<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-01-16 23:32:34"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C06SLe0093P23-Kdhrz/GenomeThreader_SGN_U_tomato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C06SLe0093P23-Kdhrz/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLe0093P23-Kdhrz/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U337451" ref_strand="+" ref_description="SGN-U337451        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: | Symbol: CID3 | ataxin-2-related, similar to SCA2 (GI:1770390) (Homo sapiens); similar to ataxin-2 (GI:3005020) (Mus musculus). Member of a family of PAM2 motif containing proteins. | chr1:20224727-20229613 REVERSE | Aliases: F15I1.27, F15I1_27, CID3(evalue: 4e-44, score=175) genbank/nr: gi|4587560|gb|AAD25791.1| F15I1.27 [Arabidopsis thaliana] (evalue: 3e-42, score=175)">
      <seq>ggtacctgatgatgatgctcctgaatgtcctgatctggacaatatatttgatgaccattggaataggggctgggatcagtttcaagccaatgaaacactgtttggagtaaaaagcacatttgatgaggacctttatacgacaaagcttgagagaggtcctcagatgagtgagttggaaaaagaagctctaagaatagctagagaaattgaaggtgaggatacacgtgatcttcatctagcagaggagagagggatccaacttcatgagaacctagaagtggacgaggaaaccagattttccgcagttgttagagagattgatgatagcggctatgacaactgtgaggacatcctgttggattcacgtaatgatgagacatttcaaggtatatctagtgctatggggaagtcatttactgacatgggcagaaggaaaatgaatgatggtgcacaagtttcattaagatcttccttcatggtataattttgtttacccacattcattagtctttaagaattgtttgttgcggtactgaggctttttccttctgttaagatagggatgacagaggaagatattgtcatattagtcaagtatctcaagctagtcggaaaatatatcaattggttgttgtctgctattgctggtgaatttaagagttatccacgtcttagataccaagcactttcagtgtgaatcatgtggtttaagagcctataaataatactttagcttctgtgtactcgactatagtaaatataagctaattatatgacgcattttagtatttctattcctatcttgcccctaggatgaagtgcaatcttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLe0093P23-Kdhrz/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06SLe0093P23.1" temp_strand="-" temp_description="C06SLe0093P23.1  AC216659.1 htgs_phase:1 submitted_to_sgn_as:C06SLe0093P23 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="6265" stop="3003"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="5965" g_stop="5900" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="66" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="5899" i_stop="4172" i_length="1728">
            <donor d_prob="0.947" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="4171" g_stop="3994" g_length="178"/>
          <reference_exon_boundary r_type="cDNA" r_start="67" r_stop="244" r_length="178" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="3993" i_stop="3888" i_length="106">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="3887" g_stop="3303" g_length="585"/>
          <reference_exon_boundary r_type="cDNA" r_start="245" r_stop="829" r_length="585" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLe0093P23.1" gen_strand="-" ref_id="SGN-U337451" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>829</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLe0093P23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U337451" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="5965" e_stop="5900"/>
          <exon e_start="4171" e_stop="3994"/>
          <exon e_start="3887" e_stop="3303"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGTACCTGATGATGATGCTCCTGAATGTCCTGATCTGGACAATATATTTGATGACCATTGGAATAGGTTGCTAGCTCACATCATTTCCGTTGATTGTTTATGTTTTAGATATCTGTAGTATGTATTGCACGGATCCTTCAAATCCTTGACGTACCAGGTGATTGATCCGCTCTAGATTTGATCAACCTAACTCAGGTGCTTTTGAATAAATTTATGGCCAAGAAGTATAGGTTGATTAGCCATTTGGTTTGGTTTTCGGTTTGTGCCGTATAAATGATATTCACATAGAGTACTAGAACACTTGGTATTAAATGAGATAACTTATGTATAAAAAATAAGTGTTTACAAAGAATTTAATTATACTACGCTCTAATTCAATAACTTCAATTAATTGACGAAACAAAAAAATATATACTTATAAATATCATAATATACATTCCTTGATTGTATCTTAACACCCATGCCCATTGACCTATTGTTACCCACGAGTTGCATGATTAAAATTAATGCTAATACTGTGCTTATATAAATTTATAATTATGTAATTGGTCACTTTCATCTAACTTAATTAGCAGACATGGGTTTAAGTAGTTACTGCCACTTATAGGGCATGGTGAAATTAACAGGAAAAAAATTTCTGAGCTTACATTATGTCATTATCAACTTCTGATATTTTTTTTTGTGTTCTTGTTTGAAAGAGAGCATTACTGTGGTTAAAGAAAAGAAATCTTGTGATACTTCTAGTGGGATTGTTATTTTAGTTGTTCTTGAGCATCACATTCATAAGATCCTATCTTCTCTAGTAATCCATGCAACTGGAAGAATAGGACAAAAAGATCCTTATAGGCAACACAAGCTAGTGATATTAAGGCTTAGTCTTGATGTTATACTTACATTGGGTCCAATGGGTTTAGGGTTCTCTTTGGTTCTCTTAGAGATTTGTGTTAGTAGGAATTGAAAATTCTAGTTTATGGATCCCCAAATTTTTAATGTTTGAATGAAATGGTTCTAAATGGAGTGAAATGGATAGTGAAAATTTGTTGTTGCCTCCTCCCATCTTGGGATTGAGGCGGTATTGTATTTCTTGATCCCGTTCCTCTCATGCATAATTCCTACATATTTGAAACATATTCCTCCTTTCTATCTGTCTCACTGTTGTTTTTCCTATCCGAAGCATATTCCTCCTTTGTCATGGAAGTGTTTTTTGTGAAGTTCTTCCTTTTTTAGGCATCTTTTCTTCTCTAAAGCTAAATAGATATGAATTTAATTTATTATGAAGACAGACATTGAGTTGGATTGTGCCAGATATTAGCACTGGAAAATTCCTCTGGTTTAGTTATTACATTGCTACTGAATCATCATAGAAGTTTTCCACTGTCTTCGAAGTACGATATTTCTTGGTGAAAAGGGTTAATTCCTCCTATTGCTCCTTTTTAGTTTTGATGTGGGTAATCACCAAAAGGAGGAAAAATGTGTCATTCCCTGGTCTGAAGATCACATCTACTTTTTATAGCACATTATTGTATTTTAATTCAGGATGAGTTCCGCTTTCTCGTATGATACAAAATGAATTTTACTCAATTACATTGCCACTGTCCCTTTCTGCTCTATGTCAATGCTAGATGAATGCACAGAATATTTTCATTATTATATCATCCAGTTATTAGTACTACTAGACTCTCTTTGTGCAATGTTATACTTGTGCCAATTTTAATTTTTTGTGTTACTATACTAGTCATCTATCGATATCTTCTTTATTGTTGCTTCAACCTTTATAATGTGCGTATTTGTCAGGGGCTGGGATCAGTTTCAAGCCAATGAAACACTGTTTGGAGTAAAAAGCACATTTGATGAGGACCTTTATACGACAAAGCTTGAGAGAGGTCCTCAGATGAGTGAGTTGGAAAAAGAAGCTCTAAGAATAGCTAGAGAAATTGAAGGTGAGGATACACGTGATCTTCATCTAGCAGAGGTGGGGTAATTGCATTCTTTATACAGAAATCTTTGTTTCTATGTGATTTTTTTCTGCTTCTTTCTCTCTAATATTAGTTGTGCTGCTTGGAATTCATTTTTCATAGGAGAGAGGGATCCAACTTCATGAGAACCTAGAAGTGGACGAGGAAACCAGATTTTCCGCAGTTGTTAGAGAGATTGATGATAGCGGCTATGACAACTGTGAGGACATCCTGTTGGATTCACGTAATGATGAGACATTTCAAGGTATATCTAGTGCTATGGGGAAGTCATTTACTGACATGGGCAGAAGGAAAATGAATGATGGTGCACAAGTTTCATTAAGATCTTCCTTCATGGTATAATTTTGTTTACCCACATTCATTAGTCTTTAAGAATTGTTTGTTGCGGTACTGAGGCTTTTTCCTTCTGTTAAGATAGGGATGACAGAGGAAGATATTGTCATATTAGTCAAGTATCTCAAGCTAGTCGGAAAATATATCAATTGGTTGTTGTCTGCTATTGCTGGTGAATTTAAGAGTTATCCACGTCTTAGATACCAAGCACTTTCAGTGTGAATCATGTGGTTTAAGAGCCTATAAATAATACTTTAGCTTCTGTGTACTCGACTATAGTAAATATAAGCTAATTATATGACGCATTTTAGTATTTCTATTCCTATCTTGCCCCTAGGATGAAGTGCAATCTTC</genome_strand>
        <mrna_strand>GGTACCTGATGATGATGCTCCTGAATGTCCTGATCTGGACAATATATTTGATGACCATTGGAATAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGCTGGGATCAGTTTCAAGCCAATGAAACACTGTTTGGAGTAAAAAGCACATTTGATGAGGACCTTTATACGACAAAGCTTGAGAGAGGTCCTCAGATGAGTGAGTTGGAAAAAGAAGCTCTAAGAATAGCTAGAGAAATTGAAGGTGAGGATACACGTGATCTTCATCTAGCAGAG..........................................................................................................GAGAGAGGGATCCAACTTCATGAGAACCTAGAAGTGGACGAGGAAACCAGATTTTCCGCAGTTGTTAGAGAGATTGATGATAGCGGCTATGACAACTGTGAGGACATCCTGTTGGATTCACGTAATGATGAGACATTTCAAGGTATATCTAGTGCTATGGGGAAGTCATTTACTGACATGGGCAGAAGGAAAATGAATGATGGTGCACAAGTTTCATTAAGATCTTCCTTCATGGTATAATTTTGTTTACCCACATTCATTAGTCTTTAAGAATTGTTTGTTGCGGTACTGAGGCTTTTTCCTTCTGTTAAGATAGGGATGACAGAGGAAGATATTGTCATATTAGTCAAGTATCTCAAGCTAGTCGGAAAATATATCAATTGGTTGTTGTCTGCTATTGCTGGTGAATTTAAGAGTTATCCACGTCTTAGATACCAAGCACTTTCAGTGTGAATCATGTGGTTTAAGAGCCTATAAATAATACTTTAGCTTCTGTGTACTCGACTATAGTAAATATAAGCTAATTATATGACGCATTTTAGTATTTCTATTCCTATCTTGCCCCTAGGATGAAGTGCAATCTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLe0093P23-Kdhrz/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U346045" ref_strand="+" ref_description="SGN-U346045        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: | Symbol: None | expressed protein | chr1:20231364-20232186 FORWARD | Aliases: F15I1.28, F15I1_28(evalue: 5e-29, score=124) genbank/nr: F15I1.28(evalue: 4e-27, score=124)">
      <seq>tgagatccacctctctctcgtgatctcatcttatatctattttccgcctttaatgcctcggttgcggagtagtattctactctttttttcacaaaacccaatttcatatttctctctctctttcttcttcttcgccgcattcgaattcagcttttgtttttgtttcaggttgatctgaagactagtatttgtgttacgttgtttggttttcagatgtaaatctgtctttattgctcaaaaagactgacccccttctgtttattttttccagttttggggttaagtagtgtgtaacagtagtcctctgtttctactctgtttttgttttgatggtctgtaagtgatgagtgcttagtttgtcagtaatagggtatttcttcttagtgggtattttgctaggttgaaaatttgagaatgttgacttgtatagcatgttcgaagcagcttaatactggatctctgcgtgaaccagaggaagatgaaacggctgcaactcccagcaaaaagcaagccattaaagcccttaccgctcagatcaaggata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLe0093P23-Kdhrz/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06SLe0093P23.1" temp_strand="+" temp_description="C06SLe0093P23.1  AC216659.1 htgs_phase:1 submitted_to_sgn_as:C06SLe0093P23 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="20563" stop="21693"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20854" g_stop="21391" g_length="538"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="534" r_length="534" r_score="0.903"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="21392" i_stop="21485" i_length="94">
            <donor d_prob="0.996" d_score="0.96"/>
            <acceptor a_prob="0.999" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="21486" g_stop="21495" g_length="10"/>
          <reference_exon_boundary r_type="cDNA" r_start="535" r_stop="544" r_length="10" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLe0093P23.1" gen_strand="+" ref_id="SGN-U346045" ref_strand="+">
        <total_alignment_score>0.903</total_alignment_score>
        <cumulative_length_of_scored_exons>548</cumulative_length_of_scored_exons>
        <coverage percentage="1.007" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLe0093P23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U346045" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20854" e_stop="21391"/>
          <exon e_start="21486" e_stop="21495"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAGATCCACCACCTCTCTCTCGTGATCTCATCTTAATATCTATTTTCCGCCTTTAACGCCTCGGTTACGGAGTAGTATTCTACTCTTTTTTTTTTTCACAAAACCCAATTTCATATTTCTCTCTCTCTCTATCTTTCTTCTTCTTCGCCGTACTCGAATTCAGCTTTTGTTTTTTGTTCCAGGTTGATCTGAAGACTAGTATTTGTGTTTCGTTGTTTGGTTTTCAGATGTAAATCTGTCTTTATTGCTCAAAAAGACTGACCCCCTTCTGTTTAGTTTTTCCAGTTTTGGGGTTAAGTAGTGTGTAACATTAGTCCTCTGTTTCTACTC-----------TGATGGTCAGTAAGTGATGAGTGCTTAGTTTGTCATTAATAGGGTATTTCTTCTTAGTGGGTATTTTGCTAGGTTGAAAATTTGAGGATGTTAACTTGTATAGCATGTTCGAAGCAGCTTAATACTGGATCTCTACGTGAACCAGAGGAAGATGAAACGGCTGCAACACCCAGCAAAAAGCAAGCCATTAAAGCCCTTACTGCTCAGGTGGTTTTTTTTTTCTCAATGAACTTGAAAAAGCTGTTGTTAAGTGCAAAAGCATGTATATTTAGCTGTGGTTTTGATGTTTTGTTTTTTTCAGATCAAGGATA</genome_strand>
        <mrna_strand>TGAGAT---CCACCTCTCTCTCGTGATCTCATCTT-ATATCTATTTTCCGCCTTTAATGCCTCGGTTGCGGAGTAGTATTCTACTCTTTTTT-T---CACAAAACCCAATTTCATA--T-T-TCTCTCTC--TCTTTCTTCTTCTTCGCCGCATTCGAATTCAGCTTTTG-TTTTTGTTTCAGGTTGATCTGAAGACTAGTATTTGTGTTACGTTGTTTGGTTTTCAGATGTAAATCTGTCTTTATTGCTCAAAAAGACTGACCCCCTTCTGTTTATTTTTTCCAGTTTTGGGGTTAAGTAGTGTGTAACAGTAGTCCTCTGTTTCTACTCTGTTTTTGTTTTGATGGTCTGTAAGTGATGAGTGCTTAGTTTGTCAGTAATAGGGTATTTCTTCTTAGTGGGTATTTTGCTAGGTTGAAAATTTGAGAATGTTGACTTGTATAGCATGTTCGAAGCAGCTTAATACTGGATCTCTGCGTGAACCAGAGGAAGATGAAACGGCTGCAACTCCCAGCAAAAAGCAAGCCATTAAAGCCCTTACCGCTCAG..............................................................................................ATCAAGGATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLe0093P23-Kdhrz/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U344890" ref_strand="+" ref_description="SGN-U344890        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: | Symbol: None | expressed protein | chr5:6947845-6952040 FORWARD | Aliases: F7C8.130, F7C8_130(evalue: 1e-55, score=213) genbank/nr: gi|42567992|ref|NP_197554.2| expressed protein [Arabidopsis thaliana] >gi|26449368|dbj|BAC41811.1| unknown protein [Arabidopsis thaliana] (evalue: 9e-54, score=213)">
      <seq>tcaggtggagcctggtgttctaatcacgtttgtttctctacctgaaggtggaaacgatctgaaacgaattcgattcagccgtgagctatttaacaagtggcaagctcaacgttggtgggctgagaattatgacaaggtcatggaattatacaatgtccacaggttcaatcgacgaacagtaccgttgccaatccctccgaggtctgaagatgagaacttgaagcttgattatgctgagagtagtccagtaacacctccactaacgaaagagcgtcttcctagccactttcatcgttcaacaggagtggaacacttgtcatcaggctctgttgaaagagatccatcacagggtcatcattattatgatgcaggtggtctcacttcgacccctaagctctccaacatcagtgcgacaaaaagtgaggcaccgtcaatggatgcttctgcacggtctagctcttcaagggaggctgatcgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLe0093P23-Kdhrz/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06SLe0093P23.1" temp_strand="+" temp_description="C06SLe0093P23.1  AC216659.1 htgs_phase:1 submitted_to_sgn_as:C06SLe0093P23 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="21491" stop="26814"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="21791" g_stop="21868" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="78" r_length="78" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="21869" i_stop="25969" i_length="4101">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="25970" g_stop="26105" g_length="136"/>
          <reference_exon_boundary r_type="cDNA" r_start="79" r_stop="214" r_length="136" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="26106" i_stop="26250" i_length="145">
            <donor d_prob="0.709" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="26251" g_stop="26514" g_length="264"/>
          <reference_exon_boundary r_type="cDNA" r_start="215" r_stop="478" r_length="264" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLe0093P23.1" gen_strand="+" ref_id="SGN-U344890" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>478</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLe0093P23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U344890" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="21791" e_stop="21868"/>
          <exon e_start="25970" e_stop="26105"/>
          <exon e_start="26251" e_stop="26514"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAGGTGGAGCCTGGTGTTCTAATCACGTTTGTTTCTCTACCTGAAGGTGGAAACGATCTGAAACGAATTCGATTCAGGTATTCTTTTTCTCTGCTTTGATCTGTTCTTTGAAAGTTGTTGTTTGTTTGCGAGTAATTAGTATTACTGTTTCAATTTTTCCTGCTTTTTTTTTCTGTGTGGCGCCGAATGACCTTTTGATGGGTCGTTTTCTGGAATATGATTTATAATTGTACAGTAGACTTGTAGTTGGATATATCTGCACTGTGCCAGAAATTATGGAGTGGACCAAAAGTGGGTCTTTTATCCAGGCTTAAAATAGTGGCTTGCTGCCTTAACAAATTGAATCTATCCATAGTACAAAAGAAGTATAATACAATATTCAAGCATGAGTATTTTTGCACACGTCAAATGGAAGATTTCATTAAGATTATATGTTAGTATTAGATTTGAGAGCAAGTAATTGGTGAACAACCAGGTGGAGCGGATAGTCACTCCGGTTTAACCGGTTATATGTACAAGTCTTTAATAATTTGTTATGTAAGATGGGACACCTAATTACCTGGCAGTAGAACAATAAATCTTTCTAAACAAGATATATATCATATTGACAAGACTGAAACTATCCAATTATGTTACGTTTAGATACGTCAATTAATAACATCATATATCACTCCCTCTGACCCTATTAACATGAAAGCTGAATCTCAAATGATTTGGCTTGATATATACTTAACTTGGTAAGAATATGTAGAAATGATCATTGGAAATGGTGAAAATTGTATTAAAAATATGATTGGTATGGAGATGTTGTTTAAGCTTTAAAGATTGGAATCTTTGAATAAATAAAATAAAATTATTCGATGAATAATGTTGTAATTCAGTAGTGGATGTAAAGAAATTAGAACTTAATGAGCAAAAATATGTCTTGTGTTTACAATATTTTTGTTTGGAAAATTATTGGAAGATTAATTTGTCAAATAAATTATTTAGATGATCTTTTGGAATGTAAATTGAATGTTCTTTATTTTGTTACGTTGGTTTAGGGTTTACTATATTATAACATGAAAAAAATTAACAAGGAAAAATGAAAGATAAACAATATAGACTCTGGGTGATGAGTGTAATTAGTAATTTTTTGACATATAAAGAAAATAAATCTTTTGCATTTCTTACTTCTACCCATCAACAAAAAGAATACTCAATGTGGACTTTTTGTGTCTTCTTTGTAGAACCAATGTCAACGTGACGAATCAATACATTGAATCTTCCAATAAACCTTTGGACTTCTTAGGCTTTAAATACACTCAACCCTCTTTCCTTCTAATATCACTCGTCCGTTATCTTACCAAGCAAAAAGATCTTTAGTGTAGTAACATGACAATCTCTTCTTCCACAATTGGAACTCCATGTGATGTGCGAAGAAGATGGTACCATATGGATTGGGAGATCGAACTGTTGAAAGACGAAGTAAGGACCTTAATTATTTTGTGGAAGAACTCTGGGAGTTGAGGCATTGTTTCCATACGTACATTGAAGAGGTTAAGAATGCGAACAAGGAAGAGGGTGGTAGCCATGGATGTGCTACTCTATCAATGTATGTGTGTATGTTTTTGTTTTTGGTGTTGTTTCAACTTTATGAAAACTCTAGATCTCACAGATATCGAGCAATTAGCAAAACATACATTAAGAAATTTTTAGATCAAATTGTTTTGTAGTCATATTTTTTTAATATATATCAAAGTAAATTTTTTTATAGGATAAATTTAGGGCAAAATTAAGGCCCATATTATAATTCAACTACTTTTTTTGTCAAGAAGTGAGAATGGGCCTACTCCAAAAAAAAATCAGGCTCAATACATGATGCAATCTGATACAACAAAATTTTAAACTAAACATAACAAAATAAAGAACATTCAATTTACATTTTAAAAATCCATCGAATAAATTTTCAAAAACTTCAGCCAAAAAACTGCTAATTACTAAATATTTTCATGGATAATTTCACTCTATCTATTCGAAGGTTCCAATCTGCATTATCATACTTGTCATATTTTCGGTACATGCTTCTACTAACTCCAATGGTCATTCTGGCCAAGTTGAGTATATACTTGTCTTTTCTTCTTAAGAACAGCATAAACATTGTCCATTAAATTTATGAACGAAAGAGAGCGAAAATAGCCGAATTTTGATGATGTAAAAGAAACAACAATGGAAGACAAAGATTGGAAGAAATAGAGTGGATAAATAATGGAAGAAAATCATTTGGTATTTGACAGGGTTGTTATTGGCTAATGTTTTGGATAGTCAGGTAGCGGTTTGAAATTTAGAGGGCATTTTGAGTGCAAAAAAATGTGAATTTACCGATTCACCCTTGTCAGCCCCTCTAATTACGAAAATAACTCCAAAAAGCACTAGTTGTGACAAATATAATATTCACTAGAAATTAACATCTCTTTCCGGTCTTTATAGATATAACTTGCTTCAGTTATAGGTAAATCAAGCCTAATCATTCATGTTTACTTGTCCTCGAGCTTTGAGGTTCGGCTTTCATGTTAACTGGGAAGTGTTAGAGAGAGTGACGATTTTGGTATATGATGTTAATGATTGGCCTATTTAAGCGTAACATAGATGGATAGCTCCACTCTTGCCAATATCATCTACATCTAGTTTAGGAGGGTCTTTTGTTTTATCGACAGGCAGTTGTGTATCCCCTCTTACATATCAAACTATTGAAGACTTGTGCAAATAACCGGGTAATAATGGAGGGTAGAACGGACTGGTTGTCTGTAGAACATGTCTACATGGCTGCTGAGCAATTACTTGCTTTCAAATCTAATACTAACTGACGGTCTTTAATGTAATCTTCTATCCGACGTAGGTAGAAAACACCCATGGACATTTTTTCTGCTGACTCATTTTTATTATGCATATGTGTTCACTGTTTAATGCTACTGTGAAGTAAAATTGAACTAGTGGTTCTTGTGATAACATGTGACCTTTTTTTTTAATCCTCTTAAGTATGCTAAGTTATCACAGCCCTTAGAGAATTTCAGCTAAGACCTGTGCCTAATTAATTATGAGCATGAGTTTTCTTATTGTTGGTCATTTAGTCCATTAGTAAGTGAACTTTTGAATTTCTTGAGGAAAATAGATACTTCTTCCGTGTCAATTTGTTTTACCTACTTCTCCTTTTTAGTCAATTTCAAAAGAACTCTTTCCCTTTTTAGTAACTCTTTAGTTTCATCATCTTCCCATAAGAACATTTTAGTACTTTTGAGTTTTGACATATCTTTAATTTAAGACCACAAGTTTCAAAAATCTTTTTTATTTTCTGAAACTCTGTGCCAAGTCAAAGTAGGCCAAACAAATTGAAATAAACAGAGTAACATATAAGTAATTGATTCATTTCTGTTTGGAAATATATGGATTCATATCTTTATCACGTCATAACATTAGCAGAAACATTTTTGTTTTTAATTTTCATTTTGGCGACCAATTTTGTTACTACCTTAAACTATAACGCGAAAAGTAAAGCGTCTTTTTTTCCTTTCTAGTTTGCAGTTCAATTCTTGAGTATGTCAGTGTGGGCTTTCACCTTCCCTTCATAGCATGCTTCTATTTCTGCCTGAAATTATACAAAGTTGACTAATTAGATTCTGTTTATTGCATGAGCTGCAGCTGAAAATTGTGTCTTAACAAAATTGATTGTGATGTATTAAAAGCATTGTGATCTTGCTCCTCCTGTCCCAGCACTATTTTCCTAACTCTGCCATTGCTTCAATGTTAGAGTCAATACTACTCTGAAATGCTGTAATCACTAATTGCCCGTCAAGTCCTGAGTTTTGGAATCTTGAATTGGAAGATAAGCTCAGCATGATATTCTTTGGTTCAAAATGAAACTTGATTGAAGTTGCAGACCTCATTGGCTGTCTTTGTTGAGCTGTCAACTCCCTTATATCACTACTACTGACGACTGTTATTAACTGAAGGAGGATGGCAGTGATGTAATGCTTTGCCTTTTTTTATCTGAACTGCAATAGTTGCAGCTTTCTCATGAGCATATTTTTGTATGCATGGGTGACTGATCTTTATGATTGAATGCATCTTCCACCTTCCCCACAGGCCATAATTGGTAAACTGGTGAAGAGTTCTAAAATGTTACTGATATTTTTTTTCAGCCGTGAGCTATTTAACAAGTGGCAAGCTCAACGTTGGTGGGCTGAGAATTATGACAAGGTCATGGAATTATACAATGTCCACAGGTTCAATCGACGAACAGTACCGTTGCCAATCCCTCCGAGGTCTGAAGATGAGGTGAGCCTTGTGGTTTAGTGGCAAATGTTGCAACCAATCCTATTAAATTGTTTGGAGCAGCACTCTTGCCTTCTTGCTCTTTTGTATTGCAAGTATATGTATTCATGTATGTTTCTTGTTCATTATATGTACCATTTTGTTTCAGAACTTGAAGCTTGATTATGCTGAGAGTAGTCCAGTAACACCTCCACTAACGAAAGAGCGTCTTCCTAGCCACTTTCATCGTTCAACAGGAGTGGAACACTTGTCATCAGGCTCTGTTGAAAGAGATCCATCACAGGGTCATCATTATTATGATGCAGGTGGTCTCACTTCGACCCCTAAGCTCTCCAACATCAGTGCGACAAAAAGTGAGGCACCGTCAATGGATGCTTCTGCACGGTCTAGCTCTTCAAGGGAGGCTGATCGC</genome_strand>
        <mrna_strand>TCAGGTGGAGCCTGGTGTTCTAATCACGTTTGTTTCTCTACCTGAAGGTGGAAACGATCTGAAACGAATTCGATTCAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGAGCTATTTAACAAGTGGCAAGCTCAACGTTGGTGGGCTGAGAATTATGACAAGGTCATGGAATTATACAATGTCCACAGGTTCAATCGACGAACAGTACCGTTGCCAATCCCTCCGAGGTCTGAAGATGAG.................................................................................................................................................AACTTGAAGCTTGATTATGCTGAGAGTAGTCCAGTAACACCTCCACTAACGAAAGAGCGTCTTCCTAGCCACTTTCATCGTTCAACAGGAGTGGAACACTTGTCATCAGGCTCTGTTGAAAGAGATCCATCACAGGGTCATCATTATTATGATGCAGGTGGTCTCACTTCGACCCCTAAGCTCTCCAACATCAGTGCGACAAAAAGTGAGGCACCGTCAATGGATGCTTCTGCACGGTCTAGCTCTTCAAGGGAGGCTGATCGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLe0093P23-Kdhrz/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U322786" ref_strand="+" ref_description="SGN-U322786        Tomato 200607 #1 [7 ESTs aligned] arabidopsis/peptide: | Symbol: None | transcription initiation factor IID (TFIID) subunit A family protein, similar to SP:Q16514 Transcription initiation factor TFIID 20/15 kDa subunits (TAFII-20/TAFII-15) {Homo sapiens}; contains Pfam profile PF03847: Transcription initiation factor TFIID subunit A | chr1:5984154-5987764 REVERSE | Aliases: None(evalue: 1e-41, score=168) genbank/nr: TATA(evalue: 8e-59, score=231)">
      <seq>aaaatccattttccatctccgacaacacacccagaacacaattatattgagcatatggatatttagctatttttgaaaaaatgctgaattttcttatcaaagctttttcaacgaacacaacaacaaatactcttccaattttttttttaaccatatcctgtcggcaattgattgagaaatcagcaacctgttgatttgaatcagaattttctccggtcaagcttgttgcaggcactgcccagttcaacttgcagtttcagcttctggatttcggaattcaacttgatcagcataattggacaaactgtcaagctgcctctgttgtctggatagtcttgttgcaggcactgcctagtttaatttgcaattccaacttttggattcgcggagatgtggaggggttggatgtagtagtcacgagggagaggtggagctagagtaggctgaaaaagtattaaggaaaagtgattagacacaacatgatgcagcttctgaccttagataagagggagagggaatggagactgcggaccgcctaaaagggcacgccatgatggcaggattgatgcagtcttctctgtgtcatttccgtggacagtcttttcagggatgcaggcaatgggaaactgggaatattgggatctctcaatttgagctctcaactcagggcacatcgggtccttgcatatgcccaacaaaggatgaacaaaggtcaactacggaagacgttgtctcagcaaacttccctcatcatcagtcagaagagttatcgcaaactgcacagccggcacaacagcaattggggtatccgcagatgcatcagaatcagcagctccaacagcaacaacaacaacctcagcaggttttgcatcagcagcaatcttctccagcaatgaattcccctggtggtcataatttactgagtttgactggatcagaaccagatgccactggatctgggacaacgactcctgggagtagttcaagccagggggctgaagcaagcaatcagtttcttgggaagagaaagattcaggatttagtttcacaggtggatcctcagggaagagttgatcctgaagttgaacagtttcttttagagatcgctgatgactttattgattcggttactacattttcttgcaatttggcgaagcatcggaaatcttcgactctggagtccaaagatatactgttacatttagagaaagattggaatttgactgtcccaggtttttcaagtgaggataagaaacactgccctgaacattcatcaggtgatctctgcaaagagcgtttggaaatgtctttgtgcttgactcagatacctgatatgatggaggcttcaccacaagctgaagcaagtacaagcagcagcgcgaaggagatcgtaagtccagggctgggtgaccaggttggttcgactgacataatcggaccaccaagttcagaggaattggcttcaccatctaatggtgaaatatagttcaactataacaagatgtgatgttccgtggagattggtataccccttgctttactgtaataaaacctttttcaactttagtttgcttgtcgactgaagaacgtgaacataagtctgttatgaatattcatgaccttttgttggtatgttatgttaagttttctttattaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLe0093P23-Kdhrz/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06SLe0093P23.1" temp_strand="+" temp_description="C06SLe0093P23.1  AC216659.1 htgs_phase:1 submitted_to_sgn_as:C06SLe0093P23 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="27887" stop="38222"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28187" g_stop="28465" g_length="279"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="273" r_length="273" r_score="0.950"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="28466" i_stop="29756" i_length="1291">
            <donor d_prob="0.962" d_score="1.00"/>
            <acceptor a_prob="0.936" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29757" g_stop="29868" g_length="112"/>
          <reference_exon_boundary r_type="cDNA" r_start="274" r_stop="385" r_length="112" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="29869" i_stop="29966" i_length="98">
            <donor d_prob="0.907" d_score="1.00"/>
            <acceptor a_prob="0.988" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="29967" g_stop="30124" g_length="158"/>
          <reference_exon_boundary r_type="cDNA" r_start="386" r_stop="543" r_length="158" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="30125" i_stop="31083" i_length="959">
            <donor d_prob="0.307" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="31084" g_stop="31301" g_length="218"/>
          <reference_exon_boundary r_type="cDNA" r_start="544" r_stop="761" r_length="218" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="31302" i_stop="34929" i_length="3628">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.181" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="34930" g_stop="35219" g_length="290"/>
          <reference_exon_boundary r_type="cDNA" r_start="762" r_stop="1051" r_length="290" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="35220" i_stop="35491" i_length="272">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="35492" g_stop="35566" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="1052" r_stop="1126" r_length="75" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="35567" i_stop="36016" i_length="450">
            <donor d_prob="0.964" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="36017" g_stop="36095" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="1127" r_stop="1205" r_length="79" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="36096" i_stop="37063" i_length="968">
            <donor d_prob="0.802" d_score="1.00"/>
            <acceptor a_prob="0.952" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="37064" g_stop="37128" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="1206" r_stop="1270" r_length="65" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="37129" i_stop="37474" i_length="346">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.977" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="37475" g_stop="37510" g_length="36"/>
          <reference_exon_boundary r_type="cDNA" r_start="1271" r_stop="1306" r_length="36" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="37511" i_stop="37572" i_length="62">
            <donor d_prob="0.909" d_score="0.00"/>
            <acceptor a_prob="0.861" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="37573" g_stop="37925" g_length="353"/>
          <reference_exon_boundary r_type="cDNA" r_start="1307" r_stop="1659" r_length="353" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLe0093P23.1" gen_strand="+" ref_id="SGN-U322786" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>1665</cumulative_length_of_scored_exons>
        <coverage percentage="1.004" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLe0093P23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U322786" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28187" e_stop="28465"/>
          <exon e_start="29757" e_stop="29868"/>
          <exon e_start="29967" e_stop="30124"/>
          <exon e_start="31084" e_stop="31301"/>
          <exon e_start="34930" e_stop="35219"/>
          <exon e_start="35492" e_stop="35566"/>
          <exon e_start="36017" e_stop="36095"/>
          <exon e_start="37064" e_stop="37128"/>
          <exon e_start="37475" e_stop="37510"/>
          <exon e_start="37573" e_stop="37925"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAATCCATTTTCCATCTCCCACAACACACCCAGAACACAGTTATATTGAGCATATGGATATTTAGCTATTTTTTTTGAAAAATGCTGAATTTTCTTATCCAAGCGTTTTCAATGAAACACAGCAACAAATACTCTTCCAATTTTATTTTTTTTAACCATATCCTGTCGGCAATTGATTGAGAAATCAGCAACCTGTTGATTTGAATCAGAATTTTCTCCGGTCAAGCTTGTTGCAGGCACTGCCCAGTTCAACTTGCAGTTTCAGCTTCTGGATTTCGGTAATGTCTTCTTACTTTCACTTCAGCACTTGTATGATTCCTCAGAAGGTGTAGAGTAACAAATTAAAATTTGAATTTCTAAAAACTCTTCGCATATTTTAATTAGCGGAGATGTTGGATGTAGTAGTCACAAGATAGAGGTAGGCCGAAAAAGTATTAGAGTAAGTGATTAGACAAGAGATATTGCAGGTTTTGACCTTAGATAAGAGGGAGAGGGAATGGAGACCGCTTATTAGGTAGAAGACAATTAGCTAGTGAAGTGTTGTGCTTTCGAGGGTTCAAGCTTATGGGTATTCTTGTAATTGTAGTTTCTGATTTGTGTATTCATTTGTTTGTTGTGTTTTGGCTACTGCACTATTTTGTTGTTGTTCATGTTCTTTTCTTGTAGGCTTTGCATTGTTTTTCTTATTAGTTGTTATGTTTTTTGTCACTGTTTTCTTCTTCTTTATACTTGAAATTGCTGCAAGTGAACCGAGAGTCAATCGGAAATAACCTTTCTACCTCCACGAGGTAGTGGTAAGGCCTGCACACTCTATCCTCCCCAGACATTGTGAGATTTCACTTGGTATGTTTTTGTTTTAAAGAAAAAATACATTCCATTTTTGTTTTCATATGACAATATTTGGTTAGGAATATGGAGTAGTTCAACATGTTTATTTGACTTTAGATTATATTAGTGGGTACAGAAGAACGCTCTAACGTGATTGTTGAGAAGTTAGTTTAATAGAAAACATCACATCAGAATTTACAACAACATACCCAGTGTAATATCCCACAAGTAGGGTCTGCGGAGGGTAGGATGTATGCATATATTACCCCTACCTTTCTCGGGTAGGGAGCCTGTTTCTGATAGAGACCCTCGGCTCAAAAGGAATGTTATCAAAGCAGGAATCACATCAAAATTTGAAATCTCAAAAGTTCACTGGATTTAGCTGTATTGAAATAGAACAGAAACATTTCGCAATGTCCTCAAATAGGACTTTCGTCATATGAATCGCAACTGACAGTAACCGATTATGTGACAAATTTTTGTCCTAGGCACACCATGATGGAAGGATTGATGCAGTCTTCTTTGTGTCATCGAGGGAATTTCCATGGACAGTGTCAGGAATGTAGCCAATGGGAAACTGGGAATAATGGGATCTCTTAATTTCTTTCTTTTGGAGAGCTTTTAAAGTTCTTATCAAAGCTTTTTCAACAAAATACAACTATATAGACTCTTTGAAAAGATTTTCTCTGTCGGCAATTGATTGAGAAAAGTTTGGAATTATAACTCTTTGATTTGAATCAGGAATTCAACTTGATCAGCATAATTGGACAAACTGTCAAGCTGCCTCTGTTGTCTGGATAGTCTTGTTGCAGGCACTGCCTAGTTTAATTTGCAATTCCAACTTTTGGATTCGGTAATGAATACTTACTTTCACTTCAGCACTCGTATGATTCCTATGTACAGTAACAAATTAAAATTTGAATTTCTAAAGTCTCTTCTTATATTTGTCAGCGGAGATGTGGAGGGGTTGGATGTAGTAGTCACGAGGGAGAGGTGGAGCTAGAGTAGGCTGAAAAAGTATTAAGGAAAAGTGATTAGACACAACATGATGCAGCTTCTGACCTTAGATAAGAGGGAGAGGGAATGGAGACTGCGGACCGCCTAAAAGGGTAGAAGATTATAGCTAGTGAACTGTTGTGCTTTCGAATTTCGATGTTTCAAGCTTATTGGTATTCTTATAGTTGTAGTTTTTGATATGTATATTCATTTGCTTATTGTGGTTCGCCTACTGCACTATTTTGTTGTTGTTCATGTTCTTTTCTTTGTTGGCTTTGCACTGCTTTTCTAATTAGTTGTTATTTTTTTGGTCACTGTTTTCTTCTTTATACCTGAAATTGCTGCACTTGAGCCATGAGTCAACCGGAAACAACCTCTCTACCTCCACGAGGTAATGGTAAAGCCTACATACACTCTACCCTCCCTAGACGTCACTTGTGGGATTTCACTTGGTATTTTGTAGTGTTTGTTGTTGTTGTTCTTCTTCTCATATTCACTTCTAAGGCACTGTTTGGATAGAAAATGCTTTTTTTTTATTTATGTTTTAAAGAAAAAATACATTCCATATTCGTGTTCATATGACAATATTAGGAATGGAGTAGTTCAACATGTTAATTTGACTTTAGATTATATTAGTGGCAATAGATTAAAGCTCTAACGTGATTGTTGAAAAGTTAGTTTAACAGAGAAAAAATCACATCAGAATTTACAACAACATACCCATTGTAATATCACACAAGTAGGGTCTGGGGAGGTAGAATGTACAACTGTGGATGAAATGTTGTGCTAAGAGTAACCTGAGTATCAAGACCTTTCTGAAATGACTTCCAGAAATGAGAGGTAAACTAAGATACATTTCCCCTACCTTGGACGCTGTTTTCGATAGAGACCCTTGGCTAAAAAGGAATGTTATCAAAGCAGGAATCACATCAAAATTTGAAATCTCAAAAGTCCAGTGGATTAAGCTATATTGAAATAGAACGGATCATTTTGCAATGTCTCCAAATAGGAATTTTGTCATATAAATTGCAATTGAGACAGTAATTGATTATGTAACAATTTTTTGTTTTAGGCACGCCATGATGGCAGGATTGATGCAGTCTTCTCTGTGTCATTTCCGTGGACAGTCTTTTCAGGGATGCAGGCAATGGGAAACTGGGAATATTGGGATCTCTCAATTTGAGCTCTCAACTCAGGGCACATCGGGTCCTTGCATATGCCCAACAAAGGATGAACAAAGGTCAACTACGGAAGACGTTGTCTCAGCAAACTTCCCTCATCATCAGTCAGGTGACAAATTTTGATATCTCCAGCTTTATATGTAGTTGACTATAAAATCTGAGTTGTCATTTTTTCTGCTGATCTTTTCACCACACTGTGGCCGGCATAGATATGACTTCCTTAGGCTATTTAGTGTATTTGTTTTCATATTTGAGTTGAGGTAGCACCATCCAAAGACATTGTCATAGCTTTGTTTTACAACTTAATCAGGTCATGAATTTAATCTGTGGTTAAAGCCATCAAACAGAAGAAAATTCATTGATGTTTTGTTTCTTTGGAAATTTCCTATCACATGAGGTATTTTTCGTTGAGAAGAGTCCTGCACGAACTGAACTAGATATAGCAGGTATTGTGTCTTAAAATCAGCTTGGAATTACTTCAATCATTGGCCTCCTCCTTTCAACTCGGGATGCTTAATGCTACCTTTTTTTTTATAAAGGTAAAGTTGTATTCTTCTGCATTAAAGGTATGCTGGCTACCTCCAAAAAGTTACAAGCTATTTCCATAATGACATAGATCCTAGGAAATCTACCAATTTGTTCTACTTCTTCTATACTATCTTCTTTACACATAAAAACATGTTAATGCAATTTTCTTTAACCTTCGGAATAGTGTTAGTAATATTCTAATGCACCTGAGATTTCTCTCTCCAAATAGCCCACCAGACACAAATAGGTACCCTAATGCTGCTACCTGTTATTTAGTGCTACAGGCTAATTGCCATAAAATCTCTTATTAGATCTTCTGTTGCAGGAGGTCAAGCATTTTTCTATTGCACCCATTTACTTTGCTACTTAAGTAGATCTACTAAAGGAAAAAACCATTCTTACTGTAATTGTATTTTCTTTCTTCTTGATTCAATGATTAACAATTTGAAACTAGGTGTGGCTCTTTCTTAAAGATAATAGGTTAAGATTTAATTGAAGTTAGCTATTCCAAGATATATGGCACAAGTGCCTCCTAATGTGGATGTAAAGCTTTCTGGTAGGGGCACGAAGCTTCTTATAGTGGTTCTTAAAAAAGTATTCTCACTGTAATTTTATTGTCTTTCCTGTAGATTCAATGATTAACTACTTGAAACTAGGTTCTACTCTCCTTAAAGATCGTTGACTAAGATTTGATAGAAGTTAGCTATTCCAAGAGATGATGCGAGTGCCTTTTAACGGATGTGAAGTTTTTCGGTAGGGGCAAGAAGCTTCATAAAGCGGTTCTTAAAAAACTATTCTCACTGTAATTTTATTATCTTTCTTGTTGATTCAATCATAACAATTTGAAACTAGGTCCTACTACTTAAAAATCATTGATTAAGATTTGATAGACGTTAGCTATTCCAAGAGATATGGCGCGAGAGCCTCCTAATGGATGTGAAGCTTTCTGGTAGGGACAAGAAGCTTTATGAAGTGGTTTCTGCTGGATGAGATGAGTAGAAGTCTTGATTTCTTTTCTACAAAATAAAAACATGAGTTTGCGCCCTCTTGCCCTATCCTAGGTGGTCAGGTTTACTTGGAACCTAGACTGTCAGGACTAGCTAGTTTCCCAGTGAATTATTGAGGTGTGCCAGGCAGACCTGAACCATAAAAAGGAAGTTAGAGAACTCTGTTTGGTGCTTGAAGTTAAAGAACTTGAGGCAGTTATTCATTTGGATGTTCGATTATCTTGTAGATGAGTAGAATCATCACCATCAATAAGAAGAAGAAGCTAGAGAATTCTTTTTGGTGTTTAAAGTTAAAAAACTTGCTGCACAAAAATGCTTCATAAATTTGGCTTATCTTTTATCATTTCATGTTTGATTATTTTGGGATCAATAAAGATGATGGAAAAGTATACCTCTTACACAATTAAATATTAAATACGTTTAAAATTCAAGTGTAATTACGTGTTCCTTCGTAGGCCTTTCCCAGATATCAAACAATCATCTCAGAACTGGTACAGACAAGGGGAATCTGAAGAATAAAGTGCAATTACGTGTCCTAATATCTTAGGCCCTATTTTTTGCATTAAGATGAAGACATTTGAATTTGAATGCACATTAGAGTGATTAAGGTTGTTTGTTTTTTAACATCTGTATATGCATAATTTATTTATTTTTAAACATAATTAATATACAATTCAAATAAAAAAGTTATTTAAATATTAGAAAAATATATACAATAAAATCATTATTTGATAAAAAATGAATCATTTATATTCGCTAGTAATGGTGTAACTGGATTGCAGTGGCGGTGGTGATGGTGATGGTTGGTACTAGTGGCTAGTAATGGTGGTGGTGATAGTTATGTTGGTGAAGGTGGCTGGTGTTGTAGTGGTTGTTGCGATGGTGGTGGTGATGATGATTGTTAGTAGGTTGATGATAGTAGTTAGTGGTGGCGGAAGAATGTGAGGTGGTTGATGATGGTGTTAGTGTTGGTGGTAGTTGGCGGAGGTTTTAGTTGTAATTGTGGAGGTGGTTGTTAGTAGGAATTGTCCAGAGTGGTGGTAGTGACCGGTAGTGGTAGCGTCATTAGATATAATTAATGATGGAGGTGTTAGGTGTGGTATCGACTAACAATAGTGGTTGACAGTGGTAGTTGATGACAAAGGTGGTTGGTGCTTGGTGACGGTTCGTGTGGTTGACCGTGGTTATGGTGATGGTAGAGGTGGGCGGTTGTCGACAAAGTGGTACTTAATAATATTACACTTTATTCAATGTTTTAATGATTTAGACCAATTCAGAACAAATAAATGTTTAAATCTTAACGTAAACAAATGCATTTAATGCCTAAGGTTTGAAATATTCAGATTTAGACCTCCATGAAGTGCAAAATATTGAACCCTAAGACTTACTTTGCATGTGCTGATTATCCTTGGAAAATAAATATGCCTGAGAACTATAAAGGGAAAAGTACTGCCCAATACCTATGGGCCATCTAGTTTACAAAATATGTATACAATGTATATGTAGTGTATGCTTAATACTAAATATTGTACATGCCTCTAGTGTATATTCTGGTCATGTATGGTAAATTAGATAGTCAAATAGTATATATTGGTAACCATCCCAACTGTAAATCCCCTTTTAATAAAAAATAGATCAACTGAAGGACATCGCAATTGTTGCATTTAGGTCCATATGTATACCTTTGAGTTTTCTTGTTAAATCTCAACCCTTAGTGTCATGTAAGTTATACATTAAAATATAGCTCCGAACAAATATGTTTGTGTGATTGTGATTAAAGTTATGTCTGCATGCTTTTGTATATGTGTTGAAACTGAGAGCATTTAAAGCTATCTTTATGTGATTATCTTCACTTGTTCAATTTTGCTTTCTCCTCTTGGGCAGGTTGCGTATAAACTTGTTAAATTAAATGTCTAAGCGGTAGTCAATGTCGCGTTCTCTACTCCGTTTTTCGTAATTTGTTTTTTTCTGCTCACTTTAGTGTGTGTGAAACCTAGGTTAGCCTTTGAACCAAAATGGGAAATAACATTAAAATTCTGAATACTTCTTCACAACTTAAGTGGTTGAAGCAAATGCCTACCATTTCTTCTCCGAATTTCCCCTCTTACCCTCTTCAACAGCAGAGGCAGCATCGAATGCTTATACCGAAATAATTAGCTTCACTTCAACACTTGTGTCAAAAATCAATGCTTTTGAACCCAGAAGAGTTATCGCAAACTGCACAGCCGGCACAACAGCAATTGGGGTATCCGCAGATGCATCAGAATCAGCAGCTCCAACAGCAACAACAACAACCTCAGCAGGTTTTGCATCAGCAGCAATCTTCTCCAGCAATGAATTCCCCTGGTGGTCATAATTTACTGAGTTTGACTGGATCAGAACCAGATGCCACTGGATCTGGGACAACGACTCCTGGGAGTAGTTCAAGCCAGGGGGCTGAAGCAAGCAATCAGTTTCTTGGGAAGAGAAAGATTCAGGATTTAGTTTCACAGGTTTTCCCTTAACCTTCTTAATCTCCAAAGCTTTCTGTTTTCCTTGGTGGTTACTCAAGCCAACGTTGGAATCAATTAATTTTTATTTATTTTCACAATCAATTAAAAAAAATTGGTCCACAAAGTATGTGAAAAGGCTGTTTTCGGCAGACCCTCGTTCAAGGGAAAAAAATAGCATACTTGTAAAAACAGTTAATTTCTATACATAAGTTTTGTGGTTATTAACACTGCAACTTTTTAACATCTTTCCACATATTATGATAATGTTCCAGGTGGATCCTCAGGGAAGAGTTGATCCTGAAGTTGAACAGTTTCTTTTAGAGATCGCTGATGACTTTATTGATTCGGTGAGGCATAGAAATGATTTTTTCTTTGTTATCGTTATCTTTTTTGTTAGGATTGCGTCAGGAGGTTGGGAGACTGCGGGTTTCATGTTTTGCATGCTGCCTTTCTCATTCATTCACGGTTCAAGTTCTAAGATTGTTAGCTTTGATAACTGTGGTTGAATACATTGACATAGCCAGTAAAGAGGATTTTTTCTTGAAGGGTCATCGTATGCTGATTCTGGACTCTTCCTTTCACACTTACCCTTCACTCAAATGTAAACTAAAAATTTTAAAAATAATAATAAAAGACCCCCCTATTTTCCCATTTTTGAGTTGTAATGCCAAAAAAAATATCAAAGGCATGACAAGGAACCTTTTTTAAGAAGAGTTTCCTTTTGAAATACTTTCTTGAGAAACATTGATTGTTTGTCATTTTCTTTGCTAAGTTTCATGTTCCATTCCTCTTTGTAGGTTACTACATTTTCTTGCAATTTGGCGAAGCATCGGAAATCTTCGACTCTGGAGTCCAAAGATATACTGTTACATTTAGGTTTGTGCCAGCAACTGCAAAATATGCAGAGTTGTTTTACTTTGTTTTGTTTTTACAGAAAAAACAAGCTATTTATCATTATTTTAGAATATAAAAGGAGTCATTTCATACTTCATCAAAGATGATAGAATTATAGAAATAAAAGGTCCTAGTTGTTGCATATATTTTCATAATAAGTTCATTTTTATTGCTTTCCGTTAGTGAGTGTGTTTTTTACATGACTATATGGTGAGATCCTCTGCATTTAGCCTATACACAGGTTTTCTATCTGGAATGTAATTAGAGTTACAAAATTTGACACATACTCCTATTGACTCAGACTGGGACCAAACTTCGTTTTCATGTCAGTACAGTGTACCAACAACCATCAGTCTCCACAGTTTAATGTCTTTAGCTCTTTGAGCTTTTTAGCTACTTATGCGTTCAGCCAACTAGTAAAATTTGTATTCCACCACCTTATAATGTATGCTTCAAGAGTTGCTGGTGAGTATATGATGAGAACAGTTTGAATTGCTAAGCTTTCTCTTTAGTTGTCAGGAGTGGCTTTGAAGTGAGGTGTGACCTGAGTCCTGACTTAGTTAAATTGTTGAGTATCTGAATAGTCCTAGTTGCATCTGAGAGAGTGATTGAGTCACACTGTCATTGTATACAGTATATATAATGGTTTACCTTTTCGTGAATAGATTTTGACTTCCTCATTTGTTTAGAACATGCACAATGCAACTCTATCTTATTCCAACACATCAATACCTGGTAAAATTTTGTTAGGCAACAGCTTTCTGCTTTGCCTAATGCAGTTGATTTGCTATTTTTGGCGGAAAGGCTGCTTCATGATCTCATCAATGCAGTTGTTCCTGGGAATGTTTACATTCGGTCTATCACTGCTTAAGATGTTTTATAACAGAATTTGATTTAGAAAGAACAAAAAATATGGTATTAGTCTAAGTTAACTATGATGTTCTTTACAGAGAAAGATTGGAATTTGACTGTCCCAGGTTTTTCAAGTGAGGATAAGAAACACTGCCCTGAACATGTAAGCTCTTCTTCCTCTCTAACTTTCATGGGTGGTATACTGGTCTATCTTATATCTACAAATAATTGAGGAGTTCTGTAAGTTGTAACCAATAGTTAATTATGATCCATGGCCTCTGAATACTGGAAGTACTCGATAACATATTTCTTGAAAAAGGAAAAGAAAGGCTCAATAACTTAGCTTTTTGCCCAAGTCTTGTTTATTATAAATTTAAGTTTCTGATTACAGTGCACTCATCGCGTTATAAGTACCTCTTGATCTCTTTCTGGTCAATGATTGTTGTAACTTTAAGCTGAGTGGAAATTCAGGCTGTTTTATTGACAATATGTTTCTAAACTTTGTGCAGTCATCAGGTGATCTCTGCAAAGAGCGTTTGGAAATGGTGAGTTGAGAGTTGTTTTGTGTTAATACTACCTGCATTTATTTTAGGTGTATGATTCATAGTCTTTGTGCTTGACTCAGATACCTGATATGATGGAGGCTTCACCACAAGCTGAAGCAAGTACAAGCAGCAGCGCGAAGGAGATCGTAAGTCCAGGGCTGGGTGACCAGGTTGGTTCGACTGACATAATCGGACCACCAAGTTCAGAGGAATTGGCTTCACCATCTAATGGTGAAATATAGTTCAACTATAACAAGATGTGATGTTCCGTGGAGATTGGTATACCCCTTGCTTTACTGTAATAAAACCTTTTTCAACTTTAGTTTGCTTGTCGACTGAAGAACGTGAACATAAGTCTGTTATGAATATTCATGACCTTTTGTTGGTATGTTATGTTAAGTTTTCTTTATTATTT</genome_strand>
        <mrna_strand>AAAATCCATTTTCCATCTCCGACAACACACCCAGAACACAATTATATTGAGCATATGGATATTTAGCTATTTTT--GAAAAAATGCTGAATTTTCTTATCAAAGCTTTTTCAACG-AACACAACAACAAATACTCTTCCAA--TT-TTTTTTTTAACCATATCCTGTCGGCAATTGATTGAGAAATCAGCAACCTGTTGATTTGAATCAGAATTTTCTCCGGTCAAGCTTGTTGCAGGCACTGCCCAGTTCAACTTGCAGTTTCAGCTTCTGGATTTCG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATTCAACTTGATCAGCATAATTGGACAAACTGTCAAGCTGCCTCTGTTGTCTGGATAGTCTTGTTGCAGGCACTGCCTAGTTTAATTTGCAATTCCAACTTTTGGATTCG..................................................................................................CGGAGATGTGGAGGGGTTGGATGTAGTAGTCACGAGGGAGAGGTGGAGCTAGAGTAGGCTGAAAAAGTATTAAGGAAAAGTGATTAGACACAACATGATGCAGCTTCTGACCTTAGATAAGAGGGAGAGGGAATGGAGACTGCGGACCGCCTAAAAGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACGCCATGATGGCAGGATTGATGCAGTCTTCTCTGTGTCATTTCCGTGGACAGTCTTTTCAGGGATGCAGGCAATGGGAAACTGGGAATATTGGGATCTCTCAATTTGAGCTCTCAACTCAGGGCACATCGGGTCCTTGCATATGCCCAACAAAGGATGAACAAAGGTCAACTACGGAAGACGTTGTCTCAGCAAACTTCCCTCATCATCAGTCAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAGTTATCGCAAACTGCACAGCCGGCACAACAGCAATTGGGGTATCCGCAGATGCATCAGAATCAGCAGCTCCAACAGCAACAACAACAACCTCAGCAGGTTTTGCATCAGCAGCAATCTTCTCCAGCAATGAATTCCCCTGGTGGTCATAATTTACTGAGTTTGACTGGATCAGAACCAGATGCCACTGGATCTGGGACAACGACTCCTGGGAGTAGTTCAAGCCAGGGGGCTGAAGCAAGCAATCAGTTTCTTGGGAAGAGAAAGATTCAGGATTTAGTTTCACAG................................................................................................................................................................................................................................................................................GTGGATCCTCAGGGAAGAGTTGATCCTGAAGTTGAACAGTTTCTTTTAGAGATCGCTGATGACTTTATTGATTCG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTACTACATTTTCTTGCAATTTGGCGAAGCATCGGAAATCTTCGACTCTGGAGTCCAAAGATATACTGTTACATTTAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAAGATTGGAATTTGACTGTCCCAGGTTTTTCAAGTGAGGATAAGAAACACTGCCCTGAACAT..........................................................................................................................................................................................................................................................................................................................................................TCATCAGGTGATCTCTGCAAAGAGCGTTTGGAAATG..............................................................TCTTTGTGCTTGACTCAGATACCTGATATGATGGAGGCTTCACCACAAGCTGAAGCAAGTACAAGCAGCAGCGCGAAGGAGATCGTAAGTCCAGGGCTGGGTGACCAGGTTGGTTCGACTGACATAATCGGACCACCAAGTTCAGAGGAATTGGCTTCACCATCTAATGGTGAAATATAGTTCAACTATAACAAGATGTGATGTTCCGTGGAGATTGGTATACCCCTTGCTTTACTGTAATAAAACCTTTTTCAACTTTAGTTTGCTTGTCGACTGAAGAACGTGAACATAAGTCTGTTATGAATATTCATGACCTTTTGTTGGTATGTTATGTTAAGTTTTCTTTATTAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLe0093P23-Kdhrz/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U343351" ref_strand="+" ref_description="SGN-U343351        Tomato 200607 #1 [1 ESTs aligned]">
      <seq>tggttatggtgatggtagaggtgggcggttgtcgacaaagtggtacttaataatattacactttattcaatgttttaatgatttagaccaattcagaacaaataaatgtttaaatcttaacgtaaacaaatgcatttaatgcctaaggtttgaaatattcagatttagacctccatgaagtgcaaaatattgaaccctaagacttactttgcatgtgctgattatccttggaaaataaatatgcctgagaactataaagggaaaagtactgcccaatacctatgggccatctagtttacaaaatatgtatacaatgtatatgtagtgtatgcttaatactaaatattgtacatgcctctagtgtatattctggtcatgtatggtaaattagatagtcaaatagtatatattggtaaccatcccaactgtaaatccccttttaataaaaaatagatcaactgaaggacatcgcaattgttgcatttaggtccatatgtatacctttgagttttcttgttaaatctcaacccttagtgtcatgtaagttatacattaaaatatagctccgaacaaatatgtttgntgtgattgtgattaaagttatgtctgcatgcttttgtatatgtgttgaaactgagagcatttaaagcta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLe0093P23-Kdhrz/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06SLe0093P23.1" temp_strand="+" temp_description="C06SLe0093P23.1  AC216659.1 htgs_phase:1 submitted_to_sgn_as:C06SLe0093P23 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="33609" stop="34859"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33909" g_stop="34559" g_length="651"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="652" r_length="652" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLe0093P23.1" gen_strand="+" ref_id="SGN-U343351" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>651</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLe0093P23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U343351" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33909" e_stop="34559"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGTTATGGTGATGGTAGAGGTGGGCGGTTGTCGACAAAGTGGTACTTAATAATATTACACTTTATTCAATGTTTTAATGATTTAGACCAATTCAGAACAAATAAATGTTTAAATCTTAACGTAAACAAATGCATTTAATGCCTAAGGTTTGAAATATTCAGATTTAGACCTCCATGAAGTGCAAAATATTGAACCCTAAGACTTACTTTGCATGTGCTGATTATCCTTGGAAAATAAATATGCCTGAGAACTATAAAGGGAAAAGTACTGCCCAATACCTATGGGCCATCTAGTTTACAAAATATGTATACAATGTATATGTAGTGTATGCTTAATACTAAATATTGTACATGCCTCTAGTGTATATTCTGGTCATGTATGGTAAATTAGATAGTCAAATAGTATATATTGGTAACCATCCCAACTGTAAATCCCCTTTTAATAAAAAATAGATCAACTGAAGGACATCGCAATTGTTGCATTTAGGTCCATATGTATACCTTTGAGTTTTCTTGTTAAATCTCAACCCTTAGTGTCATGTAAGTTATACATTAAAATATAGCTCCGAACAAATATGTTTG-TGTGATTGTGATTAAAGTTATGTCTGCATGCTTTTGTATATGTGTTGAAACTGAGAGCATTTAAAGCTA</genome_strand>
        <mrna_strand>TGGTTATGGTGATGGTAGAGGTGGGCGGTTGTCGACAAAGTGGTACTTAATAATATTACACTTTATTCAATGTTTTAATGATTTAGACCAATTCAGAACAAATAAATGTTTAAATCTTAACGTAAACAAATGCATTTAATGCCTAAGGTTTGAAATATTCAGATTTAGACCTCCATGAAGTGCAAAATATTGAACCCTAAGACTTACTTTGCATGTGCTGATTATCCTTGGAAAATAAATATGCCTGAGAACTATAAAGGGAAAAGTACTGCCCAATACCTATGGGCCATCTAGTTTACAAAATATGTATACAATGTATATGTAGTGTATGCTTAATACTAAATATTGTACATGCCTCTAGTGTATATTCTGGTCATGTATGGTAAATTAGATAGTCAAATAGTATATATTGGTAACCATCCCAACTGTAAATCCCCTTTTAATAAAAAATAGATCAACTGAAGGACATCGCAATTGTTGCATTTAGGTCCATATGTATACCTTTGAGTTTTCTTGTTAAATCTCAACCCTTAGTGTCATGTAAGTTATACATTAAAATATAGCTCCGAACAAATATGTTTGNTGTGATTGTGATTAAAGTTATGTCTGCATGCTTTTGTATATGTGTTGAAACTGAGAGCATTTAAAGCTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLe0093P23-Kdhrz/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U339975" ref_strand="+" ref_description="SGN-U339975        Tomato 200607 #1 [1 ESTs aligned]">
      <seq>ttaacccaatttacgacccgattgtatcccatatccgacccgtatccctgcgtaatcacctcgacaccaatctatgataccctagttcttgggggcatcataatcttcaacagttcctctttgattcttacaaatttctggaataaatcaacattttgggatcgtttttttgggccccatttggttgattcctcgagattagagagacaattggtgggttgccaaatattttgcagattgatgaaccctatctatttatgcctgattgttaaattaggggaaaattttgcttaaaattga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLe0093P23-Kdhrz/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06SLe0093P23.1" temp_strand="+" temp_description="C06SLe0093P23.1  AC216659.1 htgs_phase:1 submitted_to_sgn_as:C06SLe0093P23 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="40594" stop="41485"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="40894" g_stop="41189" g_length="296"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="300" r_length="300" r_score="0.922"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLe0093P23.1" gen_strand="+" ref_id="SGN-U339975" ref_strand="+">
        <total_alignment_score>0.922</total_alignment_score>
        <cumulative_length_of_scored_exons>296</cumulative_length_of_scored_exons>
        <coverage percentage="0.987" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLe0093P23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U339975" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="40894" e_stop="41189"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTAACCCAATTTACGACCCGATTCTATCCCATATCCGACCCGTTTCCCTGCGTAATCACCTCGACACCAATCTATGATGCCCTAGTTCTTGGGGGCATCATCATCTTCAACAGTTCCTCTTTGATTCTTACAAATTTCTGGAAGAAATCAACATTTTGGGATCGTTTTTTGGGGACGCATTTGGTTGATTTCTCGAGATTAGAGAGACAATTGGTGGG-TGCCATTTATTTTGCAGATTGATGAACCCTAGCTATTTATGCCTGATTG-TAAATTTGGTGAAGATTTTGCTT--AATTGA</genome_strand>
        <mrna_strand>TTAACCCAATTTACGACCCGATTGTATCCCATATCCGACCCGTATCCCTGCGTAATCACCTCGACACCAATCTATGATACCCTAGTTCTTGGGGGCATCATAATCTTCAACAGTTCCTCTTTGATTCTTACAAATTTCTGGAATAAATCAACATTTTGGGATCGTTTTTTTGGGCCCCATTTGGTTGATTCCTCGAGATTAGAGAGACAATTGGTGGGTTGCCAAATATTTTGCAGATTGATGAACCCTATCTATTTATGCCTGATTGTTAAATTAGGGGAAAATTTTGCTTAAAATTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLe0093P23-Kdhrz/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U325074" ref_strand="+" ref_description="SGN-U325074        Tomato 200607 #1 [5 ESTs aligned]">
      <seq>tctcagcaaaatgtgagtcctccttctccgccgccgccgccgtctaaccaatctcctcctccaccgcctccaccaccatcaccagggcctcctcctcctccatcccagcaaaaataccattctccaccaccaactaaatctgtgaattctgcgaccacctcggagagtaaacactctaatcatgataaaaaacaccataactcttacgggaaatcgcatcaaccagcaaagaaaaagaagccaaatttggggaagaaactggggttagtgtttgtgggtgttgctgggatgttgcaggtgtgtgtggtggcgttcttgctaataaagagaagacaattgttaaaggctggtagtagattttgaatgaacatttgaatatggatgtatatcagttagtctaattaattcagaattttacgagaccgcgaaaggcaatgaacacggcattgatgaattagaagcattgggttcatctgacatgtagatttctgcatttgcattggtggctactgtaaatttgagcatgttgagaaatacagatgaatgtgcagacttcggatgctttgtttctagttgctcgtctcaaagttgtaagaatgatatcttgcttcgtttgtcaattttaaggaactgtactggatttgttctggagaacatagtgttacgtcttctctgtccggtgagtaaaaaatgtagggaaacgagcatactgttgatgaaggcatgacctgtcatcgtcgcaactgaaatatgatttctaatgtagaggtttaacactgtaaaactcttttaactgttggtatagtctaactgttgcatctgatatgaaaactttctaatacgctggcaaaataatatctaccttgattcttaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLe0093P23-Kdhrz/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06SLe0093P23.1" temp_strand="+" temp_description="C06SLe0093P23.1  AC216659.1 htgs_phase:1 submitted_to_sgn_as:C06SLe0093P23 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="41101" stop="43476"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="41401" g_stop="41920" g_length="520"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="520" r_length="520" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="41921" i_stop="42313" i_length="393">
            <donor d_prob="0.937" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="42314" g_stop="42372" g_length="59"/>
          <reference_exon_boundary r_type="cDNA" r_start="521" r_stop="579" r_length="59" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="42373" i_stop="42877" i_length="505">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="42878" g_stop="43179" g_length="302"/>
          <reference_exon_boundary r_type="cDNA" r_start="580" r_stop="881" r_length="302" r_score="0.983"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLe0093P23.1" gen_strand="+" ref_id="SGN-U325074" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>881</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLe0093P23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U325074" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="41401" e_stop="41920"/>
          <exon e_start="42314" e_stop="42372"/>
          <exon e_start="42878" e_stop="43179"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTCAGCAAAATGTGAGTCCTCCTTCTCCGCCGCCGCCGCCGTCTAACCAATCTCCTCCTCCACCGCCTCCACCACCATCACCAGGGCCTCCTCCTCCTCCATCCCAGCAAAAATACCATTCTCCACCACCAACTAAATCTGTGAATTCTGCGACCACCTCGGAGAGTAAACACTCTAATCATGATAAAAAACACCATAACTCTTACGGGAAATCGCATCAACCAGCAAAGAAAAAGAAGCCAAATTTGGGGAAGAAACTGGGGTTAGTGTTTGTGGGTGTTGCTGGGATGTTGCAGGTGTGTGTGGTGGCGTTCTTGCTAATAAAGAGAAGACAATTGTTAAAGGCTGGTAGTAGATTTTGAATGAACATTTGAATATGGATGTATATCAGTTAGTCTAATTAATTCAGAATTTTACGAGACCGCGAAAGGCAATGAACACGGCATTGATGAATTAGAAGCATTGGGTTCATCTGACATGTAGATTTCTGCATTTGCATTGGTGGCTACTGTAAATTTGGTAATTCTTGATCAATATGCATATTTATCTTACGTTTTTCTCGTTTATTATGAATGAGTATCAATGCATCATGTATTACTAGTGTGAATGATTTAGAACTCATTGTGATTTTTATGTGTTCCATTATTTCGAAATCTACTTTCTCTGTAATTGTGCTGCTGCTTTAAGTGAGCATTTATTCAACGGATGGATCGATAAAATTAAACATTCCGGTAGTCTGAAGCTGCTAACAGCTTTTGTCAAAAGTTATGTATGATGAGTCCCTTTTTGCTGGAATATTCCGAATATGTTTGTTATTAGGTTTGGTCTGCTCTTTAGCTGAAATATACTGTACTGCTGGAAAGCTTTATCCTTTTTCGATGATAATGAACTATAAAGAATGTACTTTTGCAGAGCATGTTGAGAAATACAGATGAATGTGCAGACTTCGGATGCTTTGTTTCTAGTTGCTCGTATGTGTAAGAATCAATTTGAAGTTCTCGATAAGATCATTTGTAGGTCTCAATCAAGCATAACAATTCAATTAAGAAAGAGAAAAGGATTATAGTGAAAACTCATGGTGCTATGTGAATTTTTACTCTCTTTTGCATTTAACTGATCCTACCATTTTTACTAGTTTAGAAGAAACTAACTAATTCAAGTAACGGTTAATGTAGATGAGGTGAACCTTTGGTGTTTGCACCTGGTTGCACGTACCTTGACTAATCCACCGAACATTCCAAAGAATGGGGAGTAAATAGATACTCCGACTTCAATTGAATGCAGAACTAATTCTTGATGATGGGATTTGCTTGGTTTGTCCTAGAATTTACTTGCTATTTGTTCGCGGCTGCTAAAAAGTGTTTTGAAGTTCTGTCTAACAGCAAAAATACCTTAGTTACTGCTTGTGCTTCCTTGTTGTGTTTCTGTAGGAATAATGCCAACTCTTCATGACTCCTGTGTTTTTTGGTATTGCAGGTCTCAAAGTTGTAAGAATGATATCTTGCTTCGTTTGTCAATTTTAAGGAACTGTACTGGATTTGTTCTGGAGAACATAGTGTTACGTCTTCTCTGTCCGGTGAGTAAAAAATGTAGGGAAACGAGCATACTGTTGATGAAGGCATGACCTGTCATCGTCGCAACTGAAATATGATTTCTAATGTAGAGGTTTAACACTGTAAAACTCTTTTAACTGTTGGTATAGTCTAACTGTTGCATCTGATATGAAAACTTTCTAATACGCTGGCAAAATAATATCTACCTTGATTCTTGAATAATGT</genome_strand>
        <mrna_strand>TCTCAGCAAAATGTGAGTCCTCCTTCTCCGCCGCCGCCGCCGTCTAACCAATCTCCTCCTCCACCGCCTCCACCACCATCACCAGGGCCTCCTCCTCCTCCATCCCAGCAAAAATACCATTCTCCACCACCAACTAAATCTGTGAATTCTGCGACCACCTCGGAGAGTAAACACTCTAATCATGATAAAAAACACCATAACTCTTACGGGAAATCGCATCAACCAGCAAAGAAAAAGAAGCCAAATTTGGGGAAGAAACTGGGGTTAGTGTTTGTGGGTGTTGCTGGGATGTTGCAGGTGTGTGTGGTGGCGTTCTTGCTAATAAAGAGAAGACAATTGTTAAAGGCTGGTAGTAGATTTTGAATGAACATTTGAATATGGATGTATATCAGTTAGTCTAATTAATTCAGAATTTTACGAGACCGCGAAAGGCAATGAACACGGCATTGATGAATTAGAAGCATTGGGTTCATCTGACATGTAGATTTCTGCATTTGCATTGGTGGCTACTGTAAATTTG.........................................................................................................................................................................................................................................................................................................................................................................................................AGCATGTTGAGAAATACAGATGAATGTGCAGACTTCGGATGCTTTGTTTCTAGTTGCTC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTCAAAGTTGTAAGAATGATATCTTGCTTCGTTTGTCAATTTTAAGGAACTGTACTGGATTTGTTCTGGAGAACATAGTGTTACGTCTTCTCTGTCCGGTGAGTAAAAAATGTAGGGAAACGAGCATACTGTTGATGAAGGCATGACCTGTCATCGTCGCAACTGAAATATGATTTCTAATGTAGAGGTTTAACACTGTAAAACTCTTTTAACTGTTGGTATAGTCTAACTGTTGCATCTGATATGAAAACTTTCTAATACGCTGGCAAAATAATATCTACCTTGATTCTTAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLe0093P23-Kdhrz/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U320278" ref_strand="+" ref_description="SGN-U320278        Tomato 200607 #1 [11 ESTs aligned] arabidopsis/peptide: | Symbol: None | protein kinase, putative, similar to auxin-regulated dual specificity cytosolic kinase (Lycopersicon esculentum) gi:14484938:gb:AAK62821 | chr2:2287235-2289304 REVERSE | Aliases: T6P5.14, T6P5_14(evalue: 1e-144, score=510) genbank/nr: gi|14484938|gb|AAK62821.1| auxin-regulated dual specificity cytosolic kinase [Lycopersicon esculentum](evalue: 0, score=946)">
      <seq>aaactcatttccctgtttggtttcattgacacattttgttcaacaccttgtaagcaataaaaattgacaccaaactgatcaaatttcatcggatttagtataacagctatggctacttgcggaattgactggaaatctgttctgccaaactgttttaagggcaataatgttcgttcggaggcgaaggtgatggagaacagtaaacagatgaattctgatcatcatagattagctttttctgatataagtactgattctagatcagtacttatatcattggatgacctttcatcgaacgctgtcattggttcaaatcttcatgtattcacatatgaggaacttaaactcatcactagtgatttctcctcagctaattttctcggtaaaggtggatttggacccgttcacaaggggtttattgatgacaagattaagcctggtttggatgctcaacctgttgctgttaaattgcttgatttggatggaaatcagggccatcaagaatggctgactgaagtggtttttttggggcaattgaggcatcatcatctagtgaagttgattggatattgttgggaggaggagcagagacttctcgtttacgagtatatggcaaggggaaacctcgaggatcaactattttcgagatattcgagttgtttgccatggttgaccagaataaaaattatggttggtgctgcaaagggactggctttccttcacggagaagaaaaaccagtaatctaccgcgattttaaggcttctaacatcctcttagactcggattacagagccaaactatctgattttgggctagcaaaggatggaccggaaggcgatgacacacatgtctcaactcgtgtgatgggcactcatggttatgctgctccggagtacatcatgactggtcatttgacaagcaagagcgatgtgtacagcttcggagtagttttgttagaacttataacaggacgacgagccatggacaagaaacgccccctcaaagagcgaatcttggtggattgggcaagaccaatgctaagggatccacacaagcttgacagaataatggacccacggcttgaaggtcagtactcgacacaaggagccaagaaggtagctgcattggcttatcaatgcttaagccaccaccccaggtctaggcctactatgagcaacatagtgaagatcttggaaccagtcttggacatgaaggatataccaatgggcccatttgtttacgtcgttccctcctcaaaacctgacaagggaacagaaattggtgaattgaagactaaagtgaacgatgaaaacaaggcgggtgtaagggaaaacgaagtagataatgcaggggaaaacagagaggatggtaatgctaagcaacggagagtcggacacaggtataaacacaggctaaagactgatgcttctgtttactcagatactcatttgtatcacaaaactgtaaagcatgaaagaacaaacaaactaaattcttattgatcaatcgcaacgaatagaagaaagggaaaagagatttaaaatgtaaaacatatgtgaattagatagtataattaagtactccaattgtatttttttttttttttgttaaatcagtttacattttagtctcagttttgggagaaaaaaaaatccttttagtgttttcgtttttgttgttgaaagcaatgtacatagaagattcttatgacttttatcagttgtaaaaagttgtttgaacaagaaaaagttatatatgaaaacgaaaaagaatcattcttctcttctctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLe0093P23-Kdhrz/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06SLe0093P23.1" temp_strand="+" temp_description="C06SLe0093P23.1  AC216659.1 htgs_phase:1 submitted_to_sgn_as:C06SLe0093P23 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="51533" stop="54311"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="51833" g_stop="52342" g_length="510"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="510" r_length="510" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="52343" i_stop="52437" i_length="95">
            <donor d_prob="0.975" d_score="1.00"/>
            <acceptor a_prob="0.964" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="52438" g_stop="52573" g_length="136"/>
          <reference_exon_boundary r_type="cDNA" r_start="511" r_stop="646" r_length="136" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="52574" i_stop="52670" i_length="97">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.922" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="52671" g_stop="52807" g_length="137"/>
          <reference_exon_boundary r_type="cDNA" r_start="647" r_stop="783" r_length="137" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="52808" i_stop="52892" i_length="85">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.901" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="52893" g_stop="53016" g_length="124"/>
          <reference_exon_boundary r_type="cDNA" r_start="784" r_stop="907" r_length="124" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="53017" i_stop="53129" i_length="113">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="53130" g_stop="54011" g_length="882"/>
          <reference_exon_boundary r_type="cDNA" r_start="908" r_stop="1791" r_length="884" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLe0093P23.1" gen_strand="+" ref_id="SGN-U320278" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>1789</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLe0093P23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U320278" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="51833" e_stop="52342"/>
          <exon e_start="52438" e_stop="52573"/>
          <exon e_start="52671" e_stop="52807"/>
          <exon e_start="52893" e_stop="53016"/>
          <exon e_start="53130" e_stop="54011"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAACTCATTTCCCTGTTTGGTTTCATTGACACATTTTGTTCAACACCTTGTAAGCAATAAAAATTGACACCAAACTGATCAAATTTCATCGGATTTAGTATAACAGCTATGGCTACTTGCGGAATTGACTGGAAATCTGTTCTGCCAAACTGTTTTAAGGGCAATAATGTTCGTTCGGAGGCGAAGGTGATGGAGAACAGTAAACAGATGAATTCTGATCATCATAGATTAGCTTTTTCTGATATAAGTACTGATTCTAGATCAGTACTTATATCATTGGATGACCTTTCATCGAACGCTGTCATTGGTTCAAATCTTCATGTATTCACATATGAGGAACTTAAACTCATCACTAGTGATTTCTCCTCAGCTAATTTTCTCGGTAAAGGTGGATTTGGACCCGTTCACAAGGGGTTTATTGATGACAAGATTAAGCCTGGTTTGGATGCTCAACCTGTTGCTGTTAAATTGCTTGATTTGGATGGAAATCAGGGCCATCAAGAATGGCTGGTGAGCAATTTGTTTTGGCCTGAAAATTGATTTTTTTTGGTTGTAACTACTGTTTCTGATTAGTAGTAATAGTTTTAGAATTGTTGAATTTTCAGACTGAAGTGGTTTTTTTGGGGCAATTGAGGCATCATCATCTAGTGAAGTTGATTGGATATTGTTGGGAGGAGGAGCAGAGACTTCTCGTTTACGAGTATATGGCAAGGGGAAACCTCGAGGATCAACTATTTTCGAGTAAGCATTGATTTTCTTGTATGATCGATTGTAAAATGAACAAAAACTTTTGTCCCCGTTCTCGGTTTCTGATTTTTCATGTGATGTATCAAAACAGGATATTCGAGTTGTTTGCCATGGTTGACCAGAATAAAAATTATGGTTGGTGCTGCAAAGGGACTGGCTTTCCTTCACGGAGAAGAAAAACCAGTAATCTACCGCGATTTTAAGGCTTCTAACATCCTCTTAGACTCGGTAAGTTATCTACGAAGTATTGTTTTGACATTGAAAAGTTCAACACCTTTTTCAGCTAGAAACTCATAATGCTATGAATTATCAGGATTACAGAGCCAAACTATCTGATTTTGGGCTAGCAAAGGATGGACCGGAAGGCGATGACACACATGTCTCAACTCGTGTGATGGGCACTCATGGTTATGCTGCTCCGGAGTACATCATGACTGGTAATTTTTTAGATTATCAGTGTACTTTAAGATGTTATGTGTCTCATTTATCGCGTTACTTCTTAGTAGTCCCACTTATTACGAATACTTATACTTTCATTTTCTTTAAACAGGTCATTTGACAAGCAAGAGCGATGTGTACAGCTTCGGAGTAGTTTTGTTAGAACTTATAACAGGACGACGAGCCATGGACAAGAAACGCCCCCTCAAAGAGCGAATCTTGGTGGATTGGGCAAGACCAATGCTAAGGGATCCACACAAGCTTGACAGAATAATGGACCCACGGCTTGAAGGTCAGTACTCGACACAAGGAGCCAAGAAGGTAGCTGCATTGGCTTATCAATGCTTAAGCCACCACCCCAGGTCTAGGCCTACTATGAGCAACATAGTGAAGATCTTGGAACCAGTCTTGGACATGAAGGATATACCAATGGGCCCATTTGTTTACGTCGTTCCCTCCTCAAAACCTGACAAGGGAACAGAAATTGGTGAATTGAAGACTAAAGTGAACGATGAAAACAAGGCGGGTGTAAGGGAAAACGAAGTAGATAATGCAGGGGAAAACAGAGAGGATGGTAATGCTAAGCAACGGAGAGTCGGACACAGGTATAAACACAGGCTAAAGACTGATGCTTCTGTTTACTCAGATACTCATTTGTATCACAAAACTGTAAAGCATGAAAGAACAAACAAACTAAATTCTTATTGATCAATCGCAACGAATAGAAGAAAGGGAAAAGAGATTTAAAATGTAAAACATATGTGAATTAGATAGTATAATTAAGTACTCCAATTGTA--TTTTTTTTTTTTTGTTAAATCAGTTTACATTTTAGTCTCAGTTTTGGGAGAAAAAAAAATCCTTTTAGTGTTTTCGTTTTTGTTGTTGAAAGCAATGTACATAGAAGATTCTTATGACTTTTATCAGTTGTAAAAAGTTGTTTGAACAAGAAAAAGTTATATATGAAAACGAAAAAGAATCATTCTTCTCTTCTCTT</genome_strand>
        <mrna_strand>AAACTCATTTCCCTGTTTGGTTTCATTGACACATTTTGTTCAACACCTTGTAAGCAATAAAAATTGACACCAAACTGATCAAATTTCATCGGATTTAGTATAACAGCTATGGCTACTTGCGGAATTGACTGGAAATCTGTTCTGCCAAACTGTTTTAAGGGCAATAATGTTCGTTCGGAGGCGAAGGTGATGGAGAACAGTAAACAGATGAATTCTGATCATCATAGATTAGCTTTTTCTGATATAAGTACTGATTCTAGATCAGTACTTATATCATTGGATGACCTTTCATCGAACGCTGTCATTGGTTCAAATCTTCATGTATTCACATATGAGGAACTTAAACTCATCACTAGTGATTTCTCCTCAGCTAATTTTCTCGGTAAAGGTGGATTTGGACCCGTTCACAAGGGGTTTATTGATGACAAGATTAAGCCTGGTTTGGATGCTCAACCTGTTGCTGTTAAATTGCTTGATTTGGATGGAAATCAGGGCCATCAAGAATGGCTG...............................................................................................ACTGAAGTGGTTTTTTTGGGGCAATTGAGGCATCATCATCTAGTGAAGTTGATTGGATATTGTTGGGAGGAGGAGCAGAGACTTCTCGTTTACGAGTATATGGCAAGGGGAAACCTCGAGGATCAACTATTTTCGA.................................................................................................GATATTCGAGTTGTTTGCCATGGTTGACCAGAATAAAAATTATGGTTGGTGCTGCAAAGGGACTGGCTTTCCTTCACGGAGAAGAAAAACCAGTAATCTACCGCGATTTTAAGGCTTCTAACATCCTCTTAGACTCG.....................................................................................GATTACAGAGCCAAACTATCTGATTTTGGGCTAGCAAAGGATGGACCGGAAGGCGATGACACACATGTCTCAACTCGTGTGATGGGCACTCATGGTTATGCTGCTCCGGAGTACATCATGACTG.................................................................................................................GTCATTTGACAAGCAAGAGCGATGTGTACAGCTTCGGAGTAGTTTTGTTAGAACTTATAACAGGACGACGAGCCATGGACAAGAAACGCCCCCTCAAAGAGCGAATCTTGGTGGATTGGGCAAGACCAATGCTAAGGGATCCACACAAGCTTGACAGAATAATGGACCCACGGCTTGAAGGTCAGTACTCGACACAAGGAGCCAAGAAGGTAGCTGCATTGGCTTATCAATGCTTAAGCCACCACCCCAGGTCTAGGCCTACTATGAGCAACATAGTGAAGATCTTGGAACCAGTCTTGGACATGAAGGATATACCAATGGGCCCATTTGTTTACGTCGTTCCCTCCTCAAAACCTGACAAGGGAACAGAAATTGGTGAATTGAAGACTAAAGTGAACGATGAAAACAAGGCGGGTGTAAGGGAAAACGAAGTAGATAATGCAGGGGAAAACAGAGAGGATGGTAATGCTAAGCAACGGAGAGTCGGACACAGGTATAAACACAGGCTAAAGACTGATGCTTCTGTTTACTCAGATACTCATTTGTATCACAAAACTGTAAAGCATGAAAGAACAAACAAACTAAATTCTTATTGATCAATCGCAACGAATAGAAGAAAGGGAAAAGAGATTTAAAATGTAAAACATATGTGAATTAGATAGTATAATTAAGTACTCCAATTGTATTTTTTTTTTTTTTTGTTAAATCAGTTTACATTTTAGTCTCAGTTTTGGGAGAAAAAAAAATCCTTTTAGTGTTTTCGTTTTTGTTGTTGAAAGCAATGTACATAGAAGATTCTTATGACTTTTATCAGTTGTAAAAAGTTGTTTGAACAAGAAAAAGTTATATATGAAAACGAAAAAGAATCATTCTTCTCTTCTCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLe0093P23-Kdhrz/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U330617" ref_strand="+" ref_description="SGN-U330617        Tomato 200607 #1 [2 ESTs aligned] arabidopsis/peptide: | Symbol: None | expressed protein | chr1:20210688-20211208 FORWARD | Aliases: F15I1.22, F15I1_22(evalue: 1e-11, score=65.5) genbank/nr: gi|18404798|ref|NP_564651.1| expressed protein [Arabidopsis thaliana] gi|25373283|pir||C96582 F15I1.22 [imported] - Arabidopsis thaliana gi|4587555|gb|AAD25786.1| F15I1.22 [Arabidopsis thaliana] gi|14334424|gb|AAK59410.1| unknown protein [Arabidopsis thaliana] gi|17104739|gb|AAL34258.1| unknown protein [Arabidopsis thaliana] gi|21618035|gb|AAM67085.1| unknown [Arabidopsis thaliana](evalue: 7e-10, score=65.5)">
      <seq>cttttccggcgagtgaaattgcggtggctgaagtcgcagtacacgtgtttgctgaaaaaaatgagagaatattatcaatctgctgtgaaggatataatggaaaatggcggagcattggattcgtttcagcagcgtttactattggagacttcttttgctgttccggtgatgggcctttccttcaaaacttttccaaatcattatggcccttgaagtttttttttttgatgttttttttacttggaaaaacttattattattgaaaataattggaaaataaatcctcaacaatgcatcattttttaaaatattgaatagattcattacatatttctcggatcatttttatttgttcagtatttctaaaataaagcttttcacttttagcatatcaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLe0093P23-Kdhrz/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06SLe0093P23.1" temp_strand="-" temp_description="C06SLe0093P23.1  AC216659.1 htgs_phase:1 submitted_to_sgn_as:C06SLe0093P23 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="58123" stop="37873"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="57823" g_stop="57402" g_length="422"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="422" r_length="422" r_score="0.962"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLe0093P23.1" gen_strand="-" ref_id="SGN-U330617" ref_strand="+">
        <total_alignment_score>0.962</total_alignment_score>
        <cumulative_length_of_scored_exons>422</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLe0093P23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U330617" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="57823" e_stop="57402"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTTCCGGCGAGTGAAATTGCGGTGGCTGAAGTCGCAGTACACGTGTTTGCTGAAAAAAATGAGAGAATATTATCAATCTGCTGTGAAGGATATAATGGAAAATGGCGGAGCATTGGATTCGTTTCAGCAGCGTTTACTATTGGAGACTTCTTTTGCTGTTCCGGTGATGGGCCTTTCCTTCAATACTTTTCCAAATCATTATGGCACTTGAAGTTTTTTTTTTTGATGTTTTTTTTACTTGGAAAAACTTATTATTATTGAAAATAATTGGAAAATAAATCCTCAACAATGCATCATTTTTTAAAATATTGAATAGATTCATTACATATTTCTCGGATCATTTTTATTTGTTCAGTATTTCTAAAATAAAGCTTTTCACTTTTAGCATATCAAAAAATAAATTATTATCTATTAAGTATT</genome_strand>
        <mrna_strand>CTTTTCCGGCGAGTGAAATTGCGGTGGCTGAAGTCGCAGTACACGTGTTTGCTGAAAAAAATGAGAGAATATTATCAATCTGCTGTGAAGGATATAATGGAAAATGGCGGAGCATTGGATTCGTTTCAGCAGCGTTTACTATTGGAGACTTCTTTTGCTGTTCCGGTGATGGGCCTTTCCTTCAAAACTTTTCCAAATCATTATGGCCCTTGAAGTTTTTTTTTTTGATGTTTTTTTTACTTGGAAAAACTTATTATTATTGAAAATAATTGGAAAATAAATCCTCAACAATGCATCATTTTTTAAAATATTGAATAGATTCATTACATATTTCTCGGATCATTTTTATTTGTTCAGTATTTCTAAAATAAAGCTTTTCACTTTTAGCATATCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLe0093P23-Kdhrz/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U321332" ref_strand="+" ref_description="SGN-U321332        Tomato 200607 #1 [8 ESTs aligned] arabidopsis/peptide: | Symbol: None | ring-box protein-related, similar to ring-box protein 1 GI:4769004 from (Homo sapiens) | chr5:6956662-6958313 REVERSE | Aliases: F7C8.160, F7C8_160(evalue: 4e-53, score=204) genbank/nr: gi|31747517|gb|AAP57304.1| ring box protein [Populus tomentosa](evalue: 9e-52, score=206)">
      <seq>gaattttggattcgtattctgttgattgatttctcagctatgtctacagacgtcgagatggctgccgccgatgaaggatccaccgttaccgcacctccatgctgttcttcttcttcgaagaaacccaagcgttttgagatcaaaaagtggaacgctgtctctttatgggcttgggatattgttgtagacaactgtgctatttgcaggaaccatatcatggatctctgcattgaatgtcaagctaatcaagctagtgctactagcgaggagtgcactgttgcctggggtgtatgtaatcatgccttccactttcactgcatcagtcggtggctcaagacccgtcaagtgtgcccattagataacagtgagtgggagtttcagaagtatggtcactagaggatccaatacattcattgcagtggaaaagatcatgctgatgcactggaaccttgaaactcttattttagttttttttttgttttgtattatggcagtaaaaatctgagactgctttctattgggatgtgatttattagagtgttggcatttaaattgcagatatgatgttattttgaacttctatgttactgttttacttcaaatgtcaaactgtgttgctagttgattatgttgtttgttatccctatgttggtgacaaattctaatactagtataaagttatcttcgtataaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLe0093P23-Kdhrz/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06SLe0093P23.1" temp_strand="+" temp_description="C06SLe0093P23.1  AC216659.1 htgs_phase:1 submitted_to_sgn_as:C06SLe0093P23 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="60829" stop="64590"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="61129" g_stop="61303" g_length="175"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="175" r_length="175" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="61304" i_stop="61385" i_length="82">
            <donor d_prob="0.952" d_score="1.00"/>
            <acceptor a_prob="0.973" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="61386" g_stop="61436" g_length="51"/>
          <reference_exon_boundary r_type="cDNA" r_start="176" r_stop="226" r_length="51" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="61437" i_stop="61526" i_length="90">
            <donor d_prob="0.203" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="61527" g_stop="61586" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="227" r_stop="286" r_length="60" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="61587" i_stop="63792" i_length="2206">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="63793" g_stop="63864" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="287" r_stop="358" r_length="72" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="63865" i_stop="63948" i_length="84">
            <donor d_prob="0.954" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="63949" g_stop="64295" g_length="347"/>
          <reference_exon_boundary r_type="cDNA" r_start="359" r_stop="705" r_length="347" r_score="0.974"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLe0093P23.1" gen_strand="+" ref_id="SGN-U321332" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>705</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLe0093P23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U321332" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="61129" e_stop="61303"/>
          <exon e_start="61386" e_stop="61436"/>
          <exon e_start="61527" e_stop="61586"/>
          <exon e_start="63793" e_stop="63864"/>
          <exon e_start="63949" e_stop="64295"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAATTTTGGATTCGTATTCTGTTGATTGATTTCTCAGCTATGTCTACAGACGTCGAGATGGCTGCCGCCGATGAAGGATCCACCGTTACCGCACCTCCATGCTGTTCTTCTTCTTCGAAGAAACCCAAGCGTTTTGAGATCAAAAAGTGGAACGCTGTCTCTTTATGGGCTTGGGGTACGATTTTTGTATTGTTTCTTATCGATTGATGCTGTAAATTAGTGTTTAGCTAACGTGATTTGTGAAATTGTTGATGCAGATATTGTTGTAGACAACTGTGCTATTTGCAGGAACCATATCATGGATCTCTGTGAGTATCTTTGAAAATTATGGTTAGGTGAAACAAATTTGACCTTAATCATGTATTTATTTGTTTCGTTTGTGTGAAATTTTCTCTCAGGCATTGAATGTCAAGCTAATCAAGCTAGTGCTACTAGCGAGGAGTGCACTGTTGCCTGGGGTAAGCTATTTTTCGGAAGTGTTTATGTATCTCTATTATTTGGAAACTTGATACTTGGATTTAACGAGCCGAAATCATCTCAGTTAGAAGCTGTTATGTTGTTTTACACTTTGTGTTCATTGAATTGATTATTTGTGAGTTTATATATGCTGAGTTTTGATGTTCTGATTCCATACCAGTACTTTTTTGTGTATACATCACCTTGTGCCTTGTAAACAATATATTTTTATTCCATATTGGTAATCAAAGGCAAGGATGAACGTATGTCATGGTAAAAGATGCTTGTAGTATTTTTATGAATTTCTGTCTTGATGTTTGGTTTGTGCTTGTGTCAAGACACATATATTGTATGTCGTGTAATGAAATTTACTGGTCATTGTATTAAGCATATTTTTTCAATCATAAGTAATGTATCCATAGGTCCCCAGAGCCTTTTGTTGTCTTCCAAATTTCAATCTGTGATCAAAGTCATTTCGTGTGAGCATGTGACTTTTTGTCCTATAATATGACATATTTGTTTGATGTGAGAAGTTGTTTTGAGATGGTCGAGCATGTGAAGAGGAGGTGCGAGGATGTACTAGTTAGAAGGTGTGTGAGATTGGCTTTAGGAGAGTTAGATGTAGTCTGAAGAACTGTCTGGTCATTATAAGAGTTAAAGAAAGCCAAGGAGGAAAGGTCTGTGCATACTCCTATATATTACTTCTAGACTTTCCACCAAAAGACTGCACCTCTTCCCTCACTCGTTGCTTTCATTCCATGAGAATTTTGCACCTCACTCCATACACAGAATTTTCTTCCTCTTCTCTGTTCCTTCTTCTTTCTTTTACAGCATGAATGAAAGCACCAATGTGCTAAAAATCAAACCTCTAAATTTAATCATGCTGAAATAATTAATAAAGGTATCCAGAAGAGTGGAAAGCTTTTTTTTTTTGTTGTTGCTTCGGGAGGTGTATGTAGGTGTAGAGTTTTTTTGGCCAATGACGGAGGAGAAAAAGAATTGTGTATTGAGGGCTGTGTTGACTGTGCTAGGAATTGAGGGTGGGTTTTGTCCTAATTCAGGTGGCTTCCGATTAGCTTTTGCTGTAACATGCCTCTTTTCCTTTAGCGTCTGGCTCTTCTCTTTTCTACATTTTTCCTTTGGGGTTTATAAGTCAGTTACCTTCGTTCCCACATTAACATTTTTACCTTGAACTTACTATGGAGATTGGAGGGGGTCATGTGCAGCGAAAAGACTACCTAAATTTAGATGCATAGAGTTGCAATGATCATAAAACAGAATGGATGAAACTAGCACTGGATGTACTTTATGGGATGAAGTAAGCACAGTTGGGTTATTTTGCATATTCAGAGCATGCATTCATAATTTGCTTATCTAGACTTGCACTTTTTCTTAAATAATGCATGTAAAAATATAATGAAGAACAAGTCATTAATTTTTGCTAGTTCACTTGCCAGCAGTGGAACATCATGTCTGCCTAATGTGCGGGATAAATATGGGTGGTAGTCTTTTCAGCTTTATATGCATCTGCATTATCTATGAGTGCTTCATTACTTCTAATAGGCTGTAGTAGGATCACTTGATATTTTTTTTTTTTGAGAATGTTATGGATGAACCATCGAATAGTCCTGTCAACTAGTAGGTATTTAATTCTAATTCTGTATAAGAAGCTTTAGGCGGTGAAACCATCAGATCTTATGATACATCAAACAGCTTGTGACACATTAAGAACTATGAAGCGGTCTAGGGCTATGTAGATCTTTGACGTAAAAACGTCAATGGTTGCAGCCTATTTCATGTTTTAGCATTTAAGTCTGCAACTGAAATCCAAGTGAGGATTTTGTTCCATGAAAATAATTTTTTTTGTACTAGAGATCTTTCGCCTGGTTTCAGTTGCATGTTTATTATTACATGTGCTCGTCAAACTATGCTTATTGATTTGATAAACTTTGCTCTGGATAGTTTGGTATGTGAGCCCTCTTGTGTAGTAATACTAGCATGTCAATCTCTTATTTTATCTTAATAAGTAAGGAAATTAATCTAGTTTACTGCTGGTTTTCATCTGTTTCTCTCATTTATGTACCCTAGTTAGCTCTATGTGCATTTTGGAGTTATTTTATTACCTACTTTCTGTTATTTATACTGGTCCGCATATTTTTTCTTAATTATATTGGTATGCTTCAGAATTATTGATTGGGATTTCCTCAGGTGTATGTAATCATGCCTTCCACTTTCACTGCATCAGTCGGTGGCTCAAGACCCGTCAAGTGTGCCCATTAGGTACTTATCATTCATCAACTGTGTTTTAGTTTGTAGAGGGGCTGTGAGTATTTTGTAATTTTGGAATTATTCTTTTCTGTGCAGATAACAGTGAGTGGGAGTTTCAGAAGTATGGTCACTAGAGGATCCAATACATTCATTGCAGTGGAAAAGATCATGCTGATGCACTGGAACCTTGAAACTCTTATTTTAGTTTTTTTTTTGTTTTGTATTATGGCAGTAAAAATCTGAGACTGCTTTCTATTGGGATGTGATTTATTAGAGTGTTGGCATTTAAATTGCAGATATGATGTTATTTTGAACTTCTATGTTACTGTTTTACTTCAAATGTCAAACTGTGTTGCTAGTTGATTATGTTGTTTGTTAACCCTATGTTGGTGACAAATTCTAATACTAGTATAAAGTTATCTTCGTATATATAGAAAAGCTGT</genome_strand>
        <mrna_strand>GAATTTTGGATTCGTATTCTGTTGATTGATTTCTCAGCTATGTCTACAGACGTCGAGATGGCTGCCGCCGATGAAGGATCCACCGTTACCGCACCTCCATGCTGTTCTTCTTCTTCGAAGAAACCCAAGCGTTTTGAGATCAAAAAGTGGAACGCTGTCTCTTTATGGGCTTGGG..................................................................................ATATTGTTGTAGACAACTGTGCTATTTGCAGGAACCATATCATGGATCTCT..........................................................................................GCATTGAATGTCAAGCTAATCAAGCTAGTGCTACTAGCGAGGAGTGCACTGTTGCCTGGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTATGTAATCATGCCTTCCACTTTCACTGCATCAGTCGGTGGCTCAAGACCCGTCAAGTGTGCCCATTAG....................................................................................ATAACAGTGAGTGGGAGTTTCAGAAGTATGGTCACTAGAGGATCCAATACATTCATTGCAGTGGAAAAGATCATGCTGATGCACTGGAACCTTGAAACTCTTATTTTAGTTTTTTTTTTGTTTTGTATTATGGCAGTAAAAATCTGAGACTGCTTTCTATTGGGATGTGATTTATTAGAGTGTTGGCATTTAAATTGCAGATATGATGTTATTTTGAACTTCTATGTTACTGTTTTACTTCAAATGTCAAACTGTGTTGCTAGTTGATTATGTTGTTTGTTATCCCTATGTTGGTGACAAATTCTAATACTAGTATAAAGTTATCTTCGTATAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLe0093P23-Kdhrz/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U337357" ref_strand="-" ref_description="SGN-U337357        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: | Symbol: None | ring-box protein-related, similar to ring-box protein 1 GI:4769004 from (Homo sapiens) | chr5:6956662-6958313 REVERSE | Aliases: F7C8.160, F7C8_160(evalue: 0.0001, score=44.3) genbank/nr: hypothetical(evalue: 3e-63, score=245)">
      <seq>gtcaagtgtgcccattagataacagtgagtgggagtttcagaagtatggtcactagaggattcaatacattcattgcagcagaaaagatcacgcttcactggaaccttgaaactcttattttagtgttttttttgtttggtattatggcaatataaatctgagactgctttctattaaaaggtgatttattagagagttggcatttaaattcaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLe0093P23-Kdhrz/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06SLe0093P23.1" temp_strand="+" temp_description="C06SLe0093P23.1  AC216659.1 htgs_phase:1 submitted_to_sgn_as:C06SLe0093P23 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="63547" stop="64409"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="63847" g_stop="63864" g_length="18"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="18" r_length="18" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="63865" i_stop="63948" i_length="84">
            <donor d_prob="0.954" d_score="0.00"/>
            <acceptor a_prob="0.997" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63949" g_stop="64144" g_length="196"/>
          <reference_exon_boundary r_type="cDNA" r_start="19" r_stop="211" r_length="193" r_score="0.918"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="213" polyA_stop="228"/>
      <MATCH_line gen_id="C06SLe0093P23.1" gen_strand="+" ref_id="SGN-U337357" ref_strand="-">
        <total_alignment_score>0.918</total_alignment_score>
        <cumulative_length_of_scored_exons>214</cumulative_length_of_scored_exons>
        <coverage percentage="0.939" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLe0093P23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U337357" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="63847" e_stop="63864"/>
          <exon e_start="63949" e_stop="64144"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCAAGTGTGCCCATTAGGTACTTATCATTCATCAACTGTGTTTTAGTTTGTAGAGGGGCTGTGAGTATTTTGTAATTTTGGAATTATTCTTTTCTGTGCAGATAACAGTGAGTGGGAGTTTCAGAAGTATGGTCACTAGAGGATCCAATACATTCATTGCAGTGGAAAAGATCATGCTGATGCACTGGAACCTTGAAACTCTTATTTTAGTTTTTTTTTTGTTTTGTATTATGGCAGTAAAAATCTGAGACTGCTTTCTATTGGGATGTGATTTATTAGAGTGTTGGCATTTAAATT</genome_strand>
        <mrna_strand>GTCAAGTGTGCCCATTAG....................................................................................ATAACAGTGAGTGGGAGTTTCAGAAGTATGGTCACTAGAGGATTCAATACATTCATTGCAGCAGAAAAGATCACGCT--T-CACTGGAACCTTGAAACTCTTATTTTAGTGTTTTTTTTGTTTGGTATTATGGCAATATAAATCTGAGACTGCTTTCTATTAAAAGGTGATTTATTAGAGAGTTGGCATTTAAATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLe0093P23-Kdhrz/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U318298" ref_strand="-" ref_description="SGN-U318298        Tomato 200607 #1 [17 ESTs aligned] arabidopsis/peptide: | Symbol: None | subtilase family protein, contains similarity to cucumisin-like serine protease GI:3176874 from (Arabidopsis thaliana) | chr3:4658428-4660761 REVERSE | Aliases: MAG2.15(evalue: 0, score=1004) genbank/nr: gi|45773916|gb|AAS76762.1| At3g14067 [Arabidopsis thaliana] >gi|44917461|gb|AAS49055.1| At3g14067 [Arabidopsis thaliana] >gi|22331076|ref|NP_566473.2| subtilase family protein [Arabidopsis thaliana] (evalue: 0, score=1004)">
      <seq>ttttttttttttttagttaagatacccaaaactttatttatgagttctacctttaactttttaaattcgaactatgtcatataaattagctatcgagaaattatgaataagcacctagcccatattttgttcttaggggcatttgttaatccattataaaaatatctaggtgggtatgctaaattaatggaaagtaaatcaatcagcaccttcaacgtggcccaataaggcccaaccaattggctacttccgcttctctttatatctcatataccggcggcatttcgccgataacttttttcctccggtaaacggtcaacgatggcggaaatctccgttctttctattttattcatcctctctttctgccttgctccggtgaccatttccgtccaatcggatgaccatgaaactttcatcattcacgtagccaaatcccacaagcctcatgttttttccacccatcaccattggtattcctccatcgtccgatctgtttctccgtcctctcaccacccttctaaaatcctctatacctatgaacgagccgccgtgggtttctccgcccgtctgaccgctgggcaggctgatcagctccgccgtgttcctggggtaatctctgtcattcctgaccaagtacggtatccccacaccacccatacacctaccttcttaaaacttgccgactcattcggcctctggcctgactctgactacgccgatgatgttattgttggtgttctggatacgggtatttggccggaaagaccgagtttttccgatgagggattatctcctgttcctgcaggttggaaagggaagtgtgtgactggaccgggttttcccagaagttcatgtaatcggaaaattattggtgctcggatgttttacaaagggtatgaagcttcacagggtccaatggacgaatcaaaagaagcgaaatcaccgagagatactgaaggtcatggaacacatactgcttcaactgcagctggttctttggtagcaaatgctagtttttaccaatatgctaaaggtgaagctagaggaatggcgattaaagctagaatagctgcttacaagatttgttggaaaaccggttgttttgattccgatatactggctgccatggatcaagctgttgatgatggtgtccatgtgatttcactttccgtcggagctaacggatatgctccacattacctccatgactccattgcaatcggagcttttggtgcctccgaacatggggtcctcgtctcatgctcagctggaaattccggtcctggcccttacacagctgtgaacattgccccgtggatcctcaccgttggtgcgtcaaccatagaccgagagtttccagctgatgttattctaggagatgatagagtatttggtggcgtttccttatacgccggcaatccgttaaacgattccaaattacccgtggtttattccggtgattgtggtagcaaatactgttatccaggaaagctggaccataaaaaagtcgccggtaaaattgtcctctgcgacaggggaggcaacgctagagttgaaaaaggaagtgcagtgaagctagctggtggggtaggaatgatactcgctaacttagctgattccggtgaagaactcgttgcagattcacatcttctcccggcgacaatggtaggtcaaaaagccggagacgaaataagagaatacgtcatctctgatccatcaccaacggctacaatcgtattcaaaggaaccgtgatcggaaattcaccagcggcgccgcgtgtggcggcgttctcaagccgtggaccgaatcatttaacgccggagattcttaaaccggatgttactgcacccggagttaacattttagccggttggaccggagctaacggtccaaccgatttagaaattgacccgagaagagtggaatttaatattatttcagggacttccatgtcgtgtcctcacgttagtggattagctgctttacttagaagggcccactcaaagtggaccccagcagccatcaaatcagcactcatgacaacagcttataatttggacaattcaggtaagatatttactgatcttgccactggtgaagaatccacaccttttgttcatggatccgggcatgtggatccgaaccgagcattgaatccgggtttggtgtacgatattgaaaccagtgactacgtgaacttcctatgcactattggctatgatggcgacgatatcgcggtgttcgtgagggattcttctcgggtgaattgtagtgaacggagtttggctactccgggagacctgaattacccgtcatttgcagttgattttaccagtgatagtaacggtgtggtgaaatacaagcgtgtggtgaagaacgtaggggggaatccaaatgctgtttatgaagtgaaggtgaacgcacctttaggtgtggaagtgagtgtgtcaccggcgaagcttgttttcagtgaggaaaataatagtttgtcctatgagattagctttacgagtaaaagaagtgaagataatattatggtgaaggggactccatctgcgtttggatcgattgaatggagtgatgggattcacagtgtgagaagtccaatcgcagtgcgttggcgataccaatctgctgtgtccatgtgagtagttggatcgttgtgactgagggaagacaaataaattggactgatggcaaactggaagaggaaaataccattgaagtttcatttggtttcactttctttaaactttatttttttttcttgtttttcagattgatgtatatatgaatgaagcatgtcgaattgttccagagttccaagcctagattttgacttcattaagtccattaccaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLe0093P23-Kdhrz/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06SLe0093P23.1" temp_strand="-" temp_description="C06SLe0093P23.1  AC216659.1 htgs_phase:1 submitted_to_sgn_as:C06SLe0093P23 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="67727" stop="37870"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="67424" g_stop="64572" g_length="2853"/>
          <reference_exon_boundary r_type="cDNA" r_start="17" r_stop="2869" r_length="2853" r_score="0.998"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64571" i_stop="64078" i_length="494">
            <donor d_prob="0.000" d_score="0.88"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="64077" g_stop="64047" g_length="31"/>
          <reference_exon_boundary r_type="cDNA" r_start="2870" r_stop="2900" r_length="31" r_score="0.774"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="14" polyA_stop="1"/>
      <MATCH_line gen_id="C06SLe0093P23.1" gen_strand="-" ref_id="SGN-U318298" ref_strand="-">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>2884</cumulative_length_of_scored_exons>
        <coverage percentage="0.994" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLe0093P23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U318298" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="67424" e_stop="64572"/>
          <exon e_start="64077" e_stop="64047"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTAAGATACCCAAAACTTTATTTATGAGTTCTACCTTTAACTTTTTAAATTCGAACTATGTCATATAAATTAGCTATCGAGAAATTATGAATAAGCACCTAGCCCATATTTTGTTCTTAGGGGCATTTGTTAATCCATTATAAAAATATCTAGGTGGGTATGCTAAATTAATGGAAAGTAAATCAATCAGCACCTTCAACGTGGCCCAATAAGGCCCAACCAATTGGCTACTTCCGCTTCTCTTTATATCTCATATACCGGCGGCATTTCGCCGATAACTTTTTTCCTCCGGTAAACGGTCAACGATGGCGGAAATCTCCGTTCTTTCTATTTTATTCATCCTCTCTTTCTGCCTTGCTCCGGTGACCATTTCCGTCCAATCGGATGACCATGAAACTTTCATCATTCACGTAGCCAAATCCCACAAGCCTCATGTTTTTTCCACCCATCACCATTGGTATTCCTCCATCGTCCGATCTGTTTCTCCGTCCTCTCACCACCCTTCTAAAATCCTCTATACCTATGAACGAGCCGCCGTGGGTTTCTCCGCCCGTCTGACCGCTGGGCAGGCTGATCAGCTCCGCCGTGTTCCTGGGGTAATCTCTGTCATTCCTGACCAAGTACGGTATCCCCACACCACCCATACACCTACCTTCTTAAAACTTGCCGACTCATTCGGCCTCTGGCCTGACTCTGACTACGCCGATGATGTTATTGTTGGTGTTCTGGATACGGGTATTTGGCCGGAAAGACCGAGTTTTTCCGATGAGGGATTATCTCCTGTTCCTGCAGGTTGGAAAGGGAAGTGTGTGACTGGACCGGGTTTTCCCAGAAGTTCATGTAATCGGAAAATTATTGGTGCTCGGATGTTTTACAAAGGGTATGAAGCTTCACAGGGTCCAATGGACGAATCAAAAGAAGCGAAATCACCGAGAGATACTGAAGGTCATGGAACACATACTGCTTCAACTGCAGCTGGTTCTTTGGTAGCAAATGCTAGTTTTTACCAATATGCTAAAGGTGAAGCTAGAGGAATGGCGATTAAAGCTAGAATAGCTGCTTACAAGATTTGTTGGAAAACCGGTTGTTTTGATTCCGATATACTGGCTGCCATGGATCAAGCTGTTGATGATGGTGTCCATGTGATTTCACTTTCCGTCGGAGCTAACGGATATGCTCCACATTACCTCCATGACTCCATTGCAATCGGAGCTTTTGGTGCCTCCGAACATGGGGTCCTCGTCTCATGCTCAGCTGGAAATTCCGGTCCTGGCCCTTACACAGCTGTGAACATTGCCCCGTGGATCCTCACCGTTGGTGCGTCAACCATAGACCGAGAGTTTCCAGCTGATGTTATTCTAGGAGATGATAGAGTATTTGGTGGCGTTTCCTTATACGCCGGCAATCCGTTAAACGATTCCAAATTACCCGTGGTTTATTCCGGTGATTGTGGTAGCAAATACTGTTATCCAGGAAAGCTGGACCATAAAAAAGTCGCCGGTAAAATTGTCCTCTGCGACAGGGGAGGCAACGCTAGAGTTGAAAAAGGAAGTGCAGTGAAGCTAGCTGGTGGGGTAGGAATGATACTCGCTAACTTAGCTGATTCCGGTGAAGAACTCGTTGCAGATTCACATCTTCTCCCGGCGACAATGGTAGGTCAAAAAGCCGGAGACGAAATAAGAGAATACGTCATCTCTGATCCATCACCAACGGCTACAATCGTATTCAAAGGAACCGTGATCGGAAATTCACCAGCGGCGCCGCGTGTGGCGGCGTTCTCAAGCCGTGGACCGAATCATTTAACGCCGGAGATTCTTAAACCGGATGTTACTGCACCCGGAGTTAACATTTTAGCCGGTTGGACCGGAGCTAACGGTCCAACCGATTTAGAAATTGACCCGAGAAGAGTGGAATTTAATATTATTTCAGGGACTTCCATGTCGTGTCCTCACGTTAGTGGATTAGCTGCTTTACTTAGAAGGGCCCACTCAAAGTGGACCCCAGCAGCCATCAAATCAGCACTCATGACAACAGCTTATAATTTGGACAATTCAGGTAAGATATTTACTGATCTTGCCACTGGTGAAGAATCCACACCTTTTGTTCATGGATCCGGGCATGTGGATCCGAACCGAGCATTGAATCCGGGTTTGGTGTACGATATTGAAACCAGTGACTACGTGAACTTCCTATGCACTATTGGCTATGATGGCGACGATATCGCGGTGTTCGTGAGGGATTCTTCTCGGGTGAATTGTAGTGAACGGAGTTTGGCTACTCCGGGAGACCTGAATTACCCGTCATTTGCAGTTGATTTTACCAGTGATAGTAACGGTGTGGTGAAATACAAGCGTGTGGTGAAGAACGTAGGGGGGAATCCAAATGCTGTTTATGAAGTGAAGGTGAACGCACCTTTAGGTGTGGAAGTGAGTGTGTCACCGGCGAAGCTTGTTTTCAGTGAGGAAAATAATAGTTTGTCCTATGAGATTAGCTTTACGAGTAAAAGAAGTGAAGATAATATTATGGTGAAGGGGACTCCATCTGCGTTTGGATCGATTGAATGGAGTGATGGGATTCACAGTGTGAGAAGTCCAATCGCAGTGCGTTGGCGATACCAATCTGCTGTGTCCATGTGAGTAGTTGGATCGTTGTGACTGAGGGAAGACAAATAAATTGGACTGATGGCAAACTGGAAGAGGAAAATACCATTGAAGTTTCATTTGGTTTCACTTTCTTTAAACTTTATTTTTTTTTCTTGTTTTTCAGATTGATGTATATATGAATGAAGCATGTCGAATTGTTCCAGAGTTCCAAGCCTAGATCTTGACTTCATTAAGTACATTAACAAATTATGTAGTCTTAAAACCAGTGATTAAACAGTCTCTATATATAACTTGACACGATGTAAAGCTGGGTAAAATAGCAATTGGCCTTTTTGTTTTATATGAAAGGATTGAATGACATAATCGAATGGAATCCAAATTTGGTTAACATAAAGATGACTTCAACCTTCTCTCAACAGGCCAGGATCAATAGCCTTTCAACCTGAGGAAATTTTTGGCACTCATCCTTTGCCTGGGGAATAAATTTTAGCAGTTAAACAACAGATCAATCTTGGCACCAGACGGTACAGCTTTTCTATATATACGAAGATAACTTTATACTAGTATTAGAATTTGTCACCAACATAGGGTTAACAAACAACATAATCAACTAGCAACACAGTTTGACATTTGAAGTAAAACAGTAACATAGAAGTTCAAAATAACATCATATCTGCAATTTAAATGCCAACACTCTAATAAATCACATCCCAATAGAAAGCAGTCTCAGATTTTTACTGCCATAATACAAAACAAAAAAAAAACTAAAATAAGA</genome_strand>
        <mrna_strand>TTAAGATACCCAAAACTTTATTTATGAGTTCTACCTTTAACTTTTTAAATTCGAACTATGTCATATAAATTAGCTATCGAGAAATTATGAATAAGCACCTAGCCCATATTTTGTTCTTAGGGGCATTTGTTAATCCATTATAAAAATATCTAGGTGGGTATGCTAAATTAATGGAAAGTAAATCAATCAGCACCTTCAACGTGGCCCAATAAGGCCCAACCAATTGGCTACTTCCGCTTCTCTTTATATCTCATATACCGGCGGCATTTCGCCGATAACTTTTTTCCTCCGGTAAACGGTCAACGATGGCGGAAATCTCCGTTCTTTCTATTTTATTCATCCTCTCTTTCTGCCTTGCTCCGGTGACCATTTCCGTCCAATCGGATGACCATGAAACTTTCATCATTCACGTAGCCAAATCCCACAAGCCTCATGTTTTTTCCACCCATCACCATTGGTATTCCTCCATCGTCCGATCTGTTTCTCCGTCCTCTCACCACCCTTCTAAAATCCTCTATACCTATGAACGAGCCGCCGTGGGTTTCTCCGCCCGTCTGACCGCTGGGCAGGCTGATCAGCTCCGCCGTGTTCCTGGGGTAATCTCTGTCATTCCTGACCAAGTACGGTATCCCCACACCACCCATACACCTACCTTCTTAAAACTTGCCGACTCATTCGGCCTCTGGCCTGACTCTGACTACGCCGATGATGTTATTGTTGGTGTTCTGGATACGGGTATTTGGCCGGAAAGACCGAGTTTTTCCGATGAGGGATTATCTCCTGTTCCTGCAGGTTGGAAAGGGAAGTGTGTGACTGGACCGGGTTTTCCCAGAAGTTCATGTAATCGGAAAATTATTGGTGCTCGGATGTTTTACAAAGGGTATGAAGCTTCACAGGGTCCAATGGACGAATCAAAAGAAGCGAAATCACCGAGAGATACTGAAGGTCATGGAACACATACTGCTTCAACTGCAGCTGGTTCTTTGGTAGCAAATGCTAGTTTTTACCAATATGCTAAAGGTGAAGCTAGAGGAATGGCGATTAAAGCTAGAATAGCTGCTTACAAGATTTGTTGGAAAACCGGTTGTTTTGATTCCGATATACTGGCTGCCATGGATCAAGCTGTTGATGATGGTGTCCATGTGATTTCACTTTCCGTCGGAGCTAACGGATATGCTCCACATTACCTCCATGACTCCATTGCAATCGGAGCTTTTGGTGCCTCCGAACATGGGGTCCTCGTCTCATGCTCAGCTGGAAATTCCGGTCCTGGCCCTTACACAGCTGTGAACATTGCCCCGTGGATCCTCACCGTTGGTGCGTCAACCATAGACCGAGAGTTTCCAGCTGATGTTATTCTAGGAGATGATAGAGTATTTGGTGGCGTTTCCTTATACGCCGGCAATCCGTTAAACGATTCCAAATTACCCGTGGTTTATTCCGGTGATTGTGGTAGCAAATACTGTTATCCAGGAAAGCTGGACCATAAAAAAGTCGCCGGTAAAATTGTCCTCTGCGACAGGGGAGGCAACGCTAGAGTTGAAAAAGGAAGTGCAGTGAAGCTAGCTGGTGGGGTAGGAATGATACTCGCTAACTTAGCTGATTCCGGTGAAGAACTCGTTGCAGATTCACATCTTCTCCCGGCGACAATGGTAGGTCAAAAAGCCGGAGACGAAATAAGAGAATACGTCATCTCTGATCCATCACCAACGGCTACAATCGTATTCAAAGGAACCGTGATCGGAAATTCACCAGCGGCGCCGCGTGTGGCGGCGTTCTCAAGCCGTGGACCGAATCATTTAACGCCGGAGATTCTTAAACCGGATGTTACTGCACCCGGAGTTAACATTTTAGCCGGTTGGACCGGAGCTAACGGTCCAACCGATTTAGAAATTGACCCGAGAAGAGTGGAATTTAATATTATTTCAGGGACTTCCATGTCGTGTCCTCACGTTAGTGGATTAGCTGCTTTACTTAGAAGGGCCCACTCAAAGTGGACCCCAGCAGCCATCAAATCAGCACTCATGACAACAGCTTATAATTTGGACAATTCAGGTAAGATATTTACTGATCTTGCCACTGGTGAAGAATCCACACCTTTTGTTCATGGATCCGGGCATGTGGATCCGAACCGAGCATTGAATCCGGGTTTGGTGTACGATATTGAAACCAGTGACTACGTGAACTTCCTATGCACTATTGGCTATGATGGCGACGATATCGCGGTGTTCGTGAGGGATTCTTCTCGGGTGAATTGTAGTGAACGGAGTTTGGCTACTCCGGGAGACCTGAATTACCCGTCATTTGCAGTTGATTTTACCAGTGATAGTAACGGTGTGGTGAAATACAAGCGTGTGGTGAAGAACGTAGGGGGGAATCCAAATGCTGTTTATGAAGTGAAGGTGAACGCACCTTTAGGTGTGGAAGTGAGTGTGTCACCGGCGAAGCTTGTTTTCAGTGAGGAAAATAATAGTTTGTCCTATGAGATTAGCTTTACGAGTAAAAGAAGTGAAGATAATATTATGGTGAAGGGGACTCCATCTGCGTTTGGATCGATTGAATGGAGTGATGGGATTCACAGTGTGAGAAGTCCAATCGCAGTGCGTTGGCGATACCAATCTGCTGTGTCCATGTGAGTAGTTGGATCGTTGTGACTGAGGGAAGACAAATAAATTGGACTGATGGCAAACTGGAAGAGGAAAATACCATTGAAGTTTCATTTGGTTTCACTTTCTTTAAACTTTATTTTTTTTTCTTGTTTTTCAGATTGATGTATATATGAATGAAGCATGTCGAATTGTTCCAGAGTTCCAAGCCTAGATTTTGACTTCATTAAGTCCATTACCAAAAAAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLe0093P23-Kdhrz/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U326178" ref_strand="+" ref_description="SGN-U326178        Tomato 200607 #1 [4 ESTs aligned] arabidopsis/peptide: AT1G72510.2 | Symbol: None | expressed protein | chr1:27307075-27308512 FORWARD | Aliases: None (evalue: 2e-28, score=123) genbank/nr: gi|51536554|gb|AAU05515.1| At1g72510 [Arabidopsis thaliana] >gi|48958479|gb|AAT47792.1| At1g72510 [Arabidopsis thaliana] >gi|12325270|gb|AAG52577.1| unknown protein; 9323-8826 [Arabidopsis thaliana] >gi|42572081|ref|NP_974131.1| expressed protein [Arabidopsis thaliana] >gi|15218503|ref|NP_177395.1| expressed protein [Arabidopsis thaliana] (evalue: 1e-26, score=123)">
      <seq>ggagcacacaaattaaataaaactatcatttttgtctctatctatctcgtttgatatcaatctatgtattaaattcattgataaactctgtttttcttgtttctattgagatttgagatagaggaagtgttgaaattttcgtaatttttttctttatggatacgtatattgttcatgaggtaaaaagcgagtgggagaaggattcgttataagttgagtaaacatcaaatctgataagaagaagaaaaagcaataattataatttttgcgaacttcgctgcataaatttacatcttcatttccgtatttgcttgattgacgaataacgatgtcgataatcagtgaaacagttatgatgaaagcggcagaagcacaaacagttaaagcaaaacttacagcgccgatggaggttgatttcgccaaatgcgagtgctgcggattgacggaggaatgtactctgtcgtatatagaaacaatccggcagcggtaccaagggaattggatttgtggattgtgtgcggaggctatcaaggacgaggtgattcgatgtgagaggttgattactgcggaagaggcattgaatcgtcatctcaatttctgtaagaacttcagttcgtctcgtccgccattgaatccgactgttcatttaatcgatgcgatgaggcagattttgaggcggagttttgaatctccgaaattgattcggtcgatgtctagtagtccggtggagagtagcggagagatgaagcacacggtgattgttcgatcggaaagttgtattcctgcaatttctctagtggattcgagttcgtttcatgctatgggattcgatggaagttgtgaatgaaacagaacagagcaaattgggagtttttgttttatggaatggaatagtacttgctctaaaaggatttaaactgttggtcatgctttttcaatggttatatttactactttttccaacaggtttttgcagttttgattagttttccttatgtatcatgtaaatatttatttatgcgaaaccatcttttagctaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLe0093P23-Kdhrz/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06SLe0093P23.1" temp_strand="-" temp_description="C06SLe0093P23.1  AC216659.1 htgs_phase:1 submitted_to_sgn_as:C06SLe0093P23 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="73439" stop="37873"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="73139" g_stop="72826" g_length="314"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="314" r_length="314" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="72825" i_stop="72716" i_length="110">
            <donor d_prob="0.809" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="72715" g_stop="71990" g_length="726"/>
          <reference_exon_boundary r_type="cDNA" r_start="315" r_stop="1040" r_length="726" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="71989" i_stop="70784" i_length="1206">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="70783" g_stop="70751" g_length="33"/>
          <reference_exon_boundary r_type="cDNA" r_start="1041" r_stop="1073" r_length="33" r_score="0.667"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLe0093P23.1" gen_strand="-" ref_id="SGN-U326178" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>1073</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLe0093P23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U326178" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="73139" e_stop="72826"/>
          <exon e_start="72715" e_stop="71990"/>
          <exon e_start="70783" e_stop="70751"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAGCACACAAATTAAATAAAACTATCATTTTTGTCTCTATCTATCTCGTTTGATATCAATCTATGTATTAAATTCATTGATAAACTCTGTTTTTCTTGTTTCTATTGAGATTTGAGATAGAGGAAGTGTTGAAATTTTCGTAATTTTTTTCTTTATGGATACGTATATTGTTCATGAGGTAAAAAGCGAGTGGGAGAAGGATTCGTTATAAGTTGAGTAAACATCAAATCTGATAAGAAGAAGAAAAAGCAATAATTATAATTTTTGCGAACTTCGCTGCATAAATTTACATCTTCATTTCCGTATTTGCTTGGTAAGTGTATTGATTTTGGATGTTAGGTTAATTATGAACTGTTTTGAGTTCGGATTTTGTATGTTTATGTTGAATTAATTTTTTGATTTCACGTTGAAATTCGTTTTCAGATTGACGAATAACGATGTCGATAATCAGTGAAACAGTTATGATGAAAGCGGCAGAAGCACAAACAGTTAAAGCAAAACTTACAGCGCCGATGGAGGTTGATTTCGCCAAATGCGAGTGCTGCGGATTGACGGAGGAATGTACTCTGTCGTATATAGAAACAATCCGGCAGCGGTACCAAGGGAATTGGATTTGTGGATTGTGTGCGGAGGCTATCAAGGACGAGGTGATTCGATGTGAGAGGTTGATTACTGCGGAAGAGGCATTGAATCGTCATCTCAATTTCTGTAAGAACTTCAGTTCGTCTCGTCCGCCATTGAATCCGACTGTTCATTTAATCGATGCGATGAGGCAGATTTTGAGGCGGAGTTTTGAATCTCCGAAATTGATTCGGTCGATGTCTAGTAGTCCGGTGGAGAGTAGCGGAGAGATGAAGCACACGGTGATTGTTCGATCGGAAAGTTGTATTCCTGCAATTTCTCTAGTGGATTCGAGTTCGTTTCATGCTATGGGATTCGATGGAAGTTGTGAATGAAACAGAACAGAGCAAATTGGGAGTTTTTGTTTTATGGAATGGAATAGTACTTGCTCTAAAAGGATTTAAACTGTTGGTCATGCTTTTTCAATGGTTATATTTACTACTTTTTCCAACAGGTTTTTGCAGTTTTGATTAGTTTTCCTTATGTATCATGTAAATATTTATTTATGCGAAACCATCTTTTAGCTAAGCTATAATCTTGAAATTTGGGTGGTTCTAATGTATAAACGAGTTGTGCCGATGCAACAATGAAGAGGCGTGACTCGTGAGAGATCGACATGACAAAACGTTCTTGATAAGACCTTGATAGAAAGGTTTGAAGGTCGAGGATTATGATAAATTGTTAAGCAGGTAGGCCCATGTTGTAACACCTTTTTGTAGGAGAGACGGAGCTTGTCCTCTCTTCTTCTTTTCTCTTTATTAATGTTTAGTACTTGCATAGTATCTTGTAGTTCGTGTTCTATTGTTAGCTATTGCTTTGGGTTAAGATTTACATATAGTTTGTTCTCTCCTAACACGAGATATATTGTTGTAAAAATCTTGGTTCTATTACAACATGTTTGTGCTGTTCCTACTAGTTTGGTTTTCATTGGACCAAACTTCAATTGTAATTCAACCAACTCAATCATGTCTCAAAGAGTAGTTATCAATTCTTCGAAATCACTTGAATTAGTACTTCACATTAGCTCAATCTCATCGTATTGTTGCTTGGTAAGAATGACCATGATCGATGAGCTCCTGATCGAAAAGCACAAATATTCCCTCAAAATCATACAAATCAGTTATAGAAATCTGAATTCTTTCTCCCCTCAAAACTGTTCTCTGCATTTGTTATTATTACAATAACATTATATAGTTGAGTCCTGTTAGTTGCCCTGCATTTTGAGTTCGTTGAAAGTTCTGTAAATTGAATGTGGGCGGCACTGCCTCATTAAAGATGTTTAAACTTATATTGATGACATCTTAAGCCACTAGGCTATAACAACCTATTATGTCAAGAGTGTTCAAAATATATAATTGAATAACTTCATTTACCATTTTACTTATATATGCAATTTTTTTTCAAACGATCGGTGTCCAATTAAATACCTGGAGTACATTTACCTACGTCACTGCTAGGATGACAATGGGGCAGGGTAGAAGTGGTTTCTAAAGATTATTTATATTTAAACTTAATTTTTTTAACTTTTTAGAATATTATTCAGGAAAATCCTATTATTCATTAAGAGAATTTCTTTAAAGTTACTCAAATATATAAGATAGTAAATGAAAATAATTCATTAAAAACTATTTATCTTTTCTTACATGCCTTTCAATTGACGTTTAAAAAAAATTAAGTTATTATCTATTAAATTAATTTAAATTAAATCCAAAAAGAAATTTTATTTTTAGTGTCAAATTTAATTAAGAAAAGACAAATAATTAAAAA</genome_strand>
        <mrna_strand>GGAGCACACAAATTAAATAAAACTATCATTTTTGTCTCTATCTATCTCGTTTGATATCAATCTATGTATTAAATTCATTGATAAACTCTGTTTTTCTTGTTTCTATTGAGATTTGAGATAGAGGAAGTGTTGAAATTTTCGTAATTTTTTTCTTTATGGATACGTATATTGTTCATGAGGTAAAAAGCGAGTGGGAGAAGGATTCGTTATAAGTTGAGTAAACATCAAATCTGATAAGAAGAAGAAAAAGCAATAATTATAATTTTTGCGAACTTCGCTGCATAAATTTACATCTTCATTTCCGTATTTGCTTG..............................................................................................................ATTGACGAATAACGATGTCGATAATCAGTGAAACAGTTATGATGAAAGCGGCAGAAGCACAAACAGTTAAAGCAAAACTTACAGCGCCGATGGAGGTTGATTTCGCCAAATGCGAGTGCTGCGGATTGACGGAGGAATGTACTCTGTCGTATATAGAAACAATCCGGCAGCGGTACCAAGGGAATTGGATTTGTGGATTGTGTGCGGAGGCTATCAAGGACGAGGTGATTCGATGTGAGAGGTTGATTACTGCGGAAGAGGCATTGAATCGTCATCTCAATTTCTGTAAGAACTTCAGTTCGTCTCGTCCGCCATTGAATCCGACTGTTCATTTAATCGATGCGATGAGGCAGATTTTGAGGCGGAGTTTTGAATCTCCGAAATTGATTCGGTCGATGTCTAGTAGTCCGGTGGAGAGTAGCGGAGAGATGAAGCACACGGTGATTGTTCGATCGGAAAGTTGTATTCCTGCAATTTCTCTAGTGGATTCGAGTTCGTTTCATGCTATGGGATTCGATGGAAGTTGTGAATGAAACAGAACAGAGCAAATTGGGAGTTTTTGTTTTATGGAATGGAATAGTACTTGCTCTAAAAGGATTTAAACTGTTGGTCATGCTTTTTCAATGGTTATATTTACTACTTTTTCCAACAGGTTTTTGCAGTTTTGATTAGTTTTCCTTATGTATCATGTAAATATTTATTTATGCGAAACCATCTTTTAGCTAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>13</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="-" PGL_start="5965" PGL_stop="3303"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="5965" e_stop="5900"/>
            <exon e_start="4171" e_stop="3994"/>
            <exon e_start="3887" e_stop="3303"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.947" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.997" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="5965" e_stop="5900" e_length="66"/>
          </exon>
          <intron i_serial="1" don_prob="0.947" acc_prob="0.992">
            <gDNA_intron_boundary i_start="5899" i_stop="4172" i_length="1728"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="4171" e_stop="3994" e_length="178"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.997">
            <gDNA_intron_boundary i_start="3993" i_stop="3888" i_length="106"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="3887" e_stop="3303" e_length="585"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="5965" stop="5900"/>
              <exon start="4171" stop="3994"/>
              <exon start="3887" stop="3303"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U337451" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GGTACCTGATGATGATGCTCCTGAATGTCCTGATCTGGACAATATATTTGATGACCATTGGAATAG : GGGCTGGGATCAGTTTCAAGCCAATGAAACACTGTTTGGAGTAAAAAGCACATTTGATGAGGACCTTTATACGACAAAGCTTGAGAGAGGTCCTCAGATGAGTGAGTTGGAAAAAGAAGCTCTAAGAATAGCTAGAGAAATTGAAGGTGAGGATACACGTGATCTTCATCTAGCAGAG : GAGAGAGGGATCCAACTTCATGAGAACCTAGAAGTGGACGAGGAAACCAGATTTTCCGCAGTTGTTAGAGAGATTGATGATAGCGGCTATGACAACTGTGAGGACATCCTGTTGGATTCACGTAATGATGAGACATTTCAAGGTATATCTAGTGCTATGGGGAAGTCATTTACTGACATGGGCAGAAGGAAAATGAATGATGGTGCACAAGTTTCATTAAGATCTTCCTTCATGGTATAATTTTGTTTACCCACATTCATTAGTCTTTAAGAATTGTTTGTTGCGGTACTGAGGCTTTTTCCTTCTGTTAAGATAGGGATGACAGAGGAAGATATTGTCATATTAGTCAAGTATCTCAAGCTAGTCGGAAAATATATCAATTGGTTGTTGTCTGCTATTGCTGGTGAATTTAAGAGTTATCCACGTCTTAGATACCAAGCACTTTCAGTGTGAATCATGTGGTTTAAGAGCCTATAAATAATACTTTAGCTTCTGTGTACTCGACTATAGTAAATATAAGCTAATTATATGACGCATTTTAGTATTTCTATTCCTATCTTGCCCCTAGGATGAAGTGCAATCTTC</gDNA_template>
            <first_frame> G  T  *  *  *  C  S  *  M  S  *  S  G  Q  Y  I  *  *  P  L  E  *  :  G  L  G  S  V  S  S  Q  *  N  T  V  W  S  K  K  H  I  *  *  G  P  L  Y  D  K  A  *  E  R  S  S  D  E  *  V  G  K  R  S  S  K  N  S  *  R  N  *  R  *  G  Y  T  *  S  S  S  S  R   : G  E  R  D  P  T  S  *  E  P  R  S  G  R  G  N  Q  I  F  R  S  C  *  R  D  *  *  *  R  L  *  Q  L  *  G  H  P  V  G  F  T  *  *  *  D  I  S  R  Y  I  *  C  Y  G  E  V  I  Y  *  H  G  Q  K  E  N  E  *  W  C  T  S  F  I  K  I  F  L  H  G  I  I  L  F  T  H  I  H  *  S  L  R  I  V  C  C  G  T  E  A  F  S  F  C  *  D  R  D  D  R  G  R  Y  C  H  I  S  Q  V  S  Q  A  S  R  K  I  Y  Q  L  V  V  V  C  Y  C  W  *  I  *  E  L  S  T  S  *  I  P  S  T  F  S  V  N  H  V  V  *  E  P  I  N  N  T  L  A  S  V  Y  S  T  I  V  N  I  S  *  L  Y  D  A  F  *  Y  F  Y  S  Y  L  A  P  R  M  K  C  N  L  </first_frame>
            <second_frame>  V  P  D  D  D  A  P  E  C  P  D  L  D  N  I  F  D  D  H  W  N  R :   G  W  D  Q  F  Q  A  N  E  T  L  F  G  V  K  S  T  F  D  E  D  L  Y  T  T  K  L  E  R  G  P  Q  M  S  E  L  E  K  E  A  L  R  I  A  R  E  I  E  G  E  D  T  R  D  L  H  L  A  E  :  E  R  G  I  Q  L  H  E  N  L  E  V  D  E  E  T  R  F  S  A  V  V  R  E  I  D  D  S  G  Y  D  N  C  E  D  I  L  L  D  S  R  N  D  E  T  F  Q  G  I  S  S  A  M  G  K  S  F  T  D  M  G  R  R  K  M  N  D  G  A  Q  V  S  L  R  S  S  F  M  V  *  F  C  L  P  T  F  I  S  L  *  E  L  F  V  A  V  L  R  L  F  P  S  V  K  I  G  M  T  E  E  D  I  V  I  L  V  K  Y  L  K  L  V  G  K  Y  I  N  W  L  L  S  A  I  A  G  E  F  K  S  Y  P  R  L  R  Y  Q  A  L  S  V  *  I  M  W  F  K  S  L  *  I  I  L  *  L  L  C  T  R  L  *  *  I  *  A  N  Y  M  T  H  F  S  I  S  I  P  I  L  P  L  G  *  S  A  I  F </second_frame>
            <third_frame>   Y  L  M  M  M  L  L  N  V  L  I  W  T  I  Y  L  M  T  I  G  I   : G  A  G  I  S  F  K  P  M  K  H  C  L  E  *  K  A  H  L  M  R  T  F  I  R  Q  S  L  R  E  V  L  R  *  V  S  W  K  K  K  L  *  E  *  L  E  K  L  K  V  R  I  H  V  I  F  I  *  Q  R :   R  E  G  S  N  F  M  R  T  *  K  W  T  R  K  P  D  F  P  Q  L  L  E  R  L  M  I  A  A  M  T  T  V  R  T  S  C  W  I  H  V  M  M  R  H  F  K  V  Y  L  V  L  W  G  S  H  L  L  T  W  A  E  G  K  *  M  M  V  H  K  F  H  *  D  L  P  S  W  Y  N  F  V  Y  P  H  S  L  V  F  K  N  C  L  L  R  Y  *  G  F  F  L  L  L  R  *  G  *  Q  R  K  I  L  S  Y  *  S  S  I  S  S  *  S  E  N  I  S  I  G  C  C  L  L  L  L  V  N  L  R  V  I  H  V  L  D  T  K  H  F  Q  C  E  S  C  G  L  R  A  Y  K  *  Y  F  S  F  C  V  L  D  Y  S  K  Y  K  L  I  I  *  R  I  L  V  F  L  F  L  S  C  P  *  D  E  V  Q  S   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06SLe0093P23.1" strand="-"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="5964" stop="5900"/>
                    <exon start="4171" stop="3994"/>
                    <exon start="3887" stop="3648"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>480</number_coding_nucleotides>
                  <number_encoded_amino_acids>160</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VPDDDAPECPDLDNIFDDHWNRGWDQFQANETLFGVKSTFDEDLYTTKLERGPQMSELEKEALRIAREIEGEDTRDLHLAEERGIQLHENLEVDEETRFSAVVREIDDSGYDNCEDILLDSRNDETFQGISSAMGKSFTDMGRRKMNDGAQVSLRSSFMV*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="+" PGL_start="20854" PGL_stop="21495"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="20854" e_stop="21391"/>
            <exon e_start="21486" e_stop="21495"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.996" acc_prob="0.999" e_score="0.903"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.903">
            <gDNA_exon_boundary e_start="20854" e_stop="21391" e_length="538"/>
          </exon>
          <intron i_serial="1" don_prob="0.996" acc_prob="0.999">
            <gDNA_intron_boundary i_start="21392" i_stop="21485" i_length="94"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="21486" e_stop="21495" e_length="10"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20854" stop="21391"/>
              <exon start="21486" stop="21495"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U346045" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TGAGATCCACCACCTCTCTCTCGTGATCTCATCTTAATATCTATTTTCCGCCTTTAACGCCTCGGTTACGGAGTAGTATTCTACTCTTTTTTTTTTTCACAAAACCCAATTTCATATTTCTCTCTCTCTCTATCTTTCTTCTTCTTCGCCGTACTCGAATTCAGCTTTTGTTTTTTGTTCCAGGTTGATCTGAAGACTAGTATTTGTGTTTCGTTGTTTGGTTTTCAGATGTAAATCTGTCTTTATTGCTCAAAAAGACTGACCCCCTTCTGTTTAGTTTTTCCAGTTTTGGGGTTAAGTAGTGTGTAACATTAGTCCTCTGTTTCTACTCTGATGGTCAGTAAGTGATGAGTGCTTAGTTTGTCATTAATAGGGTATTTCTTCTTAGTGGGTATTTTGCTAGGTTGAAAATTTGAGGATGTTAACTTGTATAGCATGTTCGAAGCAGCTTAATACTGGATCTCTACGTGAACCAGAGGAAGATGAAACGGCTGCAACACCCAGCAAAAAGCAAGCCATTAAAGCCCTTACTGCTCAG : ATCAAGGATA</gDNA_template>
            <first_frame> *  D  P  P  P  L  S  R  D  L  I  L  I  S  I  F  R  L  *  R  L  G  Y  G  V  V  F  Y  S  F  F  F  S  Q  N  P  I  S  Y  F  S  L  S  L  S  F  F  F  F  A  V  L  E  F  S  F  C  F  L  F  Q  V  D  L  K  T  S  I  C  V  S  L  F  G  F  Q  M  *  I  C  L  Y  C  S  K  R  L  T  P  F  C  L  V  F  P  V  L  G  L  S  S  V  *  H  *  S  S  V  S  T  L  M  V  S  K  *  *  V  L  S  L  S  L  I  G  Y  F  F  L  V  G  I  L  L  G  *  K  F  E  D  V  N  L  Y  S  M  F  E  A  A  *  Y  W  I  S  T  *  T  R  G  R  *  N  G  C  N  T  Q  Q  K  A  S  H  *  S  P  Y  C  S   : D  Q  G   </first_frame>
            <second_frame>  E  I  H  H  L  S  L  V  I  S  S  *  Y  L  F  S  A  F  N  A  S  V  T  E  *  Y  S  T  L  F  F  F  H  K  T  Q  F  H  I  S  L  S  L  Y  L  S  S  S  S  P  Y  S  N  S  A  F  V  F  C  S  R  L  I  *  R  L  V  F  V  F  R  C  L  V  F  R  C  K  S  V  F  I  A  Q  K  D  *  P  P  S  V  *  F  F  Q  F  W  G  *  V  V  C  N  I  S  P  L  F  L  L  *  W  S  V  S  D  E  C  L  V  C  H  *  *  G  I  S  S  *  W  V  F  C  *  V  E  N  L  R  M  L  T  C  I  A  C  S  K  Q  L  N  T  G  S  L  R  E  P  E  E  D  E  T  A  A  T  P  S  K  K  Q  A  I  K  A  L  T  A  Q  :  I  K  D  </second_frame>
            <third_frame>   R  S  T  T  S  L  S  *  S  H  L  N  I  Y  F  P  P  L  T  P  R  L  R  S  S  I  L  L  F  F  F  F  T  K  P  N  F  I  F  L  S  L  S  I  F  L  L  L  R  R  T  R  I  Q  L  L  F  F  V  P  G  *  S  E  D  *  Y  L  C  F  V  V  W  F  S  D  V  N  L  S  L  L  L  K  K  T  D  P  L  L  F  S  F  S  S  F  G  V  K  *  C  V  T  L  V  L  C  F  Y  S  D  G  Q  *  V  M  S  A  *  F  V  I  N  R  V  F  L  L  S  G  Y  F  A  R  L  K  I  *  G  C  *  L  V  *  H  V  R  S  S  L  I  L  D  L  Y  V  N  Q  R  K  M  K  R  L  Q  H  P  A  K  S  K  P  L  K  P  L  L  L  R :   S  R  I </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C06SLe0093P23.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="+" PGL_start="21791" PGL_stop="26514"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="21791" e_stop="21868"/>
            <exon e_start="25970" e_stop="26105"/>
            <exon e_start="26251" e_stop="26514"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.989" e_score="1.000"/>
          <exon-intron don_prob="0.709" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="21791" e_stop="21868" e_length="78"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.989">
            <gDNA_intron_boundary i_start="21869" i_stop="25969" i_length="4101"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="25970" e_stop="26105" e_length="136"/>
          </exon>
          <intron i_serial="2" don_prob="0.709" acc_prob="0.999">
            <gDNA_intron_boundary i_start="26106" i_stop="26250" i_length="145"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="26251" e_stop="26514" e_length="264"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21791" stop="21868"/>
              <exon start="25970" stop="26105"/>
              <exon start="26251" stop="26514"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U344890" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TCAGGTGGAGCCTGGTGTTCTAATCACGTTTGTTTCTCTACCTGAAGGTGGAAACGATCTGAAACGAATTCGATTCAG : CCGTGAGCTATTTAACAAGTGGCAAGCTCAACGTTGGTGGGCTGAGAATTATGACAAGGTCATGGAATTATACAATGTCCACAGGTTCAATCGACGAACAGTACCGTTGCCAATCCCTCCGAGGTCTGAAGATGAG : AACTTGAAGCTTGATTATGCTGAGAGTAGTCCAGTAACACCTCCACTAACGAAAGAGCGTCTTCCTAGCCACTTTCATCGTTCAACAGGAGTGGAACACTTGTCATCAGGCTCTGTTGAAAGAGATCCATCACAGGGTCATCATTATTATGATGCAGGTGGTCTCACTTCGACCCCTAAGCTCTCCAACATCAGTGCGACAAAAAGTGAGGCACCGTCAATGGATGCTTCTGCACGGTCTAGCTCTTCAAGGGAGGCTGATCGC</gDNA_template>
            <first_frame> S  G  G  A  W  C  S  N  H  V  C  F  S  T  *  R  W  K  R  S  E  T  N  S  I  Q  :  P  *  A  I  *  Q  V  A  S  S  T  L  V  G  *  E  L  *  Q  G  H  G  I  I  Q  C  P  Q  V  Q  S  T  N  S  T  V  A  N  P  S  E  V  *  R  *   : E  L  E  A  *  L  C  *  E  *  S  S  N  T  S  T  N  E  R  A  S  S  *  P  L  S  S  F  N  R  S  G  T  L  V  I  R  L  C  *  K  R  S  I  T  G  S  S  L  L  *  C  R  W  S  H  F  D  P  *  A  L  Q  H  Q  C  D  K  K  *  G  T  V  N  G  C  F  C  T  V  *  L  F  K  G  G  *  S  </first_frame>
            <second_frame>  Q  V  E  P  G  V  L  I  T  F  V  S  L  P  E  G  G  N  D  L  K  R  I  R  F  S :   R  E  L  F  N  K  W  Q  A  Q  R  W  W  A  E  N  Y  D  K  V  M  E  L  Y  N  V  H  R  F  N  R  R  T  V  P  L  P  I  P  P  R  S  E  D  E  :  N  L  K  L  D  Y  A  E  S  S  P  V  T  P  P  L  T  K  E  R  L  P  S  H  F  H  R  S  T  G  V  E  H  L  S  S  G  S  V  E  R  D  P  S  Q  G  H  H  Y  Y  D  A  G  G  L  T  S  T  P  K  L  S  N  I  S  A  T  K  S  E  A  P  S  M  D  A  S  A  R  S  S  S  S  R  E  A  D  R </second_frame>
            <third_frame>   R  W  S  L  V  F  *  S  R  L  F  L  Y  L  K  V  E  T  I  *  N  E  F  D  S   : A  V  S  Y  L  T  S  G  K  L  N  V  G  G  L  R  I  M  T  R  S  W  N  Y  T  M  S  T  G  S  I  D  E  Q  Y  R  C  Q  S  L  R  G  L  K  M  R :   T  *  S  L  I  M  L  R  V  V  Q  *  H  L  H  *  R  K  S  V  F  L  A  T  F  I  V  Q  Q  E  W  N  T  C  H  Q  A  L  L  K  E  I  H  H  R  V  I  I  I  M  M  Q  V  V  S  L  R  P  L  S  S  P  T  S  V  R  Q  K  V  R  H  R  Q  W  M  L  L  H  G  L  A  L  Q  G  R  L  I   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06SLe0093P23.1" strand="+"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="21792" stop="21868"/>
                    <exon start="25970" stop="26105"/>
                    <exon start="26251" stop="26514"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>477</number_coding_nucleotides>
                  <number_encoded_amino_acids>159</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QVEPGVLITFVSLPEGGNDLKRIRFSRELFNKWQAQRWWAENYDKVMELYNVHRFNRRTVPLPIPPRSEDENLKLDYAESSPVTPPLTKERLPSHFHRSTGVEHLSSGSVERDPSQGHHYYDAGGLTSTPKLSNISATKSEAPSMDASARSSSSREADR</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="+" PGL_start="28187" PGL_stop="37925"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="28187" e_stop="28465"/>
            <exon e_start="29757" e_stop="29868"/>
            <exon e_start="29967" e_stop="30124"/>
            <exon e_start="31084" e_stop="31301"/>
            <exon e_start="34930" e_stop="35219"/>
            <exon e_start="35492" e_stop="35566"/>
            <exon e_start="36017" e_stop="36095"/>
            <exon e_start="37064" e_stop="37128"/>
            <exon e_start="37475" e_stop="37510"/>
            <exon e_start="37573" e_stop="37925"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.962" acc_prob="0.936" e_score="0.950"/>
          <exon-intron don_prob="0.907" acc_prob="0.988" e_score="1.000"/>
          <exon-intron don_prob="0.307" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.181" e_score="1.000"/>
          <exon-intron don_prob="0.978" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.964" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.802" acc_prob="0.952" e_score="1.000"/>
          <exon-intron don_prob="0.986" acc_prob="0.977" e_score="1.000"/>
          <exon-intron don_prob="0.909" acc_prob="0.861" e_score="1.000"/>
          <exon-only e_score="0.992"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.950">
            <gDNA_exon_boundary e_start="28187" e_stop="28465" e_length="279"/>
          </exon>
          <intron i_serial="1" don_prob="0.962" acc_prob="0.936">
            <gDNA_intron_boundary i_start="28466" i_stop="29756" i_length="1291"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="29757" e_stop="29868" e_length="112"/>
          </exon>
          <intron i_serial="2" don_prob="0.907" acc_prob="0.988">
            <gDNA_intron_boundary i_start="29869" i_stop="29966" i_length="98"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="29967" e_stop="30124" e_length="158"/>
          </exon>
          <intron i_serial="3" don_prob="0.307" acc_prob="0.999">
            <gDNA_intron_boundary i_start="30125" i_stop="31083" i_length="959"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="31084" e_stop="31301" e_length="218"/>
          </exon>
          <intron i_serial="4" don_prob="0.996" acc_prob="0.181">
            <gDNA_intron_boundary i_start="31302" i_stop="34929" i_length="3628"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="34930" e_stop="35219" e_length="290"/>
          </exon>
          <intron i_serial="5" don_prob="0.978" acc_prob="0.994">
            <gDNA_intron_boundary i_start="35220" i_stop="35491" i_length="272"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="35492" e_stop="35566" e_length="75"/>
          </exon>
          <intron i_serial="6" don_prob="0.964" acc_prob="0.993">
            <gDNA_intron_boundary i_start="35567" i_stop="36016" i_length="450"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="36017" e_stop="36095" e_length="79"/>
          </exon>
          <intron i_serial="7" don_prob="0.802" acc_prob="0.952">
            <gDNA_intron_boundary i_start="36096" i_stop="37063" i_length="968"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="37064" e_stop="37128" e_length="65"/>
          </exon>
          <intron i_serial="8" don_prob="0.986" acc_prob="0.977">
            <gDNA_intron_boundary i_start="37129" i_stop="37474" i_length="346"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="37475" e_stop="37510" e_length="36"/>
          </exon>
          <intron i_serial="9" don_prob="0.909" acc_prob="0.861">
            <gDNA_intron_boundary i_start="37511" i_stop="37572" i_length="62"/>
          </intron>
          <exon e_serial="10" e_score="0.992">
            <gDNA_exon_boundary e_start="37573" e_stop="37925" e_length="353"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28187" stop="28465"/>
              <exon start="29757" stop="29868"/>
              <exon start="29967" stop="30124"/>
              <exon start="31084" stop="31301"/>
              <exon start="34930" stop="35219"/>
              <exon start="35492" stop="35566"/>
              <exon start="36017" stop="36095"/>
              <exon start="37064" stop="37128"/>
              <exon start="37475" stop="37510"/>
              <exon start="37573" stop="37925"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U322786" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAAATCCATTTTCCATCTCCCACAACACACCCAGAACACAGTTATATTGAGCATATGGATATTTAGCTATTTTTTTTGAAAAATGCTGAATTTTCTTATCCAAGCGTTTTCAATGAAACACAGCAACAAATACTCTTCCAATTTTATTTTTTTTAACCATATCCTGTCGGCAATTGATTGAGAAATCAGCAACCTGTTGATTTGAATCAGAATTTTCTCCGGTCAAGCTTGTTGCAGGCACTGCCCAGTTCAACTTGCAGTTTCAGCTTCTGGATTTCG : GAATTCAACTTGATCAGCATAATTGGACAAACTGTCAAGCTGCCTCTGTTGTCTGGATAGTCTTGTTGCAGGCACTGCCTAGTTTAATTTGCAATTCCAACTTTTGGATTCG : CGGAGATGTGGAGGGGTTGGATGTAGTAGTCACGAGGGAGAGGTGGAGCTAGAGTAGGCTGAAAAAGTATTAAGGAAAAGTGATTAGACACAACATGATGCAGCTTCTGACCTTAGATAAGAGGGAGAGGGAATGGAGACTGCGGACCGCCTAAAAGG : GCACGCCATGATGGCAGGATTGATGCAGTCTTCTCTGTGTCATTTCCGTGGACAGTCTTTTCAGGGATGCAGGCAATGGGAAACTGGGAATATTGGGATCTCTCAATTTGAGCTCTCAACTCAGGGCACATCGGGTCCTTGCATATGCCCAACAAAGGATGAACAAAGGTCAACTACGGAAGACGTTGTCTCAGCAAACTTCCCTCATCATCAGTCAG : AAGAGTTATCGCAAACTGCACAGCCGGCACAACAGCAATTGGGGTATCCGCAGATGCATCAGAATCAGCAGCTCCAACAGCAACAACAACAACCTCAGCAGGTTTTGCATCAGCAGCAATCTTCTCCAGCAATGAATTCCCCTGGTGGTCATAATTTACTGAGTTTGACTGGATCAGAACCAGATGCCACTGGATCTGGGACAACGACTCCTGGGAGTAGTTCAAGCCAGGGGGCTGAAGCAAGCAATCAGTTTCTTGGGAAGAGAAAGATTCAGGATTTAGTTTCACAG : GTGGATCCTCAGGGAAGAGTTGATCCTGAAGTTGAACAGTTTCTTTTAGAGATCGCTGATGACTTTATTGATTCG : GTTACTACATTTTCTTGCAATTTGGCGAAGCATCGGAAATCTTCGACTCTGGAGTCCAAAGATATACTGTTACATTTAG : AGAAAGATTGGAATTTGACTGTCCCAGGTTTTTCAAGTGAGGATAAGAAACACTGCCCTGAACAT : TCATCAGGTGATCTCTGCAAAGAGCGTTTGGAAATG : TCTTTGTGCTTGACTCAGATACCTGATATGATGGAGGCTTCACCACAAGCTGAAGCAAGTACAAGCAGCAGCGCGAAGGAGATCGTAAGTCCAGGGCTGGGTGACCAGGTTGGTTCGACTGACATAATCGGACCACCAAGTTCAGAGGAATTGGCTTCACCATCTAATGGTGAAATATAGTTCAACTATAACAAGATGTGATGTTCCGTGGAGATTGGTATACCCCTTGCTTTACTGTAATAAAACCTTTTTCAACTTTAGTTTGCTTGTCGACTGAAGAACGTGAACATAAGTCTGTTATGAATATTCATGACCTTTTGTTGGTATGTTATGTTAAGTTTTCTTTATTATTT</gDNA_template>
            <first_frame> K  I  H  F  P  S  P  T  T  H  P  E  H  S  Y  I  E  H  M  D  I  *  L  F  F  L  K  N  A  E  F  S  Y  P  S  V  F  N  E  T  Q  Q  Q  I  L  F  Q  F  Y  F  F  *  P  Y  P  V  G  N  *  L  R  N  Q  Q  P  V  D  L  N  Q  N  F  L  R  S  S  L  L  Q  A  L  P  S  S  T  C  S  F  S  F  W  I  S  :  E  F  N  L  I  S  I  I  G  Q  T  V  K  L  P  L  L  S  G  *  S  C  C  R  H  C  L  V  *  F  A  I  P  T  F  G  F   : A  E  M  W  R  G  W  M  *  *  S  R  G  R  G  G  A  R  V  G  *  K  S  I  K  E  K  *  L  D  T  T  *  C  S  F  *  P  *  I  R  G  R  G  N  G  D  C  G  P  P  K  R  :  A  R  H  D  G  R  I  D  A  V  F  S  V  S  F  P  W  T  V  F  S  G  M  Q  A  M  G  N  W  E  Y  W  D  L  S  I  *  A  L  N  S  G  H  I  G  S  L  H  M  P  N  K  G  *  T  K  V  N  Y  G  R  R  C  L  S  K  L  P  S  S  S  V  R :   R  V  I  A  N  C  T  A  G  T  T  A  I  G  V  S  A  D  A  S  E  S  A  A  P  T  A  T  T  T  T  S  A  G  F  A  S  A  A  I  F  S  S  N  E  F  P  W  W  S  *  F  T  E  F  D  W  I  R  T  R  C  H  W  I  W  D  N  D  S  W  E  *  F  K  P  G  G  *  S  K  Q  S  V  S  W  E  E  K  D  S  G  F  S  F  T   : G  G  S  S  G  K  S  *  S  *  S  *  T  V  S  F  R  D  R  *  *  L  Y  *  F   : G  Y  Y  I  F  L  Q  F  G  E  A  S  E  I  F  D  S  G  V  Q  R  Y  T  V  T  F  R :   E  R  L  E  F  D  C  P  R  F  F  K  *  G  *  E  T  L  P  *  T   : F  I  R  *  S  L  Q  R  A  F  G  N   : V  F  V  L  D  S  D  T  *  Y  D  G  G  F  T  T  S  *  S  K  Y  K  Q  Q  R  E  G  D  R  K  S  R  A  G  *  P  G  W  F  D  *  H  N  R  T  T  K  F  R  G  I  G  F  T  I  *  W  *  N  I  V  Q  L  *  Q  D  V  M  F  R  G  D  W  Y  T  P  C  F  T  V  I  K  P  F  S  T  L  V  C  L  S  T  E  E  R  E  H  K  S  V  M  N  I  H  D  L  L  L  V  C  Y  V  K  F  S  L  L  F </first_frame>
            <second_frame>  K  S  I  F  H  L  P  Q  H  T  Q  N  T  V  I  L  S  I  W  I  F  S  Y  F  F  *  K  M  L  N  F  L  I  Q  A  F  S  M  K  H  S  N  K  Y  S  S  N  F  I  F  F  N  H  I  L  S  A  I  D  *  E  I  S  N  L  L  I  *  I  R  I  F  S  G  Q  A  C  C  R  H  C  P  V  Q  L  A  V  S  A  S  G  F  R :   N  S  T  *  S  A  *  L  D  K  L  S  S  C  L  C  C  L  D  S  L  V  A  G  T  A  *  F  N  L  Q  F  Q  L  L  D  S  :  R  R  C  G  G  V  G  C  S  S  H  E  G  E  V  E  L  E  *  A  E  K  V  L  R  K  S  D  *  T  Q  H  D  A  A  S  D  L  R  *  E  G  E  G  M  E  T  A  D  R  L  K  G :   H  A  M  M  A  G  L  M  Q  S  S  L  C  H  F  R  G  Q  S  F  Q  G  C  R  Q  W  E  T  G  N  I  G  I  S  Q  F  E  L  S  T  Q  G  T  S  G  P  C  I  C  P  T  K  D  E  Q  R  S  T  T  E  D  V  V  S  A  N  F  P  H  H  Q  S   : E  E  L  S  Q  T  A  Q  P  A  Q  Q  Q  L  G  Y  P  Q  M  H  Q  N  Q  Q  L  Q  Q  Q  Q  Q  Q  P  Q  Q  V  L  H  Q  Q  Q  S  S  P  A  M  N  S  P  G  G  H  N  L  L  S  L  T  G  S  E  P  D  A  T  G  S  G  T  T  T  P  G  S  S  S  S  Q  G  A  E  A  S  N  Q  F  L  G  K  R  K  I  Q  D  L  V  S  Q  :  V  D  P  Q  G  R  V  D  P  E  V  E  Q  F  L  L  E  I  A  D  D  F  I  D  S  :  V  T  T  F  S  C  N  L  A  K  H  R  K  S  S  T  L  E  S  K  D  I  L  L  H  L   : E  K  D  W  N  L  T  V  P  G  F  S  S  E  D  K  K  H  C  P  E  H  :  S  S  G  D  L  C  K  E  R  L  E  M  :  S  L  C  L  T  Q  I  P  D  M  M  E  A  S  P  Q  A  E  A  S  T  S  S  S  A  K  E  I  V  S  P  G  L  G  D  Q  V  G  S  T  D  I  I  G  P  P  S  S  E  E  L  A  S  P  S  N  G  E  I  *  F  N  Y  N  K  M  *  C  S  V  E  I  G  I  P  L  A  L  L  *  *  N  L  F  Q  L  *  F  A  C  R  L  K  N  V  N  I  S  L  L  *  I  F  M  T  F  C  W  Y  V  M  L  S  F  L  Y  Y   </second_frame>
            <third_frame>   N  P  F  S  I  S  H  N  T  P  R  T  Q  L  Y  *  A  Y  G  Y  L  A  I  F  F  E  K  C  *  I  F  L  S  K  R  F  Q  *  N  T  A  T  N  T  L  P  I  L  F  F  L  T  I  S  C  R  Q  L  I  E  K  S  A  T  C  *  F  E  S  E  F  S  P  V  K  L  V  A  G  T  A  Q  F  N  L  Q  F  Q  L  L  D  F   : G  I  Q  L  D  Q  H  N  W  T  N  C  Q  A  A  S  V  V  W  I  V  L  L  Q  A  L  P  S  L  I  C  N  S  N  F  W  I  R :   G  D  V  E  G  L  D  V  V  V  T  R  E  R  W  S  *  S  R  L  K  K  Y  *  G  K  V  I  R  H  N  M  M  Q  L  L  T  L  D  K  R  E  R  E  W  R  L  R  T  A  *  K   : G  T  P  *  W  Q  D  *  C  S  L  L  C  V  I  S  V  D  S  L  F  R  D  A  G  N  G  K  L  G  I  L  G  S  L  N  L  S  S  Q  L  R  A  H  R  V  L  A  Y  A  Q  Q  R  M  N  K  G  Q  L  R  K  T  L  S  Q  Q  T  S  L  I  I  S  Q  :  K  S  Y  R  K  L  H  S  R  H  N  S  N  W  G  I  R  R  C  I  R  I  S  S  S  N  S  N  N  N  N  L  S  R  F  C  I  S  S  N  L  L  Q  Q  *  I  P  L  V  V  I  I  Y  *  V  *  L  D  Q  N  Q  M  P  L  D  L  G  Q  R  L  L  G  V  V  Q  A  R  G  L  K  Q  A  I  S  F  L  G  R  E  R  F  R  I  *  F  H  R :   W  I  L  R  E  E  L  I  L  K  L  N  S  F  F  *  R  S  L  M  T  L  L  I  R :   L  L  H  F  L  A  I  W  R  S  I  G  N  L  R  L  W  S  P  K  I  Y  C  Y  I  *  :  R  K  I  G  I  *  L  S  Q  V  F  Q  V  R  I  R  N  T  A  L  N  I :   H  Q  V  I  S  A  K  S  V  W  K  C :   L  C  A  *  L  R  Y  L  I  *  W  R  L  H  H  K  L  K  Q  V  Q  A  A  A  R  R  R  S  *  V  Q  G  W  V  T  R  L  V  R  L  T  *  S  D  H  Q  V  Q  R  N  W  L  H  H  L  M  V  K  Y  S  S  T  I  T  R  C  D  V  P  W  R  L  V  Y  P  L  L  Y  C  N  K  T  F  F  N  F  S  L  L  V  D  *  R  T  *  T  *  V  C  Y  E  Y  S  *  P  F  V  G  M  L  C  *  V  F  F  I  I  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06SLe0093P23.1" strand="+"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="30087" stop="30124"/>
                    <exon start="31084" stop="31301"/>
                    <exon start="34930" stop="35219"/>
                    <exon start="35492" stop="35566"/>
                    <exon start="36017" stop="36095"/>
                    <exon start="37064" stop="37128"/>
                    <exon start="37475" stop="37510"/>
                    <exon start="37573" stop="37752"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>978</number_coding_nucleotides>
                  <number_encoded_amino_acids>326</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EGEGMETADRLKGHAMMAGLMQSSLCHFRGQSFQGCRQWETGNIGISQFELSTQGTSGPCICPTKDEQRSTTEDVVSANFPHHQSEELSQTAQPAQQQLGYPQMHQNQQLQQQQQQPQQVLHQQQSSPAMNSPGGHNLLSLTGSEPDATGSGTTTPGSSSSQGAEASNQFLGKRKIQDLVSQVDPQGRVDPEVEQFLLEIADDFIDSVTTFSCNLAKHRKSSTLESKDILLHLEKDWNLTVPGFSSEDKKHCPEHSSGDLCKERLEMSLCLTQIPDMMEASPQAEASTSSSAKEIVSPGLGDQVGSTDIIGPPSSEELASPSNGEI*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06SLe0093P23.1" strand="+"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="28387" stop="28465"/>
                    <exon start="29757" stop="29868"/>
                    <exon start="29967" stop="30018"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>240</number_coding_nucleotides>
                  <number_encoded_amino_acids>80</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FESEFSPVKLVAGTAQFNLQFQLLDFGIQLDQHNWTNCQAASVVWIVLLQALPSLICNSNFWIRGDVEGLDVVVTRERWS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="33909" e_stop="34559"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.997">
            <gDNA_exon_boundary e_start="33909" e_stop="34559" e_length="651"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33909" stop="34559"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U343351" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TGGTTATGGTGATGGTAGAGGTGGGCGGTTGTCGACAAAGTGGTACTTAATAATATTACACTTTATTCAATGTTTTAATGATTTAGACCAATTCAGAACAAATAAATGTTTAAATCTTAACGTAAACAAATGCATTTAATGCCTAAGGTTTGAAATATTCAGATTTAGACCTCCATGAAGTGCAAAATATTGAACCCTAAGACTTACTTTGCATGTGCTGATTATCCTTGGAAAATAAATATGCCTGAGAACTATAAAGGGAAAAGTACTGCCCAATACCTATGGGCCATCTAGTTTACAAAATATGTATACAATGTATATGTAGTGTATGCTTAATACTAAATATTGTACATGCCTCTAGTGTATATTCTGGTCATGTATGGTAAATTAGATAGTCAAATAGTATATATTGGTAACCATCCCAACTGTAAATCCCCTTTTAATAAAAAATAGATCAACTGAAGGACATCGCAATTGTTGCATTTAGGTCCATATGTATACCTTTGAGTTTTCTTGTTAAATCTCAACCCTTAGTGTCATGTAAGTTATACATTAAAATATAGCTCCGAACAAATATGTTTGTGTGATTGTGATTAAAGTTATGTCTGCATGCTTTTGTATATGTGTTGAAACTGAGAGCATTTAAAGCTA</gDNA_template>
            <first_frame> W  L  W  *  W  *  R  W  A  V  V  D  K  V  V  L  N  N  I  T  L  Y  S  M  F  *  *  F  R  P  I  Q  N  K  *  M  F  K  S  *  R  K  Q  M  H  L  M  P  K  V  *  N  I  Q  I  *  T  S  M  K  C  K  I  L  N  P  K  T  Y  F  A  C  A  D  Y  P  W  K  I  N  M  P  E  N  Y  K  G  K  S  T  A  Q  Y  L  W  A  I  *  F  T  K  Y  V  Y  N  V  Y  V  V  Y  A  *  Y  *  I  L  Y  M  P  L  V  Y  I  L  V  M  Y  G  K  L  D  S  Q  I  V  Y  I  G  N  H  P  N  C  K  S  P  F  N  K  K  *  I  N  *  R  T  S  Q  L  L  H  L  G  P  Y  V  Y  L  *  V  F  L  L  N  L  N  P  *  C  H  V  S  Y  T  L  K  Y  S  S  E  Q  I  C  L  C  D  C  D  *  S  Y  V  C  M  L  L  Y  M  C  *  N  *  E  H  L  K  L </first_frame>
            <second_frame>  G  Y  G  D  G  R  G  G  R  L  S  T  K  W  Y  L  I  I  L  H  F  I  Q  C  F  N  D  L  D  Q  F  R  T  N  K  C  L  N  L  N  V  N  K  C  I  *  C  L  R  F  E  I  F  R  F  R  P  P  *  S  A  K  Y  *  T  L  R  L  T  L  H  V  L  I  I  L  G  K  *  I  C  L  R  T  I  K  G  K  V  L  P  N  T  Y  G  P  S  S  L  Q  N  M  Y  T  M  Y  M  *  C  M  L  N  T  K  Y  C  T  C  L  *  C  I  F  W  S  C  M  V  N  *  I  V  K  *  Y  I  L  V  T  I  P  T  V  N  P  L  L  I  K  N  R  S  T  E  G  H  R  N  C  C  I  *  V  H  M  Y  T  F  E  F  S  C  *  I  S  T  L  S  V  M  *  V  I  H  *  N  I  A  P  N  K  Y  V  C  V  I  V  I  K  V  M  S  A  C  F  C  I  C  V  E  T  E  S  I  *  S   </second_frame>
            <third_frame>   V  M  V  M  V  E  V  G  G  C  R  Q  S  G  T  *  *  Y  Y  T  L  F  N  V  L  M  I  *  T  N  S  E  Q  I  N  V  *  I  L  T  *  T  N  A  F  N  A  *  G  L  K  Y  S  D  L  D  L  H  E  V  Q  N  I  E  P  *  D  L  L  C  M  C  *  L  S  L  E  N  K  Y  A  *  E  L  *  R  E  K  Y  C  P  I  P  M  G  H  L  V  Y  K  I  C  I  Q  C  I  C  S  V  C  L  I  L  N  I  V  H  A  S  S  V  Y  S  G  H  V  W  *  I  R  *  S  N  S  I  Y  W  *  P  S  Q  L  *  I  P  F  *  *  K  I  D  Q  L  K  D  I  A  I  V  A  F  R  S  I  C  I  P  L  S  F  L  V  K  S  Q  P  L  V  S  C  K  L  Y  I  K  I  *  L  R  T  N  M  F  V  *  L  *  L  K  L  C  L  H  A  F  V  Y  V  L  K  L  R  A  F  K  A  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C06SLe0093P23.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="+" PGL_start="40894" PGL_stop="41189"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="40894" e_stop="41189"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.922"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.922">
            <gDNA_exon_boundary e_start="40894" e_stop="41189" e_length="296"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="40894" stop="41189"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U339975" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTAACCCAATTTACGACCCGATTCTATCCCATATCCGACCCGTTTCCCTGCGTAATCACCTCGACACCAATCTATGATGCCCTAGTTCTTGGGGGCATCATCATCTTCAACAGTTCCTCTTTGATTCTTACAAATTTCTGGAAGAAATCAACATTTTGGGATCGTTTTTTGGGGACGCATTTGGTTGATTTCTCGAGATTAGAGAGACAATTGGTGGGTGCCATTTATTTTGCAGATTGATGAACCCTAGCTATTTATGCCTGATTGTAAATTTGGTGAAGATTTTGCTTAATTGA</gDNA_template>
            <first_frame> L  T  Q  F  T  T  R  F  Y  P  I  S  D  P  F  P  C  V  I  T  S  T  P  I  Y  D  A  L  V  L  G  G  I  I  I  F  N  S  S  S  L  I  L  T  N  F  W  K  K  S  T  F  W  D  R  F  L  G  T  H  L  V  D  F  S  R  L  E  R  Q  L  V  G  A  I  Y  F  A  D  *  *  T  L  A  I  Y  A  *  L  *  I  W  *  R  F  C  L  I   </first_frame>
            <second_frame>  *  P  N  L  R  P  D  S  I  P  Y  P  T  R  F  P  A  *  S  P  R  H  Q  S  M  M  P  *  F  L  G  A  S  S  S  S  T  V  P  L  *  F  L  Q  I  S  G  R  N  Q  H  F  G  I  V  F  W  G  R  I  W  L  I  S  R  D  *  R  D  N  W  W  V  P  F  I  L  Q  I  D  E  P  *  L  F  M  P  D  C  K  F  G  E  D  F  A  *  L  </second_frame>
            <third_frame>   N  P  I  Y  D  P  I  L  S  H  I  R  P  V  S  L  R  N  H  L  D  T  N  L  *  C  P  S  S  W  G  H  H  H  L  Q  Q  F  L  F  D  S  Y  K  F  L  E  E  I  N  I  L  G  S  F  F  G  D  A  F  G  *  F  L  E  I  R  E  T  I  G  G  C  H  L  F  C  R  L  M  N  P  S  Y  L  C  L  I  V  N  L  V  K  I  L  L  N  * </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06SLe0093P23.1" strand="+"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="40894" stop="41133"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>237</number_coding_nucleotides>
                  <number_encoded_amino_acids>79</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LTQFTTRFYPISDPFPCVITSTPIYDALVLGGIIIFNSSSLILTNFWKKSTFWDRFLGTHLVDFSRLERQLVGAIYFAD*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="+" PGL_start="41401" PGL_stop="43179"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="41401" e_stop="41920"/>
            <exon e_start="42314" e_stop="42372"/>
            <exon e_start="42878" e_stop="43179"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.937" acc_prob="0.984" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.994" e_score="1.000"/>
          <exon-only e_score="0.983"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="41401" e_stop="41920" e_length="520"/>
          </exon>
          <intron i_serial="1" don_prob="0.937" acc_prob="0.984">
            <gDNA_intron_boundary i_start="41921" i_stop="42313" i_length="393"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="42314" e_stop="42372" e_length="59"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.994">
            <gDNA_intron_boundary i_start="42373" i_stop="42877" i_length="505"/>
          </intron>
          <exon e_serial="3" e_score="0.983">
            <gDNA_exon_boundary e_start="42878" e_stop="43179" e_length="302"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="41401" stop="41920"/>
              <exon start="42314" stop="42372"/>
              <exon start="42878" stop="43179"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U325074" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TCTCAGCAAAATGTGAGTCCTCCTTCTCCGCCGCCGCCGCCGTCTAACCAATCTCCTCCTCCACCGCCTCCACCACCATCACCAGGGCCTCCTCCTCCTCCATCCCAGCAAAAATACCATTCTCCACCACCAACTAAATCTGTGAATTCTGCGACCACCTCGGAGAGTAAACACTCTAATCATGATAAAAAACACCATAACTCTTACGGGAAATCGCATCAACCAGCAAAGAAAAAGAAGCCAAATTTGGGGAAGAAACTGGGGTTAGTGTTTGTGGGTGTTGCTGGGATGTTGCAGGTGTGTGTGGTGGCGTTCTTGCTAATAAAGAGAAGACAATTGTTAAAGGCTGGTAGTAGATTTTGAATGAACATTTGAATATGGATGTATATCAGTTAGTCTAATTAATTCAGAATTTTACGAGACCGCGAAAGGCAATGAACACGGCATTGATGAATTAGAAGCATTGGGTTCATCTGACATGTAGATTTCTGCATTTGCATTGGTGGCTACTGTAAATTTG : AGCATGTTGAGAAATACAGATGAATGTGCAGACTTCGGATGCTTTGTTTCTAGTTGCTC : GTCTCAAAGTTGTAAGAATGATATCTTGCTTCGTTTGTCAATTTTAAGGAACTGTACTGGATTTGTTCTGGAGAACATAGTGTTACGTCTTCTCTGTCCGGTGAGTAAAAAATGTAGGGAAACGAGCATACTGTTGATGAAGGCATGACCTGTCATCGTCGCAACTGAAATATGATTTCTAATGTAGAGGTTTAACACTGTAAAACTCTTTTAACTGTTGGTATAGTCTAACTGTTGCATCTGATATGAAAACTTTCTAATACGCTGGCAAAATAATATCTACCTTGATTCTTGAATAATGT</gDNA_template>
            <first_frame> S  Q  Q  N  V  S  P  P  S  P  P  P  P  P  S  N  Q  S  P  P  P  P  P  P  P  P  S  P  G  P  P  P  P  P  S  Q  Q  K  Y  H  S  P  P  P  T  K  S  V  N  S  A  T  T  S  E  S  K  H  S  N  H  D  K  K  H  H  N  S  Y  G  K  S  H  Q  P  A  K  K  K  K  P  N  L  G  K  K  L  G  L  V  F  V  G  V  A  G  M  L  Q  V  C  V  V  A  F  L  L  I  K  R  R  Q  L  L  K  A  G  S  R  F  *  M  N  I  *  I  W  M  Y  I  S  *  S  N  *  F  R  I  L  R  D  R  E  R  Q  *  T  R  H  *  *  I  R  S  I  G  F  I  *  H  V  D  F  C  I  C  I  G  G  Y  C  K  F   : E  H  V  E  K  Y  R  *  M  C  R  L  R  M  L  C  F  *  L  L  :  V  S  K  L  *  E  *  Y  L  A  S  F  V  N  F  K  E  L  Y  W  I  C  S  G  E  H  S  V  T  S  S  L  S  G  E  *  K  M  *  G  N  E  H  T  V  D  E  G  M  T  C  H  R  R  N  *  N  M  I  S  N  V  E  V  *  H  C  K  T  L  L  T  V  G  I  V  *  L  L  H  L  I  *  K  L  S  N  T  L  A  K  *  Y  L  P  *  F  L  N  N   </first_frame>
            <second_frame>  L  S  K  M  *  V  L  L  L  R  R  R  R  R  L  T  N  L  L  L  H  R  L  H  H  H  H  Q  G  L  L  L  L  H  P  S  K  N  T  I  L  H  H  Q  L  N  L  *  I  L  R  P  P  R  R  V  N  T  L  I  M  I  K  N  T  I  T  L  T  G  N  R  I  N  Q  Q  R  K  R  S  Q  I  W  G  R  N  W  G  *  C  L  W  V  L  L  G  C  C  R  C  V  W  W  R  S  C  *  *  R  E  D  N  C  *  R  L  V  V  D  F  E  *  T  F  E  Y  G  C  I  S  V  S  L  I  N  S  E  F  Y  E  T  A  K  G  N  E  H  G  I  D  E  L  E  A  L  G  S  S  D  M  *  I  S  A  F  A  L  V  A  T  V  N  L  :  S  M  L  R  N  T  D  E  C  A  D  F  G  C  F  V  S  S  C  S :   S  Q  S  C  K  N  D  I  L  L  R  L  S  I  L  R  N  C  T  G  F  V  L  E  N  I  V  L  R  L  L  C  P  V  S  K  K  C  R  E  T  S  I  L  L  M  K  A  *  P  V  I  V  A  T  E  I  *  F  L  M  *  R  F  N  T  V  K  L  F  *  L  L  V  *  S  N  C  C  I  *  Y  E  N  F  L  I  R  W  Q  N  N  I  Y  L  D  S  *  I  M  </second_frame>
            <third_frame>   S  A  K  C  E  S  S  F  S  A  A  A  A  V  *  P  I  S  S  S  T  A  S  T  T  I  T  R  A  S  S  S  S  I  P  A  K  I  P  F  S  T  T  N  *  I  C  E  F  C  D  H  L  G  E  *  T  L  *  S  *  *  K  T  P  *  L  L  R  E  I  A  S  T  S  K  E  K  E  A  K  F  G  E  E  T  G  V  S  V  C  G  C  C  W  D  V  A  G  V  C  G  G  V  L  A  N  K  E  K  T  I  V  K  G  W  *  *  I  L  N  E  H  L  N  M  D  V  Y  Q  L  V  *  L  I  Q  N  F  T  R  P  R  K  A  M  N  T  A  L  M  N  *  K  H  W  V  H  L  T  C  R  F  L  H  L  H  W  W  L  L  *  I  * :   A  C  *  E  I  Q  M  N  V  Q  T  S  D  A  L  F  L  V  A   : R  L  K  V  V  R  M  I  S  C  F  V  C  Q  F  *  G  T  V  L  D  L  F  W  R  T  *  C  Y  V  F  S  V  R  *  V  K  N  V  G  K  R  A  Y  C  *  *  R  H  D  L  S  S  S  Q  L  K  Y  D  F  *  C  R  G  L  T  L  *  N  S  F  N  C  W  Y  S  L  T  V  A  S  D  M  K  T  F  *  Y  A  G  K  I  I  S  T  L  I  L  E  *  C </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06SLe0093P23.1" strand="+"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="41401" stop="41763"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>360</number_coding_nucleotides>
                  <number_encoded_amino_acids>120</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SQQNVSPPSPPPPPSNQSPPPPPPPPSPGPPPPPSQQKYHSPPPTKSVNSATTSESKHSNHDKKHHNSYGKSHQPAKKKKPNLGKKLGLVFVGVAGMLQVCVVAFLLIKRRQLLKAGSRF*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06SLe0093P23.1" strand="+"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="41885" stop="41920"/>
                    <exon start="42314" stop="42372"/>
                    <exon start="42878" stop="43025"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>240</number_coding_nucleotides>
                  <number_encoded_amino_acids>80</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ISAFALVATVNLSMLRNTDECADFGCFVSSCSSQSCKNDILLRLSILRNCTGFVLENIVLRLLCPVSKKCRETSILLMKA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="+" PGL_start="51833" PGL_stop="54011"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="51833" e_stop="52342"/>
            <exon e_start="52438" e_stop="52573"/>
            <exon e_start="52671" e_stop="52807"/>
            <exon e_start="52893" e_stop="53016"/>
            <exon e_start="53130" e_stop="54011"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.975" acc_prob="0.964" e_score="1.000"/>
          <exon-intron don_prob="0.990" acc_prob="0.922" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.901" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.998" e_score="1.000"/>
          <exon-only e_score="0.995"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="51833" e_stop="52342" e_length="510"/>
          </exon>
          <intron i_serial="1" don_prob="0.975" acc_prob="0.964">
            <gDNA_intron_boundary i_start="52343" i_stop="52437" i_length="95"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="52438" e_stop="52573" e_length="136"/>
          </exon>
          <intron i_serial="2" don_prob="0.990" acc_prob="0.922">
            <gDNA_intron_boundary i_start="52574" i_stop="52670" i_length="97"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="52671" e_stop="52807" e_length="137"/>
          </exon>
          <intron i_serial="3" don_prob="0.996" acc_prob="0.901">
            <gDNA_intron_boundary i_start="52808" i_stop="52892" i_length="85"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="52893" e_stop="53016" e_length="124"/>
          </exon>
          <intron i_serial="4" don_prob="0.999" acc_prob="0.998">
            <gDNA_intron_boundary i_start="53017" i_stop="53129" i_length="113"/>
          </intron>
          <exon e_serial="5" e_score="0.995">
            <gDNA_exon_boundary e_start="53130" e_stop="54011" e_length="882"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="51833" stop="52342"/>
              <exon start="52438" stop="52573"/>
              <exon start="52671" stop="52807"/>
              <exon start="52893" stop="53016"/>
              <exon start="53130" stop="54011"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U320278" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAACTCATTTCCCTGTTTGGTTTCATTGACACATTTTGTTCAACACCTTGTAAGCAATAAAAATTGACACCAAACTGATCAAATTTCATCGGATTTAGTATAACAGCTATGGCTACTTGCGGAATTGACTGGAAATCTGTTCTGCCAAACTGTTTTAAGGGCAATAATGTTCGTTCGGAGGCGAAGGTGATGGAGAACAGTAAACAGATGAATTCTGATCATCATAGATTAGCTTTTTCTGATATAAGTACTGATTCTAGATCAGTACTTATATCATTGGATGACCTTTCATCGAACGCTGTCATTGGTTCAAATCTTCATGTATTCACATATGAGGAACTTAAACTCATCACTAGTGATTTCTCCTCAGCTAATTTTCTCGGTAAAGGTGGATTTGGACCCGTTCACAAGGGGTTTATTGATGACAAGATTAAGCCTGGTTTGGATGCTCAACCTGTTGCTGTTAAATTGCTTGATTTGGATGGAAATCAGGGCCATCAAGAATGGCTG : ACTGAAGTGGTTTTTTTGGGGCAATTGAGGCATCATCATCTAGTGAAGTTGATTGGATATTGTTGGGAGGAGGAGCAGAGACTTCTCGTTTACGAGTATATGGCAAGGGGAAACCTCGAGGATCAACTATTTTCGA : GATATTCGAGTTGTTTGCCATGGTTGACCAGAATAAAAATTATGGTTGGTGCTGCAAAGGGACTGGCTTTCCTTCACGGAGAAGAAAAACCAGTAATCTACCGCGATTTTAAGGCTTCTAACATCCTCTTAGACTCG : GATTACAGAGCCAAACTATCTGATTTTGGGCTAGCAAAGGATGGACCGGAAGGCGATGACACACATGTCTCAACTCGTGTGATGGGCACTCATGGTTATGCTGCTCCGGAGTACATCATGACTG : GTCATTTGACAAGCAAGAGCGATGTGTACAGCTTCGGAGTAGTTTTGTTAGAACTTATAACAGGACGACGAGCCATGGACAAGAAACGCCCCCTCAAAGAGCGAATCTTGGTGGATTGGGCAAGACCAATGCTAAGGGATCCACACAAGCTTGACAGAATAATGGACCCACGGCTTGAAGGTCAGTACTCGACACAAGGAGCCAAGAAGGTAGCTGCATTGGCTTATCAATGCTTAAGCCACCACCCCAGGTCTAGGCCTACTATGAGCAACATAGTGAAGATCTTGGAACCAGTCTTGGACATGAAGGATATACCAATGGGCCCATTTGTTTACGTCGTTCCCTCCTCAAAACCTGACAAGGGAACAGAAATTGGTGAATTGAAGACTAAAGTGAACGATGAAAACAAGGCGGGTGTAAGGGAAAACGAAGTAGATAATGCAGGGGAAAACAGAGAGGATGGTAATGCTAAGCAACGGAGAGTCGGACACAGGTATAAACACAGGCTAAAGACTGATGCTTCTGTTTACTCAGATACTCATTTGTATCACAAAACTGTAAAGCATGAAAGAACAAACAAACTAAATTCTTATTGATCAATCGCAACGAATAGAAGAAAGGGAAAAGAGATTTAAAATGTAAAACATATGTGAATTAGATAGTATAATTAAGTACTCCAATTGTATTTTTTTTTTTTTGTTAAATCAGTTTACATTTTAGTCTCAGTTTTGGGAGAAAAAAAAATCCTTTTAGTGTTTTCGTTTTTGTTGTTGAAAGCAATGTACATAGAAGATTCTTATGACTTTTATCAGTTGTAAAAAGTTGTTTGAACAAGAAAAAGTTATATATGAAAACGAAAAAGAATCATTCTTCTCTTCTCTT</gDNA_template>
            <first_frame> K  L  I  S  L  F  G  F  I  D  T  F  C  S  T  P  C  K  Q  *  K  L  T  P  N  *  S  N  F  I  G  F  S  I  T  A  M  A  T  C  G  I  D  W  K  S  V  L  P  N  C  F  K  G  N  N  V  R  S  E  A  K  V  M  E  N  S  K  Q  M  N  S  D  H  H  R  L  A  F  S  D  I  S  T  D  S  R  S  V  L  I  S  L  D  D  L  S  S  N  A  V  I  G  S  N  L  H  V  F  T  Y  E  E  L  K  L  I  T  S  D  F  S  S  A  N  F  L  G  K  G  G  F  G  P  V  H  K  G  F  I  D  D  K  I  K  P  G  L  D  A  Q  P  V  A  V  K  L  L  D  L  D  G  N  Q  G  H  Q  E  W  L  :  T  E  V  V  F  L  G  Q  L  R  H  H  H  L  V  K  L  I  G  Y  C  W  E  E  E  Q  R  L  L  V  Y  E  Y  M  A  R  G  N  L  E  D  Q  L  F  S   : R  Y  S  S  C  L  P  W  L  T  R  I  K  I  M  V  G  A  A  K  G  L  A  F  L  H  G  E  E  K  P  V  I  Y  R  D  F  K  A  S  N  I  L  L  D  S  :  D  Y  R  A  K  L  S  D  F  G  L  A  K  D  G  P  E  G  D  D  T  H  V  S  T  R  V  M  G  T  H  G  Y  A  A  P  E  Y  I  M  T   : G  H  L  T  S  K  S  D  V  Y  S  F  G  V  V  L  L  E  L  I  T  G  R  R  A  M  D  K  K  R  P  L  K  E  R  I  L  V  D  W  A  R  P  M  L  R  D  P  H  K  L  D  R  I  M  D  P  R  L  E  G  Q  Y  S  T  Q  G  A  K  K  V  A  A  L  A  Y  Q  C  L  S  H  H  P  R  S  R  P  T  M  S  N  I  V  K  I  L  E  P  V  L  D  M  K  D  I  P  M  G  P  F  V  Y  V  V  P  S  S  K  P  D  K  G  T  E  I  G  E  L  K  T  K  V  N  D  E  N  K  A  G  V  R  E  N  E  V  D  N  A  G  E  N  R  E  D  G  N  A  K  Q  R  R  V  G  H  R  Y  K  H  R  L  K  T  D  A  S  V  Y  S  D  T  H  L  Y  H  K  T  V  K  H  E  R  T  N  K  L  N  S  Y  *  S  I  A  T  N  R  R  K  G  K  E  I  *  N  V  K  H  M  *  I  R  *  Y  N  *  V  L  Q  L  Y  F  F  F  F  V  K  S  V  Y  I  L  V  S  V  L  G  E  K  K  I  L  L  V  F  S  F  L  L  L  K  A  M  Y  I  E  D  S  Y  D  F  Y  Q  L  *  K  V  V  *  T  R  K  S  Y  I  *  K  R  K  R  I  I  L  L  F  S  </first_frame>
            <second_frame>  N  S  F  P  C  L  V  S  L  T  H  F  V  Q  H  L  V  S  N  K  N  *  H  Q  T  D  Q  I  S  S  D  L  V  *  Q  L  W  L  L  A  E  L  T  G  N  L  F  C  Q  T  V  L  R  A  I  M  F  V  R  R  R  R  *  W  R  T  V  N  R  *  I  L  I  I  I  D  *  L  F  L  I  *  V  L  I  L  D  Q  Y  L  Y  H  W  M  T  F  H  R  T  L  S  L  V  Q  I  F  M  Y  S  H  M  R  N  L  N  S  S  L  V  I  S  P  Q  L  I  F  S  V  K  V  D  L  D  P  F  T  R  G  L  L  M  T  R  L  S  L  V  W  M  L  N  L  L  L  L  N  C  L  I  W  M  E  I  R  A  I  K  N  G  * :   L  K  W  F  F  W  G  N  *  G  I  I  I  *  *  S  *  L  D  I  V  G  R  R  S  R  D  F  S  F  T  S  I  W  Q  G  E  T  S  R  I  N  Y  F  R  :  D  I  R  V  V  C  H  G  *  P  E  *  K  L  W  L  V  L  Q  R  D  W  L  S  F  T  E  K  K  N  Q  *  S  T  A  I  L  R  L  L  T  S  S  *  T  R :   I  T  E  P  N  Y  L  I  L  G  *  Q  R  M  D  R  K  A  M  T  H  M  S  Q  L  V  *  W  A  L  M  V  M  L  L  R  S  T  S  *  L  :  V  I  *  Q  A  R  A  M  C  T  A  S  E  *  F  C  *  N  L  *  Q  D  D  E  P  W  T  R  N  A  P  S  K  S  E  S  W  W  I  G  Q  D  Q  C  *  G  I  H  T  S  L  T  E  *  W  T  H  G  L  K  V  S  T  R  H  K  E  P  R  R  *  L  H  W  L  I  N  A  *  A  T  T  P  G  L  G  L  L  *  A  T  *  *  R  S  W  N  Q  S  W  T  *  R  I  Y  Q  W  A  H  L  F  T  S  F  P  P  Q  N  L  T  R  E  Q  K  L  V  N  *  R  L  K  *  T  M  K  T  R  R  V  *  G  K  T  K  *  I  M  Q  G  K  T  E  R  M  V  M  L  S  N  G  E  S  D  T  G  I  N  T  G  *  R  L  M  L  L  F  T  Q  I  L  I  C  I  T  K  L  *  S  M  K  E  Q  T  N  *  I  L  I  D  Q  S  Q  R  I  E  E  R  E  K  R  F  K  M  *  N  I  C  E  L  D  S  I  I  K  Y  S  N  C  I  F  F  F  L  L  N  Q  F  T  F  *  S  Q  F  W  E  K  K  K  S  F  *  C  F  R  F  C  C  *  K  Q  C  T  *  K  I  L  M  T  F  I  S  C  K  K  L  F  E  Q  E  K  V  I  Y  E  N  E  K  E  S  F  F  S  S  L </second_frame>
            <third_frame>   T  H  F  P  V  W  F  H  *  H  I  L  F  N  T  L  *  A  I  K  I  D  T  K  L  I  K  F  H  R  I  *  Y  N  S  Y  G  Y  L  R  N  *  L  E  I  C  S  A  K  L  F  *  G  Q  *  C  S  F  G  G  E  G  D  G  E  Q  *  T  D  E  F  *  S  S  *  I  S  F  F  *  Y  K  Y  *  F  *  I  S  T  Y  I  I  G  *  P  F  I  E  R  C  H  W  F  K  S  S  C  I  H  I  *  G  T  *  T  H  H  *  *  F  L  L  S  *  F  S  R  *  R  W  I  W  T  R  S  Q  G  V  Y  *  *  Q  D  *  A  W  F  G  C  S  T  C  C  C  *  I  A  *  F  G  W  K  S  G  P  S  R  M  A   : D  *  S  G  F  F  G  A  I  E  A  S  S  S  S  E  V  D  W  I  L  L  G  G  G  A  E  T  S  R  L  R  V  Y  G  K  G  K  P  R  G  S  T  I  F  E :   I  F  E  L  F  A  M  V  D  Q  N  K  N  Y  G  W  C  C  K  G  T  G  F  P  S  R  R  R  K  T  S  N  L  P  R  F  *  G  F  *  H  P  L  R  L   : G  L  Q  S  Q  T  I  *  F  W  A  S  K  G  W  T  G  R  R  *  H  T  C  L  N  S  C  D  G  H  S  W  L  C  C  S  G  V  H  H  D  W :   S  F  D  K  Q  E  R  C  V  Q  L  R  S  S  F  V  R  T  Y  N  R  T  T  S  H  G  Q  E  T  P  P  Q  R  A  N  L  G  G  L  G  K  T  N  A  K  G  S  T  Q  A  *  Q  N  N  G  P  T  A  *  R  S  V  L  D  T  R  S  Q  E  G  S  C  I  G  L  S  M  L  K  P  P  P  Q  V  *  A  Y  Y  E  Q  H  S  E  D  L  G  T  S  L  G  H  E  G  Y  T  N  G  P  I  C  L  R  R  S  L  L  K  T  *  Q  G  N  R  N  W  *  I  E  D  *  S  E  R  *  K  Q  G  G  C  K  G  K  R  S  R  *  C  R  G  K  Q  R  G  W  *  C  *  A  T  E  S  R  T  Q  V  *  T  Q  A  K  D  *  C  F  C  L  L  R  Y  S  F  V  S  Q  N  C  K  A  *  K  N  K  Q  T  K  F  L  L  I  N  R  N  E  *  K  K  G  K  R  D  L  K  C  K  T  Y  V  N  *  I  V  *  L  S  T  P  I  V  F  F  F  F  C  *  I  S  L  H  F  S  L  S  F  G  R  K  K  N  P  F  S  V  F  V  F  V  V  E  S  N  V  H  R  R  F  L  *  L  L  S  V  V  K  S  C  L  N  K  K  K  L  Y  M  K  T  K  K  N  H  S  S  L  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06SLe0093P23.1" strand="+"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="51911" stop="52342"/>
                    <exon start="52438" stop="52573"/>
                    <exon start="52671" stop="52807"/>
                    <exon start="52893" stop="53016"/>
                    <exon start="53130" stop="53725"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1422</number_coding_nucleotides>
                  <number_encoded_amino_acids>474</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SNFIGFSITAMATCGIDWKSVLPNCFKGNNVRSEAKVMENSKQMNSDHHRLAFSDISTDSRSVLISLDDLSSNAVIGSNLHVFTYEELKLITSDFSSANFLGKGGFGPVHKGFIDDKIKPGLDAQPVAVKLLDLDGNQGHQEWLTEVVFLGQLRHHHLVKLIGYCWEEEQRLLVYEYMARGNLEDQLFSRYSSCLPWLTRIKIMVGAAKGLAFLHGEEKPVIYRDFKASNILLDSDYRAKLSDFGLAKDGPEGDDTHVSTRVMGTHGYAAPEYIMTGHLTSKSDVYSFGVVLLELITGRRAMDKKRPLKERILVDWARPMLRDPHKLDRIMDPRLEGQYSTQGAKKVAALAYQCLSHHPRSRPTMSNIVKILEPVLDMKDIPMGPFVYVVPSSKPDKGTEIGELKTKVNDENKAGVRENEVDNAGENREDGNAKQRRVGHRYKHRLKTDASVYSDTHLYHKTVKHERTNKLNSY*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="-" PGL_start="57823" PGL_stop="57402"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="57823" e_stop="57402"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.962"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.962">
            <gDNA_exon_boundary e_start="57823" e_stop="57402" e_length="422"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="57823" stop="57402"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U330617" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CTTTTCCGGCGAGTGAAATTGCGGTGGCTGAAGTCGCAGTACACGTGTTTGCTGAAAAAAATGAGAGAATATTATCAATCTGCTGTGAAGGATATAATGGAAAATGGCGGAGCATTGGATTCGTTTCAGCAGCGTTTACTATTGGAGACTTCTTTTGCTGTTCCGGTGATGGGCCTTTCCTTCAATACTTTTCCAAATCATTATGGCACTTGAAGTTTTTTTTTTTGATGTTTTTTTTACTTGGAAAAACTTATTATTATTGAAAATAATTGGAAAATAAATCCTCAACAATGCATCATTTTTTAAAATATTGAATAGATTCATTACATATTTCTCGGATCATTTTTATTTGTTCAGTATTTCTAAAATAAAGCTTTTCACTTTTAGCATATCAAAAAATAAATTATTATCTATTAAGTATT</gDNA_template>
            <first_frame> L  F  R  R  V  K  L  R  W  L  K  S  Q  Y  T  C  L  L  K  K  M  R  E  Y  Y  Q  S  A  V  K  D  I  M  E  N  G  G  A  L  D  S  F  Q  Q  R  L  L  L  E  T  S  F  A  V  P  V  M  G  L  S  F  N  T  F  P  N  H  Y  G  T  *  S  F  F  F  *  C  F  F  Y  L  E  K  L  I  I  I  E  N  N  W  K  I  N  P  Q  Q  C  I  I  F  *  N  I  E  *  I  H  Y  I  F  L  G  S  F  L  F  V  Q  Y  F  *  N  K  A  F  H  F  *  H  I  K  K  *  I  I  I  Y  *  V   </first_frame>
            <second_frame>  F  S  G  E  *  N  C  G  G  *  S  R  S  T  R  V  C  *  K  K  *  E  N  I  I  N  L  L  *  R  I  *  W  K  M  A  E  H  W  I  R  F  S  S  V  Y  Y  W  R  L  L  L  L  F  R  *  W  A  F  P  S  I  L  F  Q  I  I  M  A  L  E  V  F  F  F  D  V  F  F  T  W  K  N  L  L  L  L  K  I  I  G  K  *  I  L  N  N  A  S  F  F  K  I  L  N  R  F  I  T  Y  F  S  D  H  F  Y  L  F  S  I  S  K  I  K  L  F  T  F  S  I  S  K  N  K  L  L  S  I  K  Y  </second_frame>
            <third_frame>   F  P  A  S  E  I  A  V  A  E  V  A  V  H  V  F  A  E  K  N  E  R  I  L  S  I  C  C  E  G  Y  N  G  K  W  R  S  I  G  F  V  S  A  A  F  T  I  G  D  F  F  C  C  S  G  D  G  P  F  L  Q  Y  F  S  K  S  L  W  H  L  K  F  F  F  L  M  F  F  L  L  G  K  T  Y  Y  Y  *  K  *  L  E  N  K  S  S  T  M  H  H  F  L  K  Y  *  I  D  S  L  H  I  S  R  I  I  F  I  C  S  V  F  L  K  *  S  F  S  L  L  A  Y  Q  K  I  N  Y  Y  L  L  S  I </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06SLe0093P23.1" strand="-"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="57821" stop="57561"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>258</number_coding_nucleotides>
                  <number_encoded_amino_acids>86</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FPASEIAVAEVAVHVFAEKNERILSICCEGYNGKWRSIGFVSAAFTIGDFFCCSGDGPFLQYFSKSLWHLKFFFLMFFLLGKTYYY*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06SLe0093P23.1" strand="-"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="57823" stop="57611"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>210</number_coding_nucleotides>
                  <number_encoded_amino_acids>70</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LFRRVKLRWLKSQYTCLLKKMREYYQSAVKDIMENGGALDSFQQRLLLETSFAVPVMGLSFNTFPNHYGT*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="+" PGL_start="61129" PGL_stop="64295"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="61129" e_stop="61303"/>
            <exon e_start="61386" e_stop="61436"/>
            <exon e_start="61527" e_stop="61586"/>
            <exon e_start="63793" e_stop="63864"/>
            <exon e_start="63949" e_stop="64295"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.952" acc_prob="0.973" e_score="1.000"/>
          <exon-intron don_prob="0.203" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.954" acc_prob="0.997" e_score="1.000"/>
          <exon-only e_score="0.974"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="61129" e_stop="61303" e_length="175"/>
          </exon>
          <intron i_serial="1" don_prob="0.952" acc_prob="0.973">
            <gDNA_intron_boundary i_start="61304" i_stop="61385" i_length="82"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="61386" e_stop="61436" e_length="51"/>
          </exon>
          <intron i_serial="2" don_prob="0.203" acc_prob="1.000">
            <gDNA_intron_boundary i_start="61437" i_stop="61526" i_length="90"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="61527" e_stop="61586" e_length="60"/>
          </exon>
          <intron i_serial="3" don_prob="0.996" acc_prob="0.996">
            <gDNA_intron_boundary i_start="61587" i_stop="63792" i_length="2206"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="63793" e_stop="63864" e_length="72"/>
          </exon>
          <intron i_serial="4" don_prob="0.954" acc_prob="0.997">
            <gDNA_intron_boundary i_start="63865" i_stop="63948" i_length="84"/>
          </intron>
          <exon e_serial="5" e_score="0.974">
            <gDNA_exon_boundary e_start="63949" e_stop="64295" e_length="347"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61129" stop="61303"/>
              <exon start="61386" stop="61436"/>
              <exon start="61527" stop="61586"/>
              <exon start="63793" stop="63864"/>
              <exon start="63949" stop="64295"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U321332" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="63847" stop="63864"/>
              <exon start="63949" stop="64144"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U337357" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GAATTTTGGATTCGTATTCTGTTGATTGATTTCTCAGCTATGTCTACAGACGTCGAGATGGCTGCCGCCGATGAAGGATCCACCGTTACCGCACCTCCATGCTGTTCTTCTTCTTCGAAGAAACCCAAGCGTTTTGAGATCAAAAAGTGGAACGCTGTCTCTTTATGGGCTTGGG : ATATTGTTGTAGACAACTGTGCTATTTGCAGGAACCATATCATGGATCTCT : GCATTGAATGTCAAGCTAATCAAGCTAGTGCTACTAGCGAGGAGTGCACTGTTGCCTGGG : GTGTATGTAATCATGCCTTCCACTTTCACTGCATCAGTCGGTGGCTCAAGACCCGTCAAGTGTGCCCATTAG : ATAACAGTGAGTGGGAGTTTCAGAAGTATGGTCACTAGAGGATCCAATACATTCATTGCAGTGGAAAAGATCATGCTGATGCACTGGAACCTTGAAACTCTTATTTTAGTTTTTTTTTTGTTTTGTATTATGGCAGTAAAAATCTGAGACTGCTTTCTATTGGGATGTGATTTATTAGAGTGTTGGCATTTAAATTGCAGATATGATGTTATTTTGAACTTCTATGTTACTGTTTTACTTCAAATGTCAAACTGTGTTGCTAGTTGATTATGTTGTTTGTTAACCCTATGTTGGTGACAAATTCTAATACTAGTATAAAGTTATCTTCGTATATATAGAAAAGCTGT</gDNA_template>
            <first_frame> E  F  W  I  R  I  L  L  I  D  F  S  A  M  S  T  D  V  E  M  A  A  A  D  E  G  S  T  V  T  A  P  P  C  C  S  S  S  S  K  K  P  K  R  F  E  I  K  K  W  N  A  V  S  L  W  A  W   : D  I  V  V  D  N  C  A  I  C  R  N  H  I  M  D  L   : C  I  E  C  Q  A  N  Q  A  S  A  T  S  E  E  C  T  V  A  W   : G  V  C  N  H  A  F  H  F  H  C  I  S  R  W  L  K  T  R  Q  V  C  P  L   : D  N  S  E  W  E  F  Q  K  Y  G  H  *  R  I  Q  Y  I  H  C  S  G  K  D  H  A  D  A  L  E  P  *  N  S  Y  F  S  F  F  F  V  L  Y  Y  G  S  K  N  L  R  L  L  S  I  G  M  *  F  I  R  V  L  A  F  K  L  Q  I  *  C  Y  F  E  L  L  C  Y  C  F  T  S  N  V  K  L  C  C  *  L  I  M  L  F  V  N  P  M  L  V  T  N  S  N  T  S  I  K  L  S  S  Y  I  *  K  S  C </first_frame>
            <second_frame>  N  F  G  F  V  F  C  *  L  I  S  Q  L  C  L  Q  T  S  R  W  L  P  P  M  K  D  P  P  L  P  H  L  H  A  V  L  L  L  R  R  N  P  S  V  L  R  S  K  S  G  T  L  S  L  Y  G  L  G  :  I  L  L  *  T  T  V  L  F  A  G  T  I  S  W  I  S  :  A  L  N  V  K  L  I  K  L  V  L  L  A  R  S  A  L  L  P  G  :  V  Y  V  I  M  P  S  T  F  T  A  S  V  G  G  S  R  P  V  K  C  A  H  *  :  I  T  V  S  G  S  F  R  S  M  V  T  R  G  S  N  T  F  I  A  V  E  K  I  M  L  M  H  W  N  L  E  T  L  I  L  V  F  F  L  F  C  I  M  A  V  K  I  *  D  C  F  L  L  G  C  D  L  L  E  C  W  H  L  N  C  R  Y  D  V  I  L  N  F  Y  V  T  V  L  L  Q  M  S  N  C  V  A  S  *  L  C  C  L  L  T  L  C  W  *  Q  I  L  I  L  V  *  S  Y  L  R  I  Y  R  K  A   </second_frame>
            <third_frame>   I  L  D  S  Y  S  V  D  *  F  L  S  Y  V  Y  R  R  R  D  G  C  R  R  *  R  I  H  R  Y  R  T  S  M  L  F  F  F  F  E  E  T  Q  A  F  *  D  Q  K  V  E  R  C  L  F  M  G  L  G :   Y  C  C  R  Q  L  C  Y  L  Q  E  P  Y  H  G  S  L :   H  *  M  S  S  *  S  S  *  C  Y  *  R  G  V  H  C  C  L  G :   C  M  *  S  C  L  P  L  S  L  H  Q  S  V  A  Q  D  P  S  S  V  P  I  R :   *  Q  *  V  G  V  S  E  V  W  S  L  E  D  P  I  H  S  L  Q  W  K  R  S  C  *  C  T  G  T  L  K  L  L  F  *  F  F  F  C  F  V  L  W  Q  *  K  S  E  T  A  F  Y  W  D  V  I  Y  *  S  V  G  I  *  I  A  D  M  M  L  F  *  T  S  M  L  L  F  Y  F  K  C  Q  T  V  L  L  V  D  Y  V  V  C  *  P  Y  V  G  D  K  F  *  Y  *  Y  K  V  I  F  V  Y  I  E  K  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06SLe0093P23.1" strand="+"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="61129" stop="61303"/>
                    <exon start="61386" stop="61436"/>
                    <exon start="61527" stop="61586"/>
                    <exon start="63793" stop="63864"/>
                    <exon start="63949" stop="63986"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>393</number_coding_nucleotides>
                  <number_encoded_amino_acids>131</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EFWIRILLIDFSAMSTDVEMAAADEGSTVTAPPCCSSSSKKPKRFEIKKWNAVSLWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="-" PGL_start="67424" PGL_stop="64047"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="67424" e_stop="64572"/>
            <exon e_start="64077" e_stop="64047"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.998"/>
          <exon-only e_score="0.774"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="67424" e_stop="64572" e_length="2853"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="64571" i_stop="64078" i_length="494"/>
          </intron>
          <exon e_serial="2" e_score="0.774">
            <gDNA_exon_boundary e_start="64077" e_stop="64047" e_length="31"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="67424" stop="64572"/>
              <exon start="64077" stop="64047"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U318298" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTAAGATACCCAAAACTTTATTTATGAGTTCTACCTTTAACTTTTTAAATTCGAACTATGTCATATAAATTAGCTATCGAGAAATTATGAATAAGCACCTAGCCCATATTTTGTTCTTAGGGGCATTTGTTAATCCATTATAAAAATATCTAGGTGGGTATGCTAAATTAATGGAAAGTAAATCAATCAGCACCTTCAACGTGGCCCAATAAGGCCCAACCAATTGGCTACTTCCGCTTCTCTTTATATCTCATATACCGGCGGCATTTCGCCGATAACTTTTTTCCTCCGGTAAACGGTCAACGATGGCGGAAATCTCCGTTCTTTCTATTTTATTCATCCTCTCTTTCTGCCTTGCTCCGGTGACCATTTCCGTCCAATCGGATGACCATGAAACTTTCATCATTCACGTAGCCAAATCCCACAAGCCTCATGTTTTTTCCACCCATCACCATTGGTATTCCTCCATCGTCCGATCTGTTTCTCCGTCCTCTCACCACCCTTCTAAAATCCTCTATACCTATGAACGAGCCGCCGTGGGTTTCTCCGCCCGTCTGACCGCTGGGCAGGCTGATCAGCTCCGCCGTGTTCCTGGGGTAATCTCTGTCATTCCTGACCAAGTACGGTATCCCCACACCACCCATACACCTACCTTCTTAAAACTTGCCGACTCATTCGGCCTCTGGCCTGACTCTGACTACGCCGATGATGTTATTGTTGGTGTTCTGGATACGGGTATTTGGCCGGAAAGACCGAGTTTTTCCGATGAGGGATTATCTCCTGTTCCTGCAGGTTGGAAAGGGAAGTGTGTGACTGGACCGGGTTTTCCCAGAAGTTCATGTAATCGGAAAATTATTGGTGCTCGGATGTTTTACAAAGGGTATGAAGCTTCACAGGGTCCAATGGACGAATCAAAAGAAGCGAAATCACCGAGAGATACTGAAGGTCATGGAACACATACTGCTTCAACTGCAGCTGGTTCTTTGGTAGCAAATGCTAGTTTTTACCAATATGCTAAAGGTGAAGCTAGAGGAATGGCGATTAAAGCTAGAATAGCTGCTTACAAGATTTGTTGGAAAACCGGTTGTTTTGATTCCGATATACTGGCTGCCATGGATCAAGCTGTTGATGATGGTGTCCATGTGATTTCACTTTCCGTCGGAGCTAACGGATATGCTCCACATTACCTCCATGACTCCATTGCAATCGGAGCTTTTGGTGCCTCCGAACATGGGGTCCTCGTCTCATGCTCAGCTGGAAATTCCGGTCCTGGCCCTTACACAGCTGTGAACATTGCCCCGTGGATCCTCACCGTTGGTGCGTCAACCATAGACCGAGAGTTTCCAGCTGATGTTATTCTAGGAGATGATAGAGTATTTGGTGGCGTTTCCTTATACGCCGGCAATCCGTTAAACGATTCCAAATTACCCGTGGTTTATTCCGGTGATTGTGGTAGCAAATACTGTTATCCAGGAAAGCTGGACCATAAAAAAGTCGCCGGTAAAATTGTCCTCTGCGACAGGGGAGGCAACGCTAGAGTTGAAAAAGGAAGTGCAGTGAAGCTAGCTGGTGGGGTAGGAATGATACTCGCTAACTTAGCTGATTCCGGTGAAGAACTCGTTGCAGATTCACATCTTCTCCCGGCGACAATGGTAGGTCAAAAAGCCGGAGACGAAATAAGAGAATACGTCATCTCTGATCCATCACCAACGGCTACAATCGTATTCAAAGGAACCGTGATCGGAAATTCACCAGCGGCGCCGCGTGTGGCGGCGTTCTCAAGCCGTGGACCGAATCATTTAACGCCGGAGATTCTTAAACCGGATGTTACTGCACCCGGAGTTAACATTTTAGCCGGTTGGACCGGAGCTAACGGTCCAACCGATTTAGAAATTGACCCGAGAAGAGTGGAATTTAATATTATTTCAGGGACTTCCATGTCGTGTCCTCACGTTAGTGGATTAGCTGCTTTACTTAGAAGGGCCCACTCAAAGTGGACCCCAGCAGCCATCAAATCAGCACTCATGACAACAGCTTATAATTTGGACAATTCAGGTAAGATATTTACTGATCTTGCCACTGGTGAAGAATCCACACCTTTTGTTCATGGATCCGGGCATGTGGATCCGAACCGAGCATTGAATCCGGGTTTGGTGTACGATATTGAAACCAGTGACTACGTGAACTTCCTATGCACTATTGGCTATGATGGCGACGATATCGCGGTGTTCGTGAGGGATTCTTCTCGGGTGAATTGTAGTGAACGGAGTTTGGCTACTCCGGGAGACCTGAATTACCCGTCATTTGCAGTTGATTTTACCAGTGATAGTAACGGTGTGGTGAAATACAAGCGTGTGGTGAAGAACGTAGGGGGGAATCCAAATGCTGTTTATGAAGTGAAGGTGAACGCACCTTTAGGTGTGGAAGTGAGTGTGTCACCGGCGAAGCTTGTTTTCAGTGAGGAAAATAATAGTTTGTCCTATGAGATTAGCTTTACGAGTAAAAGAAGTGAAGATAATATTATGGTGAAGGGGACTCCATCTGCGTTTGGATCGATTGAATGGAGTGATGGGATTCACAGTGTGAGAAGTCCAATCGCAGTGCGTTGGCGATACCAATCTGCTGTGTCCATGTGAGTAGTTGGATCGTTGTGACTGAGGGAAGACAAATAAATTGGACTGATGGCAAACTGGAAGAGGAAAATACCATTGAAGTTTCATTTGGTTTCACTTTCTTTAAACTTTATTTTTTTTTCTTGTTTTTCAGATTGATGTATATATGAATGAAGCATGTCGAATTGTTCCAGAGTTCCAAGCCTAGATCTTGACTTCATTAAGTACATTAACAAATTAT : AATACAAAACAAAAAAAAAACTAAAATAAGA</gDNA_template>
            <first_frame> L  R  Y  P  K  L  Y  L  *  V  L  P  L  T  F  *  I  R  T  M  S  Y  K  L  A  I  E  K  L  *  I  S  T  *  P  I  F  C  S  *  G  H  L  L  I  H  Y  K  N  I  *  V  G  M  L  N  *  W  K  V  N  Q  S  A  P  S  T  W  P  N  K  A  Q  P  I  G  Y  F  R  F  S  L  Y  L  I  Y  R  R  H  F  A  D  N  F  F  P  P  V  N  G  Q  R  W  R  K  S  P  F  F  L  F  Y  S  S  S  L  S  A  L  L  R  *  P  F  P  S  N  R  M  T  M  K  L  S  S  F  T  *  P  N  P  T  S  L  M  F  F  P  P  I  T  I  G  I  P  P  S  S  D  L  F  L  R  P  L  T  T  L  L  K  S  S  I  P  M  N  E  P  P  W  V  S  P  P  V  *  P  L  G  R  L  I  S  S  A  V  F  L  G  *  S  L  S  F  L  T  K  Y  G  I  P  T  P  P  I  H  L  P  S  *  N  L  P  T  H  S  A  S  G  L  T  L  T  T  P  M  M  L  L  L  V  F  W  I  R  V  F  G  R  K  D  R  V  F  P  M  R  D  Y  L  L  F  L  Q  V  G  K  G  S  V  *  L  D  R  V  F  P  E  V  H  V  I  G  K  L  L  V  L  G  C  F  T  K  G  M  K  L  H  R  V  Q  W  T  N  Q  K  K  R  N  H  R  E  I  L  K  V  M  E  H  I  L  L  Q  L  Q  L  V  L  W  *  Q  M  L  V  F  T  N  M  L  K  V  K  L  E  E  W  R  L  K  L  E  *  L  L  T  R  F  V  G  K  P  V  V  L  I  P  I  Y  W  L  P  W  I  K  L  L  M  M  V  S  M  *  F  H  F  P  S  E  L  T  D  M  L  H  I  T  S  M  T  P  L  Q  S  E  L  L  V  P  P  N  M  G  S  S  S  H  A  Q  L  E  I  P  V  L  A  L  T  Q  L  *  T  L  P  R  G  S  S  P  L  V  R  Q  P  *  T  E  S  F  Q  L  M  L  F  *  E  M  I  E  Y  L  V  A  F  P  Y  T  P  A  I  R  *  T  I  P  N  Y  P  W  F  I  P  V  I  V  V  A  N  T  V  I  Q  E  S  W  T  I  K  K  S  P  V  K  L  S  S  A  T  G  E  A  T  L  E  L  K  K  E  V  Q  *  S  *  L  V  G  *  E  *  Y  S  L  T  *  L  I  P  V  K  N  S  L  Q  I  H  I  F  S  R  R  Q  W  *  V  K  K  P  E  T  K  *  E  N  T  S  S  L  I  H  H  Q  R  L  Q  S  Y  S  K  E  P  *  S  E  I  H  Q  R  R  R  V  W  R  R  S  Q  A  V  D  R  I  I  *  R  R  R  F  L  N  R  M  L  L  H  P  E  L  T  F  *  P  V  G  P  E  L  T  V  Q  P  I  *  K  L  T  R  E  E  W  N  L  I  L  F  Q  G  L  P  C  R  V  L  T  L  V  D  *  L  L  Y  L  E  G  P  T  Q  S  G  P  Q  Q  P  S  N  Q  H  S  *  Q  Q  L  I  I  W  T  I  Q  V  R  Y  L  L  I  L  P  L  V  K  N  P  H  L  L  F  M  D  P  G  M  W  I  R  T  E  H  *  I  R  V  W  C  T  I  L  K  P  V  T  T  *  T  S  Y  A  L  L  A  M  M  A  T  I  S  R  C  S  *  G  I  L  L  G  *  I  V  V  N  G  V  W  L  L  R  E  T  *  I  T  R  H  L  Q  L  I  L  P  V  I  V  T  V  W  *  N  T  S  V  W  *  R  T  *  G  G  I  Q  M  L  F  M  K  *  R  *  T  H  L  *  V  W  K  *  V  C  H  R  R  S  L  F  S  V  R  K  I  I  V  C  P  M  R  L  A  L  R  V  K  E  V  K  I  I  L  W  *  R  G  L  H  L  R  L  D  R  L  N  G  V  M  G  F  T  V  *  E  V  Q  S  Q  C  V  G  D  T  N  L  L  C  P  C  E  *  L  D  R  C  D  *  G  K  T  N  K  L  D  *  W  Q  T  G  R  G  K  Y  H  *  S  F  I  W  F  H  F  L  *  T  L  F  F  F  L  V  F  Q  I  D  V  Y  M  N  E  A  C  R  I  V  P  E  F  Q  A  *  I  L  T  S  L  S  T  L  T  N  Y  :  N  T  K  Q  K  K  N  *  N  K  </first_frame>
            <second_frame>  *  D  T  Q  N  F  I  Y  E  F  Y  L  *  L  F  K  F  E  L  C  H  I  N  *  L  S  R  N  Y  E  *  A  P  S  P  Y  F  V  L  R  G  I  C  *  S  I  I  K  I  S  R  W  V  C  *  I  N  G  K  *  I  N  Q  H  L  Q  R  G  P  I  R  P  N  Q  L  A  T  S  A  S  L  Y  I  S  Y  T  G  G  I  S  P  I  T  F  F  L  R  *  T  V  N  D  G  G  N  L  R  S  F  Y  F  I  H  P  L  F  L  P  C  S  G  D  H  F  R  P  I  G  *  P  *  N  F  H  H  S  R  S  Q  I  P  Q  A  S  C  F  F  H  P  S  P  L  V  F  L  H  R  P  I  C  F  S  V  L  S  P  P  F  *  N  P  L  Y  L  *  T  S  R  R  G  F  L  R  P  S  D  R  W  A  G  *  S  A  P  P  C  S  W  G  N  L  C  H  S  *  P  S  T  V  S  P  H  H  P  Y  T  Y  L  L  K  T  C  R  L  I  R  P  L  A  *  L  *  L  R  R  *  C  Y  C  W  C  S  G  Y  G  Y  L  A  G  K  T  E  F  F  R  *  G  I  I  S  C  S  C  R  L  E  R  E  V  C  D  W  T  G  F  S  Q  K  F  M  *  S  E  N  Y  W  C  S  D  V  L  Q  R  V  *  S  F  T  G  S  N  G  R  I  K  R  S  E  I  T  E  R  Y  *  R  S  W  N  T  Y  C  F  N  C  S  W  F  F  G  S  K  C  *  F  L  P  I  C  *  R  *  S  *  R  N  G  D  *  S  *  N  S  C  L  Q  D  L  L  E  N  R  L  F  *  F  R  Y  T  G  C  H  G  S  S  C  *  *  W  C  P  C  D  F  T  F  R  R  S  *  R  I  C  S  T  L  P  P  *  L  H  C  N  R  S  F  W  C  L  R  T  W  G  P  R  L  M  L  S  W  K  F  R  S  W  P  L  H  S  C  E  H  C  P  V  D  P  H  R  W  C  V  N  H  R  P  R  V  S  S  *  C  Y  S  R  R  *  *  S  I  W  W  R  F  L  I  R  R  Q  S  V  K  R  F  Q  I  T  R  G  L  F  R  *  L  W  *  Q  I  L  L  S  R  K  A  G  P  *  K  S  R  R  *  N  C  P  L  R  Q  G  R  Q  R  *  S  *  K  R  K  C  S  E  A  S  W  W  G  R  N  D  T  R  *  L  S  *  F  R  *  R  T  R  C  R  F  T  S  S  P  G  D  N  G  R  S  K  S  R  R  R  N  K  R  I  R  H  L  *  S  I  T  N  G  Y  N  R  I  Q  R  N  R  D  R  K  F  T  S  G  A  A  C  G  G  V  L  K  P  W  T  E  S  F  N  A  G  D  S  *  T  G  C  Y  C  T  R  S  *  H  F  S  R  L  D  R  S  *  R  S  N  R  F  R  N  *  P  E  K  S  G  I  *  Y  Y  F  R  D  F  H  V  V  S  S  R  *  W  I  S  C  F  T  *  K  G  P  L  K  V  D  P  S  S  H  Q  I  S  T  H  D  N  S  L  *  F  G  Q  F  R  *  D  I  Y  *  S  C  H  W  *  R  I  H  T  F  C  S  W  I  R  A  C  G  S  E  P  S  I  E  S  G  F  G  V  R  Y  *  N  Q  *  L  R  E  L  P  M  H  Y  W  L  *  W  R  R  Y  R  G  V  R  E  G  F  F  S  G  E  L  *  *  T  E  F  G  Y  S  G  R  P  E  L  P  V  I  C  S  *  F  Y  Q  *  *  *  R  C  G  E  I  Q  A  C  G  E  E  R  R  G  E  S  K  C  C  L  *  S  E  G  E  R  T  F  R  C  G  S  E  C  V  T  G  E  A  C  F  Q  *  G  K  *  *  F  V  L  *  D  *  L  Y  E  *  K  K  *  R  *  Y  Y  G  E  G  D  S  I  C  V  W  I  D  *  M  E  *  W  D  S  Q  C  E  K  S  N  R  S  A  L  A  I  P  I  C  C  V  H  V  S  S  W  I  V  V  T  E  G  R  Q  I  N  W  T  D  G  K  L  E  E  E  N  T  I  E  V  S  F  G  F  T  F  F  K  L  Y  F  F  F  L  F  F  R  L  M  Y  I  *  M  K  H  V  E  L  F  Q  S  S  K  P  R  S  *  L  H  *  V  H  *  Q  I  I :   I  Q  N  K  K  K  T  K  I  R </second_frame>
            <third_frame>   K  I  P  K  T  L  F  M  S  S  T  F  N  F  L  N  S  N  Y  V  I  *  I  S  Y  R  E  I  M  N  K  H  L  A  H  I  L  F  L  G  A  F  V  N  P  L  *  K  Y  L  G  G  Y  A  K  L  M  E  S  K  S  I  S  T  F  N  V  A  Q  *  G  P  T  N  W  L  L  P  L  L  F  I  S  H  I  P  A  A  F  R  R  *  L  F  S  S  G  K  R  S  T  M  A  E  I  S  V  L  S  I  L  F  I  L  S  F  C  L  A  P  V  T  I  S  V  Q  S  D  D  H  E  T  F  I  I  H  V  A  K  S  H  K  P  H  V  F  S  T  H  H  H  W  Y  S  S  I  V  R  S  V  S  P  S  S  H  H  P  S  K  I  L  Y  T  Y  E  R  A  A  V  G  F  S  A  R  L  T  A  G  Q  A  D  Q  L  R  R  V  P  G  V  I  S  V  I  P  D  Q  V  R  Y  P  H  T  T  H  T  P  T  F  L  K  L  A  D  S  F  G  L  W  P  D  S  D  Y  A  D  D  V  I  V  G  V  L  D  T  G  I  W  P  E  R  P  S  F  S  D  E  G  L  S  P  V  P  A  G  W  K  G  K  C  V  T  G  P  G  F  P  R  S  S  C  N  R  K  I  I  G  A  R  M  F  Y  K  G  Y  E  A  S  Q  G  P  M  D  E  S  K  E  A  K  S  P  R  D  T  E  G  H  G  T  H  T  A  S  T  A  A  G  S  L  V  A  N  A  S  F  Y  Q  Y  A  K  G  E  A  R  G  M  A  I  K  A  R  I  A  A  Y  K  I  C  W  K  T  G  C  F  D  S  D  I  L  A  A  M  D  Q  A  V  D  D  G  V  H  V  I  S  L  S  V  G  A  N  G  Y  A  P  H  Y  L  H  D  S  I  A  I  G  A  F  G  A  S  E  H  G  V  L  V  S  C  S  A  G  N  S  G  P  G  P  Y  T  A  V  N  I  A  P  W  I  L  T  V  G  A  S  T  I  D  R  E  F  P  A  D  V  I  L  G  D  D  R  V  F  G  G  V  S  L  Y  A  G  N  P  L  N  D  S  K  L  P  V  V  Y  S  G  D  C  G  S  K  Y  C  Y  P  G  K  L  D  H  K  K  V  A  G  K  I  V  L  C  D  R  G  G  N  A  R  V  E  K  G  S  A  V  K  L  A  G  G  V  G  M  I  L  A  N  L  A  D  S  G  E  E  L  V  A  D  S  H  L  L  P  A  T  M  V  G  Q  K  A  G  D  E  I  R  E  Y  V  I  S  D  P  S  P  T  A  T  I  V  F  K  G  T  V  I  G  N  S  P  A  A  P  R  V  A  A  F  S  S  R  G  P  N  H  L  T  P  E  I  L  K  P  D  V  T  A  P  G  V  N  I  L  A  G  W  T  G  A  N  G  P  T  D  L  E  I  D  P  R  R  V  E  F  N  I  I  S  G  T  S  M  S  C  P  H  V  S  G  L  A  A  L  L  R  R  A  H  S  K  W  T  P  A  A  I  K  S  A  L  M  T  T  A  Y  N  L  D  N  S  G  K  I  F  T  D  L  A  T  G  E  E  S  T  P  F  V  H  G  S  G  H  V  D  P  N  R  A  L  N  P  G  L  V  Y  D  I  E  T  S  D  Y  V  N  F  L  C  T  I  G  Y  D  G  D  D  I  A  V  F  V  R  D  S  S  R  V  N  C  S  E  R  S  L  A  T  P  G  D  L  N  Y  P  S  F  A  V  D  F  T  S  D  S  N  G  V  V  K  Y  K  R  V  V  K  N  V  G  G  N  P  N  A  V  Y  E  V  K  V  N  A  P  L  G  V  E  V  S  V  S  P  A  K  L  V  F  S  E  E  N  N  S  L  S  Y  E  I  S  F  T  S  K  R  S  E  D  N  I  M  V  K  G  T  P  S  A  F  G  S  I  E  W  S  D  G  I  H  S  V  R  S  P  I  A  V  R  W  R  Y  Q  S  A  V  S  M  *  V  V  G  S  L  *  L  R  E  D  K  *  I  G  L  M  A  N  W  K  R  K  I  P  L  K  F  H  L  V  S  L  S  L  N  F  I  F  F  S  C  F  S  D  *  C  I  Y  E  *  S  M  S  N  C  S  R  V  P  S  L  D  L  D  F  I  K  Y  I  N  K  L   : *  Y  K  T  K  K  K  L  K  *   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06SLe0093P23.1" strand="-"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="67146" stop="64789"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>2355</number_coding_nucleotides>
                  <number_encoded_amino_acids>785</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LFSSGKRSTMAEISVLSILFILSFCLAPVTISVQSDDHETFIIHVAKSHKPHVFSTHHHWYSSIVRSVSPSSHHPSKILYTYERAAVGFSARLTAGQADQLRRVPGVISVIPDQVRYPHTTHTPTFLKLADSFGLWPDSDYADDVIVGVLDTGIWPERPSFSDEGLSPVPAGWKGKCVTGPGFPRSSCNRKIIGARMFYKGYEASQGPMDESKEAKSPRDTEGHGTHTASTAAGSLVANASFYQYAKGEARGMAIKARIAAYKICWKTGCFDSDILAAMDQAVDDGVHVISLSVGANGYAPHYLHDSIAIGAFGASEHGVLVSCSAGNSGPGPYTAVNIAPWILTVGASTIDREFPADVILGDDRVFGGVSLYAGNPLNDSKLPVVYSGDCGSKYCYPGKLDHKKVAGKIVLCDRGGNARVEKGSAVKLAGGVGMILANLADSGEELVADSHLLPATMVGQKAGDEIREYVISDPSPTATIVFKGTVIGNSPAAPRVAAFSSRGPNHLTPEILKPDVTAPGVNILAGWTGANGPTDLEIDPRRVEFNIISGTSMSCPHVSGLAALLRRAHSKWTPAAIKSALMTTAYNLDNSGKIFTDLATGEESTPFVHGSGHVDPNRALNPGLVYDIETSDYVNFLCTIGYDGDDIAVFVRDSSRVNCSERSLATPGDLNYPSFAVDFTSDSNGVVKYKRVVKNVGGNPNAVYEVKVNAPLGVEVSVSPAKLVFSEENNSLSYEISFTSKRSEDNIMVKGTPSAFGSIEWSDGIHSVRSPIAVRWRYQSAVSM*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="-" PGL_start="73139" PGL_stop="70751"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="73139" e_stop="72826"/>
            <exon e_start="72715" e_stop="71990"/>
            <exon e_start="70783" e_stop="70751"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.809" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="1.000"/>
          <exon-only e_score="0.667"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="73139" e_stop="72826" e_length="314"/>
          </exon>
          <intron i_serial="1" don_prob="0.809" acc_prob="0.998">
            <gDNA_intron_boundary i_start="72825" i_stop="72716" i_length="110"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="72715" e_stop="71990" e_length="726"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="71989" i_stop="70784" i_length="1206"/>
          </intron>
          <exon e_serial="3" e_score="0.667">
            <gDNA_exon_boundary e_start="70783" e_stop="70751" e_length="33"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="73139" stop="72826"/>
              <exon start="72715" stop="71990"/>
              <exon start="70783" stop="70751"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U326178" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GGAGCACACAAATTAAATAAAACTATCATTTTTGTCTCTATCTATCTCGTTTGATATCAATCTATGTATTAAATTCATTGATAAACTCTGTTTTTCTTGTTTCTATTGAGATTTGAGATAGAGGAAGTGTTGAAATTTTCGTAATTTTTTTCTTTATGGATACGTATATTGTTCATGAGGTAAAAAGCGAGTGGGAGAAGGATTCGTTATAAGTTGAGTAAACATCAAATCTGATAAGAAGAAGAAAAAGCAATAATTATAATTTTTGCGAACTTCGCTGCATAAATTTACATCTTCATTTCCGTATTTGCTTG : ATTGACGAATAACGATGTCGATAATCAGTGAAACAGTTATGATGAAAGCGGCAGAAGCACAAACAGTTAAAGCAAAACTTACAGCGCCGATGGAGGTTGATTTCGCCAAATGCGAGTGCTGCGGATTGACGGAGGAATGTACTCTGTCGTATATAGAAACAATCCGGCAGCGGTACCAAGGGAATTGGATTTGTGGATTGTGTGCGGAGGCTATCAAGGACGAGGTGATTCGATGTGAGAGGTTGATTACTGCGGAAGAGGCATTGAATCGTCATCTCAATTTCTGTAAGAACTTCAGTTCGTCTCGTCCGCCATTGAATCCGACTGTTCATTTAATCGATGCGATGAGGCAGATTTTGAGGCGGAGTTTTGAATCTCCGAAATTGATTCGGTCGATGTCTAGTAGTCCGGTGGAGAGTAGCGGAGAGATGAAGCACACGGTGATTGTTCGATCGGAAAGTTGTATTCCTGCAATTTCTCTAGTGGATTCGAGTTCGTTTCATGCTATGGGATTCGATGGAAGTTGTGAATGAAACAGAACAGAGCAAATTGGGAGTTTTTGTTTTATGGAATGGAATAGTACTTGCTCTAAAAGGATTTAAACTGTTGGTCATGCTTTTTCAATGGTTATATTTACTACTTTTTCCAACAGGTTTTTGCAGTTTTGATTAGTTTTCCTTATGTATCATGTAAATATTTATTTATGCGAAACCATCTTTTAGCTAA : AAATTTAATTAAGAAAAGACAAATAATTAAAAA</gDNA_template>
            <first_frame> G  A  H  K  L  N  K  T  I  I  F  V  S  I  Y  L  V  *  Y  Q  S  M  Y  *  I  H  *  *  T  L  F  F  L  F  L  L  R  F  E  I  E  E  V  L  K  F  S  *  F  F  S  L  W  I  R  I  L  F  M  R  *  K  A  S  G  R  R  I  R  Y  K  L  S  K  H  Q  I  *  *  E  E  E  K  A  I  I  I  I  F  A  N  F  A  A  *  I  Y  I  F  I  S  V  F  A  * :   L  T  N  N  D  V  D  N  Q  *  N  S  Y  D  E  S  G  R  S  T  N  S  *  S  K  T  Y  S  A  D  G  G  *  F  R  Q  M  R  V  L  R  I  D  G  G  M  Y  S  V  V  Y  R  N  N  P  A  A  V  P  R  E  L  D  L  W  I  V  C  G  G  Y  Q  G  R  G  D  S  M  *  E  V  D  Y  C  G  R  G  I  E  S  S  S  Q  F  L  *  E  L  Q  F  V  S  S  A  I  E  S  D  C  S  F  N  R  C  D  E  A  D  F  E  A  E  F  *  I  S  E  I  D  S  V  D  V  *  *  S  G  G  E  *  R  R  D  E  A  H  G  D  C  S  I  G  K  L  Y  S  C  N  F  S  S  G  F  E  F  V  S  C  Y  G  I  R  W  K  L  *  M  K  Q  N  R  A  N  W  E  F  L  F  Y  G  M  E  *  Y  L  L  *  K  D  L  N  C  W  S  C  F  F  N  G  Y  I  Y  Y  F  F  Q  Q  V  F  A  V  L  I  S  F  P  Y  V  S  C  K  Y  L  F  M  R  N  H  L  L  A  K :   N  L  I  K  K  R  Q  I  I  K   </first_frame>
            <second_frame>  E  H  T  N  *  I  K  L  S  F  L  S  L  S  I  S  F  D  I  N  L  C  I  K  F  I  D  K  L  C  F  S  C  F  Y  *  D  L  R  *  R  K  C  *  N  F  R  N  F  F  L  Y  G  Y  V  Y  C  S  *  G  K  K  R  V  G  E  G  F  V  I  S  *  V  N  I  K  S  D  K  K  K  K  K  Q  *  L  *  F  L  R  T  S  L  H  K  F  T  S  S  F  P  Y  L  L   : D  *  R  I  T  M  S  I  I  S  E  T  V  M  M  K  A  A  E  A  Q  T  V  K  A  K  L  T  A  P  M  E  V  D  F  A  K  C  E  C  C  G  L  T  E  E  C  T  L  S  Y  I  E  T  I  R  Q  R  Y  Q  G  N  W  I  C  G  L  C  A  E  A  I  K  D  E  V  I  R  C  E  R  L  I  T  A  E  E  A  L  N  R  H  L  N  F  C  K  N  F  S  S  S  R  P  P  L  N  P  T  V  H  L  I  D  A  M  R  Q  I  L  R  R  S  F  E  S  P  K  L  I  R  S  M  S  S  S  P  V  E  S  S  G  E  M  K  H  T  V  I  V  R  S  E  S  C  I  P  A  I  S  L  V  D  S  S  S  F  H  A  M  G  F  D  G  S  C  E  *  N  R  T  E  Q  I  G  S  F  C  F  M  E  W  N  S  T  C  S  K  R  I  *  T  V  G  H  A  F  S  M  V  I  F  T  T  F  S  N  R  F  L  Q  F  *  L  V  F  L  M  Y  H  V  N  I  Y  L  C  E  T  I  F  *  L   : K  I  *  L  R  K  D  K  *  L  K  </second_frame>
            <third_frame>   S  T  Q  I  K  *  N  Y  H  F  C  L  Y  L  S  R  L  I  S  I  Y  V  L  N  S  L  I  N  S  V  F  L  V  S  I  E  I  *  D  R  G  S  V  E  I  F  V  I  F  F  F  M  D  T  Y  I  V  H  E  V  K  S  E  W  E  K  D  S  L  *  V  E  *  T  S  N  L  I  R  R  R  K  S  N  N  Y  N  F  C  E  L  R  C  I  N  L  H  L  H  F  R  I  C  L  :  I  D  E  *  R  C  R  *  S  V  K  Q  L  *  *  K  R  Q  K  H  K  Q  L  K  Q  N  L  Q  R  R  W  R  L  I  S  P  N  A  S  A  A  D  *  R  R  N  V  L  C  R  I  *  K  Q  S  G  S  G  T  K  G  I  G  F  V  D  C  V  R  R  L  S  R  T  R  *  F  D  V  R  G  *  L  L  R  K  R  H  *  I  V  I  S  I  S  V  R  T  S  V  R  L  V  R  H  *  I  R  L  F  I  *  S  M  R  *  G  R  F  *  G  G  V  L  N  L  R  N  *  F  G  R  C  L  V  V  R  W  R  V  A  E  R  *  S  T  R  *  L  F  D  R  K  V  V  F  L  Q  F  L  *  W  I  R  V  R  F  M  L  W  D  S  M  E  V  V  N  E  T  E  Q  S  K  L  G  V  F  V  L  W  N  G  I  V  L  A  L  K  G  F  K  L  L  V  M  L  F  Q  W  L  Y  L  L  L  F  P  T  G  F  C  S  F  D  *  F  S  L  C  I  M  *  I  F  I  Y  A  K  P  S  F  S  *  :  K  F  N  *  E  K  T  N  N  *  K </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06SLe0093P23.1" strand="-"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="72710" stop="72183"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>525</number_coding_nucleotides>
                  <number_encoded_amino_acids>175</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RITMSIISETVMMKAAEAQTVKAKLTAPMEVDFAKCECCGLTEECTLSYIETIRQRYQGNWICGLCAEAIKDEVIRCERLITAEEALNRHLNFCKNFSSSRPPLNPTVHLIDAMRQILRRSFESPKLIRSMSSSPVESSGEMKHTVIVRSESCIPAISLVDSSSFHAMGFDGSCE*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 15 chains have been computed
$ 
$ memory statistics:
$ 183800 bytes spliced alignments in total
$ 13 spliced alignments have been stored
$ 14138 bytes was the average size of a spliced alignment
$ 18240 bytes predicted gene locations in total
$ 11 predicted gene locations have been stored
$ 1658 bytes was the average size of a predicted gene location
$ 8 megabytes was the average size of the backtrace matrix
$ 18 backtrace matrices have been allocated
$ 
$ date finished: 2009-01-16 23:33:25
-->
