<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-01-16 20:56:53"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C06SLe0045F21-xnYek/GenomeThreader_SGN_U_tomato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C06SLe0045F21-xnYek/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLe0045F21-xnYek/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U336426" ref_strand="+" ref_description="SGN-U336426        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: | Symbol: None | importin alpha-1 subunit, putative (IMPA1), similar to importin alpha-1 subunit (Karyopherin alpha-1 subunit, KAP alpha) (Arabidopsis thaliana) SWISS-PROT:Q96321 | chr3:2120330-2124137 FORWARD | Aliases: F3E22.14(evalue: 6e-114, score=231) genbank/nr: importin(evalue: 4e-140, score=267)">
      <seq>cgttattatcgagttgagttcagaatttcgattcaccggagctatgtcactgaggccgaactcgagaacggaggctcgccggagcaggtacaaagttgccgtagatgcggaggaaggacggagaagaagggaagataacatggttgagatccggaagaataaaagagaagagaatttgcttaagaagcgtcgtgaaggtttactacaagctcagcagtttcctagcactgctgctgtttctcaccttgataagaagctggagactcttcctgaattgattgctggggtttggtctgatgacagcagtttgcaacttgaatgtacaacacaattccggaaactgctttcaattgaacgcaatcctcctatagaggaagtgatacagtctggggtagttcctcgctttgttgaatttcttgctcgagatgactatcatcaactgcaggtttttttacaaaatctattatttttgttttttgttttgcagttcatctttatttctaatgttcacataattggcatcctataatctagtttgaggcagcgtgggctcttacaaatattgcgtctggtacatcagaaaacactaaagttgtgattgattatggttctgtcccaattttcatcagacttctaagttcaccaagtgatgatgtccgtgaacaggcagtttgggctttgggaaatattgctggtgactcacccaagtatcgtgaccttgtgcttggccatggagctttagcggcattgctggcacaatttaatgagcaggcaaagctatctatgttgagaaatgctacctggacattgtcaaacttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLe0045F21-xnYek/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06SLe0045F21.1" temp_strand="-" temp_description="C06SLe0045F21.1  AC216658.1 htgs_phase:1 submitted_to_sgn_as:C06SLe0045F21 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="4152" stop="259"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="3856" g_stop="3601" g_length="256"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="256" r_length="256" r_score="0.980"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="3600" i_stop="1526" i_length="2075">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.971" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="1525" g_stop="1429" g_length="97"/>
          <reference_exon_boundary r_type="cDNA" r_start="257" r_stop="353" r_length="97" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="1428" i_stop="1304" i_length="125">
            <donor d_prob="0.880" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="1303" g_stop="990" g_length="314"/>
          <reference_exon_boundary r_type="cDNA" r_start="354" r_stop="666" r_length="313" r_score="0.984"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="989" i_stop="712" i_length="278">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="711" g_stop="559" g_length="153"/>
          <reference_exon_boundary r_type="cDNA" r_start="667" r_stop="819" r_length="153" r_score="0.980"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLe0045F21.1" gen_strand="-" ref_id="SGN-U336426" ref_strand="+">
        <total_alignment_score>0.984</total_alignment_score>
        <cumulative_length_of_scored_exons>820</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLe0045F21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U336426" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="3856" e_stop="3601"/>
          <exon e_start="1525" e_stop="1429"/>
          <exon e_start="1303" e_stop="990"/>
          <exon e_start="711" e_stop="559"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCGATTATCGAGTTGAGTTCAGAATTTCGATTCACCGGAGCTATGTCACTGAGGCCGAACTCGAGAACGGAGGCTCGCCGGAGCAGGTACAAAGTTGCCGTCGATGCGGAGGAAGGACGGAGAAGAAGGGAAGATAACATGGTTGAGATCCGGAAGAATAAAAGAGAAGAGAATTTGCTTAAGAAGCGTCGTGAAGGTTTACTACAAGCTCAGCAGTTTCCTAGCACTGCTGCTGTTTCTCACCTTGATAAGAAGGTATAGATTTTTTTCGTTGATTAACTTTTAGTTTCTTAGATACATATATTTTGATCGAATTTGATTGTCTGATTTGAATTTTCAAGTGCGATCAATGTTTACTCAGTGTGTGTCCTTGTGAGCTTAATTCGTTACTTCGATTTTTTCGTTTAGTTACTTGCTTCATTCAGTTCTAAACCTCAATTATGCTTAATTGATTCAATTATTTGTTTGAAGTTCAAGTGTGATCACTGTTTACTCGGTTTTCTCTTTTACGAGCTTAGTTCAGTACTTCGTATTTTTTGTTATTTAAATGCTTAATTTAGTTCTTAGATTCACTTATGCTTATTGAAATCAATTATTTGATTGAAATGCAAGTGCGTCAATGTTTACTCTCGGTGTTCGTCCTATCTAAGATAATCGGCTACTTGTATTTTTCGTTATTTAAATGCTTCATTCAGTTCTTACCTTTGCTTATCCTCATTGGATTCAATTGTTTTATCAAGACTAATTCATCTTTAGTTGCAAAGTGCAGCGCCAATTAATACCAAAAAATTAAAATATTTAGTTGCATATATATATATATATATATTATATATATATATATATAAAATCAAAATCTCAATAGAAGTAGCTTTGAAGATGAAGGAGGAGGAGGAGGAAAACGAAACCAAGGAAGAAGGAAAGAAGAAATACGTTGTGGTTGGACTTTGGAGTCGCCGGAAAAGTCTGACTGGTCATTGCCTCACTAGAGAAGTCTAGTCGAGTCGATGGGTTGGAGTCAAGTTGTAGTTTACGAATGCAACTGTGCAAATTTGGAAAGAAAACCCTAAAATTTAACTTTTAAAACACTACATTTTTTTTTTGAAATAGGTAACTTTCTTTTAAAACCTTAAATTGATTGTTTTTTTTTACGAAAATACAAAAAGTGACTCCTTGGTCGCCATGGCGTTGCCTTTTGAAGATCGCCTCGCCACAAAGATAATAGGCGCTGAAGGATCGCCTTGCCTTGCCTCTTGCCATTGATGATGAGACGATTACCTTCCACGACATTGTCTCAGCCGTATGATACCGATAGTGTCATAGGAATCAGTTATTTTATTTGCATGGCAAGTTCTATCAATTTTACATGGTGTCATCATTTCCAGCTTAATTTGCTACGCGTATTAATTACTTGCTCTATTCAGTTCTTAGCCTCACTAGTCCTTATTGAATTCAATTGTTTATTTTAATTGCAAGTGCGATCAAGACTAATTCATCTTTTCTCTTTGAGCTTACTCAGCAGCGTGAATTTTTGTTAACTACTCTCAGTCTTATGATGCAGATATTGTGATCGGTTTCAGTTGCTTTAGTTGAATTGCAAGTGCTATCAATTTTTACTTTCCAGCATAATTTGCTACTTGTTTTTACCTACTTTCTCCATTCAGTTCTTAGCCTCACTAATCCTTATTGGATTCAATTGTGTATTTGAATTGCAACTGCGATCAGGACTAGTTGGTATTGATCATTTCTAGCATTTATTTTCATTAATTACTTGCTTCATTCTGTTCTTAGGCTGAATTATCCAATTCTATTTGCATTCAGTTTCTATTTGAATGGCTAGCGCGATCAATGTTTACTCAGTGTGCATTCTTTCTTCATTCAGTTCTAAGCCTCATTTTTCCTTGATGGATACAATCTTTTATTTGAATTGCTAGTGCAATCAATGGTTACTTGGTATTCATCCTTTCAAGCATAATTGGGTACTATTATTTTTTGGTAATTACCTGCTTCACTCAGTTCTTAAGGATAACTTTTTTTACTTGTTAGAGAAGCATAATGTTTTCAATAGTTAGGTATACAGTCTGCTTTGTTTCTCCCTTGTCCGCAAAGCAAAAATGACATAATCACTATTTGAAGAGTCAAAAAGGTATTTGAAAAATACTATTTAAGAAAAAGGAAGAAATCTATACACTGAAAGATTAGATTAGTTGATTTCTACTTCAAATATAATCATCCTTGCAGCTATGGAGGAGTAGCATTGCGCCAAAAATAATATCATGCTGCTCTAGCAACAAACTTATCTGATTCAATTTTATTGGTTTATAACCTTTCAGCTGGAGACTCTTCCTGAATTGATTGCTGGGGTTTGGTCTGATGACAGCAGTTTGCAACTTGAATGTACAACACAATTCCGGAAACTGCTTTCAATTGGTCAGTGTTGCTTTGCTTTTTTCCTAAATGTATTTCTGTTTGATCACCTTGACAATGAATGTTTTTCCTCTCTGTATCTTTGTGTCTTAATTAGTATGCGTGTTCACTTCTGGTTGTTTTGGCAGAACGCAATCCTCCTATAGAGGAAGTGATACAGTCTGGGGTAGTTCCTCGCTTTGTTGAATTTCTTGCTCGAGATGACTATCCTCAACTGCAGGTTTTTTTACAAAATCTATTATTTTTGTTTTTTGTTTTGCAGTTCCATCTTTATTTCTAATGTTTACATAATTGGCATTCTATAATCTAGTTTGAGGCAGCGTGGGCTCTTACAAATATTGCATCTGGTACATCAGAAAACACTAAAGTTGTGATTGATTATGGTTCTGTCCCAATTTTCATCAGACTTCTAAGTTCACCAAGTGATGATGTCCGTGAACAGGTAAAACTTTATATATAAGAGGGCTAAGCTTTCATGTTTCTTCTCATAATTGTCATGATATTATGTCTATTTTTCTTAAAAAAATTGGGGTTACGGGAAGGAGTAATGGGGGAGAGAATTACAAAGTGGAAATCAAACCCTCACTGGCAAGATGAAAGTTCAAGTATTCAACCAACTTAGCTACTAAGATTCTCCTGATATTGTATGTATTATGCCAATTTATTTCTGAGAAGTTAAAAATTCTTTTATTTTGATATTTTTTTTAAAAAAATTTATAGGCCGTTTGGGCTTTGGGAAATATTGCTGGTGACTCGCCCAAGTATCGTGACCTTGTGCTTGGCCATGGAGCTTTAGTGGCATTGCTGGCACAATTTAATGAGCAGGCAAAGCTATCTATGTTGAGAAATGCTACCTGGACATTGTCAAACTTT</genome_strand>
        <mrna_strand>CGTTATTATCGAGTTGAGTTCAGAATTTCGATTCACCGGAGCTATGTCACTGAGGCCGAACTCGAGAACGGAGGCTCGCCGGAGCAGGTACAAAGTTGCCGTAGATGCGGAGGAAGGACGGAGAAGAAGGGAAGATAACATGGTTGAGATCCGGAAGAATAAAAGAGAAGAGAATTTGCTTAAGAAGCGTCGTGAAGGTTTACTACAAGCTCAGCAGTTTCCTAGCACTGCTGCTGTTTCTCACCTTGATAAGAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGAGACTCTTCCTGAATTGATTGCTGGGGTTTGGTCTGATGACAGCAGTTTGCAACTTGAATGTACAACACAATTCCGGAAACTGCTTTCAATTG.............................................................................................................................AACGCAATCCTCCTATAGAGGAAGTGATACAGTCTGGGGTAGTTCCTCGCTTTGTTGAATTTCTTGCTCGAGATGACTATCATCAACTGCAGGTTTTTTTACAAAATCTATTATTTTTGTTTTTTGTTTTGCAGTT-CATCTTTATTTCTAATGTTCACATAATTGGCATCCTATAATCTAGTTTGAGGCAGCGTGGGCTCTTACAAATATTGCGTCTGGTACATCAGAAAACACTAAAGTTGTGATTGATTATGGTTCTGTCCCAATTTTCATCAGACTTCTAAGTTCACCAAGTGATGATGTCCGTGAACAG......................................................................................................................................................................................................................................................................................GCAGTTTGGGCTTTGGGAAATATTGCTGGTGACTCACCCAAGTATCGTGACCTTGTGCTTGGCCATGGAGCTTTAGCGGCATTGCTGGCACAATTTAATGAGCAGGCAAAGCTATCTATGTTGAGAAATGCTACCTGGACATTGTCAAACTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLe0045F21-xnYek/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U328746" ref_strand="+" ref_description="SGN-U328746        Tomato 200607 #1 [3 ESTs aligned] arabidopsis/peptide: | Symbol: None | myb family transcription factor, contains Pfam profile: PF00249 myb-like DNA binding domain; identical to cDNA putative transcription factor (At5g49330) GI:15420625 | chr5:20016178-20018604 REVERSE | Aliases: K21P3.23, K21P3_23(evalue: 2e-34, score=142) genbank/nr: gi|2921336|gb|AAC04718.1| MYB-like DNA-binding domain protein [Gossypium hirsutum] (evalue: 5e-35, score=151)">
      <seq>gggctgcaggattctggcacgagcaaaatgctgggttattaagatgtggaaaaagttgtagactcagatggattaattatttgaagagtgatttgaagagaggtaacataacctctgatgaagaagctataatcatcaagttacgtgcaactttgggtaacaggtggtctctgatagcagaacatttacctggtagaacagacaatgaaataaaaaactattggaattctcatttgagacgaaaggtggatagctttagaattccaggtgatgagaagctaccacaagcagttgttgaattagctaaaaaaggaacacaagtaaaacatattaccaaacgaggacgcagtagaagaaaaataattactagagtgtcaaattctacgaatgaaaatatcgagtttgatcatattgatgaccagatgttatggcatgacgatattgtgccgatggacgctaactatgaagtgctagatcaagattttattacaaattgtttatgggacgatcaaggagaaaatctcgaaataactgatgataatgataataataataataataatgaaatcttaagtgaggataattatggtaagtgggattgggaatatttaagtgaaatattgaataatgaaatatgtggaaatagtactaaagaaacagagcaaaataataataataataatatgtcattatgtgacattaatgacaatgtgcagaactgcatgaacaaagaagcaacacaagaaaatattgatcccatgcagagtgatttggtagcttggcttttgtcttaattttggaagtattacaattaaggagataatttatattatttattccacaaaaataaagatcaaattatgtatattactttctttttttttcttttcaaatttcatttatgagatgaaaatataatatgttattagtgtggtagaaatagactaggcatgtacagtggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLe0045F21-xnYek/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06SLe0045F21.1" temp_strand="-" temp_description="C06SLe0045F21.1  AC216658.1 htgs_phase:1 submitted_to_sgn_as:C06SLe0045F21 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="21369" stop="19743"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="21063" g_stop="20934" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="34" r_stop="163" r_length="130" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="20933" i_stop="20842" i_length="92">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20841" g_stop="20043" g_length="799"/>
          <reference_exon_boundary r_type="cDNA" r_start="164" r_stop="962" r_length="799" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLe0045F21.1" gen_strand="-" ref_id="SGN-U328746" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>929</cumulative_length_of_scored_exons>
        <coverage percentage="0.966" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLe0045F21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U328746" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="21063" e_stop="20934"/>
          <exon e_start="20841" e_stop="20043"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGTTATTAAGATGTGGAAAAAGTTGTAGACTCAGATGGATTAATTATTTGAAGAGTGATTTGAAGAGAGGTAACATAACCTCTGATGAAGAAGCTATAATCATCAAGTTACGTGCAACTTTGGGTAACAGGTTTGTTCGTTTTCATTAAACTTACAATTTTCTATTCACAATAAAAACTTAAATATAATTGTATAAATCTGAATGTTTAATTTGGTTTGCAGGTGGTCTCTGATAGCAGAACATTTACCTGGTAGAACAGACAATGAAATAAAAAACTATTGGAATTCTCATTTGAGACGAAAGGTGGATAGCTTTAGAATTCCAGGTGATGAGAAGCTACCACAAGCAGTTGTTGAATTAGCTAAAAAAGGAACACAAGTAAAACATATTACCAAACGAGGACGCAGTAGAAGAAAAATAATTACTAGAGTGTCAAATTCTACGAATGAAAATATCGAGTTTGATCATATTGATGACCAGATGTTATGGCATGACGATATTGTGCCGATGGACGCTAACTATGAAGTGCTAGATCAAGATTTTATTACAAATTGTTTATGGGACGATCAAGGAGAAAATCTCGAAATAACTGATGATAATGATAATAATAATAATAATAATGAAATCTTAAGTGAGGATAATTATGGTAAGTGGGATTGGGAATATTTAAGTGAAATATTGAATAATGAAATATGTGGAAATAGTACTAAAGAAACAGAGCAAAATAATAATAATAATAATATGTCATTATGTGACATTAATGACAATGTGCAGAACTGCATGAACAAAGAAGCAACACAAGAAAATATTGATCCCATGCAGAGTGATTTGGTAGCTTGGCTTTTGTCTTAATTTTGGAAGTATTACAATTAAGGAGATAATTTATATTATTTATTCCACAAAAATAAAGATCAAATTATGTATATTACTTTCTTTTTTTTTCTTTTCAAATTTCATTTATGAGATGAAAATATAATATGTTATTAGTGTGGTAGAAATAGACTAGGCATGTACAGTGGG</genome_strand>
        <mrna_strand>GGTTATTAAGATGTGGAAAAAGTTGTAGACTCAGATGGATTAATTATTTGAAGAGTGATTTGAAGAGAGGTAACATAACCTCTGATGAAGAAGCTATAATCATCAAGTTACGTGCAACTTTGGGTAACAG............................................................................................GTGGTCTCTGATAGCAGAACATTTACCTGGTAGAACAGACAATGAAATAAAAAACTATTGGAATTCTCATTTGAGACGAAAGGTGGATAGCTTTAGAATTCCAGGTGATGAGAAGCTACCACAAGCAGTTGTTGAATTAGCTAAAAAAGGAACACAAGTAAAACATATTACCAAACGAGGACGCAGTAGAAGAAAAATAATTACTAGAGTGTCAAATTCTACGAATGAAAATATCGAGTTTGATCATATTGATGACCAGATGTTATGGCATGACGATATTGTGCCGATGGACGCTAACTATGAAGTGCTAGATCAAGATTTTATTACAAATTGTTTATGGGACGATCAAGGAGAAAATCTCGAAATAACTGATGATAATGATAATAATAATAATAATAATGAAATCTTAAGTGAGGATAATTATGGTAAGTGGGATTGGGAATATTTAAGTGAAATATTGAATAATGAAATATGTGGAAATAGTACTAAAGAAACAGAGCAAAATAATAATAATAATAATATGTCATTATGTGACATTAATGACAATGTGCAGAACTGCATGAACAAAGAAGCAACACAAGAAAATATTGATCCCATGCAGAGTGATTTGGTAGCTTGGCTTTTGTCTTAATTTTGGAAGTATTACAATTAAGGAGATAATTTATATTATTTATTCCACAAAAATAAAGATCAAATTATGTATATTACTTTCTTTTTTTTTCTTTTCAAATTTCATTTATGAGATGAAAATATAATATGTTATTAGTGTGGTAGAAATAGACTAGGCATGTACAGTGGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLe0045F21-xnYek/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U335931" ref_strand="+" ref_description="SGN-U335931        Tomato 200607 #1 [1 ESTs aligned] genbank/nr: gi|47824972|gb|AAT38745.1| putative polyprotein, 3'-partial [Solanum demissum] (evalue: 1e-33, score=146)">
      <seq>acctagcccatctggtactaaggcggtgacacctccaccaactgaggaagtggtaagagagggtgaggatggggagaatgaacaagtgcagaatgaggaattgccaccccaacctacccaagagatgatcaatcaggttcttgcttaccttagcgggttatctgatcaaggccaagcacctccagtgttttctgcactagcacctcaggctccggaggtacaacatgcgcctactgtgactccccgcatcgatacctcattggaaataggaacgtttccccgtctgactacagggcctataatgacaaatgatcagcatgaactttttagtaagttcttgaaattgaaacctcaagtctacaagggtgttgaatctgaggatgcctacgattttctggttgactgtcatgagctactacacaagatgggtatagtagaacggtttggtgttgagtttgtgacttatcagtttcaagggaacgccaaaatgtggtggcggtcacatgttgagtgtcaaccaacagaggcaccacgtatgacttgggcatcattct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLe0045F21-xnYek/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06SLe0045F21.1" temp_strand="+" temp_description="C06SLe0045F21.1  AC216658.1 htgs_phase:1 submitted_to_sgn_as:C06SLe0045F21 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="33329" stop="34482"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33629" g_stop="34182" g_length="554"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="554" r_length="554" r_score="0.917"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLe0045F21.1" gen_strand="+" ref_id="SGN-U335931" ref_strand="+">
        <total_alignment_score>0.917</total_alignment_score>
        <cumulative_length_of_scored_exons>554</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLe0045F21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U335931" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33629" e_stop="34182"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACCTGGCCCATCTGGTACTAGGGCGGTGACTCCTCCACCGACTGAGGAAGTGTTAAGAGAGGGTGAGGAAGGGGAAAATGAGCAAGTGCAGAATGAGAAATTACCACCCCAACCTACCCCAGAGATGATTAATCAGGTTCTTGCTTATCTTAGCGGGTTATCTGATCAGGGCCAGACCCCTCCAGTGTTTTCTGCACCAGCACATCAGGTTACGGAGGTACCACATGCAGCTACTGTGGCTCCCTGCATGGATGCCTCATTGGGAATAGACACGTTTCCTCGGTTGACTACAGGGCCTATAATGACAAGTGATCAGCATGAACTTTTCAGTAAGTTCTTGAAATTGAAACCCCCAGTCTTCAAGGGTGCTGAATCTGAGGATGCCTATGATTTTCTAGTTGATTGTCATGAGCTACTACACAAGATGGGTATAGTAGAACGATTTGGCGTTGAGTTTGTGACTTATCAGTTTCAAGGGAACGCCAAAATGTGGTGGCGGTCACATGTTGAGTGTCAACCAACAGAGGCACCACCTATGACTTGGGCATCATTCT</genome_strand>
        <mrna_strand>ACCTAGCCCATCTGGTACTAAGGCGGTGACACCTCCACCAACTGAGGAAGTGGTAAGAGAGGGTGAGGATGGGGAGAATGAACAAGTGCAGAATGAGGAATTGCCACCCCAACCTACCCAAGAGATGATCAATCAGGTTCTTGCTTACCTTAGCGGGTTATCTGATCAAGGCCAAGCACCTCCAGTGTTTTCTGCACTAGCACCTCAGGCTCCGGAGGTACAACATGCGCCTACTGTGACTCCCCGCATCGATACCTCATTGGAAATAGGAACGTTTCCCCGTCTGACTACAGGGCCTATAATGACAAATGATCAGCATGAACTTTTTAGTAAGTTCTTGAAATTGAAACCTCAAGTCTACAAGGGTGTTGAATCTGAGGATGCCTACGATTTTCTGGTTGACTGTCATGAGCTACTACACAAGATGGGTATAGTAGAACGGTTTGGTGTTGAGTTTGTGACTTATCAGTTTCAAGGGAACGCCAAAATGTGGTGGCGGTCACATGTTGAGTGTCAACCAACAGAGGCACCACGTATGACTTGGGCATCATTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLe0045F21-xnYek/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U335937" ref_strand="+" ref_description="SGN-U335937        Tomato 200607 #1 [1 ESTs aligned] genbank/nr: beta-galactosidase(evalue: 3e-30, score=135)">
      <seq>gatctgtcccaggcttggctaacgtcacagttttagcattacaatccaagattgcaaaatttggagaaagccaagtcatacccagaattacatcaaaatcaaccatttctaagataaccaagtctacataagtattgctccccacaaaagtcaccagaccagacctatatactttttcaactatcacagactcacccaccggagtagaaacacgaataggcatgtcaagcaattcataatttaatttaagaccagtagcaaatgaggaagatacatatgaaaatgtggatccagggtcaaataatacaaaagccatgcaatcacaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLe0045F21-xnYek/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06SLe0045F21.1" temp_strand="-" temp_description="C06SLe0045F21.1  AC216658.1 htgs_phase:1 submitted_to_sgn_as:C06SLe0045F21 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="35610" stop="34680"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="35310" g_stop="34980" g_length="331"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="331" r_length="331" r_score="0.937"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLe0045F21.1" gen_strand="-" ref_id="SGN-U335937" ref_strand="+">
        <total_alignment_score>0.937</total_alignment_score>
        <cumulative_length_of_scored_exons>331</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLe0045F21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U335937" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="35310" e_stop="34980"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATCTGTCCCAGGCTTGGCTAACGTCACAGTTTTAGCATTACAATCCAAGATTGCAAAATTTGGAGAAAGCCAAGTCATACCCAGAATTACATCGAATTCAACCATTTCTAAGATAACCAAGTCTACATGAGTATTGCTCCCCACAAAAGTCACAAGACAAGACCTATACACCCTTTCAACTATCACAGACTCACCCACCGGAGTAGAAACACGAATAGACATGTCAAGCAATTCACAATGTAAGTAAAGACCATTAGCAAATCAGGAAGATACATAAGAAAATGTGGATCCAGGATCAAACAATACAGAAGCCATGCAATCACAAACCAA</genome_strand>
        <mrna_strand>GATCTGTCCCAGGCTTGGCTAACGTCACAGTTTTAGCATTACAATCCAAGATTGCAAAATTTGGAGAAAGCCAAGTCATACCCAGAATTACATCAAAATCAACCATTTCTAAGATAACCAAGTCTACATAAGTATTGCTCCCCACAAAAGTCACCAGACCAGACCTATATACTTTTTCAACTATCACAGACTCACCCACCGGAGTAGAAACACGAATAGGCATGTCAAGCAATTCATAATTTAATTTAAGACCAGTAGCAAATGAGGAAGATACATATGAAAATGTGGATCCAGGGTCAAATAATACAAAAGCCATGCAATCACAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLe0045F21-xnYek/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U335936" ref_strand="+" ref_description="SGN-U335936        Tomato 200607 #1 [1 ESTs aligned] genbank/nr: gi|49533772|gb|AAT66771.1| putative polyprotein [Solanum demissum] (evalue: 2e-62, score=215)">
      <seq>tttgatcctgcctccacattttcatatgtatcttcctcatttgctactgttcttaatttacatagtgaatcgcttgacatacctattcgtgttctactccggtgggtgagtctgtgattgttgaaaaggtgtataggtcttgtcttgtgacatttgtgggagcaatactcatgtagacttggttatcctataaatggttgacttcgatgtaattctgggtatgacttggctgtctccaaattttgcaatcttggattgtaatgctaaaactgtaacgttggccaagcctgagatagatgcgttagtgtgggagggtgactacacttccactccagttcgtatcatctcctttctttgtgctaagagaatggttagtaaagggtgtttagctttcttggcacacctcagggatgatactacccaagtaccttcaattgagtcagtttcgatagtccgtgagtttctggatgtgtttcctgcagaccttcctggtatgccaccggatagggatattgacttttgcattgatctggagccgggtgatcaccccatttccatacccccttatagaatggctcccgctgagttgggggagttaaaggcccaacttcaagagttgttangtaagggcttcattangccaagtgcatccccttggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLe0045F21-xnYek/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06SLe0045F21.1" temp_strand="+" temp_description="C06SLe0045F21.1  AC216658.1 htgs_phase:1 submitted_to_sgn_as:C06SLe0045F21 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="34710" stop="35949"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="35010" g_stop="35670" g_length="661"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="659" r_length="659" r_score="0.905"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLe0045F21.1" gen_strand="+" ref_id="SGN-U335936" ref_strand="+">
        <total_alignment_score>0.905</total_alignment_score>
        <cumulative_length_of_scored_exons>661</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLe0045F21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U335936" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="35010" e_stop="35670"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTGATCCTGGATCCACATTTTCTTATGTATCTTCCTGATTTGCTAATGGTCTTTACTTACATTGTGAATTGCTTGACATGTCTATTCGTGTTTCTACTCCGGTGGGTGAGTCTGTGATAGTTGAAAGGGTGTATAGGTCTTGTCTTGTGACTTTTGTGGGGAGCAATACTCATGTAGACTTGGTTATCTTAGAAATGGTTGAATTCGATGTAATTCTGGGTATGACTTGGCTTTCTCCAAATTTTGCAATCTTGGATTGTAATGCTAAAACTGTGACGTTAGCCAAGCCTGGGACAGATCCGTTAGTGTGGGAGGGTGACTACACTTCCAATCCGGTTTGTATCGTCTCCTTTCTTCGTGCTAAGAGAATGGTTAGTAAGGGTTGTTTAGCTTTCTTGGAACACCTCAAGGATGATACCACCCAAGTAATTTCAATTGAGTCGGTTTCGATAGTCCGCGAGTTTTTAGATGTGTTTCCTGCAGACCTTCCTGGTATGCCACCGGATAGAAATATTGACTTCTGCATCGATCTTGAACTGGGTACTCGCCCCATTTCTATACCCCCTTATAGAATGGCTCCCGCTGAGTTAAGGGAGTTAAAGGCCCAACTTCAAGAGTTGTTGAGCAAAGGCTTCATTAGATCAAGTACATCCCCTTGGG</genome_strand>
        <mrna_strand>TTTGATCCTGCCTCCACATTTTCATATGTATCTTCCTCATTTGCTACTGTTCTTAATTTACATAGTGAATCGCTTGACATACCTATTCGTGTT-CTACTCCGGTGGGTGAGTCTGTGATTGTTGAAAAGGTGTATAGGTCTTGTCTTGTGACATTTGT-GGGAGCAATACTCATGTAGACTTGGTTATCCTATAAATGGTTGACTTCGATGTAATTCTGGGTATGACTTGGCTGTCTCCAAATTTTGCAATCTTGGATTGTAATGCTAAAACTGTAACGTTGGCCAAGCCTGAGATAGATGCGTTAGTGTGGGAGGGTGACTACACTTCCACTCCAGTTCGTATCATCTCCTTTCTTTGTGCTAAGAGAATGGTTAGTAAAGGGTGTTTAGCTTTCTTGGCACACCTCAGGGATGATACTACCCAAGTACCTTCAATTGAGTCAGTTTCGATAGTCCGTGAGTTTCTGGATGTGTTTCCTGCAGACCTTCCTGGTATGCCACCGGATAGGGATATTGACTTTTGCATTGATCTGGAGCCGGGTGATCACCCCATTTCCATACCCCCTTATAGAATGGCTCCCGCTGAGTTGGGGGAGTTAAAGGCCCAACTTCAAGAGTTGTTANGTAAGGGCTTCATTANGCCAAGTGCATCCCCTTGGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLe0045F21-xnYek/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U331464" ref_strand="+" ref_description="SGN-U331464        Tomato 200607 #1 [2 ESTs aligned] arabidopsis/peptide: | Symbol: None | DNAJ heat shock N-terminal domain-containing protein, contains Pfam profiles PF00226: DnaJ domain, PF00515: TPR Domain; similar to GP:2104534:AF001308 (T10M13.11) | chr2:19476789-19478956 FORWARD | Aliases: T30B22.26(evalue: 2e-177, score=433) genbank/nr: tetratricopeptide(evalue: 0, score=442)">
      <seq>atgagtagagaggtctttacagagagagatatatattctggcgtggtttgccagcaatgaaacagaaggatcaaaagctctctgtttctctctctccaaagctggcactgtatattcacgcacttgctcaatattaatgtaaacagagataccattaaccaaatatcaagaaagttcgattcttgatccaacaatggctgcatctcctccatttcttgcctctgcagaaaaaaagccctggtgggttaccaacaaaaagattgtggaaagatatatcagagatgccaaaattcttatagccactcaagaaccaaatgagatttcttcagctcttgcccttgttgaagctgcgcttgcaatttctccgcgttttgaattagccctagagttaaaggctcgatctttgctttatttaaggtgttttaaggatgtagcttatatgctaaaagattatattcctagtctgaaaatgcctagtgatgacacatcatctacctcttcttctggttcatttgatagctcaaaggagcaaatcagcctcatttcttatggtgatgaacctaacttcaagtgcttctctatatcttatttgaagaagaaggttatggctagtctctacaagaattgcaataaagaaagtcaatggaggtatttggtcttaggacaagcttgttgccatttgggcctaatggaagacgcaatggttctgttacaaactggcaaacgccttgctacagatgcatttcgacgtgagagcatttgttggtctgaggatagcttctcgttttctaaatttccatctcaagcaaaaattgctgtacagctttgcaaattactgagtcagaaacaatatctcaacttctcagtcatatcaaactactcctacgacgaaaaactgctgcaattgcagctcttgatgctggtctttactcagaagctattaggcatttttcaaaaattgtggatggtcgtcgtggtgcccctcaggggtttatggctgaatgctatatgcatcgagcatcagcgtatcattcttctggtcgaattgcagaggcaatagctgattgcaatcgaacgctagcattggacccttcttgcattgatgctcttagaactagagctgcactatttgaaaccataagatgtttgcctgatagtcttcatgatttggagcacttaaaactcttgtacaattcaatgctacgggataggaaactaccaggaccaatatggaagcgtcaaaatgtggaatacagggagattccagggagactttgttccttggctacaaaaattcaagaattgaagaagagggttgcaaatggcggaacgggtaatgtggattactatgcattgattggtttaaactggggttgttcaagatcagaactggaaagagcacatttgttgctaactttaaggcacaagcctgacaaatcgacgagtttcatagaaaggtgtgaatttgcagatgaacaagatgtagattctgtaagggatagagcaaagatgtcagctttactgctctatagactgatacagaggggttatgctagtttgatggcgacaaccaaggacgaagaagcagctgagaagcagagaaagaaagctgctgctgcattgcaactgatgcagcaacaagttcagctaaatcaagaacaacaacaatcaagaagtgaaacttttggcacagttgtaatgcagcaacaagttcagaaaattcaagaacttcaacgatctgtacctgaaactcttgattcagatgtgtgcaatactgcattatgtagtaacacaaacattacaaatgcgacagtgttcaaaggggcgttctgcagagagcatgcgatagttgggaatatgttgtctcaagctggatttaatcaaccaattccagtgaaatatgaagcattgagttgttgaattttaggggattttagtaagagttctataacgaaaagagaatagtttgaaatgttatgccactgactcagcagaatctgaatctgctcctataccgacaaagattgtggtgagataactagtctcagattcaagccttggtatggaaaagaaatgttgggaccactgcctccttaaaagggccttacgcggcgtgaattcatattagccccaatgcatgtactggacactgggtgggataccaaaaaaagaaaagaactagcttcaatatcattgtacacatgaggaagaaaagtatttaccactgctagctgggaaaattttgtagttttacccatttgccaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLe0045F21-xnYek/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06SLe0045F21.1" temp_strand="+" temp_description="C06SLe0045F21.1  AC216658.1 htgs_phase:1 submitted_to_sgn_as:C06SLe0045F21 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="54606" stop="58200"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="54906" g_stop="55164" g_length="259"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="259" r_length="259" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="55165" i_stop="55790" i_length="626">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="55791" g_stop="56179" g_length="389"/>
          <reference_exon_boundary r_type="cDNA" r_start="260" r_stop="648" r_length="389" r_score="0.997"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="56180" i_stop="56284" i_length="105">
            <donor d_prob="0.997" d_score="0.98"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="56285" g_stop="57896" g_length="1612"/>
          <reference_exon_boundary r_type="cDNA" r_start="649" r_stop="2260" r_length="1612" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="2264" polyA_stop="2281"/>
      <MATCH_line gen_id="C06SLe0045F21.1" gen_strand="+" ref_id="SGN-U331464" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>2260</cumulative_length_of_scored_exons>
        <coverage percentage="0.991" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLe0045F21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U331464" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="54906" e_stop="55164"/>
          <exon e_start="55791" e_stop="56179"/>
          <exon e_start="56285" e_stop="57896"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGAGTAGAGAGGTCTTTACAGAGAGAGATATATATTCTGGCGTGGTTTGCCAGCAATGAAACAGAAGGATCAAAAGCTCTCTGTTTCTCTCTCTCCAAAGCTGGCACTGTATATTCACGCACTTGCTCAATATTAATGTAAACAGAGATACCATTAACCAAATATCAAGAAAGTTCGATTCTTGATCCAACAATGGCTGCATCTCCTCCATTTCTTGCCTCTGCAGAAAAAAAGCCCTGGTGGGTTACCAACAAAAAGGTACAATCTTGATTTTGATGATTGCATTTGCATATATACTTATATGCGAGTGAGTTCGATAGAATTCAGTAACTAGCTTTGGCTCAAACTTTGGAAAAATACATTCTTGAGCTAGAGCTTTGCTCATGGGTTCGATTGAATTTAGTAACTTTAGCTCATATTTTGTGTTTGAAAAACACATTCTTGATTTTATCCATTTTCGTTTCATTTACTTTCTTTGATGATTGCATTTGGATACATATGTGAGGGTGGAGCTAGACCTTTGTCTATGGGGTTTGGTAAAATGCAATGGCTTTAGCTTCAAACCATCTAATTGTGTTTAGAAGACACATTCTTGATTTGACCCTTTTTCATTGCATTCACTATAATTAGTTATAAAAGGGCGGAGGTATAGCTTCACTATGGGTTCAGCTGGCTCAAATCGCGTATTTGTGTTTAAAAAATGCATTCTTGATATTACCCGTGTTCATTTCATTCACTTTTGCTAGAGCTTCATCAATGGATTCAGCAGAATTTTGTTGCTTTGGCTCAAACAATGTATTTTTTAAGATGTGTCTTCTAGGATTCGCAACTCATAAACTCAAAATCCTAGACTCATACTTATGCTCTGTGTTTGTTTTTGTCAGATTGTGGAAAGATATATCAGAGATGCCAAAATTCTTATAGCCACTCAAGAACCAAATGAGATTTCTTCAGCTCTTGCCCTTGTTGAAGCTGCGCTTGCAATTTCTCCGCGTTTTGAATTAGCCCTAGAGTTAAAGGCTCGATCTTTGCTTTATTTAAGGTGTTTTAAGGATGTAGCTTATATGCTAAAAGATTATATTCCTAGTCTGAAAATGCCTAGTGATGACACATCATCTACCTCTTCTTCTGGTTCATTTGATAGCTCAAAGGAGCAAATCAGCCTCATTTCTTATGGTGATGAACCTAACTTCAAGTGCTTCTCTATATCTTATTTGAAGAAGAAGGTTATGGCTAGTCTCTACAAGAATTGCAATAAAGAAGGTCAATGGAGGTAAGCGCACTTCGAATTACTTGTTGTGTGATCGTCTCATTTAAAACTTGAAGTTTTTAGAGGGAACATGTGTTTAATTTCTTAATTACATTATGTCTTAAACAGGTATTTGGTCTTAGGACAAGCTTGTTGCCATTTGGGCCTAATGGAAGACGCAATGGTTCTGTTACAAACTGGCAAACGCCTTGCTACAGATGCATTTCGACGTGAGAGCATTTGTTGGTCTGAGGATAGCTTCTCGTTTTCTAAATTTCCAATCTCAAGCAAAAATTGCTGTACAGCTTTGCAAATTACTGAGTCAGAAACAATATCTCAACTTCTCAGTCATATCAAACTACTCCTACGACGAAAAACTGCTGCAATTGCAGCTCTTGATGCTGGTCTTTACTCAGAAGCTATTAGGCATTTTTCAAAAATTGTGGATGGTCGTCGTGGTGCCCCTCAGGGGTTTATGGCTGAATGCTATATGCATCGAGCATCAGCGTATCATTCTTCTGGTCGAATTGCAGAGGCAATAGCTGATTGCAATCGAACGCTAGCATTGGACCCTTCTTGCATTGATGCTCTTAGAACTAGAGCTGCACTATTTGAAACCATAAGATGTTTGCCTGATAGTCTTCATGATTTGGAGCACTTAAAACTCTTGTACAATTCAATGCTACGGGATAGGAAACTACCAGGACCAATATGGAAGCGTCAAAATGTGGAATACAGGGAGATTCCAGGGAGACTTTGTTCCTTGGCTACAAAAATTCAAGAATTGAAGAAGAGGGTTGCAAATGGCGAAACGGGTAATGTGGATTACTATGCATTGATTGGTTTAAACTGGGGTTGTTCAAGATCAGAACTGGAAAGAGCACATTTGTTGCTAACTTTAAGGCACAAGCCTGACAAATCGACGAGTTTCATAGAAAGGTGTGAATTTGCAGATGAACAAGATGTAGATTCTGTAAGGGATAGAGCAAAGATGTCAGCTTTACTGCTCTATAGACTGATACAGAGGGGTTATGCTAGTTTGATGGCGACAATCAAGGACGAAGAAGCAGCTGAGAAGCAGAGAAAGAAAGCTGCTGCTGCATTGCAACTGATGCAGCAACAAGTTCAGCTAAATCAAGAACAACAACAATCAAGAAGTGAAACTTTTGGCACAGTTGTAATGCAGCAACAAGTTCAGAAAATTCAAGAACTTCAACGATCTGTACCTGAAACTCTTGATTCAGATGTGTGCAATACTGCATTATGTAGTAACACAAACATTACAAATGCGACAGTGTTCAAAGGGGCGTTCTGCAGAGAGCATGCGATAGTTGGGAATATGTTGTCTCAAGCTGGATTTAATCAACCAATTCCAGTGAAATATGAAGCATTGAGTTGTTGAATTTTAGGGGATTTTAGTAAGAGTTCTATAACGAAAAGAGAATAGTTTGAAATGTTATGCCACTGACTCAGCAGAATCTGAATCTGCTCCTATACCGACAAAGATTGTGGTGAGATAACTAGTCTCAGATTCAAGCCTTGGTATGGAAAAGAAATGTTGGGACCACTGCCTCCTTAAAAGGGCCTTACGCGGCGTGAATTCATATTAGCCCCAATGCATGTACTGGACACTGGGTGGGATA-CAAAAAAAGAAAAGAACTAGCTTCAATATCATTGTACACATGAGGAAGAAAAGTATTTACCACTGCTAGCTGGGAAAATTTTGTAGTTTTACCCATTT</genome_strand>
        <mrna_strand>ATGAGTAGAGAGGTCTTTACAGAGAGAGATATATATTCTGGCGTGGTTTGCCAGCAATGAAACAGAAGGATCAAAAGCTCTCTGTTTCTCTCTCTCCAAAGCTGGCACTGTATATTCACGCACTTGCTCAATATTAATGTAAACAGAGATACCATTAACCAAATATCAAGAAAGTTCGATTCTTGATCCAACAATGGCTGCATCTCCTCCATTTCTTGCCTCTGCAGAAAAAAAGCCCTGGTGGGTTACCAACAAAAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGTGGAAAGATATATCAGAGATGCCAAAATTCTTATAGCCACTCAAGAACCAAATGAGATTTCTTCAGCTCTTGCCCTTGTTGAAGCTGCGCTTGCAATTTCTCCGCGTTTTGAATTAGCCCTAGAGTTAAAGGCTCGATCTTTGCTTTATTTAAGGTGTTTTAAGGATGTAGCTTATATGCTAAAAGATTATATTCCTAGTCTGAAAATGCCTAGTGATGACACATCATCTACCTCTTCTTCTGGTTCATTTGATAGCTCAAAGGAGCAAATCAGCCTCATTTCTTATGGTGATGAACCTAACTTCAAGTGCTTCTCTATATCTTATTTGAAGAAGAAGGTTATGGCTAGTCTCTACAAGAATTGCAATAAAGAAAGTCAATGGAG.........................................................................................................GTATTTGGTCTTAGGACAAGCTTGTTGCCATTTGGGCCTAATGGAAGACGCAATGGTTCTGTTACAAACTGGCAAACGCCTTGCTACAGATGCATTTCGACGTGAGAGCATTTGTTGGTCTGAGGATAGCTTCTCGTTTTCTAAATTTCC-ATCTCAAGCAAAAATTGCTGTACAGCTTTGCAAATTACTGAGTCAGAAACAATATCTCAACTTCTCAGTCATATCAAACTACTCCTACGACGAAAAACTGCTGCAATTGCAGCTCTTGATGCTGGTCTTTACTCAGAAGCTATTAGGCATTTTTCAAAAATTGTGGATGGTCGTCGTGGTGCCCCTCAGGGGTTTATGGCTGAATGCTATATGCATCGAGCATCAGCGTATCATTCTTCTGGTCGAATTGCAGAGGCAATAGCTGATTGCAATCGAACGCTAGCATTGGACCCTTCTTGCATTGATGCTCTTAGAACTAGAGCTGCACTATTTGAAACCATAAGATGTTTGCCTGATAGTCTTCATGATTTGGAGCACTTAAAACTCTTGTACAATTCAATGCTACGGGATAGGAAACTACCAGGACCAATATGGAAGCGTCAAAATGTGGAATACAGGGAGATTCCAGGGAGACTTTGTTCCTTGGCTACAAAAATTCAAGAATTGAAGAAGAGGGTTGCAAATGGCGGAACGGGTAATGTGGATTACTATGCATTGATTGGTTTAAACTGGGGTTGTTCAAGATCAGAACTGGAAAGAGCACATTTGTTGCTAACTTTAAGGCACAAGCCTGACAAATCGACGAGTTTCATAGAAAGGTGTGAATTTGCAGATGAACAAGATGTAGATTCTGTAAGGGATAGAGCAAAGATGTCAGCTTTACTGCTCTATAGACTGATACAGAGGGGTTATGCTAGTTTGATGGCGACAACCAAGGACGAAGAAGCAGCTGAGAAGCAGAGAAAGAAAGCTGCTGCTGCATTGCAACTGATGCAGCAACAAGTTCAGCTAAATCAAGAACAACAACAATCAAGAAGTGAAACTTTTGGCACAGTTGTAATGCAGCAACAAGTTCAGAAAATTCAAGAACTTCAACGATCTGTACCTGAAACTCTTGATTCAGATGTGTGCAATACTGCATTATGTAGTAACACAAACATTACAAATGCGACAGTGTTCAAAGGGGCGTTCTGCAGAGAGCATGCGATAGTTGGGAATATGTTGTCTCAAGCTGGATTTAATCAACCAATTCCAGTGAAATATGAAGCATTGAGTTGTTGAATTTTAGGGGATTTTAGTAAGAGTTCTATAACGAAAAGAGAATAGTTTGAAATGTTATGCCACTGACTCAGCAGAATCTGAATCTGCTCCTATACCGACAAAGATTGTGGTGAGATAACTAGTCTCAGATTCAAGCCTTGGTATGGAAAAGAAATGTTGGGACCACTGCCTCCTTAAAAGGGCCTTACGCGGCGTGAATTCATATTAGCCCCAATGCATGTACTGGACACTGGGTGGGATACCAAAAAAAGAAAAGAACTAGCTTCAATATCATTGTACACATGAGGAAGAAAAGTATTTACCACTGCTAGCTGGGAAAATTTTGTAGTTTTACCCATTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLe0045F21-xnYek/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U320769" ref_strand="+" ref_description="SGN-U320769        Tomato 200607 #1 [9 ESTs aligned] arabidopsis/peptide: AT4G02080.1 | Symbol: ATSAR2 | GTP-binding protein (SAR1A), identical to SP:O04834 GTP-binding protein SAR1A. (Arabidopsis thaliana) | chr4:921462-922776 FORWARD | Aliases: T10M13.9, T10M13_9, ATSARA1C, ATSAR2 (evalue: 8e-76, score=280) genbank/nr: gi|1616612|emb|CAA69699.1| small GTP-binding protein [Nicotiana plumbaginifolia] (evalue: 2e-78, score=295)">
      <seq>tcgtgccgaattcggcacgaggagagaactagtctcgagtttcaatttcattttcccattttgcttcacctaaaccctaatcaattctttaatcattttgatttctaagtttaacaattaattaccccacataaacaaccccaagatctgatttttattttttttttgaaaaagagtgcattaaaatccagatctttcttgaatttgaaaaaaaaatgtttttgtgggattggttttatggagttttgtcatctctaggtttgtggcaaaaggaagctaagatcttattcttaggtcttgacaatgctggcaaaaccactcttcttcatatgctcaaagatgagaggctagttcagcatcaaccaacgcagtatcctacatctgaagagttgagtattggaaagataaagttcaaagctttcgacttgggaggtcatcagattgctcgtcgggtctggaaagactactatgccaaggttgatgcagttgtgtacctagttgatgcatatgacaaagagcgctttgctgagtcaaaaaaggaacttgacgcgcttctttctgatgaagcccttgctactgtccccttcctcattttgggaaacaagatagacataccatatgcagcttcagaagatgaactgcgttatcaccttggcttgaccggtgtcacaactggcaaaggtaaggtgaatcttgctgattctaccgttcgtcctttggaggtatttatgtgcagtattgtacggaaaatgggttatggcgatggatttaagtgggtatctcaatatataaagtaggttatgccatagaagttgaaagaagtggcgtcctggttatgctgtagatcagcatttttggaaaaagattggtttcaccagatacttattcatttgttttcgaattgatcagtcagtcttctataactattttgtatcctctggtatctatgtagtttgatgagaatatacttttgtttgtgtaacatttacatgtagctggaaatttctatctacatattcttgacttatatttttcttttttccaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLe0045F21-xnYek/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06SLe0045F21.1" temp_strand="-" temp_description="C06SLe0045F21.1  AC216658.1 htgs_phase:1 submitted_to_sgn_as:C06SLe0045F21 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="63073" stop="57976"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62771" g_stop="62467" g_length="305"/>
          <reference_exon_boundary r_type="cDNA" r_start="40" r_stop="344" r_length="305" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="62466" i_stop="61676" i_length="791">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="61675" g_stop="61544" g_length="132"/>
          <reference_exon_boundary r_type="cDNA" r_start="345" r_stop="476" r_length="132" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="61543" i_stop="58848" i_length="2696">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="58847" g_stop="58266" g_length="582"/>
          <reference_exon_boundary r_type="cDNA" r_start="477" r_stop="1058" r_length="582" r_score="0.985"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLe0045F21.1" gen_strand="-" ref_id="SGN-U320769" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>1019</cumulative_length_of_scored_exons>
        <coverage percentage="0.963" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLe0045F21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U320769" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="62771" e_stop="62467"/>
          <exon e_start="61675" e_stop="61544"/>
          <exon e_start="58847" e_stop="58266"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCAATTTCATTTTCCCATTTTGCTTCACCTAAACCCTAATCAATTCTTTAATCATTTTGATTTCTAAGTTTAACAATTAATTACCCCACATAAACAACCCCAAGATCTGATTTTTATTTTTTTTTTGAAAAAGAGTGCATTAAAATCCAGATCTTTCTTGAATTTGAAAAAAAAATGTTTTTGTGGGATTGGTTTTATGGAGTTTTGTCATCTCTAGGTTTGTGGCAAAAGGAAGCTAAGATCTTATTCTTAGGTCTTGACAATGCTGGCAAAACCACTCTTCTTCATATGCTCAAAGATGAGGTACTATTAATTCCCTTTTATTCGGTTTGATACGGAGTTTAAGAAAGAAAAGATGTAATTTTGAAATATGTAGGTTAAATTGTTTGGGATTATATAGGTTATGTTGTTGTTGTTATATGGTTTAAATTGTTTCTAAATGTAGAAAGGTAGCAATTTGTTTTTAGGGACAGACTAAAAAAGGAAGTGCATCACATCAATTTAAGAGGGATGTAAGAATTATGTTATGTTTATTTGATCGGGCACGAAGTTTAAGAAAAATGGTAAATCATCGATTATATTGTTTCTAAATACAGAAAGTTACTAAAAGAGAAAGTGCATCTCATCAATTTGAGAGGGAGGAGGAATTATGTTATGTTGTTTGACTGAACACGAAGTTTGAGAAAGAAAAAAATGTACTTTTGAAATATGTAAAGCATGGTGGTTGAATTGTTCCTAAATGTAGAAAGTTAGCAATTTATTTTCCCAGTCAAACTTAAAAAGAAAGTACATTACATCAATTTGAGAGAGACGGAGGAATTATGTCATGTTGCTTGATGCGCATGGAGTTTAAAAAAAAAGATTTGAAACTTGTGAATCATCTTATTAATGGCTTAGTTGCTTTTAAATGTAGAAAGGTAGCATTTTTGGGGGGAACAGACTAAAAAAGAAATTTGAGATGGATTGAGTAATTATAATGAATGTTGAGAAAACATGAATCAAGTGGAAATGAGCAATGGGTGATTAGGATTCATATTGTGTATAGTTGATTTATCATAAAAGCATCGTCTTTGATTGTTTTTCGGTATTTACAGAGGCTAGTTCAGCATCAACCAACGCAGTATCCTACATCTGAAGAGTTGAGTATTGGAAAGATAAAGTTCAAAGCTTTCGACTTGGGAGGTCATCAGATTGCTCGTCGGGTCTGGAAAGACTACTATGCCAAGGTATGCCTTGTGTGTTAAATGTTGATAACCTTTTATTTCTGTAATTTTAATTTTGCACATAGGTAGAACTTGTCTTGCCCATTTTGTTGCATCATTTTATTCTCCGCATTTTCTTGTGTTGGTCACTGAAAAGTTTCGCGGATTGTGTTGAATCTTTCTGTCAGATTAGATATATATCAATAACTGAATTTTGTAACCTGATCATCTTTTACGTTTTAATAAAAAGAAATAATCTCTTTTAGTCTAATCCAAAAGTAAAAAAAACTCAAAATTGCCTTTTATATCAACTGTACTGGATGTTTAAGTCAGTTGCCATGTGTTGCATCAGATCCATGTGTTCTATAATCGAATAGTATAACGAAGGGCATATACTAACAATATTTTGAAAGTACTGGGGTAAATGTGACGCTTTTTCCGTAATACTTTTGTTATTGTTCTGCCCTACTGGGCCAGATTCCTTGACACTTCCCTATTTTTTCCTTCGTTTATATGACTTGTGTTTCTCTTCGATGACCATGATGGCTTAGTACAGCCTCTAGATTGGCTGTCCCTTGCAGCAACATGAAAACATTAATGTGCTTCATTGGTGGCACTTATCTCTGTAAGGTATGTGCTTAGAAAGTATTTGTGTGGAGAATTAAATTTACTGAAGGTGTAGTGGGCTATTCGTTTGTCAAATTTGTCGAAGTCGTATGTTTGAATGCAGCAGTTTTTTAAGGAAAATAATTCAGATTTTTTTTTGAAATGGTAAGCATTGTTGATTTCATAAAAGACAAAACAACACGAAGTAGTGCTGAAATAACATCCGAAAAGGAGGGAAAGGGTGAGAATAGAATTAAAAGAACTCTCAGGGAAGAAACTAAGCTTACAAAAGATTCTATCATCTGTAGCAAGCGGTTTCAACATCATCTACCACTGATTTACCCATTGAAGTATTTGATTTGTCTTAGATTTGCCTTCTGTTTATCTTTCAGTCCACGGAAATCCCCATACTGCTAATTTAGTCCCATACTCGCCCTTTTTCTAACGATTGTCCAGCTTAGCTCTGACATTTATTACAATGGACGTAGGCAAACTAAAAATTCAAATTTATGCTCAAATTGACTTTTTAAAGTCAATCTGAGTTAGAGATCCTTGAAATATTTACACACTTCTATTTTGGATAATGCTCTTGCACCTTAATTATTTCAACGAGTACCTTGTTACCTATCACCTACACAAGTACCGGTTCACTCTGCCCACCAAGAGTTAGGCAAATGGGAAGAATCACTTGGCGGTTTTCTGTCTGTATGGAGATTTGAACCCCGGTCTCCTAGGTTTTCACCCACTTTGTTGAGTCATTGATCAGTAGGCCACACACTTGGGTGACTGTTTTCATACCTATCACTCCGTTTGTCCAAACTTTTGTGACACTTCCTTTTTATTTTTTGTGCTAAGCATGACACCTTCTCTTTTTTGGAAACTATTAAATTTAAGTATCCTCATTTTAGTCTCCCAAGGAGTTGTTGGGACACTACCACCGCTCATGTAAACACAAAATACATGTGGAACCCTCACCACCGCTCTGTTAAAGGGATAATTTTGGTGCTTTGCTTATATTTGGCTTACATGATAAAAGTCATCTTTAATTGAAAATTTCATATCCAGTTAAACACCGTCACGTGAATTGATACGGAGGGAGTAGATGATATGGGAAGGAAATGATAAGTTAAAAAGCAAATTCATTTAGTTTTACCTAAATTTATTTTCACCATAAAAGACTCCAGTTTTTCTTCACAAATTGCTTTGTACACTTGCCAATTTTTAAAGGAAAATCATAGCATGAGAGCAATGATAGTTGGTTTCCCCAAGGTTGAAATTATTATTTCCTGATTAAGGTCTCTTTTGTCCCTTTTCCCTCAAGGTTACAAGTTTGGCTTCATGATATTCTTCCATCTTTGATTTTGGTCTTGATTGCTTTATAGTCTAATGTCGGCCTAACAGCCTAACTGTACCAACATTTTTTTCGTGTTTTTTTCTTGGGAGTTGGGTGATCAGATAGCACAGCAAATCATGACTATTCTTAGACAAGTTGTGCTTAATCTCACGAAACACCAAATTGACTCGTTACGATCCACATTTTAATGTACCTTTTACTCTATTTCAAAAAATCTGCCTTAATAAACAAAGAAAGGACAAAAGTTCCTCATGCATAATGTTTTGTCCCCTCTTTTGATAAATTATAATGTTTTAGTCCCTCAACAGTTAGAAAATTACCTTTTTCTATATTCATTTATTTTATGGTTGTGGATAAAAGTGCCCCTAAAGTGTCAGTAGGACATAGGTTGTTCTGATGGTTAGACTTTTTATCCCGGGGAAGTAGGGAGCATATGCTGAAGACCAGATGGAAGCTTAGGACTGAAGGAGTCACAAATTACTGATCAGGGACTAAATTGCTCGTCTTATGAAAACATTACCTACTCCAGCAAAGTTCCTTTCTCCACCCCTTCCCTGGAGTTCATCCCAGTAGTTTGTTACAAGGTTGCAATCTTTTCTTTTCTATTTTAAGCTGTGCAGTGTAAGGTACTAAATAATTTCTTATTAGTGTAAAGTTTGCGCCTTCTGTTTTCCTTATTTCCTTCTTTTCCGGTGACTATTGATCTGGCCAATGAGTTCCCGTAGTTTTGTGTCAAGTGGCTTGAATTGCTGTGCCACAGGTTGATGCAGTTGTGTACCTAGTTGATGCATATGACAAAGAGCGCTTTGCTGAGTCAAAAAAGGAACTTGACGCGCTTCTTTCTGATGAAGCCCTTGCTACTGTCCCCTTCCTCATTTTGGGAAACAAGATAGACATACCATATGCAGCTTCAGAAGATGAACTGCGTTATCACCTTGGCTTGACCGGTGTCACAACTGGCAAAGGTAAGGTGAATCTTGCTGATTCTACCGTTCGTCCTTTGGAGGTATTTATGTGCAGTATTGTACGGAAAATGGGTTATGGCGATGGATTTAAGTGGGTATCTCAATATATAAAGTAGGTTATGCCATAGAAGTTGAAAGAAGTGGCGTCCTGGTTATGCTGTAGATCAGCATTTTTGGAAAAAGATTGGTTTCACCAGATACTTATTCATTTGTTTTCGAATTGATCAGTCAGTCTTCTATAACTATTTTGTATCCTCTGGTATCTATGTAGTTTGATGAGAATATACTTTTGTTTGTGTAACATTTACATGTAGCTGGAAATTTCTATCTACATATTCTTGACTTATATTTTTCTTTTTTCCATATATTGTTCAAAT</genome_strand>
        <mrna_strand>TTTCAATTTCATTTTCCCATTTTGCTTCACCTAAACCCTAATCAATTCTTTAATCATTTTGATTTCTAAGTTTAACAATTAATTACCCCACATAAACAACCCCAAGATCTGATTTTTATTTTTTTTTTGAAAAAGAGTGCATTAAAATCCAGATCTTTCTTGAATTTGAAAAAAAAATGTTTTTGTGGGATTGGTTTTATGGAGTTTTGTCATCTCTAGGTTTGTGGCAAAAGGAAGCTAAGATCTTATTCTTAGGTCTTGACAATGCTGGCAAAACCACTCTTCTTCATATGCTCAAAGATGAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGCTAGTTCAGCATCAACCAACGCAGTATCCTACATCTGAAGAGTTGAGTATTGGAAAGATAAAGTTCAAAGCTTTCGACTTGGGAGGTCATCAGATTGCTCGTCGGGTCTGGAAAGACTACTATGCCAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGATGCAGTTGTGTACCTAGTTGATGCATATGACAAAGAGCGCTTTGCTGAGTCAAAAAAGGAACTTGACGCGCTTCTTTCTGATGAAGCCCTTGCTACTGTCCCCTTCCTCATTTTGGGAAACAAGATAGACATACCATATGCAGCTTCAGAAGATGAACTGCGTTATCACCTTGGCTTGACCGGTGTCACAACTGGCAAAGGTAAGGTGAATCTTGCTGATTCTACCGTTCGTCCTTTGGAGGTATTTATGTGCAGTATTGTACGGAAAATGGGTTATGGCGATGGATTTAAGTGGGTATCTCAATATATAAAGTAGGTTATGCCATAGAAGTTGAAAGAAGTGGCGTCCTGGTTATGCTGTAGATCAGCATTTTTGGAAAAAGATTGGTTTCACCAGATACTTATTCATTTGTTTTCGAATTGATCAGTCAGTCTTCTATAACTATTTTGTATCCTCTGGTATCTATGTAGTTTGATGAGAATATACTTTTGTTTGTGTAACATTTACATGTAGCTGGAAATTTCTATCTACATATTCTTGACTTATATTTTTCTTTTTTCCAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLe0045F21-xnYek/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U337214" ref_strand="+" ref_description="SGN-U337214        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: AT4G02080.1 | Symbol: ATSAR2 | GTP-binding protein (SAR1A), identical to SP:O04834 GTP-binding protein SAR1A. (Arabidopsis thaliana) | chr4:921462-922776 FORWARD | Aliases: T10M13.9, T10M13_9, ATSARA1C, ATSAR2 (evalue: 3e-65, score=245) genbank/nr: gi|77416955|gb|ABA81873.1| NtSar1 protein-like [Solanum tuberosum] (evalue: 1e-67, score=259)">
      <seq>aaaaatgtttctgaggcattggttatatggacctctgccatctctacgtttgtggcaaaaggaacctaagatcttattcttaggtcttgacaatgctggcaaaaccactcttcttcatatgctcaaagatgagaagctagttcagcatcaaccaacgcaatatcctacatctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLe0045F21-xnYek/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06SLe0045F21.1" temp_strand="-" temp_description="C06SLe0045F21.1  AC216658.1 htgs_phase:1 submitted_to_sgn_as:C06SLe0045F21 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="62899" stop="61336"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62599" g_stop="62467" g_length="133"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="133" r_length="133" r_score="0.925"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="62466" i_stop="61676" i_length="791">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="0.95"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="61675" g_stop="61636" g_length="40"/>
          <reference_exon_boundary r_type="cDNA" r_start="134" r_stop="173" r_length="40" r_score="0.950"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLe0045F21.1" gen_strand="-" ref_id="SGN-U337214" ref_strand="+">
        <total_alignment_score>0.925</total_alignment_score>
        <cumulative_length_of_scored_exons>173</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLe0045F21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U337214" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="62599" e_stop="62467"/>
          <exon e_start="61675" e_stop="61636"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAATGTTTTTGTGGGATTGGTTTTATGGAGTTTTGTCATCTCTAGGTTTGTGGCAAAAGGAAGCTAAGATCTTATTCTTAGGTCTTGACAATGCTGGCAAAACCACTCTTCTTCATATGCTCAAAGATGAGGTACTATTAATTCCCTTTTATTCGGTTTGATACGGAGTTTAAGAAAGAAAAGATGTAATTTTGAAATATGTAGGTTAAATTGTTTGGGATTATATAGGTTATGTTGTTGTTGTTATATGGTTTAAATTGTTTCTAAATGTAGAAAGGTAGCAATTTGTTTTTAGGGACAGACTAAAAAAGGAAGTGCATCACATCAATTTAAGAGGGATGTAAGAATTATGTTATGTTTATTTGATCGGGCACGAAGTTTAAGAAAAATGGTAAATCATCGATTATATTGTTTCTAAATACAGAAAGTTACTAAAAGAGAAAGTGCATCTCATCAATTTGAGAGGGAGGAGGAATTATGTTATGTTGTTTGACTGAACACGAAGTTTGAGAAAGAAAAAAATGTACTTTTGAAATATGTAAAGCATGGTGGTTGAATTGTTCCTAAATGTAGAAAGTTAGCAATTTATTTTCCCAGTCAAACTTAAAAAGAAAGTACATTACATCAATTTGAGAGAGACGGAGGAATTATGTCATGTTGCTTGATGCGCATGGAGTTTAAAAAAAAAGATTTGAAACTTGTGAATCATCTTATTAATGGCTTAGTTGCTTTTAAATGTAGAAAGGTAGCATTTTTGGGGGGAACAGACTAAAAAAGAAATTTGAGATGGATTGAGTAATTATAATGAATGTTGAGAAAACATGAATCAAGTGGAAATGAGCAATGGGTGATTAGGATTCATATTGTGTATAGTTGATTTATCATAAAAGCATCGTCTTTGATTGTTTTTCGGTATTTACAGAGGCTAGTTCAGCATCAACCAACGCAGTATCCTACATCTG</genome_strand>
        <mrna_strand>AAAAATGTTTCTGAGGCATTGGTTATATGGACCTCTGCCATCTCTACGTTTGTGGCAAAAGGAACCTAAGATCTTATTCTTAGGTCTTGACAATGCTGGCAAAACCACTCTTCTTCATATGCTCAAAGATGAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCTAGTTCAGCATCAACCAACGCAATATCCTACATCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLe0045F21-xnYek/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U320229" ref_strand="+" ref_description="SGN-U320229        Tomato 200607 #1 [12 ESTs aligned] arabidopsis/peptide: | Symbol: None | expressed protein, similar to expressed protein [Arabidopsis thaliana] (TAIR:At1g21170.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:AAR07074.1) | chr4:892176-897318 FORWARD | Aliases: T10M13.4, T10M13_4(evalue: 1e-142, score=503) genbank/nr: unknown(evalue: 1e-140, score=503)">
      <seq>taaaatgcactttgaatccacccagcagcacatcaagaaacaacttgcttcttctgatcttgttgccatgttaaggattatttggactgacgtgcttctcatggatggagtgttgcctgaggctggtctgcgtgatattaccatggaggctgctcatgttgccgttaaacagtacgttgctagcagatttagccatcttctacttgatatttcaggtgctgtcgtcaaagtgggtaatcaaatggagggtattgaagaaaaaaattctttgcaggccatccttgaggccagtaaaaaggcagtagtgcaaggcagtatggatgtcttacaggatttccgtcaacttcttgatgaaaacttggaactgctttctaagttgagagatttggttattgactgggtacaagaaggatttcaggacttcttcaggaaacttaatgatcattttttcttactttctggaaagaaaaatccagccggtcaagatctaagctttcatgagggaatacagagagacaaaatacttcctgggcttgttcttgtgctcgttcaactctctgtttttgttgagcaaaatgccattcccagaattaccgaggaaattgcctcatctttctctggtggtgggtctcggggctatgaaaatggtccagcttttgttcctgcagaaatttgtcgcaccttcagagcagctggtgaaaaattcttgcagcattatattaacatgagaactcagaagatatcatttgtcttgaataaaaggtttacaacgccaaattgggtcaagcataaagagcccagagaagttcatatgtttgttgatctgcttcttcaagagctagatagtatcattaaagaagtaaagaatatgttgcctgaagggatccagcgtaagcatcgccgttctgacagcagtgggagcaccatttcctcccgtagtaatccattaagagatgacagaatggtacggtcaaatacccagcaggcgagaagtcaactccttgagtcccatttggcgaaattgtttaagcagaagatggaaattttcacaaaagttgaacatacacaggactcagtaataactactatcgtgaaactttgcttgaagagtttacaagaatttgtccgacttcagacttttaaccgtagtggatttcaacaaattcagctggacatccattttcttaaaactactctgaaggacactgccgatgatgaagctgctgttgattttttgcttgatgaggtaattgttgctgctgctgagcgatgtcttgatccaattcctctggaaccttctatcctggacaggcttacccaagcaaagctggcaaaggctcgggagcagagtcctacctcataacaattatggtggcgttgtgaccattgagcttgccatgatctgaaaacgttcacgagatgctggcttacatgccaagtactatatcggaaatatcagatccatgaaaaccttctgtaaggtgtgtatataaccattatccatctccggctaccatttcctaaacgactttcagtttccctccgagtaccttcagttttcccaaatcctgaagaggtattgttttgctggaaactaaaggggaaacgaaaaactcttgtattgaaactagacagttgagtgtaatgaatgttgtttcctccccctttgtgttaatatataatgacatcttctaataaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLe0045F21-xnYek/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06SLe0045F21.1" temp_strand="-" temp_description="C06SLe0045F21.1  AC216658.1 htgs_phase:1 submitted_to_sgn_as:C06SLe0045F21 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="72639" stop="53309"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="72451" g_stop="72446" g_length="6"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="6" r_length="6" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="72445" i_stop="72338" i_length="108">
            <donor d_prob="0.918" d_score="0.00"/>
            <acceptor a_prob="0.928" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="72337" g_stop="72270" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="7" r_stop="74" r_length="68" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="72269" i_stop="71955" i_length="315">
            <donor d_prob="0.958" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="71954" g_stop="71881" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="75" r_stop="148" r_length="74" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="71880" i_stop="71803" i_length="78">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="71802" g_stop="71736" g_length="67"/>
          <reference_exon_boundary r_type="cDNA" r_start="149" r_stop="215" r_length="67" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="71735" i_stop="71157" i_length="579">
            <donor d_prob="0.965" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="71156" g_stop="71041" g_length="116"/>
          <reference_exon_boundary r_type="cDNA" r_start="216" r_stop="331" r_length="116" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="71040" i_stop="70074" i_length="967">
            <donor d_prob="0.907" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="70073" g_stop="69807" g_length="267"/>
          <reference_exon_boundary r_type="cDNA" r_start="332" r_stop="598" r_length="267" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="69806" i_stop="69720" i_length="87">
            <donor d_prob="0.612" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="69719" g_stop="69603" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="599" r_stop="715" r_length="117" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="69602" i_stop="68827" i_length="776">
            <donor d_prob="0.982" d_score="1.00"/>
            <acceptor a_prob="0.143" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="68826" g_stop="68755" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="716" r_stop="787" r_length="72" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="68754" i_stop="68661" i_length="94">
            <donor d_prob="0.603" d_score="1.00"/>
            <acceptor a_prob="0.968" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="68660" g_stop="68610" g_length="51"/>
          <reference_exon_boundary r_type="cDNA" r_start="788" r_stop="838" r_length="51" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="68609" i_stop="68471" i_length="139">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="68470" g_stop="68240" g_length="231"/>
          <reference_exon_boundary r_type="cDNA" r_start="839" r_stop="1069" r_length="231" r_score="1.000"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="68239" i_stop="68161" i_length="79">
            <donor d_prob="0.406" d_score="1.00"/>
            <acceptor a_prob="0.959" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="68160" g_stop="67984" g_length="177"/>
          <reference_exon_boundary r_type="cDNA" r_start="1070" r_stop="1246" r_length="177" r_score="1.000"/>
        </exon>
        <intron i_serial="11">
          <gDNA_intron_boundary i_start="67983" i_stop="67755" i_length="229">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="12">
          <gDNA_exon_boundary g_start="67754" g_stop="67305" g_length="450"/>
          <reference_exon_boundary r_type="cDNA" r_start="1247" r_stop="1696" r_length="450" r_score="1.000"/>
        </exon>
        <intron i_serial="12">
          <gDNA_intron_boundary i_start="67304" i_stop="67020" i_length="285">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.748" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="13">
          <gDNA_exon_boundary g_start="67019" g_stop="66998" g_length="22"/>
          <reference_exon_boundary r_type="cDNA" r_start="1697" r_stop="1718" r_length="22" r_score="0.636"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLe0045F21.1" gen_strand="-" ref_id="SGN-U320229" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>1718</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLe0045F21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U320229" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="72451" e_stop="72446"/>
          <exon e_start="72337" e_stop="72270"/>
          <exon e_start="71954" e_stop="71881"/>
          <exon e_start="71802" e_stop="71736"/>
          <exon e_start="71156" e_stop="71041"/>
          <exon e_start="70073" e_stop="69807"/>
          <exon e_start="69719" e_stop="69603"/>
          <exon e_start="68826" e_stop="68755"/>
          <exon e_start="68660" e_stop="68610"/>
          <exon e_start="68470" e_stop="68240"/>
          <exon e_start="68160" e_stop="67984"/>
          <exon e_start="67754" e_stop="67305"/>
          <exon e_start="67019" e_stop="66998"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAAAATGTGCGCACTTCTTATTCACCACATCCCTTTCTTGGTGAATCTGATTTTTTTTTTCTCATTATCATTTGTGCTTAATATTTTTGCACCTGTGATTACTACCAAATTCAGGCACTTTGAATCCACCCAGCAGCACATCAAGAAACAACTTGCTTCTTCTGATCTTGTTGCCATGTTAAGTAAGTTTAATGACCATTCACCTCATGGACATTGAAAAATGGGCTTCTATTTTATTTTGCTTATTCAACTTTAATTTTGCATTTTCAACTGCATCTCCTTAACTCCTTTATTTGGACTTCGTTTTCTTATTTACCTTATGTTCAATATGACTGATTGTTTTGTTTAGTTTCAGTCTTGCTTGTTCATTAAGCTTTCTTCTGCTTTCCAAAATCTCAAGTTTACTATTTCTATAACCATGCTTTTCATGGATAACACTTGTGTTGGAACACTGTAATGATGACTGATTGTATCTTATGGCACTCATATTTCATCAGGGATTATTTGGACTGACGTGCTTCTCATGGATGGAGTGTTGCCTGAGGCTGGTCTGCGTGATATTACCATGGAGGTTGCATATAAAAGACATTTAGCTCTTATTAGTCTGTAATGCTCGATTGTCATTGATGTACTGACTCTGTCATTTCAGGCTGCTCATGTTGCCGTTAAACAGTACGTTGCTAGCAGATTTAGCCATCTTCTACTTGATATTTCAGGTTTGTACTGTTAAATCAAAATAATAGATAACATGTAAATTAAAAATGAAAAAAGAAGAAGATACAGTAGCAATACAAAAAGATATGTAACAGATTAGTTAAGAGATATAAAGATATCTCTAAGGAGGATGTGCAAACCAACAAACCTCTGATTTTCATCAACTGAAAAAGAAAAAAAAGAACCTATTCTTTCTCAAAAATAAATTAAATAAAAAGAATTTACCGATTCCCGGAAATTGAAATGCAGAACCAGCTTTCTGTCCCTTTTTCACGAAGAACCTACTCTATCTGCCTAAAAGGTAAGATTCTTCAAAGAACAGCTCAAAATGGGTCCAACTTATCTTTTGTCTTTAAAAGGAAATAAAACTGAAATATTTGTACATTTCGCTCCATGTAAGATCCAAAGCTCAGTGTATAGTCCATATTAACTTTCTTATATTTTTCTCAATACAAATGAGTAACCTTGAGAAAAATAAACTCTTTATATCAATACAATGACCTTAATATTGAAACCACATATGTTGCACGAGTTCTAATGCATTTTGATCTTGGCTATTTTTTGTTCTTTTGAATTGTCAGGTGCTGTCGTCAAAGTGGGTAATCAAATGGAGGGTATTGAAGAAAAAAATTCTTTGCAGGCCATCCTTGAGGCCAGTAAAAAGGCAGTAGTGCAAGGCAGTATGGATGTCTTACAGGTAAAATAAGCTGTGGCGGAATTATTCAAAGTTCTTACTTATCCTTATGTCAAATAATTCTTGTATTTGTTCAAACCTACTAAAGTTATTAGTATTACTTTACTAGTTATGTACTGTCCCCCTCAAGATTTAGACTTCATCGGAGGGTGGGACGGGTGATTTTTAAAGTTGATGGTACATGTTGATCAATTCTACTTCTGCCCTTACGGTGTTTAGCTTCAGTGTTAGAGCCTACTTGGACATCAATTACGAAATCTACATGATATAGAAGTAACAGACTGAAGAGTTCTTATGAGTATAGGTGGAGAAACCCTTCGGGGTGACCCAGTTGTTTGAGCTTGGGACTTCCATGTTGGAGGTCTCAAGTTCGAAACCCCTTGCCAGCGAAAGTAAGGGGTTTGCCTTCTGGGTCGAGCTCGTCACACCAGGCTTGCCTAGTGCGGGTTACCTCTCCTATGTGGCTTGCGAGCTATTGCATGGGAGCGGTGGTGTTACCCTGTGCACACCCAAAGGGTAGCGGCTGCGGGTTTCCCTTGTCATTAAAAAAAAATATAGGTGGAGAACTTCCAATAAGTAAAATCCATTTCCATGTGAGTAATTTACTTGCGAATAGTTCTATGGAATGCAATAATAATATGATGATGCTTTTACAAATTTGCACTGGTATTAAATTATTGAAATGCGTCTATGCTCTCTGTGGTCTTTGCACAAGACGTCAATACAATTGATCTCAAGTAATTGACAGATAGTTTTAACTATTAACTAGGCCAAAACAACTACCTGAATTATAACTCAACTAGACAAAAACTAGCTCCCTGTATCAAAGATAAATAGACTTGCTTCCTGTATCACAAGGAACCTACCTTCTAAAAGAAAAGATGAAGCTATAAAATCACGATTACAGGTACTTAATTCCTAGTGAATTCTGTTCTGAGTTGCACCTTTGCTTTGATTTCTTGTATGACAGGATTTCCGTCAACTTCTTGATGAAAACTTGGAACTGCTTTCTAAGTTGAGAGATTTGGTTATTGACTGGGTACAAGAAGGATTTCAGGACTTCTTCAGGAAACTTAATGATCATTTTTTCTTACTTTCTGGAAAGAAAAATCCAGCCGGTCAAGATCTAAGCTTTCATGAGGGAATACAGAGAGACAAAATACTTCCTGGGCTTGTTCTTGTGCTCGTTCAACTCTCTGTTTTTGTTGAGCAAAATGCCATTCCCAGAATTACCGAGGTTAGTGGTGGCCTAGCAGTTATAGCCAGTATAATTTTATGTTCTGCCCCATTTAATTGGCACTTCTTAACTTTTCAAATCTTTCAGGAAATTGCCTCATCTTTCTCTGGTGGTGGGTCTCGGGGCTATGAAAATGGTCCAGCTTTTGTTCCTGCAGAAATTTGTCGCACCTTCAGAGCAGCTGGTGAAAAATTCTTGCAGCATGTATGTTATTTATATTCTGAGCATCTTCTTTCTCTTACAGATGCCCAACACTATTATTCTTTTCCAGTGACTGGCTTAACTACAGAATCTGAATTATTTTGCTTAACTACTGAGAGTTTAATGTCTCCGCCATGGTTAGTCTTCTATTGCTAACAAGTTCGTATGTTGTTTCTTTAAGAAACATACAGCAATTTAATGGTAGATGTCTAGAGCTACTGAAGTTTACTGTGTAAAATCTTCTATTGGGAGAAAAGTGGTTATGCAGTATGCAAAAGCTATAGGTAACACTTGTATAAGGGGATCCCAGATCATGTAAGCAAATTCACTGTCTTAGTGCTTGGTTGTTGTTATTTGTTAAATCCTTACATGTCTAAAAAAAATAAGCTATATGATTTTTTATTTTTTTTGTGAACTACTTTTCATCTGGTGAATGAATTATAGCACATTTTGGAAGAAGTAACATTTTTCTATAATTATATCTAGTAGAACTGCTGAATGTAATTTTTGTTAGTCGGTAGGCCATAAAGATGTTTTTCTTGTATCTAAATGATTTCATACGCTTTCCCAATTCTTGCTTTTGAAGGTTCTTGATGATGTGCTATATGGATTGCTTGCTTATCTATGTAGCATCTTTCACTGTTTCAATTTTCAAATCATCTTCTTAGCTTGATTACAGTTTTATAAATGAAACATGAAATTTGTTGATTCTTTTGTTACCTTCTTTAGTAGAGTATGAAATCAAAATTCTGATTCTCTTCATCTCCATTTATTCTCAGTATATTAACATGAGAACTCAGAAGATATCATTTGTCTTGAATAAAAGGTTTACAACGCCAAATTGGGTCAAGGTAAGCTTAACACATAATGAGGTAGGAGTATTTACCCAAGAGCAGAAATGTGATGGTTTGTGCTAATTCGTCTTACCTTTTCCTGTTTGTACAGCATAAAGAGCCCAGAGAAGTTCATATGTTTGTTGATCTGCTTCTTCAAGAGGTAATTTTGGCTTTATCTTCTTTTCCTGTTATAAGAACGGGAAGTTAATGTGCGGTGTGGGCGAAAACTATCCCCTCATTGTAATATGTAATTGGATACATGACAAGAATTAACATTTTCTTTTTTATCTTATTGCCAGCTAGATAGTATCATTAAAGAAGTAAAGAATATGTTGCCTGAAGGGATCCAGCGTAAGCATCGCCGTTCTGACAGCAGTGGGAGCACCATTTCCTCCCGTAGTAATCCATTAAGAGATGACAGAATGGTACGGTCAAATACCCAGCAGGCGAGAAGTCAACTCCTTGAGTCCCATTTGGCGAAATTGTTTAAGCAGAAGATGGAAATTTTCACAAAAGTTGAACATACACAGGTTGGGTGCTAGTGTTTGTCACTTGGTAAACTTCATTTGTCTGGAAGAACAATGGTTAAGAATGTCCTTGATTTTGCAGGACTCAGTAATAACTACTATCGTGAAACTTTGCTTGAAGAGTTTACAAGAATTTGTCCGACTTCAGACTTTTAACCGTAGTGGATTTCAACAAATTCAGCTGGACATCCATTTTCTTAAAACTACTCTGAAGGACACTGCCGATGATGAAGCTGCTGTTGATTTTTTGCTTGATGAGGTAAAGACATAATGCCTACATATCTTCTTTACAGCTACTATGTCGAAGGAACCTTTGGCTAGTGTCTCCTCTTCAGTGACACTTCCTTTTGTGCAGTATGAAAGTTCTCAAAGGGTCCATTACACTGCTGTTTATTTGCTGGAAACTGTACATATCGATAGAGTTGTTGCTTCAACTGTTCTTTTGTCTAACAAGAGATTAAATGAACTTTATCTTCTTGAACGAACAGGTAATTGTTGCTGCTGCTGAGCGATGTCTTGATCCAATTCCTCTGGAACCTTCTATCCTGGACAGGCTTACCCAAGCAAAGCTGGCAAAGGCTCGGGAGCAGAGTCCTACCTCATAACAATTATGGTGGCGTTGTGACCATTGAGCTTGCCATGATCTGAAAACGTTCACGAGATGCTGGCTTACATGCCAAGTACTATATCGGAAATATCAGATCCATGAAAACCTTCTGTAAGGTGTGTATATAACCATTATCCATCTCCGGCTACCATTTCCTAAACGACTTTCAGTTTCCCTCCGAGTACCTTCAGTTTTCCCAAATCCTGAAGAGGTATTGTTTTGCTGGAAACTAAAGGGGAAACGAAAAACTCTTGTATTGAAACTAGACAGTTGAGTGTAATGAATGTTGTTTCCTCCCCCTTTGTGTTAATATATAATGACATCTTCTAATATTTGCTACTCCTTCCGTTTTGATTTGTTTGTTTGATTTTGACTTCATTCGAAGTTTGAGAAAGTAAACAAAACTTTTGAATCTTATGATTTTATACATGTCACGTCAAAACTTGAAATTAGAAAAAGGAGAGTAACATGATTAAATTGAAATGGGGGAGTACCCTCACGAAGAAAGATGTTTTGATTTGTTTGTTTGATTTTGACTTCATACGAAGTTTGAGAAAGTTAAGAAAACTTTTGAATTTTATGATTTTATACATGTCACGTAAAAACTTAAAATTAGAAAAAAGAGATTAACATGAATA</genome_strand>
        <mrna_strand>TAAAAT............................................................................................................GCACTTTGAATCCACCCAGCAGCACATCAAGAAACAACTTGCTTCTTCTGATCTTGTTGCCATGTTAA...........................................................................................................................................................................................................................................................................................................................GGATTATTTGGACTGACGTGCTTCTCATGGATGGAGTGTTGCCTGAGGCTGGTCTGCGTGATATTACCATGGAG..............................................................................GCTGCTCATGTTGCCGTTAAACAGTACGTTGCTAGCAGATTTAGCCATCTTCTACTTGATATTTCAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCTGTCGTCAAAGTGGGTAATCAAATGGAGGGTATTGAAGAAAAAAATTCTTTGCAGGCCATCCTTGAGGCCAGTAAAAAGGCAGTAGTGCAAGGCAGTATGGATGTCTTACAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTTCCGTCAACTTCTTGATGAAAACTTGGAACTGCTTTCTAAGTTGAGAGATTTGGTTATTGACTGGGTACAAGAAGGATTTCAGGACTTCTTCAGGAAACTTAATGATCATTTTTTCTTACTTTCTGGAAAGAAAAATCCAGCCGGTCAAGATCTAAGCTTTCATGAGGGAATACAGAGAGACAAAATACTTCCTGGGCTTGTTCTTGTGCTCGTTCAACTCTCTGTTTTTGTTGAGCAAAATGCCATTCCCAGAATTACCGAG.......................................................................................GAAATTGCCTCATCTTTCTCTGGTGGTGGGTCTCGGGGCTATGAAAATGGTCCAGCTTTTGTTCCTGCAGAAATTTGTCGCACCTTCAGAGCAGCTGGTGAAAAATTCTTGCAGCAT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATATTAACATGAGAACTCAGAAGATATCATTTGTCTTGAATAAAAGGTTTACAACGCCAAATTGGGTCAAG..............................................................................................CATAAAGAGCCCAGAGAAGTTCATATGTTTGTTGATCTGCTTCTTCAAGAG...........................................................................................................................................CTAGATAGTATCATTAAAGAAGTAAAGAATATGTTGCCTGAAGGGATCCAGCGTAAGCATCGCCGTTCTGACAGCAGTGGGAGCACCATTTCCTCCCGTAGTAATCCATTAAGAGATGACAGAATGGTACGGTCAAATACCCAGCAGGCGAGAAGTCAACTCCTTGAGTCCCATTTGGCGAAATTGTTTAAGCAGAAGATGGAAATTTTCACAAAAGTTGAACATACACAG...............................................................................GACTCAGTAATAACTACTATCGTGAAACTTTGCTTGAAGAGTTTACAAGAATTTGTCCGACTTCAGACTTTTAACCGTAGTGGATTTCAACAAATTCAGCTGGACATCCATTTTCTTAAAACTACTCTGAAGGACACTGCCGATGATGAAGCTGCTGTTGATTTTTTGCTTGATGAG.....................................................................................................................................................................................................................................GTAATTGTTGCTGCTGCTGAGCGATGTCTTGATCCAATTCCTCTGGAACCTTCTATCCTGGACAGGCTTACCCAAGCAAAGCTGGCAAAGGCTCGGGAGCAGAGTCCTACCTCATAACAATTATGGTGGCGTTGTGACCATTGAGCTTGCCATGATCTGAAAACGTTCACGAGATGCTGGCTTACATGCCAAGTACTATATCGGAAATATCAGATCCATGAAAACCTTCTGTAAGGTGTGTATATAACCATTATCCATCTCCGGCTACCATTTCCTAAACGACTTTCAGTTTCCCTCCGAGTACCTTCAGTTTTCCCAAATCCTGAAGAGGTATTGTTTTGCTGGAAACTAAAGGGGAAACGAAAAACTCTTGTATTGAAACTAGACAGTTGAGTGTAATGAATGTTGTTTCCTCCCCCTTTGTGTTAATATATAATGACATCTTCTAAT.............................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLe0045F21-xnYek/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U321516" ref_strand="+" ref_description="SGN-U321516        Tomato 200607 #1 [3 ESTs aligned] arabidopsis/peptide: | Symbol: None | expressed protein, similar to expressed protein [Arabidopsis thaliana] (TAIR:At1g21170.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:AAR07074.1) | chr4:892176-897318 FORWARD | Aliases: T10M13.4, T10M13_4(evalue: 1e-74, score=276) genbank/nr: unknown(evalue: 8e-73, score=276)">
      <seq>ttcagaggcatgtcgaaatggctgctgagataaagaatctcgatactgacctgcaaatgctggtatatgaaaattacaacaagttcgtaagtgccacagacacaattaaaaggtaaaccatgttctagaaagttgtttcgaacccattccatcccttgagagacaaacattaaggggtacagttgcaacttaactctttgtaggttgagttttttagtacttatagcatgtttcacgggtcctcaatttcactgttagaggtttcttaaactaattgtgcttggctgcatcttatatgttgaatcaggactaactgggttttatcttgtcatgttctcatttggcataataaagagctcacctatatgattaccttcccaggatgaaaaacaatattgttggcatggagacaagtatggagcagcttcttgaaaagataatgtccgtgcaatctaaaagtgatggggtcaatacttttctttttgagaagagggaacacatagagaaattgcataggacccgtaatcttctacgcaaaattcagttcatatatgatctacccgctaggttagcaaagtgtatcaaatcagaagcctatgctgatgctgtgaaatactacactggagccatgcccattttcaaggcatatggagactcttcgttccaggattgcaaaagagcctcagaggaagcaattgctgttattacaacgcacttgcagggaaaggtattttcagattctgaatcaatacaagccagggctgaagctgttatgctccttaagcagttaaattttccggttgataatttgaaggtgcaactatttgaaaagttagaacagttccttgtggatctccatctggaatctaaggaactaccccctgcttcagtagatcaaggaaatcttcctgaatcagctacttctgctgctcatgaggcttctattcgtgaattttccgaggctgtccgtgcttatcgagttattttccatgattcagaaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLe0045F21-xnYek/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06SLe0045F21.1" temp_strand="-" temp_description="C06SLe0045F21.1  AC216658.1 htgs_phase:1 submitted_to_sgn_as:C06SLe0045F21 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="77487" stop="72182"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="77187" g_stop="76752" g_length="436"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="436" r_length="436" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="76751" i_stop="76584" i_length="168">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.915" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="76583" g_stop="76476" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="437" r_stop="544" r_length="108" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="76475" i_stop="75741" i_length="735">
            <donor d_prob="0.901" d_score="1.00"/>
            <acceptor a_prob="0.556" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="75740" g_stop="75642" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="545" r_stop="643" r_length="99" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="75641" i_stop="75542" i_length="100">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.445" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="75541" g_stop="75464" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="644" r_stop="721" r_length="78" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="75463" i_stop="74864" i_length="600">
            <donor d_prob="0.542" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="74863" g_stop="74786" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="722" r_stop="799" r_length="78" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="74785" i_stop="73521" i_length="1265">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="73520" g_stop="73383" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="800" r_stop="937" r_length="138" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="73382" i_stop="72547" i_length="836">
            <donor d_prob="0.933" d_score="1.00"/>
            <acceptor a_prob="0.901" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="72546" g_stop="72482" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="938" r_stop="1002" r_length="65" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLe0045F21.1" gen_strand="-" ref_id="SGN-U321516" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>1002</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLe0045F21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U321516" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="77187" e_stop="76752"/>
          <exon e_start="76583" e_stop="76476"/>
          <exon e_start="75740" e_stop="75642"/>
          <exon e_start="75541" e_stop="75464"/>
          <exon e_start="74863" e_stop="74786"/>
          <exon e_start="73520" e_stop="73383"/>
          <exon e_start="72546" e_stop="72482"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCAGAGGCATGTCGAAATGGCTGCTGAGATAAAGAATCTCGATACTGACCTGCAAATGCTGGTATATGAAAATTACAACAAGTTCGTAAGTGCCACAGACACAATTAAAAGGTAAACCATGTTCTAGAAAGTTGTTTCGAACCCATTCCATCCCTTGAGAGACAAACATTAAGGGGTACAGTTGCAACTTAACTCTTTGTAGGTTGAGTTTTTTAGTACTTATAGCATGTTTCACGGGTCCTCAATTTCACTGTTAGAGGTTTCTTAAACTAATTGTGCTTGGCTGCATCTTATATGTTGAATCAGGACTAACTGGGTTTTATCTTGTCATGTTCTCATTTGGCATAATAAAGAGCTCACCTATATGATTACCTTCCCAGGATGAAAAACAATATTGTTGGCATGGAGACAAGTATGGAGCAGCTTCTTGAAAAGGTTTGCTTATTTCTTTTTTCCCTTTTACTTGTTTAAGGAATTTTGAACTTTTTTTGGGTTATAATCACGACCTAAGCAGCAAAACACTGAAAGATGTGTATCAAGAATTAGATTTTCTTCAATTATTGGCAGATAATCTGTTACGATTCCCAAAATAATTATTTGCAGATAATGTCCGTGCAATCTAAAAGTGATGGGGTCAATACTTTTCTTTTTGAGAAGAGGGAACACATAGAGAAATTGCATAGGACCCGTAATCTTCTACGCAAAATTCAGGTACTAAAGTCAGGTGTTAAGCTCTTGCAATGTTTTACGCAATTGGGAAATGTGTCTTTTCTTATTAAGTAATGAAGTTACTAACTGTGGGTTCTTATAACAACCGTTACAACTAAGTTGTTAGTGATGAGGATAGAGGAATAAGCATTTCCTTTATACGCCCGATATTTTGAGCTGGTTGACTTTTGATTGTTTATGATTTAACCAAGGGAAATACTTGTAAAAAAACAATTAAGCAAAGGAAAACAAGACGCTCATTCGGCAGTGAAACAGATTTATCCAGATATTAATTAAAAATGGCATCATCTATTACATCCAGTACAAGCTGCCTGAACTCATTATTCATGGGGTATATGTAAAATTGTTTTTAGGGAGGAGGAGGAATTATAATACAACATACCCAGTGAAATCCCACAATTGGGGTCTGGGGAGGAAGGAATTATCCATTCCATATTTTAGCCACTGGATCTTTAGAGCTCTTAATAGTTCACATGATTAAATGGTCAAAAAAGAATTGGTGAAGTTGTAAATAAATGCTAATTGTCAATTGAAAAAAGTAATATGCATTTTTACCTTCGCAGTCTTATAGACTTCTTGTTCAGGTTCATCATGTAACTTTCTTTTACGACAAAGATAAAATGCAACTTTATGTTGTATATTGCTATCAATTGTATATGAGTTGGTTTCTAGTTTTGTGTGAGTTACATGGATTTCATTTTCTGTGGAAAAGAGCAGTTCATATATGATCTACCCGCTAGGTTAGCAAAGTGTATCAAATCAGAAGCCTATGCTGATGCTGTGAAATACTACACTGGAGCCATGCCCATTTTCAAGGTTTGTGTATAGTGATATTTGTTCCACTGTTTTTCCTGTTTGTATGATGTAAATGCACGTCAAAGTCTCATCTTTAAGGTCAGCACTTTTTCATCACCAGGCATATGGAGACTCTTCGTTCCAGGATTGCAAAAGAGCCTCAGAGGAAGCAATTGCTGTTATTACAACGCACTTGCAGGTTTCTCCTTTTTTCGAGTTAGCAATTACTTTGTTGAGAGAGGCCATAGTTGGTTGAGGTACTTAAACAGAATTAGATATTTTGTTAAGATGGAAGGAAAGGGAGGAGAGAAGACGAAGAATAAAGAAAGAGTTTTGAAACTTGTGGTCTTCAACAAGCCATAGACATTTGTGCAACTATAAATCATCTAATTAAGGGTAAATGAGAGGTTTGAAGTTAAATTGTTTTTAAAATAGAAAGGTGCCATTCTTTTTGCGACAAACTAAAAAGTAAAGCGTGTCACACAAAAATGGGATAGACGGGAGCGGGGGGGGGGGGGGGAGGAGTTGTTGATTTTGTGTTTGAGTTGTCCAGCGTTACTTTTCCATTCTAAACATCCCAGCAAAGTTTCATTTATCCCTATGAACCATTTAGATCTCTGCCATGCTGTGGAGTGTTTTGATCTGCCCTCTCTCTAAGGGCTAGTTTTGAAGGAGTTGGGGAAAAGAGGAATCTGAATACAAATTTTGCAGAAACTGGTTCAAGCCATTTTGGGTTTCTATCAAGAATTTGGCAAAAATGATCGTTTGAGCTTTCATATTACTTTTTCTTTGGTTACAGGGAAAGGTATTTTCAGATTCTGAATCAATACAAGCCAGGGCTGAAGCTGTTATGCTCCTTAAGCAGTTAAATTTTCCGGTTTGTATCACCCCTCTTTTTCTGCTTCTATATATGAGCATTTCTATCACTTGTTGTGCATGGTTCTATTTATCCTTGAATGTTAGAACGGAGCTTTAATTTCATAAGAATTTTAGTCTGCTTTAGTTTAAATAAAATATGTACTAAATGCACTGCTTAGCTTCTAGTTGTTTTCTCAGCCCTGTGAAGAGTGAAGATGAGTATGTCGATGGTCTCAATTTTATCCATGCCTTGCTCGGCAGTAGCTAGTAAAATTGCTCCATTTTGTTGAAAGTTTAATCCAATGTGAATTAATTGCACAATGGGTTAACTTGATAAATTATATCACTTGTGTAAGAACGGCTGGGAAGGGGTGTGGGTAAGCGACGTCTGAAATACATATTAAGATGACTTTCGTATATTTTGGATAGCCATATACTAAGATCCTCTTACTGTTTGTCTTAAAAATATGTGCCTTTAATAACTTAAAATATTTTTGGTTTTTTAAAAGGATTATGATAAACTTCCTATTATAATAACATAGACATAAGCTATGTTACTAGGACTCTTAAAAAATGTCGCTGCACCCATGTCAGATCCTCCAAAATAAACTACTTTTGGAGGATACGACATGCACCTGACGAGAATTTTGAAGAGTTTGAGGAACATAAGACATAGGTACCTTATGTCCCCTGAATTATCATCAAAACCCTACGGTTGCCAGTCCCTCTGAATGAAAATCAGCTTCTTTTGTCTAATATGCCTCTTCAATTTTATCCTTTTCTTTTCTCAAGTGGAGAATTGAAAATGTTAAGGATGTGTTTTTACGTAGTGCAATGGTAAATGTGGTCATTTTTGTATGCTTATAGAGCCAAAAGGATATGGTAGTTTGTTGGTAACTAAAATTATTTCTATGCCAGTATCATGGTATGGATTATTCATCGCATGCTTGTCGAAATAACTTCCCTCAAGATGAAAAGAAAAATATATGATGTAAAGAGGAAACCCACGGCCTCATATTCTTTGGATATCATTGTAAGAATAACTGTATATGTTCGAGTGTAGTTTGTAAATACTATAAATGACTGAAACAAAAATTCATGTGTTTATTGGTGCAATCAACATTACTGATGCTTCTATTGTCTTCCTCTTGTATGTTGATCTTCTTTTTTTTTAAAAAAATGGTAGCATCTTGTATTAAAATCAAAAATGCTGCAAAGCCATAATTATAAAGAGTGTGAGCAAAAACTAACATGTTGATCTTTGAATGCATATATTTTATGCAGGTTGATAATTTGAAGGTGCAACTATTTGAAAAGTTAGAACAGTTCCTTGTGGATCTCCATCTGGAATCTAAGGAACTACCCCCTGCTTCAGTAGATCAAGGAAATCTTCCTGAATCAGCTACTTCTGCTGCTCATGAGGTGTGTTAAAGCAAGGTCATTACTCATGCTTTGAAGTTGGAATCTTAGGCTACAATGTGAACACCAAAGAGAGATGAGAAAGAAGCAAGGGGAAGAAACAAGAAGGATAAAGAGAGAAGAATGTGAGGGAGAGACGGAAGACAGGGAGAGGAGAAACAGGGAGACGATTGTGGAATAGATAGAATGACTAAGACAGAAGAAGAGGGAGAAAGAAGGGAGAATGGAGAGAGTCGGGAGTGAAAGAAGTTTCAATATAAAATTTGGTTTGTCTAATGTTTTTCAAAATAAAGTATGTGAAGATCCTAGTGTAGCATGGGGCTTTTAATTAAGGGAGACTTTTACAACAACAATATCCTGTGTCATACCACATGTGGGGTAAGGGAGGCTTTTAGTTATAAAAAAAGGGAATAAGGATAACTAAAACTAAGGATAGGGATAGGGATGTGAATAATGACAATGATGTTTTTGGTTAAATACATTAATAACACTATTTCCTTTACTTTTTTTTAAAGATGAGTACCCCTCCCAACCTTGCAAAGAGGTGGAAATTATCACTACAAAAAGGGTGTGAATGATACTTGAGAAAAGAAACTAACCATAATTAAAGTTCAATGAATTGCATACAATATCACTTCGCTGAGATATTTGTTATGCGACATTCTAGTTCCCCGCACTTAGCTTAATACAAGATGGTGAAACCAAAAGGACACATATTCGGGATCTTAAGTATGCTTCTGGAGTTCCTTTCTGGATTGAATTGTATGGTTGATTTATTCATTTTCTCTCCTTCTGAGCACTAATTGTATTTACATTAATGTTTCCTATTCATGACTTAGGCTTCTATTCGTGAATTTTCCGAGGCTGTCCGTGCTTATCGAGTTATTTTCCATGATTCAGAACA</genome_strand>
        <mrna_strand>TTCAGAGGCATGTCGAAATGGCTGCTGAGATAAAGAATCTCGATACTGACCTGCAAATGCTGGTATATGAAAATTACAACAAGTTCGTAAGTGCCACAGACACAATTAAAAGGTAAACCATGTTCTAGAAAGTTGTTTCGAACCCATTCCATCCCTTGAGAGACAAACATTAAGGGGTACAGTTGCAACTTAACTCTTTGTAGGTTGAGTTTTTTAGTACTTATAGCATGTTTCACGGGTCCTCAATTTCACTGTTAGAGGTTTCTTAAACTAATTGTGCTTGGCTGCATCTTATATGTTGAATCAGGACTAACTGGGTTTTATCTTGTCATGTTCTCATTTGGCATAATAAAGAGCTCACCTATATGATTACCTTCCCAGGATGAAAAACAATATTGTTGGCATGGAGACAAGTATGGAGCAGCTTCTTGAAAAG........................................................................................................................................................................ATAATGTCCGTGCAATCTAAAAGTGATGGGGTCAATACTTTTCTTTTTGAGAAGAGGGAACACATAGAGAAATTGCATAGGACCCGTAATCTTCTACGCAAAATTCAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCATATATGATCTACCCGCTAGGTTAGCAAAGTGTATCAAATCAGAAGCCTATGCTGATGCTGTGAAATACTACACTGGAGCCATGCCCATTTTCAAG....................................................................................................GCATATGGAGACTCTTCGTTCCAGGATTGCAAAAGAGCCTCAGAGGAAGCAATTGCTGTTATTACAACGCACTTGCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAAAGGTATTTTCAGATTCTGAATCAATACAAGCCAGGGCTGAAGCTGTTATGCTCCTTAAGCAGTTAAATTTTCCG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGATAATTTGAAGGTGCAACTATTTGAAAAGTTAGAACAGTTCCTTGTGGATCTCCATCTGGAATCTAAGGAACTACCCCCTGCTTCAGTAGATCAAGGAAATCTTCCTGAATCAGCTACTTCTGCTGCTCATGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTCTATTCGTGAATTTTCCGAGGCTGTCCGTGCTTATCGAGTTATTTTCCATGATTCAGAACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLe0045F21-xnYek/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U329937" ref_strand="+" ref_description="SGN-U329937        Tomato 200607 #1 [3 ESTs aligned] arabidopsis/peptide: | Symbol: None | zinc finger protein-related, weak similarity to mudrA (Zea mays) GI:540581, MURAZC (Zea mays) GI:1857256; contains Pfam profiles PF03108: MuDR family transposase, PF04434: SWIM zinc finger | chr1:18485466-18487901 REVERSE | Aliases: T18C15.1, T18C15_1(evalue: 8e-05, score=43.1) genbank/nr: putative(evalue: 3e-16, score=86.7)">
      <seq>cacatgtgggagatttcaattgaatgagttaccatgtccacatgctttggccgttttaacaataaaacacactggttatgagaaatattgttcggctaactatacaagaaaatatttattgttgacatatcaatttcaaatggatctcctgccaaatgaaagtacatggaacacaccaacacatgtttatgaagatgttgtacttccatctcttggaaatagacctccgggaaggccaaaaaataaaagacatactcaactgagagaagatggattcaagaaggcgaaaattacatgcagcaattgtggacaacatgatcacaacaggaagacttgcaaaaatgtcaggccttatgatcaagaataaaaaatacaatttgttttagtagtttgttttagaagctcattgactctacgaatttggatcatgttcggttatatggtttatatttttagtttcgcaatctcgtgctattcagtttaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLe0045F21-xnYek/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06SLe0045F21.1" temp_strand="-" temp_description="C06SLe0045F21.1  AC216658.1 htgs_phase:1 submitted_to_sgn_as:C06SLe0045F21 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="88962" stop="87875"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="88662" g_stop="88173" g_length="490"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="491" r_length="491" r_score="0.941"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLe0045F21.1" gen_strand="-" ref_id="SGN-U329937" ref_strand="+">
        <total_alignment_score>0.941</total_alignment_score>
        <cumulative_length_of_scored_exons>490</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLe0045F21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U329937" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="88662" e_stop="88173"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CACATGTGGGAGATTTCAATTGGATGAGTTACCATGTCCACATGCTTTTGCCGTTTTAACAATAAAACACATTGGTTATGAGAAATATTGTTCGGCTTACTATACAAGAAAAAATTTATTGTTGACATATCAATTTCAAATGGATCCCCTGCCAAATGAAAGTACATGGAACACAGCAACACATGTTCTTGAAAATGTTGTACTTCCACCTCATGGAAAGAGACCTCCGGGAAGGCCAAAAAATAAAAGACATACTC-ACTGAGAGAAGATGGATTCAAGAAGGCGAAAATTACATGCAGCAATTGTGGACAATATGATCACAACAAGAAGACTTGCAAAAATGTCAGGCCTTATGATCAAGAATAAAAAAAATAATTTGTTTTATTAGTTTGTTTTAGAAGCTCATTGACTCTACGAATTTGGATCATGTTCGGTTATATGGTTTATATTCTTAGTTCTGCATTCTCGTGTTATTCAGTTTAATAGAATG</genome_strand>
        <mrna_strand>CACATGTGGGAGATTTCAATTGAATGAGTTACCATGTCCACATGCTTTGGCCGTTTTAACAATAAAACACACTGGTTATGAGAAATATTGTTCGGCTAACTATACAAGAAAATATTTATTGTTGACATATCAATTTCAAATGGATCTCCTGCCAAATGAAAGTACATGGAACACACCAACACATGTTTATGAAGATGTTGTACTTCCATCTCTTGGAAATAGACCTCCGGGAAGGCCAAAAAATAAAAGACATACTCAACTGAGAGAAGATGGATTCAAGAAGGCGAAAATTACATGCAGCAATTGTGGACAACATGATCACAACAGGAAGACTTGCAAAAATGTCAGGCCTTATGATCAAGAATAAAAAATACAATTTGTTTTAGTAGTTTGTTTTAGAAGCTCATTGACTCTACGAATTTGGATCATGTTCGGTTATATGGTTTATATTTTTAGTTTCGCAATCTCGTGCTATTCAGTTTAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLe0045F21-xnYek/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U329394" ref_strand="+" ref_description="SGN-U329394        Tomato 200607 #1 [3 ESTs aligned]">
      <seq>gattgcaaattttttttctctctcgcgactgcaattttttctctctcgtgattgcaatttttttcggtgacttcaattttctctcgccattgcaatttaaaggttagtgttgagtaagatctgttattttaggttacttgcattgcaatctgcgatttttgttggtttcctttgcacttaactgatcctttaatgtgagcttgcaattgtggtcttgacagtgcccagatcgttacgcctttcttctttttgtgtggatttatgttgagatttcgtttgatttatgtttacgttacttgtgtgcctttttgtttgatgatttatgttgagatttcgtttgattcaagttcctgtgagtgtctggtattcagctctcttctctaataagtatgatctcttgttagcatctgtgtaatacaactttaattcaggtttaattcactttttagcatttatgtaatacaacttcaattcagttttagttcacttgttagcatccgtgtaatacaactttaattccggtttaattcaattgttaacatctgtgtaatacaactttaattcaagtttgattcacttgttagcatccgtgtaatacaactttaattccgatttaattcacttgttaacatctgtgtaatacaattttaattcaagtttaattcacttgttagcattagtgtaatacagctttaattcatgtttaattcacttgttagtatttgtgtaatacaacttcaattcaattttagttcac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLe0045F21-xnYek/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06SLe0045F21.1" temp_strand="-" temp_description="C06SLe0045F21.1  AC216658.1 htgs_phase:1 submitted_to_sgn_as:C06SLe0045F21 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="92225" stop="90872"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="91926" g_stop="91172" g_length="755"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="757" r_length="757" r_score="0.934"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLe0045F21.1" gen_strand="-" ref_id="SGN-U329394" ref_strand="+">
        <total_alignment_score>0.934</total_alignment_score>
        <cumulative_length_of_scored_exons>755</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLe0045F21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U329394" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="91926" e_stop="91172"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATTGC-AATTTTT-TTCTCTCTCGCGACTGCAATTTTTTCTCTCTCGTGATTGCAATTTTTTTTCGACGACTTCAATTTTCTCTCGCCATTGCAATTTAAAGGTTAGTGTTGAGTAAGATCTGTTAGTTTAGGTTACTTGCACTGCATTCTGCTATTTTTGTTGGTCTCCATTGCACTTAACTGATCCTTTAATGTGAGCTTGCAATTGTGGTATTGACAGTGCCCAGATCGTTACGCCTTTCTTCTTTTTGTGTGGATTTATGTTGAGATTTCGTTTGATTTATGTTTACGTTACTTGTGTGCCTTTTTGTTTGATGATTTATGTTGAGATTTCGTTTGATTCAAGTTCCTGTGAGTGTCTGGTATTCAGTTCTCTTCTCTAATAAGTATGATCTCTTGTTAGCATCTGTGTAATACAACTTTAATTCAGGTTTAATTCACTTGTTAGCATTTGTGTAATACAGCTTTAATTCATGTTTAATTCACTTGTTAGCATTTGTGTAATACAACTTCAATTCAATTTTAGTTCACTTGTTAGCATCCGTGTAATACAACTTTAATTCAGGTTTAATTCACTTGTTAGCATCTATGTAATACAACTTCAATTCAGTTTTAGTTCACTTGTTAGCAT-TGTGTAATACAATTTTAATTCATGTTTAATTCACTTGTTAGCATTTGTGTAATACAGATTTAATTCATGTTTAATTCACTTGTTAGCATTTGTGTAATACAACTTTAATTCAGTTTTAGTTCAC</genome_strand>
        <mrna_strand>GATTGCAAATTTTTTTTCTCTCTCGCGACTGCAATTTTTTCTCTCTCGTGATTGCAA-TTTTTTTCGGTGACTTCAATTTTCTCTCGCCATTGCAATTTAAAGGTTAGTGTTGAGTAAGATCTGTTATTTTAGGTTACTTGCATTGCAATCTGCGATTTTTGTTGGTTTCCTTTGCACTTAACTGATCCTTTAATGTGAGCTTGCAATTGTGGTCTTGACAGTGCCCAGATCGTTACGCCTTTCTTCTTTTTGTGTGGATTTATGTTGAGATTTCGTTTGATTTATGTTTACGTTACTTGTGTGCCTTTTTGTTTGATGATTTATGTTGAGATTTCGTTTGATTCAAGTTCCTGTGAGTGTCTGGTATTCAGCTCTCTTCTCTAATAAGTATGATCTCTTGTTAGCATCTGTGTAATACAACTTTAATTCAGGTTTAATTCACTTTTTAGCATTTATGTAATACAACTTCAATTCAGTTTTAGTTCACTTGTTAGCATCCGTGTAATACAACTTTAATTCCGGTTTAATTCAATTGTTAACATCTGTGTAATACAACTTTAATTCAAGTTTGATTCACTTGTTAGCATCCGTGTAATACAACTTTAATTCCGATTTAATTCACTTGTTAACATCTGTGTAATACAATTTTAATTCAAGTTTAATTCACTTGTTAGCATTAGTGTAATACAGCTTTAATTCATGTTTAATTCACTTGTTAGTATTTGTGTAATACAACTTCAATTCAATTTTAGTTCAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLe0045F21-xnYek/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U343510" ref_strand="+" ref_description="SGN-U343510        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: | Symbol: None | expressed protein | chr2:16667674-16670122 FORWARD | Aliases: T28M21.7, T28M21_7(evalue: 3e-35, score=145) genbank/nr: gi|30688076|ref|NP_565917.2| expressed protein [Arabidopsis thaliana](evalue: 2e-33, score=145)">
      <seq>aaagacctatctaaagcttatgctaccatggctgctgggaatcatgacctgatcaaatttggcgagctggatcttgattttaagcctctcccaaatgataaaatcttggccatacacttaatccctcaactcttgcctttgctaaaagacacgattaaagagagtgccattgataaatcaattgatggtcatgagatatcagctgcaagcgctagtgttcctgtagcatatgccattattgctgcttatcagtttagatggctcatttctcaggtggattatcctcaccttggaaaagtgtgctcttgggtgattccatgtgccctaacagctcttgatcactggtcgtctgaagtaaagggacagggcatgattagcttaatatatctggcgaaaaatgtcaatgcggctgagattggttggtatgaagatgtaattcttgatgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLe0045F21-xnYek/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06SLe0045F21.1" temp_strand="+" temp_description="C06SLe0045F21.1  AC216658.1 htgs_phase:1 submitted_to_sgn_as:C06SLe0045F21 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="94196" stop="96013"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="94496" g_stop="94768" g_length="273"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="273" r_length="273" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="94769" i_stop="94887" i_length="119">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="94888" g_stop="94974" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="274" r_stop="360" r_length="87" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="94975" i_stop="95627" i_length="653">
            <donor d_prob="0.705" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="95628" g_stop="95713" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="361" r_stop="446" r_length="86" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLe0045F21.1" gen_strand="+" ref_id="SGN-U343510" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>446</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLe0045F21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U343510" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="94496" e_stop="94768"/>
          <exon e_start="94888" e_stop="94974"/>
          <exon e_start="95628" e_stop="95713"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAGACCTATCTAAAGCTTATGCTACCATGGCTGCTGGGAATCATGACCTGATCAAATTTGGCGAGCTGGATCTTGATTTTAAGCCTCTCCCAAATGATAAAATCTTGGCCATACACTTAATCCCTCAACTCTTGCCTTTGCTAAAAGACACGATTAAAGAGAGTGCCATTGATAAATCAATTGATGGTCATGAGATATCAGCTGCAAGCGCTAGTGTTCCTGTAGCATATGCCATTATTGCTGCTTATCAGTTTAGATGGCTCATTTCTCAGGTATGTATATCCTTAATTGGTACTTGAAAGATTTATTTGTATGATTAATTTCTTCAGTTGGTGGTTGGAATTCTATTGAGATGAAATGTATTATATCCTTCTATATTTATCATTTGTAGGTGGATTATCCTCACCTTGGAAAAGTGTGCTCTTGGGTGATTCCATGTGCCCTAACAGCTCTTGATCACTGGTCGTCTGAAGTAAAGGTGCATTTGTCGTTGTATGTTTGCAGGTCTTAGAAATTTGTTGCTGTTTCAATCAGATATCTCACGTACTTGTTGATCGGTGCTTCAAACTATGCTGATAGTCCTATATAACCTTAAAATAGTTAAAACCCTCTAAATAGTGTAAAACTGTTGATTCTTGCAGTGATCCATCAATACTGTGAACGAGTTAGATAATTAGATATTCTAATTGGTGATCCCACTTTTCCTAAATCACTATAAATCAAGTATTAGCTAGCTAGTACTAAACTTGTAAGTGCTTCTACTATTTGGCACATTTCTGAGCTCTTAGCAACTGATGACAACAAAAAGAACATCAAAGATCATGTTTCAGTTTCTTTTCTAAAGCTTGTCCGTGGATACTCTATTAGAGACTTCTGACTGCAATAATGTTGATTGTACCTCTCTCAGTTTATCTTTCCTTTTTAGTCATTTTTCTTCTTCTTCTTCTTCTTAGTAATTACCTTTCTGGCTTAGTCGTTTGGAGCATGATGTAATCCATCTTCAAGCTTAAAATGGTATGTCAAATTGTTACTAGCAAGTGGTAATTGTCTGCTACACATTTGCATCTCATGATTAAGATTAATATTTTTGCTTTCATTAGGTTGTTGACTAAATGTTGTCTCTTACTTCAGGGACAGGGCATGATTAGCTTAATATATCTGGCGAAAAATGTCAATGCGGCTGAGATTGGTTGGTATGAAGATGTAATTCTTGATGC</genome_strand>
        <mrna_strand>AAAGACCTATCTAAAGCTTATGCTACCATGGCTGCTGGGAATCATGACCTGATCAAATTTGGCGAGCTGGATCTTGATTTTAAGCCTCTCCCAAATGATAAAATCTTGGCCATACACTTAATCCCTCAACTCTTGCCTTTGCTAAAAGACACGATTAAAGAGAGTGCCATTGATAAATCAATTGATGGTCATGAGATATCAGCTGCAAGCGCTAGTGTTCCTGTAGCATATGCCATTATTGCTGCTTATCAGTTTAGATGGCTCATTTCTCAG.......................................................................................................................GTGGATTATCCTCACCTTGGAAAAGTGTGCTCTTGGGTGATTCCATGTGCCCTAACAGCTCTTGATCACTGGTCGTCTGAAGTAAAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGACAGGGCATGATTAGCTTAATATATCTGGCGAAAAATGTCAATGCGGCTGAGATTGGTTGGTATGAAGATGTAATTCTTGATGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLe0045F21-xnYek/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U332896" ref_strand="+" ref_description="SGN-U332896        Tomato 200607 #1 [2 ESTs aligned]">
      <seq>aagaaatcagaaaacttgttcttcagactataattttgatccaacagtatatatcatgctctgttacttctgttttctcttccttcatgtgatatggctttttttgtcttgttgtagtttctctctaattattgagttcttcaatttcttaatattttcccctcattgtcaagatccaagggctcgcagttcaaaaccgcttgggacaagcacaaggatgatcctgacttgacaattattcatcgttcccttattaaacaacagcctgcaatggtaaagttatccctctgatttttcacgagaaaaatgagcaaaatgtcggtcaaacattcaagatgatatttgttgcacttacactaggtggtagcatcagctgtcttggccaattttttgctgcaaaatgatcctgtgcttatataatactttgccaaggtggtagcatcagctgtcttagccaattttttgctgcaaaatgatcctgtgcttatataatactttgccaatgatgccctgatctgtaaaatcaaaattcaggttctatctgatggctggtttttagctgctccctcaatcccaatatgtgaaaagtcatttggatagcaatagtgtttaaatgtcgtcttgatcacatattaattgaggaaagcgtgtaatatttgtggcttcttggtgcaattgtgtgctaaaagttcctggagttaatgaaaaaaaaaagggattttgtaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLe0045F21-xnYek/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06SLe0045F21.1" temp_strand="+" temp_description="C06SLe0045F21.1  AC216658.1 htgs_phase:1 submitted_to_sgn_as:C06SLe0045F21 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="97067" stop="98391"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="97367" g_stop="98090" g_length="724"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="724" r_length="724" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="725" polyA_stop="757"/>
      <MATCH_line gen_id="C06SLe0045F21.1" gen_strand="+" ref_id="SGN-U332896" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>724</cumulative_length_of_scored_exons>
        <coverage percentage="0.956" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLe0045F21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U332896" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="97367" e_stop="98090"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGAAATCAGAAAACTTGTTCTTCAGACTATAATTTTGATCCAACAGTATATATCATGCTCTGTTACTTCTGTTTTCTCTTCCTTCATGTGATATGGCTTTTTTTGTCTTGTTGTAGTTTCTCTCTAATTATTGAGTTCTTCAATTTCTTAATATTTTCCCCTCATTGTCAAGATCCAAGGGCTCGCAGTTCAAAACCGCTTGGGACAAGCACAAGGATGATCCTGACTTGACAATTATTCATCGTTCCCTTATTAAACAACAGCCTGCAATGGTAAAGTTATCCCTCTGATTTTTCACGAGAAAAATGAGCAAAATGTCGGTCAAACATTCAAGATGATATTTGTTGCACTTACACTAGGTGGTAGCATCAGCTGTCTTGGCCAATTTTTTGCTGCAAAATGATCCTGTGCTTATATAATACTTTGCCAAGGTGGTAGCATCAGCTGTCTTAGCCAATTTTTTGCTGCAAAATGATCCTGTGCTTATATAATACTTTGCCAATGATGCCCTGATCTGTAAAATCAAAATTCAGGTTCTATCTGATGGCTGGTTTTTAGCTGCTCCCTCAATCCCAATATGTGAAAAGTCATTTGGATAGCAATAGTGTTTAAATGTCGTCTTGATCACATATTAATTGAGGAAAGCGTGTAATATTTGTGGCTTCTTGGTGCAATTGTGTGCTAAAAGTTCCTGGAGTTAATGATATAAAAAAGGGATTTTGT</genome_strand>
        <mrna_strand>AAGAAATCAGAAAACTTGTTCTTCAGACTATAATTTTGATCCAACAGTATATATCATGCTCTGTTACTTCTGTTTTCTCTTCCTTCATGTGATATGGCTTTTTTTGTCTTGTTGTAGTTTCTCTCTAATTATTGAGTTCTTCAATTTCTTAATATTTTCCCCTCATTGTCAAGATCCAAGGGCTCGCAGTTCAAAACCGCTTGGGACAAGCACAAGGATGATCCTGACTTGACAATTATTCATCGTTCCCTTATTAAACAACAGCCTGCAATGGTAAAGTTATCCCTCTGATTTTTCACGAGAAAAATGAGCAAAATGTCGGTCAAACATTCAAGATGATATTTGTTGCACTTACACTAGGTGGTAGCATCAGCTGTCTTGGCCAATTTTTTGCTGCAAAATGATCCTGTGCTTATATAATACTTTGCCAAGGTGGTAGCATCAGCTGTCTTAGCCAATTTTTTGCTGCAAAATGATCCTGTGCTTATATAATACTTTGCCAATGATGCCCTGATCTGTAAAATCAAAATTCAGGTTCTATCTGATGGCTGGTTTTTAGCTGCTCCCTCAATCCCAATATGTGAAAAGTCATTTGGATAGCAATAGTGTTTAAATGTCGTCTTGATCACATATTAATTGAGGAAAGCGTGTAATATTTGTGGCTTCTTGGTGCAATTGTGTGCTAAAAGTTCCTGGAGTTAATGAAAAAAAAAAGGGATTTTGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLe0045F21-xnYek/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U333249" ref_strand="+" ref_description="SGN-U333249        Tomato 200607 #1 [2 ESTs aligned]">
      <seq>gcctgcaatggttgttcaattagggaatcttggtggaactgataaagttgtcgccatatgagggtgagaatgcatacaaatagacccttgcagtctggctcttttttcggactcctcacatagtgagaacttagtgtatcgagttgccattcctatcaattgctgtgatttgttatgccgtgcatcaaacgaagggattgagagtgattgggctcagcctcaatgtaaatagttagtcgcccataggcatactttcaagtttaagatataatactgttacaatgcagaatttcgtatggggatgtacttattttagggtccgtttggatgggcttaataaaagcagctttaaaaaagtaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLe0045F21-xnYek/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06SLe0045F21.1" temp_strand="+" temp_description="C06SLe0045F21.1  AC216658.1 htgs_phase:1 submitted_to_sgn_as:C06SLe0045F21 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="98340" stop="99298"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="98650" g_stop="98995" g_length="346"/>
          <reference_exon_boundary r_type="cDNA" r_start="11" r_stop="356" r_length="346" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="359" polyA_stop="377"/>
      <MATCH_line gen_id="C06SLe0045F21.1" gen_strand="+" ref_id="SGN-U333249" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>346</cumulative_length_of_scored_exons>
        <coverage percentage="0.918" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLe0045F21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U333249" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="98650" e_stop="98995"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTGTTCAATTAGGGAATCTTGGTGGAACTGATAAAGTTGTCGCCATATGAGGGTGAGAATGCATACAAATAGACCCTTGCAGTCTGGCTCTTTTTTCGGACTCCTCACATAGTGAGAACTTAGTGTATCGAGTTGCCATTCCTATCAATTGCTGTGATTTGTTATGCCGTGCATCAAACGAAGGGATTGAGAGTGATTGGGCTCAGCCTCAATGTAAATAGTTAGTCGCCCATAGGCATACTTTCAAGTTTAAGATATAATACTGTTACAATGCAGAATTTCGTATGGGGATGTACTTATTTTAGGGTCCGTTTGGATGGGCTTAATAAAAGCAGCTTTAAAAAA</genome_strand>
        <mrna_strand>GTTGTTCAATTAGGGAATCTTGGTGGAACTGATAAAGTTGTCGCCATATGAGGGTGAGAATGCATACAAATAGACCCTTGCAGTCTGGCTCTTTTTTCGGACTCCTCACATAGTGAGAACTTAGTGTATCGAGTTGCCATTCCTATCAATTGCTGTGATTTGTTATGCCGTGCATCAAACGAAGGGATTGAGAGTGATTGGGCTCAGCCTCAATGTAAATAGTTAGTCGCCCATAGGCATACTTTCAAGTTTAAGATATAATACTGTTACAATGCAGAATTTCGTATGGGGATGTACTTATTTTAGGGTCCGTTTGGATGGGCTTAATAAAAGCAGCTTTAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLe0045F21-xnYek/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U330394" ref_strand="+" ref_description="SGN-U330394        Tomato 200607 #1 [2 ESTs aligned]">
      <seq>ccaggcatgatgaggatgccccgcaaagcagcacttatatgatcgtggggtcgaaagagactagtcatgctgctgttgatgtcagtgggccactggatgaacggcatgatgtcccatctccagttaatgaaagaagagataccctgaagtctaatgtgctggctgagtttaataaagctggagatgattccgtgtcagggtctaagacattgaagaaaagatcactttccaagaagacactcggatctagacaaagtctcggtaaaggggatggcagaaatcagaaaggttctttactcattaacaagactgttctgacgaatgattcagctgcttccagtagtggagggagagaggagacagaacaccaaaatatcttaagctctacaaagggtgaggttctgcctgcagataatgctaattcgagcaaggagatcgagaaaaatgattttttgaattctgaaaaagaatctgccaaaacaaatgaatccctaaatgatgatactgaggctccagaggaccaagaagatgaagaattaaatgtcctaagagagaagtctactggtactgaagcacaacat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLe0045F21-xnYek/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06SLe0045F21.1" temp_strand="+" temp_description="C06SLe0045F21.1  AC216658.1 htgs_phase:1 submitted_to_sgn_as:C06SLe0045F21 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="105416" stop="106597"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="105716" g_stop="106297" g_length="582"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="581" r_length="581" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLe0045F21.1" gen_strand="+" ref_id="SGN-U330394" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>582</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLe0045F21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U330394" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="105716" e_stop="106297"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAGGGCATGATGAGGATGCCCCGCAAAGCAGCACTTATATGATCGTGGGGTCGAAAGAGACTAGTCATGCTGCTGTTGATGTCAGTGGGCCACTGGATGAACGGCATGATGTCCCATCTCCAGTTAATGAAAGAAGAGATACCCTGAAGTCTAATGTGCTGGCTGAGTTTAATAAAGCTGGAGATGATTCCGTGTCAGGGTCTAAGACATTGAAGAAAAGATCACTTTCCAAGAAGACACTCGGATCTAGACAAAGTCTCGGTAAAGGGGATGGCAGAAATCAGAAAGGTTCTTTACTCATTAACAAGACTGTTCTGACGAATGATTCAGCTGCTTCCAGTAGTGGAGGGAGAGAGGAGACAGAACACCAAAATATCTTAAGCTCTACAAAGGGTGAGGTTCTGCCTGCAGATAATGCTAATTCGAGCAAGGAGATCGAGAGAAATGATTTTTTGAATTCTGAAAAAGAATCTGCCAAAACAAATGAATCCCTAAATGATGATACTGAGGCTCCAGAGGACCAAGAAGATGAAGAATTAAATGTCCTAAGAGAGAAGTCTACTGGTACTGAAGCACAACAT</genome_strand>
        <mrna_strand>CCA-GGCATGATGAGGATGCCCCGCAAAGCAGCACTTATATGATCGTGGGGTCGAAAGAGACTAGTCATGCTGCTGTTGATGTCAGTGGGCCACTGGATGAACGGCATGATGTCCCATCTCCAGTTAATGAAAGAAGAGATACCCTGAAGTCTAATGTGCTGGCTGAGTTTAATAAAGCTGGAGATGATTCCGTGTCAGGGTCTAAGACATTGAAGAAAAGATCACTTTCCAAGAAGACACTCGGATCTAGACAAAGTCTCGGTAAAGGGGATGGCAGAAATCAGAAAGGTTCTTTACTCATTAACAAGACTGTTCTGACGAATGATTCAGCTGCTTCCAGTAGTGGAGGGAGAGAGGAGACAGAACACCAAAATATCTTAAGCTCTACAAAGGGTGAGGTTCTGCCTGCAGATAATGCTAATTCGAGCAAGGAGATCGAGAAAAATGATTTTTTGAATTCTGAAAAAGAATCTGCCAAAACAAATGAATCCCTAAATGATGATACTGAGGCTCCAGAGGACCAAGAAGATGAAGAATTAAATGTCCTAAGAGAGAAGTCTACTGGTACTGAAGCACAACAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLe0045F21-xnYek/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U345866" ref_strand="+" ref_description="SGN-U345866        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: | Symbol: None | BRCT domain-containing protein, contains Pfam domain, PF00533: BRCA1 C Terminus (BRCT) domain | chr4:935191-940191 FORWARD | Aliases: T10M13.12, T10M13_12(evalue: 2e-23, score=106) genbank/nr: BRCA1(evalue: 1e-23, score=113)">
      <seq>tcttgaatacagattatttaactgcttctgttgaggctggaaaattattagatgaggagccatatgaatggcacaaaaagggatttactgaagacttagcaatcaacttagaggccccaagaaagtggcgacttctgagggagaggactggacatggcgcattatatggaatgaagataatcatttatggagactgcattgtaccaccattggtatggtaacttgttgtttgctgtatatgtttttgaagatttgagttcctatgctgcctatttgcaagaatttctttttcttccatcaactctttttacggtgtgttttgtatgacgaagaactattttctggaacttctttgatgaaatcatattctagtagttggtttccttgtattatggaaaaacaatttctcctaacatggcatattccaccgaaggggaaaatgacttgcatttgggtgcaggtaaattttctttataaaacgtaattctatcattattcttacaaagcataaattttactcatattacttaaacatgtagaacgtctttctttagtactaaaaaattatcaccagaacactattttaatattaaacccaacatcttgtgcggccagcggcatcatatgtcatgtacttttatccccaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLe0045F21-xnYek/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06SLe0045F21.1" temp_strand="+" temp_description="C06SLe0045F21.1  AC216658.1 htgs_phase:1 submitted_to_sgn_as:C06SLe0045F21 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="107004" stop="108251"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="107304" g_stop="107951" g_length="648"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="648" r_length="648" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLe0045F21.1" gen_strand="+" ref_id="SGN-U345866" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>648</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLe0045F21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U345866" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="107304" e_stop="107951"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTTGAATACAGATTATTTAACTGCTTCTGTTGAGGCTGGAAAATTATTAGATGAGGAGCCATATGAATGGCACAAAAAGGGATTTACTGAAGACTTAGCAATCAACTTAGAGGCCCCAAGAAAGTGGCGACTTCTGAGGGAGAGGACTGGACATGGCGCATTATATGGAATGAAGATAATCATTTATGGAGACTGCATTGTACCACCATTGGTATGGTAACTTGTTGTTTGCTGTATATGTTTTTGAAGATTTGAGTTCCTATGCTGCCTATTTGCAAGAATTTCTTTTTCTTCCATCAACTCTTTTTACGGTGTGTTTTGTATGACGAAGAACTATTTTCTGGAACTTCTTTGATGAAATCATATTCTAGTAGTTGGTTTCCTTGTATTATGGAAAAACAATTTCTCCTAACATGGCATATTCCACCGAAGGGGAAAATGACTTGCATTTGGGTGCAGGTAAATTTTCTTTATAAAACGTAATTCTATCATTATTCTTACAAAGCATAAATTTTACTCATATTACTTAAACATGTAGAACGTCTTTCTTTAGTACTAAAAAATTATCACCAGAACACTATTTTAATATTAAACCCAACATCTTGTGCGGCCAGCGGCATCATATGTCATGTACTTTTATCCCCAAT</genome_strand>
        <mrna_strand>TCTTGAATACAGATTATTTAACTGCTTCTGTTGAGGCTGGAAAATTATTAGATGAGGAGCCATATGAATGGCACAAAAAGGGATTTACTGAAGACTTAGCAATCAACTTAGAGGCCCCAAGAAAGTGGCGACTTCTGAGGGAGAGGACTGGACATGGCGCATTATATGGAATGAAGATAATCATTTATGGAGACTGCATTGTACCACCATTGGTATGGTAACTTGTTGTTTGCTGTATATGTTTTTGAAGATTTGAGTTCCTATGCTGCCTATTTGCAAGAATTTCTTTTTCTTCCATCAACTCTTTTTACGGTGTGTTTTGTATGACGAAGAACTATTTTCTGGAACTTCTTTGATGAAATCATATTCTAGTAGTTGGTTTCCTTGTATTATGGAAAAACAATTTCTCCTAACATGGCATATTCCACCGAAGGGGAAAATGACTTGCATTTGGGTGCAGGTAAATTTTCTTTATAAAACGTAATTCTATCATTATTCTTACAAAGCATAAATTTTACTCATATTACTTAAACATGTAGAACGTCTTTCTTTAGTACTAAAAAATTATCACCAGAACACTATTTTAATATTAAACCCAACATCTTGTGCGGCCAGCGGCATCATATGTCATGTACTTTTATCCCCAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLe0045F21-xnYek/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U343580" ref_strand="+" ref_description="SGN-U343580        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: | Symbol: None | replication control protein, putative, similar to origin recognition complex subunit 1 (Replication control protein 1) (Homo sapiens) SWISS-PROT:Q13415 | chr4:8422226-8424755 FORWARD | Aliases: DL3390W, FCAALL.93(evalue: 6e-06, score=48.5) genbank/nr: BRCA1(evalue: 7e-30, score=134)">
      <seq>agcaattatgtgcaatacaacactcattcctgggcggaaagatcactgaaaaaacatgtcaatcgtttggaagagattgttgaggagatggagccatcagatgacagtagtaatgatattgcatgccaggtgtgtgggtcgcctgacaggggtgaagtaatgctgatctgtggtgacgaaagtggctctcttggatgtggcattggcatgcatgtagattgctgtgatcctccccttgaatgtatacccgaggaagactggttttgcccagagtgtagcaagaacatgagtaatacaagtaccaaaaggaagtccaaaaaagggacgtctacatcaaagaagaagaagaagtgataatgtgtctgttggctaaggtctgtataatagcttcactcaagttaagtatatttagattagtgaagtaaaatgtacaaaaataattattcacatagcagcatcttgctgcttttgttgaagaagttgattttcaaagttgtgtaaaatcatctcttgagacatccaatgcaggctgagccctggatcacatttgcctagtgtagatgaaactttttatttcacccctttaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLe0045F21-xnYek/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06SLe0045F21.1" temp_strand="+" temp_description="C06SLe0045F21.1  AC216658.1 htgs_phase:1 submitted_to_sgn_as:C06SLe0045F21 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="108053" stop="109238"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="108353" g_stop="108937" g_length="585"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="585" r_length="585" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="586" polyA_stop="598"/>
      <MATCH_line gen_id="C06SLe0045F21.1" gen_strand="+" ref_id="SGN-U343580" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>585</cumulative_length_of_scored_exons>
        <coverage percentage="0.978" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLe0045F21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U343580" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="108353" e_stop="108937"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGCAATTATGTGCAATACAACACTCATTCCTGGGCGGAAAGATCACTGAAAAAACATGTCAATCGTTTGGAAGAGATTGTTGAGGAGATGGAGCCATCAGATGACAGTAGTAATGATATTGCATGCCAGGTGTGTGGGTCGCCTGACAGGGGTGAAGTAATGCTGATCTGTGGTGACGAAAGTGGCTCTCTTGGATGTGGCATTGGCATGCATGTAGATTGCTGTGATCCTCCCCTTGAATGTATACCCGAGGAAGACTGGTTTTGCCCAGAGTGTAGCAAGAACATGAGTAATACAAGTACCAAAAGGAAGTCCAAAAAAGGGACGTCTACATCAAAGAAGAAGAAGAAGTGATAATGTGTCTGTTGGCTAAGGTCTGTATAATAGCTTCACTCAAGTTAAGTATATTTAGATTAGTGAAGTAAAATGTACAAAAATAATTATTCACATAGCAGCATCTTGCTGCTTTTGTTGAAGAAGTTGATTTTCAAAGTTGTGTAAAATCATCTCTTGAGACATCCAATGCAGGCTGAGCCCTGGATCACATTTGCCTAGTGTAGATGAAACTTTTTATTTCACCCCTTC</genome_strand>
        <mrna_strand>AGCAATTATGTGCAATACAACACTCATTCCTGGGCGGAAAGATCACTGAAAAAACATGTCAATCGTTTGGAAGAGATTGTTGAGGAGATGGAGCCATCAGATGACAGTAGTAATGATATTGCATGCCAGGTGTGTGGGTCGCCTGACAGGGGTGAAGTAATGCTGATCTGTGGTGACGAAAGTGGCTCTCTTGGATGTGGCATTGGCATGCATGTAGATTGCTGTGATCCTCCCCTTGAATGTATACCCGAGGAAGACTGGTTTTGCCCAGAGTGTAGCAAGAACATGAGTAATACAAGTACCAAAAGGAAGTCCAAAAAAGGGACGTCTACATCAAAGAAGAAGAAGAAGTGATAATGTGTCTGTTGGCTAAGGTCTGTATAATAGCTTCACTCAAGTTAAGTATATTTAGATTAGTGAAGTAAAATGTACAAAAATAATTATTCACATAGCAGCATCTTGCTGCTTTTGTTGAAGAAGTTGATTTTCAAAGTTGTGTAAAATCATCTCTTGAGACATCCAATGCAGGCTGAGCCCTGGATCACATTTGCCTAGTGTAGATGAAACTTTTTATTTCACCCCTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>18</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="-" PGL_start="3856" PGL_stop="559"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="3856" e_stop="3601"/>
            <exon e_start="1525" e_stop="1429"/>
            <exon e_start="1303" e_stop="990"/>
            <exon e_start="711" e_stop="559"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.971" e_score="0.980"/>
          <exon-intron don_prob="0.880" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.999" e_score="0.984"/>
          <exon-only e_score="0.980"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.980">
            <gDNA_exon_boundary e_start="3856" e_stop="3601" e_length="256"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.971">
            <gDNA_intron_boundary i_start="3600" i_stop="1526" i_length="2075"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="1525" e_stop="1429" e_length="97"/>
          </exon>
          <intron i_serial="2" don_prob="0.880" acc_prob="0.998">
            <gDNA_intron_boundary i_start="1428" i_stop="1304" i_length="125"/>
          </intron>
          <exon e_serial="3" e_score="0.984">
            <gDNA_exon_boundary e_start="1303" e_stop="990" e_length="314"/>
          </exon>
          <intron i_serial="3" don_prob="0.995" acc_prob="0.999">
            <gDNA_intron_boundary i_start="989" i_stop="712" i_length="278"/>
          </intron>
          <exon e_serial="4" e_score="0.980">
            <gDNA_exon_boundary e_start="711" e_stop="559" e_length="153"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="3856" stop="3601"/>
              <exon start="1525" stop="1429"/>
              <exon start="1303" stop="990"/>
              <exon start="711" stop="559"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U336426" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ATCGATTATCGAGTTGAGTTCAGAATTTCGATTCACCGGAGCTATGTCACTGAGGCCGAACTCGAGAACGGAGGCTCGCCGGAGCAGGTACAAAGTTGCCGTCGATGCGGAGGAAGGACGGAGAAGAAGGGAAGATAACATGGTTGAGATCCGGAAGAATAAAAGAGAAGAGAATTTGCTTAAGAAGCGTCGTGAAGGTTTACTACAAGCTCAGCAGTTTCCTAGCACTGCTGCTGTTTCTCACCTTGATAAGAAG : CTGGAGACTCTTCCTGAATTGATTGCTGGGGTTTGGTCTGATGACAGCAGTTTGCAACTTGAATGTACAACACAATTCCGGAAACTGCTTTCAATTG : AACGCAATCCTCCTATAGAGGAAGTGATACAGTCTGGGGTAGTTCCTCGCTTTGTTGAATTTCTTGCTCGAGATGACTATCCTCAACTGCAGGTTTTTTTACAAAATCTATTATTTTTGTTTTTTGTTTTGCAGTTCCATCTTTATTTCTAATGTTTACATAATTGGCATTCTATAATCTAGTTTGAGGCAGCGTGGGCTCTTACAAATATTGCATCTGGTACATCAGAAAACACTAAAGTTGTGATTGATTATGGTTCTGTCCCAATTTTCATCAGACTTCTAAGTTCACCAAGTGATGATGTCCGTGAACAG : GCCGTTTGGGCTTTGGGAAATATTGCTGGTGACTCGCCCAAGTATCGTGACCTTGTGCTTGGCCATGGAGCTTTAGTGGCATTGCTGGCACAATTTAATGAGCAGGCAAAGCTATCTATGTTGAGAAATGCTACCTGGACATTGTCAAACTTT</gDNA_template>
            <first_frame> I  D  Y  R  V  E  F  R  I  S  I  H  R  S  Y  V  T  E  A  E  L  E  N  G  G  S  P  E  Q  V  Q  S  C  R  R  C  G  G  R  T  E  K  K  G  R  *  H  G  *  D  P  E  E  *  K  R  R  E  F  A  *  E  A  S  *  R  F  T  T  S  S  A  V  S  *  H  C  C  C  F  S  P  *  *  E   : A  G  D  S  S  *  I  D  C  W  G  L  V  *  *  Q  Q  F  A  T  *  M  Y  N  T  I  P  E  T  A  F  N  * :   T  Q  S  S  Y  R  G  S  D  T  V  W  G  S  S  S  L  C  *  I  S  C  S  R  *  L  S  S  T  A  G  F  F  T  K  S  I  I  F  V  F  C  F  A  V  P  S  L  F  L  M  F  T  *  L  A  F  Y  N  L  V  *  G  S  V  G  S  Y  K  Y  C  I  W  Y  I  R  K  H  *  S  C  D  *  L  W  F  C  P  N  F  H  Q  T  S  K  F  T  K  *  *  C  P  *  T   : G  R  L  G  F  G  K  Y  C  W  *  L  A  Q  V  S  *  P  C  A  W  P  W  S  F  S  G  I  A  G  T  I  *  *  A  G  K  A  I  Y  V  E  K  C  Y  L  D  I  V  K  L  </first_frame>
            <second_frame>  S  I  I  E  L  S  S  E  F  R  F  T  G  A  M  S  L  R  P  N  S  R  T  E  A  R  R  S  R  Y  K  V  A  V  D  A  E  E  G  R  R  R  R  E  D  N  M  V  E  I  R  K  N  K  R  E  E  N  L  L  K  K  R  R  E  G  L  L  Q  A  Q  Q  F  P  S  T  A  A  V  S  H  L  D  K  K  :  L  E  T  L  P  E  L  I  A  G  V  W  S  D  D  S  S  L  Q  L  E  C  T  T  Q  F  R  K  L  L  S  I   : E  R  N  P  P  I  E  E  V  I  Q  S  G  V  V  P  R  F  V  E  F  L  A  R  D  D  Y  P  Q  L  Q  V  F  L  Q  N  L  L  F  L  F  F  V  L  Q  F  H  L  Y  F  *  C  L  H  N  W  H  S  I  I  *  F  E  A  A  W  A  L  T  N  I  A  S  G  T  S  E  N  T  K  V  V  I  D  Y  G  S  V  P  I  F  I  R  L  L  S  S  P  S  D  D  V  R  E  Q  :  A  V  W  A  L  G  N  I  A  G  D  S  P  K  Y  R  D  L  V  L  G  H  G  A  L  V  A  L  L  A  Q  F  N  E  Q  A  K  L  S  M  L  R  N  A  T  W  T  L  S  N  F </second_frame>
            <third_frame>   R  L  S  S  *  V  Q  N  F  D  S  P  E  L  C  H  *  G  R  T  R  E  R  R  L  A  G  A  G  T  K  L  P  S  M  R  R  K  D  G  E  E  G  K  I  T  W  L  R  S  G  R  I  K  E  K  R  I  C  L  R  S  V  V  K  V  Y  Y  K  L  S  S  F  L  A  L  L  L  F  L  T  L  I  R  S :   W  R  L  F  L  N  *  L  L  G  F  G  L  M  T  A  V  C  N  L  N  V  Q  H  N  S  G  N  C  F  Q  L  :  N  A  I  L  L  *  R  K  *  Y  S  L  G  *  F  L  A  L  L  N  F  L  L  E  M  T  I  L  N  C  R  F  F  Y  K  I  Y  Y  F  C  F  L  F  C  S  S  I  F  I  S  N  V  Y  I  I  G  I  L  *  S  S  L  R  Q  R  G  L  L  Q  I  L  H  L  V  H  Q  K  T  L  K  L  *  L  I  M  V  L  S  Q  F  S  S  D  F  *  V  H  Q  V  M  M  S  V  N  R :   P  F  G  L  W  E  I  L  L  V  T  R  P  S  I  V  T  L  C  L  A  M  E  L  *  W  H  C  W  H  N  L  M  S  R  Q  S  Y  L  C  *  E  M  L  P  G  H  C  Q  T   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06SLe0045F21.1" strand="-"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="3855" stop="3601"/>
                    <exon start="1525" stop="1429"/>
                    <exon start="1303" stop="1152"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>501</number_coding_nucleotides>
                  <number_encoded_amino_acids>167</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SIIELSSEFRFTGAMSLRPNSRTEARRSRYKVAVDAEEGRRRREDNMVEIRKNKREENLLKKRREGLLQAQQFPSTAAVSHLDKKLETLPELIAGVWSDDSSLQLECTTQFRKLLSIERNPPIEEVIQSGVVPRFVEFLARDDYPQLQVFLQNLLFLFFVLQFHLYF*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06SLe0045F21.1" strand="-"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="1121" stop="990"/>
                    <exon start="711" stop="559"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>285</number_coding_nucleotides>
                  <number_encoded_amino_acids>95</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FEAAWALTNIASGTSENTKVVIDYGSVPIFIRLLSSPSDDVREQAVWALGNIAGDSPKYRDLVLGHGALVALLAQFNEQAKLSMLRNATWTLSNF</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="-" PGL_start="21063" PGL_stop="20043"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="21063" e_stop="20934"/>
            <exon e_start="20841" e_stop="20043"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="1.000" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="21063" e_stop="20934" e_length="130"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="1.000">
            <gDNA_intron_boundary i_start="20933" i_stop="20842" i_length="92"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="20841" e_stop="20043" e_length="799"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21063" stop="20934"/>
              <exon start="20841" stop="20043"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U328746" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GGTTATTAAGATGTGGAAAAAGTTGTAGACTCAGATGGATTAATTATTTGAAGAGTGATTTGAAGAGAGGTAACATAACCTCTGATGAAGAAGCTATAATCATCAAGTTACGTGCAACTTTGGGTAACAG : GTGGTCTCTGATAGCAGAACATTTACCTGGTAGAACAGACAATGAAATAAAAAACTATTGGAATTCTCATTTGAGACGAAAGGTGGATAGCTTTAGAATTCCAGGTGATGAGAAGCTACCACAAGCAGTTGTTGAATTAGCTAAAAAAGGAACACAAGTAAAACATATTACCAAACGAGGACGCAGTAGAAGAAAAATAATTACTAGAGTGTCAAATTCTACGAATGAAAATATCGAGTTTGATCATATTGATGACCAGATGTTATGGCATGACGATATTGTGCCGATGGACGCTAACTATGAAGTGCTAGATCAAGATTTTATTACAAATTGTTTATGGGACGATCAAGGAGAAAATCTCGAAATAACTGATGATAATGATAATAATAATAATAATAATGAAATCTTAAGTGAGGATAATTATGGTAAGTGGGATTGGGAATATTTAAGTGAAATATTGAATAATGAAATATGTGGAAATAGTACTAAAGAAACAGAGCAAAATAATAATAATAATAATATGTCATTATGTGACATTAATGACAATGTGCAGAACTGCATGAACAAAGAAGCAACACAAGAAAATATTGATCCCATGCAGAGTGATTTGGTAGCTTGGCTTTTGTCTTAATTTTGGAAGTATTACAATTAAGGAGATAATTTATATTATTTATTCCACAAAAATAAAGATCAAATTATGTATATTACTTTCTTTTTTTTTCTTTTCAAATTTCATTTATGAGATGAAAATATAATATGTTATTAGTGTGGTAGAAATAGACTAGGCATGTACAGTGGG</gDNA_template>
            <first_frame> G  Y  *  D  V  E  K  V  V  D  S  D  G  L  I  I  *  R  V  I  *  R  E  V  T  *  P  L  M  K  K  L  *  S  S  S  Y  V  Q  L  W  V  T   : G  G  L  *  *  Q  N  I  Y  L  V  E  Q  T  M  K  *  K  T  I  G  I  L  I  *  D  E  R  W  I  A  L  E  F  Q  V  M  R  S  Y  H  K  Q  L  L  N  *  L  K  K  E  H  K  *  N  I  L  P  N  E  D  A  V  E  E  K  *  L  L  E  C  Q  I  L  R  M  K  I  S  S  L  I  I  L  M  T  R  C  Y  G  M  T  I  L  C  R  W  T  L  T  M  K  C  *  I  K  I  L  L  Q  I  V  Y  G  T  I  K  E  K  I  S  K  *  L  M  I  M  I  I  I  I  I  I  M  K  S  *  V  R  I  I  M  V  S  G  I  G  N  I  *  V  K  Y  *  I  M  K  Y  V  E  I  V  L  K  K  Q  S  K  I  I  I  I  I  I  C  H  Y  V  T  L  M  T  M  C  R  T  A  *  T  K  K  Q  H  K  K  I  L  I  P  C  R  V  I  W  *  L  G  F  C  L  N  F  G  S  I  T  I  K  E  I  I  Y  I  I  Y  S  T  K  I  K  I  K  L  C  I  L  L  S  F  F  F  F  S  N  F  I  Y  E  M  K  I  *  Y  V  I  S  V  V  E  I  D  *  A  C  T  V   </first_frame>
            <second_frame>  V  I  K  M  W  K  K  L  *  T  Q  M  D  *  L  F  E  E  *  F  E  E  R  *  H  N  L  *  *  R  S  Y  N  H  Q  V  T  C  N  F  G  *  Q  :  V  V  S  D  S  R  T  F  T  W  *  N  R  Q  *  N  K  K  L  L  E  F  S  F  E  T  K  G  G  *  L  *  N  S  R  *  *  E  A  T  T  S  S  C  *  I  S  *  K  R  N  T  S  K  T  Y  Y  Q  T  R  T  Q  *  K  K  N  N  Y  *  S  V  K  F  Y  E  *  K  Y  R  V  *  S  Y  *  *  P  D  V  M  A  *  R  Y  C  A  D  G  R  *  L  *  S  A  R  S  R  F  Y  Y  K  L  F  M  G  R  S  R  R  K  S  R  N  N  *  *  *  *  *  *  *  *  *  *  *  N  L  K  *  G  *  L  W  *  V  G  L  G  I  F  K  *  N  I  E  *  *  N  M  W  K  *  Y  *  R  N  R  A  K  *  *  *  *  *  Y  V  I  M  *  H  *  *  Q  C  A  E  L  H  E  Q  R  S  N  T  R  K  Y  *  S  H  A  E  *  F  G  S  L  A  F  V  L  I  L  E  V  L  Q  L  R  R  *  F  I  L  F  I  P  Q  K  *  R  S  N  Y  V  Y  Y  F  L  F  F  S  F  Q  I  S  F  M  R  *  K  Y  N  M  L  L  V  W  *  K  *  T  R  H  V  Q  W  </second_frame>
            <third_frame>   L  L  R  C  G  K  S  C  R  L  R  W  I  N  Y  L  K  S  D  L  K  R  G  N  I  T  S  D  E  E  A  I  I  I  K  L  R  A  T  L  G  N  R :   W  S  L  I  A  E  H  L  P  G  R  T  D  N  E  I  K  N  Y  W  N  S  H  L  R  R  K  V  D  S  F  R  I  P  G  D  E  K  L  P  Q  A  V  V  E  L  A  K  K  G  T  Q  V  K  H  I  T  K  R  G  R  S  R  R  K  I  I  T  R  V  S  N  S  T  N  E  N  I  E  F  D  H  I  D  D  Q  M  L  W  H  D  D  I  V  P  M  D  A  N  Y  E  V  L  D  Q  D  F  I  T  N  C  L  W  D  D  Q  G  E  N  L  E  I  T  D  D  N  D  N  N  N  N  N  N  E  I  L  S  E  D  N  Y  G  K  W  D  W  E  Y  L  S  E  I  L  N  N  E  I  C  G  N  S  T  K  E  T  E  Q  N  N  N  N  N  N  M  S  L  C  D  I  N  D  N  V  Q  N  C  M  N  K  E  A  T  Q  E  N  I  D  P  M  Q  S  D  L  V  A  W  L  L  S  *  F  W  K  Y  Y  N  *  G  D  N  L  Y  Y  L  F  H  K  N  K  D  Q  I  M  Y  I  T  F  F  F  F  L  F  K  F  H  L  *  D  E  N  I  I  C  Y  *  C  G  R  N  R  L  G  M  Y  S  G </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06SLe0045F21.1" strand="-"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="21061" stop="20934"/>
                    <exon start="20841" stop="20211"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>756</number_coding_nucleotides>
                  <number_encoded_amino_acids>252</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LLRCGKSCRLRWINYLKSDLKRGNITSDEEAIIIKLRATLGNRWSLIAEHLPGRTDNEIKNYWNSHLRRKVDSFRIPGDEKLPQAVVELAKKGTQVKHITKRGRSRRKIITRVSNSTNENIEFDHIDDQMLWHDDIVPMDANYEVLDQDFITNCLWDDQGENLEITDDNDNNNNNNEILSEDNYGKWDWEYLSEILNNEICGNSTKETEQNNNNNNMSLCDINDNVQNCMNKEATQENIDPMQSDLVAWLLS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="+" PGL_start="33629" PGL_stop="34182"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="33629" e_stop="34182"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.917"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.917">
            <gDNA_exon_boundary e_start="33629" e_stop="34182" e_length="554"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33629" stop="34182"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U335931" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ACCTGGCCCATCTGGTACTAGGGCGGTGACTCCTCCACCGACTGAGGAAGTGTTAAGAGAGGGTGAGGAAGGGGAAAATGAGCAAGTGCAGAATGAGAAATTACCACCCCAACCTACCCCAGAGATGATTAATCAGGTTCTTGCTTATCTTAGCGGGTTATCTGATCAGGGCCAGACCCCTCCAGTGTTTTCTGCACCAGCACATCAGGTTACGGAGGTACCACATGCAGCTACTGTGGCTCCCTGCATGGATGCCTCATTGGGAATAGACACGTTTCCTCGGTTGACTACAGGGCCTATAATGACAAGTGATCAGCATGAACTTTTCAGTAAGTTCTTGAAATTGAAACCCCCAGTCTTCAAGGGTGCTGAATCTGAGGATGCCTATGATTTTCTAGTTGATTGTCATGAGCTACTACACAAGATGGGTATAGTAGAACGATTTGGCGTTGAGTTTGTGACTTATCAGTTTCAAGGGAACGCCAAAATGTGGTGGCGGTCACATGTTGAGTGTCAACCAACAGAGGCACCACCTATGACTTGGGCATCATTCT</gDNA_template>
            <first_frame> T  W  P  I  W  Y  *  G  G  D  S  S  T  D  *  G  S  V  K  R  G  *  G  R  G  K  *  A  S  A  E  *  E  I  T  T  P  T  Y  P  R  D  D  *  S  G  S  C  L  S  *  R  V  I  *  S  G  P  D  P  S  S  V  F  C  T  S  T  S  G  Y  G  G  T  T  C  S  Y  C  G  S  L  H  G  C  L  I  G  N  R  H  V  S  S  V  D  Y  R  A  Y  N  D  K  *  S  A  *  T  F  Q  *  V  L  E  I  E  T  P  S  L  Q  G  C  *  I  *  G  C  L  *  F  S  S  *  L  S  *  A  T  T  Q  D  G  Y  S  R  T  I  W  R  *  V  C  D  L  S  V  S  R  E  R  Q  N  V  V  A  V  T  C  *  V  S  T  N  R  G  T  T  Y  D  L  G  I  I   </first_frame>
            <second_frame>  P  G  P  S  G  T  R  A  V  T  P  P  P  T  E  E  V  L  R  E  G  E  E  G  E  N  E  Q  V  Q  N  E  K  L  P  P  Q  P  T  P  E  M  I  N  Q  V  L  A  Y  L  S  G  L  S  D  Q  G  Q  T  P  P  V  F  S  A  P  A  H  Q  V  T  E  V  P  H  A  A  T  V  A  P  C  M  D  A  S  L  G  I  D  T  F  P  R  L  T  T  G  P  I  M  T  S  D  Q  H  E  L  F  S  K  F  L  K  L  K  P  P  V  F  K  G  A  E  S  E  D  A  Y  D  F  L  V  D  C  H  E  L  L  H  K  M  G  I  V  E  R  F  G  V  E  F  V  T  Y  Q  F  Q  G  N  A  K  M  W  W  R  S  H  V  E  C  Q  P  T  E  A  P  P  M  T  W  A  S  F  </second_frame>
            <third_frame>   L  A  H  L  V  L  G  R  *  L  L  H  R  L  R  K  C  *  E  R  V  R  K  G  K  M  S  K  C  R  M  R  N  Y  H  P  N  L  P  Q  R  *  L  I  R  F  L  L  I  L  A  G  Y  L  I  R  A  R  P  L  Q  C  F  L  H  Q  H  I  R  L  R  R  Y  H  M  Q  L  L  W  L  P  A  W  M  P  H  W  E  *  T  R  F  L  G  *  L  Q  G  L  *  *  Q  V  I  S  M  N  F  S  V  S  S  *  N  *  N  P  Q  S  S  R  V  L  N  L  R  M  P  M  I  F  *  L  I  V  M  S  Y  Y  T  R  W  V  *  *  N  D  L  A  L  S  L  *  L  I  S  F  K  G  T  P  K  C  G  G  G  H  M  L  S  V  N  Q  Q  R  H  H  L  *  L  G  H  H  S </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06SLe0045F21.1" strand="+"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="33630" stop="34181"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>552</number_coding_nucleotides>
                  <number_encoded_amino_acids>184</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PGPSGTRAVTPPPTEEVLREGEEGENEQVQNEKLPPQPTPEMINQVLAYLSGLSDQGQTPPVFSAPAHQVTEVPHAATVAPCMDASLGIDTFPRLTTGPIMTSDQHELFSKFLKLKPPVFKGAESEDAYDFLVDCHELLHKMGIVERFGVEFVTYQFQGNAKMWWRSHVECQPTEAPPMTWASF</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="-" PGL_start="35310" PGL_stop="34980"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="35310" e_stop="34980"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.937"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.937">
            <gDNA_exon_boundary e_start="35310" e_stop="34980" e_length="331"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="35310" stop="34980"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U335937" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GATCTGTCCCAGGCTTGGCTAACGTCACAGTTTTAGCATTACAATCCAAGATTGCAAAATTTGGAGAAAGCCAAGTCATACCCAGAATTACATCGAATTCAACCATTTCTAAGATAACCAAGTCTACATGAGTATTGCTCCCCACAAAAGTCACAAGACAAGACCTATACACCCTTTCAACTATCACAGACTCACCCACCGGAGTAGAAACACGAATAGACATGTCAAGCAATTCACAATGTAAGTAAAGACCATTAGCAAATCAGGAAGATACATAAGAAAATGTGGATCCAGGATCAAACAATACAGAAGCCATGCAATCACAAACCAA</gDNA_template>
            <first_frame> D  L  S  Q  A  W  L  T  S  Q  F  *  H  Y  N  P  R  L  Q  N  L  E  K  A  K  S  Y  P  E  L  H  R  I  Q  P  F  L  R  *  P  S  L  H  E  Y  C  S  P  Q  K  S  Q  D  K  T  Y  T  P  F  Q  L  S  Q  T  H  P  P  E  *  K  H  E  *  T  C  Q  A  I  H  N  V  S  K  D  H  *  Q  I  R  K  I  H  K  K  M  W  I  Q  D  Q  T  I  Q  K  P  C  N  H  K  P  </first_frame>
            <second_frame>  I  C  P  R  L  G  *  R  H  S  F  S  I  T  I  Q  D  C  K  I  W  R  K  P  S  H  T  Q  N  Y  I  E  F  N  H  F  *  D  N  Q  V  Y  M  S  I  A  P  H  K  S  H  K  T  R  P  I  H  P  F  N  Y  H  R  L  T  H  R  S  R  N  T  N  R  H  V  K  Q  F  T  M  *  V  K  T  I  S  K  S  G  R  Y  I  R  K  C  G  S  R  I  K  Q  Y  R  S  H  A  I  T  N  Q </second_frame>
            <third_frame>   S  V  P  G  L  A  N  V  T  V  L  A  L  Q  S  K  I  A  K  F  G  E  S  Q  V  I  P  R  I  T  S  N  S  T  I  S  K  I  T  K  S  T  *  V  L  L  P  T  K  V  T  R  Q  D  L  Y  T  L  S  T  I  T  D  S  P  T  G  V  E  T  R  I  D  M  S  S  N  S  Q  C  K  *  R  P  L  A  N  Q  E  D  T  *  E  N  V  D  P  G  S  N  N  T  E  A  M  Q  S  Q  T   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C06SLe0045F21.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="+" PGL_start="35010" PGL_stop="35670"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="35010" e_stop="35670"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.905"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.905">
            <gDNA_exon_boundary e_start="35010" e_stop="35670" e_length="661"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="35010" stop="35670"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U335936" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTTGATCCTGGATCCACATTTTCTTATGTATCTTCCTGATTTGCTAATGGTCTTTACTTACATTGTGAATTGCTTGACATGTCTATTCGTGTTTCTACTCCGGTGGGTGAGTCTGTGATAGTTGAAAGGGTGTATAGGTCTTGTCTTGTGACTTTTGTGGGGAGCAATACTCATGTAGACTTGGTTATCTTAGAAATGGTTGAATTCGATGTAATTCTGGGTATGACTTGGCTTTCTCCAAATTTTGCAATCTTGGATTGTAATGCTAAAACTGTGACGTTAGCCAAGCCTGGGACAGATCCGTTAGTGTGGGAGGGTGACTACACTTCCAATCCGGTTTGTATCGTCTCCTTTCTTCGTGCTAAGAGAATGGTTAGTAAGGGTTGTTTAGCTTTCTTGGAACACCTCAAGGATGATACCACCCAAGTAATTTCAATTGAGTCGGTTTCGATAGTCCGCGAGTTTTTAGATGTGTTTCCTGCAGACCTTCCTGGTATGCCACCGGATAGAAATATTGACTTCTGCATCGATCTTGAACTGGGTACTCGCCCCATTTCTATACCCCCTTATAGAATGGCTCCCGCTGAGTTAAGGGAGTTAAAGGCCCAACTTCAAGAGTTGTTGAGCAAAGGCTTCATTAGATCAAGTACATCCCCTTGGG</gDNA_template>
            <first_frame> F  D  P  G  S  T  F  S  Y  V  S  S  *  F  A  N  G  L  Y  L  H  C  E  L  L  D  M  S  I  R  V  S  T  P  V  G  E  S  V  I  V  E  R  V  Y  R  S  C  L  V  T  F  V  G  S  N  T  H  V  D  L  V  I  L  E  M  V  E  F  D  V  I  L  G  M  T  W  L  S  P  N  F  A  I  L  D  C  N  A  K  T  V  T  L  A  K  P  G  T  D  P  L  V  W  E  G  D  Y  T  S  N  P  V  C  I  V  S  F  L  R  A  K  R  M  V  S  K  G  C  L  A  F  L  E  H  L  K  D  D  T  T  Q  V  I  S  I  E  S  V  S  I  V  R  E  F  L  D  V  F  P  A  D  L  P  G  M  P  P  D  R  N  I  D  F  C  I  D  L  E  L  G  T  R  P  I  S  I  P  P  Y  R  M  A  P  A  E  L  R  E  L  K  A  Q  L  Q  E  L  L  S  K  G  F  I  R  S  S  T  S  P  W  </first_frame>
            <second_frame>  L  I  L  D  P  H  F  L  M  Y  L  P  D  L  L  M  V  F  T  Y  I  V  N  C  L  T  C  L  F  V  F  L  L  R  W  V  S  L  *  *  L  K  G  C  I  G  L  V  L  *  L  L  W  G  A  I  L  M  *  T  W  L  S  *  K  W  L  N  S  M  *  F  W  V  *  L  G  F  L  Q  I  L  Q  S  W  I  V  M  L  K  L  *  R  *  P  S  L  G  Q  I  R  *  C  G  R  V  T  T  L  P  I  R  F  V  S  S  P  F  F  V  L  R  E  W  L  V  R  V  V  *  L  S  W  N  T  S  R  M  I  P  P  K  *  F  Q  L  S  R  F  R  *  S  A  S  F  *  M  C  F  L  Q  T  F  L  V  C  H  R  I  E  I  L  T  S  A  S  I  L  N  W  V  L  A  P  F  L  Y  P  L  I  E  W  L  P  L  S  *  G  S  *  R  P  N  F  K  S  C  *  A  K  A  S  L  D  Q  V  H  P  L  G </second_frame>
            <third_frame>   *  S  W  I  H  I  F  L  C  I  F  L  I  C  *  W  S  L  L  T  L  *  I  A  *  H  V  Y  S  C  F  Y  S  G  G  *  V  C  D  S  *  K  G  V  *  V  L  S  C  D  F  C  G  E  Q  Y  S  C  R  L  G  Y  L  R  N  G  *  I  R  C  N  S  G  Y  D  L  A  F  S  K  F  C  N  L  G  L  *  C  *  N  C  D  V  S  Q  A  W  D  R  S  V  S  V  G  G  *  L  H  F  Q  S  G  L  Y  R  L  L  S  S  C  *  E  N  G  *  *  G  L  F  S  F  L  G  T  P  Q  G  *  Y  H  P  S  N  F  N  *  V  G  F  D  S  P  R  V  F  R  C  V  S  C  R  P  S  W  Y  A  T  G  *  K  Y  *  L  L  H  R  S  *  T  G  Y  S  P  H  F  Y  T  P  L  *  N  G  S  R  *  V  K  G  V  K  G  P  T  S  R  V  V  E  Q  R  L  H  *  I  K  Y  I  P  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06SLe0045F21.1" strand="+"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="35049" stop="35669"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>621</number_coding_nucleotides>
                  <number_encoded_amino_acids>207</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FANGLYLHCELLDMSIRVSTPVGESVIVERVYRSCLVTFVGSNTHVDLVILEMVEFDVILGMTWLSPNFAILDCNAKTVTLAKPGTDPLVWEGDYTSNPVCIVSFLRAKRMVSKGCLAFLEHLKDDTTQVISIESVSIVREFLDVFPADLPGMPPDRNIDFCIDLELGTRPISIPPYRMAPAELRELKAQLQELLSKGFIRSSTSPW</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="+" PGL_start="54906" PGL_stop="57896"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="54906" e_stop="55164"/>
            <exon e_start="55791" e_stop="56179"/>
            <exon e_start="56285" e_stop="57896"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.990" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.998" e_score="0.997"/>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="54906" e_stop="55164" e_length="259"/>
          </exon>
          <intron i_serial="1" don_prob="0.990" acc_prob="0.994">
            <gDNA_intron_boundary i_start="55165" i_stop="55790" i_length="626"/>
          </intron>
          <exon e_serial="2" e_score="0.997">
            <gDNA_exon_boundary e_start="55791" e_stop="56179" e_length="389"/>
          </exon>
          <intron i_serial="2" don_prob="0.997" acc_prob="0.998">
            <gDNA_intron_boundary i_start="56180" i_stop="56284" i_length="105"/>
          </intron>
          <exon e_serial="3" e_score="0.997">
            <gDNA_exon_boundary e_start="56285" e_stop="57896" e_length="1612"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54906" stop="55164"/>
              <exon start="55791" stop="56179"/>
              <exon start="56285" stop="57896"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U331464" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATGAGTAGAGAGGTCTTTACAGAGAGAGATATATATTCTGGCGTGGTTTGCCAGCAATGAAACAGAAGGATCAAAAGCTCTCTGTTTCTCTCTCTCCAAAGCTGGCACTGTATATTCACGCACTTGCTCAATATTAATGTAAACAGAGATACCATTAACCAAATATCAAGAAAGTTCGATTCTTGATCCAACAATGGCTGCATCTCCTCCATTTCTTGCCTCTGCAGAAAAAAAGCCCTGGTGGGTTACCAACAAAAAG : ATTGTGGAAAGATATATCAGAGATGCCAAAATTCTTATAGCCACTCAAGAACCAAATGAGATTTCTTCAGCTCTTGCCCTTGTTGAAGCTGCGCTTGCAATTTCTCCGCGTTTTGAATTAGCCCTAGAGTTAAAGGCTCGATCTTTGCTTTATTTAAGGTGTTTTAAGGATGTAGCTTATATGCTAAAAGATTATATTCCTAGTCTGAAAATGCCTAGTGATGACACATCATCTACCTCTTCTTCTGGTTCATTTGATAGCTCAAAGGAGCAAATCAGCCTCATTTCTTATGGTGATGAACCTAACTTCAAGTGCTTCTCTATATCTTATTTGAAGAAGAAGGTTATGGCTAGTCTCTACAAGAATTGCAATAAAGAAGGTCAATGGAG : GTATTTGGTCTTAGGACAAGCTTGTTGCCATTTGGGCCTAATGGAAGACGCAATGGTTCTGTTACAAACTGGCAAACGCCTTGCTACAGATGCATTTCGACGTGAGAGCATTTGTTGGTCTGAGGATAGCTTCTCGTTTTCTAAATTTCCAATCTCAAGCAAAAATTGCTGTACAGCTTTGCAAATTACTGAGTCAGAAACAATATCTCAACTTCTCAGTCATATCAAACTACTCCTACGACGAAAAACTGCTGCAATTGCAGCTCTTGATGCTGGTCTTTACTCAGAAGCTATTAGGCATTTTTCAAAAATTGTGGATGGTCGTCGTGGTGCCCCTCAGGGGTTTATGGCTGAATGCTATATGCATCGAGCATCAGCGTATCATTCTTCTGGTCGAATTGCAGAGGCAATAGCTGATTGCAATCGAACGCTAGCATTGGACCCTTCTTGCATTGATGCTCTTAGAACTAGAGCTGCACTATTTGAAACCATAAGATGTTTGCCTGATAGTCTTCATGATTTGGAGCACTTAAAACTCTTGTACAATTCAATGCTACGGGATAGGAAACTACCAGGACCAATATGGAAGCGTCAAAATGTGGAATACAGGGAGATTCCAGGGAGACTTTGTTCCTTGGCTACAAAAATTCAAGAATTGAAGAAGAGGGTTGCAAATGGCGAAACGGGTAATGTGGATTACTATGCATTGATTGGTTTAAACTGGGGTTGTTCAAGATCAGAACTGGAAAGAGCACATTTGTTGCTAACTTTAAGGCACAAGCCTGACAAATCGACGAGTTTCATAGAAAGGTGTGAATTTGCAGATGAACAAGATGTAGATTCTGTAAGGGATAGAGCAAAGATGTCAGCTTTACTGCTCTATAGACTGATACAGAGGGGTTATGCTAGTTTGATGGCGACAATCAAGGACGAAGAAGCAGCTGAGAAGCAGAGAAAGAAAGCTGCTGCTGCATTGCAACTGATGCAGCAACAAGTTCAGCTAAATCAAGAACAACAACAATCAAGAAGTGAAACTTTTGGCACAGTTGTAATGCAGCAACAAGTTCAGAAAATTCAAGAACTTCAACGATCTGTACCTGAAACTCTTGATTCAGATGTGTGCAATACTGCATTATGTAGTAACACAAACATTACAAATGCGACAGTGTTCAAAGGGGCGTTCTGCAGAGAGCATGCGATAGTTGGGAATATGTTGTCTCAAGCTGGATTTAATCAACCAATTCCAGTGAAATATGAAGCATTGAGTTGTTGAATTTTAGGGGATTTTAGTAAGAGTTCTATAACGAAAAGAGAATAGTTTGAAATGTTATGCCACTGACTCAGCAGAATCTGAATCTGCTCCTATACCGACAAAGATTGTGGTGAGATAACTAGTCTCAGATTCAAGCCTTGGTATGGAAAAGAAATGTTGGGACCACTGCCTCCTTAAAAGGGCCTTACGCGGCGTGAATTCATATTAGCCCCAATGCATGTACTGGACACTGGGTGGGATACAAAAAAAGAAAAGAACTAGCTTCAATATCATTGTACACATGAGGAAGAAAAGTATTTACCACTGCTAGCTGGGAAAATTTTGTAGTTTTACCCATTT</gDNA_template>
            <first_frame> M  S  R  E  V  F  T  E  R  D  I  Y  S  G  V  V  C  Q  Q  *  N  R  R  I  K  S  S  L  F  L  S  L  Q  S  W  H  C  I  F  T  H  L  L  N  I  N  V  N  R  D  T  I  N  Q  I  S  R  K  F  D  S  *  S  N  N  G  C  I  S  S  I  S  C  L  C  R  K  K  A  L  V  G  Y  Q  Q  K   : D  C  G  K  I  Y  Q  R  C  Q  N  S  Y  S  H  S  R  T  K  *  D  F  F  S  S  C  P  C  *  S  C  A  C  N  F  S  A  F  *  I  S  P  R  V  K  G  S  I  F  A  L  F  K  V  F  *  G  C  S  L  Y  A  K  R  L  Y  S  *  S  E  N  A  *  *  *  H  I  I  Y  L  F  F  W  F  I  *  *  L  K  G  A  N  Q  P  H  F  L  W  *  *  T  *  L  Q  V  L  L  Y  I  L  F  E  E  E  G  Y  G  *  S  L  Q  E  L  Q  *  R  R  S  M  E  :  V  F  G  L  R  T  S  L  L  P  F  G  P  N  G  R  R  N  G  S  V  T  N  W  Q  T  P  C  Y  R  C  I  S  T  *  E  H  L  L  V  *  G  *  L  L  V  F  *  I  S  N  L  K  Q  K  L  L  Y  S  F  A  N  Y  *  V  R  N  N  I  S  T  S  Q  S  Y  Q  T  T  P  T  T  K  N  C  C  N  C  S  S  *  C  W  S  L  L  R  S  Y  *  A  F  F  K  N  C  G  W  S  S  W  C  P  S  G  V  Y  G  *  M  L  Y  A  S  S  I  S  V  S  F  F  W  S  N  C  R  G  N  S  *  L  Q  S  N  A  S  I  G  P  F  L  H  *  C  S  *  N  *  S  C  T  I  *  N  H  K  M  F  A  *  *  S  S  *  F  G  A  L  K  T  L  V  Q  F  N  A  T  G  *  E  T  T  R  T  N  M  E  A  S  K  C  G  I  Q  G  D  S  R  E  T  L  F  L  G  Y  K  N  S  R  I  E  E  E  G  C  K  W  R  N  G  *  C  G  L  L  C  I  D  W  F  K  L  G  L  F  K  I  R  T  G  K  S  T  F  V  A  N  F  K  A  Q  A  *  Q  I  D  E  F  H  R  K  V  *  I  C  R  *  T  R  C  R  F  C  K  G  *  S  K  D  V  S  F  T  A  L  *  T  D  T  E  G  L  C  *  F  D  G  D  N  Q  G  R  R  S  S  *  E  A  E  K  E  S  C  C  C  I  A  T  D  A  A  T  S  S  A  K  S  R  T  T  T  I  K  K  *  N  F  W  H  S  C  N  A  A  T  S  S  E  N  S  R  T  S  T  I  C  T  *  N  S  *  F  R  C  V  Q  Y  C  I  M  *  *  H  K  H  Y  K  C  D  S  V  Q  R  G  V  L  Q  R  A  C  D  S  W  E  Y  V  V  S  S  W  I  *  S  T  N  S  S  E  I  *  S  I  E  L  L  N  F  R  G  F  *  *  E  F  Y  N  E  K  R  I  V  *  N  V  M  P  L  T  Q  Q  N  L  N  L  L  L  Y  R  Q  R  L  W  *  D  N  *  S  Q  I  Q  A  L  V  W  K  R  N  V  G  T  T  A  S  L  K  G  P  Y  A  A  *  I  H  I  S  P  N  A  C  T  G  H  W  V  G  Y  K  K  R  K  E  L  A  S  I  S  L  Y  T  *  G  R  K  V  F  T  T  A  S  W  E  N  F  V  V  L  P  I  </first_frame>
            <second_frame>  *  V  E  R  S  L  Q  R  E  I  Y  I  L  A  W  F  A  S  N  E  T  E  G  S  K  A  L  C  F  S  L  S  K  A  G  T  V  Y  S  R  T  C  S  I  L  M  *  T  E  I  P  L  T  K  Y  Q  E  S  S  I  L  D  P  T  M  A  A  S  P  P  F  L  A  S  A  E  K  K  P  W  W  V  T  N  K  K  :  I  V  E  R  Y  I  R  D  A  K  I  L  I  A  T  Q  E  P  N  E  I  S  S  A  L  A  L  V  E  A  A  L  A  I  S  P  R  F  E  L  A  L  E  L  K  A  R  S  L  L  Y  L  R  C  F  K  D  V  A  Y  M  L  K  D  Y  I  P  S  L  K  M  P  S  D  D  T  S  S  T  S  S  S  G  S  F  D  S  S  K  E  Q  I  S  L  I  S  Y  G  D  E  P  N  F  K  C  F  S  I  S  Y  L  K  K  K  V  M  A  S  L  Y  K  N  C  N  K  E  G  Q  W  R :   Y  L  V  L  G  Q  A  C  C  H  L  G  L  M  E  D  A  M  V  L  L  Q  T  G  K  R  L  A  T  D  A  F  R  R  E  S  I  C  W  S  E  D  S  F  S  F  S  K  F  P  I  S  S  K  N  C  C  T  A  L  Q  I  T  E  S  E  T  I  S  Q  L  L  S  H  I  K  L  L  L  R  R  K  T  A  A  I  A  A  L  D  A  G  L  Y  S  E  A  I  R  H  F  S  K  I  V  D  G  R  R  G  A  P  Q  G  F  M  A  E  C  Y  M  H  R  A  S  A  Y  H  S  S  G  R  I  A  E  A  I  A  D  C  N  R  T  L  A  L  D  P  S  C  I  D  A  L  R  T  R  A  A  L  F  E  T  I  R  C  L  P  D  S  L  H  D  L  E  H  L  K  L  L  Y  N  S  M  L  R  D  R  K  L  P  G  P  I  W  K  R  Q  N  V  E  Y  R  E  I  P  G  R  L  C  S  L  A  T  K  I  Q  E  L  K  K  R  V  A  N  G  E  T  G  N  V  D  Y  Y  A  L  I  G  L  N  W  G  C  S  R  S  E  L  E  R  A  H  L  L  L  T  L  R  H  K  P  D  K  S  T  S  F  I  E  R  C  E  F  A  D  E  Q  D  V  D  S  V  R  D  R  A  K  M  S  A  L  L  L  Y  R  L  I  Q  R  G  Y  A  S  L  M  A  T  I  K  D  E  E  A  A  E  K  Q  R  K  K  A  A  A  A  L  Q  L  M  Q  Q  Q  V  Q  L  N  Q  E  Q  Q  Q  S  R  S  E  T  F  G  T  V  V  M  Q  Q  Q  V  Q  K  I  Q  E  L  Q  R  S  V  P  E  T  L  D  S  D  V  C  N  T  A  L  C  S  N  T  N  I  T  N  A  T  V  F  K  G  A  F  C  R  E  H  A  I  V  G  N  M  L  S  Q  A  G  F  N  Q  P  I  P  V  K  Y  E  A  L  S  C  *  I  L  G  D  F  S  K  S  S  I  T  K  R  E  *  F  E  M  L  C  H  *  L  S  R  I  *  I  C  S  Y  T  D  K  D  C  G  E  I  T  S  L  R  F  K  P  W  Y  G  K  E  M  L  G  P  L  P  P  *  K  G  L  T  R  R  E  F  I  L  A  P  M  H  V  L  D  T  G  W  D  T  K  K  E  K  N  *  L  Q  Y  H  C  T  H  E  E  E  K  Y  L  P  L  L  A  G  K  I  L  *  F  Y  P  F </second_frame>
            <third_frame>   E  *  R  G  L  Y  R  E  R  Y  I  F  W  R  G  L  P  A  M  K  Q  K  D  Q  K  L  S  V  S  L  S  P  K  L  A  L  Y  I  H  A  L  A  Q  Y  *  C  K  Q  R  Y  H  *  P  N  I  K  K  V  R  F  L  I  Q  Q  W  L  H  L  L  H  F  L  P  L  Q  K  K  S  P  G  G  L  P  T  K  R :   L  W  K  D  I  S  E  M  P  K  F  L  *  P  L  K  N  Q  M  R  F  L  Q  L  L  P  L  L  K  L  R  L  Q  F  L  R  V  L  N  *  P  *  S  *  R  L  D  L  C  F  I  *  G  V  L  R  M  *  L  I  C  *  K  I  I  F  L  V  *  K  C  L  V  M  T  H  H  L  P  L  L  L  V  H  L  I  A  Q  R  S  K  S  A  S  F  L  M  V  M  N  L  T  S  S  A  S  L  Y  L  I  *  R  R  R  L  W  L  V  S  T  R  I  A  I  K  K  V  N  G   : G  I  W  S  *  D  K  L  V  A  I  W  A  *  W  K  T  Q  W  F  C  Y  K  L  A  N  A  L  L  Q  M  H  F  D  V  R  A  F  V  G  L  R  I  A  S  R  F  L  N  F  Q  S  Q  A  K  I  A  V  Q  L  C  K  L  L  S  Q  K  Q  Y  L  N  F  S  V  I  S  N  Y  S  Y  D  E  K  L  L  Q  L  Q  L  L  M  L  V  F  T  Q  K  L  L  G  I  F  Q  K  L  W  M  V  V  V  V  P  L  R  G  L  W  L  N  A  I  C  I  E  H  Q  R  I  I  L  L  V  E  L  Q  R  Q  *  L  I  A  I  E  R  *  H  W  T  L  L  A  L  M  L  L  E  L  E  L  H  Y  L  K  P  *  D  V  C  L  I  V  F  M  I  W  S  T  *  N  S  C  T  I  Q  C  Y  G  I  G  N  Y  Q  D  Q  Y  G  S  V  K  M  W  N  T  G  R  F  Q  G  D  F  V  P  W  L  Q  K  F  K  N  *  R  R  G  L  Q  M  A  K  R  V  M  W  I  T  M  H  *  L  V  *  T  G  V  V  Q  D  Q  N  W  K  E  H  I  C  C  *  L  *  G  T  S  L  T  N  R  R  V  S  *  K  G  V  N  L  Q  M  N  K  M  *  I  L  *  G  I  E  Q  R  C  Q  L  Y  C  S  I  D  *  Y  R  G  V  M  L  V  *  W  R  Q  S  R  T  K  K  Q  L  R  S  R  E  R  K  L  L  L  H  C  N  *  C  S  N  K  F  S  *  I  K  N  N  N  N  Q  E  V  K  L  L  A  Q  L  *  C  S  N  K  F  R  K  F  K  N  F  N  D  L  Y  L  K  L  L  I  Q  M  C  A  I  L  H  Y  V  V  T  Q  T  L  Q  M  R  Q  C  S  K  G  R  S  A  E  S  M  R  *  L  G  I  C  C  L  K  L  D  L  I  N  Q  F  Q  *  N  M  K  H  *  V  V  E  F  *  G  I  L  V  R  V  L  *  R  K  E  N  S  L  K  C  Y  A  T  D  S  A  E  S  E  S  A  P  I  P  T  K  I  V  V  R  *  L  V  S  D  S  S  L  G  M  E  K  K  C  W  D  H  C  L  L  K  R  A  L  R  G  V  N  S  Y  *  P  Q  C  M  Y  W  T  L  G  G  I  Q  K  K  K  R  T  S  F  N  I  I  V  H  M  R  K  K  S  I  Y  H  C  *  L  G  K  F  C  S  F  T  H   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06SLe0045F21.1" strand="+"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="55048" stop="55164"/>
                    <exon start="55791" stop="56179"/>
                    <exon start="56285" stop="57557"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1776</number_coding_nucleotides>
                  <number_encoded_amino_acids>592</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TEIPLTKYQESSILDPTMAASPPFLASAEKKPWWVTNKKIVERYIRDAKILIATQEPNEISSALALVEAALAISPRFELALELKARSLLYLRCFKDVAYMLKDYIPSLKMPSDDTSSTSSSGSFDSSKEQISLISYGDEPNFKCFSISYLKKKVMASLYKNCNKEGQWRYLVLGQACCHLGLMEDAMVLLQTGKRLATDAFRRESICWSEDSFSFSKFPISSKNCCTALQITESETISQLLSHIKLLLRRKTAAIAALDAGLYSEAIRHFSKIVDGRRGAPQGFMAECYMHRASAYHSSGRIAEAIADCNRTLALDPSCIDALRTRAALFETIRCLPDSLHDLEHLKLLYNSMLRDRKLPGPIWKRQNVEYREIPGRLCSLATKIQELKKRVANGETGNVDYYALIGLNWGCSRSELERAHLLLTLRHKPDKSTSFIERCEFADEQDVDSVRDRAKMSALLLYRLIQRGYASLMATIKDEEAAEKQRKKAAAALQLMQQQVQLNQEQQQSRSETFGTVVMQQQVQKIQELQRSVPETLDSDVCNTALCSNTNITNATVFKGAFCREHAIVGNMLSQAGFNQPIPVKYEALSC*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="-" PGL_start="62771" PGL_stop="58266"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="62771" e_stop="62467"/>
            <exon e_start="61675" e_stop="61544"/>
            <exon e_start="58847" e_stop="58266"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.992" e_score="1.000"/>
          <exon-only e_score="0.985"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="62771" e_stop="62467" e_length="305"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.995">
            <gDNA_intron_boundary i_start="62466" i_stop="61676" i_length="791"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="61675" e_stop="61544" e_length="132"/>
          </exon>
          <intron i_serial="2" don_prob="1.000" acc_prob="0.992">
            <gDNA_intron_boundary i_start="61543" i_stop="58848" i_length="2696"/>
          </intron>
          <exon e_serial="3" e_score="0.985">
            <gDNA_exon_boundary e_start="58847" e_stop="58266" e_length="582"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62771" stop="62467"/>
              <exon start="61675" stop="61544"/>
              <exon start="58847" stop="58266"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U320769" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62599" stop="62467"/>
              <exon start="61675" stop="61636"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U337214" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTTCAATTTCATTTTCCCATTTTGCTTCACCTAAACCCTAATCAATTCTTTAATCATTTTGATTTCTAAGTTTAACAATTAATTACCCCACATAAACAACCCCAAGATCTGATTTTTATTTTTTTTTTGAAAAAGAGTGCATTAAAATCCAGATCTTTCTTGAATTTGAAAAAAAAATGTTTTTGTGGGATTGGTTTTATGGAGTTTTGTCATCTCTAGGTTTGTGGCAAAAGGAAGCTAAGATCTTATTCTTAGGTCTTGACAATGCTGGCAAAACCACTCTTCTTCATATGCTCAAAGATGAG : AGGCTAGTTCAGCATCAACCAACGCAGTATCCTACATCTGAAGAGTTGAGTATTGGAAAGATAAAGTTCAAAGCTTTCGACTTGGGAGGTCATCAGATTGCTCGTCGGGTCTGGAAAGACTACTATGCCAAG : GTTGATGCAGTTGTGTACCTAGTTGATGCATATGACAAAGAGCGCTTTGCTGAGTCAAAAAAGGAACTTGACGCGCTTCTTTCTGATGAAGCCCTTGCTACTGTCCCCTTCCTCATTTTGGGAAACAAGATAGACATACCATATGCAGCTTCAGAAGATGAACTGCGTTATCACCTTGGCTTGACCGGTGTCACAACTGGCAAAGGTAAGGTGAATCTTGCTGATTCTACCGTTCGTCCTTTGGAGGTATTTATGTGCAGTATTGTACGGAAAATGGGTTATGGCGATGGATTTAAGTGGGTATCTCAATATATAAAGTAGGTTATGCCATAGAAGTTGAAAGAAGTGGCGTCCTGGTTATGCTGTAGATCAGCATTTTTGGAAAAAGATTGGTTTCACCAGATACTTATTCATTTGTTTTCGAATTGATCAGTCAGTCTTCTATAACTATTTTGTATCCTCTGGTATCTATGTAGTTTGATGAGAATATACTTTTGTTTGTGTAACATTTACATGTAGCTGGAAATTTCTATCTACATATTCTTGACTTATATTTTTCTTTTTTCCATATATTGTTCAAAT</gDNA_template>
            <first_frame> F  Q  F  H  F  P  I  L  L  H  L  N  P  N  Q  F  F  N  H  F  D  F  *  V  *  Q  L  I  T  P  H  K  Q  P  Q  D  L  I  F  I  F  F  L  K  K  S  A  L  K  S  R  S  F  L  N  L  K  K  K  C  F  C  G  I  G  F  M  E  F  C  H  L  *  V  C  G  K  R  K  L  R  S  Y  S  *  V  L  T  M  L  A  K  P  L  F  F  I  C  S  K  M  R :   G  *  F  S  I  N  Q  R  S  I  L  H  L  K  S  *  V  L  E  R  *  S  S  K  L  S  T  W  E  V  I  R  L  L  V  G  S  G  K  T  T  M  P  R :   L  M  Q  L  C  T  *  L  M  H  M  T  K  S  A  L  L  S  Q  K  R  N  L  T  R  F  F  L  M  K  P  L  L  L  S  P  S  S  F  W  E  T  R  *  T  Y  H  M  Q  L  Q  K  M  N  C  V  I  T  L  A  *  P  V  S  Q  L  A  K  V  R  *  I  L  L  I  L  P  F  V  L  W  R  Y  L  C  A  V  L  Y  G  K  W  V  M  A  M  D  L  S  G  Y  L  N  I  *  S  R  L  C  H  R  S  *  K  K  W  R  P  G  Y  A  V  D  Q  H  F  W  K  K  I  G  F  T  R  Y  L  F  I  C  F  R  I  D  Q  S  V  F  Y  N  Y  F  V  S  S  G  I  Y  V  V  *  *  E  Y  T  F  V  C  V  T  F  T  C  S  W  K  F  L  S  T  Y  S  *  L  I  F  F  F  F  P  Y  I  V  Q   </first_frame>
            <second_frame>  F  N  F  I  F  P  F  C  F  T  *  T  L  I  N  S  L  I  I  L  I  S  K  F  N  N  *  L  P  H  I  N  N  P  K  I  *  F  L  F  F  F  *  K  R  V  H  *  N  P  D  L  S  *  I  *  K  K  N  V  F  V  G  L  V  L  W  S  F  V  I  S  R  F  V  A  K  G  S  *  D  L  I  L  R  S  *  Q  C  W  Q  N  H  S  S  S  Y  A  Q  R  *   : E  A  S  S  A  S  T  N  A  V  S  Y  I  *  R  V  E  Y  W  K  D  K  V  Q  S  F  R  L  G  R  S  S  D  C  S  S  G  L  E  R  L  L  C  Q   : G  *  C  S  C  V  P  S  *  C  I  *  Q  R  A  L  C  *  V  K  K  G  T  *  R  A  S  F  *  *  S  P  C  Y  C  P  L  P  H  F  G  K  Q  D  R  H  T  I  C  S  F  R  R  *  T  A  L  S  P  W  L  D  R  C  H  N  W  Q  R  *  G  E  S  C  *  F  Y  R  S  S  F  G  G  I  Y  V  Q  Y  C  T  E  N  G  L  W  R  W  I  *  V  G  I  S  I  Y  K  V  G  Y  A  I  E  V  E  R  S  G  V  L  V  M  L  *  I  S  I  F  G  K  R  L  V  S  P  D  T  Y  S  F  V  F  E  L  I  S  Q  S  S  I  T  I  L  Y  P  L  V  S  M  *  F  D  E  N  I  L  L  F  V  *  H  L  H  V  A  G  N  F  Y  L  H  I  L  D  L  Y  F  S  F  F  H  I  L  F  K  </second_frame>
            <third_frame>   S  I  S  F  S  H  F  A  S  P  K  P  *  S  I  L  *  S  F  *  F  L  S  L  T  I  N  Y  P  T  *  T  T  P  R  S  D  F  Y  F  F  F  E  K  E  C  I  K  I  Q  I  F  L  E  F  E  K  K  M  F  L  W  D  W  F  Y  G  V  L  S  S  L  G  L  W  Q  K  E  A  K  I  L  F  L  G  L  D  N  A  G  K  T  T  L  L  H  M  L  K  D  E  :  R  L  V  Q  H  Q  P  T  Q  Y  P  T  S  E  E  L  S  I  G  K  I  K  F  K  A  F  D  L  G  G  H  Q  I  A  R  R  V  W  K  D  Y  Y  A  K  :  V  D  A  V  V  Y  L  V  D  A  Y  D  K  E  R  F  A  E  S  K  K  E  L  D  A  L  L  S  D  E  A  L  A  T  V  P  F  L  I  L  G  N  K  I  D  I  P  Y  A  A  S  E  D  E  L  R  Y  H  L  G  L  T  G  V  T  T  G  K  G  K  V  N  L  A  D  S  T  V  R  P  L  E  V  F  M  C  S  I  V  R  K  M  G  Y  G  D  G  F  K  W  V  S  Q  Y  I  K  *  V  M  P  *  K  L  K  E  V  A  S  W  L  C  C  R  S  A  F  L  E  K  D  W  F  H  Q  I  L  I  H  L  F  S  N  *  S  V  S  L  L  *  L  F  C  I  L  W  Y  L  C  S  L  M  R  I  Y  F  C  L  C  N  I  Y  M  *  L  E  I  S  I  Y  I  F  L  T  Y  I  F  L  F  S  I  Y  C  S  N </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06SLe0045F21.1" strand="-"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="62676" stop="62467"/>
                    <exon start="61675" stop="61544"/>
                    <exon start="58847" stop="58527"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>660</number_coding_nucleotides>
                  <number_encoded_amino_acids>220</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TTPRSDFYFFFEKECIKIQIFLEFEKKMFLWDWFYGVLSSLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFAESKKELDALLSDEALATVPFLILGNKIDIPYAASEDELRYHLGLTGVTTGKGKVNLADSTVRPLEVFMCSIVRKMGYGDGFKWVSQYIK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="-" PGL_start="72451" PGL_stop="66998"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="72451" e_stop="72446"/>
            <exon e_start="72337" e_stop="72270"/>
            <exon e_start="71954" e_stop="71881"/>
            <exon e_start="71802" e_stop="71736"/>
            <exon e_start="71156" e_stop="71041"/>
            <exon e_start="70073" e_stop="69807"/>
            <exon e_start="69719" e_stop="69603"/>
            <exon e_start="68826" e_stop="68755"/>
            <exon e_start="68660" e_stop="68610"/>
            <exon e_start="68470" e_stop="68240"/>
            <exon e_start="68160" e_stop="67984"/>
            <exon e_start="67754" e_stop="67305"/>
            <exon e_start="67019" e_stop="66998"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.918" acc_prob="0.928" e_score="1.000"/>
          <exon-intron don_prob="0.958" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.990" acc_prob="0.989" e_score="1.000"/>
          <exon-intron don_prob="0.965" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.907" acc_prob="0.987" e_score="1.000"/>
          <exon-intron don_prob="0.612" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.982" acc_prob="0.143" e_score="1.000"/>
          <exon-intron don_prob="0.603" acc_prob="0.968" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.982" e_score="1.000"/>
          <exon-intron don_prob="0.406" acc_prob="0.959" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.748" e_score="1.000"/>
          <exon-only e_score="0.636"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="72451" e_stop="72446" e_length="6"/>
          </exon>
          <intron i_serial="1" don_prob="0.918" acc_prob="0.928">
            <gDNA_intron_boundary i_start="72445" i_stop="72338" i_length="108"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="72337" e_stop="72270" e_length="68"/>
          </exon>
          <intron i_serial="2" don_prob="0.958" acc_prob="0.994">
            <gDNA_intron_boundary i_start="72269" i_stop="71955" i_length="315"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="71954" e_stop="71881" e_length="74"/>
          </exon>
          <intron i_serial="3" don_prob="0.990" acc_prob="0.989">
            <gDNA_intron_boundary i_start="71880" i_stop="71803" i_length="78"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="71802" e_stop="71736" e_length="67"/>
          </exon>
          <intron i_serial="4" don_prob="0.965" acc_prob="1.000">
            <gDNA_intron_boundary i_start="71735" i_stop="71157" i_length="579"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="71156" e_stop="71041" e_length="116"/>
          </exon>
          <intron i_serial="5" don_prob="0.907" acc_prob="0.987">
            <gDNA_intron_boundary i_start="71040" i_stop="70074" i_length="967"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="70073" e_stop="69807" e_length="267"/>
          </exon>
          <intron i_serial="6" don_prob="0.612" acc_prob="0.992">
            <gDNA_intron_boundary i_start="69806" i_stop="69720" i_length="87"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="69719" e_stop="69603" e_length="117"/>
          </exon>
          <intron i_serial="7" don_prob="0.982" acc_prob="0.143">
            <gDNA_intron_boundary i_start="69602" i_stop="68827" i_length="776"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="68826" e_stop="68755" e_length="72"/>
          </exon>
          <intron i_serial="8" don_prob="0.603" acc_prob="0.968">
            <gDNA_intron_boundary i_start="68754" i_stop="68661" i_length="94"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="68660" e_stop="68610" e_length="51"/>
          </exon>
          <intron i_serial="9" don_prob="0.999" acc_prob="0.982">
            <gDNA_intron_boundary i_start="68609" i_stop="68471" i_length="139"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="68470" e_stop="68240" e_length="231"/>
          </exon>
          <intron i_serial="10" don_prob="0.406" acc_prob="0.959">
            <gDNA_intron_boundary i_start="68239" i_stop="68161" i_length="79"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="68160" e_stop="67984" e_length="177"/>
          </exon>
          <intron i_serial="11" don_prob="0.999" acc_prob="0.999">
            <gDNA_intron_boundary i_start="67983" i_stop="67755" i_length="229"/>
          </intron>
          <exon e_serial="12" e_score="1.000">
            <gDNA_exon_boundary e_start="67754" e_stop="67305" e_length="450"/>
          </exon>
          <intron i_serial="12" don_prob="0.000" acc_prob="0.748">
            <gDNA_intron_boundary i_start="67304" i_stop="67020" i_length="285"/>
          </intron>
          <exon e_serial="13" e_score="0.636">
            <gDNA_exon_boundary e_start="67019" e_stop="66998" e_length="22"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="72451" stop="72446"/>
              <exon start="72337" stop="72270"/>
              <exon start="71954" stop="71881"/>
              <exon start="71802" stop="71736"/>
              <exon start="71156" stop="71041"/>
              <exon start="70073" stop="69807"/>
              <exon start="69719" stop="69603"/>
              <exon start="68826" stop="68755"/>
              <exon start="68660" stop="68610"/>
              <exon start="68470" stop="68240"/>
              <exon start="68160" stop="67984"/>
              <exon start="67754" stop="67305"/>
              <exon start="67019" stop="66998"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U320229" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TAAAAT : GCACTTTGAATCCACCCAGCAGCACATCAAGAAACAACTTGCTTCTTCTGATCTTGTTGCCATGTTAA : GGATTATTTGGACTGACGTGCTTCTCATGGATGGAGTGTTGCCTGAGGCTGGTCTGCGTGATATTACCATGGAG : GCTGCTCATGTTGCCGTTAAACAGTACGTTGCTAGCAGATTTAGCCATCTTCTACTTGATATTTCAG : GTGCTGTCGTCAAAGTGGGTAATCAAATGGAGGGTATTGAAGAAAAAAATTCTTTGCAGGCCATCCTTGAGGCCAGTAAAAAGGCAGTAGTGCAAGGCAGTATGGATGTCTTACAG : GATTTCCGTCAACTTCTTGATGAAAACTTGGAACTGCTTTCTAAGTTGAGAGATTTGGTTATTGACTGGGTACAAGAAGGATTTCAGGACTTCTTCAGGAAACTTAATGATCATTTTTTCTTACTTTCTGGAAAGAAAAATCCAGCCGGTCAAGATCTAAGCTTTCATGAGGGAATACAGAGAGACAAAATACTTCCTGGGCTTGTTCTTGTGCTCGTTCAACTCTCTGTTTTTGTTGAGCAAAATGCCATTCCCAGAATTACCGAG : GAAATTGCCTCATCTTTCTCTGGTGGTGGGTCTCGGGGCTATGAAAATGGTCCAGCTTTTGTTCCTGCAGAAATTTGTCGCACCTTCAGAGCAGCTGGTGAAAAATTCTTGCAGCAT : TATATTAACATGAGAACTCAGAAGATATCATTTGTCTTGAATAAAAGGTTTACAACGCCAAATTGGGTCAAG : CATAAAGAGCCCAGAGAAGTTCATATGTTTGTTGATCTGCTTCTTCAAGAG : CTAGATAGTATCATTAAAGAAGTAAAGAATATGTTGCCTGAAGGGATCCAGCGTAAGCATCGCCGTTCTGACAGCAGTGGGAGCACCATTTCCTCCCGTAGTAATCCATTAAGAGATGACAGAATGGTACGGTCAAATACCCAGCAGGCGAGAAGTCAACTCCTTGAGTCCCATTTGGCGAAATTGTTTAAGCAGAAGATGGAAATTTTCACAAAAGTTGAACATACACAG : GACTCAGTAATAACTACTATCGTGAAACTTTGCTTGAAGAGTTTACAAGAATTTGTCCGACTTCAGACTTTTAACCGTAGTGGATTTCAACAAATTCAGCTGGACATCCATTTTCTTAAAACTACTCTGAAGGACACTGCCGATGATGAAGCTGCTGTTGATTTTTTGCTTGATGAG : GTAATTGTTGCTGCTGCTGAGCGATGTCTTGATCCAATTCCTCTGGAACCTTCTATCCTGGACAGGCTTACCCAAGCAAAGCTGGCAAAGGCTCGGGAGCAGAGTCCTACCTCATAACAATTATGGTGGCGTTGTGACCATTGAGCTTGCCATGATCTGAAAACGTTCACGAGATGCTGGCTTACATGCCAAGTACTATATCGGAAATATCAGATCCATGAAAACCTTCTGTAAGGTGTGTATATAACCATTATCCATCTCCGGCTACCATTTCCTAAACGACTTTCAGTTTCCCTCCGAGTACCTTCAGTTTTCCCAAATCCTGAAGAGGTATTGTTTTGCTGGAAACTAAAGGGGAAACGAAAAACTCTTGTATTGAAACTAGACAGTTGAGTGTAATGAATGTTGTTTCCTCCCCCTTTGTGTTAATATATAATGACATCTTCTAAT : AAAAAAGAGATTAACATGAATA</gDNA_template>
            <first_frame> *  N  :  A  L  *  I  H  P  A  A  H  Q  E  T  T  C  F  F  *  S  C  C  H  V  K :   D  Y  L  D  *  R  A  S  H  G  W  S  V  A  *  G  W  S  A  *  Y  Y  H  G   : G  C  S  C  C  R  *  T  V  R  C  *  Q  I  *  P  S  S  T  *  Y  F  R :   C  C  R  Q  S  G  *  S  N  G  G  Y  *  R  K  K  F  F  A  G  H  P  *  G  Q  *  K  G  S  S  A  R  Q  Y  G  C  L  T   : G  F  P  S  T  S  *  *  K  L  G  T  A  F  *  V  E  R  F  G  Y  *  L  G  T  R  R  I  S  G  L  L  Q  E  T  *  *  S  F  F  L  T  F  W  K  E  K  S  S  R  S  R  S  K  L  S  *  G  N  T  E  R  Q  N  T  S  W  A  C  S  C  A  R  S  T  L  C  F  C  *  A  K  C  H  S  Q  N  Y  R   : G  N  C  L  I  F  L  W  W  W  V  S  G  L  *  K  W  S  S  F  C  S  C  R  N  L  S  H  L  Q  S  S  W  *  K  I  L  A  A   : L  Y  *  H  E  N  S  E  D  I  I  C  L  E  *  K  V  Y  N  A  K  L  G  Q   : A  *  R  A  Q  R  S  S  Y  V  C  *  S  A  S  S  R   : A  R  *  Y  H  *  R  S  K  E  Y  V  A  *  R  D  P  A  *  A  S  P  F  *  Q  Q  W  E  H  H  F  L  P  *  *  S  I  K  R  *  Q  N  G  T  V  K  Y  P  A  G  E  K  S  T  P  *  V  P  F  G  E  I  V  *  A  E  D  G  N  F  H  K  S  *  T  Y  T   : G  L  S  N  N  Y  Y  R  E  T  L  L  E  E  F  T  R  I  C  P  T  S  D  F  *  P  *  W  I  S  T  N  S  A  G  H  P  F  S  *  N  Y  S  E  G  H  C  R  *  *  S  C  C  *  F  F  A  *  *   : G  N  C  C  C  C  *  A  M  S  *  S  N  S  S  G  T  F  Y  P  G  Q  A  Y  P  S  K  A  G  K  G  S  G  A  E  S  Y  L  I  T  I  M  V  A  L  *  P  L  S  L  P  *  S  E  N  V  H  E  M  L  A  Y  M  P  S  T  I  S  E  I  S  D  P  *  K  P  S  V  R  C  V  Y  N  H  Y  P  S  P  A  T  I  S  *  T  T  F  S  F  P  P  S  T  F  S  F  P  K  S  *  R  G  I  V  L  L  E  T  K  G  E  T  K  N  S  C  I  E  T  R  Q  L  S  V  M  N  V  V  S  S  P  F  V  L  I  Y  N  D  I  F  *   : *  K  R  D  *  H  E   </first_frame>
            <second_frame>  K  M :   H  F  E  S  T  Q  Q  H  I  K  K  Q  L  A  S  S  D  L  V  A  M  L   : R  I  I  W  T  D  V  L  L  M  D  G  V  L  P  E  A  G  L  R  D  I  T  M  E  :  A  A  H  V  A  V  K  Q  Y  V  A  S  R  F  S  H  L  L  L  D  I  S   : G  A  V  V  K  V  G  N  Q  M  E  G  I  E  E  K  N  S  L  Q  A  I  L  E  A  S  K  K  A  V  V  Q  G  S  M  D  V  L  Q  :  D  F  R  Q  L  L  D  E  N  L  E  L  L  S  K  L  R  D  L  V  I  D  W  V  Q  E  G  F  Q  D  F  F  R  K  L  N  D  H  F  F  L  L  S  G  K  K  N  P  A  G  Q  D  L  S  F  H  E  G  I  Q  R  D  K  I  L  P  G  L  V  L  V  L  V  Q  L  S  V  F  V  E  Q  N  A  I  P  R  I  T  E  :  E  I  A  S  S  F  S  G  G  G  S  R  G  Y  E  N  G  P  A  F  V  P  A  E  I  C  R  T  F  R  A  A  G  E  K  F  L  Q  H  :  Y  I  N  M  R  T  Q  K  I  S  F  V  L  N  K  R  F  T  T  P  N  W  V  K  :  H  K  E  P  R  E  V  H  M  F  V  D  L  L  L  Q  E  :  L  D  S  I  I  K  E  V  K  N  M  L  P  E  G  I  Q  R  K  H  R  R  S  D  S  S  G  S  T  I  S  S  R  S  N  P  L  R  D  D  R  M  V  R  S  N  T  Q  Q  A  R  S  Q  L  L  E  S  H  L  A  K  L  F  K  Q  K  M  E  I  F  T  K  V  E  H  T  Q  :  D  S  V  I  T  T  I  V  K  L  C  L  K  S  L  Q  E  F  V  R  L  Q  T  F  N  R  S  G  F  Q  Q  I  Q  L  D  I  H  F  L  K  T  T  L  K  D  T  A  D  D  E  A  A  V  D  F  L  L  D  E  :  V  I  V  A  A  A  E  R  C  L  D  P  I  P  L  E  P  S  I  L  D  R  L  T  Q  A  K  L  A  K  A  R  E  Q  S  P  T  S  *  Q  L  W  W  R  C  D  H  *  A  C  H  D  L  K  T  F  T  R  C  W  L  T  C  Q  V  L  Y  R  K  Y  Q  I  H  E  N  L  L  *  G  V  Y  I  T  I  I  H  L  R  L  P  F  P  K  R  L  S  V  S  L  R  V  P  S  V  F  P  N  P  E  E  V  L  F  C  W  K  L  K  G  K  R  K  T  L  V  L  K  L  D  S  *  V  *  *  M  L  F  P  P  P  L  C  *  Y  I  M  T  S  S  N  :  K  K  E  I  N  M  N  </second_frame>
            <third_frame>   K   : C  T  L  N  P  P  S  S  T  S  R  N  N  L  L  L  L  I  L  L  P  C  *  :  G  L  F  G  L  T  C  F  S  W  M  E  C  C  L  R  L  V  C  V  I  L  P  W  R :   L  L  M  L  P  L  N  S  T  L  L  A  D  L  A  I  F  Y  L  I  F  Q  :  V  L  S  S  K  W  V  I  K  W  R  V  L  K  K  K  I  L  C  R  P  S  L  R  P  V  K  R  Q  *  C  K  A  V  W  M  S  Y  R :   I  S  V  N  F  L  M  K  T  W  N  C  F  L  S  *  E  I  W  L  L  T  G  Y  K  K  D  F  R  T  S  S  G  N  L  M  I  I  F  S  Y  F  L  E  R  K  I  Q  P  V  K  I  *  A  F  M  R  E  Y  R  E  T  K  Y  F  L  G  L  F  L  C  S  F  N  S  L  F  L  L  S  K  M  P  F  P  E  L  P  R :   K  L  P  H  L  S  L  V  V  G  L  G  A  M  K  M  V  Q  L  L  F  L  Q  K  F  V  A  P  S  E  Q  L  V  K  N  S  C  S  I :   I  L  T  *  E  L  R  R  Y  H  L  S  *  I  K  G  L  Q  R  Q  I  G  S  S :   I  K  S  P  E  K  F  I  C  L  L  I  C  F  F  K  S :   *  I  V  S  L  K  K  *  R  I  C  C  L  K  G  S  S  V  S  I  A  V  L  T  A  V  G  A  P  F  P  P  V  V  I  H  *  E  M  T  E  W  Y  G  Q  I  P  S  R  R  E  V  N  S  L  S  P  I  W  R  N  C  L  S  R  R  W  K  F  S  Q  K  L  N  I  H  R :   T  Q  *  *  L  L  S  *  N  F  A  *  R  V  Y  K  N  L  S  D  F  R  L  L  T  V  V  D  F  N  K  F  S  W  T  S  I  F  L  K  L  L  *  R  T  L  P  M  M  K  L  L  L  I  F  C  L  M  R :   *  L  L  L  L  L  S  D  V  L  I  Q  F  L  W  N  L  L  S  W  T  G  L  P  K  Q  S  W  Q  R  L  G  S  R  V  L  P  H  N  N  Y  G  G  V  V  T  I  E  L  A  M  I  *  K  R  S  R  D  A  G  L  H  A  K  Y  Y  I  G  N  I  R  S  M  K  T  F  C  K  V  C  I  *  P  L  S  I  S  G  Y  H  F  L  N  D  F  Q  F  P  S  E  Y  L  Q  F  S  Q  I  L  K  R  Y  C  F  A  G  N  *  R  G  N  E  K  L  L  Y  *  N  *  T  V  E  C  N  E  C  C  F  L  P  L  C  V  N  I  *  *  H  L  L  I :   K  K  R  L  T  *  I </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06SLe0045F21.1" strand="-"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="72450" stop="72446"/>
                    <exon start="72337" stop="72270"/>
                    <exon start="71954" stop="71881"/>
                    <exon start="71802" stop="71736"/>
                    <exon start="71156" stop="71041"/>
                    <exon start="70073" stop="69807"/>
                    <exon start="69719" stop="69603"/>
                    <exon start="68826" stop="68755"/>
                    <exon start="68660" stop="68610"/>
                    <exon start="68470" stop="68240"/>
                    <exon start="68160" stop="67984"/>
                    <exon start="67754" stop="67638"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1359</number_coding_nucleotides>
                  <number_encoded_amino_acids>453</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KMHFESTQQHIKKQLASSDLVAMLRIIWTDVLLMDGVLPEAGLRDITMEAAHVAVKQYVASRFSHLLLDISGAVVKVGNQMEGIEEKNSLQAILEASKKAVVQGSMDVLQDFRQLLDENLELLSKLRDLVIDWVQEGFQDFFRKLNDHFFLLSGKKNPAGQDLSFHEGIQRDKILPGLVLVLVQLSVFVEQNAIPRITEEIASSFSGGGSRGYENGPAFVPAEICRTFRAAGEKFLQHYINMRTQKISFVLNKRFTTPNWVKHKEPREVHMFVDLLLQELDSIIKEVKNMLPEGIQRKHRRSDSSGSTISSRSNPLRDDRMVRSNTQQARSQLLESHLAKLFKQKMEIFTKVEHTQDSVITTIVKLCLKSLQEFVRLQTFNRSGFQQIQLDIHFLKTTLKDTADDEAAVDFLLDEVIVAAAERCLDPIPLEPSILDRLTQAKLAKAREQSPTS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="-" PGL_start="77187" PGL_stop="72482"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="77187" e_stop="76752"/>
            <exon e_start="76583" e_stop="76476"/>
            <exon e_start="75740" e_stop="75642"/>
            <exon e_start="75541" e_stop="75464"/>
            <exon e_start="74863" e_stop="74786"/>
            <exon e_start="73520" e_stop="73383"/>
            <exon e_start="72546" e_stop="72482"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.915" e_score="1.000"/>
          <exon-intron don_prob="0.901" acc_prob="0.556" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.445" e_score="1.000"/>
          <exon-intron don_prob="0.542" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.933" acc_prob="0.901" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="77187" e_stop="76752" e_length="436"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.915">
            <gDNA_intron_boundary i_start="76751" i_stop="76584" i_length="168"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="76583" e_stop="76476" e_length="108"/>
          </exon>
          <intron i_serial="2" don_prob="0.901" acc_prob="0.556">
            <gDNA_intron_boundary i_start="76475" i_stop="75741" i_length="735"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="75740" e_stop="75642" e_length="99"/>
          </exon>
          <intron i_serial="3" don_prob="0.999" acc_prob="0.445">
            <gDNA_intron_boundary i_start="75641" i_stop="75542" i_length="100"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="75541" e_stop="75464" e_length="78"/>
          </exon>
          <intron i_serial="4" don_prob="0.542" acc_prob="0.999">
            <gDNA_intron_boundary i_start="75463" i_stop="74864" i_length="600"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="74863" e_stop="74786" e_length="78"/>
          </exon>
          <intron i_serial="5" don_prob="0.998" acc_prob="0.994">
            <gDNA_intron_boundary i_start="74785" i_stop="73521" i_length="1265"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="73520" e_stop="73383" e_length="138"/>
          </exon>
          <intron i_serial="6" don_prob="0.933" acc_prob="0.901">
            <gDNA_intron_boundary i_start="73382" i_stop="72547" i_length="836"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="72546" e_stop="72482" e_length="65"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="77187" stop="76752"/>
              <exon start="76583" stop="76476"/>
              <exon start="75740" stop="75642"/>
              <exon start="75541" stop="75464"/>
              <exon start="74863" stop="74786"/>
              <exon start="73520" stop="73383"/>
              <exon start="72546" stop="72482"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U321516" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTCAGAGGCATGTCGAAATGGCTGCTGAGATAAAGAATCTCGATACTGACCTGCAAATGCTGGTATATGAAAATTACAACAAGTTCGTAAGTGCCACAGACACAATTAAAAGGTAAACCATGTTCTAGAAAGTTGTTTCGAACCCATTCCATCCCTTGAGAGACAAACATTAAGGGGTACAGTTGCAACTTAACTCTTTGTAGGTTGAGTTTTTTAGTACTTATAGCATGTTTCACGGGTCCTCAATTTCACTGTTAGAGGTTTCTTAAACTAATTGTGCTTGGCTGCATCTTATATGTTGAATCAGGACTAACTGGGTTTTATCTTGTCATGTTCTCATTTGGCATAATAAAGAGCTCACCTATATGATTACCTTCCCAGGATGAAAAACAATATTGTTGGCATGGAGACAAGTATGGAGCAGCTTCTTGAAAAG : ATAATGTCCGTGCAATCTAAAAGTGATGGGGTCAATACTTTTCTTTTTGAGAAGAGGGAACACATAGAGAAATTGCATAGGACCCGTAATCTTCTACGCAAAATTCAG : TTCATATATGATCTACCCGCTAGGTTAGCAAAGTGTATCAAATCAGAAGCCTATGCTGATGCTGTGAAATACTACACTGGAGCCATGCCCATTTTCAAG : GCATATGGAGACTCTTCGTTCCAGGATTGCAAAAGAGCCTCAGAGGAAGCAATTGCTGTTATTACAACGCACTTGCAG : GGAAAGGTATTTTCAGATTCTGAATCAATACAAGCCAGGGCTGAAGCTGTTATGCTCCTTAAGCAGTTAAATTTTCCG : GTTGATAATTTGAAGGTGCAACTATTTGAAAAGTTAGAACAGTTCCTTGTGGATCTCCATCTGGAATCTAAGGAACTACCCCCTGCTTCAGTAGATCAAGGAAATCTTCCTGAATCAGCTACTTCTGCTGCTCATGAG : GCTTCTATTCGTGAATTTTCCGAGGCTGTCCGTGCTTATCGAGTTATTTTCCATGATTCAGAACA</gDNA_template>
            <first_frame> F  R  G  M  S  K  W  L  L  R  *  R  I  S  I  L  T  C  K  C  W  Y  M  K  I  T  T  S  S  *  V  P  Q  T  Q  L  K  G  K  P  C  S  R  K  L  F  R  T  H  S  I  P  *  E  T  N  I  K  G  Y  S  C  N  L  T  L  C  R  L  S  F  L  V  L  I  A  C  F  T  G  P  Q  F  H  C  *  R  F  L  K  L  I  V  L  G  C  I  L  Y  V  E  S  G  L  T  G  F  Y  L  V  M  F  S  F  G  I  I  K  S  S  P  I  *  L  P  S  Q  D  E  K  Q  Y  C  W  H  G  D  K  Y  G  A  A  S  *  K   : D  N  V  R  A  I  *  K  *  W  G  Q  Y  F  S  F  *  E  E  G  T  H  R  E  I  A  *  D  P  *  S  S  T  Q  N  S   : V  H  I  *  S  T  R  *  V  S  K  V  Y  Q  I  R  S  L  C  *  C  C  E  I  L  H  W  S  H  A  H  F  Q   : G  I  W  R  L  F  V  P  G  L  Q  K  S  L  R  G  S  N  C  C  Y  Y  N  A  L  A   : G  K  G  I  F  R  F  *  I  N  T  S  Q  G  *  S  C  Y  A  P  *  A  V  K  F  S   : G  *  *  F  E  G  A  T  I  *  K  V  R  T  V  P  C  G  S  P  S  G  I  *  G  T  T  P  C  F  S  R  S  R  K  S  S  *  I  S  Y  F  C  C  S  *   : G  F  Y  S  *  I  F  R  G  C  P  C  L  S  S  Y  F  P  *  F  R  T </first_frame>
            <second_frame>  S  E  A  C  R  N  G  C  *  D  K  E  S  R  Y  *  P  A  N  A  G  I  *  K  L  Q  Q  V  R  K  C  H  R  H  N  *  K  V  N  H  V  L  E  S  C  F  E  P  I  P  S  L  E  R  Q  T  L  R  G  T  V  A  T  *  L  F  V  G  *  V  F  *  Y  L  *  H  V  S  R  V  L  N  F  T  V  R  G  F  L  N  *  L  C  L  A  A  S  Y  M  L  N  Q  D  *  L  G  F  I  L  S  C  S  H  L  A  *  *  R  A  H  L  Y  D  Y  L  P  R  M  K  N  N  I  V  G  M  E  T  S  M  E  Q  L  L  E  K  :  I  M  S  V  Q  S  K  S  D  G  V  N  T  F  L  F  E  K  R  E  H  I  E  K  L  H  R  T  R  N  L  L  R  K  I  Q  :  F  I  Y  D  L  P  A  R  L  A  K  C  I  K  S  E  A  Y  A  D  A  V  K  Y  Y  T  G  A  M  P  I  F  K  :  A  Y  G  D  S  S  F  Q  D  C  K  R  A  S  E  E  A  I  A  V  I  T  T  H  L  Q  :  G  K  V  F  S  D  S  E  S  I  Q  A  R  A  E  A  V  M  L  L  K  Q  L  N  F  P  :  V  D  N  L  K  V  Q  L  F  E  K  L  E  Q  F  L  V  D  L  H  L  E  S  K  E  L  P  P  A  S  V  D  Q  G  N  L  P  E  S  A  T  S  A  A  H  E  :  A  S  I  R  E  F  S  E  A  V  R  A  Y  R  V  I  F  H  D  S  E   </second_frame>
            <third_frame>   Q  R  H  V  E  M  A  A  E  I  K  N  L  D  T  D  L  Q  M  L  V  Y  E  N  Y  N  K  F  V  S  A  T  D  T  I  K  R  *  T  M  F  *  K  V  V  S  N  P  F  H  P  L  R  D  K  H  *  G  V  Q  L  Q  L  N  S  L  *  V  E  F  F  S  T  Y  S  M  F  H  G  S  S  I  S  L  L  E  V  S  *  T  N  C  A  W  L  H  L  I  C  *  I  R  T  N  W  V  L  S  C  H  V  L  I  W  H  N  K  E  L  T  Y  M  I  T  F  P  G  *  K  T  I  L  L  A  W  R  Q  V  W  S  S  F  L  K  R :   *  C  P  C  N  L  K  V  M  G  S  I  L  F  F  L  R  R  G  N  T  *  R  N  C  I  G  P  V  I  F  Y  A  K  F  S :   S  Y  M  I  Y  P  L  G  *  Q  S  V  S  N  Q  K  P  M  L  M  L  *  N  T  T  L  E  P  C  P  F  S  R :   H  M  E  T  L  R  S  R  I  A  K  E  P  Q  R  K  Q  L  L  L  L  Q  R  T  C  R :   E  R  Y  F  Q  I  L  N  Q  Y  K  P  G  L  K  L  L  C  S  L  S  S  *  I  F  R :   L  I  I  *  R  C  N  Y  L  K  S  *  N  S  S  L  W  I  S  I  W  N  L  R  N  Y  P  L  L  Q  *  I  K  E  I  F  L  N  Q  L  L  L  L  L  M  R :   L  L  F  V  N  F  P  R  L  S  V  L  I  E  L  F  S  M  I  Q  N  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06SLe0045F21.1" strand="-"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="76835" stop="76752"/>
                    <exon start="76583" stop="76476"/>
                    <exon start="75740" stop="75642"/>
                    <exon start="75541" stop="75464"/>
                    <exon start="74863" stop="74786"/>
                    <exon start="73520" stop="73383"/>
                    <exon start="72546" stop="72484"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>648</number_coding_nucleotides>
                  <number_encoded_amino_acids>216</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RAHLYDYLPRMKNNIVGMETSMEQLLEKIMSVQSKSDGVNTFLFEKREHIEKLHRTRNLLRKIQFIYDLPARLAKCIKSEAYADAVKYYTGAMPIFKAYGDSSFQDCKRASEEAIAVITTHLQGKVFSDSESIQARAEAVMLLKQLNFPVDNLKVQLFEKLEQFLVDLHLESKELPPASVDQGNLPESATSAAHEASIREFSEAVRAYRVIFHDSE</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="-" PGL_start="88662" PGL_stop="88173"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="88662" e_stop="88173"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.941"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.941">
            <gDNA_exon_boundary e_start="88662" e_stop="88173" e_length="490"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88662" stop="88173"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U329937" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CACATGTGGGAGATTTCAATTGGATGAGTTACCATGTCCACATGCTTTTGCCGTTTTAACAATAAAACACATTGGTTATGAGAAATATTGTTCGGCTTACTATACAAGAAAAAATTTATTGTTGACATATCAATTTCAAATGGATCCCCTGCCAAATGAAAGTACATGGAACACAGCAACACATGTTCTTGAAAATGTTGTACTTCCACCTCATGGAAAGAGACCTCCGGGAAGGCCAAAAAATAAAAGACATACTCACTGAGAGAAGATGGATTCAAGAAGGCGAAAATTACATGCAGCAATTGTGGACAATATGATCACAACAAGAAGACTTGCAAAAATGTCAGGCCTTATGATCAAGAATAAAAAAAATAATTTGTTTTATTAGTTTGTTTTAGAAGCTCATTGACTCTACGAATTTGGATCATGTTCGGTTATATGGTTTATATTCTTAGTTCTGCATTCTCGTGTTATTCAGTTTAATAGAATG</gDNA_template>
            <first_frame> H  M  W  E  I  S  I  G  *  V  T  M  S  T  C  F  C  R  F  N  N  K  T  H  W  L  *  E  I  L  F  G  L  L  Y  K  K  K  F  I  V  D  I  S  I  S  N  G  S  P  A  K  *  K  Y  M  E  H  S  N  T  C  S  *  K  C  C  T  S  T  S  W  K  E  T  S  G  K  A  K  K  *  K  T  Y  S  L  R  E  D  G  F  K  K  A  K  I  T  C  S  N  C  G  Q  Y  D  H  N  K  K  T  C  K  N  V  R  P  Y  D  Q  E  *  K  K  *  F  V  L  L  V  C  F  R  S  S  L  T  L  R  I  W  I  M  F  G  Y  M  V  Y  I  L  S  S  A  F  S  C  Y  S  V  *  *  N  </first_frame>
            <second_frame>  T  C  G  R  F  Q  L  D  E  L  P  C  P  H  A  F  A  V  L  T  I  K  H  I  G  Y  E  K  Y  C  S  A  Y  Y  T  R  K  N  L  L  L  T  Y  Q  F  Q  M  D  P  L  P  N  E  S  T  W  N  T  A  T  H  V  L  E  N  V  V  L  P  P  H  G  K  R  P  P  G  R  P  K  N  K  R  H  T  H  *  E  K  M  D  S  R  R  R  K  L  H  A  A  I  V  D  N  M  I  T  T  R  R  L  A  K  M  S  G  L  M  I  K  N  K  K  N  N  L  F  Y  *  F  V  L  E  A  H  *  L  Y  E  F  G  S  C  S  V  I  W  F  I  F  L  V  L  H  S  R  V  I  Q  F  N  R  M </second_frame>
            <third_frame>   H  V  G  D  F  N  W  M  S  Y  H  V  H  M  L  L  P  F  *  Q  *  N  T  L  V  M  R  N  I  V  R  L  T  I  Q  E  K  I  Y  C  *  H  I  N  F  K  W  I  P  C  Q  M  K  V  H  G  T  Q  Q  H  M  F  L  K  M  L  Y  F  H  L  M  E  R  D  L  R  E  G  Q  K  I  K  D  I  L  T  E  R  R  W  I  Q  E  G  E  N  Y  M  Q  Q  L  W  T  I  *  S  Q  Q  E  D  L  Q  K  C  Q  A  L  *  S  R  I  K  K  I  I  C  F  I  S  L  F  *  K  L  I  D  S  T  N  L  D  H  V  R  L  Y  G  L  Y  S  *  F  C  I  L  V  L  F  S  L  I  E   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06SLe0045F21.1" strand="-"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="88661" stop="88401"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>258</number_coding_nucleotides>
                  <number_encoded_amino_acids>86</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TCGRFQLDELPCPHAFAVLTIKHIGYEKYCSAYYTRKNLLLTYQFQMDPLPNESTWNTATHVLENVVLPPHGKRPPGRPKNKRHTH*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="-" PGL_start="91926" PGL_stop="91172"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="91926" e_stop="91172"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.934"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.934">
            <gDNA_exon_boundary e_start="91926" e_stop="91172" e_length="755"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="91926" stop="91172"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U329394" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AATTGCAATTTTTTTCTCTCTCGCGACTGCAATTTTTTCTCTCTCGTGATTGCAATTTTTTTTCGACGACTTCAATTTTCTCTCGCCATTGCAATTTAAAGGTTAGTGTTGAGTAAGATCTGTTAGTTTAGGTTACTTGCACTGCATTCTGCTATTTTTGTTGGTCTCCATTGCACTTAACTGATCCTTTAATGTGAGCTTGCAATTGTGGTATTGACAGTGCCCAGATCGTTACGCCTTTCTTCTTTTTGTGTGGATTTATGTTGAGATTTCGTTTGATTTATGTTTACGTTACTTGTGTGCCTTTTTGTTTGATGATTTATGTTGAGATTTCGTTTGATTCAAGTTCCTGTGAGTGTCTGGTATTCAGTTCTCTTCTCTAATAAGTATGATCTCTTGTTAGCATCTGTGTAATACAACTTTAATTCAGGTTTAATTCACTTGTTAGCATTTGTGTAATACAGCTTTAATTCATGTTTAATTCACTTGTTAGCATTTGTGTAATACAACTTCAATTCAATTTTAGTTCACTTGTTAGCATCCGTGTAATACAACTTTAATTCAGGTTTAATTCACTTGTTAGCATCTATGTAATACAACTTCAATTCAGTTTTAGTTCACTTGTTAGCATTGTGTAATACAATTTTAATTCATGTTTAATTCACTTGTTAGCATTTGTGTAATACAGATTTAATTCATGTTTAATTCACTTGTTAGCATTTGTGTAATACAACTTTAATTCAGTTTTAGTTCAC</gDNA_template>
            <first_frame> N  C  N  F  F  L  S  R  D  C  N  F  F  S  L  V  I  A  I  F  F  R  R  L  Q  F  S  L  A  I  A  I  *  R  L  V  L  S  K  I  C  *  F  R  L  L  A  L  H  S  A  I  F  V  G  L  H  C  T  *  L  I  L  *  C  E  L  A  I  V  V  L  T  V  P  R  S  L  R  L  S  S  F  C  V  D  L  C  *  D  F  V  *  F  M  F  T  L  L  V  C  L  F  V  *  *  F  M  L  R  F  R  L  I  Q  V  P  V  S  V  W  Y  S  V  L  F  S  N  K  Y  D  L  L  L  A  S  V  *  Y  N  F  N  S  G  L  I  H  L  L  A  F  V  *  Y  S  F  N  S  C  L  I  H  L  L  A  F  V  *  Y  N  F  N  S  I  L  V  H  L  L  A  S  V  *  Y  N  F  N  S  G  L  I  H  L  L  A  S  M  *  Y  N  F  N  S  V  L  V  H  L  L  A  L  C  N  T  I  L  I  H  V  *  F  T  C  *  H  L  C  N  T  D  L  I  H  V  *  F  T  C  *  H  L  C  N  T  T  L  I  Q  F  *  F   </first_frame>
            <second_frame>  I  A  I  F  F  S  L  A  T  A  I  F  S  L  S  *  L  Q  F  F  F  D  D  F  N  F  L  S  P  L  Q  F  K  G  *  C  *  V  R  S  V  S  L  G  Y  L  H  C  I  L  L  F  L  L  V  S  I  A  L  N  *  S  F  N  V  S  L  Q  L  W  Y  *  Q  C  P  D  R  Y  A  F  L  L  F  V  W  I  Y  V  E  I  S  F  D  L  C  L  R  Y  L  C  A  F  L  F  D  D  L  C  *  D  F  V  *  F  K  F  L  *  V  S  G  I  Q  F  S  S  L  I  S  M  I  S  C  *  H  L  C  N  T  T  L  I  Q  V  *  F  T  C  *  H  L  C  N  T  A  L  I  H  V  *  F  T  C  *  H  L  C  N  T  T  S  I  Q  F  *  F  T  C  *  H  P  C  N  T  T  L  I  Q  V  *  F  T  C  *  H  L  C  N  T  T  S  I  Q  F  *  F  T  C  *  H  C  V  I  Q  F  *  F  M  F  N  S  L  V  S  I  C  V  I  Q  I  *  F  M  F  N  S  L  V  S  I  C  V  I  Q  L  *  F  S  F  S  S  </second_frame>
            <third_frame>   L  Q  F  F  S  L  S  R  L  Q  F  F  L  S  R  D  C  N  F  F  S  T  T  S  I  F  S  R  H  C  N  L  K  V  S  V  E  *  D  L  L  V  *  V  T  C  T  A  F  C  Y  F  C  W  S  P  L  H  L  T  D  P  L  M  *  A  C  N  C  G  I  D  S  A  Q  I  V  T  P  F  F  F  L  C  G  F  M  L  R  F  R  L  I  Y  V  Y  V  T  C  V  P  F  C  L  M  I  Y  V  E  I  S  F  D  S  S  S  C  E  C  L  V  F  S  S  L  L  *  *  V  *  S  L  V  S  I  C  V  I  Q  L  *  F  R  F  N  S  L  V  S  I  C  V  I  Q  L  *  F  M  F  N  S  L  V  S  I  C  V  I  Q  L  Q  F  N  F  S  S  L  V  S  I  R  V  I  Q  L  *  F  R  F  N  S  L  V  S  I  Y  V  I  Q  L  Q  F  S  F  S  S  L  V  S  I  V  *  Y  N  F  N  S  C  L  I  H  L  L  A  F  V  *  Y  R  F  N  S  C  L  I  H  L  L  A  F  V  *  Y  N  F  N  S  V  L  V  H </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C06SLe0045F21.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="+" PGL_start="94496" PGL_stop="95713"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="94496" e_stop="94768"/>
            <exon e_start="94888" e_stop="94974"/>
            <exon e_start="95628" e_stop="95713"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.705" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="94496" e_stop="94768" e_length="273"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.993">
            <gDNA_intron_boundary i_start="94769" i_stop="94887" i_length="119"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="94888" e_stop="94974" e_length="87"/>
          </exon>
          <intron i_serial="2" don_prob="0.705" acc_prob="0.999">
            <gDNA_intron_boundary i_start="94975" i_stop="95627" i_length="653"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="95628" e_stop="95713" e_length="86"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94496" stop="94768"/>
              <exon start="94888" stop="94974"/>
              <exon start="95628" stop="95713"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U343510" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAAGACCTATCTAAAGCTTATGCTACCATGGCTGCTGGGAATCATGACCTGATCAAATTTGGCGAGCTGGATCTTGATTTTAAGCCTCTCCCAAATGATAAAATCTTGGCCATACACTTAATCCCTCAACTCTTGCCTTTGCTAAAAGACACGATTAAAGAGAGTGCCATTGATAAATCAATTGATGGTCATGAGATATCAGCTGCAAGCGCTAGTGTTCCTGTAGCATATGCCATTATTGCTGCTTATCAGTTTAGATGGCTCATTTCTCAG : GTGGATTATCCTCACCTTGGAAAAGTGTGCTCTTGGGTGATTCCATGTGCCCTAACAGCTCTTGATCACTGGTCGTCTGAAGTAAAG : GGACAGGGCATGATTAGCTTAATATATCTGGCGAAAAATGTCAATGCGGCTGAGATTGGTTGGTATGAAGATGTAATTCTTGATGC</gDNA_template>
            <first_frame> K  D  L  S  K  A  Y  A  T  M  A  A  G  N  H  D  L  I  K  F  G  E  L  D  L  D  F  K  P  L  P  N  D  K  I  L  A  I  H  L  I  P  Q  L  L  P  L  L  K  D  T  I  K  E  S  A  I  D  K  S  I  D  G  H  E  I  S  A  A  S  A  S  V  P  V  A  Y  A  I  I  A  A  Y  Q  F  R  W  L  I  S  Q  :  V  D  Y  P  H  L  G  K  V  C  S  W  V  I  P  C  A  L  T  A  L  D  H  W  S  S  E  V  K  :  G  Q  G  M  I  S  L  I  Y  L  A  K  N  V  N  A  A  E  I  G  W  Y  E  D  V  I  L  D   </first_frame>
            <second_frame>  K  T  Y  L  K  L  M  L  P  W  L  L  G  I  M  T  *  S  N  L  A  S  W  I  L  I  L  S  L  S  Q  M  I  K  S  W  P  Y  T  *  S  L  N  S  C  L  C  *  K  T  R  L  K  R  V  P  L  I  N  Q  L  M  V  M  R  Y  Q  L  Q  A  L  V  F  L  *  H  M  P  L  L  L  L  I  S  L  D  G  S  F  L  R :   W  I  I  L  T  L  E  K  C  A  L  G  *  F  H  V  P  *  Q  L  L  I  T  G  R  L  K  *  R :   D  R  A  *  L  A  *  Y  I  W  R  K  M  S  M  R  L  R  L  V  G  M  K  M  *  F  L  M  </second_frame>
            <third_frame>   R  P  I  *  S  L  C  Y  H  G  C  W  E  S  *  P  D  Q  I  W  R  A  G  S  *  F  *  A  S  P  K  *  *  N  L  G  H  T  L  N  P  S  T  L  A  F  A  K  R  H  D  *  R  E  C  H  *  *  I  N  *  W  S  *  D  I  S  C  K  R  *  C  S  C  S  I  C  H  Y  C  C  L  S  V  *  M  A  H  F  S   : G  G  L  S  S  P  W  K  S  V  L  L  G  D  S  M  C  P  N  S  S  *  S  L  V  V  *  S  K   : G  T  G  H  D  *  L  N  I  S  G  E  K  C  Q  C  G  *  D  W  L  V  *  R  C  N  S  *  C </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06SLe0045F21.1" strand="+"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="94496" stop="94768"/>
                    <exon start="94888" stop="94974"/>
                    <exon start="95628" stop="95711"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>444</number_coding_nucleotides>
                  <number_encoded_amino_acids>148</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KDLSKAYATMAAGNHDLIKFGELDLDFKPLPNDKILAIHLIPQLLPLLKDTIKESAIDKSIDGHEISAASASVPVAYAIIAAYQFRWLISQVDYPHLGKVCSWVIPCALTALDHWSSEVKGQGMISLIYLAKNVNAAEIGWYEDVILD</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="13" PGL_strand="+" PGL_start="97367" PGL_stop="98090"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="97367" e_stop="98090"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.997">
            <gDNA_exon_boundary e_start="97367" e_stop="98090" e_length="724"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="97367" stop="98090"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U332896" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAGAAATCAGAAAACTTGTTCTTCAGACTATAATTTTGATCCAACAGTATATATCATGCTCTGTTACTTCTGTTTTCTCTTCCTTCATGTGATATGGCTTTTTTTGTCTTGTTGTAGTTTCTCTCTAATTATTGAGTTCTTCAATTTCTTAATATTTTCCCCTCATTGTCAAGATCCAAGGGCTCGCAGTTCAAAACCGCTTGGGACAAGCACAAGGATGATCCTGACTTGACAATTATTCATCGTTCCCTTATTAAACAACAGCCTGCAATGGTAAAGTTATCCCTCTGATTTTTCACGAGAAAAATGAGCAAAATGTCGGTCAAACATTCAAGATGATATTTGTTGCACTTACACTAGGTGGTAGCATCAGCTGTCTTGGCCAATTTTTTGCTGCAAAATGATCCTGTGCTTATATAATACTTTGCCAAGGTGGTAGCATCAGCTGTCTTAGCCAATTTTTTGCTGCAAAATGATCCTGTGCTTATATAATACTTTGCCAATGATGCCCTGATCTGTAAAATCAAAATTCAGGTTCTATCTGATGGCTGGTTTTTAGCTGCTCCCTCAATCCCAATATGTGAAAAGTCATTTGGATAGCAATAGTGTTTAAATGTCGTCTTGATCACATATTAATTGAGGAAAGCGTGTAATATTTGTGGCTTCTTGGTGCAATTGTGTGCTAAAAGTTCCTGGAGTTAATGATATAAAAAAGGGATTTTGT</gDNA_template>
            <first_frame> K  K  S  E  N  L  F  F  R  L  *  F  *  S  N  S  I  Y  H  A  L  L  L  L  F  S  L  P  S  C  D  M  A  F  F  V  L  L  *  F  L  S  N  Y  *  V  L  Q  F  L  N  I  F  P  S  L  S  R  S  K  G  S  Q  F  K  T  A  W  D  K  H  K  D  D  P  D  L  T  I  I  H  R  S  L  I  K  Q  Q  P  A  M  V  K  L  S  L  *  F  F  T  R  K  M  S  K  M  S  V  K  H  S  R  *  Y  L  L  H  L  H  *  V  V  A  S  A  V  L  A  N  F  L  L  Q  N  D  P  V  L  I  *  Y  F  A  K  V  V  A  S  A  V  L  A  N  F  L  L  Q  N  D  P  V  L  I  *  Y  F  A  N  D  A  L  I  C  K  I  K  I  Q  V  L  S  D  G  W  F  L  A  A  P  S  I  P  I  C  E  K  S  F  G  *  Q  *  C  L  N  V  V  L  I  T  Y  *  L  R  K  A  C  N  I  C  G  F  L  V  Q  L  C  A  K  S  S  W  S  *  *  Y  K  K  G  I  L  </first_frame>
            <second_frame>  R  N  Q  K  T  C  S  S  D  Y  N  F  D  P  T  V  Y  I  M  L  C  Y  F  C  F  L  F  L  H  V  I  W  L  F  L  S  C  C  S  F  S  L  I  I  E  F  F  N  F  L  I  F  S  P  H  C  Q  D  P  R  A  R  S  S  K  P  L  G  T  S  T  R  M  I  L  T  *  Q  L  F  I  V  P  L  L  N  N  S  L  Q  W  *  S  Y  P  S  D  F  S  R  E  K  *  A  K  C  R  S  N  I  Q  D  D  I  C  C  T  Y  T  R  W  *  H  Q  L  S  W  P  I  F  C  C  K  M  I  L  C  L  Y  N  T  L  P  R  W  *  H  Q  L  S  *  P  I  F  C  C  K  M  I  L  C  L  Y  N  T  L  P  M  M  P  *  S  V  K  S  K  F  R  F  Y  L  M  A  G  F  *  L  L  P  Q  S  Q  Y  V  K  S  H  L  D  S  N  S  V  *  M  S  S  *  S  H  I  N  *  G  K  R  V  I  F  V  A  S  W  C  N  C  V  L  K  V  P  G  V  N  D  I  K  K  G  F  C </second_frame>
            <third_frame>   E  I  R  K  L  V  L  Q  T  I  I  L  I  Q  Q  Y  I  S  C  S  V  T  S  V  F  S  S  F  M  *  Y  G  F  F  C  L  V  V  V  S  L  *  L  L  S  S  S  I  S  *  Y  F  P  L  I  V  K  I  Q  G  L  A  V  Q  N  R  L  G  Q  A  Q  G  *  S  *  L  D  N  Y  S  S  F  P  Y  *  T  T  A  C  N  G  K  V  I  P  L  I  F  H  E  K  N  E  Q  N  V  G  Q  T  F  K  M  I  F  V  A  L  T  L  G  G  S  I  S  C  L  G  Q  F  F  A  A  K  *  S  C  A  Y  I  I  L  C  Q  G  G  S  I  S  C  L  S  Q  F  F  A  A  K  *  S  C  A  Y  I  I  L  C  Q  *  C  P  D  L  *  N  Q  N  S  G  S  I  *  W  L  V  F  S  C  S  L  N  P  N  M  *  K  V  I  W  I  A  I  V  F  K  C  R  L  D  H  I  L  I  E  E  S  V  *  Y  L  W  L  L  G  A  I  V  C  *  K  F  L  E  L  M  I  *  K  R  D  F   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06SLe0045F21.1" strand="+"/>
                <serials PGL_serial="13" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="97368" stop="97598"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>228</number_coding_nucleotides>
                  <number_encoded_amino_acids>76</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RNQKTCSSDYNFDPTVYIMLCYFCFLFLHVIWLFLSCCSFSLIIEFFNFLIFSPHCQDPRARSSKPLGTSTRMILT*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="14" PGL_strand="+" PGL_start="98650" PGL_stop="98995"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="98650" e_stop="98995"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="98650" e_stop="98995" e_length="346"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98650" stop="98995"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U333249" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GTTGTTCAATTAGGGAATCTTGGTGGAACTGATAAAGTTGTCGCCATATGAGGGTGAGAATGCATACAAATAGACCCTTGCAGTCTGGCTCTTTTTTCGGACTCCTCACATAGTGAGAACTTAGTGTATCGAGTTGCCATTCCTATCAATTGCTGTGATTTGTTATGCCGTGCATCAAACGAAGGGATTGAGAGTGATTGGGCTCAGCCTCAATGTAAATAGTTAGTCGCCCATAGGCATACTTTCAAGTTTAAGATATAATACTGTTACAATGCAGAATTTCGTATGGGGATGTACTTATTTTAGGGTCCGTTTGGATGGGCTTAATAAAAGCAGCTTTAAAAAA</gDNA_template>
            <first_frame> V  V  Q  L  G  N  L  G  G  T  D  K  V  V  A  I  *  G  *  E  C  I  Q  I  D  P  C  S  L  A  L  F  S  D  S  S  H  S  E  N  L  V  Y  R  V  A  I  P  I  N  C  C  D  L  L  C  R  A  S  N  E  G  I  E  S  D  W  A  Q  P  Q  C  K  *  L  V  A  H  R  H  T  F  K  F  K  I  *  Y  C  Y  N  A  E  F  R  M  G  M  Y  L  F  *  G  P  F  G  W  A  *  *  K  Q  L  *  K  </first_frame>
            <second_frame>  L  F  N  *  G  I  L  V  E  L  I  K  L  S  P  Y  E  G  E  N  A  Y  K  *  T  L  A  V  W  L  F  F  R  T  P  H  I  V  R  T  *  C  I  E  L  P  F  L  S  I  A  V  I  C  Y  A  V  H  Q  T  K  G  L  R  V  I  G  L  S  L  N  V  N  S  *  S  P  I  G  I  L  S  S  L  R  Y  N  T  V  T  M  Q  N  F  V  W  G  C  T  Y  F  R  V  R  L  D  G  L  N  K  S  S  F  K  K </second_frame>
            <third_frame>   C  S  I  R  E  S  W  W  N  *  *  S  C  R  H  M  R  V  R  M  H  T  N  R  P  L  Q  S  G  S  F  F  G  L  L  T  *  *  E  L  S  V  S  S  C  H  S  Y  Q  L  L  *  F  V  M  P  C  I  K  R  R  D  *  E  *  L  G  S  A  S  M  *  I  V  S  R  P  *  A  Y  F  Q  V  *  D  I  I  L  L  Q  C  R  I  S  Y  G  D  V  L  I  L  G  S  V  W  M  G  L  I  K  A  A  L  K   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C06SLe0045F21.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="15" PGL_strand="+" PGL_start="105716" PGL_stop="106297"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="105716" e_stop="106297"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.995"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.995">
            <gDNA_exon_boundary e_start="105716" e_stop="106297" e_length="582"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="105716" stop="106297"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U330394" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CAAGGGCATGATGAGGATGCCCCGCAAAGCAGCACTTATATGATCGTGGGGTCGAAAGAGACTAGTCATGCTGCTGTTGATGTCAGTGGGCCACTGGATGAACGGCATGATGTCCCATCTCCAGTTAATGAAAGAAGAGATACCCTGAAGTCTAATGTGCTGGCTGAGTTTAATAAAGCTGGAGATGATTCCGTGTCAGGGTCTAAGACATTGAAGAAAAGATCACTTTCCAAGAAGACACTCGGATCTAGACAAAGTCTCGGTAAAGGGGATGGCAGAAATCAGAAAGGTTCTTTACTCATTAACAAGACTGTTCTGACGAATGATTCAGCTGCTTCCAGTAGTGGAGGGAGAGAGGAGACAGAACACCAAAATATCTTAAGCTCTACAAAGGGTGAGGTTCTGCCTGCAGATAATGCTAATTCGAGCAAGGAGATCGAGAGAAATGATTTTTTGAATTCTGAAAAAGAATCTGCCAAAACAAATGAATCCCTAAATGATGATACTGAGGCTCCAGAGGACCAAGAAGATGAAGAATTAAATGTCCTAAGAGAGAAGTCTACTGGTACTGAAGCACAACAT</gDNA_template>
            <first_frame> Q  G  H  D  E  D  A  P  Q  S  S  T  Y  M  I  V  G  S  K  E  T  S  H  A  A  V  D  V  S  G  P  L  D  E  R  H  D  V  P  S  P  V  N  E  R  R  D  T  L  K  S  N  V  L  A  E  F  N  K  A  G  D  D  S  V  S  G  S  K  T  L  K  K  R  S  L  S  K  K  T  L  G  S  R  Q  S  L  G  K  G  D  G  R  N  Q  K  G  S  L  L  I  N  K  T  V  L  T  N  D  S  A  A  S  S  S  G  G  R  E  E  T  E  H  Q  N  I  L  S  S  T  K  G  E  V  L  P  A  D  N  A  N  S  S  K  E  I  E  R  N  D  F  L  N  S  E  K  E  S  A  K  T  N  E  S  L  N  D  D  T  E  A  P  E  D  Q  E  D  E  E  L  N  V  L  R  E  K  S  T  G  T  E  A  Q  H </first_frame>
            <second_frame>  K  G  M  M  R  M  P  R  K  A  A  L  I  *  S  W  G  R  K  R  L  V  M  L  L  L  M  S  V  G  H  W  M  N  G  M  M  S  H  L  Q  L  M  K  E  E  I  P  *  S  L  M  C  W  L  S  L  I  K  L  E  M  I  P  C  Q  G  L  R  H  *  R  K  D  H  F  P  R  R  H  S  D  L  D  K  V  S  V  K  G  M  A  E  I  R  K  V  L  Y  S  L  T  R  L  F  *  R  M  I  Q  L  L  P  V  V  E  G  E  R  R  Q  N  T  K  I  S  *  A  L  Q  R  V  R  F  C  L  Q  I  M  L  I  R  A  R  R  S  R  E  M  I  F  *  I  L  K  K  N  L  P  K  Q  M  N  P  *  M  M  I  L  R  L  Q  R  T  K  K  M  K  N  *  M  S  *  E  R  S  L  L  V  L  K  H  N   </second_frame>
            <third_frame>   R  A  *  *  G  C  P  A  K  Q  H  L  Y  D  R  G  V  E  R  D  *  S  C  C  C  *  C  Q  W  A  T  G  *  T  A  *  C  P  I  S  S  *  *  K  K  R  Y  P  E  V  *  C  A  G  *  V  *  *  S  W  R  *  F  R  V  R  V  *  D  I  E  E  K  I  T  F  Q  E  D  T  R  I  *  T  K  S  R  *  R  G  W  Q  K  S  E  R  F  F  T  H  *  Q  D  C  S  D  E  *  F  S  C  F  Q  *  W  R  E  R  G  D  R  T  P  K  Y  L  K  L  Y  K  G  *  G  S  A  C  R  *  C  *  F  E  Q  G  D  R  E  K  *  F  F  E  F  *  K  R  I  C  Q  N  K  *  I  P  K  *  *  Y  *  G  S  R  G  P  R  R  *  R  I  K  C  P  K  R  E  V  Y  W  Y  *  S  T  T  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06SLe0045F21.1" strand="+"/>
                <serials PGL_serial="15" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="105716" stop="106297"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>582</number_coding_nucleotides>
                  <number_encoded_amino_acids>194</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QGHDEDAPQSSTYMIVGSKETSHAAVDVSGPLDERHDVPSPVNERRDTLKSNVLAEFNKAGDDSVSGSKTLKKRSLSKKTLGSRQSLGKGDGRNQKGSLLINKTVLTNDSAASSSGGREETEHQNILSSTKGEVLPADNANSSKEIERNDFLNSEKESAKTNESLNDDTEAPEDQEDEELNVLREKSTGTEAQH</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="16" PGL_strand="+" PGL_start="107304" PGL_stop="107951"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="107304" e_stop="107951"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="107304" e_stop="107951" e_length="648"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="107304" stop="107951"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U345866" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="16" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TCTTGAATACAGATTATTTAACTGCTTCTGTTGAGGCTGGAAAATTATTAGATGAGGAGCCATATGAATGGCACAAAAAGGGATTTACTGAAGACTTAGCAATCAACTTAGAGGCCCCAAGAAAGTGGCGACTTCTGAGGGAGAGGACTGGACATGGCGCATTATATGGAATGAAGATAATCATTTATGGAGACTGCATTGTACCACCATTGGTATGGTAACTTGTTGTTTGCTGTATATGTTTTTGAAGATTTGAGTTCCTATGCTGCCTATTTGCAAGAATTTCTTTTTCTTCCATCAACTCTTTTTACGGTGTGTTTTGTATGACGAAGAACTATTTTCTGGAACTTCTTTGATGAAATCATATTCTAGTAGTTGGTTTCCTTGTATTATGGAAAAACAATTTCTCCTAACATGGCATATTCCACCGAAGGGGAAAATGACTTGCATTTGGGTGCAGGTAAATTTTCTTTATAAAACGTAATTCTATCATTATTCTTACAAAGCATAAATTTTACTCATATTACTTAAACATGTAGAACGTCTTTCTTTAGTACTAAAAAATTATCACCAGAACACTATTTTAATATTAAACCCAACATCTTGTGCGGCCAGCGGCATCATATGTCATGTACTTTTATCCCCAAT</gDNA_template>
            <first_frame> S  *  I  Q  I  I  *  L  L  L  L  R  L  E  N  Y  *  M  R  S  H  M  N  G  T  K  R  D  L  L  K  T  *  Q  S  T  *  R  P  Q  E  S  G  D  F  *  G  R  G  L  D  M  A  H  Y  M  E  *  R  *  S  F  M  E  T  A  L  Y  H  H  W  Y  G  N  L  L  F  A  V  Y  V  F  E  D  L  S  S  Y  A  A  Y  L  Q  E  F  L  F  L  P  S  T  L  F  T  V  C  F  V  *  R  R  T  I  F  W  N  F  F  D  E  I  I  F  *  *  L  V  S  L  Y  Y  G  K  T  I  S  P  N  M  A  Y  S  T  E  G  E  N  D  L  H  L  G  A  G  K  F  S  L  *  N  V  I  L  S  L  F  L  Q  S  I  N  F  T  H  I  T  *  T  C  R  T  S  F  F  S  T  K  K  L  S  P  E  H  Y  F  N  I  K  P  N  I  L  C  G  Q  R  H  H  M  S  C  T  F  I  P  N </first_frame>
            <second_frame>  L  E  Y  R  L  F  N  C  F  C  *  G  W  K  I  I  R  *  G  A  I  *  M  A  Q  K  G  I  Y  *  R  L  S  N  Q  L  R  G  P  K  K  V  A  T  S  E  G  E  D  W  T  W  R  I  I  W  N  E  D  N  H  L  W  R  L  H  C  T  T  I  G  M  V  T  C  C  L  L  Y  M  F  L  K  I  *  V  P  M  L  P  I  C  K  N  F  F  F  F  H  Q  L  F  L  R  C  V  L  Y  D  E  E  L  F  S  G  T  S  L  M  K  S  Y  S  S  S  W  F  P  C  I  M  E  K  Q  F  L  L  T  W  H  I  P  P  K  G  K  M  T  C  I  W  V  Q  V  N  F  L  Y  K  T  *  F  Y  H  Y  S  Y  K  A  *  I  L  L  I  L  L  K  H  V  E  R  L  S  L  V  L  K  N  Y  H  Q  N  T  I  L  I  L  N  P  T  S  C  A  A  S  G  I  I  C  H  V  L  L  S  P   </second_frame>
            <third_frame>   L  N  T  D  Y  L  T  A  S  V  E  A  G  K  L  L  D  E  E  P  Y  E  W  H  K  K  G  F  T  E  D  L  A  I  N  L  E  A  P  R  K  W  R  L  L  R  E  R  T  G  H  G  A  L  Y  G  M  K  I  I  I  Y  G  D  C  I  V  P  P  L  V  W  *  L  V  V  C  C  I  C  F  *  R  F  E  F  L  C  C  L  F  A  R  I  S  F  S  S  I  N  S  F  Y  G  V  F  C  M  T  K  N  Y  F  L  E  L  L  *  *  N  H  I  L  V  V  G  F  L  V  L  W  K  N  N  F  S  *  H  G  I  F  H  R  R  G  K  *  L  A  F  G  C  R  *  I  F  F  I  K  R  N  S  I  I  I  L  T  K  H  K  F  Y  S  Y  Y  L  N  M  *  N  V  F  L  *  Y  *  K  I  I  T  R  T  L  F  *  Y  *  T  Q  H  L  V  R  P  A  A  S  Y  V  M  Y  F  Y  P  Q  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06SLe0045F21.1" strand="+"/>
                <serials PGL_serial="16" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="107560" stop="107787"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>225</number_coding_nucleotides>
                  <number_encoded_amino_acids>75</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VPMLPICKNFFFFHQLFLRCVLYDEELFSGTSLMKSYSSSWFPCIMEKQFLLTWHIPPKGKMTCIWVQVNFLYKT*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06SLe0045F21.1" strand="+"/>
                <serials PGL_serial="16" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="107306" stop="107524"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>216</number_coding_nucleotides>
                  <number_encoded_amino_acids>72</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LNTDYLTASVEAGKLLDEEPYEWHKKGFTEDLAINLEAPRKWRLLRERTGHGALYGMKIIIYGDCIVPPLVW*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="17" PGL_strand="+" PGL_start="108353" PGL_stop="108937"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="108353" e_stop="108937"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="108353" e_stop="108937" e_length="585"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108353" stop="108937"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U343580" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="17" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGCAATTATGTGCAATACAACACTCATTCCTGGGCGGAAAGATCACTGAAAAAACATGTCAATCGTTTGGAAGAGATTGTTGAGGAGATGGAGCCATCAGATGACAGTAGTAATGATATTGCATGCCAGGTGTGTGGGTCGCCTGACAGGGGTGAAGTAATGCTGATCTGTGGTGACGAAAGTGGCTCTCTTGGATGTGGCATTGGCATGCATGTAGATTGCTGTGATCCTCCCCTTGAATGTATACCCGAGGAAGACTGGTTTTGCCCAGAGTGTAGCAAGAACATGAGTAATACAAGTACCAAAAGGAAGTCCAAAAAAGGGACGTCTACATCAAAGAAGAAGAAGAAGTGATAATGTGTCTGTTGGCTAAGGTCTGTATAATAGCTTCACTCAAGTTAAGTATATTTAGATTAGTGAAGTAAAATGTACAAAAATAATTATTCACATAGCAGCATCTTGCTGCTTTTGTTGAAGAAGTTGATTTTCAAAGTTGTGTAAAATCATCTCTTGAGACATCCAATGCAGGCTGAGCCCTGGATCACATTTGCCTAGTGTAGATGAAACTTTTTATTTCACCCCTTC</gDNA_template>
            <first_frame> S  N  Y  V  Q  Y  N  T  H  S  W  A  E  R  S  L  K  K  H  V  N  R  L  E  E  I  V  E  E  M  E  P  S  D  D  S  S  N  D  I  A  C  Q  V  C  G  S  P  D  R  G  E  V  M  L  I  C  G  D  E  S  G  S  L  G  C  G  I  G  M  H  V  D  C  C  D  P  P  L  E  C  I  P  E  E  D  W  F  C  P  E  C  S  K  N  M  S  N  T  S  T  K  R  K  S  K  K  G  T  S  T  S  K  K  K  K  K  *  *  C  V  C  W  L  R  S  V  *  *  L  H  S  S  *  V  Y  L  D  *  *  S  K  M  Y  K  N  N  Y  S  H  S  S  I  L  L  L  L  L  K  K  L  I  F  K  V  V  *  N  H  L  L  R  H  P  M  Q  A  E  P  W  I  T  F  A  *  C  R  *  N  F  L  F  H  P  F </first_frame>
            <second_frame>  A  I  M  C  N  T  T  L  I  P  G  R  K  D  H  *  K  N  M  S  I  V  W  K  R  L  L  R  R  W  S  H  Q  M  T  V  V  M  I  L  H  A  R  C  V  G  R  L  T  G  V  K  *  C  *  S  V  V  T  K  V  A  L  L  D  V  A  L  A  C  M  *  I  A  V  I  L  P  L  N  V  Y  P  R  K  T  G  F  A  Q  S  V  A  R  T  *  V  I  Q  V  P  K  G  S  P  K  K  G  R  L  H  Q  R  R  R  R  S  D  N  V  S  V  G  *  G  L  Y  N  S  F  T  Q  V  K  Y  I  *  I  S  E  V  K  C  T  K  I  I  I  H  I  A  A  S  C  C  F  C  *  R  S  *  F  S  K  L  C  K  I  I  S  *  D  I  Q  C  R  L  S  P  G  S  H  L  P  S  V  D  E  T  F  Y  F  T  P   </second_frame>
            <third_frame>   Q  L  C  A  I  Q  H  S  F  L  G  G  K  I  T  E  K  T  C  Q  S  F  G  R  D  C  *  G  D  G  A  I  R  *  Q  *  *  *  Y  C  M  P  G  V  W  V  A  *  Q  G  *  S  N  A  D  L  W  *  R  K  W  L  S  W  M  W  H  W  H  A  C  R  L  L  *  S  S  P  *  M  Y  T  R  G  R  L  V  L  P  R  V  *  Q  E  H  E  *  Y  K  Y  Q  K  E  V  Q  K  R  D  V  Y  I  K  E  E  E  E  V  I  M  C  L  L  A  K  V  C  I  I  A  S  L  K  L  S  I  F  R  L  V  K  *  N  V  Q  K  *  L  F  T  *  Q  H  L  A  A  F  V  E  E  V  D  F  Q  S  C  V  K  S  S  L  E  T  S  N  A  G  *  A  L  D  H  I  C  L  V  *  M  K  L  F  I  S  P  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06SLe0045F21.1" strand="+"/>
                <serials PGL_serial="17" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="108353" stop="108706"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>351</number_coding_nucleotides>
                  <number_encoded_amino_acids>117</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SNYVQYNTHSWAERSLKKHVNRLEEIVEEMEPSDDSSNDIACQVCGSPDRGEVMLICGDESGSLGCGIGMHVDCCDPPLECIPEEDWFCPECSKNMSNTSTKRKSKKGTSTSKKKKK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 66 chains have been computed
$ 
$ memory statistics:
$ 63600 bytes spliced alignments in total
$ 18 spliced alignments have been stored
$ 3533 bytes was the average size of a spliced alignment
$ 25240 bytes predicted gene locations in total
$ 17 predicted gene locations have been stored
$ 1484 bytes was the average size of a predicted gene location
$ 0 megabytes was the average size of the backtrace matrix
$ 81 backtrace matrices have been allocated
$ 
$ date finished: 2009-01-16 20:57:37
-->
