAAGAAGGGAAGATAACATGGTTGAGATCCGGAAGAATAAAAGAGAAGAGAATTTGCTTAAGAAGCGTCGTGAAGGTTTACTACAAGCTCAGCAGTTTCCTAGCACTGCTGCTGTTTCTCACCTTGATAAGAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGAGACTCTTCCTGAATTGATTGCTGGGGTTTGGTCTGATGACAGCAGTTTGCAACTTGAATGTACAACACAATTCCGGAAACTGCTTTCAATTG............................................................................................................................AACGCAATCCTCCTATAGAGGAAGTGATACAGTCTGGGGTAGTTCCTCGCTTTGTTGAATTTCTTGCTCGAGATGACTATCATCAACTGCAGGTTTTTTTACAAAATCTATTATTTTTGTTTTTTGTTTTGCAGTT-CATCTTTATTTCTAATGTTCACATAATTGGCATCCTATAATCTAGTTTGAGGCAGCGTGGGCTCTTACAAATATTGCGTCTGGTACATCAGAAAACACTAAAGTTGTGATTGATTATGGTTCTGTCCCAATTTTCATCAGACTTCTAAGTTCACCAAGTGATGATGTCCGTGAACAG......................................................................................................................................................................................................................................................................................GCAGTTTGGGCTTTGGGAAATATTGCTGGTGACTCACCCAAGTATCGTGACCTTGTGCTTGGCCATGGAGCTTTAGCGGCATTGCTGGCACAATTTAATGAGCAGGCAAAGCTATCTATGTTGAGAAATGCTACCTGGACATTGTCAAACTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLe0039G15-FcnBD/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E747650" ref_strand="+" ref_description="SGN-E747650 [GI|3228369]">
      <seq>atgtcactgaggccgaactcgagaacggaggctcgccggagcaggtacaaagttgccgtcgatgcggaggaaggacggagaagaagggaagataacatggttgagatccggaagaataaaagagaagagaatttgcttaagaagcgtcgtgaaggtttactacaagctcagcagtttcctagcactgctgctgtttctcaccttgataagaagctggagactcttcctgaattgattgctggggtttggtctgatgacagcagtttgcaacttgaatgtacaacacaattccggaaactgctttcaattgaacgcaatcctcctatagaggaagtgatacagtctggggtagttcctcgctttgttgaatttcttgctcgagatgactatcctcaactgcagtttgaggcagcgtgggctcttacaaatattgcatctggtacatcagaaaacactaaagttgtgattgattatggttctgtcccaattttcatcagacttctaagttcaccaagtgatgatgtccgtgaacaggccgtttgggctttgggaaatattgctggtgactcgcccaagtatcgtgaccttgtgcttggccatggagctttagtggcattgctggcacaatttaatgagcaggcaaagctatctatgttgagaaatgctacctggacattgtcaaacttttgtaggggaaaacctcagccactgttcgagcagacaaaagcggcactccccactcttggtcgccttatccactcaaatgatgaagaagtcttgacagatgcatgctgggctctttcatatctttctgatggaactaatgacaaaatccaggctgttattgaagctggagtgtgttcccgccttgttgagctgctacttcattcttcaccatctgttctcattcctgccttgcgcactgttggtaacatagtcacaggagacgatatccaaactcaggttatgattgaccatcatgctcttccctgccttgttaacctgttgacgcaaaattacaaaaaaagcattaaaaaggaagcttgttggacaatctcgaacattacagctggtaatagaaatcaaattcagattgtgatcgaggctggcattattgcccctcttgtatatctgctacaaaatgctgaatttgagataaagaaagaggctgcttgggcaatttcaaatgctacgtccggtggaaatcatgatcaaatcaagttcttggtgagccaaggttgtataaaaccattgtgtgatcttctggtatgtcctgacccaagaattgtcactgtctgcttggaagggcttgagaatattctgaagattggggaagctgataaggatctaggaaacacagaaggcgtgaatgtttatgcccagttaatcgacgaggctgaaggtctagaaaagattgaaaacctccaaagccatgacaacactgaaatctatgagaaagcagtgaagatcctcgaaacttattggttggaggaggaagatgtgccggtttcattaaatgaagatcaattcgaatttggaggggccgatatatctcttccatcgggaggatttaacttcagttgatggggtttggctagcaggtcagtgagtggttttaaattggagaaacatcctctttaaactatgtgtagagagagttgtcatctacttgggggaggtttggattttacatatattttcttctatttattgatggagttggtgttgtataagttactttttcccctagactagacatattggtggtggtggatatatatatgtatacatgttaatgtacaagtcatacgtgggctctccatgacattatttggtgtaaacatatacttgtttccatctttttgtacccttatatggcttgtttccatctctgtaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLe0039G15-FcnBD/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C06SLe0039G15.1" temp_strand="+" temp_description="C06SLe0039G15.1  AC216657.1 htgs_phase:1 submitted_to_sgn_as:C06SLe0039G15 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="15782" stop="22331"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16082" g_stop="16294" g_length="213"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="213" r_length="213" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16295" i_stop="18369" i_length="2075">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.971" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18370" g_stop="18466" g_length="97"/>
          <reference_exon_boundary r_type="cDNA" r_start="214" r_stop="310" r_length="97" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="18467" i_stop="18590" i_length="124">
            <donor d_prob="0.851" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="18591" g_stop="18682" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="311" r_stop="402" r_length="92" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="18683" i_stop="18772" i_length="90">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.967" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="18773" g_stop="18904" g_length="132"/>
          <reference_exon_boundary r_type="cDNA" r_start="403" r_stop="534" r_length="132" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="18905" i_stop="19182" i_length="278">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="19183" g_stop="19368" g_length="186"/>
          <reference_exon_boundary r_type="cDNA" r_start="535" r_stop="720" r_length="186" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="19369" i_stop="19455" i_length="87">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.958" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="19456" g_stop="19619" g_length="164"/>
          <reference_exon_boundary r_type="cDNA" r_start="721" r_stop="884" r_length="164" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="19620" i_stop="19715" i_length="96">
            <donor d_prob="0.914" d_score="1.00"/>
            <acceptor a_prob="0.500" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="19716" g_stop="19794" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="885" r_stop="963" r_length="79" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="19795" i_stop="20646" i_length="852">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.941" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="20647" g_stop="20775" g_length="129"/>
          <reference_exon_boundary r_type="cDNA" r_start="964" r_stop="1092" r_length="129" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="20776" i_stop="20910" i_length="135">
            <donor d_prob="0.969" d_score="1.00"/>
            <acceptor a_prob="0.976" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="20911" g_stop="21038" g_length="128"/>
          <reference_exon_boundary r_type="cDNA" r_start="1093" r_stop="1220" r_length="128" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="21039" i_stop="21118" i_length="80">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.763" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="21119" g_stop="21486" g_length="368"/>
          <reference_exon_boundary r_type="cDNA" r_start="1221" r_stop="1588" r_length="368" r_score="1.000"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="21487" i_stop="21723" i_length="237">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="21724" g_stop="22028" g_length="305"/>
          <reference_exon_boundary r_type="cDNA" r_start="1589" r_stop="1893" r_length="305" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="1896" polyA_stop="1907"/>
      <MATCH_line gen_id="C06SLe0039G15.1" gen_strand="+" ref_id="SGN-E747650" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>1893</cumulative_length_of_scored_exons>
        <coverage percentage="0.993" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLe0039G15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E747650" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16082" e_stop="16294"/>
          <exon e_start="18370" e_stop="18466"/>
          <exon e_start="18591" e_stop="18682"/>
          <exon e_start="18773" e_stop="18904"/>
          <exon e_start="19183" e_stop="19368"/>
          <exon e_start="19456" e_stop="19619"/>
          <exon e_start="19716" e_stop="19794"/>
          <exon e_start="20647" e_stop="20775"/>
          <exon e_start="20911" e_stop="21038"/>
          <exon e_start="21119" e_stop="21486"/>
          <exon e_start="21724" e_stop="22028"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGTCACTGAGGCCGAACTCGAGAACGGAGGCTCGCCGGAGCAGGTACAAAGTTGCCGTCGATGCGGAGGAAGGACGGAGAAGAAGGGAAGATAACATGGTTGAGATCCGGAAGAATAAAAGAGAAGAGAATTTGCTTAAGAAGCGTCGTGAAGGTTTACTACAAGCTCAGCAGTTTCCTAGCACTGCTGCTGTTTCTCACCTTGATAAGAAGGTATAGATTTTTTTCGTTGATTAACTTTTAGTTTCTTAGATACATATATTTTGATCGAATTTGATTGTCTGATTTGAATTTTCAAGTGCGATCAATGTTTACTCAGTGTGTGTCCTTGTGAGCTTAATTCGTTACTTCGATTTTTTCGTTTAGTTACTTGCTTCATTCAGTTCTAAACCTCAATTATGCTTAATTGATTCAATTATTTGTTTGAAGTTCAAGTGTGATCACTGTTTACTCGGTTTTCTCTTTTACGAGCTTAGTTCAGTACTTCGTATTTTTTGTTATTTAAATGCTTAATTTAGTTCTTAGATTCACTTATGCTTATTGAAATCAATTATTTGATTGAAATGCAAGTGCGTCAATGTTTACTCTCGGTGTTCGTCCTATCTAAGATAATCGGCTACTTGTATTTTTCGTTATTTAAATGCTTCATTCAGTTCTTACCTTTGCTTATCCTCATTGGATTCAATTGTTTTATCAAGACTAATTCATCTTTAGTTGCAAAGTGCAGCGCCAATTAATACCAAAAAATTAAAATATTTAGTTGCATATATATATATATATATATTATATATATATATATATAAAATCAAAATCTCAATAGAAGTAGCTTTGAAGATGAAGGAGGAGGAGGAGGAAAACGAAACCAAGGAAGAAGGAAAGAAGAAATACGTTGTGGTTGGACTTTGGAGTCGCCGGAAAAGTCTGACTGGTCATTGCCTCACTAGAGAAGTCTAGTCGAGTCGATGGGTTGGAGTCAAGTTGTAGTTTACGAATGCAACTGTGCAAATTTGGAAAGAAAACCCTAAAATTTAACTTTTAAAACACTACATTTTTTTTTTGAAATAGGTAACTTTCTTTTAAAACCTTAAATTGATTGTTTTTTTTTACGAAAATACAAAAAGTGACTCCTTGGTCGCCATGGCGTTGCCTTTTGAAGATCGCCTCGCCACAAAGATAATAGGCGCTGAAGGATCGCCTTGCCTTGCCTCTTGCCATTGATGATGAGACGATTACCTTCCACGACATTGTCTCAGCCGTATGATACCGATAGTGTCATAGGAATCAGTTATTTTATTTGCATGGCAAGTTCTATCAATTTTACATGGTGTCATCATTTCCAGCTTAATTTGCTACGCGTATTAATTACTTGCTCTATTCAGTTCTTAGCCTCACTAGTCCTTATTGAATTCAATTGTTTATTTTAATTGCAAGTGCGATCAAGACTAATTCATCTTTTCTCTTTGAGCTTACTCAGCAGCGTGAATTTTTGTTAACTACTCTCAGTCTTATGATGCAGATATTGTGATCGGTTTCAGTTGCTTTAGTTGAATTGCAAGTGCTATCAATTTTTACTTTCCAGCATAATTTGCTACTTGTTTTTACCTACTTTCTCCATTCAGTTCTTAGCCTCACTAATCCTTATTGGATTCAATTGTGTATTTGAATTGCAACTGCGATCAGGACTAGTTGGTATTGATCATTTCTAGCATTTATTTTCATTAATTACTTGCTTCATTCTGTTCTTAGGCTGAATTATCCAATTCTATTTGCATTCAGTTTCTATTTGAATGGCTAGCGCGATCAATGTTTACTCAGTGTGCATTCTTTCTTCATTCAGTTCTAAGCCTCATTTTTCCTTGATGGATACAATCTTTTATTTGAATTGCTAGTGCAATCAATGGTTACTTGGTATTCATCCTTTCAAGCATAATTGGGTACTATTATTTTTTGGTAATTACCTGCTTCACTCAGTTCTTAAGGATAACTTTTTTTACTTGTTAGAGAAGCATAATGTTTTCAATAGTTAGGTATACAGTCTGCTTTGTTTCTCCCTTGTCCGCAAAGCAAAAATGACATAATCACTATTTGAAGAGTCAAAAAGGTATTTGAAAAATACTATTTAAGAAAAAGGAAGAAATCTATACACTGAAAGATTAGATTAGTTGATTTCTACTTCAAATATAATCATCCTTGCAGCTATGGAGGAGTAGCATTGCGCCAAAAATAATATCATGCTGCTCTAGCAACAAACTTATCTGATTCAATTTTATTGGTTTATAACCTTTCAGCTGGAGACTCTTCCTGAATTGATTGCTGGGGTTTGGTCTGATGACAGCAGTTTGCAACTTGAATGTACAACACAATTCCGGAAACTGCTTTCAATTGGTCAGTGTTGCTTTGCTTTTTCCTAAATGTATTTCTGTTTGATCACCTTGACAATGAATGTTTTTCCTCTCTGTATCTTTGTGTCTTAATTAGTATGCGTGTTCACTTCTGGTTGTTTTGGCAGAACGCAATCCTCCTATAGAGGAAGTGATACAGTCTGGGGTAGTTCCTCGCTTTGTTGAATTTCTTGCTCGAGATGACTATCCTCAACTGCAGGTTTTTTTACAAAATCTATTATTTTTGTTTTTTGTTTTGCAGTTCCATCTTTATTTCTAATGTTTACATAATTGGCATTCTATAATCTAGTTTGAGGCAGCGTGGGCTCTTACAAATATTGCATCTGGTACATCAGAAAACACTAAAGTTGTGATTGATTATGGTTCTGTCCCAATTTTCATCAGACTTCTAAGTTCACCAAGTGATGATGTCCGTGAACAGGTAAAACTTTATATATAAGAGGGCTAAGCTTTCATGTTTCTTCTCATAATTGTCATGATATTATGTCTATTTTTCTTAAAAAAATTGGGGTTACGGGAAGGAGTAATGGGGGAGAGAATTACAAAGTGGAAATCAAACCCTCACTGGCAAGATGAAAGTTCAAGTATTCAACCAACTTAGCTACTAAGATTCTCCTGATATTGTATGTATTATGCCAATTTATTTCTGAGAAGTTAAAAATTCTTTTATTTTGATATTTTTTTTAAAAAAATTTATAGGCCGTTTGGGCTTTGGGAAATATTGCTGGTGACTCGCCCAAGTATCGTGACCTTGTGCTTGGCCATGGAGCTTTAGTGGCATTGCTGGCACAATTTAATGAGCAGGCAAAGCTATCTATGTTGAGAAATGCTACCTGGACATTGTCAAACTTTTGTAGGGGAAAACCTCAGCCACTGTTCGAGCAGGTTTGACTTTAAAGATAAAGTTTGTTTGATCTTTTCAGATATTTATATTACTTTTAAAGGTTATGCCTTTTAAAATTCATCGCGCAGACAAAAGCGGCACTCCCCACTCTTGGTCGCCTTATCCACTCAAATGATGAAGAAGTCTTGACAGATGCATGCTGGGCTCTTTCATATCTTTCTGATGGAACTAATGACAAAATCCAGGCTGTTATTGAAGCTGGAGTGTGTTCCCGCCTTGTTGAGCTGCTACTGTGAGTTATAGATCTTACTTTTGAGGGTTTGTCTTAGGCTTTCGATATGTTAAAATCATAAGTTTCTTACTCCCTTCATCTTTTTTTCGTGAGTAGTCATTCTTCACCATCTGTTCTCATTCCTGCCTTGCGCACTGTTGGTAACATAGTCACAGGAGACGATATCCAAACTCAGGTATTTATCATCCTCCCAGCCAATTTTTCATGTTTGATTTTTTTTTTTCGTTTTTCCCTCTTCTCATCCTTAATTGAGTCTTTGTGTAAACATGAATTCTCAATATCTAATCCATCAGTACGTCAGATGTATCTTCATCTTTTTGTTTAGGTAAATTATGCTGGTCAGATAAAAATACTTAAAAATCTAGCTTTCGTCAATGATAATTCAATTTTTGTAATAATTCTGATAGTCAACTATATCATAATCATGATATGAAAGAAAAGAGGAGTAAAGATTGGCTAGTCAATTAGTTCTCATTAAGTTTCTACCATGTTTAAGAGAGGTTACTCACGGAAGTCTTCGCTAATTCATCCGTGTACTGCAGTCAGTCTTCAGTTATCACGTTTGCCTACCTGAGTAGGGGGTTAGTGGTGTTTGGCTGTTATGATTATTTTTAGAATAAACTTTCCATTGCCGAACTGCTCACTGGGATAGTGTTGCACCACATATTTACGGAACAAATGGTGTTACATCTCTATTTGTTCTTAGGAGAAAAAATAGGGAGAGGAAATTTTCTAAATTTTTGGTCCCTGAAACGTAAGACGAGTGAAATTGAGTTAACTTCTTTGCTATCCTGTTATTCTCCTACCAAGGTAGGGAAGCTCTAATAGGGTAGTATTGTACGGCAGAGGCATGCTCTCTTTCAGTGAGGAGTTATTTGCAACCTTCCATTTTTGTTACCTCTCAGACGTAGTGGAAATAAAATGGACATAAAAACTACATCTTTTGGTTGTTGAAGCAAATTATGTCCTACCTAATTTATCAGCTGGAATCTTTTTTGGTGGACATTGATGAATCTATATTGTTTAGGTTATGATTGACCATCATGCTCTTCCCTGCCTTGTTAACCTGTTGACGCAAAATTACAAAAAAAGCATTAAAAAGGAAGCTTGTTGGACAATCTCGAACATTACAGCTGGTAATAGAAATCAAATTCAGGTATGTTGTATGGTAATTGACAATTTGTGCTTCTTTATCAATTGACAGAGAACTGAAAATAAGTGAAGAAAGAGAACCTTTGCAAGATGATTCAGTTTTGTATAATGATACTGAAAGGGGTTTTAATTGAAATAGATTGTGATCGAGGCTGGCATTATTGCCCCTCTTGTATATCTGCTACAAAATGCTGAATTTGAGATAAAGAAAGAGGCTGCTTGGGCAATTTCAAATGCTACGTCCGGTGGAAATCATGATCAAATCAAGTATGGTTCCTTTAGCATATTCAGTTTCATCTGCTTAACCTTACATCTAGTTTGAAGCTCACATGTAAATTGATTTCTAGGTTCTTGGTGAGCCAAGGTTGTATAAAACCATTGTGTGATCTTCTGGTATGTCCTGACCCAAGAATTGTCACTGTCTGCTTGGAAGGGCTTGAGAATATTCTGAAGATTGGGGAAGCTGATAAGGATCTAGGAAACACAGAAGGCGTGAATGTTTATGCCCAGTTAATCGACGAGGCTGAAGGTCTAGAAAAGATTGAAAACCTCCAAAGCCATGACAACACTGAAATCTATGAGAAAGCAGTGAAGATCCTCGAAACTTATTGGTTGGAGGAGGAAGATGTGCCGGTTTCATTAAATGAAGATCAATTCGAATTTGGAGGGGCCGATATATCTCTTCCATCGGGAGGATTTAACTTCAGTTGATGGGGTATGTTATTCTTCCCTTCTTTTTTATGATTATTTCCCCTCTGTTAACGACGGTTTCCTTTGAAAACTTTTGTTCTTTTGAGCACCTGTTTTATGGTGTAAATTATTTAGCATTAGGATGTGTTAAAATGGTGTTTGAGCGATGATGTAAAGCTAGTCAACCTTACCTTTGATTTAGCAAAAATGGTTTGTTGCAGTTAAAACTTGTGGTAGTTTCTTAATGTTTAATTCTTTCCAGGTTTGGCTAGCAGGTCAGTGAGTGGTTTTAAATTGGAGAAACATCCTCTTTAAACTATGTGTAGAGAGAGTTGTCATCTACTTGGGGGAGGTTTGGATTTTACATATATTTTCTTCTATTTATTGATGGAGTTGGTGTTGTATAAGTTACTTTTTCCCCTAGACTAGACATATTGGTGGTGGTGGATATATATATGTATACATGTTAATGTACAAGTCATACGTGGGCTCTCCATGACATTATTTGGTGTAAACATATACTTGTTTCCATCTTTTTGTACCCTTATATGGCTTGTTTCCATCTCT</genome_strand>
        <mrna_strand>ATGTCACTGAGGCCGAACTCGAGAACGGAGGCTCGCCGGAGCAGGTACAAAGTTGCCGTCGATGCGGAGGAAGGACGGAGAAGAAGGGAAGATAACATGGTTGAGATCCGGAAGAATAAAAGAGAAGAGAATTTGCTTAAGAAGCGTCGTGAAGGTTTACTACAAGCTCAGCAGTTTCCTAGCACTGCTGCTGTTTCTCACCTTGATAAGAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGAGACTCTTCCTGAATTGATTGCTGGGGTTTGGTCTGATGACAGCAGTTTGCAACTTGAATGTACAACACAATTCCGGAAACTGCTTTCAATTG............................................................................................................................AACGCAATCCTCCTATAGAGGAAGTGATACAGTCTGGGGTAGTTCCTCGCTTTGTTGAATTTCTTGCTCGAGATGACTATCCTCAACTGCAG..........................................................................................TTTGAGGCAGCGTGGGCTCTTACAAATATTGCATCTGGTACATCAGAAAACACTAAAGTTGTGATTGATTATGGTTCTGTCCCAATTTTCATCAGACTTCTAAGTTCACCAAGTGATGATGTCCGTGAACAG......................................................................................................................................................................................................................................................................................GCCGTTTGGGCTTTGGGAAATATTGCTGGTGACTCGCCCAAGTATCGTGACCTTGTGCTTGGCCATGGAGCTTTAGTGGCATTGCTGGCACAATTTAATGAGCAGGCAAAGCTATCTATGTTGAGAAATGCTACCTGGACATTGTCAAACTTTTGTAGGGGAAAACCTCAGCCACTGTTCGAGCAG.......................................................................................ACAAAAGCGGCACTCCCCACTCTTGGTCGCCTTATCCACTCAAATGATGAAGAAGTCTTGACAGATGCATGCTGGGCTCTTTCATATCTTTCTGATGGAACTAATGACAAAATCCAGGCTGTTATTGAAGCTGGAGTGTGTTCCCGCCTTGTTGAGCTGCTACT................................................................................................TCATTCTTCACCATCTGTTCTCATTCCTGCCTTGCGCACTGTTGGTAACATAGTCACAGGAGACGATATCCAAACTCAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTATGATTGACCATCATGCTCTTCCCTGCCTTGTTAACCTGTTGACGCAAAATTACAAAAAAAGCATTAAAAAGGAAGCTTGTTGGACAATCTCGAACATTACAGCTGGTAATAGAAATCAAATTCAG.......................................................................................................................................ATTGTGATCGAGGCTGGCATTATTGCCCCTCTTGTATATCTGCTACAAAATGCTGAATTTGAGATAAAGAAAGAGGCTGCTTGGGCAATTTCAAATGCTACGTCCGGTGGAAATCATGATCAAATCAA................................................................................GTTCTTGGTGAGCCAAGGTTGTATAAAACCATTGTGTGATCTTCTGGTATGTCCTGACCCAAGAATTGTCACTGTCTGCTTGGAAGGGCTTGAGAATATTCTGAAGATTGGGGAAGCTGATAAGGATCTAGGAAACACAGAAGGCGTGAATGTTTATGCCCAGTTAATCGACGAGGCTGAAGGTCTAGAAAAGATTGAAAACCTCCAAAGCCATGACAACACTGAAATCTATGAGAAAGCAGTGAAGATCCTCGAAACTTATTGGTTGGAGGAGGAAGATGTGCCGGTTTCATTAAATGAAGATCAATTCGAATTTGGAGGGGCCGATATATCTCTTCCATCGGGAGGATTTAACTTCAGTTGATGGG.............................................................................................................................................................................................................................................GTTTGGCTAGCAGGTCAGTGAGTGGTTTTAAATTGGAGAAACATCCTCTTTAAACTATGTGTAGAGAGAGTTGTCATCTACTTGGGGGAGGTTTGGATTTTACATATATTTTCTTCTATTTATTGATGGAGTTGGTGTTGTATAAGTTACTTTTTCCCCTAGACTAGACATATTGGTGGTGGTGGATATATATATGTATACATGTTAATGTACAAGTCATACGTGGGCTCTCCATGACATTATTTGGTGTAAACATATACTTGTTTCCATCTTTTTGTACCCTTATATGGCTTGTTTCCATCTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLe0039G15-FcnBD/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E345253" ref_strand="+" ref_description="SGN-E345253 [cTOF-13-B15]">
      <seq>aattgattgctggggtttggtctgatgacagcagtttgcaacttgaatgtacaacacaattccggaaactgctttcaattgaacgcaatcctcctatagaggaagtgatacagtctggggtagttcctcgctttgttgaatttcttgctcgagatgactatcctcaactgcagtttgaggcagcgtgggctcttacaaatattgcatctggtacatcagaaaacactaaagttgtgattgattatggttctgtcccaattttcatcagacttctaagttcaccaagtgatgatgtccgtgaacaggccgtttgggctttgggaaatattgctggtgactcgcccaagtatcgtgaccttgtgcttggccatggagctttagtggcattgctggcacaatttaatgagcaggcaaagctatctatgttgagaaatgctacctggacattgtcaaacttttgtaggggaaaacctcagccactgttcgagcagacaaaagcggcactccccactcttggtcgccttatccactcaaatgatgaagaagtcttgacagatgcatgctgggctcttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLe0039G15-FcnBD/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C06SLe0039G15.1" temp_strand="+" temp_description="C06SLe0039G15.1  AC216657.1 htgs_phase:1 submitted_to_sgn_as:C06SLe0039G15 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="18086" stop="19837"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="18386" g_stop="18466" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="81" r_length="81" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="18467" i_stop="18590" i_length="124">
            <donor d_prob="0.851" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18591" g_stop="18682" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="82" r_stop="173" r_length="92" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="18683" i_stop="18772" i_length="90">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.967" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="18773" g_stop="18904" g_length="132"/>
          <reference_exon_boundary r_type="cDNA" r_start="174" r_stop="305" r_length="132" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="18905" i_stop="19182" i_length="278">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="19183" g_stop="19368" g_length="186"/>
          <reference_exon_boundary r_type="cDNA" r_start="306" r_stop="491" r_length="186" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="19369" i_stop="19455" i_length="87">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.958" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="19456" g_stop="19537" g_length="82"/>
          <reference_exon_boundary r_type="cDNA" r_start="492" r_stop="573" r_length="82" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLe0039G15.1" gen_strand="+" ref_id="SGN-E345253" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>573</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLe0039G15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E345253" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="18386" e_stop="18466"/>
          <exon e_start="18591" e_stop="18682"/>
          <exon e_start="18773" e_stop="18904"/>
          <exon e_start="19183" e_stop="19368"/>
          <exon e_start="19456" e_stop="19537"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATTGATTGCTGGGGTTTGGTCTGATGACAGCAGTTTGCAACTTGAATGTACAACACAATTCCGGAAACTGCTTTCAATTGGTCAGTGTTGCTTTGCTTTTTCCTAAATGTATTTCTGTTTGATCACCTTGACAATGAATGTTTTTCCTCTCTGTATCTTTGTGTCTTAATTAGTATGCGTGTTCACTTCTGGTTGTTTTGGCAGAACGCAATCCTCCTATAGAGGAAGTGATACAGTCTGGGGTAGTTCCTCGCTTTGTTGAATTTCTTGCTCGAGATGACTATCCTCAACTGCAGGTTTTTTTACAAAATCTATTATTTTTGTTTTTTGTTTTGCAGTTCCATCTTTATTTCTAATGTTTACATAATTGGCATTCTATAATCTAGTTTGAGGCAGCGTGGGCTCTTACAAATATTGCATCTGGTACATCAGAAAACACTAAAGTTGTGATTGATTATGGTTCTGTCCCAATTTTCATCAGACTTCTAAGTTCACCAAGTGATGATGTCCGTGAACAGGTAAAACTTTATATATAAGAGGGCTAAGCTTTCATGTTTCTTCTCATAATTGTCATGATATTATGTCTATTTTTCTTAAAAAAATTGGGGTTACGGGAAGGAGTAATGGGGGAGAGAATTACAAAGTGGAAATCAAACCCTCACTGGCAAGATGAAAGTTCAAGTATTCAACCAACTTAGCTACTAAGATTCTCCTGATATTGTATGTATTATGCCAATTTATTTCTGAGAAGTTAAAAATTCTTTTATTTTGATATTTTTTTTAAAAAAATTTATAGGCCGTTTGGGCTTTGGGAAATATTGCTGGTGACTCGCCCAAGTATCGTGACCTTGTGCTTGGCCATGGAGCTTTAGTGGCATTGCTGGCACAATTTAATGAGCAGGCAAAGCTATCTATGTTGAGAAATGCTACCTGGACATTGTCAAACTTTTGTAGGGGAAAACCTCAGCCACTGTTCGAGCAGGTTTGACTTTAAAGATAAAGTTTGTTTGATCTTTTCAGATATTTATATTACTTTTAAAGGTTATGCCTTTTAAAATTCATCGCGCAGACAAAAGCGGCACTCCCCACTCTTGGTCGCCTTATCCACTCAAATGATGAAGAAGTCTTGACAGATGCATGCTGGGCTCTTT</genome_strand>
        <mrna_strand>AATTGATTGCTGGGGTTTGGTCTGATGACAGCAGTTTGCAACTTGAATGTACAACACAATTCCGGAAACTGCTTTCAATTG............................................................................................................................AACGCAATCCTCCTATAGAGGAAGTGATACAGTCTGGGGTAGTTCCTCGCTTTGTTGAATTTCTTGCTCGAGATGACTATCCTCAACTGCAG..........................................................................................TTTGAGGCAGCGTGGGCTCTTACAAATATTGCATCTGGTACATCAGAAAACACTAAAGTTGTGATTGATTATGGTTCTGTCCCAATTTTCATCAGACTTCTAAGTTCACCAAGTGATGATGTCCGTGAACAG......................................................................................................................................................................................................................................................................................GCCGTTTGGGCTTTGGGAAATATTGCTGGTGACTCGCCCAAGTATCGTGACCTTGTGCTTGGCCATGGAGCTTTAGTGGCATTGCTGGCACAATTTAATGAGCAGGCAAAGCTATCTATGTTGAGAAATGCTACCTGGACATTGTCAAACTTTTGTAGGGGAAAACCTCAGCCACTGTTCGAGCAG.......................................................................................ACAAAAGCGGCACTCCCCACTCTTGGTCGCCTTATCCACTCAAATGATGAAGAAGTCTTGACAGATGCATGCTGGGCTCTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLe0039G15-FcnBD/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E245891" ref_strand="+" ref_description="SGN-E245891 [cLEF-51-I22]">
      <seq>agtttgcaacttgaatgtacaacacaattccggaaactgctttcaattgaacgcaatcctcctatagaggaagtgatacagtctggggtagttcctcgctttgttgaatttcttgctcgagatgactatcctcaactgcagtttgaggcagcgtgggctcttacaaatattgcatctggtacatcagaaaacactaaagttgtgattgattatggttctgtcccaattttcatcagacttctaagttcaccaagtgatgatgtccgtgaacaggccgtttgggctttgggaaatattgctggtgactcgcccaagtatcgtgaccttgtgcttggccatggagctttagtggcattgctggcccaatttaatgagcaggcaaagctatctatgttgagaaatgctacctggacattgtcaaacttttgtaggggaaaacc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLe0039G15-FcnBD/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C06SLe0039G15.1" temp_strand="+" temp_description="C06SLe0039G15.1  AC216657.1 htgs_phase:1 submitted_to_sgn_as:C06SLe0039G15 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="18118" stop="19649"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="18418" g_stop="18466" g_length="49"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="49" r_length="49" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="18467" i_stop="18590" i_length="124">
            <donor d_prob="0.851" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18591" g_stop="18682" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="50" r_stop="141" r_length="92" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="18683" i_stop="18772" i_length="90">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.967" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="18773" g_stop="18904" g_length="132"/>
          <reference_exon_boundary r_type="cDNA" r_start="142" r_stop="273" r_length="132" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="18905" i_stop="19182" i_length="278">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="19183" g_stop="19349" g_length="167"/>
          <reference_exon_boundary r_type="cDNA" r_start="274" r_stop="440" r_length="167" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLe0039G15.1" gen_strand="+" ref_id="SGN-E245891" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>440</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLe0039G15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E245891" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="18418" e_stop="18466"/>
          <exon e_start="18591" e_stop="18682"/>
          <exon e_start="18773" e_stop="18904"/>
          <exon e_start="19183" e_stop="19349"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTTTGCAACTTGAATGTACAACACAATTCCGGAAACTGCTTTCAATTGGTCAGTGTTGCTTTGCTTTTTCCTAAATGTATTTCTGTTTGATCACCTTGACAATGAATGTTTTTCCTCTCTGTATCTTTGTGTCTTAATTAGTATGCGTGTTCACTTCTGGTTGTTTTGGCAGAACGCAATCCTCCTATAGAGGAAGTGATACAGTCTGGGGTAGTTCCTCGCTTTGTTGAATTTCTTGCTCGAGATGACTATCCTCAACTGCAGGTTTTTTTACAAAATCTATTATTTTTGTTTTTTGTTTTGCAGTTCCATCTTTATTTCTAATGTTTACATAATTGGCATTCTATAATCTAGTTTGAGGCAGCGTGGGCTCTTACAAATATTGCATCTGGTACATCAGAAAACACTAAAGTTGTGATTGATTATGGTTCTGTCCCAATTTTCATCAGACTTCTAAGTTCACCAAGTGATGATGTCCGTGAACAGGTAAAACTTTATATATAAGAGGGCTAAGCTTTCATGTTTCTTCTCATAATTGTCATGATATTATGTCTATTTTTCTTAAAAAAATTGGGGTTACGGGAAGGAGTAATGGGGGAGAGAATTACAAAGTGGAAATCAAACCCTCACTGGCAAGATGAAAGTTCAAGTATTCAACCAACTTAGCTACTAAGATTCTCCTGATATTGTATGTATTATGCCAATTTATTTCTGAGAAGTTAAAAATTCTTTTATTTTGATATTTTTTTTAAAAAAATTTATAGGCCGTTTGGGCTTTGGGAAATATTGCTGGTGACTCGCCCAAGTATCGTGACCTTGTGCTTGGCCATGGAGCTTTAGTGGCATTGCTGGCACAATTTAATGAGCAGGCAAAGCTATCTATGTTGAGAAATGCTACCTGGACATTGTCAAACTTTTGTAGGGGAAAACC</genome_strand>
        <mrna_strand>AGTTTGCAACTTGAATGTACAACACAATTCCGGAAACTGCTTTCAATTG............................................................................................................................AACGCAATCCTCCTATAGAGGAAGTGATACAGTCTGGGGTAGTTCCTCGCTTTGTTGAATTTCTTGCTCGAGATGACTATCCTCAACTGCAG..........................................................................................TTTGAGGCAGCGTGGGCTCTTACAAATATTGCATCTGGTACATCAGAAAACACTAAAGTTGTGATTGATTATGGTTCTGTCCCAATTTTCATCAGACTTCTAAGTTCACCAAGTGATGATGTCCGTGAACAG......................................................................................................................................................................................................................................................................................GCCGTTTGGGCTTTGGGAAATATTGCTGGTGACTCGCCCAAGTATCGTGACCTTGTGCTTGGCCATGGAGCTTTAGTGGCATTGCTGGCCCAATTTAATGAGCAGGCAAAGCTATCTATGTTGAGAAATGCTACCTGGACATTGTCAAACTTTTGTAGGGGAAAACC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLe0039G15-FcnBD/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E271316" ref_strand="+" ref_description="SGN-E271316 [cLEM-5-H14]">
      <seq>tgactatcctcaactgcagtttgaggcagcgtgggctcttacaaatattgcatctggtacatcagaaaacactaaagttgtgattgattatggttctgtcccaattttcatcagacttctaagttcaccaagtgatgatgtccgtgaacaggccgtttgggctttgggaaatattgctggtgactcgcccaagtatcgtgaccttgtgcttggccatggagctttagtggcattgctggcacaatttaatgagcaggcaaagctatctatgttgagaaatgctacctggacattgtcaaacttttgtaggggaaaacctcagccactgttcgagcagacaaaagcggcactccccactcttggtcgccttatccactcaaatgatgaagaagtcttgacagatgcatgctgggctctttcatatctttctgatggaactaatgacaaaatccaggctgttattgaagctggagtgtgttcccgccttgttgagctgctacttcattcttcaccatct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLe0039G15-FcnBD/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C06SLe0039G15.1" temp_strand="+" temp_description="C06SLe0039G15.1  AC216657.1 htgs_phase:1 submitted_to_sgn_as:C06SLe0039G15 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="18364" stop="19938"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="18664" g_stop="18682" g_length="19"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="19" r_length="19" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="18683" i_stop="18772" i_length="90">
            <donor d_prob="1.000" d_score="0.00"/>
            <acceptor a_prob="0.967" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18773" g_stop="18904" g_length="132"/>
          <reference_exon_boundary r_type="cDNA" r_start="20" r_stop="151" r_length="132" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="18905" i_stop="19182" i_length="278">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19183" g_stop="19368" g_length="186"/>
          <reference_exon_boundary r_type="cDNA" r_start="152" r_stop="337" r_length="186" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="19369" i_stop="19455" i_length="87">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.958" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="19456" g_stop="19619" g_length="164"/>
          <reference_exon_boundary r_type="cDNA" r_start="338" r_stop="501" r_length="164" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="19620" i_stop="19715" i_length="96">
            <donor d_prob="0.914" d_score="1.00"/>
            <acceptor a_prob="0.500" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="19716" g_stop="19731" g_length="16"/>
          <reference_exon_boundary r_type="cDNA" r_start="502" r_stop="517" r_length="16" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLe0039G15.1" gen_strand="+" ref_id="SGN-E271316" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>517</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLe0039G15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E271316" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="18664" e_stop="18682"/>
          <exon e_start="18773" e_stop="18904"/>
          <exon e_start="19183" e_stop="19368"/>
          <exon e_start="19456" e_stop="19619"/>
          <exon e_start="19716" e_stop="19731"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGACTATCCTCAACTGCAGGTTTTTTTACAAAATCTATTATTTTTGTTTTTTGTTTTGCAGTTCCATCTTTATTTCTAATGTTTACATAATTGGCATTCTATAATCTAGTTTGAGGCAGCGTGGGCTCTTACAAATATTGCATCTGGTACATCAGAAAACACTAAAGTTGTGATTGATTATGGTTCTGTCCCAATTTTCATCAGACTTCTAAGTTCACCAAGTGATGATGTCCGTGAACAGGTAAAACTTTATATATAAGAGGGCTAAGCTTTCATGTTTCTTCTCATAATTGTCATGATATTATGTCTATTTTTCTTAAAAAAATTGGGGTTACGGGAAGGAGTAATGGGGGAGAGAATTACAAAGTGGAAATCAAACCCTCACTGGCAAGATGAAAGTTCAAGTATTCAACCAACTTAGCTACTAAGATTCTCCTGATATTGTATGTATTATGCCAATTTATTTCTGAGAAGTTAAAAATTCTTTTATTTTGATATTTTTTTTAAAAAAATTTATAGGCCGTTTGGGCTTTGGGAAATATTGCTGGTGACTCGCCCAAGTATCGTGACCTTGTGCTTGGCCATGGAGCTTTAGTGGCATTGCTGGCACAATTTAATGAGCAGGCAAAGCTATCTATGTTGAGAAATGCTACCTGGACATTGTCAAACTTTTGTAGGGGAAAACCTCAGCCACTGTTCGAGCAGGTTTGACTTTAAAGATAAAGTTTGTTTGATCTTTTCAGATATTTATATTACTTTTAAAGGTTATGCCTTTTAAAATTCATCGCGCAGACAAAAGCGGCACTCCCCACTCTTGGTCGCCTTATCCACTCAAATGATGAAGAAGTCTTGACAGATGCATGCTGGGCTCTTTCATATCTTTCTGATGGAACTAATGACAAAATCCAGGCTGTTATTGAAGCTGGAGTGTGTTCCCGCCTTGTTGAGCTGCTACTGTGAGTTATAGATCTTACTTTTGAGGGTTTGTCTTAGGCTTTCGATATGTTAAAATCATAAGTTTCTTACTCCCTTCATCTTTTTTTCGTGAGTAGTCATTCTTCACCATCT</genome_strand>
        <mrna_strand>TGACTATCCTCAACTGCAG..........................................................................................TTTGAGGCAGCGTGGGCTCTTACAAATATTGCATCTGGTACATCAGAAAACACTAAAGTTGTGATTGATTATGGTTCTGTCCCAATTTTCATCAGACTTCTAAGTTCACCAAGTGATGATGTCCGTGAACAG......................................................................................................................................................................................................................................................................................GCCGTTTGGGCTTTGGGAAATATTGCTGGTGACTCGCCCAAGTATCGTGACCTTGTGCTTGGCCATGGAGCTTTAGTGGCATTGCTGGCACAATTTAATGAGCAGGCAAAGCTATCTATGTTGAGAAATGCTACCTGGACATTGTCAAACTTTTGTAGGGGAAAACCTCAGCCACTGTTCGAGCAG.......................................................................................ACAAAAGCGGCACTCCCCACTCTTGGTCGCCTTATCCACTCAAATGATGAAGAAGTCTTGACAGATGCATGCTGGGCTCTTTCATATCTTTCTGATGGAACTAATGACAAAATCCAGGCTGTTATTGAAGCTGGAGTGTGTTCCCGCCTTGTTGAGCTGCTACT................................................................................................TCATTCTTCACCATCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLe0039G15-FcnBD/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E207706" ref_strand="+" ref_description="SGN-E207706 [cLEC-32-C13]">
      <seq>ctcttacaaatattgcatctggtacatcagaaaacactaaagttgtgattgattatggttctgtcccaattttcatcagacttctaagttcaccaagtgatgatgtccgtgaacaggccgtttgggctttgggaaatattgctggtgactcgcccaagtatcgtgaccttgtgcttggccatggagctttagtggcattgctggcacaatttaatgagcaggcaaagctatctatgttgagaaatgctacctggacattgtcaaacttttgtaggggaaaacctcagccactgttcgagcagacaaaagcggcactccccactcttggtcgccttatccactcaaatgatgaagaagtcttgacagatgcatgctgggctctttcatatctttctgatggaactaatgacaaaatccaggctgttattgaagctgga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLe0039G15-FcnBD/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C06SLe0039G15.1" temp_strand="+" temp_description="C06SLe0039G15.1  AC216657.1 htgs_phase:1 submitted_to_sgn_as:C06SLe0039G15 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="18489" stop="19890"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="18789" g_stop="18904" g_length="116"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="116" r_length="116" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="18905" i_stop="19182" i_length="278">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="19183" g_stop="19368" g_length="186"/>
          <reference_exon_boundary r_type="cDNA" r_start="117" r_stop="302" r_length="186" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19369" i_stop="19455" i_length="87">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.958" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19456" g_stop="19590" g_length="135"/>
          <reference_exon_boundary r_type="cDNA" r_start="303" r_stop="437" r_length="135" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLe0039G15.1" gen_strand="+" ref_id="SGN-E207706" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>437</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLe0039G15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E207706" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="18789" e_stop="18904"/>
          <exon e_start="19183" e_stop="19368"/>
          <exon e_start="19456" e_stop="19590"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCTTACAAATATTGCATCTGGTACATCAGAAAACACTAAAGTTGTGATTGATTATGGTTCTGTCCCAATTTTCATCAGACTTCTAAGTTCACCAAGTGATGATGTCCGTGAACAGGTAAAACTTTATATATAAGAGGGCTAAGCTTTCATGTTTCTTCTCATAATTGTCATGATATTATGTCTATTTTTCTTAAAAAAATTGGGGTTACGGGAAGGAGTAATGGGGGAGAGAATTACAAAGTGGAAATCAAACCCTCACTGGCAAGATGAAAGTTCAAGTATTCAACCAACTTAGCTACTAAGATTCTCCTGATATTGTATGTATTATGCCAATTTATTTCTGAGAAGTTAAAAATTCTTTTATTTTGATATTTTTTTTAAAAAAATTTATAGGCCGTTTGGGCTTTGGGAAATATTGCTGGTGACTCGCCCAAGTATCGTGACCTTGTGCTTGGCCATGGAGCTTTAGTGGCATTGCTGGCACAATTTAATGAGCAGGCAAAGCTATCTATGTTGAGAAATGCTACCTGGACATTGTCAAACTTTTGTAGGGGAAAACCTCAGCCACTGTTCGAGCAGGTTTGACTTTAAAGATAAAGTTTGTTTGATCTTTTCAGATATTTATATTACTTTTAAAGGTTATGCCTTTTAAAATTCATCGCGCAGACAAAAGCGGCACTCCCCACTCTTGGTCGCCTTATCCACTCAAATGATGAAGAAGTCTTGACAGATGCATGCTGGGCTCTTTCATATCTTTCTGATGGAACTAATGACAAAATCCAGGCTGTTATTGAAGCTGGA</genome_strand>
        <mrna_strand>CTCTTACAAATATTGCATCTGGTACATCAGAAAACACTAAAGTTGTGATTGATTATGGTTCTGTCCCAATTTTCATCAGACTTCTAAGTTCACCAAGTGATGATGTCCGTGAACAG......................................................................................................................................................................................................................................................................................GCCGTTTGGGCTTTGGGAAATATTGCTGGTGACTCGCCCAAGTATCGTGACCTTGTGCTTGGCCATGGAGCTTTAGTGGCATTGCTGGCACAATTTAATGAGCAGGCAAAGCTATCTATGTTGAGAAATGCTACCTGGACATTGTCAAACTTTTGTAGGGGAAAACCTCAGCCACTGTTCGAGCAG.......................................................................................ACAAAAGCGGCACTCCCCACTCTTGGTCGCCTTATCCACTCAAATGATGAAGAAGTCTTGACAGATGCATGCTGGGCTCTTTCATATCTTTCTGATGGAACTAATGACAAAATCCAGGCTGTTATTGAAGCTGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLe0039G15-FcnBD/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E544736" ref_strand="+" ref_description="SGN-E544736 [TUS-67-D14]">
      <seq>acgatatccaaactcaggttatgattgaccatcatgctcttccctgccttgttaacctgttgacgcataattacaaaaaaagcattaaaaaggaagcttgttggacaatctcaaacattacagctggtaatagaaatcaaattcagattgtgatcgaggctggcattattgcccctcttgtatatctgctacaaaatgctgaatttgagataaagaaagaggctgcttgagcaatttcaaatgctacgtccggtggaaatcatgatcaaatcaagttcttggtgagccaaggttgtataaaaccattgtgtgatcttctggtatgtcctgacccaagaattgtcactgtctgcttggaagggcttgagaatattctgaagattggggaagctgataaggatctacgaaacacagaacgcgtgaatgtttatgcccacttaatcgacgaggctgaaggtctagaaaagattgaaaacctccaaagccatgactacactgaaatctatgataaagcagtgaagatcctcgaaacttattggttggaggatgaagatgtgcccgtttcattacatgacgatcaattcgaatttggatgggccgatatatctcttccatcgggaggatttaacttcaattgatggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLe0039G15-FcnBD/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C06SLe0039G15.1" temp_strand="+" temp_description="C06SLe0039G15.1  AC216657.1 htgs_phase:1 submitted_to_sgn_as:C06SLe0039G15 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="19478" stop="21786"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19778" g_stop="19794" g_length="17"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="17" r_length="17" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="19795" i_stop="20646" i_length="852">
            <donor d_prob="1.000" d_score="0.00"/>
            <acceptor a_prob="0.941" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20647" g_stop="20775" g_length="129"/>
          <reference_exon_boundary r_type="cDNA" r_start="18" r_stop="146" r_length="129" r_score="0.984"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="20776" i_stop="20910" i_length="135">
            <donor d_prob="0.969" d_score="0.98"/>
            <acceptor a_prob="0.976" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="20911" g_stop="21038" g_length="128"/>
          <reference_exon_boundary r_type="cDNA" r_start="147" r_stop="274" r_length="128" r_score="0.992"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="21039" i_stop="21118" i_length="80">
            <donor d_prob="0.994" d_score="0.98"/>
            <acceptor a_prob="0.763" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="21119" g_stop="21486" g_length="368"/>
          <reference_exon_boundary r_type="cDNA" r_start="275" r_stop="642" r_length="368" r_score="0.970"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLe0039G15.1" gen_strand="+" ref_id="SGN-E544736" ref_strand="+">
        <total_alignment_score>0.978</total_alignment_score>
        <cumulative_length_of_scored_exons>642</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLe0039G15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E544736" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19778" e_stop="19794"/>
          <exon e_start="20647" e_stop="20775"/>
          <exon e_start="20911" e_stop="21038"/>
          <exon e_start="21119" e_stop="21486"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACGATATCCAAACTCAGGTATTTATCATCCTCCCAGCCAATTTTTCATGTTTGATTTTTTTTTTTCGTTTTTCCCTCTTCTCATCCTTAATTGAGTCTTTGTGTAAACATGAATTCTCAATATCTAATCCATCAGTACGTCAGATGTATCTTCATCTTTTTGTTTAGGTAAATTATGCTGGTCAGATAAAAATACTTAAAAATCTAGCTTTCGTCAATGATAATTCAATTTTTGTAATAATTCTGATAGTCAACTATATCATAATCATGATATGAAAGAAAAGAGGAGTAAAGATTGGCTAGTCAATTAGTTCTCATTAAGTTTCTACCATGTTTAAGAGAGGTTACTCACGGAAGTCTTCGCTAATTCATCCGTGTACTGCAGTCAGTCTTCAGTTATCACGTTTGCCTACCTGAGTAGGGGGTTAGTGGTGTTTGGCTGTTATGATTATTTTTAGAATAAACTTTCCATTGCCGAACTGCTCACTGGGATAGTGTTGCACCACATATTTACGGAACAAATGGTGTTACATCTCTATTTGTTCTTAGGAGAAAAAATAGGGAGAGGAAATTTTCTAAATTTTTGGTCCCTGAAACGTAAGACGAGTGAAATTGAGTTAACTTCTTTGCTATCCTGTTATTCTCCTACCAAGGTAGGGAAGCTCTAATAGGGTAGTATTGTACGGCAGAGGCATGCTCTCTTTCAGTGAGGAGTTATTTGCAACCTTCCATTTTTGTTACCTCTCAGACGTAGTGGAAATAAAATGGACATAAAAACTACATCTTTTGGTTGTTGAAGCAAATTATGTCCTACCTAATTTATCAGCTGGAATCTTTTTTGGTGGACATTGATGAATCTATATTGTTTAGGTTATGATTGACCATCATGCTCTTCCCTGCCTTGTTAACCTGTTGACGCAAAATTACAAAAAAAGCATTAAAAAGGAAGCTTGTTGGACAATCTCGAACATTACAGCTGGTAATAGAAATCAAATTCAGGTATGTTGTATGGTAATTGACAATTTGTGCTTCTTTATCAATTGACAGAGAACTGAAAATAAGTGAAGAAAGAGAACCTTTGCAAGATGATTCAGTTTTGTATAATGATACTGAAAGGGGTTTTAATTGAAATAGATTGTGATCGAGGCTGGCATTATTGCCCCTCTTGTATATCTGCTACAAAATGCTGAATTTGAGATAAAGAAAGAGGCTGCTTGGGCAATTTCAAATGCTACGTCCGGTGGAAATCATGATCAAATCAAGTATGGTTCCTTTAGCATATTCAGTTTCATCTGCTTAACCTTACATCTAGTTTGAAGCTCACATGTAAATTGATTTCTAGGTTCTTGGTGAGCCAAGGTTGTATAAAACCATTGTGTGATCTTCTGGTATGTCCTGACCCAAGAATTGTCACTGTCTGCTTGGAAGGGCTTGAGAATATTCTGAAGATTGGGGAAGCTGATAAGGATCTAGGAAACACAGAAGGCGTGAATGTTTATGCCCAGTTAATCGACGAGGCTGAAGGTCTAGAAAAGATTGAAAACCTCCAAAGCCATGACAACACTGAAATCTATGAGAAAGCAGTGAAGATCCTCGAAACTTATTGGTTGGAGGAGGAAGATGTGCCGGTTTCATTAAATGAAGATCAATTCGAATTTGGAGGGGCCGATATATCTCTTCCATCGGGAGGATTTAACTTCAGTTGATGGG</genome_strand>
        <mrna_strand>ACGATATCCAAACTCAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTATGATTGACCATCATGCTCTTCCCTGCCTTGTTAACCTGTTGACGCATAATTACAAAAAAAGCATTAAAAAGGAAGCTTGTTGGACAATCTCAAACATTACAGCTGGTAATAGAAATCAAATTCAG.......................................................................................................................................ATTGTGATCGAGGCTGGCATTATTGCCCCTCTTGTATATCTGCTACAAAATGCTGAATTTGAGATAAAGAAAGAGGCTGCTTGAGCAATTTCAAATGCTACGTCCGGTGGAAATCATGATCAAATCAA................................................................................GTTCTTGGTGAGCCAAGGTTGTATAAAACCATTGTGTGATCTTCTGGTATGTCCTGACCCAAGAATTGTCACTGTCTGCTTGGAAGGGCTTGAGAATATTCTGAAGATTGGGGAAGCTGATAAGGATCTACGAAACACAGAACGCGTGAATGTTTATGCCCACTTAATCGACGAGGCTGAAGGTCTAGAAAAGATTGAAAACCTCCAAAGCCATGACTACACTGAAATCTATGATAAAGCAGTGAAGATCCTCGAAACTTATTGGTTGGAGGATGAAGATGTGCCCGTTTCATTACATGACGATCAATTCGAATTTGGATGGGCCGATATATCTCTTCCATCGGGAGGATTTAACTTCAATTGATGGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLe0039G15-FcnBD/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E306640" ref_strand="+" ref_description="SGN-E306640 [cLEY-19-D15]">
      <seq>cgatatccaaactcaggttatgattgaccatcatgctcttccctgccttgttaacctgttgacgcaaaattacaaaaaaagcattaaaaaggaagcttgttggacaatctcgaacattacagctggtaatagaaatcaaattcagattgtgatcgaggctggcattattgcccctcttgtatatctgctacaaaatgctgaatttgagataaagaaagaggctgcttgggcaatttcaaatgctacgtccggtggaaatcatgatcaaatcaagttcttggtgagccaaggttgtataaaaccattgtgtgatcttctggtatgtcctgacccaagaattgtcactgtctgcttggaagggcttgagaatattctgaagattggggaagctgataaggatctaggaaacacagaaggcgtgaatgtttatgcccagttaatcgacgaggctgaaggtctagaaaagattgaaaacctccaaagccatgacaacactgaaatctatgagaaagcagtgaagatcctcgaaacttattggttggaggaggaagatgtgccggtttcattaaatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLe0039G15-FcnBD/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C06SLe0039G15.1" temp_strand="+" temp_description="C06SLe0039G15.1  AC216657.1 htgs_phase:1 submitted_to_sgn_as:C06SLe0039G15 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="19479" stop="21717"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19779" g_stop="19794" g_length="16"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="16" r_length="16" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="19795" i_stop="20646" i_length="852">
            <donor d_prob="1.000" d_score="0.00"/>
            <acceptor a_prob="0.941" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20647" g_stop="20775" g_length="129"/>
          <reference_exon_boundary r_type="cDNA" r_start="17" r_stop="145" r_length="129" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="20776" i_stop="20910" i_length="135">
            <donor d_prob="0.969" d_score="1.00"/>
            <acceptor a_prob="0.976" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="20911" g_stop="21038" g_length="128"/>
          <reference_exon_boundary r_type="cDNA" r_start="146" r_stop="273" r_length="128" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="21039" i_stop="21118" i_length="80">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.763" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="21119" g_stop="21417" g_length="299"/>
          <reference_exon_boundary r_type="cDNA" r_start="274" r_stop="572" r_length="299" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLe0039G15.1" gen_strand="+" ref_id="SGN-E306640" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>572</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLe0039G15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E306640" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19779" e_stop="19794"/>
          <exon e_start="20647" e_stop="20775"/>
          <exon e_start="20911" e_stop="21038"/>
          <exon e_start="21119" e_stop="21417"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGATATCCAAACTCAGGTATTTATCATCCTCCCAGCCAATTTTTCATGTTTGATTTTTTTTTTTCGTTTTTCCCTCTTCTCATCCTTAATTGAGTCTTTGTGTAAACATGAATTCTCAATATCTAATCCATCAGTACGTCAGATGTATCTTCATCTTTTTGTTTAGGTAAATTATGCTGGTCAGATAAAAATACTTAAAAATCTAGCTTTCGTCAATGATAATTCAATTTTTGTAATAATTCTGATAGTCAACTATATCATAATCATGATATGAAAGAAAAGAGGAGTAAAGATTGGCTAGTCAATTAGTTCTCATTAAGTTTCTACCATGTTTAAGAGAGGTTACTCACGGAAGTCTTCGCTAATTCATCCGTGTACTGCAGTCAGTCTTCAGTTATCACGTTTGCCTACCTGAGTAGGGGGTTAGTGGTGTTTGGCTGTTATGATTATTTTTAGAATAAACTTTCCATTGCCGAACTGCTCACTGGGATAGTGTTGCACCACATATTTACGGAACAAATGGTGTTACATCTCTATTTGTTCTTAGGAGAAAAAATAGGGAGAGGAAATTTTCTAAATTTTTGGTCCCTGAAACGTAAGACGAGTGAAATTGAGTTAACTTCTTTGCTATCCTGTTATTCTCCTACCAAGGTAGGGAAGCTCTAATAGGGTAGTATTGTACGGCAGAGGCATGCTCTCTTTCAGTGAGGAGTTATTTGCAACCTTCCATTTTTGTTACCTCTCAGACGTAGTGGAAATAAAATGGACATAAAAACTACATCTTTTGGTTGTTGAAGCAAATTATGTCCTACCTAATTTATCAGCTGGAATCTTTTTTGGTGGACATTGATGAATCTATATTGTTTAGGTTATGATTGACCATCATGCTCTTCCCTGCCTTGTTAACCTGTTGACGCAAAATTACAAAAAAAGCATTAAAAAGGAAGCTTGTTGGACAATCTCGAACATTACAGCTGGTAATAGAAATCAAATTCAGGTATGTTGTATGGTAATTGACAATTTGTGCTTCTTTATCAATTGACAGAGAACTGAAAATAAGTGAAGAAAGAGAACCTTTGCAAGATGATTCAGTTTTGTATAATGATACTGAAAGGGGTTTTAATTGAAATAGATTGTGATCGAGGCTGGCATTATTGCCCCTCTTGTATATCTGCTACAAAATGCTGAATTTGAGATAAAGAAAGAGGCTGCTTGGGCAATTTCAAATGCTACGTCCGGTGGAAATCATGATCAAATCAAGTATGGTTCCTTTAGCATATTCAGTTTCATCTGCTTAACCTTACATCTAGTTTGAAGCTCACATGTAAATTGATTTCTAGGTTCTTGGTGAGCCAAGGTTGTATAAAACCATTGTGTGATCTTCTGGTATGTCCTGACCCAAGAATTGTCACTGTCTGCTTGGAAGGGCTTGAGAATATTCTGAAGATTGGGGAAGCTGATAAGGATCTAGGAAACACAGAAGGCGTGAATGTTTATGCCCAGTTAATCGACGAGGCTGAAGGTCTAGAAAAGATTGAAAACCTCCAAAGCCATGACAACACTGAAATCTATGAGAAAGCAGTGAAGATCCTCGAAACTTATTGGTTGGAGGAGGAAGATGTGCCGGTTTCATTAAATG</genome_strand>
        <mrna_strand>CGATATCCAAACTCAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTATGATTGACCATCATGCTCTTCCCTGCCTTGTTAACCTGTTGACGCAAAATTACAAAAAAAGCATTAAAAAGGAAGCTTGTTGGACAATCTCGAACATTACAGCTGGTAATAGAAATCAAATTCAG.......................................................................................................................................ATTGTGATCGAGGCTGGCATTATTGCCCCTCTTGTATATCTGCTACAAAATGCTGAATTTGAGATAAAGAAAGAGGCTGCTTGGGCAATTTCAAATGCTACGTCCGGTGGAAATCATGATCAAATCAA................................................................................GTTCTTGGTGAGCCAAGGTTGTATAAAACCATTGTGTGATCTTCTGGTATGTCCTGACCCAAGAATTGTCACTGTCTGCTTGGAAGGGCTTGAGAATATTCTGAAGATTGGGGAAGCTGATAAGGATCTAGGAAACACAGAAGGCGTGAATGTTTATGCCCAGTTAATCGACGAGGCTGAAGGTCTAGAAAAGATTGAAAACCTCCAAAGCCATGACAACACTGAAATCTATGAGAAAGCAGTGAAGATCCTCGAAACTTATTGGTTGGAGGAGGAAGATGTGCCGGTTTCATTAAATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLe0039G15-FcnBD/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E695080" ref_strand="+" ref_description="SGN-E695080 [LH_Ea05J14](-)">
      <seq>atgattgaccatcatgctcttcccctgccttgttaacctgttgacgcaaaattacaaaaaaagcattaaaaaagaagcttgttggacaatctcgaacattacagctggaaatagaaatcaaattcagattgtgattgaggctggcattattgcccctcttgtatatctgcttcaaaatgctgaatttgagataaagaaagaggctgcttgggcaatttcaaatgctacgtccggtggaaatcatgatcaaatcaagttcttggtgagccaaggttgtataaaaccattgtgtgatcttctggtatgtcctgacccaagaattgtcactgtctgtttggaagggcttgagaatattctgaagattggggaagctgataaggatctaggtaacacagaaggcgtgaatgtttatgcccagttaatcgacgaggctgaaggtctagaaaagattgaaaacctccaaagccatgacaacactgaaatctatgagaaagcagtgaagatcctcgaaacttattggttggaggaggaagatgtgccggtttcattaattgaagatcaattcgaatttggaggggccgatatatctcttccatcgggaggatttaacttcagttgatgggggttttcaggagataagtacaaaaacgatggctttagagtttcttggtcttcttaccacttagcttgatttatacactgagtgcccaagtggtcctcaagccaacccaactccacattgtaaaaaaagaactaacaatatgcttaacaaagtgtaaatgaatattaatgaaaattgagtttgagtttaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLe0039G15-FcnBD/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C06SLe0039G15.1" temp_strand="+" temp_description="C06SLe0039G15.1  AC216657.1 htgs_phase:1 submitted_to_sgn_as:C06SLe0039G15 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="20350" stop="24314"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20650" g_stop="20775" g_length="126"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="127" r_length="127" r_score="0.968"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="20776" i_stop="20910" i_length="135">
            <donor d_prob="0.969" d_score="0.98"/>
            <acceptor a_prob="0.976" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20911" g_stop="21038" g_length="128"/>
          <reference_exon_boundary r_type="cDNA" r_start="128" r_stop="255" r_length="128" r_score="0.984"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="21039" i_stop="21118" i_length="80">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.763" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="21119" g_stop="21486" g_length="368"/>
          <reference_exon_boundary r_type="cDNA" r_start="256" r_stop="623" r_length="368" r_score="0.992"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="21487" i_stop="22175" i_length="689">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="22176" g_stop="22380" g_length="205"/>
          <reference_exon_boundary r_type="cDNA" r_start="624" r_stop="828" r_length="205" r_score="0.883"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLe0039G15.1" gen_strand="+" ref_id="SGN-E695080" ref_strand="+">
        <total_alignment_score>0.960</total_alignment_score>
        <cumulative_length_of_scored_exons>827</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLe0039G15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E695080" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20650" e_stop="20775"/>
          <exon e_start="20911" e_stop="21038"/>
          <exon e_start="21119" e_stop="21486"/>
          <exon e_start="22176" e_stop="22380"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGATTGACCATCATGCTCTT-CCCTGCCTTGTTAACCTGTTGACGCAAAATTACAAAAAAAGCATTAAAAAGGAAGCTTGTTGGACAATCTCGAACATTACAGCTGGTAATAGAAATCAAATTCAGGTATGTTGTATGGTAATTGACAATTTGTGCTTCTTTATCAATTGACAGAGAACTGAAAATAAGTGAAGAAAGAGAACCTTTGCAAGATGATTCAGTTTTGTATAATGATACTGAAAGGGGTTTTAATTGAAATAGATTGTGATCGAGGCTGGCATTATTGCCCCTCTTGTATATCTGCTACAAAATGCTGAATTTGAGATAAAGAAAGAGGCTGCTTGGGCAATTTCAAATGCTACGTCCGGTGGAAATCATGATCAAATCAAGTATGGTTCCTTTAGCATATTCAGTTTCATCTGCTTAACCTTACATCTAGTTTGAAGCTCACATGTAAATTGATTTCTAGGTTCTTGGTGAGCCAAGGTTGTATAAAACCATTGTGTGATCTTCTGGTATGTCCTGACCCAAGAATTGTCACTGTCTGCTTGGAAGGGCTTGAGAATATTCTGAAGATTGGGGAAGCTGATAAGGATCTAGGAAACACAGAAGGCGTGAATGTTTATGCCCAGTTAATCGACGAGGCTGAAGGTCTAGAAAAGATTGAAAACCTCCAAAGCCATGACAACACTGAAATCTATGAGAAAGCAGTGAAGATCCTCGAAACTTATTGGTTGGAGGAGGAAGATGTGCCGGTTTCATTAAATGAAGATCAATTCGAATTTGGAGGGGCCGATATATCTCTTCCATCGGGAGGATTTAACTTCAGTTGATGGGGTATGTTATTCTTCCCTTCTTTTTTATGATTATTTCCCCTCTGTTAACGACGGTTTCCTTTGAAAACTTTTGTTCTTTTGAGCACCTGTTTTATGGTGTAAATTATTTAGCATTAGGATGTGTTAAAATGGTGTTTGAGCGATGATGTAAAGCTAGTCAACCTTACCTTTGATTTAGCAAAAATGGTTTGTTGCAGTTAAAACTTGTGGTAGTTTCTTAATGTTTAATTCTTTCCAGGTTTGGCTAGCAGGTCAGTGAGTGGTTTTAAATTGGAGAAACATCCTCTTTAAACTATGTGTAGAGAGAGTTGTCATCTACTTGGGGGAGGTTTGGATTTTACATATATTTTCTTCTATTTATTGATGGAGTTGGTGTTGTATAAGTTACTTTTTCCCCTAGACTAGACATATTGGTGGTGGTGGATATATATATGTATACATGTTAATGTACAAGTCATACGTGGGCTCTCCATGACATTATTTGGTGTAAACATATACTTGTTTCCATCTTTTTGTACCCTTATATGGCTTGTTTCCATCTCTGTACCCTCATTTGGCATTATCATAGTAGTTGCTTTCTGACTTAAGAAGAGATACTTCATTTACAAGAATGAGGTGCTGAAATTACTATCAATATGGAATGTGTTTGCTCCTTTTTGATCATTTGCTATATTTATATGTTCATTTTAGGGTTTTGAGGAGATAAGTACAAAAACGACGGCTTTAGAGTTTCTTGGTCTTCTTACCACTTAGCTTGATTGATACAATGAGTGCCCAAGTGGTCCTCAAGCCAACCCAACTCCACATTATAAAAA-AGAACAAACAATATGCTTAACAAAGTGTACATTAATATTAATGAAAAATGAGTTTTGAGTTTTACGTTCTAATATGGCAA</genome_strand>
        <mrna_strand>ATGATTGACCATCATGCTCTTCCCCTGCCTTGTTAACCTGTTGACGCAAAATTACAAAAAAAGCATTAAAAAAGAAGCTTGTTGGACAATCTCGAACATTACAGCTGGAAATAGAAATCAAATTCAG.......................................................................................................................................ATTGTGATTGAGGCTGGCATTATTGCCCCTCTTGTATATCTGCTTCAAAATGCTGAATTTGAGATAAAGAAAGAGGCTGCTTGGGCAATTTCAAATGCTACGTCCGGTGGAAATCATGATCAAATCAA................................................................................GTTCTTGGTGAGCCAAGGTTGTATAAAACCATTGTGTGATCTTCTGGTATGTCCTGACCCAAGAATTGTCACTGTCTGTTTGGAAGGGCTTGAGAATATTCTGAAGATTGGGGAAGCTGATAAGGATCTAGGTAACACAGAAGGCGTGAATGTTTATGCCCAGTTAATCGACGAGGCTGAAGGTCTAGAAAAGATTGAAAACCTCCAAAGCCATGACAACACTGAAATCTATGAGAAAGCAGTGAAGATCCTCGAAACTTATTGGTTGGAGGAGGAAGATGTGCCGGTTTCATTAATTGAAGATCAATTCGAATTTGGAGGGGCCGATATATCTCTTCCATCGGGAGGATTTAACTTCAGTTGATGGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTTTTCAGGAGATAAGTACAAAAACGATGGCTTTAGAGTTTCTTGGTCTTCTTACCACTTAGCTTGATTTATACACTGAGTGCCCAAGTGGTCCTCAAGCCAACCCAACTCCACATTGTAAAAAAAGAACTAACAATATGCTTAACAAAGTGTAAATGAATATTAATGAAAATTGAG-TTTGAGTTTAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLe0039G15-FcnBD/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E695753" ref_strand="+" ref_description="SGN-E695753 [LH_Ea07F15](-)">
      <seq>atagaaatcaaattcagattgtgattgaggctggcattattgcccctcttgtatatctgcttcaaaatgctgaatttgagataaagaaagaggctgcttgggcaatttcaaatgctacgtccggtggaaatcatgatcaaatcaagttcttggtgagccaaggttgtataaaaccattgtgtgatcttctggtatgtcctgacccaagaattgtcactgtctgtttggaagggcttgagaatattctgaagattggggaagctgataaggatctaggtaacacagaaggcgtgaatgtttatgcccagttaatcgacgaggctgaaggtctagaaaagattgaaaacctccaaagccatgacaacactgaaatctatgagaaagcagtgaagatcctcgaaacttattggttggaggaggaagatgtgccggtttcattaattgaagatcaattcgaatttggaggggccgatatatctcttccatcgggaggatttaacttcagttgatggggtttggctagcaggttagtgagtggttttaaattggagaaacatcctgctcattaaacatgtgtagagagagttgtcatctacttgggggacgatcggatttttacatatattttcttctatttattgatggagttggtgttctataagttaccttttcccctagactagactattggtggtggtggatattatatatatatatgtgtgtgtgtatacatgttaatgtacaagtcatacctgggctctccatggccttatttggtgtaaacatatacttgtttcaatgtttttgtacccttatatggcttgtttccaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLe0039G15-FcnBD/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C06SLe0039G15.1" temp_strand="+" temp_description="C06SLe0039G15.1  AC216657.1 htgs_phase:1 submitted_to_sgn_as:C06SLe0039G15 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="20600" stop="22323"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20759" g_stop="20775" g_length="17"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="17" r_length="17" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="20776" i_stop="20910" i_length="135">
            <donor d_prob="0.969" d_score="0.00"/>
            <acceptor a_prob="0.976" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20911" g_stop="21038" g_length="128"/>
          <reference_exon_boundary r_type="cDNA" r_start="18" r_stop="145" r_length="128" r_score="0.984"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="21039" i_stop="21118" i_length="80">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.763" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="21119" g_stop="21486" g_length="368"/>
          <reference_exon_boundary r_type="cDNA" r_start="146" r_stop="513" r_length="368" r_score="0.992"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="21487" i_stop="21723" i_length="237">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="21724" g_stop="22022" g_length="299"/>
          <reference_exon_boundary r_type="cDNA" r_start="514" r_stop="829" r_length="316" r_score="0.829"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="830" polyA_stop="848"/>
      <MATCH_line gen_id="C06SLe0039G15.1" gen_strand="+" ref_id="SGN-E695753" ref_strand="+">
        <total_alignment_score>0.930</total_alignment_score>
        <cumulative_length_of_scored_exons>812</cumulative_length_of_scored_exons>
        <coverage percentage="0.958" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLe0039G15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E695753" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20759" e_stop="20775"/>
          <exon e_start="20911" e_stop="21038"/>
          <exon e_start="21119" e_stop="21486"/>
          <exon e_start="21724" e_stop="22022"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATAGAAATCAAATTCAGGTATGTTGTATGGTAATTGACAATTTGTGCTTCTTTATCAATTGACAGAGAACTGAAAATAAGTGAAGAAAGAGAACCTTTGCAAGATGATTCAGTTTTGTATAATGATACTGAAAGGGGTTTTAATTGAAATAGATTGTGATCGAGGCTGGCATTATTGCCCCTCTTGTATATCTGCTACAAAATGCTGAATTTGAGATAAAGAAAGAGGCTGCTTGGGCAATTTCAAATGCTACGTCCGGTGGAAATCATGATCAAATCAAGTATGGTTCCTTTAGCATATTCAGTTTCATCTGCTTAACCTTACATCTAGTTTGAAGCTCACATGTAAATTGATTTCTAGGTTCTTGGTGAGCCAAGGTTGTATAAAACCATTGTGTGATCTTCTGGTATGTCCTGACCCAAGAATTGTCACTGTCTGCTTGGAAGGGCTTGAGAATATTCTGAAGATTGGGGAAGCTGATAAGGATCTAGGAAACACAGAAGGCGTGAATGTTTATGCCCAGTTAATCGACGAGGCTGAAGGTCTAGAAAAGATTGAAAACCTCCAAAGCCATGACAACACTGAAATCTATGAGAAAGCAGTGAAGATCCTCGAAACTTATTGGTTGGAGGAGGAAGATGTGCCGGTTTCATTAAATGAAGATCAATTCGAATTTGGAGGGGCCGATATATCTCTTCCATCGGGAGGATTTAACTTCAGTTGATGGGGTATGTTATTCTTCCCTTCTTTTTTATGATTATTTCCCCTCTGTTAACGACGGTTTCCTTTGAAAACTTTTGTTCTTTTGAGCACCTGTTTTATGGTGTAAATTATTTAGCATTAGGATGTGTTAAAATGGTGTTTGAGCGATGATGTAAAGCTAGTCAACCTTACCTTTGATTTAGCAAAAATGGTTTGTTGCAGTTAAAACTTGTGGTAGTTTCTTAATGTTTAATTCTTTCCAGGTTTGGCTAGCAGGTCAGTGAGTGGTTTTAAATTGGAGAAACATCCT-CT--TTAAACTATGTGTAGAGAGAGTTGTCATCTACTTGGGGGAGGTTTGGA-TTTTACATATATTTTCTTCTATTTATTGATGGAGTTGGTGTTGTATAAGTTACTTTTTCCCCTAGACTAGACATATTGGTGGTGGTGG-------ATATATATA--------TGTATACATGTTAATGTACAAGTCATACGTGGGCTCTCCATGACATTATTTGGTGTAAACATATACTTGTTTCCATCTTTTTGTACCCTTATATGGCTTGTTTCC</genome_strand>
        <mrna_strand>ATAGAAATCAAATTCAG.......................................................................................................................................ATTGTGATTGAGGCTGGCATTATTGCCCCTCTTGTATATCTGCTTCAAAATGCTGAATTTGAGATAAAGAAAGAGGCTGCTTGGGCAATTTCAAATGCTACGTCCGGTGGAAATCATGATCAAATCAA................................................................................GTTCTTGGTGAGCCAAGGTTGTATAAAACCATTGTGTGATCTTCTGGTATGTCCTGACCCAAGAATTGTCACTGTCTGTTTGGAAGGGCTTGAGAATATTCTGAAGATTGGGGAAGCTGATAAGGATCTAGGTAACACAGAAGGCGTGAATGTTTATGCCCAGTTAATCGACGAGGCTGAAGGTCTAGAAAAGATTGAAAACCTCCAAAGCCATGACAACACTGAAATCTATGAGAAAGCAGTGAAGATCCTCGAAACTTATTGGTTGGAGGAGGAAGATGTGCCGGTTTCATTAATTGAAGATCAATTCGAATTTGGAGGGGCCGATATATCTCTTCCATCGGGAGGATTTAACTTCAGTTGATGGG.............................................................................................................................................................................................................................................GTTTGGCTAGCAGGTTAGTGAGTGGTTTTAAATTGGAGAAACATCCTGCTCATTAAAC-ATGTGTAGAGAGAGTTGTCATCTACTTGGGGGACGATCGGATTTTTACATATATTTTCTTCTATTTATTGATGGAGTTGGTGTTCTATAAGTTACCTTTTCCCCTAGACTAGAC-TATTGGTGGTGGTGGATATTATATATATATATGTGTGTGTGTATACATGTTAATGTACAAGTCATACCTGGGCTCTCCATGGCCTTATTTGGTGTAAACATATACTTGTTTCAATGTTTTTGTACCCTTATATGGCTTGTTTCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLe0039G15-FcnBD/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E209406" ref_strand="+" ref_description="SGN-E209406 [cLEC-53-F7]">
      <seq>gaggatttaacttcagttgatggtttttggctagcaggtcagtgagtggttttaaattggagaaacatcctctttaaactatgtgtagagagagttgtcatctacttgggggaggtttggattttacatatattttcttctatttattgatggagctggtgttgtataaagttacttttttccctaaactagacatattggtggtggtggatatatatatgtatacatgttaatgtacaagtcatacgtgggctctccatgacattatttggtgtaaacata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLe0039G15-FcnBD/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C06SLe0039G15.1" temp_strand="+" temp_description="C06SLe0039G15.1  AC216657.1 htgs_phase:1 submitted_to_sgn_as:C06SLe0039G15 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="21163" stop="22280"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="21463" g_stop="21486" g_length="24"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="24" r_length="24" r_score="0.958"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="21487" i_stop="21723" i_length="237">
            <donor d_prob="0.998" d_score="0.00"/>
            <acceptor a_prob="0.998" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="21724" g_stop="21980" g_length="257"/>
          <reference_exon_boundary r_type="cDNA" r_start="25" r_stop="282" r_length="258" r_score="0.977"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLe0039G15.1" gen_strand="+" ref_id="SGN-E209406" ref_strand="+">
        <total_alignment_score>0.977</total_alignment_score>
        <cumulative_length_of_scored_exons>281</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLe0039G15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E209406" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="21463" e_stop="21486"/>
          <exon e_start="21724" e_stop="21980"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGGATTTAACTTCAGTTGATGGGGTATGTTATTCTTCCCTTCTTTTTTATGATTATTTCCCCTCTGTTAACGACGGTTTCCTTTGAAAACTTTTGTTCTTTTGAGCACCTGTTTTATGGTGTAAATTATTTAGCATTAGGATGTGTTAAAATGGTGTTTGAGCGATGATGTAAAGCTAGTCAACCTTACCTTTGATTTAGCAAAAATGGTTTGTTGCAGTTAAAACTTGTGGTAGTTTCTTAATGTTTAATTCTTTCCAGGTTTGGCTAGCAGGTCAGTGAGTGGTTTTAAATTGGAGAAACATCCTCTTTAAACTATGTGTAGAGAGAGTTGTCATCTACTTGGGGGAGGTTTGGATTTTACATATATTTTCTTCTATTTATTGATGGAGTTGGTGTTGTAT-AAGTTACTTTTTCCCCTAGACTAGACATATTGGTGGTGGTGGATATATATATGTATACATGTTAATGTACAAGTCATACGTGGGCTCTCCATGACATTATTTGGTGTAAACATA</genome_strand>
        <mrna_strand>GAGGATTTAACTTCAGTTGATGGT.............................................................................................................................................................................................................................................TTTTGGCTAGCAGGTCAGTGAGTGGTTTTAAATTGGAGAAACATCCTCTTTAAACTATGTGTAGAGAGAGTTGTCATCTACTTGGGGGAGGTTTGGATTTTACATATATTTTCTTCTATTTATTGATGGAGCTGGTGTTGTATAAAGTTACTTTTTTCCCTAAACTAGACATATTGGTGGTGGTGGATATATATATGTATACATGTTAATGTACAAGTCATACGTGGGCTCTCCATGACATTATTTGGTGTAAACATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLe0039G15-FcnBD/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E687651" ref_strand="-" ref_description="SGN-E687651 [T3_tus_79_D24]">
      <seq>tttttttttttttttttttttttttttttttttacaaaatcccttttttttttcattaactccaggaacttttagcacacaattgcaccaagaagccacaaatattacacgctttcctcaattaatatgtgatcaagacgacatttaaacactattgctatccaaatgacttttcacatattgggattgagggagcagctaaaaaccagccatcagatagaacctgaattttgattttacagatcagggcatcattggcaaagtattatataagcacaggatcattttgcagcaaaaaattggctaagacagctgatgctaccaccttggcaaagtattatataagcacaggatcattttgcagcaaaaaattggccaagacagctgatgctaccacctagtgtaagtgcaacaaatatcatcttgaatgtttgaccgacattttgctcatttttttcgtgaaaaatcagagggataactttaccattgcaggctgttgtttaataagggaacgatgaataattgtcaagtcaggatcatccttgtgcttgtcccaagcggttttgaactgcgagcccttggatcttgacaatgaggggaaaatattaagaaattgaagaactcaataattagagagaaactacaacaagacaaaaaaagccatatcacatgaaggaagagaaaacagaagtaacagagcatgatatatactgttggatcaaaattatagtctgaagaacaagttttctgatttcttaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLe0039G15-FcnBD/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C06SLe0039G15.1" temp_strand="+" temp_description="C06SLe0039G15.1  AC216657.1 htgs_phase:1 submitted_to_sgn_as:C06SLe0039G15 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="23281" stop="33180"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="31142" g_stop="31172" g_length="31"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="31" r_length="31" r_score="0.613"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="31173" i_stop="32152" i_length="980">
            <donor d_prob="0.500" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="32153" g_stop="32880" g_length="728"/>
          <reference_exon_boundary r_type="cDNA" r_start="32" r_stop="759" r_length="728" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLe0039G15.1" gen_strand="+" ref_id="SGN-E687651" ref_strand="-">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>759</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLe0039G15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E687651" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="31142" e_stop="31172"/>
          <exon e_start="32153" e_stop="32880"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTTTCTTTCATTTTTCCCTTTTCACGTTTGGCATAGCAACTTCATCACTTTTATCCAAACACATAACTGCTTATTTTAAAAATAAGTTTCAGCACTTTTAAAAGTACTTTTTTAAAGCTGCTTTTATTAAGCCCATCCAAACGGACCCTAAAATAAGTACATCCCCATACGAAATTCTGCATTGTAACAGTATTATATCTTAAACTTGAAAGTATGCCTATGGGCGACTAACTATTTACATTGAGGCTGAGCCCAATCACTCTCAATCCCTTCGTTTGATGCACGGCATAACAAATCACAGCAATTGATAGGAATGGCAACTCGATACACTAAGTTCTCACTATGTGAGGAGTCCGAAAAAAGAGCCAGACTGCAAGGGTCTATTTGTATGCATTCTCACCCTCATATGGCGACAACTTTATCAGTTCCACCAAGATTCCCTAATTGAACAACCTGTAAATGCATAGAACAGCAATTAGACAAATGTTTCTGCCCATTCGTGAAAGTGAAAAAACGATCTCCCATTTCTCTCCACTTTGTACGAATGAAGTGCTAAAACAGGGAGTAGTGCAGATTATTTAGAGTATCAAACTGATGCAAGACCTGCATGTATACTTATCCAAAAGGCATAATACATAAACATGCACTCAAAATTCTATCTCAGTTGGTCAAGAAACACTCCAACTTTGCGTATGCACATCCAGACACCTCTACTTGTCTCCATTGTGTCAGTTGAACACTCCAACTTACAAAATGATCATCTAGACACCTCCAAAGGTCACGTCAGCCTTGGGTCTCCACAAGATACAGTGAGAACAAGTTGGGAGTGTATAGTTCCTAGCTCAAACAAAGTTGAAGTATCTAGACGTGCACTCTCAAATTTTGAGTGTTTATTTGCCAGCTAATGCCAAACTTGAGTCTCCTTGGCAACTCAAAAGGAGAAGGCAAGTATTCACATCCAGCAAACCACAAACCATTAACAGCTCCCAGCAAACAACATTAACAAACAGATACAAAATCCCTTTTTTATATCATTAACTCCAGGAACTTTTAGCACACAATTGCACCAAGAAGCCACAAATATTACACGCTTTCCTCAATTAATATGTGATCAAGACGACATTTAAACACTATTGCTATCCAAATGACTTTTCACATATTGGGATTGAGGGAGCAGCTAAAAACCAGCCATCAGATAGAACCTGAATTTTGATTTTACAGATCAGGGCATCATTGGCAAAGTATTATATAAGCACAGGATCATTTTGCAGCAAAAAATTGGCTAAGACAGCTGATGCTACCACCTTGGCAAAGTATTATATAAGCACAGGATCATTTTGCAGCAAAAAATTGGCCAAGACAGCTGATGCTACCACCTAGTGTAAGTGCAACAAATATCATCTTGAATGTTTGACCGACATTTTGCTCATTTTTCTCGTGAAAAATCAGAGGGATAACTTTACCATTGCAGGCTGTTGTTTAATAAGGGAACGATGAATAATTGTCAAGTCAGGATCATCCTTGTGCTTGTCCCAAGCGGTTTTGAACTGCGAGCCCTTGGATCTTGACAATGAGGGGAAAATATTAAGAAATTGAAGAACTCAATAATTAGAGAGAAACTACAACAAGACAAAAAAAGCCATATCACATGAAGGAAGAGAAAACAGAAGTAACAGAGCATGATATATACTGTTGGATCAAAATTATAGTCTGAAGAACAAGTTTTCTGATTTCTTCA</genome_strand>
        <mrna_strand>TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACAAAATCCCTTTTTTTTTTCATTAACTCCAGGAACTTTTAGCACACAATTGCACCAAGAAGCCACAAATATTACACGCTTTCCTCAATTAATATGTGATCAAGACGACATTTAAACACTATTGCTATCCAAATGACTTTTCACATATTGGGATTGAGGGAGCAGCTAAAAACCAGCCATCAGATAGAACCTGAATTTTGATTTTACAGATCAGGGCATCATTGGCAAAGTATTATATAAGCACAGGATCATTTTGCAGCAAAAAATTGGCTAAGACAGCTGATGCTACCACCTTGGCAAAGTATTATATAAGCACAGGATCATTTTGCAGCAAAAAATTGGCCAAGACAGCTGATGCTACCACCTAGTGTAAGTGCAACAAATATCATCTTGAATGTTTGACCGACATTTTGCTCATTTTTTTCGTGAAAAATCAGAGGGATAACTTTACCATTGCAGGCTGTTGTTTAATAAGGGAACGATGAATAATTGTCAAGTCAGGATCATCCTTGTGCTTGTCCCAAGCGGTTTTGAACTGCGAGCCCTTGGATCTTGACAATGAGGGGAAAATATTAAGAAATTGAAGAACTCAATAATTAGAGAGAAACTACAACAAGACAAAAAAAGCCATATCACATGAAGGAAGAGAAAACAGAAGTAACAGAGCATGATATATACTGTTGGATCAAAATTATAGTCTGAAGAACAAGTTTTCTGATTTCTTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLe0039G15-FcnBD/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E233998" ref_strand="+" ref_description="SGN-E233998 [cLEL-8-A21](-)">
      <seq>gcctgcaatggttgttcaattagggaatcttggtggaactgataaagttgtcgccatatgagggtgagaatgcatacaaatagacccttgcagtctggctcttttttcggactcctcacatagtgagaacttagtgtatcgagttgccattcctatcaattgctgtgatttgttatgccgtgcatcaaacgaagggattgagagtgattgggctcagcctcaatgtaaatagttagtcgcccataggcatactttcaagtttaagatataatactgttacaatgcagaatttcgtatggggatgtacttattttagggtccgtttggatgggcttaataaaagcagctttaaaaaagtaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLe0039G15-FcnBD/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C06SLe0039G15.1" temp_strand="-" temp_description="C06SLe0039G15.1  AC216657.1 htgs_phase:1 submitted_to_sgn_as:C06SLe0039G15 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="31905" stop="30947"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="31595" g_stop="31250" g_length="346"/>
          <reference_exon_boundary r_type="cDNA" r_start="11" r_stop="356" r_length="346" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="359" polyA_stop="377"/>
      <MATCH_line gen_id="C06SLe0039G15.1" gen_strand="-" ref_id="SGN-E233998" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>346</cumulative_length_of_scored_exons>
        <coverage percentage="0.918" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLe0039G15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E233998" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="31595" e_stop="31250"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTGTTCAATTAGGGAATCTTGGTGGAACTGATAAAGTTGTCGCCATATGAGGGTGAGAATGCATACAAATAGACCCTTGCAGTCTGGCTCTTTTTTCGGACTCCTCACATAGTGAGAACTTAGTGTATCGAGTTGCCATTCCTATCAATTGCTGTGATTTGTTATGCCGTGCATCAAACGAAGGGATTGAGAGTGATTGGGCTCAGCCTCAATGTAAATAGTTAGTCGCCCATAGGCATACTTTCAAGTTTAAGATATAATACTGTTACAATGCAGAATTTCGTATGGGGATGTACTTATTTTAGGGTCCGTTTGGATGGGCTTAATAAAAGCAGCTTTAAAAAA</genome_strand>
        <mrna_strand>GTTGTTCAATTAGGGAATCTTGGTGGAACTGATAAAGTTGTCGCCATATGAGGGTGAGAATGCATACAAATAGACCCTTGCAGTCTGGCTCTTTTTTCGGACTCCTCACATAGTGAGAACTTAGTGTATCGAGTTGCCATTCCTATCAATTGCTGTGATTTGTTATGCCGTGCATCAAACGAAGGGATTGAGAGTGATTGGGCTCAGCCTCAATGTAAATAGTTAGTCGCCCATAGGCATACTTTCAAGTTTAAGATATAATACTGTTACAATGCAGAATTTCGTATGGGGATGTACTTATTTTAGGGTCCGTTTGGATGGGCTTAATAAAAGCAGCTTTAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLe0039G15-FcnBD/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E234253" ref_strand="+" ref_description="SGN-E234253 [cLEL-8-A21](-)">
      <seq>atcttggtggaactgataaagttgtcgccatatgagggtgagaatgcatacaaatagacccttgcagtctggctcttttttcggactcctcacatagtgagaacttagtgtatcgagttgccattcctatcaattgctgtgatttgttatgccgtgcatcaaacgaagggattgagagtgattgggctcagcctcaatgtaaatagttagtcgcccataggcatactttcaagtttaagatataatactgttacaatgcagaatttcgtatggggatgtacttattttagggtccgtttggatgggcttaataaaagcagctttaaaaaagtccaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLe0039G15-FcnBD/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C06SLe0039G15.1" temp_strand="-" temp_description="C06SLe0039G15.1  AC216657.1 htgs_phase:1 submitted_to_sgn_as:C06SLe0039G15 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="31879" stop="30946"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="31579" g_stop="31250" g_length="330"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="330" r_length="330" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="335" polyA_stop="351"/>
      <MATCH_line gen_id="C06SLe0039G15.1" gen_strand="-" ref_id="SGN-E234253" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>330</cumulative_length_of_scored_exons>
        <coverage percentage="0.940" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLe0039G15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E234253" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="31579" e_stop="31250"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCTTGGTGGAACTGATAAAGTTGTCGCCATATGAGGGTGAGAATGCATACAAATAGACCCTTGCAGTCTGGCTCTTTTTTCGGACTCCTCACATAGTGAGAACTTAGTGTATCGAGTTGCCATTCCTATCAATTGCTGTGATTTGTTATGCCGTGCATCAAACGAAGGGATTGAGAGTGATTGGGCTCAGCCTCAATGTAAATAGTTAGTCGCCCATAGGCATACTTTCAAGTTTAAGATATAATACTGTTACAATGCAGAATTTCGTATGGGGATGTACTTATTTTAGGGTCCGTTTGGATGGGCTTAATAAAAGCAGCTTTAAAAAA</genome_strand>
        <mrna_strand>ATCTTGGTGGAACTGATAAAGTTGTCGCCATATGAGGGTGAGAATGCATACAAATAGACCCTTGCAGTCTGGCTCTTTTTTCGGACTCCTCACATAGTGAGAACTTAGTGTATCGAGTTGCCATTCCTATCAATTGCTGTGATTTGTTATGCCGTGCATCAAACGAAGGGATTGAGAGTGATTGGGCTCAGCCTCAATGTAAATAGTTAGTCGCCCATAGGCATACTTTCAAGTTTAAGATATAATACTGTTACAATGCAGAATTTCGTATGGGGATGTACTTATTTTAGGGTCCGTTTGGATGGGCTTAATAAAAGCAGCTTTAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLe0039G15-FcnBD/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E338438" ref_strand="+" ref_description="SGN-E338438 [cTOE-15-E18]">
      <seq>aaaggttggtggatgaacttgttagtctattcaaggaagcagcgctgaaaattgcacgtgaagaaatcagaaaacttgttcttcagactataattttgatccaacaatccaagggctcgcagttcaaaaccgcttgggacaagcacaaggatgatcctgacttgacaattattcatcgttcccttattaaacaacagcctgcaatggttgttcaattagggaatcttggtggaactgataaagttgtcgccatatgagggtgagaatgcatacaaatagacccttgcagtctggctcttttttcggactcctcacatagtgagaacttagtgtatcgagttgccattcctatcaattgctgtgatttgttatgccgtgcatcaaacgaagggattgagagtgattgggctcagcctcaatgtaaatagttagtcgcccataggcatactttcaagtttaagatataatact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLe0039G15-FcnBD/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C06SLe0039G15.1" temp_strand="-" temp_description="C06SLe0039G15.1  AC216657.1 htgs_phase:1 submitted_to_sgn_as:C06SLe0039G15 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="33236" stop="31031"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33208" g_stop="33205" g_length="4"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="4" r_length="4" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="33204" i_stop="32935" i_length="270">
            <donor d_prob="0.760" d_score="0.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="32934" g_stop="32833" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="5" r_stop="106" r_length="102" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="32832" i_stop="32706" i_length="127">
            <donor d_prob="0.951" d_score="1.00"/>
            <acceptor a_prob="0.871" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="32705" g_stop="32606" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="107" r_stop="206" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="32605" i_stop="31596" i_length="1010">
            <donor d_prob="0.765" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="31595" g_stop="31331" g_length="265"/>
          <reference_exon_boundary r_type="cDNA" r_start="207" r_stop="471" r_length="265" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLe0039G15.1" gen_strand="-" ref_id="SGN-E338438" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>471</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLe0039G15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E338438" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33208" e_stop="33205"/>
          <exon e_start="32934" e_stop="32833"/>
          <exon e_start="32705" e_stop="32606"/>
          <exon e_start="31595" e_stop="31331"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAGGTTATTTACGAAGGAATATTAGGAGTCACCCTGAATTTTACTTATATCTGCTGTTAATGTGAAGAATGGATTACGCTAAAAGTTGCAAATAAATCCAGTAGTGTATTTTTTCGTTCCTGAATTCCAGTTTTGCATCTGAACTGAGGACCCCTTTTTTCAACAGTTAAATCATCTTAACTGATGATGGATTAACATCCCTAGCGTTAAACTAGAACCTTCCTACATGCTCTTGTCTTGCTTCTTTAAATTGTATTGGTCGGTGTGATGCAGGTTGGTGGATGAACTTGTTAGTCTATTCAAGGAAGCAGCGCTGAAAATTGCACGTGAAGAAATCAGAAAACTTGTTCTTCAGACTATAATTTTGATCCAACAGTATATATCATGCTCTGTTACTTCTGTTTTCTCTTCCTTCATGTGATATGGCTTTTTTTGTCTTGTTGTAGTTTCTCTCTAATTATTGAGTTCTTCAATTTCTTAATATTTTCCCCTCATTGTCAAGATCCAAGGGCTCGCAGTTCAAAACCGCTTGGGACAAGCACAAGGATGATCCTGACTTGACAATTATTCATCGTTCCCTTATTAAACAACAGCCTGCAATGGTAAAGTTATCCCTCTGATTTTTCACGAGAAAAATGAGCAAAATGTCGGTCAAACATTCAAGATGATATTTGTTGCACTTACACTAGGTGGTAGCATCAGCTGTCTTGGCCAATTTTTTGCTGCAAAATGATCCTGTGCTTATATAATACTTTGCCAAGGTGGTAGCATCAGCTGTCTTAGCCAATTTTTTGCTGCAAAATGATCCTGTGCTTATATAATACTTTGCCAATGATGCCCTGATCTGTAAAATCAAAATTCAGGTTCTATCTGATGGCTGGTTTTTAGCTGCTCCCTCAATCCCAATATGTGAAAAGTCATTTGGATAGCAATAGTGTTTAAATGTCGTCTTGATCACATATTAATTGAGGAAAGCGTGTAATATTTGTGGCTTCTTGGTGCAATTGTGTGCTAAAAGTTCCTGGAGTTAATGATATAAAAAAGGGATTTTGTATCTGTTTGTTAATGTTGTTTGCTGGGAGCTGTTAATGGTTTGTGGTTTGCTGGATGTGAATACTTGCCTTCTCCTTTTGAGTTGCCAAGGAGACTCAAGTTTGGCATTAGCTGGCAAATAAACACTCAAAATTTGAGAGTGCACGTCTAGATACTTCAACTTTGTTTGAGCTAGGAACTATACACTCCCAACTTGTTCTCACTGTATCTTGTGGAGACCCAAGGCTGACGTGACCTTTGGAGGTGTCTAGATGATCATTTTGTAAGTTGGAGTGTTCAACTGACACAATGGAGACAAGTAGAGGTGTCTGGATGTGCATACGCAAAGTTGGAGTGTTTCTTGACCAACTGAGATAGAATTTTGAGTGCATGTTTATGTATTATGCCTTTTGGATAAGTATACATGCAGGTCTTGCATCAGTTTGATACTCTAAATAATCTGCACTACTCCCTGTTTTAGCACTTCATTCGTACAAAGTGGAGAGAAATGGGAGATCGTTTTTTCACTTTCACGAATGGGCAGAAACATTTGTCTAATTGCTGTTCTATGCATTTACAGGTTGTTCAATTAGGGAATCTTGGTGGAACTGATAAAGTTGTCGCCATATGAGGGTGAGAATGCATACAAATAGACCCTTGCAGTCTGGCTCTTTTTTCGGACTCCTCACATAGTGAGAACTTAGTGTATCGAGTTGCCATTCCTATCAATTGCTGTGATTTGTTATGCCGTGCATCAAACGAAGGGATTGAGAGTGATTGGGCTCAGCCTCAATGTAAATAGTTAGTCGCCCATAGGCATACTTTCAAGTTTAAGATATAATACT</genome_strand>
        <mrna_strand>AAAG..............................................................................................................................................................................................................................................................................GTTGGTGGATGAACTTGTTAGTCTATTCAAGGAAGCAGCGCTGAAAATTGCACGTGAAGAAATCAGAAAACTTGTTCTTCAGACTATAATTTTGATCCAACA...............................................................................................................................ATCCAAGGGCTCGCAGTTCAAAACCGCTTGGGACAAGCACAAGGATGATCCTGACTTGACAATTATTCATCGTTCCCTTATTAAACAACAGCCTGCAATG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTTCAATTAGGGAATCTTGGTGGAACTGATAAAGTTGTCGCCATATGAGGGTGAGAATGCATACAAATAGACCCTTGCAGTCTGGCTCTTTTTTCGGACTCCTCACATAGTGAGAACTTAGTGTATCGAGTTGCCATTCCTATCAATTGCTGTGATTTGTTATGCCGTGCATCAAACGAAGGGATTGAGAGTGATTGGGCTCAGCCTCAATGTAAATAGTTAGTCGCCCATAGGCATACTTTCAAGTTTAAGATATAATACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLe0039G15-FcnBD/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E320785" ref_strand="+" ref_description="SGN-E320785 [cTOB-27-O17]">
      <seq>aagaaatcagaaaacttgttcttcagactataattttgatccaacagtatatatcatgctctgttacttctgttttctcttccttcatgtgatatggctttttttgtcttgttgtagtttctctctaattattgagttcttcaatttcttaatattttcccctcattgtcaagatccaagggctcgcagttcaaaaccgcttgggacaagcacaaggatgatcctgacttgacaattattcatcgttcccttattaaacaacagcctgcaatggtaaagttatccctctgatttttcacgagaaaaatgagcaaaatgtcggtcaaacattcaagatgatatttgttgcacttacactaggtggtagcatcagctgtcttggccaattttttgctgcaaaatgatcctgtgcttatataatactttgccaaggtggtagcatcagctgtcttagccaattttttgctgcaaaatgatcctgtgcttatataatactttgccaatgatgccctgatctgtaaatcaaaattcaggttctatctgatggctggtttttagctgctccctcatcccaatatgtgaaaagtcatttggatagcatagtgtttaaatgtcgtcttgatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLe0039G15-FcnBD/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C06SLe0039G15.1" temp_strand="-" temp_description="C06SLe0039G15.1  AC216657.1 htgs_phase:1 submitted_to_sgn_as:C06SLe0039G15 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="33178" stop="31952"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="32878" g_stop="32252" g_length="627"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="624" r_length="624" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLe0039G15.1" gen_strand="-" ref_id="SGN-E320785" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>627</cumulative_length_of_scored_exons>
        <coverage percentage="1.005" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLe0039G15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E320785" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="32878" e_stop="32252"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGAAATCAGAAAACTTGTTCTTCAGACTATAATTTTGATCCAACAGTATATATCATGCTCTGTTACTTCTGTTTTCTCTTCCTTCATGTGATATGGCTTTTTTTGTCTTGTTGTAGTTTCTCTCTAATTATTGAGTTCTTCAATTTCTTAATATTTTCCCCTCATTGTCAAGATCCAAGGGCTCGCAGTTCAAAACCGCTTGGGACAAGCACAAGGATGATCCTGACTTGACAATTATTCATCGTTCCCTTATTAAACAACAGCCTGCAATGGTAAAGTTATCCCTCTGATTTTTCACGAGAAAAATGAGCAAAATGTCGGTCAAACATTCAAGATGATATTTGTTGCACTTACACTAGGTGGTAGCATCAGCTGTCTTGGCCAATTTTTTGCTGCAAAATGATCCTGTGCTTATATAATACTTTGCCAAGGTGGTAGCATCAGCTGTCTTAGCCAATTTTTTGCTGCAAAATGATCCTGTGCTTATATAATACTTTGCCAATGATGCCCTGATCTGTAAAATCAAAATTCAGGTTCTATCTGATGGCTGGTTTTTAGCTGCTCCCTCAATCCCAATATGTGAAAAGTCATTTGGATAGCAATAGTGTTTAAATGTCGTCTTGATC</genome_strand>
        <mrna_strand>AAGAAATCAGAAAACTTGTTCTTCAGACTATAATTTTGATCCAACAGTATATATCATGCTCTGTTACTTCTGTTTTCTCTTCCTTCATGTGATATGGCTTTTTTTGTCTTGTTGTAGTTTCTCTCTAATTATTGAGTTCTTCAATTTCTTAATATTTTCCCCTCATTGTCAAGATCCAAGGGCTCGCAGTTCAAAACCGCTTGGGACAAGCACAAGGATGATCCTGACTTGACAATTATTCATCGTTCCCTTATTAAACAACAGCCTGCAATGGTAAAGTTATCCCTCTGATTTTTCACGAGAAAAATGAGCAAAATGTCGGTCAAACATTCAAGATGATATTTGTTGCACTTACACTAGGTGGTAGCATCAGCTGTCTTGGCCAATTTTTTGCTGCAAAATGATCCTGTGCTTATATAATACTTTGCCAAGGTGGTAGCATCAGCTGTCTTAGCCAATTTTTTGCTGCAAAATGATCCTGTGCTTATATAATACTTTGCCAATGATGCCCTGATCTGT-AAATCAAAATTCAGGTTCTATCTGATGGCTGGTTTTTAGCTGCTCCCTC-ATCCCAATATGTGAAAAGTCATTTGGATAGC-ATAGTGTTTAAATGTCGTCTTGATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLe0039G15-FcnBD/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E208546" ref_strand="+" ref_description="SGN-E208546 [cLEC-39-N15]">
      <seq>aaagacctatctaaagcttatgctaccatggctgctgggaatcatgacctgatcaaatttggcgagctggatcttgattttaagcctctcccaaatgataaaatcttggccatacacttaatccctcaactcttgcctttgctaaaagacacgattaaagagagtgccattgataaatcaattgatggtcatgagatatcagctgcaagcgctagtgttcctgtagcatatgccattattgctgcttatcagtttagatggctcatttctcaggtggattatcctcaccttggaaaagtgtgctcttgggtgattccatgtgccctaacagctcttgatcactggtcgtctgaagtaaagggacagggcatgattagcttaatatatctggcgaaaaatgtcaatgcggctgagattggttggtatgaagatgtaattcttgatgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLe0039G15-FcnBD/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C06SLe0039G15.1" temp_strand="-" temp_description="C06SLe0039G15.1  AC216657.1 htgs_phase:1 submitted_to_sgn_as:C06SLe0039G15 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="36049" stop="34232"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="35749" g_stop="35477" g_length="273"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="273" r_length="273" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="35476" i_stop="35358" i_length="119">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35357" g_stop="35271" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="274" r_stop="360" r_length="87" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35270" i_stop="34618" i_length="653">
            <donor d_prob="0.705" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34617" g_stop="34532" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="361" r_stop="446" r_length="86" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLe0039G15.1" gen_strand="-" ref_id="SGN-E208546" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>446</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLe0039G15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E208546" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="35749" e_stop="35477"/>
          <exon e_start="35357" e_stop="35271"/>
          <exon e_start="34617" e_stop="34532"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAGACCTATCTAAAGCTTATGCTACCATGGCTGCTGGGAATCATGACCTGATCAAATTTGGCGAGCTGGATCTTGATTTTAAGCCTCTCCCAAATGATAAAATCTTGGCCATACACTTAATCCCTCAACTCTTGCCTTTGCTAAAAGACACGATTAAAGAGAGTGCCATTGATAAATCAATTGATGGTCATGAGATATCAGCTGCAAGCGCTAGTGTTCCTGTAGCATATGCCATTATTGCTGCTTATCAGTTTAGATGGCTCATTTCTCAGGTATGTATATCCTTAATTGGTACTTGAAAGATTTATTTGTATGATTAATTTCTTCAGTTGGTGGTTGGAATTCTATTGAGATGAAATGTATTATATCCTTCTATATTTATCATTTGTAGGTGGATTATCCTCACCTTGGAAAAGTGTGCTCTTGGGTGATTCCATGTGCCCTAACAGCTCTTGATCACTGGTCGTCTGAAGTAAAGGTGCATTTGTCGTTGTATGTTTGCAGGTCTTAGAAATTTGTTGCTGTTTCAATCAGATATCTCACGTACTTGTTGATCGGTGCTTCAAACTATGCTGATAGTCCTATATAACCTTAAAATAGTTAAAACCCTCTAAATAGTGTAAAACTGTTGATTCTTGCAGTGATCCATCAATACTGTGAACGAGTTAGATAATTAGATATTCTAATTGGTGATCCCACTTTTCCTAAATCACTATAAATCAAGTATTAGCTAGCTAGTACTAAACTTGTAAGTGCTTCTACTATTTGGCACATTTCTGAGCTCTTAGCAACTGATGACAACAAAAAGAACATCAAAGATCATGTTTCAGTTTCTTTTCTAAAGCTTGTCCGTGGATACTCTATTAGAGACTTCTGACTGCAATAATGTTGATTGTACCTCTCTCAGTTTATCTTTCCTTTTTAGTCATTTTTCTTCTTCTTCTTCTTCTTAGTAATTACCTTTCTGGCTTAGTCGTTTGGAGCATGATGTAATCCATCTTCAAGCTTAAAATGGTATGTCAAATTGTTACTAGCAAGTGGTAATTGTCTGCTACACATTTGCATCTCATGATTAAGATTAATATTTTTGCTTTCATTAGGTTGTTGACTAAATGTTGTCTCTTACTTCAGGGACAGGGCATGATTAGCTTAATATATCTGGCGAAAAATGTCAATGCGGCTGAGATTGGTTGGTATGAAGATGTAATTCTTGATGC</genome_strand>
        <mrna_strand>AAAGACCTATCTAAAGCTTATGCTACCATGGCTGCTGGGAATCATGACCTGATCAAATTTGGCGAGCTGGATCTTGATTTTAAGCCTCTCCCAAATGATAAAATCTTGGCCATACACTTAATCCCTCAACTCTTGCCTTTGCTAAAAGACACGATTAAAGAGAGTGCCATTGATAAATCAATTGATGGTCATGAGATATCAGCTGCAAGCGCTAGTGTTCCTGTAGCATATGCCATTATTGCTGCTTATCAGTTTAGATGGCTCATTTCTCAG.......................................................................................................................GTGGATTATCCTCACCTTGGAAAAGTGTGCTCTTGGGTGATTCCATGTGCCCTAACAGCTCTTGATCACTGGTCGTCTGAAGTAAAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGACAGGGCATGATTAGCTTAATATATCTGGCGAAAAATGTCAATGCGGCTGAGATTGGTTGGTATGAAGATGTAATTCTTGATGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLe0039G15-FcnBD/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E368582" ref_strand="+" ref_description="SGN-E368582 [TUS-23-F24]">
      <seq>gattgcaaattttttttctctctcgcgactgcaattttttctctctcgtgattgcaatttttttcggtgacttcaattttctctcgccattgcaatttaaaggttagtgttgagtaagatctgttattttaggttacttgcattgcaatctgcgatttttgttggtttcctttgcacttaactgatcctttaatgtgagcttgcaattgtggtcttgacagtgcccagatcgttacgcctttcttctttttgtgtggatttatgttgagatttcgtttgatttatgtttacgttacttgtgtgcctttttgtttgatgatttatgttgagatttcgtttgattcaagttcctgtgagtgtctggtattcagctctcttctctaataagtatgatctcttgttagcatctgtgtaatacaactttaattcaggtttaattcactttttagcatttatgtaatacaacttcaattcagttttagttcacttgttagcatccgtgtaatacaactttaattccggtttaattcaattgttaacatctgtgtaatacaactttaattcaagtttgattcacttgttagcatccgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLe0039G15-FcnBD/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C06SLe0039G15.1" temp_strand="+" temp_description="C06SLe0039G15.1  AC216657.1 htgs_phase:1 submitted_to_sgn_as:C06SLe0039G15 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="38020" stop="39208"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="38319" g_stop="38908" g_length="590"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="591" r_length="591" r_score="0.961"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLe0039G15.1" gen_strand="+" ref_id="SGN-E368582" ref_strand="+">
        <total_alignment_score>0.961</total_alignment_score>
        <cumulative_length_of_scored_exons>590</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLe0039G15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E368582" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="38319" e_stop="38908"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATTGC-AATTTTT-TTCTCTCTCGCGACTGCAATTTTTTCTCTCTCGTGATTGCAATTTTTTTTCGACGACTTCAATTTTCTCTCGCCATTGCAATTTAAAGGTTAGTGTTGAGTAAGATCTGTTAGTTTAGGTTACTTGCACTGCATTCTGCTATTTTTGTTGGTCTCCATTGCACTTAACTGATCCTTTAATGTGAGCTTGCAATTGTGGTATTGACAGTGCCCAGATCGTTACGCCTTTCTTCTTTTTGTGTGGATTTATGTTGAGATTTCGTTTGATTTATGTTTACGTTACTTGTGTGCCTTTTTGTTTGATGATTTATGTTGAGATTTCGTTTGATTCAAGTTCCTGTGAGTGTCTGGTATTCAGTTCTCTTCTCTAATAAGTATGATCTCTTGTTAGCATCTGTGTAATACAACTTTAATTCAGGTTTAATTCACTTTTTAGCATTTGTGTAATACAACTTCAATTCAGTTTTAGTTCACTTGTTAGCATCCGTGTAATACAATTTTAATTCCGATTTAATTCACTTGTTAACATCTCTGTAATACAACTTTAATTCAAGTTTAATTCACTTGTTAGCATCTGT</genome_strand>
        <mrna_strand>GATTGCAAATTTTTTTTCTCTCTCGCGACTGCAATTTTTTCTCTCTCGTGATTGCAA-TTTTTTTCGGTGACTTCAATTTTCTCTCGCCATTGCAATTTAAAGGTTAGTGTTGAGTAAGATCTGTTATTTTAGGTTACTTGCATTGCAATCTGCGATTTTTGTTGGTTTCCTTTGCACTTAACTGATCCTTTAATGTGAGCTTGCAATTGTGGTCTTGACAGTGCCCAGATCGTTACGCCTTTCTTCTTTTTGTGTGGATTTATGTTGAGATTTCGTTTGATTTATGTTTACGTTACTTGTGTGCCTTTTTGTTTGATGATTTATGTTGAGATTTCGTTTGATTCAAGTTCCTGTGAGTGTCTGGTATTCAGCTCTCTTCTCTAATAAGTATGATCTCTTGTTAGCATCTGTGTAATACAACTTTAATTCAGGTTTAATTCACTTTTTAGCATTTATGTAATACAACTTCAATTCAGTTTTAGTTCACTTGTTAGCATCCGTGTAATACAACTTTAATTCCGGTTTAATTCAATTGTTAACATCTGTGTAATACAACTTTAATTCAAGTTTGATTCACTTGTTAGCATCCGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLe0039G15-FcnBD/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E243672" ref_strand="+" ref_description="SGN-E243672 [cLED-34-H18]">
      <seq>gattgcaaattttttttctctctcgcgactgcaattttttctctctcgtgattgcaatttttttcggtgacttcaattttctctcgccattgcaatttaaaggttagtgttgagtaagatctgttattttaggttacttgcattgcaatctgcgatttttgttggtttcctttgcacttaactgatcctttaatgtgagcttgcaattgtggtcttgacagtgcccagatcgttacgcctttcttctttttgtgtggatttatgttgagatttcgtttgatttatgtttacgttacttgtgtgcctttttgtttgatgatttatgttgagatttcgtttgattcaagttcctgtgagtgtctggtattcagctctcttctctaataagtatgatctcttgttagcatctgtgtaatacaactttaattcaggtttaattcactttttagcatttatgtaatacaacttcaattcagttttagttcacttgttagcatccgtgtaatacaactttaattccggtttaattcaattgttaacatctgtgtaata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLe0039G15-FcnBD/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C06SLe0039G15.1" temp_strand="+" temp_description="C06SLe0039G15.1  AC216657.1 htgs_phase:1 submitted_to_sgn_as:C06SLe0039G15 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="38020" stop="39169"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="38319" g_stop="38869" g_length="551"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="552" r_length="552" r_score="0.962"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLe0039G15.1" gen_strand="+" ref_id="SGN-E243672" ref_strand="+">
        <total_alignment_score>0.962</total_alignment_score>
        <cumulative_length_of_scored_exons>551</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLe0039G15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E243672" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="38319" e_stop="38869"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATTGC-AATTTTT-TTCTCTCTCGCGACTGCAATTTTTTCTCTCTCGTGATTGCAATTTTTTTTCGACGACTTCAATTTTCTCTCGCCATTGCAATTTAAAGGTTAGTGTTGAGTAAGATCTGTTAGTTTAGGTTACTTGCACTGCATTCTGCTATTTTTGTTGGTCTCCATTGCACTTAACTGATCCTTTAATGTGAGCTTGCAATTGTGGTATTGACAGTGCCCAGATCGTTACGCCTTTCTTCTTTTTGTGTGGATTTATGTTGAGATTTCGTTTGATTTATGTTTACGTTACTTGTGTGCCTTTTTGTTTGATGATTTATGTTGAGATTTCGTTTGATTCAAGTTCCTGTGAGTGTCTGGTATTCAGTTCTCTTCTCTAATAAGTATGATCTCTTGTTAGCATCTGTGTAATACAACTTTAATTCAGGTTTAATTCACTTTTTAGCATTTGTGTAATACAACTTCAATTCAGTTTTAGTTCACTTGTTAGCATCCGTGTAATACAATTTTAATTCCGATTTAATTCACTTGTTAACATCTCTGTAATA</genome_strand>
        <mrna_strand>GATTGCAAATTTTTTTTCTCTCTCGCGACTGCAATTTTTTCTCTCTCGTGATTGCAA-TTTTTTTCGGTGACTTCAATTTTCTCTCGCCATTGCAATTTAAAGGTTAGTGTTGAGTAAGATCTGTTATTTTAGGTTACTTGCATTGCAATCTGCGATTTTTGTTGGTTTCCTTTGCACTTAACTGATCCTTTAATGTGAGCTTGCAATTGTGGTCTTGACAGTGCCCAGATCGTTACGCCTTTCTTCTTTTTGTGTGGATTTATGTTGAGATTTCGTTTGATTTATGTTTACGTTACTTGTGTGCCTTTTTGTTTGATGATTTATGTTGAGATTTCGTTTGATTCAAGTTCCTGTGAGTGTCTGGTATTCAGCTCTCTTCTCTAATAAGTATGATCTCTTGTTAGCATCTGTGTAATACAACTTTAATTCAGGTTTAATTCACTTTTTAGCATTTATGTAATACAACTTCAATTCAGTTTTAGTTCACTTGTTAGCATCCGTGTAATACAACTTTAATTCCGGTTTAATTCAATTGTTAACATCTGTGTAATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLe0039G15-FcnBD/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E253404" ref_strand="-" ref_description="SGN-E253404 [cLEG-24-G18]">
      <seq>gtgaactaaaattgaattgaagttgtattacacaaatactaacaagtgaattaaacatgaattaaagctgtattacactaatgctaacaagtgaattaaacttgaattaaaattgtattacacagatgttaacaagtgaattaaatcggaattaaagttgtattacacggatgctaacaagtgaatcaaacttgaattaaagttgtattacacagatgttaacaattgaattaaaccggaattaaagttgtattacacggatgctaacaagtgaactaaaactgaattgaagttgtattacataaatgctaaaaagtgaattaaacctgaattaaagttgtattacacagatgctaacaagagatcatacttattagagaagagagctgaataccagacactcacaggaacttgaatcaaacgaaatctcaacataaatcatcaaacaaaaaggcacacaagtaacgtaaacataaatcaaacgaaatctcaacat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLe0039G15-FcnBD/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C06SLe0039G15.1" temp_strand="-" temp_description="C06SLe0039G15.1  AC216657.1 htgs_phase:1 submitted_to_sgn_as:C06SLe0039G15 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="39374" stop="38279"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="39299" g_stop="39130" g_length="170"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="170" r_length="170" r_score="0.935"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="39129" i_stop="38905" i_length="225">
            <donor d_prob="0.000" d_score="0.98"/>
            <acceptor a_prob="0.098" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="38904" g_stop="38579" g_length="326"/>
          <reference_exon_boundary r_type="cDNA" r_start="171" r_stop="496" r_length="326" r_score="0.979"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLe0039G15.1" gen_strand="-" ref_id="SGN-E253404" ref_strand="-">
        <total_alignment_score>0.964</total_alignment_score>
        <cumulative_length_of_scored_exons>496</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLe0039G15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E253404" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="39299" e_stop="39130"/>
          <exon e_start="38904" e_stop="38579"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGAACTAAAACTGAATTAAAGTTGTATTACACAAATGCTAACAAGTGAATTAAACATGAATTAAATCTGTATTACACAGATGCTAACAAGTGAATTAAACTTTTTTTAAAGTTGTATTACACAGATGTTAACAAGTGAATTAAACCGGAATTAAAGTTGTATTACACGGATGCTAACAAGTGAATTAAACATGAATTAAAGCTGTATTACACAGATGTTAACAAGTGAATTATACTTGAATTAAAATTGTATTACACAGATGCTAACAAGTGAACTAAAACTGAATTGAAGTTGTATTACACAAATGCTAAAAAGTGAATTAAACCTGAATTAAAGTTGTATTACACAGATGCTAACAAGTAAAATAAAACTGAATTGAAGTTGTATTACACAGATGCTAACAAGTGAATTAAACTTGAATTAAAGTTGTATTACAGAGATGTTAACAAGTGAATTAAATCGGAATTAAAATTGTATTACACGGATGCTAACAAGTGAACTAAAACTGAATTGAAGTTGTATTACACAAATGCTAAAAAGTGAATTAAACCTGAATTAAAGTTGTATTACACAGATGCTAACAAGAGATCATACTTATTAGAGAAGAGAACTGAATACCAGACACTCACAGGAACTTGAATCAAACGAAATCTCAACATAAATCATCAAACAAAAAGGCACACAAGTAACGTAAACATAAATCAAACGAAATCTCAACAT</genome_strand>
        <mrna_strand>GTGAACTAAAATTGAATTGAAGTTGTATTACACAAATACTAACAAGTGAATTAAACATGAATTAAAGCTGTATTACACTAATGCTAACAAGTGAATTAAACTTGAATTAAAATTGTATTACACAGATGTTAACAAGTGAATTAAATCGGAATTAAAGTTGTATTACACGG.................................................................................................................................................................................................................................ATGCTAACAAGTGAATCAAACTTGAATTAAAGTTGTATTACACAGATGTTAACAATTGAATTAAACCGGAATTAAAGTTGTATTACACGGATGCTAACAAGTGAACTAAAACTGAATTGAAGTTGTATTACATAAATGCTAAAAAGTGAATTAAACCTGAATTAAAGTTGTATTACACAGATGCTAACAAGAGATCATACTTATTAGAGAAGAGAGCTGAATACCAGACACTCACAGGAACTTGAATCAAACGAAATCTCAACATAAATCATCAAACAAAAAGGCACACAAGTAACGTAAACATAAATCAAACGAAATCTCAACAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLe0039G15-FcnBD/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E367812" ref_strand="+" ref_description="SGN-E367812 [TUS-22-A7](-)">
      <seq>cacatgtgggagatttcaattgaatgagttaccatgtccacatgctttggccgttttaacaataaaacacactggttatgaaaaatattgttcggctaactatacaagaaaatatttattgttgacatatcaatttcaaatggatctcctgccaaatgaaagtacatggaacacaccaacacatgtttatgaagatgttgtacttccatctcttgaaaatagacctccgggaaggccaaaaaataaaagacatactcaactgagagaagatggattcaagaaggcgaaaattacatgcagcaattgtggacaacatgatcacaacaggaagacttgcaaaaatgtcaggccttatgatcaagaataaaaaatacaatttgttttagtagtttgttttagaagctcattgactctacgaatttggatcatgttcggttatatggtttatatttttagtttcgcaatctcgtgctattcagtttaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLe0039G15-FcnBD/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C06SLe0039G15.1" temp_strand="+" temp_description="C06SLe0039G15.1  AC216657.1 htgs_phase:1 submitted_to_sgn_as:C06SLe0039G15 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="41509" stop="42596"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="41809" g_stop="42298" g_length="490"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="491" r_length="491" r_score="0.937"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLe0039G15.1" gen_strand="+" ref_id="SGN-E367812" ref_strand="+">
        <total_alignment_score>0.937</total_alignment_score>
        <cumulative_length_of_scored_exons>490</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLe0039G15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E367812" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="41809" e_stop="42298"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CACATGTGGGAGATTTCAATTGGATGAGTTACCATGTCCACATGCTTTTGCCGTTTTAACAATAAAACACATTGGTTATGAGAAATATTGTTCGGCTTACTATACAAGAAAAAATTTATTGTTGACATATCAATTTCAAATGGATCCCCTGCCAAATGAAAGTACATGGAACACAGCAACACATGTTCTTGAAAATGTTGTACTTCCACCTCATGGAAAGAGACCTCCGGGAAGGCCAAAAAATAAAAGACATACTC-ACTGAGAGAAGATGGATTCAAGAAGGCGAAAATTACATGCAGCAATTGTGGACAATATGATCACAACAAGAAGACTTGCAAAAATGTCAGGCCTTATGATCAAGAATAAAAAAAATAATTTGTTTTATTAGTTTGTTTTAGAAGCTCATTGACTCTACGAATTTGGATCATGTTCGGTTATATGGTTTATATTCTTAGTTCTGCATTCTCGTGTTATTCAGTTTAATAGAATG</genome_strand>
        <mrna_strand>CACATGTGGGAGATTTCAATTGAATGAGTTACCATGTCCACATGCTTTGGCCGTTTTAACAATAAAACACACTGGTTATGAAAAATATTGTTCGGCTAACTATACAAGAAAATATTTATTGTTGACATATCAATTTCAAATGGATCTCCTGCCAAATGAAAGTACATGGAACACACCAACACATGTTTATGAAGATGTTGTACTTCCATCTCTTGAAAATAGACCTCCGGGAAGGCCAAAAAATAAAAGACATACTCAACTGAGAGAAGATGGATTCAAGAAGGCGAAAATTACATGCAGCAATTGTGGACAACATGATCACAACAGGAAGACTTGCAAAAATGTCAGGCCTTATGATCAAGAATAAAAAATACAATTTGTTTTAGTAGTTTGTTTTAGAAGCTCATTGACTCTACGAATTTGGATCATGTTCGGTTATATGGTTTATATTTTTAGTTTCGCAATCTCGTGCTATTCAGTTTAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLe0039G15-FcnBD/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E392488" ref_strand="+" ref_description="SGN-E392488 [TUS-36-K12](-)">
      <seq>ccccccccccccccatgtccacatagtttggcggctttaacaataaaacacactggttatgagaaatattgttcggctaactatacaagaaaatatttattgttgacatatcaatttcaaaaagatctcctgccaaatgaaagtacatggaacacaccaacacatgtttatgaagatgttgtacttccatctcttggaaatagacctccgggaaggccaaaaaataaaagacatactcaactgagagaagatggattcaagaaggcgaaaattacatgcagcaattgtggacaacatgatcacaacaggaagacttgcaaaaatgtcaggccttatgatcaagaataaaaaatacaatttgttttagtagtttgttttagaagctcattgactctacgaatttggatcatgttcggttatatggtttatatttttagtttcgcaatctcgtgctattcagtttaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLe0039G15-FcnBD/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C06SLe0039G15.1" temp_strand="+" temp_description="C06SLe0039G15.1  AC216657.1 htgs_phase:1 submitted_to_sgn_as:C06SLe0039G15 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="41540" stop="42596"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="41841" g_stop="42299" g_length="459"/>
          <reference_exon_boundary r_type="cDNA" r_start="14" r_stop="473" r_length="460" r_score="0.924"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLe0039G15.1" gen_strand="+" ref_id="SGN-E392488" ref_strand="+">
        <total_alignment_score>0.924</total_alignment_score>
        <cumulative_length_of_scored_exons>459</cumulative_length_of_scored_exons>
        <coverage percentage="0.970" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLe0039G15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E392488" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="41841" e_stop="42299"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATGTCCACATGCTTTTGCCGTTTTAACAATAAAACACATTGGTTATGAGAAATATTGTTCGGCTTACTATACAAGAAAAAATTTATTGTTGACATATCAATTTCAAATGGATCCCCTGCCAAATGAAAGTACATGGAACACAGCAACACATGTTCTTGAAAATGTTGTACTTCCACCTCATGGAAAGAGACCTCCGGGAAGGCCAAAAAATAAAAGACATACTC-ACTGAGAGAAGATGGATTCAAGAAGGCGAAAATTACATGCAGCAATTGTGGACAATATGATCACAACAAGAAGACTTGCAAAAATGTCAGGCCTTATGATCAAGAATAAAAAAAATAATTTGTTTTATTAGTTTGTTTTAGAAGCTCATTGACTCTACGAATTTGGATCATGTTCGGTTATATGGTTTATATTCTTAGTTCTGCATTCTCGTGTTATTCAGTTTAATAGAATGC</genome_strand>
        <mrna_strand>CATGTCCACATAGTTTGGCGGCTTTAACAATAAAACACACTGGTTATGAGAAATATTGTTCGGCTAACTATACAAGAAAATATTTATTGTTGACATATCAATTTCAAAAAGATCTCCTGCCAAATGAAAGTACATGGAACACACCAACACATGTTTATGAAGATGTTGTACTTCCATCTCTTGGAAATAGACCTCCGGGAAGGCCAAAAAATAAAAGACATACTCAACTGAGAGAAGATGGATTCAAGAAGGCGAAAATTACATGCAGCAATTGTGGACAACATGATCACAACAGGAAGACTTGCAAAAATGTCAGGCCTTATGATCAAGAATAAAAAATACAATTTGTTTTAGTAGTTTGTTTTAGAAGCTCATTGACTCTACGAATTTGGATCATGTTCGGTTATATGGTTTATATTTTTAGTTTCGCAATCTCGTGCTATTCAGTTTAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLe0039G15-FcnBD/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E223449" ref_strand="+" ref_description="SGN-E223449 [cLEL-14-I9](-)">
      <seq>tcaagggaagataggtgcaagcacaggtggacgctaaagctacaggttcgttgttgcagctatccggacatcagtattcatccggagtttggtaggtcctcatgctttcgaggatgctaccgttttacattctagcgtagttttagagttgagctagcggagcatgttccactagcgtttctttcctgttttggttcaaactttgtattggcgctattttggccgatatacaagtaatacttaatgaattatttctttcagttgcttaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLe0039G15-FcnBD/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C06SLe0039G15.1" temp_strand="-" temp_description="C06SLe0039G15.1  AC216657.1 htgs_phase:1 submitted_to_sgn_as:C06SLe0039G15 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="59232" stop="23281"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="58929" g_stop="58655" g_length="275"/>
          <reference_exon_boundary r_type="cDNA" r_start="15" r_stop="289" r_length="275" r_score="0.913"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLe0039G15.1" gen_strand="-" ref_id="SGN-E223449" ref_strand="+">
        <total_alignment_score>0.913</total_alignment_score>
        <cumulative_length_of_scored_exons>275</cumulative_length_of_scored_exons>
        <coverage percentage="0.952" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLe0039G15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E223449" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="58929" e_stop="58655"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGCAGGCACAGGTGGACGCTAGAACTACAGGTTCGTTGTTGCAGCTATCCGGACATCAGTATTCATCCGGAGTTTGGTAGGTCCTCATGCTTTCGAGGATGCTACTGTTTTACATTCTAGCGTAGTTTTAGAGTTGAGCTAGCGGAGCATGTTCCACTAGCGTTTCTTTCCTGTTTTGGTTCAAACTTTGTATTGGTGCTATTTTGGCCGATATATAATTAATACTTAATGAATTATTCCTTTCAGTTGCTTATCTCTTAAATGTTAGATGGTT</genome_strand>
        <mrna_strand>GTGCAAGCACAGGTGGACGCTAAAGCTACAGGTTCGTTGTTGCAGCTATCCGGACATCAGTATTCATCCGGAGTTTGGTAGGTCCTCATGCTTTCGAGGATGCTACCGTTTTACATTCTAGCGTAGTTTTAGAGTTGAGCTAGCGGAGCATGTTCCACTAGCGTTTCTTTCCTGTTTTGGTTCAAACTTTGTATTGGCGCTATTTTGGCCGATATACAAGTAATACTTAATGAATTATTTCTTTCAGTTGCTTAAAAAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLe0039G15-FcnBD/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E329287" ref_strand="+" ref_description="SGN-E329287 [cTOD-2-K13]">
      <seq>acctagcccatctggtactaaggcggtgacacctccaccaactgaggaagtggtaagagagggtgaggatggggagaatgaacaagtgcagaatgaggaattgccaccccaacctacccaagagatgatcaatcaggttcttgcttaccttagcgggttatctgatcaaggccaagcacctccagtgttttctgcactagcacctcaggctccggaggtacaacatgcgcctactgtgactccccgcatcgatacctcattggaaataggaacgtttccccgtctgactacagggcctataatgacaaatgatcagcatgaactttttagtaagttcttgaaattgaaacctcaagtctacaagggtgttgaatctgaggatgcctacgattttctggttgactgtcatgagctactacacaagatgggtatagtagaacggtttggtgttgagtttgtgacttatcagtttcaagggaacgccaaaatgtggtggcggtcacatgttgagtgtcaaccaacagaggcaccacgtatgacttgggcatcattct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLe0039G15-FcnBD/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C06SLe0039G15.1" temp_strand="+" temp_description="C06SLe0039G15.1  AC216657.1 htgs_phase:1 submitted_to_sgn_as:C06SLe0039G15 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="68720" stop="69873"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="69020" g_stop="69573" g_length="554"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="554" r_length="554" r_score="0.917"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLe0039G15.1" gen_strand="+" ref_id="SGN-E329287" ref_strand="+">
        <total_alignment_score>0.917</total_alignment_score>
        <cumulative_length_of_scored_exons>554</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLe0039G15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E329287" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="69020" e_stop="69573"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACCTGGCCCATCTGGTACTAGGGCGGTGACTCCTCCACCGACTGAGGAAGTGTTAAGAGAGGGTGAGGAAGGGGAAAATGAGCAAGTGCAGAATGAGAAATTACCACCCCAACCTACCCCAGAGATGATTAATCAGGTTCTTGCTTATCTTAGCGGGTTATCTGATCAGGGCCAGACCCCTCCAGTGTTTTCTGCACCAGCACATCAGGTTACGGAGGTACCACATGCAGCTACTGTGGCTCCCTGCATGGATGCCTCATTGGGAATAGACACGTTTCCTCGGTTGACTACAGGGCCTATAATGACAAGTGATCAGCATGAACTTTTCAGTAAGTTCTTGAAATTGAAACCCCCAGTCTTCAAGGGTGCTGAATCTGAGGATGCCTATGATTTTCTAGTTGATTGTCATGAGCTACTACACAAGATGGGTATAGTAGAACGATTTGGCGTTGAGTTTGTGACTTATCAGTTTCAAGGGAACGCCAAAATGTGGTGGCGGTCACATGTTGAGTGTCAACCAACAGAGGCACCACCTATGACTTGGGCATCATTCT</genome_strand>
        <mrna_strand>ACCTAGCCCATCTGGTACTAAGGCGGTGACACCTCCACCAACTGAGGAAGTGGTAAGAGAGGGTGAGGATGGGGAGAATGAACAAGTGCAGAATGAGGAATTGCCACCCCAACCTACCCAAGAGATGATCAATCAGGTTCTTGCTTACCTTAGCGGGTTATCTGATCAAGGCCAAGCACCTCCAGTGTTTTCTGCACTAGCACCTCAGGCTCCGGAGGTACAACATGCGCCTACTGTGACTCCCCGCATCGATACCTCATTGGAAATAGGAACGTTTCCCCGTCTGACTACAGGGCCTATAATGACAAATGATCAGCATGAACTTTTTAGTAAGTTCTTGAAATTGAAACCTCAAGTCTACAAGGGTGTTGAATCTGAGGATGCCTACGATTTTCTGGTTGACTGTCATGAGCTACTACACAAGATGGGTATAGTAGAACGGTTTGGTGTTGAGTTTGTGACTTATCAGTTTCAAGGGAACGCCAAAATGTGGTGGCGGTCACATGTTGAGTGTCAACCAACAGAGGCACCACGTATGACTTGGGCATCATTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLe0039G15-FcnBD/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E352716" ref_strand="+" ref_description="SGN-E352716 [cTOS-11-H19]">
      <seq>gatctgtcccaggcttggctaacgtcacagttttagcattacaatccaagattgcaaaatttggagaaagccaagtcatacccagaattacatcaaaatcaaccatttctaagataaccaagtctacataagtattgctccccacaaaagtcaccagaccagacctatatactttttcaactatcacagactcacccaccggagtagaaacacgaataggcatgtcaagcaattcataatttaatttaagaccagtagcaaatgaggaagatacatatgaaaatgtggatccagggtcaaataatacaaaagccatgcaatcacaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLe0039G15-FcnBD/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C06SLe0039G15.1" temp_strand="-" temp_description="C06SLe0039G15.1  AC216657.1 htgs_phase:1 submitted_to_sgn_as:C06SLe0039G15 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="71001" stop="70071"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="70701" g_stop="70371" g_length="331"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="331" r_length="331" r_score="0.937"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLe0039G15.1" gen_strand="-" ref_id="SGN-E352716" ref_strand="+">
        <total_alignment_score>0.937</total_alignment_score>
        <cumulative_length_of_scored_exons>331</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLe0039G15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E352716" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="70701" e_stop="70371"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATCTGTCCCAGGCTTGGCTAACGTCACAGTTTTAGCATTACAATCCAAGATTGCAAAATTTGGAGAAAGCCAAGTCATACCCAGAATTACATCGAATTCAACCATTTCTAAGATAACCAAGTCTACATGAGTATTGCTCCCCACAAAAGTCACAAGACAAGACCTATACACCCTTTCAACTATCACAGACTCACCCACCGGAGTAGAAACACGAATAGACATGTCAAGCAATTCACAATGTAAGTAAAGACCATTAGCAAATCAGGAAGATACATAAGAAAATGTGGATCCAGGATCAAACAATACAGAAGCCATGCAATCACAAACCAA</genome_strand>
        <mrna_strand>GATCTGTCCCAGGCTTGGCTAACGTCACAGTTTTAGCATTACAATCCAAGATTGCAAAATTTGGAGAAAGCCAAGTCATACCCAGAATTACATCAAAATCAACCATTTCTAAGATAACCAAGTCTACATAAGTATTGCTCCCCACAAAAGTCACCAGACCAGACCTATATACTTTTTCAACTATCACAGACTCACCCACCGGAGTAGAAACACGAATAGGCATGTCAAGCAATTCATAATTTAATTTAAGACCAGTAGCAAATGAGGAAGATACATATGAAAATGTGGATCCAGGGTCAAATAATACAAAAGCCATGCAATCACAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLe0039G15-FcnBD/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E352117" ref_strand="+" ref_description="SGN-E352117 [cTOS-13-N24]">
      <seq>tttgatcctgcctccacattttcatatgtatcttcctcatttgctactgttcttaatttacatagtgaatcgcttgacatacctattcgtgttctactccggtgggtgagtctgtgattgttgaaaaggtgtataggtcttgtcttgtgacatttgtgggagcaatactcatgtagacttggttatcctataaatggttgacttcgatgtaattctgggtatgacttggctgtctccaaattttgcaatcttggattgtaatgctaaaactgtaacgttggccaagcctgagatagatgcgttagtgtgggagggtgactacacttccactccagttcgtatcatctcctttctttgtgctaagagaatggttagtaaagggtgtttagctttcttggcacacctcagggatgatactacccaagtaccttcaattgagtcagtttcgatagtccgtgagtttctggatgtgtttcctgcagaccttcctggtatgccaccggatagggatattgacttttgcattgatctggagccgggtgatcaccccatttccatacccccttatagaatggctcccgctgagttgggggagttaaaggcccaacttcaagagttgttangtaagggcttcattangccaagtgcatccccttggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLe0039G15-FcnBD/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C06SLe0039G15.1" temp_strand="+" temp_description="C06SLe0039G15.1  AC216657.1 htgs_phase:1 submitted_to_sgn_as:C06SLe0039G15 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="70101" stop="71340"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="70401" g_stop="71061" g_length="661"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="659" r_length="659" r_score="0.905"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLe0039G15.1" gen_strand="+" ref_id="SGN-E352117" ref_strand="+">
        <total_alignment_score>0.905</total_alignment_score>
        <cumulative_length_of_scored_exons>661</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLe0039G15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E352117" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="70401" e_stop="71061"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTGATCCTGGATCCACATTTTCTTATGTATCTTCCTGATTTGCTAATGGTCTTTACTTACATTGTGAATTGCTTGACATGTCTATTCGTGTTTCTACTCCGGTGGGTGAGTCTGTGATAGTTGAAAGGGTGTATAGGTCTTGTCTTGTGACTTTTGTGGGGAGCAATACTCATGTAGACTTGGTTATCTTAGAAATGGTTGAATTCGATGTAATTCTGGGTATGACTTGGCTTTCTCCAAATTTTGCAATCTTGGATTGTAATGCTAAAACTGTGACGTTAGCCAAGCCTGGGACAGATCCGTTAGTGTGGGAGGGTGACTACACTTCCAATCCGGTTTGTATCGTCTCCTTTCTTCGTGCTAAGAGAATGGTTAGTAAGGGTTGTTTAGCTTTCTTGGAACACCTCAAGGATGATACCACCCAAGTAATTTCAATTGAGTCGGTTTCGATAGTCCGCGAGTTTTTAGATGTGTTTCCTGCAGACCTTCCTGGTATGCCACCGGATAGAAATATTGACTTCTGCATCGATCTTGAACTGGGTACTCGCCCCATTTCTATACCCCCTTATAGAATGGCTCCCGCTGAGTTAAGGGAGTTAAAGGCCCAACTTCAAGAGTTGTTGAGCAAAGGCTTCATTAGATCAAGTACATCCCCTTGGG</genome_strand>
        <mrna_strand>TTTGATCCTGCCTCCACATTTTCATATGTATCTTCCTCATTTGCTACTGTTCTTAATTTACATAGTGAATCGCTTGACATACCTATTCGTGTT-CTACTCCGGTGGGTGAGTCTGTGATTGTTGAAAAGGTGTATAGGTCTTGTCTTGTGACATTTGT-GGGAGCAATACTCATGTAGACTTGGTTATCCTATAAATGGTTGACTTCGATGTAATTCTGGGTATGACTTGGCTGTCTCCAAATTTTGCAATCTTGGATTGTAATGCTAAAACTGTAACGTTGGCCAAGCCTGAGATAGATGCGTTAGTGTGGGAGGGTGACTACACTTCCACTCCAGTTCGTATCATCTCCTTTCTTTGTGCTAAGAGAATGGTTAGTAAAGGGTGTTTAGCTTTCTTGGCACACCTCAGGGATGATACTACCCAAGTACCTTCAATTGAGTCAGTTTCGATAGTCCGTGAGTTTCTGGATGTGTTTCCTGCAGACCTTCCTGGTATGCCACCGGATAGGGATATTGACTTTTGCATTGATCTGGAGCCGGGTGATCACCCCATTTCCATACCCCCTTATAGAATGGCTCCCGCTGAGTTGGGGGAGTTAAAGGCCCAACTTCAAGAGTTGTTANGTAAGGGCTTCATTANGCCAAGTGCATCCCCTTGGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLe0039G15-FcnBD/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E351414" ref_strand="+" ref_description="SGN-E351414 [cTOS-12-D7]">
      <seq>cggaaactcccatccttcttcttcacaaacaaaatcggagcaccccaaggagatgcacttggtctaatgaaacctttgctcaacaactcttgaagttgggcctttaactctcttaactctacgggagccattctataagggggtatagaaatggggcgtgtgcccggttcaagatcgatacagaagtcaatatccctatctggtggcataccaggaagatctgcagggaacacatccaaaaactcacagactataaaaaccgactcaatcgaaggtacttgggtagtgtcatccttgagatgtgccaagaaagctaaacaccctttactaaccattttcttagcacgaagaaaggagatgatgcacaccggattggaagtgtagtcaccctcccacactaacggatctgtcccaggcttggctaatgtcaccgttttagcattacaatccaagatcgcaaattgcggagaaagccaagtcatacccagaattacatcaaaatcaaccatttctaagataaccaaatctacataagtgttgctccccacaaagttcaccaaacaagacctatataccttttcaactaccacagactcacccaccggagtagaaacacgaataggcatatcaagtaattcacaatgtaaatttagaccgttag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLe0039G15-FcnBD/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C06SLe0039G15.1" temp_strand="-" temp_description="C06SLe0039G15.1  AC216657.1 htgs_phase:1 submitted_to_sgn_as:C06SLe0039G15 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="71401" stop="70144"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="71104" g_stop="70444" g_length="661"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="661" r_length="661" r_score="0.900"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLe0039G15.1" gen_strand="-" ref_id="SGN-E351414" ref_strand="+">
        <total_alignment_score>0.900</total_alignment_score>
        <cumulative_length_of_scored_exons>661</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLe0039G15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E351414" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="71104" e_stop="70444"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTAAAACTTCCATCCTTCTTCTTCACAAACAAAACAGAAGCAGCCCAAGGGGATGTACTTGATCTAATGAAGCCTTTGCTCAACAACTCTTGAAGTTGGGCCTTTAACTCCCTTAACTCAGCGGGAGCCATTCTATAAGGGGGTATAGAAATGGGGCGAGTACCCAGTTCAAGATCGATGCAGAAGTCAATATTTCTATCCGGTGGCATACCAGGAAGGTCTGCAGGAAACACATCTAAAAACTCGCGGACTATCGAAACCGACTCAATTGAAATTACTTGGGTGGTATCATCCTTGAGGTGTTCCAAGAAAGCTAAACAACCCTTACTAACCATTCTCTTAGCACGAAGAAAGGAGACGATACAAACCGGATTGGAAGTGTAGTCACCCTCCCACACTAACGGATCTGTCCCAGGCTTGGCTAACGTCACAGTTTTAGCATTACAATCCAAGATTGCAAAATTTGGAGAAAGCCAAGTCATACCCAGAATTACATCGAATTCAACCATTTCTAAGATAACCAAGTCTACATGAGTATTGCTCCCCACAAAAGTCACAAGACAAGACCTATACACCCTTTCAACTATCACAGACTCACCCACCGGAGTAGAAACACGAATAGACATGTCAAGCAATTCACAATGTAAGTAAAGACCATTAG</genome_strand>
        <mrna_strand>CGGAAACTCCCATCCTTCTTCTTCACAAACAAAATCGGAGCACCCCAAGGAGATGCACTTGGTCTAATGAAACCTTTGCTCAACAACTCTTGAAGTTGGGCCTTTAACTCTCTTAACTCTACGGGAGCCATTCTATAAGGGGGTATAGAAATGGGGCGTGTGCCCGGTTCAAGATCGATACAGAAGTCAATATCCCTATCTGGTGGCATACCAGGAAGATCTGCAGGGAACACATCCAAAAACTCACAGACTATAAAAACCGACTCAATCGAAGGTACTTGGGTAGTGTCATCCTTGAGATGTGCCAAGAAAGCTAAACACCCTTTACTAACCATTTTCTTAGCACGAAGAAAGGAGATGATGCACACCGGATTGGAAGTGTAGTCACCCTCCCACACTAACGGATCTGTCCCAGGCTTGGCTAATGTCACCGTTTTAGCATTACAATCCAAGATCGCAAATTGCGGAGAAAGCCAAGTCATACCCAGAATTACATCAAAATCAACCATTTCTAAGATAACCAAATCTACATAAGTGTTGCTCCCCACAAAGTTCACCAAACAAGACCTATATACCTTTTCAACTACCACAGACTCACCCACCGGAGTAGAAACACGAATAGGCATATCAAGTAATTCACAATGTAAATTTAGACCGTTAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLe0039G15-FcnBD/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E368762" ref_strand="+" ref_description="SGN-E368762 [TUS-22-P2]">
      <seq>gtctcacccaattcttcactgtctcaatcttacaaggatccaccatcactccatccttagaaaccacgtgccccaagaaggacactgcatctatccaaaactcacacttagagaacttggcataaagctttttctccctcaacatttctaatacaattctcaaatgctcctcatgttccttcttactattagagtatatcagtatatcatcaataaacatgatgacaaagagatccaaatatggcttaaaatcccgttcatcaagctcatgaacgcagcaggggcattcgtaagaccaaaagacatcactacaaattcgtaatgcccatacctggttctaaaagcagtctttggcacatccgttgcccgtattttcaattgatgataaccggatctcaagtcaatcttagagaagacacaagcaccttgtaactgatcgaacaagtcatcaatgcgaggaagtggatacttgttcttaatagttaccttgttcaactgccggtagtctatgcacatccgaaaactcccatccttcttcttcacaaaccaaaccggagcaccccaaggagatgcacttggtctaatgaagactttgctcaaaaactcttgaagttgggcctttaactctcttaactccgcgggagccattctataagggggtatagaaatggggcgagtg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLe0039G15-FcnBD/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C06SLe0039G15.1" temp_strand="-" temp_description="C06SLe0039G15.1  AC216657.1 htgs_phase:1 submitted_to_sgn_as:C06SLe0039G15 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="71922" stop="70644"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="71622" g_stop="70943" g_length="680"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="679" r_length="679" r_score="0.901"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLe0039G15.1" gen_strand="-" ref_id="SGN-E368762" ref_strand="+">
        <total_alignment_score>0.901</total_alignment_score>
        <cumulative_length_of_scored_exons>680</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLe0039G15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E368762" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="71622" e_stop="70943"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCTTACCCAATTCTTCACTGCTTCGATCTTAGAAGGATCCACCATCACTCCATCCTTAGAAACTACGTGCCCCAAGAAGGACACTGAATCTAGCCAAAACTCACACTTAGAGAATTTGGCATAAAGCTTTCTCTCCCTCAATAATTCCAATACCATTCTCAAGTGCTCCTCATGTTCTTTCTTGCTCTTTGAGTATACCAGTATATCATCAATGAACACGATGACACAGAGATCCAAATAGGGCTTAAAAATCCCGTTCATTAAGCTCATGAACGCAGTAGGGGCATTCGTAAGCCCAAAAGACATTACTAAGAACTCATAATGTCCATATCTGGTCCGAAAAGCAGTTTTGGGCACATCCGTTGCCCGTATTTTCAGTTGATGATAACCAGACCTCAAATCGATTTTTGAGAAGGTACAAGCACCTTGTAACTGATCGAACAAATCATCAATGCGAGGAAGAGGATACTTGTTCTTAATAGTTACCTTGTTCAATTGCCTGTAATCTATGCACATCCTAAAACTTCCATCCTTCTTCTTCACAAACAAAACAGAAGCAGCCCAAGGGGATGTACTTGATCTAATGAAGCCTTTGCTCAACAACTCTTGAAGTTGGGCCTTTAACTCCCTTAACTCAGCGGGAGCCATTCTATAAGGGGGTATAGAAATGGGGCGAGTA</genome_strand>
        <mrna_strand>GTCTCACCCAATTCTTCACTGTCTCAATCTTACAAGGATCCACCATCACTCCATCCTTAGAAACCACGTGCCCCAAGAAGGACACTGCATCTATCCAAAACTCACACTTAGAGAACTTGGCATAAAGCTTTTTCTCCCTCAACATTTCTAATACAATTCTCAAATGCTCCTCATGTTCCTTCTTACTATTAGAGTATATCAGTATATCATCAATAAACATGATGACAAAGAGATCCAAATATGGCTT-AAAATCCCGTTCATCAAGCTCATGAACGCAGCAGGGGCATTCGTAAGACCAAAAGACATCACTACAAATTCGTAATGCCCATACCTGGTTCTAAAAGCAGTCTTTGGCACATCCGTTGCCCGTATTTTCAATTGATGATAACCGGATCTCAAGTCAATCTTAGAGAAGACACAAGCACCTTGTAACTGATCGAACAAGTCATCAATGCGAGGAAGTGGATACTTGTTCTTAATAGTTACCTTGTTCAACTGCCGGTAGTCTATGCACATCCGAAAACTCCCATCCTTCTTCTTCACAAACCAAACCGGAGCACCCCAAGGAGATGCACTTGGTCTAATGAAGACTTTGCTCAAAAACTCTTGAAGTTGGGCCTTTAACTCTCTTAACTCCGCGGGAGCCATTCTATAAGGGGGTATAGAAATGGGGCGAGTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLe0039G15-FcnBD/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E223449" ref_strand="+" ref_description="SGN-E223449 [cLEL-14-I9](-)">
      <seq>tcaagggaagataggtgcaagcacaggtggacgctaaagctacaggttcgttgttgcagctatccggacatcagtattcatccggagtttggtaggtcctcatgctttcgaggatgctaccgttttacattctagcgtagttttagagttgagctagcggagcatgttccactagcgtttctttcctgttttggttcaaactttgtattggcgctattttggccgatatacaagtaatacttaatgaattatttctttcagttgcttaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLe0039G15-FcnBD/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C06SLe0039G15.1" temp_strand="-" temp_description="C06SLe0039G15.1  AC216657.1 htgs_phase:1 submitted_to_sgn_as:C06SLe0039G15 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="98284" stop="23281"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="97981" g_stop="97707" g_length="275"/>
          <reference_exon_boundary r_type="cDNA" r_start="15" r_stop="289" r_length="275" r_score="0.913"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLe0039G15.1" gen_strand="-" ref_id="SGN-E223449" ref_strand="+">
        <total_alignment_score>0.913</total_alignment_score>
        <cumulative_length_of_scored_exons>275</cumulative_length_of_scored_exons>
        <coverage percentage="0.952" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLe0039G15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E223449" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="97981" e_stop="97707"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGCAGGCACAGGTGGACGCTAGAACTACAGGTTCGTTGTTGCAGCTATCCGGACATCAGTATTCATCTGGAGTTTGGTAGGTCCTCATGCTTTCGAGGATGCTACTGTTTTACATTCTAGCGTAGTTTTAGAGTTGAGCTAGCGGAGCATGTTCCACTAGCGTTTCTTTCCTGTTTTGGTTCAAACTTTGTATTGGTGCTATTTTGGCCGATATACAATTAATACTTAATGAATTATTCCTTTCAGTTGCTTATCTCTTAAATGTTAGATGGTT</genome_strand>
        <mrna_strand>GTGCAAGCACAGGTGGACGCTAAAGCTACAGGTTCGTTGTTGCAGCTATCCGGACATCAGTATTCATCCGGAGTTTGGTAGGTCCTCATGCTTTCGAGGATGCTACCGTTTTACATTCTAGCGTAGTTTTAGAGTTGAGCTAGCGGAGCATGTTCCACTAGCGTTTCTTTCCTGTTTTGGTTCAAACTTTGTATTGGCGCTATTTTGGCCGATATACAAGTAATACTTAATGAATTATTTCTTTCAGTTGCTTAAAAAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>34</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="+" PGL_start="15898" PGL_stop="22380"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="15898" e_stop="16294"/>
            <exon e_start="18370" e_stop="18466"/>
            <exon e_start="18591" e_stop="18682"/>
            <exon e_start="18773" e_stop="18904"/>
            <exon e_start="19183" e_stop="19368"/>
            <exon e_start="19456" e_stop="19619"/>
            <exon e_start="19716" e_stop="19794"/>
            <exon e_start="20647" e_stop="20775"/>
            <exon e_start="20911" e_stop="21038"/>
            <exon e_start="21119" e_stop="21486"/>
            <exon e_start="21724" e_stop="22028"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.971" e_score="0.940"/>
          <exon-intron don_prob="0.851" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.967" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.958" e_score="1.000"/>
          <exon-intron don_prob="0.914" acc_prob="0.500" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.941" e_score="1.000"/>
          <exon-intron don_prob="0.969" acc_prob="0.976" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.763" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.998" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.940">
            <gDNA_exon_boundary e_start="15898" e_stop="16294" e_length="397"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.971">
            <gDNA_intron_boundary i_start="16295" i_stop="18369" i_length="2075"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="18370" e_stop="18466" e_length="97"/>
          </exon>
          <intron i_serial="2" don_prob="0.851" acc_prob="0.998">
            <gDNA_intron_boundary i_start="18467" i_stop="18590" i_length="124"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="18591" e_stop="18682" e_length="92"/>
          </exon>
          <intron i_serial="3" don_prob="1.000" acc_prob="0.967">
            <gDNA_intron_boundary i_start="18683" i_stop="18772" i_length="90"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="18773" e_stop="18904" e_length="132"/>
          </exon>
          <intron i_serial="4" don_prob="0.995" acc_prob="0.999">
            <gDNA_intron_boundary i_start="18905" i_stop="19182" i_length="278"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="19183" e_stop="19368" e_length="186"/>
          </exon>
          <intron i_serial="5" don_prob="0.996" acc_prob="0.958">
            <gDNA_intron_boundary i_start="19369" i_stop="19455" i_length="87"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="19456" e_stop="19619" e_length="164"/>
          </exon>
          <intron i_serial="6" don_prob="0.914" acc_prob="0.500">
            <gDNA_intron_boundary i_start="19620" i_stop="19715" i_length="96"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="19716" e_stop="19794" e_length="79"/>
          </exon>
          <intron i_serial="7" don_prob="1.000" acc_prob="0.941">
            <gDNA_intron_boundary i_start="19795" i_stop="20646" i_length="852"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="20647" e_stop="20775" e_length="129"/>
          </exon>
          <intron i_serial="8" don_prob="0.969" acc_prob="0.976">
            <gDNA_intron_boundary i_start="20776" i_stop="20910" i_length="135"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="20911" e_stop="21038" e_length="128"/>
          </exon>
          <intron i_serial="9" don_prob="0.994" acc_prob="0.763">
            <gDNA_intron_boundary i_start="21039" i_stop="21118" i_length="80"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="21119" e_stop="21486" e_length="368"/>
          </exon>
          <intron i_serial="10" don_prob="0.998" acc_prob="0.998">
            <gDNA_intron_boundary i_start="21487" i_stop="21723" i_length="237"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="21724" e_stop="22028" e_length="305"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15898" stop="16294"/>
              <exon start="18370" stop="18466"/>
              <exon start="18591" stop="18682"/>
              <exon start="18773" stop="18904"/>
              <exon start="19183" stop="19247"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E691913" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15954" stop="16294"/>
              <exon start="18370" stop="18466"/>
              <exon start="18591" stop="18682"/>
              <exon start="18773" stop="18904"/>
              <exon start="19183" stop="19346"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E739017" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15959" stop="16294"/>
              <exon start="18370" stop="18466"/>
              <exon start="18591" stop="18641"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E301119" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16010" stop="16294"/>
              <exon start="18370" stop="18466"/>
              <exon start="18591" stop="18682"/>
              <exon start="18773" stop="18904"/>
              <exon start="19183" stop="19368"/>
              <exon start="19456" stop="19619"/>
              <exon start="19716" stop="19794"/>
              <exon start="20647" stop="20775"/>
              <exon start="20911" stop="21038"/>
              <exon start="21119" stop="21486"/>
              <exon start="21724" stop="21991"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E745184" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16032" stop="16294"/>
              <exon start="18370" stop="18466"/>
              <exon start="18591" stop="18682"/>
              <exon start="18773" stop="18852"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E331824" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16082" stop="16294"/>
              <exon start="18370" stop="18466"/>
              <exon start="18591" stop="18682"/>
              <exon start="18773" stop="18904"/>
              <exon start="19183" stop="19368"/>
              <exon start="19456" stop="19619"/>
              <exon start="19716" stop="19794"/>
              <exon start="20647" stop="20775"/>
              <exon start="20911" stop="21038"/>
              <exon start="21119" stop="21486"/>
              <exon start="21724" stop="22028"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E747650" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18386" stop="18466"/>
              <exon start="18591" stop="18682"/>
              <exon start="18773" stop="18904"/>
              <exon start="19183" stop="19368"/>
              <exon start="19456" stop="19537"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E345253" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18418" stop="18466"/>
              <exon start="18591" stop="18682"/>
              <exon start="18773" stop="18904"/>
              <exon start="19183" stop="19349"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E245891" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18664" stop="18682"/>
              <exon start="18773" stop="18904"/>
              <exon start="19183" stop="19368"/>
              <exon start="19456" stop="19619"/>
              <exon start="19716" stop="19731"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E271316" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18789" stop="18904"/>
              <exon start="19183" stop="19368"/>
              <exon start="19456" stop="19590"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E207706" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19778" stop="19794"/>
              <exon start="20647" stop="20775"/>
              <exon start="20911" stop="21038"/>
              <exon start="21119" stop="21486"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E544736" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19779" stop="19794"/>
              <exon start="20647" stop="20775"/>
              <exon start="20911" stop="21038"/>
              <exon start="21119" stop="21417"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E306640" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20759" stop="20775"/>
              <exon start="20911" stop="21038"/>
              <exon start="21119" stop="21486"/>
              <exon start="21724" stop="22022"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E695753" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21463" stop="21486"/>
              <exon start="21724" stop="21980"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E209406" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTTTTTTTTCTTTTTAGAAACAATCCAAATTTTCCCCAAACCCTGATTCCACTCTCAATTGTCTTCTTCCTCATTTTCCTATTTAACAAAACTCAATTTCGCATTTCGAATTCCTCAAACTGAATTTTGTTCATAGAGATTATCGATTATCGAGTTGAGTTCAGAATTTCGATTCACCGGAGCTATGTCACTGAGGCCGAACTCGAGAACGGAGGCTCGCCGGAGCAGGTACAAAGTTGCCGTCGATGCGGAGGAAGGACGGAGAAGAAGGGAAGATAACATGGTTGAGATCCGGAAGAATAAAAGAGAAGAGAATTTGCTTAAGAAGCGTCGTGAAGGTTTACTACAAGCTCAGCAGTTTCCTAGCACTGCTGCTGTTTCTCACCTTGATAAGAAG : CTGGAGACTCTTCCTGAATTGATTGCTGGGGTTTGGTCTGATGACAGCAGTTTGCAACTTGAATGTACAACACAATTCCGGAAACTGCTTTCAATTG : AACGCAATCCTCCTATAGAGGAAGTGATACAGTCTGGGGTAGTTCCTCGCTTTGTTGAATTTCTTGCTCGAGATGACTATCCTCAACTGCAG : TTTGAGGCAGCGTGGGCTCTTACAAATATTGCATCTGGTACATCAGAAAACACTAAAGTTGTGATTGATTATGGTTCTGTCCCAATTTTCATCAGACTTCTAAGTTCACCAAGTGATGATGTCCGTGAACAG : GCCGTTTGGGCTTTGGGAAATATTGCTGGTGACTCGCCCAAGTATCGTGACCTTGTGCTTGGCCATGGAGCTTTAGTGGCATTGCTGGCACAATTTAATGAGCAGGCAAAGCTATCTATGTTGAGAAATGCTACCTGGACATTGTCAAACTTTTGTAGGGGAAAACCTCAGCCACTGTTCGAGCAG : ACAAAAGCGGCACTCCCCACTCTTGGTCGCCTTATCCACTCAAATGATGAAGAAGTCTTGACAGATGCATGCTGGGCTCTTTCATATCTTTCTGATGGAACTAATGACAAAATCCAGGCTGTTATTGAAGCTGGAGTGTGTTCCCGCCTTGTTGAGCTGCTACT : TCATTCTTCACCATCTGTTCTCATTCCTGCCTTGCGCACTGTTGGTAACATAGTCACAGGAGACGATATCCAAACTCAG : GTTATGATTGACCATCATGCTCTTCCCTGCCTTGTTAACCTGTTGACGCAAAATTACAAAAAAAGCATTAAAAAGGAAGCTTGTTGGACAATCTCGAACATTACAGCTGGTAATAGAAATCAAATTCAG : ATTGTGATCGAGGCTGGCATTATTGCCCCTCTTGTATATCTGCTACAAAATGCTGAATTTGAGATAAAGAAAGAGGCTGCTTGGGCAATTTCAAATGCTACGTCCGGTGGAAATCATGATCAAATCAA : GTTCTTGGTGAGCCAAGGTTGTATAAAACCATTGTGTGATCTTCTGGTATGTCCTGACCCAAGAATTGTCACTGTCTGCTTGGAAGGGCTTGAGAATATTCTGAAGATTGGGGAAGCTGATAAGGATCTAGGAAACACAGAAGGCGTGAATGTTTATGCCCAGTTAATCGACGAGGCTGAAGGTCTAGAAAAGATTGAAAACCTCCAAAGCCATGACAACACTGAAATCTATGAGAAAGCAGTGAAGATCCTCGAAACTTATTGGTTGGAGGAGGAAGATGTGCCGGTTTCATTAAATGAAGATCAATTCGAATTTGGAGGGGCCGATATATCTCTTCCATCGGGAGGATTTAACTTCAGTTGATGGG : GTTTGGCTAGCAGGTCAGTGAGTGGTTTTAAATTGGAGAAACATCCTCTTTAAACTATGTGTAGAGAGAGTTGTCATCTACTTGGGGGAGGTTTGGATTTTACATATATTTTCTTCTATTTATTGATGGAGTTGGTGTTGTATAAGTTACTTTTTCCCCTAGACTAGACATATTGGTGGTGGTGGATATATATATGTATACATGTTAATGTACAAGTCATACGTGGGCTCTCCATGACATTATTTGGTGTAAACATATACTTGTTTCCATCTTTTTGTACCCTTATATGGCTTGTTTCCATCTCT</gDNA_template>
            <first_frame> F  F  F  L  F  R  N  N  P  N  F  P  Q  T  L  I  P  L  S  I  V  F  F  L  I  F  L  F  N  K  T  Q  F  R  I  S  N  S  S  N  *  I  L  F  I  E  I  I  D  Y  R  V  E  F  R  I  S  I  H  R  S  Y  V  T  E  A  E  L  E  N  G  G  S  P  E  Q  V  Q  S  C  R  R  C  G  G  R  T  E  K  K  G  R  *  H  G  *  D  P  E  E  *  K  R  R  E  F  A  *  E  A  S  *  R  F  T  T  S  S  A  V  S  *  H  C  C  C  F  S  P  *  *  E   : A  G  D  S  S  *  I  D  C  W  G  L  V  *  *  Q  Q  F  A  T  *  M  Y  N  T  I  P  E  T  A  F  N  * :   T  Q  S  S  Y  R  G  S  D  T  V  W  G  S  S  S  L  C  *  I  S  C  S  R  *  L  S  S  T  A   : V  *  G  S  V  G  S  Y  K  Y  C  I  W  Y  I  R  K  H  *  S  C  D  *  L  W  F  C  P  N  F  H  Q  T  S  K  F  T  K  *  *  C  P  *  T   : G  R  L  G  F  G  K  Y  C  W  *  L  A  Q  V  S  *  P  C  A  W  P  W  S  F  S  G  I  A  G  T  I  *  *  A  G  K  A  I  Y  V  E  K  C  Y  L  D  I  V  K  L  L  *  G  K  T  S  A  T  V  R  A   : D  K  S  G  T  P  H  S  W  S  P  Y  P  L  K  *  *  R  S  L  D  R  C  M  L  G  S  F  I  S  F  *  W  N  *  *  Q  N  P  G  C  Y  *  S  W  S  V  F  P  P  C  *  A  A  T  :  S  F  F  T  I  C  S  H  S  C  L  A  H  C  W  *  H  S  H  R  R  R  Y  P  N  S   : G  Y  D  *  P  S  C  S  S  L  P  C  *  P  V  D  A  K  L  Q  K  K  H  *  K  G  S  L  L  D  N  L  E  H  Y  S  W  *  *  K  S  N  S   : D  C  D  R  G  W  H  Y  C  P  S  C  I  S  A  T  K  C  *  I  *  D  K  E  R  G  C  L  G  N  F  K  C  Y  V  R  W  K  S  *  S  N  Q  :  V  L  G  E  P  R  L  Y  K  T  I  V  *  S  S  G  M  S  *  P  K  N  C  H  C  L  L  G  R  A  *  E  Y  S  E  D  W  G  S  *  *  G  S  R  K  H  R  R  R  E  C  L  C  P  V  N  R  R  G  *  R  S  R  K  D  *  K  P  P  K  P  *  Q  H  *  N  L  *  E  S  S  E  D  P  R  N  L  L  V  G  G  G  R  C  A  G  F  I  K  *  R  S  I  R  I  W  R  G  R  Y  I  S  S  I  G  R  I  *  L  Q  L  M  G :   F  G  *  Q  V  S  E  W  F  *  I  G  E  T  S  S  L  N  Y  V  *  R  E  L  S  S  T  W  G  R  F  G  F  Y  I  Y  F  L  L  F  I  D  G  V  G  V  V  *  V  T  F  S  P  R  L  D  I  L  V  V  V  D  I  Y  M  Y  T  C  *  C  T  S  H  T  W  A  L  H  D  I  I  W  C  K  H  I  L  V  S  I  F  L  Y  P  Y  M  A  C  F  H  L  </first_frame>
            <second_frame>  F  F  F  F  L  E  T  I  Q  I  F  P  K  P  *  F  H  S  Q  L  S  S  S  S  F  S  Y  L  T  K  L  N  F  A  F  R  I  P  Q  T  E  F  C  S  *  R  L  S  I  I  E  L  S  S  E  F  R  F  T  G  A  M  S  L  R  P  N  S  R  T  E  A  R  R  S  R  Y  K  V  A  V  D  A  E  E  G  R  R  R  R  E  D  N  M  V  E  I  R  K  N  K  R  E  E  N  L  L  K  K  R  R  E  G  L  L  Q  A  Q  Q  F  P  S  T  A  A  V  S  H  L  D  K  K  :  L  E  T  L  P  E  L  I  A  G  V  W  S  D  D  S  S  L  Q  L  E  C  T  T  Q  F  R  K  L  L  S  I   : E  R  N  P  P  I  E  E  V  I  Q  S  G  V  V  P  R  F  V  E  F  L  A  R  D  D  Y  P  Q  L  Q  :  F  E  A  A  W  A  L  T  N  I  A  S  G  T  S  E  N  T  K  V  V  I  D  Y  G  S  V  P  I  F  I  R  L  L  S  S  P  S  D  D  V  R  E  Q  :  A  V  W  A  L  G  N  I  A  G  D  S  P  K  Y  R  D  L  V  L  G  H  G  A  L  V  A  L  L  A  Q  F  N  E  Q  A  K  L  S  M  L  R  N  A  T  W  T  L  S  N  F  C  R  G  K  P  Q  P  L  F  E  Q  :  T  K  A  A  L  P  T  L  G  R  L  I  H  S  N  D  E  E  V  L  T  D  A  C  W  A  L  S  Y  L  S  D  G  T  N  D  K  I  Q  A  V  I  E  A  G  V  C  S  R  L  V  E  L  L  L :   H  S  S  P  S  V  L  I  P  A  L  R  T  V  G  N  I  V  T  G  D  D  I  Q  T  Q  :  V  M  I  D  H  H  A  L  P  C  L  V  N  L  L  T  Q  N  Y  K  K  S  I  K  K  E  A  C  W  T  I  S  N  I  T  A  G  N  R  N  Q  I  Q  :  I  V  I  E  A  G  I  I  A  P  L  V  Y  L  L  Q  N  A  E  F  E  I  K  K  E  A  A  W  A  I  S  N  A  T  S  G  G  N  H  D  Q  I  K :   F  L  V  S  Q  G  C  I  K  P  L  C  D  L  L  V  C  P  D  P  R  I  V  T  V  C  L  E  G  L  E  N  I  L  K  I  G  E  A  D  K  D  L  G  N  T  E  G  V  N  V  Y  A  Q  L  I  D  E  A  E  G  L  E  K  I  E  N  L  Q  S  H  D  N  T  E  I  Y  E  K  A  V  K  I  L  E  T  Y  W  L  E  E  E  D  V  P  V  S  L  N  E  D  Q  F  E  F  G  G  A  D  I  S  L  P  S  G  G  F  N  F  S  *  W   : G  L  A  S  R  S  V  S  G  F  K  L  E  K  H  P  L  *  T  M  C  R  E  S  C  H  L  L  G  G  G  L  D  F  T  Y  I  F  F  Y  L  L  M  E  L  V  L  Y  K  L  L  F  P  L  D  *  T  Y  W  W  W  W  I  Y  I  C  I  H  V  N  V  Q  V  I  R  G  L  S  M  T  L  F  G  V  N  I  Y  L  F  P  S  F  C  T  L  I  W  L  V  S  I  S </second_frame>
            <third_frame>   F  F  S  F  *  K  Q  S  K  F  S  P  N  P  D  S  T  L  N  C  L  L  P  H  F  P  I  *  Q  N  S  I  S  H  F  E  F  L  K  L  N  F  V  H  R  D  Y  R  L  S  S  *  V  Q  N  F  D  S  P  E  L  C  H  *  G  R  T  R  E  R  R  L  A  G  A  G  T  K  L  P  S  M  R  R  K  D  G  E  E  G  K  I  T  W  L  R  S  G  R  I  K  E  K  R  I  C  L  R  S  V  V  K  V  Y  Y  K  L  S  S  F  L  A  L  L  L  F  L  T  L  I  R  S :   W  R  L  F  L  N  *  L  L  G  F  G  L  M  T  A  V  C  N  L  N  V  Q  H  N  S  G  N  C  F  Q  L  :  N  A  I  L  L  *  R  K  *  Y  S  L  G  *  F  L  A  L  L  N  F  L  L  E  M  T  I  L  N  C  S :   L  R  Q  R  G  L  L  Q  I  L  H  L  V  H  Q  K  T  L  K  L  *  L  I  M  V  L  S  Q  F  S  S  D  F  *  V  H  Q  V  M  M  S  V  N  R :   P  F  G  L  W  E  I  L  L  V  T  R  P  S  I  V  T  L  C  L  A  M  E  L  *  W  H  C  W  H  N  L  M  S  R  Q  S  Y  L  C  *  E  M  L  P  G  H  C  Q  T  F  V  G  E  N  L  S  H  C  S  S  R :   Q  K  R  H  S  P  L  L  V  A  L  S  T  Q  M  M  K  K  S  *  Q  M  H  A  G  L  F  H  I  F  L  M  E  L  M  T  K  S  R  L  L  L  K  L  E  C  V  P  A  L  L  S  C  Y   : F  I  L  H  H  L  F  S  F  L  P  C  A  L  L  V  T  *  S  Q  E  T  I  S  K  L  R :   L  *  L  T  I  M  L  F  P  A  L  L  T  C  *  R  K  I  T  K  K  A  L  K  R  K  L  V  G  Q  S  R  T  L  Q  L  V  I  E  I  K  F  R :   L  *  S  R  L  A  L  L  P  L  L  Y  I  C  Y  K  M  L  N  L  R  *  R  K  R  L  L  G  Q  F  Q  M  L  R  P  V  E  I  M  I  K  S   : S  S  W  *  A  K  V  V  *  N  H  C  V  I  F  W  Y  V  L  T  Q  E  L  S  L  S  A  W  K  G  L  R  I  F  *  R  L  G  K  L  I  R  I  *  E  T  Q  K  A  *  M  F  M  P  S  *  S  T  R  L  K  V  *  K  R  L  K  T  S  K  A  M  T  T  L  K  S  M  R  K  Q  *  R  S  S  K  L  I  G  W  R  R  K  M  C  R  F  H  *  M  K  I  N  S  N  L  E  G  P  I  Y  L  F  H  R  E  D  L  T  S  V  D  G  :  V  W  L  A  G  Q  *  V  V  L  N  W  R  N  I  L  F  K  L  C  V  E  R  V  V  I  Y  L  G  E  V  W  I  L  H  I  F  S  S  I  Y  *  W  S  W  C  C  I  S  Y  F  F  P  *  T  R  H  I  G  G  G  G  Y  I  Y  V  Y  M  L  M  Y  K  S  Y  V  G  S  P  *  H  Y  L  V  *  T  Y  T  C  F  H  L  F  V  P  L  Y  G  L  F  P  S   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06SLe0039G15.1" strand="+"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="16034" stop="16294"/>
                    <exon start="18370" stop="18466"/>
                    <exon start="18591" stop="18682"/>
                    <exon start="18773" stop="18904"/>
                    <exon start="19183" stop="19368"/>
                    <exon start="19456" stop="19619"/>
                    <exon start="19716" stop="19794"/>
                    <exon start="20647" stop="20775"/>
                    <exon start="20911" stop="21038"/>
                    <exon start="21119" stop="21482"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1629</number_coding_nucleotides>
                  <number_encoded_amino_acids>543</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RLSIIELSSEFRFTGAMSLRPNSRTEARRSRYKVAVDAEEGRRRREDNMVEIRKNKREENLLKKRREGLLQAQQFPSTAAVSHLDKKLETLPELIAGVWSDDSSLQLECTTQFRKLLSIERNPPIEEVIQSGVVPRFVEFLARDDYPQLQFEAAWALTNIASGTSENTKVVIDYGSVPIFIRLLSSPSDDVREQAVWALGNIAGDSPKYRDLVLGHGALVALLAQFNEQAKLSMLRNATWTLSNFCRGKPQPLFEQTKAALPTLGRLIHSNDEEVLTDACWALSYLSDGTNDKIQAVIEAGVCSRLVELLLHSSPSVLIPALRTVGNIVTGDDIQTQVMIDHHALPCLVNLLTQNYKKSIKKEACWTISNITAGNRNQIQIVIEAGIIAPLVYLLQNAEFEIKKEAAWAISNATSGGNHDQIKFLVSQGCIKPLCDLLVCPDPRIVTVCLEGLENILKIGEADKDLGNTEGVNVYAQLIDEAEGLEKIENLQSHDNTEIYEKAVKILETYWLEEEDVPVSLNEDQFEFGGADISLPSGGFNFS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="19778" e_stop="19794"/>
            <exon e_start="20647" e_stop="20775"/>
            <exon e_start="20911" e_stop="21038"/>
            <exon e_start="21119" e_stop="21486"/>
            <exon e_start="22176" e_stop="22380"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.941" e_score="1.000"/>
          <exon-intron don_prob="0.969" acc_prob="0.976" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.763" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.996" e_score="0.992"/>
          <exon-only e_score="0.883"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="19778" e_stop="19794" e_length="17"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.941">
            <gDNA_intron_boundary i_start="19795" i_stop="20646" i_length="852"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="20647" e_stop="20775" e_length="129"/>
          </exon>
          <intron i_serial="2" don_prob="0.969" acc_prob="0.976">
            <gDNA_intron_boundary i_start="20776" i_stop="20910" i_length="135"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="20911" e_stop="21038" e_length="128"/>
          </exon>
          <intron i_serial="3" don_prob="0.994" acc_prob="0.763">
            <gDNA_intron_boundary i_start="21039" i_stop="21118" i_length="80"/>
          </intron>
          <exon e_serial="4" e_score="0.992">
            <gDNA_exon_boundary e_start="21119" e_stop="21486" e_length="368"/>
          </exon>
          <intron i_serial="4" don_prob="0.998" acc_prob="0.996">
            <gDNA_intron_boundary i_start="21487" i_stop="22175" i_length="689"/>
          </intron>
          <exon e_serial="5" e_score="0.883">
            <gDNA_exon_boundary e_start="22176" e_stop="22380" e_length="205"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19778" stop="19794"/>
              <exon start="20647" stop="20775"/>
              <exon start="20911" stop="21038"/>
              <exon start="21119" stop="21486"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E544736" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19779" stop="19794"/>
              <exon start="20647" stop="20775"/>
              <exon start="20911" stop="21038"/>
              <exon start="21119" stop="21417"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E306640" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20650" stop="20775"/>
              <exon start="20911" stop="21038"/>
              <exon start="21119" stop="21486"/>
              <exon start="22176" stop="22380"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E695080" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ACGATATCCAAACTCAG : GTTATGATTGACCATCATGCTCTTCCCTGCCTTGTTAACCTGTTGACGCAAAATTACAAAAAAAGCATTAAAAAGGAAGCTTGTTGGACAATCTCGAACATTACAGCTGGTAATAGAAATCAAATTCAG : ATTGTGATCGAGGCTGGCATTATTGCCCCTCTTGTATATCTGCTACAAAATGCTGAATTTGAGATAAAGAAAGAGGCTGCTTGGGCAATTTCAAATGCTACGTCCGGTGGAAATCATGATCAAATCAA : GTTCTTGGTGAGCCAAGGTTGTATAAAACCATTGTGTGATCTTCTGGTATGTCCTGACCCAAGAATTGTCACTGTCTGCTTGGAAGGGCTTGAGAATATTCTGAAGATTGGGGAAGCTGATAAGGATCTAGGAAACACAGAAGGCGTGAATGTTTATGCCCAGTTAATCGACGAGGCTGAAGGTCTAGAAAAGATTGAAAACCTCCAAAGCCATGACAACACTGAAATCTATGAGAAAGCAGTGAAGATCCTCGAAACTTATTGGTTGGAGGAGGAAGATGTGCCGGTTTCATTAAATGAAGATCAATTCGAATTTGGAGGGGCCGATATATCTCTTCCATCGGGAGGATTTAACTTCAGTTGATGGG : GGTTTTGAGGAGATAAGTACAAAAACGACGGCTTTAGAGTTTCTTGGTCTTCTTACCACTTAGCTTGATTGATACAATGAGTGCCCAAGTGGTCCTCAAGCCAACCCAACTCCACATTATAAAAAAGAACAAACAATATGCTTAACAAAGTGTACATTAATATTAATGAAAAATGAGTTTTGAGTTTTACGTTCTAATATGGCAA</gDNA_template>
            <first_frame> T  I  S  K  L  R :   L  *  L  T  I  M  L  F  P  A  L  L  T  C  *  R  K  I  T  K  K  A  L  K  R  K  L  V  G  Q  S  R  T  L  Q  L  V  I  E  I  K  F  R :   L  *  S  R  L  A  L  L  P  L  L  Y  I  C  Y  K  M  L  N  L  R  *  R  K  R  L  L  G  Q  F  Q  M  L  R  P  V  E  I  M  I  K  S   : S  S  W  *  A  K  V  V  *  N  H  C  V  I  F  W  Y  V  L  T  Q  E  L  S  L  S  A  W  K  G  L  R  I  F  *  R  L  G  K  L  I  R  I  *  E  T  Q  K  A  *  M  F  M  P  S  *  S  T  R  L  K  V  *  K  R  L  K  T  S  K  A  M  T  T  L  K  S  M  R  K  Q  *  R  S  S  K  L  I  G  W  R  R  K  M  C  R  F  H  *  M  K  I  N  S  N  L  E  G  P  I  Y  L  F  H  R  E  D  L  T  S  V  D  G  :  G  F  E  E  I  S  T  K  T  T  A  L  E  F  L  G  L  L  T  T  *  L  D  *  Y  N  E  C  P  S  G  P  Q  A  N  P  T  P  H  Y  K  K  E  Q  T  I  C  L  T  K  C  T  L  I  L  M  K  N  E  F  *  V  L  R  S  N  M  A  </first_frame>
            <second_frame>  R  Y  P  N  S   : G  Y  D  *  P  S  C  S  S  L  P  C  *  P  V  D  A  K  L  Q  K  K  H  *  K  G  S  L  L  D  N  L  E  H  Y  S  W  *  *  K  S  N  S   : D  C  D  R  G  W  H  Y  C  P  S  C  I  S  A  T  K  C  *  I  *  D  K  E  R  G  C  L  G  N  F  K  C  Y  V  R  W  K  S  *  S  N  Q  :  V  L  G  E  P  R  L  Y  K  T  I  V  *  S  S  G  M  S  *  P  K  N  C  H  C  L  L  G  R  A  *  E  Y  S  E  D  W  G  S  *  *  G  S  R  K  H  R  R  R  E  C  L  C  P  V  N  R  R  G  *  R  S  R  K  D  *  K  P  P  K  P  *  Q  H  *  N  L  *  E  S  S  E  D  P  R  N  L  L  V  G  G  G  R  C  A  G  F  I  K  *  R  S  I  R  I  W  R  G  R  Y  I  S  S  I  G  R  I  *  L  Q  L  M  G :   V  L  R  R  *  V  Q  K  R  R  L  *  S  F  L  V  F  L  P  L  S  L  I  D  T  M  S  A  Q  V  V  L  K  P  T  Q  L  H  I  I  K  K  N  K  Q  Y  A  *  Q  S  V  H  *  Y  *  *  K  M  S  F  E  F  Y  V  L  I  W  Q </second_frame>
            <third_frame>   D  I  Q  T  Q  :  V  M  I  D  H  H  A  L  P  C  L  V  N  L  L  T  Q  N  Y  K  K  S  I  K  K  E  A  C  W  T  I  S  N  I  T  A  G  N  R  N  Q  I  Q  :  I  V  I  E  A  G  I  I  A  P  L  V  Y  L  L  Q  N  A  E  F  E  I  K  K  E  A  A  W  A  I  S  N  A  T  S  G  G  N  H  D  Q  I  K :   F  L  V  S  Q  G  C  I  K  P  L  C  D  L  L  V  C  P  D  P  R  I  V  T  V  C  L  E  G  L  E  N  I  L  K  I  G  E  A  D  K  D  L  G  N  T  E  G  V  N  V  Y  A  Q  L  I  D  E  A  E  G  L  E  K  I  E  N  L  Q  S  H  D  N  T  E  I  Y  E  K  A  V  K  I  L  E  T  Y  W  L  E  E  E  D  V  P  V  S  L  N  E  D  Q  F  E  F  G  G  A  D  I  S  L  P  S  G  G  F  N  F  S  *  W   : G  F  *  G  D  K  Y  K  N  D  G  F  R  V  S  W  S  S  Y  H  L  A  *  L  I  Q  *  V  P  K  W  S  S  S  Q  P  N  S  T  L  *  K  R  T  N  N  M  L  N  K  V  Y  I  N  I  N  E  K  *  V  L  S  F  T  F  *  Y  G   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06SLe0039G15.1" strand="+"/>
                <serials PGL_serial="1" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="19780" stop="19794"/>
                    <exon start="20647" stop="20775"/>
                    <exon start="20911" stop="21038"/>
                    <exon start="21119" stop="21482"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>633</number_coding_nucleotides>
                  <number_encoded_amino_acids>211</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DIQTQVMIDHHALPCLVNLLTQNYKKSIKKEACWTISNITAGNRNQIQIVIEAGIIAPLVYLLQNAEFEIKKEAAWAISNATSGGNHDQIKFLVSQGCIKPLCDLLVCPDPRIVTVCLEGLENILKIGEADKDLGNTEGVNVYAQLIDEAEGLEKIENLQSHDNTEIYEKAVKILETYWLEEEDVPVSLNEDQFEFGGADISLPSGGFNFS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="15959" e_stop="16294"/>
            <exon e_start="18370" e_stop="18466"/>
            <exon e_start="18591" e_stop="18904"/>
            <exon e_start="19183" e_stop="19368"/>
            <exon e_start="19456" e_stop="19590"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.971" e_score="0.997"/>
          <exon-intron don_prob="0.851" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.999" e_score="0.984"/>
          <exon-intron don_prob="0.996" acc_prob="0.958" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.997">
            <gDNA_exon_boundary e_start="15959" e_stop="16294" e_length="336"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.971">
            <gDNA_intron_boundary i_start="16295" i_stop="18369" i_length="2075"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="18370" e_stop="18466" e_length="97"/>
          </exon>
          <intron i_serial="2" don_prob="0.851" acc_prob="0.998">
            <gDNA_intron_boundary i_start="18467" i_stop="18590" i_length="124"/>
          </intron>
          <exon e_serial="3" e_score="0.984">
            <gDNA_exon_boundary e_start="18591" e_stop="18904" e_length="314"/>
          </exon>
          <intron i_serial="3" don_prob="0.995" acc_prob="0.999">
            <gDNA_intron_boundary i_start="18905" i_stop="19182" i_length="278"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="19183" e_stop="19368" e_length="186"/>
          </exon>
          <intron i_serial="4" don_prob="0.996" acc_prob="0.958">
            <gDNA_intron_boundary i_start="19369" i_stop="19455" i_length="87"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="19456" e_stop="19590" e_length="135"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15959" stop="16294"/>
              <exon start="18370" stop="18466"/>
              <exon start="18591" stop="18641"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E301119" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16039" stop="16294"/>
              <exon start="18370" stop="18466"/>
              <exon start="18591" stop="18904"/>
              <exon start="19183" stop="19335"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E691240" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18789" stop="18904"/>
              <exon start="19183" stop="19368"/>
              <exon start="19456" stop="19590"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E207706" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="3" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TCTTCTTCCTCATTTTCCTATTTAACAAAACTCAATTTCGCATTTCGAATTCCTCAAACTGAATTTTGTTCATAGAGATTATCGATTATCGAGTTGAGTTCAGAATTTCGATTCACCGGAGCTATGTCACTGAGGCCGAACTCGAGAACGGAGGCTCGCCGGAGCAGGTACAAAGTTGCCGTCGATGCGGAGGAAGGACGGAGAAGAAGGGAAGATAACATGGTTGAGATCCGGAAGAATAAAAGAGAAGAGAATTTGCTTAAGAAGCGTCGTGAAGGTTTACTACAAGCTCAGCAGTTTCCTAGCACTGCTGCTGTTTCTCACCTTGATAAGAAG : CTGGAGACTCTTCCTGAATTGATTGCTGGGGTTTGGTCTGATGACAGCAGTTTGCAACTTGAATGTACAACACAATTCCGGAAACTGCTTTCAATTG : AACGCAATCCTCCTATAGAGGAAGTGATACAGTCTGGGGTAGTTCCTCGCTTTGTTGAATTTCTTGCTCGAGATGACTATCCTCAACTGCAGGTTTTTTTACAAAATCTATTATTTTTGTTTTTTGTTTTGCAGTTCCATCTTTATTTCTAATGTTTACATAATTGGCATTCTATAATCTAGTTTGAGGCAGCGTGGGCTCTTACAAATATTGCATCTGGTACATCAGAAAACACTAAAGTTGTGATTGATTATGGTTCTGTCCCAATTTTCATCAGACTTCTAAGTTCACCAAGTGATGATGTCCGTGAACAG : GCCGTTTGGGCTTTGGGAAATATTGCTGGTGACTCGCCCAAGTATCGTGACCTTGTGCTTGGCCATGGAGCTTTAGTGGCATTGCTGGCACAATTTAATGAGCAGGCAAAGCTATCTATGTTGAGAAATGCTACCTGGACATTGTCAAACTTTTGTAGGGGAAAACCTCAGCCACTGTTCGAGCAG : ACAAAAGCGGCACTCCCCACTCTTGGTCGCCTTATCCACTCAAATGATGAAGAAGTCTTGACAGATGCATGCTGGGCTCTTTCATATCTTTCTGATGGAACTAATGACAAAATCCAGGCTGTTATTGAAGCTGGA</gDNA_template>
            <first_frame> S  S  S  S  F  S  Y  L  T  K  L  N  F  A  F  R  I  P  Q  T  E  F  C  S  *  R  L  S  I  I  E  L  S  S  E  F  R  F  T  G  A  M  S  L  R  P  N  S  R  T  E  A  R  R  S  R  Y  K  V  A  V  D  A  E  E  G  R  R  R  R  E  D  N  M  V  E  I  R  K  N  K  R  E  E  N  L  L  K  K  R  R  E  G  L  L  Q  A  Q  Q  F  P  S  T  A  A  V  S  H  L  D  K  K  :  L  E  T  L  P  E  L  I  A  G  V  W  S  D  D  S  S  L  Q  L  E  C  T  T  Q  F  R  K  L  L  S  I   : E  R  N  P  P  I  E  E  V  I  Q  S  G  V  V  P  R  F  V  E  F  L  A  R  D  D  Y  P  Q  L  Q  V  F  L  Q  N  L  L  F  L  F  F  V  L  Q  F  H  L  Y  F  *  C  L  H  N  W  H  S  I  I  *  F  E  A  A  W  A  L  T  N  I  A  S  G  T  S  E  N  T  K  V  V  I  D  Y  G  S  V  P  I  F  I  R  L  L  S  S  P  S  D  D  V  R  E  Q  :  A  V  W  A  L  G  N  I  A  G  D  S  P  K  Y  R  D  L  V  L  G  H  G  A  L  V  A  L  L  A  Q  F  N  E  Q  A  K  L  S  M  L  R  N  A  T  W  T  L  S  N  F  C  R  G  K  P  Q  P  L  F  E  Q  :  T  K  A  A  L  P  T  L  G  R  L  I  H  S  N  D  E  E  V  L  T  D  A  C  W  A  L  S  Y  L  S  D  G  T  N  D  K  I  Q  A  V  I  E  A  G </first_frame>
            <second_frame>  L  L  P  H  F  P  I  *  Q  N  S  I  S  H  F  E  F  L  K  L  N  F  V  H  R  D  Y  R  L  S  S  *  V  Q  N  F  D  S  P  E  L  C  H  *  G  R  T  R  E  R  R  L  A  G  A  G  T  K  L  P  S  M  R  R  K  D  G  E  E  G  K  I  T  W  L  R  S  G  R  I  K  E  K  R  I  C  L  R  S  V  V  K  V  Y  Y  K  L  S  S  F  L  A  L  L  L  F  L  T  L  I  R  S :   W  R  L  F  L  N  *  L  L  G  F  G  L  M  T  A  V  C  N  L  N  V  Q  H  N  S  G  N  C  F  Q  L  :  N  A  I  L  L  *  R  K  *  Y  S  L  G  *  F  L  A  L  L  N  F  L  L  E  M  T  I  L  N  C  R  F  F  Y  K  I  Y  Y  F  C  F  L  F  C  S  S  I  F  I  S  N  V  Y  I  I  G  I  L  *  S  S  L  R  Q  R  G  L  L  Q  I  L  H  L  V  H  Q  K  T  L  K  L  *  L  I  M  V  L  S  Q  F  S  S  D  F  *  V  H  Q  V  M  M  S  V  N  R :   P  F  G  L  W  E  I  L  L  V  T  R  P  S  I  V  T  L  C  L  A  M  E  L  *  W  H  C  W  H  N  L  M  S  R  Q  S  Y  L  C  *  E  M  L  P  G  H  C  Q  T  F  V  G  E  N  L  S  H  C  S  S  R :   Q  K  R  H  S  P  L  L  V  A  L  S  T  Q  M  M  K  K  S  *  Q  M  H  A  G  L  F  H  I  F  L  M  E  L  M  T  K  S  R  L  L  L  K  L   </second_frame>
            <third_frame>   F  F  L  I  F  L  F  N  K  T  Q  F  R  I  S  N  S  S  N  *  I  L  F  I  E  I  I  D  Y  R  V  E  F  R  I  S  I  H  R  S  Y  V  T  E  A  E  L  E  N  G  G  S  P  E  Q  V  Q  S  C  R  R  C  G  G  R  T  E  K  K  G  R  *  H  G  *  D  P  E  E  *  K  R  R  E  F  A  *  E  A  S  *  R  F  T  T  S  S  A  V  S  *  H  C  C  C  F  S  P  *  *  E   : A  G  D  S  S  *  I  D  C  W  G  L  V  *  *  Q  Q  F  A  T  *  M  Y  N  T  I  P  E  T  A  F  N  * :   T  Q  S  S  Y  R  G  S  D  T  V  W  G  S  S  S  L  C  *  I  S  C  S  R  *  L  S  S  T  A  G  F  F  T  K  S  I  I  F  V  F  C  F  A  V  P  S  L  F  L  M  F  T  *  L  A  F  Y  N  L  V  *  G  S  V  G  S  Y  K  Y  C  I  W  Y  I  R  K  H  *  S  C  D  *  L  W  F  C  P  N  F  H  Q  T  S  K  F  T  K  *  *  C  P  *  T   : G  R  L  G  F  G  K  Y  C  W  *  L  A  Q  V  S  *  P  C  A  W  P  W  S  F  S  G  I  A  G  T  I  *  *  A  G  K  A  I  Y  V  E  K  C  Y  L  D  I  V  K  L  L  *  G  K  T  S  A  T  V  R  A   : D  K  S  G  T  P  H  S  W  S  P  Y  P  L  K  *  *  R  S  L  D  R  C  M  L  G  S  F  I  S  F  *  W  N  *  *  Q  N  P  G  C  Y  *  S  W  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06SLe0039G15.1" strand="+"/>
                <serials PGL_serial="1" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="16034" stop="16294"/>
                    <exon start="18370" stop="18466"/>
                    <exon start="18591" stop="18742"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>507</number_coding_nucleotides>
                  <number_encoded_amino_acids>169</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RLSIIELSSEFRFTGAMSLRPNSRTEARRSRYKVAVDAEEGRRRREDNMVEIRKNKREENLLKKRREGLLQAQQFPSTAAVSHLDKKLETLPELIAGVWSDDSSLQLECTTQFRKLLSIERNPPIEEVIQSGVVPRFVEFLARDDYPQLQVFLQNLLFLFFVLQFHLYF*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06SLe0039G15.1" strand="+"/>
                <serials PGL_serial="1" AGS_serial="3" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="18773" stop="18904"/>
                    <exon start="19183" stop="19368"/>
                    <exon start="19456" stop="19590"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>453</number_coding_nucleotides>
                  <number_encoded_amino_acids>151</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FEAAWALTNIASGTSENTKVVIDYGSVPIFIRLLSSPSDDVREQAVWALGNIAGDSPKYRDLVLGHGALVALLAQFNEQAKLSMLRNATWTLSNFCRGKPQPLFEQTKAALPTLGRLIHSNDEEVLTDACWALSYLSDGTNDKIQAVIEAG</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="+" PGL_start="31142" PGL_stop="32880"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="31142" e_stop="31172"/>
            <exon e_start="32153" e_stop="32880"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.500" acc_prob="0.000" e_score="0.613"/>
          <exon-only e_score="0.993"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.613">
            <gDNA_exon_boundary e_start="31142" e_stop="31172" e_length="31"/>
          </exon>
          <intron i_serial="1" don_prob="0.500" acc_prob="0.000">
            <gDNA_intron_boundary i_start="31173" i_stop="32152" i_length="980"/>
          </intron>
          <exon e_serial="2" e_score="0.993">
            <gDNA_exon_boundary e_start="32153" e_stop="32880" e_length="728"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31142" stop="31172"/>
              <exon start="32153" stop="32880"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E687651" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TCTTTCTTTCATTTTTCCCTTTTCACGTTTG : ATACAAAATCCCTTTTTTATATCATTAACTCCAGGAACTTTTAGCACACAATTGCACCAAGAAGCCACAAATATTACACGCTTTCCTCAATTAATATGTGATCAAGACGACATTTAAACACTATTGCTATCCAAATGACTTTTCACATATTGGGATTGAGGGAGCAGCTAAAAACCAGCCATCAGATAGAACCTGAATTTTGATTTTACAGATCAGGGCATCATTGGCAAAGTATTATATAAGCACAGGATCATTTTGCAGCAAAAAATTGGCTAAGACAGCTGATGCTACCACCTTGGCAAAGTATTATATAAGCACAGGATCATTTTGCAGCAAAAAATTGGCCAAGACAGCTGATGCTACCACCTAGTGTAAGTGCAACAAATATCATCTTGAATGTTTGACCGACATTTTGCTCATTTTTCTCGTGAAAAATCAGAGGGATAACTTTACCATTGCAGGCTGTTGTTTAATAAGGGAACGATGAATAATTGTCAAGTCAGGATCATCCTTGTGCTTGTCCCAAGCGGTTTTGAACTGCGAGCCCTTGGATCTTGACAATGAGGGGAAAATATTAAGAAATTGAAGAACTCAATAATTAGAGAGAAACTACAACAAGACAAAAAAAGCCATATCACATGAAGGAAGAGAAAACAGAAGTAACAGAGCATGATATATACTGTTGGATCAAAATTATAGTCTGAAGAACAAGTTTTCTGATTTCTTCA</gDNA_template>
            <first_frame> S  F  F  H  F  S  L  F  T  F   : D  T  K  S  L  F  Y  I  I  N  S  R  N  F  *  H  T  I  A  P  R  S  H  K  Y  Y  T  L  S  S  I  N  M  *  S  R  R  H  L  N  T  I  A  I  Q  M  T  F  H  I  L  G  L  R  E  Q  L  K  T  S  H  Q  I  E  P  E  F  *  F  Y  R  S  G  H  H  W  Q  S  I  I  *  A  Q  D  H  F  A  A  K  N  W  L  R  Q  L  M  L  P  P  W  Q  S  I  I  *  A  Q  D  H  F  A  A  K  N  W  P  R  Q  L  M  L  P  P  S  V  S  A  T  N  I  I  L  N  V  *  P  T  F  C  S  F  F  S  *  K  I  R  G  I  T  L  P  L  Q  A  V  V  *  *  G  N  D  E  *  L  S  S  Q  D  H  P  C  A  C  P  K  R  F  *  T  A  S  P  W  I  L  T  M  R  G  K  Y  *  E  I  E  E  L  N  N  *  R  E  T  T  T  R  Q  K  K  P  Y  H  M  K  E  E  K  T  E  V  T  E  H  D  I  Y  C  W  I  K  I  I  V  *  R  T  S  F  L  I  S  S </first_frame>
            <second_frame>  L  S  F  I  F  P  F  S  R  L  :  I  Q  N  P  F  F  I  S  L  T  P  G  T  F  S  T  Q  L  H  Q  E  A  T  N  I  T  R  F  P  Q  L  I  C  D  Q  D  D  I  *  T  L  L  L  S  K  *  L  F  T  Y  W  D  *  G  S  S  *  K  P  A  I  R  *  N  L  N  F  D  F  T  D  Q  G  I  I  G  K  V  L  Y  K  H  R  I  I  L  Q  Q  K  I  G  *  D  S  *  C  Y  H  L  G  K  V  L  Y  K  H  R  I  I  L  Q  Q  K  I  G  Q  D  S  *  C  Y  H  L  V  *  V  Q  Q  I  S  S  *  M  F  D  R  H  F  A  H  F  S  R  E  K  S  E  G  *  L  Y  H  C  R  L  L  F  N  K  G  T  M  N  N  C  Q  V  R  I  I  L  V  L  V  P  S  G  F  E  L  R  A  L  G  S  *  Q  *  G  E  N  I  K  K  L  K  N  S  I  I  R  E  K  L  Q  Q  D  K  K  S  H  I  T  *  R  K  R  K  Q  K  *  Q  S  M  I  Y  T  V  G  S  K  L  *  S  E  E  Q  V  F  *  F  L   </second_frame>
            <third_frame>   F  L  S  F  F  P  F  H  V  * :   Y  K  I  P  F  L  Y  H  *  L  Q  E  L  L  A  H  N  C  T  K  K  P  Q  I  L  H  A  F  L  N  *  Y  V  I  K  T  T  F  K  H  Y  C  Y  P  N  D  F  S  H  I  G  I  E  G  A  A  K  N  Q  P  S  D  R  T  *  I  L  I  L  Q  I  R  A  S  L  A  K  Y  Y  I  S  T  G  S  F  C  S  K  K  L  A  K  T  A  D  A  T  T  L  A  K  Y  Y  I  S  T  G  S  F  C  S  K  K  L  A  K  T  A  D  A  T  T  *  C  K  C  N  K  Y  H  L  E  C  L  T  D  I  L  L  I  F  L  V  K  N  Q  R  D  N  F  T  I  A  G  C  C  L  I  R  E  R  *  I  I  V  K  S  G  S  S  L  C  L  S  Q  A  V  L  N  C  E  P  L  D  L  D  N  E  G  K  I  L  R  N  *  R  T  Q  *  L  E  R  N  Y  N  K  T  K  K  A  I  S  H  E  G  R  E  N  R  S  N  R  A  *  Y  I  L  L  D  Q  N  Y  S  L  K  N  K  F  S  D  F  F  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C06SLe0039G15.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="-" PGL_start="33208" PGL_stop="31250"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="33208" e_stop="33205"/>
            <exon e_start="32934" e_stop="32833"/>
            <exon e_start="32705" e_stop="32606"/>
            <exon e_start="31595" e_stop="31250"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.760" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.951" acc_prob="0.871" e_score="1.000"/>
          <exon-intron don_prob="0.765" acc_prob="0.995" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="33208" e_stop="33205" e_length="4"/>
          </exon>
          <intron i_serial="1" don_prob="0.760" acc_prob="1.000">
            <gDNA_intron_boundary i_start="33204" i_stop="32935" i_length="270"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="32934" e_stop="32833" e_length="102"/>
          </exon>
          <intron i_serial="2" don_prob="0.951" acc_prob="0.871">
            <gDNA_intron_boundary i_start="32832" i_stop="32706" i_length="127"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="32705" e_stop="32606" e_length="100"/>
          </exon>
          <intron i_serial="3" don_prob="0.765" acc_prob="0.995">
            <gDNA_intron_boundary i_start="32605" i_stop="31596" i_length="1010"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="31595" e_stop="31250" e_length="346"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33208" stop="33205"/>
              <exon start="32934" stop="32833"/>
              <exon start="32705" stop="32606"/>
              <exon start="31595" stop="31331"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E338438" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31595" stop="31250"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E233998" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31579" stop="31250"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E234253" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AAAG : GTTGGTGGATGAACTTGTTAGTCTATTCAAGGAAGCAGCGCTGAAAATTGCACGTGAAGAAATCAGAAAACTTGTTCTTCAGACTATAATTTTGATCCAACA : ATCCAAGGGCTCGCAGTTCAAAACCGCTTGGGACAAGCACAAGGATGATCCTGACTTGACAATTATTCATCGTTCCCTTATTAAACAACAGCCTGCAATG : GTTGTTCAATTAGGGAATCTTGGTGGAACTGATAAAGTTGTCGCCATATGAGGGTGAGAATGCATACAAATAGACCCTTGCAGTCTGGCTCTTTTTTCGGACTCCTCACATAGTGAGAACTTAGTGTATCGAGTTGCCATTCCTATCAATTGCTGTGATTTGTTATGCCGTGCATCAAACGAAGGGATTGAGAGTGATTGGGCTCAGCCTCAATGTAAATAGTTAGTCGCCCATAGGCATACTTTCAAGTTTAAGATATAATACTGTTACAATGCAGAATTTCGTATGGGGATGTACTTATTTTAGGGTCCGTTTGGATGGGCTTAATAAAAGCAGCTTTAAAAAA</gDNA_template>
            <first_frame> K   : G  W  W  M  N  L  L  V  Y  S  R  K  Q  R  *  K  L  H  V  K  K  S  E  N  L  F  F  R  L  *  F  *  S  N   : N  P  R  A  R  S  S  K  P  L  G  T  S  T  R  M  I  L  T  *  Q  L  F  I  V  P  L  L  N  N  S  L  Q  W :   L  F  N  *  G  I  L  V  E  L  I  K  L  S  P  Y  E  G  E  N  A  Y  K  *  T  L  A  V  W  L  F  F  R  T  P  H  I  V  R  T  *  C  I  E  L  P  F  L  S  I  A  V  I  C  Y  A  V  H  Q  T  K  G  L  R  V  I  G  L  S  L  N  V  N  S  *  S  P  I  G  I  L  S  S  L  R  Y  N  T  V  T  M  Q  N  F  V  W  G  C  T  Y  F  R  V  R  L  D  G  L  N  K  S  S  F  K  K </first_frame>
            <second_frame>  K  :  V  G  G  *  T  C  *  S  I  Q  G  S  S  A  E  N  C  T  *  R  N  Q  K  T  C  S  S  D  Y  N  F  D  P  T  :  I  Q  G  L  A  V  Q  N  R  L  G  Q  A  Q  G  *  S  *  L  D  N  Y  S  S  F  P  Y  *  T  T  A  C  N   : G  C  S  I  R  E  S  W  W  N  *  *  S  C  R  H  M  R  V  R  M  H  T  N  R  P  L  Q  S  G  S  F  F  G  L  L  T  *  *  E  L  S  V  S  S  C  H  S  Y  Q  L  L  *  F  V  M  P  C  I  K  R  R  D  *  E  *  L  G  S  A  S  M  *  I  V  S  R  P  *  A  Y  F  Q  V  *  D  I  I  L  L  Q  C  R  I  S  Y  G  D  V  L  I  L  G  S  V  W  M  G  L  I  K  A  A  L  K   </second_frame>
            <third_frame>   R :   L  V  D  E  L  V  S  L  F  K  E  A  A  L  K  I  A  R  E  E  I  R  K  L  V  L  Q  T  I  I  L  I  Q  Q :   S  K  G  S  Q  F  K  T  A  W  D  K  H  K  D  D  P  D  L  T  I  I  H  R  S  L  I  K  Q  Q  P  A  M  :  V  V  Q  L  G  N  L  G  G  T  D  K  V  V  A  I  *  G  *  E  C  I  Q  I  D  P  C  S  L  A  L  F  S  D  S  S  H  S  E  N  L  V  Y  R  V  A  I  P  I  N  C  C  D  L  L  C  R  A  S  N  E  G  I  E  S  D  W  A  Q  P  Q  C  K  *  L  V  A  H  R  H  T  F  K  F  K  I  *  Y  C  Y  N  A  E  F  R  M  G  M  Y  L  F  *  G  P  F  G  W  A  *  *  K  Q  L  *  K  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06SLe0039G15.1" strand="-"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="33206" stop="33205"/>
                    <exon start="32934" stop="32833"/>
                    <exon start="32705" stop="32606"/>
                    <exon start="31595" stop="31545"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>252</number_coding_nucleotides>
                  <number_encoded_amino_acids>84</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RLVDELVSLFKEAALKIAREEIRKLVLQTIILIQQSKGSQFKTAWDKHKDDPDLTIIHRSLIKQQPAMVVQLGNLGGTDKVVAI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="32878" e_stop="32252"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.995"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.995">
            <gDNA_exon_boundary e_start="32878" e_stop="32252" e_length="627"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32878" stop="32252"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E320785" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AAGAAATCAGAAAACTTGTTCTTCAGACTATAATTTTGATCCAACAGTATATATCATGCTCTGTTACTTCTGTTTTCTCTTCCTTCATGTGATATGGCTTTTTTTGTCTTGTTGTAGTTTCTCTCTAATTATTGAGTTCTTCAATTTCTTAATATTTTCCCCTCATTGTCAAGATCCAAGGGCTCGCAGTTCAAAACCGCTTGGGACAAGCACAAGGATGATCCTGACTTGACAATTATTCATCGTTCCCTTATTAAACAACAGCCTGCAATGGTAAAGTTATCCCTCTGATTTTTCACGAGAAAAATGAGCAAAATGTCGGTCAAACATTCAAGATGATATTTGTTGCACTTACACTAGGTGGTAGCATCAGCTGTCTTGGCCAATTTTTTGCTGCAAAATGATCCTGTGCTTATATAATACTTTGCCAAGGTGGTAGCATCAGCTGTCTTAGCCAATTTTTTGCTGCAAAATGATCCTGTGCTTATATAATACTTTGCCAATGATGCCCTGATCTGTAAAATCAAAATTCAGGTTCTATCTGATGGCTGGTTTTTAGCTGCTCCCTCAATCCCAATATGTGAAAAGTCATTTGGATAGCAATAGTGTTTAAATGTCGTCTTGATC</gDNA_template>
            <first_frame> K  K  S  E  N  L  F  F  R  L  *  F  *  S  N  S  I  Y  H  A  L  L  L  L  F  S  L  P  S  C  D  M  A  F  F  V  L  L  *  F  L  S  N  Y  *  V  L  Q  F  L  N  I  F  P  S  L  S  R  S  K  G  S  Q  F  K  T  A  W  D  K  H  K  D  D  P  D  L  T  I  I  H  R  S  L  I  K  Q  Q  P  A  M  V  K  L  S  L  *  F  F  T  R  K  M  S  K  M  S  V  K  H  S  R  *  Y  L  L  H  L  H  *  V  V  A  S  A  V  L  A  N  F  L  L  Q  N  D  P  V  L  I  *  Y  F  A  K  V  V  A  S  A  V  L  A  N  F  L  L  Q  N  D  P  V  L  I  *  Y  F  A  N  D  A  L  I  C  K  I  K  I  Q  V  L  S  D  G  W  F  L  A  A  P  S  I  P  I  C  E  K  S  F  G  *  Q  *  C  L  N  V  V  L  I </first_frame>
            <second_frame>  R  N  Q  K  T  C  S  S  D  Y  N  F  D  P  T  V  Y  I  M  L  C  Y  F  C  F  L  F  L  H  V  I  W  L  F  L  S  C  C  S  F  S  L  I  I  E  F  F  N  F  L  I  F  S  P  H  C  Q  D  P  R  A  R  S  S  K  P  L  G  T  S  T  R  M  I  L  T  *  Q  L  F  I  V  P  L  L  N  N  S  L  Q  W  *  S  Y  P  S  D  F  S  R  E  K  *  A  K  C  R  S  N  I  Q  D  D  I  C  C  T  Y  T  R  W  *  H  Q  L  S  W  P  I  F  C  C  K  M  I  L  C  L  Y  N  T  L  P  R  W  *  H  Q  L  S  *  P  I  F  C  C  K  M  I  L  C  L  Y  N  T  L  P  M  M  P  *  S  V  K  S  K  F  R  F  Y  L  M  A  G  F  *  L  L  P  Q  S  Q  Y  V  K  S  H  L  D  S  N  S  V  *  M  S  S  *   </second_frame>
            <third_frame>   E  I  R  K  L  V  L  Q  T  I  I  L  I  Q  Q  Y  I  S  C  S  V  T  S  V  F  S  S  F  M  *  Y  G  F  F  C  L  V  V  V  S  L  *  L  L  S  S  S  I  S  *  Y  F  P  L  I  V  K  I  Q  G  L  A  V  Q  N  R  L  G  Q  A  Q  G  *  S  *  L  D  N  Y  S  S  F  P  Y  *  T  T  A  C  N  G  K  V  I  P  L  I  F  H  E  K  N  E  Q  N  V  G  Q  T  F  K  M  I  F  V  A  L  T  L  G  G  S  I  S  C  L  G  Q  F  F  A  A  K  *  S  C  A  Y  I  I  L  C  Q  G  G  S  I  S  C  L  S  Q  F  F  A  A  K  *  S  C  A  Y  I  I  L  C  Q  *  C  P  D  L  *  N  Q  N  S  G  S  I  *  W  L  V  F  S  C  S  L  N  P  N  M  *  K  V  I  W  I  A  I  V  F  K  C  R  L  D  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06SLe0039G15.1" strand="-"/>
                <serials PGL_serial="3" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="32877" stop="32647"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>228</number_coding_nucleotides>
                  <number_encoded_amino_acids>76</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RNQKTCSSDYNFDPTVYIMLCYFCFLFLHVIWLFLSCCSFSLIIEFFNFLIFSPHCQDPRARSSKPLGTSTRMILT*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="-" PGL_start="35749" PGL_stop="34532"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="35749" e_stop="35477"/>
            <exon e_start="35357" e_stop="35271"/>
            <exon e_start="34617" e_stop="34532"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.705" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="35749" e_stop="35477" e_length="273"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.993">
            <gDNA_intron_boundary i_start="35476" i_stop="35358" i_length="119"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="35357" e_stop="35271" e_length="87"/>
          </exon>
          <intron i_serial="2" don_prob="0.705" acc_prob="0.999">
            <gDNA_intron_boundary i_start="35270" i_stop="34618" i_length="653"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="34617" e_stop="34532" e_length="86"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="35749" stop="35477"/>
              <exon start="35357" stop="35271"/>
              <exon start="34617" stop="34532"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E208546" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AAAGACCTATCTAAAGCTTATGCTACCATGGCTGCTGGGAATCATGACCTGATCAAATTTGGCGAGCTGGATCTTGATTTTAAGCCTCTCCCAAATGATAAAATCTTGGCCATACACTTAATCCCTCAACTCTTGCCTTTGCTAAAAGACACGATTAAAGAGAGTGCCATTGATAAATCAATTGATGGTCATGAGATATCAGCTGCAAGCGCTAGTGTTCCTGTAGCATATGCCATTATTGCTGCTTATCAGTTTAGATGGCTCATTTCTCAG : GTGGATTATCCTCACCTTGGAAAAGTGTGCTCTTGGGTGATTCCATGTGCCCTAACAGCTCTTGATCACTGGTCGTCTGAAGTAAAG : GGACAGGGCATGATTAGCTTAATATATCTGGCGAAAAATGTCAATGCGGCTGAGATTGGTTGGTATGAAGATGTAATTCTTGATGC</gDNA_template>
            <first_frame> K  D  L  S  K  A  Y  A  T  M  A  A  G  N  H  D  L  I  K  F  G  E  L  D  L  D  F  K  P  L  P  N  D  K  I  L  A  I  H  L  I  P  Q  L  L  P  L  L  K  D  T  I  K  E  S  A  I  D  K  S  I  D  G  H  E  I  S  A  A  S  A  S  V  P  V  A  Y  A  I  I  A  A  Y  Q  F  R  W  L  I  S  Q  :  V  D  Y  P  H  L  G  K  V  C  S  W  V  I  P  C  A  L  T  A  L  D  H  W  S  S  E  V  K  :  G  Q  G  M  I  S  L  I  Y  L  A  K  N  V  N  A  A  E  I  G  W  Y  E  D  V  I  L  D   </first_frame>
            <second_frame>  K  T  Y  L  K  L  M  L  P  W  L  L  G  I  M  T  *  S  N  L  A  S  W  I  L  I  L  S  L  S  Q  M  I  K  S  W  P  Y  T  *  S  L  N  S  C  L  C  *  K  T  R  L  K  R  V  P  L  I  N  Q  L  M  V  M  R  Y  Q  L  Q  A  L  V  F  L  *  H  M  P  L  L  L  L  I  S  L  D  G  S  F  L  R :   W  I  I  L  T  L  E  K  C  A  L  G  *  F  H  V  P  *  Q  L  L  I  T  G  R  L  K  *  R :   D  R  A  *  L  A  *  Y  I  W  R  K  M  S  M  R  L  R  L  V  G  M  K  M  *  F  L  M  </second_frame>
            <third_frame>   R  P  I  *  S  L  C  Y  H  G  C  W  E  S  *  P  D  Q  I  W  R  A  G  S  *  F  *  A  S  P  K  *  *  N  L  G  H  T  L  N  P  S  T  L  A  F  A  K  R  H  D  *  R  E  C  H  *  *  I  N  *  W  S  *  D  I  S  C  K  R  *  C  S  C  S  I  C  H  Y  C  C  L  S  V  *  M  A  H  F  S   : G  G  L  S  S  P  W  K  S  V  L  L  G  D  S  M  C  P  N  S  S  *  S  L  V  V  *  S  K   : G  T  G  H  D  *  L  N  I  S  G  E  K  C  Q  C  G  *  D  W  L  V  *  R  C  N  S  *  C </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06SLe0039G15.1" strand="-"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="35749" stop="35477"/>
                    <exon start="35357" stop="35271"/>
                    <exon start="34617" stop="34534"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>444</number_coding_nucleotides>
                  <number_encoded_amino_acids>148</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KDLSKAYATMAAGNHDLIKFGELDLDFKPLPNDKILAIHLIPQLLPLLKDTIKESAIDKSIDGHEISAASASVPVAYAIIAAYQFRWLISQVDYPHLGKVCSWVIPCALTALDHWSSEVKGQGMISLIYLAKNVNAAEIGWYEDVILD</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="+" PGL_start="38319" PGL_stop="38908"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="38319" e_stop="38908"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.961"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.961">
            <gDNA_exon_boundary e_start="38319" e_stop="38908" e_length="590"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="38319" stop="38908"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E368582" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="38319" stop="38869"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E243672" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AATTGCAATTTTTTTCTCTCTCGCGACTGCAATTTTTTCTCTCTCGTGATTGCAATTTTTTTTCGACGACTTCAATTTTCTCTCGCCATTGCAATTTAAAGGTTAGTGTTGAGTAAGATCTGTTAGTTTAGGTTACTTGCACTGCATTCTGCTATTTTTGTTGGTCTCCATTGCACTTAACTGATCCTTTAATGTGAGCTTGCAATTGTGGTATTGACAGTGCCCAGATCGTTACGCCTTTCTTCTTTTTGTGTGGATTTATGTTGAGATTTCGTTTGATTTATGTTTACGTTACTTGTGTGCCTTTTTGTTTGATGATTTATGTTGAGATTTCGTTTGATTCAAGTTCCTGTGAGTGTCTGGTATTCAGTTCTCTTCTCTAATAAGTATGATCTCTTGTTAGCATCTGTGTAATACAACTTTAATTCAGGTTTAATTCACTTTTTAGCATTTGTGTAATACAACTTCAATTCAGTTTTAGTTCACTTGTTAGCATCCGTGTAATACAATTTTAATTCCGATTTAATTCACTTGTTAACATCTCTGTAATACAACTTTAATTCAAGTTTAATTCACTTGTTAGCATCTGT</gDNA_template>
            <first_frame> N  C  N  F  F  L  S  R  D  C  N  F  F  S  L  V  I  A  I  F  F  R  R  L  Q  F  S  L  A  I  A  I  *  R  L  V  L  S  K  I  C  *  F  R  L  L  A  L  H  S  A  I  F  V  G  L  H  C  T  *  L  I  L  *  C  E  L  A  I  V  V  L  T  V  P  R  S  L  R  L  S  S  F  C  V  D  L  C  *  D  F  V  *  F  M  F  T  L  L  V  C  L  F  V  *  *  F  M  L  R  F  R  L  I  Q  V  P  V  S  V  W  Y  S  V  L  F  S  N  K  Y  D  L  L  L  A  S  V  *  Y  N  F  N  S  G  L  I  H  F  L  A  F  V  *  Y  N  F  N  S  V  L  V  H  L  L  A  S  V  *  Y  N  F  N  S  D  L  I  H  L  L  T  S  L  *  Y  N  F  N  S  S  L  I  H  L  L  A  S   </first_frame>
            <second_frame>  I  A  I  F  F  S  L  A  T  A  I  F  S  L  S  *  L  Q  F  F  F  D  D  F  N  F  L  S  P  L  Q  F  K  G  *  C  *  V  R  S  V  S  L  G  Y  L  H  C  I  L  L  F  L  L  V  S  I  A  L  N  *  S  F  N  V  S  L  Q  L  W  Y  *  Q  C  P  D  R  Y  A  F  L  L  F  V  W  I  Y  V  E  I  S  F  D  L  C  L  R  Y  L  C  A  F  L  F  D  D  L  C  *  D  F  V  *  F  K  F  L  *  V  S  G  I  Q  F  S  S  L  I  S  M  I  S  C  *  H  L  C  N  T  T  L  I  Q  V  *  F  T  F  *  H  L  C  N  T  T  S  I  Q  F  *  F  T  C  *  H  P  C  N  T  I  L  I  P  I  *  F  T  C  *  H  L  C  N  T  T  L  I  Q  V  *  F  T  C  *  H  L  </second_frame>
            <third_frame>   L  Q  F  F  S  L  S  R  L  Q  F  F  L  S  R  D  C  N  F  F  S  T  T  S  I  F  S  R  H  C  N  L  K  V  S  V  E  *  D  L  L  V  *  V  T  C  T  A  F  C  Y  F  C  W  S  P  L  H  L  T  D  P  L  M  *  A  C  N  C  G  I  D  S  A  Q  I  V  T  P  F  F  F  L  C  G  F  M  L  R  F  R  L  I  Y  V  Y  V  T  C  V  P  F  C  L  M  I  Y  V  E  I  S  F  D  S  S  S  C  E  C  L  V  F  S  S  L  L  *  *  V  *  S  L  V  S  I  C  V  I  Q  L  *  F  R  F  N  S  L  F  S  I  C  V  I  Q  L  Q  F  S  F  S  S  L  V  S  I  R  V  I  Q  F  *  F  R  F  N  S  L  V  N  I  S  V  I  Q  L  *  F  K  F  N  S  L  V  S  I  C </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C06SLe0039G15.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="-" PGL_start="39299" PGL_stop="38579"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="39299" e_stop="39130"/>
            <exon e_start="38904" e_stop="38579"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.098" e_score="0.935"/>
          <exon-only e_score="0.979"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.935">
            <gDNA_exon_boundary e_start="39299" e_stop="39130" e_length="170"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.098">
            <gDNA_intron_boundary i_start="39129" i_stop="38905" i_length="225"/>
          </intron>
          <exon e_serial="2" e_score="0.979">
            <gDNA_exon_boundary e_start="38904" e_stop="38579" e_length="326"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="39299" stop="39130"/>
              <exon start="38904" stop="38579"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E253404" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GTGAACTAAAACTGAATTAAAGTTGTATTACACAAATGCTAACAAGTGAATTAAACATGAATTAAATCTGTATTACACAGATGCTAACAAGTGAATTAAACTTTTTTTAAAGTTGTATTACACAGATGTTAACAAGTGAATTAAACCGGAATTAAAGTTGTATTACACGG : ATGCTAACAAGTGAATTAAACTTGAATTAAAGTTGTATTACAGAGATGTTAACAAGTGAATTAAATCGGAATTAAAATTGTATTACACGGATGCTAACAAGTGAACTAAAACTGAATTGAAGTTGTATTACACAAATGCTAAAAAGTGAATTAAACCTGAATTAAAGTTGTATTACACAGATGCTAACAAGAGATCATACTTATTAGAGAAGAGAACTGAATACCAGACACTCACAGGAACTTGAATCAAACGAAATCTCAACATAAATCATCAAACAAAAAGGCACACAAGTAACGTAAACATAAATCAAACGAAATCTCAACAT</gDNA_template>
            <first_frame> V  N  *  N  *  I  K  V  V  L  H  K  C  *  Q  V  N  *  T  *  I  K  S  V  L  H  R  C  *  Q  V  N  *  T  F  F  K  V  V  L  H  R  C  *  Q  V  N  *  T  G  I  K  V  V  L  H  G :   C  *  Q  V  N  *  T  *  I  K  V  V  L  Q  R  C  *  Q  V  N  *  I  G  I  K  I  V  L  H  G  C  *  Q  V  N  *  N  *  I  E  V  V  L  H  K  C  *  K  V  N  *  T  *  I  K  V  V  L  H  R  C  *  Q  E  I  I  L  I  R  E  E  N  *  I  P  D  T  H  R  N  L  N  Q  T  K  S  Q  H  K  S  S  N  K  K  A  H  K  *  R  K  H  K  S  N  E  I  S  T  </first_frame>
            <second_frame>  *  T  K  T  E  L  K  L  Y  Y  T  N  A  N  K  *  I  K  H  E  L  N  L  Y  Y  T  D  A  N  K  *  I  K  L  F  L  K  L  Y  Y  T  D  V  N  K  *  I  K  P  E  L  K  L  Y  Y  T   : D  A  N  K  *  I  K  L  E  L  K  L  Y  Y  R  D  V  N  K  *  I  K  S  E  L  K  L  Y  Y  T  D  A  N  K  *  T  K  T  E  L  K  L  Y  Y  T  N  A  K  K  *  I  K  P  E  L  K  L  Y  Y  T  D  A  N  K  R  S  Y  L  L  E  K  R  T  E  Y  Q  T  L  T  G  T  *  I  K  R  N  L  N  I  N  H  Q  T  K  R  H  T  S  N  V  N  I  N  Q  T  K  S  Q  H </second_frame>
            <third_frame>   E  L  K  L  N  *  S  C  I  T  Q  M  L  T  S  E  L  N  M  N  *  I  C  I  T  Q  M  L  T  S  E  L  N  F  F  *  S  C  I  T  Q  M  L  T  S  E  L  N  R  N  *  S  C  I  T  R  :  M  L  T  S  E  L  N  L  N  *  S  C  I  T  E  M  L  T  S  E  L  N  R  N  *  N  C  I  T  R  M  L  T  S  E  L  K  L  N  *  S  C  I  T  Q  M  L  K  S  E  L  N  L  N  *  S  C  I  T  Q  M  L  T  R  D  H  T  Y  *  R  R  E  L  N  T  R  H  S  Q  E  L  E  S  N  E  I  S  T  *  I  I  K  Q  K  G  T  Q  V  T  *  T  *  I  K  R  N  L  N   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C06SLe0039G15.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="+" PGL_start="41809" PGL_stop="42299"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="41809" e_stop="42299"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.937"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.937">
            <gDNA_exon_boundary e_start="41809" e_stop="42299" e_length="491"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="41809" stop="42298"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E367812" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="41841" stop="42299"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E392488" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CACATGTGGGAGATTTCAATTGGATGAGTTACCATGTCCACATGCTTTTGCCGTTTTAACAATAAAACACATTGGTTATGAGAAATATTGTTCGGCTTACTATACAAGAAAAAATTTATTGTTGACATATCAATTTCAAATGGATCCCCTGCCAAATGAAAGTACATGGAACACAGCAACACATGTTCTTGAAAATGTTGTACTTCCACCTCATGGAAAGAGACCTCCGGGAAGGCCAAAAAATAAAAGACATACTCACTGAGAGAAGATGGATTCAAGAAGGCGAAAATTACATGCAGCAATTGTGGACAATATGATCACAACAAGAAGACTTGCAAAAATGTCAGGCCTTATGATCAAGAATAAAAAAAATAATTTGTTTTATTAGTTTGTTTTAGAAGCTCATTGACTCTACGAATTTGGATCATGTTCGGTTATATGGTTTATATTCTTAGTTCTGCATTCTCGTGTTATTCAGTTTAATAGAATGC</gDNA_template>
            <first_frame> H  M  W  E  I  S  I  G  *  V  T  M  S  T  C  F  C  R  F  N  N  K  T  H  W  L  *  E  I  L  F  G  L  L  Y  K  K  K  F  I  V  D  I  S  I  S  N  G  S  P  A  K  *  K  Y  M  E  H  S  N  T  C  S  *  K  C  C  T  S  T  S  W  K  E  T  S  G  K  A  K  K  *  K  T  Y  S  L  R  E  D  G  F  K  K  A  K  I  T  C  S  N  C  G  Q  Y  D  H  N  K  K  T  C  K  N  V  R  P  Y  D  Q  E  *  K  K  *  F  V  L  L  V  C  F  R  S  S  L  T  L  R  I  W  I  M  F  G  Y  M  V  Y  I  L  S  S  A  F  S  C  Y  S  V  *  *  N   </first_frame>
            <second_frame>  T  C  G  R  F  Q  L  D  E  L  P  C  P  H  A  F  A  V  L  T  I  K  H  I  G  Y  E  K  Y  C  S  A  Y  Y  T  R  K  N  L  L  L  T  Y  Q  F  Q  M  D  P  L  P  N  E  S  T  W  N  T  A  T  H  V  L  E  N  V  V  L  P  P  H  G  K  R  P  P  G  R  P  K  N  K  R  H  T  H  *  E  K  M  D  S  R  R  R  K  L  H  A  A  I  V  D  N  M  I  T  T  R  R  L  A  K  M  S  G  L  M  I  K  N  K  K  N  N  L  F  Y  *  F  V  L  E  A  H  *  L  Y  E  F  G  S  C  S  V  I  W  F  I  F  L  V  L  H  S  R  V  I  Q  F  N  R  M  </second_frame>
            <third_frame>   H  V  G  D  F  N  W  M  S  Y  H  V  H  M  L  L  P  F  *  Q  *  N  T  L  V  M  R  N  I  V  R  L  T  I  Q  E  K  I  Y  C  *  H  I  N  F  K  W  I  P  C  Q  M  K  V  H  G  T  Q  Q  H  M  F  L  K  M  L  Y  F  H  L  M  E  R  D  L  R  E  G  Q  K  I  K  D  I  L  T  E  R  R  W  I  Q  E  G  E  N  Y  M  Q  Q  L  W  T  I  *  S  Q  Q  E  D  L  Q  K  C  Q  A  L  *  S  R  I  K  K  I  I  C  F  I  S  L  F  *  K  L  I  D  S  T  N  L  D  H  V  R  L  Y  G  L  Y  S  *  F  C  I  L  V  L  F  S  L  I  E  C </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06SLe0039G15.1" strand="+"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="41810" stop="42070"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>258</number_coding_nucleotides>
                  <number_encoded_amino_acids>86</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TCGRFQLDELPCPHAFAVLTIKHIGYEKYCSAYYTRKNLLLTYQFQMDPLPNESTWNTATHVLENVVLPPHGKRPPGRPKNKRHTH*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="-" PGL_start="58929" PGL_stop="58655"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="58929" e_stop="58655"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.913"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.913">
            <gDNA_exon_boundary e_start="58929" e_stop="58655" e_length="275"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58929" stop="58655"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E223449" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GTGCAGGCACAGGTGGACGCTAGAACTACAGGTTCGTTGTTGCAGCTATCCGGACATCAGTATTCATCCGGAGTTTGGTAGGTCCTCATGCTTTCGAGGATGCTACTGTTTTACATTCTAGCGTAGTTTTAGAGTTGAGCTAGCGGAGCATGTTCCACTAGCGTTTCTTTCCTGTTTTGGTTCAAACTTTGTATTGGTGCTATTTTGGCCGATATATAATTAATACTTAATGAATTATTCCTTTCAGTTGCTTATCTCTTAAATGTTAGATGGTT</gDNA_template>
            <first_frame> V  Q  A  Q  V  D  A  R  T  T  G  S  L  L  Q  L  S  G  H  Q  Y  S  S  G  V  W  *  V  L  M  L  S  R  M  L  L  F  Y  I  L  A  *  F  *  S  *  A  S  G  A  C  S  T  S  V  S  F  L  F  W  F  K  L  C  I  G  A  I  L  A  D  I  *  L  I  L  N  E  L  F  L  S  V  A  Y  L  L  N  V  R  W   </first_frame>
            <second_frame>  C  R  H  R  W  T  L  E  L  Q  V  R  C  C  S  Y  P  D  I  S  I  H  P  E  F  G  R  S  S  C  F  R  G  C  Y  C  F  T  F  *  R  S  F  R  V  E  L  A  E  H  V  P  L  A  F  L  S  C  F  G  S  N  F  V  L  V  L  F  W  P  I  Y  N  *  Y  L  M  N  Y  S  F  Q  L  L  I  S  *  M  L  D  G  </second_frame>
            <third_frame>   A  G  T  G  G  R  *  N  Y  R  F  V  V  A  A  I  R  T  S  V  F  I  R  S  L  V  G  P  H  A  F  E  D  A  T  V  L  H  S  S  V  V  L  E  L  S  *  R  S  M  F  H  *  R  F  F  P  V  L  V  Q  T  L  Y  W  C  Y  F  G  R  Y  I  I  N  T  *  *  I  I  P  F  S  C  L  S  L  K  C  *  M  V </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C06SLe0039G15.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="+" PGL_start="69020" PGL_stop="69573"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="69020" e_stop="69573"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.917"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.917">
            <gDNA_exon_boundary e_start="69020" e_stop="69573" e_length="554"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69020" stop="69573"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E329287" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ACCTGGCCCATCTGGTACTAGGGCGGTGACTCCTCCACCGACTGAGGAAGTGTTAAGAGAGGGTGAGGAAGGGGAAAATGAGCAAGTGCAGAATGAGAAATTACCACCCCAACCTACCCCAGAGATGATTAATCAGGTTCTTGCTTATCTTAGCGGGTTATCTGATCAGGGCCAGACCCCTCCAGTGTTTTCTGCACCAGCACATCAGGTTACGGAGGTACCACATGCAGCTACTGTGGCTCCCTGCATGGATGCCTCATTGGGAATAGACACGTTTCCTCGGTTGACTACAGGGCCTATAATGACAAGTGATCAGCATGAACTTTTCAGTAAGTTCTTGAAATTGAAACCCCCAGTCTTCAAGGGTGCTGAATCTGAGGATGCCTATGATTTTCTAGTTGATTGTCATGAGCTACTACACAAGATGGGTATAGTAGAACGATTTGGCGTTGAGTTTGTGACTTATCAGTTTCAAGGGAACGCCAAAATGTGGTGGCGGTCACATGTTGAGTGTCAACCAACAGAGGCACCACCTATGACTTGGGCATCATTCT</gDNA_template>
            <first_frame> T  W  P  I  W  Y  *  G  G  D  S  S  T  D  *  G  S  V  K  R  G  *  G  R  G  K  *  A  S  A  E  *  E  I  T  T  P  T  Y  P  R  D  D  *  S  G  S  C  L  S  *  R  V  I  *  S  G  P  D  P  S  S  V  F  C  T  S  T  S  G  Y  G  G  T  T  C  S  Y  C  G  S  L  H  G  C  L  I  G  N  R  H  V  S  S  V  D  Y  R  A  Y  N  D  K  *  S  A  *  T  F  Q  *  V  L  E  I  E  T  P  S  L  Q  G  C  *  I  *  G  C  L  *  F  S  S  *  L  S  *  A  T  T  Q  D  G  Y  S  R  T  I  W  R  *  V  C  D  L  S  V  S  R  E  R  Q  N  V  V  A  V  T  C  *  V  S  T  N  R  G  T  T  Y  D  L  G  I  I   </first_frame>
            <second_frame>  P  G  P  S  G  T  R  A  V  T  P  P  P  T  E  E  V  L  R  E  G  E  E  G  E  N  E  Q  V  Q  N  E  K  L  P  P  Q  P  T  P  E  M  I  N  Q  V  L  A  Y  L  S  G  L  S  D  Q  G  Q  T  P  P  V  F  S  A  P  A  H  Q  V  T  E  V  P  H  A  A  T  V  A  P  C  M  D  A  S  L  G  I  D  T  F  P  R  L  T  T  G  P  I  M  T  S  D  Q  H  E  L  F  S  K  F  L  K  L  K  P  P  V  F  K  G  A  E  S  E  D  A  Y  D  F  L  V  D  C  H  E  L  L  H  K  M  G  I  V  E  R  F  G  V  E  F  V  T  Y  Q  F  Q  G  N  A  K  M  W  W  R  S  H  V  E  C  Q  P  T  E  A  P  P  M  T  W  A  S  F  </second_frame>
            <third_frame>   L  A  H  L  V  L  G  R  *  L  L  H  R  L  R  K  C  *  E  R  V  R  K  G  K  M  S  K  C  R  M  R  N  Y  H  P  N  L  P  Q  R  *  L  I  R  F  L  L  I  L  A  G  Y  L  I  R  A  R  P  L  Q  C  F  L  H  Q  H  I  R  L  R  R  Y  H  M  Q  L  L  W  L  P  A  W  M  P  H  W  E  *  T  R  F  L  G  *  L  Q  G  L  *  *  Q  V  I  S  M  N  F  S  V  S  S  *  N  *  N  P  Q  S  S  R  V  L  N  L  R  M  P  M  I  F  *  L  I  V  M  S  Y  Y  T  R  W  V  *  *  N  D  L  A  L  S  L  *  L  I  S  F  K  G  T  P  K  C  G  G  G  H  M  L  S  V  N  Q  Q  R  H  H  L  *  L  G  H  H  S </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06SLe0039G15.1" strand="+"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="69021" stop="69572"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>552</number_coding_nucleotides>
                  <number_encoded_amino_acids>184</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PGPSGTRAVTPPPTEEVLREGEEGENEQVQNEKLPPQPTPEMINQVLAYLSGLSDQGQTPPVFSAPAHQVTEVPHAATVAPCMDASLGIDTFPRLTTGPIMTSDQHELFSKFLKLKPPVFKGAESEDAYDFLVDCHELLHKMGIVERFGVEFVTYQFQGNAKMWWRSHVECQPTEAPPMTWASF</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="-" PGL_start="71622" PGL_stop="70371"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="71622" e_stop="70371"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.901"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.901">
            <gDNA_exon_boundary e_start="71622" e_stop="70371" e_length="1252"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71622" stop="70943"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E368762" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71104" stop="70444"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E351414" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70701" stop="70371"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E352716" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GTCTTACCCAATTCTTCACTGCTTCGATCTTAGAAGGATCCACCATCACTCCATCCTTAGAAACTACGTGCCCCAAGAAGGACACTGAATCTAGCCAAAACTCACACTTAGAGAATTTGGCATAAAGCTTTCTCTCCCTCAATAATTCCAATACCATTCTCAAGTGCTCCTCATGTTCTTTCTTGCTCTTTGAGTATACCAGTATATCATCAATGAACACGATGACACAGAGATCCAAATAGGGCTTAAAAATCCCGTTCATTAAGCTCATGAACGCAGTAGGGGCATTCGTAAGCCCAAAAGACATTACTAAGAACTCATAATGTCCATATCTGGTCCGAAAAGCAGTTTTGGGCACATCCGTTGCCCGTATTTTCAGTTGATGATAACCAGACCTCAAATCGATTTTTGAGAAGGTACAAGCACCTTGTAACTGATCGAACAAATCATCAATGCGAGGAAGAGGATACTTGTTCTTAATAGTTACCTTGTTCAATTGCCTGTAATCTATGCACATCCTAAAACTTCCATCCTTCTTCTTCACAAACAAAACAGAAGCAGCCCAAGGGGATGTACTTGATCTAATGAAGCCTTTGCTCAACAACTCTTGAAGTTGGGCCTTTAACTCCCTTAACTCAGCGGGAGCCATTCTATAAGGGGGTATAGAAATGGGGCGAGTACCCAGTTCAAGATCGATGCAGAAGTCAATATTTCTATCCGGTGGCATACCAGGAAGGTCTGCAGGAAACACATCTAAAAACTCGCGGACTATCGAAACCGACTCAATTGAAATTACTTGGGTGGTATCATCCTTGAGGTGTTCCAAGAAAGCTAAACAACCCTTACTAACCATTCTCTTAGCACGAAGAAAGGAGACGATACAAACCGGATTGGAAGTGTAGTCACCCTCCCACACTAACGGATCTGTCCCAGGCTTGGCTAACGTCACAGTTTTAGCATTACAATCCAAGATTGCAAAATTTGGAGAAAGCCAAGTCATACCCAGAATTACATCGAATTCAACCATTTCTAAGATAACCAAGTCTACATGAGTATTGCTCCCCACAAAAGTCACAAGACAAGACCTATACACCCTTTCAACTATCACAGACTCACCCACCGGAGTAGAAACACGAATAGACATGTCAAGCAATTCACAATGTAAGTAAAGACCATTAGCAAATCAGGAAGATACATAAGAAAATGTGGATCCAGGATCAAACAATACAGAAGCCATGCAATCACAAACCAA</gDNA_template>
            <first_frame> V  L  P  N  S  S  L  L  R  S  *  K  D  P  P  S  L  H  P  *  K  L  R  A  P  R  R  T  L  N  L  A  K  T  H  T  *  R  I  W  H  K  A  F  S  P  S  I  I  P  I  P  F  S  S  A  P  H  V  L  S  C  S  L  S  I  P  V  Y  H  Q  *  T  R  *  H  R  D  P  N  R  A  *  K  S  R  S  L  S  S  *  T  Q  *  G  H  S  *  A  Q  K  T  L  L  R  T  H  N  V  H  I  W  S  E  K  Q  F  W  A  H  P  L  P  V  F  S  V  D  D  N  Q  T  S  N  R  F  L  R  R  Y  K  H  L  V  T  D  R  T  N  H  Q  C  E  E  E  D  T  C  S  *  *  L  P  C  S  I  A  C  N  L  C  T  S  *  N  F  H  P  S  S  S  Q  T  K  Q  K  Q  P  K  G  M  Y  L  I  *  *  S  L  C  S  T  T  L  E  V  G  P  L  T  P  L  T  Q  R  E  P  F  Y  K  G  V  *  K  W  G  E  Y  P  V  Q  D  R  C  R  S  Q  Y  F  Y  P  V  A  Y  Q  E  G  L  Q  E  T  H  L  K  T  R  G  L  S  K  P  T  Q  L  K  L  L  G  W  Y  H  P  *  G  V  P  R  K  L  N  N  P  Y  *  P  F  S  *  H  E  E  R  R  R  Y  K  P  D  W  K  C  S  H  P  P  T  L  T  D  L  S  Q  A  W  L  T  S  Q  F  *  H  Y  N  P  R  L  Q  N  L  E  K  A  K  S  Y  P  E  L  H  R  I  Q  P  F  L  R  *  P  S  L  H  E  Y  C  S  P  Q  K  S  Q  D  K  T  Y  T  P  F  Q  L  S  Q  T  H  P  P  E  *  K  H  E  *  T  C  Q  A  I  H  N  V  S  K  D  H  *  Q  I  R  K  I  H  K  K  M  W  I  Q  D  Q  T  I  Q  K  P  C  N  H  K  P  </first_frame>
            <second_frame>  S  Y  P  I  L  H  C  F  D  L  R  R  I  H  H  H  S  I  L  R  N  Y  V  P  Q  E  G  H  *  I  *  P  K  L  T  L  R  E  F  G  I  K  L  S  L  P  Q  *  F  Q  Y  H  S  Q  V  L  L  M  F  F  L  A  L  *  V  Y  Q  Y  I  I  N  E  H  D  D  T  E  I  Q  I  G  L  K  N  P  V  H  *  A  H  E  R  S  R  G  I  R  K  P  K  R  H  Y  *  E  L  I  M  S  I  S  G  P  K  S  S  F  G  H  I  R  C  P  Y  F  Q  L  M  I  T  R  P  Q  I  D  F  *  E  G  T  S  T  L  *  L  I  E  Q  I  I  N  A  R  K  R  I  L  V  L  N  S  Y  L  V  Q  L  P  V  I  Y  A  H  P  K  T  S  I  L  L  L  H  K  Q  N  R  S  S  P  R  G  C  T  *  S  N  E  A  F  A  Q  Q  L  L  K  L  G  L  *  L  P  *  L  S  G  S  H  S  I  R  G  Y  R  N  G  A  S  T  Q  F  K  I  D  A  E  V  N  I  S  I  R  W  H  T  R  K  V  C  R  K  H  I  *  K  L  A  D  Y  R  N  R  L  N  *  N  Y  L  G  G  I  I  L  E  V  F  Q  E  S  *  T  T  L  T  N  H  S  L  S  T  K  K  G  D  D  T  N  R  I  G  S  V  V  T  L  P  H  *  R  I  C  P  R  L  G  *  R  H  S  F  S  I  T  I  Q  D  C  K  I  W  R  K  P  S  H  T  Q  N  Y  I  E  F  N  H  F  *  D  N  Q  V  Y  M  S  I  A  P  H  K  S  H  K  T  R  P  I  H  P  F  N  Y  H  R  L  T  H  R  S  R  N  T  N  R  H  V  K  Q  F  T  M  *  V  K  T  I  S  K  S  G  R  Y  I  R  K  C  G  S  R  I  K  Q  Y  R  S  H  A  I  T  N  Q </second_frame>
            <third_frame>   L  T  Q  F  F  T  A  S  I  L  E  G  S  T  I  T  P  S  L  E  T  T  C  P  K  K  D  T  E  S  S  Q  N  S  H  L  E  N  L  A  *  S  F  L  S  L  N  N  S  N  T  I  L  K  C  S  S  C  S  F  L  L  F  E  Y  T  S  I  S  S  M  N  T  M  T  Q  R  S  K  *  G  L  K  I  P  F  I  K  L  M  N  A  V  G  A  F  V  S  P  K  D  I  T  K  N  S  *  C  P  Y  L  V  R  K  A  V  L  G  T  S  V  A  R  I  F  S  *  *  *  P  D  L  K  S  I  F  E  K  V  Q  A  P  C  N  *  S  N  K  S  S  M  R  G  R  G  Y  L  F  L  I  V  T  L  F  N  C  L  *  S  M  H  I  L  K  L  P  S  F  F  F  T  N  K  T  E  A  A  Q  G  D  V  L  D  L  M  K  P  L  L  N  N  S  *  S  W  A  F  N  S  L  N  S  A  G  A  I  L  *  G  G  I  E  M  G  R  V  P  S  S  R  S  M  Q  K  S  I  F  L  S  G  G  I  P  G  R  S  A  G  N  T  S  K  N  S  R  T  I  E  T  D  S  I  E  I  T  W  V  V  S  S  L  R  C  S  K  K  A  K  Q  P  L  L  T  I  L  L  A  R  R  K  E  T  I  Q  T  G  L  E  V  *  S  P  S  H  T  N  G  S  V  P  G  L  A  N  V  T  V  L  A  L  Q  S  K  I  A  K  F  G  E  S  Q  V  I  P  R  I  T  S  N  S  T  I  S  K  I  T  K  S  T  *  V  L  L  P  T  K  V  T  R  Q  D  L  Y  T  L  S  T  I  T  D  S  P  T  G  V  E  T  R  I  D  M  S  S  N  S  Q  C  K  *  R  P  L  A  N  Q  E  D  T  *  E  N  V  D  P  G  S  N  N  T  E  A  M  Q  S  Q  T   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06SLe0039G15.1" strand="-"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="70966" stop="70721"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>243</number_coding_nucleotides>
                  <number_encoded_amino_acids>81</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GGIEMGRVPSSRSMQKSIFLSGGIPGRSAGNTSKNSRTIETDSIEITWVVSSLRCSKKAKQPLLTILLARRKETIQTGLEV*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="+" PGL_start="70401" PGL_stop="71061"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="70401" e_stop="71061"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.905"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.905">
            <gDNA_exon_boundary e_start="70401" e_stop="71061" e_length="661"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70401" stop="71061"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E352117" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTTGATCCTGGATCCACATTTTCTTATGTATCTTCCTGATTTGCTAATGGTCTTTACTTACATTGTGAATTGCTTGACATGTCTATTCGTGTTTCTACTCCGGTGGGTGAGTCTGTGATAGTTGAAAGGGTGTATAGGTCTTGTCTTGTGACTTTTGTGGGGAGCAATACTCATGTAGACTTGGTTATCTTAGAAATGGTTGAATTCGATGTAATTCTGGGTATGACTTGGCTTTCTCCAAATTTTGCAATCTTGGATTGTAATGCTAAAACTGTGACGTTAGCCAAGCCTGGGACAGATCCGTTAGTGTGGGAGGGTGACTACACTTCCAATCCGGTTTGTATCGTCTCCTTTCTTCGTGCTAAGAGAATGGTTAGTAAGGGTTGTTTAGCTTTCTTGGAACACCTCAAGGATGATACCACCCAAGTAATTTCAATTGAGTCGGTTTCGATAGTCCGCGAGTTTTTAGATGTGTTTCCTGCAGACCTTCCTGGTATGCCACCGGATAGAAATATTGACTTCTGCATCGATCTTGAACTGGGTACTCGCCCCATTTCTATACCCCCTTATAGAATGGCTCCCGCTGAGTTAAGGGAGTTAAAGGCCCAACTTCAAGAGTTGTTGAGCAAAGGCTTCATTAGATCAAGTACATCCCCTTGGG</gDNA_template>
            <first_frame> F  D  P  G  S  T  F  S  Y  V  S  S  *  F  A  N  G  L  Y  L  H  C  E  L  L  D  M  S  I  R  V  S  T  P  V  G  E  S  V  I  V  E  R  V  Y  R  S  C  L  V  T  F  V  G  S  N  T  H  V  D  L  V  I  L  E  M  V  E  F  D  V  I  L  G  M  T  W  L  S  P  N  F  A  I  L  D  C  N  A  K  T  V  T  L  A  K  P  G  T  D  P  L  V  W  E  G  D  Y  T  S  N  P  V  C  I  V  S  F  L  R  A  K  R  M  V  S  K  G  C  L  A  F  L  E  H  L  K  D  D  T  T  Q  V  I  S  I  E  S  V  S  I  V  R  E  F  L  D  V  F  P  A  D  L  P  G  M  P  P  D  R  N  I  D  F  C  I  D  L  E  L  G  T  R  P  I  S  I  P  P  Y  R  M  A  P  A  E  L  R  E  L  K  A  Q  L  Q  E  L  L  S  K  G  F  I  R  S  S  T  S  P  W  </first_frame>
            <second_frame>  L  I  L  D  P  H  F  L  M  Y  L  P  D  L  L  M  V  F  T  Y  I  V  N  C  L  T  C  L  F  V  F  L  L  R  W  V  S  L  *  *  L  K  G  C  I  G  L  V  L  *  L  L  W  G  A  I  L  M  *  T  W  L  S  *  K  W  L  N  S  M  *  F  W  V  *  L  G  F  L  Q  I  L  Q  S  W  I  V  M  L  K  L  *  R  *  P  S  L  G  Q  I  R  *  C  G  R  V  T  T  L  P  I  R  F  V  S  S  P  F  F  V  L  R  E  W  L  V  R  V  V  *  L  S  W  N  T  S  R  M  I  P  P  K  *  F  Q  L  S  R  F  R  *  S  A  S  F  *  M  C  F  L  Q  T  F  L  V  C  H  R  I  E  I  L  T  S  A  S  I  L  N  W  V  L  A  P  F  L  Y  P  L  I  E  W  L  P  L  S  *  G  S  *  R  P  N  F  K  S  C  *  A  K  A  S  L  D  Q  V  H  P  L  G </second_frame>
            <third_frame>   *  S  W  I  H  I  F  L  C  I  F  L  I  C  *  W  S  L  L  T  L  *  I  A  *  H  V  Y  S  C  F  Y  S  G  G  *  V  C  D  S  *  K  G  V  *  V  L  S  C  D  F  C  G  E  Q  Y  S  C  R  L  G  Y  L  R  N  G  *  I  R  C  N  S  G  Y  D  L  A  F  S  K  F  C  N  L  G  L  *  C  *  N  C  D  V  S  Q  A  W  D  R  S  V  S  V  G  G  *  L  H  F  Q  S  G  L  Y  R  L  L  S  S  C  *  E  N  G  *  *  G  L  F  S  F  L  G  T  P  Q  G  *  Y  H  P  S  N  F  N  *  V  G  F  D  S  P  R  V  F  R  C  V  S  C  R  P  S  W  Y  A  T  G  *  K  Y  *  L  L  H  R  S  *  T  G  Y  S  P  H  F  Y  T  P  L  *  N  G  S  R  *  V  K  G  V  K  G  P  T  S  R  V  V  E  Q  R  L  H  *  I  K  Y  I  P  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06SLe0039G15.1" strand="+"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="70440" stop="71060"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>621</number_coding_nucleotides>
                  <number_encoded_amino_acids>207</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FANGLYLHCELLDMSIRVSTPVGESVIVERVYRSCLVTFVGSNTHVDLVILEMVEFDVILGMTWLSPNFAILDCNAKTVTLAKPGTDPLVWEGDYTSNPVCIVSFLRAKRMVSKGCLAFLEHLKDDTTQVISIESVSIVREFLDVFPADLPGMPPDRNIDFCIDLELGTRPISIPPYRMAPAELRELKAQLQELLSKGFIRSSTSPW</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="-" PGL_start="97981" PGL_stop="97707"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="97981" e_stop="97707"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.913"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.913">
            <gDNA_exon_boundary e_start="97981" e_stop="97707" e_length="275"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="97981" stop="97707"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E223449" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GTGCAGGCACAGGTGGACGCTAGAACTACAGGTTCGTTGTTGCAGCTATCCGGACATCAGTATTCATCTGGAGTTTGGTAGGTCCTCATGCTTTCGAGGATGCTACTGTTTTACATTCTAGCGTAGTTTTAGAGTTGAGCTAGCGGAGCATGTTCCACTAGCGTTTCTTTCCTGTTTTGGTTCAAACTTTGTATTGGTGCTATTTTGGCCGATATACAATTAATACTTAATGAATTATTCCTTTCAGTTGCTTATCTCTTAAATGTTAGATGGTT</gDNA_template>
            <first_frame> V  Q  A  Q  V  D  A  R  T  T  G  S  L  L  Q  L  S  G  H  Q  Y  S  S  G  V  W  *  V  L  M  L  S  R  M  L  L  F  Y  I  L  A  *  F  *  S  *  A  S  G  A  C  S  T  S  V  S  F  L  F  W  F  K  L  C  I  G  A  I  L  A  D  I  Q  L  I  L  N  E  L  F  L  S  V  A  Y  L  L  N  V  R  W   </first_frame>
            <second_frame>  C  R  H  R  W  T  L  E  L  Q  V  R  C  C  S  Y  P  D  I  S  I  H  L  E  F  G  R  S  S  C  F  R  G  C  Y  C  F  T  F  *  R  S  F  R  V  E  L  A  E  H  V  P  L  A  F  L  S  C  F  G  S  N  F  V  L  V  L  F  W  P  I  Y  N  *  Y  L  M  N  Y  S  F  Q  L  L  I  S  *  M  L  D  G  </second_frame>
            <third_frame>   A  G  T  G  G  R  *  N  Y  R  F  V  V  A  A  I  R  T  S  V  F  I  W  S  L  V  G  P  H  A  F  E  D  A  T  V  L  H  S  S  V  V  L  E  L  S  *  R  S  M  F  H  *  R  F  F  P  V  L  V  Q  T  L  Y  W  C  Y  F  G  R  Y  T  I  N  T  *  *  I  I  P  F  S  C  L  S  L  K  C  *  M  V </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C06SLe0039G15.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 212 chains have been computed
$ 
$ memory statistics:
$ 307920 bytes spliced alignments in total
$ 34 spliced alignments have been stored
$ 9056 bytes was the average size of a spliced alignment
$ 19592 bytes predicted gene locations in total
$ 12 predicted gene locations have been stored
$ 1632 bytes was the average size of a predicted gene location
$ 1 megabytes was the average size of the backtrace matrix
$ 286 backtrace matrices have been allocated
$ 
$ date finished: 2009-01-16 20:52:32
-->
