<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-01-16 20:52:22"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E624401" ref_strand="+" ref_description="SGN-E624401 [GI|27728148]">
      <seq>cacagattctcttctccaaaaatagggcccgatgattagaggaccaccacaaatcgtccagaaatgtccaaccgacattgtaacagttaaccggaccaatatagttccacgaacgcaccgtcacgctcttcaagatctccggcagcttcgccggcgtgatagtctcaggctcttctcctctgatcaccggattctgaagttttgtacatcggaggaggcgttccaacctaggttggtcgcagcagctaaacttcaggaagaagctcctcaaatgctggacactttcccttcattcaaagtttcccctggtctggctcatccactaggagtatcagaaactgaaagtggaataaattttgcaattttttctcagcatgcttctgcagttacactttgcataattcttccaaagagtgttcatgatggaatgattgaattagcattggatccacagaagaaccgcacaggagacatatggcacatatgcattaaggagttgccccaaggtggtgtcctttatggttatcgcattgatggacctcgaaattggcatgaagggcatcgatttgatgatagcattattttggttgatccttacgcaaaactaattgaaggtcgacgagtttttggagatgaaagcaataaaatgtgtagattttttggaacttatgatttcaatagcttgccttttgactggggagaaaattacaagcttccaaatatacccgagaaagatcttgttatatatgagatgaatgttcgtgcttttactgctgatgaaacaagtagtttggatcaagatcaacggggaagttaccttggcttaattgaaaagataccacatcttctcgagcttggtgtcaatgcagtagaattattgcctgtttttgagtttgatgaactggaattacaaaggcgacctaatccgagagatcacatgatcaatacatggggctactcaacaataaacttttttgctccaatgagtcgatatgcaagttgtggtggcggacctgtccgtgcttcctgggagttcaaagaaatggtcaaggccttgcatggtgctggaattgaggtcatcttagatgttgtttataatcacacaaatgaagctgatgatgaaaacccatatacaacctcattccgaggaatagacaacaaggtttattacatggtagatttaaacaacaatgctcagctgctgaatttcgctggatgtggaaatacttttaactgcaaccatcccacagtcatggaacttatacttgaaagcttaagacactgggtcaccgagtatcatgtcgatggatttcgctttgatcttgctagtgttctttgcagagggacagatggtactcccattaatgctcccccccttgttaaggccatttccaaagatagtgtattgtcgaggtgcaaaattattgctgagccatgggattgtggaggcctatatcttgttggaaagtttccgaactgggaccggtgggctgagtggaatgggaagtaccgcgatgacatcaggagatttataaagggcgatgctggcatgaaaggaaattttgcaacccgtatcgcaggttcagcggatctgtacagagtgaacaagcgaaagccgtaccacagtgtcaacttcgtgattgcccatgatggctttaccttgtatgaccttgtttcatacaataataagcacaatgatgcaaacggtgaaggtggcaatgatggatgcaatgacaacttcagttggaattgtggaattgaaggtgaaacttcagatgcaaatattaacgcactgcgttcacggcaaatgaaaaattttcatttggcactgatggtttctcagggaacaccaatgatgcttatgggggatgagtatgggcatacccgctatggaaataataacagttatggacatgataccgccatcaacaatttccagtggggacaattggaagcaaggaagaatgatcacttcaggttcttttccaagatgataaagtttcgactgtcccacaatgttcttagaaaggaaaacttcattgagaagaacgacattacctggctcgaggacaactggtacaatgaagagagtagattccttgcatttatgctccatgatgggaatggaggagatatttacttggcatttaatgcacaccacttctccatcaaaacagcaataccttcaccaccacgaaatagaagttggtaccgagtggtggacactaatctgaaatcaccagatgattttgttactgagggagtgtctggtatcagtaaaacttatgatgttgcgccgtactctgctatccttcttgaagcaaagcaataattaccgggactatgctgctttagatgttgtccatgagttattacagtattacctccttctggattggatagttcaaatcggaattcaggctgttagcctatagatgtttgcaataagcaaccagtttgttcaagctgctattgacaggtacaaacaccccatagtaataagataaactgagaccattgatccaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="60658" stop="17752"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="60360" g_stop="60115" g_length="246"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="256" r_length="256" r_score="0.854"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="60114" i_stop="58522" i_length="1593">
            <donor d_prob="0.957" d_score="0.92"/>
            <acceptor a_prob="0.965" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="58521" g_stop="58364" g_length="158"/>
          <reference_exon_boundary r_type="cDNA" r_start="257" r_stop="414" r_length="158" r_score="0.968"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="58363" i_stop="56930" i_length="1434">
            <donor d_prob="0.954" d_score="0.98"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="56929" g_stop="56851" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="415" r_stop="493" r_length="79" r_score="0.987"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="56850" i_stop="55008" i_length="1843">
            <donor d_prob="0.997" d_score="0.98"/>
            <acceptor a_prob="0.993" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="55007" g_stop="54771" g_length="237"/>
          <reference_exon_boundary r_type="cDNA" r_start="494" r_stop="730" r_length="237" r_score="0.970"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="54770" i_stop="54063" i_length="708">
            <donor d_prob="0.861" d_score="0.96"/>
            <acceptor a_prob="0.696" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="54062" g_stop="53958" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="731" r_stop="835" r_length="105" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="53957" i_stop="53659" i_length="299">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.980" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="53658" g_stop="53554" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="836" r_stop="940" r_length="105" r_score="0.990"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="53553" i_stop="48192" i_length="5362">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.291" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="48191" g_stop="48057" g_length="135"/>
          <reference_exon_boundary r_type="cDNA" r_start="941" r_stop="1075" r_length="135" r_score="0.993"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="48056" i_stop="47933" i_length="124">
            <donor d_prob="0.817" d_score="0.98"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="47932" g_stop="47846" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="1076" r_stop="1162" r_length="87" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="47845" i_stop="47197" i_length="649">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.971" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="47196" g_stop="47139" g_length="58"/>
          <reference_exon_boundary r_type="cDNA" r_start="1163" r_stop="1220" r_length="58" r_score="0.966"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="47138" i_stop="45771" i_length="1368">
            <donor d_prob="0.928" d_score="0.96"/>
            <acceptor a_prob="0.978" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="45770" g_stop="45707" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="1221" r_stop="1284" r_length="64" r_score="0.953"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="45706" i_stop="44814" i_length="893">
            <donor d_prob="0.957" d_score="0.96"/>
            <acceptor a_prob="0.421" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="44813" g_stop="44714" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="1285" r_stop="1384" r_length="100" r_score="0.980"/>
        </exon>
        <intron i_serial="11">
          <gDNA_intron_boundary i_start="44713" i_stop="44372" i_length="342">
            <donor d_prob="0.767" d_score="0.96"/>
            <acceptor a_prob="0.615" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="12">
          <gDNA_exon_boundary g_start="44371" g_stop="44271" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="1385" r_stop="1485" r_length="101" r_score="0.980"/>
        </exon>
        <intron i_serial="12">
          <gDNA_intron_boundary i_start="44270" i_stop="42439" i_length="1832">
            <donor d_prob="0.996" d_score="0.98"/>
            <acceptor a_prob="0.994" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="13">
          <gDNA_exon_boundary g_start="42438" g_stop="42387" g_length="52"/>
          <reference_exon_boundary r_type="cDNA" r_start="1486" r_stop="1537" r_length="52" r_score="0.942"/>
        </exon>
        <intron i_serial="13">
          <gDNA_intron_boundary i_start="42386" i_stop="41387" i_length="1000">
            <donor d_prob="0.959" d_score="0.94"/>
            <acceptor a_prob="0.969" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="14">
          <gDNA_exon_boundary g_start="41386" g_stop="41324" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="1538" r_stop="1600" r_length="63" r_score="0.984"/>
        </exon>
        <intron i_serial="14">
          <gDNA_intron_boundary i_start="41323" i_stop="40220" i_length="1104">
            <donor d_prob="0.545" d_score="0.98"/>
            <acceptor a_prob="0.996" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="15">
          <gDNA_exon_boundary g_start="40219" g_stop="40130" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="1601" r_stop="1690" r_length="90" r_score="0.967"/>
        </exon>
        <intron i_serial="15">
          <gDNA_intron_boundary i_start="40129" i_stop="40047" i_length="83">
            <donor d_prob="0.969" d_score="0.98"/>
            <acceptor a_prob="0.991" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="16">
          <gDNA_exon_boundary g_start="40046" g_stop="39974" g_length="73"/>
          <reference_exon_boundary r_type="cDNA" r_start="1691" r_stop="1763" r_length="73" r_score="0.945"/>
        </exon>
        <intron i_serial="16">
          <gDNA_intron_boundary i_start="39973" i_stop="38023" i_length="1951">
            <donor d_prob="0.982" d_score="0.96"/>
            <acceptor a_prob="0.983" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="17">
          <gDNA_exon_boundary g_start="38022" g_stop="37943" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="1764" r_stop="1843" r_length="80" r_score="0.975"/>
        </exon>
        <intron i_serial="17">
          <gDNA_intron_boundary i_start="37942" i_stop="37450" i_length="493">
            <donor d_prob="0.443" d_score="1.00"/>
            <acceptor a_prob="0.966" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="18">
          <gDNA_exon_boundary g_start="37449" g_stop="37345" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="1844" r_stop="1948" r_length="105" r_score="0.981"/>
        </exon>
        <intron i_serial="18">
          <gDNA_intron_boundary i_start="37344" i_stop="37271" i_length="74">
            <donor d_prob="0.884" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="19">
          <gDNA_exon_boundary g_start="37270" g_stop="37172" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="1949" r_stop="2047" r_length="99" r_score="0.960"/>
        </exon>
        <intron i_serial="19">
          <gDNA_intron_boundary i_start="37171" i_stop="36340" i_length="832">
            <donor d_prob="0.968" d_score="0.94"/>
            <acceptor a_prob="0.713" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="20">
          <gDNA_exon_boundary g_start="36339" g_stop="36278" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="2048" r_stop="2109" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="20">
          <gDNA_intron_boundary i_start="36277" i_stop="35281" i_length="997">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="21">
          <gDNA_exon_boundary g_start="35280" g_stop="35172" g_length="109"/>
          <reference_exon_boundary r_type="cDNA" r_start="2110" r_stop="2218" r_length="109" r_score="1.000"/>
        </exon>
        <intron i_serial="21">
          <gDNA_intron_boundary i_start="35171" i_stop="18259" i_length="16913">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="22">
          <gDNA_exon_boundary g_start="18258" g_stop="18036" g_length="223"/>
          <reference_exon_boundary r_type="cDNA" r_start="2219" r_stop="2437" r_length="219" r_score="0.888"/>
        </exon>
        <intron i_serial="22">
          <gDNA_intron_boundary i_start="18035" i_stop="17978" i_length="58">
            <donor d_prob="0.000" d_score="0.80"/>
            <acceptor a_prob="0.970" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="23">
          <gDNA_exon_boundary g_start="17977" g_stop="17947" g_length="31"/>
          <reference_exon_boundary r_type="cDNA" r_start="2438" r_stop="2466" r_length="29" r_score="0.613"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="2584" polyA_stop="2634"/>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E624401" ref_strand="+">
        <total_alignment_score>0.957</total_alignment_score>
        <cumulative_length_of_scored_exons>2462</cumulative_length_of_scored_exons>
        <coverage percentage="0.935" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E624401" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="60360" e_stop="60115"/>
          <exon e_start="58521" e_stop="58364"/>
          <exon e_start="56929" e_stop="56851"/>
          <exon e_start="55007" e_stop="54771"/>
          <exon e_start="54062" e_stop="53958"/>
          <exon e_start="53658" e_stop="53554"/>
          <exon e_start="48191" e_stop="48057"/>
          <exon e_start="47932" e_stop="47846"/>
          <exon e_start="47196" e_stop="47139"/>
          <exon e_start="45770" e_stop="45707"/>
          <exon e_start="44813" e_stop="44714"/>
          <exon e_start="44371" e_stop="44271"/>
          <exon e_start="42438" e_stop="42387"/>
          <exon e_start="41386" e_stop="41324"/>
          <exon e_start="40219" e_stop="40130"/>
          <exon e_start="40046" e_stop="39974"/>
          <exon e_start="38022" e_stop="37943"/>
          <exon e_start="37449" e_stop="37345"/>
          <exon e_start="37270" e_stop="37172"/>
          <exon e_start="36339" e_stop="36278"/>
          <exon e_start="35280" e_stop="35172"/>
          <exon e_start="18258" e_stop="18036"/>
          <exon e_start="17977" e_stop="17947"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAACGATTCTCTTCTCC-AAAATAGGGCCCGATGATAAGAGGACCACCACAAATCGTCCAGAAATGTACCACCGGCATTGTAACTGTTAACCGGACCAATATAGTTCAACGAACTCACCGTCA-------C--GATCTCCGGCAGCTTAGCCGGCGTGATAGTCTAAGGCTCTTCTCCTCTGACCACCGGATTCTGAAGTTTTGTACATCGGAGGAGGCGCTCCTACCTAGGTTGGTGGCAGCAGCTAAGCTTCAGGTACGAAATTCTCTTTCACGTGTAGTAACCCAACTCTGGCGAGTTCAGTCAGTTCTTTTTTCAAATCTTACTTAGACAAAGCAGTATAATCTGTGCTGATATCATGTAAATACAGAGCCAATGGATCAATTTCCTTGTAGTTATTATTCGAAGATCCCTCAATATCTCTACCTTTGATTATGCTATGAATACTATGGGTATATGAATGGACTGTACATTTTGTAAACAAGTACAAGAATATTAACACTTAATTTTTTGTCGAGGACTGCGTTTATAATGAGGTTGATACTTTTTATAAGCCTTGATCGGAGCCTGGTATAGGATTGATAATTTTCCTTCTAATATAAAAAGTATGAGTAGAAGGGCTCATTCCAGAAGTTTTTCCTTGAGGTGAAAGGGGAAGGGGCAATGGTACTTATGCAGAGTCGGGTTAAATGAGTTCTGCGGATAAGTGATTCGGTGCAAGCTCCTGCTGATGACATTGATGTAGAAAATCCATCTAGAATTGATTGAGCTAAGTGTTGAATCATAAGTAGGAGGGATAGCGCTTCCTTTTCTCTTTATATGTTCTTTCACTACTTATGCCTTATAGCGAGAAAAATAAGCTTCTTCCAGCTTCTGTCATGACTTCCCTTCCACTTTCCTGAACTCTTGCAGGACTTGATTTGCGGGAGATGAGGTTTAACTCCTATAGCTTTCCTTCTAACCATGCACACAAAAATGCCACATGTTTGATGTTTGAGTAGGGTCACTAAGGTCTATGTCAGTGCTTTGTTTAAGTGAGTGGTATGAGCACCTACTTTAACATTTCATATTCTAACTAATAAGACTTGGAACTTAATCTTTATCAGAAAAGTACACTTAACAGCAGTTCCCAGTACTTGTTACTAACTGAAATCAGAATTCTACCTAGACATATTATGTAAATGATCTTTTTTGTGATATTTACTTTTCCTGATAGCATCAAGAGTGTTATGTAGGAAGTGATGATGGACCAATTGGTCTAGAGAGCTGTCATCTCCTTTTTATAAGGACATGACCAATCCATCCCTCAAGTATATGGTGAAGGATTTGTTCTCTCATTTTCTCATTGCTATATCTTCTTCTTTCTTAGAAGTTACAACCTGAGACTAGATTAATGACCACCTCTCTACCTCCCCCTTAGGATTTATGCTGCTATCTGGCGACCTACCGAAACAGATGATCCTTCTTCCTCTTCCCCTCTCCCCAACCTCCCCAATTATGGCTTTTACCCTGATTTATTGTACACTTGGTAATTATTTCCCTGGTTTATCATATAATTTTGTCATTTTGTGTGGTTCAATTCTGATAGATTTACGTCTTGCATGTAAAGTTACTATGGTCATTTATCCACTGCATAATAAATCGGGTCAAATATCAGAATATAGAATGTCTCACCTATGATCTTATACAATACAAATGAGATATCCTAACTAATCCTAATTTTGTAAACCAAACGATGGCCAATTTTGCTTTCTTGGCTGACCTTTATTTTTAAAAGTGGACAAGATTACTACTGTCCTATGGGAAGCCTAAACTATTTGATTTCTTTATTTGTGCTCATGCTTTTAGGAAGAAGCTCCTCAAATGCTGGACACTTTACCTTCATTCGAAGTTTCCCCTGGTCTGACTCATCCACTAGGAGTATCAGAAATTGAAAGTGGAATAAATTTTGCAATTTTTTCGCAGCATGCTTCTGCAGTTACACTTTGCATAATTCTTCCAAAGAGGTTAGACTCACGCTTTTGGATGGTATATTTTGTTGTCTTTAATTCTGGTCTTAGTTGCAAATTCTAGATATTAAATTCTACTACTGTTAATCCTGCCTATTAAATTTGTTAATGTTGAGATATTATTTGATTTGCAAAATCAGAGTGATTTGATATTACTAGGATTGGTTTTGTAAATATACACCAACCAAAAATGTATACAAGGTGTAATAGTAGTAATCCCATCCAAGCTTAAGGGAACAATCAAGCTTTCCGTTTCTTCTCATTCTTTTCCCAATGTTCAATGGTATTAGACTCAGAGGAATTCTCATATGATCTTTCCTTTCCTTCTTATCCTCCAAATCCTCTGGATGGAAAAGATAAACTTCCGTTCTGCCCAATTTAATCTGGAGGTGTAGGAGTAAGTTGAGCGTCACCTCCTATACAAGAAGTGTGACAGGGCTCGAGTGACCTTAGACCGTGAAGCTCATCACCAACAGCTTTCTTGTCCCCGTCAATGCATCGATTTGCCTCACCAGAGCTTAATCCATGTGCAGATGCGGGAGACAGAATTCTGGCATCTCTTCTGACTGAGCTCACCTGACAGCGAGCCATATCCAGTGGTCTCCTTTTCCGATTCATCACTTGTGACTCCAAATCACCTCAAGGATCTCTGGGAAATACCCGAGGGTCTTTCCGAAGCAACCTCTCTACCTCCACAAGGTAGTGGTAAAGTCTGGATACATTCTACTCTCTTTAGACCTTCACTTGTGGAATTTCAGTGGGTATGTTGTTGTAATATGAATAATTCTAACCTAACATAGATTGGATTATGGAAAGCCAGTGGGTTAGGTTGTTTTCCATGCATACTGGGAGATAAATAGGAGAGGTTGAAGAGAGGGGTATGGGATGCCTTACATTATCTATTCCAATATATTTGAAACGGGAAGGACAACATATGCCCTTCTTAATTCCCCCCCTGTAATTATATCAACAAGGAGGTGGGTGGGATGCCAAATGTAAGTAAAAGCTTTCTGAACAGCATAGGAACGTTTCATCTTAAATTCAACTTGTAGGTATCGTCACATCCCTTCATCTATTGCAACATTTCATCTAAGATGGAGAAAATCTAGAAACTATGTTAATGAAATGGTGTTAAACATTCTGGTGAACCCAGCATAACCTTTTCTGCAGTAATTGACGTTGTATCACCTTGAGATACCATTATAAATTTAGTATGTAGTAAATGTTCAAAAGATTTGTTACACTTAGGATGAAGTACCATATATTTACAAAGACTTTGGAGTATTGAACAGTTTAAAACTACCTGTTCATTCTTCTTGCCAGGGAATAGTACTATCCCTGGTGAGCTCATGCTCATTTTTCTCATATATCATATGCACATCTGCGTAAAGCATGTTGAGTGAATATATGTTACATGGGAATGCTTGACAGTGTTCATGATGGAATGATTGAATTAGCATTGGATCCACAGAAGAACCGCACCGGAGACATATGGCACATATGCATTAAGGTAGTAATTTAACTATTTTATGTACCTTCATTACTGTATTCACTCAGCAATCTTCAAAGATTATATGATTTGGATGCTCATCGTATCATGTTGGCTGTCCACTTTCTACTCTCTTTTTGCTATTAATTGACCTGCTCCCTATTGTAGGCAGTGTCAAATGATTGATCTCCTTCCTTAATGAATACTCAAATGTGTCCATAGTTTCAATATAAAGTAAACATATTGTGGTTTTCTGTTACATTTTTAAAAGAGAAGTTAACATATTGTAGTTAGAACTGAATGTCATCCAATTGTATGTCCAATGATTATTTGAATTTAATTTATCTTTCCTGTTATTCTGTCGAATAAAAACATTTCAAATCCTTTCTGTAGAGTCATTGAGTTGTCCTAGTAAGTCAAATGACCTCACATATTTGGTAGGGTATCTAGCAATTCTTTGACCTTGACCTCACATGTTTCCAACTTTTATTGAGAATATCCCAACTAAGTAAAACACATAAACTAATGAAACTTTCTTTCCTTAAATTTCCATGCTGGAGCTGGAAGGAAGTAGTTCACTTCAGATAGATGCATGGAATATGGATCTTGCTAATCTGAAAGGATTAAATAAAGGGATAAATTAAGATGAAAGAGAAGTAATGTAAATGTTGATTGTGTTAATTAATATGATTTTAGGAGACTTTATTTTTCCTTTCCTAGCATTATTGTAGGAACAAAATATTTTTTTTTTATTGTAAATTGATTGTCTTTCCTTAGTAAGGGTCCATTGCAAACTACCCCTTCTCTTTAAGAACCCTAATTGATTGTAGTAGACCTAGTTAGCATATTAGGGATGATCATGTTTAAGCATATTAGGGATGATCATGTGTACTAGCAGATTCAATTCAAGAACTTGGATGATTGCGATCTAGACCCCTAATTGAATAATTAAAGACAATAATAATACAAGACTAGTTACATTCTCCACTTAATCGAATAAGAACCATATATATCAAGCAAAGAGTTTAATATTACCTCTTAAAAAATCGTTCTTGTAAGGTTGTACAAGAAATCCTAAGTAACCAATACACGAAGATATGAATAAATAAAATCTCAATTTTATTGATAGCTATTCTGTGTCAAAAAGAATGAAATCAACGTGGGTGAATCTAGGGTAAATTTCTAAAACACTATCCCAAATAGCACGAGATTCAATATCTACTTTATGGAAATAATAGATAATAAAACCTAACTAGGAAACTTTAAACTAGGAAAATTGAACTAGACAATTTTTAAACCAGGAAAACATGGAAGATTAATGTCACACTAATTCTAGAACTACCTAACAAAATAAGGAAAGAAGTGTCCAATTTTCTCCTGAAAATACGCCTATTCCAACAGACTTGTGCATGTATTTCAGCCTCTTTTGGGGATCCATACATGCTATTAGGTTGGCTATATGAATCTTCACTGACCATATTTCCTCATTTATGTTTAAGCTCATGTTAATCATATACTAAAATAAATAAAAGTGAAAATAAGTCAAATTTCATTCCAATTACTTCCTTTGTATTTATTTGTTCAGATTGGACTTCTAACTCGTTCAAATGCATAATTATCTTTAAGTTTAACATTCACTAGTATCAATTTTGTAATCACAAATTTCCTTGGATGAATCAATAGTTTCCCATATTTTTGTACTGTTGGAACTGTGTAATGAAGGTATACATTTCTCTTTTCAGCAGGCCTTTCCGTGGTTTCTATTTTACTCACAGTTTATGCTGCTATGTCACTATTATATGCTATTATTGTGCTTGCTATATAACCTTTTCTTACTGTATTATTTTTTCTCCGTCATCCGCAGGAGTTGCCCCGAGGTGGGGTCCTTTATGGTTATCGCATTGATGGACCTCGAAATTGGCATGAAGGGCATCGATTTGACGATAGCATTATTTTGATTGATCCTTACGCAAAACTAATTGAAGGTCGACGAGCTTTTGGAGATGAAAGCAATAAAATGTGTAGATTTTTTGGAACTTATGATTTCAATAGCTTGCCTTTTGACTGGGGAGAAAATTACAAGCTTCCAAATGTACCGGAGGTAGATTGAGAAGAACTACTTGAATAACTTTTTTCCTCGTGTGCAAATCTAAAGATAATTTGCTTGCATGTTCAGCTATTTGACTTATGAGCTATGACTAGTGACAGAGCTGTCATTTTGTAAGTGCTCAAATTGTCTGCCATTTAGTTGATCTTGTTATTTCAAGTAAGAGGAGTTTCAGCTTAATCTTCTGTAGTAATATTATTGGTTCTTTGGTAGATTGAGCTGTAAGATTATAGTACTTAGATCTTTTATAACATTTTACTCTTAAGGATAGTTCGATTTGCATTTTACTTATGAGTGGATTATAATGTAGGGACTGCTTGTGTGGTGATTAATATGTAACAGATTGCTATGCAGTCATTAACGATCAAGGAATTGTTGTGTAGTGATTAAGAGATTATTGCCATACAAGAATAACCTTTTTTTAGTGACATTCTTGTCTTTGAATAGTCTAATCTCTGTATGGCTAATACACGTATTCTTGTTTCACATTGTATCTAGTATATAATATCACATAGATTCTCGTATAACTGAAGTTGTATTATTTGGATACCACCAACCAAATGTTGCATTACATAATGCGCGATTGTGCAACCAACCAAATGTTGTGTTATTCTATGCCCGAATATTTGCTGGATTTGTTACCACACAATCAACCAAACCAACCATTAACTCCTTGCAGTATATCCTCTTTTCTTTGGGCAGAAAGATCTTGTTATATATGAGATGAATGTTCGTGCTTTTACTGCTGATGAAACAAGTAGTTTGGATCAAGATCAACGGGGAAGTTACCTTGGCTTAATTGAAAAGGTACTTCCATATTCTACTTGTCTATTTTCTCTTTTACCAACTACTAGCATTTCATTTGTTTGTTGAAGTTTGGTGTATCTTCCTTAATAGCAGTACTGCAAGTTACACCACGAGTTAACTTCCCAAATACTTACATTTTTGTTTTGGCAAGGTCCAATTTTAAAATTGCTTTATATGTTCTTTGGCCCTTTTTCTTAGATTAGATGTCTTTGATATTTTCATCATATACTAGTCACTTGCAGTAATCTGTTAAACTTATTTTAGTCTTTCAGTTATCTGACATTCATCTACAAATGCAGATACCACATCTTCTCGAGCTTGGTGTCAATACAGTAGAATTATTGCCTGTTTTTGAGTTTGATGAACTGGAATTACAAAGGCGACCTAATCCGAGAGATCACATGGTAAACATACCTTGTCTTTGCGCTTTTTAGCTGTTTTTTGTCTGGGCTTATTCTTTTCTGGTGATTTCTCTATTCTTAAGCTAGTTTATGATGATTATTCTTTCATACTTGAATTGTTTTTGTATGTGAGCATGCATCGTTGAGTCATATTATGCTTTCTCTGATTTTCACTATTTTGACATTTTTATGGCGTAGTGTATCAGTAAAATACCAATGCTTTGAATGGTAAAGATGGAATTAACATCCCACCTTTACTCAGAAATGCCTGATCACAATAGTAACTCAGATCCTTTCAAATGTGCCCAGGAAACTCTTATAGTGATCTGATTGAAACAAGCGATCAACTTTATATATTTATTTGGGAACCAATTGTGAAAAGAAAGAGGAGATTTGAGAATGAATTGCTGTATAACTCCCTCAAGCATGTTGGAGATTATATAATGTTTACAAGTAATCCAAAAAGAAAAAGAAAATAATGCTCATTCATATTTATACAGTTATACAGATCTGCACCTTTCCTATATTAACAAGGAATGGTGCCACAACCCAAAATCTCTAGCTGCATGATATGATCCTAGTTGGGAAACTAAGGATTCCAATGCGGAAAACAACACAAAATGAGGATAGGGGAAATTGATAGATGAAATAGAAGAAAGAAAAGATTTTTCAACTATATTATGTGATTGATCAACTTAGGATTGGTTACCTACACCTATCAATCAACAATCAAAGATGAATCAATCCAAGGGGGAAGGGAAACTTGAACTCATACATGAAAATCTAATCCTAGATTATCCTAGAGGGGCTCAAAGCAAAGAGATCAGGGAATTCACCCTCTAAACTAACCTAATATCCATAAAGGAGGAACTACACTCTCAAAGGAGTTCTTAAATCTTCAATCTTCAAAATATGAAAAATGAAAACAACTAAGATAACTATTTATACTTTTGCCTTACAAGCATAGCCCAAAAGTGGCATTTGCACAAATAGCAAAAATATCCCTTCCCTATTTGAGTTGCAATGCCACTTGCGACCGCAAGTAAAGAGATGCGGTCACATTTTGTGAGCGCAAGTGATCTCACTTTGATGCGATCGCTTTGGGTAGGATGTGGCGTCACATATCTTGAAATGCGGTTGCATCCTCTTCTACATTTTCTTTTCGAGCTATCCTTCCATAACTTGAGCATCTCCACATGTGAAATTGGGATTTCACCCTCTTCCATCCAAGCTATTTTCCATAGCTTGAATGCTCCCACACATGGGTCTTGAATGGTCCTTTAGGACTCCATCTTCTTAATCAATGAGTGTATAGCTTGAAGATGTTAACTTGAGACTCCTTGAAGCACTTCAACTTTGGTGAAAGTGTTCCGTGGGCCAAAATTGGCTTGATTTCATGCTTCATCATGTATCCTAATCACCATTAAGCTTCTTGTGCTTTCCAAGGTTGTATCATCCTTTCCTTATTGAAAAGGATTCTTCCTAAAATCCAGATTTAGCAAAACCATAAGGAAGACAAACAACAACAAAGTCCTCAAGGCATAAGGGTTAGTGTTAGTGTTAACAATCCTACTACCAACATGTCAAGCATGCACAAACTTGTTATATCATCTAGCATCAACCATTCTTATCAAGAACAAATTTTCAAATAAAGCACAAGGTACTTTATTATTTAAGAGACCTTGACCAAAGGGTAAATCAAGAGAGCCAATACATTTAGGAATCCAAGCATGCAAGTTCTTGTTGGTTCTATTGGCCAATAAGCATATTTATCCCCTTTAAGTCAAGAAACAAGTTATAAAACCAATGGCGAAGGGCAACGTCATAAACAAGGCCAACGTTAAGATTCTACCTAATGTACTAGCCCATCTAAAACTTTGAATCACTACCAAGTTATCACCGGGTCAAATACAAAGGTATTATTCCCCACAAATGGGCAAATATGGCTATATGCCCATAATAGGTAAAGTAATAACATCAACAAGAATCACATTACTAAAAGAAAAGTGTTAATACCATTCTCATCACACAAAGATGTTACATCCATGGCTTTACAAAACCCAAGAATAAGCATGAACCACATATACATACCTACCTTGAAGGAAACACAAAAAGTGGCTTCACACACAATTGTTTTTCCATTATGTTTCTTTAATGGCCATCTTTCTTAAGTTTCCTCCTTGGATAAGACTTCACAAACAAGTCAATTAAATAGTTAAGTTCATCAAAAGAGAGTTTTACCTTCTCTAACACGACTTTGGTCTATCAAGTGGATTATAAAACCTCAAGGACTTGGTCATGGGGAAGGGTGCCAACAACTTCACCCCCGTCTCGCTTGTCTTTATGACCAAGCATCACCTCACAATTAAGGGATCCATGATCCCTCAAGAAGAAAGTTCCTCCACTAGGAATGTGTCATCATCACATAGTGATTTACCAAATACCTTGTAGCCTCTAGAAGTGTCTACATCTAAACATCACACTCATACAACTGTGATAAGTTGATCATAGTCATGTCATCATCAAATAAGATTGTCTTTTTATATGACCTTGAGCAATTCTCTTCTTATGAGCTAGCTTTTAGGCTTAAAATTTATTTATTTACCGAGATGTCTACTTGATATGGAAGGAATTCTGTTAATTCTCCTTTAGGTTAAAAAAATCCTTACTAACTTGCATGCAAATTCGAGTAACATGAATATTTTTGGGTCGTTGATCTTACAGAGAATAGATAACTTCATGGTGTCTCCATGTTTATTACTATGTCTATTACTATAATTACACTTAAATTGAGTTCTTCCAAACTGACCTTTTTCTCAGCGATTCTTTATAGACCAGGACGTTCAATTTTCCGTTATTTGAGATGTGAGAAAAAAAGTGTCAACAATTGGTGAGGAATCCAGTCCGTGACTAGGTTGGCCAGCTTGGCGAAATGGTCGAGAAAATAGTCCATCAACTGTAGAACCTTACGACGAGCCAAAATTTGGTCACACACCGATCAAGGTCATTAGGAAGTTTAGCAAGTGTGCGATCTAGAAATATCGTCAGTGATTGCCCATGTTGCTTCAACACTAGTATTATTTGACATCAATTTCTATAATTCCTTTGTGATTGCCTGTACCCGTCTCAAGTAAGTAGAAATACCCAATTCCTCTTTCTTTAAGTTTATCATTTGAGATATACCATATTATAAAAATGAGAATATGCCATTAGTGTATTAAGAGCAAGCCTTTCTCAAACAAAATAACATGTCTGAAATGGATGAAACAAAGACCTTAATTTGGAATTTGAGTAAGTTGCCATATGAGACTAAATAGTTGAGCATCAACTTTTTCCCACTGTGCGTGGCCCTTTTCACCCCCCTCACTAGATTTTTGTTAAGTGATCTTTAGTGCCTTGACCCTTGCACCACAACTCAACTGAGCTAGCCAAATTTAAATGGTTTCAACTTTTAAATATGGGTGTAGAAGTAATTGTAGGACTTGAATTTTCATTTCCCGCACCCAAGGGTGTGACCTAGTAATCAATGAGGTAGGTTGAGTACCATGAGGTTTCTGGTTCAAATCCCAGTGGAGACAAAAAAACACTAGGTTATTTTCTCCAATCGGTCCAAGCCTTGGTGGACATGGTAAGTACCTGTTGCTGGTGGGGATGGCAAGTATCTTATGAAATTAGTTGAGGTGCGCGCAAGCTGGCCCGGACACAAAAATTATGAAATAACAAAAAAATTCCGATTCCCCATAAGTATCAAAATCCAAATGACATAATACTCCACAAAATATAATGGATAAGGTGACAAAAAGTGCAAAAGAAGATGTGAGAATAAAATGAGGAGATGTCACAGCTACAACCAAGGTACACAACACAAATTAAAATAGTGGGAAACACTGTTGAAATGAAGTGGACTGAAGAGTATTTTCTTTAGATTCTTCTTTTTCTTCTTTCCATCTACTTTGTTCTATCTAGTGGTATTATTACTTTTTTTTTTTTGAGCAAGGTAAAGTTATATTCCTCAGCAATGTAGGTATGCTGTCAACCATCAAAAACATTACAGTGCAAGTAATCATAATTACAGATAGTCTAAGAAGTCTACTGTCTGTTCTACCTCATCTATACCCTCTTCTTTACACCAAAGATATAAAGTATTAATGCAGTTTTCTTTTACTTTCTGCATTGGATTAGTAATATTTTCAAAACATCTATTGTTTCTTTCCTTCCAGGCTGACCACCATATGCAAGAAAGGACTAGGCTTCACCATTTTTTCTGTTTTTTACTCCCACCTCTTCTCATCCAGCAGGTTAGAAGATCTGCCGTATGCTCAGGCATCAACCATGGTTTTTAAATGTGATTAAGAAACATGTGCCACAGCTGAGAAGTCACTCTACAATGGAGGAACAAATGGCTATTTGTTTCCTCCTTTTCCTTGCAAAAGAACCACCTTGCGACAATCTCAAAACCTCTCTTTTTCAGTTTCTCCTGAGTGAGACAGCTCTTCTACAAACCTTCCACGTGAAACCCTTAATCTTGGTAGGGATATTAGATTTCCAAGGTCCAGGGATGTTCCCAGGTTGTGAGATCAAAATTTCTTCTGTACAATCTTCCGACTGAAAATTTTCCATCCCTATCATGTCTCCATCTGATTATCAAGGCTGGTATTTAAACCAGAGAAATCATTCAACCTTTGCAGTAGGCTGGCCACACTCTCAATCTCCTAGTCATTTAGAAGCCTCCTAAAGATGATATTCCATCCTTGGTTAGTCCAGGTCTCAGCAATGGATGCTTCAGGAGTGCCACAGAAAGAAAATAAATCTGGAAAATTGTATTATTACTATCTTTCTGTTAATTAAATTCTTCGAGTAGGGTAGAAGGTTTGAATTTTGGCTCTTTTTTTGGAGGGATTAGGCTTGGTGGGAGTCTAGAAGCACCGCGTATGCCACAGTATTAGCTTTATGCATGTAATTTCTTGCATATGATATCTGTTACCATCTGTTGTCTTTTGTGTTTCAGTTATCGCATTATTTCCTTGCTATTACTATTCTTTTTCTGGATGCCCTATCCTGCTTGCGTATTAATTGACCATTTTTTCCACTGTCATATTTCCTTTTTCATAACTACTTCTACCTCCACGAGGTAGGGGTAAGGTCTGCGCAAACTCTACCCTCCTCAGACCCCACTTGTTCAATTACATTGTATGTGTTGTTGTATCTGCTGAAACTTGATGAAAAGATGCTTTGTGTGTGTGTCTGTTTGTATATGTATTTTTGATTTTCATGTATTGAAAATCTTTATTGACTACAATGTCAATTTAAGTGTCAGAATGCCCTTGGTTTGACTAAATCCTTTTTGGACTCGTGTTAACTTTAGATCAATACATGGGGCTACTCAACAATAAACTTTTTTGCTCCAATGAGTCGATATGCAAGTTGTGGTGGCGGACCTGTCCGTGCTTCCTGGGAGTTAAAAGAAATGGTCAAGGCCTTGCATGGTGCTGGAATTGAGGTTTTCCTTATATCAGTGTGGTCCTTAAAGAGCTTGCTATACATGTCCAATATGTCTCTTCTACCTTTTCAACCATCTTTCTGAAGATGTTAGTTTCTCTTTTTCACGGTTTTTCATTCTACAGGTCATCTTAGATGTTGTTTATAATCACACAAATGAAGCTGATGATGAAAACCCATATACAACCTCATTCCGAGGAATAGACAACAAGGTAAAGGAACTGTTCAACATAATAGTCAGTATTTGGAAAGTTATGAATTAGATCTTTATTGCACACAATGTACCTTGGTAGGTTACTTTGTCTAGGGAAACATCTACATTTTCTGGTAGCAGGTTCTGGGGGTGGGGTGGGGTATTGTGTTCGTTAACAGATAACCATTTTAGTAATCAACATCATCTTTGAACTAAGTCTTGATTGATGCATCCACCCGCCACAAGAAAAGTTGTTTGCGTAACTTTACGGAGCTGCTCAACTGGAGTGGCCTCTGATTATGGAATTTGGCAGTGTTTTTACTTTCTGTTCTGCAGATTATTATGGAGTGCATAATCTACTATCATATGTAGTTAAAATGCTAGAACTTGCTTCTTTTCCCCATTCCTCTGCTATAAATCTTCTCTGTAAATCTGCATCAGACCGATAGTTTAGATGAATTTAACTCAATTCTTTTTTTTTTCTCTATAATGCTTTGTCTCCCTCAAAAACCAGATGAGACCAGGCTTACTTTGTCAAGTTCTAAATCAAACTATTCATATCTGATGTTGTGGATGCAGTCTGAATTTCTGTTATTCTATACAAAAGATTTGTCTCTCTGTTTCCCCACCCTCTCATAAATGATATTTCCTTGCCCTCTCAATGGCAGGTTTATTACATGGTAGATTTGAACAACAATGCTCAGCTGCTGAATTTCTCTGGATGTGGTAATTTAACAATACACTTTTTTACCATTGAATAAAAGGAAAATCTGCAAAGGCAGTTCTGAACACATCTTTAAAATACTCTCCAGGATATTTCAATGGTTATTTGAAATTGTTAACCTGAGGCAGTTTCCTAAGGAGCAATTTTGGCAATGTTATAGGCGAATGATTTACTCAACTAGATTTTTACAAATATCACTCCACAAAAAATATATGTACGGAACGGTACAAAATATACAATAAGGGCCCGAAAGTGACCAAAAAAGACAAATATATACAACGAACCAAACCTCGAACCAAACCTCGGACCTGGTGTCACCGATATAAGAGCATCTAAAGTACAATAATAGGACTACAATCTGTCAAACAAAATACAAAATATATGGACCTACAAAAGAGAGAGAACAACAAGTCCCGAATGCCTAGAGCTCACCACGATCTAAGCAGCGACGGCCTCGTGAGATCAGGAATCAGCGAGGGTGGCTCGTAATAAGCATTGCATCAGAAAAAGATACAGAAGTGTAGTATGAGTACCAAAACACTTCTTACATTCACTTAGAGTGACTTCACTTCACGTCTTACAATGTGAGAACAAATTGGATTTGCTTCAGTACACTTATTACATTCACTAAGAGTGAGTTCACTACCATTAGAACCTCATTATCCCTTGCTATATTATATTTGCACCATCTTTGATCTTCACCCACATCAGTATTTCTTGCCCTGGTATTGCTCCTTGACAGAATAAAACATGTTCTCAGGAAGATCCTTGCTTTCTTTCACCATTCTTGTTGTCTACCCGTCTCAACTAGGTTTATTTTGTTTAACCCTTCTCAAATTAAATCAGGGTGAATCTAAAATTTAGCTCAATTTAACACTATTTAAGTTTAAAGAGTATTTGATTTTTAATATAATGGTTAGAAAGAATTTGTTCATCATTCCAAATGGATTCTTTACAGATTGGTTATTATTCACTTACTTCAACTGGTAATAATAATTGGAAATGTAATGAGGCAGTTATTTACTTATTTTTATGATGTTCCAGAAAGGATGTTGTCGCTTGATTATAAATTGACATATCCTGAAATATTTTCACATGGGAGTGAGGCCCAATTCTTTATTGCAGAAGGAATGTTATGGAGTTGAACCATGGAGGAAAAAGGGGAAAAGGTCTAATTACTAATGTTTATTTTACTCCATACTTGTCAGTTCTTAGTCCATGCAGTCATGGAACTTCAAGATTTATAATTGTGTTTGACGTTTTAATGCATACTCTTGCATATTTGCTTTTTCTTTCTTTTGCTTAAAAAGTTGTTATCTTCATTTAGTCTTTGGTAAGAATTCTGAGATGCAATTCTTTGGTCTTTCCAGGTAATACTTTTAACTGCAACCATCCTACCGTCATGGAACTTATACTTGAAAGCTTAAGACACTGGTACTCACTGATTGATATCAATATACTGTTATTTTAGTCAAAATTAAACTAAAGATTTTCTTAATGGATGCGGTTATTTTTTTTATGGCAAGGGTACCTGTTTTTGTGGATGTGGTTGTTGTTTTCATTTGTTTGCACAACACCAAAAAAAAAAAAACTTGCAAATTTCATTATTCTCCGTACTTGTTCAATGTCCATAAAGTGTGTCACAGGCACCTTTACTCTCCAATTTGTCTTATTCCCCTCTAGGGTCTTTTAGTGATAGCCTGATAGGCTCCACGGGTATTGGACAATCCCGTTTGAAATACTTAGTGGCTAGTGTATTATAATCAATAAGTTCTCTTTTTCTTTTCTGTTGCTGAAAAAAAGTAAATAGATAGACATATTTCTATAATTAGTTTGTTTCTCTTCTATCCCATATATCTATTTTAAATTATGTAATAATACATTTCTGATCTGGAAGCCTAGCTGGGGCAAGAATCTCAATATGTTATGACATAGCCTTGAGCCCTTAACCGACCTTTTACTCGGTCACATACACACAATGGTCTATGCAGACTTGCTGGTTGGTCAGTTGATGAGGATATATACTTCATCTTTGAATGCTTATAGTTTTCTTGAAATGCTGATATGTTCATAAAATTCACTATGTCGGCTTGCTCCTAGTGGATTTGATCGTCAACTGGATTAGTTTTTCCAGTCTTATTATCCCTCTCTTTTCGTCCTCTATTTCAATGGTCTTTTCATATGCTTGTTAATAGATGCGGTGCAGATACCTAACTGAAATTATTACTGGCAGAGTGATTTATCCTGGATGACTTGTTTGTTTCTTGACTAACTTTTTTTCATCTCCATTTGGTATCCTCTTCTACTTTTTGTTGGAGCAAATAAAGGGTCACCGAGTATCATGTCGATGGATTTCGCTTTGATCTTGCTAGTGTTCTTTGCAGAGGGACAGATGGTACTCCCATTAATGCTCCCCCCTTGGTTAAGGTGAAGCGTTTATATGCTTTTGTTTTTGATGGTGCATCAAAAAAGAAAATTGTGTGATGGAAAGTAAGTTAATAGTGAGGTGACTATTCCACTGCCATTAACAATTTTCATGTTCACCTCAACCCCTATCTATCATCATCTAGGATTATCTCCCTTCTTGTTTTATCTTCTTTTTTCTTGTCTCTTTGATTTCCCATGTCACTTAAAAATTCATTATAAATATGCTCAAGTCCAACTTTCCCTTGCTTAAGAAAAAGATGACTCCCTAAATTCAGAGAATGTTGAAAAGGATTACACGATGCATTAATGCTTGAGAATGATCAAGATGCTACATACTTGCAGGCCATTTCCAGAGATAGTGTATTGTCGAGGTGCAAAATTATTGCTGAGCCATGGGATTGTGGAGGCCTATATCTTGTTGGGAAGTTTCCGAACTGGGACCGGTAATATCTAAAAGAACTTTATTACTATATATTATTAGTTGGGCTTTTTTCATTTTTAGCACATGGCAGAAATTTATCACGTGCGCTAGTTGAAATAAACAAAACATATACACCTATATTATATGTATATTTATGTGACAATATGTATATTTATACTACAAAACCTATAAGCCGTATGATAGGGAGGTAACTGTCTTGTATCATTGGGGGGTAATCGGTGTACTCTATCTGCTGGCTATTTTGTAAATTAGATCACTAAAAGACATTTTACTTGATTTATCTCTTATTAATTTATCCTATAGTTGAAAAGGAGTGGAAGATCATCTAATGTGAATGTGAAAATTTGGTCAGTGACCTTGTTGGAGACCTAAAATTACTTTATATTATTAATTTGAGGCTACCAGCAGATCGTTGTTCGTAAACATGTCTGCTTGCAGCTCTCAAGGATGTTTTCGGTATTCTGAATTGTTGGAACTGTAAAGATACTGTATGAGATTGCTTTTGCAATTTTTGACAAAAGAACCAGCCCATATTCTATCTATAACCTAGGTCAGCCAAAAAGATGCAGTTAAGCTTTTCTACGCCTATTGGTCCCATGTATTTTCCTTGCATTTGTTTGGATTTCTGGAACACTTGTGGACCCCATTATTTTACCTGATGTTCATGAGACCAGACGCAGTTCAAATTCGATTTTCTTGAACAATTCTCAGTATGCAAAATTTACTATTACTATTGTATAGCAAAAATTAAAAATTAAAAATTATAACTTAGAACTTAAAACAAAAATTGGAAAAAGGCAATCACATACATATGATATATTTAATTATTTTTGTTTTCTCCTGATTAAAATGTTATTTTCAGAAGTCCTAAATATAAGGTTGCTTTGCGTTATACGTTCAATTTTATTCAATGTAACTACTTCATACAAGGTAAAATCTTCATCGCTTTTAAATTTCTAAAATTTCCGGGGTCTCTACTGTGTTTCAGATAGAGTAATCTTTGATGATTCCATCATCTATGATTGAGATATGAAAACTTCTGGATAGGTATCCTAAAATTTTGAACATTTCTATATATTTCAAATAAGGATTTAGCACATAAAATTTAGTTAATTTTAGAATGCTAATAATTATTTTTCAAATAAGGATTTAGCCAATTTTAAATACTAAATATATGAGTTTTTATATTTTTCAAATAATGAAAGATCTAATAGTTAGAACTTAATTAATTTTAAAATCCTAAATACTTGGATAATGTTTAAACAACAATTATTTTATGAAGTTGTAAATGATAATGTTGTCTATTATAAAGTCTTTTAATGAAGAGAAAATAATTCAATTAACATATCTAATAGTATAGATTAGCAACTCAAAAATCACCTAAAATTTCAAAATATTCAATATATGTACCTATAAAAGCTTTAATTGAAATTACTTTTTTATCGTGAAGTTTCATAGCATGTTCCTTATCTTTTTTTTTTTTAGAAAAGGGTAACCTTGTATTCACACCAAAAGATTCATCTATCCAAAAAATGATGAATTGGAAACTTACATCCCACATAGGGTATTCCTTACAAGTTTCCTTTGAAATCAACTAATTCTATTATCTCCCCTATCAGATTTTGTTTACACCAAAAAAAAAAAAGGTTAAACAATTCATTCTAATTTTCTGTAAGTTAAGTTTTTTTGTCCATCAAAGCACTTTGAGTTCCTTCCTTTCCAAAGAGTCCACCATATGCATGCGTGGATAGTTCTCCACCAGAATTCTTTTCTTCCTCTATTGCCAATACCTTTCCACCATGGCATGTTCCTTATCTTGATAAACATATGCAGGTGGGCTGAGTGGAACGGGAAGTACCGTGATGACATCAGAAGATTTATAAAGGTGACACCAATAGGAGAGAATCTGAATTTAAATTTCATTACATTTAAGTTTGTCAGTACAAACTTTTCCATTATCTGACCAATCAAGTGCATCTGAAAGCAACAGAAAAGGGACTAAATGTTTTCCACTGATATTAGCAGGTTTAAATTTCATATATTCATGATTTTAACATAAAATGGTAGACTTCTAGTTATGAAGCTAAAATTCACTCTACTGGAAACATCATTTTTTATTTAGTCCCTGTTCATTTTTACATTGTTAAGTCGGAACTTTAGTTTCTTTGGTGTATGTATCTTTTTTCCATTTTCAACTATTGAGAACCAAACAAGATTTTACAATTATACCAATTCACGCTGTTTTGACCATCCTACTGTGCCCCCTACCATAGAAAGCAGCTGCTAAAACTACATTTGGTACAGTTACACATTAATCCTCAGGCACTTGACAAGTACATACATATTCATAATCTGGGACAATTGTGGAATTTCCAGAGATGTATATTAGAATATGAATTGGAGATTCCAGGCACTAGTAATTGATATCTTCTAATTCAAATGCATTCATCCTTTAAGTGTAATGATAGTTGGATTTGCCATTTTAGTCTTTAAAATTAAGGCTTTGTTTTTCATGTAATGCGACTCCTAATATAACTTAACTGTTTAAAGATATAAGGAGATACAAGTGTTTTATTCAGTATATTCTAACTTTGACATTACAAATTATACTTAGCATAATCATTGAATGAAACTCTTGGAATTTTGAAATTACACTAACATTTTCTATATATTATGACTCAATTCTCAGGTTTGTTTGTTTATTATATGAAGTTGTGAGAATATAGATATTATCGGATTATCTCAATAATAACAGGAGAGAGTGTGTACTTTTTTTTATTGGAACTGGTAGTGTTGTATTCCTCGGAATTAAGGTATGATGGAGACTTCCAAAAAGGTAACAACAAGCTAAAACAAGAGACTGATTATCCTGAATGATTGAACAGGGCGATGCTGGCATGAAAGGAAATTTTGCAACCCGTATCGCAGGTTCAGCAGATCTGTACAGAGTAAGAGCTACAGCTTCCAGAATTATGCATTGACAACTAGAGAATATTCACAACACTGTTCCATTTGCTCTGCTTCTTAAGTACCTTTTCTTTCTTTACTGATAATATTTGAGAAACATTCAGTTCTATGTGGTAGCAAGTTGCTTCACCAGTCCTATTTGATTAGATAGGTTTAGCAAAGCATCTGATTTGTGTCAATGCATATGGCTAGATTCTATACGATCCTTTTTGTTTATTGAGTTAGTAGTAGTATTTATGTGTCAATTCCTTTATATTTTCATCGTACTTTATTAACATGATCATGCCATTTTACATGTAACTGTGAGTGCTATCACATAATATATCATTACACAGTTTGTTTTCATTTATTACCATCTCATTTAAGCTGATTTCATTTGGAATACCGAGTTTCTATTTATCCTTTCCTTTCATTGTAAAAGAAATCTTGTGGATTCTAACCATTTTTATTTAAGAACATAGTCTATCTTTTACTTGAAGTAAGTAGATAAAACTTCCTATTTATGAAATAAAAGATCAATTGTATTCAGAGGTTCTAGTTTTGTATTTGTGTTATTTACTTAAATATATAATCTTGAATCAAGTTTTAAGTTCTTTTCATTAAACTTTGTAGTCAAGGCACTGTACTATATCACTTTTCTGCACAAAAGTATCACGAGAACAAATAAAAAAGAGTTAATGAGTTCGTAAGTAAATAGGAGTCTTTCTCAGTCAAACTCTTTTTTTTTCCCTCCTCTTACCTCTCTGTGTACCTCATGGACTTCTCCTTTTCTTTTACTCACAAATCACTATTTTCTTCACTTGACATCCCACTCACTTCACACAACACTACCTCTCCTCTTCCCTTTCTTGGGATGTCTACATGTATTTGCTTACTCCTTCCATCTTTTCTCTCTCATCCTTATGTTTTATGATTTATCTCAATCTTTCCTAATCTTTACTAGGTATTTTTTTGTGTAAATCAATTGATTTTCATCAAAAAACTTGAAACATAAGCGGTGTTCTATGCCAAATAACATTGAATTCTTTTTATGCTGCCTCAGTTTCACCAAGCTCATATATTTTATTTTATTTTACTTTTCATAGGTGAACAAGCGAAAACCTTACCACAGTGTCAACTTCGTGATTGCCCATGATGGCTTTACTTTGTATGACCTTGTTTCATACAATAATAAGGTATCAGTTACGTTTACTGCTCTTTATTGTTTTGAAACATGAAACTTGTACATCATCTGGATTCGGAATGGTGAAAATTACAGCACAATGATGCGAATGGTGAAGGTGGCAATGATGGATGCAATGACAATTTCAGTTGGAATTGTGGTATTGAAGGTAAAGATGAGGTTTTGATCCCACTTATTTTTTTTTCCTTTCATACTTCCTGATTTCCCTGGTATGAACTAAAACTTTTGTTGCGCCTTCACGTTCTTGCTTGCATAACAAGCTATTAATTTCCTCTATCATGCTTGGTACTTTAACTGTTTAACTAAGATTAAGTTGTTCTCTCTTTACTTGAGGGAGCATATGCTATTCCGAAGTCCAAGACTTTTAGCAATAATTTTCTTCCAAGGATGGGTGCTGAGGATGTAAAGTTTGTTATATCCTCCAGATATTAAGCCCTACCTGTTTTGTTTCTCTTGCTTTTGTTTAACATTGTGTCACTACCAATTATGTGTTATTTGTAATCTCAAACTCCTGGTCTACTGTATAGTGTTAAATAATAAGGGTCTGCATAGTAGCACCAAAGGGTGTGGCCTAGTGGTTAATGAAGTGATTGAGAACCCCGAGGTCTCAGGTTTAAAACTCAGCGGAACTAGATGATTCTTCCCATCTATCCTAGCCTTGGTGGACAAAGTTACCTGGTACCTGATGTTGGTTGGAGGTGACAGGTTAGAGAGACATGGTTGGTTGAAAAGAGTACTAGCCAAGTATTAGCAAAAAAATGAAATAAAATTGGACCAGAGGGTATATTTCAGAAAATACAATCAGATTCTCTTGATAAATGTCCCTGGAAACTAAACTGGTCTACTGTTGACTCAAAACAAACTCCTGAGTGCAAGAAGAAATGGCAGATGTCACCCGTAAAACAAAGAATTCTCTGGAATTGAATATATAATTTTCCGGTGGACGGAATAAGAAGATATCTTAATGGATAGCCTCAGAATTATCTGTCGAATACGACAGAAGAAAAATTGTCAGAAGTTGGGTGGTATACCAAACACACACCCCATCACGTTAATCACGTGCTCGCCGGAACCCTAGTGTTTATCAACGCGTGAGACTTCATCTGCCTAATAACTCGACTGGGGTTTGATCTCCAGGGCGCTGAATCATGGTAATGTTGGTTTTCACACATCACCGAAAGAGGGATAACATAAATCAGATCTGAACAGTCACTAGACAGAATCCACAGCAACTGACTTTTTGCCCTAGATGTTTCTCACTGTTGCTAGGATATCATGTGAGAAATAAAGGTACTGAAAAATATTACTAAAATGTATGTACATAACCCCTATTTATAATTATATTCTACGCAGCACATATTACATAGTAATGCTTTTCCATGTGAGACACTATATACATTAATATTCCAACACTTTCTTCTAATGATTTAAATCAGGAAAAAGACATAATGGATTGTTGTAGCCAGCAGTGATGTGGCAAATACAGAAGTGTGACCATGAATATGATGTGTTTGCTCATACTAGTAAAACAACTAGTTGTAAGTCTTCTGAATGGTTATGCCTGTCCTCCAAGAATGAAGTGAATACTGTATTGAGGTAGATGTTAGTGGAATACCCAGCTGGACATACCAGCCACGAAAAGAGAGTGCAGGTTCAAAACAAGTAGTGTAGATTATAAAATAATATAACATGAACAAATGATGAATTCATCCTTCCAACTAGATAATAATGCCTTGACTGCGATACATTGATTTTTGGCTTTAATAAACTAGCTTTGTCCACTTGTACACTGAGCCTTTGCTTGCCTATGATATTTTTTTTCTGTAGTATATTCCATTTCAGATCTACTTTGCTGTTATTGTCTTCAGACTTCATTGACAGACTCATATCAGTATCCATTTATCATTTTTTTCCTTCGTTCATGGACACAATGTACTAGATTCAGAATCTAAGGTCAGCCCAAGCCCCAAGCTTTAATCTAATTGCAATCCGCACCTACTAACTGAAACAGTTTCCACACTGAAGTATTTCGTTTATGAGTGATGGTATTGTTTCAAATCCAGTCTGAAAGGCTATCATCTTCTTGTATCTTCTTCCAGGTGAAACTTCAGATGCAAATGTTAACGAACTGCGTTCACGGCAAATGAAAAATTTTCATTTGGCACTGATGGTTTCTCAGGTGTGATGCATCATCCGTTCAGTTAACAGCATATGCGTTTCTTTTCTTGCGTATATTGAGAATTAGTCGGTAGCTTATATACTAGATCTCATAATTCTATTTGTCCTTAGTTCACAAATTCTATTTTTTCTCTCATTATTTTTTTTTTGCGACTATTGAGTTATTTGTTTACAGTATTTCTCCCTCATTGTTCAACCAGAAATAGAACACTGTCATGGAATTTTAGGGCCACACTTTTGACATATTATAGCAAATTTCAGATTTTAGTCTGTTTTATCTAATTTTGGTTGAAGTATTGGTTTCTGAAACCCTCATAAAAAGGATTATTTTGACATACTATGGATACTAATTTACTTGGTTATTATATCTTTCCTGGATTATGCCTGTCTTCAGTAATTTTCTTAATAGTGTCATATGCACATTAGATGTCCCAACCCTATTGTTGTTACTTAAGTTTACCTTCCTAAATTTTTGTACTTTCTTGGATTATAAGGGAACACCAATGATGCTTATGGGTGATGAGTACGGGCATACCCGCTATGGAAATAATAACAGTTATGGACATGATACCGCCATCAACAATTTCCAGTGGGGACAAGTATGATATTATGTTTTCTTGCTTGTACTTCTTTCCTGCTACTGCAAGTAACCCAGTGAACTTTGTCAATCCAGTTGGAAGCAAGGAGGAATGATCACTTCAGGTTCTTTTCCAAGATGATAAAGTTTCGACTGTCCCATAATGTTCTAAGAAAGGAAAATTTCATTGAGAAGGTAATGCTATTGTCTACCTGGTGTCATGCTTAACTTTACTGGCAATTGTATTACTAAGAGGTAATTTATTTTGAAAACTGAATGTTATGTTCTGTGTTTCATTTGTGGCAGTATCTTTGTCTTTAAATATTAATGCATCAGAAAAAGCTAATGAAAGAGTTCCCTGCAAAGAAATGATACCGAGTATGTGATCAAAACGGTAGTATTCCTATTTAGACCTTCCGTTTAATGGTTGGTGCTGGTGTAAGATAACCTGGGGGTACTCCAGGTACTGATCTAAGTTGAATGGTCAGAGTATTTGGGGTTCTCTTTGTGGAACATACTTAAATGGTGTTTCTTCACATGATATACAGTTAGTTTAGGTTGTCTCATCTATGATCCACTGGTCCATTTATTCACAGTATCCTTGTCAATGATCATATGTTTGGAAGATTTGATAAATGTTAGACCCCTCAACTACTGATGGTTCTCTTCAAGATGTTTGAGATTTTTCTAGCTATTTGAATCGTTTGGTGCCTCTGATTTTTCCAAATAGGTGGAAAGAAGCAAAAATTTGATCCAATAGGTGGAACTGTATATTGATTCATTTCTAATACATTATGGGTATTGTTTATCCAATGGGGGGAAGAAGGACAGAATTGATCTAATAGATGTAAGGAGGGCAGTTTTTTTAGCTATTTCAATGTTACGTTAAGGGCATTTTTGACCCTTTTCTGTTTTTTGTTTTTTTGGGTGGCAGTGGGGTTCCATTGTAGTACTTAGTGTTCTCTAGCTCTGCATAATGCTGTCTCAATTCGACTATTCTGATGGATTAGCAATCATTACTTTGCAGAACGACATTACCTGGCTCGAGGACAACTGGTACAATGAAGAGAGTAGATTCCTTGCATTTATGTAAGAATAAACCCTATTAATAATCTCCATCTTATCATCTCTGATTCTAAATCATGAATTCACTCACACACTAGAATCAGTCCTCTTTTTAGGCAAGTTTTTGTACGGATTGCCGCTATTTTGGGGTGGTCTTTAATTTTTACCCCTACTGCTCATTCAATGAAAATTTGTTGTCCAAAGTACCCTTAACTATGACTTAATTTCGCCGGAAAACCTTTTTGTATAATGTTTGCCCTAGGGCATCAGCTCAGTGCTATCAAATTCTTAAGGCAAACTTTATGCTTAATTTGTTTTAAAAAAAATTGTTAGGCATAGGTTATGCCCTATTAGGCACAAGTTCACACTACTGAACTTATGCCCCAAGACATAAGTTCGTGTATGAACTTCTTAAGGCATAATGTTTTAAAACCGAACTTATATCTCAAGGCACAAGTTATGATGCCATACAAGGCATTAGTAAAATTTTAGAACATTATGTTTTACTAGACATAAGTTTCGTGTTTGAACTTTATGCCTTAAGAAGACATATGACTGAACTTGTGCCCCAAGGCATAGGCATAAGTTATGCCTAAGGCAAAATAAATTTGCAAGGCATGGATTATACCTATAAGTTGTAAAAATGAACTTATGTCTTATAGGGCATAACCCGTGCCTAGTAAATTTTTATTATTAGGGGTATTTTCGTCTGCCGTTTTATTACTTTAAGTTCTGAATAGAAGATACTAGAAAGCCACGAATTTGAGTGAAAGAAGTTAAAAAACTACCCAAAATAGGGGCAATCATGTGAATGATCCTTTCTAAAGCTGTTTTCATATGGTCTGTTTCTTTTACACTGAGCTTTTTCGTGTTTTTCTTCTATCCCTTAATTTTCAGTTGCACCTGTGTTCTTGATTTTAATTTGTCAACCAAAAATTTTAATGTGACAAGCTCAAAATTTAGGAGCTTTTCTTTTCGCATGAGTGAATTTGCATATTGGATTCTCTTTTGTACAATGTAGGCTCCATGATGGGAATGGAGGAGATATTTACTTGGCATTTAATGCACACCACTTCTCCATCAAAACAGCAATACCTTCACCACCACGAAATAGAAGTTGGTACCGAGTGGTAAGCTATTCTTATTATTATTTTGTTTTTATTTTTTTTTAAAAACAATTACCCCTCCCTAGGAGCTCCACCTTATTGTCCTGTTATTAGTTAAAGGAATGCACTTCGTTTACACATCCAAAACATGAGATAGCCTCTGATTTTGCTCCTGCTCTGATAGTTTGGTTATTCTTTCTTGTATTTTGGATTTGTGCCTACTGATTTGGAAATTATAGGTCGAAGACAAAGTGTTGTATTATATCCTCATGTTAACACCTTATTAAGCGTCTCTAGTGCTCAATACTTGGCTTATGACCGGGCATGAGTTGGATTTTATGAGAACAAATACCAGGAGGGATTCCAATAATGTCCGCAATAGTCCACCCAATAGCTCTTTTGAACCTTTTTAGCACTTTCACCAGACTCTCAACTTGTTCATTCAGGTCTGATGCAATGATTACCGGCAAAGTGTCACCATTTCCTAAGAATTCATACCTGAGATGAGGTGGGAGAGCGTTTAGTTCTAACCTTAGAGCCTCCTCTATGGATAGTTTCGTGGGTGGAGACTCGCGATTCTTCATATCTAACTCATATTTCTTCGGTTTAAACCGAACATCACCTCGATCAAAAGCCGCGACTAAGACTGGCAAACGGACAGGACCGGGTCAACAGGACCGGTTTTATCGGTAACTGGACCGGTACCGGTTTTTTCTTACCGGATTTTACCGGACCGGTTTTACCGGAAAAGTCTCCCTGTTCCGCTCGATCCATTAGTAACCGGTTTGGAACCGGGTTGGACCGGTTTGGAATCGGGTCTTACCGGTTCTTCCGTTTTTTTTAAATTTTAATTATTTTAATTATTATATAATATTATATATTTATATTAAAACTTCAATTAAAAACTTTAAAGTTTATATAAGTTTGAAATTAAATTTATACTTTAAAGTTTATATTGAATTTAAAGTTTCAAATTGAATTTAAATTTTTATATTGAATTTAAAGTTTTTTAAACTTTATATTGAATTTAAAGTTTGAAATTAAATTTAAACTTTAAAGTTTATATTGAATTTAAAGTTTAAATATAAACTTTTATTAAAATAATTAAAAATTAAATTTATAAAATGACATGAAATAAATAGAAGAGACTATTATAAAAAAAAAATCAAGGCGAATAGCCGTATATTTATTCAAATAAATAAATTATACAATACAAATATTAGAAAGAGAATAAGAGTACATAATTTAGGAGGAATTGAATAGTAAATTAGTAATTATTATACTAACAATTCCATTTTTTTAAAAATTCTTTTTGTAAATTTTGTATCATTTGAAAAGAAAGATTTTTTGGAATTGGCATTTGTCGTTCTTCTTCCATTGCTTCCATGCCATCATCACTATTCTCACCAAATATTTCATCTATTTGGTCTTCTATATGGCTACTTAATAGTGGTAGTCCGGTGTTTCTTCTTTCGGCATTGACCCAATCTCGAAACAACACCGATATTTCCAAACTGTCCTTTGCTAATGAATATCGATGATCTCCAATCATAAATCTCGCTGCACTAAAGGCTTGCTCCGAAGCGACCGATAATGCTTGAATCGCTAGCACATCTCGAACAATCCTAGAAAGGGTCGGAAATTGTTTTTCACGATTCTTCCACCAATTTAATATTCGAGGTTGAAGTTCTCCTTCGTCACGCCTAATCTTTTCCCGTGCCTGGTTGAAATATAAATCAAAATCATTATTAGTTTCATCACTTTCAAGCTCAAGATACTCATCCATCATATCATCCGTATCATCACTTTTAGGCTTAGAAGATGAAGGTTCAACTATTGGAATTCATGTTAAAATTTAAAACAAATAAATATTAAGAGAAAAAAAGCAAAATAATATAATAAAAGAGATAAAATAACTAAATTAATAAACAAATAACAATTAAAGTTAATAGTTGGAACGAATGTACCAAACGTCTATGTAAAAGTAGACGTATAACCAAAGCCGGAGTTGATAAATGCCGATTGTAGCTTCGGAAATTCAAACTTCAACTCAATATCACAATATAATAATTAATAATTTATGAGAGATTTATAATTGAGAGTTTGAGACTTTGAGAGATTGTATAAGTGTTGAATTTGTGATTTAAAATGGAAAAAAATGGTATATTTATAGTGTAAATGGGTTAGAAGGGGGTGGGGGTCATATTTGACCGTTTTGGGCCCCAGCCCAACGGCTAGAAGGGCCTAACGGTCATATAAAACGATAACATTAAAAATATAAAAAAAAAATTAAAAAAACCGGCTAAACCGGTTCTTACCGGACCGGAACCGGTTCTTACCGAACCGGTGTTACCGGATAAAAAACCAGGAACCGGTTCGGTACCCGGTCCTGTACACTAAAAGACCGGTTCCTTACCGGTTCAACCGGTACCGGACGGACCGGTACGGGAACCGGATTGGAACCGGACCGGACCGGCCAAAAACCGGTCCATTTGCCAGCCTTAGCCGCGACTAATGACTTGCACTCTTCAATACAATCGTTATCAAAATTCATTATCACTCCCGCTAATGTTTTTACACCTAGACGTTCTTCTATTTGTGTCTTAGATGTCTCACCAACGTTGTAGGATATAGCAGATACCGATTGGAGCTCACCACTCTGCCTCATTGACCTACAAATGTTAAAGGTCAGTTCCTCATTGTTCAATCGAAATTTCATCTGCCCCTTTTCCATATCTACTAAGGCTCTTTCCGTAGTAAGGAATGACCTCCCAAGAATAATGGACACTTCAAAATCAACTTCACAATCAAAGAATAACAAAATCTGCCAGAAATATGAACGACTCCACTTTTACTAGCACATTGTGGAGTATCCCTATAGGCTTTTTTATTGTTCGATCGACCATCAGTAGCCGCATCGCAGTGGGCTTTGGATCACCCAAACCCAACTTCTTGTAAATCGAGAAGGGCATGAGATTTATGCTTGCCCCCAGATCACATACTGCTTTCGCAAAATGTAATAGCCCGATTGTACAAGGAATAGTGGACGCACCCGGATCTTCTTTCTTTTGTACCAGAGATCTTGTAGCAATAGCACTACAATGCTGCATTCTATCATCATGTTCAAAAGTGACCAATTTTTTCTTTGTAACCAAATCTTTCATAAACTTGGCATAACCGGGCATTTGTTCTAGAGCTTCTACCAAAAGGACATTGATAGAAGTTGCTTCAACATTGTTATAAAACGTCGATATTTACCATCCTCGGTCTTTTTCACTAATCTTTGAGGAAATGGGGGTGGTGGTCTAGGCATGGGAGGTACCTTTTTAGGCACTTCAGCACCTTTTCCAGTGCTATCTTCTACCTCTACCACTTTATCAATATCTTTTGTCACCTTTTTCTCATTAGACGGCATAGGTGGATCAATGGTTTGCTTACCACCACGAGTAGTGATTGCCATACAATATCCGTCATTTTTTGGATTATGGACAGTGTTGCTAGGAAGAGTGCCCGGTTGCCGTGTGTTCACAGTCGCAGATAATTGGGCCAATTGTAACTCAAGCTGCTTAATCGATATTGCATGTGTATCGACTTTCTGCCCAATACCCGCTAAATCATTCTTCAACTCTTTAGTGTGCTTATCACTAGCATCGAACCTCCTCCTCATTTTATGCAACATATCCTCAACTCGCGCCATACTACCTCCACTATCCCTAGAAGTAACTTCACGATTTTGAGGAGGAACATAGGGTCCATTCCTATCACTTCTATTACCGTAGTTATCCCTGTTGAAGTTGTTGTCGTGGTTGTAATTTTCTTCTCGAACATAATGACCCTCACAGTTATAGTTACCATAGATCCGACCTTGGTTCCCTTGACCTTGGCGCCAATTCTCCTGATTAGAGTCTTGGGCACTCGGTCGAAACCCCCCTATCTGCTCATTTACCGCATATGAATCCTCCTCATAATAGCATTCATCATTTGGTGGTGGTGGTTTAGACAACTAGTTGACTGCATTTATCTTTTCTGCACCCCCAATGACATGTTTTAATACCAACCCAAGCTCAGTTCTCATCTGAGCCATCTCTTCACGAATCTCATCTGTGGCTGGGTTGTGAGTGGATTGTACTGCGAAGGTATTTCTCCCAGTATCTGACTTCCTAGTACTCCAAGCTTTATTGTTTTGGGAGATTTTCTCTAACTTTTCAGAAATCTCACCTAGTGTTGTGAATGGCGAGTGCCTCATCGCCTTTGGCGAGAGGCGAGGCTAGGCGAGGCCTCCTCGCCATTCCCTACTGAGGCGAGGCGGTATGCAAAAGGCGGCCCATGGCGACCTAATGGCGCTAGAAAAGGTGGCGCCTTTTTTATTTTTTATTTTAAAAATATTTGACTTAACAATATTAGTCAAAATTAGGGTTTTTAAAAATATTTTCAAAACCTGCTGCTGCACAATATTCTCCCCGACTCTCTTCTCCTCGCGATCTCTTCTCTTAGTCTCCATCATCTTCGAGTTGCTGTTGCTGAAGACATGAGGTATACCTCTTTTTTTCTATTCTTCTTCAATTTTCGTTTCAGACTTCCAGATCTGTTTTCTTCAAGTTTTCTTCACTACTCTTTTTTCCCGCTATTTTCTTCACTCTCTGTTTTGTCCCAGATTACTGTAAAATGCCTTCTGTTTTCACTGTGTTGTGAGTCTGTGATTGCTGTCCATTATTTTTTTTGAAAAAAAATTAATTAATTCTTTCTATATTAATTATTATAGTATTTGTAATATATGTAATTGCTATTAAAAATTTGAATATTATATGTGCAGTTAAATATTTTTAATTTTTGGTATTAATTGGCGCCTCGATAAAAAAAGGCGAGCGCCTCGCCGCTCGCCTCGCCGCATGGCGAGGCAGGCCCTTGTCGCCTCTCGCCGTCCAAAACACTGATCTCAGCATAAGGACACTCCCCATAAGAACCACCTGCTATAGTATCCAACACCGCTTTATTATTATTATCCTGTCCCCGATAGAAGTATTCCTTCAGTGACTCATCATCTATACGGTGATTGAGATGCCCATCGGAGTCTGCTATATTGTCATTACCTTTGTAGTATTCTTGGGGCCGTGGAGCGGGATTTTGTCCCCTTTGTTGGTTTTCACTTGGAGCATCGGGTAACAACTGACCATGAACATCAACGGGGCTGGGATGTTCTGGTTTGGATTATCATCATTAATACCCAAGTTTTGATTCATGTTGCGTAGTGTACGCTCTAATTCGTGATCGTAGGGAAACAAGAGTTCTCTTCCTCTCCGTGTATTTGACATACAATGAAGATAGTTCTGCAAGAATAAAAAAAAAAGAAACAAAGTAAAATTAAGAAAATATCGACTAAACTATAGTAATCAGTTTAAGTTAATCTAAAAGCTACTTTCCCCGGCAGCGGCGCCAAAATTTGATACGCTCAAACTTACTTGTCAAATAAGAAGTAAAACGGTCGTATCAAGTAAAGAACCCAACTAATGAGGTTAGGATCGTTCCCACGAGGAAAATAGTTCAGACTTAACTTCAATCTATTATTACTACTATTTAGTCAATTATTTCCTTGGAAAACAAAGACAATAAAAGGGGGGTTTTTATATCTAAATGAATGAACATAACTAGCTAAATTAAAGGATACAACTAACACATTCAAATGTTGGATTTAATCAATTAATAAAAGTAACTAGGGTTTGCTTGTTCCCTACAGGTTCCTAACTTGATAATTCTAACTATAACAATTCTTTCCTAGCATCTTGCATGCAAAGTGATAAGTTATGTATTTCTAAATTCTTGGTCCGACATCTAGAAAATTTCACTCCGCACCTTGGTCCGGCTACGTGTGTTGCTATACTAACCCTTACCTCTTATTAAGCATTGTATTCGATATTTGACTAAGTTATTACCTCGTGCCAATCAATACTAGCCTATTAGATAGTATACACTAAATCTATGTTGATAATTCTTTTTCTATTATCTACCTCCTTGGTTCGGCAAGCAGCATTAAGGCGAGTTCTAACGTTGGTCATCCGTTAAAAATACTTCTAAGCGAAAGAATTATCAATACATGCAAGACACTATTCTAGAATTGTTATTTTAGTTCGAGTTTGTCTTATTACTAGTTCCAGACACGTGCGTTGCACGTGTTCCCCAAGCTAAATTGCATGAAGTTGTTGTAACGATGTGTTTGTATGACCTCTTTAATATTAAAGATGAAGAAACCACAAATAGTGTGAAAGAAAAATAATTATATGTTAAATTGTGCGTACATTTTGATTTAGTAATTTGCTGATAGAATAAAAATAGATCAACAAAAAAATAATTACGAATTAAAATAATTAATTAAGAAAAATATATACAAAACTTTCACATATATAAGAAAATATTAGGAAAAATAGAAGGCATACCACTATATAAGAAAACTCACATTTATAAGAAAACTTTCAAATTTTCTTTTCAAGAAAATCAAAAAAGTCTTTCTTTTGTAATGGAAGATATATGTACGTTTTTCTTGTAAAGACGGTTTAACTTAACTAAGAGAAAAGTAATTAATTAAATTGGACAATTTGAACTTAAACTTCATATTAGAATTAAAATGAATTAAATGAAAGAAAATGAAGGATAGGAATTAAAGTCTCAAACATCTTTACATATTTCACCAGTAGCTAGAGACTTTTAGTAGATGAATATGGTCAATATATTAAATTAAGTGTATTTAATTATTAAGTAACCCTTCAATTTCTTCAAATTTTATAATTTCAAAGAGTGTTATACTCTATACAAATTTATAGGATAATTCTAGTAATCTAACCTTAACTTTGTTGCTTCACACTTTTAATAGAACTAATAATTCTATTTTTACTGTAAAGTTTGTAAAATAAAATAGTAAATCAAGAAAAAGTACTTTAAAAGCTATACAACTTATGTGGTTATCAAATCAAGAACAATTATCAACCATGCAAAGACTTAAATCATAAAACTCAAAGTCTTATTGTGTACAATAATATTTTATATGTAGTTATTTATTTATCAAATAGGAAAGAAAATAGAAATTCTTTAATGGTAAATAAAAGAACACCTCTAAGAATCAACAAAAATATTATAAAATGAGGCTAAAATTAACAACGTGAAAGAAAAAAGTAGTAATAATGTGAAAGAAAAAGAGATGACAACTTTCTTTATTCTCTTCCAATTATTCAAAATCTCTTCGATAGGATACAATTGAGGGACTCAAAGAATTGTCATGAATATGTCATTAACCCATTTCATGGATGAAAGGTGAAAGTAACAAGTATATTATTATGAACATCAACAAATGTATAATATCTTCATTTCTAATATAATAACACAAAATAAAAATTCCACTTGAACACATAGAAGAAAAATCTTAGCAGATCTTAGTTAATCTACAATAAAATTATCAAACAAATATTAAGATAAAATAAATGAAGAGAAGTAGCTATCATCAAAACTAAGACAATATATATCATGACATAATTTACAGATCGAAAAATTAGTGAAGCACACAATGATATTTATAGCCAAGATATATAAAAACTCAAAAGTCAAGTTAGAATAAGATCATTAAAATATCATTAAATCTCTTTATTAAAGAAGTGAAAGGACACTTTATATTTTATTCGTTAAAAATGGTTAGATTTCCAAAACTATTAAAATCCAAATTCATAGTTATTCTTTAAAGTTAAAACGTATGACTATAGGTATTCAACATATGTACTAATACACATAAAAGAACATGAAGAACCAATTTTGAAACCGTTAAAACATTTATTGTATGGTAGTCAATATGATACTTATCATTTATTTAAACATATATTTACATTTTTTTTACACAAATTATTAAAGAAGTATTTTCTTTATTTAAAGATAAAAATGTTTAATTAATTATATTAGATGAATTTAATTAAATATTTTATAACCTTTTCATTTAATGTAGGGGTAAAATGGTAATTTAACTTTTAAGTTTTGAGCTTCATGCTTGTAATAATATATGATTTACCCATGGTTCCCACAACCCTAGTTATGGAGTTTAGTTATCCATAGTCATAATCACAATATTCATATATATGATATAAGAATTCATGCACTTACTTCAATGAGAAAGAATAAAATCAAGAAATTTACTTGATTAATCGACAAAATCACCAACAATCAACTCCAGAGAAAAGTGTAACAATCCATAGTGTAATAATTAGGCCTGGGCGTTCGGTCAATTCGGTTCGGTTCGTAAGTATCAGTTCGGTTTTTTGATTTTCGGTTTGGCCAAATATGAAACCAAACAAAATCGAAATAAATTCAGTTTGGTTCGGTTATTATAAATTCGGTTCGGTTTATTTCGGTTCGATTTCGGTTTAACCATATTTAATAAAAAAATGGTAAAACGGCCATCGTGATAACTAAATATCGACTCAATCGATAATAATAAAAAAACTATGAAAAGTCAAGACTCAAGACAACATCACAACAACACTAGAAAGAAATTTCAACAAACTTGTGTCCATCACTAAAATAGAGTTAGTTACAAACTAAAGTCATCATTATCTGTCTCATTAAAACTTCCAGCAACAAAGAGATTTAGAAAACAAACAAAACATCGTTGCAACTTGCAACCTCCATTGCAATAGCTCCCATGTTCTAGCATATAGCAACCAAGAAAATAACAAAACATTGATGGACCTGCGAGAAAACAAATCTGTTCAGACAAATGATCTACATTTCATAATAGAATATATAAAACTATCAAGCAAGTTATGTAAATAAGTTCTTTACTTACTCGTTACCGCACATCACTAGTTGATAGTTGAACTTACAAGCTGCAACTATATATCAATTATACTAGATTCAGTCCCACTACAAGCAAAATCTAAAAAAATATGAAAGAATTTGTTAGTTGTTAAGAAACACAACAAAATTATTTTCAATATAGTTAATACAAATATCAAATTCTTACCAAGTTCAAGATACTCTAAATCTTCCTCAATATTGATTGGAAAAGACTCACTTGTAAGCCAATCTTGAACACAAATAAGAGATTGCACAATTTTAGGAGTTAATGAACTCCTAAAGGGATCAAGAACACGACCTCCTGTGCTGAATGCACATTCCGATGCGACACTTGAAATGGGAATGGCTAACACATCACGAACCATCTCCGCGAGAATAGGAAATCTCGACTCATTAACTTTCCACCACATTAATATATCAAAGTCATCACTATCTGACTCAATATCTTCCGCAAGATATCTTTCCAATTCTGATTTATTACCTGAACTTCCACTAACTTCTTTATGCTTCTCAAATTGTTGTTTCGTTCTCAATCTTCCTCTATTTGCAAAGTTGCCACAACCACTCACACTAGATATACTTGATGAATTGTCAGACGAAGTGGGTGAAGATGGTACATGTAAAGAGCTTTTTGGGGATTTCTTGACAAAATACTCGAACAGTTTGTTCATGTATTTTTTCACTTCTGAACATAGCTTTTCCCCAACTTCTTTTCCAAACATGTCCACAATTGCAAATGGAACATAATCAAGCTTGTTATGGGGATCCAACACAGATGAAATAAAGATCATTTTGTTCATTTTTTGTGGTTCACCCCAATACTTTTTGAACTTCTCATTCATACTTTCCGCCATTTCTTTCAAATTACGATCTTCATTTGTCATCATCTCTTTCAAAATAAGATTAAGTTCAGCAATTTCAACAAAGTGTGTATTGCTAGTGACATAATTAGAACCAGAAACCTTCAAAGTTAGTACATAAAAAGTTTCAAGAAATTTCACCATTGACCTCACATTTTTCCAGTCAACACTTGAAAGAATATTTGCAATAGTTCCATCTTCAACACTAAATTCATCTTCAACACTAGTTCCATCTTCAACACTAGTTCCATCTTTGTTTTTAGAAGAATCAGAACCAAAGGTACGAAGATGATTCAAGTATCCAATATCATAAAAACTATATCTTTCAAATGCAAGCTCAAAATGTTGTGCTATATCAAGCATCGAATATGTAGAGTTCCACCTAGTAGGAACATCTAAACATAATGATTTCTTACAAGTTATCAATTCAGATTCACAACATTCTTTAAACTTTCTAAGTCTTGCGGGAGATTGTTTAATGTATTTCACGGCTTGTCTCACTAGCCTGACAGACTTAAGGATATGTGCCATACACCTCACATGAAGATGGTCACCATCCATAATGTTAGTTCCCCAATTGCTCAATTTTTTAGACATTTCTTTCACAGTAACATCATTAGAACTAGCATTATCAACTGTAATAGTAAACACATTATCCAAACCCCATTCAAGCAAACAATTAGTAATGCAAGCCGCCATATCCACGCCCTTATGACTAGAAATAGGACAAAAATTTATTATTCTTTTATGCAGAATCCAATTTCTATCTATAAAGTGGGCTGTCAAACACATGTAGTTTATTTTTTGTATAGAGGTCCAAGTATCTGTTGTAAGACAAACTTTTGGACGTGCTTCTTTGAAAACCTTCTTCAAAAGTTTTTTTTCTTCAAGGTATAATTCATAACAATCTCTCATCATAGTTCGACGAGAAGGAATATGAAATTGCAGCATTGTAACTCTCATGAAGTTTTTAAACCCCTCTCTCTCAACAAAACTAAATGGTAGTTCGTCAACAATTATCATTTTGGCTAAAGCTTTCCTACTTTGTGCTTGGTCAAATTTCCAAGTGCTAATGACCCCTTCTTTTGATCCCGTTGAAGATGGTAGAAAATTAATTAGATTTCGACCTTTATCTACGGTGTCACGAGGAAATTTAGGACATGTTCTCAAATGAGTATTCATTGATGACGTACCATTAGATGATGTAGAAGCTGTATAAGCTTTTGCACAATACTTGCATTTGGCTTTACTACCTTCATTTTCATCAGTGAACTTTTCAAAATGCTTCCAACAATTAGCTCTAGGTTCCATGATTTTTCTTTTCTTTGAAGTATCAACATCAACTTCAACCTCACTTGGAGATGAGGTATAAGGTATGTTCTCATTTGAAGCTCCACTTTCACTTCCCTTACTTCCAGTTTGTGCCATCTATACAAAAGTGAAACAAACAACAAGAACAACAATCAATATCACACAACACTTTTTCACTACACAAAACTCCAAAAAAAAAATATTACCGACACTATTATTTTAATCTATATGAGTATTGAAATTTTCTTTATCTATGGTAAATCATAAATAATCATTCTAATTTTATAATTGTAATTATTAATTAAAAAAAAGTCATAAGATAAAAATCATTTAGTATTAGCAAATAATGGAAAAACAAAAAAATCATACAATTAAGACTAACAAAAATAATGATTTGCAGAGCACAGAAAAGAAAAAAGTATTTTCACAAACTTGGTTATCTTCTTTCTTTCACTACTACTACTACTATTATTATTATTATTATATTTTGGATGTGTTTTATAAAGGCATAATAAACTTACGAGTGACGAAAACGAGAGATGAGAGTTGAGATGAATGAGAGGGGTGGTTGTGGGCCTGTGGAGAGCCGGCGGGCGGCGATTGACGACTGGCAGTGCTACTGGCTGCTGTGGCGGTGGCCTGGGTGGCGGCTGGCGGCGTGGGAGTGGCGACTTGCAGTGTGACGGACGGACGAGTTGACGACGGTGGACCGCGACGGTGGGTCGGACGTCGGTGGCAGTGGACTGGTGTTTCAAAGAAGAAGGTTTCACTTTCAAGTTTCAAAGAAGAAGTTTTGACTTTCAGACTTCATTGTTAATTTAGGGATTTATTATTTAGGGAAATTGGCTTGGGGATTGGGTATTGGGTAATTGGGTTATGGGTATTTGGGTTATGATTTAAGAATTTGAATAATTGGGCTTGGGCCGAGTAATAAAAATTTATGTAATTGCGCTTGGGAGGATTAGAATGTAGGAATGGGTTATGGGGTAACAACAAATAACAAATATGTATATATTTATATAATTTCGGTTTTTCGGTTAACCGAATTTTTAAATTTAAAACCGAAAACCGAACCGAAATATCAAAATTTTAAAATTCAAAACCTTAACCGACCGAAATAACCGAAAAACCGAAAAGTGTCTAATCACCAAAAGTCTAACCCCAAAAATAAGGTTTTTCGAATTATTTATAAAAAACAAAAACCTAATAAAAAAAGGACTATAATTGCTAGAAATCTGTCAAAACGCGGCTGGGTCGACGGACCTCGTGACGAGTCATCGTGGATTCCGTCGTCCCATACTTTGCAAATTCTTCTGCTACTCTCTTCATTACCCTTGACGGTAGGTATGACAGATCGTCACAGGCACAATGGTCTGTCGAGGATCTTCGTTCCATAACACTTAAACTCTTTGGAATTTGGGTACTGGACTACTTCTCTGATCATCACGATGAACCAGCCAGGACAGACCGTCATGGCTACGACGGTCCGTCACGCATTTCGTAACCCCACACTTGGTCAGACTTTCTCATCTTCCTTCAGCAGCTTCACTACGATGCCACCTACGGACAGTCACAAGCTCCGTAGGTGGTACTTTTCTGCATTTCTTGCTCAAAAACTTCCGCGTTCATCTTTAGACAAATTTCCTGCAAATAAAGAGAAACTTACATAAAAATTAATATAAAAAGACTTTTGGACATACACTAAACTTAAAGAAAAACATTAAAAATATCGTGAAACCACGGTATATCAACACCCTTAACTTAAATTCGTTGTTTGTCCTCAAGCGACGCACTATGACTCACTACAAAATCTTTGTACAATAGTATCCATGTTTTATCTTTCGCTATCAATCCCGATTAGTCTCATCATATTTCTGCATGTTATCACTATTAGGCTTGAATTATGTGGAATTAGACCATGACACAGACTCACCACACACTAACACCTATCCTCTTTAATTTCTCACCGAGGTGTTAATATTTCCGGTAGCAACTAGTGTCCTCACTTCAAAACAACATCCTCATTTTTCACACAATGATTTCAATTTGAGTATAAGGATTACTTTTCAACACTCACTCTCAGAACAAATTGACAACTCATTCATACATATTGCCATAAGCTTGCCCTTATTTTCACTGCTTTAAGTTCACTATACAACTCTTAGGATCACGATAGGACTTTCTTAGCTTGTAACATAGGCTCAGGGTCAGGTATATTTAGGTATACTTTAGTGATTTTTTGCCCTCCTTGACATATCGGCCAAACATACCACTTTTTATCATTTTATTTCATCCAGTTTCTCATATTTTTTCACCTTGCTATTTTCCCTTCTTTCGTTATTTGTGTAAGTGATTCTCTTCTTTTCTTACTTGTATTTATTATATTTTTTTTATTTATTTCACTTTTCTTTCAACTGATTCTTGAGTCACTTTACTTTTGTTCTTTCTCTCTCTTTGTTCTTTCAACCTCACTTTCCAGAGCATTCCTCATAATGGTCACCCTCAACTCATGGCTTTGCCATGAGTCAAAGTACACAATACCCAAAGTTGGGTCAGAGCCATAAAAAATTGCTTACTGCATTAGCCACCCTCAACTTATGCTTTTGGCATAAGCTGAGGTGCACATGTCCAAGGCCAACACATAATTCCCAATAAAGATCAGTTGGGGTGAAAAACGAAGGTCTAGTTTAAGCTCAAATCATTTGGATCAAAGAAGGATTAATTTTATTTTTTTTTAGGCTAAAAATGTGTTATATATTGAACAAGGGCTTATGATCATTTTCTAATTGTCTATTACAACTTACTTTTAGCAGGACTAACCAGGCAAGTTCTAGCTCAGTACAAATAGTGGACTATTCAAATCTTCCTCACACTCACTTGACATCTCGTTACTCTACCAGATTATCAGACACCTAGTTCGAATTTTAGACTTAGGGTCATGAAGTGGTGTAGTGTATCTCTATGTCATGCTTAGAGTCACACATTTATCAATTACTATGCCTAGTCATGCATCATTTTCATTTCATCGGGATATCATTTTAGCCATCAAGCTTCAGAGTTAAACTATGTATACAAGATATAGACATGCCGGTTCCACAGTAAAAATAATCAGTCTCTTGGGGAAAAAGAACACAGGCAAGTAAAAACCCAAAAGAGGATAGTGAATTGGGCTACTCAGACTTCACCCTAGCACTCACTTTCCATTTACCCCACCCCCAACAAAAAGACATGCAATTGTCCCCAATGCATAAAAAAATTGAAATACCAGAGTGGTAGGTGAAGCAAACTTGGGGCGCAAAGCGCCGACGATCAGCAAGCTGGTGGGTCCGGTTCACCGGAACCCACTACCTCTGTAATCTGGACACCCTCAGTAGTGTCCTCATCAGCAACAACACTATCAACAGTGCCTCCCGCCATCACCACATCTCTGAAACTAGATGCCCCAGCAACTGACTCTACAACCCTCATCCGACGCGCCTCCTCATCAGCAAGCGAGGCTCTTCTCGCAGCCTCCATCTCACGACGCTCTTTCTTCCGTGCTCTAGCCTCATCCTCCTCTCGACCCCTACGCCTCTTGGCATGCTCTCGAGGGGGAGGTGGTGGAATCTCAAAAGTGGCGAATAAGGCCGCAATCACTGTGTCCTTAGCAGGCTCTGCAGAAGAGGCCTCAGACTCAAGCACCCTAGCCTCTAGGATCATATCAATGTCTGCTCGAAGACTCTCGACCGCAGCCTGAAGGGTCGACACATCCACCTGAGGGGCTGGCTGGGCTAGCACCTGCAACTCGAAAGCGTCCAAGCGCTGATGAACCTCAATGATCTTTCGCTCTGTGTGCTGGACCATTCTCCTCTCCAAGCGCTCTTCTGCCTTAGCAATAAACCTCTGCATCCAAGGCTGGATGTGATGCAAAAGAGTAGCCATCTGTGCCTCTAGTTTCTAGACCCTAGCAAGCGGGACCAGAGCGGGGAAAGGGGCTGAGCGAGAGGAGCTCGGGGCAGTGCTACTACCCGGGATAGACTCGACCGGGGTAGTGTCAGTGGTTCCAGAAGCAGCCTGCGTAGCCGTGCGAGCCCGTGCCATCGTATCAGCCAGATTGTGACCAAGTTAAGGCAACTCTAAACGAGGCCCTCTGCGAGGAGCGAACTCATTGGCCTCATCCCTGATGAGGCCGATATCGACAGTGCCTAGCAGAGTTTTGAGCTGATCAATGTGTCAGATGGGCACACCTGCATAAAGAAAATATCATGCACGGAAAAAGGTAAGTAGTTGTGACCTTAAAAGTCCTCTCGTGCATGACCGCCTGTAGAAGCCAAGCAAAGTCCACCTCAAACCTGACTATCATCGCTGCCATCAGAACTGCACGATTTCATGTGACTATATTATCAGCGGTTGTGGGGGAAAAGCAGTGGCGGACAATCAACCATAAGAACTTAGCCGTGAGGGTCATGTTAGCCTTCTTGATGGCTCCCTTCGGCTCCATTACCCAGTCGGCACCCTCTCTATCAACAGACAAGTGCAGGGCCATCCACTTCTGGCTCACGCAAGAATTGGCCATCTTTGATAATTTGCCACCGGTAGTCAAACTCGGCGGTGAGAGGGGTCGGATTGGCATCAACATCCTCGCCGTATAGATACCGGCGGATGGCAGGCAGGAAGATATCGACCTGAATGCCACGTACTCGGACATGCTAAAGTGGGGCCTGTTTGGCGGGGGCAGCCCGCCTATCAATCTGTGATCTGAGAGTAGCCACGTAGGAGGCGTAGAACTCTCGGACCACTTCACTATAACGGCCCAAAGAACGCGCTCTCCACTCCAGTCGGTGTCTGGTGAAGAGATTGTGGATCTCTTGCATAGTAGGGAGACTTCCCGTAAGGACCCGCCTCTCCAATGTAAGGGTCCGTCATGACTCCTTTCTCATTCAGAAATTTTGCGTCTGAACCCCACACTTGGTTACGACTGTCCGTCACGCACTTCGTAACCCCACACTTGGTCAGACTTCCCCATCTTCCTTCAGCAGCTTCACTACGATGCCACCTACGGACTGTCACAAGCTCCGTAGGTGGTACTTTTCTGCATTTCTAGCTCAAAAACTTCCGCGTTCATCTTTAGACAGATTTCCTGCAAATAAAGAGAAACTTACATAAATATTAATACAAAAAAGCTTTTGGACATACACTAAACTTAAGGGAAAAACATTAAAAATACCGTGAAACCATGATATATCAGCCCCCTAGCATGTGAATATTGAGCAGTCATGGCCGTGGTACCAATATGATGTTAATATGGATACTAGGGTTATGCTTATGTGGGATGTATTATACTGTTTTTGAATAGGAAGATTTTGATAAGTAGGGGCAAAGCTACCATTTGGATATTAGATTGTACTTTTGCTTTTGTCATAAAAAAAAGACTTTAGTTTTGCTTATGTTAGTTTTCTCATCAGAAGAATACATCAATTAGTGATTGTAACAATAATAACTAAAGGGTGTATATGTCAAACAAAACCGAATAAATAAATATACTAACCACCTTATTGTGTTATCAGAAGAATATATGTTTGATAAACAGGATATTTCTCACAAGAAACAAAATCATGATGAAGAACATAAGAAACAACATATACTGTGTTTCAGGCATATTTTACCTTGAACAAATAGGAAACTGATAAACGGTCTATAATGTGATATCCGTGCTTTGTAGAGTATCATTTCCCCAAATATACAAAATGACAACCATTTTCACCTATCTTCACATGATCTTTTAATTTTACTTCATTTTGTGCAGTCTGTTGTCAGTTCCAATATTTAATGAAGTTACTTTGCATTTCTGTTCAGTATAGCTATTTGTTTTGATTTTGTCTTGATATTTACCGTCTCAAGTACTCAAGCTGAAAAAGTCACCTCAAATTTTGTACAAACTGATAATTTTAATTGCAGGTGGACACTAATCTGAAATCACCAGATGATTTTGTTACTGAGGGAGTGTCTGGTATCCGTGAAACTTATGATATTGCGCCGTACTCTGCTATCCTTCTTGAAGCAAAGTAATAATTACCGGAGTTATGCTGCTTTGGATGTTGTTCATG-TCTATTACACTATTACGTCCTTCTGGATTGGATAGTTAAAATCGAAATTCAGGTGCTAATATAAGCATATAGTTAGCATATAAATGTAGTATTTTGAGCAGAAACTTTGTGATGACCAACCAGTTTGTTCAGGCTGCCATTGACAGGTGCCAGGTTGTTTGAG</genome_strand>
        <mrna_strand>CACAGATTCTCTTCTCCAAAAATAGGGCCCGATGATTAGAGGACCACCACAAATCGTCCAGAAATGTCCAACCGACATTGTAACAGTTAACCGGACCAATATAGTTCCACGAACGCACCGTCACGCTCTTCAAGATCTCCGGCAGCTTCGCCGGCGTGATAGTCTCAGGCTCTTCTCCTCTGATCACCGGATTCTGAAGTTTTGTACATCGGAGGAGGCGTTCCAACCTAGGTTGGTCGCAGCAGCTAAACTTCAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGAAGCTCCTCAAATGCTGGACACTTTCCCTTCATTCAAAGTTTCCCCTGGTCTGGCTCATCCACTAGGAGTATCAGAAACTGAAAGTGGAATAAATTTTGCAATTTTTTCTCAGCATGCTTCTGCAGTTACACTTTGCATAATTCTTCCAAAGAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTCATGATGGAATGATTGAATTAGCATTGGATCCACAGAAGAACCGCACAGGAGACATATGGCACATATGCATTAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTTGCCCCAAGGTGGTGTCCTTTATGGTTATCGCATTGATGGACCTCGAAATTGGCATGAAGGGCATCGATTTGATGATAGCATTATTTTGGTTGATCCTTACGCAAAACTAATTGAAGGTCGACGAGTTTTTGGAGATGAAAGCAATAAAATGTGTAGATTTTTTGGAACTTATGATTTCAATAGCTTGCCTTTTGACTGGGGAGAAAATTACAAGCTTCCAAATATACCCGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGATCTTGTTATATATGAGATGAATGTTCGTGCTTTTACTGCTGATGAAACAAGTAGTTTGGATCAAGATCAACGGGGAAGTTACCTTGGCTTAATTGAAAAG...........................................................................................................................................................................................................................................................................................................ATACCACATCTTCTCGAGCTTGGTGTCAATGCAGTAGAATTATTGCCTGTTTTTGAGTTTGATGAACTGGAATTACAAAGGCGACCTAATCCGAGAGATCACATG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAATACATGGGGCTACTCAACAATAAACTTTTTTGCTCCAATGAGTCGATATGCAAGTTGTGGTGGCGGACCTGTCCGTGCTTCCTGGGAGTTCAAAGAAATGGTCAAGGCCTTGCATGGTGCTGGAATTGAG............................................................................................................................GTCATCTTAGATGTTGTTTATAATCACACAAATGAAGCTGATGATGAAAACCCATATACAACCTCATTCCGAGGAATAGACAACAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTATTACATGGTAGATTTAAACAACAATGCTCAGCTGCTGAATTTCGCTGGATGTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAATACTTTTAACTGCAACCATCCCACAGTCATGGAACTTATACTTGAAAGCTTAAGACACTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTCACCGAGTATCATGTCGATGGATTTCGCTTTGATCTTGCTAGTGTTCTTTGCAGAGGGACAGATGGTACTCCCATTAATGCTCCCCCCCTTGTTAAG......................................................................................................................................................................................................................................................................................................................................................GCCATTTCCAAAGATAGTGTATTGTCGAGGTGCAAAATTATTGCTGAGCCATGGGATTGTGGAGGCCTATATCTTGTTGGAAAGTTTCCGAACTGGGACCG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGGCTGAGTGGAATGGGAAGTACCGCGATGACATCAGGAGATTTATAAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGATGCTGGCATGAAAGGAAATTTTGCAACCCGTATCGCAGGTTCAGCGGATCTGTACAGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAACAAGCGAAAGCCGTACCACAGTGTCAACTTCGTGATTGCCCATGATGGCTTTACCTTGTATGACCTTGTTTCATACAATAATAAG...................................................................................CACAATGATGCAAACGGTGAAGGTGGCAATGATGGATGCAATGACAACTTCAGTTGGAATTGTGGAATTGAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAAACTTCAGATGCAAATATTAACGCACTGCGTTCACGGCAAATGAAAAATTTTCATTTGGCACTGATGGTTTCTCAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAACACCAATGATGCTTATGGGGGATGAGTATGGGCATACCCGCTATGGAAATAATAACAGTTATGGACATGATACCGCCATCAACAATTTCCAGTGGGGACAA..........................................................................TTGGAAGCAAGGAAGAATGATCACTTCAGGTTCTTTTCCAAGATGATAAAGTTTCGACTGTCCCACAATGTTCTTAGAAAGGAAAACTTCATTGAGAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGACATTACCTGGCTCGAGGACAACTGGTACAATGAAGAGAGTAGATTCCTTGCATTTAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCCATGATGGGAATGGAGGAGATATTTACTTGGCATTTAATGCACACCACTTCTCCATCAAAACAGCAATACCTTCACCACCACGAAATAGAAGTTGGTACCGAGTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGACACTAATCTGAAATCACCAGATGATTTTGTTACTGAGGGAGTGTCTGGTATCAGTAAAACTTATGATGTTGCGCCGTACTCTGCTATCCTTCTTGAAGCAAAGCAATAATTACCGGGACTATGCTGCTTTAGATGTTGTCCATGAGTTATTACAGTATTACCTCCTTCTGGATTGGATAGTTCAAATCGGAATTCA-G-GCT-GT-T-AGCCTATAGAT..........................................................GTTTGCAAT-A-AGCAACCAGTTTGTTCAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E423585" ref_strand="-" ref_description="SGN-E423585 [STM-42-A24]">
      <seq>gaaataataacagttatggacatgataccgccatcaacaatttccagtggggacagttggaagcaaggaagaatgatcacttcaggttcttttccaagatgataaagtttcgactgtcccacaatgttcttagaaaggaaaacttcattgagaagaacgacattacctggctcgaggacaactggtacaatgaagagagtagattccttgcatttatgctccatgatgggaatggaggagatatttacttggcatttaatgcacaccacttctccatcaaaacagcaataccttcaccaccacgaaatagaagttggtaccgagtggtggacactaatctgaaatcaccagatgattttgttactgagggagtgtctggtatctgtgaaacttatgatgttgcgccgtactctgctatccttcttgaagcaaagcaataattaccgggactatgctgctttagatgttgtccatgagttattacagtattacctccttctggattggatagttcaaatcggaattcaggctgttagcctatagatgtagtatgttgagcagaagttttgcaataagca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="37700" stop="17752"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="37400" g_stop="37345" g_length="56"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="56" r_length="56" r_score="0.982"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="37344" i_stop="37271" i_length="74">
            <donor d_prob="0.884" d_score="0.98"/>
            <acceptor a_prob="0.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="37270" g_stop="37172" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="57" r_stop="155" r_length="99" r_score="0.960"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="37171" i_stop="36340" i_length="832">
            <donor d_prob="0.968" d_score="0.94"/>
            <acceptor a_prob="0.713" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="36339" g_stop="36278" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="156" r_stop="217" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="36277" i_stop="35281" i_length="997">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="35280" g_stop="35172" g_length="109"/>
          <reference_exon_boundary r_type="cDNA" r_start="218" r_stop="326" r_length="109" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="35171" i_stop="18259" i_length="16913">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="18258" g_stop="18058" g_length="201"/>
          <reference_exon_boundary r_type="cDNA" r_start="327" r_stop="528" r_length="202" r_score="0.920"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E423585" ref_strand="-">
        <total_alignment_score>0.960</total_alignment_score>
        <cumulative_length_of_scored_exons>527</cumulative_length_of_scored_exons>
        <coverage percentage="0.912" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E423585" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="37400" e_stop="37345"/>
          <exon e_start="37270" e_stop="37172"/>
          <exon e_start="36339" e_stop="36278"/>
          <exon e_start="35280" e_stop="35172"/>
          <exon e_start="18258" e_stop="18058"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAATAATAACAGTTATGGACATGATACCGCCATCAACAATTTCCAGTGGGGACAAGTATGATATTATGTTTTCTTGCTTGTACTTCTTTCCTGCTACTGCAAGTAACCCAGTGAACTTTGTCAATCCAGTTGGAAGCAAGGAGGAATGATCACTTCAGGTTCTTTTCCAAGATGATAAAGTTTCGACTGTCCCATAATGTTCTAAGAAAGGAAAATTTCATTGAGAAGGTAATGCTATTGTCTACCTGGTGTCATGCTTAACTTTACTGGCAATTGTATTACTAAGAGGTAATTTATTTTGAAAACTGAATGTTATGTTCTGTGTTTCATTTGTGGCAGTATCTTTGTCTTTAAATATTAATGCATCAGAAAAAGCTAATGAAAGAGTTCCCTGCAAAGAAATGATACCGAGTATGTGATCAAAACGGTAGTATTCCTATTTAGACCTTCCGTTTAATGGTTGGTGCTGGTGTAAGATAACCTGGGGGTACTCCAGGTACTGATCTAAGTTGAATGGTCAGAGTATTTGGGGTTCTCTTTGTGGAACATACTTAAATGGTGTTTCTTCACATGATATACAGTTAGTTTAGGTTGTCTCATCTATGATCCACTGGTCCATTTATTCACAGTATCCTTGTCAATGATCATATGTTTGGAAGATTTGATAAATGTTAGACCCCTCAACTACTGATGGTTCTCTTCAAGATGTTTGAGATTTTTCTAGCTATTTGAATCGTTTGGTGCCTCTGATTTTTCCAAATAGGTGGAAAGAAGCAAAAATTTGATCCAATAGGTGGAACTGTATATTGATTCATTTCTAATACATTATGGGTATTGTTTATCCAATGGGGGGAAGAAGGACAGAATTGATCTAATAGATGTAAGGAGGGCAGTTTTTTTAGCTATTTCAATGTTACGTTAAGGGCATTTTTGACCCTTTTCTGTTTTTTGTTTTTTTGGGTGGCAGTGGGGTTCCATTGTAGTACTTAGTGTTCTCTAGCTCTGCATAATGCTGTCTCAATTCGACTATTCTGATGGATTAGCAATCATTACTTTGCAGAACGACATTACCTGGCTCGAGGACAACTGGTACAATGAAGAGAGTAGATTCCTTGCATTTATGTAAGAATAAACCCTATTAATAATCTCCATCTTATCATCTCTGATTCTAAATCATGAATTCACTCACACACTAGAATCAGTCCTCTTTTTAGGCAAGTTTTTGTACGGATTGCCGCTATTTTGGGGTGGTCTTTAATTTTTACCCCTACTGCTCATTCAATGAAAATTTGTTGTCCAAAGTACCCTTAACTATGACTTAATTTCGCCGGAAAACCTTTTTGTATAATGTTTGCCCTAGGGCATCAGCTCAGTGCTATCAAATTCTTAAGGCAAACTTTATGCTTAATTTGTTTTAAAAAAAATTGTTAGGCATAGGTTATGCCCTATTAGGCACAAGTTCACACTACTGAACTTATGCCCCAAGACATAAGTTCGTGTATGAACTTCTTAAGGCATAATGTTTTAAAACCGAACTTATATCTCAAGGCACAAGTTATGATGCCATACAAGGCATTAGTAAAATTTTAGAACATTATGTTTTACTAGACATAAGTTTCGTGTTTGAACTTTATGCCTTAAGAAGACATATGACTGAACTTGTGCCCCAAGGCATAGGCATAAGTTATGCCTAAGGCAAAATAAATTTGCAAGGCATGGATTATACCTATAAGTTGTAAAAATGAACTTATGTCTTATAGGGCATAACCCGTGCCTAGTAAATTTTTATTATTAGGGGTATTTTCGTCTGCCGTTTTATTACTTTAAGTTCTGAATAGAAGATACTAGAAAGCCACGAATTTGAGTGAAAGAAGTTAAAAAACTACCCAAAATAGGGGCAATCATGTGAATGATCCTTTCTAAAGCTGTTTTCATATGGTCTGTTTCTTTTACACTGAGCTTTTTCGTGTTTTTCTTCTATCCCTTAATTTTCAGTTGCACCTGTGTTCTTGATTTTAATTTGTCAACCAAAAATTTTAATGTGACAAGCTCAAAATTTAGGAGCTTTTCTTTTCGCATGAGTGAATTTGCATATTGGATTCTCTTTTGTACAATGTAGGCTCCATGATGGGAATGGAGGAGATATTTACTTGGCATTTAATGCACACCACTTCTCCATCAAAACAGCAATACCTTCACCACCACGAAATAGAAGTTGGTACCGAGTGGTAAGCTATTCTTATTATTATTTTGTTTTTATTTTTTTTTAAAAACAATTACCCCTCCCTAGGAGCTCCACCTTATTGTCCTGTTATTAGTTAAAGGAATGCACTTCGTTTACACATCCAAAACATGAGATAGCCTCTGATTTTGCTCCTGCTCTGATAGTTTGGTTATTCTTTCTTGTATTTTGGATTTGTGCCTACTGATTTGGAAATTATAGGTCGAAGACAAAGTGTTGTATTATATCCTCATGTTAACACCTTATTAAGCGTCTCTAGTGCTCAATACTTGGCTTATGACCGGGCATGAGTTGGATTTTATGAGAACAAATACCAGGAGGGATTCCAATAATGTCCGCAATAGTCCACCCAATAGCTCTTTTGAACCTTTTTAGCACTTTCACCAGACTCTCAACTTGTTCATTCAGGTCTGATGCAATGATTACCGGCAAAGTGTCACCATTTCCTAAGAATTCATACCTGAGATGAGGTGGGAGAGCGTTTAGTTCTAACCTTAGAGCCTCCTCTATGGATAGTTTCGTGGGTGGAGACTCGCGATTCTTCATATCTAACTCATATTTCTTCGGTTTAAACCGAACATCACCTCGATCAAAAGCCGCGACTAAGACTGGCAAACGGACAGGACCGGGTCAACAGGACCGGTTTTATCGGTAACTGGACCGGTACCGGTTTTTTCTTACCGGATTTTACCGGACCGGTTTTACCGGAAAAGTCTCCCTGTTCCGCTCGATCCATTAGTAACCGGTTTGGAACCGGGTTGGACCGGTTTGGAATCGGGTCTTACCGGTTCTTCCGTTTTTTTTAAATTTTAATTATTTTAATTATTATATAATATTATATATTTATATTAAAACTTCAATTAAAAACTTTAAAGTTTATATAAGTTTGAAATTAAATTTATACTTTAAAGTTTATATTGAATTTAAAGTTTCAAATTGAATTTAAATTTTTATATTGAATTTAAAGTTTTTTAAACTTTATATTGAATTTAAAGTTTGAAATTAAATTTAAACTTTAAAGTTTATATTGAATTTAAAGTTTAAATATAAACTTTTATTAAAATAATTAAAAATTAAATTTATAAAATGACATGAAATAAATAGAAGAGACTATTATAAAAAAAAAATCAAGGCGAATAGCCGTATATTTATTCAAATAAATAAATTATACAATACAAATATTAGAAAGAGAATAAGAGTACATAATTTAGGAGGAATTGAATAGTAAATTAGTAATTATTATACTAACAATTCCATTTTTTTAAAAATTCTTTTTGTAAATTTTGTATCATTTGAAAAGAAAGATTTTTTGGAATTGGCATTTGTCGTTCTTCTTCCATTGCTTCCATGCCATCATCACTATTCTCACCAAATATTTCATCTATTTGGTCTTCTATATGGCTACTTAATAGTGGTAGTCCGGTGTTTCTTCTTTCGGCATTGACCCAATCTCGAAACAACACCGATATTTCCAAACTGTCCTTTGCTAATGAATATCGATGATCTCCAATCATAAATCTCGCTGCACTAAAGGCTTGCTCCGAAGCGACCGATAATGCTTGAATCGCTAGCACATCTCGAACAATCCTAGAAAGGGTCGGAAATTGTTTTTCACGATTCTTCCACCAATTTAATATTCGAGGTTGAAGTTCTCCTTCGTCACGCCTAATCTTTTCCCGTGCCTGGTTGAAATATAAATCAAAATCATTATTAGTTTCATCACTTTCAAGCTCAAGATACTCATCCATCATATCATCCGTATCATCACTTTTAGGCTTAGAAGATGAAGGTTCAACTATTGGAATTCATGTTAAAATTTAAAACAAATAAATATTAAGAGAAAAAAAGCAAAATAATATAATAAAAGAGATAAAATAACTAAATTAATAAACAAATAACAATTAAAGTTAATAGTTGGAACGAATGTACCAAACGTCTATGTAAAAGTAGACGTATAACCAAAGCCGGAGTTGATAAATGCCGATTGTAGCTTCGGAAATTCAAACTTCAACTCAATATCACAATATAATAATTAATAATTTATGAGAGATTTATAATTGAGAGTTTGAGACTTTGAGAGATTGTATAAGTGTTGAATTTGTGATTTAAAATGGAAAAAAATGGTATATTTATAGTGTAAATGGGTTAGAAGGGGGTGGGGGTCATATTTGACCGTTTTGGGCCCCAGCCCAACGGCTAGAAGGGCCTAACGGTCATATAAAACGATAACATTAAAAATATAAAAAAAAAATTAAAAAAACCGGCTAAACCGGTTCTTACCGGACCGGAACCGGTTCTTACCGAACCGGTGTTACCGGATAAAAAACCAGGAACCGGTTCGGTACCCGGTCCTGTACACTAAAAGACCGGTTCCTTACCGGTTCAACCGGTACCGGACGGACCGGTACGGGAACCGGATTGGAACCGGACCGGACCGGCCAAAAACCGGTCCATTTGCCAGCCTTAGCCGCGACTAATGACTTGCACTCTTCAATACAATCGTTATCAAAATTCATTATCACTCCCGCTAATGTTTTTACACCTAGACGTTCTTCTATTTGTGTCTTAGATGTCTCACCAACGTTGTAGGATATAGCAGATACCGATTGGAGCTCACCACTCTGCCTCATTGACCTACAAATGTTAAAGGTCAGTTCCTCATTGTTCAATCGAAATTTCATCTGCCCCTTTTCCATATCTACTAAGGCTCTTTCCGTAGTAAGGAATGACCTCCCAAGAATAATGGACACTTCAAAATCAACTTCACAATCAAAGAATAACAAAATCTGCCAGAAATATGAACGACTCCACTTTTACTAGCACATTGTGGAGTATCCCTATAGGCTTTTTTATTGTTCGATCGACCATCAGTAGCCGCATCGCAGTGGGCTTTGGATCACCCAAACCCAACTTCTTGTAAATCGAGAAGGGCATGAGATTTATGCTTGCCCCCAGATCACATACTGCTTTCGCAAAATGTAATAGCCCGATTGTACAAGGAATAGTGGACGCACCCGGATCTTCTTTCTTTTGTACCAGAGATCTTGTAGCAATAGCACTACAATGCTGCATTCTATCATCATGTTCAAAAGTGACCAATTTTTTCTTTGTAACCAAATCTTTCATAAACTTGGCATAACCGGGCATTTGTTCTAGAGCTTCTACCAAAAGGACATTGATAGAAGTTGCTTCAACATTGTTATAAAACGTCGATATTTACCATCCTCGGTCTTTTTCACTAATCTTTGAGGAAATGGGGGTGGTGGTCTAGGCATGGGAGGTACCTTTTTAGGCACTTCAGCACCTTTTCCAGTGCTATCTTCTACCTCTACCACTTTATCAATATCTTTTGTCACCTTTTTCTCATTAGACGGCATAGGTGGATCAATGGTTTGCTTACCACCACGAGTAGTGATTGCCATACAATATCCGTCATTTTTTGGATTATGGACAGTGTTGCTAGGAAGAGTGCCCGGTTGCCGTGTGTTCACAGTCGCAGATAATTGGGCCAATTGTAACTCAAGCTGCTTAATCGATATTGCATGTGTATCGACTTTCTGCCCAATACCCGCTAAATCATTCTTCAACTCTTTAGTGTGCTTATCACTAGCATCGAACCTCCTCCTCATTTTATGCAACATATCCTCAACTCGCGCCATACTACCTCCACTATCCCTAGAAGTAACTTCACGATTTTGAGGAGGAACATAGGGTCCATTCCTATCACTTCTATTACCGTAGTTATCCCTGTTGAAGTTGTTGTCGTGGTTGTAATTTTCTTCTCGAACATAATGACCCTCACAGTTATAGTTACCATAGATCCGACCTTGGTTCCCTTGACCTTGGCGCCAATTCTCCTGATTAGAGTCTTGGGCACTCGGTCGAAACCCCCCTATCTGCTCATTTACCGCATATGAATCCTCCTCATAATAGCATTCATCATTTGGTGGTGGTGGTTTAGACAACTAGTTGACTGCATTTATCTTTTCTGCACCCCCAATGACATGTTTTAATACCAACCCAAGCTCAGTTCTCATCTGAGCCATCTCTTCACGAATCTCATCTGTGGCTGGGTTGTGAGTGGATTGTACTGCGAAGGTATTTCTCCCAGTATCTGACTTCCTAGTACTCCAAGCTTTATTGTTTTGGGAGATTTTCTCTAACTTTTCAGAAATCTCACCTAGTGTTGTGAATGGCGAGTGCCTCATCGCCTTTGGCGAGAGGCGAGGCTAGGCGAGGCCTCCTCGCCATTCCCTACTGAGGCGAGGCGGTATGCAAAAGGCGGCCCATGGCGACCTAATGGCGCTAGAAAAGGTGGCGCCTTTTTTATTTTTTATTTTAAAAATATTTGACTTAACAATATTAGTCAAAATTAGGGTTTTTAAAAATATTTTCAAAACCTGCTGCTGCACAATATTCTCCCCGACTCTCTTCTCCTCGCGATCTCTTCTCTTAGTCTCCATCATCTTCGAGTTGCTGTTGCTGAAGACATGAGGTATACCTCTTTTTTTCTATTCTTCTTCAATTTTCGTTTCAGACTTCCAGATCTGTTTTCTTCAAGTTTTCTTCACTACTCTTTTTTCCCGCTATTTTCTTCACTCTCTGTTTTGTCCCAGATTACTGTAAAATGCCTTCTGTTTTCACTGTGTTGTGAGTCTGTGATTGCTGTCCATTATTTTTTTTGAAAAAAAATTAATTAATTCTTTCTATATTAATTATTATAGTATTTGTAATATATGTAATTGCTATTAAAAATTTGAATATTATATGTGCAGTTAAATATTTTTAATTTTTGGTATTAATTGGCGCCTCGATAAAAAAAGGCGAGCGCCTCGCCGCTCGCCTCGCCGCATGGCGAGGCAGGCCCTTGTCGCCTCTCGCCGTCCAAAACACTGATCTCAGCATAAGGACACTCCCCATAAGAACCACCTGCTATAGTATCCAACACCGCTTTATTATTATTATCCTGTCCCCGATAGAAGTATTCCTTCAGTGACTCATCATCTATACGGTGATTGAGATGCCCATCGGAGTCTGCTATATTGTCATTACCTTTGTAGTATTCTTGGGGCCGTGGAGCGGGATTTTGTCCCCTTTGTTGGTTTTCACTTGGAGCATCGGGTAACAACTGACCATGAACATCAACGGGGCTGGGATGTTCTGGTTTGGATTATCATCATTAATACCCAAGTTTTGATTCATGTTGCGTAGTGTACGCTCTAATTCGTGATCGTAGGGAAACAAGAGTTCTCTTCCTCTCCGTGTATTTGACATACAATGAAGATAGTTCTGCAAGAATAAAAAAAAAAGAAACAAAGTAAAATTAAGAAAATATCGACTAAACTATAGTAATCAGTTTAAGTTAATCTAAAAGCTACTTTCCCCGGCAGCGGCGCCAAAATTTGATACGCTCAAACTTACTTGTCAAATAAGAAGTAAAACGGTCGTATCAAGTAAAGAACCCAACTAATGAGGTTAGGATCGTTCCCACGAGGAAAATAGTTCAGACTTAACTTCAATCTATTATTACTACTATTTAGTCAATTATTTCCTTGGAAAACAAAGACAATAAAAGGGGGGTTTTTATATCTAAATGAATGAACATAACTAGCTAAATTAAAGGATACAACTAACACATTCAAATGTTGGATTTAATCAATTAATAAAAGTAACTAGGGTTTGCTTGTTCCCTACAGGTTCCTAACTTGATAATTCTAACTATAACAATTCTTTCCTAGCATCTTGCATGCAAAGTGATAAGTTATGTATTTCTAAATTCTTGGTCCGACATCTAGAAAATTTCACTCCGCACCTTGGTCCGGCTACGTGTGTTGCTATACTAACCCTTACCTCTTATTAAGCATTGTATTCGATATTTGACTAAGTTATTACCTCGTGCCAATCAATACTAGCCTATTAGATAGTATACACTAAATCTATGTTGATAATTCTTTTTCTATTATCTACCTCCTTGGTTCGGCAAGCAGCATTAAGGCGAGTTCTAACGTTGGTCATCCGTTAAAAATACTTCTAAGCGAAAGAATTATCAATACATGCAAGACACTATTCTAGAATTGTTATTTTAGTTCGAGTTTGTCTTATTACTAGTTCCAGACACGTGCGTTGCACGTGTTCCCCAAGCTAAATTGCATGAAGTTGTTGTAACGATGTGTTTGTATGACCTCTTTAATATTAAAGATGAAGAAACCACAAATAGTGTGAAAGAAAAATAATTATATGTTAAATTGTGCGTACATTTTGATTTAGTAATTTGCTGATAGAATAAAAATAGATCAACAAAAAAATAATTACGAATTAAAATAATTAATTAAGAAAAATATATACAAAACTTTCACATATATAAGAAAATATTAGGAAAAATAGAAGGCATACCACTATATAAGAAAACTCACATTTATAAGAAAACTTTCAAATTTTCTTTTCAAGAAAATCAAAAAAGTCTTTCTTTTGTAATGGAAGATATATGTACGTTTTTCTTGTAAAGACGGTTTAACTTAACTAAGAGAAAAGTAATTAATTAAATTGGACAATTTGAACTTAAACTTCATATTAGAATTAAAATGAATTAAATGAAAGAAAATGAAGGATAGGAATTAAAGTCTCAAACATCTTTACATATTTCACCAGTAGCTAGAGACTTTTAGTAGATGAATATGGTCAATATATTAAATTAAGTGTATTTAATTATTAAGTAACCCTTCAATTTCTTCAAATTTTATAATTTCAAAGAGTGTTATACTCTATACAAATTTATAGGATAATTCTAGTAATCTAACCTTAACTTTGTTGCTTCACACTTTTAATAGAACTAATAATTCTATTTTTACTGTAAAGTTTGTAAAATAAAATAGTAAATCAAGAAAAAGTACTTTAAAAGCTATACAACTTATGTGGTTATCAAATCAAGAACAATTATCAACCATGCAAAGACTTAAATCATAAAACTCAAAGTCTTATTGTGTACAATAATATTTTATATGTAGTTATTTATTTATCAAATAGGAAAGAAAATAGAAATTCTTTAATGGTAAATAAAAGAACACCTCTAAGAATCAACAAAAATATTATAAAATGAGGCTAAAATTAACAACGTGAAAGAAAAAAGTAGTAATAATGTGAAAGAAAAAGAGATGACAACTTTCTTTATTCTCTTCCAATTATTCAAAATCTCTTCGATAGGATACAATTGAGGGACTCAAAGAATTGTCATGAATATGTCATTAACCCATTTCATGGATGAAAGGTGAAAGTAACAAGTATATTATTATGAACATCAACAAATGTATAATATCTTCATTTCTAATATAATAACACAAAATAAAAATTCCACTTGAACACATAGAAGAAAAATCTTAGCAGATCTTAGTTAATCTACAATAAAATTATCAAACAAATATTAAGATAAAATAAATGAAGAGAAGTAGCTATCATCAAAACTAAGACAATATATATCATGACATAATTTACAGATCGAAAAATTAGTGAAGCACACAATGATATTTATAGCCAAGATATATAAAAACTCAAAAGTCAAGTTAGAATAAGATCATTAAAATATCATTAAATCTCTTTATTAAAGAAGTGAAAGGACACTTTATATTTTATTCGTTAAAAATGGTTAGATTTCCAAAACTATTAAAATCCAAATTCATAGTTATTCTTTAAAGTTAAAACGTATGACTATAGGTATTCAACATATGTACTAATACACATAAAAGAACATGAAGAACCAATTTTGAAACCGTTAAAACATTTATTGTATGGTAGTCAATATGATACTTATCATTTATTTAAACATATATTTACATTTTTTTTACACAAATTATTAAAGAAGTATTTTCTTTATTTAAAGATAAAAATGTTTAATTAATTATATTAGATGAATTTAATTAAATATTTTATAACCTTTTCATTTAATGTAGGGGTAAAATGGTAATTTAACTTTTAAGTTTTGAGCTTCATGCTTGTAATAATATATGATTTACCCATGGTTCCCACAACCCTAGTTATGGAGTTTAGTTATCCATAGTCATAATCACAATATTCATATATATGATATAAGAATTCATGCACTTACTTCAATGAGAAAGAATAAAATCAAGAAATTTACTTGATTAATCGACAAAATCACCAACAATCAACTCCAGAGAAAAGTGTAACAATCCATAGTGTAATAATTAGGCCTGGGCGTTCGGTCAATTCGGTTCGGTTCGTAAGTATCAGTTCGGTTTTTTGATTTTCGGTTTGGCCAAATATGAAACCAAACAAAATCGAAATAAATTCAGTTTGGTTCGGTTATTATAAATTCGGTTCGGTTTATTTCGGTTCGATTTCGGTTTAACCATATTTAATAAAAAAATGGTAAAACGGCCATCGTGATAACTAAATATCGACTCAATCGATAATAATAAAAAAACTATGAAAAGTCAAGACTCAAGACAACATCACAACAACACTAGAAAGAAATTTCAACAAACTTGTGTCCATCACTAAAATAGAGTTAGTTACAAACTAAAGTCATCATTATCTGTCTCATTAAAACTTCCAGCAACAAAGAGATTTAGAAAACAAACAAAACATCGTTGCAACTTGCAACCTCCATTGCAATAGCTCCCATGTTCTAGCATATAGCAACCAAGAAAATAACAAAACATTGATGGACCTGCGAGAAAACAAATCTGTTCAGACAAATGATCTACATTTCATAATAGAATATATAAAACTATCAAGCAAGTTATGTAAATAAGTTCTTTACTTACTCGTTACCGCACATCACTAGTTGATAGTTGAACTTACAAGCTGCAACTATATATCAATTATACTAGATTCAGTCCCACTACAAGCAAAATCTAAAAAAATATGAAAGAATTTGTTAGTTGTTAAGAAACACAACAAAATTATTTTCAATATAGTTAATACAAATATCAAATTCTTACCAAGTTCAAGATACTCTAAATCTTCCTCAATATTGATTGGAAAAGACTCACTTGTAAGCCAATCTTGAACACAAATAAGAGATTGCACAATTTTAGGAGTTAATGAACTCCTAAAGGGATCAAGAACACGACCTCCTGTGCTGAATGCACATTCCGATGCGACACTTGAAATGGGAATGGCTAACACATCACGAACCATCTCCGCGAGAATAGGAAATCTCGACTCATTAACTTTCCACCACATTAATATATCAAAGTCATCACTATCTGACTCAATATCTTCCGCAAGATATCTTTCCAATTCTGATTTATTACCTGAACTTCCACTAACTTCTTTATGCTTCTCAAATTGTTGTTTCGTTCTCAATCTTCCTCTATTTGCAAAGTTGCCACAACCACTCACACTAGATATACTTGATGAATTGTCAGACGAAGTGGGTGAAGATGGTACATGTAAAGAGCTTTTTGGGGATTTCTTGACAAAATACTCGAACAGTTTGTTCATGTATTTTTTCACTTCTGAACATAGCTTTTCCCCAACTTCTTTTCCAAACATGTCCACAATTGCAAATGGAACATAATCAAGCTTGTTATGGGGATCCAACACAGATGAAATAAAGATCATTTTGTTCATTTTTTGTGGTTCACCCCAATACTTTTTGAACTTCTCATTCATACTTTCCGCCATTTCTTTCAAATTACGATCTTCATTTGTCATCATCTCTTTCAAAATAAGATTAAGTTCAGCAATTTCAACAAAGTGTGTATTGCTAGTGACATAATTAGAACCAGAAACCTTCAAAGTTAGTACATAAAAAGTTTCAAGAAATTTCACCATTGACCTCACATTTTTCCAGTCAACACTTGAAAGAATATTTGCAATAGTTCCATCTTCAACACTAAATTCATCTTCAACACTAGTTCCATCTTCAACACTAGTTCCATCTTTGTTTTTAGAAGAATCAGAACCAAAGGTACGAAGATGATTCAAGTATCCAATATCATAAAAACTATATCTTTCAAATGCAAGCTCAAAATGTTGTGCTATATCAAGCATCGAATATGTAGAGTTCCACCTAGTAGGAACATCTAAACATAATGATTTCTTACAAGTTATCAATTCAGATTCACAACATTCTTTAAACTTTCTAAGTCTTGCGGGAGATTGTTTAATGTATTTCACGGCTTGTCTCACTAGCCTGACAGACTTAAGGATATGTGCCATACACCTCACATGAAGATGGTCACCATCCATAATGTTAGTTCCCCAATTGCTCAATTTTTTAGACATTTCTTTCACAGTAACATCATTAGAACTAGCATTATCAACTGTAATAGTAAACACATTATCCAAACCCCATTCAAGCAAACAATTAGTAATGCAAGCCGCCATATCCACGCCCTTATGACTAGAAATAGGACAAAAATTTATTATTCTTTTATGCAGAATCCAATTTCTATCTATAAAGTGGGCTGTCAAACACATGTAGTTTATTTTTTGTATAGAGGTCCAAGTATCTGTTGTAAGACAAACTTTTGGACGTGCTTCTTTGAAAACCTTCTTCAAAAGTTTTTTTTCTTCAAGGTATAATTCATAACAATCTCTCATCATAGTTCGACGAGAAGGAATATGAAATTGCAGCATTGTAACTCTCATGAAGTTTTTAAACCCCTCTCTCTCAACAAAACTAAATGGTAGTTCGTCAACAATTATCATTTTGGCTAAAGCTTTCCTACTTTGTGCTTGGTCAAATTTCCAAGTGCTAATGACCCCTTCTTTTGATCCCGTTGAAGATGGTAGAAAATTAATTAGATTTCGACCTTTATCTACGGTGTCACGAGGAAATTTAGGACATGTTCTCAAATGAGTATTCATTGATGACGTACCATTAGATGATGTAGAAGCTGTATAAGCTTTTGCACAATACTTGCATTTGGCTTTACTACCTTCATTTTCATCAGTGAACTTTTCAAAATGCTTCCAACAATTAGCTCTAGGTTCCATGATTTTTCTTTTCTTTGAAGTATCAACATCAACTTCAACCTCACTTGGAGATGAGGTATAAGGTATGTTCTCATTTGAAGCTCCACTTTCACTTCCCTTACTTCCAGTTTGTGCCATCTATACAAAAGTGAAACAAACAACAAGAACAACAATCAATATCACACAACACTTTTTCACTACACAAAACTCCAAAAAAAAAATATTACCGACACTATTATTTTAATCTATATGAGTATTGAAATTTTCTTTATCTATGGTAAATCATAAATAATCATTCTAATTTTATAATTGTAATTATTAATTAAAAAAAAGTCATAAGATAAAAATCATTTAGTATTAGCAAATAATGGAAAAACAAAAAAATCATACAATTAAGACTAACAAAAATAATGATTTGCAGAGCACAGAAAAGAAAAAAGTATTTTCACAAACTTGGTTATCTTCTTTCTTTCACTACTACTACTACTATTATTATTATTATTATATTTTGGATGTGTTTTATAAAGGCATAATAAACTTACGAGTGACGAAAACGAGAGATGAGAGTTGAGATGAATGAGAGGGGTGGTTGTGGGCCTGTGGAGAGCCGGCGGGCGGCGATTGACGACTGGCAGTGCTACTGGCTGCTGTGGCGGTGGCCTGGGTGGCGGCTGGCGGCGTGGGAGTGGCGACTTGCAGTGTGACGGACGGACGAGTTGACGACGGTGGACCGCGACGGTGGGTCGGACGTCGGTGGCAGTGGACTGGTGTTTCAAAGAAGAAGGTTTCACTTTCAAGTTTCAAAGAAGAAGTTTTGACTTTCAGACTTCATTGTTAATTTAGGGATTTATTATTTAGGGAAATTGGCTTGGGGATTGGGTATTGGGTAATTGGGTTATGGGTATTTGGGTTATGATTTAAGAATTTGAATAATTGGGCTTGGGCCGAGTAATAAAAATTTATGTAATTGCGCTTGGGAGGATTAGAATGTAGGAATGGGTTATGGGGTAACAACAAATAACAAATATGTATATATTTATATAATTTCGGTTTTTCGGTTAACCGAATTTTTAAATTTAAAACCGAAAACCGAACCGAAATATCAAAATTTTAAAATTCAAAACCTTAACCGACCGAAATAACCGAAAAACCGAAAAGTGTCTAATCACCAAAAGTCTAACCCCAAAAATAAGGTTTTTCGAATTATTTATAAAAAACAAAAACCTAATAAAAAAAGGACTATAATTGCTAGAAATCTGTCAAAACGCGGCTGGGTCGACGGACCTCGTGACGAGTCATCGTGGATTCCGTCGTCCCATACTTTGCAAATTCTTCTGCTACTCTCTTCATTACCCTTGACGGTAGGTATGACAGATCGTCACAGGCACAATGGTCTGTCGAGGATCTTCGTTCCATAACACTTAAACTCTTTGGAATTTGGGTACTGGACTACTTCTCTGATCATCACGATGAACCAGCCAGGACAGACCGTCATGGCTACGACGGTCCGTCACGCATTTCGTAACCCCACACTTGGTCAGACTTTCTCATCTTCCTTCAGCAGCTTCACTACGATGCCACCTACGGACAGTCACAAGCTCCGTAGGTGGTACTTTTCTGCATTTCTTGCTCAAAAACTTCCGCGTTCATCTTTAGACAAATTTCCTGCAAATAAAGAGAAACTTACATAAAAATTAATATAAAAAGACTTTTGGACATACACTAAACTTAAAGAAAAACATTAAAAATATCGTGAAACCACGGTATATCAACACCCTTAACTTAAATTCGTTGTTTGTCCTCAAGCGACGCACTATGACTCACTACAAAATCTTTGTACAATAGTATCCATGTTTTATCTTTCGCTATCAATCCCGATTAGTCTCATCATATTTCTGCATGTTATCACTATTAGGCTTGAATTATGTGGAATTAGACCATGACACAGACTCACCACACACTAACACCTATCCTCTTTAATTTCTCACCGAGGTGTTAATATTTCCGGTAGCAACTAGTGTCCTCACTTCAAAACAACATCCTCATTTTTCACACAATGATTTCAATTTGAGTATAAGGATTACTTTTCAACACTCACTCTCAGAACAAATTGACAACTCATTCATACATATTGCCATAAGCTTGCCCTTATTTTCACTGCTTTAAGTTCACTATACAACTCTTAGGATCACGATAGGACTTTCTTAGCTTGTAACATAGGCTCAGGGTCAGGTATATTTAGGTATACTTTAGTGATTTTTTGCCCTCCTTGACATATCGGCCAAACATACCACTTTTTATCATTTTATTTCATCCAGTTTCTCATATTTTTTCACCTTGCTATTTTCCCTTCTTTCGTTATTTGTGTAAGTGATTCTCTTCTTTTCTTACTTGTATTTATTATATTTTTTTTATTTATTTCACTTTTCTTTCAACTGATTCTTGAGTCACTTTACTTTTGTTCTTTCTCTCTCTTTGTTCTTTCAACCTCACTTTCCAGAGCATTCCTCATAATGGTCACCCTCAACTCATGGCTTTGCCATGAGTCAAAGTACACAATACCCAAAGTTGGGTCAGAGCCATAAAAAATTGCTTACTGCATTAGCCACCCTCAACTTATGCTTTTGGCATAAGCTGAGGTGCACATGTCCAAGGCCAACACATAATTCCCAATAAAGATCAGTTGGGGTGAAAAACGAAGGTCTAGTTTAAGCTCAAATCATTTGGATCAAAGAAGGATTAATTTTATTTTTTTTTAGGCTAAAAATGTGTTATATATTGAACAAGGGCTTATGATCATTTTCTAATTGTCTATTACAACTTACTTTTAGCAGGACTAACCAGGCAAGTTCTAGCTCAGTACAAATAGTGGACTATTCAAATCTTCCTCACACTCACTTGACATCTCGTTACTCTACCAGATTATCAGACACCTAGTTCGAATTTTAGACTTAGGGTCATGAAGTGGTGTAGTGTATCTCTATGTCATGCTTAGAGTCACACATTTATCAATTACTATGCCTAGTCATGCATCATTTTCATTTCATCGGGATATCATTTTAGCCATCAAGCTTCAGAGTTAAACTATGTATACAAGATATAGACATGCCGGTTCCACAGTAAAAATAATCAGTCTCTTGGGGAAAAAGAACACAGGCAAGTAAAAACCCAAAAGAGGATAGTGAATTGGGCTACTCAGACTTCACCCTAGCACTCACTTTCCATTTACCCCACCCCCAACAAAAAGACATGCAATTGTCCCCAATGCATAAAAAAATTGAAATACCAGAGTGGTAGGTGAAGCAAACTTGGGGCGCAAAGCGCCGACGATCAGCAAGCTGGTGGGTCCGGTTCACCGGAACCCACTACCTCTGTAATCTGGACACCCTCAGTAGTGTCCTCATCAGCAACAACACTATCAACAGTGCCTCCCGCCATCACCACATCTCTGAAACTAGATGCCCCAGCAACTGACTCTACAACCCTCATCCGACGCGCCTCCTCATCAGCAAGCGAGGCTCTTCTCGCAGCCTCCATCTCACGACGCTCTTTCTTCCGTGCTCTAGCCTCATCCTCCTCTCGACCCCTACGCCTCTTGGCATGCTCTCGAGGGGGAGGTGGTGGAATCTCAAAAGTGGCGAATAAGGCCGCAATCACTGTGTCCTTAGCAGGCTCTGCAGAAGAGGCCTCAGACTCAAGCACCCTAGCCTCTAGGATCATATCAATGTCTGCTCGAAGACTCTCGACCGCAGCCTGAAGGGTCGACACATCCACCTGAGGGGCTGGCTGGGCTAGCACCTGCAACTCGAAAGCGTCCAAGCGCTGATGAACCTCAATGATCTTTCGCTCTGTGTGCTGGACCATTCTCCTCTCCAAGCGCTCTTCTGCCTTAGCAATAAACCTCTGCATCCAAGGCTGGATGTGATGCAAAAGAGTAGCCATCTGTGCCTCTAGTTTCTAGACCCTAGCAAGCGGGACCAGAGCGGGGAAAGGGGCTGAGCGAGAGGAGCTCGGGGCAGTGCTACTACCCGGGATAGACTCGACCGGGGTAGTGTCAGTGGTTCCAGAAGCAGCCTGCGTAGCCGTGCGAGCCCGTGCCATCGTATCAGCCAGATTGTGACCAAGTTAAGGCAACTCTAAACGAGGCCCTCTGCGAGGAGCGAACTCATTGGCCTCATCCCTGATGAGGCCGATATCGACAGTGCCTAGCAGAGTTTTGAGCTGATCAATGTGTCAGATGGGCACACCTGCATAAAGAAAATATCATGCACGGAAAAAGGTAAGTAGTTGTGACCTTAAAAGTCCTCTCGTGCATGACCGCCTGTAGAAGCCAAGCAAAGTCCACCTCAAACCTGACTATCATCGCTGCCATCAGAACTGCACGATTTCATGTGACTATATTATCAGCGGTTGTGGGGGAAAAGCAGTGGCGGACAATCAACCATAAGAACTTAGCCGTGAGGGTCATGTTAGCCTTCTTGATGGCTCCCTTCGGCTCCATTACCCAGTCGGCACCCTCTCTATCAACAGACAAGTGCAGGGCCATCCACTTCTGGCTCACGCAAGAATTGGCCATCTTTGATAATTTGCCACCGGTAGTCAAACTCGGCGGTGAGAGGGGTCGGATTGGCATCAACATCCTCGCCGTATAGATACCGGCGGATGGCAGGCAGGAAGATATCGACCTGAATGCCACGTACTCGGACATGCTAAAGTGGGGCCTGTTTGGCGGGGGCAGCCCGCCTATCAATCTGTGATCTGAGAGTAGCCACGTAGGAGGCGTAGAACTCTCGGACCACTTCACTATAACGGCCCAAAGAACGCGCTCTCCACTCCAGTCGGTGTCTGGTGAAGAGATTGTGGATCTCTTGCATAGTAGGGAGACTTCCCGTAAGGACCCGCCTCTCCAATGTAAGGGTCCGTCATGACTCCTTTCTCATTCAGAAATTTTGCGTCTGAACCCCACACTTGGTTACGACTGTCCGTCACGCACTTCGTAACCCCACACTTGGTCAGACTTCCCCATCTTCCTTCAGCAGCTTCACTACGATGCCACCTACGGACTGTCACAAGCTCCGTAGGTGGTACTTTTCTGCATTTCTAGCTCAAAAACTTCCGCGTTCATCTTTAGACAGATTTCCTGCAAATAAAGAGAAACTTACATAAATATTAATACAAAAAAGCTTTTGGACATACACTAAACTTAAGGGAAAAACATTAAAAATACCGTGAAACCATGATATATCAGCCCCCTAGCATGTGAATATTGAGCAGTCATGGCCGTGGTACCAATATGATGTTAATATGGATACTAGGGTTATGCTTATGTGGGATGTATTATACTGTTTTTGAATAGGAAGATTTTGATAAGTAGGGGCAAAGCTACCATTTGGATATTAGATTGTACTTTTGCTTTTGTCATAAAAAAAAGACTTTAGTTTTGCTTATGTTAGTTTTCTCATCAGAAGAATACATCAATTAGTGATTGTAACAATAATAACTAAAGGGTGTATATGTCAAACAAAACCGAATAAATAAATATACTAACCACCTTATTGTGTTATCAGAAGAATATATGTTTGATAAACAGGATATTTCTCACAAGAAACAAAATCATGATGAAGAACATAAGAAACAACATATACTGTGTTTCAGGCATATTTTACCTTGAACAAATAGGAAACTGATAAACGGTCTATAATGTGATATCCGTGCTTTGTAGAGTATCATTTCCCCAAATATACAAAATGACAACCATTTTCACCTATCTTCACATGATCTTTTAATTTTACTTCATTTTGTGCAGTCTGTTGTCAGTTCCAATATTTAATGAAGTTACTTTGCATTTCTGTTCAGTATAGCTATTTGTTTTGATTTTGTCTTGATATTTACCGTCTCAAGTACTCAAGCTGAAAAAGTCACCTCAAATTTTGTACAAACTGATAATTTTAATTGCAGGTGGACACTAATCTGAAATCACCAGATGATTTTGTTACTGAGGGAGTGTCTGGTATCCGTGAAACTTATGATATTGCGCCGTACTCTGCTATCCTTCTTGAAGCAAAGTAATAATTACCGGAGTTATGCTGCTTTGGATGTTGTTCATG-TCTATTACACTATTACGTCCTTCTGGATTGGATAGTTAAAATCGAAATTCAG</genome_strand>
        <mrna_strand>GAAATAATAACAGTTATGGACATGATACCGCCATCAACAATTTCCAGTGGGGACAG..........................................................................TTGGAAGCAAGGAAGAATGATCACTTCAGGTTCTTTTCCAAGATGATAAAGTTTCGACTGTCCCACAATGTTCTTAGAAAGGAAAACTTCATTGAGAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGACATTACCTGGCTCGAGGACAACTGGTACAATGAAGAGAGTAGATTCCTTGCATTTAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCCATGATGGGAATGGAGGAGATATTTACTTGGCATTTAATGCACACCACTTCTCCATCAAAACAGCAATACCTTCACCACCACGAAATAGAAGTTGGTACCGAGTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGACACTAATCTGAAATCACCAGATGATTTTGTTACTGAGGGAGTGTCTGGTATCTGTGAAACTTATGATGTTGCGCCGTACTCTGCTATCCTTCTTGAAGCAAAGCAATAATTACCGGGACTATGCTGCTTTAGATGTTGTCCATGAGTTATTACAGTATTACCTCCTTCTGGATTGGATAGTTCAAATCGGAATTCAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E543257" ref_strand="+" ref_description="SGN-E543257 [TUS-64-P17]">
      <seq>aaaactgaaactgaaactctgaaagtgaaaccttcttgacttcttttttgaaacaccaaacacgtccacagtccagccgccgcagcagcactcgccagtcgccggctcaccacgggccaccactctcattcatctctcaactctcatctctcgttttcgtcactcatggcacaaactggaagtaaaggaagtgaaagtggagcttcaaatgagagcataccttgtacctcatctccaagtgagggtcaagttgatgttgatacttcaaagaaaagaaaaaccatggaacctagagctaattgttggaagcattttgaaaagttcaccgatgaaaatggagctagtaaatccaaatgcaagtattgtgcaaaaacttatgcagcttctacatcatctaatggtacgtcatcaatgaatactcatttgagaacatgtcctaaatttcctcgtgacactgtagataaaggtcaaaatttaattaattttctaccatcttcaacgggatcaaaggaaggggtcattagcacttggaaatttgaccaagcacaaagtaggaaagctttagccaaaatgataattgttgacgagctaccatttagttttattgagaaagagggttttaaaaacttcatgagagttacaatgccacaatttcatattccttctcgtaaaactatgacgagagattgttatgaactataccttgaagaaaaaaaacttttgaagaagttttcaaagaagcatggccaagagtttgtcttacaacggatacttggacctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="+" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="23114" stop="24995"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="23580" g_stop="23674" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="78" r_stop="165" r_length="88" r_score="0.779"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="23675" i_stop="24078" i_length="404">
            <donor d_prob="1.000" d_score="0.84"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="24079" g_stop="24695" g_length="617"/>
          <reference_exon_boundary r_type="cDNA" r_start="166" r_stop="781" r_length="616" r_score="0.950"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="+" ref_id="SGN-E543257" ref_strand="+">
        <total_alignment_score>0.927</total_alignment_score>
        <cumulative_length_of_scored_exons>712</cumulative_length_of_scored_exons>
        <coverage percentage="0.912" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E543257" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="23580" e_stop="23674"/>
          <exon e_start="24079" e_stop="24695"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CACTGCCAGTCGTCAATCGCCGCCCGCCGGCTCTCCACAGGCCCACAACCACCCCTCTCATTCATCTCAACTCTCATCTCTCGTTTTCGTCACTCGTAAGTTTATTATGCCTTTATAAAACACATCCAAAATATAATAATAATAATAATAGTAGTAGTAGTAGTGAAAGAAAGAAGATAACCAAGTTTGTGAAAATACTTTTTTCTTTTCTGTGCTCTGCAAATCATTATTTTTGTTAGTCTTAATTGTATGATTTTTTTGTTTTTCCATTATTTGCTAATACTAAATGATTTTTATCTTATGACTTTTTTTTAATTAATAATTACAATTATAAAATTAGAATGATTATTTATGATTTACCATAGATAAAGAAAATTTCAATACTCATATAGATTAAAATAATAGTGTCGGTAATATTTTTTTTTTGGAGTTTTGTGTAGTGAAAAAGTGTTGTGTGATATTGATTGTTGTTCTTGTTGTTTGTTTCACTTTTGTATAGATGGCACAAACTGGAAGTAAGGGAAGTGAAAGTGGAGCTTCAAATGAGAACATACCTTATACCTCATCTCCAAGTGAGGTTGAAGTTGATGTTGATACTTCAAAGAAAAGAAAAATCATGGAACCTAGAGCTAATTGTTGGAAGCATTTTGAAAAGTTCACTGATGAAAATGAAGGTAGTAAAGCCAAATGCAAGTATTGTGCAAAAGCTTATACAGCTTCTACATCATCTAATGGTACGTCATCAATGAATACTCATTTGAGAACATGTCCTAAATTTCCTCGTGACACCGTAGATAAAGGTCGAAATCTAATTAATTTTCTACCATCTTCAACGGGATCAAAAGAAGGGGTCATTAGCACTTGGAAATTTGACCAAGCACAAAGTAGGAAAGCTTTAGCCAAAATGATAATTGTTGACGAACTACCATTTAGTTTTGTTGAGAGAGAGGGGTTTAAAAACTTCATGAGAGTTACAATGCTGCAATTTCATATTCCTTCTCGTCGAACTATGATGAGAGATTGTTATGAATTATACCTTGAAGAAAAAAAACTTTTGAAGAAGGTTTTCAAAGAAGCACGTCCAAAAGTTTGTCTTACAACAGATACTTGGACCTC</genome_strand>
        <mrna_strand>CGCCG-CAG-CAGCACTCGCCAGTCGCCGGCTCACCAC-GGGCCACCA-CTCTCAT-TCA-TC-TCTCAACTCTCATCTCTCGTTTTCGTCACTC....................................................................................................................................................................................................................................................................................................................................................................................................................ATGGCACAAACTGGAAGTAAAGGAAGTGAAAGTGGAGCTTCAAATGAGAGCATACCTTGTACCTCATCTCCAAGTGAGGGTCAAGTTGATGTTGATACTTCAAAGAAAAGAAAAACCATGGAACCTAGAGCTAATTGTTGGAAGCATTTTGAAAAGTTCACCGATGAAAATGGAGCTAGTAAATCCAAATGCAAGTATTGTGCAAAAACTTATGCAGCTTCTACATCATCTAATGGTACGTCATCAATGAATACTCATTTGAGAACATGTCCTAAATTTCCTCGTGACACTGTAGATAAAGGTCAAAATTTAATTAATTTTCTACCATCTTCAACGGGATCAAAGGAAGGGGTCATTAGCACTTGGAAATTTGACCAAGCACAAAGTAGGAAAGCTTTAGCCAAAATGATAATTGTTGACGAGCTACCATTTAGTTTTATTGAGAAAGAGGGTTTTAAAAACTTCATGAGAGTTACAATGCCACAATTTCATATTCCTTCTCGTAAAACTATGACGAGAGATTGTTATGAACTATACCTTGAAGAAAAAAAACTTTTGAAGAA-GTTTTCAAAGAAGCATGGCCAAGAGTTTGTCTTACAACGGATACTTGGACCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E543256" ref_strand="+" ref_description="SGN-E543256 [TUS-64-P17](-)">
      <seq>aagaaatccccaaaaagctctttacatgtaccatcttcacccacttcatctggcaattcatcaagtatatctagtgtgagtggttgtggcaactttgtaaatagaggaagattgagaacgaaacaacaatttgagaagcataaagaagttagttgaagttcaagtaataaatcagaattggaaagatatcttgcggaagatattgagctagatagtgatgactttgatatattaatgtggtggaaagttaatgagccgagatttcctattctcgcggagatggttcgtgatgtgttagccattcctatttcaagtgtcgcatcggaatgtgcattcagcacaggaggtcgtgttcttgatccctttaggagttcattaactcctaaaattgtgcaatctcttatttgtgttcaagattggcttagaagtgagtcttttccaatcaatattgaggaagatttagagtatcttgaacaacttgaacttgattttgcttttagtgggactgaatctagtataattgatatatagttgcagcttgtaagttcaactatcaactagtgatgtgcggtaatgagtccatcaatgttttgttattttcttggttgctatctgctagaacttggaagctattgcaatggaggttgcaagttgcaatgatgttttgttggtttttaaaatctatttgttgctggaagttgcaatgagctagataatgatgactttagtttgtaactaactctattttagtgatggacacaagtttgttgaacttaaaaaaaaaaaaaaaaaactcgaggggggccc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="+" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="25423" stop="26972"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="25723" g_stop="26211" g_length="489"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="487" r_length="487" r_score="0.965"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="26212" i_stop="26287" i_length="76">
            <donor d_prob="0.000" d_score="0.86"/>
            <acceptor a_prob="0.827" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="26288" g_stop="26377" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="488" r_stop="577" r_length="90" r_score="0.978"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="26378" i_stop="26474" i_length="97">
            <donor d_prob="0.991" d_score="0.98"/>
            <acceptor a_prob="0.828" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="26475" g_stop="26669" g_length="195"/>
          <reference_exon_boundary r_type="cDNA" r_start="578" r_stop="772" r_length="195" r_score="0.938"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="776" polyA_stop="794"/>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="+" ref_id="SGN-E543256" ref_strand="+">
        <total_alignment_score>0.960</total_alignment_score>
        <cumulative_length_of_scored_exons>774</cumulative_length_of_scored_exons>
        <coverage percentage="0.959" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E543256" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="25723" e_stop="26211"/>
          <exon e_start="26288" e_stop="26377"/>
          <exon e_start="26475" e_stop="26669"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGAAATCCCCAAAAAGCTCTTTACATGTACCATCTTCACCCACTTCGTCTGACAATTCATCAAGTATATCTAGTGTGAGTGGTTGTGGCAACTTTGCAAATAGAGGAAGATTGAGAACGAAACAACAATTTGAGAAGCATAAAGAAGTTAGTGGAAGTTCAGGTAATAAATCAGAATTGGAAAGATATCTTGCGGAAGATATTGAGTCAGATAGTGATGACTTTGATATATTAATGTGGTGGAAAGTTAATGAGTCGAGATTTCCTATTCTCGCGGAGATGGTTCGTGATGTGTTAGCCATTCCCATTTCAAGTGTCGCATCGGAATGTGCATTCAGCACAGGAGGTCGTGTTCTTGATCCCTTTAGGAGTTCATTAACTCCTAAAATTGTGCAATCTCTTATTTGTGTTCAAGATTGGCTTACAAGTGAGTCTTTTCCAATCAATATTGAGGAAGATTTAGAGTATCTTGAACTTGGTAAGAATTTGATATTTGTATTAACTATATTGAAAATAATTTTGTTGTGTTTCTTAACAACTAACAAATTCTTTCATATTTTTTTAGATTTTGCTTGTAGTGGGACTGAATCTAGTATAATTGATATATAGTTGCAGCTTGTAAGTTCAACTATCAACTAGTGATGTGCGGTAACGAGTAAGTAAAGAACTTATTTACATAACTTGCTTGATAGTTTTATATATTCTATTATGAAATGTAGATCATTTGTCTGAACAGATTTGTTTTCTCGCAGGTCCATCAATGTTTTGTTATTTTCTTGGTTGCTATATGCTAGAACATGGGAGCTATTGCAATGGAGGTTGCAAGTTGCAACGATGTTTTGTTTGTTTTCTAAATCTCTTTGTTGCTGGAAGTTTTAATGAGACAGATAATGATGACTTTAGTTTGTAACTAACTCTATTTTAGTGATGGACACAAGTTTGTTGAA</genome_strand>
        <mrna_strand>AAGAAATCCCCAAAAAGCTCTTTACATGTACCATCTTCACCCACTTCATCTGGCAATTCATCAAGTATATCTAGTGTGAGTGGTTGTGGCAACTTTGTAAATAGAGGAAGATTGAGAACGAAACAACAATTTGAGAAGCATAAAGAAGTTAGTTGAAGTTCAAGTAATAAATCAGAATTGGAAAGATATCTTGCGGAAGATATTGAGCTAGATAGTGATGACTTTGATATATTAATGTGGTGGAAAGTTAATGAGCCGAGATTTCCTATTCTCGCGGAGATGGTTCGTGATGTGTTAGCCATTCCTATTTCAAGTGTCGCATCGGAATGTGCATTCAGCACAGGAGGTCGTGTTCTTGATCCCTTTAGGAGTTCATTAACTCCTAAAATTGTGCAATCTCTTATTTGTGTTCAAGATTGGCTTAGAAGTGAGTCTTTTCCAATCAATATTGAGGAAGATTTAGAGTATCTTGAAC-AACT-TGAACTTG............................................................................ATTTTGCTTTTAGTGGGACTGAATCTAGTATAATTGATATATAGTTGCAGCTTGTAAGTTCAACTATCAACTAGTGATGTGCGGTAATGA.................................................................................................GTCCATCAATGTTTTGTTATTTTCTTGGTTGCTATCTGCTAGAACTTGGAAGCTATTGCAATGGAGGTTGCAAGTTGCAATGATGTTTTGTTGGTTTTTAAAATCTATTTGTTGCTGGAAGTTGCAATGAGCTAGATAATGATGACTTTAGTTTGTAACTAACTCTATTTTAGTGATGGACACAAGTTTGTTGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E299669" ref_strand="+" ref_description="SGN-E299669 [cLEW-1-K19](-)">
      <seq>tgactttgatatattaatgtggtggaaagttaatgagccgagatttcctattctcgcggagatggttcgtaatgtgttagccattcctatttcaagtgtcgcatcggaatgtgcattcagcacaggaggtcgtgttcttgatccctttaggagttcattaactcctaaaattgtgcaatctcttatttgtgttcaagattggcttagaagtgagtcttttccaatcaatattgaggaagatttagagtatcttgaacaacttgaacttgattttgcttttagtgggactgaatctagtataattgatatatagttgcagcttgtaagttcaactatcaactagtgatgtgcggtaatgagtccatcaatgttttgttattttcttggttgctatctgctagaacttggaagctattgcaatggaggttgcaagttgcaatgatgttttgttggtttttaaaatctatttgttgctggaagttgcaatgagctagataatgatgactttagtttgtaactaactctattttagtgatggacacaagtttgttgaacaaacttcaacaaaagttgtgatgttgtcttgagtcttgaaaaaaaaaaggaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="+" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="25641" stop="27010"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="25941" g_stop="26211" g_length="271"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="269" r_length="269" r_score="0.959"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="26212" i_stop="26287" i_length="76">
            <donor d_prob="0.000" d_score="0.86"/>
            <acceptor a_prob="0.827" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="26288" g_stop="26377" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="270" r_stop="359" r_length="90" r_score="0.978"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="26378" i_stop="26474" i_length="97">
            <donor d_prob="0.991" d_score="0.98"/>
            <acceptor a_prob="0.828" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="26475" g_stop="26710" g_length="236"/>
          <reference_exon_boundary r_type="cDNA" r_start="360" r_stop="594" r_length="235" r_score="0.903"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="+" ref_id="SGN-E299669" ref_strand="+">
        <total_alignment_score>0.940</total_alignment_score>
        <cumulative_length_of_scored_exons>597</cumulative_length_of_scored_exons>
        <coverage percentage="0.980" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E299669" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="25941" e_stop="26211"/>
          <exon e_start="26288" e_stop="26377"/>
          <exon e_start="26475" e_stop="26710"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGACTTTGATATATTAATGTGGTGGAAAGTTAATGAGTCGAGATTTCCTATTCTCGCGGAGATGGTTCGTGATGTGTTAGCCATTCCCATTTCAAGTGTCGCATCGGAATGTGCATTCAGCACAGGAGGTCGTGTTCTTGATCCCTTTAGGAGTTCATTAACTCCTAAAATTGTGCAATCTCTTATTTGTGTTCAAGATTGGCTTACAAGTGAGTCTTTTCCAATCAATATTGAGGAAGATTTAGAGTATCTTGAACTTGGTAAGAATTTGATATTTGTATTAACTATATTGAAAATAATTTTGTTGTGTTTCTTAACAACTAACAAATTCTTTCATATTTTTTTAGATTTTGCTTGTAGTGGGACTGAATCTAGTATAATTGATATATAGTTGCAGCTTGTAAGTTCAACTATCAACTAGTGATGTGCGGTAACGAGTAAGTAAAGAACTTATTTACATAACTTGCTTGATAGTTTTATATATTCTATTATGAAATGTAGATCATTTGTCTGAACAGATTTGTTTTCTCGCAGGTCCATCAATGTTTTGTTATTTTCTTGGTTGCTATATGCTAGAACATGGGAGCTATTGCAATGGAGGTTGCAAGTTGCAACGATGTTTTGTTTGTTTTCTAAATCTCTTTGTTGCTGGAAGTTTTAATGAGACAGATAATGATGACTTTAGTTTGTAACTAACTCTATTTTAGTGATGGACACAAGTTTGTTGAAATTTCTTTCTAGTGTTGTTGTGATGTTGTCTTGAGTCTTGA</genome_strand>
        <mrna_strand>TGACTTTGATATATTAATGTGGTGGAAAGTTAATGAGCCGAGATTTCCTATTCTCGCGGAGATGGTTCGTAATGTGTTAGCCATTCCTATTTCAAGTGTCGCATCGGAATGTGCATTCAGCACAGGAGGTCGTGTTCTTGATCCCTTTAGGAGTTCATTAACTCCTAAAATTGTGCAATCTCTTATTTGTGTTCAAGATTGGCTTAGAAGTGAGTCTTTTCCAATCAATATTGAGGAAGATTTAGAGTATCTTGAAC-AACT-TGAACTTG............................................................................ATTTTGCTTTTAGTGGGACTGAATCTAGTATAATTGATATATAGTTGCAGCTTGTAAGTTCAACTATCAACTAGTGATGTGCGGTAATGA.................................................................................................GTCCATCAATGTTTTGTTATTTTCTTGGTTGCTATCTGCTAGAACTTGGAAGCTATTGCAATGGAGGTTGCAAGTTGCAATGATGTTTTGTTGGTTTTTAAAATCTATTTGTTGCTGGAAGTTGCAATGAGCTAGATAATGATGACTTTAGTTTGTAACTAACTCTATTTTAGTGATGGACACAAGTTTGTTGAACAAAC-TTCAACAAAAGTTGTGATGTTGTCTTGAGTCTTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E423884" ref_strand="+" ref_description="SGN-E423884 [STM-42-P19]">
      <seq>atgggaagtaccgcgatgacatcaggagatttataaagggcgatgctggcatgaaaggaaattttgcaacccgtatcgcaggttcagcggatctgtacagagtgaacaagcgaaagccgtaccacagtgtcaacttcgtgattgcccatgatggctttaccttgtatgaccttgtttcatacaataataagcacaatgatgcgaacggtgaaggtggcaatgatggatgcaatgacaacttcagttggaattgtggaattgaaggtgaaacttcagatgcaaatattaacgcactgcgttcacggcaaatgaaaaattttcatttggcactgatggtttctcagggaacaccaatgatgcttatgggggatgagtatgggcatacccgctatggaaataataacagttatggacatgataccgccatcaacaatttccagtggggacaattggaagcaaggaagaatgatcacttcaggttcttttccaagatgataaagtttcgactgtcccacaatgttcttagaaaagaaagcttcattgagaagaacgacattacctggctcgaggacaactggcacaatgaagagagtagattccttgcatttatgctccatgatgggaatggaggagatatttacttggcatttaatgcacaccacttctccatcaaaacagcaataccttcaccaccacgaaatagaagttggtaccgagtgggtggacactatctgaatcaccagatgattttgttact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="41705" stop="17920"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="41386" g_stop="41324" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="39" r_stop="101" r_length="63" r_score="0.984"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="41323" i_stop="40220" i_length="1104">
            <donor d_prob="0.545" d_score="0.98"/>
            <acceptor a_prob="0.996" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="40219" g_stop="40130" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="102" r_stop="191" r_length="90" r_score="0.967"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="40129" i_stop="40047" i_length="83">
            <donor d_prob="0.969" d_score="0.98"/>
            <acceptor a_prob="0.991" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="40046" g_stop="39974" g_length="73"/>
          <reference_exon_boundary r_type="cDNA" r_start="192" r_stop="264" r_length="73" r_score="0.959"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="39973" i_stop="38023" i_length="1951">
            <donor d_prob="0.982" d_score="0.96"/>
            <acceptor a_prob="0.983" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="38022" g_stop="37943" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="265" r_stop="344" r_length="80" r_score="0.975"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="37942" i_stop="37450" i_length="493">
            <donor d_prob="0.443" d_score="1.00"/>
            <acceptor a_prob="0.966" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="37449" g_stop="37345" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="345" r_stop="449" r_length="105" r_score="0.981"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="37344" i_stop="37271" i_length="74">
            <donor d_prob="0.884" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="37270" g_stop="37172" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="450" r_stop="548" r_length="99" r_score="0.939"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="37171" i_stop="36340" i_length="832">
            <donor d_prob="0.968" d_score="0.90"/>
            <acceptor a_prob="0.713" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="36339" g_stop="36278" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="549" r_stop="610" r_length="62" r_score="0.984"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="36277" i_stop="35281" i_length="997">
            <donor d_prob="0.980" d_score="0.98"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="35280" g_stop="35172" g_length="109"/>
          <reference_exon_boundary r_type="cDNA" r_start="611" r_stop="719" r_length="109" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="35171" i_stop="34957" i_length="215">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.811" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="34956" g_stop="34919" g_length="38"/>
          <reference_exon_boundary r_type="cDNA" r_start="720" r_stop="757" r_length="38" r_score="0.474"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E423884" ref_strand="+">
        <total_alignment_score>0.974</total_alignment_score>
        <cumulative_length_of_scored_exons>719</cumulative_length_of_scored_exons>
        <coverage percentage="0.950" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E423884" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="41386" e_stop="41324"/>
          <exon e_start="40219" e_stop="40130"/>
          <exon e_start="40046" e_stop="39974"/>
          <exon e_start="38022" e_stop="37943"/>
          <exon e_start="37449" e_stop="37345"/>
          <exon e_start="37270" e_stop="37172"/>
          <exon e_start="36339" e_stop="36278"/>
          <exon e_start="35280" e_stop="35172"/>
          <exon e_start="34956" e_stop="34919"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGCGATGCTGGCATGAAAGGAAATTTTGCAACCCGTATCGCAGGTTCAGCAGATCTGTACAGAGTAAGAGCTACAGCTTCCAGAATTATGCATTGACAACTAGAGAATATTCACAACACTGTTCCATTTGCTCTGCTTCTTAAGTACCTTTTCTTTCTTTACTGATAATATTTGAGAAACATTCAGTTCTATGTGGTAGCAAGTTGCTTCACCAGTCCTATTTGATTAGATAGGTTTAGCAAAGCATCTGATTTGTGTCAATGCATATGGCTAGATTCTATACGATCCTTTTTGTTTATTGAGTTAGTAGTAGTATTTATGTGTCAATTCCTTTATATTTTCATCGTACTTTATTAACATGATCATGCCATTTTACATGTAACTGTGAGTGCTATCACATAATATATCATTACACAGTTTGTTTTCATTTATTACCATCTCATTTAAGCTGATTTCATTTGGAATACCGAGTTTCTATTTATCCTTTCCTTTCATTGTAAAAGAAATCTTGTGGATTCTAACCATTTTTATTTAAGAACATAGTCTATCTTTTACTTGAAGTAAGTAGATAAAACTTCCTATTTATGAAATAAAAGATCAATTGTATTCAGAGGTTCTAGTTTTGTATTTGTGTTATTTACTTAAATATATAATCTTGAATCAAGTTTTAAGTTCTTTTCATTAAACTTTGTAGTCAAGGCACTGTACTATATCACTTTTCTGCACAAAAGTATCACGAGAACAAATAAAAAAGAGTTAATGAGTTCGTAAGTAAATAGGAGTCTTTCTCAGTCAAACTCTTTTTTTTTCCCTCCTCTTACCTCTCTGTGTACCTCATGGACTTCTCCTTTTCTTTTACTCACAAATCACTATTTTCTTCACTTGACATCCCACTCACTTCACACAACACTACCTCTCCTCTTCCCTTTCTTGGGATGTCTACATGTATTTGCTTACTCCTTCCATCTTTTCTCTCTCATCCTTATGTTTTATGATTTATCTCAATCTTTCCTAATCTTTACTAGGTATTTTTTTGTGTAAATCAATTGATTTTCATCAAAAAACTTGAAACATAAGCGGTGTTCTATGCCAAATAACATTGAATTCTTTTTATGCTGCCTCAGTTTCACCAAGCTCATATATTTTATTTTATTTTACTTTTCATAGGTGAACAAGCGAAAACCTTACCACAGTGTCAACTTCGTGATTGCCCATGATGGCTTTACTTTGTATGACCTTGTTTCATACAATAATAAGGTATCAGTTACGTTTACTGCTCTTTATTGTTTTGAAACATGAAACTTGTACATCATCTGGATTCGGAATGGTGAAAATTACAGCACAATGATGCGAATGGTGAAGGTGGCAATGATGGATGCAATGACAATTTCAGTTGGAATTGTGGTATTGAAGGTAAAGATGAGGTTTTGATCCCACTTATTTTTTTTTCCTTTCATACTTCCTGATTTCCCTGGTATGAACTAAAACTTTTGTTGCGCCTTCACGTTCTTGCTTGCATAACAAGCTATTAATTTCCTCTATCATGCTTGGTACTTTAACTGTTTAACTAAGATTAAGTTGTTCTCTCTTTACTTGAGGGAGCATATGCTATTCCGAAGTCCAAGACTTTTAGCAATAATTTTCTTCCAAGGATGGGTGCTGAGGATGTAAAGTTTGTTATATCCTCCAGATATTAAGCCCTACCTGTTTTGTTTCTCTTGCTTTTGTTTAACATTGTGTCACTACCAATTATGTGTTATTTGTAATCTCAAACTCCTGGTCTACTGTATAGTGTTAAATAATAAGGGTCTGCATAGTAGCACCAAAGGGTGTGGCCTAGTGGTTAATGAAGTGATTGAGAACCCCGAGGTCTCAGGTTTAAAACTCAGCGGAACTAGATGATTCTTCCCATCTATCCTAGCCTTGGTGGACAAAGTTACCTGGTACCTGATGTTGGTTGGAGGTGACAGGTTAGAGAGACATGGTTGGTTGAAAAGAGTACTAGCCAAGTATTAGCAAAAAAATGAAATAAAATTGGACCAGAGGGTATATTTCAGAAAATACAATCAGATTCTCTTGATAAATGTCCCTGGAAACTAAACTGGTCTACTGTTGACTCAAAACAAACTCCTGAGTGCAAGAAGAAATGGCAGATGTCACCCGTAAAACAAAGAATTCTCTGGAATTGAATATATAATTTTCCGGTGGACGGAATAAGAAGATATCTTAATGGATAGCCTCAGAATTATCTGTCGAATACGACAGAAGAAAAATTGTCAGAAGTTGGGTGGTATACCAAACACACACCCCATCACGTTAATCACGTGCTCGCCGGAACCCTAGTGTTTATCAACGCGTGAGACTTCATCTGCCTAATAACTCGACTGGGGTTTGATCTCCAGGGCGCTGAATCATGGTAATGTTGGTTTTCACACATCACCGAAAGAGGGATAACATAAATCAGATCTGAACAGTCACTAGACAGAATCCACAGCAACTGACTTTTTGCCCTAGATGTTTCTCACTGTTGCTAGGATATCATGTGAGAAATAAAGGTACTGAAAAATATTACTAAAATGTATGTACATAACCCCTATTTATAATTATATTCTACGCAGCACATATTACATAGTAATGCTTTTCCATGTGAGACACTATATACATTAATATTCCAACACTTTCTTCTAATGATTTAAATCAGGAAAAAGACATAATGGATTGTTGTAGCCAGCAGTGATGTGGCAAATACAGAAGTGTGACCATGAATATGATGTGTTTGCTCATACTAGTAAAACAACTAGTTGTAAGTCTTCTGAATGGTTATGCCTGTCCTCCAAGAATGAAGTGAATACTGTATTGAGGTAGATGTTAGTGGAATACCCAGCTGGACATACCAGCCACGAAAAGAGAGTGCAGGTTCAAAACAAGTAGTGTAGATTATAAAATAATATAACATGAACAAATGATGAATTCATCCTTCCAACTAGATAATAATGCCTTGACTGCGATACATTGATTTTTGGCTTTAATAAACTAGCTTTGTCCACTTGTACACTGAGCCTTTGCTTGCCTATGATATTTTTTTTCTGTAGTATATTCCATTTCAGATCTACTTTGCTGTTATTGTCTTCAGACTTCATTGACAGACTCATATCAGTATCCATTTATCATTTTTTTCCTTCGTTCATGGACACAATGTACTAGATTCAGAATCTAAGGTCAGCCCAAGCCCCAAGCTTTAATCTAATTGCAATCCGCACCTACTAACTGAAACAGTTTCCACACTGAAGTATTTCGTTTATGAGTGATGGTATTGTTTCAAATCCAGTCTGAAAGGCTATCATCTTCTTGTATCTTCTTCCAGGTGAAACTTCAGATGCAAATGTTAACGAACTGCGTTCACGGCAAATGAAAAATTTTCATTTGGCACTGATGGTTTCTCAGGTGTGATGCATCATCCGTTCAGTTAACAGCATATGCGTTTCTTTTCTTGCGTATATTGAGAATTAGTCGGTAGCTTATATACTAGATCTCATAATTCTATTTGTCCTTAGTTCACAAATTCTATTTTTTCTCTCATTATTTTTTTTTTGCGACTATTGAGTTATTTGTTTACAGTATTTCTCCCTCATTGTTCAACCAGAAATAGAACACTGTCATGGAATTTTAGGGCCACACTTTTGACATATTATAGCAAATTTCAGATTTTAGTCTGTTTTATCTAATTTTGGTTGAAGTATTGGTTTCTGAAACCCTCATAAAAAGGATTATTTTGACATACTATGGATACTAATTTACTTGGTTATTATATCTTTCCTGGATTATGCCTGTCTTCAGTAATTTTCTTAATAGTGTCATATGCACATTAGATGTCCCAACCCTATTGTTGTTACTTAAGTTTACCTTCCTAAATTTTTGTACTTTCTTGGATTATAAGGGAACACCAATGATGCTTATGGGTGATGAGTACGGGCATACCCGCTATGGAAATAATAACAGTTATGGACATGATACCGCCATCAACAATTTCCAGTGGGGACAAGTATGATATTATGTTTTCTTGCTTGTACTTCTTTCCTGCTACTGCAAGTAACCCAGTGAACTTTGTCAATCCAGTTGGAAGCAAGGAGGAATGATCACTTCAGGTTCTTTTCCAAGATGATAAAGTTTCGACTGTCCCATAATGTTCTAAGAAAGGAAAATTTCATTGAGAAGGTAATGCTATTGTCTACCTGGTGTCATGCTTAACTTTACTGGCAATTGTATTACTAAGAGGTAATTTATTTTGAAAACTGAATGTTATGTTCTGTGTTTCATTTGTGGCAGTATCTTTGTCTTTAAATATTAATGCATCAGAAAAAGCTAATGAAAGAGTTCCCTGCAAAGAAATGATACCGAGTATGTGATCAAAACGGTAGTATTCCTATTTAGACCTTCCGTTTAATGGTTGGTGCTGGTGTAAGATAACCTGGGGGTACTCCAGGTACTGATCTAAGTTGAATGGTCAGAGTATTTGGGGTTCTCTTTGTGGAACATACTTAAATGGTGTTTCTTCACATGATATACAGTTAGTTTAGGTTGTCTCATCTATGATCCACTGGTCCATTTATTCACAGTATCCTTGTCAATGATCATATGTTTGGAAGATTTGATAAATGTTAGACCCCTCAACTACTGATGGTTCTCTTCAAGATGTTTGAGATTTTTCTAGCTATTTGAATCGTTTGGTGCCTCTGATTTTTCCAAATAGGTGGAAAGAAGCAAAAATTTGATCCAATAGGTGGAACTGTATATTGATTCATTTCTAATACATTATGGGTATTGTTTATCCAATGGGGGGAAGAAGGACAGAATTGATCTAATAGATGTAAGGAGGGCAGTTTTTTTAGCTATTTCAATGTTACGTTAAGGGCATTTTTGACCCTTTTCTGTTTTTTGTTTTTTTGGGTGGCAGTGGGGTTCCATTGTAGTACTTAGTGTTCTCTAGCTCTGCATAATGCTGTCTCAATTCGACTATTCTGATGGATTAGCAATCATTACTTTGCAGAACGACATTACCTGGCTCGAGGACAACTGGTACAATGAAGAGAGTAGATTCCTTGCATTTATGTAAGAATAAACCCTATTAATAATCTCCATCTTATCATCTCTGATTCTAAATCATGAATTCACTCACACACTAGAATCAGTCCTCTTTTTAGGCAAGTTTTTGTACGGATTGCCGCTATTTTGGGGTGGTCTTTAATTTTTACCCCTACTGCTCATTCAATGAAAATTTGTTGTCCAAAGTACCCTTAACTATGACTTAATTTCGCCGGAAAACCTTTTTGTATAATGTTTGCCCTAGGGCATCAGCTCAGTGCTATCAAATTCTTAAGGCAAACTTTATGCTTAATTTGTTTTAAAAAAAATTGTTAGGCATAGGTTATGCCCTATTAGGCACAAGTTCACACTACTGAACTTATGCCCCAAGACATAAGTTCGTGTATGAACTTCTTAAGGCATAATGTTTTAAAACCGAACTTATATCTCAAGGCACAAGTTATGATGCCATACAAGGCATTAGTAAAATTTTAGAACATTATGTTTTACTAGACATAAGTTTCGTGTTTGAACTTTATGCCTTAAGAAGACATATGACTGAACTTGTGCCCCAAGGCATAGGCATAAGTTATGCCTAAGGCAAAATAAATTTGCAAGGCATGGATTATACCTATAAGTTGTAAAAATGAACTTATGTCTTATAGGGCATAACCCGTGCCTAGTAAATTTTTATTATTAGGGGTATTTTCGTCTGCCGTTTTATTACTTTAAGTTCTGAATAGAAGATACTAGAAAGCCACGAATTTGAGTGAAAGAAGTTAAAAAACTACCCAAAATAGGGGCAATCATGTGAATGATCCTTTCTAAAGCTGTTTTCATATGGTCTGTTTCTTTTACACTGAGCTTTTTCGTGTTTTTCTTCTATCCCTTAATTTTCAGTTGCACCTGTGTTCTTGATTTTAATTTGTCAACCAAAAATTTTAATGTGACAAGCTCAAAATTTAGGAGCTTTTCTTTTCGCATGAGTGAATTTGCATATTGGATTCTCTTTTGTACAATGTAGGCTCCATGATGGGAATGGAGGAGATATTTACTTGGCATTTAATGCACACCACTTCTCCATCAAAACAGCAATACCTTCACCACCACGAAATAGAAGTTGGTACCGAGTGGTAAGCTATTCTTATTATTATTTTGTTTTTATTTTTTTTTAAAAACAATTACCCCTCCCTAGGAGCTCCACCTTATTGTCCTGTTATTAGTTAAAGGAATGCACTTCGTTTACACATCCAAAACATGAGATAGCCTCTGATTTTGCTCCTGCTCTGATAGTTTGGTTATTCTTTCTTGTATTTTGGATTTGTGCCTACTGATTTGGAAATTATAGGTCGAAGACAAAGTGTTGTATTATATCCTCATGTTAAC</genome_strand>
        <mrna_strand>GGCGATGCTGGCATGAAAGGAAATTTTGCAACCCGTATCGCAGGTTCAGCGGATCTGTACAGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAACAAGCGAAAGCCGTACCACAGTGTCAACTTCGTGATTGCCCATGATGGCTTTACCTTGTATGACCTTGTTTCATACAATAATAAG...................................................................................CACAATGATGCGAACGGTGAAGGTGGCAATGATGGATGCAATGACAACTTCAGTTGGAATTGTGGAATTGAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAAACTTCAGATGCAAATATTAACGCACTGCGTTCACGGCAAATGAAAAATTTTCATTTGGCACTGATGGTTTCTCAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAACACCAATGATGCTTATGGGGGATGAGTATGGGCATACCCGCTATGGAAATAATAACAGTTATGGACATGATACCGCCATCAACAATTTCCAGTGGGGACAA..........................................................................TTGGAAGCAAGGAAGAATGATCACTTCAGGTTCTTTTCCAAGATGATAAAGTTTCGACTGTCCCACAATGTTCTTAGAAAAGAAAGCTTCATTGAGAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGACATTACCTGGCTCGAGGACAACTGGCACAATGAAGAGAGTAGATTCCTTGCATTTAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCCATGATGGGAATGGAGGAGATATTTACTTGGCATTTAATGCACACCACTTCTCCATCAAAACAGCAATACCTTCACCACCACGAAATAGAAGTTGGTACCGAGTG.......................................................................................................................................................................................................................GGTGGACACTATCTGAATCACCAGATGATTTTGTTACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E451254" ref_strand="+" ref_description="SGN-E451254 [cSTS-12-O11]">
      <seq>atgggaagtaccgcgatgacatcaggagatttataaagggcgatgctggcatgaaaggaaattttgcaacccgtatcgcaggttcagcggatctgtacagagtgaacaagcgaaagccgtaccacagtgtcaacttcgtgattgcccatgatggctttaccttgtatgaccttgtttcatacaataataagcacaatgatgcgaacggtgaaggtggcaatgatggatgcaatgacaacttcagttggaattgtggaattgaaggtgaaacttcagatgcaaatattaacgcactgcgttcacggcaaatgaaaaattttcatttggcactgatggtttctcagggaacaccaatgatgcttatgggggatgagtatgggcatacccgctatggaaataataacagttatggacatgataccgccatcaacaatttccagtggggacaattggaagcaaggaagaatgatcacttcaggttcttttccaagatgataaagtttcgactgtcccacaatgttcttagaaaagaaagcttcattgagaagaacgacattacctggctcgaggacaactggcacaatgaagagagtagattccttgcatttatgctccatgatgggaatggaggagatatttacttggcatttaatgcacaccacttctccatcaaaacagcaataccttcaccaccacgaaatagaagttggtaccgagtggtggacactaatctga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="41705" stop="34870"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="41386" g_stop="41324" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="39" r_stop="101" r_length="63" r_score="0.984"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="41323" i_stop="40220" i_length="1104">
            <donor d_prob="0.545" d_score="0.98"/>
            <acceptor a_prob="0.996" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="40219" g_stop="40130" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="102" r_stop="191" r_length="90" r_score="0.967"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="40129" i_stop="40047" i_length="83">
            <donor d_prob="0.969" d_score="0.98"/>
            <acceptor a_prob="0.991" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="40046" g_stop="39974" g_length="73"/>
          <reference_exon_boundary r_type="cDNA" r_start="192" r_stop="264" r_length="73" r_score="0.959"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="39973" i_stop="38023" i_length="1951">
            <donor d_prob="0.982" d_score="0.96"/>
            <acceptor a_prob="0.983" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="38022" g_stop="37943" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="265" r_stop="344" r_length="80" r_score="0.975"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="37942" i_stop="37450" i_length="493">
            <donor d_prob="0.443" d_score="1.00"/>
            <acceptor a_prob="0.966" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="37449" g_stop="37345" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="345" r_stop="449" r_length="105" r_score="0.981"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="37344" i_stop="37271" i_length="74">
            <donor d_prob="0.884" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="37270" g_stop="37172" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="450" r_stop="548" r_length="99" r_score="0.939"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="37171" i_stop="36340" i_length="832">
            <donor d_prob="0.968" d_score="0.90"/>
            <acceptor a_prob="0.713" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="36339" g_stop="36278" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="549" r_stop="610" r_length="62" r_score="0.984"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="36277" i_stop="35281" i_length="997">
            <donor d_prob="0.980" d_score="0.98"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="35280" g_stop="35172" g_length="109"/>
          <reference_exon_boundary r_type="cDNA" r_start="611" r_stop="719" r_length="109" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E451254" ref_strand="+">
        <total_alignment_score>0.974</total_alignment_score>
        <cumulative_length_of_scored_exons>681</cumulative_length_of_scored_exons>
        <coverage percentage="0.927" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E451254" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="41386" e_stop="41324"/>
          <exon e_start="40219" e_stop="40130"/>
          <exon e_start="40046" e_stop="39974"/>
          <exon e_start="38022" e_stop="37943"/>
          <exon e_start="37449" e_stop="37345"/>
          <exon e_start="37270" e_stop="37172"/>
          <exon e_start="36339" e_stop="36278"/>
          <exon e_start="35280" e_stop="35172"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGCGATGCTGGCATGAAAGGAAATTTTGCAACCCGTATCGCAGGTTCAGCAGATCTGTACAGAGTAAGAGCTACAGCTTCCAGAATTATGCATTGACAACTAGAGAATATTCACAACACTGTTCCATTTGCTCTGCTTCTTAAGTACCTTTTCTTTCTTTACTGATAATATTTGAGAAACATTCAGTTCTATGTGGTAGCAAGTTGCTTCACCAGTCCTATTTGATTAGATAGGTTTAGCAAAGCATCTGATTTGTGTCAATGCATATGGCTAGATTCTATACGATCCTTTTTGTTTATTGAGTTAGTAGTAGTATTTATGTGTCAATTCCTTTATATTTTCATCGTACTTTATTAACATGATCATGCCATTTTACATGTAACTGTGAGTGCTATCACATAATATATCATTACACAGTTTGTTTTCATTTATTACCATCTCATTTAAGCTGATTTCATTTGGAATACCGAGTTTCTATTTATCCTTTCCTTTCATTGTAAAAGAAATCTTGTGGATTCTAACCATTTTTATTTAAGAACATAGTCTATCTTTTACTTGAAGTAAGTAGATAAAACTTCCTATTTATGAAATAAAAGATCAATTGTATTCAGAGGTTCTAGTTTTGTATTTGTGTTATTTACTTAAATATATAATCTTGAATCAAGTTTTAAGTTCTTTTCATTAAACTTTGTAGTCAAGGCACTGTACTATATCACTTTTCTGCACAAAAGTATCACGAGAACAAATAAAAAAGAGTTAATGAGTTCGTAAGTAAATAGGAGTCTTTCTCAGTCAAACTCTTTTTTTTTCCCTCCTCTTACCTCTCTGTGTACCTCATGGACTTCTCCTTTTCTTTTACTCACAAATCACTATTTTCTTCACTTGACATCCCACTCACTTCACACAACACTACCTCTCCTCTTCCCTTTCTTGGGATGTCTACATGTATTTGCTTACTCCTTCCATCTTTTCTCTCTCATCCTTATGTTTTATGATTTATCTCAATCTTTCCTAATCTTTACTAGGTATTTTTTTGTGTAAATCAATTGATTTTCATCAAAAAACTTGAAACATAAGCGGTGTTCTATGCCAAATAACATTGAATTCTTTTTATGCTGCCTCAGTTTCACCAAGCTCATATATTTTATTTTATTTTACTTTTCATAGGTGAACAAGCGAAAACCTTACCACAGTGTCAACTTCGTGATTGCCCATGATGGCTTTACTTTGTATGACCTTGTTTCATACAATAATAAGGTATCAGTTACGTTTACTGCTCTTTATTGTTTTGAAACATGAAACTTGTACATCATCTGGATTCGGAATGGTGAAAATTACAGCACAATGATGCGAATGGTGAAGGTGGCAATGATGGATGCAATGACAATTTCAGTTGGAATTGTGGTATTGAAGGTAAAGATGAGGTTTTGATCCCACTTATTTTTTTTTCCTTTCATACTTCCTGATTTCCCTGGTATGAACTAAAACTTTTGTTGCGCCTTCACGTTCTTGCTTGCATAACAAGCTATTAATTTCCTCTATCATGCTTGGTACTTTAACTGTTTAACTAAGATTAAGTTGTTCTCTCTTTACTTGAGGGAGCATATGCTATTCCGAAGTCCAAGACTTTTAGCAATAATTTTCTTCCAAGGATGGGTGCTGAGGATGTAAAGTTTGTTATATCCTCCAGATATTAAGCCCTACCTGTTTTGTTTCTCTTGCTTTTGTTTAACATTGTGTCACTACCAATTATGTGTTATTTGTAATCTCAAACTCCTGGTCTACTGTATAGTGTTAAATAATAAGGGTCTGCATAGTAGCACCAAAGGGTGTGGCCTAGTGGTTAATGAAGTGATTGAGAACCCCGAGGTCTCAGGTTTAAAACTCAGCGGAACTAGATGATTCTTCCCATCTATCCTAGCCTTGGTGGACAAAGTTACCTGGTACCTGATGTTGGTTGGAGGTGACAGGTTAGAGAGACATGGTTGGTTGAAAAGAGTACTAGCCAAGTATTAGCAAAAAAATGAAATAAAATTGGACCAGAGGGTATATTTCAGAAAATACAATCAGATTCTCTTGATAAATGTCCCTGGAAACTAAACTGGTCTACTGTTGACTCAAAACAAACTCCTGAGTGCAAGAAGAAATGGCAGATGTCACCCGTAAAACAAAGAATTCTCTGGAATTGAATATATAATTTTCCGGTGGACGGAATAAGAAGATATCTTAATGGATAGCCTCAGAATTATCTGTCGAATACGACAGAAGAAAAATTGTCAGAAGTTGGGTGGTATACCAAACACACACCCCATCACGTTAATCACGTGCTCGCCGGAACCCTAGTGTTTATCAACGCGTGAGACTTCATCTGCCTAATAACTCGACTGGGGTTTGATCTCCAGGGCGCTGAATCATGGTAATGTTGGTTTTCACACATCACCGAAAGAGGGATAACATAAATCAGATCTGAACAGTCACTAGACAGAATCCACAGCAACTGACTTTTTGCCCTAGATGTTTCTCACTGTTGCTAGGATATCATGTGAGAAATAAAGGTACTGAAAAATATTACTAAAATGTATGTACATAACCCCTATTTATAATTATATTCTACGCAGCACATATTACATAGTAATGCTTTTCCATGTGAGACACTATATACATTAATATTCCAACACTTTCTTCTAATGATTTAAATCAGGAAAAAGACATAATGGATTGTTGTAGCCAGCAGTGATGTGGCAAATACAGAAGTGTGACCATGAATATGATGTGTTTGCTCATACTAGTAAAACAACTAGTTGTAAGTCTTCTGAATGGTTATGCCTGTCCTCCAAGAATGAAGTGAATACTGTATTGAGGTAGATGTTAGTGGAATACCCAGCTGGACATACCAGCCACGAAAAGAGAGTGCAGGTTCAAAACAAGTAGTGTAGATTATAAAATAATATAACATGAACAAATGATGAATTCATCCTTCCAACTAGATAATAATGCCTTGACTGCGATACATTGATTTTTGGCTTTAATAAACTAGCTTTGTCCACTTGTACACTGAGCCTTTGCTTGCCTATGATATTTTTTTTCTGTAGTATATTCCATTTCAGATCTACTTTGCTGTTATTGTCTTCAGACTTCATTGACAGACTCATATCAGTATCCATTTATCATTTTTTTCCTTCGTTCATGGACACAATGTACTAGATTCAGAATCTAAGGTCAGCCCAAGCCCCAAGCTTTAATCTAATTGCAATCCGCACCTACTAACTGAAACAGTTTCCACACTGAAGTATTTCGTTTATGAGTGATGGTATTGTTTCAAATCCAGTCTGAAAGGCTATCATCTTCTTGTATCTTCTTCCAGGTGAAACTTCAGATGCAAATGTTAACGAACTGCGTTCACGGCAAATGAAAAATTTTCATTTGGCACTGATGGTTTCTCAGGTGTGATGCATCATCCGTTCAGTTAACAGCATATGCGTTTCTTTTCTTGCGTATATTGAGAATTAGTCGGTAGCTTATATACTAGATCTCATAATTCTATTTGTCCTTAGTTCACAAATTCTATTTTTTCTCTCATTATTTTTTTTTTGCGACTATTGAGTTATTTGTTTACAGTATTTCTCCCTCATTGTTCAACCAGAAATAGAACACTGTCATGGAATTTTAGGGCCACACTTTTGACATATTATAGCAAATTTCAGATTTTAGTCTGTTTTATCTAATTTTGGTTGAAGTATTGGTTTCTGAAACCCTCATAAAAAGGATTATTTTGACATACTATGGATACTAATTTACTTGGTTATTATATCTTTCCTGGATTATGCCTGTCTTCAGTAATTTTCTTAATAGTGTCATATGCACATTAGATGTCCCAACCCTATTGTTGTTACTTAAGTTTACCTTCCTAAATTTTTGTACTTTCTTGGATTATAAGGGAACACCAATGATGCTTATGGGTGATGAGTACGGGCATACCCGCTATGGAAATAATAACAGTTATGGACATGATACCGCCATCAACAATTTCCAGTGGGGACAAGTATGATATTATGTTTTCTTGCTTGTACTTCTTTCCTGCTACTGCAAGTAACCCAGTGAACTTTGTCAATCCAGTTGGAAGCAAGGAGGAATGATCACTTCAGGTTCTTTTCCAAGATGATAAAGTTTCGACTGTCCCATAATGTTCTAAGAAAGGAAAATTTCATTGAGAAGGTAATGCTATTGTCTACCTGGTGTCATGCTTAACTTTACTGGCAATTGTATTACTAAGAGGTAATTTATTTTGAAAACTGAATGTTATGTTCTGTGTTTCATTTGTGGCAGTATCTTTGTCTTTAAATATTAATGCATCAGAAAAAGCTAATGAAAGAGTTCCCTGCAAAGAAATGATACCGAGTATGTGATCAAAACGGTAGTATTCCTATTTAGACCTTCCGTTTAATGGTTGGTGCTGGTGTAAGATAACCTGGGGGTACTCCAGGTACTGATCTAAGTTGAATGGTCAGAGTATTTGGGGTTCTCTTTGTGGAACATACTTAAATGGTGTTTCTTCACATGATATACAGTTAGTTTAGGTTGTCTCATCTATGATCCACTGGTCCATTTATTCACAGTATCCTTGTCAATGATCATATGTTTGGAAGATTTGATAAATGTTAGACCCCTCAACTACTGATGGTTCTCTTCAAGATGTTTGAGATTTTTCTAGCTATTTGAATCGTTTGGTGCCTCTGATTTTTCCAAATAGGTGGAAAGAAGCAAAAATTTGATCCAATAGGTGGAACTGTATATTGATTCATTTCTAATACATTATGGGTATTGTTTATCCAATGGGGGGAAGAAGGACAGAATTGATCTAATAGATGTAAGGAGGGCAGTTTTTTTAGCTATTTCAATGTTACGTTAAGGGCATTTTTGACCCTTTTCTGTTTTTTGTTTTTTTGGGTGGCAGTGGGGTTCCATTGTAGTACTTAGTGTTCTCTAGCTCTGCATAATGCTGTCTCAATTCGACTATTCTGATGGATTAGCAATCATTACTTTGCAGAACGACATTACCTGGCTCGAGGACAACTGGTACAATGAAGAGAGTAGATTCCTTGCATTTATGTAAGAATAAACCCTATTAATAATCTCCATCTTATCATCTCTGATTCTAAATCATGAATTCACTCACACACTAGAATCAGTCCTCTTTTTAGGCAAGTTTTTGTACGGATTGCCGCTATTTTGGGGTGGTCTTTAATTTTTACCCCTACTGCTCATTCAATGAAAATTTGTTGTCCAAAGTACCCTTAACTATGACTTAATTTCGCCGGAAAACCTTTTTGTATAATGTTTGCCCTAGGGCATCAGCTCAGTGCTATCAAATTCTTAAGGCAAACTTTATGCTTAATTTGTTTTAAAAAAAATTGTTAGGCATAGGTTATGCCCTATTAGGCACAAGTTCACACTACTGAACTTATGCCCCAAGACATAAGTTCGTGTATGAACTTCTTAAGGCATAATGTTTTAAAACCGAACTTATATCTCAAGGCACAAGTTATGATGCCATACAAGGCATTAGTAAAATTTTAGAACATTATGTTTTACTAGACATAAGTTTCGTGTTTGAACTTTATGCCTTAAGAAGACATATGACTGAACTTGTGCCCCAAGGCATAGGCATAAGTTATGCCTAAGGCAAAATAAATTTGCAAGGCATGGATTATACCTATAAGTTGTAAAAATGAACTTATGTCTTATAGGGCATAACCCGTGCCTAGTAAATTTTTATTATTAGGGGTATTTTCGTCTGCCGTTTTATTACTTTAAGTTCTGAATAGAAGATACTAGAAAGCCACGAATTTGAGTGAAAGAAGTTAAAAAACTACCCAAAATAGGGGCAATCATGTGAATGATCCTTTCTAAAGCTGTTTTCATATGGTCTGTTTCTTTTACACTGAGCTTTTTCGTGTTTTTCTTCTATCCCTTAATTTTCAGTTGCACCTGTGTTCTTGATTTTAATTTGTCAACCAAAAATTTTAATGTGACAAGCTCAAAATTTAGGAGCTTTTCTTTTCGCATGAGTGAATTTGCATATTGGATTCTCTTTTGTACAATGTAGGCTCCATGATGGGAATGGAGGAGATATTTACTTGGCATTTAATGCACACCACTTCTCCATCAAAACAGCAATACCTTCACCACCACGAAATAGAAGTTGGTACCGAGTG</genome_strand>
        <mrna_strand>GGCGATGCTGGCATGAAAGGAAATTTTGCAACCCGTATCGCAGGTTCAGCGGATCTGTACAGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAACAAGCGAAAGCCGTACCACAGTGTCAACTTCGTGATTGCCCATGATGGCTTTACCTTGTATGACCTTGTTTCATACAATAATAAG...................................................................................CACAATGATGCGAACGGTGAAGGTGGCAATGATGGATGCAATGACAACTTCAGTTGGAATTGTGGAATTGAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAAACTTCAGATGCAAATATTAACGCACTGCGTTCACGGCAAATGAAAAATTTTCATTTGGCACTGATGGTTTCTCAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAACACCAATGATGCTTATGGGGGATGAGTATGGGCATACCCGCTATGGAAATAATAACAGTTATGGACATGATACCGCCATCAACAATTTCCAGTGGGGACAA..........................................................................TTGGAAGCAAGGAAGAATGATCACTTCAGGTTCTTTTCCAAGATGATAAAGTTTCGACTGTCCCACAATGTTCTTAGAAAAGAAAGCTTCATTGAGAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGACATTACCTGGCTCGAGGACAACTGGCACAATGAAGAGAGTAGATTCCTTGCATTTAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCCATGATGGGAATGGAGGAGATATTTACTTGGCATTTAATGCACACCACTTCTCCATCAAAACAGCAATACCTTCACCACCACGAAATAGAAGTTGGTACCGAGTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E707768" ref_strand="+" ref_description="SGN-E707768 [FA33DF12]">
      <seq>cccttttgccaggtaatacttttaactgcaaccatcctaccgtcatggaacttatacttgaaagcttaagacactgagggacagatggtactcccattaatgctccccccttggttaaggccatttccagagatagtgtattgtcgaggtgcaaaattattgctgagccatgggattgtggaggcctatatcttgttgggaagtttccgaactgggaccggtgggctgagtggaacgggaagtaccgtgatgacatcagaagatttataaagggcgatgctggcatgaaaggaaattttgcaacccgtatcgcaggttcagcagatctgtacagagtgaacaagcgaaaaccttaccacagtgtcaacttcgtgattgcccatgatggctttactttgtatgaccttgtttcatacaataataagcacaatgatgcgaatggtgaaggtggcaatgatggatgcaatgacaatttcagttggaattgtggtattgaaggtgaaacttcagatgcaaatgttaacgaactgcgttcacggcaaatgaaaaattttcatttggcactgatggtttctcagggaacaccaatgatgcttatgggtgatgagtacgggcatacccgctatggaaataataacagttatggacatgataccgccatcaacaatttccagtggggacaattggaagcaaggaggaatgatcacttcaggttcttttccaagatgataaagtttcgactgtcccataatgttctaagaaaggaaaatttcattgagaagaacgacattacctggctcgaggacaactggtacaatga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="46077" stop="36002"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="45770" g_stop="45707" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="13" r_stop="76" r_length="64" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="45706" i_stop="44757" i_length="950">
            <donor d_prob="0.957" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="44756" g_stop="44714" g_length="43"/>
          <reference_exon_boundary r_type="cDNA" r_start="77" r_stop="119" r_length="43" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="44713" i_stop="44372" i_length="342">
            <donor d_prob="0.767" d_score="1.00"/>
            <acceptor a_prob="0.615" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="44371" g_stop="44271" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="120" r_stop="220" r_length="101" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="44270" i_stop="42439" i_length="1832">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="42438" g_stop="42387" g_length="52"/>
          <reference_exon_boundary r_type="cDNA" r_start="221" r_stop="272" r_length="52" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="42386" i_stop="41387" i_length="1000">
            <donor d_prob="0.959" d_score="1.00"/>
            <acceptor a_prob="0.969" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="41386" g_stop="41324" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="273" r_stop="335" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="41323" i_stop="40220" i_length="1104">
            <donor d_prob="0.545" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="40219" g_stop="40130" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="336" r_stop="425" r_length="90" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="40129" i_stop="40047" i_length="83">
            <donor d_prob="0.969" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="40046" g_stop="39974" g_length="73"/>
          <reference_exon_boundary r_type="cDNA" r_start="426" r_stop="498" r_length="73" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="39973" i_stop="38023" i_length="1951">
            <donor d_prob="0.982" d_score="1.00"/>
            <acceptor a_prob="0.983" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="38022" g_stop="37943" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="499" r_stop="578" r_length="80" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="37942" i_stop="37450" i_length="493">
            <donor d_prob="0.443" d_score="1.00"/>
            <acceptor a_prob="0.966" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="37449" g_stop="37345" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="579" r_stop="683" r_length="105" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="37344" i_stop="37271" i_length="74">
            <donor d_prob="0.884" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="37270" g_stop="37172" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="684" r_stop="782" r_length="99" r_score="1.000"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="37171" i_stop="36340" i_length="832">
            <donor d_prob="0.968" d_score="1.00"/>
            <acceptor a_prob="0.713" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="36339" g_stop="36302" g_length="38"/>
          <reference_exon_boundary r_type="cDNA" r_start="783" r_stop="820" r_length="38" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E707768" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>808</cumulative_length_of_scored_exons>
        <coverage percentage="0.985" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E707768" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="45770" e_stop="45707"/>
          <exon e_start="44756" e_stop="44714"/>
          <exon e_start="44371" e_stop="44271"/>
          <exon e_start="42438" e_stop="42387"/>
          <exon e_start="41386" e_stop="41324"/>
          <exon e_start="40219" e_stop="40130"/>
          <exon e_start="40046" e_stop="39974"/>
          <exon e_start="38022" e_stop="37943"/>
          <exon e_start="37449" e_stop="37345"/>
          <exon e_start="37270" e_stop="37172"/>
          <exon e_start="36339" e_stop="36302"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTAATACTTTTAACTGCAACCATCCTACCGTCATGGAACTTATACTTGAAAGCTTAAGACACTGGTACTCACTGATTGATATCAATATACTGTTATTTTAGTCAAAATTAAACTAAAGATTTTCTTAATGGATGCGGTTATTTTTTTTATGGCAAGGGTACCTGTTTTTGTGGATGTGGTTGTTGTTTTCATTTGTTTGCACAACACCAAAAAAAAAAAAACTTGCAAATTTCATTATTCTCCGTACTTGTTCAATGTCCATAAAGTGTGTCACAGGCACCTTTACTCTCCAATTTGTCTTATTCCCCTCTAGGGTCTTTTAGTGATAGCCTGATAGGCTCCACGGGTATTGGACAATCCCGTTTGAAATACTTAGTGGCTAGTGTATTATAATCAATAAGTTCTCTTTTTCTTTTCTGTTGCTGAAAAAAAGTAAATAGATAGACATATTTCTATAATTAGTTTGTTTCTCTTCTATCCCATATATCTATTTTAAATTATGTAATAATACATTTCTGATCTGGAAGCCTAGCTGGGGCAAGAATCTCAATATGTTATGACATAGCCTTGAGCCCTTAACCGACCTTTTACTCGGTCACATACACACAATGGTCTATGCAGACTTGCTGGTTGGTCAGTTGATGAGGATATATACTTCATCTTTGAATGCTTATAGTTTTCTTGAAATGCTGATATGTTCATAAAATTCACTATGTCGGCTTGCTCCTAGTGGATTTGATCGTCAACTGGATTAGTTTTTCCAGTCTTATTATCCCTCTCTTTTCGTCCTCTATTTCAATGGTCTTTTCATATGCTTGTTAATAGATGCGGTGCAGATACCTAACTGAAATTATTACTGGCAGAGTGATTTATCCTGGATGACTTGTTTGTTTCTTGACTAACTTTTTTTCATCTCCATTTGGTATCCTCTTCTACTTTTTGTTGGAGCAAATAAAGGGTCACCGAGTATCATGTCGATGGATTTCGCTTTGATCTTGCTAGTGTTCTTTGCAGAGGGACAGATGGTACTCCCATTAATGCTCCCCCCTTGGTTAAGGTGAAGCGTTTATATGCTTTTGTTTTTGATGGTGCATCAAAAAAGAAAATTGTGTGATGGAAAGTAAGTTAATAGTGAGGTGACTATTCCACTGCCATTAACAATTTTCATGTTCACCTCAACCCCTATCTATCATCATCTAGGATTATCTCCCTTCTTGTTTTATCTTCTTTTTTCTTGTCTCTTTGATTTCCCATGTCACTTAAAAATTCATTATAAATATGCTCAAGTCCAACTTTCCCTTGCTTAAGAAAAAGATGACTCCCTAAATTCAGAGAATGTTGAAAAGGATTACACGATGCATTAATGCTTGAGAATGATCAAGATGCTACATACTTGCAGGCCATTTCCAGAGATAGTGTATTGTCGAGGTGCAAAATTATTGCTGAGCCATGGGATTGTGGAGGCCTATATCTTGTTGGGAAGTTTCCGAACTGGGACCGGTAATATCTAAAAGAACTTTATTACTATATATTATTAGTTGGGCTTTTTTCATTTTTAGCACATGGCAGAAATTTATCACGTGCGCTAGTTGAAATAAACAAAACATATACACCTATATTATATGTATATTTATGTGACAATATGTATATTTATACTACAAAACCTATAAGCCGTATGATAGGGAGGTAACTGTCTTGTATCATTGGGGGGTAATCGGTGTACTCTATCTGCTGGCTATTTTGTAAATTAGATCACTAAAAGACATTTTACTTGATTTATCTCTTATTAATTTATCCTATAGTTGAAAAGGAGTGGAAGATCATCTAATGTGAATGTGAAAATTTGGTCAGTGACCTTGTTGGAGACCTAAAATTACTTTATATTATTAATTTGAGGCTACCAGCAGATCGTTGTTCGTAAACATGTCTGCTTGCAGCTCTCAAGGATGTTTTCGGTATTCTGAATTGTTGGAACTGTAAAGATACTGTATGAGATTGCTTTTGCAATTTTTGACAAAAGAACCAGCCCATATTCTATCTATAACCTAGGTCAGCCAAAAAGATGCAGTTAAGCTTTTCTACGCCTATTGGTCCCATGTATTTTCCTTGCATTTGTTTGGATTTCTGGAACACTTGTGGACCCCATTATTTTACCTGATGTTCATGAGACCAGACGCAGTTCAAATTCGATTTTCTTGAACAATTCTCAGTATGCAAAATTTACTATTACTATTGTATAGCAAAAATTAAAAATTAAAAATTATAACTTAGAACTTAAAACAAAAATTGGAAAAAGGCAATCACATACATATGATATATTTAATTATTTTTGTTTTCTCCTGATTAAAATGTTATTTTCAGAAGTCCTAAATATAAGGTTGCTTTGCGTTATACGTTCAATTTTATTCAATGTAACTACTTCATACAAGGTAAAATCTTCATCGCTTTTAAATTTCTAAAATTTCCGGGGTCTCTACTGTGTTTCAGATAGAGTAATCTTTGATGATTCCATCATCTATGATTGAGATATGAAAACTTCTGGATAGGTATCCTAAAATTTTGAACATTTCTATATATTTCAAATAAGGATTTAGCACATAAAATTTAGTTAATTTTAGAATGCTAATAATTATTTTTCAAATAAGGATTTAGCCAATTTTAAATACTAAATATATGAGTTTTTATATTTTTCAAATAATGAAAGATCTAATAGTTAGAACTTAATTAATTTTAAAATCCTAAATACTTGGATAATGTTTAAACAACAATTATTTTATGAAGTTGTAAATGATAATGTTGTCTATTATAAAGTCTTTTAATGAAGAGAAAATAATTCAATTAACATATCTAATAGTATAGATTAGCAACTCAAAAATCACCTAAAATTTCAAAATATTCAATATATGTACCTATAAAAGCTTTAATTGAAATTACTTTTTTATCGTGAAGTTTCATAGCATGTTCCTTATCTTTTTTTTTTTTAGAAAAGGGTAACCTTGTATTCACACCAAAAGATTCATCTATCCAAAAAATGATGAATTGGAAACTTACATCCCACATAGGGTATTCCTTACAAGTTTCCTTTGAAATCAACTAATTCTATTATCTCCCCTATCAGATTTTGTTTACACCAAAAAAAAAAAAGGTTAAACAATTCATTCTAATTTTCTGTAAGTTAAGTTTTTTTGTCCATCAAAGCACTTTGAGTTCCTTCCTTTCCAAAGAGTCCACCATATGCATGCGTGGATAGTTCTCCACCAGAATTCTTTTCTTCCTCTATTGCCAATACCTTTCCACCATGGCATGTTCCTTATCTTGATAAACATATGCAGGTGGGCTGAGTGGAACGGGAAGTACCGTGATGACATCAGAAGATTTATAAAGGTGACACCAATAGGAGAGAATCTGAATTTAAATTTCATTACATTTAAGTTTGTCAGTACAAACTTTTCCATTATCTGACCAATCAAGTGCATCTGAAAGCAACAGAAAAGGGACTAAATGTTTTCCACTGATATTAGCAGGTTTAAATTTCATATATTCATGATTTTAACATAAAATGGTAGACTTCTAGTTATGAAGCTAAAATTCACTCTACTGGAAACATCATTTTTTATTTAGTCCCTGTTCATTTTTACATTGTTAAGTCGGAACTTTAGTTTCTTTGGTGTATGTATCTTTTTTCCATTTTCAACTATTGAGAACCAAACAAGATTTTACAATTATACCAATTCACGCTGTTTTGACCATCCTACTGTGCCCCCTACCATAGAAAGCAGCTGCTAAAACTACATTTGGTACAGTTACACATTAATCCTCAGGCACTTGACAAGTACATACATATTCATAATCTGGGACAATTGTGGAATTTCCAGAGATGTATATTAGAATATGAATTGGAGATTCCAGGCACTAGTAATTGATATCTTCTAATTCAAATGCATTCATCCTTTAAGTGTAATGATAGTTGGATTTGCCATTTTAGTCTTTAAAATTAAGGCTTTGTTTTTCATGTAATGCGACTCCTAATATAACTTAACTGTTTAAAGATATAAGGAGATACAAGTGTTTTATTCAGTATATTCTAACTTTGACATTACAAATTATACTTAGCATAATCATTGAATGAAACTCTTGGAATTTTGAAATTACACTAACATTTTCTATATATTATGACTCAATTCTCAGGTTTGTTTGTTTATTATATGAAGTTGTGAGAATATAGATATTATCGGATTATCTCAATAATAACAGGAGAGAGTGTGTACTTTTTTTTATTGGAACTGGTAGTGTTGTATTCCTCGGAATTAAGGTATGATGGAGACTTCCAAAAAGGTAACAACAAGCTAAAACAAGAGACTGATTATCCTGAATGATTGAACAGGGCGATGCTGGCATGAAAGGAAATTTTGCAACCCGTATCGCAGGTTCAGCAGATCTGTACAGAGTAAGAGCTACAGCTTCCAGAATTATGCATTGACAACTAGAGAATATTCACAACACTGTTCCATTTGCTCTGCTTCTTAAGTACCTTTTCTTTCTTTACTGATAATATTTGAGAAACATTCAGTTCTATGTGGTAGCAAGTTGCTTCACCAGTCCTATTTGATTAGATAGGTTTAGCAAAGCATCTGATTTGTGTCAATGCATATGGCTAGATTCTATACGATCCTTTTTGTTTATTGAGTTAGTAGTAGTATTTATGTGTCAATTCCTTTATATTTTCATCGTACTTTATTAACATGATCATGCCATTTTACATGTAACTGTGAGTGCTATCACATAATATATCATTACACAGTTTGTTTTCATTTATTACCATCTCATTTAAGCTGATTTCATTTGGAATACCGAGTTTCTATTTATCCTTTCCTTTCATTGTAAAAGAAATCTTGTGGATTCTAACCATTTTTATTTAAGAACATAGTCTATCTTTTACTTGAAGTAAGTAGATAAAACTTCCTATTTATGAAATAAAAGATCAATTGTATTCAGAGGTTCTAGTTTTGTATTTGTGTTATTTACTTAAATATATAATCTTGAATCAAGTTTTAAGTTCTTTTCATTAAACTTTGTAGTCAAGGCACTGTACTATATCACTTTTCTGCACAAAAGTATCACGAGAACAAATAAAAAAGAGTTAATGAGTTCGTAAGTAAATAGGAGTCTTTCTCAGTCAAACTCTTTTTTTTTCCCTCCTCTTACCTCTCTGTGTACCTCATGGACTTCTCCTTTTCTTTTACTCACAAATCACTATTTTCTTCACTTGACATCCCACTCACTTCACACAACACTACCTCTCCTCTTCCCTTTCTTGGGATGTCTACATGTATTTGCTTACTCCTTCCATCTTTTCTCTCTCATCCTTATGTTTTATGATTTATCTCAATCTTTCCTAATCTTTACTAGGTATTTTTTTGTGTAAATCAATTGATTTTCATCAAAAAACTTGAAACATAAGCGGTGTTCTATGCCAAATAACATTGAATTCTTTTTATGCTGCCTCAGTTTCACCAAGCTCATATATTTTATTTTATTTTACTTTTCATAGGTGAACAAGCGAAAACCTTACCACAGTGTCAACTTCGTGATTGCCCATGATGGCTTTACTTTGTATGACCTTGTTTCATACAATAATAAGGTATCAGTTACGTTTACTGCTCTTTATTGTTTTGAAACATGAAACTTGTACATCATCTGGATTCGGAATGGTGAAAATTACAGCACAATGATGCGAATGGTGAAGGTGGCAATGATGGATGCAATGACAATTTCAGTTGGAATTGTGGTATTGAAGGTAAAGATGAGGTTTTGATCCCACTTATTTTTTTTTCCTTTCATACTTCCTGATTTCCCTGGTATGAACTAAAACTTTTGTTGCGCCTTCACGTTCTTGCTTGCATAACAAGCTATTAATTTCCTCTATCATGCTTGGTACTTTAACTGTTTAACTAAGATTAAGTTGTTCTCTCTTTACTTGAGGGAGCATATGCTATTCCGAAGTCCAAGACTTTTAGCAATAATTTTCTTCCAAGGATGGGTGCTGAGGATGTAAAGTTTGTTATATCCTCCAGATATTAAGCCCTACCTGTTTTGTTTCTCTTGCTTTTGTTTAACATTGTGTCACTACCAATTATGTGTTATTTGTAATCTCAAACTCCTGGTCTACTGTATAGTGTTAAATAATAAGGGTCTGCATAGTAGCACCAAAGGGTGTGGCCTAGTGGTTAATGAAGTGATTGAGAACCCCGAGGTCTCAGGTTTAAAACTCAGCGGAACTAGATGATTCTTCCCATCTATCCTAGCCTTGGTGGACAAAGTTACCTGGTACCTGATGTTGGTTGGAGGTGACAGGTTAGAGAGACATGGTTGGTTGAAAAGAGTACTAGCCAAGTATTAGCAAAAAAATGAAATAAAATTGGACCAGAGGGTATATTTCAGAAAATACAATCAGATTCTCTTGATAAATGTCCCTGGAAACTAAACTGGTCTACTGTTGACTCAAAACAAACTCCTGAGTGCAAGAAGAAATGGCAGATGTCACCCGTAAAACAAAGAATTCTCTGGAATTGAATATATAATTTTCCGGTGGACGGAATAAGAAGATATCTTAATGGATAGCCTCAGAATTATCTGTCGAATACGACAGAAGAAAAATTGTCAGAAGTTGGGTGGTATACCAAACACACACCCCATCACGTTAATCACGTGCTCGCCGGAACCCTAGTGTTTATCAACGCGTGAGACTTCATCTGCCTAATAACTCGACTGGGGTTTGATCTCCAGGGCGCTGAATCATGGTAATGTTGGTTTTCACACATCACCGAAAGAGGGATAACATAAATCAGATCTGAACAGTCACTAGACAGAATCCACAGCAACTGACTTTTTGCCCTAGATGTTTCTCACTGTTGCTAGGATATCATGTGAGAAATAAAGGTACTGAAAAATATTACTAAAATGTATGTACATAACCCCTATTTATAATTATATTCTACGCAGCACATATTACATAGTAATGCTTTTCCATGTGAGACACTATATACATTAATATTCCAACACTTTCTTCTAATGATTTAAATCAGGAAAAAGACATAATGGATTGTTGTAGCCAGCAGTGATGTGGCAAATACAGAAGTGTGACCATGAATATGATGTGTTTGCTCATACTAGTAAAACAACTAGTTGTAAGTCTTCTGAATGGTTATGCCTGTCCTCCAAGAATGAAGTGAATACTGTATTGAGGTAGATGTTAGTGGAATACCCAGCTGGACATACCAGCCACGAAAAGAGAGTGCAGGTTCAAAACAAGTAGTGTAGATTATAAAATAATATAACATGAACAAATGATGAATTCATCCTTCCAACTAGATAATAATGCCTTGACTGCGATACATTGATTTTTGGCTTTAATAAACTAGCTTTGTCCACTTGTACACTGAGCCTTTGCTTGCCTATGATATTTTTTTTCTGTAGTATATTCCATTTCAGATCTACTTTGCTGTTATTGTCTTCAGACTTCATTGACAGACTCATATCAGTATCCATTTATCATTTTTTTCCTTCGTTCATGGACACAATGTACTAGATTCAGAATCTAAGGTCAGCCCAAGCCCCAAGCTTTAATCTAATTGCAATCCGCACCTACTAACTGAAACAGTTTCCACACTGAAGTATTTCGTTTATGAGTGATGGTATTGTTTCAAATCCAGTCTGAAAGGCTATCATCTTCTTGTATCTTCTTCCAGGTGAAACTTCAGATGCAAATGTTAACGAACTGCGTTCACGGCAAATGAAAAATTTTCATTTGGCACTGATGGTTTCTCAGGTGTGATGCATCATCCGTTCAGTTAACAGCATATGCGTTTCTTTTCTTGCGTATATTGAGAATTAGTCGGTAGCTTATATACTAGATCTCATAATTCTATTTGTCCTTAGTTCACAAATTCTATTTTTTCTCTCATTATTTTTTTTTTGCGACTATTGAGTTATTTGTTTACAGTATTTCTCCCTCATTGTTCAACCAGAAATAGAACACTGTCATGGAATTTTAGGGCCACACTTTTGACATATTATAGCAAATTTCAGATTTTAGTCTGTTTTATCTAATTTTGGTTGAAGTATTGGTTTCTGAAACCCTCATAAAAAGGATTATTTTGACATACTATGGATACTAATTTACTTGGTTATTATATCTTTCCTGGATTATGCCTGTCTTCAGTAATTTTCTTAATAGTGTCATATGCACATTAGATGTCCCAACCCTATTGTTGTTACTTAAGTTTACCTTCCTAAATTTTTGTACTTTCTTGGATTATAAGGGAACACCAATGATGCTTATGGGTGATGAGTACGGGCATACCCGCTATGGAAATAATAACAGTTATGGACATGATACCGCCATCAACAATTTCCAGTGGGGACAAGTATGATATTATGTTTTCTTGCTTGTACTTCTTTCCTGCTACTGCAAGTAACCCAGTGAACTTTGTCAATCCAGTTGGAAGCAAGGAGGAATGATCACTTCAGGTTCTTTTCCAAGATGATAAAGTTTCGACTGTCCCATAATGTTCTAAGAAAGGAAAATTTCATTGAGAAGGTAATGCTATTGTCTACCTGGTGTCATGCTTAACTTTACTGGCAATTGTATTACTAAGAGGTAATTTATTTTGAAAACTGAATGTTATGTTCTGTGTTTCATTTGTGGCAGTATCTTTGTCTTTAAATATTAATGCATCAGAAAAAGCTAATGAAAGAGTTCCCTGCAAAGAAATGATACCGAGTATGTGATCAAAACGGTAGTATTCCTATTTAGACCTTCCGTTTAATGGTTGGTGCTGGTGTAAGATAACCTGGGGGTACTCCAGGTACTGATCTAAGTTGAATGGTCAGAGTATTTGGGGTTCTCTTTGTGGAACATACTTAAATGGTGTTTCTTCACATGATATACAGTTAGTTTAGGTTGTCTCATCTATGATCCACTGGTCCATTTATTCACAGTATCCTTGTCAATGATCATATGTTTGGAAGATTTGATAAATGTTAGACCCCTCAACTACTGATGGTTCTCTTCAAGATGTTTGAGATTTTTCTAGCTATTTGAATCGTTTGGTGCCTCTGATTTTTCCAAATAGGTGGAAAGAAGCAAAAATTTGATCCAATAGGTGGAACTGTATATTGATTCATTTCTAATACATTATGGGTATTGTTTATCCAATGGGGGGAAGAAGGACAGAATTGATCTAATAGATGTAAGGAGGGCAGTTTTTTTAGCTATTTCAATGTTACGTTAAGGGCATTTTTGACCCTTTTCTGTTTTTTGTTTTTTTGGGTGGCAGTGGGGTTCCATTGTAGTACTTAGTGTTCTCTAGCTCTGCATAATGCTGTCTCAATTCGACTATTCTGATGGATTAGCAATCATTACTTTGCAGAACGACATTACCTGGCTCGAGGACAACTGGTACAATGA</genome_strand>
        <mrna_strand>GTAATACTTTTAACTGCAACCATCCTACCGTCATGGAACTTATACTTGAAAGCTTAAGACACTG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGGACAGATGGTACTCCCATTAATGCTCCCCCCTTGGTTAAG......................................................................................................................................................................................................................................................................................................................................................GCCATTTCCAGAGATAGTGTATTGTCGAGGTGCAAAATTATTGCTGAGCCATGGGATTGTGGAGGCCTATATCTTGTTGGGAAGTTTCCGAACTGGGACCG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGGCTGAGTGGAACGGGAAGTACCGTGATGACATCAGAAGATTTATAAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGATGCTGGCATGAAAGGAAATTTTGCAACCCGTATCGCAGGTTCAGCAGATCTGTACAGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAACAAGCGAAAACCTTACCACAGTGTCAACTTCGTGATTGCCCATGATGGCTTTACTTTGTATGACCTTGTTTCATACAATAATAAG...................................................................................CACAATGATGCGAATGGTGAAGGTGGCAATGATGGATGCAATGACAATTTCAGTTGGAATTGTGGTATTGAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAAACTTCAGATGCAAATGTTAACGAACTGCGTTCACGGCAAATGAAAAATTTTCATTTGGCACTGATGGTTTCTCAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAACACCAATGATGCTTATGGGTGATGAGTACGGGCATACCCGCTATGGAAATAATAACAGTTATGGACATGATACCGCCATCAACAATTTCCAGTGGGGACAA..........................................................................TTGGAAGCAAGGAGGAATGATCACTTCAGGTTCTTTTCCAAGATGATAAAGTTTCGACTGTCCCATAATGTTCTAAGAAAGGAAAATTTCATTGAGAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGACATTACCTGGCTCGAGGACAACTGGTACAATGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E731172" ref_strand="+" ref_description="SGN-E731172 [LA26BD11]">
      <seq>ttcgctttgatcttgctagtgttctttgcagagggacagatggtactcccattaatgctccccccttggttaaggccatttccagagatagtgtattgtcaaggtgcaaaattattgctgagccatgggattgtggaggcctatatcttgttgggaagtttccgaactgggaccggtgggctgagtggaacgggaagtaccgtgatgacatcataacatttataaagggcgatgctggcatgaaaggaaattttgcaacccgtatcgcaggttcagcagatctgtacagagtgaacaagcgaaaaccttaccacagtgtcaacttcgtgattgcccatgatggctttactttgtatgaccttgtttcatacaataataagcacaatgatgcgaatggtgaaggtggcaatgatggatgcaatgacaatttcagttggaattgtggtattgaaggtgaaacttcagatgcaaatgttaacgaactgcgttcacggcaaatgaaagattttcatttggcactgatggtttctcaaggaacaccaatgatgcttatgggtgatgaatacgggcatacccgctatggaaataataacagttatggacatgataccgccatcaacaatttccagtggggacaattgtaagcaatgatgaatgatcacttcaggttcttttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="45087" stop="36933"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="44787" g_stop="44714" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="74" r_length="74" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="44713" i_stop="44372" i_length="342">
            <donor d_prob="0.767" d_score="1.00"/>
            <acceptor a_prob="0.615" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="44371" g_stop="44271" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="75" r_stop="175" r_length="101" r_score="0.990"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="44270" i_stop="42439" i_length="1832">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="42438" g_stop="42387" g_length="52"/>
          <reference_exon_boundary r_type="cDNA" r_start="176" r_stop="227" r_length="52" r_score="0.962"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="42386" i_stop="41387" i_length="1000">
            <donor d_prob="0.959" d_score="0.96"/>
            <acceptor a_prob="0.969" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="41386" g_stop="41324" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="228" r_stop="290" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="41323" i_stop="40220" i_length="1104">
            <donor d_prob="0.545" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="40219" g_stop="40130" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="291" r_stop="380" r_length="90" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="40129" i_stop="40047" i_length="83">
            <donor d_prob="0.969" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="40046" g_stop="39974" g_length="73"/>
          <reference_exon_boundary r_type="cDNA" r_start="381" r_stop="453" r_length="73" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="39973" i_stop="38023" i_length="1951">
            <donor d_prob="0.982" d_score="1.00"/>
            <acceptor a_prob="0.983" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="38022" g_stop="37943" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="454" r_stop="533" r_length="80" r_score="0.975"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="37942" i_stop="37450" i_length="493">
            <donor d_prob="0.443" d_score="0.96"/>
            <acceptor a_prob="0.966" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="37449" g_stop="37345" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="534" r_stop="638" r_length="105" r_score="0.990"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="37344" i_stop="37271" i_length="74">
            <donor d_prob="0.884" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="37270" g_stop="37233" g_length="38"/>
          <reference_exon_boundary r_type="cDNA" r_start="639" r_stop="676" r_length="38" r_score="0.921"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E731172" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>676</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E731172" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="44787" e_stop="44714"/>
          <exon e_start="44371" e_stop="44271"/>
          <exon e_start="42438" e_stop="42387"/>
          <exon e_start="41386" e_stop="41324"/>
          <exon e_start="40219" e_stop="40130"/>
          <exon e_start="40046" e_stop="39974"/>
          <exon e_start="38022" e_stop="37943"/>
          <exon e_start="37449" e_stop="37345"/>
          <exon e_start="37270" e_stop="37233"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCGCTTTGATCTTGCTAGTGTTCTTTGCAGAGGGACAGATGGTACTCCCATTAATGCTCCCCCCTTGGTTAAGGTGAAGCGTTTATATGCTTTTGTTTTTGATGGTGCATCAAAAAAGAAAATTGTGTGATGGAAAGTAAGTTAATAGTGAGGTGACTATTCCACTGCCATTAACAATTTTCATGTTCACCTCAACCCCTATCTATCATCATCTAGGATTATCTCCCTTCTTGTTTTATCTTCTTTTTTCTTGTCTCTTTGATTTCCCATGTCACTTAAAAATTCATTATAAATATGCTCAAGTCCAACTTTCCCTTGCTTAAGAAAAAGATGACTCCCTAAATTCAGAGAATGTTGAAAAGGATTACACGATGCATTAATGCTTGAGAATGATCAAGATGCTACATACTTGCAGGCCATTTCCAGAGATAGTGTATTGTCGAGGTGCAAAATTATTGCTGAGCCATGGGATTGTGGAGGCCTATATCTTGTTGGGAAGTTTCCGAACTGGGACCGGTAATATCTAAAAGAACTTTATTACTATATATTATTAGTTGGGCTTTTTTCATTTTTAGCACATGGCAGAAATTTATCACGTGCGCTAGTTGAAATAAACAAAACATATACACCTATATTATATGTATATTTATGTGACAATATGTATATTTATACTACAAAACCTATAAGCCGTATGATAGGGAGGTAACTGTCTTGTATCATTGGGGGGTAATCGGTGTACTCTATCTGCTGGCTATTTTGTAAATTAGATCACTAAAAGACATTTTACTTGATTTATCTCTTATTAATTTATCCTATAGTTGAAAAGGAGTGGAAGATCATCTAATGTGAATGTGAAAATTTGGTCAGTGACCTTGTTGGAGACCTAAAATTACTTTATATTATTAATTTGAGGCTACCAGCAGATCGTTGTTCGTAAACATGTCTGCTTGCAGCTCTCAAGGATGTTTTCGGTATTCTGAATTGTTGGAACTGTAAAGATACTGTATGAGATTGCTTTTGCAATTTTTGACAAAAGAACCAGCCCATATTCTATCTATAACCTAGGTCAGCCAAAAAGATGCAGTTAAGCTTTTCTACGCCTATTGGTCCCATGTATTTTCCTTGCATTTGTTTGGATTTCTGGAACACTTGTGGACCCCATTATTTTACCTGATGTTCATGAGACCAGACGCAGTTCAAATTCGATTTTCTTGAACAATTCTCAGTATGCAAAATTTACTATTACTATTGTATAGCAAAAATTAAAAATTAAAAATTATAACTTAGAACTTAAAACAAAAATTGGAAAAAGGCAATCACATACATATGATATATTTAATTATTTTTGTTTTCTCCTGATTAAAATGTTATTTTCAGAAGTCCTAAATATAAGGTTGCTTTGCGTTATACGTTCAATTTTATTCAATGTAACTACTTCATACAAGGTAAAATCTTCATCGCTTTTAAATTTCTAAAATTTCCGGGGTCTCTACTGTGTTTCAGATAGAGTAATCTTTGATGATTCCATCATCTATGATTGAGATATGAAAACTTCTGGATAGGTATCCTAAAATTTTGAACATTTCTATATATTTCAAATAAGGATTTAGCACATAAAATTTAGTTAATTTTAGAATGCTAATAATTATTTTTCAAATAAGGATTTAGCCAATTTTAAATACTAAATATATGAGTTTTTATATTTTTCAAATAATGAAAGATCTAATAGTTAGAACTTAATTAATTTTAAAATCCTAAATACTTGGATAATGTTTAAACAACAATTATTTTATGAAGTTGTAAATGATAATGTTGTCTATTATAAAGTCTTTTAATGAAGAGAAAATAATTCAATTAACATATCTAATAGTATAGATTAGCAACTCAAAAATCACCTAAAATTTCAAAATATTCAATATATGTACCTATAAAAGCTTTAATTGAAATTACTTTTTTATCGTGAAGTTTCATAGCATGTTCCTTATCTTTTTTTTTTTTAGAAAAGGGTAACCTTGTATTCACACCAAAAGATTCATCTATCCAAAAAATGATGAATTGGAAACTTACATCCCACATAGGGTATTCCTTACAAGTTTCCTTTGAAATCAACTAATTCTATTATCTCCCCTATCAGATTTTGTTTACACCAAAAAAAAAAAAGGTTAAACAATTCATTCTAATTTTCTGTAAGTTAAGTTTTTTTGTCCATCAAAGCACTTTGAGTTCCTTCCTTTCCAAAGAGTCCACCATATGCATGCGTGGATAGTTCTCCACCAGAATTCTTTTCTTCCTCTATTGCCAATACCTTTCCACCATGGCATGTTCCTTATCTTGATAAACATATGCAGGTGGGCTGAGTGGAACGGGAAGTACCGTGATGACATCAGAAGATTTATAAAGGTGACACCAATAGGAGAGAATCTGAATTTAAATTTCATTACATTTAAGTTTGTCAGTACAAACTTTTCCATTATCTGACCAATCAAGTGCATCTGAAAGCAACAGAAAAGGGACTAAATGTTTTCCACTGATATTAGCAGGTTTAAATTTCATATATTCATGATTTTAACATAAAATGGTAGACTTCTAGTTATGAAGCTAAAATTCACTCTACTGGAAACATCATTTTTTATTTAGTCCCTGTTCATTTTTACATTGTTAAGTCGGAACTTTAGTTTCTTTGGTGTATGTATCTTTTTTCCATTTTCAACTATTGAGAACCAAACAAGATTTTACAATTATACCAATTCACGCTGTTTTGACCATCCTACTGTGCCCCCTACCATAGAAAGCAGCTGCTAAAACTACATTTGGTACAGTTACACATTAATCCTCAGGCACTTGACAAGTACATACATATTCATAATCTGGGACAATTGTGGAATTTCCAGAGATGTATATTAGAATATGAATTGGAGATTCCAGGCACTAGTAATTGATATCTTCTAATTCAAATGCATTCATCCTTTAAGTGTAATGATAGTTGGATTTGCCATTTTAGTCTTTAAAATTAAGGCTTTGTTTTTCATGTAATGCGACTCCTAATATAACTTAACTGTTTAAAGATATAAGGAGATACAAGTGTTTTATTCAGTATATTCTAACTTTGACATTACAAATTATACTTAGCATAATCATTGAATGAAACTCTTGGAATTTTGAAATTACACTAACATTTTCTATATATTATGACTCAATTCTCAGGTTTGTTTGTTTATTATATGAAGTTGTGAGAATATAGATATTATCGGATTATCTCAATAATAACAGGAGAGAGTGTGTACTTTTTTTTATTGGAACTGGTAGTGTTGTATTCCTCGGAATTAAGGTATGATGGAGACTTCCAAAAAGGTAACAACAAGCTAAAACAAGAGACTGATTATCCTGAATGATTGAACAGGGCGATGCTGGCATGAAAGGAAATTTTGCAACCCGTATCGCAGGTTCAGCAGATCTGTACAGAGTAAGAGCTACAGCTTCCAGAATTATGCATTGACAACTAGAGAATATTCACAACACTGTTCCATTTGCTCTGCTTCTTAAGTACCTTTTCTTTCTTTACTGATAATATTTGAGAAACATTCAGTTCTATGTGGTAGCAAGTTGCTTCACCAGTCCTATTTGATTAGATAGGTTTAGCAAAGCATCTGATTTGTGTCAATGCATATGGCTAGATTCTATACGATCCTTTTTGTTTATTGAGTTAGTAGTAGTATTTATGTGTCAATTCCTTTATATTTTCATCGTACTTTATTAACATGATCATGCCATTTTACATGTAACTGTGAGTGCTATCACATAATATATCATTACACAGTTTGTTTTCATTTATTACCATCTCATTTAAGCTGATTTCATTTGGAATACCGAGTTTCTATTTATCCTTTCCTTTCATTGTAAAAGAAATCTTGTGGATTCTAACCATTTTTATTTAAGAACATAGTCTATCTTTTACTTGAAGTAAGTAGATAAAACTTCCTATTTATGAAATAAAAGATCAATTGTATTCAGAGGTTCTAGTTTTGTATTTGTGTTATTTACTTAAATATATAATCTTGAATCAAGTTTTAAGTTCTTTTCATTAAACTTTGTAGTCAAGGCACTGTACTATATCACTTTTCTGCACAAAAGTATCACGAGAACAAATAAAAAAGAGTTAATGAGTTCGTAAGTAAATAGGAGTCTTTCTCAGTCAAACTCTTTTTTTTTCCCTCCTCTTACCTCTCTGTGTACCTCATGGACTTCTCCTTTTCTTTTACTCACAAATCACTATTTTCTTCACTTGACATCCCACTCACTTCACACAACACTACCTCTCCTCTTCCCTTTCTTGGGATGTCTACATGTATTTGCTTACTCCTTCCATCTTTTCTCTCTCATCCTTATGTTTTATGATTTATCTCAATCTTTCCTAATCTTTACTAGGTATTTTTTTGTGTAAATCAATTGATTTTCATCAAAAAACTTGAAACATAAGCGGTGTTCTATGCCAAATAACATTGAATTCTTTTTATGCTGCCTCAGTTTCACCAAGCTCATATATTTTATTTTATTTTACTTTTCATAGGTGAACAAGCGAAAACCTTACCACAGTGTCAACTTCGTGATTGCCCATGATGGCTTTACTTTGTATGACCTTGTTTCATACAATAATAAGGTATCAGTTACGTTTACTGCTCTTTATTGTTTTGAAACATGAAACTTGTACATCATCTGGATTCGGAATGGTGAAAATTACAGCACAATGATGCGAATGGTGAAGGTGGCAATGATGGATGCAATGACAATTTCAGTTGGAATTGTGGTATTGAAGGTAAAGATGAGGTTTTGATCCCACTTATTTTTTTTTCCTTTCATACTTCCTGATTTCCCTGGTATGAACTAAAACTTTTGTTGCGCCTTCACGTTCTTGCTTGCATAACAAGCTATTAATTTCCTCTATCATGCTTGGTACTTTAACTGTTTAACTAAGATTAAGTTGTTCTCTCTTTACTTGAGGGAGCATATGCTATTCCGAAGTCCAAGACTTTTAGCAATAATTTTCTTCCAAGGATGGGTGCTGAGGATGTAAAGTTTGTTATATCCTCCAGATATTAAGCCCTACCTGTTTTGTTTCTCTTGCTTTTGTTTAACATTGTGTCACTACCAATTATGTGTTATTTGTAATCTCAAACTCCTGGTCTACTGTATAGTGTTAAATAATAAGGGTCTGCATAGTAGCACCAAAGGGTGTGGCCTAGTGGTTAATGAAGTGATTGAGAACCCCGAGGTCTCAGGTTTAAAACTCAGCGGAACTAGATGATTCTTCCCATCTATCCTAGCCTTGGTGGACAAAGTTACCTGGTACCTGATGTTGGTTGGAGGTGACAGGTTAGAGAGACATGGTTGGTTGAAAAGAGTACTAGCCAAGTATTAGCAAAAAAATGAAATAAAATTGGACCAGAGGGTATATTTCAGAAAATACAATCAGATTCTCTTGATAAATGTCCCTGGAAACTAAACTGGTCTACTGTTGACTCAAAACAAACTCCTGAGTGCAAGAAGAAATGGCAGATGTCACCCGTAAAACAAAGAATTCTCTGGAATTGAATATATAATTTTCCGGTGGACGGAATAAGAAGATATCTTAATGGATAGCCTCAGAATTATCTGTCGAATACGACAGAAGAAAAATTGTCAGAAGTTGGGTGGTATACCAAACACACACCCCATCACGTTAATCACGTGCTCGCCGGAACCCTAGTGTTTATCAACGCGTGAGACTTCATCTGCCTAATAACTCGACTGGGGTTTGATCTCCAGGGCGCTGAATCATGGTAATGTTGGTTTTCACACATCACCGAAAGAGGGATAACATAAATCAGATCTGAACAGTCACTAGACAGAATCCACAGCAACTGACTTTTTGCCCTAGATGTTTCTCACTGTTGCTAGGATATCATGTGAGAAATAAAGGTACTGAAAAATATTACTAAAATGTATGTACATAACCCCTATTTATAATTATATTCTACGCAGCACATATTACATAGTAATGCTTTTCCATGTGAGACACTATATACATTAATATTCCAACACTTTCTTCTAATGATTTAAATCAGGAAAAAGACATAATGGATTGTTGTAGCCAGCAGTGATGTGGCAAATACAGAAGTGTGACCATGAATATGATGTGTTTGCTCATACTAGTAAAACAACTAGTTGTAAGTCTTCTGAATGGTTATGCCTGTCCTCCAAGAATGAAGTGAATACTGTATTGAGGTAGATGTTAGTGGAATACCCAGCTGGACATACCAGCCACGAAAAGAGAGTGCAGGTTCAAAACAAGTAGTGTAGATTATAAAATAATATAACATGAACAAATGATGAATTCATCCTTCCAACTAGATAATAATGCCTTGACTGCGATACATTGATTTTTGGCTTTAATAAACTAGCTTTGTCCACTTGTACACTGAGCCTTTGCTTGCCTATGATATTTTTTTTCTGTAGTATATTCCATTTCAGATCTACTTTGCTGTTATTGTCTTCAGACTTCATTGACAGACTCATATCAGTATCCATTTATCATTTTTTTCCTTCGTTCATGGACACAATGTACTAGATTCAGAATCTAAGGTCAGCCCAAGCCCCAAGCTTTAATCTAATTGCAATCCGCACCTACTAACTGAAACAGTTTCCACACTGAAGTATTTCGTTTATGAGTGATGGTATTGTTTCAAATCCAGTCTGAAAGGCTATCATCTTCTTGTATCTTCTTCCAGGTGAAACTTCAGATGCAAATGTTAACGAACTGCGTTCACGGCAAATGAAAAATTTTCATTTGGCACTGATGGTTTCTCAGGTGTGATGCATCATCCGTTCAGTTAACAGCATATGCGTTTCTTTTCTTGCGTATATTGAGAATTAGTCGGTAGCTTATATACTAGATCTCATAATTCTATTTGTCCTTAGTTCACAAATTCTATTTTTTCTCTCATTATTTTTTTTTTGCGACTATTGAGTTATTTGTTTACAGTATTTCTCCCTCATTGTTCAACCAGAAATAGAACACTGTCATGGAATTTTAGGGCCACACTTTTGACATATTATAGCAAATTTCAGATTTTAGTCTGTTTTATCTAATTTTGGTTGAAGTATTGGTTTCTGAAACCCTCATAAAAAGGATTATTTTGACATACTATGGATACTAATTTACTTGGTTATTATATCTTTCCTGGATTATGCCTGTCTTCAGTAATTTTCTTAATAGTGTCATATGCACATTAGATGTCCCAACCCTATTGTTGTTACTTAAGTTTACCTTCCTAAATTTTTGTACTTTCTTGGATTATAAGGGAACACCAATGATGCTTATGGGTGATGAGTACGGGCATACCCGCTATGGAAATAATAACAGTTATGGACATGATACCGCCATCAACAATTTCCAGTGGGGACAAGTATGATATTATGTTTTCTTGCTTGTACTTCTTTCCTGCTACTGCAAGTAACCCAGTGAACTTTGTCAATCCAGTTGGAAGCAAGGAGGAATGATCACTTCAGGTTCTTTTC</genome_strand>
        <mrna_strand>TTCGCTTTGATCTTGCTAGTGTTCTTTGCAGAGGGACAGATGGTACTCCCATTAATGCTCCCCCCTTGGTTAAG......................................................................................................................................................................................................................................................................................................................................................GCCATTTCCAGAGATAGTGTATTGTCAAGGTGCAAAATTATTGCTGAGCCATGGGATTGTGGAGGCCTATATCTTGTTGGGAAGTTTCCGAACTGGGACCG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGGCTGAGTGGAACGGGAAGTACCGTGATGACATCATAACATTTATAAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGATGCTGGCATGAAAGGAAATTTTGCAACCCGTATCGCAGGTTCAGCAGATCTGTACAGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAACAAGCGAAAACCTTACCACAGTGTCAACTTCGTGATTGCCCATGATGGCTTTACTTTGTATGACCTTGTTTCATACAATAATAAG...................................................................................CACAATGATGCGAATGGTGAAGGTGGCAATGATGGATGCAATGACAATTTCAGTTGGAATTGTGGTATTGAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAAACTTCAGATGCAAATGTTAACGAACTGCGTTCACGGCAAATGAAAGATTTTCATTTGGCACTGATGGTTTCTCAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAACACCAATGATGCTTATGGGTGATGAATACGGGCATACCCGCTATGGAAATAATAACAGTTATGGACATGATACCGCCATCAACAATTTCCAGTGGGGACAA..........................................................................TTGTAAGCAATGATGAATGATCACTTCAGGTTCTTTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E237532" ref_strand="+" ref_description="SGN-E237532 [cLED-19-F5]">
      <seq>gtttccgaactgggaccggtgggctgagtggaacgggaagtaccgtgatgacatcagaagatttataaagggcgatgctggcatgaaaggaaattttgcaacccgtatcgcaggttcagcagatctgtacagagtgaacaagcgaaaaccttaccacagtgtcaacttcgtgattgcccatgatggctttactttgtatgaccttgtttcatacaataataagcacaatgatgcgaatggtgaaggtggcaatgatggatgcaatgacaatttcagttggaattgtggtattgaaggtgaaacttcagatgcaaatgttaacgaactgcgttcacggcaaatgaaaaattttcatttggcactgatggtttctcagggaacaccaatgatgcttatgggtgatgagtacgggcatacccgctatggaaataataacagttatggacatgataccgccatcaacaatttccagtggggacaattggaagcaaggaggaatgatca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="44588" stop="36948"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="44288" g_stop="44271" g_length="18"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="18" r_length="18" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="44270" i_stop="42439" i_length="1832">
            <donor d_prob="0.996" d_score="0.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="42438" g_stop="42387" g_length="52"/>
          <reference_exon_boundary r_type="cDNA" r_start="19" r_stop="70" r_length="52" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="42386" i_stop="41387" i_length="1000">
            <donor d_prob="0.959" d_score="1.00"/>
            <acceptor a_prob="0.969" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="41386" g_stop="41324" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="71" r_stop="133" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="41323" i_stop="40220" i_length="1104">
            <donor d_prob="0.545" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="40219" g_stop="40130" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="134" r_stop="223" r_length="90" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="40129" i_stop="40047" i_length="83">
            <donor d_prob="0.969" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="40046" g_stop="39974" g_length="73"/>
          <reference_exon_boundary r_type="cDNA" r_start="224" r_stop="296" r_length="73" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="39973" i_stop="38023" i_length="1951">
            <donor d_prob="0.982" d_score="1.00"/>
            <acceptor a_prob="0.983" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="38022" g_stop="37943" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="297" r_stop="376" r_length="80" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="37942" i_stop="37450" i_length="493">
            <donor d_prob="0.443" d_score="1.00"/>
            <acceptor a_prob="0.966" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="37449" g_stop="37345" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="377" r_stop="481" r_length="105" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="37344" i_stop="37271" i_length="74">
            <donor d_prob="0.884" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="37270" g_stop="37248" g_length="23"/>
          <reference_exon_boundary r_type="cDNA" r_start="482" r_stop="504" r_length="23" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E237532" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>504</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E237532" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="44288" e_stop="44271"/>
          <exon e_start="42438" e_stop="42387"/>
          <exon e_start="41386" e_stop="41324"/>
          <exon e_start="40219" e_stop="40130"/>
          <exon e_start="40046" e_stop="39974"/>
          <exon e_start="38022" e_stop="37943"/>
          <exon e_start="37449" e_stop="37345"/>
          <exon e_start="37270" e_stop="37248"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTTCCGAACTGGGACCGGTAATATCTAAAAGAACTTTATTACTATATATTATTAGTTGGGCTTTTTTCATTTTTAGCACATGGCAGAAATTTATCACGTGCGCTAGTTGAAATAAACAAAACATATACACCTATATTATATGTATATTTATGTGACAATATGTATATTTATACTACAAAACCTATAAGCCGTATGATAGGGAGGTAACTGTCTTGTATCATTGGGGGGTAATCGGTGTACTCTATCTGCTGGCTATTTTGTAAATTAGATCACTAAAAGACATTTTACTTGATTTATCTCTTATTAATTTATCCTATAGTTGAAAAGGAGTGGAAGATCATCTAATGTGAATGTGAAAATTTGGTCAGTGACCTTGTTGGAGACCTAAAATTACTTTATATTATTAATTTGAGGCTACCAGCAGATCGTTGTTCGTAAACATGTCTGCTTGCAGCTCTCAAGGATGTTTTCGGTATTCTGAATTGTTGGAACTGTAAAGATACTGTATGAGATTGCTTTTGCAATTTTTGACAAAAGAACCAGCCCATATTCTATCTATAACCTAGGTCAGCCAAAAAGATGCAGTTAAGCTTTTCTACGCCTATTGGTCCCATGTATTTTCCTTGCATTTGTTTGGATTTCTGGAACACTTGTGGACCCCATTATTTTACCTGATGTTCATGAGACCAGACGCAGTTCAAATTCGATTTTCTTGAACAATTCTCAGTATGCAAAATTTACTATTACTATTGTATAGCAAAAATTAAAAATTAAAAATTATAACTTAGAACTTAAAACAAAAATTGGAAAAAGGCAATCACATACATATGATATATTTAATTATTTTTGTTTTCTCCTGATTAAAATGTTATTTTCAGAAGTCCTAAATATAAGGTTGCTTTGCGTTATACGTTCAATTTTATTCAATGTAACTACTTCATACAAGGTAAAATCTTCATCGCTTTTAAATTTCTAAAATTTCCGGGGTCTCTACTGTGTTTCAGATAGAGTAATCTTTGATGATTCCATCATCTATGATTGAGATATGAAAACTTCTGGATAGGTATCCTAAAATTTTGAACATTTCTATATATTTCAAATAAGGATTTAGCACATAAAATTTAGTTAATTTTAGAATGCTAATAATTATTTTTCAAATAAGGATTTAGCCAATTTTAAATACTAAATATATGAGTTTTTATATTTTTCAAATAATGAAAGATCTAATAGTTAGAACTTAATTAATTTTAAAATCCTAAATACTTGGATAATGTTTAAACAACAATTATTTTATGAAGTTGTAAATGATAATGTTGTCTATTATAAAGTCTTTTAATGAAGAGAAAATAATTCAATTAACATATCTAATAGTATAGATTAGCAACTCAAAAATCACCTAAAATTTCAAAATATTCAATATATGTACCTATAAAAGCTTTAATTGAAATTACTTTTTTATCGTGAAGTTTCATAGCATGTTCCTTATCTTTTTTTTTTTTAGAAAAGGGTAACCTTGTATTCACACCAAAAGATTCATCTATCCAAAAAATGATGAATTGGAAACTTACATCCCACATAGGGTATTCCTTACAAGTTTCCTTTGAAATCAACTAATTCTATTATCTCCCCTATCAGATTTTGTTTACACCAAAAAAAAAAAAGGTTAAACAATTCATTCTAATTTTCTGTAAGTTAAGTTTTTTTGTCCATCAAAGCACTTTGAGTTCCTTCCTTTCCAAAGAGTCCACCATATGCATGCGTGGATAGTTCTCCACCAGAATTCTTTTCTTCCTCTATTGCCAATACCTTTCCACCATGGCATGTTCCTTATCTTGATAAACATATGCAGGTGGGCTGAGTGGAACGGGAAGTACCGTGATGACATCAGAAGATTTATAAAGGTGACACCAATAGGAGAGAATCTGAATTTAAATTTCATTACATTTAAGTTTGTCAGTACAAACTTTTCCATTATCTGACCAATCAAGTGCATCTGAAAGCAACAGAAAAGGGACTAAATGTTTTCCACTGATATTAGCAGGTTTAAATTTCATATATTCATGATTTTAACATAAAATGGTAGACTTCTAGTTATGAAGCTAAAATTCACTCTACTGGAAACATCATTTTTTATTTAGTCCCTGTTCATTTTTACATTGTTAAGTCGGAACTTTAGTTTCTTTGGTGTATGTATCTTTTTTCCATTTTCAACTATTGAGAACCAAACAAGATTTTACAATTATACCAATTCACGCTGTTTTGACCATCCTACTGTGCCCCCTACCATAGAAAGCAGCTGCTAAAACTACATTTGGTACAGTTACACATTAATCCTCAGGCACTTGACAAGTACATACATATTCATAATCTGGGACAATTGTGGAATTTCCAGAGATGTATATTAGAATATGAATTGGAGATTCCAGGCACTAGTAATTGATATCTTCTAATTCAAATGCATTCATCCTTTAAGTGTAATGATAGTTGGATTTGCCATTTTAGTCTTTAAAATTAAGGCTTTGTTTTTCATGTAATGCGACTCCTAATATAACTTAACTGTTTAAAGATATAAGGAGATACAAGTGTTTTATTCAGTATATTCTAACTTTGACATTACAAATTATACTTAGCATAATCATTGAATGAAACTCTTGGAATTTTGAAATTACACTAACATTTTCTATATATTATGACTCAATTCTCAGGTTTGTTTGTTTATTATATGAAGTTGTGAGAATATAGATATTATCGGATTATCTCAATAATAACAGGAGAGAGTGTGTACTTTTTTTTATTGGAACTGGTAGTGTTGTATTCCTCGGAATTAAGGTATGATGGAGACTTCCAAAAAGGTAACAACAAGCTAAAACAAGAGACTGATTATCCTGAATGATTGAACAGGGCGATGCTGGCATGAAAGGAAATTTTGCAACCCGTATCGCAGGTTCAGCAGATCTGTACAGAGTAAGAGCTACAGCTTCCAGAATTATGCATTGACAACTAGAGAATATTCACAACACTGTTCCATTTGCTCTGCTTCTTAAGTACCTTTTCTTTCTTTACTGATAATATTTGAGAAACATTCAGTTCTATGTGGTAGCAAGTTGCTTCACCAGTCCTATTTGATTAGATAGGTTTAGCAAAGCATCTGATTTGTGTCAATGCATATGGCTAGATTCTATACGATCCTTTTTGTTTATTGAGTTAGTAGTAGTATTTATGTGTCAATTCCTTTATATTTTCATCGTACTTTATTAACATGATCATGCCATTTTACATGTAACTGTGAGTGCTATCACATAATATATCATTACACAGTTTGTTTTCATTTATTACCATCTCATTTAAGCTGATTTCATTTGGAATACCGAGTTTCTATTTATCCTTTCCTTTCATTGTAAAAGAAATCTTGTGGATTCTAACCATTTTTATTTAAGAACATAGTCTATCTTTTACTTGAAGTAAGTAGATAAAACTTCCTATTTATGAAATAAAAGATCAATTGTATTCAGAGGTTCTAGTTTTGTATTTGTGTTATTTACTTAAATATATAATCTTGAATCAAGTTTTAAGTTCTTTTCATTAAACTTTGTAGTCAAGGCACTGTACTATATCACTTTTCTGCACAAAAGTATCACGAGAACAAATAAAAAAGAGTTAATGAGTTCGTAAGTAAATAGGAGTCTTTCTCAGTCAAACTCTTTTTTTTTCCCTCCTCTTACCTCTCTGTGTACCTCATGGACTTCTCCTTTTCTTTTACTCACAAATCACTATTTTCTTCACTTGACATCCCACTCACTTCACACAACACTACCTCTCCTCTTCCCTTTCTTGGGATGTCTACATGTATTTGCTTACTCCTTCCATCTTTTCTCTCTCATCCTTATGTTTTATGATTTATCTCAATCTTTCCTAATCTTTACTAGGTATTTTTTTGTGTAAATCAATTGATTTTCATCAAAAAACTTGAAACATAAGCGGTGTTCTATGCCAAATAACATTGAATTCTTTTTATGCTGCCTCAGTTTCACCAAGCTCATATATTTTATTTTATTTTACTTTTCATAGGTGAACAAGCGAAAACCTTACCACAGTGTCAACTTCGTGATTGCCCATGATGGCTTTACTTTGTATGACCTTGTTTCATACAATAATAAGGTATCAGTTACGTTTACTGCTCTTTATTGTTTTGAAACATGAAACTTGTACATCATCTGGATTCGGAATGGTGAAAATTACAGCACAATGATGCGAATGGTGAAGGTGGCAATGATGGATGCAATGACAATTTCAGTTGGAATTGTGGTATTGAAGGTAAAGATGAGGTTTTGATCCCACTTATTTTTTTTTCCTTTCATACTTCCTGATTTCCCTGGTATGAACTAAAACTTTTGTTGCGCCTTCACGTTCTTGCTTGCATAACAAGCTATTAATTTCCTCTATCATGCTTGGTACTTTAACTGTTTAACTAAGATTAAGTTGTTCTCTCTTTACTTGAGGGAGCATATGCTATTCCGAAGTCCAAGACTTTTAGCAATAATTTTCTTCCAAGGATGGGTGCTGAGGATGTAAAGTTTGTTATATCCTCCAGATATTAAGCCCTACCTGTTTTGTTTCTCTTGCTTTTGTTTAACATTGTGTCACTACCAATTATGTGTTATTTGTAATCTCAAACTCCTGGTCTACTGTATAGTGTTAAATAATAAGGGTCTGCATAGTAGCACCAAAGGGTGTGGCCTAGTGGTTAATGAAGTGATTGAGAACCCCGAGGTCTCAGGTTTAAAACTCAGCGGAACTAGATGATTCTTCCCATCTATCCTAGCCTTGGTGGACAAAGTTACCTGGTACCTGATGTTGGTTGGAGGTGACAGGTTAGAGAGACATGGTTGGTTGAAAAGAGTACTAGCCAAGTATTAGCAAAAAAATGAAATAAAATTGGACCAGAGGGTATATTTCAGAAAATACAATCAGATTCTCTTGATAAATGTCCCTGGAAACTAAACTGGTCTACTGTTGACTCAAAACAAACTCCTGAGTGCAAGAAGAAATGGCAGATGTCACCCGTAAAACAAAGAATTCTCTGGAATTGAATATATAATTTTCCGGTGGACGGAATAAGAAGATATCTTAATGGATAGCCTCAGAATTATCTGTCGAATACGACAGAAGAAAAATTGTCAGAAGTTGGGTGGTATACCAAACACACACCCCATCACGTTAATCACGTGCTCGCCGGAACCCTAGTGTTTATCAACGCGTGAGACTTCATCTGCCTAATAACTCGACTGGGGTTTGATCTCCAGGGCGCTGAATCATGGTAATGTTGGTTTTCACACATCACCGAAAGAGGGATAACATAAATCAGATCTGAACAGTCACTAGACAGAATCCACAGCAACTGACTTTTTGCCCTAGATGTTTCTCACTGTTGCTAGGATATCATGTGAGAAATAAAGGTACTGAAAAATATTACTAAAATGTATGTACATAACCCCTATTTATAATTATATTCTACGCAGCACATATTACATAGTAATGCTTTTCCATGTGAGACACTATATACATTAATATTCCAACACTTTCTTCTAATGATTTAAATCAGGAAAAAGACATAATGGATTGTTGTAGCCAGCAGTGATGTGGCAAATACAGAAGTGTGACCATGAATATGATGTGTTTGCTCATACTAGTAAAACAACTAGTTGTAAGTCTTCTGAATGGTTATGCCTGTCCTCCAAGAATGAAGTGAATACTGTATTGAGGTAGATGTTAGTGGAATACCCAGCTGGACATACCAGCCACGAAAAGAGAGTGCAGGTTCAAAACAAGTAGTGTAGATTATAAAATAATATAACATGAACAAATGATGAATTCATCCTTCCAACTAGATAATAATGCCTTGACTGCGATACATTGATTTTTGGCTTTAATAAACTAGCTTTGTCCACTTGTACACTGAGCCTTTGCTTGCCTATGATATTTTTTTTCTGTAGTATATTCCATTTCAGATCTACTTTGCTGTTATTGTCTTCAGACTTCATTGACAGACTCATATCAGTATCCATTTATCATTTTTTTCCTTCGTTCATGGACACAATGTACTAGATTCAGAATCTAAGGTCAGCCCAAGCCCCAAGCTTTAATCTAATTGCAATCCGCACCTACTAACTGAAACAGTTTCCACACTGAAGTATTTCGTTTATGAGTGATGGTATTGTTTCAAATCCAGTCTGAAAGGCTATCATCTTCTTGTATCTTCTTCCAGGTGAAACTTCAGATGCAAATGTTAACGAACTGCGTTCACGGCAAATGAAAAATTTTCATTTGGCACTGATGGTTTCTCAGGTGTGATGCATCATCCGTTCAGTTAACAGCATATGCGTTTCTTTTCTTGCGTATATTGAGAATTAGTCGGTAGCTTATATACTAGATCTCATAATTCTATTTGTCCTTAGTTCACAAATTCTATTTTTTCTCTCATTATTTTTTTTTTGCGACTATTGAGTTATTTGTTTACAGTATTTCTCCCTCATTGTTCAACCAGAAATAGAACACTGTCATGGAATTTTAGGGCCACACTTTTGACATATTATAGCAAATTTCAGATTTTAGTCTGTTTTATCTAATTTTGGTTGAAGTATTGGTTTCTGAAACCCTCATAAAAAGGATTATTTTGACATACTATGGATACTAATTTACTTGGTTATTATATCTTTCCTGGATTATGCCTGTCTTCAGTAATTTTCTTAATAGTGTCATATGCACATTAGATGTCCCAACCCTATTGTTGTTACTTAAGTTTACCTTCCTAAATTTTTGTACTTTCTTGGATTATAAGGGAACACCAATGATGCTTATGGGTGATGAGTACGGGCATACCCGCTATGGAAATAATAACAGTTATGGACATGATACCGCCATCAACAATTTCCAGTGGGGACAAGTATGATATTATGTTTTCTTGCTTGTACTTCTTTCCTGCTACTGCAAGTAACCCAGTGAACTTTGTCAATCCAGTTGGAAGCAAGGAGGAATGATCA</genome_strand>
        <mrna_strand>GTTTCCGAACTGGGACCG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGGCTGAGTGGAACGGGAAGTACCGTGATGACATCAGAAGATTTATAAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGATGCTGGCATGAAAGGAAATTTTGCAACCCGTATCGCAGGTTCAGCAGATCTGTACAGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAACAAGCGAAAACCTTACCACAGTGTCAACTTCGTGATTGCCCATGATGGCTTTACTTTGTATGACCTTGTTTCATACAATAATAAG...................................................................................CACAATGATGCGAATGGTGAAGGTGGCAATGATGGATGCAATGACAATTTCAGTTGGAATTGTGGTATTGAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAAACTTCAGATGCAAATGTTAACGAACTGCGTTCACGGCAAATGAAAAATTTTCATTTGGCACTGATGGTTTCTCAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAACACCAATGATGCTTATGGGTGATGAGTACGGGCATACCCGCTATGGAAATAATAACAGTTATGGACATGATACCGCCATCAACAATTTCCAGTGGGGACAA..........................................................................TTGGAAGCAAGGAGGAATGATCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E583265" ref_strand="+" ref_description="SGN-E583265 [9086]">
      <seq>cacaaatgaagctgatgatgaaaacccatatacaanctcattccgaggaatagacaacaaggtttattacatggtagatttaaacaacaatgctcagctgctgaatttcgctggatgtggaaatacttttaactgcaaccatcctacagtcatggaacttatacttgaaagcttaagacactgggtcaccgcagtatcatgtcgatggatttcgctttgatcttgctagtgttctttgcagagggacagatggtactcccattaatgctcccccccttgttacggccatttccaaagataatgtattgtcaaggtgcaaaattattgctgagccatgggattgtggagggctatatcttgttggaaagtttccgaactgggaccggtgggctgagtggaatgggaagtaccgcgatgacatcaggagatttataaagggcgatgctggcatgaaaggaaattttgcaacccgtatcgcaggttcagcggatctgtacagagtgaacaagcgaaaagcggtaccacagtgtc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="48206" stop="41010"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="47906" g_stop="47846" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="61" r_length="61" r_score="0.984"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="47845" i_stop="47197" i_length="649">
            <donor d_prob="0.995" d_score="0.98"/>
            <acceptor a_prob="0.971" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="47196" g_stop="47139" g_length="58"/>
          <reference_exon_boundary r_type="cDNA" r_start="62" r_stop="119" r_length="58" r_score="0.966"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="47138" i_stop="45771" i_length="1368">
            <donor d_prob="0.928" d_score="0.96"/>
            <acceptor a_prob="0.978" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="45770" g_stop="45707" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="120" r_stop="183" r_length="64" r_score="0.969"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="45706" i_stop="44814" i_length="893">
            <donor d_prob="0.957" d_score="0.98"/>
            <acceptor a_prob="0.421" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="44813" g_stop="44714" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="184" r_stop="284" r_length="101" r_score="0.950"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="44713" i_stop="44372" i_length="342">
            <donor d_prob="0.767" d_score="0.94"/>
            <acceptor a_prob="0.615" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="44371" g_stop="44271" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="285" r_stop="385" r_length="101" r_score="0.950"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="44270" i_stop="42439" i_length="1832">
            <donor d_prob="0.996" d_score="0.96"/>
            <acceptor a_prob="0.994" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="42438" g_stop="42387" g_length="52"/>
          <reference_exon_boundary r_type="cDNA" r_start="386" r_stop="437" r_length="52" r_score="0.942"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="42386" i_stop="41387" i_length="1000">
            <donor d_prob="0.959" d_score="0.94"/>
            <acceptor a_prob="0.969" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="41386" g_stop="41324" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="438" r_stop="500" r_length="63" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E583265" ref_strand="+">
        <total_alignment_score>0.962</total_alignment_score>
        <cumulative_length_of_scored_exons>499</cumulative_length_of_scored_exons>
        <coverage percentage="0.940" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E583265" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="47906" e_stop="47846"/>
          <exon e_start="47196" e_stop="47139"/>
          <exon e_start="45770" e_stop="45707"/>
          <exon e_start="44813" e_stop="44714"/>
          <exon e_start="44371" e_stop="44271"/>
          <exon e_start="42438" e_stop="42387"/>
          <exon e_start="41386" e_stop="41324"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CACAAATGAAGCTGATGATGAAAACCCATATACAACCTCATTCCGAGGAATAGACAACAAGGTAAAGGAACTGTTCAACATAATAGTCAGTATTTGGAAAGTTATGAATTAGATCTTTATTGCACACAATGTACCTTGGTAGGTTACTTTGTCTAGGGAAACATCTACATTTTCTGGTAGCAGGTTCTGGGGGTGGGGTGGGGTATTGTGTTCGTTAACAGATAACCATTTTAGTAATCAACATCATCTTTGAACTAAGTCTTGATTGATGCATCCACCCGCCACAAGAAAAGTTGTTTGCGTAACTTTACGGAGCTGCTCAACTGGAGTGGCCTCTGATTATGGAATTTGGCAGTGTTTTTACTTTCTGTTCTGCAGATTATTATGGAGTGCATAATCTACTATCATATGTAGTTAAAATGCTAGAACTTGCTTCTTTTCCCCATTCCTCTGCTATAAATCTTCTCTGTAAATCTGCATCAGACCGATAGTTTAGATGAATTTAACTCAATTCTTTTTTTTTTCTCTATAATGCTTTGTCTCCCTCAAAAACCAGATGAGACCAGGCTTACTTTGTCAAGTTCTAAATCAAACTATTCATATCTGATGTTGTGGATGCAGTCTGAATTTCTGTTATTCTATACAAAAGATTTGTCTCTCTGTTTCCCCACCCTCTCATAAATGATATTTCCTTGCCCTCTCAATGGCAGGTTTATTACATGGTAGATTTGAACAACAATGCTCAGCTGCTGAATTTCTCTGGATGTGGTAATTTAACAATACACTTTTTTACCATTGAATAAAAGGAAAATCTGCAAAGGCAGTTCTGAACACATCTTTAAAATACTCTCCAGGATATTTCAATGGTTATTTGAAATTGTTAACCTGAGGCAGTTTCCTAAGGAGCAATTTTGGCAATGTTATAGGCGAATGATTTACTCAACTAGATTTTTACAAATATCACTCCACAAAAAATATATGTACGGAACGGTACAAAATATACAATAAGGGCCCGAAAGTGACCAAAAAAGACAAATATATACAACGAACCAAACCTCGAACCAAACCTCGGACCTGGTGTCACCGATATAAGAGCATCTAAAGTACAATAATAGGACTACAATCTGTCAAACAAAATACAAAATATATGGACCTACAAAAGAGAGAGAACAACAAGTCCCGAATGCCTAGAGCTCACCACGATCTAAGCAGCGACGGCCTCGTGAGATCAGGAATCAGCGAGGGTGGCTCGTAATAAGCATTGCATCAGAAAAAGATACAGAAGTGTAGTATGAGTACCAAAACACTTCTTACATTCACTTAGAGTGACTTCACTTCACGTCTTACAATGTGAGAACAAATTGGATTTGCTTCAGTACACTTATTACATTCACTAAGAGTGAGTTCACTACCATTAGAACCTCATTATCCCTTGCTATATTATATTTGCACCATCTTTGATCTTCACCCACATCAGTATTTCTTGCCCTGGTATTGCTCCTTGACAGAATAAAACATGTTCTCAGGAAGATCCTTGCTTTCTTTCACCATTCTTGTTGTCTACCCGTCTCAACTAGGTTTATTTTGTTTAACCCTTCTCAAATTAAATCAGGGTGAATCTAAAATTTAGCTCAATTTAACACTATTTAAGTTTAAAGAGTATTTGATTTTTAATATAATGGTTAGAAAGAATTTGTTCATCATTCCAAATGGATTCTTTACAGATTGGTTATTATTCACTTACTTCAACTGGTAATAATAATTGGAAATGTAATGAGGCAGTTATTTACTTATTTTTATGATGTTCCAGAAAGGATGTTGTCGCTTGATTATAAATTGACATATCCTGAAATATTTTCACATGGGAGTGAGGCCCAATTCTTTATTGCAGAAGGAATGTTATGGAGTTGAACCATGGAGGAAAAAGGGGAAAAGGTCTAATTACTAATGTTTATTTTACTCCATACTTGTCAGTTCTTAGTCCATGCAGTCATGGAACTTCAAGATTTATAATTGTGTTTGACGTTTTAATGCATACTCTTGCATATTTGCTTTTTCTTTCTTTTGCTTAAAAAGTTGTTATCTTCATTTAGTCTTTGGTAAGAATTCTGAGATGCAATTCTTTGGTCTTTCCAGGTAATACTTTTAACTGCAACCATCCTACCGTCATGGAACTTATACTTGAAAGCTTAAGACACTGGTACTCACTGATTGATATCAATATACTGTTATTTTAGTCAAAATTAAACTAAAGATTTTCTTAATGGATGCGGTTATTTTTTTTATGGCAAGGGTACCTGTTTTTGTGGATGTGGTTGTTGTTTTCATTTGTTTGCACAACACCAAAAAAAAAAAAACTTGCAAATTTCATTATTCTCCGTACTTGTTCAATGTCCATAAAGTGTGTCACAGGCACCTTTACTCTCCAATTTGTCTTATTCCCCTCTAGGGTCTTTTAGTGATAGCCTGATAGGCTCCACGGGTATTGGACAATCCCGTTTGAAATACTTAGTGGCTAGTGTATTATAATCAATAAGTTCTCTTTTTCTTTTCTGTTGCTGAAAAAAAGTAAATAGATAGACATATTTCTATAATTAGTTTGTTTCTCTTCTATCCCATATATCTATTTTAAATTATGTAATAATACATTTCTGATCTGGAAGCCTAGCTGGGGCAAGAATCTCAATATGTTATGACATAGCCTTGAGCCCTTAACCGACCTTTTACTCGGTCACATACACACAATGGTCTATGCAGACTTGCTGGTTGGTCAGTTGATGAGGATATATACTTCATCTTTGAATGCTTATAGTTTTCTTGAAATGCTGATATGTTCATAAAATTCACTATGTCGGCTTGCTCCTAGTGGATTTGATCGTCAACTGGATTAGTTTTTCCAGTCTTATTATCCCTCTCTTTTCGTCCTCTATTTCAATGGTCTTTTCATATGCTTGTTAATAGATGCGGTGCAGATACCTAACTGAAATTATTACTGGCAGAGTGATTTATCCTGGATGACTTGTTTGTTTCTTGACTAACTTTTTTTCATCTCCATTTGGTATCCTCTTCTACTTTTTGTTGGAGCAAATAAAGGGTCACCG-AGTATCATGTCGATGGATTTCGCTTTGATCTTGCTAGTGTTCTTTGCAGAGGGACAGATGGTACTCCCATTAATGCTCCCCCCTTGGTTAAGGTGAAGCGTTTATATGCTTTTGTTTTTGATGGTGCATCAAAAAAGAAAATTGTGTGATGGAAAGTAAGTTAATAGTGAGGTGACTATTCCACTGCCATTAACAATTTTCATGTTCACCTCAACCCCTATCTATCATCATCTAGGATTATCTCCCTTCTTGTTTTATCTTCTTTTTTCTTGTCTCTTTGATTTCCCATGTCACTTAAAAATTCATTATAAATATGCTCAAGTCCAACTTTCCCTTGCTTAAGAAAAAGATGACTCCCTAAATTCAGAGAATGTTGAAAAGGATTACACGATGCATTAATGCTTGAGAATGATCAAGATGCTACATACTTGCAGGCCATTTCCAGAGATAGTGTATTGTCGAGGTGCAAAATTATTGCTGAGCCATGGGATTGTGGAGGCCTATATCTTGTTGGGAAGTTTCCGAACTGGGACCGGTAATATCTAAAAGAACTTTATTACTATATATTATTAGTTGGGCTTTTTTCATTTTTAGCACATGGCAGAAATTTATCACGTGCGCTAGTTGAAATAAACAAAACATATACACCTATATTATATGTATATTTATGTGACAATATGTATATTTATACTACAAAACCTATAAGCCGTATGATAGGGAGGTAACTGTCTTGTATCATTGGGGGGTAATCGGTGTACTCTATCTGCTGGCTATTTTGTAAATTAGATCACTAAAAGACATTTTACTTGATTTATCTCTTATTAATTTATCCTATAGTTGAAAAGGAGTGGAAGATCATCTAATGTGAATGTGAAAATTTGGTCAGTGACCTTGTTGGAGACCTAAAATTACTTTATATTATTAATTTGAGGCTACCAGCAGATCGTTGTTCGTAAACATGTCTGCTTGCAGCTCTCAAGGATGTTTTCGGTATTCTGAATTGTTGGAACTGTAAAGATACTGTATGAGATTGCTTTTGCAATTTTTGACAAAAGAACCAGCCCATATTCTATCTATAACCTAGGTCAGCCAAAAAGATGCAGTTAAGCTTTTCTACGCCTATTGGTCCCATGTATTTTCCTTGCATTTGTTTGGATTTCTGGAACACTTGTGGACCCCATTATTTTACCTGATGTTCATGAGACCAGACGCAGTTCAAATTCGATTTTCTTGAACAATTCTCAGTATGCAAAATTTACTATTACTATTGTATAGCAAAAATTAAAAATTAAAAATTATAACTTAGAACTTAAAACAAAAATTGGAAAAAGGCAATCACATACATATGATATATTTAATTATTTTTGTTTTCTCCTGATTAAAATGTTATTTTCAGAAGTCCTAAATATAAGGTTGCTTTGCGTTATACGTTCAATTTTATTCAATGTAACTACTTCATACAAGGTAAAATCTTCATCGCTTTTAAATTTCTAAAATTTCCGGGGTCTCTACTGTGTTTCAGATAGAGTAATCTTTGATGATTCCATCATCTATGATTGAGATATGAAAACTTCTGGATAGGTATCCTAAAATTTTGAACATTTCTATATATTTCAAATAAGGATTTAGCACATAAAATTTAGTTAATTTTAGAATGCTAATAATTATTTTTCAAATAAGGATTTAGCCAATTTTAAATACTAAATATATGAGTTTTTATATTTTTCAAATAATGAAAGATCTAATAGTTAGAACTTAATTAATTTTAAAATCCTAAATACTTGGATAATGTTTAAACAACAATTATTTTATGAAGTTGTAAATGATAATGTTGTCTATTATAAAGTCTTTTAATGAAGAGAAAATAATTCAATTAACATATCTAATAGTATAGATTAGCAACTCAAAAATCACCTAAAATTTCAAAATATTCAATATATGTACCTATAAAAGCTTTAATTGAAATTACTTTTTTATCGTGAAGTTTCATAGCATGTTCCTTATCTTTTTTTTTTTTAGAAAAGGGTAACCTTGTATTCACACCAAAAGATTCATCTATCCAAAAAATGATGAATTGGAAACTTACATCCCACATAGGGTATTCCTTACAAGTTTCCTTTGAAATCAACTAATTCTATTATCTCCCCTATCAGATTTTGTTTACACCAAAAAAAAAAAAGGTTAAACAATTCATTCTAATTTTCTGTAAGTTAAGTTTTTTTGTCCATCAAAGCACTTTGAGTTCCTTCCTTTCCAAAGAGTCCACCATATGCATGCGTGGATAGTTCTCCACCAGAATTCTTTTCTTCCTCTATTGCCAATACCTTTCCACCATGGCATGTTCCTTATCTTGATAAACATATGCAGGTGGGCTGAGTGGAACGGGAAGTACCGTGATGACATCAGAAGATTTATAAAGGTGACACCAATAGGAGAGAATCTGAATTTAAATTTCATTACATTTAAGTTTGTCAGTACAAACTTTTCCATTATCTGACCAATCAAGTGCATCTGAAAGCAACAGAAAAGGGACTAAATGTTTTCCACTGATATTAGCAGGTTTAAATTTCATATATTCATGATTTTAACATAAAATGGTAGACTTCTAGTTATGAAGCTAAAATTCACTCTACTGGAAACATCATTTTTTATTTAGTCCCTGTTCATTTTTACATTGTTAAGTCGGAACTTTAGTTTCTTTGGTGTATGTATCTTTTTTCCATTTTCAACTATTGAGAACCAAACAAGATTTTACAATTATACCAATTCACGCTGTTTTGACCATCCTACTGTGCCCCCTACCATAGAAAGCAGCTGCTAAAACTACATTTGGTACAGTTACACATTAATCCTCAGGCACTTGACAAGTACATACATATTCATAATCTGGGACAATTGTGGAATTTCCAGAGATGTATATTAGAATATGAATTGGAGATTCCAGGCACTAGTAATTGATATCTTCTAATTCAAATGCATTCATCCTTTAAGTGTAATGATAGTTGGATTTGCCATTTTAGTCTTTAAAATTAAGGCTTTGTTTTTCATGTAATGCGACTCCTAATATAACTTAACTGTTTAAAGATATAAGGAGATACAAGTGTTTTATTCAGTATATTCTAACTTTGACATTACAAATTATACTTAGCATAATCATTGAATGAAACTCTTGGAATTTTGAAATTACACTAACATTTTCTATATATTATGACTCAATTCTCAGGTTTGTTTGTTTATTATATGAAGTTGTGAGAATATAGATATTATCGGATTATCTCAATAATAACAGGAGAGAGTGTGTACTTTTTTTTATTGGAACTGGTAGTGTTGTATTCCTCGGAATTAAGGTATGATGGAGACTTCCAAAAAGGTAACAACAAGCTAAAACAAGAGACTGATTATCCTGAATGATTGAACAGGGCGATGCTGGCATGAAAGGAAATTTTGCAACCCGTATCGCAGGTTCAGCAGATCTGTACAGA</genome_strand>
        <mrna_strand>CACAAATGAAGCTGATGATGAAAACCCATATACAANCTCATTCCGAGGAATAGACAACAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTATTACATGGTAGATTTAAACAACAATGCTCAGCTGCTGAATTTCGCTGGATGTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAATACTTTTAACTGCAACCATCCTACAGTCATGGAACTTATACTTGAAAGCTTAAGACACTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTCACCGCAGTATCATGTCGATGGATTTCGCTTTGATCTTGCTAGTGTTCTTTGCAGAGGGACAGATGGTACTCCCATTAATGCTCCCCCCCTTGTTACG......................................................................................................................................................................................................................................................................................................................................................GCCATTTCCAAAGATAATGTATTGTCAAGGTGCAAAATTATTGCTGAGCCATGGGATTGTGGAGGGCTATATCTTGTTGGAAAGTTTCCGAACTGGGACCG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGGCTGAGTGGAATGGGAAGTACCGCGATGACATCAGGAGATTTATAAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGATGCTGGCATGAAAGGAAATTTTGCAACCCGTATCGCAGGTTCAGCGGATCTGTACAGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E246576" ref_strand="+" ref_description="SGN-E246576 [cLEF-45-L13]">
      <seq>ataattcttccaaaagtgttcatgatggaatgattgaattagcattggatccacagaagaaccgcaccggagacatatggcacatatgcattaaggagttgccccgaggtggggtcctttatggttatcgcattgatggacctcgaaattggcatgaagggcatcgatttgacgatagcattattttgattgatccttacgcaaaactaattgaaggtcgacgagcttttggagatgaaagcaataaaatgtgtagattttttggaacttatgatttcaatagcttgccttttgactggggagaaaattacaagcttccaaatgtaccggagaaagatcttgttatatatgagatgaatgttcgtgcttttactgctgatgaaacaagtagtttggatcaagatcaacggggaagttaccttggcttaattgaaaagataccacatcttctcgagcttggtgtcaatacagtagaattattgcctgtttttgagtttgatgaactggaattacaaaggcgacctaatccgagagatcacatggtttattacatggtagatttgaacaacaatgctcagctgctgaatttctctggatgtggtaatacttttaactgcaaccatcctaccgtcatggaacttatacttgaaagcttaagacactgggtcaccgagtatcatgtcgatggatttcgctttgatcttgctagtgttctttgcagagggacagatggtactcccattaatgctccccccttggt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="57233" stop="44418"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="56929" g_stop="56851" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="17" r_stop="95" r_length="79" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="56850" i_stop="55008" i_length="1843">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="55007" g_stop="54771" g_length="237"/>
          <reference_exon_boundary r_type="cDNA" r_start="96" r_stop="332" r_length="237" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="54770" i_stop="54063" i_length="708">
            <donor d_prob="0.861" d_score="1.00"/>
            <acceptor a_prob="0.696" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="54062" g_stop="53958" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="333" r_stop="437" r_length="105" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="53957" i_stop="53659" i_length="299">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.980" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="53658" g_stop="53554" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="438" r_stop="542" r_length="105" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="53553" i_stop="47197" i_length="6357">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.971" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="47196" g_stop="47139" g_length="58"/>
          <reference_exon_boundary r_type="cDNA" r_start="543" r_stop="600" r_length="58" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="47138" i_stop="45771" i_length="1368">
            <donor d_prob="0.928" d_score="1.00"/>
            <acceptor a_prob="0.978" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="45770" g_stop="45707" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="601" r_stop="664" r_length="64" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="45706" i_stop="44814" i_length="893">
            <donor d_prob="0.957" d_score="1.00"/>
            <acceptor a_prob="0.421" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="44813" g_stop="44718" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="665" r_stop="760" r_length="96" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E246576" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>744</cumulative_length_of_scored_exons>
        <coverage percentage="0.979" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E246576" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="56929" e_stop="56851"/>
          <exon e_start="55007" e_stop="54771"/>
          <exon e_start="54062" e_stop="53958"/>
          <exon e_start="53658" e_stop="53554"/>
          <exon e_start="47196" e_stop="47139"/>
          <exon e_start="45770" e_stop="45707"/>
          <exon e_start="44813" e_stop="44718"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTTCATGATGGAATGATTGAATTAGCATTGGATCCACAGAAGAACCGCACCGGAGACATATGGCACATATGCATTAAGGTAGTAATTTAACTATTTTATGTACCTTCATTACTGTATTCACTCAGCAATCTTCAAAGATTATATGATTTGGATGCTCATCGTATCATGTTGGCTGTCCACTTTCTACTCTCTTTTTGCTATTAATTGACCTGCTCCCTATTGTAGGCAGTGTCAAATGATTGATCTCCTTCCTTAATGAATACTCAAATGTGTCCATAGTTTCAATATAAAGTAAACATATTGTGGTTTTCTGTTACATTTTTAAAAGAGAAGTTAACATATTGTAGTTAGAACTGAATGTCATCCAATTGTATGTCCAATGATTATTTGAATTTAATTTATCTTTCCTGTTATTCTGTCGAATAAAAACATTTCAAATCCTTTCTGTAGAGTCATTGAGTTGTCCTAGTAAGTCAAATGACCTCACATATTTGGTAGGGTATCTAGCAATTCTTTGACCTTGACCTCACATGTTTCCAACTTTTATTGAGAATATCCCAACTAAGTAAAACACATAAACTAATGAAACTTTCTTTCCTTAAATTTCCATGCTGGAGCTGGAAGGAAGTAGTTCACTTCAGATAGATGCATGGAATATGGATCTTGCTAATCTGAAAGGATTAAATAAAGGGATAAATTAAGATGAAAGAGAAGTAATGTAAATGTTGATTGTGTTAATTAATATGATTTTAGGAGACTTTATTTTTCCTTTCCTAGCATTATTGTAGGAACAAAATATTTTTTTTTTATTGTAAATTGATTGTCTTTCCTTAGTAAGGGTCCATTGCAAACTACCCCTTCTCTTTAAGAACCCTAATTGATTGTAGTAGACCTAGTTAGCATATTAGGGATGATCATGTTTAAGCATATTAGGGATGATCATGTGTACTAGCAGATTCAATTCAAGAACTTGGATGATTGCGATCTAGACCCCTAATTGAATAATTAAAGACAATAATAATACAAGACTAGTTACATTCTCCACTTAATCGAATAAGAACCATATATATCAAGCAAAGAGTTTAATATTACCTCTTAAAAAATCGTTCTTGTAAGGTTGTACAAGAAATCCTAAGTAACCAATACACGAAGATATGAATAAATAAAATCTCAATTTTATTGATAGCTATTCTGTGTCAAAAAGAATGAAATCAACGTGGGTGAATCTAGGGTAAATTTCTAAAACACTATCCCAAATAGCACGAGATTCAATATCTACTTTATGGAAATAATAGATAATAAAACCTAACTAGGAAACTTTAAACTAGGAAAATTGAACTAGACAATTTTTAAACCAGGAAAACATGGAAGATTAATGTCACACTAATTCTAGAACTACCTAACAAAATAAGGAAAGAAGTGTCCAATTTTCTCCTGAAAATACGCCTATTCCAACAGACTTGTGCATGTATTTCAGCCTCTTTTGGGGATCCATACATGCTATTAGGTTGGCTATATGAATCTTCACTGACCATATTTCCTCATTTATGTTTAAGCTCATGTTAATCATATACTAAAATAAATAAAAGTGAAAATAAGTCAAATTTCATTCCAATTACTTCCTTTGTATTTATTTGTTCAGATTGGACTTCTAACTCGTTCAAATGCATAATTATCTTTAAGTTTAACATTCACTAGTATCAATTTTGTAATCACAAATTTCCTTGGATGAATCAATAGTTTCCCATATTTTTGTACTGTTGGAACTGTGTAATGAAGGTATACATTTCTCTTTTCAGCAGGCCTTTCCGTGGTTTCTATTTTACTCACAGTTTATGCTGCTATGTCACTATTATATGCTATTATTGTGCTTGCTATATAACCTTTTCTTACTGTATTATTTTTTCTCCGTCATCCGCAGGAGTTGCCCCGAGGTGGGGTCCTTTATGGTTATCGCATTGATGGACCTCGAAATTGGCATGAAGGGCATCGATTTGACGATAGCATTATTTTGATTGATCCTTACGCAAAACTAATTGAAGGTCGACGAGCTTTTGGAGATGAAAGCAATAAAATGTGTAGATTTTTTGGAACTTATGATTTCAATAGCTTGCCTTTTGACTGGGGAGAAAATTACAAGCTTCCAAATGTACCGGAGGTAGATTGAGAAGAACTACTTGAATAACTTTTTTCCTCGTGTGCAAATCTAAAGATAATTTGCTTGCATGTTCAGCTATTTGACTTATGAGCTATGACTAGTGACAGAGCTGTCATTTTGTAAGTGCTCAAATTGTCTGCCATTTAGTTGATCTTGTTATTTCAAGTAAGAGGAGTTTCAGCTTAATCTTCTGTAGTAATATTATTGGTTCTTTGGTAGATTGAGCTGTAAGATTATAGTACTTAGATCTTTTATAACATTTTACTCTTAAGGATAGTTCGATTTGCATTTTACTTATGAGTGGATTATAATGTAGGGACTGCTTGTGTGGTGATTAATATGTAACAGATTGCTATGCAGTCATTAACGATCAAGGAATTGTTGTGTAGTGATTAAGAGATTATTGCCATACAAGAATAACCTTTTTTTAGTGACATTCTTGTCTTTGAATAGTCTAATCTCTGTATGGCTAATACACGTATTCTTGTTTCACATTGTATCTAGTATATAATATCACATAGATTCTCGTATAACTGAAGTTGTATTATTTGGATACCACCAACCAAATGTTGCATTACATAATGCGCGATTGTGCAACCAACCAAATGTTGTGTTATTCTATGCCCGAATATTTGCTGGATTTGTTACCACACAATCAACCAAACCAACCATTAACTCCTTGCAGTATATCCTCTTTTCTTTGGGCAGAAAGATCTTGTTATATATGAGATGAATGTTCGTGCTTTTACTGCTGATGAAACAAGTAGTTTGGATCAAGATCAACGGGGAAGTTACCTTGGCTTAATTGAAAAGGTACTTCCATATTCTACTTGTCTATTTTCTCTTTTACCAACTACTAGCATTTCATTTGTTTGTTGAAGTTTGGTGTATCTTCCTTAATAGCAGTACTGCAAGTTACACCACGAGTTAACTTCCCAAATACTTACATTTTTGTTTTGGCAAGGTCCAATTTTAAAATTGCTTTATATGTTCTTTGGCCCTTTTTCTTAGATTAGATGTCTTTGATATTTTCATCATATACTAGTCACTTGCAGTAATCTGTTAAACTTATTTTAGTCTTTCAGTTATCTGACATTCATCTACAAATGCAGATACCACATCTTCTCGAGCTTGGTGTCAATACAGTAGAATTATTGCCTGTTTTTGAGTTTGATGAACTGGAATTACAAAGGCGACCTAATCCGAGAGATCACATGGTAAACATACCTTGTCTTTGCGCTTTTTAGCTGTTTTTTGTCTGGGCTTATTCTTTTCTGGTGATTTCTCTATTCTTAAGCTAGTTTATGATGATTATTCTTTCATACTTGAATTGTTTTTGTATGTGAGCATGCATCGTTGAGTCATATTATGCTTTCTCTGATTTTCACTATTTTGACATTTTTATGGCGTAGTGTATCAGTAAAATACCAATGCTTTGAATGGTAAAGATGGAATTAACATCCCACCTTTACTCAGAAATGCCTGATCACAATAGTAACTCAGATCCTTTCAAATGTGCCCAGGAAACTCTTATAGTGATCTGATTGAAACAAGCGATCAACTTTATATATTTATTTGGGAACCAATTGTGAAAAGAAAGAGGAGATTTGAGAATGAATTGCTGTATAACTCCCTCAAGCATGTTGGAGATTATATAATGTTTACAAGTAATCCAAAAAGAAAAAGAAAATAATGCTCATTCATATTTATACAGTTATACAGATCTGCACCTTTCCTATATTAACAAGGAATGGTGCCACAACCCAAAATCTCTAGCTGCATGATATGATCCTAGTTGGGAAACTAAGGATTCCAATGCGGAAAACAACACAAAATGAGGATAGGGGAAATTGATAGATGAAATAGAAGAAAGAAAAGATTTTTCAACTATATTATGTGATTGATCAACTTAGGATTGGTTACCTACACCTATCAATCAACAATCAAAGATGAATCAATCCAAGGGGGAAGGGAAACTTGAACTCATACATGAAAATCTAATCCTAGATTATCCTAGAGGGGCTCAAAGCAAAGAGATCAGGGAATTCACCCTCTAAACTAACCTAATATCCATAAAGGAGGAACTACACTCTCAAAGGAGTTCTTAAATCTTCAATCTTCAAAATATGAAAAATGAAAACAACTAAGATAACTATTTATACTTTTGCCTTACAAGCATAGCCCAAAAGTGGCATTTGCACAAATAGCAAAAATATCCCTTCCCTATTTGAGTTGCAATGCCACTTGCGACCGCAAGTAAAGAGATGCGGTCACATTTTGTGAGCGCAAGTGATCTCACTTTGATGCGATCGCTTTGGGTAGGATGTGGCGTCACATATCTTGAAATGCGGTTGCATCCTCTTCTACATTTTCTTTTCGAGCTATCCTTCCATAACTTGAGCATCTCCACATGTGAAATTGGGATTTCACCCTCTTCCATCCAAGCTATTTTCCATAGCTTGAATGCTCCCACACATGGGTCTTGAATGGTCCTTTAGGACTCCATCTTCTTAATCAATGAGTGTATAGCTTGAAGATGTTAACTTGAGACTCCTTGAAGCACTTCAACTTTGGTGAAAGTGTTCCGTGGGCCAAAATTGGCTTGATTTCATGCTTCATCATGTATCCTAATCACCATTAAGCTTCTTGTGCTTTCCAAGGTTGTATCATCCTTTCCTTATTGAAAAGGATTCTTCCTAAAATCCAGATTTAGCAAAACCATAAGGAAGACAAACAACAACAAAGTCCTCAAGGCATAAGGGTTAGTGTTAGTGTTAACAATCCTACTACCAACATGTCAAGCATGCACAAACTTGTTATATCATCTAGCATCAACCATTCTTATCAAGAACAAATTTTCAAATAAAGCACAAGGTACTTTATTATTTAAGAGACCTTGACCAAAGGGTAAATCAAGAGAGCCAATACATTTAGGAATCCAAGCATGCAAGTTCTTGTTGGTTCTATTGGCCAATAAGCATATTTATCCCCTTTAAGTCAAGAAACAAGTTATAAAACCAATGGCGAAGGGCAACGTCATAAACAAGGCCAACGTTAAGATTCTACCTAATGTACTAGCCCATCTAAAACTTTGAATCACTACCAAGTTATCACCGGGTCAAATACAAAGGTATTATTCCCCACAAATGGGCAAATATGGCTATATGCCCATAATAGGTAAAGTAATAACATCAACAAGAATCACATTACTAAAAGAAAAGTGTTAATACCATTCTCATCACACAAAGATGTTACATCCATGGCTTTACAAAACCCAAGAATAAGCATGAACCACATATACATACCTACCTTGAAGGAAACACAAAAAGTGGCTTCACACACAATTGTTTTTCCATTATGTTTCTTTAATGGCCATCTTTCTTAAGTTTCCTCCTTGGATAAGACTTCACAAACAAGTCAATTAAATAGTTAAGTTCATCAAAAGAGAGTTTTACCTTCTCTAACACGACTTTGGTCTATCAAGTGGATTATAAAACCTCAAGGACTTGGTCATGGGGAAGGGTGCCAACAACTTCACCCCCGTCTCGCTTGTCTTTATGACCAAGCATCACCTCACAATTAAGGGATCCATGATCCCTCAAGAAGAAAGTTCCTCCACTAGGAATGTGTCATCATCACATAGTGATTTACCAAATACCTTGTAGCCTCTAGAAGTGTCTACATCTAAACATCACACTCATACAACTGTGATAAGTTGATCATAGTCATGTCATCATCAAATAAGATTGTCTTTTTATATGACCTTGAGCAATTCTCTTCTTATGAGCTAGCTTTTAGGCTTAAAATTTATTTATTTACCGAGATGTCTACTTGATATGGAAGGAATTCTGTTAATTCTCCTTTAGGTTAAAAAAATCCTTACTAACTTGCATGCAAATTCGAGTAACATGAATATTTTTGGGTCGTTGATCTTACAGAGAATAGATAACTTCATGGTGTCTCCATGTTTATTACTATGTCTATTACTATAATTACACTTAAATTGAGTTCTTCCAAACTGACCTTTTTCTCAGCGATTCTTTATAGACCAGGACGTTCAATTTTCCGTTATTTGAGATGTGAGAAAAAAAGTGTCAACAATTGGTGAGGAATCCAGTCCGTGACTAGGTTGGCCAGCTTGGCGAAATGGTCGAGAAAATAGTCCATCAACTGTAGAACCTTACGACGAGCCAAAATTTGGTCACACACCGATCAAGGTCATTAGGAAGTTTAGCAAGTGTGCGATCTAGAAATATCGTCAGTGATTGCCCATGTTGCTTCAACACTAGTATTATTTGACATCAATTTCTATAATTCCTTTGTGATTGCCTGTACCCGTCTCAAGTAAGTAGAAATACCCAATTCCTCTTTCTTTAAGTTTATCATTTGAGATATACCATATTATAAAAATGAGAATATGCCATTAGTGTATTAAGAGCAAGCCTTTCTCAAACAAAATAACATGTCTGAAATGGATGAAACAAAGACCTTAATTTGGAATTTGAGTAAGTTGCCATATGAGACTAAATAGTTGAGCATCAACTTTTTCCCACTGTGCGTGGCCCTTTTCACCCCCCTCACTAGATTTTTGTTAAGTGATCTTTAGTGCCTTGACCCTTGCACCACAACTCAACTGAGCTAGCCAAATTTAAATGGTTTCAACTTTTAAATATGGGTGTAGAAGTAATTGTAGGACTTGAATTTTCATTTCCCGCACCCAAGGGTGTGACCTAGTAATCAATGAGGTAGGTTGAGTACCATGAGGTTTCTGGTTCAAATCCCAGTGGAGACAAAAAAACACTAGGTTATTTTCTCCAATCGGTCCAAGCCTTGGTGGACATGGTAAGTACCTGTTGCTGGTGGGGATGGCAAGTATCTTATGAAATTAGTTGAGGTGCGCGCAAGCTGGCCCGGACACAAAAATTATGAAATAACAAAAAAATTCCGATTCCCCATAAGTATCAAAATCCAAATGACATAATACTCCACAAAATATAATGGATAAGGTGACAAAAAGTGCAAAAGAAGATGTGAGAATAAAATGAGGAGATGTCACAGCTACAACCAAGGTACACAACACAAATTAAAATAGTGGGAAACACTGTTGAAATGAAGTGGACTGAAGAGTATTTTCTTTAGATTCTTCTTTTTCTTCTTTCCATCTACTTTGTTCTATCTAGTGGTATTATTACTTTTTTTTTTTTGAGCAAGGTAAAGTTATATTCCTCAGCAATGTAGGTATGCTGTCAACCATCAAAAACATTACAGTGCAAGTAATCATAATTACAGATAGTCTAAGAAGTCTACTGTCTGTTCTACCTCATCTATACCCTCTTCTTTACACCAAAGATATAAAGTATTAATGCAGTTTTCTTTTACTTTCTGCATTGGATTAGTAATATTTTCAAAACATCTATTGTTTCTTTCCTTCCAGGCTGACCACCATATGCAAGAAAGGACTAGGCTTCACCATTTTTTCTGTTTTTTACTCCCACCTCTTCTCATCCAGCAGGTTAGAAGATCTGCCGTATGCTCAGGCATCAACCATGGTTTTTAAATGTGATTAAGAAACATGTGCCACAGCTGAGAAGTCACTCTACAATGGAGGAACAAATGGCTATTTGTTTCCTCCTTTTCCTTGCAAAAGAACCACCTTGCGACAATCTCAAAACCTCTCTTTTTCAGTTTCTCCTGAGTGAGACAGCTCTTCTACAAACCTTCCACGTGAAACCCTTAATCTTGGTAGGGATATTAGATTTCCAAGGTCCAGGGATGTTCCCAGGTTGTGAGATCAAAATTTCTTCTGTACAATCTTCCGACTGAAAATTTTCCATCCCTATCATGTCTCCATCTGATTATCAAGGCTGGTATTTAAACCAGAGAAATCATTCAACCTTTGCAGTAGGCTGGCCACACTCTCAATCTCCTAGTCATTTAGAAGCCTCCTAAAGATGATATTCCATCCTTGGTTAGTCCAGGTCTCAGCAATGGATGCTTCAGGAGTGCCACAGAAAGAAAATAAATCTGGAAAATTGTATTATTACTATCTTTCTGTTAATTAAATTCTTCGAGTAGGGTAGAAGGTTTGAATTTTGGCTCTTTTTTTGGAGGGATTAGGCTTGGTGGGAGTCTAGAAGCACCGCGTATGCCACAGTATTAGCTTTATGCATGTAATTTCTTGCATATGATATCTGTTACCATCTGTTGTCTTTTGTGTTTCAGTTATCGCATTATTTCCTTGCTATTACTATTCTTTTTCTGGATGCCCTATCCTGCTTGCGTATTAATTGACCATTTTTTCCACTGTCATATTTCCTTTTTCATAACTACTTCTACCTCCACGAGGTAGGGGTAAGGTCTGCGCAAACTCTACCCTCCTCAGACCCCACTTGTTCAATTACATTGTATGTGTTGTTGTATCTGCTGAAACTTGATGAAAAGATGCTTTGTGTGTGTGTCTGTTTGTATATGTATTTTTGATTTTCATGTATTGAAAATCTTTATTGACTACAATGTCAATTTAAGTGTCAGAATGCCCTTGGTTTGACTAAATCCTTTTTGGACTCGTGTTAACTTTAGATCAATACATGGGGCTACTCAACAATAAACTTTTTTGCTCCAATGAGTCGATATGCAAGTTGTGGTGGCGGACCTGTCCGTGCTTCCTGGGAGTTAAAAGAAATGGTCAAGGCCTTGCATGGTGCTGGAATTGAGGTTTTCCTTATATCAGTGTGGTCCTTAAAGAGCTTGCTATACATGTCCAATATGTCTCTTCTACCTTTTCAACCATCTTTCTGAAGATGTTAGTTTCTCTTTTTCACGGTTTTTCATTCTACAGGTCATCTTAGATGTTGTTTATAATCACACAAATGAAGCTGATGATGAAAACCCATATACAACCTCATTCCGAGGAATAGACAACAAGGTAAAGGAACTGTTCAACATAATAGTCAGTATTTGGAAAGTTATGAATTAGATCTTTATTGCACACAATGTACCTTGGTAGGTTACTTTGTCTAGGGAAACATCTACATTTTCTGGTAGCAGGTTCTGGGGGTGGGGTGGGGTATTGTGTTCGTTAACAGATAACCATTTTAGTAATCAACATCATCTTTGAACTAAGTCTTGATTGATGCATCCACCCGCCACAAGAAAAGTTGTTTGCGTAACTTTACGGAGCTGCTCAACTGGAGTGGCCTCTGATTATGGAATTTGGCAGTGTTTTTACTTTCTGTTCTGCAGATTATTATGGAGTGCATAATCTACTATCATATGTAGTTAAAATGCTAGAACTTGCTTCTTTTCCCCATTCCTCTGCTATAAATCTTCTCTGTAAATCTGCATCAGACCGATAGTTTAGATGAATTTAACTCAATTCTTTTTTTTTTCTCTATAATGCTTTGTCTCCCTCAAAAACCAGATGAGACCAGGCTTACTTTGTCAAGTTCTAAATCAAACTATTCATATCTGATGTTGTGGATGCAGTCTGAATTTCTGTTATTCTATACAAAAGATTTGTCTCTCTGTTTCCCCACCCTCTCATAAATGATATTTCCTTGCCCTCTCAATGGCAGGTTTATTACATGGTAGATTTGAACAACAATGCTCAGCTGCTGAATTTCTCTGGATGTGGTAATTTAACAATACACTTTTTTACCATTGAATAAAAGGAAAATCTGCAAAGGCAGTTCTGAACACATCTTTAAAATACTCTCCAGGATATTTCAATGGTTATTTGAAATTGTTAACCTGAGGCAGTTTCCTAAGGAGCAATTTTGGCAATGTTATAGGCGAATGATTTACTCAACTAGATTTTTACAAATATCACTCCACAAAAAATATATGTACGGAACGGTACAAAATATACAATAAGGGCCCGAAAGTGACCAAAAAAGACAAATATATACAACGAACCAAACCTCGAACCAAACCTCGGACCTGGTGTCACCGATATAAGAGCATCTAAAGTACAATAATAGGACTACAATCTGTCAAACAAAATACAAAATATATGGACCTACAAAAGAGAGAGAACAACAAGTCCCGAATGCCTAGAGCTCACCACGATCTAAGCAGCGACGGCCTCGTGAGATCAGGAATCAGCGAGGGTGGCTCGTAATAAGCATTGCATCAGAAAAAGATACAGAAGTGTAGTATGAGTACCAAAACACTTCTTACATTCACTTAGAGTGACTTCACTTCACGTCTTACAATGTGAGAACAAATTGGATTTGCTTCAGTACACTTATTACATTCACTAAGAGTGAGTTCACTACCATTAGAACCTCATTATCCCTTGCTATATTATATTTGCACCATCTTTGATCTTCACCCACATCAGTATTTCTTGCCCTGGTATTGCTCCTTGACAGAATAAAACATGTTCTCAGGAAGATCCTTGCTTTCTTTCACCATTCTTGTTGTCTACCCGTCTCAACTAGGTTTATTTTGTTTAACCCTTCTCAAATTAAATCAGGGTGAATCTAAAATTTAGCTCAATTTAACACTATTTAAGTTTAAAGAGTATTTGATTTTTAATATAATGGTTAGAAAGAATTTGTTCATCATTCCAAATGGATTCTTTACAGATTGGTTATTATTCACTTACTTCAACTGGTAATAATAATTGGAAATGTAATGAGGCAGTTATTTACTTATTTTTATGATGTTCCAGAAAGGATGTTGTCGCTTGATTATAAATTGACATATCCTGAAATATTTTCACATGGGAGTGAGGCCCAATTCTTTATTGCAGAAGGAATGTTATGGAGTTGAACCATGGAGGAAAAAGGGGAAAAGGTCTAATTACTAATGTTTATTTTACTCCATACTTGTCAGTTCTTAGTCCATGCAGTCATGGAACTTCAAGATTTATAATTGTGTTTGACGTTTTAATGCATACTCTTGCATATTTGCTTTTTCTTTCTTTTGCTTAAAAAGTTGTTATCTTCATTTAGTCTTTGGTAAGAATTCTGAGATGCAATTCTTTGGTCTTTCCAGGTAATACTTTTAACTGCAACCATCCTACCGTCATGGAACTTATACTTGAAAGCTTAAGACACTGGTACTCACTGATTGATATCAATATACTGTTATTTTAGTCAAAATTAAACTAAAGATTTTCTTAATGGATGCGGTTATTTTTTTTATGGCAAGGGTACCTGTTTTTGTGGATGTGGTTGTTGTTTTCATTTGTTTGCACAACACCAAAAAAAAAAAAACTTGCAAATTTCATTATTCTCCGTACTTGTTCAATGTCCATAAAGTGTGTCACAGGCACCTTTACTCTCCAATTTGTCTTATTCCCCTCTAGGGTCTTTTAGTGATAGCCTGATAGGCTCCACGGGTATTGGACAATCCCGTTTGAAATACTTAGTGGCTAGTGTATTATAATCAATAAGTTCTCTTTTTCTTTTCTGTTGCTGAAAAAAAGTAAATAGATAGACATATTTCTATAATTAGTTTGTTTCTCTTCTATCCCATATATCTATTTTAAATTATGTAATAATACATTTCTGATCTGGAAGCCTAGCTGGGGCAAGAATCTCAATATGTTATGACATAGCCTTGAGCCCTTAACCGACCTTTTACTCGGTCACATACACACAATGGTCTATGCAGACTTGCTGGTTGGTCAGTTGATGAGGATATATACTTCATCTTTGAATGCTTATAGTTTTCTTGAAATGCTGATATGTTCATAAAATTCACTATGTCGGCTTGCTCCTAGTGGATTTGATCGTCAACTGGATTAGTTTTTCCAGTCTTATTATCCCTCTCTTTTCGTCCTCTATTTCAATGGTCTTTTCATATGCTTGTTAATAGATGCGGTGCAGATACCTAACTGAAATTATTACTGGCAGAGTGATTTATCCTGGATGACTTGTTTGTTTCTTGACTAACTTTTTTTCATCTCCATTTGGTATCCTCTTCTACTTTTTGTTGGAGCAAATAAAGGGTCACCGAGTATCATGTCGATGGATTTCGCTTTGATCTTGCTAGTGTTCTTTGCAGAGGGACAGATGGTACTCCCATTAATGCTCCCCCCTTGGT</genome_strand>
        <mrna_strand>TGTTCATGATGGAATGATTGAATTAGCATTGGATCCACAGAAGAACCGCACCGGAGACATATGGCACATATGCATTAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTTGCCCCGAGGTGGGGTCCTTTATGGTTATCGCATTGATGGACCTCGAAATTGGCATGAAGGGCATCGATTTGACGATAGCATTATTTTGATTGATCCTTACGCAAAACTAATTGAAGGTCGACGAGCTTTTGGAGATGAAAGCAATAAAATGTGTAGATTTTTTGGAACTTATGATTTCAATAGCTTGCCTTTTGACTGGGGAGAAAATTACAAGCTTCCAAATGTACCGGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGATCTTGTTATATATGAGATGAATGTTCGTGCTTTTACTGCTGATGAAACAAGTAGTTTGGATCAAGATCAACGGGGAAGTTACCTTGGCTTAATTGAAAAG...........................................................................................................................................................................................................................................................................................................ATACCACATCTTCTCGAGCTTGGTGTCAATACAGTAGAATTATTGCCTGTTTTTGAGTTTGATGAACTGGAATTACAAAGGCGACCTAATCCGAGAGATCACATG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTATTACATGGTAGATTTGAACAACAATGCTCAGCTGCTGAATTTCTCTGGATGTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAATACTTTTAACTGCAACCATCCTACCGTCATGGAACTTATACTTGAAAGCTTAAGACACTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTCACCGAGTATCATGTCGATGGATTTCGCTTTGATCTTGCTAGTGTTCTTTGCAGAGGGACAGATGGTACTCCCATTAATGCTCCCCCCTTGGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E391659" ref_strand="+" ref_description="SGN-E391659 [TUS-24-M21]">
      <seq>cataattcttccaaagagtgttcatgatggaatgattgaattagcattggatccacagaagaaccgcaccggagacatatggcacatatgcattaaggagttgccccgaggtggggtcctttatggttatcgcattgatggacctcgaaattggcatgaagggcatcgatttgacgatagcattattttgattgatccttacgcaaaactaattgaaggtcgacgagcttttggagatgaaagcaataaaatgtgtagattttttggaacttatgatttcaatagcttgccttttgactggggagaaaattacaagcttccaaatgtaccggagaaagatcttgttatatatgagatgaatgttcgtgcttttactgctgatgaaacaagtagtttggatcaagatcagggggggggggggcttggcttaattgaaaagataccacatcttctcgagcttggtgtcaatacagtagaattattgcctgtttttgactttgatgaactggaattacaaaggcgaccta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="58681" stop="53271"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="58381" g_stop="58364" g_length="18"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="18" r_length="18" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="58363" i_stop="56930" i_length="1434">
            <donor d_prob="0.954" d_score="0.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="56929" g_stop="56851" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="19" r_stop="97" r_length="79" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="56850" i_stop="55008" i_length="1843">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="55007" g_stop="54771" g_length="237"/>
          <reference_exon_boundary r_type="cDNA" r_start="98" r_stop="334" r_length="237" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="54770" i_stop="54063" i_length="708">
            <donor d_prob="0.861" d_score="1.00"/>
            <acceptor a_prob="0.696" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="54062" g_stop="53958" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="335" r_stop="439" r_length="105" r_score="0.924"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="53957" i_stop="53659" i_length="299">
            <donor d_prob="1.000" d_score="0.84"/>
            <acceptor a_prob="0.980" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="53658" g_stop="53571" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="440" r_stop="527" r_length="88" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E391659" ref_strand="+">
        <total_alignment_score>0.982</total_alignment_score>
        <cumulative_length_of_scored_exons>527</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E391659" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="58381" e_stop="58364"/>
          <exon e_start="56929" e_stop="56851"/>
          <exon e_start="55007" e_stop="54771"/>
          <exon e_start="54062" e_stop="53958"/>
          <exon e_start="53658" e_stop="53571"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATAATTCTTCCAAAGAGGTTAGACTCACGCTTTTGGATGGTATATTTTGTTGTCTTTAATTCTGGTCTTAGTTGCAAATTCTAGATATTAAATTCTACTACTGTTAATCCTGCCTATTAAATTTGTTAATGTTGAGATATTATTTGATTTGCAAAATCAGAGTGATTTGATATTACTAGGATTGGTTTTGTAAATATACACCAACCAAAAATGTATACAAGGTGTAATAGTAGTAATCCCATCCAAGCTTAAGGGAACAATCAAGCTTTCCGTTTCTTCTCATTCTTTTCCCAATGTTCAATGGTATTAGACTCAGAGGAATTCTCATATGATCTTTCCTTTCCTTCTTATCCTCCAAATCCTCTGGATGGAAAAGATAAACTTCCGTTCTGCCCAATTTAATCTGGAGGTGTAGGAGTAAGTTGAGCGTCACCTCCTATACAAGAAGTGTGACAGGGCTCGAGTGACCTTAGACCGTGAAGCTCATCACCAACAGCTTTCTTGTCCCCGTCAATGCATCGATTTGCCTCACCAGAGCTTAATCCATGTGCAGATGCGGGAGACAGAATTCTGGCATCTCTTCTGACTGAGCTCACCTGACAGCGAGCCATATCCAGTGGTCTCCTTTTCCGATTCATCACTTGTGACTCCAAATCACCTCAAGGATCTCTGGGAAATACCCGAGGGTCTTTCCGAAGCAACCTCTCTACCTCCACAAGGTAGTGGTAAAGTCTGGATACATTCTACTCTCTTTAGACCTTCACTTGTGGAATTTCAGTGGGTATGTTGTTGTAATATGAATAATTCTAACCTAACATAGATTGGATTATGGAAAGCCAGTGGGTTAGGTTGTTTTCCATGCATACTGGGAGATAAATAGGAGAGGTTGAAGAGAGGGGTATGGGATGCCTTACATTATCTATTCCAATATATTTGAAACGGGAAGGACAACATATGCCCTTCTTAATTCCCCCCCTGTAATTATATCAACAAGGAGGTGGGTGGGATGCCAAATGTAAGTAAAAGCTTTCTGAACAGCATAGGAACGTTTCATCTTAAATTCAACTTGTAGGTATCGTCACATCCCTTCATCTATTGCAACATTTCATCTAAGATGGAGAAAATCTAGAAACTATGTTAATGAAATGGTGTTAAACATTCTGGTGAACCCAGCATAACCTTTTCTGCAGTAATTGACGTTGTATCACCTTGAGATACCATTATAAATTTAGTATGTAGTAAATGTTCAAAAGATTTGTTACACTTAGGATGAAGTACCATATATTTACAAAGACTTTGGAGTATTGAACAGTTTAAAACTACCTGTTCATTCTTCTTGCCAGGGAATAGTACTATCCCTGGTGAGCTCATGCTCATTTTTCTCATATATCATATGCACATCTGCGTAAAGCATGTTGAGTGAATATATGTTACATGGGAATGCTTGACAGTGTTCATGATGGAATGATTGAATTAGCATTGGATCCACAGAAGAACCGCACCGGAGACATATGGCACATATGCATTAAGGTAGTAATTTAACTATTTTATGTACCTTCATTACTGTATTCACTCAGCAATCTTCAAAGATTATATGATTTGGATGCTCATCGTATCATGTTGGCTGTCCACTTTCTACTCTCTTTTTGCTATTAATTGACCTGCTCCCTATTGTAGGCAGTGTCAAATGATTGATCTCCTTCCTTAATGAATACTCAAATGTGTCCATAGTTTCAATATAAAGTAAACATATTGTGGTTTTCTGTTACATTTTTAAAAGAGAAGTTAACATATTGTAGTTAGAACTGAATGTCATCCAATTGTATGTCCAATGATTATTTGAATTTAATTTATCTTTCCTGTTATTCTGTCGAATAAAAACATTTCAAATCCTTTCTGTAGAGTCATTGAGTTGTCCTAGTAAGTCAAATGACCTCACATATTTGGTAGGGTATCTAGCAATTCTTTGACCTTGACCTCACATGTTTCCAACTTTTATTGAGAATATCCCAACTAAGTAAAACACATAAACTAATGAAACTTTCTTTCCTTAAATTTCCATGCTGGAGCTGGAAGGAAGTAGTTCACTTCAGATAGATGCATGGAATATGGATCTTGCTAATCTGAAAGGATTAAATAAAGGGATAAATTAAGATGAAAGAGAAGTAATGTAAATGTTGATTGTGTTAATTAATATGATTTTAGGAGACTTTATTTTTCCTTTCCTAGCATTATTGTAGGAACAAAATATTTTTTTTTTATTGTAAATTGATTGTCTTTCCTTAGTAAGGGTCCATTGCAAACTACCCCTTCTCTTTAAGAACCCTAATTGATTGTAGTAGACCTAGTTAGCATATTAGGGATGATCATGTTTAAGCATATTAGGGATGATCATGTGTACTAGCAGATTCAATTCAAGAACTTGGATGATTGCGATCTAGACCCCTAATTGAATAATTAAAGACAATAATAATACAAGACTAGTTACATTCTCCACTTAATCGAATAAGAACCATATATATCAAGCAAAGAGTTTAATATTACCTCTTAAAAAATCGTTCTTGTAAGGTTGTACAAGAAATCCTAAGTAACCAATACACGAAGATATGAATAAATAAAATCTCAATTTTATTGATAGCTATTCTGTGTCAAAAAGAATGAAATCAACGTGGGTGAATCTAGGGTAAATTTCTAAAACACTATCCCAAATAGCACGAGATTCAATATCTACTTTATGGAAATAATAGATAATAAAACCTAACTAGGAAACTTTAAACTAGGAAAATTGAACTAGACAATTTTTAAACCAGGAAAACATGGAAGATTAATGTCACACTAATTCTAGAACTACCTAACAAAATAAGGAAAGAAGTGTCCAATTTTCTCCTGAAAATACGCCTATTCCAACAGACTTGTGCATGTATTTCAGCCTCTTTTGGGGATCCATACATGCTATTAGGTTGGCTATATGAATCTTCACTGACCATATTTCCTCATTTATGTTTAAGCTCATGTTAATCATATACTAAAATAAATAAAAGTGAAAATAAGTCAAATTTCATTCCAATTACTTCCTTTGTATTTATTTGTTCAGATTGGACTTCTAACTCGTTCAAATGCATAATTATCTTTAAGTTTAACATTCACTAGTATCAATTTTGTAATCACAAATTTCCTTGGATGAATCAATAGTTTCCCATATTTTTGTACTGTTGGAACTGTGTAATGAAGGTATACATTTCTCTTTTCAGCAGGCCTTTCCGTGGTTTCTATTTTACTCACAGTTTATGCTGCTATGTCACTATTATATGCTATTATTGTGCTTGCTATATAACCTTTTCTTACTGTATTATTTTTTCTCCGTCATCCGCAGGAGTTGCCCCGAGGTGGGGTCCTTTATGGTTATCGCATTGATGGACCTCGAAATTGGCATGAAGGGCATCGATTTGACGATAGCATTATTTTGATTGATCCTTACGCAAAACTAATTGAAGGTCGACGAGCTTTTGGAGATGAAAGCAATAAAATGTGTAGATTTTTTGGAACTTATGATTTCAATAGCTTGCCTTTTGACTGGGGAGAAAATTACAAGCTTCCAAATGTACCGGAGGTAGATTGAGAAGAACTACTTGAATAACTTTTTTCCTCGTGTGCAAATCTAAAGATAATTTGCTTGCATGTTCAGCTATTTGACTTATGAGCTATGACTAGTGACAGAGCTGTCATTTTGTAAGTGCTCAAATTGTCTGCCATTTAGTTGATCTTGTTATTTCAAGTAAGAGGAGTTTCAGCTTAATCTTCTGTAGTAATATTATTGGTTCTTTGGTAGATTGAGCTGTAAGATTATAGTACTTAGATCTTTTATAACATTTTACTCTTAAGGATAGTTCGATTTGCATTTTACTTATGAGTGGATTATAATGTAGGGACTGCTTGTGTGGTGATTAATATGTAACAGATTGCTATGCAGTCATTAACGATCAAGGAATTGTTGTGTAGTGATTAAGAGATTATTGCCATACAAGAATAACCTTTTTTTAGTGACATTCTTGTCTTTGAATAGTCTAATCTCTGTATGGCTAATACACGTATTCTTGTTTCACATTGTATCTAGTATATAATATCACATAGATTCTCGTATAACTGAAGTTGTATTATTTGGATACCACCAACCAAATGTTGCATTACATAATGCGCGATTGTGCAACCAACCAAATGTTGTGTTATTCTATGCCCGAATATTTGCTGGATTTGTTACCACACAATCAACCAAACCAACCATTAACTCCTTGCAGTATATCCTCTTTTCTTTGGGCAGAAAGATCTTGTTATATATGAGATGAATGTTCGTGCTTTTACTGCTGATGAAACAAGTAGTTTGGATCAAGATCAACGGGGAAGTTACCTTGGCTTAATTGAAAAGGTACTTCCATATTCTACTTGTCTATTTTCTCTTTTACCAACTACTAGCATTTCATTTGTTTGTTGAAGTTTGGTGTATCTTCCTTAATAGCAGTACTGCAAGTTACACCACGAGTTAACTTCCCAAATACTTACATTTTTGTTTTGGCAAGGTCCAATTTTAAAATTGCTTTATATGTTCTTTGGCCCTTTTTCTTAGATTAGATGTCTTTGATATTTTCATCATATACTAGTCACTTGCAGTAATCTGTTAAACTTATTTTAGTCTTTCAGTTATCTGACATTCATCTACAAATGCAGATACCACATCTTCTCGAGCTTGGTGTCAATACAGTAGAATTATTGCCTGTTTTTGAGTTTGATGAACTGGAATTACAAAGGCGACCTA</genome_strand>
        <mrna_strand>CATAATTCTTCCAAAGAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTCATGATGGAATGATTGAATTAGCATTGGATCCACAGAAGAACCGCACCGGAGACATATGGCACATATGCATTAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTTGCCCCGAGGTGGGGTCCTTTATGGTTATCGCATTGATGGACCTCGAAATTGGCATGAAGGGCATCGATTTGACGATAGCATTATTTTGATTGATCCTTACGCAAAACTAATTGAAGGTCGACGAGCTTTTGGAGATGAAAGCAATAAAATGTGTAGATTTTTTGGAACTTATGATTTCAATAGCTTGCCTTTTGACTGGGGAGAAAATTACAAGCTTCCAAATGTACCGGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGATCTTGTTATATATGAGATGAATGTTCGTGCTTTTACTGCTGATGAAACAAGTAGTTTGGATCAAGATCAGGGGGGGGGGGGGCTTGGCTTAATTGAAAAG...........................................................................................................................................................................................................................................................................................................ATACCACATCTTCTCGAGCTTGGTGTCAATACAGTAGAATTATTGCCTGTTTTTGACTTTGATGAACTGGAATTACAAAGGCGACCTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E423584" ref_strand="+" ref_description="SGN-E423584 [STM-42-A24]">
      <seq>cacagattctcttctccaaaatagggcccgatgattagaggaccaccacaaatcgtccagaaatgtccaaccggcattgtaacagttaaccggaccaatatagttccacgaacgcaccgtcacgctcttcaagatctccggcagcttcgccggcgtgatagtctcaggctcttctcctctgaccaacggattctgaagttttgtacatcggaggaggcgttccaacctaggttggtcgcagcagctaaacttcaggaagaagctcctcaaatgctggacgcttgcccttcattcaaagtttcccctggtctggctcatccactaggagtatcagaaactgaaagtggaataaattttgcaattttttctcagcatgcttctgcagttacactttgcataattcttccaaagagtgttcatgatggaatgattgaattagcattggatccacagaagaaccgcacaggagacatatggcacatatgcattaaggagttgccccaagggggtgtcctttatggttatcgcattgatggacctcgaaattggcatgaagggcatcgatttgacgatagcattattttggttgatccttacgcaaaactaattgaaggtcgacgagtttttggagatgaaagcaataaaatgtgtagattttttggaacttatgatttcaatagcttgccttttgactggggagaaaattacnagcttccaaatatacccgagaaagatcttgttatatatgagatgaatggtcgtgcttttactgctgatga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="60658" stop="53713"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="60360" g_stop="60115" g_length="246"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="255" r_length="255" r_score="0.866"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="60114" i_stop="58522" i_length="1593">
            <donor d_prob="0.957" d_score="0.92"/>
            <acceptor a_prob="0.965" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="58521" g_stop="58364" g_length="158"/>
          <reference_exon_boundary r_type="cDNA" r_start="256" r_stop="413" r_length="158" r_score="0.956"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="58363" i_stop="56930" i_length="1434">
            <donor d_prob="0.954" d_score="0.98"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="56929" g_stop="56851" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="414" r_stop="492" r_length="79" r_score="0.987"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="56850" i_stop="55008" i_length="1843">
            <donor d_prob="0.997" d_score="0.98"/>
            <acceptor a_prob="0.993" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="55007" g_stop="54771" g_length="237"/>
          <reference_exon_boundary r_type="cDNA" r_start="493" r_stop="729" r_length="237" r_score="0.966"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="54770" i_stop="54063" i_length="708">
            <donor d_prob="0.861" d_score="0.94"/>
            <acceptor a_prob="0.696" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="54062" g_stop="54013" g_length="50"/>
          <reference_exon_boundary r_type="cDNA" r_start="730" r_stop="779" r_length="50" r_score="0.980"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E423584" ref_strand="+">
        <total_alignment_score>0.935</total_alignment_score>
        <cumulative_length_of_scored_exons>770</cumulative_length_of_scored_exons>
        <coverage percentage="0.988" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E423584" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="60360" e_stop="60115"/>
          <exon e_start="58521" e_stop="58364"/>
          <exon e_start="56929" e_stop="56851"/>
          <exon e_start="55007" e_stop="54771"/>
          <exon e_start="54062" e_stop="54013"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAACGATTCTCTTCTCCAAAATAGGGCCCGATGATAAGAGGACCACCACAAATCGTCCAGAAATGTACCACCGGCATTGTAACTGTTAACCGGACCAATATAGTTCAACGAACTCACCGTCA-------C--GATCTCCGGCAGCTTAGCCGGCGTGATAGTCTAAGGCTCTTCTCCTCTGACCACCGGATTCTGAAGTTTTGTACATCGGAGGAGGCGCTCCTACCTAGGTTGGTGGCAGCAGCTAAGCTTCAGGTACGAAATTCTCTTTCACGTGTAGTAACCCAACTCTGGCGAGTTCAGTCAGTTCTTTTTTCAAATCTTACTTAGACAAAGCAGTATAATCTGTGCTGATATCATGTAAATACAGAGCCAATGGATCAATTTCCTTGTAGTTATTATTCGAAGATCCCTCAATATCTCTACCTTTGATTATGCTATGAATACTATGGGTATATGAATGGACTGTACATTTTGTAAACAAGTACAAGAATATTAACACTTAATTTTTTGTCGAGGACTGCGTTTATAATGAGGTTGATACTTTTTATAAGCCTTGATCGGAGCCTGGTATAGGATTGATAATTTTCCTTCTAATATAAAAAGTATGAGTAGAAGGGCTCATTCCAGAAGTTTTTCCTTGAGGTGAAAGGGGAAGGGGCAATGGTACTTATGCAGAGTCGGGTTAAATGAGTTCTGCGGATAAGTGATTCGGTGCAAGCTCCTGCTGATGACATTGATGTAGAAAATCCATCTAGAATTGATTGAGCTAAGTGTTGAATCATAAGTAGGAGGGATAGCGCTTCCTTTTCTCTTTATATGTTCTTTCACTACTTATGCCTTATAGCGAGAAAAATAAGCTTCTTCCAGCTTCTGTCATGACTTCCCTTCCACTTTCCTGAACTCTTGCAGGACTTGATTTGCGGGAGATGAGGTTTAACTCCTATAGCTTTCCTTCTAACCATGCACACAAAAATGCCACATGTTTGATGTTTGAGTAGGGTCACTAAGGTCTATGTCAGTGCTTTGTTTAAGTGAGTGGTATGAGCACCTACTTTAACATTTCATATTCTAACTAATAAGACTTGGAACTTAATCTTTATCAGAAAAGTACACTTAACAGCAGTTCCCAGTACTTGTTACTAACTGAAATCAGAATTCTACCTAGACATATTATGTAAATGATCTTTTTTGTGATATTTACTTTTCCTGATAGCATCAAGAGTGTTATGTAGGAAGTGATGATGGACCAATTGGTCTAGAGAGCTGTCATCTCCTTTTTATAAGGACATGACCAATCCATCCCTCAAGTATATGGTGAAGGATTTGTTCTCTCATTTTCTCATTGCTATATCTTCTTCTTTCTTAGAAGTTACAACCTGAGACTAGATTAATGACCACCTCTCTACCTCCCCCTTAGGATTTATGCTGCTATCTGGCGACCTACCGAAACAGATGATCCTTCTTCCTCTTCCCCTCTCCCCAACCTCCCCAATTATGGCTTTTACCCTGATTTATTGTACACTTGGTAATTATTTCCCTGGTTTATCATATAATTTTGTCATTTTGTGTGGTTCAATTCTGATAGATTTACGTCTTGCATGTAAAGTTACTATGGTCATTTATCCACTGCATAATAAATCGGGTCAAATATCAGAATATAGAATGTCTCACCTATGATCTTATACAATACAAATGAGATATCCTAACTAATCCTAATTTTGTAAACCAAACGATGGCCAATTTTGCTTTCTTGGCTGACCTTTATTTTTAAAAGTGGACAAGATTACTACTGTCCTATGGGAAGCCTAAACTATTTGATTTCTTTATTTGTGCTCATGCTTTTAGGAAGAAGCTCCTCAAATGCTGGACACTTTACCTTCATTCGAAGTTTCCCCTGGTCTGACTCATCCACTAGGAGTATCAGAAATTGAAAGTGGAATAAATTTTGCAATTTTTTCGCAGCATGCTTCTGCAGTTACACTTTGCATAATTCTTCCAAAGAGGTTAGACTCACGCTTTTGGATGGTATATTTTGTTGTCTTTAATTCTGGTCTTAGTTGCAAATTCTAGATATTAAATTCTACTACTGTTAATCCTGCCTATTAAATTTGTTAATGTTGAGATATTATTTGATTTGCAAAATCAGAGTGATTTGATATTACTAGGATTGGTTTTGTAAATATACACCAACCAAAAATGTATACAAGGTGTAATAGTAGTAATCCCATCCAAGCTTAAGGGAACAATCAAGCTTTCCGTTTCTTCTCATTCTTTTCCCAATGTTCAATGGTATTAGACTCAGAGGAATTCTCATATGATCTTTCCTTTCCTTCTTATCCTCCAAATCCTCTGGATGGAAAAGATAAACTTCCGTTCTGCCCAATTTAATCTGGAGGTGTAGGAGTAAGTTGAGCGTCACCTCCTATACAAGAAGTGTGACAGGGCTCGAGTGACCTTAGACCGTGAAGCTCATCACCAACAGCTTTCTTGTCCCCGTCAATGCATCGATTTGCCTCACCAGAGCTTAATCCATGTGCAGATGCGGGAGACAGAATTCTGGCATCTCTTCTGACTGAGCTCACCTGACAGCGAGCCATATCCAGTGGTCTCCTTTTCCGATTCATCACTTGTGACTCCAAATCACCTCAAGGATCTCTGGGAAATACCCGAGGGTCTTTCCGAAGCAACCTCTCTACCTCCACAAGGTAGTGGTAAAGTCTGGATACATTCTACTCTCTTTAGACCTTCACTTGTGGAATTTCAGTGGGTATGTTGTTGTAATATGAATAATTCTAACCTAACATAGATTGGATTATGGAAAGCCAGTGGGTTAGGTTGTTTTCCATGCATACTGGGAGATAAATAGGAGAGGTTGAAGAGAGGGGTATGGGATGCCTTACATTATCTATTCCAATATATTTGAAACGGGAAGGACAACATATGCCCTTCTTAATTCCCCCCCTGTAATTATATCAACAAGGAGGTGGGTGGGATGCCAAATGTAAGTAAAAGCTTTCTGAACAGCATAGGAACGTTTCATCTTAAATTCAACTTGTAGGTATCGTCACATCCCTTCATCTATTGCAACATTTCATCTAAGATGGAGAAAATCTAGAAACTATGTTAATGAAATGGTGTTAAACATTCTGGTGAACCCAGCATAACCTTTTCTGCAGTAATTGACGTTGTATCACCTTGAGATACCATTATAAATTTAGTATGTAGTAAATGTTCAAAAGATTTGTTACACTTAGGATGAAGTACCATATATTTACAAAGACTTTGGAGTATTGAACAGTTTAAAACTACCTGTTCATTCTTCTTGCCAGGGAATAGTACTATCCCTGGTGAGCTCATGCTCATTTTTCTCATATATCATATGCACATCTGCGTAAAGCATGTTGAGTGAATATATGTTACATGGGAATGCTTGACAGTGTTCATGATGGAATGATTGAATTAGCATTGGATCCACAGAAGAACCGCACCGGAGACATATGGCACATATGCATTAAGGTAGTAATTTAACTATTTTATGTACCTTCATTACTGTATTCACTCAGCAATCTTCAAAGATTATATGATTTGGATGCTCATCGTATCATGTTGGCTGTCCACTTTCTACTCTCTTTTTGCTATTAATTGACCTGCTCCCTATTGTAGGCAGTGTCAAATGATTGATCTCCTTCCTTAATGAATACTCAAATGTGTCCATAGTTTCAATATAAAGTAAACATATTGTGGTTTTCTGTTACATTTTTAAAAGAGAAGTTAACATATTGTAGTTAGAACTGAATGTCATCCAATTGTATGTCCAATGATTATTTGAATTTAATTTATCTTTCCTGTTATTCTGTCGAATAAAAACATTTCAAATCCTTTCTGTAGAGTCATTGAGTTGTCCTAGTAAGTCAAATGACCTCACATATTTGGTAGGGTATCTAGCAATTCTTTGACCTTGACCTCACATGTTTCCAACTTTTATTGAGAATATCCCAACTAAGTAAAACACATAAACTAATGAAACTTTCTTTCCTTAAATTTCCATGCTGGAGCTGGAAGGAAGTAGTTCACTTCAGATAGATGCATGGAATATGGATCTTGCTAATCTGAAAGGATTAAATAAAGGGATAAATTAAGATGAAAGAGAAGTAATGTAAATGTTGATTGTGTTAATTAATATGATTTTAGGAGACTTTATTTTTCCTTTCCTAGCATTATTGTAGGAACAAAATATTTTTTTTTTATTGTAAATTGATTGTCTTTCCTTAGTAAGGGTCCATTGCAAACTACCCCTTCTCTTTAAGAACCCTAATTGATTGTAGTAGACCTAGTTAGCATATTAGGGATGATCATGTTTAAGCATATTAGGGATGATCATGTGTACTAGCAGATTCAATTCAAGAACTTGGATGATTGCGATCTAGACCCCTAATTGAATAATTAAAGACAATAATAATACAAGACTAGTTACATTCTCCACTTAATCGAATAAGAACCATATATATCAAGCAAAGAGTTTAATATTACCTCTTAAAAAATCGTTCTTGTAAGGTTGTACAAGAAATCCTAAGTAACCAATACACGAAGATATGAATAAATAAAATCTCAATTTTATTGATAGCTATTCTGTGTCAAAAAGAATGAAATCAACGTGGGTGAATCTAGGGTAAATTTCTAAAACACTATCCCAAATAGCACGAGATTCAATATCTACTTTATGGAAATAATAGATAATAAAACCTAACTAGGAAACTTTAAACTAGGAAAATTGAACTAGACAATTTTTAAACCAGGAAAACATGGAAGATTAATGTCACACTAATTCTAGAACTACCTAACAAAATAAGGAAAGAAGTGTCCAATTTTCTCCTGAAAATACGCCTATTCCAACAGACTTGTGCATGTATTTCAGCCTCTTTTGGGGATCCATACATGCTATTAGGTTGGCTATATGAATCTTCACTGACCATATTTCCTCATTTATGTTTAAGCTCATGTTAATCATATACTAAAATAAATAAAAGTGAAAATAAGTCAAATTTCATTCCAATTACTTCCTTTGTATTTATTTGTTCAGATTGGACTTCTAACTCGTTCAAATGCATAATTATCTTTAAGTTTAACATTCACTAGTATCAATTTTGTAATCACAAATTTCCTTGGATGAATCAATAGTTTCCCATATTTTTGTACTGTTGGAACTGTGTAATGAAGGTATACATTTCTCTTTTCAGCAGGCCTTTCCGTGGTTTCTATTTTACTCACAGTTTATGCTGCTATGTCACTATTATATGCTATTATTGTGCTTGCTATATAACCTTTTCTTACTGTATTATTTTTTCTCCGTCATCCGCAGGAGTTGCCCCGAGGTGGGGTCCTTTATGGTTATCGCATTGATGGACCTCGAAATTGGCATGAAGGGCATCGATTTGACGATAGCATTATTTTGATTGATCCTTACGCAAAACTAATTGAAGGTCGACGAGCTTTTGGAGATGAAAGCAATAAAATGTGTAGATTTTTTGGAACTTATGATTTCAATAGCTTGCCTTTTGACTGGGGAGAAAATTACAAGCTTCCAAATGTACCGGAGGTAGATTGAGAAGAACTACTTGAATAACTTTTTTCCTCGTGTGCAAATCTAAAGATAATTTGCTTGCATGTTCAGCTATTTGACTTATGAGCTATGACTAGTGACAGAGCTGTCATTTTGTAAGTGCTCAAATTGTCTGCCATTTAGTTGATCTTGTTATTTCAAGTAAGAGGAGTTTCAGCTTAATCTTCTGTAGTAATATTATTGGTTCTTTGGTAGATTGAGCTGTAAGATTATAGTACTTAGATCTTTTATAACATTTTACTCTTAAGGATAGTTCGATTTGCATTTTACTTATGAGTGGATTATAATGTAGGGACTGCTTGTGTGGTGATTAATATGTAACAGATTGCTATGCAGTCATTAACGATCAAGGAATTGTTGTGTAGTGATTAAGAGATTATTGCCATACAAGAATAACCTTTTTTTAGTGACATTCTTGTCTTTGAATAGTCTAATCTCTGTATGGCTAATACACGTATTCTTGTTTCACATTGTATCTAGTATATAATATCACATAGATTCTCGTATAACTGAAGTTGTATTATTTGGATACCACCAACCAAATGTTGCATTACATAATGCGCGATTGTGCAACCAACCAAATGTTGTGTTATTCTATGCCCGAATATTTGCTGGATTTGTTACCACACAATCAACCAAACCAACCATTAACTCCTTGCAGTATATCCTCTTTTCTTTGGGCAGAAAGATCTTGTTATATATGAGATGAATGTTCGTGCTTTTACTGCTGATGA</genome_strand>
        <mrna_strand>CACAGATTCTCTTCTCCAAAATAGGGCCCGATGATTAGAGGACCACCACAAATCGTCCAGAAATGTCCAACCGGCATTGTAACAGTTAACCGGACCAATATAGTTCCACGAACGCACCGTCACGCTCTTCAAGATCTCCGGCAGCTTCGCCGGCGTGATAGTCTCAGGCTCTTCTCCTCTGACCAACGGATTCTGAAGTTTTGTACATCGGAGGAGGCGTTCCAACCTAGGTTGGTCGCAGCAGCTAAACTTCAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGAAGCTCCTCAAATGCTGGACGCTTGCCCTTCATTCAAAGTTTCCCCTGGTCTGGCTCATCCACTAGGAGTATCAGAAACTGAAAGTGGAATAAATTTTGCAATTTTTTCTCAGCATGCTTCTGCAGTTACACTTTGCATAATTCTTCCAAAGAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTCATGATGGAATGATTGAATTAGCATTGGATCCACAGAAGAACCGCACAGGAGACATATGGCACATATGCATTAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTTGCCCCAAGGGGGTGTCCTTTATGGTTATCGCATTGATGGACCTCGAAATTGGCATGAAGGGCATCGATTTGACGATAGCATTATTTTGGTTGATCCTTACGCAAAACTAATTGAAGGTCGACGAGTTTTTGGAGATGAAAGCAATAAAATGTGTAGATTTTTTGGAACTTATGATTTCAATAGCTTGCCTTTTGACTGGGGAGAAAATTACNAGCTTCCAAATATACCCGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGATCTTGTTATATATGAGATGAATGGTCGTGCTTTTACTGCTGATGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E450758" ref_strand="+" ref_description="SGN-E450758 [cSTS-10-G22]">
      <seq>cacagattctcttctccaaaaatagggcccgatgattagaggaccaccacaaatcgtccagaaatgtccaaccggcattgtaacagttaaccggaccaatatagttccacgaacgcaccgtcacgctcttcaagatctccggcagcttcgccggcgtgatagtctcaggctcttctcctctgaccaacggattctgaagttttgtacatcggaggaggcgttccaacctaggttggtcgcagcagctaaacttcaggaagaagctcctcaaatgctggacgcttgcccttcattcaaagtttcccctggtctggctcatccactaggagtatcagaaactgaaagtggaataaattttgcaattttttctcagcatgcttctgcagttacactttgcataattcttccaaagagtgttcatgatggaatgattgaattagcattggatccacagaagaaccgcacaggagacatatggcacatatgcattaaggagttgccccaagggggtgtcctttatggttatcgcattgatggacctcgaaattggcatgaagggcatcgatttgacgatagcattattttggttgatccttacgcaaaactaattgaaggtcgacgagtttttgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="60658" stop="54571"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="60360" g_stop="60115" g_length="246"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="256" r_length="256" r_score="0.858"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="60114" i_stop="58522" i_length="1593">
            <donor d_prob="0.957" d_score="0.92"/>
            <acceptor a_prob="0.965" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="58521" g_stop="58364" g_length="158"/>
          <reference_exon_boundary r_type="cDNA" r_start="257" r_stop="414" r_length="158" r_score="0.956"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="58363" i_stop="56930" i_length="1434">
            <donor d_prob="0.954" d_score="0.98"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="56929" g_stop="56851" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="415" r_stop="493" r_length="79" r_score="0.987"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="56850" i_stop="55008" i_length="1843">
            <donor d_prob="0.997" d_score="0.98"/>
            <acceptor a_prob="0.993" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="55007" g_stop="54871" g_length="137"/>
          <reference_exon_boundary r_type="cDNA" r_start="494" r_stop="630" r_length="137" r_score="0.964"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E450758" ref_strand="+">
        <total_alignment_score>0.923</total_alignment_score>
        <cumulative_length_of_scored_exons>620</cumulative_length_of_scored_exons>
        <coverage percentage="0.984" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E450758" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="60360" e_stop="60115"/>
          <exon e_start="58521" e_stop="58364"/>
          <exon e_start="56929" e_stop="56851"/>
          <exon e_start="55007" e_stop="54871"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAACGATTCTCTTCTCC-AAAATAGGGCCCGATGATAAGAGGACCACCACAAATCGTCCAGAAATGTACCACCGGCATTGTAACTGTTAACCGGACCAATATAGTTCAACGAACTCACCGTCA-------C--GATCTCCGGCAGCTTAGCCGGCGTGATAGTCTAAGGCTCTTCTCCTCTGACCACCGGATTCTGAAGTTTTGTACATCGGAGGAGGCGCTCCTACCTAGGTTGGTGGCAGCAGCTAAGCTTCAGGTACGAAATTCTCTTTCACGTGTAGTAACCCAACTCTGGCGAGTTCAGTCAGTTCTTTTTTCAAATCTTACTTAGACAAAGCAGTATAATCTGTGCTGATATCATGTAAATACAGAGCCAATGGATCAATTTCCTTGTAGTTATTATTCGAAGATCCCTCAATATCTCTACCTTTGATTATGCTATGAATACTATGGGTATATGAATGGACTGTACATTTTGTAAACAAGTACAAGAATATTAACACTTAATTTTTTGTCGAGGACTGCGTTTATAATGAGGTTGATACTTTTTATAAGCCTTGATCGGAGCCTGGTATAGGATTGATAATTTTCCTTCTAATATAAAAAGTATGAGTAGAAGGGCTCATTCCAGAAGTTTTTCCTTGAGGTGAAAGGGGAAGGGGCAATGGTACTTATGCAGAGTCGGGTTAAATGAGTTCTGCGGATAAGTGATTCGGTGCAAGCTCCTGCTGATGACATTGATGTAGAAAATCCATCTAGAATTGATTGAGCTAAGTGTTGAATCATAAGTAGGAGGGATAGCGCTTCCTTTTCTCTTTATATGTTCTTTCACTACTTATGCCTTATAGCGAGAAAAATAAGCTTCTTCCAGCTTCTGTCATGACTTCCCTTCCACTTTCCTGAACTCTTGCAGGACTTGATTTGCGGGAGATGAGGTTTAACTCCTATAGCTTTCCTTCTAACCATGCACACAAAAATGCCACATGTTTGATGTTTGAGTAGGGTCACTAAGGTCTATGTCAGTGCTTTGTTTAAGTGAGTGGTATGAGCACCTACTTTAACATTTCATATTCTAACTAATAAGACTTGGAACTTAATCTTTATCAGAAAAGTACACTTAACAGCAGTTCCCAGTACTTGTTACTAACTGAAATCAGAATTCTACCTAGACATATTATGTAAATGATCTTTTTTGTGATATTTACTTTTCCTGATAGCATCAAGAGTGTTATGTAGGAAGTGATGATGGACCAATTGGTCTAGAGAGCTGTCATCTCCTTTTTATAAGGACATGACCAATCCATCCCTCAAGTATATGGTGAAGGATTTGTTCTCTCATTTTCTCATTGCTATATCTTCTTCTTTCTTAGAAGTTACAACCTGAGACTAGATTAATGACCACCTCTCTACCTCCCCCTTAGGATTTATGCTGCTATCTGGCGACCTACCGAAACAGATGATCCTTCTTCCTCTTCCCCTCTCCCCAACCTCCCCAATTATGGCTTTTACCCTGATTTATTGTACACTTGGTAATTATTTCCCTGGTTTATCATATAATTTTGTCATTTTGTGTGGTTCAATTCTGATAGATTTACGTCTTGCATGTAAAGTTACTATGGTCATTTATCCACTGCATAATAAATCGGGTCAAATATCAGAATATAGAATGTCTCACCTATGATCTTATACAATACAAATGAGATATCCTAACTAATCCTAATTTTGTAAACCAAACGATGGCCAATTTTGCTTTCTTGGCTGACCTTTATTTTTAAAAGTGGACAAGATTACTACTGTCCTATGGGAAGCCTAAACTATTTGATTTCTTTATTTGTGCTCATGCTTTTAGGAAGAAGCTCCTCAAATGCTGGACACTTTACCTTCATTCGAAGTTTCCCCTGGTCTGACTCATCCACTAGGAGTATCAGAAATTGAAAGTGGAATAAATTTTGCAATTTTTTCGCAGCATGCTTCTGCAGTTACACTTTGCATAATTCTTCCAAAGAGGTTAGACTCACGCTTTTGGATGGTATATTTTGTTGTCTTTAATTCTGGTCTTAGTTGCAAATTCTAGATATTAAATTCTACTACTGTTAATCCTGCCTATTAAATTTGTTAATGTTGAGATATTATTTGATTTGCAAAATCAGAGTGATTTGATATTACTAGGATTGGTTTTGTAAATATACACCAACCAAAAATGTATACAAGGTGTAATAGTAGTAATCCCATCCAAGCTTAAGGGAACAATCAAGCTTTCCGTTTCTTCTCATTCTTTTCCCAATGTTCAATGGTATTAGACTCAGAGGAATTCTCATATGATCTTTCCTTTCCTTCTTATCCTCCAAATCCTCTGGATGGAAAAGATAAACTTCCGTTCTGCCCAATTTAATCTGGAGGTGTAGGAGTAAGTTGAGCGTCACCTCCTATACAAGAAGTGTGACAGGGCTCGAGTGACCTTAGACCGTGAAGCTCATCACCAACAGCTTTCTTGTCCCCGTCAATGCATCGATTTGCCTCACCAGAGCTTAATCCATGTGCAGATGCGGGAGACAGAATTCTGGCATCTCTTCTGACTGAGCTCACCTGACAGCGAGCCATATCCAGTGGTCTCCTTTTCCGATTCATCACTTGTGACTCCAAATCACCTCAAGGATCTCTGGGAAATACCCGAGGGTCTTTCCGAAGCAACCTCTCTACCTCCACAAGGTAGTGGTAAAGTCTGGATACATTCTACTCTCTTTAGACCTTCACTTGTGGAATTTCAGTGGGTATGTTGTTGTAATATGAATAATTCTAACCTAACATAGATTGGATTATGGAAAGCCAGTGGGTTAGGTTGTTTTCCATGCATACTGGGAGATAAATAGGAGAGGTTGAAGAGAGGGGTATGGGATGCCTTACATTATCTATTCCAATATATTTGAAACGGGAAGGACAACATATGCCCTTCTTAATTCCCCCCCTGTAATTATATCAACAAGGAGGTGGGTGGGATGCCAAATGTAAGTAAAAGCTTTCTGAACAGCATAGGAACGTTTCATCTTAAATTCAACTTGTAGGTATCGTCACATCCCTTCATCTATTGCAACATTTCATCTAAGATGGAGAAAATCTAGAAACTATGTTAATGAAATGGTGTTAAACATTCTGGTGAACCCAGCATAACCTTTTCTGCAGTAATTGACGTTGTATCACCTTGAGATACCATTATAAATTTAGTATGTAGTAAATGTTCAAAAGATTTGTTACACTTAGGATGAAGTACCATATATTTACAAAGACTTTGGAGTATTGAACAGTTTAAAACTACCTGTTCATTCTTCTTGCCAGGGAATAGTACTATCCCTGGTGAGCTCATGCTCATTTTTCTCATATATCATATGCACATCTGCGTAAAGCATGTTGAGTGAATATATGTTACATGGGAATGCTTGACAGTGTTCATGATGGAATGATTGAATTAGCATTGGATCCACAGAAGAACCGCACCGGAGACATATGGCACATATGCATTAAGGTAGTAATTTAACTATTTTATGTACCTTCATTACTGTATTCACTCAGCAATCTTCAAAGATTATATGATTTGGATGCTCATCGTATCATGTTGGCTGTCCACTTTCTACTCTCTTTTTGCTATTAATTGACCTGCTCCCTATTGTAGGCAGTGTCAAATGATTGATCTCCTTCCTTAATGAATACTCAAATGTGTCCATAGTTTCAATATAAAGTAAACATATTGTGGTTTTCTGTTACATTTTTAAAAGAGAAGTTAACATATTGTAGTTAGAACTGAATGTCATCCAATTGTATGTCCAATGATTATTTGAATTTAATTTATCTTTCCTGTTATTCTGTCGAATAAAAACATTTCAAATCCTTTCTGTAGAGTCATTGAGTTGTCCTAGTAAGTCAAATGACCTCACATATTTGGTAGGGTATCTAGCAATTCTTTGACCTTGACCTCACATGTTTCCAACTTTTATTGAGAATATCCCAACTAAGTAAAACACATAAACTAATGAAACTTTCTTTCCTTAAATTTCCATGCTGGAGCTGGAAGGAAGTAGTTCACTTCAGATAGATGCATGGAATATGGATCTTGCTAATCTGAAAGGATTAAATAAAGGGATAAATTAAGATGAAAGAGAAGTAATGTAAATGTTGATTGTGTTAATTAATATGATTTTAGGAGACTTTATTTTTCCTTTCCTAGCATTATTGTAGGAACAAAATATTTTTTTTTTATTGTAAATTGATTGTCTTTCCTTAGTAAGGGTCCATTGCAAACTACCCCTTCTCTTTAAGAACCCTAATTGATTGTAGTAGACCTAGTTAGCATATTAGGGATGATCATGTTTAAGCATATTAGGGATGATCATGTGTACTAGCAGATTCAATTCAAGAACTTGGATGATTGCGATCTAGACCCCTAATTGAATAATTAAAGACAATAATAATACAAGACTAGTTACATTCTCCACTTAATCGAATAAGAACCATATATATCAAGCAAAGAGTTTAATATTACCTCTTAAAAAATCGTTCTTGTAAGGTTGTACAAGAAATCCTAAGTAACCAATACACGAAGATATGAATAAATAAAATCTCAATTTTATTGATAGCTATTCTGTGTCAAAAAGAATGAAATCAACGTGGGTGAATCTAGGGTAAATTTCTAAAACACTATCCCAAATAGCACGAGATTCAATATCTACTTTATGGAAATAATAGATAATAAAACCTAACTAGGAAACTTTAAACTAGGAAAATTGAACTAGACAATTTTTAAACCAGGAAAACATGGAAGATTAATGTCACACTAATTCTAGAACTACCTAACAAAATAAGGAAAGAAGTGTCCAATTTTCTCCTGAAAATACGCCTATTCCAACAGACTTGTGCATGTATTTCAGCCTCTTTTGGGGATCCATACATGCTATTAGGTTGGCTATATGAATCTTCACTGACCATATTTCCTCATTTATGTTTAAGCTCATGTTAATCATATACTAAAATAAATAAAAGTGAAAATAAGTCAAATTTCATTCCAATTACTTCCTTTGTATTTATTTGTTCAGATTGGACTTCTAACTCGTTCAAATGCATAATTATCTTTAAGTTTAACATTCACTAGTATCAATTTTGTAATCACAAATTTCCTTGGATGAATCAATAGTTTCCCATATTTTTGTACTGTTGGAACTGTGTAATGAAGGTATACATTTCTCTTTTCAGCAGGCCTTTCCGTGGTTTCTATTTTACTCACAGTTTATGCTGCTATGTCACTATTATATGCTATTATTGTGCTTGCTATATAACCTTTTCTTACTGTATTATTTTTTCTCCGTCATCCGCAGGAGTTGCCCCGAGGTGGGGTCCTTTATGGTTATCGCATTGATGGACCTCGAAATTGGCATGAAGGGCATCGATTTGACGATAGCATTATTTTGATTGATCCTTACGCAAAACTAATTGAAGGTCGACGAGCTTTTGG</genome_strand>
        <mrna_strand>CACAGATTCTCTTCTCCAAAAATAGGGCCCGATGATTAGAGGACCACCACAAATCGTCCAGAAATGTCCAACCGGCATTGTAACAGTTAACCGGACCAATATAGTTCCACGAACGCACCGTCACGCTCTTCAAGATCTCCGGCAGCTTCGCCGGCGTGATAGTCTCAGGCTCTTCTCCTCTGACCAACGGATTCTGAAGTTTTGTACATCGGAGGAGGCGTTCCAACCTAGGTTGGTCGCAGCAGCTAAACTTCAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGAAGCTCCTCAAATGCTGGACGCTTGCCCTTCATTCAAAGTTTCCCCTGGTCTGGCTCATCCACTAGGAGTATCAGAAACTGAAAGTGGAATAAATTTTGCAATTTTTTCTCAGCATGCTTCTGCAGTTACACTTTGCATAATTCTTCCAAAGAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTCATGATGGAATGATTGAATTAGCATTGGATCCACAGAAGAACCGCACAGGAGACATATGGCACATATGCATTAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTTGCCCCAAGGGGGTGTCCTTTATGGTTATCGCATTGATGGACCTCGAAATTGGCATGAAGGGCATCGATTTGACGATAGCATTATTTTGGTTGATCCTTACGCAAAACTAATTGAAGGTCGACGAGTTTTTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E577881" ref_strand="-" ref_description="SGN-E577881 [LE08AH04]">
      <seq>agactgcctaccaaggtgctttggatgaggagattgagagtcctcaggcgtttgcttcgcaagtatagggaatcaaagaagattgacaaacacatgtatcatgacatgtacatgaaggtgaagggtaatgttttcaagaacaagcgtgtgctgatggaaaatatccacaagacaaaggctgagaaggctagagagaaaaccttgtccgaccaatttgaggctaggagggcaaagaacaaggcaagcagagaaagaaagtttgcaaggagagaagaacgtttggctcagggaccaggaggagagaagccagtacaacctgcagcaccagccgctgctgcaccagcccagccagcccagggatctaagaagtcgaagaaatgagcgtgatgaattgtaaggagggttggcgctatgcctactttttgtccttgttagtatggcagtttagtatgtttgatccctttgccctttttggccttttaactttaaaagacaatgttacttgtactgaatttgaaagctggtttaaatttttgatacgttgatccttttatatgttttaatcgtttttctccagagttattttgcattgtattgaattcttcttcttgttgcatttctctcttttttttgctagttgtgactattcaatggaatatagtccttttatggacgagagtcatttgctctgattttaactgttgcaagacaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="63330" stop="61760"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="63030" g_stop="62743" g_length="288"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="288" r_length="288" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="62742" i_stop="62565" i_length="178">
            <donor d_prob="0.513" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="62564" g_stop="62497" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="289" r_stop="356" r_length="68" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="62496" i_stop="62417" i_length="80">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.924" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="62416" g_stop="62061" g_length="356"/>
          <reference_exon_boundary r_type="cDNA" r_start="357" r_stop="712" r_length="356" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="713" polyA_stop="729"/>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E577881" ref_strand="-">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>712</cumulative_length_of_scored_exons>
        <coverage percentage="0.977" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E577881" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="63030" e_stop="62743"/>
          <exon e_start="62564" e_stop="62497"/>
          <exon e_start="62416" e_stop="62061"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGAGAAGAACGTTTGGCTCAGGTATTGTTTGAAGCTCATTAAAATTTCTAGGGAAAAGTTGGCTCTGACACTTGATGGAGTGCTCTACTCTACTCCATGTTTTATGGTTTTAAGAAACGTTTCATGCAATTATGGGATTTTATGTCCTTTTAAATAACTGCATAGGATTTTTTCTCATCTTTTCTGTTTCAAATTTCAGGGACCAGGAGGAGAGAAGCCAGTACAACCTGCAGCACCAGCCGCTGCTGCACCAGCCCAGCCAGCCCAGTAAGTTCATCTGCTATATTAATTGTAGTTTCTCCTAGGGCCTAGTTTGAACATCATTTGATGAGAATATGTCTTTTCAGGGGATCTAAGAAGTCGAAGAAATGAGCGTGATGAATTGTAAGGAGGGTTGGCGCTATGCCTACTTTTTGTCCTTGTTAGTATGGCAGTTTAGTATGTTTGATCCCTTTGCCCTTTTTGGCCTTTTAACTTTAAAAGACAATGTTACTTGTACTGAATTTGAAAGCTGGTTTAAATTTTTGATACGTTGATCCTTTTATATGTTTTAATCGTTTTTCTCCAGAGTTATTTTGCATTGTATTGAATTCTTCTTCTTGTTGCATTTCTCTCTTTTTTTTGCTAGTTGTGACTATTCAATGGAATATAGTCCTTTTATGGACGAGAGTCATTTGCTCTGATTTTAACTGTTGCAAGACAA</genome_strand>
        <mrna_strand>AGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGAGAAGAACGTTTGGCTCAG..................................................................................................................................................................................GGACCAGGAGGAGAGAAGCCAGTACAACCTGCAGCACCAGCCGCTGCTGCACCAGCCCAGCCAGCCCA................................................................................GGGATCTAAGAAGTCGAAGAAATGAGCGTGATGAATTGTAAGGAGGGTTGGCGCTATGCCTACTTTTTGTCCTTGTTAGTATGGCAGTTTAGTATGTTTGATCCCTTTGCCCTTTTTGGCCTTTTAACTTTAAAAGACAATGTTACTTGTACTGAATTTGAAAGCTGGTTTAAATTTTTGATACGTTGATCCTTTTATATGTTTTAATCGTTTTTCTCCAGAGTTATTTTGCATTGTATTGAATTCTTCTTCTTGTTGCATTTCTCTCTTTTTTTTGCTAGTTGTGACTATTCAATGGAATATAGTCCTTTTATGGACGAGAGTCATTTGCTCTGATTTTAACTGTTGCAAGACAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E391318" ref_strand="+" ref_description="SGN-E391318 [TUS-47-P21](-)">
      <seq>aatgaaggaggccaagaggaaaggccgtcactctggatatggtaagcgcaaaggtaccagggaggctagactgcctaccaaggtgctttggatgaggagattgagagtcctcaggcgtttgcttcgcaagtatagggaatcaaagaagattgacaaacacatgtatcatgacatgtacatgaaggtgaagggtaatgttttcaagaacaagcgtgtgctgatggaaaatatccacaagacaaaggctgagaaggctagagagaaaaccttgtccgaccaatttgaggctaggagggcaaagaacaaggcaagcagagaaagaaagtttgcaaggagagaagaacgtttggctcagggaccaggaggagagaagccagtacaacctgcagcaccagccgctgctgcaccagcccagccagcccagggatctaagaagtcgaagaaatgagcgtgatgaattgtaaggagggttggcgctatgcctactttttgtccttgttagtatggcagtttagtatgtttgatccctttgccctttttggccttttaactttaaaagacaatgttacttgtactgaatttgaaagctggtttaaatttttgatacgttgatccttttatatgttttaatcgtttttctccagagttattttgcattgtattgaattcttcttcttgttgcatttctctcttttttttgctagttgtgactattcaatggaatatagtccttttaggaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="63888" stop="61795"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="63588" g_stop="63548" g_length="41"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="41" r_length="41" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="63547" i_stop="63057" i_length="491">
            <donor d_prob="0.909" d_score="1.00"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63056" g_stop="62743" g_length="314"/>
          <reference_exon_boundary r_type="cDNA" r_start="42" r_stop="355" r_length="314" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="62742" i_stop="62565" i_length="178">
            <donor d_prob="0.513" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="62564" g_stop="62497" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="356" r_stop="423" r_length="68" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="62496" i_stop="62417" i_length="80">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.924" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="62416" g_stop="62091" g_length="326"/>
          <reference_exon_boundary r_type="cDNA" r_start="424" r_stop="748" r_length="325" r_score="0.979"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E391318" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>749</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E391318" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="63588" e_stop="63548"/>
          <exon e_start="63056" e_stop="62743"/>
          <exon e_start="62564" e_stop="62497"/>
          <exon e_start="62416" e_stop="62091"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATGGTACATCCTTGTCTTGACTGTGATTGCAGAAACTCATTTTTCATGCCCTAATTCAGTTTTTAGGTAGCTCTATCAGTTTGCTGTCAACCATTGGGCATTGGTTTTTTTCTTCTTCCAAATAGTCGTTAAAATGTTAGAAGGACTTGGATTTGATAACTCATTTCTCAATCATAATAGAGAAGAATATAAGAGGTGAACTTCCTATGAGAGTCTTTGGCCATAGATGTCATCTAGGCCAATTGAAGTGAGATACAGGAAATATAAGCCTATATTTAGTGTCACTTCATCTTTTTTGTCCTAACTAAATAGTTTTGTGTACTCCATACCTCAAGAAGTTATTTCAATGTAGGCACCTTTTTGGTTGCTTGGTTTGAAAGATTATCTTGCTCATATATTAACTGGCTAGAACTATGCCATTTCTCTCTTCTTTGTAACTAATGAATATTAGCAGGTGAAATTGCTCTGTTGGCTGATGTCTGTTCTTTTCTCAGGTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGAGAAGAACGTTTGGCTCAGGTATTGTTTGAAGCTCATTAAAATTTCTAGGGAAAAGTTGGCTCTGACACTTGATGGAGTGCTCTACTCTACTCCATGTTTTATGGTTTTAAGAAACGTTTCATGCAATTATGGGATTTTATGTCCTTTTAAATAACTGCATAGGATTTTTTCTCATCTTTTCTGTTTCAAATTTCAGGGACCAGGAGGAGAGAAGCCAGTACAACCTGCAGCACCAGCCGCTGCTGCACCAGCCCAGCCAGCCCAGTAAGTTCATCTGCTATATTAATTGTAGTTTCTCCTAGGGCCTAGTTTGAACATCATTTGATGAGAATATGTCTTTTCAGGGGATCTAAGAAGTCGAAGAAATGAGCGTGATGAATTGTAAGGAGGGTTGGCGCTATGCCTACTTTTTGTCCTTGTTAGTATGGCAGTTTAGTATGTTTGATCCCTTTGCCCTTTTTGGCCTTTTAACTTTAAAAGACAATGTTACTTGTACTGAATTTGAAAGCTGGTTTAAATTTTTGATACGTTGATCCTTTTATATGTTTTAATCGTTTTTCTCCAGAGTTATTTTGCATTGTATTGAATTCTTCTTCTTGTTGCATTTCTCTCTTTTTTTTGCTAGTTGTGACTATTCAATGGAATATAGTCCTTTTATGGACGAGAGTCA</genome_strand>
        <mrna_strand>AATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGAGAAGAACGTTTGGCTCAG..................................................................................................................................................................................GGACCAGGAGGAGAGAAGCCAGTACAACCTGCAGCACCAGCCGCTGCTGCACCAGCCCAGCCAGCCCA................................................................................GGGATCTAAGAAGTCGAAGAAATGAGCGTGATGAATTGTAAGGAGGGTTGGCGCTATGCCTACTTTTTGTCCTTGTTAGTATGGCAGTTTAGTATGTTTGATCCCTTTGCCCTTTTTGGCCTTTTAACTTTAAAAGACAATGTTACTTGTACTGAATTTGAAAGCTGGTTTAAATTTTTGATACGTTGATCCTTTTATATGTTTTAATCGTTTTTCTCCAGAGTTATTTTGCATTGTATTGAATTCTTCTTCTTGTTGCATTTCTCTCTTTTTTTTGCTAGTTGTGACTATTCAATGGAATATAGTCCTTTTA-GGAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E572323" ref_strand="+" ref_description="SGN-E572323 [31459]">
      <seq>gcgcaaaggtaccagggaggctagactgcctaccaaggtgctttggatgaggagattgagagtcctcaggcgtttgcttcgcaagtatagggaatcaaagaagattgacaaacacatgtatcatgacatgtacatgaaggtgaagggtaatgttttcaagaacaagcgtgtgctgatggaaaatatccacaagacaaaggctgagaaagctagagagaagaccttgtccgaccaatttgaggctaggagggcaaagaacaaggcaagcagagaaagaaagtttgcaaggagggaagaacgtttggctcagggaccaggaggagagaagccagtacaacaacctgcagcaccagccgctgccgcaccagcccagccagctcagggatctaagaagtcgaagaaatgagcatgatgaattgtaaggagggttggcgctatgcctactttttgtccttgttagtatggcagtttagtatgtttgatcccttccctttttggccttttaactttaaaagacaatgttacttgtatgaatttgaaagctggtttaaatttttgatacgttgatccttttatatgttttaatcatattttctctagagtcattttgcattggattgaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="63352" stop="61874"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="63052" g_stop="62743" g_length="310"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="310" r_length="310" r_score="0.990"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="62742" i_stop="62565" i_length="178">
            <donor d_prob="0.513" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.87"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="62564" g_stop="62497" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="311" r_stop="381" r_length="71" r_score="0.882"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="62496" i_stop="62417" i_length="80">
            <donor d_prob="1.000" d_score="0.83"/>
            <acceptor a_prob="0.924" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="62416" g_stop="62168" g_length="249"/>
          <reference_exon_boundary r_type="cDNA" r_start="382" r_stop="628" r_length="247" r_score="0.936"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E572323" ref_strand="+">
        <total_alignment_score>0.957</total_alignment_score>
        <cumulative_length_of_scored_exons>627</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E572323" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="63052" e_stop="62743"/>
          <exon e_start="62564" e_stop="62497"/>
          <exon e_start="62416" e_stop="62168"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGAGAAGAACGTTTGGCTCAGGTATTGTTTGAAGCTCATTAAAATTTCTAGGGAAAAGTTGGCTCTGACACTTGATGGAGTGCTCTACTCTACTCCATGTTTTATGGTTTTAAGAAACGTTTCATGCAATTATGGGATTTTATGTCCTTTTAAATAACTGCATAGGATTTTTTCTCATCTTTTCTGTTTCAAATTTCAGGGACCAGGAGGAGAGAAGCCAGT---ACAACCTGCAGCACCAGCCGCTGCTGCACCAGCCCAGCCAGCCCAGTAAGTTCATCTGCTATATTAATTGTAGTTTCTCCTAGGGCCTAGTTTGAACATCATTTGATGAGAATATGTCTTTTCAGGGGATCTAAGAAGTCGAAGAAATGAGCGTGATGAATTGTAAGGAGGGTTGGCGCTATGCCTACTTTTTGTCCTTGTTAGTATGGCAGTTTAGTATGTTTGATCCCTTTGCCCTTTTTGGCCTTTTAACTTTAAAAGACAATGTTACTTGTACTGAATTTGAAAGCTGGTTTAAATTTTTGATACGTTGATCCTTTTATATGTTTTAATCGT-TTTTCTCCAGAGTTATTTTGCATTGTATTGAATTCTTC</genome_strand>
        <mrna_strand>GCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAAGCTAGAGAGAAGACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGGGAAGAACGTTTGGCTCAG..................................................................................................................................................................................GGACCAGGAGGAGAGAAGCCAGTACAACAACCTGCAGCACCAGCCGCTGCCGCACCAGCCCAGCCAGCTCA................................................................................GGGATCTAAGAAGTCGAAGAAATGAGCATGATGAATTGTAAGGAGGGTTGGCGCTATGCCTACTTTTTGTCCTTGTTAGTATGGCAGTTTAGTATGTTTGATCCC-TT-CCCTTTTTGGCCTTTTAACTTTAAAAGACAATGTTACTTGTA-TGAATTTGAAAGCTGGTTTAAATTTTTGATACGTTGATCCTTTTATATGTTTTAATCATATTTTCTCTAGAGTCATTTTGCATTGGATTGAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E586869" ref_strand="-" ref_description="SGN-E586869 [75705]">
      <seq>tttggctcagggaccaggaggagagaagccagtacaacaacctgcagcaccagccgctgccgcaccagcccagccagctcagggatctaagaagtcgaagaaatgagcatgatgaattgtaaggagggttggcgctatgcctactttttgtccttgttagtatggcagtttagtatgtttgatcccttccctttttggccttttaactttaaaagacaatgttacttgtatgaatttgaaagctggtttaaatttttgatacgttgatccttttatatgttttaatcatattttctctagagtcattttgcattggattgaaaaaaaaaaataaaaaaaaaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="62868" stop="61874"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62752" g_stop="62743" g_length="10"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="10" r_length="10" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="62742" i_stop="62565" i_length="178">
            <donor d_prob="0.513" d_score="0.00"/>
            <acceptor a_prob="1.000" a_score="0.87"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="62564" g_stop="62497" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="11" r_stop="81" r_length="71" r_score="0.882"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="62496" i_stop="62417" i_length="80">
            <donor d_prob="1.000" d_score="0.83"/>
            <acceptor a_prob="0.924" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="62416" g_stop="62175" g_length="242"/>
          <reference_exon_boundary r_type="cDNA" r_start="82" r_stop="321" r_length="240" r_score="0.959"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="322" polyA_stop="342"/>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E586869" ref_strand="-">
        <total_alignment_score>0.942</total_alignment_score>
        <cumulative_length_of_scored_exons>320</cumulative_length_of_scored_exons>
        <coverage percentage="0.933" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E586869" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="62752" e_stop="62743"/>
          <exon e_start="62564" e_stop="62497"/>
          <exon e_start="62416" e_stop="62175"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTGGCTCAGGTATTGTTTGAAGCTCATTAAAATTTCTAGGGAAAAGTTGGCTCTGACACTTGATGGAGTGCTCTACTCTACTCCATGTTTTATGGTTTTAAGAAACGTTTCATGCAATTATGGGATTTTATGTCCTTTTAAATAACTGCATAGGATTTTTTCTCATCTTTTCTGTTTCAAATTTCAGGGACCAGGAGGAGAGAAGCCAGTA---CAACCTGCAGCACCAGCCGCTGCTGCACCAGCCCAGCCAGCCCAGTAAGTTCATCTGCTATATTAATTGTAGTTTCTCCTAGGGCCTAGTTTGAACATCATTTGATGAGAATATGTCTTTTCAGGGGATCTAAGAAGTCGAAGAAATGAGCGTGATGAATTGTAAGGAGGGTTGGCGCTATGCCTACTTTTTGTCCTTGTTAGTATGGCAGTTTAGTATGTTTGATCCCTTTGCCCTTTTTGGCCTTTTAACTTTAAAAGACAATGTTACTTGTACTGAATTTGAAAGCTGGTTTAAATTTTTGATACGTTGATCCTTTTATATGTTTTAATCGT-TTTTCTCCAGAGTTATTTTGCATTGTATTGA</genome_strand>
        <mrna_strand>TTTGGCTCAG..................................................................................................................................................................................GGACCAGGAGGAGAGAAGCCAGTACAACAACCTGCAGCACCAGCCGCTGCCGCACCAGCCCAGCCAGCTCA................................................................................GGGATCTAAGAAGTCGAAGAAATGAGCATGATGAATTGTAAGGAGGGTTGGCGCTATGCCTACTTTTTGTCCTTGTTAGTATGGCAGTTTAGTATGTTTGATCCC-TT-CCCTTTTTGGCCTTTTAACTTTAAAAGACAATGTTACTTGTA-TGAATTTGAAAGCTGGTTTAAATTTTTGATACGTTGATCCTTTTATATGTTTTAATCATATTTTCTCTAGAGTCATTTTGCATTGGATTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E458618" ref_strand="+" ref_description="SGN-E458618 [cPRO-6-G10]">
      <seq>tcaatctcgagacgaggagccgctgccgcaccagcccagccagctcagggatctaagaagtcgaagaaatgagcatgatgaattgtaaggagggttggcgctatgcctactttttgtccttgttagtatggcagtttagtatgtttgatcccttccctttttggccttttaactttaaaagacaatgttacttgtatgaatttgaaagctggtttaaatttttgatacgttgatccttttatatgttttaatcatattttctccagagtcatttttgcattggattgaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="62840" stop="61874"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62541" g_stop="62497" g_length="45"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="47" r_length="47" r_score="0.733"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="62496" i_stop="62417" i_length="80">
            <donor d_prob="1.000" d_score="0.73"/>
            <acceptor a_prob="0.924" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="62416" g_stop="62175" g_length="242"/>
          <reference_exon_boundary r_type="cDNA" r_start="48" r_stop="288" r_length="241" r_score="0.955"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="289" polyA_stop="302"/>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E458618" ref_strand="+">
        <total_alignment_score>0.955</total_alignment_score>
        <cumulative_length_of_scored_exons>287</cumulative_length_of_scored_exons>
        <coverage percentage="0.950" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E458618" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="62541" e_stop="62497"/>
          <exon e_start="62416" e_stop="62175"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACAACCTGCAG-C-ACCAGCCGCTGCTGCACCAGCCCAGCCAGCCCAGTAAGTTCATCTGCTATATTAATTGTAGTTTCTCCTAGGGCCTAGTTTGAACATCATTTGATGAGAATATGTCTTTTCAGGGGATCTAAGAAGTCGAAGAAATGAGCGTGATGAATTGTAAGGAGGGTTGGCGCTATGCCTACTTTTTGTCCTTGTTAGTATGGCAGTTTAGTATGTTTGATCCCTTTGCCCTTTTTGGCCTTTTAACTTTAAAAGACAATGTTACTTGTACTGAATTTGAAAGCTGGTTTAAATTTTTGATACGTTGATCCTTTTATATGTTTTAATCGT-TTTTCTCCAGAGTTA-TTTTGCATTGTATTGA</genome_strand>
        <mrna_strand>TCAATCTCGAGACGAGGAGCCGCTGCCGCACCAGCCCAGCCAGCTCA................................................................................GGGATCTAAGAAGTCGAAGAAATGAGCATGATGAATTGTAAGGAGGGTTGGCGCTATGCCTACTTTTTGTCCTTGTTAGTATGGCAGTTTAGTATGTTTGATCCC-TT-CCCTTTTTGGCCTTTTAACTTTAAAAGACAATGTTACTTGTA-TGAATTTGAAAGCTGGTTTAAATTTTTGATACGTTGATCCTTTTATATGTTTTAATCATATTTTCTCCAGAGTCATTTTTGCATTGGATTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E461628" ref_strand="+" ref_description="SGN-E461628 [cPRO-9-G9]">
      <seq>agccgctgccgcaccagcccagccagctcagggatctaagaagtcgaagaaatgagcatgatgaattgtaaggagggttggcgctatgcctactttttgtccttgttagtatggcagtttagtatgtttgatcccttccctttttggccttttaactttaaaagacaatgttacttgtatgaatttgaaagctggtttaaatttttgatacgttgatccttttatatgttttaatcatattttctccagagtcatttttgcattggattgaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="62826" stop="61874"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62526" g_stop="62497" g_length="30"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="30" r_length="30" r_score="0.933"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="62496" i_stop="62417" i_length="80">
            <donor d_prob="1.000" d_score="0.00"/>
            <acceptor a_prob="0.924" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="62416" g_stop="62175" g_length="242"/>
          <reference_exon_boundary r_type="cDNA" r_start="31" r_stop="271" r_length="241" r_score="0.955"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="272" polyA_stop="285"/>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E461628" ref_strand="+">
        <total_alignment_score>0.955</total_alignment_score>
        <cumulative_length_of_scored_exons>272</cumulative_length_of_scored_exons>
        <coverage percentage="0.954" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E461628" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="62526" e_stop="62497"/>
          <exon e_start="62416" e_stop="62175"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGCCGCTGCTGCACCAGCCCAGCCAGCCCAGTAAGTTCATCTGCTATATTAATTGTAGTTTCTCCTAGGGCCTAGTTTGAACATCATTTGATGAGAATATGTCTTTTCAGGGGATCTAAGAAGTCGAAGAAATGAGCGTGATGAATTGTAAGGAGGGTTGGCGCTATGCCTACTTTTTGTCCTTGTTAGTATGGCAGTTTAGTATGTTTGATCCCTTTGCCCTTTTTGGCCTTTTAACTTTAAAAGACAATGTTACTTGTACTGAATTTGAAAGCTGGTTTAAATTTTTGATACGTTGATCCTTTTATATGTTTTAATCGT-TTTTCTCCAGAGTTA-TTTTGCATTGTATTGA</genome_strand>
        <mrna_strand>AGCCGCTGCCGCACCAGCCCAGCCAGCTCA................................................................................GGGATCTAAGAAGTCGAAGAAATGAGCATGATGAATTGTAAGGAGGGTTGGCGCTATGCCTACTTTTTGTCCTTGTTAGTATGGCAGTTTAGTATGTTTGATCCC-TT-CCCTTTTTGGCCTTTTAACTTTAAAAGACAATGTTACTTGTA-TGAATTTGAAAGCTGGTTTAAATTTTTGATACGTTGATCCTTTTATATGTTTTAATCATATTTTCTCCAGAGTCATTTTTGCATTGGATTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E713079" ref_strand="+" ref_description="SGN-E713079 [FB06CF09]">
      <seq>catgcgtttgcttcgcaagtatagggaatcaaagaagattgacaaacacatgtatcatgacatgtacatgaaggtgaagggtaatgttttcaagaacaagcgtgtgctgatggaaaatatccacaagacaaaggctgagaaggctagagagaaaaccttgtccgaccaatttgaggctaggagggcaaagaacaaggcaagcagagaaagaaagtttgcaaggagagaagaacgtttggctcagggaccaggaggagagaagccagtacaacctgcagcaccagccgctgctgcaccagcccagccagcccagggatctaagaagtcgaagaaatgagcgtgatgaattgtaaggagggttggcgctatgcctactttttgtccttgttagtatggcagtttagtatgtttgatccctttgccctttttggccttttaactttaaaagacaatgttacttgtactgaatttgaaagctggtttaaatttttgatacgttgatccttttatatgttttaatcgtttttctccagagttattttgcattgtaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="63286" stop="61879"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62986" g_stop="62743" g_length="244"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="244" r_length="244" r_score="0.996"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="62742" i_stop="62565" i_length="178">
            <donor d_prob="0.513" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="62564" g_stop="62497" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="245" r_stop="312" r_length="68" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="62496" i_stop="62417" i_length="80">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.924" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="62416" g_stop="62180" g_length="237"/>
          <reference_exon_boundary r_type="cDNA" r_start="313" r_stop="549" r_length="237" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="550" polyA_stop="563"/>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E713079" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>549</cumulative_length_of_scored_exons>
        <coverage percentage="0.975" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E713079" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="62986" e_stop="62743"/>
          <exon e_start="62564" e_stop="62497"/>
          <exon e_start="62416" e_stop="62180"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGAGAAGAACGTTTGGCTCAGGTATTGTTTGAAGCTCATTAAAATTTCTAGGGAAAAGTTGGCTCTGACACTTGATGGAGTGCTCTACTCTACTCCATGTTTTATGGTTTTAAGAAACGTTTCATGCAATTATGGGATTTTATGTCCTTTTAAATAACTGCATAGGATTTTTTCTCATCTTTTCTGTTTCAAATTTCAGGGACCAGGAGGAGAGAAGCCAGTACAACCTGCAGCACCAGCCGCTGCTGCACCAGCCCAGCCAGCCCAGTAAGTTCATCTGCTATATTAATTGTAGTTTCTCCTAGGGCCTAGTTTGAACATCATTTGATGAGAATATGTCTTTTCAGGGGATCTAAGAAGTCGAAGAAATGAGCGTGATGAATTGTAAGGAGGGTTGGCGCTATGCCTACTTTTTGTCCTTGTTAGTATGGCAGTTTAGTATGTTTGATCCCTTTGCCCTTTTTGGCCTTTTAACTTTAAAAGACAATGTTACTTGTACTGAATTTGAAAGCTGGTTTAAATTTTTGATACGTTGATCCTTTTATATGTTTTAATCGTTTTTCTCCAGAGTTATTTTGCATTGT</genome_strand>
        <mrna_strand>CATGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGAGAAGAACGTTTGGCTCAG..................................................................................................................................................................................GGACCAGGAGGAGAGAAGCCAGTACAACCTGCAGCACCAGCCGCTGCTGCACCAGCCCAGCCAGCCCA................................................................................GGGATCTAAGAAGTCGAAGAAATGAGCGTGATGAATTGTAAGGAGGGTTGGCGCTATGCCTACTTTTTGTCCTTGTTAGTATGGCAGTTTAGTATGTTTGATCCCTTTGCCCTTTTTGGCCTTTTAACTTTAAAAGACAATGTTACTTGTACTGAATTTGAAAGCTGGTTTAAATTTTTGATACGTTGATCCTTTTATATGTTTTAATCGTTTTTCTCCAGAGTTATTTTGCATTGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E558767" ref_strand="-" ref_description="SGN-E558767 [18158]">
      <seq>gtacgacaacctgcagcaccagccgctgccgcaccagcccagccagctcagggatctaagaagtcgaagaaatgagcatgatgaattgtaaggagggttggcgctatgcctactttttgtccttgttagtatggcagtttagtatgtttgatcccttccctttttggccttttaactttaaaagacaatgttacttgtatgaatttgaaagctggtttaaatttttgatacgttgatccttttatatgttttaatcatattttctctagagtcattttgcattggaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="62841" stop="61879"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62546" g_stop="62497" g_length="50"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="50" r_length="50" r_score="0.880"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="62496" i_stop="62417" i_length="80">
            <donor d_prob="1.000" d_score="0.88"/>
            <acceptor a_prob="0.924" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="62416" g_stop="62182" g_length="235"/>
          <reference_exon_boundary r_type="cDNA" r_start="51" r_stop="283" r_length="233" r_score="0.962"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="286" polyA_stop="299"/>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E558767" ref_strand="-">
        <total_alignment_score>0.947</total_alignment_score>
        <cumulative_length_of_scored_exons>285</cumulative_length_of_scored_exons>
        <coverage percentage="0.953" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E558767" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="62546" e_stop="62497"/>
          <exon e_start="62416" e_stop="62182"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCAGTACAACCTGCAGCACCAGCCGCTGCTGCACCAGCCCAGCCAGCCCAGTAAGTTCATCTGCTATATTAATTGTAGTTTCTCCTAGGGCCTAGTTTGAACATCATTTGATGAGAATATGTCTTTTCAGGGGATCTAAGAAGTCGAAGAAATGAGCGTGATGAATTGTAAGGAGGGTTGGCGCTATGCCTACTTTTTGTCCTTGTTAGTATGGCAGTTTAGTATGTTTGATCCCTTTGCCCTTTTTGGCCTTTTAACTTTAAAAGACAATGTTACTTGTACTGAATTTGAAAGCTGGTTTAAATTTTTGATACGTTGATCCTTTTATATGTTTTAATCGT-TTTTCTCCAGAGTTATTTTGCATT</genome_strand>
        <mrna_strand>GTACGACAACCTGCAGCACCAGCCGCTGCCGCACCAGCCCAGCCAGCTCA................................................................................GGGATCTAAGAAGTCGAAGAAATGAGCATGATGAATTGTAAGGAGGGTTGGCGCTATGCCTACTTTTTGTCCTTGTTAGTATGGCAGTTTAGTATGTTTGATCCC-TT-CCCTTTTTGGCCTTTTAACTTTAAAAGACAATGTTACTTGTA-TGAATTTGAAAGCTGGTTTAAATTTTTGATACGTTGATCCTTTTATATGTTTTAATCATATTTTCTCTAGAGTCATTTTGCATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E703154" ref_strand="+" ref_description="SGN-E703154 [FA20CH03]">
      <seq>acaaaatcgaaaatggtttcgttgaagctccagaagcggctcgccgctagtgtcctcaagtgtggaagaggcaaagtttggcttgatcctaatgaaggcaatgaaatctccatggccaattcccgtcaaaacatcaggaaattggttaaggatggtttcatcatcaggaaaccaaccaaaattcactcgagatctcgtgctcgccgaatgaaggaggccaagaggaaaggccgtcactctggatatggtaagcgcaaaggtaccagggaggctagactgcctaccaaggtgctttggatgaggagattgagagtcctcaggcgtttgcttcgcaagtatagggaatcaaagaagattgacaaacacatgtatcatgacatgtacatgaaggtgaagggtaatgttttcaagaacaagcgtgtgctgatggaaaatatccacaagacaaaggctgagaaggctagagagaaaaccttgtccgaccaatttgaggctaggagggcaaagaacaaggcaagcagagaaagaaagtttgcaaggagagaagaacgtttggctcagggaccaggaggagagaagccagtacaacctgcagcaccagccgctgctgcaccagcccagccagcccagggatctaagaagtcgaagaaatgagcgtgatgaattgtaaggagggttggcgctatgcctactttttgtccttgttagtatggcagtttagtatgtttgatccctttgccctttttggccttttaactttaaaagacaatgttacttgtactgaatttgaaagctggtttaaatttttgatacgttgatccttttatatgttttaatcgtttttctccnaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="65252" stop="61895"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64952" g_stop="64829" g_length="124"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="124" r_length="124" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64828" i_stop="63671" i_length="1158">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.955" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63670" g_stop="63548" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="125" r_stop="247" r_length="123" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63547" i_stop="63057" i_length="491">
            <donor d_prob="0.909" d_score="1.00"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="63056" g_stop="62743" g_length="314"/>
          <reference_exon_boundary r_type="cDNA" r_start="248" r_stop="561" r_length="314" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="62742" i_stop="62565" i_length="178">
            <donor d_prob="0.513" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="62564" g_stop="62497" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="562" r_stop="629" r_length="68" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="62496" i_stop="62417" i_length="80">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.924" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="62416" g_stop="62189" g_length="228"/>
          <reference_exon_boundary r_type="cDNA" r_start="630" r_stop="857" r_length="228" r_score="0.969"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E703154" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>857</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E703154" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64952" e_stop="64829"/>
          <exon e_start="63670" e_stop="63548"/>
          <exon e_start="63056" e_stop="62743"/>
          <exon e_start="62564" e_stop="62497"/>
          <exon e_start="62416" e_stop="62189"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACAAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCCGTATGTTTCTGTTTTCTGTTTGTTATCAATATCTATTTACGTTTATGCTATCTCTTTTAATCTCTTGTTTGTATGTTATGGCTTCTGATTGTGAAAGATCTATAGTAGGTTTTGATCAGTTTAGCTCCAACGATGCTTAGGTTATGTTACTTTATCGTTTCGCCGTCTTTTCTTGTGTGGAGTGTTTAATTTTGGAATTTGATCAACCGTAGTGTTGTTTTAACCACATATACTCTGATGTCGACCAGTTCAGATCCATAGAAGCATTGATTATTTGTGTTGAGGTTTTAGGTTTGGATTTTGATCAAACATTACAATGTTTCAACTGAATATACTGTTGAGGTATATTTTTGTCGTAGAGTTTGATCAGTTAAGCTCCAGTGTACCATAGATTAATTTACTGTTACTATCAATTTGCCTTTTGTTAGAGTTGCTGTTTTGAATTTGATCAGTATACTCCTTATGCATTGTTCACAAGATTAGCAGCATACTAATGTTTTTTTATTTATGTCTACTGTGTCAGCTTAGAGTGATATTTTTTAGGTTTTTGCATTGAAAACATATTTGTTTTTGGTAAACATGATTAACAAGGATGGTTGTTCTAGTGTTAAATGGATGCGAATAAACAATTATGCTGATTTTTTGGAAAACTGAAGATGTAGTGGATTGAAATTATTGGCAGATGTGGATAGGTTATGTGACAAGTTATATTTGCTGAAGTTTTTGAGTCGTGAGATTGAAATGTAATTGAGCTGTATATGTTCATTACAACACTGTCATTGTAATTTAATCAGTAATGATGATAGGTTACTAAACAGTGGGATGAATTAACTGCAATTATCTTTGTTATTGGTAGATGTCAATATGGAAAGATACCTATTTTGTGGGATTTCATTGGGTATGTTGTTGTATTGGCAGATATTTATTTGGTGTTGCTGCTTTGCGTTATTTGCCTCTTAATCTGATGTTTAGATGACAAAGTGATATTAATGTTTACTCAATCTAGATAACTAGAACATGTTTGCTGGAACAAGCTTATTGGTTGAGCTTGTGCAAGCCAGTTGCAATCCTTGTAGCTCTCCCTATGTCATTGTGCCAACTATTTTTTGTCATATTTCTATGAACTGCCCGTAATCCCTTCCTTTCCACTTAATACAGGTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATGGTACATCCTTGTCTTGACTGTGATTGCAGAAACTCATTTTTCATGCCCTAATTCAGTTTTTAGGTAGCTCTATCAGTTTGCTGTCAACCATTGGGCATTGGTTTTTTTCTTCTTCCAAATAGTCGTTAAAATGTTAGAAGGACTTGGATTTGATAACTCATTTCTCAATCATAATAGAGAAGAATATAAGAGGTGAACTTCCTATGAGAGTCTTTGGCCATAGATGTCATCTAGGCCAATTGAAGTGAGATACAGGAAATATAAGCCTATATTTAGTGTCACTTCATCTTTTTTGTCCTAACTAAATAGTTTTGTGTACTCCATACCTCAAGAAGTTATTTCAATGTAGGCACCTTTTTGGTTGCTTGGTTTGAAAGATTATCTTGCTCATATATTAACTGGCTAGAACTATGCCATTTCTCTCTTCTTTGTAACTAATGAATATTAGCAGGTGAAATTGCTCTGTTGGCTGATGTCTGTTCTTTTCTCAGGTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGAGAAGAACGTTTGGCTCAGGTATTGTTTGAAGCTCATTAAAATTTCTAGGGAAAAGTTGGCTCTGACACTTGATGGAGTGCTCTACTCTACTCCATGTTTTATGGTTTTAAGAAACGTTTCATGCAATTATGGGATTTTATGTCCTTTTAAATAACTGCATAGGATTTTTTCTCATCTTTTCTGTTTCAAATTTCAGGGACCAGGAGGAGAGAAGCCAGTACAACCTGCAGCACCAGCCGCTGCTGCACCAGCCCAGCCAGCCCAGTAAGTTCATCTGCTATATTAATTGTAGTTTCTCCTAGGGCCTAGTTTGAACATCATTTGATGAGAATATGTCTTTTCAGGGGATCTAAGAAGTCGAAGAAATGAGCGTGATGAATTGTAAGGAGGGTTGGCGCTATGCCTACTTTTTGTCCTTGTTAGTATGGCAGTTTAGTATGTTTGATCCCTTTGCCCTTTTTGGCCTTTTAACTTTAAAAGACAATGTTACTTGTACTGAATTTGAAAGCTGGTTTAAATTTTTGATACGTTGATCCTTTTATATGTTTTAATCGTTTTTCTCCAGAGTTATT</genome_strand>
        <mrna_strand>ACAAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGAGAAGAACGTTTGGCTCAG..................................................................................................................................................................................GGACCAGGAGGAGAGAAGCCAGTACAACCTGCAGCACCAGCCGCTGCTGCACCAGCCCAGCCAGCCCA................................................................................GGGATCTAAGAAGTCGAAGAAATGAGCGTGATGAATTGTAAGGAGGGTTGGCGCTATGCCTACTTTTTGTCCTTGTTAGTATGGCAGTTTAGTATGTTTGATCCCTTTGCCCTTTTTGGCCTTTTAACTTTAAAAGACAATGTTACTTGTACTGAATTTGAAAGCTGGTTTAAATTTTTGATACGTTGATCCTTTTATATGTTTTAATCGTTTTTCTCCNAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E733161" ref_strand="+" ref_description="SGN-E733161 [LB04AE10]">
      <seq>ccgctttcacaaaatcgaaaatggtttcgttgaagctccagaagcggctcgccgctagtgtcctcaagtgtggaagaggcaaagtttggcttgatcctaatgaaggcaatgaaatctccatggccaattcccgtcaaaacatcaggaaattggttaaggatggtttcatcatcaggaaaccaaccaaaattcactcgagatctcgtgctcgccgaatgaaggaggccaagaggaaaggccgtcactctggatatggtaagcgcaaaggtaccagggaggctagactgcctaccaaggtgctttggatgaggagattgagagtcctcaggcgtttgcttcgcaagtatagggaatcaaagaagattgacaaacacatgtatcatgacatgtacatgaaggtgaagggtaatgttttcaagaacaagcgtgtgctgatggaaaatatccacaagacaaaggctgagaaggctagagagaaaaccttgtccgaccaatttgaggctaggagggcaaagaacaaggcaagcagagaaagaaagtttgcaaggagagaagaacgtttggctcagggaccaggaggagagaagccagtacaacctgcagcaccagccgctgctgcaccagcccagccagcccagggatctaagaagtcgaagaaatgagcgtgatgaattgtaaggagggttggcgctatgcctactttttgtccttgttagtatggcagtttagtatgtttgatccctttgccctttttggccttttaactttaaaagacaatgttacttgtactgaatttgaaagctggtttaaatttttgatacgttgatccttttatatgttttaatcgtttttctcaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="65259" stop="61895"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64956" g_stop="64829" g_length="128"/>
          <reference_exon_boundary r_type="cDNA" r_start="5" r_stop="132" r_length="128" r_score="0.992"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64828" i_stop="63671" i_length="1158">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.955" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63670" g_stop="63548" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="133" r_stop="255" r_length="123" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63547" i_stop="63057" i_length="491">
            <donor d_prob="0.909" d_score="1.00"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="63056" g_stop="62743" g_length="314"/>
          <reference_exon_boundary r_type="cDNA" r_start="256" r_stop="569" r_length="314" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="62742" i_stop="62565" i_length="178">
            <donor d_prob="0.513" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="62564" g_stop="62497" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="570" r_stop="637" r_length="68" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="62496" i_stop="62417" i_length="80">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.924" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="62416" g_stop="62195" g_length="222"/>
          <reference_exon_boundary r_type="cDNA" r_start="638" r_stop="859" r_length="222" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="860" polyA_stop="871"/>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E733161" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>855</cumulative_length_of_scored_exons>
        <coverage percentage="0.982" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E733161" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64956" e_stop="64829"/>
          <exon e_start="63670" e_stop="63548"/>
          <exon e_start="63056" e_stop="62743"/>
          <exon e_start="62564" e_stop="62497"/>
          <exon e_start="62416" e_stop="62195"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTCACAAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCCGTATGTTTCTGTTTTCTGTTTGTTATCAATATCTATTTACGTTTATGCTATCTCTTTTAATCTCTTGTTTGTATGTTATGGCTTCTGATTGTGAAAGATCTATAGTAGGTTTTGATCAGTTTAGCTCCAACGATGCTTAGGTTATGTTACTTTATCGTTTCGCCGTCTTTTCTTGTGTGGAGTGTTTAATTTTGGAATTTGATCAACCGTAGTGTTGTTTTAACCACATATACTCTGATGTCGACCAGTTCAGATCCATAGAAGCATTGATTATTTGTGTTGAGGTTTTAGGTTTGGATTTTGATCAAACATTACAATGTTTCAACTGAATATACTGTTGAGGTATATTTTTGTCGTAGAGTTTGATCAGTTAAGCTCCAGTGTACCATAGATTAATTTACTGTTACTATCAATTTGCCTTTTGTTAGAGTTGCTGTTTTGAATTTGATCAGTATACTCCTTATGCATTGTTCACAAGATTAGCAGCATACTAATGTTTTTTTATTTATGTCTACTGTGTCAGCTTAGAGTGATATTTTTTAGGTTTTTGCATTGAAAACATATTTGTTTTTGGTAAACATGATTAACAAGGATGGTTGTTCTAGTGTTAAATGGATGCGAATAAACAATTATGCTGATTTTTTGGAAAACTGAAGATGTAGTGGATTGAAATTATTGGCAGATGTGGATAGGTTATGTGACAAGTTATATTTGCTGAAGTTTTTGAGTCGTGAGATTGAAATGTAATTGAGCTGTATATGTTCATTACAACACTGTCATTGTAATTTAATCAGTAATGATGATAGGTTACTAAACAGTGGGATGAATTAACTGCAATTATCTTTGTTATTGGTAGATGTCAATATGGAAAGATACCTATTTTGTGGGATTTCATTGGGTATGTTGTTGTATTGGCAGATATTTATTTGGTGTTGCTGCTTTGCGTTATTTGCCTCTTAATCTGATGTTTAGATGACAAAGTGATATTAATGTTTACTCAATCTAGATAACTAGAACATGTTTGCTGGAACAAGCTTATTGGTTGAGCTTGTGCAAGCCAGTTGCAATCCTTGTAGCTCTCCCTATGTCATTGTGCCAACTATTTTTTGTCATATTTCTATGAACTGCCCGTAATCCCTTCCTTTCCACTTAATACAGGTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATGGTACATCCTTGTCTTGACTGTGATTGCAGAAACTCATTTTTCATGCCCTAATTCAGTTTTTAGGTAGCTCTATCAGTTTGCTGTCAACCATTGGGCATTGGTTTTTTTCTTCTTCCAAATAGTCGTTAAAATGTTAGAAGGACTTGGATTTGATAACTCATTTCTCAATCATAATAGAGAAGAATATAAGAGGTGAACTTCCTATGAGAGTCTTTGGCCATAGATGTCATCTAGGCCAATTGAAGTGAGATACAGGAAATATAAGCCTATATTTAGTGTCACTTCATCTTTTTTGTCCTAACTAAATAGTTTTGTGTACTCCATACCTCAAGAAGTTATTTCAATGTAGGCACCTTTTTGGTTGCTTGGTTTGAAAGATTATCTTGCTCATATATTAACTGGCTAGAACTATGCCATTTCTCTCTTCTTTGTAACTAATGAATATTAGCAGGTGAAATTGCTCTGTTGGCTGATGTCTGTTCTTTTCTCAGGTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGAGAAGAACGTTTGGCTCAGGTATTGTTTGAAGCTCATTAAAATTTCTAGGGAAAAGTTGGCTCTGACACTTGATGGAGTGCTCTACTCTACTCCATGTTTTATGGTTTTAAGAAACGTTTCATGCAATTATGGGATTTTATGTCCTTTTAAATAACTGCATAGGATTTTTTCTCATCTTTTCTGTTTCAAATTTCAGGGACCAGGAGGAGAGAAGCCAGTACAACCTGCAGCACCAGCCGCTGCTGCACCAGCCCAGCCAGCCCAGTAAGTTCATCTGCTATATTAATTGTAGTTTCTCCTAGGGCCTAGTTTGAACATCATTTGATGAGAATATGTCTTTTCAGGGGATCTAAGAAGTCGAAGAAATGAGCGTGATGAATTGTAAGGAGGGTTGGCGCTATGCCTACTTTTTGTCCTTGTTAGTATGGCAGTTTAGTATGTTTGATCCCTTTGCCCTTTTTGGCCTTTTAACTTTAAAAGACAATGTTACTTGTACTGAATTTGAAAGCTGGTTTAAATTTTTGATACGTTGATCCTTTTATATGTTTTAATCGTTTTTCTCCAGA</genome_strand>
        <mrna_strand>TTTCACAAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGAGAAGAACGTTTGGCTCAG..................................................................................................................................................................................GGACCAGGAGGAGAGAAGCCAGTACAACCTGCAGCACCAGCCGCTGCTGCACCAGCCCAGCCAGCCCA................................................................................GGGATCTAAGAAGTCGAAGAAATGAGCGTGATGAATTGTAAGGAGGGTTGGCGCTATGCCTACTTTTTGTCCTTGTTAGTATGGCAGTTTAGTATGTTTGATCCCTTTGCCCTTTTTGGCCTTTTAACTTTAAAAGACAATGTTACTTGTACTGAATTTGAAAGCTGGTTTAAATTTTTGATACGTTGATCCTTTTATATGTTTTAATCGTTTTTCTCAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E373504" ref_strand="+" ref_description="SGN-E373504 [TUS-31-F18](-)">
      <seq>acatcaggaaattggttaaggatggtttcatcatcaggaaaccaaccaaaattcactcgagatctcgtgctcgccgaagaaggaggccaagaggaaaggccgtcactctggatatggtaagcgcaaaggtaccagggaggctagactgcctaccaaggtgctttggatgaggagattgagagtcctcaggcgtttgcttcgcaagtatagggaatcaaagaagattgacaaacacatgtatcatgacatgtacatgaaggtgaagggtaatgttttcaagaacaagcgtgtgctgatggaaaatatccacaagacaaaggctgagaaggctagagagaaaaccttgtccgaccaatttgaggctaggagggcaaagaacaaggcaagcagagaaagaaagtttgcaaggagagaagaacgtttggctcagggaccaggaggagagaagccagtacaacctgcagcaccagccgctgctgcaccagcccagccagcccagggatttaagaagtcgaagaaatgagcgtgatgaattgtaaggagggttggcgctatgcctactttttgtccttgttagtatggcagtttagtatgtttgatccctttgccctttttggccttttaactttaaaagacaatgttacttgtactgaatttgaaagctggtttaaatttttgatacgttgatccttttatatgttttaatcgtttttctccaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="63964" stop="61895"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="63664" g_stop="63548" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="116" r_length="116" r_score="0.991"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="63547" i_stop="63057" i_length="491">
            <donor d_prob="0.909" d_score="0.98"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63056" g_stop="62743" g_length="314"/>
          <reference_exon_boundary r_type="cDNA" r_start="117" r_stop="430" r_length="314" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="62742" i_stop="62565" i_length="178">
            <donor d_prob="0.513" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="62564" g_stop="62497" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="431" r_stop="498" r_length="68" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="62496" i_stop="62417" i_length="80">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.924" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="62416" g_stop="62195" g_length="222"/>
          <reference_exon_boundary r_type="cDNA" r_start="499" r_stop="720" r_length="222" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="721" polyA_stop="735"/>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E373504" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>721</cumulative_length_of_scored_exons>
        <coverage percentage="0.981" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E373504" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="63664" e_stop="63548"/>
          <exon e_start="63056" e_stop="62743"/>
          <exon e_start="62564" e_stop="62497"/>
          <exon e_start="62416" e_stop="62195"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATGGTACATCCTTGTCTTGACTGTGATTGCAGAAACTCATTTTTCATGCCCTAATTCAGTTTTTAGGTAGCTCTATCAGTTTGCTGTCAACCATTGGGCATTGGTTTTTTTCTTCTTCCAAATAGTCGTTAAAATGTTAGAAGGACTTGGATTTGATAACTCATTTCTCAATCATAATAGAGAAGAATATAAGAGGTGAACTTCCTATGAGAGTCTTTGGCCATAGATGTCATCTAGGCCAATTGAAGTGAGATACAGGAAATATAAGCCTATATTTAGTGTCACTTCATCTTTTTTGTCCTAACTAAATAGTTTTGTGTACTCCATACCTCAAGAAGTTATTTCAATGTAGGCACCTTTTTGGTTGCTTGGTTTGAAAGATTATCTTGCTCATATATTAACTGGCTAGAACTATGCCATTTCTCTCTTCTTTGTAACTAATGAATATTAGCAGGTGAAATTGCTCTGTTGGCTGATGTCTGTTCTTTTCTCAGGTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGAGAAGAACGTTTGGCTCAGGTATTGTTTGAAGCTCATTAAAATTTCTAGGGAAAAGTTGGCTCTGACACTTGATGGAGTGCTCTACTCTACTCCATGTTTTATGGTTTTAAGAAACGTTTCATGCAATTATGGGATTTTATGTCCTTTTAAATAACTGCATAGGATTTTTTCTCATCTTTTCTGTTTCAAATTTCAGGGACCAGGAGGAGAGAAGCCAGTACAACCTGCAGCACCAGCCGCTGCTGCACCAGCCCAGCCAGCCCAGTAAGTTCATCTGCTATATTAATTGTAGTTTCTCCTAGGGCCTAGTTTGAACATCATTTGATGAGAATATGTCTTTTCAGGGGATCTAAGAAGTCGAAGAAATGAGCGTGATGAATTGTAAGGAGGGTTGGCGCTATGCCTACTTTTTGTCCTTGTTAGTATGGCAGTTTAGTATGTTTGATCCCTTTGCCCTTTTTGGCCTTTTAACTTTAAAAGACAATGTTACTTGTACTGAATTTGAAAGCTGGTTTAAATTTTTGATACGTTGATCCTTTTATATGTTTTAATCGTTTTTCTCCAGA</genome_strand>
        <mrna_strand>ACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAA-GAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGAGAAGAACGTTTGGCTCAG..................................................................................................................................................................................GGACCAGGAGGAGAGAAGCCAGTACAACCTGCAGCACCAGCCGCTGCTGCACCAGCCCAGCCAGCCCA................................................................................GGGATTTAAGAAGTCGAAGAAATGAGCGTGATGAATTGTAAGGAGGGTTGGCGCTATGCCTACTTTTTGTCCTTGTTAGTATGGCAGTTTAGTATGTTTGATCCCTTTGCCCTTTTTGGCCTTTTAACTTTAAAAGACAATGTTACTTGTACTGAATTTGAAAGCTGGTTTAAATTTTTGATACGTTGATCCTTTTATATGTTTTAATCGTTTTTCTCCAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E373505" ref_strand="+" ref_description="SGN-E373505 [TUS-31-F18]">
      <seq>catcaggaaattggttaaggatggtttcatcatcaggaaaccaaccaaaattcactcgagatctcgtgctcgccgaatgaaggaggccaagaggaaaggccgtcactctggatatggtaagcgcaaaggtaccagggaggctagactgcctaccaaggtgctttggatgaggagattgagagtcctcaggcgtttgcttcgcaagtatagggaatcaaagaagattgacaaacacatgtatcatgacatgtacatgaaggtgaagggtaatgttttcaagaacaagcgtgtgctgatggaaaatatccacaagacaaaggctgagaaggctagagagaaaaccttgtccgaccaatttgaggctaggagggcaaagaacaaggcaagcagagaaagaaagtttgcaaggagagaagaacgtttggctcagggaccaggaggagagaagccagtacaacctgcagcaccagccgctgctgcaccagcccagccagcccagggatctaagaagtcgaagaaatgagcgtgatgaattgtaaggagggttggcgctatgcctactttttgtccttgttagtatggcagtttagtatgtttgatccctttgccctttttggccttttaactttaaaagacaatgttacttgtactgaatttgaaagctggtttaaatttttgatacgttgatccttttatatgtttaatcgtttttctccaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="63963" stop="61895"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="63663" g_stop="63548" g_length="116"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="116" r_length="116" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="63547" i_stop="63057" i_length="491">
            <donor d_prob="0.909" d_score="1.00"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63056" g_stop="62743" g_length="314"/>
          <reference_exon_boundary r_type="cDNA" r_start="117" r_stop="430" r_length="314" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="62742" i_stop="62565" i_length="178">
            <donor d_prob="0.513" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="62564" g_stop="62497" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="431" r_stop="498" r_length="68" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="62496" i_stop="62417" i_length="80">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.924" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="62416" g_stop="62195" g_length="222"/>
          <reference_exon_boundary r_type="cDNA" r_start="499" r_stop="719" r_length="221" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="720" polyA_stop="734"/>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E373505" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>720</cumulative_length_of_scored_exons>
        <coverage percentage="0.981" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E373505" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="63663" e_stop="63548"/>
          <exon e_start="63056" e_stop="62743"/>
          <exon e_start="62564" e_stop="62497"/>
          <exon e_start="62416" e_stop="62195"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATGGTACATCCTTGTCTTGACTGTGATTGCAGAAACTCATTTTTCATGCCCTAATTCAGTTTTTAGGTAGCTCTATCAGTTTGCTGTCAACCATTGGGCATTGGTTTTTTTCTTCTTCCAAATAGTCGTTAAAATGTTAGAAGGACTTGGATTTGATAACTCATTTCTCAATCATAATAGAGAAGAATATAAGAGGTGAACTTCCTATGAGAGTCTTTGGCCATAGATGTCATCTAGGCCAATTGAAGTGAGATACAGGAAATATAAGCCTATATTTAGTGTCACTTCATCTTTTTTGTCCTAACTAAATAGTTTTGTGTACTCCATACCTCAAGAAGTTATTTCAATGTAGGCACCTTTTTGGTTGCTTGGTTTGAAAGATTATCTTGCTCATATATTAACTGGCTAGAACTATGCCATTTCTCTCTTCTTTGTAACTAATGAATATTAGCAGGTGAAATTGCTCTGTTGGCTGATGTCTGTTCTTTTCTCAGGTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGAGAAGAACGTTTGGCTCAGGTATTGTTTGAAGCTCATTAAAATTTCTAGGGAAAAGTTGGCTCTGACACTTGATGGAGTGCTCTACTCTACTCCATGTTTTATGGTTTTAAGAAACGTTTCATGCAATTATGGGATTTTATGTCCTTTTAAATAACTGCATAGGATTTTTTCTCATCTTTTCTGTTTCAAATTTCAGGGACCAGGAGGAGAGAAGCCAGTACAACCTGCAGCACCAGCCGCTGCTGCACCAGCCCAGCCAGCCCAGTAAGTTCATCTGCTATATTAATTGTAGTTTCTCCTAGGGCCTAGTTTGAACATCATTTGATGAGAATATGTCTTTTCAGGGGATCTAAGAAGTCGAAGAAATGAGCGTGATGAATTGTAAGGAGGGTTGGCGCTATGCCTACTTTTTGTCCTTGTTAGTATGGCAGTTTAGTATGTTTGATCCCTTTGCCCTTTTTGGCCTTTTAACTTTAAAAGACAATGTTACTTGTACTGAATTTGAAAGCTGGTTTAAATTTTTGATACGTTGATCCTTTTATATGTTTTAATCGTTTTTCTCCAGA</genome_strand>
        <mrna_strand>CATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGAGAAGAACGTTTGGCTCAG..................................................................................................................................................................................GGACCAGGAGGAGAGAAGCCAGTACAACCTGCAGCACCAGCCGCTGCTGCACCAGCCCAGCCAGCCCA................................................................................GGGATCTAAGAAGTCGAAGAAATGAGCGTGATGAATTGTAAGGAGGGTTGGCGCTATGCCTACTTTTTGTCCTTGTTAGTATGGCAGTTTAGTATGTTTGATCCCTTTGCCCTTTTTGGCCTTTTAACTTTAAAAGACAATGTTACTTGTACTGAATTTGAAAGCTGGTTTAAATTTTTGATACGTTGATCCTTTTATATG-TTTAATCGTTTTTCTCCAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E587935" ref_strand="-" ref_description="SGN-E587935 [41477]">
      <seq>tcaggaaattggttaaggatggtttcatcatcaggaaaccaaccagaattcactcaagatctcgtgctcgcagaatgaaggaggccaagaggaaaggccgtcactctggatatggtaagcgcaaaggtaccagggaggctagactgcctaccaaggtgctttggatgaggagattgagagtcctcaggcgtttgcttcgcaagtatagggaatcaaagaagattgacaaacacatgtatcatgacatgtacatgaaggtgaagggtaatgttttcaagaacaagcgtgtgctgatggaaaatatccacaagacaaaggctgagaaggctagagagaagaccttgtccgaccaatttgaggctaggagggcaaagaacaaggcaagcagagaaagaaagtttgcaaggagggaagaacgtttggctcagggaccaggaggagagaagccagtacaacaacctgcagcaccagctgctgccgcaccagcccagccagctcagggatctaagaagtcgaagaaatgagcaagatgaattgtaaggagggttggcgctatgcctactttttgtccttgttagtatggcagtttagtatgtttgatcccttccctttttggccttttaactttaaaagacaatgttacttgtatgaatttgaaagctggtttaaatttttgatacgttgatccttttatatgttttaatcatattttctccagaaaaaaaaaaataaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="63961" stop="61895"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="63661" g_stop="63548" g_length="114"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="114" r_length="114" r_score="0.974"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="63547" i_stop="63057" i_length="491">
            <donor d_prob="0.909" d_score="0.98"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63056" g_stop="62743" g_length="314"/>
          <reference_exon_boundary r_type="cDNA" r_start="115" r_stop="428" r_length="314" r_score="0.994"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="62742" i_stop="62565" i_length="178">
            <donor d_prob="0.513" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.85"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="62564" g_stop="62497" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="429" r_stop="499" r_length="71" r_score="0.868"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="62496" i_stop="62417" i_length="80">
            <donor d_prob="1.000" d_score="0.81"/>
            <acceptor a_prob="0.924" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="62416" g_stop="62195" g_length="222"/>
          <reference_exon_boundary r_type="cDNA" r_start="500" r_stop="719" r_length="220" r_score="0.964"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="720" polyA_stop="757"/>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E587935" ref_strand="-">
        <total_alignment_score>0.969</total_alignment_score>
        <cumulative_length_of_scored_exons>718</cumulative_length_of_scored_exons>
        <coverage percentage="0.948" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E587935" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="63661" e_stop="63548"/>
          <exon e_start="63056" e_stop="62743"/>
          <exon e_start="62564" e_stop="62497"/>
          <exon e_start="62416" e_stop="62195"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATGGTACATCCTTGTCTTGACTGTGATTGCAGAAACTCATTTTTCATGCCCTAATTCAGTTTTTAGGTAGCTCTATCAGTTTGCTGTCAACCATTGGGCATTGGTTTTTTTCTTCTTCCAAATAGTCGTTAAAATGTTAGAAGGACTTGGATTTGATAACTCATTTCTCAATCATAATAGAGAAGAATATAAGAGGTGAACTTCCTATGAGAGTCTTTGGCCATAGATGTCATCTAGGCCAATTGAAGTGAGATACAGGAAATATAAGCCTATATTTAGTGTCACTTCATCTTTTTTGTCCTAACTAAATAGTTTTGTGTACTCCATACCTCAAGAAGTTATTTCAATGTAGGCACCTTTTTGGTTGCTTGGTTTGAAAGATTATCTTGCTCATATATTAACTGGCTAGAACTATGCCATTTCTCTCTTCTTTGTAACTAATGAATATTAGCAGGTGAAATTGCTCTGTTGGCTGATGTCTGTTCTTTTCTCAGGTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGAGAAGAACGTTTGGCTCAGGTATTGTTTGAAGCTCATTAAAATTTCTAGGGAAAAGTTGGCTCTGACACTTGATGGAGTGCTCTACTCTACTCCATGTTTTATGGTTTTAAGAAACGTTTCATGCAATTATGGGATTTTATGTCCTTTTAAATAACTGCATAGGATTTTTTCTCATCTTTTCTGTTTCAAATTTCAGGGACCAGGAGGAGAGAAGCCAGT---ACAACCTGCAGCACCAGCCGCTGCTGCACCAGCCCAGCCAGCCCAGTAAGTTCATCTGCTATATTAATTGTAGTTTCTCCTAGGGCCTAGTTTGAACATCATTTGATGAGAATATGTCTTTTCAGGGGATCTAAGAAGTCGAAGAAATGAGCGTGATGAATTGTAAGGAGGGTTGGCGCTATGCCTACTTTTTGTCCTTGTTAGTATGGCAGTTTAGTATGTTTGATCCCTTTGCCCTTTTTGGCCTTTTAACTTTAAAAGACAATGTTACTTGTACTGAATTTGAAAGCTGGTTTAAATTTTTGATACGTTGATCCTTTTATATGTTTTAATCGT-TTTTCTCCAGA</genome_strand>
        <mrna_strand>TCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAGAATTCACTCAAGATCTCGTGCTCGCAGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAGACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGGGAAGAACGTTTGGCTCAG..................................................................................................................................................................................GGACCAGGAGGAGAGAAGCCAGTACAACAACCTGCAGCACCAGCTGCTGCCGCACCAGCCCAGCCAGCTCA................................................................................GGGATCTAAGAAGTCGAAGAAATGAGCAAGATGAATTGTAAGGAGGGTTGGCGCTATGCCTACTTTTTGTCCTTGTTAGTATGGCAGTTTAGTATGTTTGATCCC-TT-CCCTTTTTGGCCTTTTAACTTTAAAAGACAATGTTACTTGTA-TGAATTTGAAAGCTGGTTTAAATTTTTGATACGTTGATCCTTTTATATGTTTTAATCATATTTTCTCCAGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E596200" ref_strand="+" ref_description="SGN-E596200 [39489]">
      <seq>atgacatgtacatgaaggtgaagggtaatgttttcaagaacaagcgtgtgctgatggaaaatatccacaagacaaaggctgagaaggctagagagaagaccttgtccgaccaatttgaggctaggagggcaaagaacaaggcaagcagagaaagaaagtttgcaaggagggaagaacgtttggctcagggaccaggaggagagaagccagtacaacaacctgcagcaccagctgctgccgcaccagcccagccagctcagggatctaagaagtcgaagaaatgagcaagatgaattgtaaggagggttggcgctatgcctactttttgtccttgttagtatggcagtttagtatgtttgatcccttccctttttggccttttaactttaaaagacaatgttacttgtatgaatttgaaagctggtttaaatttttgatacgttgatccttttatatgttttaatcatattttctccagaaaaaaagaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="63230" stop="61895"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62930" g_stop="62743" g_length="188"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="188" r_length="188" r_score="0.989"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="62742" i_stop="62565" i_length="178">
            <donor d_prob="0.513" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.85"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="62564" g_stop="62497" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="189" r_stop="259" r_length="71" r_score="0.868"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="62496" i_stop="62417" i_length="80">
            <donor d_prob="1.000" d_score="0.81"/>
            <acceptor a_prob="0.924" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="62416" g_stop="62195" g_length="222"/>
          <reference_exon_boundary r_type="cDNA" r_start="260" r_stop="479" r_length="220" r_score="0.964"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E596200" ref_strand="+">
        <total_alignment_score>0.960</total_alignment_score>
        <cumulative_length_of_scored_exons>478</cumulative_length_of_scored_exons>
        <coverage percentage="0.978" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E596200" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="62930" e_stop="62743"/>
          <exon e_start="62564" e_stop="62497"/>
          <exon e_start="62416" e_stop="62195"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGAGAAGAACGTTTGGCTCAGGTATTGTTTGAAGCTCATTAAAATTTCTAGGGAAAAGTTGGCTCTGACACTTGATGGAGTGCTCTACTCTACTCCATGTTTTATGGTTTTAAGAAACGTTTCATGCAATTATGGGATTTTATGTCCTTTTAAATAACTGCATAGGATTTTTTCTCATCTTTTCTGTTTCAAATTTCAGGGACCAGGAGGAGAGAAGCCAGT---ACAACCTGCAGCACCAGCCGCTGCTGCACCAGCCCAGCCAGCCCAGTAAGTTCATCTGCTATATTAATTGTAGTTTCTCCTAGGGCCTAGTTTGAACATCATTTGATGAGAATATGTCTTTTCAGGGGATCTAAGAAGTCGAAGAAATGAGCGTGATGAATTGTAAGGAGGGTTGGCGCTATGCCTACTTTTTGTCCTTGTTAGTATGGCAGTTTAGTATGTTTGATCCCTTTGCCCTTTTTGGCCTTTTAACTTTAAAAGACAATGTTACTTGTACTGAATTTGAAAGCTGGTTTAAATTTTTGATACGTTGATCCTTTTATATGTTTTAATCGT-TTTTCTCCAGA</genome_strand>
        <mrna_strand>ATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAGACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGGGAAGAACGTTTGGCTCAG..................................................................................................................................................................................GGACCAGGAGGAGAGAAGCCAGTACAACAACCTGCAGCACCAGCTGCTGCCGCACCAGCCCAGCCAGCTCA................................................................................GGGATCTAAGAAGTCGAAGAAATGAGCAAGATGAATTGTAAGGAGGGTTGGCGCTATGCCTACTTTTTGTCCTTGTTAGTATGGCAGTTTAGTATGTTTGATCCC-TT-CCCTTTTTGGCCTTTTAACTTTAAAAGACAATGTTACTTGTA-TGAATTTGAAAGCTGGTTTAAATTTTTGATACGTTGATCCTTTTATATGTTTTAATCATATTTTCTCCAGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E622108" ref_strand="+" ref_description="SGN-E622108 [72471]">
      <seq>agaacgtttggctcagggaccaggaggagagaagccagtacaacaacctgcagcaccagctgctgccgcaccagcccagccagctcagggatctaagaagtcgaagaaatgagcaagatgaattgtaaggagggttggcgctatgcctactttttgtccttgttagtatggcagtttagtatgtttgatcccttccctttttggccttttaactttaaaagacaatgttacttgtatgaatttgaaagctggtttaaatttttgatacgttgatccttttatatgttttaatcatattttctccagaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="62868" stop="61895"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62758" g_stop="62743" g_length="16"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="16" r_length="16" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="62742" i_stop="62565" i_length="178">
            <donor d_prob="0.513" d_score="0.00"/>
            <acceptor a_prob="1.000" a_score="0.85"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="62564" g_stop="62497" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="17" r_stop="87" r_length="71" r_score="0.868"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="62496" i_stop="62417" i_length="80">
            <donor d_prob="1.000" d_score="0.81"/>
            <acceptor a_prob="0.924" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="62416" g_stop="62195" g_length="222"/>
          <reference_exon_boundary r_type="cDNA" r_start="88" r_stop="307" r_length="220" r_score="0.964"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="308" polyA_stop="329"/>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E622108" ref_strand="+">
        <total_alignment_score>0.941</total_alignment_score>
        <cumulative_length_of_scored_exons>306</cumulative_length_of_scored_exons>
        <coverage percentage="0.930" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E622108" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="62758" e_stop="62743"/>
          <exon e_start="62564" e_stop="62497"/>
          <exon e_start="62416" e_stop="62195"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAACGTTTGGCTCAGGTATTGTTTGAAGCTCATTAAAATTTCTAGGGAAAAGTTGGCTCTGACACTTGATGGAGTGCTCTACTCTACTCCATGTTTTATGGTTTTAAGAAACGTTTCATGCAATTATGGGATTTTATGTCCTTTTAAATAACTGCATAGGATTTTTTCTCATCTTTTCTGTTTCAAATTTCAGGGACCAGGAGGAGAGAAGCCAGT---ACAACCTGCAGCACCAGCCGCTGCTGCACCAGCCCAGCCAGCCCAGTAAGTTCATCTGCTATATTAATTGTAGTTTCTCCTAGGGCCTAGTTTGAACATCATTTGATGAGAATATGTCTTTTCAGGGGATCTAAGAAGTCGAAGAAATGAGCGTGATGAATTGTAAGGAGGGTTGGCGCTATGCCTACTTTTTGTCCTTGTTAGTATGGCAGTTTAGTATGTTTGATCCCTTTGCCCTTTTTGGCCTTTTAACTTTAAAAGACAATGTTACTTGTACTGAATTTGAAAGCTGGTTTAAATTTTTGATACGTTGATCCTTTTATATGTTTTAATCGT-TTTTCTCCAGA</genome_strand>
        <mrna_strand>AGAACGTTTGGCTCAG..................................................................................................................................................................................GGACCAGGAGGAGAGAAGCCAGTACAACAACCTGCAGCACCAGCTGCTGCCGCACCAGCCCAGCCAGCTCA................................................................................GGGATCTAAGAAGTCGAAGAAATGAGCAAGATGAATTGTAAGGAGGGTTGGCGCTATGCCTACTTTTTGTCCTTGTTAGTATGGCAGTTTAGTATGTTTGATCCC-TT-CCCTTTTTGGCCTTTTAACTTTAAAAGACAATGTTACTTGTA-TGAATTTGAAAGCTGGTTTAAATTTTTGATACGTTGATCCTTTTATATGTTTTAATCATATTTTCTCCAGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E716435" ref_strand="+" ref_description="SGN-E716435 [FB17AB11]">
      <seq>acaaaatcgaaaatggtttcgttgaagctccagaagcggctcgccgctagtgtcctcaagtgtggaagaggcaaagtttggcttgatcctaatgaaggcaatgaaatctccatggccaattcccgtcaaaacatcaggaaattggttaaggatggtttcatcatcaggaaaccaaccaaaattcactcgagatctcgtgctcgccgaatgaaggaggccaagaggaaaggccgtcactctggatatggtaagcgcaaaggtaccatggaggctagactgcctaccaaggtgctttggatgaggagattgagagtcctcaggcgtttgcttcgcaagtatagggaatcaaagaagattgacaaacacatgtatcatgacatgtacatgaaggtgaagggtaatgttttcaagaacaagcgtgtgctgatggaaaatatccacaagacaaaggctgagaaggctagagagaaaaccttgtccgaccaatttgaggctaggagggcaaagaacaaggcaagcagagaaagaaagtttgcaaggagagaagaacgtttggctcagggaccaggaggagagaagccagtacaacctgcagcaccagccgctgctgcaccagcccagccagcccagggatctaagaagtcgaagaaatgagcgtgatgaattgtaaggagggttggcgctatgcctactttttgtccttgttagtatggcagtttagtatgtttgatccctttgccctttttggccttttaactttaaaagacaatgttacttgtactgaatttgaaagctggtttaaatttttgatacgttgatccttttatatgttttaatcgtttttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="65252" stop="61901"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64952" g_stop="64829" g_length="124"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="124" r_length="124" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64828" i_stop="63671" i_length="1158">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.955" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63670" g_stop="63548" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="125" r_stop="247" r_length="123" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63547" i_stop="63057" i_length="491">
            <donor d_prob="0.909" d_score="1.00"/>
            <acceptor a_prob="0.975" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="63056" g_stop="62743" g_length="314"/>
          <reference_exon_boundary r_type="cDNA" r_start="248" r_stop="561" r_length="314" r_score="0.997"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="62742" i_stop="62565" i_length="178">
            <donor d_prob="0.513" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="62564" g_stop="62497" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="562" r_stop="629" r_length="68" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="62496" i_stop="62417" i_length="80">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.924" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="62416" g_stop="62201" g_length="216"/>
          <reference_exon_boundary r_type="cDNA" r_start="630" r_stop="845" r_length="216" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E716435" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>845</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E716435" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64952" e_stop="64829"/>
          <exon e_start="63670" e_stop="63548"/>
          <exon e_start="63056" e_stop="62743"/>
          <exon e_start="62564" e_stop="62497"/>
          <exon e_start="62416" e_stop="62201"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACAAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCCGTATGTTTCTGTTTTCTGTTTGTTATCAATATCTATTTACGTTTATGCTATCTCTTTTAATCTCTTGTTTGTATGTTATGGCTTCTGATTGTGAAAGATCTATAGTAGGTTTTGATCAGTTTAGCTCCAACGATGCTTAGGTTATGTTACTTTATCGTTTCGCCGTCTTTTCTTGTGTGGAGTGTTTAATTTTGGAATTTGATCAACCGTAGTGTTGTTTTAACCACATATACTCTGATGTCGACCAGTTCAGATCCATAGAAGCATTGATTATTTGTGTTGAGGTTTTAGGTTTGGATTTTGATCAAACATTACAATGTTTCAACTGAATATACTGTTGAGGTATATTTTTGTCGTAGAGTTTGATCAGTTAAGCTCCAGTGTACCATAGATTAATTTACTGTTACTATCAATTTGCCTTTTGTTAGAGTTGCTGTTTTGAATTTGATCAGTATACTCCTTATGCATTGTTCACAAGATTAGCAGCATACTAATGTTTTTTTATTTATGTCTACTGTGTCAGCTTAGAGTGATATTTTTTAGGTTTTTGCATTGAAAACATATTTGTTTTTGGTAAACATGATTAACAAGGATGGTTGTTCTAGTGTTAAATGGATGCGAATAAACAATTATGCTGATTTTTTGGAAAACTGAAGATGTAGTGGATTGAAATTATTGGCAGATGTGGATAGGTTATGTGACAAGTTATATTTGCTGAAGTTTTTGAGTCGTGAGATTGAAATGTAATTGAGCTGTATATGTTCATTACAACACTGTCATTGTAATTTAATCAGTAATGATGATAGGTTACTAAACAGTGGGATGAATTAACTGCAATTATCTTTGTTATTGGTAGATGTCAATATGGAAAGATACCTATTTTGTGGGATTTCATTGGGTATGTTGTTGTATTGGCAGATATTTATTTGGTGTTGCTGCTTTGCGTTATTTGCCTCTTAATCTGATGTTTAGATGACAAAGTGATATTAATGTTTACTCAATCTAGATAACTAGAACATGTTTGCTGGAACAAGCTTATTGGTTGAGCTTGTGCAAGCCAGTTGCAATCCTTGTAGCTCTCCCTATGTCATTGTGCCAACTATTTTTTGTCATATTTCTATGAACTGCCCGTAATCCCTTCCTTTCCACTTAATACAGGTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATGGTACATCCTTGTCTTGACTGTGATTGCAGAAACTCATTTTTCATGCCCTAATTCAGTTTTTAGGTAGCTCTATCAGTTTGCTGTCAACCATTGGGCATTGGTTTTTTTCTTCTTCCAAATAGTCGTTAAAATGTTAGAAGGACTTGGATTTGATAACTCATTTCTCAATCATAATAGAGAAGAATATAAGAGGTGAACTTCCTATGAGAGTCTTTGGCCATAGATGTCATCTAGGCCAATTGAAGTGAGATACAGGAAATATAAGCCTATATTTAGTGTCACTTCATCTTTTTTGTCCTAACTAAATAGTTTTGTGTACTCCATACCTCAAGAAGTTATTTCAATGTAGGCACCTTTTTGGTTGCTTGGTTTGAAAGATTATCTTGCTCATATATTAACTGGCTAGAACTATGCCATTTCTCTCTTCTTTGTAACTAATGAATATTAGCAGGTGAAATTGCTCTGTTGGCTGATGTCTGTTCTTTTCTCAGGTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGAGAAGAACGTTTGGCTCAGGTATTGTTTGAAGCTCATTAAAATTTCTAGGGAAAAGTTGGCTCTGACACTTGATGGAGTGCTCTACTCTACTCCATGTTTTATGGTTTTAAGAAACGTTTCATGCAATTATGGGATTTTATGTCCTTTTAAATAACTGCATAGGATTTTTTCTCATCTTTTCTGTTTCAAATTTCAGGGACCAGGAGGAGAGAAGCCAGTACAACCTGCAGCACCAGCCGCTGCTGCACCAGCCCAGCCAGCCCAGTAAGTTCATCTGCTATATTAATTGTAGTTTCTCCTAGGGCCTAGTTTGAACATCATTTGATGAGAATATGTCTTTTCAGGGGATCTAAGAAGTCGAAGAAATGAGCGTGATGAATTGTAAGGAGGGTTGGCGCTATGCCTACTTTTTGTCCTTGTTAGTATGGCAGTTTAGTATGTTTGATCCCTTTGCCCTTTTTGGCCTTTTAACTTTAAAAGACAATGTTACTTGTACTGAATTTGAAAGCTGGTTTAAATTTTTGATACGTTGATCCTTTTATATGTTTTAATCGTTTTTC</genome_strand>
        <mrna_strand>ACAAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGCGCAAAGGTACCATGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGAGAAGAACGTTTGGCTCAG..................................................................................................................................................................................GGACCAGGAGGAGAGAAGCCAGTACAACCTGCAGCACCAGCCGCTGCTGCACCAGCCCAGCCAGCCCA................................................................................GGGATCTAAGAAGTCGAAGAAATGAGCGTGATGAATTGTAAGGAGGGTTGGCGCTATGCCTACTTTTTGTCCTTGTTAGTATGGCAGTTTAGTATGTTTGATCCCTTTGCCCTTTTTGGCCTTTTAACTTTAAAAGACAATGTTACTTGTACTGAATTTGAAAGCTGGTTTAAATTTTTGATACGTTGATCCTTTTATATGTTTTAATCGTTTTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E595126" ref_strand="-" ref_description="SGN-E595126 [38392]">
      <seq>caagcgtgtgctgatggaaaatatccacaagacaaaggctgagaaggctagagagaagaccttgtccgaccaatttgaggctaggagggcaaagaacaaggcaagcagagaaagaaagtttgcaaggagggaagaacgtttggctcagggaccaggaggagagaagccagtacaacaacctgcagcaccagccgctgccgctccagcccagccagctcagggatccaagaagtcgaagaaatgagcatgatgaatttttaggagggttggcgccatgcctactttttgtgccttgttagtatgggcagttttttagtatggtttgatctcttccctttttggccttttaactttaaaagacgatgttacttgtatgaattggaaagctggtttaaatttttgatacgttgatccttttatatgttttaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="63190" stop="61910"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62890" g_stop="62743" g_length="148"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="148" r_length="148" r_score="0.986"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="62742" i_stop="62565" i_length="178">
            <donor d_prob="0.513" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.87"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="62564" g_stop="62497" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="149" r_stop="219" r_length="71" r_score="0.868"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="62496" i_stop="62417" i_length="80">
            <donor d_prob="1.000" d_score="0.81"/>
            <acceptor a_prob="0.924" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="62416" g_stop="62204" g_length="213"/>
          <reference_exon_boundary r_type="cDNA" r_start="220" r_stop="435" r_length="216" r_score="0.864"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E595126" ref_strand="-">
        <total_alignment_score>0.907</total_alignment_score>
        <cumulative_length_of_scored_exons>429</cumulative_length_of_scored_exons>
        <coverage percentage="0.986" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E595126" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="62890" e_stop="62743"/>
          <exon e_start="62564" e_stop="62497"/>
          <exon e_start="62416" e_stop="62204"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGAGAAGAACGTTTGGCTCAGGTATTGTTTGAAGCTCATTAAAATTTCTAGGGAAAAGTTGGCTCTGACACTTGATGGAGTGCTCTACTCTACTCCATGTTTTATGGTTTTAAGAAACGTTTCATGCAATTATGGGATTTTATGTCCTTTTAAATAACTGCATAGGATTTTTTCTCATCTTTTCTGTTTCAAATTTCAGGGACCAGGAGGAGAGAAGCCAGT---ACAACCTGCAGCACCAGCCGCTGCTGCACCAGCCCAGCCAGCCCAGTAAGTTCATCTGCTATATTAATTGTAGTTTCTCCTAGGGCCTAGTTTGAACATCATTTGATGAGAATATGTCTTTTCAGGGGATCTAAGAAGTCGAAGAAATGAGCGTGATGAATTGTAAGGAGGGTTGGCGCTATGCCTACTTTTTGT-CCTTGTTAGTAT-GGCAG---TTTAGTAT-GTTTGATCCCTTTGCCCTTTTTGGCCTTTTAACTTTAAAAGACAATGTTACTTGTACTGAATTTGAAAGCTGGTTTAAATTTTTGATACGTTGATCCTTTTATATGTTTTAATCGTTT</genome_strand>
        <mrna_strand>CAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAGACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGGGAAGAACGTTTGGCTCAG..................................................................................................................................................................................GGACCAGGAGGAGAGAAGCCAGTACAACAACCTGCAGCACCAGCCGCTGCCGCTCCAGCCCAGCCAGCTCA................................................................................GGGATCCAAGAAGTCGAAGAAATGAGCATGATGAATTTTTAGGAGGGTTGGCGCCATGCCTACTTTTTGTGCCTTGTTAGTATGGGCAGTTTTTTAGTATGGTTTGATCTC-TT-CCCTTTTTGGCCTTTTAACTTTAAAAGACGATGTTACTTGTA-TGAATTGGAAAGCTGGTTTAAATTTTTGATACGTTGATCCTTTTATATGTTTTAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E599383" ref_strand="-" ref_description="SGN-E599383 [52369]">
      <seq>ggtttcatcatcaggaaccatcccaaattcactcaagatctcgtgctcgcagaatgaaggaggccaagaggaaagcccgtcactctggatatggtaagcgcaaaggtaccagggaggttagactgcctaccaaggtgctttggatgaggagattgagagtcctcaggcgtttgcttcgcaagtatagggaatcaaagaagattgacaaacacatgtatcatgacatgtacatgaaggtgaagggtaatgttttcaagaacaagcgtgtgctgatggaaaatatccacaagacaaaggctgagaaggctagagagaagcccttgtccgaccaatttgaggctaggagggcaaagaacaaggcaagcagagaaagaaagtttgcaaggagggaagaacgtttggctcagggaccaggaggagagaagccagtacaacaacctgcagcaccagccgctgccgctccagcccagccagctcagggatccaagaagtcgaagaaatgagcatgatgaatttttaggagggttggcgccatgcctactttttgtccttgttagtatggcagtttagtatgtttgatctcttccctttttggccttttaactttaaaagacgatgttacttgtatgaattggaaagctggtttaaatttttgatacgttgatccttttatatgttttaatcata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="63941" stop="61906"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="63641" g_stop="63548" g_length="94"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="93" r_length="93" r_score="0.936"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="63547" i_stop="63057" i_length="491">
            <donor d_prob="0.909" d_score="0.96"/>
            <acceptor a_prob="0.975" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63056" g_stop="62743" g_length="314"/>
          <reference_exon_boundary r_type="cDNA" r_start="94" r_stop="407" r_length="314" r_score="0.987"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="62742" i_stop="62565" i_length="178">
            <donor d_prob="0.513" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.87"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="62564" g_stop="62497" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="408" r_stop="478" r_length="71" r_score="0.868"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="62496" i_stop="62417" i_length="80">
            <donor d_prob="1.000" d_score="0.81"/>
            <acceptor a_prob="0.924" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="62416" g_stop="62205" g_length="212"/>
          <reference_exon_boundary r_type="cDNA" r_start="479" r_stop="687" r_length="209" r_score="0.939"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E599383" ref_strand="-">
        <total_alignment_score>0.953</total_alignment_score>
        <cumulative_length_of_scored_exons>688</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E599383" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="63641" e_stop="63548"/>
          <exon e_start="63056" e_stop="62743"/>
          <exon e_start="62564" e_stop="62497"/>
          <exon e_start="62416" e_stop="62205"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATGGTACATCCTTGTCTTGACTGTGATTGCAGAAACTCATTTTTCATGCCCTAATTCAGTTTTTAGGTAGCTCTATCAGTTTGCTGTCAACCATTGGGCATTGGTTTTTTTCTTCTTCCAAATAGTCGTTAAAATGTTAGAAGGACTTGGATTTGATAACTCATTTCTCAATCATAATAGAGAAGAATATAAGAGGTGAACTTCCTATGAGAGTCTTTGGCCATAGATGTCATCTAGGCCAATTGAAGTGAGATACAGGAAATATAAGCCTATATTTAGTGTCACTTCATCTTTTTTGTCCTAACTAAATAGTTTTGTGTACTCCATACCTCAAGAAGTTATTTCAATGTAGGCACCTTTTTGGTTGCTTGGTTTGAAAGATTATCTTGCTCATATATTAACTGGCTAGAACTATGCCATTTCTCTCTTCTTTGTAACTAATGAATATTAGCAGGTGAAATTGCTCTGTTGGCTGATGTCTGTTCTTTTCTCAGGTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGAGAAGAACGTTTGGCTCAGGTATTGTTTGAAGCTCATTAAAATTTCTAGGGAAAAGTTGGCTCTGACACTTGATGGAGTGCTCTACTCTACTCCATGTTTTATGGTTTTAAGAAACGTTTCATGCAATTATGGGATTTTATGTCCTTTTAAATAACTGCATAGGATTTTTTCTCATCTTTTCTGTTTCAAATTTCAGGGACCAGGAGGAGAGAAGCCAGT---ACAACCTGCAGCACCAGCCGCTGCTGCACCAGCCCAGCCAGCCCAGTAAGTTCATCTGCTATATTAATTGTAGTTTCTCCTAGGGCCTAGTTTGAACATCATTTGATGAGAATATGTCTTTTCAGGGGATCTAAGAAGTCGAAGAAATGAGCGTGATGAATTGTAAGGAGGGTTGGCGCTATGCCTACTTTTTGTCCTTGTTAGTATGGCAGTTTAGTATGTTTGATCCCTTTGCCCTTTTTGGCCTTTTAACTTTAAAAGACAATGTTACTTGTACTGAATTTGAAAGCTGGTTTAAATTTTTGATACGTTGATCCTTTTATATGTTTTAATCGTT</genome_strand>
        <mrna_strand>GGTTTCATCATCAGG-AACCATCCCAAATTCACTCAAGATCTCGTGCTCGCAGAATGAAGGAGGCCAAGAGGAAAGCCCGTCACTCTGGATATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGCGCAAAGGTACCAGGGAGGTTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAGCCCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGGGAAGAACGTTTGGCTCAG..................................................................................................................................................................................GGACCAGGAGGAGAGAAGCCAGTACAACAACCTGCAGCACCAGCCGCTGCCGCTCCAGCCCAGCCAGCTCA................................................................................GGGATCCAAGAAGTCGAAGAAATGAGCATGATGAATTTTTAGGAGGGTTGGCGCCATGCCTACTTTTTGTCCTTGTTAGTATGGCAGTTTAGTATGTTTGATCTC-TT-CCCTTTTTGGCCTTTTAACTTTAAAAGACGATGTTACTTGTA-TGAATTGGAAAGCTGGTTTAAATTTTTGATACGTTGATCCTTTTATATGTTTTAATCATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E451599" ref_strand="+" ref_description="SGN-E451599 [cSTS-13-N17]">
      <seq>atatattcctcaggcgtttgcttcgcaagtatagggaatcaaagaagctgtgacaaacaccatgtatcatgaacatgtaccatgaaggtgaagggtaatgttttcaagaacaagcgtgtgctgatggaaaatatccacaagacaaaggctgagaaggctagagagaagaccttgtccgaccaatttgaggctaggagggcaaagaacaaggcaagcagagaaagaaagtttgcaaggagggaagaacgtttggctcagggaccaggaggagagaagccagtacaacaacctgcagcaccagccgctgccgcaccagcccagccagctcagggatctaagaagtcgaagaaatgagcatgatgaattgtaaggagggttggcgctatgcctactttttgtccttgttagtatggcagtttagtatgtttgatcccttccctttttggccttttaactttaaaagacaatgttacttgtatgaatttgaaagctggtttaaatttttgatacgttgatccttttatatgttttaatcaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="63294" stop="61908"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62996" g_stop="62743" g_length="254"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="258" r_length="258" r_score="0.941"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="62742" i_stop="62565" i_length="178">
            <donor d_prob="0.513" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.87"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="62564" g_stop="62497" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="259" r_stop="329" r_length="71" r_score="0.882"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="62496" i_stop="62417" i_length="80">
            <donor d_prob="1.000" d_score="0.83"/>
            <acceptor a_prob="0.924" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="62416" g_stop="62208" g_length="209"/>
          <reference_exon_boundary r_type="cDNA" r_start="330" r_stop="535" r_length="206" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="536" polyA_stop="550"/>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E451599" ref_strand="+">
        <total_alignment_score>0.949</total_alignment_score>
        <cumulative_length_of_scored_exons>531</cumulative_length_of_scored_exons>
        <coverage percentage="0.965" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E451599" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="62996" e_stop="62743"/>
          <exon e_start="62564" e_stop="62497"/>
          <exon e_start="62416" e_stop="62208"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGAT-TGACAAACA-CATGTATCATG-ACATGTA-CATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGAGAAGAACGTTTGGCTCAGGTATTGTTTGAAGCTCATTAAAATTTCTAGGGAAAAGTTGGCTCTGACACTTGATGGAGTGCTCTACTCTACTCCATGTTTTATGGTTTTAAGAAACGTTTCATGCAATTATGGGATTTTATGTCCTTTTAAATAACTGCATAGGATTTTTTCTCATCTTTTCTGTTTCAAATTTCAGGGACCAGGAGGAGAGAAGCCAGT---ACAACCTGCAGCACCAGCCGCTGCTGCACCAGCCCAGCCAGCCCAGTAAGTTCATCTGCTATATTAATTGTAGTTTCTCCTAGGGCCTAGTTTGAACATCATTTGATGAGAATATGTCTTTTCAGGGGATCTAAGAAGTCGAAGAAATGAGCGTGATGAATTGTAAGGAGGGTTGGCGCTATGCCTACTTTTTGTCCTTGTTAGTATGGCAGTTTAGTATGTTTGATCCCTTTGCCCTTTTTGGCCTTTTAACTTTAAAAGACAATGTTACTTGTACTGAATTTGAAAGCTGGTTTAAATTTTTGATACGTTGATCCTTTTATATGTTTTAATC</genome_strand>
        <mrna_strand>ATATATTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGCTGTGACAAACACCATGTATCATGAACATGTACCATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAGACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGGGAAGAACGTTTGGCTCAG..................................................................................................................................................................................GGACCAGGAGGAGAGAAGCCAGTACAACAACCTGCAGCACCAGCCGCTGCCGCACCAGCCCAGCCAGCTCA................................................................................GGGATCTAAGAAGTCGAAGAAATGAGCATGATGAATTGTAAGGAGGGTTGGCGCTATGCCTACTTTTTGTCCTTGTTAGTATGGCAGTTTAGTATGTTTGATCCC-TT-CCCTTTTTGGCCTTTTAACTTTAAAAGACAATGTTACTTGTA-TGAATTTGAAAGCTGGTTTAAATTTTTGATACGTTGATCCTTTTATATGTTTTAATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E610385" ref_strand="+" ref_description="SGN-E610385 [57545]">
      <seq>ggaaaatatccacaagacaaaggctgagaaggctagagagaagaccttgtccgaccaatttgaggctaggagggcaaagaacaaggcaagcagagaaagaaagtttgcaaggagggaagaacgtttggctcagggaccaggaggagagaagccagtacaacaacctgcagcaccagccgctgccgctccagcccagccagctcagggatccaagaagtcgaagaaatgagcatgatgaatttttaggaggtttggcgccatgcctactttttgtccttgttagtatggcagtttagtatgtttgatctcttccctttttggccttttaactttaaaagacgatgttacttgtatgaattggaaagctggtttaaatttttgatacgttgatccttttatatgttttaatcatattttcgccaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="63175" stop="61895"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62875" g_stop="62743" g_length="133"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="133" r_length="133" r_score="0.985"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="62742" i_stop="62565" i_length="178">
            <donor d_prob="0.513" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.87"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="62564" g_stop="62497" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="134" r_stop="204" r_length="71" r_score="0.868"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="62496" i_stop="62417" i_length="80">
            <donor d_prob="1.000" d_score="0.81"/>
            <acceptor a_prob="0.924" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="62416" g_stop="62208" g_length="209"/>
          <reference_exon_boundary r_type="cDNA" r_start="205" r_stop="410" r_length="206" r_score="0.943"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="422" polyA_stop="432"/>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E610385" ref_strand="+">
        <total_alignment_score>0.944</total_alignment_score>
        <cumulative_length_of_scored_exons>410</cumulative_length_of_scored_exons>
        <coverage percentage="0.949" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E610385" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="62875" e_stop="62743"/>
          <exon e_start="62564" e_stop="62497"/>
          <exon e_start="62416" e_stop="62208"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGAGAAGAACGTTTGGCTCAGGTATTGTTTGAAGCTCATTAAAATTTCTAGGGAAAAGTTGGCTCTGACACTTGATGGAGTGCTCTACTCTACTCCATGTTTTATGGTTTTAAGAAACGTTTCATGCAATTATGGGATTTTATGTCCTTTTAAATAACTGCATAGGATTTTTTCTCATCTTTTCTGTTTCAAATTTCAGGGACCAGGAGGAGAGAAGCCAGT---ACAACCTGCAGCACCAGCCGCTGCTGCACCAGCCCAGCCAGCCCAGTAAGTTCATCTGCTATATTAATTGTAGTTTCTCCTAGGGCCTAGTTTGAACATCATTTGATGAGAATATGTCTTTTCAGGGGATCTAAGAAGTCGAAGAAATGAGCGTGATGAATTGTAAGGAGGGTTGGCGCTATGCCTACTTTTTGTCCTTGTTAGTATGGCAGTTTAGTATGTTTGATCCCTTTGCCCTTTTTGGCCTTTTAACTTTAAAAGACAATGTTACTTGTACTGAATTTGAAAGCTGGTTTAAATTTTTGATACGTTGATCCTTTTATATGTTTTAATC</genome_strand>
        <mrna_strand>GGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAGACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGGGAAGAACGTTTGGCTCAG..................................................................................................................................................................................GGACCAGGAGGAGAGAAGCCAGTACAACAACCTGCAGCACCAGCCGCTGCCGCTCCAGCCCAGCCAGCTCA................................................................................GGGATCCAAGAAGTCGAAGAAATGAGCATGATGAATTTTTAGGAGGTTTGGCGCCATGCCTACTTTTTGTCCTTGTTAGTATGGCAGTTTAGTATGTTTGATCTC-TT-CCCTTTTTGGCCTTTTAACTTTAAAAGACGATGTTACTTGTA-TGAATTGGAAAGCTGGTTTAAATTTTTGATACGTTGATCCTTTTATATGTTTTAATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E579994" ref_strand="+" ref_description="SGN-E579994 [87129]">
      <seq>caagtatagggaatcaaagaagattgacaaacacatgtatcatgacatgtacatgaaggtgaagggtaatgttttcaagaacaagcgtgtgctgatggaaaatatccacaagacaaaggctgagaaggctagagagaagaccttgtccgaccaatttgaggctaggagggcaaagaacaaggcaagcagagaaagaaagttgcaaggagggaagaacgtttggctcagggaccaggaggagagaagccagtacaacaacctgcagcaccagctgctgccgcaccagcccagccagctcagggatctaagaagtcgaagaaatgagcaagatgaattgtaaggagggttggcgctatgcctactttttgtccttgttagtatggcagtttagtatgtttgatccnncttccctttttggcccttnnttaactttaaaagacaatgttacttgtatgaatttgaaagctggtttaaatttttgatacgttgatccttttatatgttttaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="63271" stop="61910"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62971" g_stop="62743" g_length="229"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="228" r_length="228" r_score="0.987"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="62742" i_stop="62565" i_length="178">
            <donor d_prob="0.513" d_score="0.96"/>
            <acceptor a_prob="1.000" a_score="0.85"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="62564" g_stop="62497" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="229" r_stop="299" r_length="71" r_score="0.868"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="62496" i_stop="62417" i_length="80">
            <donor d_prob="1.000" d_score="0.81"/>
            <acceptor a_prob="0.924" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="62416" g_stop="62211" g_length="206"/>
          <reference_exon_boundary r_type="cDNA" r_start="300" r_stop="507" r_length="208" r_score="0.937"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="508" polyA_stop="517"/>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E579994" ref_strand="+">
        <total_alignment_score>0.950</total_alignment_score>
        <cumulative_length_of_scored_exons>503</cumulative_length_of_scored_exons>
        <coverage percentage="0.973" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E579994" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="62971" e_stop="62743"/>
          <exon e_start="62564" e_stop="62497"/>
          <exon e_start="62416" e_stop="62211"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGAGAAGAACGTTTGGCTCAGGTATTGTTTGAAGCTCATTAAAATTTCTAGGGAAAAGTTGGCTCTGACACTTGATGGAGTGCTCTACTCTACTCCATGTTTTATGGTTTTAAGAAACGTTTCATGCAATTATGGGATTTTATGTCCTTTTAAATAACTGCATAGGATTTTTTCTCATCTTTTCTGTTTCAAATTTCAGGGACCAGGAGGAGAGAAGCCAGT---ACAACCTGCAGCACCAGCCGCTGCTGCACCAGCCCAGCCAGCCCAGTAAGTTCATCTGCTATATTAATTGTAGTTTCTCCTAGGGCCTAGTTTGAACATCATTTGATGAGAATATGTCTTTTCAGGGGATCTAAGAAGTCGAAGAAATGAGCGTGATGAATTGTAAGGAGGGTTGGCGCTATGCCTACTTTTTGTCCTTGTTAGTATGGCAGTTTAGTATGTTTGATCCCTTTGCCCTTTTTGG-CCTT--TTAACTTTAAAAGACAATGTTACTTGTACTGAATTTGAAAGCTGGTTTAAATTTTTGATACGTTGATCCTTTTATATGTTTTA</genome_strand>
        <mrna_strand>CAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAGACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAG-TTGCAAGGAGGGAAGAACGTTTGGCTCAG..................................................................................................................................................................................GGACCAGGAGGAGAGAAGCCAGTACAACAACCTGCAGCACCAGCTGCTGCCGCACCAGCCCAGCCAGCTCA................................................................................GGGATCTAAGAAGTCGAAGAAATGAGCAAGATGAATTGTAAGGAGGGTTGGCGCTATGCCTACTTTTTGTCCTTGTTAGTATGGCAGTTTAGTATGTTTGATCCNNCTTCCCTTTTTGGCCCTTNNTTAACTTTAAAAGACAATGTTACTTGTA-TGAATTTGAAAGCTGGTTTAAATTTTTGATACGTTGATCCTTTTATATGTTTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E586652" ref_strand="+" ref_description="SGN-E586652 [75485]">
      <seq>agaagaccttgtccgaccaatttgaggctaggagggcaaagaacaaggcaagcagagaaagaaagtttgcaaggagggaagaacgtttggctcagggaccaggaggagagaagccagtacaacaacctgcagcacagccgctgccgctccagcccagccagctcagggatccaagaagtcgaagaaatgagcatgatgaatttttaggagggttggcgccatgcctactttttgtccttgttagtatggcagtttagtatgtttgatctcttccctttttggccttttaactttaaaagacgatgttacttgtatgaattggaaagctggtttaaatttttgatacgttgatccttttatatgttttaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="63137" stop="61910"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62837" g_stop="62743" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="95" r_length="95" r_score="0.979"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="62742" i_stop="62565" i_length="178">
            <donor d_prob="0.513" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.85"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="62564" g_stop="62497" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="96" r_stop="165" r_length="70" r_score="0.853"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="62496" i_stop="62417" i_length="80">
            <donor d_prob="1.000" d_score="0.79"/>
            <acceptor a_prob="0.924" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="62416" g_stop="62211" g_length="206"/>
          <reference_exon_boundary r_type="cDNA" r_start="166" r_stop="368" r_length="203" r_score="0.947"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E586652" ref_strand="+">
        <total_alignment_score>0.938</total_alignment_score>
        <cumulative_length_of_scored_exons>369</cumulative_length_of_scored_exons>
        <coverage percentage="0.981" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E586652" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="62837" e_stop="62743"/>
          <exon e_start="62564" e_stop="62497"/>
          <exon e_start="62416" e_stop="62211"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGAGAAGAACGTTTGGCTCAGGTATTGTTTGAAGCTCATTAAAATTTCTAGGGAAAAGTTGGCTCTGACACTTGATGGAGTGCTCTACTCTACTCCATGTTTTATGGTTTTAAGAAACGTTTCATGCAATTATGGGATTTTATGTCCTTTTAAATAACTGCATAGGATTTTTTCTCATCTTTTCTGTTTCAAATTTCAGGGACCAGGAGGAGAGAAGCCAGT---ACAACCTGCAGCACCAGCCGCTGCTGCACCAGCCCAGCCAGCCCAGTAAGTTCATCTGCTATATTAATTGTAGTTTCTCCTAGGGCCTAGTTTGAACATCATTTGATGAGAATATGTCTTTTCAGGGGATCTAAGAAGTCGAAGAAATGAGCGTGATGAATTGTAAGGAGGGTTGGCGCTATGCCTACTTTTTGTCCTTGTTAGTATGGCAGTTTAGTATGTTTGATCCCTTTGCCCTTTTTGGCCTTTTAACTTTAAAAGACAATGTTACTTGTACTGAATTTGAAAGCTGGTTTAAATTTTTGATACGTTGATCCTTTTATATGTTTTA</genome_strand>
        <mrna_strand>AGAAGACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGGGAAGAACGTTTGGCTCAG..................................................................................................................................................................................GGACCAGGAGGAGAGAAGCCAGTACAACAACCTGCAGCA-CAGCCGCTGCCGCTCCAGCCCAGCCAGCTCA................................................................................GGGATCCAAGAAGTCGAAGAAATGAGCATGATGAATTTTTAGGAGGGTTGGCGCCATGCCTACTTTTTGTCCTTGTTAGTATGGCAGTTTAGTATGTTTGATCTC-TT-CCCTTTTTGGCCTTTTAACTTTAAAAGACGATGTTACTTGTA-TGAATTGGAAAGCTGGTTTAAATTTTTGATACGTTGATCCTTTTATATGTTTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E711589" ref_strand="+" ref_description="SGN-E711589 [FB02BF10]">
      <seq>cccataaagcgaaaatggtttcgttgaagctccagaagcggcccttcgctagtgtcctcaagtgtggaagaggcaaagtttggcttgatcctaatgaaggcaatgaaatctccatggccaattcccgtcaaaacatcaggaaattggttaaggatggtttcatcatcaggaaaccaaccaaaattcactcgagatctcgtgctcgccgaatgaaggaggccaagaggaaaggccgtcactctggatatggtaagcgcaaaggtaccagggaggctagactgcctaccaaggtgctttggatgaggagattgagagtcctcaggcgtttgcttcgcaagtatagggaatcaaagaagattgacaaacacatgtatcatgacatgtacatgaaggtgaagggtaatgttttcaagaacaagcgtgtgctgatggaaaatatccacaagacaaaggctgagaaggctagagagaaaaccttgtccgaccaatttgaggctaggagggcaaagaacaaggcaagcagagaaagaaagtttgcaaggagagaagaacgtttggctcagggaccaggaggagagaagccagtacaacctgcagcaccagccgctgctgcaccagcccagccagcccagggatctaagaagtcgaagaaatgagcgtgatgaattgtaaggagggttggcgctatgcctactttttgtccttgttagtatggcagtttagtatgtttgatccctttgccctttttggccttttaactttaaaagacaatgttacttgtactgaatttgaaagctggtttaaaattttgatacgttgatccttttatatgtttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="65253" stop="61912"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64953" g_stop="64829" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="126" r_length="126" r_score="0.944"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64828" i_stop="63671" i_length="1158">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.955" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63670" g_stop="63548" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="127" r_stop="249" r_length="123" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63547" i_stop="63057" i_length="491">
            <donor d_prob="0.909" d_score="1.00"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="63056" g_stop="62743" g_length="314"/>
          <reference_exon_boundary r_type="cDNA" r_start="250" r_stop="563" r_length="314" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="62742" i_stop="62565" i_length="178">
            <donor d_prob="0.513" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="62564" g_stop="62497" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="564" r_stop="631" r_length="68" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="62496" i_stop="62417" i_length="80">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.924" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="62416" g_stop="62212" g_length="205"/>
          <reference_exon_boundary r_type="cDNA" r_start="632" r_stop="836" r_length="205" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E711589" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>835</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E711589" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64953" e_stop="64829"/>
          <exon e_start="63670" e_stop="63548"/>
          <exon e_start="63056" e_stop="62743"/>
          <exon e_start="62564" e_stop="62497"/>
          <exon e_start="62416" e_stop="62212"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CACA-AAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCCGTATGTTTCTGTTTTCTGTTTGTTATCAATATCTATTTACGTTTATGCTATCTCTTTTAATCTCTTGTTTGTATGTTATGGCTTCTGATTGTGAAAGATCTATAGTAGGTTTTGATCAGTTTAGCTCCAACGATGCTTAGGTTATGTTACTTTATCGTTTCGCCGTCTTTTCTTGTGTGGAGTGTTTAATTTTGGAATTTGATCAACCGTAGTGTTGTTTTAACCACATATACTCTGATGTCGACCAGTTCAGATCCATAGAAGCATTGATTATTTGTGTTGAGGTTTTAGGTTTGGATTTTGATCAAACATTACAATGTTTCAACTGAATATACTGTTGAGGTATATTTTTGTCGTAGAGTTTGATCAGTTAAGCTCCAGTGTACCATAGATTAATTTACTGTTACTATCAATTTGCCTTTTGTTAGAGTTGCTGTTTTGAATTTGATCAGTATACTCCTTATGCATTGTTCACAAGATTAGCAGCATACTAATGTTTTTTTATTTATGTCTACTGTGTCAGCTTAGAGTGATATTTTTTAGGTTTTTGCATTGAAAACATATTTGTTTTTGGTAAACATGATTAACAAGGATGGTTGTTCTAGTGTTAAATGGATGCGAATAAACAATTATGCTGATTTTTTGGAAAACTGAAGATGTAGTGGATTGAAATTATTGGCAGATGTGGATAGGTTATGTGACAAGTTATATTTGCTGAAGTTTTTGAGTCGTGAGATTGAAATGTAATTGAGCTGTATATGTTCATTACAACACTGTCATTGTAATTTAATCAGTAATGATGATAGGTTACTAAACAGTGGGATGAATTAACTGCAATTATCTTTGTTATTGGTAGATGTCAATATGGAAAGATACCTATTTTGTGGGATTTCATTGGGTATGTTGTTGTATTGGCAGATATTTATTTGGTGTTGCTGCTTTGCGTTATTTGCCTCTTAATCTGATGTTTAGATGACAAAGTGATATTAATGTTTACTCAATCTAGATAACTAGAACATGTTTGCTGGAACAAGCTTATTGGTTGAGCTTGTGCAAGCCAGTTGCAATCCTTGTAGCTCTCCCTATGTCATTGTGCCAACTATTTTTTGTCATATTTCTATGAACTGCCCGTAATCCCTTCCTTTCCACTTAATACAGGTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATGGTACATCCTTGTCTTGACTGTGATTGCAGAAACTCATTTTTCATGCCCTAATTCAGTTTTTAGGTAGCTCTATCAGTTTGCTGTCAACCATTGGGCATTGGTTTTTTTCTTCTTCCAAATAGTCGTTAAAATGTTAGAAGGACTTGGATTTGATAACTCATTTCTCAATCATAATAGAGAAGAATATAAGAGGTGAACTTCCTATGAGAGTCTTTGGCCATAGATGTCATCTAGGCCAATTGAAGTGAGATACAGGAAATATAAGCCTATATTTAGTGTCACTTCATCTTTTTTGTCCTAACTAAATAGTTTTGTGTACTCCATACCTCAAGAAGTTATTTCAATGTAGGCACCTTTTTGGTTGCTTGGTTTGAAAGATTATCTTGCTCATATATTAACTGGCTAGAACTATGCCATTTCTCTCTTCTTTGTAACTAATGAATATTAGCAGGTGAAATTGCTCTGTTGGCTGATGTCTGTTCTTTTCTCAGGTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGAGAAGAACGTTTGGCTCAGGTATTGTTTGAAGCTCATTAAAATTTCTAGGGAAAAGTTGGCTCTGACACTTGATGGAGTGCTCTACTCTACTCCATGTTTTATGGTTTTAAGAAACGTTTCATGCAATTATGGGATTTTATGTCCTTTTAAATAACTGCATAGGATTTTTTCTCATCTTTTCTGTTTCAAATTTCAGGGACCAGGAGGAGAGAAGCCAGTACAACCTGCAGCACCAGCCGCTGCTGCACCAGCCCAGCCAGCCCAGTAAGTTCATCTGCTATATTAATTGTAGTTTCTCCTAGGGCCTAGTTTGAACATCATTTGATGAGAATATGTCTTTTCAGGGGATCTAAGAAGTCGAAGAAATGAGCGTGATGAATTGTAAGGAGGGTTGGCGCTATGCCTACTTTTTGTCCTTGTTAGTATGGCAGTTTAGTATGTTTGATCCCTTTGCCCTTTTTGGCCTTTTAACTTTAAAAGACAATGTTACTTGTACTGAATTTGAAAGCTGGTTTAAATTTTTGATACGTTGATCCTTTTATATGTTTT</genome_strand>
        <mrna_strand>CCCATAAAGCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCCCTTCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGAGAAGAACGTTTGGCTCAG..................................................................................................................................................................................GGACCAGGAGGAGAGAAGCCAGTACAACCTGCAGCACCAGCCGCTGCTGCACCAGCCCAGCCAGCCCA................................................................................GGGATCTAAGAAGTCGAAGAAATGAGCGTGATGAATTGTAAGGAGGGTTGGCGCTATGCCTACTTTTTGTCCTTGTTAGTATGGCAGTTTAGTATGTTTGATCCCTTTGCCCTTTTTGGCCTTTTAACTTTAAAAGACAATGTTACTTGTACTGAATTTGAAAGCTGGTTTAAAATTTTGATACGTTGATCCTTTTATATGTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E711959" ref_strand="+" ref_description="SGN-E711959 [FB03CA04]">
      <seq>cattatcaggaaaccaaccaaaattcactcgagatctcgtgctcgccgaatgaaggaggccaagaggaaaggccgtcactctggatatggtaagcgcaaaggtaccagggaggctagactgcctaccaaggtgctttggatgaggagattgagagtcctcaggcgtttgcttcgcaagtatagggaatcaaagaagattgacaaacacatgtatcatgacatgtacatgaaggtgaagggtaatgttttcaagaacaagcgtgtgctgatggaaaatatccacaagacaaaggctgagaaggctagagagaaaaccttgtccgaccaatttgaggctaggagggcaaagaacaaggcaagcagagaaagaaagtttgcaaggagagaagaacgtttggctcagggaccaggaggagagaagccagtacaacctgcagcaccagccgctgctgcaccagcccagccagcccagggatctaagaagtcgaagaaatgagcgtgatgaattgtaaggagggttggcgctatgcctactttttgtccttgttagtatggcagtttagtatgtttgatccctttgccctttttggccttttaactttaaaagacaatgttacttgtactgaatttgaaagctggtttaaatttttgatacgttgatccttttatatgttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="63936" stop="61913"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="63636" g_stop="63548" g_length="89"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="89" r_length="89" r_score="0.989"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="63547" i_stop="63057" i_length="491">
            <donor d_prob="0.909" d_score="1.00"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63056" g_stop="62743" g_length="314"/>
          <reference_exon_boundary r_type="cDNA" r_start="90" r_stop="403" r_length="314" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="62742" i_stop="62565" i_length="178">
            <donor d_prob="0.513" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="62564" g_stop="62497" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="404" r_stop="471" r_length="68" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="62496" i_stop="62417" i_length="80">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.924" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="62416" g_stop="62213" g_length="204"/>
          <reference_exon_boundary r_type="cDNA" r_start="472" r_stop="675" r_length="204" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E711959" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>675</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E711959" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="63636" e_stop="63548"/>
          <exon e_start="63056" e_stop="62743"/>
          <exon e_start="62564" e_stop="62497"/>
          <exon e_start="62416" e_stop="62213"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATGGTACATCCTTGTCTTGACTGTGATTGCAGAAACTCATTTTTCATGCCCTAATTCAGTTTTTAGGTAGCTCTATCAGTTTGCTGTCAACCATTGGGCATTGGTTTTTTTCTTCTTCCAAATAGTCGTTAAAATGTTAGAAGGACTTGGATTTGATAACTCATTTCTCAATCATAATAGAGAAGAATATAAGAGGTGAACTTCCTATGAGAGTCTTTGGCCATAGATGTCATCTAGGCCAATTGAAGTGAGATACAGGAAATATAAGCCTATATTTAGTGTCACTTCATCTTTTTTGTCCTAACTAAATAGTTTTGTGTACTCCATACCTCAAGAAGTTATTTCAATGTAGGCACCTTTTTGGTTGCTTGGTTTGAAAGATTATCTTGCTCATATATTAACTGGCTAGAACTATGCCATTTCTCTCTTCTTTGTAACTAATGAATATTAGCAGGTGAAATTGCTCTGTTGGCTGATGTCTGTTCTTTTCTCAGGTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGAGAAGAACGTTTGGCTCAGGTATTGTTTGAAGCTCATTAAAATTTCTAGGGAAAAGTTGGCTCTGACACTTGATGGAGTGCTCTACTCTACTCCATGTTTTATGGTTTTAAGAAACGTTTCATGCAATTATGGGATTTTATGTCCTTTTAAATAACTGCATAGGATTTTTTCTCATCTTTTCTGTTTCAAATTTCAGGGACCAGGAGGAGAGAAGCCAGTACAACCTGCAGCACCAGCCGCTGCTGCACCAGCCCAGCCAGCCCAGTAAGTTCATCTGCTATATTAATTGTAGTTTCTCCTAGGGCCTAGTTTGAACATCATTTGATGAGAATATGTCTTTTCAGGGGATCTAAGAAGTCGAAGAAATGAGCGTGATGAATTGTAAGGAGGGTTGGCGCTATGCCTACTTTTTGTCCTTGTTAGTATGGCAGTTTAGTATGTTTGATCCCTTTGCCCTTTTTGGCCTTTTAACTTTAAAAGACAATGTTACTTGTACTGAATTTGAAAGCTGGTTTAAATTTTTGATACGTTGATCCTTTTATATGTTT</genome_strand>
        <mrna_strand>CATTATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGAGAAGAACGTTTGGCTCAG..................................................................................................................................................................................GGACCAGGAGGAGAGAAGCCAGTACAACCTGCAGCACCAGCCGCTGCTGCACCAGCCCAGCCAGCCCA................................................................................GGGATCTAAGAAGTCGAAGAAATGAGCGTGATGAATTGTAAGGAGGGTTGGCGCTATGCCTACTTTTTGTCCTTGTTAGTATGGCAGTTTAGTATGTTTGATCCCTTTGCCCTTTTTGGCCTTTTAACTTTAAAAGACAATGTTACTTGTACTGAATTTGAAAGCTGGTTTAAATTTTTGATACGTTGATCCTTTTATATGTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E720735" ref_strand="+" ref_description="SGN-E720735 [FC11CG10]">
      <seq>gggcgattggcggccaatcggccgaattgctccttcgttcgcagcttcacaaaatcgaaaatggtttcgttgaagctccagaagcggctcgccgctagtgtcctcaagtgtggaagaggcaaagtttggcttgatcctaatgaaggcaatgaaatctccatggccaattcccgtcaaaacatcaggaaattggttaaggatggtttcatcatcaggaaaccaaccaaaattcactcgagatctcgtgctcgccgaatgaaggaggccaagaggaaaggccgtcactctggatatggtaagcgcaaaggtaccagggaggctagactgcctaccaaggtgctttggatgaggagattgagagtcctcaggcgtttgcttcgcaagtatagggaatcaaagaagattgacaaacacatgtatcatgacatgtacatgaaggtgaagggtaatgttttcaagaacaagcgtgtgctgatggaaaatatccacaagacaaaggctgagaaggctagagagaaaaccttgtccgaccaatttgaggctaggagggcaaagaacaaggcaagcagagaaagaaagtttgcaaggagagaagaacgtttggctcagggaccaggaggagagaagccagtacaacctgcagcaccagccgctgctgcaccagcccagccagcccagggatctaagaagtcgaagaaatgagcgtgatgaattgtaaggagggttggcgctatgcctactttttgtccttgttagtatggcagtttagtatgtttgatccctttgccctttttggccttttaactttaaaagacaatgttacttgtactgaatttgaaagctggtttaaatttttgatacgttgatccttttatatgtt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="65275" stop="61914"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64975" g_stop="64829" g_length="147"/>
          <reference_exon_boundary r_type="cDNA" r_start="26" r_stop="172" r_length="147" r_score="0.993"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64828" i_stop="63671" i_length="1158">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.955" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63670" g_stop="63548" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="173" r_stop="295" r_length="123" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63547" i_stop="63057" i_length="491">
            <donor d_prob="0.909" d_score="1.00"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="63056" g_stop="62743" g_length="314"/>
          <reference_exon_boundary r_type="cDNA" r_start="296" r_stop="609" r_length="314" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="62742" i_stop="62565" i_length="178">
            <donor d_prob="0.513" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="62564" g_stop="62497" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="610" r_stop="677" r_length="68" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="62496" i_stop="62417" i_length="80">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.924" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="62416" g_stop="62214" g_length="203"/>
          <reference_exon_boundary r_type="cDNA" r_start="678" r_stop="880" r_length="203" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E720735" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>855</cumulative_length_of_scored_exons>
        <coverage percentage="0.972" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E720735" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64975" e_stop="64829"/>
          <exon e_start="63670" e_stop="63548"/>
          <exon e_start="63056" e_stop="62743"/>
          <exon e_start="62564" e_stop="62497"/>
          <exon e_start="62416" e_stop="62214"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTTCTCCTTCGTTCGCAGCTTCACAAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCCGTATGTTTCTGTTTTCTGTTTGTTATCAATATCTATTTACGTTTATGCTATCTCTTTTAATCTCTTGTTTGTATGTTATGGCTTCTGATTGTGAAAGATCTATAGTAGGTTTTGATCAGTTTAGCTCCAACGATGCTTAGGTTATGTTACTTTATCGTTTCGCCGTCTTTTCTTGTGTGGAGTGTTTAATTTTGGAATTTGATCAACCGTAGTGTTGTTTTAACCACATATACTCTGATGTCGACCAGTTCAGATCCATAGAAGCATTGATTATTTGTGTTGAGGTTTTAGGTTTGGATTTTGATCAAACATTACAATGTTTCAACTGAATATACTGTTGAGGTATATTTTTGTCGTAGAGTTTGATCAGTTAAGCTCCAGTGTACCATAGATTAATTTACTGTTACTATCAATTTGCCTTTTGTTAGAGTTGCTGTTTTGAATTTGATCAGTATACTCCTTATGCATTGTTCACAAGATTAGCAGCATACTAATGTTTTTTTATTTATGTCTACTGTGTCAGCTTAGAGTGATATTTTTTAGGTTTTTGCATTGAAAACATATTTGTTTTTGGTAAACATGATTAACAAGGATGGTTGTTCTAGTGTTAAATGGATGCGAATAAACAATTATGCTGATTTTTTGGAAAACTGAAGATGTAGTGGATTGAAATTATTGGCAGATGTGGATAGGTTATGTGACAAGTTATATTTGCTGAAGTTTTTGAGTCGTGAGATTGAAATGTAATTGAGCTGTATATGTTCATTACAACACTGTCATTGTAATTTAATCAGTAATGATGATAGGTTACTAAACAGTGGGATGAATTAACTGCAATTATCTTTGTTATTGGTAGATGTCAATATGGAAAGATACCTATTTTGTGGGATTTCATTGGGTATGTTGTTGTATTGGCAGATATTTATTTGGTGTTGCTGCTTTGCGTTATTTGCCTCTTAATCTGATGTTTAGATGACAAAGTGATATTAATGTTTACTCAATCTAGATAACTAGAACATGTTTGCTGGAACAAGCTTATTGGTTGAGCTTGTGCAAGCCAGTTGCAATCCTTGTAGCTCTCCCTATGTCATTGTGCCAACTATTTTTTGTCATATTTCTATGAACTGCCCGTAATCCCTTCCTTTCCACTTAATACAGGTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATGGTACATCCTTGTCTTGACTGTGATTGCAGAAACTCATTTTTCATGCCCTAATTCAGTTTTTAGGTAGCTCTATCAGTTTGCTGTCAACCATTGGGCATTGGTTTTTTTCTTCTTCCAAATAGTCGTTAAAATGTTAGAAGGACTTGGATTTGATAACTCATTTCTCAATCATAATAGAGAAGAATATAAGAGGTGAACTTCCTATGAGAGTCTTTGGCCATAGATGTCATCTAGGCCAATTGAAGTGAGATACAGGAAATATAAGCCTATATTTAGTGTCACTTCATCTTTTTTGTCCTAACTAAATAGTTTTGTGTACTCCATACCTCAAGAAGTTATTTCAATGTAGGCACCTTTTTGGTTGCTTGGTTTGAAAGATTATCTTGCTCATATATTAACTGGCTAGAACTATGCCATTTCTCTCTTCTTTGTAACTAATGAATATTAGCAGGTGAAATTGCTCTGTTGGCTGATGTCTGTTCTTTTCTCAGGTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGAGAAGAACGTTTGGCTCAGGTATTGTTTGAAGCTCATTAAAATTTCTAGGGAAAAGTTGGCTCTGACACTTGATGGAGTGCTCTACTCTACTCCATGTTTTATGGTTTTAAGAAACGTTTCATGCAATTATGGGATTTTATGTCCTTTTAAATAACTGCATAGGATTTTTTCTCATCTTTTCTGTTTCAAATTTCAGGGACCAGGAGGAGAGAAGCCAGTACAACCTGCAGCACCAGCCGCTGCTGCACCAGCCCAGCCAGCCCAGTAAGTTCATCTGCTATATTAATTGTAGTTTCTCCTAGGGCCTAGTTTGAACATCATTTGATGAGAATATGTCTTTTCAGGGGATCTAAGAAGTCGAAGAAATGAGCGTGATGAATTGTAAGGAGGGTTGGCGCTATGCCTACTTTTTGTCCTTGTTAGTATGGCAGTTTAGTATGTTTGATCCCTTTGCCCTTTTTGGCCTTTTAACTTTAAAAGACAATGTTACTTGTACTGAATTTGAAAGCTGGTTTAAATTTTTGATACGTTGATCCTTTTATATGTT</genome_strand>
        <mrna_strand>ATTGCTCCTTCGTTCGCAGCTTCACAAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGAGAAGAACGTTTGGCTCAG..................................................................................................................................................................................GGACCAGGAGGAGAGAAGCCAGTACAACCTGCAGCACCAGCCGCTGCTGCACCAGCCCAGCCAGCCCA................................................................................GGGATCTAAGAAGTCGAAGAAATGAGCGTGATGAATTGTAAGGAGGGTTGGCGCTATGCCTACTTTTTGTCCTTGTTAGTATGGCAGTTTAGTATGTTTGATCCCTTTGCCCTTTTTGGCCTTTTAACTTTAAAAGACAATGTTACTTGTACTGAATTTGAAAGCTGGTTTAAATTTTTGATACGTTGATCCTTTTATATGTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E341399" ref_strand="+" ref_description="SGN-E341399 [cTOE-23-F5]">
      <seq>cacatgtatcatgacatgtacatgaaggtgaagggtaatgttttcattaacaagcgtgtgctgatggaaaatatccacaagacaaaggctgagaaggctagagagaaaaccttgtccgaccaatttgaggctaggagggcaaagaacaaggcaagcagagaaagaaagtttgcaaggagagaagaacgtttggctcatggaccaggaggagagaagccagtacaacctgcagcaccagccgctgctgcaccagcccagccagcccagggatctaagaagtcgaagaaatgagcgtgatgaattgtaaggagggttggcgctatgcctactttttgtccttgttagtatggcagtttagtatgtttgatccctttgccctttttggccttttaactttaaaagacaatgttacttgtactgaatttgaaagctggtttaaatttttgatacgttgatccttttatat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="63240" stop="61917"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62940" g_stop="62743" g_length="198"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="198" r_length="198" r_score="0.985"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="62742" i_stop="62565" i_length="178">
            <donor d_prob="0.513" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="62564" g_stop="62497" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="199" r_stop="266" r_length="68" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="62496" i_stop="62417" i_length="80">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.924" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="62416" g_stop="62217" g_length="200"/>
          <reference_exon_boundary r_type="cDNA" r_start="267" r_stop="466" r_length="200" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E341399" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>466</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E341399" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="62940" e_stop="62743"/>
          <exon e_start="62564" e_stop="62497"/>
          <exon e_start="62416" e_stop="62217"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGAGAAGAACGTTTGGCTCAGGTATTGTTTGAAGCTCATTAAAATTTCTAGGGAAAAGTTGGCTCTGACACTTGATGGAGTGCTCTACTCTACTCCATGTTTTATGGTTTTAAGAAACGTTTCATGCAATTATGGGATTTTATGTCCTTTTAAATAACTGCATAGGATTTTTTCTCATCTTTTCTGTTTCAAATTTCAGGGACCAGGAGGAGAGAAGCCAGTACAACCTGCAGCACCAGCCGCTGCTGCACCAGCCCAGCCAGCCCAGTAAGTTCATCTGCTATATTAATTGTAGTTTCTCCTAGGGCCTAGTTTGAACATCATTTGATGAGAATATGTCTTTTCAGGGGATCTAAGAAGTCGAAGAAATGAGCGTGATGAATTGTAAGGAGGGTTGGCGCTATGCCTACTTTTTGTCCTTGTTAGTATGGCAGTTTAGTATGTTTGATCCCTTTGCCCTTTTTGGCCTTTTAACTTTAAAAGACAATGTTACTTGTACTGAATTTGAAAGCTGGTTTAAATTTTTGATACGTTGATCCTTTTATAT</genome_strand>
        <mrna_strand>CACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCATTAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGAGAAGAACGTTTGGCTCAT..................................................................................................................................................................................GGACCAGGAGGAGAGAAGCCAGTACAACCTGCAGCACCAGCCGCTGCTGCACCAGCCCAGCCAGCCCA................................................................................GGGATCTAAGAAGTCGAAGAAATGAGCGTGATGAATTGTAAGGAGGGTTGGCGCTATGCCTACTTTTTGTCCTTGTTAGTATGGCAGTTTAGTATGTTTGATCCCTTTGCCCTTTTTGGCCTTTTAACTTTAAAAGACAATGTTACTTGTACTGAATTTGAAAGCTGGTTTAAATTTTTGATACGTTGATCCTTTTATAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E719519" ref_strand="+" ref_description="SGN-E719519 [FC08AD09]">
      <seq>gctccttcgttcgcagcttcacaaaatcgaaaatggtttcgttgaagctccagaagcggctcgccgctagtgtcctcaagtgtggaagaggcaaagtttggcttgatcctaatgaaggcaatgaaatctccatggccaattcccgtcaaaacatcaggaaattggttaaggatggtttcatcatcaggaaaccaaccaaaattcactcgagatctcgtgctcgccgaatgaaggaggccaagaggaaaggccgtcactctggatatggtaagcgcaaaggtaccagggaggctagactgcctaccaaggtgctttggatgaggagattgagagtcctcaggcgtttgcttcgcaagtatagggaatcaaagaagattgacaaacacatgtatcatgacatgtacatgaaggtgaagggtaatgttttcaagaacaagcgtgtgctgatggaaaatatccacaagacaaaggctgagaaggctagagagaaaaccttgtccgaccaatttgaggctaggagggcaaagaacaaggcaagcagagaaagaaagtttgcaaggagagaagaacgtttggctcagggaccaggaggagagaagccagtacaacctgcagcaccagccgctgctgcaccagcccagccagcccagggatctaagaagtcgaagaaatgagcgtgatgaattgtaaggagggttggcgctatgcctactttttgtccttgttagtatggcagtttagtatgtttgatccctttgccctttttggccttttaactttaaaagacaatgttacttgtactgaatttgaaagctggtttaaatttttgatacgttgatccttta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="65271" stop="61922"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64972" g_stop="64829" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="144" r_length="144" r_score="0.993"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64828" i_stop="63671" i_length="1158">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.955" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63670" g_stop="63548" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="145" r_stop="267" r_length="123" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63547" i_stop="63057" i_length="491">
            <donor d_prob="0.909" d_score="1.00"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="63056" g_stop="62743" g_length="314"/>
          <reference_exon_boundary r_type="cDNA" r_start="268" r_stop="581" r_length="314" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="62742" i_stop="62565" i_length="178">
            <donor d_prob="0.513" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="62564" g_stop="62497" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="582" r_stop="649" r_length="68" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="62496" i_stop="62417" i_length="80">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.924" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="62416" g_stop="62221" g_length="196"/>
          <reference_exon_boundary r_type="cDNA" r_start="650" r_stop="845" r_length="196" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E719519" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>845</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E719519" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64972" e_stop="64829"/>
          <exon e_start="63670" e_stop="63548"/>
          <exon e_start="63056" e_stop="62743"/>
          <exon e_start="62564" e_stop="62497"/>
          <exon e_start="62416" e_stop="62221"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTCCTTCGTTCGCAGCTTCACAAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCCGTATGTTTCTGTTTTCTGTTTGTTATCAATATCTATTTACGTTTATGCTATCTCTTTTAATCTCTTGTTTGTATGTTATGGCTTCTGATTGTGAAAGATCTATAGTAGGTTTTGATCAGTTTAGCTCCAACGATGCTTAGGTTATGTTACTTTATCGTTTCGCCGTCTTTTCTTGTGTGGAGTGTTTAATTTTGGAATTTGATCAACCGTAGTGTTGTTTTAACCACATATACTCTGATGTCGACCAGTTCAGATCCATAGAAGCATTGATTATTTGTGTTGAGGTTTTAGGTTTGGATTTTGATCAAACATTACAATGTTTCAACTGAATATACTGTTGAGGTATATTTTTGTCGTAGAGTTTGATCAGTTAAGCTCCAGTGTACCATAGATTAATTTACTGTTACTATCAATTTGCCTTTTGTTAGAGTTGCTGTTTTGAATTTGATCAGTATACTCCTTATGCATTGTTCACAAGATTAGCAGCATACTAATGTTTTTTTATTTATGTCTACTGTGTCAGCTTAGAGTGATATTTTTTAGGTTTTTGCATTGAAAACATATTTGTTTTTGGTAAACATGATTAACAAGGATGGTTGTTCTAGTGTTAAATGGATGCGAATAAACAATTATGCTGATTTTTTGGAAAACTGAAGATGTAGTGGATTGAAATTATTGGCAGATGTGGATAGGTTATGTGACAAGTTATATTTGCTGAAGTTTTTGAGTCGTGAGATTGAAATGTAATTGAGCTGTATATGTTCATTACAACACTGTCATTGTAATTTAATCAGTAATGATGATAGGTTACTAAACAGTGGGATGAATTAACTGCAATTATCTTTGTTATTGGTAGATGTCAATATGGAAAGATACCTATTTTGTGGGATTTCATTGGGTATGTTGTTGTATTGGCAGATATTTATTTGGTGTTGCTGCTTTGCGTTATTTGCCTCTTAATCTGATGTTTAGATGACAAAGTGATATTAATGTTTACTCAATCTAGATAACTAGAACATGTTTGCTGGAACAAGCTTATTGGTTGAGCTTGTGCAAGCCAGTTGCAATCCTTGTAGCTCTCCCTATGTCATTGTGCCAACTATTTTTTGTCATATTTCTATGAACTGCCCGTAATCCCTTCCTTTCCACTTAATACAGGTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATGGTACATCCTTGTCTTGACTGTGATTGCAGAAACTCATTTTTCATGCCCTAATTCAGTTTTTAGGTAGCTCTATCAGTTTGCTGTCAACCATTGGGCATTGGTTTTTTTCTTCTTCCAAATAGTCGTTAAAATGTTAGAAGGACTTGGATTTGATAACTCATTTCTCAATCATAATAGAGAAGAATATAAGAGGTGAACTTCCTATGAGAGTCTTTGGCCATAGATGTCATCTAGGCCAATTGAAGTGAGATACAGGAAATATAAGCCTATATTTAGTGTCACTTCATCTTTTTTGTCCTAACTAAATAGTTTTGTGTACTCCATACCTCAAGAAGTTATTTCAATGTAGGCACCTTTTTGGTTGCTTGGTTTGAAAGATTATCTTGCTCATATATTAACTGGCTAGAACTATGCCATTTCTCTCTTCTTTGTAACTAATGAATATTAGCAGGTGAAATTGCTCTGTTGGCTGATGTCTGTTCTTTTCTCAGGTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGAGAAGAACGTTTGGCTCAGGTATTGTTTGAAGCTCATTAAAATTTCTAGGGAAAAGTTGGCTCTGACACTTGATGGAGTGCTCTACTCTACTCCATGTTTTATGGTTTTAAGAAACGTTTCATGCAATTATGGGATTTTATGTCCTTTTAAATAACTGCATAGGATTTTTTCTCATCTTTTCTGTTTCAAATTTCAGGGACCAGGAGGAGAGAAGCCAGTACAACCTGCAGCACCAGCCGCTGCTGCACCAGCCCAGCCAGCCCAGTAAGTTCATCTGCTATATTAATTGTAGTTTCTCCTAGGGCCTAGTTTGAACATCATTTGATGAGAATATGTCTTTTCAGGGGATCTAAGAAGTCGAAGAAATGAGCGTGATGAATTGTAAGGAGGGTTGGCGCTATGCCTACTTTTTGTCCTTGTTAGTATGGCAGTTTAGTATGTTTGATCCCTTTGCCCTTTTTGGCCTTTTAACTTTAAAAGACAATGTTACTTGTACTGAATTTGAAAGCTGGTTTAAATTTTTGATACGTTGATCCTTTT</genome_strand>
        <mrna_strand>GCTCCTTCGTTCGCAGCTTCACAAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGAGAAGAACGTTTGGCTCAG..................................................................................................................................................................................GGACCAGGAGGAGAGAAGCCAGTACAACCTGCAGCACCAGCCGCTGCTGCACCAGCCCAGCCAGCCCA................................................................................GGGATCTAAGAAGTCGAAGAAATGAGCGTGATGAATTGTAAGGAGGGTTGGCGCTATGCCTACTTTTTGTCCTTGTTAGTATGGCAGTTTAGTATGTTTGATCCCTTTGCCCTTTTTGGCCTTTTAACTTTAAAAGACAATGTTACTTGTACTGAATTTGAAAGCTGGTTTAAATTTTTGATACGTTGATCCTTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E715785" ref_strand="+" ref_description="SGN-E715785 [FB15BA11]">
      <seq>cataacatcaggaaattggttaaggatggtttcatcatcaggaaaccaaccaaaattcactcgagatctcgtgctcgccgaatgaaggaggccaagaggaaaggccgtcactctggatatggtaagcgcaaaggtaccagggaggctagactgcctaccaaggtgctttggatgaggagattgagagtcctcaggcgtttgcttcgcaagtatagggaatcaaagaagattgacaaacacatgtatcatgacatgtacatgaaggtgaagggtaatgttttcaagaacaagcgtgtgctgatggaaaatatccacaagacaaaggctgagaaggctagagagaaaaccttgtccgaccaatttgaggctaggagggcaaagaacaaggcaagcagagaaagaaagtttgcaaggagagaagaacgtttggctcagggaccaggaggagagaagccagtacaacctgcagcaccagccgctgctgcaccagcccagccagcccagggatctaagaagtcgaagaaatgagcgtgatgaattgtaaggagggttggcgctatgcctactttttgtccttgttagtatggcagtttagtatgtttgatccctttgccctttttggccttttaactttaaaagacaatgttacttgtactgaatttgaaagctggtttaaatttttgatacgttgatccttttaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="63968" stop="61918"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="63668" g_stop="63548" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="121" r_length="121" r_score="0.992"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="63547" i_stop="63057" i_length="491">
            <donor d_prob="0.909" d_score="1.00"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63056" g_stop="62743" g_length="314"/>
          <reference_exon_boundary r_type="cDNA" r_start="122" r_stop="435" r_length="314" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="62742" i_stop="62565" i_length="178">
            <donor d_prob="0.513" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="62564" g_stop="62497" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="436" r_stop="503" r_length="68" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="62496" i_stop="62417" i_length="80">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.924" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="62416" g_stop="62221" g_length="196"/>
          <reference_exon_boundary r_type="cDNA" r_start="504" r_stop="699" r_length="196" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="700" polyA_stop="717"/>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E715785" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>699</cumulative_length_of_scored_exons>
        <coverage percentage="0.975" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E715785" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="63668" e_stop="63548"/>
          <exon e_start="63056" e_stop="62743"/>
          <exon e_start="62564" e_stop="62497"/>
          <exon e_start="62416" e_stop="62221"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATGGTACATCCTTGTCTTGACTGTGATTGCAGAAACTCATTTTTCATGCCCTAATTCAGTTTTTAGGTAGCTCTATCAGTTTGCTGTCAACCATTGGGCATTGGTTTTTTTCTTCTTCCAAATAGTCGTTAAAATGTTAGAAGGACTTGGATTTGATAACTCATTTCTCAATCATAATAGAGAAGAATATAAGAGGTGAACTTCCTATGAGAGTCTTTGGCCATAGATGTCATCTAGGCCAATTGAAGTGAGATACAGGAAATATAAGCCTATATTTAGTGTCACTTCATCTTTTTTGTCCTAACTAAATAGTTTTGTGTACTCCATACCTCAAGAAGTTATTTCAATGTAGGCACCTTTTTGGTTGCTTGGTTTGAAAGATTATCTTGCTCATATATTAACTGGCTAGAACTATGCCATTTCTCTCTTCTTTGTAACTAATGAATATTAGCAGGTGAAATTGCTCTGTTGGCTGATGTCTGTTCTTTTCTCAGGTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGAGAAGAACGTTTGGCTCAGGTATTGTTTGAAGCTCATTAAAATTTCTAGGGAAAAGTTGGCTCTGACACTTGATGGAGTGCTCTACTCTACTCCATGTTTTATGGTTTTAAGAAACGTTTCATGCAATTATGGGATTTTATGTCCTTTTAAATAACTGCATAGGATTTTTTCTCATCTTTTCTGTTTCAAATTTCAGGGACCAGGAGGAGAGAAGCCAGTACAACCTGCAGCACCAGCCGCTGCTGCACCAGCCCAGCCAGCCCAGTAAGTTCATCTGCTATATTAATTGTAGTTTCTCCTAGGGCCTAGTTTGAACATCATTTGATGAGAATATGTCTTTTCAGGGGATCTAAGAAGTCGAAGAAATGAGCGTGATGAATTGTAAGGAGGGTTGGCGCTATGCCTACTTTTTGTCCTTGTTAGTATGGCAGTTTAGTATGTTTGATCCCTTTGCCCTTTTTGGCCTTTTAACTTTAAAAGACAATGTTACTTGTACTGAATTTGAAAGCTGGTTTAAATTTTTGATACGTTGATCCTTTT</genome_strand>
        <mrna_strand>CATAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGAGAAGAACGTTTGGCTCAG..................................................................................................................................................................................GGACCAGGAGGAGAGAAGCCAGTACAACCTGCAGCACCAGCCGCTGCTGCACCAGCCCAGCCAGCCCA................................................................................GGGATCTAAGAAGTCGAAGAAATGAGCGTGATGAATTGTAAGGAGGGTTGGCGCTATGCCTACTTTTTGTCCTTGTTAGTATGGCAGTTTAGTATGTTTGATCCCTTTGCCCTTTTTGGCCTTTTAACTTTAAAAGACAATGTTACTTGTACTGAATTTGAAAGCTGGTTTAAATTTTTGATACGTTGATCCTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E451398" ref_strand="+" ref_description="SGN-E451398 [cSTS-12-L1]">
      <seq>caggcgtttgcttcgcaagtatagggaatcaaagaagattgacaaacacatgtatcatgacatgtacatgaaggtgaagggtaatgttttcaagaacaagcgtgtgctgatggaaaatatccacaagacaaaggctgagaaagctagagagaagaccttgtccgaccaatttgaggctaggagggcaaagaacaaggcaagcagagaaagaaagtttgcaaggagggaagaacgtttggctcagggaccaggaggagagaagccagtacaacaacctgcagcaccagccgctgccgcaccagcccagccagctcagggatctaagaagtcgaagaaatgagcatgatgaattgtaaggagggttggcgctatgcctactttttgtccttgttagtatggcagtttagtatgtttgatcccttccctttttggccttttaactttaaaagacaatgttacttgtatgaatttgaaagctggtttaaatttttgatacgttgatccttttaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="63286" stop="61918"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62986" g_stop="62743" g_length="244"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="244" r_length="244" r_score="0.988"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="62742" i_stop="62565" i_length="178">
            <donor d_prob="0.513" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.87"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="62564" g_stop="62497" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="245" r_stop="315" r_length="71" r_score="0.882"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="62496" i_stop="62417" i_length="80">
            <donor d_prob="1.000" d_score="0.83"/>
            <acceptor a_prob="0.924" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="62416" g_stop="62221" g_length="196"/>
          <reference_exon_boundary r_type="cDNA" r_start="316" r_stop="508" r_length="193" r_score="0.980"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="509" polyA_stop="523"/>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E451398" ref_strand="+">
        <total_alignment_score>0.970</total_alignment_score>
        <cumulative_length_of_scored_exons>508</cumulative_length_of_scored_exons>
        <coverage percentage="0.971" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E451398" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="62986" e_stop="62743"/>
          <exon e_start="62564" e_stop="62497"/>
          <exon e_start="62416" e_stop="62221"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGAGAAGAACGTTTGGCTCAGGTATTGTTTGAAGCTCATTAAAATTTCTAGGGAAAAGTTGGCTCTGACACTTGATGGAGTGCTCTACTCTACTCCATGTTTTATGGTTTTAAGAAACGTTTCATGCAATTATGGGATTTTATGTCCTTTTAAATAACTGCATAGGATTTTTTCTCATCTTTTCTGTTTCAAATTTCAGGGACCAGGAGGAGAGAAGCCAGT---ACAACCTGCAGCACCAGCCGCTGCTGCACCAGCCCAGCCAGCCCAGTAAGTTCATCTGCTATATTAATTGTAGTTTCTCCTAGGGCCTAGTTTGAACATCATTTGATGAGAATATGTCTTTTCAGGGGATCTAAGAAGTCGAAGAAATGAGCGTGATGAATTGTAAGGAGGGTTGGCGCTATGCCTACTTTTTGTCCTTGTTAGTATGGCAGTTTAGTATGTTTGATCCCTTTGCCCTTTTTGGCCTTTTAACTTTAAAAGACAATGTTACTTGTACTGAATTTGAAAGCTGGTTTAAATTTTTGATACGTTGATCCTTTT</genome_strand>
        <mrna_strand>CAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAAGCTAGAGAGAAGACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGGGAAGAACGTTTGGCTCAG..................................................................................................................................................................................GGACCAGGAGGAGAGAAGCCAGTACAACAACCTGCAGCACCAGCCGCTGCCGCACCAGCCCAGCCAGCTCA................................................................................GGGATCTAAGAAGTCGAAGAAATGAGCATGATGAATTGTAAGGAGGGTTGGCGCTATGCCTACTTTTTGTCCTTGTTAGTATGGCAGTTTAGTATGTTTGATCCC-TT-CCCTTTTTGGCCTTTTAACTTTAAAAGACAATGTTACTTGTA-TGAATTTGAAAGCTGGTTTAAATTTTTGATACGTTGATCCTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E451505" ref_strand="+" ref_description="SGN-E451505 [cSTS-12-P6]">
      <seq>caggcgtttgcttcgcaagtatagggaatcaaagaagattgacaaacacatgtatcatgacatgtacatgaaggtgaagggtaatgttttcaagaacaagcgtgtgctgatggaaaatatccacaagacaaaggctgagaaagctagagagaagaccttgtccgaccaatttgaggctaggagggcaaagaacaaggcaagcagagaaagaaagtttgcaaggagggaagaacgtttggctcagggaccaggaggagagaagccagtacaacaacctgcagcaccagccgctgccgcaccagcccagccagctcagggatctaagaagtcgaagaaatgagcatgatgaattgtaaggagggttggcgctatgcctactttttgtccttgttagtatggcagtttagtatgtttgatcccttccctttttggccttttaactttaaaagacaatgttacttgtatgaatttgaaagctggtttaaatttttgatacgttgatccttttaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="63286" stop="61918"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62986" g_stop="62743" g_length="244"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="244" r_length="244" r_score="0.988"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="62742" i_stop="62565" i_length="178">
            <donor d_prob="0.513" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.87"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="62564" g_stop="62497" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="245" r_stop="315" r_length="71" r_score="0.882"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="62496" i_stop="62417" i_length="80">
            <donor d_prob="1.000" d_score="0.83"/>
            <acceptor a_prob="0.924" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="62416" g_stop="62221" g_length="196"/>
          <reference_exon_boundary r_type="cDNA" r_start="316" r_stop="508" r_length="193" r_score="0.980"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="509" polyA_stop="523"/>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E451505" ref_strand="+">
        <total_alignment_score>0.970</total_alignment_score>
        <cumulative_length_of_scored_exons>508</cumulative_length_of_scored_exons>
        <coverage percentage="0.971" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E451505" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="62986" e_stop="62743"/>
          <exon e_start="62564" e_stop="62497"/>
          <exon e_start="62416" e_stop="62221"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGAGAAGAACGTTTGGCTCAGGTATTGTTTGAAGCTCATTAAAATTTCTAGGGAAAAGTTGGCTCTGACACTTGATGGAGTGCTCTACTCTACTCCATGTTTTATGGTTTTAAGAAACGTTTCATGCAATTATGGGATTTTATGTCCTTTTAAATAACTGCATAGGATTTTTTCTCATCTTTTCTGTTTCAAATTTCAGGGACCAGGAGGAGAGAAGCCAGT---ACAACCTGCAGCACCAGCCGCTGCTGCACCAGCCCAGCCAGCCCAGTAAGTTCATCTGCTATATTAATTGTAGTTTCTCCTAGGGCCTAGTTTGAACATCATTTGATGAGAATATGTCTTTTCAGGGGATCTAAGAAGTCGAAGAAATGAGCGTGATGAATTGTAAGGAGGGTTGGCGCTATGCCTACTTTTTGTCCTTGTTAGTATGGCAGTTTAGTATGTTTGATCCCTTTGCCCTTTTTGGCCTTTTAACTTTAAAAGACAATGTTACTTGTACTGAATTTGAAAGCTGGTTTAAATTTTTGATACGTTGATCCTTTT</genome_strand>
        <mrna_strand>CAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAAGCTAGAGAGAAGACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGGGAAGAACGTTTGGCTCAG..................................................................................................................................................................................GGACCAGGAGGAGAGAAGCCAGTACAACAACCTGCAGCACCAGCCGCTGCCGCACCAGCCCAGCCAGCTCA................................................................................GGGATCTAAGAAGTCGAAGAAATGAGCATGATGAATTGTAAGGAGGGTTGGCGCTATGCCTACTTTTTGTCCTTGTTAGTATGGCAGTTTAGTATGTTTGATCCC-TT-CCCTTTTTGGCCTTTTAACTTTAAAAGACAATGTTACTTGTA-TGAATTTGAAAGCTGGTTTAAATTTTTGATACGTTGATCCTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E595462" ref_strand="+" ref_description="SGN-E595462 [38736]">
      <seq>gtggaagggtaatgttttcaaggaacaagcgtgtgctgatggaaaatatccacaatgacaaaggctgaggaaggctagagagaagaccttgttccgaccaatttgaggctaggagggcgaagaacaaggcaagctagagaaagaaagtttgcaaggagggaagaacgtttggctcagggaccaggaggagagaagccagtactacaacctgcagcaccagctgctgccgcaccagccctagccagctcagggatctaagaagtcgaagaaatgagcaagatgaattgtaaggagggttggcgctatgcctactttttgtccttgttagtatggcagtttagtatgtttgatcccttccctttttggccttttaactttaaaagacaatgttacttgtatgaactttgaaagctggtttaaattctctgatcacgttgatcctttaaaaaaagataaaaaactg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="63213" stop="61918"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62914" g_stop="62743" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="177" r_length="177" r_score="0.913"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="62742" i_stop="62565" i_length="178">
            <donor d_prob="0.513" d_score="0.94"/>
            <acceptor a_prob="1.000" a_score="0.85"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="62564" g_stop="62497" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="178" r_stop="249" r_length="72" r_score="0.838"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="62496" i_stop="62417" i_length="80">
            <donor d_prob="1.000" d_score="0.76"/>
            <acceptor a_prob="0.924" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="62416" g_stop="62221" g_length="196"/>
          <reference_exon_boundary r_type="cDNA" r_start="250" r_stop="445" r_length="196" r_score="0.929"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E595462" ref_strand="+">
        <total_alignment_score>0.908</total_alignment_score>
        <cumulative_length_of_scored_exons>436</cumulative_length_of_scored_exons>
        <coverage percentage="0.942" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E595462" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="62914" e_stop="62743"/>
          <exon e_start="62564" e_stop="62497"/>
          <exon e_start="62416" e_stop="62221"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGTGAAGGGTAATGTTTTCAA-GAACAAGCGTGTGCTGATGGAAAATATCCACAA-GACAAAGGCTGA-GAAGGCTAGAGAGAAAACCTTG-TCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGC-AGAGAAAGAAAGTTTGCAAGGAGAGAAGAACGTTTGGCTCAGGTATTGTTTGAAGCTCATTAAAATTTCTAGGGAAAAGTTGGCTCTGACACTTGATGGAGTGCTCTACTCTACTCCATGTTTTATGGTTTTAAGAAACGTTTCATGCAATTATGGGATTTTATGTCCTTTTAAATAACTGCATAGGATTTTTTCTCATCTTTTCTGTTTCAAATTTCAGGGACCAGGAGGAGAGAAGCCAG---TACAACCTGCAGCACCAGCCGCTGCTGCACCAGCCC-AGCCAGCCCAGTAAGTTCATCTGCTATATTAATTGTAGTTTCTCCTAGGGCCTAGTTTGAACATCATTTGATGAGAATATGTCTTTTCAGGGGATCTAAGAAGTCGAAGAAATGAGCGTGATGAATTGTAAGGAGGGTTGGCGCTATGCCTACTTTTTGTCCTTGTTAGTATGGCAGTTTAGTATGTTTGATCCCTTTGCCCTTTTTGGCCTTTTAACTTTAAAAGACAATGTTACTTGTACTGAATTTGAAAGCTGGTTTAAATT-TTTGAT-ACGTTGATCCTTTT</genome_strand>
        <mrna_strand>GTGGAAGGGTAATGTTTTCAAGGAACAAGCGTGTGCTGATGGAAAATATCCACAATGACAAAGGCTGAGGAAGGCTAGAGAGAAGACCTTGTTCCGACCAATTTGAGGCTAGGAGGGCGAAGAACAAGGCAAGCTAGAGAAAGAAAGTTTGCAAGGAGGGAAGAACGTTTGGCTCAG..................................................................................................................................................................................GGACCAGGAGGAGAGAAGCCAGTACTACAACCTGCAGCACCAGCTGCTGCCGCACCAGCCCTAGCCAGCTCA................................................................................GGGATCTAAGAAGTCGAAGAAATGAGCAAGATGAATTGTAAGGAGGGTTGGCGCTATGCCTACTTTTTGTCCTTGTTAGTATGGCAGTTTAGTATGTTTGATCCC-TT-CCCTTTTTGGCCTTTTAACTTTAAAAGACAATGTTACTTGTATGAACTTTGAAAGCTGGTTTAAATTCTCTGATCACGTTGATCCTTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E597412" ref_strand="-" ref_description="SGN-E597412 [40915]">
      <seq>tttcaagaacaagcgtgtgctgatggaaaatatccacaagacaaaggctgagaaggctagagagaagaccttgtccgaccaatttgaggctaggagggcaaagaacaaggcaagcagagaaagaaagtttgcaaggagggaagaacgtttggctcagggaccaggaggagagaagccagtacaacaacctgcagcaccagctgctgccgcaccagcccagccagctcagggatctaagaagtcgaagaaatgagcaagatgaattgtaaggagggttggcgctatgcctactttttgtccttgttagtatggcagtttagtatgtttgatcccttccctttttggccttttaactttaaaagacaatgttacttgtatgaatttgaaagctggtttaaatttttgatacgttgatcctttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="63199" stop="61921"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62899" g_stop="62743" g_length="157"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="157" r_length="157" r_score="0.987"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="62742" i_stop="62565" i_length="178">
            <donor d_prob="0.513" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.85"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="62564" g_stop="62497" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="158" r_stop="228" r_length="71" r_score="0.868"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="62496" i_stop="62417" i_length="80">
            <donor d_prob="1.000" d_score="0.81"/>
            <acceptor a_prob="0.924" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="62416" g_stop="62221" g_length="196"/>
          <reference_exon_boundary r_type="cDNA" r_start="229" r_stop="421" r_length="193" r_score="0.974"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E597412" ref_strand="-">
        <total_alignment_score>0.962</total_alignment_score>
        <cumulative_length_of_scored_exons>421</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E597412" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="62899" e_stop="62743"/>
          <exon e_start="62564" e_stop="62497"/>
          <exon e_start="62416" e_stop="62221"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGAGAAGAACGTTTGGCTCAGGTATTGTTTGAAGCTCATTAAAATTTCTAGGGAAAAGTTGGCTCTGACACTTGATGGAGTGCTCTACTCTACTCCATGTTTTATGGTTTTAAGAAACGTTTCATGCAATTATGGGATTTTATGTCCTTTTAAATAACTGCATAGGATTTTTTCTCATCTTTTCTGTTTCAAATTTCAGGGACCAGGAGGAGAGAAGCCAGT---ACAACCTGCAGCACCAGCCGCTGCTGCACCAGCCCAGCCAGCCCAGTAAGTTCATCTGCTATATTAATTGTAGTTTCTCCTAGGGCCTAGTTTGAACATCATTTGATGAGAATATGTCTTTTCAGGGGATCTAAGAAGTCGAAGAAATGAGCGTGATGAATTGTAAGGAGGGTTGGCGCTATGCCTACTTTTTGTCCTTGTTAGTATGGCAGTTTAGTATGTTTGATCCCTTTGCCCTTTTTGGCCTTTTAACTTTAAAAGACAATGTTACTTGTACTGAATTTGAAAGCTGGTTTAAATTTTTGATACGTTGATCCTTTT</genome_strand>
        <mrna_strand>TTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAGACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGGGAAGAACGTTTGGCTCAG..................................................................................................................................................................................GGACCAGGAGGAGAGAAGCCAGTACAACAACCTGCAGCACCAGCTGCTGCCGCACCAGCCCAGCCAGCTCA................................................................................GGGATCTAAGAAGTCGAAGAAATGAGCAAGATGAATTGTAAGGAGGGTTGGCGCTATGCCTACTTTTTGTCCTTGTTAGTATGGCAGTTTAGTATGTTTGATCCC-TT-CCCTTTTTGGCCTTTTAACTTTAAAAGACAATGTTACTTGTA-TGAATTTGAAAGCTGGTTTAAATTTTTGATACGTTGATCCTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E586885" ref_strand="+" ref_description="SGN-E586885 [75721]">
      <seq>aagacaaaggctgagaaggctagagagaagaccttgtccgaccaatttgaggctaggagggcaaagaacaaggcaagcagagaaagaaagtttgcaaggagggaagaacgtttggctcaggaccaggaggagagaagccagtacaacaacctgcagcaccagccgctgccgctccagcccagccagctcagggatccaagaagtcgaagaaatgagcatgatgaatttttaggagggttggcgccatgcctactttttgtccttgttagtatggcagtttagtatgtttgatctcttccctttttggccttttaactttaaaagacgatgttacttgtatgaattggaaagctggtttaaatttttgatacgttgatccttttaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="63162" stop="61918"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62862" g_stop="62743" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="119" r_length="119" r_score="0.975"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="62742" i_stop="62565" i_length="178">
            <donor d_prob="0.513" d_score="0.96"/>
            <acceptor a_prob="1.000" a_score="0.87"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="62564" g_stop="62497" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="120" r_stop="190" r_length="71" r_score="0.868"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="62496" i_stop="62417" i_length="80">
            <donor d_prob="1.000" d_score="0.81"/>
            <acceptor a_prob="0.924" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="62416" g_stop="62221" g_length="196"/>
          <reference_exon_boundary r_type="cDNA" r_start="191" r_stop="383" r_length="193" r_score="0.944"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="384" polyA_stop="407"/>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E586885" ref_strand="+">
        <total_alignment_score>0.940</total_alignment_score>
        <cumulative_length_of_scored_exons>384</cumulative_length_of_scored_exons>
        <coverage percentage="0.943" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E586885" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="62862" e_stop="62743"/>
          <exon e_start="62564" e_stop="62497"/>
          <exon e_start="62416" e_stop="62221"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGAGAAGAACGTTTGGCTCAGGTATTGTTTGAAGCTCATTAAAATTTCTAGGGAAAAGTTGGCTCTGACACTTGATGGAGTGCTCTACTCTACTCCATGTTTTATGGTTTTAAGAAACGTTTCATGCAATTATGGGATTTTATGTCCTTTTAAATAACTGCATAGGATTTTTTCTCATCTTTTCTGTTTCAAATTTCAGGGACCAGGAGGAGAGAAGCCAGT---ACAACCTGCAGCACCAGCCGCTGCTGCACCAGCCCAGCCAGCCCAGTAAGTTCATCTGCTATATTAATTGTAGTTTCTCCTAGGGCCTAGTTTGAACATCATTTGATGAGAATATGTCTTTTCAGGGGATCTAAGAAGTCGAAGAAATGAGCGTGATGAATTGTAAGGAGGGTTGGCGCTATGCCTACTTTTTGTCCTTGTTAGTATGGCAGTTTAGTATGTTTGATCCCTTTGCCCTTTTTGGCCTTTTAACTTTAAAAGACAATGTTACTTGTACTGAATTTGAAAGCTGGTTTAAATTTTTGATACGTTGATCCTTTT</genome_strand>
        <mrna_strand>AAGACAAAGGCTGAGAAGGCTAGAGAGAAGACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGGGAAGAACGTTTGGCTCA-..................................................................................................................................................................................GGACCAGGAGGAGAGAAGCCAGTACAACAACCTGCAGCACCAGCCGCTGCCGCTCCAGCCCAGCCAGCTCA................................................................................GGGATCCAAGAAGTCGAAGAAATGAGCATGATGAATTTTTAGGAGGGTTGGCGCCATGCCTACTTTTTGTCCTTGTTAGTATGGCAGTTTAGTATGTTTGATCTC-TT-CCCTTTTTGGCCTTTTAACTTTAAAAGACGATGTTACTTGTA-TGAATTGGAAAGCTGGTTTAAATTTTTGATACGTTGATCCTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E575560" ref_strand="+" ref_description="SGN-E575560 [35205]">
      <seq>caaacatcaggaaattggttaggatggtttcatcatcaggaaaccaaccaaaattcactcaagatctcgtgctcgcagaatgaaggaggccaagaggaaaggccgtcactctggatatggtaagcgcaaaggtaccagggaggctagactgcctaccaaggtgctttggatgaggagattgagagtcctcaggcgtttgcttcgcaagtatagggaatcaaagaagattgacaaacacatgtatcatgacatgtacatgaaggtgaagggtaatgttttcaagaacaagcgtgtgctgatggaaaatatccacaagacaaaggctgagaaggctagagagaagaccttgtccgaccaatttgaggctaggagggcaaagaacaatggcaagcagagaaagaaagtttgcaaggagggaagaacgtttggctcagggaccaggaggagagaagccagtacaacaacctgcagcaccagctgctgccgcaccagcccagccagctcagggatctaagaagtcgaagaaatgagcaagatgaattgtaaggagggttggcgctatgcctactttttgtccttgttagtatggcagtttagtatgtttgatcccttccctttttggccttttaactttaaaagacaatgttactttgtatgaattctgaaagctggttttagactttttgataccgttgatcctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="63966" stop="61923"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="63667" g_stop="63548" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="119" r_length="119" r_score="0.967"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="63547" i_stop="63057" i_length="491">
            <donor d_prob="0.909" d_score="0.98"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63056" g_stop="62743" g_length="314"/>
          <reference_exon_boundary r_type="cDNA" r_start="120" r_stop="434" r_length="315" r_score="0.987"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="62742" i_stop="62565" i_length="178">
            <donor d_prob="0.513" d_score="0.94"/>
            <acceptor a_prob="1.000" a_score="0.85"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="62564" g_stop="62497" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="435" r_stop="505" r_length="71" r_score="0.868"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="62496" i_stop="62417" i_length="80">
            <donor d_prob="1.000" d_score="0.81"/>
            <acceptor a_prob="0.924" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="62416" g_stop="62223" g_length="194"/>
          <reference_exon_boundary r_type="cDNA" r_start="506" r_stop="701" r_length="196" r_score="0.912"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E575560" ref_strand="+">
        <total_alignment_score>0.951</total_alignment_score>
        <cumulative_length_of_scored_exons>696</cumulative_length_of_scored_exons>
        <coverage percentage="0.993" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E575560" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="63667" e_stop="63548"/>
          <exon e_start="63056" e_stop="62743"/>
          <exon e_start="62564" e_stop="62497"/>
          <exon e_start="62416" e_stop="62223"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATGGTACATCCTTGTCTTGACTGTGATTGCAGAAACTCATTTTTCATGCCCTAATTCAGTTTTTAGGTAGCTCTATCAGTTTGCTGTCAACCATTGGGCATTGGTTTTTTTCTTCTTCCAAATAGTCGTTAAAATGTTAGAAGGACTTGGATTTGATAACTCATTTCTCAATCATAATAGAGAAGAATATAAGAGGTGAACTTCCTATGAGAGTCTTTGGCCATAGATGTCATCTAGGCCAATTGAAGTGAGATACAGGAAATATAAGCCTATATTTAGTGTCACTTCATCTTTTTTGTCCTAACTAAATAGTTTTGTGTACTCCATACCTCAAGAAGTTATTTCAATGTAGGCACCTTTTTGGTTGCTTGGTTTGAAAGATTATCTTGCTCATATATTAACTGGCTAGAACTATGCCATTTCTCTCTTCTTTGTAACTAATGAATATTAGCAGGTGAAATTGCTCTGTTGGCTGATGTCTGTTCTTTTCTCAGGTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAA-GGCAAGCAGAGAAAGAAAGTTTGCAAGGAGAGAAGAACGTTTGGCTCAGGTATTGTTTGAAGCTCATTAAAATTTCTAGGGAAAAGTTGGCTCTGACACTTGATGGAGTGCTCTACTCTACTCCATGTTTTATGGTTTTAAGAAACGTTTCATGCAATTATGGGATTTTATGTCCTTTTAAATAACTGCATAGGATTTTTTCTCATCTTTTCTGTTTCAAATTTCAGGGACCAGGAGGAGAGAAGCCAGT---ACAACCTGCAGCACCAGCCGCTGCTGCACCAGCCCAGCCAGCCCAGTAAGTTCATCTGCTATATTAATTGTAGTTTCTCCTAGGGCCTAGTTTGAACATCATTTGATGAGAATATGTCTTTTCAGGGGATCTAAGAAGTCGAAGAAATGAGCGTGATGAATTGTAAGGAGGGTTGGCGCTATGCCTACTTTTTGTCCTTGTTAGTATGGCAGTTTAGTATGTTTGATCCCTTTGCCCTTTTTGGCCTTTTAACTTTAAAAGACAATGTTACTTGTACTGAATT-TGAAAGCTGG-TTTA-AATTTTTGATA-CGTTGATCCTT</genome_strand>
        <mrna_strand>CAAACATCAGGAAATTGGTT-AGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCAAGATCTCGTGCTCGCAGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAGACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAATGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGGGAAGAACGTTTGGCTCAG..................................................................................................................................................................................GGACCAGGAGGAGAGAAGCCAGTACAACAACCTGCAGCACCAGCTGCTGCCGCACCAGCCCAGCCAGCTCA................................................................................GGGATCTAAGAAGTCGAAGAAATGAGCAAGATGAATTGTAAGGAGGGTTGGCGCTATGCCTACTTTTTGTCCTTGTTAGTATGGCAGTTTAGTATGTTTGATCCC-TT-CCCTTTTTGGCCTTTTAACTTTAAAAGACAATGTTACTTTGTATGAATTCTGAAAGCTGGTTTTAGACTTTTTGATACCGTTGATCCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E580057" ref_strand="-" ref_description="SGN-E580057 [5300]">
      <seq>ttgagaggtcctccagcgtttgcttcgcaagtatagggaaatcaaagacagattgacacacacatgtatcatgacatgtacatgaaggtgaagggtaatgttttcaagaccaagcgtgtgctgatggaaaatatccccaagacaaaggctgagaaggctagagagaagaccttgtccgaccaatttgaggctaggagggcaaagaaccaaggcaagcagagaaagaaagtttgccaaggagggaagaacgtttggctccagggaccaggaggagagaagccagtacaacaacctgcagcaccagctgctgccgcaccagcccagccagctccagggatctaagaagtcgaagaaatgagcaagatgaattgtaaggagggttggcgctatgcctactttttgtccttgttagtatggcagtttagtatgtttgatcccttccctttttggccttttaactttaaaagacaatgttacttgtatgaatttgaaagctggtttaaatttttgatacgttgatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="63297" stop="61926"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62997" g_stop="62743" g_length="255"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="261" r_length="261" r_score="0.925"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="62742" i_stop="62565" i_length="178">
            <donor d_prob="0.513" d_score="0.90"/>
            <acceptor a_prob="1.000" a_score="0.85"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="62564" g_stop="62497" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="262" r_stop="333" r_length="72" r_score="0.853"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="62496" i_stop="62417" i_length="80">
            <donor d_prob="1.000" d_score="0.78"/>
            <acceptor a_prob="0.924" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="62416" g_stop="62226" g_length="191"/>
          <reference_exon_boundary r_type="cDNA" r_start="334" r_stop="521" r_length="188" r_score="0.974"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E580057" ref_strand="-">
        <total_alignment_score>0.934</total_alignment_score>
        <cumulative_length_of_scored_exons>514</cumulative_length_of_scored_exons>
        <coverage percentage="0.987" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E580057" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="62997" e_stop="62743"/>
          <exon e_start="62564" e_stop="62497"/>
          <exon e_start="62416" e_stop="62226"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGAGAG-TCCTCAGGCGTTTGCTTCGCAAGTATAGGG-AATCAAAGA-AGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAA-CAAGGCAAGCAGAGAAAGAAAGTTTG-CAAGGAGAGAAGAACGTTTGGCT-CAGGTATTGTTTGAAGCTCATTAAAATTTCTAGGGAAAAGTTGGCTCTGACACTTGATGGAGTGCTCTACTCTACTCCATGTTTTATGGTTTTAAGAAACGTTTCATGCAATTATGGGATTTTATGTCCTTTTAAATAACTGCATAGGATTTTTTCTCATCTTTTCTGTTTCAAATTTCAGGGACCAGGAGGAGAGAAGCCAGT---ACAACCTGCAGCACCAGCCGCTGCTGCACCAGCCCAGCCAGC-CCAGTAAGTTCATCTGCTATATTAATTGTAGTTTCTCCTAGGGCCTAGTTTGAACATCATTTGATGAGAATATGTCTTTTCAGGGGATCTAAGAAGTCGAAGAAATGAGCGTGATGAATTGTAAGGAGGGTTGGCGCTATGCCTACTTTTTGTCCTTGTTAGTATGGCAGTTTAGTATGTTTGATCCCTTTGCCCTTTTTGGCCTTTTAACTTTAAAAGACAATGTTACTTGTACTGAATTTGAAAGCTGGTTTAAATTTTTGATACGTTGATC</genome_strand>
        <mrna_strand>TTGAGAGGTCCTCCAGCGTTTGCTTCGCAAGTATAGGGAAATCAAAGACAGATTGACACACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGACCAAGCGTGTGCTGATGGAAAATATCCCCAAGACAAAGGCTGAGAAGGCTAGAGAGAAGACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACCAAGGCAAGCAGAGAAAGAAAGTTTGCCAAGGAGGGAAGAACGTTTGGCTCCAG..................................................................................................................................................................................GGACCAGGAGGAGAGAAGCCAGTACAACAACCTGCAGCACCAGCTGCTGCCGCACCAGCCCAGCCAGCTCCA................................................................................GGGATCTAAGAAGTCGAAGAAATGAGCAAGATGAATTGTAAGGAGGGTTGGCGCTATGCCTACTTTTTGTCCTTGTTAGTATGGCAGTTTAGTATGTTTGATCCC-TT-CCCTTTTTGGCCTTTTAACTTTAAAAGACAATGTTACTTGTA-TGAATTTGAAAGCTGGTTTAAATTTTTGATACGTTGATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E715233" ref_strand="+" ref_description="SGN-E715233 [FB13CH03]">
      <seq>gatggtttcatcatcaggaaaccaaccaaaattcactcgagatctcgtgctcgccgaatgaaggaggccaagaggaaaggccgtcactctggatatggtaagcgcaaaggtaccagggaggctagactgcctaccaaggtgctttggatgaggagattgagagtcctcaggcgtttgcttcgcaagtatagggaatcaaagaagattgacaaacacatgtatcatgacatgtacatgaaggtgaagggtaatgttttcaagaacaagcgtgtgctgatggaaaatatccacaagacaaaggctgagaaggctagagagaaaaccttgtccgaccaatttgaggctaggagggcaaagaacaaggcaagcagagaaagaaagtttgcaaggagagaagaacgtttggctcagggaccaggaggagagaagccagtacaacctgcagcaccagccgctgctgcaccagcccagccagcccagggatctaagaagtcgaagaaatgagcgtgatgaattgtaaggagggttggcgctatgcctactttttgtccttgttagtatggcagtttagtatgtttgatccctttgccctttttggccttttaactttaaaagacaatgttacttgtactgaatttgaaagctggtttaaatttttgaaaaaanaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaannnccccgggggggggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="63944" stop="61934"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="63644" g_stop="63548" g_length="97"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="97" r_length="97" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="63547" i_stop="63057" i_length="491">
            <donor d_prob="0.909" d_score="1.00"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63056" g_stop="62743" g_length="314"/>
          <reference_exon_boundary r_type="cDNA" r_start="98" r_stop="411" r_length="314" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="62742" i_stop="62565" i_length="178">
            <donor d_prob="0.513" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="62564" g_stop="62497" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="412" r_stop="479" r_length="68" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="62496" i_stop="62417" i_length="80">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.924" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="62416" g_stop="62237" g_length="180"/>
          <reference_exon_boundary r_type="cDNA" r_start="480" r_stop="659" r_length="180" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="667" polyA_stop="700"/>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E715233" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>659</cumulative_length_of_scored_exons>
        <coverage percentage="0.920" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E715233" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="63644" e_stop="63548"/>
          <exon e_start="63056" e_stop="62743"/>
          <exon e_start="62564" e_stop="62497"/>
          <exon e_start="62416" e_stop="62237"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATGGTACATCCTTGTCTTGACTGTGATTGCAGAAACTCATTTTTCATGCCCTAATTCAGTTTTTAGGTAGCTCTATCAGTTTGCTGTCAACCATTGGGCATTGGTTTTTTTCTTCTTCCAAATAGTCGTTAAAATGTTAGAAGGACTTGGATTTGATAACTCATTTCTCAATCATAATAGAGAAGAATATAAGAGGTGAACTTCCTATGAGAGTCTTTGGCCATAGATGTCATCTAGGCCAATTGAAGTGAGATACAGGAAATATAAGCCTATATTTAGTGTCACTTCATCTTTTTTGTCCTAACTAAATAGTTTTGTGTACTCCATACCTCAAGAAGTTATTTCAATGTAGGCACCTTTTTGGTTGCTTGGTTTGAAAGATTATCTTGCTCATATATTAACTGGCTAGAACTATGCCATTTCTCTCTTCTTTGTAACTAATGAATATTAGCAGGTGAAATTGCTCTGTTGGCTGATGTCTGTTCTTTTCTCAGGTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGAGAAGAACGTTTGGCTCAGGTATTGTTTGAAGCTCATTAAAATTTCTAGGGAAAAGTTGGCTCTGACACTTGATGGAGTGCTCTACTCTACTCCATGTTTTATGGTTTTAAGAAACGTTTCATGCAATTATGGGATTTTATGTCCTTTTAAATAACTGCATAGGATTTTTTCTCATCTTTTCTGTTTCAAATTTCAGGGACCAGGAGGAGAGAAGCCAGTACAACCTGCAGCACCAGCCGCTGCTGCACCAGCCCAGCCAGCCCAGTAAGTTCATCTGCTATATTAATTGTAGTTTCTCCTAGGGCCTAGTTTGAACATCATTTGATGAGAATATGTCTTTTCAGGGGATCTAAGAAGTCGAAGAAATGAGCGTGATGAATTGTAAGGAGGGTTGGCGCTATGCCTACTTTTTGTCCTTGTTAGTATGGCAGTTTAGTATGTTTGATCCCTTTGCCCTTTTTGGCCTTTTAACTTTAAAAGACAATGTTACTTGTACTGAATTTGAAAGCTGGTTTAAATTTTTG</genome_strand>
        <mrna_strand>GATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGAGAAGAACGTTTGGCTCAG..................................................................................................................................................................................GGACCAGGAGGAGAGAAGCCAGTACAACCTGCAGCACCAGCCGCTGCTGCACCAGCCCAGCCAGCCCA................................................................................GGGATCTAAGAAGTCGAAGAAATGAGCGTGATGAATTGTAAGGAGGGTTGGCGCTATGCCTACTTTTTGTCCTTGTTAGTATGGCAGTTTAGTATGTTTGATCCCTTTGCCCTTTTTGGCCTTTTAACTTTAAAAGACAATGTTACTTGTACTGAATTTGAAAGCTGGTTTAAATTTTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E711549" ref_strand="+" ref_description="SGN-E711549 [FB02BC04]">
      <seq>ccgtcactctggccattaaaagcgcaaaggtaccagggaggctagactgcctacccatgtgctttggatgaggagattgagagtcctcaggcgtttgcttcgcaagtatagggaatcaaagaagattgacaaacacatgtatcatgacatgtacatgaaggtgaagggtaatgttttcaagaacaagcgtgtgctgatggaaaatatccacaagacaaaggctgagaaggctagagagaaaaccttgtccgaccaatttgaggctaggagggcaaagaacaaggcaagcagagaaagaaagtttgcaaggagagaagaacgtttggctcagggaccaggaggagagaagccagtacaacctgcagcaccagccgctgctgcaccagcccagccagcccagggatctaagaagtcgaagaaatgagcgtgatgaattgtaaggagggttggcgctatgcctactttttgtccttgttagtatggcagtttagtatgtttgatccctttgccctttttggccttttaactttaaaagacaatgttacttgtactgaatttgaaagctggtttaaatttttgaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="63354" stop="61934"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="63056" g_stop="62743" g_length="314"/>
          <reference_exon_boundary r_type="cDNA" r_start="18" r_stop="331" r_length="314" r_score="0.987"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="62742" i_stop="62565" i_length="178">
            <donor d_prob="0.513" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="62564" g_stop="62497" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="332" r_stop="399" r_length="68" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="62496" i_stop="62417" i_length="80">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.924" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="62416" g_stop="62237" g_length="180"/>
          <reference_exon_boundary r_type="cDNA" r_start="400" r_stop="579" r_length="180" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="580" polyA_stop="591"/>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E711549" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>562</cumulative_length_of_scored_exons>
        <coverage percentage="0.951" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E711549" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="63056" e_stop="62743"/>
          <exon e_start="62564" e_stop="62497"/>
          <exon e_start="62416" e_stop="62237"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGAGAAGAACGTTTGGCTCAGGTATTGTTTGAAGCTCATTAAAATTTCTAGGGAAAAGTTGGCTCTGACACTTGATGGAGTGCTCTACTCTACTCCATGTTTTATGGTTTTAAGAAACGTTTCATGCAATTATGGGATTTTATGTCCTTTTAAATAACTGCATAGGATTTTTTCTCATCTTTTCTGTTTCAAATTTCAGGGACCAGGAGGAGAGAAGCCAGTACAACCTGCAGCACCAGCCGCTGCTGCACCAGCCCAGCCAGCCCAGTAAGTTCATCTGCTATATTAATTGTAGTTTCTCCTAGGGCCTAGTTTGAACATCATTTGATGAGAATATGTCTTTTCAGGGGATCTAAGAAGTCGAAGAAATGAGCGTGATGAATTGTAAGGAGGGTTGGCGCTATGCCTACTTTTTGTCCTTGTTAGTATGGCAGTTTAGTATGTTTGATCCCTTTGCCCTTTTTGGCCTTTTAACTTTAAAAGACAATGTTACTTGTACTGAATTTGAAAGCTGGTTTAAATTTTTG</genome_strand>
        <mrna_strand>AAAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCCATGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGAGAAGAACGTTTGGCTCAG..................................................................................................................................................................................GGACCAGGAGGAGAGAAGCCAGTACAACCTGCAGCACCAGCCGCTGCTGCACCAGCCCAGCCAGCCCA................................................................................GGGATCTAAGAAGTCGAAGAAATGAGCGTGATGAATTGTAAGGAGGGTTGGCGCTATGCCTACTTTTTGTCCTTGTTAGTATGGCAGTTTAGTATGTTTGATCCCTTTGCCCTTTTTGGCCTTTTAACTTTAAAAGACAATGTTACTTGTACTGAATTTGAAAGCTGGTTTAAATTTTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E222219" ref_strand="+" ref_description="SGN-E222219 [cLEL-16-L14](-)">
      <seq>acatgtacatgaaggtgaagggtaatgttttcaagaacaagcgtgtgctgatggaaaatatccacaagacaaaggctgagaaggctagagagaaaaccttgtccgaccaatttgaggctaggagggcaaagaacaaggcaagcagagaaagaaagtttgcaaggagagaagaacgtttggctcagggaccaggaggagagaagccagtacaacctgcagcaccagccgctgctgcaccagcccagccagcccagggatctaagaagtcgaagaaatgagcgtgatgaattgtaaggagggttggcgctatgcctactttttgtccttgttagtatggcagtttagtatgtttgatccctttgccctttttggccttttaactttaaaagacaatgttacttgtactgaatttgaaagctggtttaaatttttgaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="63227" stop="61934"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62927" g_stop="62743" g_length="185"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="185" r_length="185" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="62742" i_stop="62565" i_length="178">
            <donor d_prob="0.513" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="62564" g_stop="62497" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="186" r_stop="253" r_length="68" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="62496" i_stop="62417" i_length="80">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.924" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="62416" g_stop="62237" g_length="180"/>
          <reference_exon_boundary r_type="cDNA" r_start="254" r_stop="433" r_length="180" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="434" polyA_stop="449"/>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E222219" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>433</cumulative_length_of_scored_exons>
        <coverage percentage="0.964" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E222219" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="62927" e_stop="62743"/>
          <exon e_start="62564" e_stop="62497"/>
          <exon e_start="62416" e_stop="62237"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGAGAAGAACGTTTGGCTCAGGTATTGTTTGAAGCTCATTAAAATTTCTAGGGAAAAGTTGGCTCTGACACTTGATGGAGTGCTCTACTCTACTCCATGTTTTATGGTTTTAAGAAACGTTTCATGCAATTATGGGATTTTATGTCCTTTTAAATAACTGCATAGGATTTTTTCTCATCTTTTCTGTTTCAAATTTCAGGGACCAGGAGGAGAGAAGCCAGTACAACCTGCAGCACCAGCCGCTGCTGCACCAGCCCAGCCAGCCCAGTAAGTTCATCTGCTATATTAATTGTAGTTTCTCCTAGGGCCTAGTTTGAACATCATTTGATGAGAATATGTCTTTTCAGGGGATCTAAGAAGTCGAAGAAATGAGCGTGATGAATTGTAAGGAGGGTTGGCGCTATGCCTACTTTTTGTCCTTGTTAGTATGGCAGTTTAGTATGTTTGATCCCTTTGCCCTTTTTGGCCTTTTAACTTTAAAAGACAATGTTACTTGTACTGAATTTGAAAGCTGGTTTAAATTTTTG</genome_strand>
        <mrna_strand>ACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGAGAAGAACGTTTGGCTCAG..................................................................................................................................................................................GGACCAGGAGGAGAGAAGCCAGTACAACCTGCAGCACCAGCCGCTGCTGCACCAGCCCAGCCAGCCCA................................................................................GGGATCTAAGAAGTCGAAGAAATGAGCGTGATGAATTGTAAGGAGGGTTGGCGCTATGCCTACTTTTTGTCCTTGTTAGTATGGCAGTTTAGTATGTTTGATCCCTTTGCCCTTTTTGGCCTTTTAACTTTAAAAGACAATGTTACTTGTACTGAATTTGAAAGCTGGTTTAAATTTTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E586723" ref_strand="+" ref_description="SGN-E586723 [75557]">
      <seq>gaacgtttggctcagggaccaggaggagagaagccagtacaacaacctgcagcaccagccgctgccgcaccagcccagccagctcagggatctaagaagtcgaagaaatgagcatgatgaattgtaaggagggttggcgctatgcctactttttgtccttgttagtatggcagtttagtatgtttgatcccttccctttttggccttttaactttaaaagacaatgttacttgtatgaatttgaaagctggtttaaatttttgaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="62868" stop="61934"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62757" g_stop="62743" g_length="15"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="15" r_length="15" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="62742" i_stop="62565" i_length="178">
            <donor d_prob="0.513" d_score="0.00"/>
            <acceptor a_prob="1.000" a_score="0.87"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="62564" g_stop="62497" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="16" r_stop="86" r_length="71" r_score="0.882"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="62496" i_stop="62417" i_length="80">
            <donor d_prob="1.000" d_score="0.83"/>
            <acceptor a_prob="0.924" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="62416" g_stop="62237" g_length="180"/>
          <reference_exon_boundary r_type="cDNA" r_start="87" r_stop="263" r_length="177" r_score="0.978"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="264" polyA_stop="287"/>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E586723" ref_strand="+">
        <total_alignment_score>0.952</total_alignment_score>
        <cumulative_length_of_scored_exons>263</cumulative_length_of_scored_exons>
        <coverage percentage="0.916" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E586723" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="62757" e_stop="62743"/>
          <exon e_start="62564" e_stop="62497"/>
          <exon e_start="62416" e_stop="62237"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAACGTTTGGCTCAGGTATTGTTTGAAGCTCATTAAAATTTCTAGGGAAAAGTTGGCTCTGACACTTGATGGAGTGCTCTACTCTACTCCATGTTTTATGGTTTTAAGAAACGTTTCATGCAATTATGGGATTTTATGTCCTTTTAAATAACTGCATAGGATTTTTTCTCATCTTTTCTGTTTCAAATTTCAGGGACCAGGAGGAGAGAAGCCAGT---ACAACCTGCAGCACCAGCCGCTGCTGCACCAGCCCAGCCAGCCCAGTAAGTTCATCTGCTATATTAATTGTAGTTTCTCCTAGGGCCTAGTTTGAACATCATTTGATGAGAATATGTCTTTTCAGGGGATCTAAGAAGTCGAAGAAATGAGCGTGATGAATTGTAAGGAGGGTTGGCGCTATGCCTACTTTTTGTCCTTGTTAGTATGGCAGTTTAGTATGTTTGATCCCTTTGCCCTTTTTGGCCTTTTAACTTTAAAAGACAATGTTACTTGTACTGAATTTGAAAGCTGGTTTAAATTTTTG</genome_strand>
        <mrna_strand>GAACGTTTGGCTCAG..................................................................................................................................................................................GGACCAGGAGGAGAGAAGCCAGTACAACAACCTGCAGCACCAGCCGCTGCCGCACCAGCCCAGCCAGCTCA................................................................................GGGATCTAAGAAGTCGAAGAAATGAGCATGATGAATTGTAAGGAGGGTTGGCGCTATGCCTACTTTTTGTCCTTGTTAGTATGGCAGTTTAGTATGTTTGATCCC-TT-CCCTTTTTGGCCTTTTAACTTTAAAAGACAATGTTACTTGTA-TGAATTTGAAAGCTGGTTTAAATTTTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E228927" ref_strand="+" ref_description="SGN-E228927 [cLEL-29-B6](-)">
      <seq>ggcaccaggctgcaccagcccagccagcccagggatctaagaagtcgaagaaatgagcgtgatgaattgtaaggagggttggcgctatgcctactttttgtccttgttagtatggcagtttagtatgtttgatccctttgccctttttggccttttaactttaaaagacaatgttacttgtactgaatttgaaagctggtttaaatttttaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="62819" stop="61934"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62529" g_stop="62497" g_length="33"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="31" r_length="31" r_score="0.818"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="62496" i_stop="62417" i_length="80">
            <donor d_prob="1.000" d_score="0.00"/>
            <acceptor a_prob="0.924" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="62416" g_stop="62237" g_length="180"/>
          <reference_exon_boundary r_type="cDNA" r_start="32" r_stop="211" r_length="180" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="212" polyA_stop="228"/>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E228927" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>213</cumulative_length_of_scored_exons>
        <coverage percentage="0.934" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E228927" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="62529" e_stop="62497"/>
          <exon e_start="62416" e_stop="62237"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACCAGCCGCTGCTGCACCAGCCCAGCCAGCCCAGTAAGTTCATCTGCTATATTAATTGTAGTTTCTCCTAGGGCCTAGTTTGAACATCATTTGATGAGAATATGTCTTTTCAGGGGATCTAAGAAGTCGAAGAAATGAGCGTGATGAATTGTAAGGAGGGTTGGCGCTATGCCTACTTTTTGTCCTTGTTAGTATGGCAGTTTAGTATGTTTGATCCCTTTGCCCTTTTTGGCCTTTTAACTTTAAAAGACAATGTTACTTGTACTGAATTTGAAAGCTGGTTTAAATTTTTG</genome_strand>
        <mrna_strand>GGCACCAG--GCTGCACCAGCCCAGCCAGCCCA................................................................................GGGATCTAAGAAGTCGAAGAAATGAGCGTGATGAATTGTAAGGAGGGTTGGCGCTATGCCTACTTTTTGTCCTTGTTAGTATGGCAGTTTAGTATGTTTGATCCCTTTGCCCTTTTTGGCCTTTTAACTTTAAAAGACAATGTTACTTGTACTGAATTTGAAAGCTGGTTTAAATTTTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E228831" ref_strand="+" ref_description="SGN-E228831 [cLEL-29-B6](-)">
      <seq>ggcaccaggctgcaccagcccagccagcccagggatctaagaagtcgaagaaatgagcgtgatgaattgtaaggagggttggcgctatgcctactttttgtccttgttagtatggcagtttagtatgtttgatccctttgccctttttggccttttaactttaaaagacaatgttacttgtactgaatttgaaagctggtttaaatttttgaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="62819" stop="61934"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62529" g_stop="62497" g_length="33"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="31" r_length="31" r_score="0.818"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="62496" i_stop="62417" i_length="80">
            <donor d_prob="1.000" d_score="0.00"/>
            <acceptor a_prob="0.924" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="62416" g_stop="62237" g_length="180"/>
          <reference_exon_boundary r_type="cDNA" r_start="32" r_stop="211" r_length="180" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="212" polyA_stop="228"/>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E228831" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>213</cumulative_length_of_scored_exons>
        <coverage percentage="0.934" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E228831" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="62529" e_stop="62497"/>
          <exon e_start="62416" e_stop="62237"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACCAGCCGCTGCTGCACCAGCCCAGCCAGCCCAGTAAGTTCATCTGCTATATTAATTGTAGTTTCTCCTAGGGCCTAGTTTGAACATCATTTGATGAGAATATGTCTTTTCAGGGGATCTAAGAAGTCGAAGAAATGAGCGTGATGAATTGTAAGGAGGGTTGGCGCTATGCCTACTTTTTGTCCTTGTTAGTATGGCAGTTTAGTATGTTTGATCCCTTTGCCCTTTTTGGCCTTTTAACTTTAAAAGACAATGTTACTTGTACTGAATTTGAAAGCTGGTTTAAATTTTTG</genome_strand>
        <mrna_strand>GGCACCAG--GCTGCACCAGCCCAGCCAGCCCA................................................................................GGGATCTAAGAAGTCGAAGAAATGAGCGTGATGAATTGTAAGGAGGGTTGGCGCTATGCCTACTTTTTGTCCTTGTTAGTATGGCAGTTTAGTATGTTTGATCCCTTTGCCCTTTTTGGCCTTTTAACTTTAAAAGACAATGTTACTTGTACTGAATTTGAAAGCTGGTTTAAATTTTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E733571" ref_strand="+" ref_description="SGN-E733571 [LB10BE05]">
      <seq>gcttcacaaaatcgaaaatggtttcgttgaagctccagaagcggctcgccgctagtgtcctcaagtgtggaagaggcaaagtttggcttgatcctaatgaaggcaatgaaatctccatggccaattcccgtcaaaacatcaggaaattggttaaggatggtttcatcatcaggaaaccaaccaaaattcactcgagatctcgtgctcgccgaatgaaggaggccaagaggaaaggccgtcactctggatatggtaagcgcaaaggtaccagggaggctagactgcctaccaaggtgctttggatgaggagattgagagtcctcaggcgtttgcttcgcaagtatagggaatcaaagaagattgacaaacacatgtatcatgacatgtacatgaaggtgaagggtaatgttttcaagaacaagcgtgtgctgatggaaaatatccacaagacaaaggctgagaaggctagagagaaaaccttgtccgaccaatttgaggctaggagggcaaagaacaaggcaagcagagaaagaaagtttgcaaggagagaagaacgtttggctcagggaccaggaggagagaagccagtacaacctgcagcaccagccgctgctgcaccagcccagccagcccagggatctaagaagtcgaagaaatgagcgtgatgaattgtaaggagggttggcgctatgcctactttttgtccttgttagtatggcagtttagtatgtttgatccctttgccctttttggccttttaactttaaagacaatgttacttgtactgaatttgaaagctggtttaaattttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="65257" stop="61938"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64957" g_stop="64829" g_length="129"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="129" r_length="129" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64828" i_stop="63671" i_length="1158">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.955" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63670" g_stop="63548" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="130" r_stop="252" r_length="123" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63547" i_stop="63057" i_length="491">
            <donor d_prob="0.909" d_score="1.00"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="63056" g_stop="62743" g_length="314"/>
          <reference_exon_boundary r_type="cDNA" r_start="253" r_stop="566" r_length="314" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="62742" i_stop="62565" i_length="178">
            <donor d_prob="0.513" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="62564" g_stop="62497" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="567" r_stop="634" r_length="68" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="62496" i_stop="62417" i_length="80">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.924" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="62416" g_stop="62238" g_length="179"/>
          <reference_exon_boundary r_type="cDNA" r_start="635" r_stop="812" r_length="178" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E733571" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>813</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E733571" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64957" e_stop="64829"/>
          <exon e_start="63670" e_stop="63548"/>
          <exon e_start="63056" e_stop="62743"/>
          <exon e_start="62564" e_stop="62497"/>
          <exon e_start="62416" e_stop="62238"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTTCACAAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCCGTATGTTTCTGTTTTCTGTTTGTTATCAATATCTATTTACGTTTATGCTATCTCTTTTAATCTCTTGTTTGTATGTTATGGCTTCTGATTGTGAAAGATCTATAGTAGGTTTTGATCAGTTTAGCTCCAACGATGCTTAGGTTATGTTACTTTATCGTTTCGCCGTCTTTTCTTGTGTGGAGTGTTTAATTTTGGAATTTGATCAACCGTAGTGTTGTTTTAACCACATATACTCTGATGTCGACCAGTTCAGATCCATAGAAGCATTGATTATTTGTGTTGAGGTTTTAGGTTTGGATTTTGATCAAACATTACAATGTTTCAACTGAATATACTGTTGAGGTATATTTTTGTCGTAGAGTTTGATCAGTTAAGCTCCAGTGTACCATAGATTAATTTACTGTTACTATCAATTTGCCTTTTGTTAGAGTTGCTGTTTTGAATTTGATCAGTATACTCCTTATGCATTGTTCACAAGATTAGCAGCATACTAATGTTTTTTTATTTATGTCTACTGTGTCAGCTTAGAGTGATATTTTTTAGGTTTTTGCATTGAAAACATATTTGTTTTTGGTAAACATGATTAACAAGGATGGTTGTTCTAGTGTTAAATGGATGCGAATAAACAATTATGCTGATTTTTTGGAAAACTGAAGATGTAGTGGATTGAAATTATTGGCAGATGTGGATAGGTTATGTGACAAGTTATATTTGCTGAAGTTTTTGAGTCGTGAGATTGAAATGTAATTGAGCTGTATATGTTCATTACAACACTGTCATTGTAATTTAATCAGTAATGATGATAGGTTACTAAACAGTGGGATGAATTAACTGCAATTATCTTTGTTATTGGTAGATGTCAATATGGAAAGATACCTATTTTGTGGGATTTCATTGGGTATGTTGTTGTATTGGCAGATATTTATTTGGTGTTGCTGCTTTGCGTTATTTGCCTCTTAATCTGATGTTTAGATGACAAAGTGATATTAATGTTTACTCAATCTAGATAACTAGAACATGTTTGCTGGAACAAGCTTATTGGTTGAGCTTGTGCAAGCCAGTTGCAATCCTTGTAGCTCTCCCTATGTCATTGTGCCAACTATTTTTTGTCATATTTCTATGAACTGCCCGTAATCCCTTCCTTTCCACTTAATACAGGTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATGGTACATCCTTGTCTTGACTGTGATTGCAGAAACTCATTTTTCATGCCCTAATTCAGTTTTTAGGTAGCTCTATCAGTTTGCTGTCAACCATTGGGCATTGGTTTTTTTCTTCTTCCAAATAGTCGTTAAAATGTTAGAAGGACTTGGATTTGATAACTCATTTCTCAATCATAATAGAGAAGAATATAAGAGGTGAACTTCCTATGAGAGTCTTTGGCCATAGATGTCATCTAGGCCAATTGAAGTGAGATACAGGAAATATAAGCCTATATTTAGTGTCACTTCATCTTTTTTGTCCTAACTAAATAGTTTTGTGTACTCCATACCTCAAGAAGTTATTTCAATGTAGGCACCTTTTTGGTTGCTTGGTTTGAAAGATTATCTTGCTCATATATTAACTGGCTAGAACTATGCCATTTCTCTCTTCTTTGTAACTAATGAATATTAGCAGGTGAAATTGCTCTGTTGGCTGATGTCTGTTCTTTTCTCAGGTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGAGAAGAACGTTTGGCTCAGGTATTGTTTGAAGCTCATTAAAATTTCTAGGGAAAAGTTGGCTCTGACACTTGATGGAGTGCTCTACTCTACTCCATGTTTTATGGTTTTAAGAAACGTTTCATGCAATTATGGGATTTTATGTCCTTTTAAATAACTGCATAGGATTTTTTCTCATCTTTTCTGTTTCAAATTTCAGGGACCAGGAGGAGAGAAGCCAGTACAACCTGCAGCACCAGCCGCTGCTGCACCAGCCCAGCCAGCCCAGTAAGTTCATCTGCTATATTAATTGTAGTTTCTCCTAGGGCCTAGTTTGAACATCATTTGATGAGAATATGTCTTTTCAGGGGATCTAAGAAGTCGAAGAAATGAGCGTGATGAATTGTAAGGAGGGTTGGCGCTATGCCTACTTTTTGTCCTTGTTAGTATGGCAGTTTAGTATGTTTGATCCCTTTGCCCTTTTTGGCCTTTTAACTTTAAAAGACAATGTTACTTGTACTGAATTTGAAAGCTGGTTTAAATTTTT</genome_strand>
        <mrna_strand>GCTTCACAAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGAGAAGAACGTTTGGCTCAG..................................................................................................................................................................................GGACCAGGAGGAGAGAAGCCAGTACAACCTGCAGCACCAGCCGCTGCTGCACCAGCCCAGCCAGCCCA................................................................................GGGATCTAAGAAGTCGAAGAAATGAGCGTGATGAATTGTAAGGAGGGTTGGCGCTATGCCTACTTTTTGTCCTTGTTAGTATGGCAGTTTAGTATGTTTGATCCCTTTGCCCTTTTTGGCCTTTTAACTTT-AAAGACAATGTTACTTGTACTGAATTTGAAAGCTGGTTTAAATTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E712590" ref_strand="+" ref_description="SGN-E712590 [FB05BB02]">
      <seq>acaaaatcgaaaatggtttcgttgaagctccagaagcggctcgccgctagtgtcctcaagtgtggaagaggcaaagtttggcttgatcctaatgaaggcaatgaaatctccatggccaattcccgtcaaaacatcaggaaattggttaaggatggtttcatcatcaggaaaccaaccaaaattcactcgagatctcgtgctcgccgaatgaaggaggccaagaggaaaggccgtcactctggatatggtaagcgcaaaggtaccagggaggctagactgcctaccaaggtgctttggatgaggagattgagagtcctcaggcgtttgcttcgcaagtatagggaatcaaagaagattgacaaacacatgtatcatgacatgtacatgaaggtgaagggtaatgttttcaagaacaagcgtgtgctgatggaaaatatccacaagacaaaggctgagaaggctagagagaaaaccttgtccgaccaatttgaggctaggagggcaaagaacaaggcaagcagagaaagaaagtttgcaaggagagaagaacgtttggctcagggaccaggaggagagaagccagtacaacctgcagcaccagccgctgctgcaccagcccagccagcccagggatctaagaagtcgaagaaatgagcgtgatgaattgtaaggagggttggcgctatgcctactttttgtccttgttagtatggcagtttagtatgtttgatccctttgccctttttggccttttaactttaaaagacaatgttacttgtactgaatttgaaagctggtttaaatttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="65252" stop="61939"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64952" g_stop="64829" g_length="124"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="124" r_length="124" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64828" i_stop="63671" i_length="1158">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.955" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63670" g_stop="63548" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="125" r_stop="247" r_length="123" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63547" i_stop="63057" i_length="491">
            <donor d_prob="0.909" d_score="1.00"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="63056" g_stop="62743" g_length="314"/>
          <reference_exon_boundary r_type="cDNA" r_start="248" r_stop="561" r_length="314" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="62742" i_stop="62565" i_length="178">
            <donor d_prob="0.513" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="62564" g_stop="62497" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="562" r_stop="629" r_length="68" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="62496" i_stop="62417" i_length="80">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.924" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="62416" g_stop="62239" g_length="178"/>
          <reference_exon_boundary r_type="cDNA" r_start="630" r_stop="807" r_length="178" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E712590" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>807</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E712590" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64952" e_stop="64829"/>
          <exon e_start="63670" e_stop="63548"/>
          <exon e_start="63056" e_stop="62743"/>
          <exon e_start="62564" e_stop="62497"/>
          <exon e_start="62416" e_stop="62239"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACAAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCCGTATGTTTCTGTTTTCTGTTTGTTATCAATATCTATTTACGTTTATGCTATCTCTTTTAATCTCTTGTTTGTATGTTATGGCTTCTGATTGTGAAAGATCTATAGTAGGTTTTGATCAGTTTAGCTCCAACGATGCTTAGGTTATGTTACTTTATCGTTTCGCCGTCTTTTCTTGTGTGGAGTGTTTAATTTTGGAATTTGATCAACCGTAGTGTTGTTTTAACCACATATACTCTGATGTCGACCAGTTCAGATCCATAGAAGCATTGATTATTTGTGTTGAGGTTTTAGGTTTGGATTTTGATCAAACATTACAATGTTTCAACTGAATATACTGTTGAGGTATATTTTTGTCGTAGAGTTTGATCAGTTAAGCTCCAGTGTACCATAGATTAATTTACTGTTACTATCAATTTGCCTTTTGTTAGAGTTGCTGTTTTGAATTTGATCAGTATACTCCTTATGCATTGTTCACAAGATTAGCAGCATACTAATGTTTTTTTATTTATGTCTACTGTGTCAGCTTAGAGTGATATTTTTTAGGTTTTTGCATTGAAAACATATTTGTTTTTGGTAAACATGATTAACAAGGATGGTTGTTCTAGTGTTAAATGGATGCGAATAAACAATTATGCTGATTTTTTGGAAAACTGAAGATGTAGTGGATTGAAATTATTGGCAGATGTGGATAGGTTATGTGACAAGTTATATTTGCTGAAGTTTTTGAGTCGTGAGATTGAAATGTAATTGAGCTGTATATGTTCATTACAACACTGTCATTGTAATTTAATCAGTAATGATGATAGGTTACTAAACAGTGGGATGAATTAACTGCAATTATCTTTGTTATTGGTAGATGTCAATATGGAAAGATACCTATTTTGTGGGATTTCATTGGGTATGTTGTTGTATTGGCAGATATTTATTTGGTGTTGCTGCTTTGCGTTATTTGCCTCTTAATCTGATGTTTAGATGACAAAGTGATATTAATGTTTACTCAATCTAGATAACTAGAACATGTTTGCTGGAACAAGCTTATTGGTTGAGCTTGTGCAAGCCAGTTGCAATCCTTGTAGCTCTCCCTATGTCATTGTGCCAACTATTTTTTGTCATATTTCTATGAACTGCCCGTAATCCCTTCCTTTCCACTTAATACAGGTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATGGTACATCCTTGTCTTGACTGTGATTGCAGAAACTCATTTTTCATGCCCTAATTCAGTTTTTAGGTAGCTCTATCAGTTTGCTGTCAACCATTGGGCATTGGTTTTTTTCTTCTTCCAAATAGTCGTTAAAATGTTAGAAGGACTTGGATTTGATAACTCATTTCTCAATCATAATAGAGAAGAATATAAGAGGTGAACTTCCTATGAGAGTCTTTGGCCATAGATGTCATCTAGGCCAATTGAAGTGAGATACAGGAAATATAAGCCTATATTTAGTGTCACTTCATCTTTTTTGTCCTAACTAAATAGTTTTGTGTACTCCATACCTCAAGAAGTTATTTCAATGTAGGCACCTTTTTGGTTGCTTGGTTTGAAAGATTATCTTGCTCATATATTAACTGGCTAGAACTATGCCATTTCTCTCTTCTTTGTAACTAATGAATATTAGCAGGTGAAATTGCTCTGTTGGCTGATGTCTGTTCTTTTCTCAGGTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGAGAAGAACGTTTGGCTCAGGTATTGTTTGAAGCTCATTAAAATTTCTAGGGAAAAGTTGGCTCTGACACTTGATGGAGTGCTCTACTCTACTCCATGTTTTATGGTTTTAAGAAACGTTTCATGCAATTATGGGATTTTATGTCCTTTTAAATAACTGCATAGGATTTTTTCTCATCTTTTCTGTTTCAAATTTCAGGGACCAGGAGGAGAGAAGCCAGTACAACCTGCAGCACCAGCCGCTGCTGCACCAGCCCAGCCAGCCCAGTAAGTTCATCTGCTATATTAATTGTAGTTTCTCCTAGGGCCTAGTTTGAACATCATTTGATGAGAATATGTCTTTTCAGGGGATCTAAGAAGTCGAAGAAATGAGCGTGATGAATTGTAAGGAGGGTTGGCGCTATGCCTACTTTTTGTCCTTGTTAGTATGGCAGTTTAGTATGTTTGATCCCTTTGCCCTTTTTGGCCTTTTAACTTTAAAAGACAATGTTACTTGTACTGAATTTGAAAGCTGGTTTAAATTTT</genome_strand>
        <mrna_strand>ACAAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGAGAAGAACGTTTGGCTCAG..................................................................................................................................................................................GGACCAGGAGGAGAGAAGCCAGTACAACCTGCAGCACCAGCCGCTGCTGCACCAGCCCAGCCAGCCCA................................................................................GGGATCTAAGAAGTCGAAGAAATGAGCGTGATGAATTGTAAGGAGGGTTGGCGCTATGCCTACTTTTTGTCCTTGTTAGTATGGCAGTTTAGTATGTTTGATCCCTTTGCCCTTTTTGGCCTTTTAACTTTAAAAGACAATGTTACTTGTACTGAATTTGAAAGCTGGTTTAAATTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E703245" ref_strand="+" ref_description="SGN-E703245 [FA20DH05]">
      <seq>cgactaaatcgaaaatggtttcgttgaagctccagaagcggctcgccgctagtgtcctcaagtgtggaagaggcaaagtttggcttgatcctagtgaaggcaatgaaatctccatggccaattcccgtcaaaacatcaggaaattggttaaggatggtttcatcatcaggaaaccaaccaaaattcactcaagatctcgtgctcgccgaatgaaggaggccaacaggaaaggtcgtcactctggatatgggaagcgcaaaggtaccagggaggctagactgcctaccaaggtgctttggatgaggagattgagagtcctcaggcgtttgcttcacaagtatagggaatcaaagaagattgacaaacacatgtatcatgacatgtacatgcaaagagaagggtaatgttttcaataacaagcgtgtgctgatggaaaatatccacaatacaaaggctgacaacgctacacagaaaaccttgtccgaccaatttgaggctacgagggcaaataacaacgcaagcagagaaagaaagtttgcaaggagagaagaacgtttggctcatggaccatgaggagagaaaccagtacaacctgcagcaccagccgctgctgcaccagcccagccagcgccaggtatctaagaactccaagaaatgagcgtgatgaattgtaaagatggttggcgctatgcctactttttgtccttgttagtatggcagatctaaatgtttgatccctttgctctttttggccttttaacttttaagagacaatgttacttgaactgaattttaaagctggtt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="65252" stop="61947"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64954" g_stop="64829" g_length="126"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="126" r_length="126" r_score="0.968"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64828" i_stop="63671" i_length="1158">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.955" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63670" g_stop="63548" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="127" r_stop="249" r_length="123" r_score="0.976"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63547" i_stop="63057" i_length="491">
            <donor d_prob="0.909" d_score="0.96"/>
            <acceptor a_prob="0.975" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="63056" g_stop="62743" g_length="314"/>
          <reference_exon_boundary r_type="cDNA" r_start="250" r_stop="564" r_length="315" r_score="0.949"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="62742" i_stop="62565" i_length="178">
            <donor d_prob="0.513" d_score="0.96"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="62564" g_stop="62497" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="565" r_stop="633" r_length="69" r_score="0.941"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="62496" i_stop="62417" i_length="80">
            <donor d_prob="1.000" d_score="0.96"/>
            <acceptor a_prob="0.924" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="62416" g_stop="62247" g_length="170"/>
          <reference_exon_boundary r_type="cDNA" r_start="634" r_stop="804" r_length="171" r_score="0.906"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E703245" ref_strand="+">
        <total_alignment_score>0.946</total_alignment_score>
        <cumulative_length_of_scored_exons>801</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E703245" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64954" e_stop="64829"/>
          <exon e_start="63670" e_stop="63548"/>
          <exon e_start="63056" e_stop="62743"/>
          <exon e_start="62564" e_stop="62497"/>
          <exon e_start="62416" e_stop="62247"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCACAAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCCGTATGTTTCTGTTTTCTGTTTGTTATCAATATCTATTTACGTTTATGCTATCTCTTTTAATCTCTTGTTTGTATGTTATGGCTTCTGATTGTGAAAGATCTATAGTAGGTTTTGATCAGTTTAGCTCCAACGATGCTTAGGTTATGTTACTTTATCGTTTCGCCGTCTTTTCTTGTGTGGAGTGTTTAATTTTGGAATTTGATCAACCGTAGTGTTGTTTTAACCACATATACTCTGATGTCGACCAGTTCAGATCCATAGAAGCATTGATTATTTGTGTTGAGGTTTTAGGTTTGGATTTTGATCAAACATTACAATGTTTCAACTGAATATACTGTTGAGGTATATTTTTGTCGTAGAGTTTGATCAGTTAAGCTCCAGTGTACCATAGATTAATTTACTGTTACTATCAATTTGCCTTTTGTTAGAGTTGCTGTTTTGAATTTGATCAGTATACTCCTTATGCATTGTTCACAAGATTAGCAGCATACTAATGTTTTTTTATTTATGTCTACTGTGTCAGCTTAGAGTGATATTTTTTAGGTTTTTGCATTGAAAACATATTTGTTTTTGGTAAACATGATTAACAAGGATGGTTGTTCTAGTGTTAAATGGATGCGAATAAACAATTATGCTGATTTTTTGGAAAACTGAAGATGTAGTGGATTGAAATTATTGGCAGATGTGGATAGGTTATGTGACAAGTTATATTTGCTGAAGTTTTTGAGTCGTGAGATTGAAATGTAATTGAGCTGTATATGTTCATTACAACACTGTCATTGTAATTTAATCAGTAATGATGATAGGTTACTAAACAGTGGGATGAATTAACTGCAATTATCTTTGTTATTGGTAGATGTCAATATGGAAAGATACCTATTTTGTGGGATTTCATTGGGTATGTTGTTGTATTGGCAGATATTTATTTGGTGTTGCTGCTTTGCGTTATTTGCCTCTTAATCTGATGTTTAGATGACAAAGTGATATTAATGTTTACTCAATCTAGATAACTAGAACATGTTTGCTGGAACAAGCTTATTGGTTGAGCTTGTGCAAGCCAGTTGCAATCCTTGTAGCTCTCCCTATGTCATTGTGCCAACTATTTTTTGTCATATTTCTATGAACTGCCCGTAATCCCTTCCTTTCCACTTAATACAGGTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATGGTACATCCTTGTCTTGACTGTGATTGCAGAAACTCATTTTTCATGCCCTAATTCAGTTTTTAGGTAGCTCTATCAGTTTGCTGTCAACCATTGGGCATTGGTTTTTTTCTTCTTCCAAATAGTCGTTAAAATGTTAGAAGGACTTGGATTTGATAACTCATTTCTCAATCATAATAGAGAAGAATATAAGAGGTGAACTTCCTATGAGAGTCTTTGGCCATAGATGTCATCTAGGCCAATTGAAGTGAGATACAGGAAATATAAGCCTATATTTAGTGTCACTTCATCTTTTTTGTCCTAACTAAATAGTTTTGTGTACTCCATACCTCAAGAAGTTATTTCAATGTAGGCACCTTTTTGGTTGCTTGGTTTGAAAGATTATCTTGCTCATATATTAACTGGCTAGAACTATGCCATTTCTCTCTTCTTTGTAACTAATGAATATTAGCAGGTGAAATTGCTCTGTTGGCTGATGTCTGTTCTTTTCTCAGGTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATG-AAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGAGAAGAACGTTTGGCTCAGGTATTGTTTGAAGCTCATTAAAATTTCTAGGGAAAAGTTGGCTCTGACACTTGATGGAGTGCTCTACTCTACTCCATGTTTTATGGTTTTAAGAAACGTTTCATGCAATTATGGGATTTTATGTCCTTTTAAATAACTGCATAGGATTTTTTCTCATCTTTTCTGTTTCAAATTTCAGGGACCAGGAGGAGAGAAGCCAGTACAACCTGCAGCACCAGCCGCTGCTGCACCAGCCCAGCCAGC-CCAGTAAGTTCATCTGCTATATTAATTGTAGTTTCTCCTAGGGCCTAGTTTGAACATCATTTGATGAGAATATGTCTTTTCAGGGGATCTAAGAAGTCGAAGAAATGAGCGTGATGAATTGTAAGGAGGGTTGGCGCTATGCCTACTTTTTGTCCTTGTTAGTATGGCAGTTTAGTATGTTTGATCCCTTTGCCCTTTTTGGCCTTTTAAC-TTTAAAAGACAATGTTACTTGTACTGAATTTGAAAGCTGGTT</genome_strand>
        <mrna_strand>CGACTAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAGTGAAGGCAATGAAATCTCCATGGCCAATTCCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCAAGATCTCGTGCTCGCCGAATGAAGGAGGCCAACAGGAAAGGTCGTCACTCTGGATATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCACAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGCAAAGAGAAGGGTAATGTTTTCAATAACAAGCGTGTGCTGATGGAAAATATCCACAATACAAAGGCTGACAACGCTACACAGAAAACCTTGTCCGACCAATTTGAGGCTACGAGGGCAAATAACAACGCAAGCAGAGAAAGAAAGTTTGCAAGGAGAGAAGAACGTTTGGCTCAT..................................................................................................................................................................................GGACCATGAGGAGAGAAACCAGTACAACCTGCAGCACCAGCCGCTGCTGCACCAGCCCAGCCAGCGCCA................................................................................GGTATCTAAGAACTCCAAGAAATGAGCGTGATGAATTGTAAAGATGGTTGGCGCTATGCCTACTTTTTGTCCTTGTTAGTATGGCAGATCTAAATGTTTGATCCCTTTGCTCTTTTTGGCCTTTTAACTTTTAAGAGACAATGTTACTTGAACTGAATTTTAAAGCTGGTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E579005" ref_strand="+" ref_description="SGN-E579005 [86129]">
      <seq>tcggcacgaggtcacaaaatcgaaaatggtttcgttgaagctccagaagcggctcgccgctagtgtcctcaagtgtggaagaggcaaagtttggcttgatcctaatgaggggaatgaaatctccatggccaattcccgccaaaacatcaggaaattggtgaaggatggtttcatcatcaggaaaccaaccaaaattcactcaagatctcgtgctcgcagaatgaaggaggccaagaggaaaggccgtcactctggatatggtaagcgcaaaggtaccagggaggctagactgcctaccaaggtgctttggatgaggagattgagagtcctcaggcgtttgcttcgcaagtatagggaatcaaagaagattgacaaacacatgtatcatgacatgtacatgaaggtgaagggtaatgttttcaagaacaagcgtgtgctgatggaaaatatccacaagacaaaggctgagaaggctagagagaagaccttgtccgaccaatttgaggctaggagggcaaagaacaaggcaagcagagaaagaaagtttgcaaggagggaagaacgtttggctcagggaccaggaggagagaagccagtacaacaacctgcagcaccagccgctgccgctccagcccagccagctcagggatccaagaagtcgaagaaatgagcatgatgaatttttaggagggttggcgccatgcctactttttgtccttgttagtatggcagtttagtatgtttgatctcttccctttttgggctttaactttaaaaagacgatgttact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="65254" stop="61970"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64956" g_stop="64829" g_length="128"/>
          <reference_exon_boundary r_type="cDNA" r_start="10" r_stop="137" r_length="128" r_score="0.969"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64828" i_stop="63671" i_length="1158">
            <donor d_prob="0.998" d_score="0.96"/>
            <acceptor a_prob="0.955" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63670" g_stop="63548" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="138" r_stop="260" r_length="123" r_score="0.967"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63547" i_stop="63057" i_length="491">
            <donor d_prob="0.909" d_score="0.98"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="63056" g_stop="62743" g_length="314"/>
          <reference_exon_boundary r_type="cDNA" r_start="261" r_stop="574" r_length="314" r_score="0.994"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="62742" i_stop="62565" i_length="178">
            <donor d_prob="0.513" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.87"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="62564" g_stop="62497" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="575" r_stop="645" r_length="71" r_score="0.868"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="62496" i_stop="62417" i_length="80">
            <donor d_prob="1.000" d_score="0.81"/>
            <acceptor a_prob="0.924" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="62416" g_stop="62270" g_length="147"/>
          <reference_exon_boundary r_type="cDNA" r_start="646" r_stop="790" r_length="145" r_score="0.905"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E579005" ref_strand="+">
        <total_alignment_score>0.958</total_alignment_score>
        <cumulative_length_of_scored_exons>780</cumulative_length_of_scored_exons>
        <coverage percentage="0.987" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E579005" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64956" e_stop="64829"/>
          <exon e_start="63670" e_stop="63548"/>
          <exon e_start="63056" e_stop="62743"/>
          <exon e_start="62564" e_stop="62497"/>
          <exon e_start="62416" e_stop="62270"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTCACAAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCCGTATGTTTCTGTTTTCTGTTTGTTATCAATATCTATTTACGTTTATGCTATCTCTTTTAATCTCTTGTTTGTATGTTATGGCTTCTGATTGTGAAAGATCTATAGTAGGTTTTGATCAGTTTAGCTCCAACGATGCTTAGGTTATGTTACTTTATCGTTTCGCCGTCTTTTCTTGTGTGGAGTGTTTAATTTTGGAATTTGATCAACCGTAGTGTTGTTTTAACCACATATACTCTGATGTCGACCAGTTCAGATCCATAGAAGCATTGATTATTTGTGTTGAGGTTTTAGGTTTGGATTTTGATCAAACATTACAATGTTTCAACTGAATATACTGTTGAGGTATATTTTTGTCGTAGAGTTTGATCAGTTAAGCTCCAGTGTACCATAGATTAATTTACTGTTACTATCAATTTGCCTTTTGTTAGAGTTGCTGTTTTGAATTTGATCAGTATACTCCTTATGCATTGTTCACAAGATTAGCAGCATACTAATGTTTTTTTATTTATGTCTACTGTGTCAGCTTAGAGTGATATTTTTTAGGTTTTTGCATTGAAAACATATTTGTTTTTGGTAAACATGATTAACAAGGATGGTTGTTCTAGTGTTAAATGGATGCGAATAAACAATTATGCTGATTTTTTGGAAAACTGAAGATGTAGTGGATTGAAATTATTGGCAGATGTGGATAGGTTATGTGACAAGTTATATTTGCTGAAGTTTTTGAGTCGTGAGATTGAAATGTAATTGAGCTGTATATGTTCATTACAACACTGTCATTGTAATTTAATCAGTAATGATGATAGGTTACTAAACAGTGGGATGAATTAACTGCAATTATCTTTGTTATTGGTAGATGTCAATATGGAAAGATACCTATTTTGTGGGATTTCATTGGGTATGTTGTTGTATTGGCAGATATTTATTTGGTGTTGCTGCTTTGCGTTATTTGCCTCTTAATCTGATGTTTAGATGACAAAGTGATATTAATGTTTACTCAATCTAGATAACTAGAACATGTTTGCTGGAACAAGCTTATTGGTTGAGCTTGTGCAAGCCAGTTGCAATCCTTGTAGCTCTCCCTATGTCATTGTGCCAACTATTTTTTGTCATATTTCTATGAACTGCCCGTAATCCCTTCCTTTCCACTTAATACAGGTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATGGTACATCCTTGTCTTGACTGTGATTGCAGAAACTCATTTTTCATGCCCTAATTCAGTTTTTAGGTAGCTCTATCAGTTTGCTGTCAACCATTGGGCATTGGTTTTTTTCTTCTTCCAAATAGTCGTTAAAATGTTAGAAGGACTTGGATTTGATAACTCATTTCTCAATCATAATAGAGAAGAATATAAGAGGTGAACTTCCTATGAGAGTCTTTGGCCATAGATGTCATCTAGGCCAATTGAAGTGAGATACAGGAAATATAAGCCTATATTTAGTGTCACTTCATCTTTTTTGTCCTAACTAAATAGTTTTGTGTACTCCATACCTCAAGAAGTTATTTCAATGTAGGCACCTTTTTGGTTGCTTGGTTTGAAAGATTATCTTGCTCATATATTAACTGGCTAGAACTATGCCATTTCTCTCTTCTTTGTAACTAATGAATATTAGCAGGTGAAATTGCTCTGTTGGCTGATGTCTGTTCTTTTCTCAGGTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGAGAAGAACGTTTGGCTCAGGTATTGTTTGAAGCTCATTAAAATTTCTAGGGAAAAGTTGGCTCTGACACTTGATGGAGTGCTCTACTCTACTCCATGTTTTATGGTTTTAAGAAACGTTTCATGCAATTATGGGATTTTATGTCCTTTTAAATAACTGCATAGGATTTTTTCTCATCTTTTCTGTTTCAAATTTCAGGGACCAGGAGGAGAGAAGCCAGT---ACAACCTGCAGCACCAGCCGCTGCTGCACCAGCCCAGCCAGCCCAGTAAGTTCATCTGCTATATTAATTGTAGTTTCTCCTAGGGCCTAGTTTGAACATCATTTGATGAGAATATGTCTTTTCAGGGGATCTAAGAAGTCGAAGAAATGAGCGTGATGAATTGTAAGGAGGGTTGGCGCTATGCCTACTTTTTGTCCTTGTTAGTATGGCAGTTTAGTATGTTTGATCCCTTTGCCCTTTTTGGCCTTTTAACTTTAAAAGACAATGTTACT</genome_strand>
        <mrna_strand>GGTCACAAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAGGGGAATGAAATCTCCATGGCCAATTCCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCAAAACATCAGGAAATTGGTGAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCAAGATCTCGTGCTCGCAGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAGACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGGGAAGAACGTTTGGCTCAG..................................................................................................................................................................................GGACCAGGAGGAGAGAAGCCAGTACAACAACCTGCAGCACCAGCCGCTGCCGCTCCAGCCCAGCCAGCTCA................................................................................GGGATCCAAGAAGTCGAAGAAATGAGCATGATGAATTTTTAGGAGGGTTGGCGCCATGCCTACTTTTTGTCCTTGTTAGTATGGCAGTTTAGTATGTTTGATCTC-TT-CCCTTTTTGGGCTTTAACTTTAAAAAGACGATGTTACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E602351" ref_strand="+" ref_description="SGN-E602351 [55330]">
      <seq>cgctagtgtcctcaagtgtggaagaggaaaagtttggcttgatcctaatgaagggaatgaaatctccatggccaattcccgtcaaaacatcaggaaattggttaaggatggtttcatcatcaggaaaccaaccaaaattcactcaagatctcgtgctcgcagaatgaaggaggccaagaggaaaggccgtcactctggatatggtaagcgcaaaggtaccagggaggctagactgcctaccaaggtgctttggatgaggagattgagagtcctcaggcgtttgcttcgcaagtatagggaatcaaagaagattgacaaacacatgtatcatgacatgtacatgaaggtgaagggtaatgttttcaagaacaagcgtgtgctgatggaaaatatccacaagacaaaggctgagaaagctagagagaagaccttgtccgaccaatttgaggctaggagggcaaagaacaaggcaagcagagaaagaaagtttgcaaggagggaagaacgtttggctcagggaccaggaggagagaagccagtacaacaacctgcagcaccagccgctgccgcaccagcccagccagctcagggatctaagaagtcgaagaaatgagcatgatgaattgtaaggagggtcggcgctatgcctactttttgtccttgttagtatggcagtttagtatgtttgatcccttccctttttggccttttaactttaaaagacaatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="65208" stop="61975"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64908" g_stop="64829" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="80" r_length="80" r_score="0.975"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64828" i_stop="63671" i_length="1158">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.955" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63670" g_stop="63548" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="81" r_stop="203" r_length="123" r_score="0.984"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63547" i_stop="63057" i_length="491">
            <donor d_prob="0.909" d_score="0.98"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="63056" g_stop="62743" g_length="314"/>
          <reference_exon_boundary r_type="cDNA" r_start="204" r_stop="517" r_length="314" r_score="0.990"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="62742" i_stop="62565" i_length="178">
            <donor d_prob="0.513" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.87"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="62564" g_stop="62497" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="518" r_stop="588" r_length="71" r_score="0.882"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="62496" i_stop="62417" i_length="80">
            <donor d_prob="1.000" d_score="0.83"/>
            <acceptor a_prob="0.924" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="62416" g_stop="62275" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="589" r_stop="728" r_length="140" r_score="0.972"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E602351" ref_strand="+">
        <total_alignment_score>0.974</total_alignment_score>
        <cumulative_length_of_scored_exons>727</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E602351" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64908" e_stop="64829"/>
          <exon e_start="63670" e_stop="63548"/>
          <exon e_start="63056" e_stop="62743"/>
          <exon e_start="62564" e_stop="62497"/>
          <exon e_start="62416" e_stop="62275"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCCGTATGTTTCTGTTTTCTGTTTGTTATCAATATCTATTTACGTTTATGCTATCTCTTTTAATCTCTTGTTTGTATGTTATGGCTTCTGATTGTGAAAGATCTATAGTAGGTTTTGATCAGTTTAGCTCCAACGATGCTTAGGTTATGTTACTTTATCGTTTCGCCGTCTTTTCTTGTGTGGAGTGTTTAATTTTGGAATTTGATCAACCGTAGTGTTGTTTTAACCACATATACTCTGATGTCGACCAGTTCAGATCCATAGAAGCATTGATTATTTGTGTTGAGGTTTTAGGTTTGGATTTTGATCAAACATTACAATGTTTCAACTGAATATACTGTTGAGGTATATTTTTGTCGTAGAGTTTGATCAGTTAAGCTCCAGTGTACCATAGATTAATTTACTGTTACTATCAATTTGCCTTTTGTTAGAGTTGCTGTTTTGAATTTGATCAGTATACTCCTTATGCATTGTTCACAAGATTAGCAGCATACTAATGTTTTTTTATTTATGTCTACTGTGTCAGCTTAGAGTGATATTTTTTAGGTTTTTGCATTGAAAACATATTTGTTTTTGGTAAACATGATTAACAAGGATGGTTGTTCTAGTGTTAAATGGATGCGAATAAACAATTATGCTGATTTTTTGGAAAACTGAAGATGTAGTGGATTGAAATTATTGGCAGATGTGGATAGGTTATGTGACAAGTTATATTTGCTGAAGTTTTTGAGTCGTGAGATTGAAATGTAATTGAGCTGTATATGTTCATTACAACACTGTCATTGTAATTTAATCAGTAATGATGATAGGTTACTAAACAGTGGGATGAATTAACTGCAATTATCTTTGTTATTGGTAGATGTCAATATGGAAAGATACCTATTTTGTGGGATTTCATTGGGTATGTTGTTGTATTGGCAGATATTTATTTGGTGTTGCTGCTTTGCGTTATTTGCCTCTTAATCTGATGTTTAGATGACAAAGTGATATTAATGTTTACTCAATCTAGATAACTAGAACATGTTTGCTGGAACAAGCTTATTGGTTGAGCTTGTGCAAGCCAGTTGCAATCCTTGTAGCTCTCCCTATGTCATTGTGCCAACTATTTTTTGTCATATTTCTATGAACTGCCCGTAATCCCTTCCTTTCCACTTAATACAGGTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATGGTACATCCTTGTCTTGACTGTGATTGCAGAAACTCATTTTTCATGCCCTAATTCAGTTTTTAGGTAGCTCTATCAGTTTGCTGTCAACCATTGGGCATTGGTTTTTTTCTTCTTCCAAATAGTCGTTAAAATGTTAGAAGGACTTGGATTTGATAACTCATTTCTCAATCATAATAGAGAAGAATATAAGAGGTGAACTTCCTATGAGAGTCTTTGGCCATAGATGTCATCTAGGCCAATTGAAGTGAGATACAGGAAATATAAGCCTATATTTAGTGTCACTTCATCTTTTTTGTCCTAACTAAATAGTTTTGTGTACTCCATACCTCAAGAAGTTATTTCAATGTAGGCACCTTTTTGGTTGCTTGGTTTGAAAGATTATCTTGCTCATATATTAACTGGCTAGAACTATGCCATTTCTCTCTTCTTTGTAACTAATGAATATTAGCAGGTGAAATTGCTCTGTTGGCTGATGTCTGTTCTTTTCTCAGGTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGAGAAGAACGTTTGGCTCAGGTATTGTTTGAAGCTCATTAAAATTTCTAGGGAAAAGTTGGCTCTGACACTTGATGGAGTGCTCTACTCTACTCCATGTTTTATGGTTTTAAGAAACGTTTCATGCAATTATGGGATTTTATGTCCTTTTAAATAACTGCATAGGATTTTTTCTCATCTTTTCTGTTTCAAATTTCAGGGACCAGGAGGAGAGAAGCCAGT---ACAACCTGCAGCACCAGCCGCTGCTGCACCAGCCCAGCCAGCCCAGTAAGTTCATCTGCTATATTAATTGTAGTTTCTCCTAGGGCCTAGTTTGAACATCATTTGATGAGAATATGTCTTTTCAGGGGATCTAAGAAGTCGAAGAAATGAGCGTGATGAATTGTAAGGAGGGTTGGCGCTATGCCTACTTTTTGTCCTTGTTAGTATGGCAGTTTAGTATGTTTGATCCCTTTGCCCTTTTTGGCCTTTTAACTTTAAAAGACAATG</genome_strand>
        <mrna_strand>CGCTAGTGTCCTCAAGTGTGGAAGAGGAAAAGTTTGGCTTGATCCTAATGAAGGGAATGAAATCTCCATGGCCAATTCCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCAAGATCTCGTGCTCGCAGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAAGCTAGAGAGAAGACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGGGAAGAACGTTTGGCTCAG..................................................................................................................................................................................GGACCAGGAGGAGAGAAGCCAGTACAACAACCTGCAGCACCAGCCGCTGCCGCACCAGCCCAGCCAGCTCA................................................................................GGGATCTAAGAAGTCGAAGAAATGAGCATGATGAATTGTAAGGAGGGTCGGCGCTATGCCTACTTTTTGTCCTTGTTAGTATGGCAGTTTAGTATGTTTGATCCC-TT-CCCTTTTTGGCCTTTTAACTTTAAAAGACAATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E588598" ref_strand="+" ref_description="SGN-E588598 [42154]">
      <seq>caaaatcgaaaatggtttcgttgaagctccagaagcggctcgccgctagtgtcctcaagtgtggaagaggcaaagtttggcttgatcctaatgaggggaatgaaatctccatggccaattcccgccaaaacatcaggaaattggtgaaggatggtttcatcatcaggaaaccaaccaaaattcactcaagatctcgtgctcgcagaatgaaggaggccaagaggaaaggccgtcactctggatatggtaagcgcaaaggtaccaggaaggctagactgcctaccaaggtgctttggatgaggagattgagagtcctcaggcgtttgcttcgcaagtatagggaatcaaagaagattgacaaacacatgtatcatgacatgtacatgaaggtgaagggtaatgttttcaagaacaagcgtgtgctgatggaaaatatccacaagacaaaggctgagaaggctagagagaagaccttgtccgaccaatttgaggctaggagggcaaagaacaaggcaagcagagaaagaaagtttgcaaggagggaagaacgtttggctcagggaccaggaggagagaagccagtacaacaacctgcatgcaccagccgctgccgctccaggcccagccagctcagggatccaaggaagtcgaacgaaatgagcatgatgaatttttaggagggttggcgccaatgcctactttttgtccttgttagtatggcagtttagtatgtttgatctcttccctttttggccttttaactttaaaaga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="65251" stop="61980"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64951" g_stop="64829" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="123" r_length="123" r_score="0.984"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64828" i_stop="63671" i_length="1158">
            <donor d_prob="0.998" d_score="0.96"/>
            <acceptor a_prob="0.955" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63670" g_stop="63548" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="124" r_stop="246" r_length="123" r_score="0.967"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63547" i_stop="63057" i_length="491">
            <donor d_prob="0.909" d_score="0.98"/>
            <acceptor a_prob="0.975" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="63056" g_stop="62743" g_length="314"/>
          <reference_exon_boundary r_type="cDNA" r_start="247" r_stop="560" r_length="314" r_score="0.990"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="62742" i_stop="62565" i_length="178">
            <donor d_prob="0.513" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.83"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="62564" g_stop="62497" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="561" r_stop="633" r_length="73" r_score="0.809"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="62496" i_stop="62417" i_length="80">
            <donor d_prob="1.000" d_score="0.71"/>
            <acceptor a_prob="0.924" a_score="0.83"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="62416" g_stop="62280" g_length="137"/>
          <reference_exon_boundary r_type="cDNA" r_start="634" r_stop="771" r_length="138" r_score="0.898"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E588598" ref_strand="+">
        <total_alignment_score>0.953</total_alignment_score>
        <cumulative_length_of_scored_exons>765</cumulative_length_of_scored_exons>
        <coverage percentage="0.992" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E588598" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64951" e_stop="64829"/>
          <exon e_start="63670" e_stop="63548"/>
          <exon e_start="63056" e_stop="62743"/>
          <exon e_start="62564" e_stop="62497"/>
          <exon e_start="62416" e_stop="62280"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCCGTATGTTTCTGTTTTCTGTTTGTTATCAATATCTATTTACGTTTATGCTATCTCTTTTAATCTCTTGTTTGTATGTTATGGCTTCTGATTGTGAAAGATCTATAGTAGGTTTTGATCAGTTTAGCTCCAACGATGCTTAGGTTATGTTACTTTATCGTTTCGCCGTCTTTTCTTGTGTGGAGTGTTTAATTTTGGAATTTGATCAACCGTAGTGTTGTTTTAACCACATATACTCTGATGTCGACCAGTTCAGATCCATAGAAGCATTGATTATTTGTGTTGAGGTTTTAGGTTTGGATTTTGATCAAACATTACAATGTTTCAACTGAATATACTGTTGAGGTATATTTTTGTCGTAGAGTTTGATCAGTTAAGCTCCAGTGTACCATAGATTAATTTACTGTTACTATCAATTTGCCTTTTGTTAGAGTTGCTGTTTTGAATTTGATCAGTATACTCCTTATGCATTGTTCACAAGATTAGCAGCATACTAATGTTTTTTTATTTATGTCTACTGTGTCAGCTTAGAGTGATATTTTTTAGGTTTTTGCATTGAAAACATATTTGTTTTTGGTAAACATGATTAACAAGGATGGTTGTTCTAGTGTTAAATGGATGCGAATAAACAATTATGCTGATTTTTTGGAAAACTGAAGATGTAGTGGATTGAAATTATTGGCAGATGTGGATAGGTTATGTGACAAGTTATATTTGCTGAAGTTTTTGAGTCGTGAGATTGAAATGTAATTGAGCTGTATATGTTCATTACAACACTGTCATTGTAATTTAATCAGTAATGATGATAGGTTACTAAACAGTGGGATGAATTAACTGCAATTATCTTTGTTATTGGTAGATGTCAATATGGAAAGATACCTATTTTGTGGGATTTCATTGGGTATGTTGTTGTATTGGCAGATATTTATTTGGTGTTGCTGCTTTGCGTTATTTGCCTCTTAATCTGATGTTTAGATGACAAAGTGATATTAATGTTTACTCAATCTAGATAACTAGAACATGTTTGCTGGAACAAGCTTATTGGTTGAGCTTGTGCAAGCCAGTTGCAATCCTTGTAGCTCTCCCTATGTCATTGTGCCAACTATTTTTTGTCATATTTCTATGAACTGCCCGTAATCCCTTCCTTTCCACTTAATACAGGTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATGGTACATCCTTGTCTTGACTGTGATTGCAGAAACTCATTTTTCATGCCCTAATTCAGTTTTTAGGTAGCTCTATCAGTTTGCTGTCAACCATTGGGCATTGGTTTTTTTCTTCTTCCAAATAGTCGTTAAAATGTTAGAAGGACTTGGATTTGATAACTCATTTCTCAATCATAATAGAGAAGAATATAAGAGGTGAACTTCCTATGAGAGTCTTTGGCCATAGATGTCATCTAGGCCAATTGAAGTGAGATACAGGAAATATAAGCCTATATTTAGTGTCACTTCATCTTTTTTGTCCTAACTAAATAGTTTTGTGTACTCCATACCTCAAGAAGTTATTTCAATGTAGGCACCTTTTTGGTTGCTTGGTTTGAAAGATTATCTTGCTCATATATTAACTGGCTAGAACTATGCCATTTCTCTCTTCTTTGTAACTAATGAATATTAGCAGGTGAAATTGCTCTGTTGGCTGATGTCTGTTCTTTTCTCAGGTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGAGAAGAACGTTTGGCTCAGGTATTGTTTGAAGCTCATTAAAATTTCTAGGGAAAAGTTGGCTCTGACACTTGATGGAGTGCTCTACTCTACTCCATGTTTTATGGTTTTAAGAAACGTTTCATGCAATTATGGGATTTTATGTCCTTTTAAATAACTGCATAGGATTTTTTCTCATCTTTTCTGTTTCAAATTTCAGGGACCAGGAGGAGAGAAGCCAGT---ACAACCTGCA-GCACCAGCCGCTGCTGCACCA-GCCCAGCCAGCCCAGTAAGTTCATCTGCTATATTAATTGTAGTTTCTCCTAGGGCCTAGTTTGAACATCATTTGATGAGAATATGTCTTTTCAGGGGATCTAA-GAAGTCGAA-GAAATGAGCGTGATGAATTGTAAGGAGGGTTGGCGCTA-TGCCTACTTTTTGTCCTTGTTAGTATGGCAGTTTAGTATGTTTGATCCCTTTGCCCTTTTTGGCCTTTTAACTTTAAAAGA</genome_strand>
        <mrna_strand>CAAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAGGGGAATGAAATCTCCATGGCCAATTCCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCAAAACATCAGGAAATTGGTGAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCAAGATCTCGTGCTCGCAGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGCGCAAAGGTACCAGGAAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAGACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGGGAAGAACGTTTGGCTCAG..................................................................................................................................................................................GGACCAGGAGGAGAGAAGCCAGTACAACAACCTGCATGCACCAGCCGCTGCCGCTCCAGGCCCAGCCAGCTCA................................................................................GGGATCCAAGGAAGTCGAACGAAATGAGCATGATGAATTTTTAGGAGGGTTGGCGCCAATGCCTACTTTTTGTCCTTGTTAGTATGGCAGTTTAGTATGTTTGATCTC-TT-CCCTTTTTGGCCTTTTAACTTTAAAAGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E603821" ref_strand="+" ref_description="SGN-E603821 [67009]">
      <seq>cagcttcacaaaatcgaaaatggtttcgttgaagctccagaagcggctcgccgctagtgtcctcaagtgtggaagaggaaaagtttggcttgatcctaatgaagggaatgaaatctccatggccaattcccgtcaaaacatcaggaaattggttaaggatggtttcatcatcaggaaaccaaccaaaattcactcaagatctcgtgctcgcagaatgaaggaggccaagaggaaaggccgtcactctggatatggtaagcgcaaaggtaccagggaggctagactgcctaccaaggtgctttggatgaggagattgagagtcctcaggcgtttgcttcgcaagtatagggaatcaaagaagattgacaaacacatgtatcatgacatgtacatgaaggtgaagggtaatggtttcaagaacaagcgtgtgctgatggaaaatatccacaagacaaaggctgagaaagctagagagaagaccttgtccgaccaatttgaggctaggagggcaaagaacaaggcaagcagagaaagaaagtttgcaaggagggaagaacgtttggctcagggaccaggaggagagaagccagtacaacaacctgcagcaccagccgctgccgtaccagcccagccagctcagggatctaagaagtcgaagaaatgagcatgatgaattgtaaggagggttggcgctatgcctactttttgtccttgttagtatggcagtttagtatgtttgatccttccctttttgggcttttaacttta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="65259" stop="61985"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64959" g_stop="64829" g_length="131"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="131" r_length="131" r_score="0.985"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64828" i_stop="63671" i_length="1158">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.955" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63670" g_stop="63548" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="132" r_stop="254" r_length="123" r_score="0.984"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63547" i_stop="63057" i_length="491">
            <donor d_prob="0.909" d_score="0.98"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="63056" g_stop="62743" g_length="314"/>
          <reference_exon_boundary r_type="cDNA" r_start="255" r_stop="568" r_length="314" r_score="0.987"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="62742" i_stop="62565" i_length="178">
            <donor d_prob="0.513" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.87"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="62564" g_stop="62497" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="569" r_stop="639" r_length="71" r_score="0.868"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="62496" i_stop="62417" i_length="80">
            <donor d_prob="1.000" d_score="0.81"/>
            <acceptor a_prob="0.924" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="62416" g_stop="62285" g_length="132"/>
          <reference_exon_boundary r_type="cDNA" r_start="640" r_stop="768" r_length="129" r_score="0.962"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E603821" ref_strand="+">
        <total_alignment_score>0.971</total_alignment_score>
        <cumulative_length_of_scored_exons>768</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E603821" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64959" e_stop="64829"/>
          <exon e_start="63670" e_stop="63548"/>
          <exon e_start="63056" e_stop="62743"/>
          <exon e_start="62564" e_stop="62497"/>
          <exon e_start="62416" e_stop="62285"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGCTTCACAAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCCGTATGTTTCTGTTTTCTGTTTGTTATCAATATCTATTTACGTTTATGCTATCTCTTTTAATCTCTTGTTTGTATGTTATGGCTTCTGATTGTGAAAGATCTATAGTAGGTTTTGATCAGTTTAGCTCCAACGATGCTTAGGTTATGTTACTTTATCGTTTCGCCGTCTTTTCTTGTGTGGAGTGTTTAATTTTGGAATTTGATCAACCGTAGTGTTGTTTTAACCACATATACTCTGATGTCGACCAGTTCAGATCCATAGAAGCATTGATTATTTGTGTTGAGGTTTTAGGTTTGGATTTTGATCAAACATTACAATGTTTCAACTGAATATACTGTTGAGGTATATTTTTGTCGTAGAGTTTGATCAGTTAAGCTCCAGTGTACCATAGATTAATTTACTGTTACTATCAATTTGCCTTTTGTTAGAGTTGCTGTTTTGAATTTGATCAGTATACTCCTTATGCATTGTTCACAAGATTAGCAGCATACTAATGTTTTTTTATTTATGTCTACTGTGTCAGCTTAGAGTGATATTTTTTAGGTTTTTGCATTGAAAACATATTTGTTTTTGGTAAACATGATTAACAAGGATGGTTGTTCTAGTGTTAAATGGATGCGAATAAACAATTATGCTGATTTTTTGGAAAACTGAAGATGTAGTGGATTGAAATTATTGGCAGATGTGGATAGGTTATGTGACAAGTTATATTTGCTGAAGTTTTTGAGTCGTGAGATTGAAATGTAATTGAGCTGTATATGTTCATTACAACACTGTCATTGTAATTTAATCAGTAATGATGATAGGTTACTAAACAGTGGGATGAATTAACTGCAATTATCTTTGTTATTGGTAGATGTCAATATGGAAAGATACCTATTTTGTGGGATTTCATTGGGTATGTTGTTGTATTGGCAGATATTTATTTGGTGTTGCTGCTTTGCGTTATTTGCCTCTTAATCTGATGTTTAGATGACAAAGTGATATTAATGTTTACTCAATCTAGATAACTAGAACATGTTTGCTGGAACAAGCTTATTGGTTGAGCTTGTGCAAGCCAGTTGCAATCCTTGTAGCTCTCCCTATGTCATTGTGCCAACTATTTTTTGTCATATTTCTATGAACTGCCCGTAATCCCTTCCTTTCCACTTAATACAGGTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATGGTACATCCTTGTCTTGACTGTGATTGCAGAAACTCATTTTTCATGCCCTAATTCAGTTTTTAGGTAGCTCTATCAGTTTGCTGTCAACCATTGGGCATTGGTTTTTTTCTTCTTCCAAATAGTCGTTAAAATGTTAGAAGGACTTGGATTTGATAACTCATTTCTCAATCATAATAGAGAAGAATATAAGAGGTGAACTTCCTATGAGAGTCTTTGGCCATAGATGTCATCTAGGCCAATTGAAGTGAGATACAGGAAATATAAGCCTATATTTAGTGTCACTTCATCTTTTTTGTCCTAACTAAATAGTTTTGTGTACTCCATACCTCAAGAAGTTATTTCAATGTAGGCACCTTTTTGGTTGCTTGGTTTGAAAGATTATCTTGCTCATATATTAACTGGCTAGAACTATGCCATTTCTCTCTTCTTTGTAACTAATGAATATTAGCAGGTGAAATTGCTCTGTTGGCTGATGTCTGTTCTTTTCTCAGGTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGAGAAGAACGTTTGGCTCAGGTATTGTTTGAAGCTCATTAAAATTTCTAGGGAAAAGTTGGCTCTGACACTTGATGGAGTGCTCTACTCTACTCCATGTTTTATGGTTTTAAGAAACGTTTCATGCAATTATGGGATTTTATGTCCTTTTAAATAACTGCATAGGATTTTTTCTCATCTTTTCTGTTTCAAATTTCAGGGACCAGGAGGAGAGAAGCCAGT---ACAACCTGCAGCACCAGCCGCTGCTGCACCAGCCCAGCCAGCCCAGTAAGTTCATCTGCTATATTAATTGTAGTTTCTCCTAGGGCCTAGTTTGAACATCATTTGATGAGAATATGTCTTTTCAGGGGATCTAAGAAGTCGAAGAAATGAGCGTGATGAATTGTAAGGAGGGTTGGCGCTATGCCTACTTTTTGTCCTTGTTAGTATGGCAGTTTAGTATGTTTGATCCCTTTGCCCTTTTTGGCCTTTTAACTTTA</genome_strand>
        <mrna_strand>CAGCTTCACAAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGAAAAGTTTGGCTTGATCCTAATGAAGGGAATGAAATCTCCATGGCCAATTCCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCAAGATCTCGTGCTCGCAGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGGTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAAGCTAGAGAGAAGACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGGGAAGAACGTTTGGCTCAG..................................................................................................................................................................................GGACCAGGAGGAGAGAAGCCAGTACAACAACCTGCAGCACCAGCCGCTGCCGTACCAGCCCAGCCAGCTCA................................................................................GGGATCTAAGAAGTCGAAGAAATGAGCATGATGAATTGTAAGGAGGGTTGGCGCTATGCCTACTTTTTGTCCTTGTTAGTATGGCAGTTTAGTATGTTTGAT-CC-TT-CCCTTTTTGGGCTTTTAACTTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E601385" ref_strand="+" ref_description="SGN-E601385 [54423]">
      <seq>cacaaaatcgaaaatggtttcgttgaagctccagaagcggctcgccgctagtgtcctcaagtgtggaagaggaaaagtttggcttgatcctaatgaagggaatgaaatctccatggccaattcccgtcaaaacatcaggaaattggttaaggatggtttcatcatcaggaaaccaaccaaaattcactcaagatctcgtgctcgcagaatgaaggaggccaagaggaaaggccgtcactctggatatggtaagcgcaaaggtaccagggaggctagactgcctaccaaggtgctttggatgaggagattgagagtcctcaggcgtttgcttcgcaagtatagggaatcaaagaagattgacaaacacatgtatcatgacatgtacatgaaggtgaagggtaatgttttcaagaacaagcgtgtgctgatggaaaatatccacaagacaaaggctgagaaggctagagagaagaccttgtccgaccaatttgaggctaggagggcaaagaacaaggcaagcagagaaagaaagtttgcaaggagggaagaacgtttggctcagggaccaggaggagagaagccagtacaacaacctgcagcaccagctgctgccgcaccagcccagccagctcagggatctcaagaagtcgaagaaatgagcaagatgaattgtaaggagggttggcgctatgcctactttttgtccttgttaagtatggcagtttagatatgtttgatcnctttcccttttttggaccttttaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="65253" stop="61989"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64953" g_stop="64829" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="125" r_length="125" r_score="0.984"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64828" i_stop="63671" i_length="1158">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.955" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63670" g_stop="63548" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="126" r_stop="248" r_length="123" r_score="0.984"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63547" i_stop="63057" i_length="491">
            <donor d_prob="0.909" d_score="0.98"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="63056" g_stop="62743" g_length="314"/>
          <reference_exon_boundary r_type="cDNA" r_start="249" r_stop="562" r_length="314" r_score="0.994"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="62742" i_stop="62565" i_length="178">
            <donor d_prob="0.513" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.85"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="62564" g_stop="62497" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="563" r_stop="633" r_length="71" r_score="0.868"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="62496" i_stop="62417" i_length="80">
            <donor d_prob="1.000" d_score="0.81"/>
            <acceptor a_prob="0.924" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="62416" g_stop="62289" g_length="128"/>
          <reference_exon_boundary r_type="cDNA" r_start="634" r_stop="765" r_length="132" r_score="0.898"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E601385" ref_strand="+">
        <total_alignment_score>0.963</total_alignment_score>
        <cumulative_length_of_scored_exons>758</cumulative_length_of_scored_exons>
        <coverage percentage="0.991" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E601385" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64953" e_stop="64829"/>
          <exon e_start="63670" e_stop="63548"/>
          <exon e_start="63056" e_stop="62743"/>
          <exon e_start="62564" e_stop="62497"/>
          <exon e_start="62416" e_stop="62289"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CACAAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCCGTATGTTTCTGTTTTCTGTTTGTTATCAATATCTATTTACGTTTATGCTATCTCTTTTAATCTCTTGTTTGTATGTTATGGCTTCTGATTGTGAAAGATCTATAGTAGGTTTTGATCAGTTTAGCTCCAACGATGCTTAGGTTATGTTACTTTATCGTTTCGCCGTCTTTTCTTGTGTGGAGTGTTTAATTTTGGAATTTGATCAACCGTAGTGTTGTTTTAACCACATATACTCTGATGTCGACCAGTTCAGATCCATAGAAGCATTGATTATTTGTGTTGAGGTTTTAGGTTTGGATTTTGATCAAACATTACAATGTTTCAACTGAATATACTGTTGAGGTATATTTTTGTCGTAGAGTTTGATCAGTTAAGCTCCAGTGTACCATAGATTAATTTACTGTTACTATCAATTTGCCTTTTGTTAGAGTTGCTGTTTTGAATTTGATCAGTATACTCCTTATGCATTGTTCACAAGATTAGCAGCATACTAATGTTTTTTTATTTATGTCTACTGTGTCAGCTTAGAGTGATATTTTTTAGGTTTTTGCATTGAAAACATATTTGTTTTTGGTAAACATGATTAACAAGGATGGTTGTTCTAGTGTTAAATGGATGCGAATAAACAATTATGCTGATTTTTTGGAAAACTGAAGATGTAGTGGATTGAAATTATTGGCAGATGTGGATAGGTTATGTGACAAGTTATATTTGCTGAAGTTTTTGAGTCGTGAGATTGAAATGTAATTGAGCTGTATATGTTCATTACAACACTGTCATTGTAATTTAATCAGTAATGATGATAGGTTACTAAACAGTGGGATGAATTAACTGCAATTATCTTTGTTATTGGTAGATGTCAATATGGAAAGATACCTATTTTGTGGGATTTCATTGGGTATGTTGTTGTATTGGCAGATATTTATTTGGTGTTGCTGCTTTGCGTTATTTGCCTCTTAATCTGATGTTTAGATGACAAAGTGATATTAATGTTTACTCAATCTAGATAACTAGAACATGTTTGCTGGAACAAGCTTATTGGTTGAGCTTGTGCAAGCCAGTTGCAATCCTTGTAGCTCTCCCTATGTCATTGTGCCAACTATTTTTTGTCATATTTCTATGAACTGCCCGTAATCCCTTCCTTTCCACTTAATACAGGTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATGGTACATCCTTGTCTTGACTGTGATTGCAGAAACTCATTTTTCATGCCCTAATTCAGTTTTTAGGTAGCTCTATCAGTTTGCTGTCAACCATTGGGCATTGGTTTTTTTCTTCTTCCAAATAGTCGTTAAAATGTTAGAAGGACTTGGATTTGATAACTCATTTCTCAATCATAATAGAGAAGAATATAAGAGGTGAACTTCCTATGAGAGTCTTTGGCCATAGATGTCATCTAGGCCAATTGAAGTGAGATACAGGAAATATAAGCCTATATTTAGTGTCACTTCATCTTTTTTGTCCTAACTAAATAGTTTTGTGTACTCCATACCTCAAGAAGTTATTTCAATGTAGGCACCTTTTTGGTTGCTTGGTTTGAAAGATTATCTTGCTCATATATTAACTGGCTAGAACTATGCCATTTCTCTCTTCTTTGTAACTAATGAATATTAGCAGGTGAAATTGCTCTGTTGGCTGATGTCTGTTCTTTTCTCAGGTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGAGAAGAACGTTTGGCTCAGGTATTGTTTGAAGCTCATTAAAATTTCTAGGGAAAAGTTGGCTCTGACACTTGATGGAGTGCTCTACTCTACTCCATGTTTTATGGTTTTAAGAAACGTTTCATGCAATTATGGGATTTTATGTCCTTTTAAATAACTGCATAGGATTTTTTCTCATCTTTTCTGTTTCAAATTTCAGGGACCAGGAGGAGAGAAGCCAGT---ACAACCTGCAGCACCAGCCGCTGCTGCACCAGCCCAGCCAGCCCAGTAAGTTCATCTGCTATATTAATTGTAGTTTCTCCTAGGGCCTAGTTTGAACATCATTTGATGAGAATATGTCTTTTCAGGGGATCT-AAGAAGTCGAAGAAATGAGCGTGATGAATTGTAAGGAGGGTTGGCGCTATGCCTACTTTTTGTCCTTGTT-AGTATGGCAGTTTAG-TATGTTTGATCCCTTTGCCCTTTTTGG-CCTTTTAAC</genome_strand>
        <mrna_strand>CACAAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGAAAAGTTTGGCTTGATCCTAATGAAGGGAATGAAATCTCCATGGCCAATTCCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCAAGATCTCGTGCTCGCAGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAGACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGGGAAGAACGTTTGGCTCAG..................................................................................................................................................................................GGACCAGGAGGAGAGAAGCCAGTACAACAACCTGCAGCACCAGCTGCTGCCGCACCAGCCCAGCCAGCTCA................................................................................GGGATCTCAAGAAGTCGAAGAAATGAGCAAGATGAATTGTAAGGAGGGTTGGCGCTATGCCTACTTTTTGTCCTTGTTAAGTATGGCAGTTTAGATATGTTTGATCNCTTTCCCTTTTTTGGACCTTTTAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E455971" ref_strand="+" ref_description="SGN-E455971 [cSTS-28-K13]">
      <seq>acaaaatcgaaaatggtttcgttgaagctccagaagcggctcgccgctagtgtcctcaagtgtggaagaggaaaagtttggcttgatcctaatgaagggaatgaaatctccatggccaattcccgtcaaaacatcaggaaattggttaaggatggtttcatcatcaggaaaccaaccaaaattcactcaagatctcgtgctcgcagaatgaaggaggccaagaggaaaggccgtcactctggatatggtaagcgcaaaggtaccagggaggctagactgcctaccaaggtgctttggatgaggagattgagagtcctcaggcgtttgcttcgcaagtatagggaatcaaagaagattgacaaacacatgtatcatgacatgtacatgaaggtgaagggtaatgttttcaagacaagncgtgtgctgatggaaaatatccacaagacaaaggctgagaaagctagagagaagaccttgtccgaccaatttgaggctaggagggcaaagaacaaggcaagcagagaaagaaagtttgcaaggagggaagaacgtttggctcanggaccaggaggagagaagccagtacaacaacctgcagcaccagccgctgccgcaccagcccagccagctcagggatctaagaagtcgaagaaatgagcatgatgaattgtaaggagggttggcgctatgcctactttttgtccttgttagtatggcagtttagtatggtttgatcccttccctttttggccttttaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="65252" stop="61990"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64952" g_stop="64829" g_length="124"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="124" r_length="124" r_score="0.984"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64828" i_stop="63671" i_length="1158">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.955" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63670" g_stop="63548" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="125" r_stop="247" r_length="123" r_score="0.984"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63547" i_stop="63057" i_length="491">
            <donor d_prob="0.909" d_score="0.98"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="63056" g_stop="62743" g_length="314"/>
          <reference_exon_boundary r_type="cDNA" r_start="248" r_stop="561" r_length="314" r_score="0.978"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="62742" i_stop="62565" i_length="178">
            <donor d_prob="0.513" d_score="0.96"/>
            <acceptor a_prob="1.000" a_score="0.87"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="62564" g_stop="62497" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="562" r_stop="632" r_length="71" r_score="0.882"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="62496" i_stop="62417" i_length="80">
            <donor d_prob="1.000" d_score="0.83"/>
            <acceptor a_prob="0.924" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="62416" g_stop="62290" g_length="127"/>
          <reference_exon_boundary r_type="cDNA" r_start="633" r_stop="758" r_length="126" r_score="0.961"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E455971" ref_strand="+">
        <total_alignment_score>0.968</total_alignment_score>
        <cumulative_length_of_scored_exons>756</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E455971" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64952" e_stop="64829"/>
          <exon e_start="63670" e_stop="63548"/>
          <exon e_start="63056" e_stop="62743"/>
          <exon e_start="62564" e_stop="62497"/>
          <exon e_start="62416" e_stop="62290"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACAAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCCGTATGTTTCTGTTTTCTGTTTGTTATCAATATCTATTTACGTTTATGCTATCTCTTTTAATCTCTTGTTTGTATGTTATGGCTTCTGATTGTGAAAGATCTATAGTAGGTTTTGATCAGTTTAGCTCCAACGATGCTTAGGTTATGTTACTTTATCGTTTCGCCGTCTTTTCTTGTGTGGAGTGTTTAATTTTGGAATTTGATCAACCGTAGTGTTGTTTTAACCACATATACTCTGATGTCGACCAGTTCAGATCCATAGAAGCATTGATTATTTGTGTTGAGGTTTTAGGTTTGGATTTTGATCAAACATTACAATGTTTCAACTGAATATACTGTTGAGGTATATTTTTGTCGTAGAGTTTGATCAGTTAAGCTCCAGTGTACCATAGATTAATTTACTGTTACTATCAATTTGCCTTTTGTTAGAGTTGCTGTTTTGAATTTGATCAGTATACTCCTTATGCATTGTTCACAAGATTAGCAGCATACTAATGTTTTTTTATTTATGTCTACTGTGTCAGCTTAGAGTGATATTTTTTAGGTTTTTGCATTGAAAACATATTTGTTTTTGGTAAACATGATTAACAAGGATGGTTGTTCTAGTGTTAAATGGATGCGAATAAACAATTATGCTGATTTTTTGGAAAACTGAAGATGTAGTGGATTGAAATTATTGGCAGATGTGGATAGGTTATGTGACAAGTTATATTTGCTGAAGTTTTTGAGTCGTGAGATTGAAATGTAATTGAGCTGTATATGTTCATTACAACACTGTCATTGTAATTTAATCAGTAATGATGATAGGTTACTAAACAGTGGGATGAATTAACTGCAATTATCTTTGTTATTGGTAGATGTCAATATGGAAAGATACCTATTTTGTGGGATTTCATTGGGTATGTTGTTGTATTGGCAGATATTTATTTGGTGTTGCTGCTTTGCGTTATTTGCCTCTTAATCTGATGTTTAGATGACAAAGTGATATTAATGTTTACTCAATCTAGATAACTAGAACATGTTTGCTGGAACAAGCTTATTGGTTGAGCTTGTGCAAGCCAGTTGCAATCCTTGTAGCTCTCCCTATGTCATTGTGCCAACTATTTTTTGTCATATTTCTATGAACTGCCCGTAATCCCTTCCTTTCCACTTAATACAGGTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATGGTACATCCTTGTCTTGACTGTGATTGCAGAAACTCATTTTTCATGCCCTAATTCAGTTTTTAGGTAGCTCTATCAGTTTGCTGTCAACCATTGGGCATTGGTTTTTTTCTTCTTCCAAATAGTCGTTAAAATGTTAGAAGGACTTGGATTTGATAACTCATTTCTCAATCATAATAGAGAAGAATATAAGAGGTGAACTTCCTATGAGAGTCTTTGGCCATAGATGTCATCTAGGCCAATTGAAGTGAGATACAGGAAATATAAGCCTATATTTAGTGTCACTTCATCTTTTTTGTCCTAACTAAATAGTTTTGTGTACTCCATACCTCAAGAAGTTATTTCAATGTAGGCACCTTTTTGGTTGCTTGGTTTGAAAGATTATCTTGCTCATATATTAACTGGCTAGAACTATGCCATTTCTCTCTTCTTTGTAACTAATGAATATTAGCAGGTGAAATTGCTCTGTTGGCTGATGTCTGTTCTTTTCTCAGGTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAG-CGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGAGAAGAACGTTTGGCTCAGGTATTGTTTGAAGCTCATTAAAATTTCTAGGGAAAAGTTGGCTCTGACACTTGATGGAGTGCTCTACTCTACTCCATGTTTTATGGTTTTAAGAAACGTTTCATGCAATTATGGGATTTTATGTCCTTTTAAATAACTGCATAGGATTTTTTCTCATCTTTTCTGTTTCAAATTTCAGGGACCAGGAGGAGAGAAGCCAGT---ACAACCTGCAGCACCAGCCGCTGCTGCACCAGCCCAGCCAGCCCAGTAAGTTCATCTGCTATATTAATTGTAGTTTCTCCTAGGGCCTAGTTTGAACATCATTTGATGAGAATATGTCTTTTCAGGGGATCTAAGAAGTCGAAGAAATGAGCGTGATGAATTGTAAGGAGGGTTGGCGCTATGCCTACTTTTTGTCCTTGTTAGTATGGCAGTTTAGTAT-GTTTGATCCCTTTGCCCTTTTTGGCCTTTTAA</genome_strand>
        <mrna_strand>ACAAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGAAAAGTTTGGCTTGATCCTAATGAAGGGAATGAAATCTCCATGGCCAATTCCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCAAGATCTCGTGCTCGCAGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAG-ACAAGNCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAAGCTAGAGAGAAGACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGGGAAGAACGTTTGGCTCAN..................................................................................................................................................................................GGACCAGGAGGAGAGAAGCCAGTACAACAACCTGCAGCACCAGCCGCTGCCGCACCAGCCCAGCCAGCTCA................................................................................GGGATCTAAGAAGTCGAAGAAATGAGCATGATGAATTGTAAGGAGGGTTGGCGCTATGCCTACTTTTTGTCCTTGTTAGTATGGCAGTTTAGTATGGTTTGATCCC-TT-CCCTTTTTGGCCTTTTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E346192" ref_strand="+" ref_description="SGN-E346192 [cTOF-23-E7]">
      <seq>cttcacaaaatcgaaaatggtttcgttgaagctccagaagcggctcgccgctagtgtcctcaagtgtggaagaggcaaagtttggcttgatcctaatgaaggcaatgaaatctccatggccaattcccgtcaaaacatcaggaaattggttaaggatggtttcatcatcaggaaaccaaccaaaattcactcgagatctcgtgctcgccgaatgaaggaggccaagaggaaaggccgtcactctggatatggtaagcgcaaaggtaccagggaggctagactgcctaccaaggtgctttggatgaggagattgagagtcctcaggcgtttgcttcgcaagtatagggaatcaaagaagattgacaaacacatgtatcatgacatgtacatgaaggtgaagggtaatgttttcaagacaagncgtgtgctgatggaaaatatccacaagacaaaggctgagaaggctagagagaaaaccttgtccgaccaatttgaggctaggagggcaaagaacaaggcaagcagagaaagaaagtttgcaaggagagaagaacgtttggctcagggaccaggaggagagaagccagtacaacctgcagcaccagccgctgctgcaccagcccagccagcccagggatctaagaagtcgaagaaatgagcgtgatgaattgtaaggagggttggcgctatgcctactttttgtccttgntagtatgggcagttagtatggtttgatccctttgccctttttggcctttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="65256" stop="61992"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64956" g_stop="64829" g_length="128"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="128" r_length="128" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64828" i_stop="63671" i_length="1158">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.955" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63670" g_stop="63548" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="129" r_stop="251" r_length="123" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63547" i_stop="63057" i_length="491">
            <donor d_prob="0.909" d_score="1.00"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="63056" g_stop="62743" g_length="314"/>
          <reference_exon_boundary r_type="cDNA" r_start="252" r_stop="565" r_length="314" r_score="0.990"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="62742" i_stop="62565" i_length="178">
            <donor d_prob="0.513" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="62564" g_stop="62497" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="566" r_stop="633" r_length="68" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="62496" i_stop="62417" i_length="80">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.924" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="62416" g_stop="62292" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="634" r_stop="759" r_length="126" r_score="0.944"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E346192" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>758</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E346192" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64956" e_stop="64829"/>
          <exon e_start="63670" e_stop="63548"/>
          <exon e_start="63056" e_stop="62743"/>
          <exon e_start="62564" e_stop="62497"/>
          <exon e_start="62416" e_stop="62292"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTCACAAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCCGTATGTTTCTGTTTTCTGTTTGTTATCAATATCTATTTACGTTTATGCTATCTCTTTTAATCTCTTGTTTGTATGTTATGGCTTCTGATTGTGAAAGATCTATAGTAGGTTTTGATCAGTTTAGCTCCAACGATGCTTAGGTTATGTTACTTTATCGTTTCGCCGTCTTTTCTTGTGTGGAGTGTTTAATTTTGGAATTTGATCAACCGTAGTGTTGTTTTAACCACATATACTCTGATGTCGACCAGTTCAGATCCATAGAAGCATTGATTATTTGTGTTGAGGTTTTAGGTTTGGATTTTGATCAAACATTACAATGTTTCAACTGAATATACTGTTGAGGTATATTTTTGTCGTAGAGTTTGATCAGTTAAGCTCCAGTGTACCATAGATTAATTTACTGTTACTATCAATTTGCCTTTTGTTAGAGTTGCTGTTTTGAATTTGATCAGTATACTCCTTATGCATTGTTCACAAGATTAGCAGCATACTAATGTTTTTTTATTTATGTCTACTGTGTCAGCTTAGAGTGATATTTTTTAGGTTTTTGCATTGAAAACATATTTGTTTTTGGTAAACATGATTAACAAGGATGGTTGTTCTAGTGTTAAATGGATGCGAATAAACAATTATGCTGATTTTTTGGAAAACTGAAGATGTAGTGGATTGAAATTATTGGCAGATGTGGATAGGTTATGTGACAAGTTATATTTGCTGAAGTTTTTGAGTCGTGAGATTGAAATGTAATTGAGCTGTATATGTTCATTACAACACTGTCATTGTAATTTAATCAGTAATGATGATAGGTTACTAAACAGTGGGATGAATTAACTGCAATTATCTTTGTTATTGGTAGATGTCAATATGGAAAGATACCTATTTTGTGGGATTTCATTGGGTATGTTGTTGTATTGGCAGATATTTATTTGGTGTTGCTGCTTTGCGTTATTTGCCTCTTAATCTGATGTTTAGATGACAAAGTGATATTAATGTTTACTCAATCTAGATAACTAGAACATGTTTGCTGGAACAAGCTTATTGGTTGAGCTTGTGCAAGCCAGTTGCAATCCTTGTAGCTCTCCCTATGTCATTGTGCCAACTATTTTTTGTCATATTTCTATGAACTGCCCGTAATCCCTTCCTTTCCACTTAATACAGGTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATGGTACATCCTTGTCTTGACTGTGATTGCAGAAACTCATTTTTCATGCCCTAATTCAGTTTTTAGGTAGCTCTATCAGTTTGCTGTCAACCATTGGGCATTGGTTTTTTTCTTCTTCCAAATAGTCGTTAAAATGTTAGAAGGACTTGGATTTGATAACTCATTTCTCAATCATAATAGAGAAGAATATAAGAGGTGAACTTCCTATGAGAGTCTTTGGCCATAGATGTCATCTAGGCCAATTGAAGTGAGATACAGGAAATATAAGCCTATATTTAGTGTCACTTCATCTTTTTTGTCCTAACTAAATAGTTTTGTGTACTCCATACCTCAAGAAGTTATTTCAATGTAGGCACCTTTTTGGTTGCTTGGTTTGAAAGATTATCTTGCTCATATATTAACTGGCTAGAACTATGCCATTTCTCTCTTCTTTGTAACTAATGAATATTAGCAGGTGAAATTGCTCTGTTGGCTGATGTCTGTTCTTTTCTCAGGTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAG-CGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGAGAAGAACGTTTGGCTCAGGTATTGTTTGAAGCTCATTAAAATTTCTAGGGAAAAGTTGGCTCTGACACTTGATGGAGTGCTCTACTCTACTCCATGTTTTATGGTTTTAAGAAACGTTTCATGCAATTATGGGATTTTATGTCCTTTTAAATAACTGCATAGGATTTTTTCTCATCTTTTCTGTTTCAAATTTCAGGGACCAGGAGGAGAGAAGCCAGTACAACCTGCAGCACCAGCCGCTGCTGCACCAGCCCAGCCAGCCCAGTAAGTTCATCTGCTATATTAATTGTAGTTTCTCCTAGGGCCTAGTTTGAACATCATTTGATGAGAATATGTCTTTTCAGGGGATCTAAGAAGTCGAAGAAATGAGCGTGATGAATTGTAAGGAGGGTTGGCGCTATGCCTACTTTTTGTCCTTGTTAGTATGGCAGTTTAGTAT-GTTTGATCCCTTTGCCCTTTTTGGCCTTTT</genome_strand>
        <mrna_strand>CTTCACAAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAG-ACAAGNCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGAGAAGAACGTTTGGCTCAG..................................................................................................................................................................................GGACCAGGAGGAGAGAAGCCAGTACAACCTGCAGCACCAGCCGCTGCTGCACCAGCCCAGCCAGCCCA................................................................................GGGATCTAAGAAGTCGAAGAAATGAGCGTGATGAATTGTAAGGAGGGTTGGCGCTATGCCTACTTTTTGTCCTTGNTAGTATGGGCAGTTAGTATGGTTTGATCCCTTTGCCCTTTTTGGCCTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E604424" ref_strand="+" ref_description="SGN-E604424 [74559]">
      <seq>caaaatcgaaaatggtttcgttgaagctccagaagcggctcgccgctagtgtcctcaagtgtggaagaggaaaagtttggcttgatcctaatgaagggaatgaaatctccatggccaattcccgtcaaaacatcaggaaattggttaaggatggtttcatcatcaggaaaccaaccaaaattcactcaagatctcgtgctcgcagaatgaaggaggccaagaggaaaggccgtcactctggatatggtaagcgcaaaggtaccagggaggctagactgcctaccaaggtgctttggatgaggagattgagagtcctcaggcgtttgcttcgcaagtatagggaatcaaagaagattgacaaacacatgtatcatgacatgtacatgaaggtgaagggtaatgttttcaagaacaagcgtgtgctgatggaaaatatccacaagacaaaggctgagaaggctagagagaagaccttgtccgaccaatttgaggctaggagggcaaagaacaaggcaagcagagaaagaaagtttgcaaggagggaagaacgtttggctcagggaccaggaggagagaagccagtacaacaacctgcagcaccagctgctgccgcaccagcccagccagctcagggatctaagaaagtcgaagaaatgagcaagatgaattgtaaggaagggttggcgctatgcctacttttggtcttgtaagtatggcagtttagtatgttgatcccttccttttttgggctttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="65251" stop="62010"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64951" g_stop="64829" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="123" r_length="123" r_score="0.984"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64828" i_stop="63671" i_length="1158">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.955" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63670" g_stop="63548" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="124" r_stop="246" r_length="123" r_score="0.984"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63547" i_stop="63057" i_length="491">
            <donor d_prob="0.909" d_score="0.98"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="63056" g_stop="62743" g_length="314"/>
          <reference_exon_boundary r_type="cDNA" r_start="247" r_stop="560" r_length="314" r_score="0.994"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="62742" i_stop="62565" i_length="178">
            <donor d_prob="0.513" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.85"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="62564" g_stop="62497" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="561" r_stop="631" r_length="71" r_score="0.868"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="62496" i_stop="62417" i_length="80">
            <donor d_prob="1.000" d_score="0.81"/>
            <acceptor a_prob="0.924" a_score="0.88"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="62416" g_stop="62292" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="632" r_stop="754" r_length="123" r_score="0.888"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E604424" ref_strand="+">
        <total_alignment_score>0.961</total_alignment_score>
        <cumulative_length_of_scored_exons>753</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E604424" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64951" e_stop="64829"/>
          <exon e_start="63670" e_stop="63548"/>
          <exon e_start="63056" e_stop="62743"/>
          <exon e_start="62564" e_stop="62497"/>
          <exon e_start="62416" e_stop="62292"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCCGTATGTTTCTGTTTTCTGTTTGTTATCAATATCTATTTACGTTTATGCTATCTCTTTTAATCTCTTGTTTGTATGTTATGGCTTCTGATTGTGAAAGATCTATAGTAGGTTTTGATCAGTTTAGCTCCAACGATGCTTAGGTTATGTTACTTTATCGTTTCGCCGTCTTTTCTTGTGTGGAGTGTTTAATTTTGGAATTTGATCAACCGTAGTGTTGTTTTAACCACATATACTCTGATGTCGACCAGTTCAGATCCATAGAAGCATTGATTATTTGTGTTGAGGTTTTAGGTTTGGATTTTGATCAAACATTACAATGTTTCAACTGAATATACTGTTGAGGTATATTTTTGTCGTAGAGTTTGATCAGTTAAGCTCCAGTGTACCATAGATTAATTTACTGTTACTATCAATTTGCCTTTTGTTAGAGTTGCTGTTTTGAATTTGATCAGTATACTCCTTATGCATTGTTCACAAGATTAGCAGCATACTAATGTTTTTTTATTTATGTCTACTGTGTCAGCTTAGAGTGATATTTTTTAGGTTTTTGCATTGAAAACATATTTGTTTTTGGTAAACATGATTAACAAGGATGGTTGTTCTAGTGTTAAATGGATGCGAATAAACAATTATGCTGATTTTTTGGAAAACTGAAGATGTAGTGGATTGAAATTATTGGCAGATGTGGATAGGTTATGTGACAAGTTATATTTGCTGAAGTTTTTGAGTCGTGAGATTGAAATGTAATTGAGCTGTATATGTTCATTACAACACTGTCATTGTAATTTAATCAGTAATGATGATAGGTTACTAAACAGTGGGATGAATTAACTGCAATTATCTTTGTTATTGGTAGATGTCAATATGGAAAGATACCTATTTTGTGGGATTTCATTGGGTATGTTGTTGTATTGGCAGATATTTATTTGGTGTTGCTGCTTTGCGTTATTTGCCTCTTAATCTGATGTTTAGATGACAAAGTGATATTAATGTTTACTCAATCTAGATAACTAGAACATGTTTGCTGGAACAAGCTTATTGGTTGAGCTTGTGCAAGCCAGTTGCAATCCTTGTAGCTCTCCCTATGTCATTGTGCCAACTATTTTTTGTCATATTTCTATGAACTGCCCGTAATCCCTTCCTTTCCACTTAATACAGGTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATGGTACATCCTTGTCTTGACTGTGATTGCAGAAACTCATTTTTCATGCCCTAATTCAGTTTTTAGGTAGCTCTATCAGTTTGCTGTCAACCATTGGGCATTGGTTTTTTTCTTCTTCCAAATAGTCGTTAAAATGTTAGAAGGACTTGGATTTGATAACTCATTTCTCAATCATAATAGAGAAGAATATAAGAGGTGAACTTCCTATGAGAGTCTTTGGCCATAGATGTCATCTAGGCCAATTGAAGTGAGATACAGGAAATATAAGCCTATATTTAGTGTCACTTCATCTTTTTTGTCCTAACTAAATAGTTTTGTGTACTCCATACCTCAAGAAGTTATTTCAATGTAGGCACCTTTTTGGTTGCTTGGTTTGAAAGATTATCTTGCTCATATATTAACTGGCTAGAACTATGCCATTTCTCTCTTCTTTGTAACTAATGAATATTAGCAGGTGAAATTGCTCTGTTGGCTGATGTCTGTTCTTTTCTCAGGTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGAGAAGAACGTTTGGCTCAGGTATTGTTTGAAGCTCATTAAAATTTCTAGGGAAAAGTTGGCTCTGACACTTGATGGAGTGCTCTACTCTACTCCATGTTTTATGGTTTTAAGAAACGTTTCATGCAATTATGGGATTTTATGTCCTTTTAAATAACTGCATAGGATTTTTTCTCATCTTTTCTGTTTCAAATTTCAGGGACCAGGAGGAGAGAAGCCAGT---ACAACCTGCAGCACCAGCCGCTGCTGCACCAGCCCAGCCAGCCCAGTAAGTTCATCTGCTATATTAATTGTAGTTTCTCCTAGGGCCTAGTTTGAACATCATTTGATGAGAATATGTCTTTTCAGGGGATCTAAG-AAGTCGAAGAAATGAGCGTGATGAATTGTAAGG-AGGGTTGGCGCTATGCCTACTTTTTGTCCTTGTTAGTATGGCAGTTTAGTATGTTTGATCCCTTTGCCCTTTTTGGCCTTTT</genome_strand>
        <mrna_strand>CAAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGAAAAGTTTGGCTTGATCCTAATGAAGGGAATGAAATCTCCATGGCCAATTCCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCAAGATCTCGTGCTCGCAGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAGACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGGGAAGAACGTTTGGCTCAG..................................................................................................................................................................................GGACCAGGAGGAGAGAAGCCAGTACAACAACCTGCAGCACCAGCTGCTGCCGCACCAGCCCAGCCAGCTCA................................................................................GGGATCTAAGAAAGTCGAAGAAATGAGCAAGATGAATTGTAAGGAAGGGTTGGCGCTATGCCTACTTTTGGT-CTTGTAAGTATGGCAGTTTAGTATG-TTGATCCC-TT-CCTTTTTTGGGCTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E347468" ref_strand="+" ref_description="SGN-E347468 [cTOF-33-P11]">
      <seq>aaaatcgaaaatggtttcgttgaagctccagaagcggctcgccgctagtgtcctcaagtgtggaagaggcaaagtttggcttgatcctaatgaaggcaatgaaatctccatggccaattcccgtcaaaacatcaggaaattggttaaggatggtttcatcatcaggaaaccaaccaaaattcactcgagatctcgtgctcgccgaatgaaggaggccaagaggaaaggccgtcactctggatatggtaagcgcaaaggtaccagggaggctagactgcctaccaaggtgctttggatgaggagattgagagtcctcaggcgtttgcttcgcaagtatagggaatcaaagaagattgacaaacacatgtatcatgacatgtacatgaaggtgaagggtaatgttttcaagacaagncgtgtgctgatggaaaatatccacaagacaaaggctgagaaggctagagagaaaaccttgtccgaccaatttgaggctaggagggcaaagaacaaggcaagcagagaaagaaagtttgcaaggagagaagaacgtttggctcagggaccaggaggagagaagccagtacaacctgcagcaccagccgctgctgcaccagcccagccagcccagggatctaagaagtcgaagaaatgagcgtgatgaattgtaaggagggttggcgctatgcctactttttgtccttgttagtatggcagtttagtatgttttgatccctttgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="65250" stop="62007"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64950" g_stop="64829" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="122" r_length="122" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64828" i_stop="63671" i_length="1158">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.955" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63670" g_stop="63548" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="123" r_stop="245" r_length="123" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63547" i_stop="63057" i_length="491">
            <donor d_prob="0.909" d_score="1.00"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="63056" g_stop="62743" g_length="314"/>
          <reference_exon_boundary r_type="cDNA" r_start="246" r_stop="559" r_length="314" r_score="0.990"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="62742" i_stop="62565" i_length="178">
            <donor d_prob="0.513" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="62564" g_stop="62497" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="560" r_stop="627" r_length="68" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="62496" i_stop="62417" i_length="80">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.924" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="62416" g_stop="62307" g_length="110"/>
          <reference_exon_boundary r_type="cDNA" r_start="628" r_stop="738" r_length="111" r_score="0.982"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E347468" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>737</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E347468" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64950" e_stop="64829"/>
          <exon e_start="63670" e_stop="63548"/>
          <exon e_start="63056" e_stop="62743"/>
          <exon e_start="62564" e_stop="62497"/>
          <exon e_start="62416" e_stop="62307"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCCGTATGTTTCTGTTTTCTGTTTGTTATCAATATCTATTTACGTTTATGCTATCTCTTTTAATCTCTTGTTTGTATGTTATGGCTTCTGATTGTGAAAGATCTATAGTAGGTTTTGATCAGTTTAGCTCCAACGATGCTTAGGTTATGTTACTTTATCGTTTCGCCGTCTTTTCTTGTGTGGAGTGTTTAATTTTGGAATTTGATCAACCGTAGTGTTGTTTTAACCACATATACTCTGATGTCGACCAGTTCAGATCCATAGAAGCATTGATTATTTGTGTTGAGGTTTTAGGTTTGGATTTTGATCAAACATTACAATGTTTCAACTGAATATACTGTTGAGGTATATTTTTGTCGTAGAGTTTGATCAGTTAAGCTCCAGTGTACCATAGATTAATTTACTGTTACTATCAATTTGCCTTTTGTTAGAGTTGCTGTTTTGAATTTGATCAGTATACTCCTTATGCATTGTTCACAAGATTAGCAGCATACTAATGTTTTTTTATTTATGTCTACTGTGTCAGCTTAGAGTGATATTTTTTAGGTTTTTGCATTGAAAACATATTTGTTTTTGGTAAACATGATTAACAAGGATGGTTGTTCTAGTGTTAAATGGATGCGAATAAACAATTATGCTGATTTTTTGGAAAACTGAAGATGTAGTGGATTGAAATTATTGGCAGATGTGGATAGGTTATGTGACAAGTTATATTTGCTGAAGTTTTTGAGTCGTGAGATTGAAATGTAATTGAGCTGTATATGTTCATTACAACACTGTCATTGTAATTTAATCAGTAATGATGATAGGTTACTAAACAGTGGGATGAATTAACTGCAATTATCTTTGTTATTGGTAGATGTCAATATGGAAAGATACCTATTTTGTGGGATTTCATTGGGTATGTTGTTGTATTGGCAGATATTTATTTGGTGTTGCTGCTTTGCGTTATTTGCCTCTTAATCTGATGTTTAGATGACAAAGTGATATTAATGTTTACTCAATCTAGATAACTAGAACATGTTTGCTGGAACAAGCTTATTGGTTGAGCTTGTGCAAGCCAGTTGCAATCCTTGTAGCTCTCCCTATGTCATTGTGCCAACTATTTTTTGTCATATTTCTATGAACTGCCCGTAATCCCTTCCTTTCCACTTAATACAGGTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATGGTACATCCTTGTCTTGACTGTGATTGCAGAAACTCATTTTTCATGCCCTAATTCAGTTTTTAGGTAGCTCTATCAGTTTGCTGTCAACCATTGGGCATTGGTTTTTTTCTTCTTCCAAATAGTCGTTAAAATGTTAGAAGGACTTGGATTTGATAACTCATTTCTCAATCATAATAGAGAAGAATATAAGAGGTGAACTTCCTATGAGAGTCTTTGGCCATAGATGTCATCTAGGCCAATTGAAGTGAGATACAGGAAATATAAGCCTATATTTAGTGTCACTTCATCTTTTTTGTCCTAACTAAATAGTTTTGTGTACTCCATACCTCAAGAAGTTATTTCAATGTAGGCACCTTTTTGGTTGCTTGGTTTGAAAGATTATCTTGCTCATATATTAACTGGCTAGAACTATGCCATTTCTCTCTTCTTTGTAACTAATGAATATTAGCAGGTGAAATTGCTCTGTTGGCTGATGTCTGTTCTTTTCTCAGGTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAG-CGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGAGAAGAACGTTTGGCTCAGGTATTGTTTGAAGCTCATTAAAATTTCTAGGGAAAAGTTGGCTCTGACACTTGATGGAGTGCTCTACTCTACTCCATGTTTTATGGTTTTAAGAAACGTTTCATGCAATTATGGGATTTTATGTCCTTTTAAATAACTGCATAGGATTTTTTCTCATCTTTTCTGTTTCAAATTTCAGGGACCAGGAGGAGAGAAGCCAGTACAACCTGCAGCACCAGCCGCTGCTGCACCAGCCCAGCCAGCCCAGTAAGTTCATCTGCTATATTAATTGTAGTTTCTCCTAGGGCCTAGTTTGAACATCATTTGATGAGAATATGTCTTTTCAGGGGATCTAAGAAGTCGAAGAAATGAGCGTGATGAATTGTAAGGAGGGTTGGCGCTATGCCTACTTTTTGTCCTTGTTAGTATGGCAGTTTAGTATG-TTTGATCCCTTTGC</genome_strand>
        <mrna_strand>AAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAG-ACAAGNCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGAGAAGAACGTTTGGCTCAG..................................................................................................................................................................................GGACCAGGAGGAGAGAAGCCAGTACAACCTGCAGCACCAGCCGCTGCTGCACCAGCCCAGCCAGCCCA................................................................................GGGATCTAAGAAGTCGAAGAAATGAGCGTGATGAATTGTAAGGAGGGTTGGCGCTATGCCTACTTTTTGTCCTTGTTAGTATGGCAGTTTAGTATGTTTTGATCCCTTTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E345183" ref_strand="+" ref_description="SGN-E345183 [cTOF-13-C21]">
      <seq>agcttcacaaaatcgaaaatggtttcgttgaagctccagaagcggctcgccgctagtgtcctcaagtgtggaagaggcaaagtttggcttgatcctaatgaaggcaatgaaatctccatggccaattcccgtcaaaacatcaggaaattggttaaggatggtttcatcatcaggaaaccaaccaaaattcactcgagatctcgtgctcgccgaatgaaggaggccaagaggaaaggccgtcactctggatatggtaagcgcaaaggtaccagggaggctagactgcctaccaaggtgctttggatgaggagattgagagtcctcaggcgtttgcttcgcaagtatagggaatcaaagaagattgacaaacacatgtatcatgacatgtacatgaaggtgaagggtaatgttttcaagaacaagcgtgtgctgatggaaaatatccacaagacaaaggctgagaaggctagagagaaaaccttgtccgaccaatttgaggctaggagggcaaagaacaaggcaagcagagaaagaaagtttgcaaggagagaagaacgtttggctcagggaccaggaggagagaagccagtacaacctgcagcaccagccgctgctgcaccagcccagccagcccanggatctaagaagtcgaagaaatgagcgtgatgaattgtagggagggttggcgctatgcctactttttgtccttgntagtatggcaggttagtatggtttgatccctttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="65258" stop="62008"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64958" g_stop="64829" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="130" r_length="130" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64828" i_stop="63671" i_length="1158">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.955" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63670" g_stop="63548" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="131" r_stop="253" r_length="123" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63547" i_stop="63057" i_length="491">
            <donor d_prob="0.909" d_score="1.00"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="63056" g_stop="62743" g_length="314"/>
          <reference_exon_boundary r_type="cDNA" r_start="254" r_stop="567" r_length="314" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="62742" i_stop="62565" i_length="178">
            <donor d_prob="0.513" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="62564" g_stop="62497" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="568" r_stop="635" r_length="68" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="62496" i_stop="62417" i_length="80">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.924" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="62416" g_stop="62308" g_length="109"/>
          <reference_exon_boundary r_type="cDNA" r_start="636" r_stop="745" r_length="110" r_score="0.945"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E345183" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>744</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E345183" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64958" e_stop="64829"/>
          <exon e_start="63670" e_stop="63548"/>
          <exon e_start="63056" e_stop="62743"/>
          <exon e_start="62564" e_stop="62497"/>
          <exon e_start="62416" e_stop="62308"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGCTTCACAAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCCGTATGTTTCTGTTTTCTGTTTGTTATCAATATCTATTTACGTTTATGCTATCTCTTTTAATCTCTTGTTTGTATGTTATGGCTTCTGATTGTGAAAGATCTATAGTAGGTTTTGATCAGTTTAGCTCCAACGATGCTTAGGTTATGTTACTTTATCGTTTCGCCGTCTTTTCTTGTGTGGAGTGTTTAATTTTGGAATTTGATCAACCGTAGTGTTGTTTTAACCACATATACTCTGATGTCGACCAGTTCAGATCCATAGAAGCATTGATTATTTGTGTTGAGGTTTTAGGTTTGGATTTTGATCAAACATTACAATGTTTCAACTGAATATACTGTTGAGGTATATTTTTGTCGTAGAGTTTGATCAGTTAAGCTCCAGTGTACCATAGATTAATTTACTGTTACTATCAATTTGCCTTTTGTTAGAGTTGCTGTTTTGAATTTGATCAGTATACTCCTTATGCATTGTTCACAAGATTAGCAGCATACTAATGTTTTTTTATTTATGTCTACTGTGTCAGCTTAGAGTGATATTTTTTAGGTTTTTGCATTGAAAACATATTTGTTTTTGGTAAACATGATTAACAAGGATGGTTGTTCTAGTGTTAAATGGATGCGAATAAACAATTATGCTGATTTTTTGGAAAACTGAAGATGTAGTGGATTGAAATTATTGGCAGATGTGGATAGGTTATGTGACAAGTTATATTTGCTGAAGTTTTTGAGTCGTGAGATTGAAATGTAATTGAGCTGTATATGTTCATTACAACACTGTCATTGTAATTTAATCAGTAATGATGATAGGTTACTAAACAGTGGGATGAATTAACTGCAATTATCTTTGTTATTGGTAGATGTCAATATGGAAAGATACCTATTTTGTGGGATTTCATTGGGTATGTTGTTGTATTGGCAGATATTTATTTGGTGTTGCTGCTTTGCGTTATTTGCCTCTTAATCTGATGTTTAGATGACAAAGTGATATTAATGTTTACTCAATCTAGATAACTAGAACATGTTTGCTGGAACAAGCTTATTGGTTGAGCTTGTGCAAGCCAGTTGCAATCCTTGTAGCTCTCCCTATGTCATTGTGCCAACTATTTTTTGTCATATTTCTATGAACTGCCCGTAATCCCTTCCTTTCCACTTAATACAGGTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATGGTACATCCTTGTCTTGACTGTGATTGCAGAAACTCATTTTTCATGCCCTAATTCAGTTTTTAGGTAGCTCTATCAGTTTGCTGTCAACCATTGGGCATTGGTTTTTTTCTTCTTCCAAATAGTCGTTAAAATGTTAGAAGGACTTGGATTTGATAACTCATTTCTCAATCATAATAGAGAAGAATATAAGAGGTGAACTTCCTATGAGAGTCTTTGGCCATAGATGTCATCTAGGCCAATTGAAGTGAGATACAGGAAATATAAGCCTATATTTAGTGTCACTTCATCTTTTTTGTCCTAACTAAATAGTTTTGTGTACTCCATACCTCAAGAAGTTATTTCAATGTAGGCACCTTTTTGGTTGCTTGGTTTGAAAGATTATCTTGCTCATATATTAACTGGCTAGAACTATGCCATTTCTCTCTTCTTTGTAACTAATGAATATTAGCAGGTGAAATTGCTCTGTTGGCTGATGTCTGTTCTTTTCTCAGGTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGAGAAGAACGTTTGGCTCAGGTATTGTTTGAAGCTCATTAAAATTTCTAGGGAAAAGTTGGCTCTGACACTTGATGGAGTGCTCTACTCTACTCCATGTTTTATGGTTTTAAGAAACGTTTCATGCAATTATGGGATTTTATGTCCTTTTAAATAACTGCATAGGATTTTTTCTCATCTTTTCTGTTTCAAATTTCAGGGACCAGGAGGAGAGAAGCCAGTACAACCTGCAGCACCAGCCGCTGCTGCACCAGCCCAGCCAGCCCAGTAAGTTCATCTGCTATATTAATTGTAGTTTCTCCTAGGGCCTAGTTTGAACATCATTTGATGAGAATATGTCTTTTCAGGGGATCTAAGAAGTCGAAGAAATGAGCGTGATGAATTGTAAGGAGGGTTGGCGCTATGCCTACTTTTTGTCCTTGTTAGTATGGCAGTTTAGTAT-GTTTGATCCCTTTG</genome_strand>
        <mrna_strand>AGCTTCACAAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGAGAAGAACGTTTGGCTCAG..................................................................................................................................................................................GGACCAGGAGGAGAGAAGCCAGTACAACCTGCAGCACCAGCCGCTGCTGCACCAGCCCAGCCAGCCCA................................................................................NGGATCTAAGAAGTCGAAGAAATGAGCGTGATGAATTGTAGGGAGGGTTGGCGCTATGCCTACTTTTTGTCCTTGNTAGTATGGCAGGTTAGTATGGTTTGATCCCTTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E591997" ref_strand="+" ref_description="SGN-E591997 [45721]">
      <seq>tgcaaaatcgaaaatggtttcgttgaagctccagaagcggctcgccgctagtgtcctcaagtgtggaagaggcaaagtttggcttgatcctaatgaggggaatgaaatctccatggccaattcccgccaaaacatcaggaaattggtgaaggatggtttcatcatcaggaaaccaaccaaaattcactcaagatctcgtgctcgcagaatgaaggaggccaagaggaaaggccgtcactctggatatggtaagcgcaaaggtaccagggaggctagactgcctaccaaggtgctttggatgaggagattgagagtcctcaggcgtttgcttcgcaagtatagggaatcaaagaagattgacaaacacatgtatcatgacatgtacatgaaggtgaagggtaatgttttcaagaacaagcgtgtgctgatggaaaatatccacaagacaaaggctgagaaggctagagagaagaccttgtccgaccaatttgaggctaggagggcaaagaacaaggcaagcagagaaagaaagtttgcaaggagggaagaacgtttggctcagggaccaggaggagagaagccagtacaacaacctgcagcaccagccgctgccgctccagcccagccagctcagggatccaagaagtcgaagaaatgagcatgatgaatttttaggagggttggcgccatgcctactttttgtccttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="65251" stop="62042"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64953" g_stop="64829" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="125" r_length="125" r_score="0.968"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64828" i_stop="63671" i_length="1158">
            <donor d_prob="0.998" d_score="0.96"/>
            <acceptor a_prob="0.955" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63670" g_stop="63548" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="126" r_stop="248" r_length="123" r_score="0.967"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63547" i_stop="63057" i_length="491">
            <donor d_prob="0.909" d_score="0.98"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="63056" g_stop="62743" g_length="314"/>
          <reference_exon_boundary r_type="cDNA" r_start="249" r_stop="562" r_length="314" r_score="0.994"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="62742" i_stop="62565" i_length="178">
            <donor d_prob="0.513" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.87"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="62564" g_stop="62497" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="563" r_stop="633" r_length="71" r_score="0.868"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="62496" i_stop="62417" i_length="80">
            <donor d_prob="1.000" d_score="0.81"/>
            <acceptor a_prob="0.924" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="62416" g_stop="62342" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="634" r_stop="708" r_length="75" r_score="0.933"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E591997" ref_strand="+">
        <total_alignment_score>0.966</total_alignment_score>
        <cumulative_length_of_scored_exons>705</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E591997" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64953" e_stop="64829"/>
          <exon e_start="63670" e_stop="63548"/>
          <exon e_start="63056" e_stop="62743"/>
          <exon e_start="62564" e_stop="62497"/>
          <exon e_start="62416" e_stop="62342"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CACAAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCCGTATGTTTCTGTTTTCTGTTTGTTATCAATATCTATTTACGTTTATGCTATCTCTTTTAATCTCTTGTTTGTATGTTATGGCTTCTGATTGTGAAAGATCTATAGTAGGTTTTGATCAGTTTAGCTCCAACGATGCTTAGGTTATGTTACTTTATCGTTTCGCCGTCTTTTCTTGTGTGGAGTGTTTAATTTTGGAATTTGATCAACCGTAGTGTTGTTTTAACCACATATACTCTGATGTCGACCAGTTCAGATCCATAGAAGCATTGATTATTTGTGTTGAGGTTTTAGGTTTGGATTTTGATCAAACATTACAATGTTTCAACTGAATATACTGTTGAGGTATATTTTTGTCGTAGAGTTTGATCAGTTAAGCTCCAGTGTACCATAGATTAATTTACTGTTACTATCAATTTGCCTTTTGTTAGAGTTGCTGTTTTGAATTTGATCAGTATACTCCTTATGCATTGTTCACAAGATTAGCAGCATACTAATGTTTTTTTATTTATGTCTACTGTGTCAGCTTAGAGTGATATTTTTTAGGTTTTTGCATTGAAAACATATTTGTTTTTGGTAAACATGATTAACAAGGATGGTTGTTCTAGTGTTAAATGGATGCGAATAAACAATTATGCTGATTTTTTGGAAAACTGAAGATGTAGTGGATTGAAATTATTGGCAGATGTGGATAGGTTATGTGACAAGTTATATTTGCTGAAGTTTTTGAGTCGTGAGATTGAAATGTAATTGAGCTGTATATGTTCATTACAACACTGTCATTGTAATTTAATCAGTAATGATGATAGGTTACTAAACAGTGGGATGAATTAACTGCAATTATCTTTGTTATTGGTAGATGTCAATATGGAAAGATACCTATTTTGTGGGATTTCATTGGGTATGTTGTTGTATTGGCAGATATTTATTTGGTGTTGCTGCTTTGCGTTATTTGCCTCTTAATCTGATGTTTAGATGACAAAGTGATATTAATGTTTACTCAATCTAGATAACTAGAACATGTTTGCTGGAACAAGCTTATTGGTTGAGCTTGTGCAAGCCAGTTGCAATCCTTGTAGCTCTCCCTATGTCATTGTGCCAACTATTTTTTGTCATATTTCTATGAACTGCCCGTAATCCCTTCCTTTCCACTTAATACAGGTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATGGTACATCCTTGTCTTGACTGTGATTGCAGAAACTCATTTTTCATGCCCTAATTCAGTTTTTAGGTAGCTCTATCAGTTTGCTGTCAACCATTGGGCATTGGTTTTTTTCTTCTTCCAAATAGTCGTTAAAATGTTAGAAGGACTTGGATTTGATAACTCATTTCTCAATCATAATAGAGAAGAATATAAGAGGTGAACTTCCTATGAGAGTCTTTGGCCATAGATGTCATCTAGGCCAATTGAAGTGAGATACAGGAAATATAAGCCTATATTTAGTGTCACTTCATCTTTTTTGTCCTAACTAAATAGTTTTGTGTACTCCATACCTCAAGAAGTTATTTCAATGTAGGCACCTTTTTGGTTGCTTGGTTTGAAAGATTATCTTGCTCATATATTAACTGGCTAGAACTATGCCATTTCTCTCTTCTTTGTAACTAATGAATATTAGCAGGTGAAATTGCTCTGTTGGCTGATGTCTGTTCTTTTCTCAGGTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGAGAAGAACGTTTGGCTCAGGTATTGTTTGAAGCTCATTAAAATTTCTAGGGAAAAGTTGGCTCTGACACTTGATGGAGTGCTCTACTCTACTCCATGTTTTATGGTTTTAAGAAACGTTTCATGCAATTATGGGATTTTATGTCCTTTTAAATAACTGCATAGGATTTTTTCTCATCTTTTCTGTTTCAAATTTCAGGGACCAGGAGGAGAGAAGCCAGT---ACAACCTGCAGCACCAGCCGCTGCTGCACCAGCCCAGCCAGCCCAGTAAGTTCATCTGCTATATTAATTGTAGTTTCTCCTAGGGCCTAGTTTGAACATCATTTGATGAGAATATGTCTTTTCAGGGGATCTAAGAAGTCGAAGAAATGAGCGTGATGAATTGTAAGGAGGGTTGGCGCTATGCCTACTTTTTGTCCTTG</genome_strand>
        <mrna_strand>TGCAAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAGGGGAATGAAATCTCCATGGCCAATTCCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCAAAACATCAGGAAATTGGTGAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCAAGATCTCGTGCTCGCAGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAGACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGGGAAGAACGTTTGGCTCAG..................................................................................................................................................................................GGACCAGGAGGAGAGAAGCCAGTACAACAACCTGCAGCACCAGCCGCTGCCGCTCCAGCCCAGCCAGCTCA................................................................................GGGATCCAAGAAGTCGAAGAAATGAGCATGATGAATTTTTAGGAGGGTTGGCGCCATGCCTACTTTTTGTCCTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E391050" ref_strand="+" ref_description="SGN-E391050 [TUS-47-P21]">
      <seq>cgccgctagtgtcctcaagtgtggaagaggcaaagtttggcttgatcctaatgaaggcaatgaaatctccatggccaattcccgtcaaaacatcaggaaattggttaaggatggtttcatcatcaggaaaccaaccaaaattcactcgagatctcgtgctcgccgaatgaaggaggccaagaggaaaggccgtcactctggatatggtaagcgcaaaggtaccagggaggctagactgcctaccaaggtgctttggatgaggagattgagagtcctcaggcgtttgcttcgcaagtatagggaatcaaagaagattgacaaacacatgtatcatgacatgtacatgaaggtgaagggtaatgttttcaagaacaagcgtgtgctgatggaaaatatccacaagacaaaggctgagaaggctagagagaaaaccttgtccgaccaatttgaggctaggagggcaaagaacaaggcaagcagagaaagaaagtttgcaaggagagaagaacgtttggctcagggaccaggaggagagaagccagtacaacctgcagcaccagccgctgctgcaccagcccagccagcccagggatctaagaagtcgaagaaatgagcgtgatgaattgtaangagggttggcgctatgcctactttttgtccttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="65211" stop="62042"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64911" g_stop="64829" g_length="83"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="83" r_length="83" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64828" i_stop="63671" i_length="1158">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.955" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63670" g_stop="63548" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="84" r_stop="206" r_length="123" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63547" i_stop="63057" i_length="491">
            <donor d_prob="0.909" d_score="1.00"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="63056" g_stop="62743" g_length="314"/>
          <reference_exon_boundary r_type="cDNA" r_start="207" r_stop="520" r_length="314" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="62742" i_stop="62565" i_length="178">
            <donor d_prob="0.513" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="62564" g_stop="62497" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="521" r_stop="588" r_length="68" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="62496" i_stop="62417" i_length="80">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.924" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="62416" g_stop="62342" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="589" r_stop="663" r_length="75" r_score="0.987"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E391050" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>663</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E391050" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64911" e_stop="64829"/>
          <exon e_start="63670" e_stop="63548"/>
          <exon e_start="63056" e_stop="62743"/>
          <exon e_start="62564" e_stop="62497"/>
          <exon e_start="62416" e_stop="62342"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCCGTATGTTTCTGTTTTCTGTTTGTTATCAATATCTATTTACGTTTATGCTATCTCTTTTAATCTCTTGTTTGTATGTTATGGCTTCTGATTGTGAAAGATCTATAGTAGGTTTTGATCAGTTTAGCTCCAACGATGCTTAGGTTATGTTACTTTATCGTTTCGCCGTCTTTTCTTGTGTGGAGTGTTTAATTTTGGAATTTGATCAACCGTAGTGTTGTTTTAACCACATATACTCTGATGTCGACCAGTTCAGATCCATAGAAGCATTGATTATTTGTGTTGAGGTTTTAGGTTTGGATTTTGATCAAACATTACAATGTTTCAACTGAATATACTGTTGAGGTATATTTTTGTCGTAGAGTTTGATCAGTTAAGCTCCAGTGTACCATAGATTAATTTACTGTTACTATCAATTTGCCTTTTGTTAGAGTTGCTGTTTTGAATTTGATCAGTATACTCCTTATGCATTGTTCACAAGATTAGCAGCATACTAATGTTTTTTTATTTATGTCTACTGTGTCAGCTTAGAGTGATATTTTTTAGGTTTTTGCATTGAAAACATATTTGTTTTTGGTAAACATGATTAACAAGGATGGTTGTTCTAGTGTTAAATGGATGCGAATAAACAATTATGCTGATTTTTTGGAAAACTGAAGATGTAGTGGATTGAAATTATTGGCAGATGTGGATAGGTTATGTGACAAGTTATATTTGCTGAAGTTTTTGAGTCGTGAGATTGAAATGTAATTGAGCTGTATATGTTCATTACAACACTGTCATTGTAATTTAATCAGTAATGATGATAGGTTACTAAACAGTGGGATGAATTAACTGCAATTATCTTTGTTATTGGTAGATGTCAATATGGAAAGATACCTATTTTGTGGGATTTCATTGGGTATGTTGTTGTATTGGCAGATATTTATTTGGTGTTGCTGCTTTGCGTTATTTGCCTCTTAATCTGATGTTTAGATGACAAAGTGATATTAATGTTTACTCAATCTAGATAACTAGAACATGTTTGCTGGAACAAGCTTATTGGTTGAGCTTGTGCAAGCCAGTTGCAATCCTTGTAGCTCTCCCTATGTCATTGTGCCAACTATTTTTTGTCATATTTCTATGAACTGCCCGTAATCCCTTCCTTTCCACTTAATACAGGTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATGGTACATCCTTGTCTTGACTGTGATTGCAGAAACTCATTTTTCATGCCCTAATTCAGTTTTTAGGTAGCTCTATCAGTTTGCTGTCAACCATTGGGCATTGGTTTTTTTCTTCTTCCAAATAGTCGTTAAAATGTTAGAAGGACTTGGATTTGATAACTCATTTCTCAATCATAATAGAGAAGAATATAAGAGGTGAACTTCCTATGAGAGTCTTTGGCCATAGATGTCATCTAGGCCAATTGAAGTGAGATACAGGAAATATAAGCCTATATTTAGTGTCACTTCATCTTTTTTGTCCTAACTAAATAGTTTTGTGTACTCCATACCTCAAGAAGTTATTTCAATGTAGGCACCTTTTTGGTTGCTTGGTTTGAAAGATTATCTTGCTCATATATTAACTGGCTAGAACTATGCCATTTCTCTCTTCTTTGTAACTAATGAATATTAGCAGGTGAAATTGCTCTGTTGGCTGATGTCTGTTCTTTTCTCAGGTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGAGAAGAACGTTTGGCTCAGGTATTGTTTGAAGCTCATTAAAATTTCTAGGGAAAAGTTGGCTCTGACACTTGATGGAGTGCTCTACTCTACTCCATGTTTTATGGTTTTAAGAAACGTTTCATGCAATTATGGGATTTTATGTCCTTTTAAATAACTGCATAGGATTTTTTCTCATCTTTTCTGTTTCAAATTTCAGGGACCAGGAGGAGAGAAGCCAGTACAACCTGCAGCACCAGCCGCTGCTGCACCAGCCCAGCCAGCCCAGTAAGTTCATCTGCTATATTAATTGTAGTTTCTCCTAGGGCCTAGTTTGAACATCATTTGATGAGAATATGTCTTTTCAGGGGATCTAAGAAGTCGAAGAAATGAGCGTGATGAATTGTAAGGAGGGTTGGCGCTATGCCTACTTTTTGTCCTTG</genome_strand>
        <mrna_strand>CGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGAGAAGAACGTTTGGCTCAG..................................................................................................................................................................................GGACCAGGAGGAGAGAAGCCAGTACAACCTGCAGCACCAGCCGCTGCTGCACCAGCCCAGCCAGCCCA................................................................................GGGATCTAAGAAGTCGAAGAAATGAGCGTGATGAATTGTAANGAGGGTTGGCGCTATGCCTACTTTTTGTCCTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E343260" ref_strand="+" ref_description="SGN-E343260 [cTOF-17-M12]">
      <seq>cttcacaaaatcgaaaatggtttcgttgaagctccagaagcggctcgccgctagtgtcctcaagtgtggaagaggcaaagtttggcttgatcctaatgaaggcaatgaaatctccatggccaattcccgtcaaaacatcaggaaattggttaaggatggtttcatcatcaggaaaccaaccaaaattcactcgagatctcgtgctcgccgaatgaaggaggccaagaggaaaggccgtcactctggatatggtaagcgcaaaggtaccagggaggctagactgcctaccaaggtgctttggatgaggagattgagagtcctcaggcgtttgcttcgcaagtatagggaatcaaagaagattgacaaacacatgtatcatgacatgtacatgaaggtgaagggtaatgttttcaagaacaagcgtgtgctgatggaaaatatccacaagacaaaggctgagaaggctagagagaaaaccttgtccgaccaatttgaggctaggagggcaaagaacaaggcaagcagagaaagaaagtttgcaaggagagaagaacgtttggctcagggaccaggaggagagaagccagtacaacctgcagcaccagccgctgctgcaccagcccagccagcccagggatctaagaagtcgaagaatgagcgtgatgaattgtagggagggttggcgctatgcctacttttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="65256" stop="62049"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64956" g_stop="64829" g_length="128"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="128" r_length="128" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64828" i_stop="63671" i_length="1158">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.955" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63670" g_stop="63548" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="129" r_stop="251" r_length="123" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63547" i_stop="63057" i_length="491">
            <donor d_prob="0.909" d_score="1.00"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="63056" g_stop="62743" g_length="314"/>
          <reference_exon_boundary r_type="cDNA" r_start="252" r_stop="565" r_length="314" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="62742" i_stop="62565" i_length="178">
            <donor d_prob="0.513" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="62564" g_stop="62497" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="566" r_stop="633" r_length="68" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="62496" i_stop="62417" i_length="80">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.924" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="62416" g_stop="62349" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="634" r_stop="700" r_length="67" r_score="0.971"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E343260" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>701</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E343260" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64956" e_stop="64829"/>
          <exon e_start="63670" e_stop="63548"/>
          <exon e_start="63056" e_stop="62743"/>
          <exon e_start="62564" e_stop="62497"/>
          <exon e_start="62416" e_stop="62349"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTCACAAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCCGTATGTTTCTGTTTTCTGTTTGTTATCAATATCTATTTACGTTTATGCTATCTCTTTTAATCTCTTGTTTGTATGTTATGGCTTCTGATTGTGAAAGATCTATAGTAGGTTTTGATCAGTTTAGCTCCAACGATGCTTAGGTTATGTTACTTTATCGTTTCGCCGTCTTTTCTTGTGTGGAGTGTTTAATTTTGGAATTTGATCAACCGTAGTGTTGTTTTAACCACATATACTCTGATGTCGACCAGTTCAGATCCATAGAAGCATTGATTATTTGTGTTGAGGTTTTAGGTTTGGATTTTGATCAAACATTACAATGTTTCAACTGAATATACTGTTGAGGTATATTTTTGTCGTAGAGTTTGATCAGTTAAGCTCCAGTGTACCATAGATTAATTTACTGTTACTATCAATTTGCCTTTTGTTAGAGTTGCTGTTTTGAATTTGATCAGTATACTCCTTATGCATTGTTCACAAGATTAGCAGCATACTAATGTTTTTTTATTTATGTCTACTGTGTCAGCTTAGAGTGATATTTTTTAGGTTTTTGCATTGAAAACATATTTGTTTTTGGTAAACATGATTAACAAGGATGGTTGTTCTAGTGTTAAATGGATGCGAATAAACAATTATGCTGATTTTTTGGAAAACTGAAGATGTAGTGGATTGAAATTATTGGCAGATGTGGATAGGTTATGTGACAAGTTATATTTGCTGAAGTTTTTGAGTCGTGAGATTGAAATGTAATTGAGCTGTATATGTTCATTACAACACTGTCATTGTAATTTAATCAGTAATGATGATAGGTTACTAAACAGTGGGATGAATTAACTGCAATTATCTTTGTTATTGGTAGATGTCAATATGGAAAGATACCTATTTTGTGGGATTTCATTGGGTATGTTGTTGTATTGGCAGATATTTATTTGGTGTTGCTGCTTTGCGTTATTTGCCTCTTAATCTGATGTTTAGATGACAAAGTGATATTAATGTTTACTCAATCTAGATAACTAGAACATGTTTGCTGGAACAAGCTTATTGGTTGAGCTTGTGCAAGCCAGTTGCAATCCTTGTAGCTCTCCCTATGTCATTGTGCCAACTATTTTTTGTCATATTTCTATGAACTGCCCGTAATCCCTTCCTTTCCACTTAATACAGGTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATGGTACATCCTTGTCTTGACTGTGATTGCAGAAACTCATTTTTCATGCCCTAATTCAGTTTTTAGGTAGCTCTATCAGTTTGCTGTCAACCATTGGGCATTGGTTTTTTTCTTCTTCCAAATAGTCGTTAAAATGTTAGAAGGACTTGGATTTGATAACTCATTTCTCAATCATAATAGAGAAGAATATAAGAGGTGAACTTCCTATGAGAGTCTTTGGCCATAGATGTCATCTAGGCCAATTGAAGTGAGATACAGGAAATATAAGCCTATATTTAGTGTCACTTCATCTTTTTTGTCCTAACTAAATAGTTTTGTGTACTCCATACCTCAAGAAGTTATTTCAATGTAGGCACCTTTTTGGTTGCTTGGTTTGAAAGATTATCTTGCTCATATATTAACTGGCTAGAACTATGCCATTTCTCTCTTCTTTGTAACTAATGAATATTAGCAGGTGAAATTGCTCTGTTGGCTGATGTCTGTTCTTTTCTCAGGTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGAGAAGAACGTTTGGCTCAGGTATTGTTTGAAGCTCATTAAAATTTCTAGGGAAAAGTTGGCTCTGACACTTGATGGAGTGCTCTACTCTACTCCATGTTTTATGGTTTTAAGAAACGTTTCATGCAATTATGGGATTTTATGTCCTTTTAAATAACTGCATAGGATTTTTTCTCATCTTTTCTGTTTCAAATTTCAGGGACCAGGAGGAGAGAAGCCAGTACAACCTGCAGCACCAGCCGCTGCTGCACCAGCCCAGCCAGCCCAGTAAGTTCATCTGCTATATTAATTGTAGTTTCTCCTAGGGCCTAGTTTGAACATCATTTGATGAGAATATGTCTTTTCAGGGGATCTAAGAAGTCGAAGAAATGAGCGTGATGAATTGTAAGGAGGGTTGGCGCTATGCCTACTTTTT</genome_strand>
        <mrna_strand>CTTCACAAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGAGAAGAACGTTTGGCTCAG..................................................................................................................................................................................GGACCAGGAGGAGAGAAGCCAGTACAACCTGCAGCACCAGCCGCTGCTGCACCAGCCCAGCCAGCCCA................................................................................GGGATCTAAGAAGTCGAAG-AATGAGCGTGATGAATTGTAGGGAGGGTTGGCGCTATGCCTACTTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E455504" ref_strand="+" ref_description="SGN-E455504 [cSTS-26-B9]">
      <seq>acaaaatcgaaaatggtttcgttgaagctccagaagcggctcgccgctagtgtcctcaagtgtggaagaaggaaaagtttggcttgatcctaatgaagggaatgaaatctccatggccaattcccgtcaaaacatcaggaaattggttaaggatggtttcatcatcaggaaaccaaccaaaattcactcaagatctcgtgctcgcagaatgaaggaggccaagaggaaaggccgtcactctggatatggtaagcgcaaaggtaccagggaggctagactgcctaccaaggtgctttggatgaggagattgagagtcctcaggcgtttgcttcgcaagtatagggaatcaaagaagattgacaaacacatgtatcatgacatgtacatgaaggtgaagggtaatgttttcaagaacaagcgtgtgctgatggaaaatatccacaagacaaaggctgagaaggctagagagaagaccttttccgaccaatttgaggctaggagggcaaagaacaaggcaagcagagaaagaaagtttgcaaggagggaagaacgtttggctcagggaccaggaggagagaagccagtacaacaacctgcagcaccagctgctgccgcaccagcccagccagctcanggatcttaagaagtcgaagaaatgagcaagatgaattgtaaggagggttggcgctatgcctacttttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="65252" stop="62049"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64952" g_stop="64829" g_length="124"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="125" r_length="125" r_score="0.968"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64828" i_stop="63671" i_length="1158">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.955" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63670" g_stop="63548" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="126" r_stop="248" r_length="123" r_score="0.984"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63547" i_stop="63057" i_length="491">
            <donor d_prob="0.909" d_score="0.98"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="63056" g_stop="62743" g_length="314"/>
          <reference_exon_boundary r_type="cDNA" r_start="249" r_stop="562" r_length="314" r_score="0.990"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="62742" i_stop="62565" i_length="178">
            <donor d_prob="0.513" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.85"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="62564" g_stop="62497" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="563" r_stop="633" r_length="71" r_score="0.868"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="62496" i_stop="62417" i_length="80">
            <donor d_prob="1.000" d_score="0.81"/>
            <acceptor a_prob="0.924" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="62416" g_stop="62349" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="634" r_stop="702" r_length="69" r_score="0.926"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E455504" ref_strand="+">
        <total_alignment_score>0.967</total_alignment_score>
        <cumulative_length_of_scored_exons>697</cumulative_length_of_scored_exons>
        <coverage percentage="0.993" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E455504" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64952" e_stop="64829"/>
          <exon e_start="63670" e_stop="63548"/>
          <exon e_start="63056" e_stop="62743"/>
          <exon e_start="62564" e_stop="62497"/>
          <exon e_start="62416" e_stop="62349"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACAAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGA-GGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCCGTATGTTTCTGTTTTCTGTTTGTTATCAATATCTATTTACGTTTATGCTATCTCTTTTAATCTCTTGTTTGTATGTTATGGCTTCTGATTGTGAAAGATCTATAGTAGGTTTTGATCAGTTTAGCTCCAACGATGCTTAGGTTATGTTACTTTATCGTTTCGCCGTCTTTTCTTGTGTGGAGTGTTTAATTTTGGAATTTGATCAACCGTAGTGTTGTTTTAACCACATATACTCTGATGTCGACCAGTTCAGATCCATAGAAGCATTGATTATTTGTGTTGAGGTTTTAGGTTTGGATTTTGATCAAACATTACAATGTTTCAACTGAATATACTGTTGAGGTATATTTTTGTCGTAGAGTTTGATCAGTTAAGCTCCAGTGTACCATAGATTAATTTACTGTTACTATCAATTTGCCTTTTGTTAGAGTTGCTGTTTTGAATTTGATCAGTATACTCCTTATGCATTGTTCACAAGATTAGCAGCATACTAATGTTTTTTTATTTATGTCTACTGTGTCAGCTTAGAGTGATATTTTTTAGGTTTTTGCATTGAAAACATATTTGTTTTTGGTAAACATGATTAACAAGGATGGTTGTTCTAGTGTTAAATGGATGCGAATAAACAATTATGCTGATTTTTTGGAAAACTGAAGATGTAGTGGATTGAAATTATTGGCAGATGTGGATAGGTTATGTGACAAGTTATATTTGCTGAAGTTTTTGAGTCGTGAGATTGAAATGTAATTGAGCTGTATATGTTCATTACAACACTGTCATTGTAATTTAATCAGTAATGATGATAGGTTACTAAACAGTGGGATGAATTAACTGCAATTATCTTTGTTATTGGTAGATGTCAATATGGAAAGATACCTATTTTGTGGGATTTCATTGGGTATGTTGTTGTATTGGCAGATATTTATTTGGTGTTGCTGCTTTGCGTTATTTGCCTCTTAATCTGATGTTTAGATGACAAAGTGATATTAATGTTTACTCAATCTAGATAACTAGAACATGTTTGCTGGAACAAGCTTATTGGTTGAGCTTGTGCAAGCCAGTTGCAATCCTTGTAGCTCTCCCTATGTCATTGTGCCAACTATTTTTTGTCATATTTCTATGAACTGCCCGTAATCCCTTCCTTTCCACTTAATACAGGTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATGGTACATCCTTGTCTTGACTGTGATTGCAGAAACTCATTTTTCATGCCCTAATTCAGTTTTTAGGTAGCTCTATCAGTTTGCTGTCAACCATTGGGCATTGGTTTTTTTCTTCTTCCAAATAGTCGTTAAAATGTTAGAAGGACTTGGATTTGATAACTCATTTCTCAATCATAATAGAGAAGAATATAAGAGGTGAACTTCCTATGAGAGTCTTTGGCCATAGATGTCATCTAGGCCAATTGAAGTGAGATACAGGAAATATAAGCCTATATTTAGTGTCACTTCATCTTTTTTGTCCTAACTAAATAGTTTTGTGTACTCCATACCTCAAGAAGTTATTTCAATGTAGGCACCTTTTTGGTTGCTTGGTTTGAAAGATTATCTTGCTCATATATTAACTGGCTAGAACTATGCCATTTCTCTCTTCTTTGTAACTAATGAATATTAGCAGGTGAAATTGCTCTGTTGGCTGATGTCTGTTCTTTTCTCAGGTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGAGAAGAACGTTTGGCTCAGGTATTGTTTGAAGCTCATTAAAATTTCTAGGGAAAAGTTGGCTCTGACACTTGATGGAGTGCTCTACTCTACTCCATGTTTTATGGTTTTAAGAAACGTTTCATGCAATTATGGGATTTTATGTCCTTTTAAATAACTGCATAGGATTTTTTCTCATCTTTTCTGTTTCAAATTTCAGGGACCAGGAGGAGAGAAGCCAGT---ACAACCTGCAGCACCAGCCGCTGCTGCACCAGCCCAGCCAGCCCAGTAAGTTCATCTGCTATATTAATTGTAGTTTCTCCTAGGGCCTAGTTTGAACATCATTTGATGAGAATATGTCTTTTCAGGGGATC-TAAGAAGTCGAAGAAATGAGCGTGATGAATTGTAAGGAGGGTTGGCGCTATGCCTACTTTTT</genome_strand>
        <mrna_strand>ACAAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAAGGAAAAGTTTGGCTTGATCCTAATGAAGGGAATGAAATCTCCATGGCCAATTCCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCAAGATCTCGTGCTCGCAGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAGACCTTTTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGGGAAGAACGTTTGGCTCAG..................................................................................................................................................................................GGACCAGGAGGAGAGAAGCCAGTACAACAACCTGCAGCACCAGCTGCTGCCGCACCAGCCCAGCCAGCTCA................................................................................NGGATCTTAAGAAGTCGAAGAAATGAGCAAGATGAATTGTAAGGAGGGTTGGCGCTATGCCTACTTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E453756" ref_strand="+" ref_description="SGN-E453756 [cSTS-21-E1]">
      <seq>caaaatcgaaaatggtttcgttgaagctccagaagcggctcgccgctagtgtcctcaagtgtggaagaggaaaagtttggcttgatcctaatgaagggaatgaaatctccatggccaattcccgtcaaaacatcaggaaattggttaaggatggtttcatcatcaggaaaccaaccaaaattcactcaagatctcgtgctcgcagaatgaaggaggccaagaggaaaggccgtcactctggatatggtaagcgcaaaggtaccagggaggctagactgcctaccaaggtgctttggatgaggagattgagagtcctcaggcgtttgcttcgcaagtatagggaatcaaagaagattgacaaacacatgtatcatgacatgtacatgaaggtgaagggtaatgttttcaagacaagncgtgtgctgatggaaaatatccacaagacaaaggctgagaaggctagagagaagaccttgtccgaccaatttgaggctaggagggcaaagaacaaggcaagcagagaaagaaagtttgcaaggagggaagaacgtttggctcanggaccaggangagagaagccagtacaacaacctgcagcaccagctgctgccgcaccagcccagccagctcagggatcttaagaagtcgaagaaatgagcaagatgaattgtagggaggggttggcgctatgcctacttttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="65251" stop="62049"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64951" g_stop="64829" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="123" r_length="123" r_score="0.984"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64828" i_stop="63671" i_length="1158">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.955" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63670" g_stop="63548" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="124" r_stop="246" r_length="123" r_score="0.984"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63547" i_stop="63057" i_length="491">
            <donor d_prob="0.909" d_score="0.98"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="63056" g_stop="62743" g_length="314"/>
          <reference_exon_boundary r_type="cDNA" r_start="247" r_stop="560" r_length="314" r_score="0.981"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="62742" i_stop="62565" i_length="178">
            <donor d_prob="0.513" d_score="0.96"/>
            <acceptor a_prob="1.000" a_score="0.83"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="62564" g_stop="62497" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="561" r_stop="631" r_length="71" r_score="0.853"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="62496" i_stop="62417" i_length="80">
            <donor d_prob="1.000" d_score="0.81"/>
            <acceptor a_prob="0.924" a_score="0.85"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="62416" g_stop="62349" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="632" r_stop="701" r_length="70" r_score="0.897"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E453756" ref_strand="+">
        <total_alignment_score>0.961</total_alignment_score>
        <cumulative_length_of_scored_exons>696</cumulative_length_of_scored_exons>
        <coverage percentage="0.993" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E453756" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64951" e_stop="64829"/>
          <exon e_start="63670" e_stop="63548"/>
          <exon e_start="63056" e_stop="62743"/>
          <exon e_start="62564" e_stop="62497"/>
          <exon e_start="62416" e_stop="62349"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCCGTATGTTTCTGTTTTCTGTTTGTTATCAATATCTATTTACGTTTATGCTATCTCTTTTAATCTCTTGTTTGTATGTTATGGCTTCTGATTGTGAAAGATCTATAGTAGGTTTTGATCAGTTTAGCTCCAACGATGCTTAGGTTATGTTACTTTATCGTTTCGCCGTCTTTTCTTGTGTGGAGTGTTTAATTTTGGAATTTGATCAACCGTAGTGTTGTTTTAACCACATATACTCTGATGTCGACCAGTTCAGATCCATAGAAGCATTGATTATTTGTGTTGAGGTTTTAGGTTTGGATTTTGATCAAACATTACAATGTTTCAACTGAATATACTGTTGAGGTATATTTTTGTCGTAGAGTTTGATCAGTTAAGCTCCAGTGTACCATAGATTAATTTACTGTTACTATCAATTTGCCTTTTGTTAGAGTTGCTGTTTTGAATTTGATCAGTATACTCCTTATGCATTGTTCACAAGATTAGCAGCATACTAATGTTTTTTTATTTATGTCTACTGTGTCAGCTTAGAGTGATATTTTTTAGGTTTTTGCATTGAAAACATATTTGTTTTTGGTAAACATGATTAACAAGGATGGTTGTTCTAGTGTTAAATGGATGCGAATAAACAATTATGCTGATTTTTTGGAAAACTGAAGATGTAGTGGATTGAAATTATTGGCAGATGTGGATAGGTTATGTGACAAGTTATATTTGCTGAAGTTTTTGAGTCGTGAGATTGAAATGTAATTGAGCTGTATATGTTCATTACAACACTGTCATTGTAATTTAATCAGTAATGATGATAGGTTACTAAACAGTGGGATGAATTAACTGCAATTATCTTTGTTATTGGTAGATGTCAATATGGAAAGATACCTATTTTGTGGGATTTCATTGGGTATGTTGTTGTATTGGCAGATATTTATTTGGTGTTGCTGCTTTGCGTTATTTGCCTCTTAATCTGATGTTTAGATGACAAAGTGATATTAATGTTTACTCAATCTAGATAACTAGAACATGTTTGCTGGAACAAGCTTATTGGTTGAGCTTGTGCAAGCCAGTTGCAATCCTTGTAGCTCTCCCTATGTCATTGTGCCAACTATTTTTTGTCATATTTCTATGAACTGCCCGTAATCCCTTCCTTTCCACTTAATACAGGTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATGGTACATCCTTGTCTTGACTGTGATTGCAGAAACTCATTTTTCATGCCCTAATTCAGTTTTTAGGTAGCTCTATCAGTTTGCTGTCAACCATTGGGCATTGGTTTTTTTCTTCTTCCAAATAGTCGTTAAAATGTTAGAAGGACTTGGATTTGATAACTCATTTCTCAATCATAATAGAGAAGAATATAAGAGGTGAACTTCCTATGAGAGTCTTTGGCCATAGATGTCATCTAGGCCAATTGAAGTGAGATACAGGAAATATAAGCCTATATTTAGTGTCACTTCATCTTTTTTGTCCTAACTAAATAGTTTTGTGTACTCCATACCTCAAGAAGTTATTTCAATGTAGGCACCTTTTTGGTTGCTTGGTTTGAAAGATTATCTTGCTCATATATTAACTGGCTAGAACTATGCCATTTCTCTCTTCTTTGTAACTAATGAATATTAGCAGGTGAAATTGCTCTGTTGGCTGATGTCTGTTCTTTTCTCAGGTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAG-CGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGAGAAGAACGTTTGGCTCAGGTATTGTTTGAAGCTCATTAAAATTTCTAGGGAAAAGTTGGCTCTGACACTTGATGGAGTGCTCTACTCTACTCCATGTTTTATGGTTTTAAGAAACGTTTCATGCAATTATGGGATTTTATGTCCTTTTAAATAACTGCATAGGATTTTTTCTCATCTTTTCTGTTTCAAATTTCAGGGACCAGGAGGAGAGAAGCCAGT---ACAACCTGCAGCACCAGCCGCTGCTGCACCAGCCCAGCCAGCCCAGTAAGTTCATCTGCTATATTAATTGTAGTTTCTCCTAGGGCCTAGTTTGAACATCATTTGATGAGAATATGTCTTTTCAGGGGATC-TAAGAAGTCGAAGAAATGAGCGTGATGAATTGTAAGGA-GGGTTGGCGCTATGCCTACTTTTT</genome_strand>
        <mrna_strand>CAAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGAAAAGTTTGGCTTGATCCTAATGAAGGGAATGAAATCTCCATGGCCAATTCCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCAAGATCTCGTGCTCGCAGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAG-ACAAGNCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAGACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGGGAAGAACGTTTGGCTCAN..................................................................................................................................................................................GGACCAGGANGAGAGAAGCCAGTACAACAACCTGCAGCACCAGCTGCTGCCGCACCAGCCCAGCCAGCTCA................................................................................GGGATCTTAAGAAGTCGAAGAAATGAGCAAGATGAATTGTAGGGAGGGGTTGGCGCTATGCCTACTTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E593580" ref_strand="+" ref_description="SGN-E593580 [36813]">
      <seq>caaaatcgaaaatggtttcgttgaagctccagaagcggctcgccgctagtgtcctcaagtgtggaagaggaaaagtttggcttgatcctaatgaagggaatgaaatctccatggccaattcccgtcaaaacatcaggaaattggttaaggatggtttcatcatcaggaaaccaaccaaaattcactcaagatctcgtgctcgcagaatgaaggaggccaagaggaaaggccgtcactctggatatggtaagcgcaaaggtaccagggaggctagactgcctaccaaggtgctttggatgaggagattgagagtcctcaggcgtttgcttcgcaagtatagggaatcaaagaagattgacaaacacatgtatcatgacatgtacatgaaggtgaagggtaatgttttcaagaacaagcgtgtgctgatggaaaatatccacaagacaaaggctgagaaggctagagagaagaccttgtccgaccaatttgaggctaggagggcaaagaacaaggcaagcagagaaagaaagtttgcaaggagggaagaacgtttggctcagggaccaggaggagagaagccagtacaacaacctgcagcaccagctgctgccgcaccagcccagccagctcagggatctaagaagtcgaagaaaatgagcaagatagaattgtaaggagggttggcgctatgcctactttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="65251" stop="62050"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64951" g_stop="64829" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="123" r_length="123" r_score="0.984"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64828" i_stop="63671" i_length="1158">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.955" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63670" g_stop="63548" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="124" r_stop="246" r_length="123" r_score="0.984"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63547" i_stop="63057" i_length="491">
            <donor d_prob="0.909" d_score="0.98"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="63056" g_stop="62743" g_length="314"/>
          <reference_exon_boundary r_type="cDNA" r_start="247" r_stop="560" r_length="314" r_score="0.994"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="62742" i_stop="62565" i_length="178">
            <donor d_prob="0.513" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.85"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="62564" g_stop="62497" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="561" r_stop="631" r_length="71" r_score="0.868"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="62496" i_stop="62417" i_length="80">
            <donor d_prob="1.000" d_score="0.81"/>
            <acceptor a_prob="0.924" a_score="0.88"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="62416" g_stop="62350" g_length="67"/>
          <reference_exon_boundary r_type="cDNA" r_start="632" r_stop="700" r_length="69" r_score="0.910"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E593580" ref_strand="+">
        <total_alignment_score>0.970</total_alignment_score>
        <cumulative_length_of_scored_exons>695</cumulative_length_of_scored_exons>
        <coverage percentage="0.993" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E593580" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64951" e_stop="64829"/>
          <exon e_start="63670" e_stop="63548"/>
          <exon e_start="63056" e_stop="62743"/>
          <exon e_start="62564" e_stop="62497"/>
          <exon e_start="62416" e_stop="62350"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCCGTATGTTTCTGTTTTCTGTTTGTTATCAATATCTATTTACGTTTATGCTATCTCTTTTAATCTCTTGTTTGTATGTTATGGCTTCTGATTGTGAAAGATCTATAGTAGGTTTTGATCAGTTTAGCTCCAACGATGCTTAGGTTATGTTACTTTATCGTTTCGCCGTCTTTTCTTGTGTGGAGTGTTTAATTTTGGAATTTGATCAACCGTAGTGTTGTTTTAACCACATATACTCTGATGTCGACCAGTTCAGATCCATAGAAGCATTGATTATTTGTGTTGAGGTTTTAGGTTTGGATTTTGATCAAACATTACAATGTTTCAACTGAATATACTGTTGAGGTATATTTTTGTCGTAGAGTTTGATCAGTTAAGCTCCAGTGTACCATAGATTAATTTACTGTTACTATCAATTTGCCTTTTGTTAGAGTTGCTGTTTTGAATTTGATCAGTATACTCCTTATGCATTGTTCACAAGATTAGCAGCATACTAATGTTTTTTTATTTATGTCTACTGTGTCAGCTTAGAGTGATATTTTTTAGGTTTTTGCATTGAAAACATATTTGTTTTTGGTAAACATGATTAACAAGGATGGTTGTTCTAGTGTTAAATGGATGCGAATAAACAATTATGCTGATTTTTTGGAAAACTGAAGATGTAGTGGATTGAAATTATTGGCAGATGTGGATAGGTTATGTGACAAGTTATATTTGCTGAAGTTTTTGAGTCGTGAGATTGAAATGTAATTGAGCTGTATATGTTCATTACAACACTGTCATTGTAATTTAATCAGTAATGATGATAGGTTACTAAACAGTGGGATGAATTAACTGCAATTATCTTTGTTATTGGTAGATGTCAATATGGAAAGATACCTATTTTGTGGGATTTCATTGGGTATGTTGTTGTATTGGCAGATATTTATTTGGTGTTGCTGCTTTGCGTTATTTGCCTCTTAATCTGATGTTTAGATGACAAAGTGATATTAATGTTTACTCAATCTAGATAACTAGAACATGTTTGCTGGAACAAGCTTATTGGTTGAGCTTGTGCAAGCCAGTTGCAATCCTTGTAGCTCTCCCTATGTCATTGTGCCAACTATTTTTTGTCATATTTCTATGAACTGCCCGTAATCCCTTCCTTTCCACTTAATACAGGTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATGGTACATCCTTGTCTTGACTGTGATTGCAGAAACTCATTTTTCATGCCCTAATTCAGTTTTTAGGTAGCTCTATCAGTTTGCTGTCAACCATTGGGCATTGGTTTTTTTCTTCTTCCAAATAGTCGTTAAAATGTTAGAAGGACTTGGATTTGATAACTCATTTCTCAATCATAATAGAGAAGAATATAAGAGGTGAACTTCCTATGAGAGTCTTTGGCCATAGATGTCATCTAGGCCAATTGAAGTGAGATACAGGAAATATAAGCCTATATTTAGTGTCACTTCATCTTTTTTGTCCTAACTAAATAGTTTTGTGTACTCCATACCTCAAGAAGTTATTTCAATGTAGGCACCTTTTTGGTTGCTTGGTTTGAAAGATTATCTTGCTCATATATTAACTGGCTAGAACTATGCCATTTCTCTCTTCTTTGTAACTAATGAATATTAGCAGGTGAAATTGCTCTGTTGGCTGATGTCTGTTCTTTTCTCAGGTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGAGAAGAACGTTTGGCTCAGGTATTGTTTGAAGCTCATTAAAATTTCTAGGGAAAAGTTGGCTCTGACACTTGATGGAGTGCTCTACTCTACTCCATGTTTTATGGTTTTAAGAAACGTTTCATGCAATTATGGGATTTTATGTCCTTTTAAATAACTGCATAGGATTTTTTCTCATCTTTTCTGTTTCAAATTTCAGGGACCAGGAGGAGAGAAGCCAGT---ACAACCTGCAGCACCAGCCGCTGCTGCACCAGCCCAGCCAGCCCAGTAAGTTCATCTGCTATATTAATTGTAGTTTCTCCTAGGGCCTAGTTTGAACATCATTTGATGAGAATATGTCTTTTCAGGGGATCTAAGAAGTCGAAG-AAATGAGCGTGAT-GAATTGTAAGGAGGGTTGGCGCTATGCCTACTTTT</genome_strand>
        <mrna_strand>CAAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGAAAAGTTTGGCTTGATCCTAATGAAGGGAATGAAATCTCCATGGCCAATTCCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCAAGATCTCGTGCTCGCAGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAGACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGGGAAGAACGTTTGGCTCAG..................................................................................................................................................................................GGACCAGGAGGAGAGAAGCCAGTACAACAACCTGCAGCACCAGCTGCTGCCGCACCAGCCCAGCCAGCTCA................................................................................GGGATCTAAGAAGTCGAAGAAAATGAGCAAGATAGAATTGTAAGGAGGGTTGGCGCTATGCCTACTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E586011" ref_strand="+" ref_description="SGN-E586011 [68477]">
      <seq>cataatcgaaaatggtttcgttgaagctccagaagcggctcgccgctagcgtcctcaagtgtggaagaggaaaagtttggcttgatcctaatgaagggaatgaaatctccatggccaattcccgtcaaaacatcaggaaattggttaaggatggtttcatcatcaggaaaccaaccaaaattcactcaagatctcgtgctcgcagaatgaaggaggccaagaggaaaggccgtcactctggatatggtaagcgcaaaggtaccagggaggctagactgcctaccaaggtgctttggatgaggagattgagagtcctcaggcgtttgcttcgcaagtatagggaatcaaagaagattgacaaacacatgtatcatgacatgtacatgaaggtgaagggtaatgttttcaagaacaagcgtgtgctgatggaaaatatccacaagacaaaggctgagaaggctagagagaagaccttgtccgaccaatttgaggctaggagggcaaagaacaaggcaagcagagaaagaaagtttgcaaggagggaagaacgtttggctcagggaccaggaggagagaagccagtacaacaacctgcagcaccagctgctgccgnaccaggcccagccagctcagggatctaagaagtcgaagaaatgagcaagatgaattgtaaggagggttggcgctat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="65251" stop="62060"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64951" g_stop="64829" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="123" r_length="123" r_score="0.967"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64828" i_stop="63671" i_length="1158">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.955" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63670" g_stop="63548" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="124" r_stop="246" r_length="123" r_score="0.984"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63547" i_stop="63057" i_length="491">
            <donor d_prob="0.909" d_score="0.98"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="63056" g_stop="62743" g_length="314"/>
          <reference_exon_boundary r_type="cDNA" r_start="247" r_stop="560" r_length="314" r_score="0.994"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="62742" i_stop="62565" i_length="178">
            <donor d_prob="0.513" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.85"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="62564" g_stop="62497" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="561" r_stop="632" r_length="72" r_score="0.824"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="62496" i_stop="62417" i_length="80">
            <donor d_prob="1.000" d_score="0.74"/>
            <acceptor a_prob="0.924" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="62416" g_stop="62360" g_length="57"/>
          <reference_exon_boundary r_type="cDNA" r_start="633" r_stop="689" r_length="57" r_score="0.965"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E586011" ref_strand="+">
        <total_alignment_score>0.968</total_alignment_score>
        <cumulative_length_of_scored_exons>685</cumulative_length_of_scored_exons>
        <coverage percentage="0.994" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E586011" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64951" e_stop="64829"/>
          <exon e_start="63670" e_stop="63548"/>
          <exon e_start="63056" e_stop="62743"/>
          <exon e_start="62564" e_stop="62497"/>
          <exon e_start="62416" e_stop="62360"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCCGTATGTTTCTGTTTTCTGTTTGTTATCAATATCTATTTACGTTTATGCTATCTCTTTTAATCTCTTGTTTGTATGTTATGGCTTCTGATTGTGAAAGATCTATAGTAGGTTTTGATCAGTTTAGCTCCAACGATGCTTAGGTTATGTTACTTTATCGTTTCGCCGTCTTTTCTTGTGTGGAGTGTTTAATTTTGGAATTTGATCAACCGTAGTGTTGTTTTAACCACATATACTCTGATGTCGACCAGTTCAGATCCATAGAAGCATTGATTATTTGTGTTGAGGTTTTAGGTTTGGATTTTGATCAAACATTACAATGTTTCAACTGAATATACTGTTGAGGTATATTTTTGTCGTAGAGTTTGATCAGTTAAGCTCCAGTGTACCATAGATTAATTTACTGTTACTATCAATTTGCCTTTTGTTAGAGTTGCTGTTTTGAATTTGATCAGTATACTCCTTATGCATTGTTCACAAGATTAGCAGCATACTAATGTTTTTTTATTTATGTCTACTGTGTCAGCTTAGAGTGATATTTTTTAGGTTTTTGCATTGAAAACATATTTGTTTTTGGTAAACATGATTAACAAGGATGGTTGTTCTAGTGTTAAATGGATGCGAATAAACAATTATGCTGATTTTTTGGAAAACTGAAGATGTAGTGGATTGAAATTATTGGCAGATGTGGATAGGTTATGTGACAAGTTATATTTGCTGAAGTTTTTGAGTCGTGAGATTGAAATGTAATTGAGCTGTATATGTTCATTACAACACTGTCATTGTAATTTAATCAGTAATGATGATAGGTTACTAAACAGTGGGATGAATTAACTGCAATTATCTTTGTTATTGGTAGATGTCAATATGGAAAGATACCTATTTTGTGGGATTTCATTGGGTATGTTGTTGTATTGGCAGATATTTATTTGGTGTTGCTGCTTTGCGTTATTTGCCTCTTAATCTGATGTTTAGATGACAAAGTGATATTAATGTTTACTCAATCTAGATAACTAGAACATGTTTGCTGGAACAAGCTTATTGGTTGAGCTTGTGCAAGCCAGTTGCAATCCTTGTAGCTCTCCCTATGTCATTGTGCCAACTATTTTTTGTCATATTTCTATGAACTGCCCGTAATCCCTTCCTTTCCACTTAATACAGGTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATGGTACATCCTTGTCTTGACTGTGATTGCAGAAACTCATTTTTCATGCCCTAATTCAGTTTTTAGGTAGCTCTATCAGTTTGCTGTCAACCATTGGGCATTGGTTTTTTTCTTCTTCCAAATAGTCGTTAAAATGTTAGAAGGACTTGGATTTGATAACTCATTTCTCAATCATAATAGAGAAGAATATAAGAGGTGAACTTCCTATGAGAGTCTTTGGCCATAGATGTCATCTAGGCCAATTGAAGTGAGATACAGGAAATATAAGCCTATATTTAGTGTCACTTCATCTTTTTTGTCCTAACTAAATAGTTTTGTGTACTCCATACCTCAAGAAGTTATTTCAATGTAGGCACCTTTTTGGTTGCTTGGTTTGAAAGATTATCTTGCTCATATATTAACTGGCTAGAACTATGCCATTTCTCTCTTCTTTGTAACTAATGAATATTAGCAGGTGAAATTGCTCTGTTGGCTGATGTCTGTTCTTTTCTCAGGTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGAGAAGAACGTTTGGCTCAGGTATTGTTTGAAGCTCATTAAAATTTCTAGGGAAAAGTTGGCTCTGACACTTGATGGAGTGCTCTACTCTACTCCATGTTTTATGGTTTTAAGAAACGTTTCATGCAATTATGGGATTTTATGTCCTTTTAAATAACTGCATAGGATTTTTTCTCATCTTTTCTGTTTCAAATTTCAGGGACCAGGAGGAGAGAAGCCAGT---ACAACCTGCAGCACCAGCCGCTGCTGCACCA-GCCCAGCCAGCCCAGTAAGTTCATCTGCTATATTAATTGTAGTTTCTCCTAGGGCCTAGTTTGAACATCATTTGATGAGAATATGTCTTTTCAGGGGATCTAAGAAGTCGAAGAAATGAGCGTGATGAATTGTAAGGAGGGTTGGCGCTAT</genome_strand>
        <mrna_strand>CATAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGCGTCCTCAAGTGTGGAAGAGGAAAAGTTTGGCTTGATCCTAATGAAGGGAATGAAATCTCCATGGCCAATTCCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCAAGATCTCGTGCTCGCAGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAGACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGGGAAGAACGTTTGGCTCAG..................................................................................................................................................................................GGACCAGGAGGAGAGAAGCCAGTACAACAACCTGCAGCACCAGCTGCTGCCGNACCAGGCCCAGCCAGCTCA................................................................................GGGATCTAAGAAGTCGAAGAAATGAGCAAGATGAATTGTAAGGAGGGTTGGCGCTAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E567583" ref_strand="+" ref_description="SGN-E567583 [11731]">
      <seq>attgtgagggagagagaccgagagaggaaacaaaaatggtgtcactgaaacttcaggaagcggctcgccgctagtgtcctcaagtgtggaagaggcaaagtttggcttgatcctaatgaggggaatgaaatctccatggccaattcccgccaaaacatcaggaaattggtgaaggatggtttcatcatcaggaaaccaaccaaaattcactcaagatctcgtgctcgcagaatgaaggaggccaagaggaaaggccgtcactctgggatatggtaagcgcaaaggtaccaggggaggctagactgcctaccaagggtgctttggatgaggagattgagagtcctcaggcgtttgcttcgcaagtatagggaatcaaagaagattgacaaacacatgtatcatgacatgtacatgaaggtgaagggtaatgttttcaagaacaagcgtgtgctgatggaaaatatccacaagacaaaggctgagaaggctagagagaagaccttgtccgaccaatttgaggctaggagggcaaagaacaaggcaagcagagaaagaaagtttgcaaggagggaagaacgtttggctcagggaccaggaggagagaagcagtacaacaacctggcagcaccagccgctgccgctcccagcccagaccaggcttcaggtatacaagaagtcgaagaaaatgaagcatgatgaattttagggaggttggc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="65249" stop="62199"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64919" g_stop="64829" g_length="91"/>
          <reference_exon_boundary r_type="cDNA" r_start="58" r_stop="148" r_length="91" r_score="0.978"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64828" i_stop="63671" i_length="1158">
            <donor d_prob="0.998" d_score="0.96"/>
            <acceptor a_prob="0.955" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63670" g_stop="63548" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="149" r_stop="272" r_length="124" r_score="0.951"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63547" i_stop="63057" i_length="491">
            <donor d_prob="0.909" d_score="0.94"/>
            <acceptor a_prob="0.975" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="63056" g_stop="62743" g_length="314"/>
          <reference_exon_boundary r_type="cDNA" r_start="273" r_stop="588" r_length="316" r_score="0.981"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="62742" i_stop="62565" i_length="178">
            <donor d_prob="0.513" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.81"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="62564" g_stop="62497" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="589" r_stop="663" r_length="75" r_score="0.706"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="62496" i_stop="62417" i_length="80">
            <donor d_prob="1.000" d_score="0.71"/>
            <acceptor a_prob="0.924" a_score="0.77"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="62416" g_stop="62365" g_length="52"/>
          <reference_exon_boundary r_type="cDNA" r_start="664" r_stop="716" r_length="53" r_score="0.788"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E567583" ref_strand="+">
        <total_alignment_score>0.931</total_alignment_score>
        <cumulative_length_of_scored_exons>648</cumulative_length_of_scored_exons>
        <coverage percentage="0.905" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E567583" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64919" e_stop="64829"/>
          <exon e_start="63670" e_stop="63548"/>
          <exon e_start="63056" e_stop="62743"/>
          <exon e_start="62564" e_stop="62497"/>
          <exon e_start="62416" e_stop="62365"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCCGTATGTTTCTGTTTTCTGTTTGTTATCAATATCTATTTACGTTTATGCTATCTCTTTTAATCTCTTGTTTGTATGTTATGGCTTCTGATTGTGAAAGATCTATAGTAGGTTTTGATCAGTTTAGCTCCAACGATGCTTAGGTTATGTTACTTTATCGTTTCGCCGTCTTTTCTTGTGTGGAGTGTTTAATTTTGGAATTTGATCAACCGTAGTGTTGTTTTAACCACATATACTCTGATGTCGACCAGTTCAGATCCATAGAAGCATTGATTATTTGTGTTGAGGTTTTAGGTTTGGATTTTGATCAAACATTACAATGTTTCAACTGAATATACTGTTGAGGTATATTTTTGTCGTAGAGTTTGATCAGTTAAGCTCCAGTGTACCATAGATTAATTTACTGTTACTATCAATTTGCCTTTTGTTAGAGTTGCTGTTTTGAATTTGATCAGTATACTCCTTATGCATTGTTCACAAGATTAGCAGCATACTAATGTTTTTTTATTTATGTCTACTGTGTCAGCTTAGAGTGATATTTTTTAGGTTTTTGCATTGAAAACATATTTGTTTTTGGTAAACATGATTAACAAGGATGGTTGTTCTAGTGTTAAATGGATGCGAATAAACAATTATGCTGATTTTTTGGAAAACTGAAGATGTAGTGGATTGAAATTATTGGCAGATGTGGATAGGTTATGTGACAAGTTATATTTGCTGAAGTTTTTGAGTCGTGAGATTGAAATGTAATTGAGCTGTATATGTTCATTACAACACTGTCATTGTAATTTAATCAGTAATGATGATAGGTTACTAAACAGTGGGATGAATTAACTGCAATTATCTTTGTTATTGGTAGATGTCAATATGGAAAGATACCTATTTTGTGGGATTTCATTGGGTATGTTGTTGTATTGGCAGATATTTATTTGGTGTTGCTGCTTTGCGTTATTTGCCTCTTAATCTGATGTTTAGATGACAAAGTGATATTAATGTTTACTCAATCTAGATAACTAGAACATGTTTGCTGGAACAAGCTTATTGGTTGAGCTTGTGCAAGCCAGTTGCAATCCTTGTAGCTCTCCCTATGTCATTGTGCCAACTATTTTTTGTCATATTTCTATGAACTGCCCGTAATCCCTTCCTTTCCACTTAATACAGGTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCT-GGATATGGTACATCCTTGTCTTGACTGTGATTGCAGAAACTCATTTTTCATGCCCTAATTCAGTTTTTAGGTAGCTCTATCAGTTTGCTGTCAACCATTGGGCATTGGTTTTTTTCTTCTTCCAAATAGTCGTTAAAATGTTAGAAGGACTTGGATTTGATAACTCATTTCTCAATCATAATAGAGAAGAATATAAGAGGTGAACTTCCTATGAGAGTCTTTGGCCATAGATGTCATCTAGGCCAATTGAAGTGAGATACAGGAAATATAAGCCTATATTTAGTGTCACTTCATCTTTTTTGTCCTAACTAAATAGTTTTGTGTACTCCATACCTCAAGAAGTTATTTCAATGTAGGCACCTTTTTGGTTGCTTGGTTTGAAAGATTATCTTGCTCATATATTAACTGGCTAGAACTATGCCATTTCTCTCTTCTTTGTAACTAATGAATATTAGCAGGTGAAATTGCTCTGTTGGCTGATGTCTGTTCTTTTCTCAGGTAAGCGCAAAGGTACCA-GGGAGGCTAGACTGCCTACCAA-GGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGAGAAGAACGTTTGGCTCAGGTATTGTTTGAAGCTCATTAAAATTTCTAGGGAAAAGTTGGCTCTGACACTTGATGGAGTGCTCTACTCTACTCCATGTTTTATGGTTTTAAGAAACGTTTCATGCAATTATGGGATTTTATGTCCTTTTAAATAACTGCATAGGATTTTTTCTCATCTTTTCTGTTTCAAATTTCAGGGACCAGGAGGAGAGAAGC--CAGTACAACCT-GCAGCACCAGCCGCTGCTGC-ACCAGCCCAG-CCA-GC-CCAGTAAGTTCATCTGCTATATTAATTGTAGTTTCTCCTAGGGCCTAGTTTGAACATCATTTGATGAGAATATGTCTTTTCAGGGGATCTAAGAAGTCGAAG-AAATG-AGCGTGATGAATTGTAAGGAGGGTTGGC</genome_strand>
        <mrna_strand>AAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAGGGGAATGAAATCTCCATGGCCAATTCCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCAAAACATCAGGAAATTGGTGAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCAAGATCTCGTGCTCGCAGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGGATATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGCGCAAAGGTACCAGGGGAGGCTAGACTGCCTACCAAGGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAGACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGGGAAGAACGTTTGGCTCAG..................................................................................................................................................................................GGACCAGGAGGAGAGAAGCAGTACAACAACCTGGCAGCACCAGCCGCTGCCGCTCCCAGCCCAGACCAGGCTTCA................................................................................GGTATACAAGAAGTCGAAGAAAATGAAGCATGATGAATTTTAGGGA-GGTTGGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E590980" ref_strand="+" ref_description="SGN-E590980 [44588]">
      <seq>caaaatcgaaaatggtttcgttgaagctccagaagcggctcgccgctagtgtcctcaagtgtggaagaggaaaagtttggcttgatcctaatgaagggaatgaaatctccatggccaattcccgtcaaaacatcaggaaattggttaaggatggtttcatcatcaggaaaccaaccaaaattcactcaagatctcgtgctcgcagaatgaaggaggccaagaggaaaggccgtcactctggatatggtaagcgcaaaggtaccagggaggctagactgcctaccaaggtgctttggatgaggagattgagagtcctcaggcgtttgcttcgcaagtatagggaatcaaagaagattgacaaacacatgtatcatgacatgtacatgaaggtgaagggtaatgttttcaagaacaagcgtgtgctgatggaaaatatccacaagacaaaggctgagaaggctagagagaagaccttgtccgaccaatttgaggctaggagggcaaagaacaaggcaagcagagaaagaaagtttgcaaggagggaagaacgtttggctcagggaccaggaggagagaagccagtacaacaacctgcagcaccagctgctgccgcaccagcccagccagctcagggatctaagaagtcgaagaaatgagcaagatgaattgtaaggagggtt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="65251" stop="62068"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64951" g_stop="64829" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="123" r_length="123" r_score="0.984"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64828" i_stop="63671" i_length="1158">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.955" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63670" g_stop="63548" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="124" r_stop="246" r_length="123" r_score="0.984"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63547" i_stop="63057" i_length="491">
            <donor d_prob="0.909" d_score="0.98"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="63056" g_stop="62743" g_length="314"/>
          <reference_exon_boundary r_type="cDNA" r_start="247" r_stop="560" r_length="314" r_score="0.994"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="62742" i_stop="62565" i_length="178">
            <donor d_prob="0.513" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.85"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="62564" g_stop="62497" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="561" r_stop="631" r_length="71" r_score="0.868"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="62496" i_stop="62417" i_length="80">
            <donor d_prob="1.000" d_score="0.81"/>
            <acceptor a_prob="0.924" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="62416" g_stop="62368" g_length="49"/>
          <reference_exon_boundary r_type="cDNA" r_start="632" r_stop="680" r_length="49" r_score="0.959"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E590980" ref_strand="+">
        <total_alignment_score>0.976</total_alignment_score>
        <cumulative_length_of_scored_exons>677</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E590980" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64951" e_stop="64829"/>
          <exon e_start="63670" e_stop="63548"/>
          <exon e_start="63056" e_stop="62743"/>
          <exon e_start="62564" e_stop="62497"/>
          <exon e_start="62416" e_stop="62368"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCCGTATGTTTCTGTTTTCTGTTTGTTATCAATATCTATTTACGTTTATGCTATCTCTTTTAATCTCTTGTTTGTATGTTATGGCTTCTGATTGTGAAAGATCTATAGTAGGTTTTGATCAGTTTAGCTCCAACGATGCTTAGGTTATGTTACTTTATCGTTTCGCCGTCTTTTCTTGTGTGGAGTGTTTAATTTTGGAATTTGATCAACCGTAGTGTTGTTTTAACCACATATACTCTGATGTCGACCAGTTCAGATCCATAGAAGCATTGATTATTTGTGTTGAGGTTTTAGGTTTGGATTTTGATCAAACATTACAATGTTTCAACTGAATATACTGTTGAGGTATATTTTTGTCGTAGAGTTTGATCAGTTAAGCTCCAGTGTACCATAGATTAATTTACTGTTACTATCAATTTGCCTTTTGTTAGAGTTGCTGTTTTGAATTTGATCAGTATACTCCTTATGCATTGTTCACAAGATTAGCAGCATACTAATGTTTTTTTATTTATGTCTACTGTGTCAGCTTAGAGTGATATTTTTTAGGTTTTTGCATTGAAAACATATTTGTTTTTGGTAAACATGATTAACAAGGATGGTTGTTCTAGTGTTAAATGGATGCGAATAAACAATTATGCTGATTTTTTGGAAAACTGAAGATGTAGTGGATTGAAATTATTGGCAGATGTGGATAGGTTATGTGACAAGTTATATTTGCTGAAGTTTTTGAGTCGTGAGATTGAAATGTAATTGAGCTGTATATGTTCATTACAACACTGTCATTGTAATTTAATCAGTAATGATGATAGGTTACTAAACAGTGGGATGAATTAACTGCAATTATCTTTGTTATTGGTAGATGTCAATATGGAAAGATACCTATTTTGTGGGATTTCATTGGGTATGTTGTTGTATTGGCAGATATTTATTTGGTGTTGCTGCTTTGCGTTATTTGCCTCTTAATCTGATGTTTAGATGACAAAGTGATATTAATGTTTACTCAATCTAGATAACTAGAACATGTTTGCTGGAACAAGCTTATTGGTTGAGCTTGTGCAAGCCAGTTGCAATCCTTGTAGCTCTCCCTATGTCATTGTGCCAACTATTTTTTGTCATATTTCTATGAACTGCCCGTAATCCCTTCCTTTCCACTTAATACAGGTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATGGTACATCCTTGTCTTGACTGTGATTGCAGAAACTCATTTTTCATGCCCTAATTCAGTTTTTAGGTAGCTCTATCAGTTTGCTGTCAACCATTGGGCATTGGTTTTTTTCTTCTTCCAAATAGTCGTTAAAATGTTAGAAGGACTTGGATTTGATAACTCATTTCTCAATCATAATAGAGAAGAATATAAGAGGTGAACTTCCTATGAGAGTCTTTGGCCATAGATGTCATCTAGGCCAATTGAAGTGAGATACAGGAAATATAAGCCTATATTTAGTGTCACTTCATCTTTTTTGTCCTAACTAAATAGTTTTGTGTACTCCATACCTCAAGAAGTTATTTCAATGTAGGCACCTTTTTGGTTGCTTGGTTTGAAAGATTATCTTGCTCATATATTAACTGGCTAGAACTATGCCATTTCTCTCTTCTTTGTAACTAATGAATATTAGCAGGTGAAATTGCTCTGTTGGCTGATGTCTGTTCTTTTCTCAGGTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGAGAAGAACGTTTGGCTCAGGTATTGTTTGAAGCTCATTAAAATTTCTAGGGAAAAGTTGGCTCTGACACTTGATGGAGTGCTCTACTCTACTCCATGTTTTATGGTTTTAAGAAACGTTTCATGCAATTATGGGATTTTATGTCCTTTTAAATAACTGCATAGGATTTTTTCTCATCTTTTCTGTTTCAAATTTCAGGGACCAGGAGGAGAGAAGCCAGT---ACAACCTGCAGCACCAGCCGCTGCTGCACCAGCCCAGCCAGCCCAGTAAGTTCATCTGCTATATTAATTGTAGTTTCTCCTAGGGCCTAGTTTGAACATCATTTGATGAGAATATGTCTTTTCAGGGGATCTAAGAAGTCGAAGAAATGAGCGTGATGAATTGTAAGGAGGGTT</genome_strand>
        <mrna_strand>CAAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGAAAAGTTTGGCTTGATCCTAATGAAGGGAATGAAATCTCCATGGCCAATTCCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCAAGATCTCGTGCTCGCAGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAGACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGGGAAGAACGTTTGGCTCAG..................................................................................................................................................................................GGACCAGGAGGAGAGAAGCCAGTACAACAACCTGCAGCACCAGCTGCTGCCGCACCAGCCCAGCCAGCTCA................................................................................GGGATCTAAGAAGTCGAAGAAATGAGCAAGATGAATTGTAAGGAGGGTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E561086" ref_strand="+" ref_description="SGN-E561086 [20841]">
      <seq>caaaatcgaaaatggtttcgttgaagctccagaagcggctcgccgctagtgtcctcaagtgtggaagaggcaaagtttggcttgatcctaatgaggggaatgaaatctccatggccaattcccgccaaaacatcaggaaattggtgaaggatggtttcatcatcaggaaaccaaccaaaattcactcaagatctcgtgctcgcagaatgaaggaggccaagaggaaaggccgtcactctggatatggtaagcgcaaaggtaccagggaggctagactgcctaccaaggtgctttggatgaggagattgagagtcctcaggcgtttgcttcgcaagtatagggaatcaaagaagattgacaaacacatgtatcatgacatgtacatgaaggtgaagggtaatgttttcaagaacaagcgtgtgctgatggaaaatatccacaagacaaaggctgagaaggctagagagaagaccttgtccgaccaatttgaggctaggagggcaaagaacaaggcaagcagagaaagaaagtttgcaaggagggaagaacgtttggctcagggaccaggaggagagaagccagtacaacaacctgcagcaccagccgctgccgctccagcccagccagctcaggcatccaagaagtcgaagaaatgagcatgatgaattttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="65251" stop="62078"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64951" g_stop="64829" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="123" r_length="123" r_score="0.984"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64828" i_stop="63671" i_length="1158">
            <donor d_prob="0.998" d_score="0.96"/>
            <acceptor a_prob="0.955" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63670" g_stop="63548" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="124" r_stop="246" r_length="123" r_score="0.967"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63547" i_stop="63057" i_length="491">
            <donor d_prob="0.909" d_score="0.98"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="63056" g_stop="62743" g_length="314"/>
          <reference_exon_boundary r_type="cDNA" r_start="247" r_stop="560" r_length="314" r_score="0.994"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="62742" i_stop="62565" i_length="178">
            <donor d_prob="0.513" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.87"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="62564" g_stop="62497" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="561" r_stop="631" r_length="71" r_score="0.868"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="62496" i_stop="62417" i_length="80">
            <donor d_prob="1.000" d_score="0.81"/>
            <acceptor a_prob="0.924" a_score="0.88"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="62416" g_stop="62377" g_length="40"/>
          <reference_exon_boundary r_type="cDNA" r_start="632" r_stop="671" r_length="40" r_score="0.875"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E561086" ref_strand="+">
        <total_alignment_score>0.973</total_alignment_score>
        <cumulative_length_of_scored_exons>668</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E561086" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64951" e_stop="64829"/>
          <exon e_start="63670" e_stop="63548"/>
          <exon e_start="63056" e_stop="62743"/>
          <exon e_start="62564" e_stop="62497"/>
          <exon e_start="62416" e_stop="62377"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCCGTATGTTTCTGTTTTCTGTTTGTTATCAATATCTATTTACGTTTATGCTATCTCTTTTAATCTCTTGTTTGTATGTTATGGCTTCTGATTGTGAAAGATCTATAGTAGGTTTTGATCAGTTTAGCTCCAACGATGCTTAGGTTATGTTACTTTATCGTTTCGCCGTCTTTTCTTGTGTGGAGTGTTTAATTTTGGAATTTGATCAACCGTAGTGTTGTTTTAACCACATATACTCTGATGTCGACCAGTTCAGATCCATAGAAGCATTGATTATTTGTGTTGAGGTTTTAGGTTTGGATTTTGATCAAACATTACAATGTTTCAACTGAATATACTGTTGAGGTATATTTTTGTCGTAGAGTTTGATCAGTTAAGCTCCAGTGTACCATAGATTAATTTACTGTTACTATCAATTTGCCTTTTGTTAGAGTTGCTGTTTTGAATTTGATCAGTATACTCCTTATGCATTGTTCACAAGATTAGCAGCATACTAATGTTTTTTTATTTATGTCTACTGTGTCAGCTTAGAGTGATATTTTTTAGGTTTTTGCATTGAAAACATATTTGTTTTTGGTAAACATGATTAACAAGGATGGTTGTTCTAGTGTTAAATGGATGCGAATAAACAATTATGCTGATTTTTTGGAAAACTGAAGATGTAGTGGATTGAAATTATTGGCAGATGTGGATAGGTTATGTGACAAGTTATATTTGCTGAAGTTTTTGAGTCGTGAGATTGAAATGTAATTGAGCTGTATATGTTCATTACAACACTGTCATTGTAATTTAATCAGTAATGATGATAGGTTACTAAACAGTGGGATGAATTAACTGCAATTATCTTTGTTATTGGTAGATGTCAATATGGAAAGATACCTATTTTGTGGGATTTCATTGGGTATGTTGTTGTATTGGCAGATATTTATTTGGTGTTGCTGCTTTGCGTTATTTGCCTCTTAATCTGATGTTTAGATGACAAAGTGATATTAATGTTTACTCAATCTAGATAACTAGAACATGTTTGCTGGAACAAGCTTATTGGTTGAGCTTGTGCAAGCCAGTTGCAATCCTTGTAGCTCTCCCTATGTCATTGTGCCAACTATTTTTTGTCATATTTCTATGAACTGCCCGTAATCCCTTCCTTTCCACTTAATACAGGTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATGGTACATCCTTGTCTTGACTGTGATTGCAGAAACTCATTTTTCATGCCCTAATTCAGTTTTTAGGTAGCTCTATCAGTTTGCTGTCAACCATTGGGCATTGGTTTTTTTCTTCTTCCAAATAGTCGTTAAAATGTTAGAAGGACTTGGATTTGATAACTCATTTCTCAATCATAATAGAGAAGAATATAAGAGGTGAACTTCCTATGAGAGTCTTTGGCCATAGATGTCATCTAGGCCAATTGAAGTGAGATACAGGAAATATAAGCCTATATTTAGTGTCACTTCATCTTTTTTGTCCTAACTAAATAGTTTTGTGTACTCCATACCTCAAGAAGTTATTTCAATGTAGGCACCTTTTTGGTTGCTTGGTTTGAAAGATTATCTTGCTCATATATTAACTGGCTAGAACTATGCCATTTCTCTCTTCTTTGTAACTAATGAATATTAGCAGGTGAAATTGCTCTGTTGGCTGATGTCTGTTCTTTTCTCAGGTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGAGAAGAACGTTTGGCTCAGGTATTGTTTGAAGCTCATTAAAATTTCTAGGGAAAAGTTGGCTCTGACACTTGATGGAGTGCTCTACTCTACTCCATGTTTTATGGTTTTAAGAAACGTTTCATGCAATTATGGGATTTTATGTCCTTTTAAATAACTGCATAGGATTTTTTCTCATCTTTTCTGTTTCAAATTTCAGGGACCAGGAGGAGAGAAGCCAGTACAAC--C-TGCAGCACCAGCCGCTGCTGCACCAGCCCAGCCAGCCCAGTAAGTTCATCTGCTATATTAATTGTAGTTTCTCCTAGGGCCTAGTTTGAACATCATTTGATGAGAATATGTCTTTTCAGGGGATCTAAGAAGTCGAAGAAATGAGCGTGATGAATTGTA</genome_strand>
        <mrna_strand>CAAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAGGGGAATGAAATCTCCATGGCCAATTCCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCAAAACATCAGGAAATTGGTGAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCAAGATCTCGTGCTCGCAGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAGACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGGGAAGAACGTTTGGCTCAG..................................................................................................................................................................................GGACCAGGAGGAGAGAAGCCAGTACAACAACCTGCAGCACCAGCCGCTGCCGCTCCAGCCCAGCCAGCTCA................................................................................GGCATCCAAGAAGTCGAAGAAATGAGCATGATGAATTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E343674" ref_strand="+" ref_description="SGN-E343674 [cTOF-20-E12]">
      <seq>aaaatcgaaatggtttcgttgaagctccagaagcggctcgccgctagtgtcctcaagtgtggaagaggcaaagtttggcttgatcctaatgaaggcaatgaaatctccatggccaattcccgtcaaaacatcaggaaattggttaaggatggtttcatcatcaggaaaccaaccaaaattcactcgagatctcgtgctcgccgaatgaaggaggccaagaggaaaggccgtcactctggatatggtaagcgcaaaggtaccagggaggctagactgcctaccaaggtgctttggatgaggagattgagagtcctcaggcgtttgcttcgcaagtatagggaatcaaagaagattgacaaacacatgtatcatgacatgtacatgaaggtgaagggtaatgttttcaagaacaagcgtgtgctgatggaaaatatccacaagacaaaggctgagaaggctagagagaaaaccttgtccgaccaatttgaggctaggagggcaaagaacaaggcaagcagagaaagaaagtttgcaaggagagaagaacgtttggctcagggaccaggaggagagaagccagtacaacctgcagcaccagccgctgctgcaccagcccagccagcccagggatctaagaagtcgaagaaatgagcgtgatgaattgta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="65250" stop="62077"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64950" g_stop="64829" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="121" r_length="121" r_score="0.992"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64828" i_stop="63671" i_length="1158">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.955" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63670" g_stop="63548" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="122" r_stop="244" r_length="123" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63547" i_stop="63057" i_length="491">
            <donor d_prob="0.909" d_score="1.00"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="63056" g_stop="62743" g_length="314"/>
          <reference_exon_boundary r_type="cDNA" r_start="245" r_stop="558" r_length="314" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="62742" i_stop="62565" i_length="178">
            <donor d_prob="0.513" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="62564" g_stop="62497" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="559" r_stop="626" r_length="68" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="62496" i_stop="62417" i_length="80">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.924" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="62416" g_stop="62377" g_length="40"/>
          <reference_exon_boundary r_type="cDNA" r_start="627" r_stop="666" r_length="40" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E343674" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>667</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E343674" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64950" e_stop="64829"/>
          <exon e_start="63670" e_stop="63548"/>
          <exon e_start="63056" e_stop="62743"/>
          <exon e_start="62564" e_stop="62497"/>
          <exon e_start="62416" e_stop="62377"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCCGTATGTTTCTGTTTTCTGTTTGTTATCAATATCTATTTACGTTTATGCTATCTCTTTTAATCTCTTGTTTGTATGTTATGGCTTCTGATTGTGAAAGATCTATAGTAGGTTTTGATCAGTTTAGCTCCAACGATGCTTAGGTTATGTTACTTTATCGTTTCGCCGTCTTTTCTTGTGTGGAGTGTTTAATTTTGGAATTTGATCAACCGTAGTGTTGTTTTAACCACATATACTCTGATGTCGACCAGTTCAGATCCATAGAAGCATTGATTATTTGTGTTGAGGTTTTAGGTTTGGATTTTGATCAAACATTACAATGTTTCAACTGAATATACTGTTGAGGTATATTTTTGTCGTAGAGTTTGATCAGTTAAGCTCCAGTGTACCATAGATTAATTTACTGTTACTATCAATTTGCCTTTTGTTAGAGTTGCTGTTTTGAATTTGATCAGTATACTCCTTATGCATTGTTCACAAGATTAGCAGCATACTAATGTTTTTTTATTTATGTCTACTGTGTCAGCTTAGAGTGATATTTTTTAGGTTTTTGCATTGAAAACATATTTGTTTTTGGTAAACATGATTAACAAGGATGGTTGTTCTAGTGTTAAATGGATGCGAATAAACAATTATGCTGATTTTTTGGAAAACTGAAGATGTAGTGGATTGAAATTATTGGCAGATGTGGATAGGTTATGTGACAAGTTATATTTGCTGAAGTTTTTGAGTCGTGAGATTGAAATGTAATTGAGCTGTATATGTTCATTACAACACTGTCATTGTAATTTAATCAGTAATGATGATAGGTTACTAAACAGTGGGATGAATTAACTGCAATTATCTTTGTTATTGGTAGATGTCAATATGGAAAGATACCTATTTTGTGGGATTTCATTGGGTATGTTGTTGTATTGGCAGATATTTATTTGGTGTTGCTGCTTTGCGTTATTTGCCTCTTAATCTGATGTTTAGATGACAAAGTGATATTAATGTTTACTCAATCTAGATAACTAGAACATGTTTGCTGGAACAAGCTTATTGGTTGAGCTTGTGCAAGCCAGTTGCAATCCTTGTAGCTCTCCCTATGTCATTGTGCCAACTATTTTTTGTCATATTTCTATGAACTGCCCGTAATCCCTTCCTTTCCACTTAATACAGGTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATGGTACATCCTTGTCTTGACTGTGATTGCAGAAACTCATTTTTCATGCCCTAATTCAGTTTTTAGGTAGCTCTATCAGTTTGCTGTCAACCATTGGGCATTGGTTTTTTTCTTCTTCCAAATAGTCGTTAAAATGTTAGAAGGACTTGGATTTGATAACTCATTTCTCAATCATAATAGAGAAGAATATAAGAGGTGAACTTCCTATGAGAGTCTTTGGCCATAGATGTCATCTAGGCCAATTGAAGTGAGATACAGGAAATATAAGCCTATATTTAGTGTCACTTCATCTTTTTTGTCCTAACTAAATAGTTTTGTGTACTCCATACCTCAAGAAGTTATTTCAATGTAGGCACCTTTTTGGTTGCTTGGTTTGAAAGATTATCTTGCTCATATATTAACTGGCTAGAACTATGCCATTTCTCTCTTCTTTGTAACTAATGAATATTAGCAGGTGAAATTGCTCTGTTGGCTGATGTCTGTTCTTTTCTCAGGTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGAGAAGAACGTTTGGCTCAGGTATTGTTTGAAGCTCATTAAAATTTCTAGGGAAAAGTTGGCTCTGACACTTGATGGAGTGCTCTACTCTACTCCATGTTTTATGGTTTTAAGAAACGTTTCATGCAATTATGGGATTTTATGTCCTTTTAAATAACTGCATAGGATTTTTTCTCATCTTTTCTGTTTCAAATTTCAGGGACCAGGAGGAGAGAAGCCAGTACAACCTGCAGCACCAGCCGCTGCTGCACCAGCCCAGCCAGCCCAGTAAGTTCATCTGCTATATTAATTGTAGTTTCTCCTAGGGCCTAGTTTGAACATCATTTGATGAGAATATGTCTTTTCAGGGGATCTAAGAAGTCGAAGAAATGAGCGTGATGAATTGTA</genome_strand>
        <mrna_strand>AAAATCG-AAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGAGAAGAACGTTTGGCTCAG..................................................................................................................................................................................GGACCAGGAGGAGAGAAGCCAGTACAACCTGCAGCACCAGCCGCTGCTGCACCAGCCCAGCCAGCCCA................................................................................GGGATCTAAGAAGTCGAAGAAATGAGCGTGATGAATTGTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E476956" ref_strand="+" ref_description="SGN-E476956 [cSTB-46-B12]">
      <seq>ggaaaccaaccaaaattcactcaagatctcgtgctcgcagaatgaaggaggccaagaggaaaggccgtcactctggatatggtaagcgcaaaggtaccagggaggctagactgcctaccaaggtgctttggatgaggagattgagagtcctcaggcgtttgcttcgcaagtatagggaatcaaagaagattgacaaacacatgtatcatgacatgtacatgaaggtgaagggtaatgttttcaagaacaagcgtgtgctgatggaaaatatccacaagacaaaggctgagaaagctagagagaagaccttgtccgaccaatttgaggctaggagggcaaagaacaaggcaagcagagaaagaaagtttgcaaggagggaagaacgtttggctcagggaccaggaggagagaagccagtacaacaacctgcagcaccagccgctgccgcaccagcccagccagctcagggatctaagaagtcgaagaaatgagcatgatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="63928" stop="62084"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="63628" g_stop="63548" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="81" r_length="81" r_score="0.975"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="63547" i_stop="63057" i_length="491">
            <donor d_prob="0.909" d_score="0.98"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63056" g_stop="62743" g_length="314"/>
          <reference_exon_boundary r_type="cDNA" r_start="82" r_stop="395" r_length="314" r_score="0.990"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="62742" i_stop="62565" i_length="178">
            <donor d_prob="0.513" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.87"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="62564" g_stop="62497" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="396" r_stop="466" r_length="71" r_score="0.882"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="62496" i_stop="62417" i_length="80">
            <donor d_prob="1.000" d_score="0.83"/>
            <acceptor a_prob="0.924" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="62416" g_stop="62384" g_length="33"/>
          <reference_exon_boundary r_type="cDNA" r_start="467" r_stop="499" r_length="33" r_score="0.970"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E476956" ref_strand="+">
        <total_alignment_score>0.972</total_alignment_score>
        <cumulative_length_of_scored_exons>496</cumulative_length_of_scored_exons>
        <coverage percentage="0.994" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E476956" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="63628" e_stop="63548"/>
          <exon e_start="63056" e_stop="62743"/>
          <exon e_start="62564" e_stop="62497"/>
          <exon e_start="62416" e_stop="62384"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATGGTACATCCTTGTCTTGACTGTGATTGCAGAAACTCATTTTTCATGCCCTAATTCAGTTTTTAGGTAGCTCTATCAGTTTGCTGTCAACCATTGGGCATTGGTTTTTTTCTTCTTCCAAATAGTCGTTAAAATGTTAGAAGGACTTGGATTTGATAACTCATTTCTCAATCATAATAGAGAAGAATATAAGAGGTGAACTTCCTATGAGAGTCTTTGGCCATAGATGTCATCTAGGCCAATTGAAGTGAGATACAGGAAATATAAGCCTATATTTAGTGTCACTTCATCTTTTTTGTCCTAACTAAATAGTTTTGTGTACTCCATACCTCAAGAAGTTATTTCAATGTAGGCACCTTTTTGGTTGCTTGGTTTGAAAGATTATCTTGCTCATATATTAACTGGCTAGAACTATGCCATTTCTCTCTTCTTTGTAACTAATGAATATTAGCAGGTGAAATTGCTCTGTTGGCTGATGTCTGTTCTTTTCTCAGGTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGAGAAGAACGTTTGGCTCAGGTATTGTTTGAAGCTCATTAAAATTTCTAGGGAAAAGTTGGCTCTGACACTTGATGGAGTGCTCTACTCTACTCCATGTTTTATGGTTTTAAGAAACGTTTCATGCAATTATGGGATTTTATGTCCTTTTAAATAACTGCATAGGATTTTTTCTCATCTTTTCTGTTTCAAATTTCAGGGACCAGGAGGAGAGAAGCCAGTA---CAACCTGCAGCACCAGCCGCTGCTGCACCAGCCCAGCCAGCCCAGTAAGTTCATCTGCTATATTAATTGTAGTTTCTCCTAGGGCCTAGTTTGAACATCATTTGATGAGAATATGTCTTTTCAGGGGATCTAAGAAGTCGAAGAAATGAGCGTGATG</genome_strand>
        <mrna_strand>GGAAACCAACCAAAATTCACTCAAGATCTCGTGCTCGCAGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAAGCTAGAGAGAAGACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGGGAAGAACGTTTGGCTCAG..................................................................................................................................................................................GGACCAGGAGGAGAGAAGCCAGTACAACAACCTGCAGCACCAGCCGCTGCCGCACCAGCCCAGCCAGCTCA................................................................................GGGATCTAAGAAGTCGAAGAAATGAGCATGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E560890" ref_strand="+" ref_description="SGN-E560890 [20614]">
      <seq>caaatcgaaaatggtttcgttgaagctccagaagcggctcgccgctagtgtcctcaagtgtggaagaggaaaagtttggcttgatcctaatgaagggaatgaaatctccatggccaattcccgtcaaaacatcaggaaattggttaaggatggtttcatcatcaggaaaccaaccaaaattcactcaagatctcgtgctcgcagaatgaaggaggccaagaggaaaggccgtcactctggatatggtaagcgcaaaggtaccagggaggctagactgcctaccaaggtgctttggatgaggagattgagagtcctcaggcgtttgcttcgcaagtatagggaatcaaagaagattgacaaacacatgtatcatgacatgtacatgaaggtgaagggtaatgttttcaagaacaagcgtgtgctgatggaaaatatccacaagacaaaggctgagaaggctagagagaagaccttgtccgaccaatttgaggctaggagggcaaagaacaaggcaagcagagaaagaaagtttgcaaggagggaagaacgtttggctcagggaccaggaggagagaagccagtacaacaacctgcagcaccagctgctgccgcaccagcccagccagctcagggatctaagaagtcgaagaaatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="65249" stop="62093"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64950" g_stop="64829" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="122" r_length="122" r_score="0.975"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64828" i_stop="63671" i_length="1158">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.955" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63670" g_stop="63548" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="123" r_stop="245" r_length="123" r_score="0.984"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63547" i_stop="63057" i_length="491">
            <donor d_prob="0.909" d_score="0.98"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="63056" g_stop="62743" g_length="314"/>
          <reference_exon_boundary r_type="cDNA" r_start="246" r_stop="559" r_length="314" r_score="0.994"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="62742" i_stop="62565" i_length="178">
            <donor d_prob="0.513" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.85"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="62564" g_stop="62497" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="560" r_stop="630" r_length="71" r_score="0.868"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="62496" i_stop="62417" i_length="80">
            <donor d_prob="1.000" d_score="0.81"/>
            <acceptor a_prob="0.924" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="62416" g_stop="62393" g_length="24"/>
          <reference_exon_boundary r_type="cDNA" r_start="631" r_stop="654" r_length="24" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E560890" ref_strand="+">
        <total_alignment_score>0.974</total_alignment_score>
        <cumulative_length_of_scored_exons>651</cumulative_length_of_scored_exons>
        <coverage percentage="0.995" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E560890" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64950" e_stop="64829"/>
          <exon e_start="63670" e_stop="63548"/>
          <exon e_start="63056" e_stop="62743"/>
          <exon e_start="62564" e_stop="62497"/>
          <exon e_start="62416" e_stop="62393"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCCGTATGTTTCTGTTTTCTGTTTGTTATCAATATCTATTTACGTTTATGCTATCTCTTTTAATCTCTTGTTTGTATGTTATGGCTTCTGATTGTGAAAGATCTATAGTAGGTTTTGATCAGTTTAGCTCCAACGATGCTTAGGTTATGTTACTTTATCGTTTCGCCGTCTTTTCTTGTGTGGAGTGTTTAATTTTGGAATTTGATCAACCGTAGTGTTGTTTTAACCACATATACTCTGATGTCGACCAGTTCAGATCCATAGAAGCATTGATTATTTGTGTTGAGGTTTTAGGTTTGGATTTTGATCAAACATTACAATGTTTCAACTGAATATACTGTTGAGGTATATTTTTGTCGTAGAGTTTGATCAGTTAAGCTCCAGTGTACCATAGATTAATTTACTGTTACTATCAATTTGCCTTTTGTTAGAGTTGCTGTTTTGAATTTGATCAGTATACTCCTTATGCATTGTTCACAAGATTAGCAGCATACTAATGTTTTTTTATTTATGTCTACTGTGTCAGCTTAGAGTGATATTTTTTAGGTTTTTGCATTGAAAACATATTTGTTTTTGGTAAACATGATTAACAAGGATGGTTGTTCTAGTGTTAAATGGATGCGAATAAACAATTATGCTGATTTTTTGGAAAACTGAAGATGTAGTGGATTGAAATTATTGGCAGATGTGGATAGGTTATGTGACAAGTTATATTTGCTGAAGTTTTTGAGTCGTGAGATTGAAATGTAATTGAGCTGTATATGTTCATTACAACACTGTCATTGTAATTTAATCAGTAATGATGATAGGTTACTAAACAGTGGGATGAATTAACTGCAATTATCTTTGTTATTGGTAGATGTCAATATGGAAAGATACCTATTTTGTGGGATTTCATTGGGTATGTTGTTGTATTGGCAGATATTTATTTGGTGTTGCTGCTTTGCGTTATTTGCCTCTTAATCTGATGTTTAGATGACAAAGTGATATTAATGTTTACTCAATCTAGATAACTAGAACATGTTTGCTGGAACAAGCTTATTGGTTGAGCTTGTGCAAGCCAGTTGCAATCCTTGTAGCTCTCCCTATGTCATTGTGCCAACTATTTTTTGTCATATTTCTATGAACTGCCCGTAATCCCTTCCTTTCCACTTAATACAGGTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATGGTACATCCTTGTCTTGACTGTGATTGCAGAAACTCATTTTTCATGCCCTAATTCAGTTTTTAGGTAGCTCTATCAGTTTGCTGTCAACCATTGGGCATTGGTTTTTTTCTTCTTCCAAATAGTCGTTAAAATGTTAGAAGGACTTGGATTTGATAACTCATTTCTCAATCATAATAGAGAAGAATATAAGAGGTGAACTTCCTATGAGAGTCTTTGGCCATAGATGTCATCTAGGCCAATTGAAGTGAGATACAGGAAATATAAGCCTATATTTAGTGTCACTTCATCTTTTTTGTCCTAACTAAATAGTTTTGTGTACTCCATACCTCAAGAAGTTATTTCAATGTAGGCACCTTTTTGGTTGCTTGGTTTGAAAGATTATCTTGCTCATATATTAACTGGCTAGAACTATGCCATTTCTCTCTTCTTTGTAACTAATGAATATTAGCAGGTGAAATTGCTCTGTTGGCTGATGTCTGTTCTTTTCTCAGGTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGAGAAGAACGTTTGGCTCAGGTATTGTTTGAAGCTCATTAAAATTTCTAGGGAAAAGTTGGCTCTGACACTTGATGGAGTGCTCTACTCTACTCCATGTTTTATGGTTTTAAGAAACGTTTCATGCAATTATGGGATTTTATGTCCTTTTAAATAACTGCATAGGATTTTTTCTCATCTTTTCTGTTTCAAATTTCAGGGACCAGGAGGAGAGAAGCCAGT---ACAACCTGCAGCACCAGCCGCTGCTGCACCAGCCCAGCCAGCCCAGTAAGTTCATCTGCTATATTAATTGTAGTTTCTCCTAGGGCCTAGTTTGAACATCATTTGATGAGAATATGTCTTTTCAGGGGATCTAAGAAGTCGAAGAAATG</genome_strand>
        <mrna_strand>CAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGAAAAGTTTGGCTTGATCCTAATGAAGGGAATGAAATCTCCATGGCCAATTCCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCAAGATCTCGTGCTCGCAGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAGACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGGGAAGAACGTTTGGCTCAG..................................................................................................................................................................................GGACCAGGAGGAGAGAAGCCAGTACAACAACCTGCAGCACCAGCTGCTGCCGCACCAGCCCAGCCAGCTCA................................................................................GGGATCTAAGAAGTCGAAGAAATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E570666" ref_strand="+" ref_description="SGN-E570666 [15285]">
      <seq>caaaatcgaaaatggtttcgttgaagctccagaagcggctcgccgctagtgtcctcaagtgtggaagaggaaaagtttggcttgatcctaatgaagggaatgaaatctccatggccaattcccgtcaaaacatcaggaaattggttaaggatggtttcatcatcaggaaaccaaccaaaattcactcaagatctcgtgctcgcagaatgaaggaggccaagaggaaaggccgtcactctggatatggtaagcgcaaaggtaccagggaggctagactgcctaccaaggtgctttggatgaggagattgagagtcctcaggcgtttgcttcgcaagtatagggaatcaaagaagattgacaaacacatgtatcatgacatgtacatgaaggtgaagggtaatgttttcaagaacaagcgtgtgctgatggaaaatatccacaagacaaaggctgagaaggctagagagaagaccttgtccgaccaatttgaggctaggagggcaaagaacaaggcaagcagagaaagaaagtttgcaaggagggaagaacgtttggctcagggaccaggaggagagaagccagtacaacaacctgcagcaccagctgctgccgcaccagcccagccagctcagggatctaagaagtcgaagaaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="65251" stop="62094"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64951" g_stop="64829" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="123" r_length="123" r_score="0.984"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64828" i_stop="63671" i_length="1158">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.955" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63670" g_stop="63548" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="124" r_stop="246" r_length="123" r_score="0.984"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63547" i_stop="63057" i_length="491">
            <donor d_prob="0.909" d_score="0.98"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="63056" g_stop="62743" g_length="314"/>
          <reference_exon_boundary r_type="cDNA" r_start="247" r_stop="560" r_length="314" r_score="0.994"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="62742" i_stop="62565" i_length="178">
            <donor d_prob="0.513" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.85"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="62564" g_stop="62497" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="561" r_stop="631" r_length="71" r_score="0.868"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="62496" i_stop="62417" i_length="80">
            <donor d_prob="1.000" d_score="0.81"/>
            <acceptor a_prob="0.924" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="62416" g_stop="62394" g_length="23"/>
          <reference_exon_boundary r_type="cDNA" r_start="632" r_stop="654" r_length="23" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E570666" ref_strand="+">
        <total_alignment_score>0.976</total_alignment_score>
        <cumulative_length_of_scored_exons>651</cumulative_length_of_scored_exons>
        <coverage percentage="0.995" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E570666" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64951" e_stop="64829"/>
          <exon e_start="63670" e_stop="63548"/>
          <exon e_start="63056" e_stop="62743"/>
          <exon e_start="62564" e_stop="62497"/>
          <exon e_start="62416" e_stop="62394"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCCGTATGTTTCTGTTTTCTGTTTGTTATCAATATCTATTTACGTTTATGCTATCTCTTTTAATCTCTTGTTTGTATGTTATGGCTTCTGATTGTGAAAGATCTATAGTAGGTTTTGATCAGTTTAGCTCCAACGATGCTTAGGTTATGTTACTTTATCGTTTCGCCGTCTTTTCTTGTGTGGAGTGTTTAATTTTGGAATTTGATCAACCGTAGTGTTGTTTTAACCACATATACTCTGATGTCGACCAGTTCAGATCCATAGAAGCATTGATTATTTGTGTTGAGGTTTTAGGTTTGGATTTTGATCAAACATTACAATGTTTCAACTGAATATACTGTTGAGGTATATTTTTGTCGTAGAGTTTGATCAGTTAAGCTCCAGTGTACCATAGATTAATTTACTGTTACTATCAATTTGCCTTTTGTTAGAGTTGCTGTTTTGAATTTGATCAGTATACTCCTTATGCATTGTTCACAAGATTAGCAGCATACTAATGTTTTTTTATTTATGTCTACTGTGTCAGCTTAGAGTGATATTTTTTAGGTTTTTGCATTGAAAACATATTTGTTTTTGGTAAACATGATTAACAAGGATGGTTGTTCTAGTGTTAAATGGATGCGAATAAACAATTATGCTGATTTTTTGGAAAACTGAAGATGTAGTGGATTGAAATTATTGGCAGATGTGGATAGGTTATGTGACAAGTTATATTTGCTGAAGTTTTTGAGTCGTGAGATTGAAATGTAATTGAGCTGTATATGTTCATTACAACACTGTCATTGTAATTTAATCAGTAATGATGATAGGTTACTAAACAGTGGGATGAATTAACTGCAATTATCTTTGTTATTGGTAGATGTCAATATGGAAAGATACCTATTTTGTGGGATTTCATTGGGTATGTTGTTGTATTGGCAGATATTTATTTGGTGTTGCTGCTTTGCGTTATTTGCCTCTTAATCTGATGTTTAGATGACAAAGTGATATTAATGTTTACTCAATCTAGATAACTAGAACATGTTTGCTGGAACAAGCTTATTGGTTGAGCTTGTGCAAGCCAGTTGCAATCCTTGTAGCTCTCCCTATGTCATTGTGCCAACTATTTTTTGTCATATTTCTATGAACTGCCCGTAATCCCTTCCTTTCCACTTAATACAGGTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATGGTACATCCTTGTCTTGACTGTGATTGCAGAAACTCATTTTTCATGCCCTAATTCAGTTTTTAGGTAGCTCTATCAGTTTGCTGTCAACCATTGGGCATTGGTTTTTTTCTTCTTCCAAATAGTCGTTAAAATGTTAGAAGGACTTGGATTTGATAACTCATTTCTCAATCATAATAGAGAAGAATATAAGAGGTGAACTTCCTATGAGAGTCTTTGGCCATAGATGTCATCTAGGCCAATTGAAGTGAGATACAGGAAATATAAGCCTATATTTAGTGTCACTTCATCTTTTTTGTCCTAACTAAATAGTTTTGTGTACTCCATACCTCAAGAAGTTATTTCAATGTAGGCACCTTTTTGGTTGCTTGGTTTGAAAGATTATCTTGCTCATATATTAACTGGCTAGAACTATGCCATTTCTCTCTTCTTTGTAACTAATGAATATTAGCAGGTGAAATTGCTCTGTTGGCTGATGTCTGTTCTTTTCTCAGGTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGAGAAGAACGTTTGGCTCAGGTATTGTTTGAAGCTCATTAAAATTTCTAGGGAAAAGTTGGCTCTGACACTTGATGGAGTGCTCTACTCTACTCCATGTTTTATGGTTTTAAGAAACGTTTCATGCAATTATGGGATTTTATGTCCTTTTAAATAACTGCATAGGATTTTTTCTCATCTTTTCTGTTTCAAATTTCAGGGACCAGGAGGAGAGAAGCCAGT---ACAACCTGCAGCACCAGCCGCTGCTGCACCAGCCCAGCCAGCCCAGTAAGTTCATCTGCTATATTAATTGTAGTTTCTCCTAGGGCCTAGTTTGAACATCATTTGATGAGAATATGTCTTTTCAGGGGATCTAAGAAGTCGAAGAAAT</genome_strand>
        <mrna_strand>CAAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGAAAAGTTTGGCTTGATCCTAATGAAGGGAATGAAATCTCCATGGCCAATTCCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCAAGATCTCGTGCTCGCAGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAGACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGGGAAGAACGTTTGGCTCAG..................................................................................................................................................................................GGACCAGGAGGAGAGAAGCCAGTACAACAACCTGCAGCACCAGCTGCTGCCGCACCAGCCCAGCCAGCTCA................................................................................GGGATCTAAGAAGTCGAAGAAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E568924" ref_strand="+" ref_description="SGN-E568924 [13282]">
      <seq>caaaatcgaaaatggtttcgttgaagctccagaagcggctcgccgctagtgtcctcaagtgtggaagaggaaaagtttggcttgatcctaatgaagggaatgaaatctccatggccaattcccgtcaaaacatcaggaaattggttaaggatggtttcatcatcaggaaaccaaccaaaattcactcaagatctcgtgctcgcagaatgaaggaggccaagaggaaaggccgtcactctggatatggtaagcgcaaaggtaccagggaggctagactgcctaccaaggtgctttggatgaggagattgagagtcctcaggcgtttgcttcgcaagtatagggaatcaaagaagattgacaaacacatgtatcatgacatgtacatgaaggtgaagggtaatgttttcaagaacaagcgtgtgctgatggaaaatatccacaagacaaaggctgagaaggctagagagaagaccttgtccgaccaatttgaggctaggagggcaaagaacaaggcaagcagagaaagaaagtttgcaaggagggaagaacgtttggctcagggaccaggaggagagaagccagtacaacaacctgcagcaccagctgctgccngacagcccagccagctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="65251" stop="62218"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64951" g_stop="64829" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="123" r_length="123" r_score="0.984"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64828" i_stop="63671" i_length="1158">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.955" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63670" g_stop="63548" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="124" r_stop="246" r_length="123" r_score="0.984"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63547" i_stop="63057" i_length="491">
            <donor d_prob="0.909" d_score="0.98"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="63056" g_stop="62743" g_length="314"/>
          <reference_exon_boundary r_type="cDNA" r_start="247" r_stop="560" r_length="314" r_score="0.994"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="62742" i_stop="62565" i_length="178">
            <donor d_prob="0.513" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.85"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="62564" g_stop="62498" g_length="67"/>
          <reference_exon_boundary r_type="cDNA" r_start="561" r_stop="629" r_length="69" r_score="0.821"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E568924" ref_strand="+">
        <total_alignment_score>0.971</total_alignment_score>
        <cumulative_length_of_scored_exons>627</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E568924" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64951" e_stop="64829"/>
          <exon e_start="63670" e_stop="63548"/>
          <exon e_start="63056" e_stop="62743"/>
          <exon e_start="62564" e_stop="62498"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCCGTATGTTTCTGTTTTCTGTTTGTTATCAATATCTATTTACGTTTATGCTATCTCTTTTAATCTCTTGTTTGTATGTTATGGCTTCTGATTGTGAAAGATCTATAGTAGGTTTTGATCAGTTTAGCTCCAACGATGCTTAGGTTATGTTACTTTATCGTTTCGCCGTCTTTTCTTGTGTGGAGTGTTTAATTTTGGAATTTGATCAACCGTAGTGTTGTTTTAACCACATATACTCTGATGTCGACCAGTTCAGATCCATAGAAGCATTGATTATTTGTGTTGAGGTTTTAGGTTTGGATTTTGATCAAACATTACAATGTTTCAACTGAATATACTGTTGAGGTATATTTTTGTCGTAGAGTTTGATCAGTTAAGCTCCAGTGTACCATAGATTAATTTACTGTTACTATCAATTTGCCTTTTGTTAGAGTTGCTGTTTTGAATTTGATCAGTATACTCCTTATGCATTGTTCACAAGATTAGCAGCATACTAATGTTTTTTTATTTATGTCTACTGTGTCAGCTTAGAGTGATATTTTTTAGGTTTTTGCATTGAAAACATATTTGTTTTTGGTAAACATGATTAACAAGGATGGTTGTTCTAGTGTTAAATGGATGCGAATAAACAATTATGCTGATTTTTTGGAAAACTGAAGATGTAGTGGATTGAAATTATTGGCAGATGTGGATAGGTTATGTGACAAGTTATATTTGCTGAAGTTTTTGAGTCGTGAGATTGAAATGTAATTGAGCTGTATATGTTCATTACAACACTGTCATTGTAATTTAATCAGTAATGATGATAGGTTACTAAACAGTGGGATGAATTAACTGCAATTATCTTTGTTATTGGTAGATGTCAATATGGAAAGATACCTATTTTGTGGGATTTCATTGGGTATGTTGTTGTATTGGCAGATATTTATTTGGTGTTGCTGCTTTGCGTTATTTGCCTCTTAATCTGATGTTTAGATGACAAAGTGATATTAATGTTTACTCAATCTAGATAACTAGAACATGTTTGCTGGAACAAGCTTATTGGTTGAGCTTGTGCAAGCCAGTTGCAATCCTTGTAGCTCTCCCTATGTCATTGTGCCAACTATTTTTTGTCATATTTCTATGAACTGCCCGTAATCCCTTCCTTTCCACTTAATACAGGTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATGGTACATCCTTGTCTTGACTGTGATTGCAGAAACTCATTTTTCATGCCCTAATTCAGTTTTTAGGTAGCTCTATCAGTTTGCTGTCAACCATTGGGCATTGGTTTTTTTCTTCTTCCAAATAGTCGTTAAAATGTTAGAAGGACTTGGATTTGATAACTCATTTCTCAATCATAATAGAGAAGAATATAAGAGGTGAACTTCCTATGAGAGTCTTTGGCCATAGATGTCATCTAGGCCAATTGAAGTGAGATACAGGAAATATAAGCCTATATTTAGTGTCACTTCATCTTTTTTGTCCTAACTAAATAGTTTTGTGTACTCCATACCTCAAGAAGTTATTTCAATGTAGGCACCTTTTTGGTTGCTTGGTTTGAAAGATTATCTTGCTCATATATTAACTGGCTAGAACTATGCCATTTCTCTCTTCTTTGTAACTAATGAATATTAGCAGGTGAAATTGCTCTGTTGGCTGATGTCTGTTCTTTTCTCAGGTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGAGAAGAACGTTTGGCTCAGGTATTGTTTGAAGCTCATTAAAATTTCTAGGGAAAAGTTGGCTCTGACACTTGATGGAGTGCTCTACTCTACTCCATGTTTTATGGTTTTAAGAAACGTTTCATGCAATTATGGGATTTTATGTCCTTTTAAATAACTGCATAGGATTTTTTCTCATCTTTTCTGTTTCAAATTTCAGGGACCAGGAGGAGAGAAGCCAGT---ACAACCTGCAGCACCAGCCGCTGCTGCACCAGCCCAGCCAGCCC</genome_strand>
        <mrna_strand>CAAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGAAAAGTTTGGCTTGATCCTAATGAAGGGAATGAAATCTCCATGGCCAATTCCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCAAGATCTCGTGCTCGCAGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAGACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGGGAAGAACGTTTGGCTCAG..................................................................................................................................................................................GGACCAGGAGGAGAGAAGCCAGTACAACAACCTGCAGCACCAGCTGCTGCCNGA-CAGCCCAGCCAGCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E578531" ref_strand="+" ref_description="SGN-E578531 [85649]">
      <seq>ttcggcacgaggacaaaatcgaaaatggtttcgttgaagctccagaaanagcggctcgccgctagtgtcctcaagtgtggaagaggaaaagtttggcttgatcctaatgaagggaatgaaatctccatggccaattcccgtcaaaacatcaggaaattggttaaggatggtttcatcatcaggaaaaccaaccaaaattcacctcaagatctcgtgctcgcaaaatgaaggaggccaagaggaaaggccgtcactctggatatggtaagcgcaaaggtaccagggaggctagactgcctaccaaggtgctttggatgaggagattgagagtcctcaggcgtttgcttcgcaagtatagggaatcaaagaagattgacaaacacatgtatcatgacatgtacatgaaggtgaagggtaatgttttcaagaacaagcgtgtgctgatggaaaatatccacaagacaaaggctgagaaggctagagagaagaccttgtccgaccaatttgaggctaggagggcaaagaacaaggcaagcagagaaagaaagtttgcaaggagggaagaacgtttggctcaggcaccaggaggagagaagccagtacaacaacctgcagcaccagctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="65252" stop="62222"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64956" g_stop="64829" g_length="128"/>
          <reference_exon_boundary r_type="cDNA" r_start="9" r_stop="139" r_length="131" r_score="0.906"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64828" i_stop="63671" i_length="1158">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.955" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63670" g_stop="63548" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="140" r_stop="264" r_length="125" r_score="0.943"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63547" i_stop="63057" i_length="491">
            <donor d_prob="0.909" d_score="0.96"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="63056" g_stop="62743" g_length="314"/>
          <reference_exon_boundary r_type="cDNA" r_start="265" r_stop="578" r_length="314" r_score="0.994"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="62742" i_stop="62565" i_length="178">
            <donor d_prob="0.513" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.83"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="62564" g_stop="62519" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="579" r_stop="624" r_length="46" r_score="0.826"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E578531" ref_strand="+">
        <total_alignment_score>0.963</total_alignment_score>
        <cumulative_length_of_scored_exons>611</cumulative_length_of_scored_exons>
        <coverage percentage="0.979" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E578531" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64956" e_stop="64829"/>
          <exon e_start="63670" e_stop="63548"/>
          <exon e_start="63056" e_stop="62743"/>
          <exon e_start="62564" e_stop="62519"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTCACAAAATCGAAAATGGTTTCGTTGAAGCTCCAG--A-AGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCCGTATGTTTCTGTTTTCTGTTTGTTATCAATATCTATTTACGTTTATGCTATCTCTTTTAATCTCTTGTTTGTATGTTATGGCTTCTGATTGTGAAAGATCTATAGTAGGTTTTGATCAGTTTAGCTCCAACGATGCTTAGGTTATGTTACTTTATCGTTTCGCCGTCTTTTCTTGTGTGGAGTGTTTAATTTTGGAATTTGATCAACCGTAGTGTTGTTTTAACCACATATACTCTGATGTCGACCAGTTCAGATCCATAGAAGCATTGATTATTTGTGTTGAGGTTTTAGGTTTGGATTTTGATCAAACATTACAATGTTTCAACTGAATATACTGTTGAGGTATATTTTTGTCGTAGAGTTTGATCAGTTAAGCTCCAGTGTACCATAGATTAATTTACTGTTACTATCAATTTGCCTTTTGTTAGAGTTGCTGTTTTGAATTTGATCAGTATACTCCTTATGCATTGTTCACAAGATTAGCAGCATACTAATGTTTTTTTATTTATGTCTACTGTGTCAGCTTAGAGTGATATTTTTTAGGTTTTTGCATTGAAAACATATTTGTTTTTGGTAAACATGATTAACAAGGATGGTTGTTCTAGTGTTAAATGGATGCGAATAAACAATTATGCTGATTTTTTGGAAAACTGAAGATGTAGTGGATTGAAATTATTGGCAGATGTGGATAGGTTATGTGACAAGTTATATTTGCTGAAGTTTTTGAGTCGTGAGATTGAAATGTAATTGAGCTGTATATGTTCATTACAACACTGTCATTGTAATTTAATCAGTAATGATGATAGGTTACTAAACAGTGGGATGAATTAACTGCAATTATCTTTGTTATTGGTAGATGTCAATATGGAAAGATACCTATTTTGTGGGATTTCATTGGGTATGTTGTTGTATTGGCAGATATTTATTTGGTGTTGCTGCTTTGCGTTATTTGCCTCTTAATCTGATGTTTAGATGACAAAGTGATATTAATGTTTACTCAATCTAGATAACTAGAACATGTTTGCTGGAACAAGCTTATTGGTTGAGCTTGTGCAAGCCAGTTGCAATCCTTGTAGCTCTCCCTATGTCATTGTGCCAACTATTTTTTGTCATATTTCTATGAACTGCCCGTAATCCCTTCCTTTCCACTTAATACAGGTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGG-AAACCAACCAAAATTCA-CTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATGGTACATCCTTGTCTTGACTGTGATTGCAGAAACTCATTTTTCATGCCCTAATTCAGTTTTTAGGTAGCTCTATCAGTTTGCTGTCAACCATTGGGCATTGGTTTTTTTCTTCTTCCAAATAGTCGTTAAAATGTTAGAAGGACTTGGATTTGATAACTCATTTCTCAATCATAATAGAGAAGAATATAAGAGGTGAACTTCCTATGAGAGTCTTTGGCCATAGATGTCATCTAGGCCAATTGAAGTGAGATACAGGAAATATAAGCCTATATTTAGTGTCACTTCATCTTTTTTGTCCTAACTAAATAGTTTTGTGTACTCCATACCTCAAGAAGTTATTTCAATGTAGGCACCTTTTTGGTTGCTTGGTTTGAAAGATTATCTTGCTCATATATTAACTGGCTAGAACTATGCCATTTCTCTCTTCTTTGTAACTAATGAATATTAGCAGGTGAAATTGCTCTGTTGGCTGATGTCTGTTCTTTTCTCAGGTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGAGAAGAACGTTTGGCTCAGGTATTGTTTGAAGCTCATTAAAATTTCTAGGGAAAAGTTGGCTCTGACACTTGATGGAGTGCTCTACTCTACTCCATGTTTTATGGTTTTAAGAAACGTTTCATGCAATTATGGGATTTTATGTCCTTTTAAATAACTGCATAGGATTTTTTCTCATCTTTTCTGTTTCAAATTTCAGGGACCAGGAGGAGAGAAGCCAGTACAACCTGCAGCACCAGCCGCTG</genome_strand>
        <mrna_strand>GAGGACAAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAANAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGAAAAGTTTGGCTTGATCCTAATGAAGGGAATGAAATCTCCATGGCCAATTCCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAAACCAACCAAAATTCACCTCAAGATCTCGTGCTCGCAAAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAGACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGGGAAGAACGTTTGGCTCAG..................................................................................................................................................................................GCACCAGGAGGAGAGAAGCCAGTACAACAACCTGCAGCACCAGCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E348309" ref_strand="+" ref_description="SGN-E348309 [cTOF-27-N5]">
      <seq>acaaaatcgaaaatggtttcgttgaagctccagaagcggctcgccgctagtgtcctcaagtgtggaagaggcaaagtttggcttgatcctaatgaaggcaatgaaatctccatggccaattcccgtcaaaacatcaggaaattggttaaggatggtttcatcatcaggaaaccaaccaaaattcactcgagatctcgtgctcgccgaatgaaggaggccaagaggaaaggccgtcactctggatatggtaagcgcaaaggtaccagggaggctagactgcctaccaaggtgctttggatgaggagattgagagtcctcaggcgtttgcttcgcaagtatagggaatcaaagaagattgacaaacacatgtatcatgacatgtacatgaaggtgaagggtaatgttttcaagaacaagcgtgtgctgatggaaaatatccacaagacaaaggctgagaaggctagagagaaaaccttgtccgaccaatttgaggctaggagggcaaagaacaaggcaagcagagaaagaaagtttgcaaggagagaagaacgtttggctcanggaccaggaggagagaagccagtacaacctgcagcaccagcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="65252" stop="62223"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64952" g_stop="64829" g_length="124"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="124" r_length="124" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64828" i_stop="63671" i_length="1158">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.955" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63670" g_stop="63548" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="125" r_stop="247" r_length="123" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63547" i_stop="63057" i_length="491">
            <donor d_prob="0.909" d_score="1.00"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="63056" g_stop="62743" g_length="314"/>
          <reference_exon_boundary r_type="cDNA" r_start="248" r_stop="561" r_length="314" r_score="0.997"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="62742" i_stop="62565" i_length="178">
            <donor d_prob="0.513" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="62564" g_stop="62523" g_length="42"/>
          <reference_exon_boundary r_type="cDNA" r_start="562" r_stop="603" r_length="42" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E348309" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>603</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E348309" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64952" e_stop="64829"/>
          <exon e_start="63670" e_stop="63548"/>
          <exon e_start="63056" e_stop="62743"/>
          <exon e_start="62564" e_stop="62523"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACAAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCCGTATGTTTCTGTTTTCTGTTTGTTATCAATATCTATTTACGTTTATGCTATCTCTTTTAATCTCTTGTTTGTATGTTATGGCTTCTGATTGTGAAAGATCTATAGTAGGTTTTGATCAGTTTAGCTCCAACGATGCTTAGGTTATGTTACTTTATCGTTTCGCCGTCTTTTCTTGTGTGGAGTGTTTAATTTTGGAATTTGATCAACCGTAGTGTTGTTTTAACCACATATACTCTGATGTCGACCAGTTCAGATCCATAGAAGCATTGATTATTTGTGTTGAGGTTTTAGGTTTGGATTTTGATCAAACATTACAATGTTTCAACTGAATATACTGTTGAGGTATATTTTTGTCGTAGAGTTTGATCAGTTAAGCTCCAGTGTACCATAGATTAATTTACTGTTACTATCAATTTGCCTTTTGTTAGAGTTGCTGTTTTGAATTTGATCAGTATACTCCTTATGCATTGTTCACAAGATTAGCAGCATACTAATGTTTTTTTATTTATGTCTACTGTGTCAGCTTAGAGTGATATTTTTTAGGTTTTTGCATTGAAAACATATTTGTTTTTGGTAAACATGATTAACAAGGATGGTTGTTCTAGTGTTAAATGGATGCGAATAAACAATTATGCTGATTTTTTGGAAAACTGAAGATGTAGTGGATTGAAATTATTGGCAGATGTGGATAGGTTATGTGACAAGTTATATTTGCTGAAGTTTTTGAGTCGTGAGATTGAAATGTAATTGAGCTGTATATGTTCATTACAACACTGTCATTGTAATTTAATCAGTAATGATGATAGGTTACTAAACAGTGGGATGAATTAACTGCAATTATCTTTGTTATTGGTAGATGTCAATATGGAAAGATACCTATTTTGTGGGATTTCATTGGGTATGTTGTTGTATTGGCAGATATTTATTTGGTGTTGCTGCTTTGCGTTATTTGCCTCTTAATCTGATGTTTAGATGACAAAGTGATATTAATGTTTACTCAATCTAGATAACTAGAACATGTTTGCTGGAACAAGCTTATTGGTTGAGCTTGTGCAAGCCAGTTGCAATCCTTGTAGCTCTCCCTATGTCATTGTGCCAACTATTTTTTGTCATATTTCTATGAACTGCCCGTAATCCCTTCCTTTCCACTTAATACAGGTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATGGTACATCCTTGTCTTGACTGTGATTGCAGAAACTCATTTTTCATGCCCTAATTCAGTTTTTAGGTAGCTCTATCAGTTTGCTGTCAACCATTGGGCATTGGTTTTTTTCTTCTTCCAAATAGTCGTTAAAATGTTAGAAGGACTTGGATTTGATAACTCATTTCTCAATCATAATAGAGAAGAATATAAGAGGTGAACTTCCTATGAGAGTCTTTGGCCATAGATGTCATCTAGGCCAATTGAAGTGAGATACAGGAAATATAAGCCTATATTTAGTGTCACTTCATCTTTTTTGTCCTAACTAAATAGTTTTGTGTACTCCATACCTCAAGAAGTTATTTCAATGTAGGCACCTTTTTGGTTGCTTGGTTTGAAAGATTATCTTGCTCATATATTAACTGGCTAGAACTATGCCATTTCTCTCTTCTTTGTAACTAATGAATATTAGCAGGTGAAATTGCTCTGTTGGCTGATGTCTGTTCTTTTCTCAGGTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGAGAAGAACGTTTGGCTCAGGTATTGTTTGAAGCTCATTAAAATTTCTAGGGAAAAGTTGGCTCTGACACTTGATGGAGTGCTCTACTCTACTCCATGTTTTATGGTTTTAAGAAACGTTTCATGCAATTATGGGATTTTATGTCCTTTTAAATAACTGCATAGGATTTTTTCTCATCTTTTCTGTTTCAAATTTCAGGGACCAGGAGGAGAGAAGCCAGTACAACCTGCAGCACCAGCC</genome_strand>
        <mrna_strand>ACAAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGAGAAGAACGTTTGGCTCAN..................................................................................................................................................................................GGACCAGGAGGAGAGAAGCCAGTACAACCTGCAGCACCAGCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E573552" ref_strand="+" ref_description="SGN-E573552 [32880]">
      <seq>aaatcgaaaatggtttcgttgaagctccagaagcggctcgccgctagtgtcctcaagtgtggaagaggaaaagtttggcttgatcctaatgaagggaatgaaatctccatggccaattcccgtcaaaacatcaggaaattggttaaggatggtttcatcatcaggaaaccaaccaaaattcactcaagatctcgtgctcgcagaatgaatgaggccaagaggaaaggccgtcactctggatatggtaagcgcaaaggtaccagggaggctagactgcctaccaaggtgctttggatgaggagattgagagtcctcaggcgtttgcttcgcaagtatagggaatcaaagaagattgacaaacacatgtatcatgacatgtacatgaaggtgaagggtaatgttttcaagaacaagcgtgtgctgatggaaaatatccacaagacaaaggctgagaaggctagagagaagaccttgtccgaccaatttgaggctagagggcaaagaacaaggcaagcagagaaagaacagtttgcaacggagggaagaacgtatggctcagggaccaggaggagagaagcagtacaacaacctgcagc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="65249" stop="62237"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64949" g_stop="64829" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="121" r_length="121" r_score="0.983"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64828" i_stop="63671" i_length="1158">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.955" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63670" g_stop="63548" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="122" r_stop="244" r_length="123" r_score="0.976"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63547" i_stop="63057" i_length="491">
            <donor d_prob="0.909" d_score="0.96"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="63056" g_stop="62743" g_length="314"/>
          <reference_exon_boundary r_type="cDNA" r_start="245" r_stop="559" r_length="315" r_score="0.975"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="62742" i_stop="62565" i_length="178">
            <donor d_prob="0.513" d_score="0.88"/>
            <acceptor a_prob="1.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="62564" g_stop="62527" g_length="38"/>
          <reference_exon_boundary r_type="cDNA" r_start="560" r_stop="596" r_length="37" r_score="0.842"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E573552" ref_strand="+">
        <total_alignment_score>0.977</total_alignment_score>
        <cumulative_length_of_scored_exons>596</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E573552" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64949" e_stop="64829"/>
          <exon e_start="63670" e_stop="63548"/>
          <exon e_start="63056" e_stop="62743"/>
          <exon e_start="62564" e_stop="62527"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCCGTATGTTTCTGTTTTCTGTTTGTTATCAATATCTATTTACGTTTATGCTATCTCTTTTAATCTCTTGTTTGTATGTTATGGCTTCTGATTGTGAAAGATCTATAGTAGGTTTTGATCAGTTTAGCTCCAACGATGCTTAGGTTATGTTACTTTATCGTTTCGCCGTCTTTTCTTGTGTGGAGTGTTTAATTTTGGAATTTGATCAACCGTAGTGTTGTTTTAACCACATATACTCTGATGTCGACCAGTTCAGATCCATAGAAGCATTGATTATTTGTGTTGAGGTTTTAGGTTTGGATTTTGATCAAACATTACAATGTTTCAACTGAATATACTGTTGAGGTATATTTTTGTCGTAGAGTTTGATCAGTTAAGCTCCAGTGTACCATAGATTAATTTACTGTTACTATCAATTTGCCTTTTGTTAGAGTTGCTGTTTTGAATTTGATCAGTATACTCCTTATGCATTGTTCACAAGATTAGCAGCATACTAATGTTTTTTTATTTATGTCTACTGTGTCAGCTTAGAGTGATATTTTTTAGGTTTTTGCATTGAAAACATATTTGTTTTTGGTAAACATGATTAACAAGGATGGTTGTTCTAGTGTTAAATGGATGCGAATAAACAATTATGCTGATTTTTTGGAAAACTGAAGATGTAGTGGATTGAAATTATTGGCAGATGTGGATAGGTTATGTGACAAGTTATATTTGCTGAAGTTTTTGAGTCGTGAGATTGAAATGTAATTGAGCTGTATATGTTCATTACAACACTGTCATTGTAATTTAATCAGTAATGATGATAGGTTACTAAACAGTGGGATGAATTAACTGCAATTATCTTTGTTATTGGTAGATGTCAATATGGAAAGATACCTATTTTGTGGGATTTCATTGGGTATGTTGTTGTATTGGCAGATATTTATTTGGTGTTGCTGCTTTGCGTTATTTGCCTCTTAATCTGATGTTTAGATGACAAAGTGATATTAATGTTTACTCAATCTAGATAACTAGAACATGTTTGCTGGAACAAGCTTATTGGTTGAGCTTGTGCAAGCCAGTTGCAATCCTTGTAGCTCTCCCTATGTCATTGTGCCAACTATTTTTTGTCATATTTCTATGAACTGCCCGTAATCCCTTCCTTTCCACTTAATACAGGTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATGGTACATCCTTGTCTTGACTGTGATTGCAGAAACTCATTTTTCATGCCCTAATTCAGTTTTTAGGTAGCTCTATCAGTTTGCTGTCAACCATTGGGCATTGGTTTTTTTCTTCTTCCAAATAGTCGTTAAAATGTTAGAAGGACTTGGATTTGATAACTCATTTCTCAATCATAATAGAGAAGAATATAAGAGGTGAACTTCCTATGAGAGTCTTTGGCCATAGATGTCATCTAGGCCAATTGAAGTGAGATACAGGAAATATAAGCCTATATTTAGTGTCACTTCATCTTTTTTGTCCTAACTAAATAGTTTTGTGTACTCCATACCTCAAGAAGTTATTTCAATGTAGGCACCTTTTTGGTTGCTTGGTTTGAAAGATTATCTTGCTCATATATTAACTGGCTAGAACTATGCCATTTCTCTCTTCTTTGTAACTAATGAATATTAGCAGGTGAAATTGCTCTGTTGGCTGATGTCTGTTCTTTTCTCAGGTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAA-AGTTTGCAA-GGAGAGAAGAACGTTTGGCTCAGGTATTGTTTGAAGCTCATTAAAATTTCTAGGGAAAAGTTGGCTCTGACACTTGATGGAGTGCTCTACTCTACTCCATGTTTTATGGTTTTAAGAAACGTTTCATGCAATTATGGGATTTTATGTCCTTTTAAATAACTGCATAGGATTTTTTCTCATCTTTTCTGTTTCAAATTTCAGGGACCAGGAGGAGAGAAGCCAGTACAACCTGCAGCACC</genome_strand>
        <mrna_strand>AAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGAAAAGTTTGGCTTGATCCTAATGAAGGGAATGAAATCTCCATGGCCAATTCCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCAAGATCTCGTGCTCGCAGAATGAATGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAGACCTTGTCCGACCAATTTGAGGCTA-GAGGGCAAAGAACAAGGCAAGCAGAGAAAGAACAGTTTGCAACGGAGGGAAGAACGTATGGCTCAG..................................................................................................................................................................................GGACCAGGAGGAGAGAAG-CAGTACAACAACCTGCAGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E291062" ref_strand="+" ref_description="SGN-E291062 [cLET-8-I21]">
      <seq>aaaatcgaaaatggtttcgttgaagctccagaagcggctcgccgctagtgtcctcaagtgtggaagaggcaaagtttggcttgatcctaatgaaggcaatgaaatctccatggccaattcccgtcaaaacatcaggaaattggttaaggatggtttcatcatcaggaaaccaaccaaaattcactcgagatctcgtgctcgccgaatgaaggaggccaagaggaaaggccgtcactctggatatggtaagcgcaaaggtaccagggaggctagactgcctaccaaggtgctttggatgaggagattgagagtcctcaggcgtttgcttcgcaagtatagggaatcaaagaagattgacaaacacatgtatcatgacatgtacatgaaggtgaagggtaatgttttcaagaacaagcgtgtgctgatggaaaatatccacaagacaaaggctgagaaggctagagagaaaaccttgtccgaccaatttgaggctaggagggcaaagaacaaggcaagcagagaaagaaagtttgcaaggagagaagaacgtttggctcaaggaccaggaggagagaagcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="65250" stop="62245"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64950" g_stop="64829" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="122" r_length="122" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64828" i_stop="63671" i_length="1158">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.955" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63670" g_stop="63548" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="123" r_stop="245" r_length="123" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63547" i_stop="63057" i_length="491">
            <donor d_prob="0.909" d_score="1.00"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="63056" g_stop="62743" g_length="314"/>
          <reference_exon_boundary r_type="cDNA" r_start="246" r_stop="559" r_length="314" r_score="0.997"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="62742" i_stop="62565" i_length="178">
            <donor d_prob="0.513" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="62564" g_stop="62545" g_length="20"/>
          <reference_exon_boundary r_type="cDNA" r_start="560" r_stop="579" r_length="20" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E291062" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>579</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E291062" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64950" e_stop="64829"/>
          <exon e_start="63670" e_stop="63548"/>
          <exon e_start="63056" e_stop="62743"/>
          <exon e_start="62564" e_stop="62545"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCCGTATGTTTCTGTTTTCTGTTTGTTATCAATATCTATTTACGTTTATGCTATCTCTTTTAATCTCTTGTTTGTATGTTATGGCTTCTGATTGTGAAAGATCTATAGTAGGTTTTGATCAGTTTAGCTCCAACGATGCTTAGGTTATGTTACTTTATCGTTTCGCCGTCTTTTCTTGTGTGGAGTGTTTAATTTTGGAATTTGATCAACCGTAGTGTTGTTTTAACCACATATACTCTGATGTCGACCAGTTCAGATCCATAGAAGCATTGATTATTTGTGTTGAGGTTTTAGGTTTGGATTTTGATCAAACATTACAATGTTTCAACTGAATATACTGTTGAGGTATATTTTTGTCGTAGAGTTTGATCAGTTAAGCTCCAGTGTACCATAGATTAATTTACTGTTACTATCAATTTGCCTTTTGTTAGAGTTGCTGTTTTGAATTTGATCAGTATACTCCTTATGCATTGTTCACAAGATTAGCAGCATACTAATGTTTTTTTATTTATGTCTACTGTGTCAGCTTAGAGTGATATTTTTTAGGTTTTTGCATTGAAAACATATTTGTTTTTGGTAAACATGATTAACAAGGATGGTTGTTCTAGTGTTAAATGGATGCGAATAAACAATTATGCTGATTTTTTGGAAAACTGAAGATGTAGTGGATTGAAATTATTGGCAGATGTGGATAGGTTATGTGACAAGTTATATTTGCTGAAGTTTTTGAGTCGTGAGATTGAAATGTAATTGAGCTGTATATGTTCATTACAACACTGTCATTGTAATTTAATCAGTAATGATGATAGGTTACTAAACAGTGGGATGAATTAACTGCAATTATCTTTGTTATTGGTAGATGTCAATATGGAAAGATACCTATTTTGTGGGATTTCATTGGGTATGTTGTTGTATTGGCAGATATTTATTTGGTGTTGCTGCTTTGCGTTATTTGCCTCTTAATCTGATGTTTAGATGACAAAGTGATATTAATGTTTACTCAATCTAGATAACTAGAACATGTTTGCTGGAACAAGCTTATTGGTTGAGCTTGTGCAAGCCAGTTGCAATCCTTGTAGCTCTCCCTATGTCATTGTGCCAACTATTTTTTGTCATATTTCTATGAACTGCCCGTAATCCCTTCCTTTCCACTTAATACAGGTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATGGTACATCCTTGTCTTGACTGTGATTGCAGAAACTCATTTTTCATGCCCTAATTCAGTTTTTAGGTAGCTCTATCAGTTTGCTGTCAACCATTGGGCATTGGTTTTTTTCTTCTTCCAAATAGTCGTTAAAATGTTAGAAGGACTTGGATTTGATAACTCATTTCTCAATCATAATAGAGAAGAATATAAGAGGTGAACTTCCTATGAGAGTCTTTGGCCATAGATGTCATCTAGGCCAATTGAAGTGAGATACAGGAAATATAAGCCTATATTTAGTGTCACTTCATCTTTTTTGTCCTAACTAAATAGTTTTGTGTACTCCATACCTCAAGAAGTTATTTCAATGTAGGCACCTTTTTGGTTGCTTGGTTTGAAAGATTATCTTGCTCATATATTAACTGGCTAGAACTATGCCATTTCTCTCTTCTTTGTAACTAATGAATATTAGCAGGTGAAATTGCTCTGTTGGCTGATGTCTGTTCTTTTCTCAGGTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGAGAAGAACGTTTGGCTCAGGTATTGTTTGAAGCTCATTAAAATTTCTAGGGAAAAGTTGGCTCTGACACTTGATGGAGTGCTCTACTCTACTCCATGTTTTATGGTTTTAAGAAACGTTTCATGCAATTATGGGATTTTATGTCCTTTTAAATAACTGCATAGGATTTTTTCTCATCTTTTCTGTTTCAAATTTCAGGGACCAGGAGGAGAGAAGCC</genome_strand>
        <mrna_strand>AAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGAGAAGAACGTTTGGCTCAA..................................................................................................................................................................................GGACCAGGAGGAGAGAAGCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E573100" ref_strand="+" ref_description="SGN-E573100 [32358]">
      <seq>acaaaatcgaaaatggtttcgttgaagctccagaagcggctctgccgctagtgtcctcaagtgtggaagaggaaaagtttggcttgatcctaatgaagggaatgaaatctccatggccaattcccgtcaaaacatcaggaaattggttaagtgatggtttcatcatcaggaaaccaaccaaaattcactcaagatctcgtgctcgcagaatgaaggattgccaaagaggaaaggccgtcactctggatatggtaagcgcaaagtgtaccagggaggctagactgcctaccaaggtgctttggatgaggagattgagagtcctcaggcgtttgcttcgcaagtatagggaatcaaatgaagattgacgaaacacatgtatcatgacatgtacatgaaggtgaagggtaatgttttcaagaacaagcgtgtgctgatggaagatatccacaagacaaaggctgagaaagctagagcagaagaccttgtccgagccaatttgaggctaggagggcaaagaacaatgcaagcagagaaagaaagtttgccaaggagggaagaacgtttcggctcagggaccaggaggagagaagc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="65252" stop="62246"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64952" g_stop="64829" g_length="124"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="125" r_length="125" r_score="0.968"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64828" i_stop="63671" i_length="1158">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.955" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63670" g_stop="63548" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="126" r_stop="251" r_length="126" r_score="0.927"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63547" i_stop="63057" i_length="491">
            <donor d_prob="0.909" d_score="0.88"/>
            <acceptor a_prob="0.975" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="63056" g_stop="62743" g_length="314"/>
          <reference_exon_boundary r_type="cDNA" r_start="252" r_stop="572" r_length="321" r_score="0.939"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="62742" i_stop="62565" i_length="178">
            <donor d_prob="0.513" d_score="0.90"/>
            <acceptor a_prob="1.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="62564" g_stop="62546" g_length="19"/>
          <reference_exon_boundary r_type="cDNA" r_start="573" r_stop="591" r_length="19" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E573100" ref_strand="+">
        <total_alignment_score>0.943</total_alignment_score>
        <cumulative_length_of_scored_exons>580</cumulative_length_of_scored_exons>
        <coverage percentage="0.981" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E573100" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64952" e_stop="64829"/>
          <exon e_start="63670" e_stop="63548"/>
          <exon e_start="63056" e_stop="62743"/>
          <exon e_start="62564" e_stop="62546"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACAAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTC-GCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCCGTATGTTTCTGTTTTCTGTTTGTTATCAATATCTATTTACGTTTATGCTATCTCTTTTAATCTCTTGTTTGTATGTTATGGCTTCTGATTGTGAAAGATCTATAGTAGGTTTTGATCAGTTTAGCTCCAACGATGCTTAGGTTATGTTACTTTATCGTTTCGCCGTCTTTTCTTGTGTGGAGTGTTTAATTTTGGAATTTGATCAACCGTAGTGTTGTTTTAACCACATATACTCTGATGTCGACCAGTTCAGATCCATAGAAGCATTGATTATTTGTGTTGAGGTTTTAGGTTTGGATTTTGATCAAACATTACAATGTTTCAACTGAATATACTGTTGAGGTATATTTTTGTCGTAGAGTTTGATCAGTTAAGCTCCAGTGTACCATAGATTAATTTACTGTTACTATCAATTTGCCTTTTGTTAGAGTTGCTGTTTTGAATTTGATCAGTATACTCCTTATGCATTGTTCACAAGATTAGCAGCATACTAATGTTTTTTTATTTATGTCTACTGTGTCAGCTTAGAGTGATATTTTTTAGGTTTTTGCATTGAAAACATATTTGTTTTTGGTAAACATGATTAACAAGGATGGTTGTTCTAGTGTTAAATGGATGCGAATAAACAATTATGCTGATTTTTTGGAAAACTGAAGATGTAGTGGATTGAAATTATTGGCAGATGTGGATAGGTTATGTGACAAGTTATATTTGCTGAAGTTTTTGAGTCGTGAGATTGAAATGTAATTGAGCTGTATATGTTCATTACAACACTGTCATTGTAATTTAATCAGTAATGATGATAGGTTACTAAACAGTGGGATGAATTAACTGCAATTATCTTTGTTATTGGTAGATGTCAATATGGAAAGATACCTATTTTGTGGGATTTCATTGGGTATGTTGTTGTATTGGCAGATATTTATTTGGTGTTGCTGCTTTGCGTTATTTGCCTCTTAATCTGATGTTTAGATGACAAAGTGATATTAATGTTTACTCAATCTAGATAACTAGAACATGTTTGCTGGAACAAGCTTATTGGTTGAGCTTGTGCAAGCCAGTTGCAATCCTTGTAGCTCTCCCTATGTCATTGTGCCAACTATTTTTTGTCATATTTCTATGAACTGCCCGTAATCCCTTCCTTTCCACTTAATACAGGTCAAAACATCAGGAAATTGGTTAAG-GATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGA-GGCC-AAGAGGAAAGGCCGTCACTCTGGATATGGTACATCCTTGTCTTGACTGTGATTGCAGAAACTCATTTTTCATGCCCTAATTCAGTTTTTAGGTAGCTCTATCAGTTTGCTGTCAACCATTGGGCATTGGTTTTTTTCTTCTTCCAAATAGTCGTTAAAATGTTAGAAGGACTTGGATTTGATAACTCATTTCTCAATCATAATAGAGAAGAATATAAGAGGTGAACTTCCTATGAGAGTCTTTGGCCATAGATGTCATCTAGGCCAATTGAAGTGAGATACAGGAAATATAAGCCTATATTTAGTGTCACTTCATCTTTTTTGTCCTAACTAAATAGTTTTGTGTACTCCATACCTCAAGAAGTTATTTCAATGTAGGCACCTTTTTGGTTGCTTGGTTTGAAAGATTATCTTGCTCATATATTAACTGGCTAGAACTATGCCATTTCTCTCTTCTTTGTAACTAATGAATATTAGCAGGTGAAATTGCTCTGTTGGCTGATGTCTGTTCTTTTCTCAGGTAAGCGCAAAG-GTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAA-GAAGATTGAC-AAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAG-AGAAAACCTTGTCCGA-CCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTG-CAAGGAGAGAAGAACGTTT-GGCTCAGGTATTGTTTGAAGCTCATTAAAATTTCTAGGGAAAAGTTGGCTCTGACACTTGATGGAGTGCTCTACTCTACTCCATGTTTTATGGTTTTAAGAAACGTTTCATGCAATTATGGGATTTTATGTCCTTTTAAATAACTGCATAGGATTTTTTCTCATCTTTTCTGTTTCAAATTTCAGGGACCAGGAGGAGAGAAGC</genome_strand>
        <mrna_strand>ACAAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCTGCCGCTAGTGTCCTCAAGTGTGGAAGAGGAAAAGTTTGGCTTGATCCTAATGAAGGGAATGAAATCTCCATGGCCAATTCCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAAAACATCAGGAAATTGGTTAAGTGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCAAGATCTCGTGCTCGCAGAATGAAGGATTGCCAAAGAGGAAAGGCCGTCACTCTGGATATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGCGCAAAGTGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAATGAAGATTGACGAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAGATATCCACAAGACAAAGGCTGAGAAAGCTAGAGCAGAAGACCTTGTCCGAGCCAATTTGAGGCTAGGAGGGCAAAGAACAATGCAAGCAGAGAAAGAAAGTTTGCCAAGGAGGGAAGAACGTTTCGGCTCAG..................................................................................................................................................................................GGACCAGGAGGAGAGAAGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E615216" ref_strand="+" ref_description="SGN-E615216 [65012]">
      <seq>ggaggctagactgcctaccaaggtgctttggatgaggagattgagagtcctcaggcgtttgcttcgcaagtatagggaatcaaagaagattgacaaacacatgtatcatgacatgtacatgaaggtgaagggtaatgttttcaagaacaagcgtgtgctgatggaaaatatccacaagacaaaggctgagaaggctagagagaagaaccttgtccgaccaatttgaggctaggaggggcaagaacaagggcaaagc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="63337" stop="62485"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="63037" g_stop="62791" g_length="247"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="248" r_length="248" r_score="0.984"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="62790" i_stop="62565" i_length="226">
            <donor d_prob="0.420" d_score="0.92"/>
            <acceptor a_prob="1.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="62564" g_stop="62557" g_length="8"/>
          <reference_exon_boundary r_type="cDNA" r_start="249" r_stop="256" r_length="8" r_score="0.500"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E615216" ref_strand="+">
        <total_alignment_score>0.984</total_alignment_score>
        <cumulative_length_of_scored_exons>255</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E615216" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="63037" e_stop="62791"/>
          <exon e_start="62564" e_stop="62557"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAA-AACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGAGAAGAACGTTTGGCTCAGGTATTGTTTGAAGCTCATTAAAATTTCTAGGGAAAAGTTGGCTCTGACACTTGATGGAGTGCTCTACTCTACTCCATGTTTTATGGTTTTAAGAAACGTTTCATGCAATTATGGGATTTTATGTCCTTTTAAATAACTGCATAGGATTTTTTCTCATCTTTTCTGTTTCAAATTTCAGGGACCAGG</genome_strand>
        <mrna_strand>GGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAGAACCTTGTCCGACCAATTTGAGGCTAGGAGGGGCAAGAACAAG..................................................................................................................................................................................................................................GGCAAAGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E202989" ref_strand="+" ref_description="SGN-E202989 [cLEB-1-O14]">
      <seq>gcacgagcaaaatcgaaaatggtttcgttgaagctccagaagcggctcgccgctagtgtcctcaagtgtggaagaggcaaagtttggcttgatcctaatgaaggcaatgaaatctccatggccaattcccgtcaaaacatcaggaaattggttaaggatggtttcatcatcaggaaaccaaccaaaattcactcgagatctcgtgctcgccgaatgaaggaggccaagaggaaaggccgtcactctggatatggtaagcgcaaaggtaccagggaggctagactgcctaccaaggtgctttggatgaggagattgagagtcctcaggcgtttgcttcgcaagtatagggaatcaaagaagattgacaaacacatgtatcatgacatgtacatgaaggtgaagggtaatgttttcaagaacaagcgtgtgctgatggaaaatatccacaagacaaaggctgagaaggctagagagaaaaccttgtccgaccaatttgaggctaggagggcaaagaacaaggcaagcagagaaagaaagtttgcaaggagagaagaacgtttggctca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="65251" stop="62444"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64960" g_stop="64829" g_length="132"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="130" r_length="130" r_score="0.962"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64828" i_stop="63671" i_length="1158">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.955" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63670" g_stop="63548" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="131" r_stop="253" r_length="123" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63547" i_stop="63057" i_length="491">
            <donor d_prob="0.909" d_score="1.00"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="63056" g_stop="62744" g_length="313"/>
          <reference_exon_boundary r_type="cDNA" r_start="254" r_stop="566" r_length="313" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E202989" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>568</cumulative_length_of_scored_exons>
        <coverage percentage="1.004" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E202989" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64960" e_stop="64829"/>
          <exon e_start="63670" e_stop="63548"/>
          <exon e_start="63056" e_stop="62744"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAGCTTCACAAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCCGTATGTTTCTGTTTTCTGTTTGTTATCAATATCTATTTACGTTTATGCTATCTCTTTTAATCTCTTGTTTGTATGTTATGGCTTCTGATTGTGAAAGATCTATAGTAGGTTTTGATCAGTTTAGCTCCAACGATGCTTAGGTTATGTTACTTTATCGTTTCGCCGTCTTTTCTTGTGTGGAGTGTTTAATTTTGGAATTTGATCAACCGTAGTGTTGTTTTAACCACATATACTCTGATGTCGACCAGTTCAGATCCATAGAAGCATTGATTATTTGTGTTGAGGTTTTAGGTTTGGATTTTGATCAAACATTACAATGTTTCAACTGAATATACTGTTGAGGTATATTTTTGTCGTAGAGTTTGATCAGTTAAGCTCCAGTGTACCATAGATTAATTTACTGTTACTATCAATTTGCCTTTTGTTAGAGTTGCTGTTTTGAATTTGATCAGTATACTCCTTATGCATTGTTCACAAGATTAGCAGCATACTAATGTTTTTTTATTTATGTCTACTGTGTCAGCTTAGAGTGATATTTTTTAGGTTTTTGCATTGAAAACATATTTGTTTTTGGTAAACATGATTAACAAGGATGGTTGTTCTAGTGTTAAATGGATGCGAATAAACAATTATGCTGATTTTTTGGAAAACTGAAGATGTAGTGGATTGAAATTATTGGCAGATGTGGATAGGTTATGTGACAAGTTATATTTGCTGAAGTTTTTGAGTCGTGAGATTGAAATGTAATTGAGCTGTATATGTTCATTACAACACTGTCATTGTAATTTAATCAGTAATGATGATAGGTTACTAAACAGTGGGATGAATTAACTGCAATTATCTTTGTTATTGGTAGATGTCAATATGGAAAGATACCTATTTTGTGGGATTTCATTGGGTATGTTGTTGTATTGGCAGATATTTATTTGGTGTTGCTGCTTTGCGTTATTTGCCTCTTAATCTGATGTTTAGATGACAAAGTGATATTAATGTTTACTCAATCTAGATAACTAGAACATGTTTGCTGGAACAAGCTTATTGGTTGAGCTTGTGCAAGCCAGTTGCAATCCTTGTAGCTCTCCCTATGTCATTGTGCCAACTATTTTTTGTCATATTTCTATGAACTGCCCGTAATCCCTTCCTTTCCACTTAATACAGGTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATGGTACATCCTTGTCTTGACTGTGATTGCAGAAACTCATTTTTCATGCCCTAATTCAGTTTTTAGGTAGCTCTATCAGTTTGCTGTCAACCATTGGGCATTGGTTTTTTTCTTCTTCCAAATAGTCGTTAAAATGTTAGAAGGACTTGGATTTGATAACTCATTTCTCAATCATAATAGAGAAGAATATAAGAGGTGAACTTCCTATGAGAGTCTTTGGCCATAGATGTCATCTAGGCCAATTGAAGTGAGATACAGGAAATATAAGCCTATATTTAGTGTCACTTCATCTTTTTTGTCCTAACTAAATAGTTTTGTGTACTCCATACCTCAAGAAGTTATTTCAATGTAGGCACCTTTTTGGTTGCTTGGTTTGAAAGATTATCTTGCTCATATATTAACTGGCTAGAACTATGCCATTTCTCTCTTCTTTGTAACTAATGAATATTAGCAGGTGAAATTGCTCTGTTGGCTGATGTCTGTTCTTTTCTCAGGTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGAGAAGAACGTTTGGCTCA</genome_strand>
        <mrna_strand>GCA-C-GAGCAAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGAGAAGAACGTTTGGCTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E558630" ref_strand="+" ref_description="SGN-E558630 [18000]">
      <seq>caaaatcgaaaatggtttcgttgaagctccagaagcggctcgccgctagtgtcctcaagtgtggaagaggaaaagtttggcttgatcctaatgaagggaatgaaatctccatggccaattcccgtcaaaacatcaggaaattggttaaggatggtttcatcatcaggaaaccaaccaaaattcactcaagatctcgtgctcgcagaatgaaggaggccaagaggaaaggccgtcactctggatatggtaagcgcaaaggtaccagggaggctagactgcctaccaaggtgctttggatgaggagattgagagtcctcaggcgtttgcttcgcaagtatagggaatcaaagaagattgacaaacacatgtatcatgacatgtacatgaaggtgaagggtaatgttttcaagaacaagcgtgtgctgatggaaaatatccacaagacaaaggctgagaaggctagagagaagaccttgtccgaccaatttgaggctaggagggcaaagaacaaggcaagcagagaaagaaagtttgcaaggagggaagaacgtttggctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="65251" stop="62445"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64951" g_stop="64829" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="123" r_length="123" r_score="0.984"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64828" i_stop="63671" i_length="1158">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.955" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63670" g_stop="63548" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="124" r_stop="246" r_length="123" r_score="0.984"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63547" i_stop="63057" i_length="491">
            <donor d_prob="0.909" d_score="0.98"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="63056" g_stop="62745" g_length="312"/>
          <reference_exon_boundary r_type="cDNA" r_start="247" r_stop="558" r_length="312" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E558630" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>558</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E558630" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64951" e_stop="64829"/>
          <exon e_start="63670" e_stop="63548"/>
          <exon e_start="63056" e_stop="62745"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCCGTATGTTTCTGTTTTCTGTTTGTTATCAATATCTATTTACGTTTATGCTATCTCTTTTAATCTCTTGTTTGTATGTTATGGCTTCTGATTGTGAAAGATCTATAGTAGGTTTTGATCAGTTTAGCTCCAACGATGCTTAGGTTATGTTACTTTATCGTTTCGCCGTCTTTTCTTGTGTGGAGTGTTTAATTTTGGAATTTGATCAACCGTAGTGTTGTTTTAACCACATATACTCTGATGTCGACCAGTTCAGATCCATAGAAGCATTGATTATTTGTGTTGAGGTTTTAGGTTTGGATTTTGATCAAACATTACAATGTTTCAACTGAATATACTGTTGAGGTATATTTTTGTCGTAGAGTTTGATCAGTTAAGCTCCAGTGTACCATAGATTAATTTACTGTTACTATCAATTTGCCTTTTGTTAGAGTTGCTGTTTTGAATTTGATCAGTATACTCCTTATGCATTGTTCACAAGATTAGCAGCATACTAATGTTTTTTTATTTATGTCTACTGTGTCAGCTTAGAGTGATATTTTTTAGGTTTTTGCATTGAAAACATATTTGTTTTTGGTAAACATGATTAACAAGGATGGTTGTTCTAGTGTTAAATGGATGCGAATAAACAATTATGCTGATTTTTTGGAAAACTGAAGATGTAGTGGATTGAAATTATTGGCAGATGTGGATAGGTTATGTGACAAGTTATATTTGCTGAAGTTTTTGAGTCGTGAGATTGAAATGTAATTGAGCTGTATATGTTCATTACAACACTGTCATTGTAATTTAATCAGTAATGATGATAGGTTACTAAACAGTGGGATGAATTAACTGCAATTATCTTTGTTATTGGTAGATGTCAATATGGAAAGATACCTATTTTGTGGGATTTCATTGGGTATGTTGTTGTATTGGCAGATATTTATTTGGTGTTGCTGCTTTGCGTTATTTGCCTCTTAATCTGATGTTTAGATGACAAAGTGATATTAATGTTTACTCAATCTAGATAACTAGAACATGTTTGCTGGAACAAGCTTATTGGTTGAGCTTGTGCAAGCCAGTTGCAATCCTTGTAGCTCTCCCTATGTCATTGTGCCAACTATTTTTTGTCATATTTCTATGAACTGCCCGTAATCCCTTCCTTTCCACTTAATACAGGTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATGGTACATCCTTGTCTTGACTGTGATTGCAGAAACTCATTTTTCATGCCCTAATTCAGTTTTTAGGTAGCTCTATCAGTTTGCTGTCAACCATTGGGCATTGGTTTTTTTCTTCTTCCAAATAGTCGTTAAAATGTTAGAAGGACTTGGATTTGATAACTCATTTCTCAATCATAATAGAGAAGAATATAAGAGGTGAACTTCCTATGAGAGTCTTTGGCCATAGATGTCATCTAGGCCAATTGAAGTGAGATACAGGAAATATAAGCCTATATTTAGTGTCACTTCATCTTTTTTGTCCTAACTAAATAGTTTTGTGTACTCCATACCTCAAGAAGTTATTTCAATGTAGGCACCTTTTTGGTTGCTTGGTTTGAAAGATTATCTTGCTCATATATTAACTGGCTAGAACTATGCCATTTCTCTCTTCTTTGTAACTAATGAATATTAGCAGGTGAAATTGCTCTGTTGGCTGATGTCTGTTCTTTTCTCAGGTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGAGAAGAACGTTTGGCTC</genome_strand>
        <mrna_strand>CAAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGAAAAGTTTGGCTTGATCCTAATGAAGGGAATGAAATCTCCATGGCCAATTCCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCAAGATCTCGTGCTCGCAGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAGACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGGGAAGAACGTTTGGCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E295253" ref_strand="+" ref_description="SGN-E295253 [cLET-20-M12]">
      <seq>caaaatcgaaaatggtttcgttgaagctccagaagcggctcgccgctagtgtcctcaagtgtggaagaggcaaagtttggcttgatcctaatgaaggcaatgaaatctccatggccaattcccgtcaaaacatcaggaaattggttaaggatggtttcatcatcaggaaaccaaccaaaattcactcgagatctcgtgctcgccgaatgaaggaggccaagaggaaaggccgtcactctggatatggtaagcgcaaaggtaccagggaggctagactgcctaccaaggtgctttggatgaggagattgagagtcctcaggcgtttgcttcgcaagtatagggaatcaaagaagattgacaaacacatgtatcatgacatgtacatgaaggtgaagggtaatgttttcaagaacaagcgtgtgctgatggaaaatatccacaagacaaaggctgagaaggctagagagaaaaccttgtccgaccaatttgaggctaggagggcaaagaacaaggcaagcagagaaagaaagtttgcaaggagagaagaacgtttggctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="65251" stop="62445"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64951" g_stop="64829" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="123" r_length="123" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64828" i_stop="63671" i_length="1158">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.955" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63670" g_stop="63548" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="124" r_stop="246" r_length="123" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63547" i_stop="63057" i_length="491">
            <donor d_prob="0.909" d_score="1.00"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="63056" g_stop="62745" g_length="312"/>
          <reference_exon_boundary r_type="cDNA" r_start="247" r_stop="558" r_length="312" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E295253" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>558</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E295253" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64951" e_stop="64829"/>
          <exon e_start="63670" e_stop="63548"/>
          <exon e_start="63056" e_stop="62745"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCCGTATGTTTCTGTTTTCTGTTTGTTATCAATATCTATTTACGTTTATGCTATCTCTTTTAATCTCTTGTTTGTATGTTATGGCTTCTGATTGTGAAAGATCTATAGTAGGTTTTGATCAGTTTAGCTCCAACGATGCTTAGGTTATGTTACTTTATCGTTTCGCCGTCTTTTCTTGTGTGGAGTGTTTAATTTTGGAATTTGATCAACCGTAGTGTTGTTTTAACCACATATACTCTGATGTCGACCAGTTCAGATCCATAGAAGCATTGATTATTTGTGTTGAGGTTTTAGGTTTGGATTTTGATCAAACATTACAATGTTTCAACTGAATATACTGTTGAGGTATATTTTTGTCGTAGAGTTTGATCAGTTAAGCTCCAGTGTACCATAGATTAATTTACTGTTACTATCAATTTGCCTTTTGTTAGAGTTGCTGTTTTGAATTTGATCAGTATACTCCTTATGCATTGTTCACAAGATTAGCAGCATACTAATGTTTTTTTATTTATGTCTACTGTGTCAGCTTAGAGTGATATTTTTTAGGTTTTTGCATTGAAAACATATTTGTTTTTGGTAAACATGATTAACAAGGATGGTTGTTCTAGTGTTAAATGGATGCGAATAAACAATTATGCTGATTTTTTGGAAAACTGAAGATGTAGTGGATTGAAATTATTGGCAGATGTGGATAGGTTATGTGACAAGTTATATTTGCTGAAGTTTTTGAGTCGTGAGATTGAAATGTAATTGAGCTGTATATGTTCATTACAACACTGTCATTGTAATTTAATCAGTAATGATGATAGGTTACTAAACAGTGGGATGAATTAACTGCAATTATCTTTGTTATTGGTAGATGTCAATATGGAAAGATACCTATTTTGTGGGATTTCATTGGGTATGTTGTTGTATTGGCAGATATTTATTTGGTGTTGCTGCTTTGCGTTATTTGCCTCTTAATCTGATGTTTAGATGACAAAGTGATATTAATGTTTACTCAATCTAGATAACTAGAACATGTTTGCTGGAACAAGCTTATTGGTTGAGCTTGTGCAAGCCAGTTGCAATCCTTGTAGCTCTCCCTATGTCATTGTGCCAACTATTTTTTGTCATATTTCTATGAACTGCCCGTAATCCCTTCCTTTCCACTTAATACAGGTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATGGTACATCCTTGTCTTGACTGTGATTGCAGAAACTCATTTTTCATGCCCTAATTCAGTTTTTAGGTAGCTCTATCAGTTTGCTGTCAACCATTGGGCATTGGTTTTTTTCTTCTTCCAAATAGTCGTTAAAATGTTAGAAGGACTTGGATTTGATAACTCATTTCTCAATCATAATAGAGAAGAATATAAGAGGTGAACTTCCTATGAGAGTCTTTGGCCATAGATGTCATCTAGGCCAATTGAAGTGAGATACAGGAAATATAAGCCTATATTTAGTGTCACTTCATCTTTTTTGTCCTAACTAAATAGTTTTGTGTACTCCATACCTCAAGAAGTTATTTCAATGTAGGCACCTTTTTGGTTGCTTGGTTTGAAAGATTATCTTGCTCATATATTAACTGGCTAGAACTATGCCATTTCTCTCTTCTTTGTAACTAATGAATATTAGCAGGTGAAATTGCTCTGTTGGCTGATGTCTGTTCTTTTCTCAGGTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGAGAAGAACGTTTGGCTC</genome_strand>
        <mrna_strand>CAAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGAGAAGAACGTTTGGCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E561762" ref_strand="+" ref_description="SGN-E561762 [18966]">
      <seq>ttgaagctccaaagcggctcgccgctagtgtcgctcaagtgtggaagaggaaaagtttggcttgatcctaatgaagggaatgaaatctccatgggccaattcccgtcaaaacatcaggaaattggttaaggatggtttcatcatcaggaaaccaaccaaaattcactcaagatctcgtgctcgcagaatgaagaggccaagaggaaaggccgtcactctggatatggtaagcgcaaaggtaccagggaggctagactgcctaccaaggtgctttggatgaggagattgagagtcctcaggcgtttgcttcgcaagtatagggaatcaaagaagattgacaaacacatgtatcatgacatgtacatgaaggtgaagggtaatgttttcaagaacaagcgtgtgctgatggaaaatatccacaagacaaaggctgagaaggctaagagaagaccttgtccgaccaatttgagggctaggagtggcaaagaacaaggcaagcagagaaagaaaggtttgcaaggagggaagaacgtttggctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="65231" stop="62445"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64931" g_stop="64829" g_length="103"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="104" r_length="104" r_score="0.932"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64828" i_stop="63671" i_length="1158">
            <donor d_prob="0.998" d_score="0.94"/>
            <acceptor a_prob="0.955" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63670" g_stop="63548" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="105" r_stop="226" r_length="122" r_score="0.976"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63547" i_stop="63057" i_length="491">
            <donor d_prob="0.909" d_score="0.96"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="63056" g_stop="62745" g_length="312"/>
          <reference_exon_boundary r_type="cDNA" r_start="227" r_stop="540" r_length="314" r_score="0.971"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E561762" ref_strand="+">
        <total_alignment_score>0.965</total_alignment_score>
        <cumulative_length_of_scored_exons>538</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E561762" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64931" e_stop="64829"/>
          <exon e_start="63670" e_stop="63548"/>
          <exon e_start="63056" e_stop="62745"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTC-CTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCAT-GGCCAATTCCCGTATGTTTCTGTTTTCTGTTTGTTATCAATATCTATTTACGTTTATGCTATCTCTTTTAATCTCTTGTTTGTATGTTATGGCTTCTGATTGTGAAAGATCTATAGTAGGTTTTGATCAGTTTAGCTCCAACGATGCTTAGGTTATGTTACTTTATCGTTTCGCCGTCTTTTCTTGTGTGGAGTGTTTAATTTTGGAATTTGATCAACCGTAGTGTTGTTTTAACCACATATACTCTGATGTCGACCAGTTCAGATCCATAGAAGCATTGATTATTTGTGTTGAGGTTTTAGGTTTGGATTTTGATCAAACATTACAATGTTTCAACTGAATATACTGTTGAGGTATATTTTTGTCGTAGAGTTTGATCAGTTAAGCTCCAGTGTACCATAGATTAATTTACTGTTACTATCAATTTGCCTTTTGTTAGAGTTGCTGTTTTGAATTTGATCAGTATACTCCTTATGCATTGTTCACAAGATTAGCAGCATACTAATGTTTTTTTATTTATGTCTACTGTGTCAGCTTAGAGTGATATTTTTTAGGTTTTTGCATTGAAAACATATTTGTTTTTGGTAAACATGATTAACAAGGATGGTTGTTCTAGTGTTAAATGGATGCGAATAAACAATTATGCTGATTTTTTGGAAAACTGAAGATGTAGTGGATTGAAATTATTGGCAGATGTGGATAGGTTATGTGACAAGTTATATTTGCTGAAGTTTTTGAGTCGTGAGATTGAAATGTAATTGAGCTGTATATGTTCATTACAACACTGTCATTGTAATTTAATCAGTAATGATGATAGGTTACTAAACAGTGGGATGAATTAACTGCAATTATCTTTGTTATTGGTAGATGTCAATATGGAAAGATACCTATTTTGTGGGATTTCATTGGGTATGTTGTTGTATTGGCAGATATTTATTTGGTGTTGCTGCTTTGCGTTATTTGCCTCTTAATCTGATGTTTAGATGACAAAGTGATATTAATGTTTACTCAATCTAGATAACTAGAACATGTTTGCTGGAACAAGCTTATTGGTTGAGCTTGTGCAAGCCAGTTGCAATCCTTGTAGCTCTCCCTATGTCATTGTGCCAACTATTTTTTGTCATATTTCTATGAACTGCCCGTAATCCCTTCCTTTCCACTTAATACAGGTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATGGTACATCCTTGTCTTGACTGTGATTGCAGAAACTCATTTTTCATGCCCTAATTCAGTTTTTAGGTAGCTCTATCAGTTTGCTGTCAACCATTGGGCATTGGTTTTTTTCTTCTTCCAAATAGTCGTTAAAATGTTAGAAGGACTTGGATTTGATAACTCATTTCTCAATCATAATAGAGAAGAATATAAGAGGTGAACTTCCTATGAGAGTCTTTGGCCATAGATGTCATCTAGGCCAATTGAAGTGAGATACAGGAAATATAAGCCTATATTTAGTGTCACTTCATCTTTTTTGTCCTAACTAAATAGTTTTGTGTACTCCATACCTCAAGAAGTTATTTCAATGTAGGCACCTTTTTGGTTGCTTGGTTTGAAAGATTATCTTGCTCATATATTAACTGGCTAGAACTATGCCATTTCTCTCTTCTTTGTAACTAATGAATATTAGCAGGTGAAATTGCTCTGTTGGCTGATGTCTGTTCTTTTCTCAGGTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGA-GGCTAGGAG-GGCAAAGAACAAGGCAAGCAGAGAAAGAAA-GTTTGCAAGGAGAGAAGAACGTTTGGCTC</genome_strand>
        <mrna_strand>TTGAAGCTCCA-AAGCGGCTCGCCGCTAGTGTCGCTCAAGTGTGGAAGAGGAAAAGTTTGGCTTGATCCTAATGAAGGGAATGAAATCTCCATGGGCCAATTCCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCAAGATCTCGTGCTCGCAGAATGAA-GAGGCCAAGAGGAAAGGCCGTCACTCTGGATATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTA-AGAGAAGACCTTGTCCGACCAATTTGAGGGCTAGGAGTGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGGTTTGCAAGGAGGGAAGAACGTTTGGCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E287820" ref_strand="+" ref_description="SGN-E287820 [cLES-19-J11]">
      <seq>gccgctagtgtcctcaagtgtggaagaggcaaagtttggcttgatcctaatgaaggcaatgaaatctccatggccaattcccgtcaaaacatcaggaaattggttaaggatggtttcatcatcaggaaaccaaccaaaattcactcgagatctcgtgctcgccgaatgaaggaggccaagaggaaaggccgtcactctggatatggtaagcgcaaaggtaccagggaggctagactgcctaccaaggtgctttggatgaggagattgagagtcctcaggcgtttgcttcgcaagtatagggaatcaaagaagattgacaaacacatgtatcatgacatgtacatgaaggtgaagggtaatgttttcaagaacaagcgtgtgctgatggaaaatatccacaagacaaaggctgagaaggctagagagaaaaccttgtccgaccaatttgaggctaggagggcaaagaacaaggcaagcagagaaagaaagtttgcaaggagagaagaacgtttggctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="65210" stop="62445"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64910" g_stop="64829" g_length="82"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="82" r_length="82" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64828" i_stop="63671" i_length="1158">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.955" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63670" g_stop="63548" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="83" r_stop="205" r_length="123" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63547" i_stop="63057" i_length="491">
            <donor d_prob="0.909" d_score="1.00"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="63056" g_stop="62745" g_length="312"/>
          <reference_exon_boundary r_type="cDNA" r_start="206" r_stop="517" r_length="312" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E287820" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>517</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E287820" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64910" e_stop="64829"/>
          <exon e_start="63670" e_stop="63548"/>
          <exon e_start="63056" e_stop="62745"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCCGTATGTTTCTGTTTTCTGTTTGTTATCAATATCTATTTACGTTTATGCTATCTCTTTTAATCTCTTGTTTGTATGTTATGGCTTCTGATTGTGAAAGATCTATAGTAGGTTTTGATCAGTTTAGCTCCAACGATGCTTAGGTTATGTTACTTTATCGTTTCGCCGTCTTTTCTTGTGTGGAGTGTTTAATTTTGGAATTTGATCAACCGTAGTGTTGTTTTAACCACATATACTCTGATGTCGACCAGTTCAGATCCATAGAAGCATTGATTATTTGTGTTGAGGTTTTAGGTTTGGATTTTGATCAAACATTACAATGTTTCAACTGAATATACTGTTGAGGTATATTTTTGTCGTAGAGTTTGATCAGTTAAGCTCCAGTGTACCATAGATTAATTTACTGTTACTATCAATTTGCCTTTTGTTAGAGTTGCTGTTTTGAATTTGATCAGTATACTCCTTATGCATTGTTCACAAGATTAGCAGCATACTAATGTTTTTTTATTTATGTCTACTGTGTCAGCTTAGAGTGATATTTTTTAGGTTTTTGCATTGAAAACATATTTGTTTTTGGTAAACATGATTAACAAGGATGGTTGTTCTAGTGTTAAATGGATGCGAATAAACAATTATGCTGATTTTTTGGAAAACTGAAGATGTAGTGGATTGAAATTATTGGCAGATGTGGATAGGTTATGTGACAAGTTATATTTGCTGAAGTTTTTGAGTCGTGAGATTGAAATGTAATTGAGCTGTATATGTTCATTACAACACTGTCATTGTAATTTAATCAGTAATGATGATAGGTTACTAAACAGTGGGATGAATTAACTGCAATTATCTTTGTTATTGGTAGATGTCAATATGGAAAGATACCTATTTTGTGGGATTTCATTGGGTATGTTGTTGTATTGGCAGATATTTATTTGGTGTTGCTGCTTTGCGTTATTTGCCTCTTAATCTGATGTTTAGATGACAAAGTGATATTAATGTTTACTCAATCTAGATAACTAGAACATGTTTGCTGGAACAAGCTTATTGGTTGAGCTTGTGCAAGCCAGTTGCAATCCTTGTAGCTCTCCCTATGTCATTGTGCCAACTATTTTTTGTCATATTTCTATGAACTGCCCGTAATCCCTTCCTTTCCACTTAATACAGGTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATGGTACATCCTTGTCTTGACTGTGATTGCAGAAACTCATTTTTCATGCCCTAATTCAGTTTTTAGGTAGCTCTATCAGTTTGCTGTCAACCATTGGGCATTGGTTTTTTTCTTCTTCCAAATAGTCGTTAAAATGTTAGAAGGACTTGGATTTGATAACTCATTTCTCAATCATAATAGAGAAGAATATAAGAGGTGAACTTCCTATGAGAGTCTTTGGCCATAGATGTCATCTAGGCCAATTGAAGTGAGATACAGGAAATATAAGCCTATATTTAGTGTCACTTCATCTTTTTTGTCCTAACTAAATAGTTTTGTGTACTCCATACCTCAAGAAGTTATTTCAATGTAGGCACCTTTTTGGTTGCTTGGTTTGAAAGATTATCTTGCTCATATATTAACTGGCTAGAACTATGCCATTTCTCTCTTCTTTGTAACTAATGAATATTAGCAGGTGAAATTGCTCTGTTGGCTGATGTCTGTTCTTTTCTCAGGTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGAGAAGAACGTTTGGCTC</genome_strand>
        <mrna_strand>GCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGAGAAGAACGTTTGGCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E323499" ref_strand="+" ref_description="SGN-E323499 [cTOC-7-A18]">
      <seq>tttggcttgatcctaatgaaggcaatgaaatctccatgggcaattcccgtcaaaacatcaggaaattggttaaggatggtttcatcatcaggaaaccaaccaaaattcactcgagatctcgtgctcgccgaatgaaggaggccaagaggaaaggccgtcactctggatatggtaagcgcaaaggtaccagggaggctagactgcctaccaaggtgctttggatgaggagattgagagtcctcaggcgtttgcttcgcaagtatagggaatcaaagaagattgacaaacacatgtatcatgacatgtacatgaaggtgaagggtaatgttttcaagaacaagcgtgtgctgatggaaaatatccacaagacaaaggctgagaaggctagagagaaaaccttgtccgaccaatttgaggctaggagggcaaagaacaaggcaagcagagaaagaaagtttgcaaggagagaagaacgtttggctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="65176" stop="62445"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64876" g_stop="64829" g_length="48"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="48" r_length="48" r_score="0.979"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64828" i_stop="63671" i_length="1158">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.955" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63670" g_stop="63548" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="49" r_stop="171" r_length="123" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63547" i_stop="63057" i_length="491">
            <donor d_prob="0.909" d_score="1.00"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="63056" g_stop="62745" g_length="312"/>
          <reference_exon_boundary r_type="cDNA" r_start="172" r_stop="483" r_length="312" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E323499" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>483</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E323499" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64876" e_stop="64829"/>
          <exon e_start="63670" e_stop="63548"/>
          <exon e_start="63056" e_stop="62745"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCCGTATGTTTCTGTTTTCTGTTTGTTATCAATATCTATTTACGTTTATGCTATCTCTTTTAATCTCTTGTTTGTATGTTATGGCTTCTGATTGTGAAAGATCTATAGTAGGTTTTGATCAGTTTAGCTCCAACGATGCTTAGGTTATGTTACTTTATCGTTTCGCCGTCTTTTCTTGTGTGGAGTGTTTAATTTTGGAATTTGATCAACCGTAGTGTTGTTTTAACCACATATACTCTGATGTCGACCAGTTCAGATCCATAGAAGCATTGATTATTTGTGTTGAGGTTTTAGGTTTGGATTTTGATCAAACATTACAATGTTTCAACTGAATATACTGTTGAGGTATATTTTTGTCGTAGAGTTTGATCAGTTAAGCTCCAGTGTACCATAGATTAATTTACTGTTACTATCAATTTGCCTTTTGTTAGAGTTGCTGTTTTGAATTTGATCAGTATACTCCTTATGCATTGTTCACAAGATTAGCAGCATACTAATGTTTTTTTATTTATGTCTACTGTGTCAGCTTAGAGTGATATTTTTTAGGTTTTTGCATTGAAAACATATTTGTTTTTGGTAAACATGATTAACAAGGATGGTTGTTCTAGTGTTAAATGGATGCGAATAAACAATTATGCTGATTTTTTGGAAAACTGAAGATGTAGTGGATTGAAATTATTGGCAGATGTGGATAGGTTATGTGACAAGTTATATTTGCTGAAGTTTTTGAGTCGTGAGATTGAAATGTAATTGAGCTGTATATGTTCATTACAACACTGTCATTGTAATTTAATCAGTAATGATGATAGGTTACTAAACAGTGGGATGAATTAACTGCAATTATCTTTGTTATTGGTAGATGTCAATATGGAAAGATACCTATTTTGTGGGATTTCATTGGGTATGTTGTTGTATTGGCAGATATTTATTTGGTGTTGCTGCTTTGCGTTATTTGCCTCTTAATCTGATGTTTAGATGACAAAGTGATATTAATGTTTACTCAATCTAGATAACTAGAACATGTTTGCTGGAACAAGCTTATTGGTTGAGCTTGTGCAAGCCAGTTGCAATCCTTGTAGCTCTCCCTATGTCATTGTGCCAACTATTTTTTGTCATATTTCTATGAACTGCCCGTAATCCCTTCCTTTCCACTTAATACAGGTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATGGTACATCCTTGTCTTGACTGTGATTGCAGAAACTCATTTTTCATGCCCTAATTCAGTTTTTAGGTAGCTCTATCAGTTTGCTGTCAACCATTGGGCATTGGTTTTTTTCTTCTTCCAAATAGTCGTTAAAATGTTAGAAGGACTTGGATTTGATAACTCATTTCTCAATCATAATAGAGAAGAATATAAGAGGTGAACTTCCTATGAGAGTCTTTGGCCATAGATGTCATCTAGGCCAATTGAAGTGAGATACAGGAAATATAAGCCTATATTTAGTGTCACTTCATCTTTTTTGTCCTAACTAAATAGTTTTGTGTACTCCATACCTCAAGAAGTTATTTCAATGTAGGCACCTTTTTGGTTGCTTGGTTTGAAAGATTATCTTGCTCATATATTAACTGGCTAGAACTATGCCATTTCTCTCTTCTTTGTAACTAATGAATATTAGCAGGTGAAATTGCTCTGTTGGCTGATGTCTGTTCTTTTCTCAGGTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGAGAAGAACGTTTGGCTC</genome_strand>
        <mrna_strand>TTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGGCAATTCCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGAGAAGAACGTTTGGCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E291871" ref_strand="+" ref_description="SGN-E291871 [cLET-7-N13]">
      <seq>caaaatcgaaaatggtttcgttgaagctccagaagcggctcgccgctagtgtcctcaagtgtggaagaggcaaagtttggcttgatcctaatgaaggcaatgaaatctccatggccaattcccgtcaaaacatcaggaaattggttaaggatggtttcatcatcaggaaaccaaccaaaattcactcgagatctcgtgctcgccgaatgaaggaggccaagaggaaaggccgtcactctggatatggtaagcgcaaaggtaccagggaggctagactgcctaccaaggtgctttggatgaggagattgagagtcctcaggcgtttgcttcgcaagtatagggaatcaaagaagattgacaaacacatgtatcatgacatgtacatgaaggtgaagggtaatgttttcaagaacaagcgtgtgctgatggaaaatatccacaagacaaaggctgagaaggctagagagaaaaccttgtccgaccaatttgaggctaggagggcaaagaacaaggcaagcagagaaagaaagtttgcaaggagagaagaacgtttggc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="65251" stop="62447"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64951" g_stop="64829" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="123" r_length="123" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64828" i_stop="63671" i_length="1158">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.955" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63670" g_stop="63548" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="124" r_stop="246" r_length="123" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63547" i_stop="63057" i_length="491">
            <donor d_prob="0.909" d_score="1.00"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="63056" g_stop="62747" g_length="310"/>
          <reference_exon_boundary r_type="cDNA" r_start="247" r_stop="556" r_length="310" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E291871" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>556</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E291871" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64951" e_stop="64829"/>
          <exon e_start="63670" e_stop="63548"/>
          <exon e_start="63056" e_stop="62747"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCCGTATGTTTCTGTTTTCTGTTTGTTATCAATATCTATTTACGTTTATGCTATCTCTTTTAATCTCTTGTTTGTATGTTATGGCTTCTGATTGTGAAAGATCTATAGTAGGTTTTGATCAGTTTAGCTCCAACGATGCTTAGGTTATGTTACTTTATCGTTTCGCCGTCTTTTCTTGTGTGGAGTGTTTAATTTTGGAATTTGATCAACCGTAGTGTTGTTTTAACCACATATACTCTGATGTCGACCAGTTCAGATCCATAGAAGCATTGATTATTTGTGTTGAGGTTTTAGGTTTGGATTTTGATCAAACATTACAATGTTTCAACTGAATATACTGTTGAGGTATATTTTTGTCGTAGAGTTTGATCAGTTAAGCTCCAGTGTACCATAGATTAATTTACTGTTACTATCAATTTGCCTTTTGTTAGAGTTGCTGTTTTGAATTTGATCAGTATACTCCTTATGCATTGTTCACAAGATTAGCAGCATACTAATGTTTTTTTATTTATGTCTACTGTGTCAGCTTAGAGTGATATTTTTTAGGTTTTTGCATTGAAAACATATTTGTTTTTGGTAAACATGATTAACAAGGATGGTTGTTCTAGTGTTAAATGGATGCGAATAAACAATTATGCTGATTTTTTGGAAAACTGAAGATGTAGTGGATTGAAATTATTGGCAGATGTGGATAGGTTATGTGACAAGTTATATTTGCTGAAGTTTTTGAGTCGTGAGATTGAAATGTAATTGAGCTGTATATGTTCATTACAACACTGTCATTGTAATTTAATCAGTAATGATGATAGGTTACTAAACAGTGGGATGAATTAACTGCAATTATCTTTGTTATTGGTAGATGTCAATATGGAAAGATACCTATTTTGTGGGATTTCATTGGGTATGTTGTTGTATTGGCAGATATTTATTTGGTGTTGCTGCTTTGCGTTATTTGCCTCTTAATCTGATGTTTAGATGACAAAGTGATATTAATGTTTACTCAATCTAGATAACTAGAACATGTTTGCTGGAACAAGCTTATTGGTTGAGCTTGTGCAAGCCAGTTGCAATCCTTGTAGCTCTCCCTATGTCATTGTGCCAACTATTTTTTGTCATATTTCTATGAACTGCCCGTAATCCCTTCCTTTCCACTTAATACAGGTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATGGTACATCCTTGTCTTGACTGTGATTGCAGAAACTCATTTTTCATGCCCTAATTCAGTTTTTAGGTAGCTCTATCAGTTTGCTGTCAACCATTGGGCATTGGTTTTTTTCTTCTTCCAAATAGTCGTTAAAATGTTAGAAGGACTTGGATTTGATAACTCATTTCTCAATCATAATAGAGAAGAATATAAGAGGTGAACTTCCTATGAGAGTCTTTGGCCATAGATGTCATCTAGGCCAATTGAAGTGAGATACAGGAAATATAAGCCTATATTTAGTGTCACTTCATCTTTTTTGTCCTAACTAAATAGTTTTGTGTACTCCATACCTCAAGAAGTTATTTCAATGTAGGCACCTTTTTGGTTGCTTGGTTTGAAAGATTATCTTGCTCATATATTAACTGGCTAGAACTATGCCATTTCTCTCTTCTTTGTAACTAATGAATATTAGCAGGTGAAATTGCTCTGTTGGCTGATGTCTGTTCTTTTCTCAGGTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGAGAAGAACGTTTGGC</genome_strand>
        <mrna_strand>CAAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGAGAAGAACGTTTGGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E279644" ref_strand="+" ref_description="SGN-E279644 [cLER-5-A20]">
      <seq>aaaatcgaaaatggtttcgttgaagctccagaagcggctcgccgctagtgtcctcaagtgtggaagaggcaaagtttggctgatcctaatgaaggcaatgaaatctccatggccaattcccgtcaaaacatcaggaaattggttaaggatggtttcatcatcaggaaaccaaccaaaattcactcgagatctcgtgctcgccgaatgaaggaggccaagaggaaaggccgtcactctggatatggtaagcgcaaaggtaccagggaggctagactgcctaccaaggtgctttggatgaggagattgagagtcctcaggcgtttgcttcgcaagtatagggaatcaaagaagattgacaaacacatgtatcatgacatgtacatgaaggtgaagggtaatgttttcaagaacaagcgtgtgctgatggaaaatatccacaagacaaaggctgagaaggctagagagaaaaccttgtccgaccaatttgaggctaggagggcaaagaacaaggcaagcagagaaagaaagtttgcaaggagagaagaacgtttggc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="65250" stop="62447"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64950" g_stop="64829" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="121" r_length="121" r_score="0.992"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64828" i_stop="63671" i_length="1158">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.955" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63670" g_stop="63548" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="122" r_stop="244" r_length="123" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63547" i_stop="63057" i_length="491">
            <donor d_prob="0.909" d_score="1.00"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="63056" g_stop="62747" g_length="310"/>
          <reference_exon_boundary r_type="cDNA" r_start="245" r_stop="554" r_length="310" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E279644" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>555</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E279644" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64950" e_stop="64829"/>
          <exon e_start="63670" e_stop="63548"/>
          <exon e_start="63056" e_stop="62747"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCCGTATGTTTCTGTTTTCTGTTTGTTATCAATATCTATTTACGTTTATGCTATCTCTTTTAATCTCTTGTTTGTATGTTATGGCTTCTGATTGTGAAAGATCTATAGTAGGTTTTGATCAGTTTAGCTCCAACGATGCTTAGGTTATGTTACTTTATCGTTTCGCCGTCTTTTCTTGTGTGGAGTGTTTAATTTTGGAATTTGATCAACCGTAGTGTTGTTTTAACCACATATACTCTGATGTCGACCAGTTCAGATCCATAGAAGCATTGATTATTTGTGTTGAGGTTTTAGGTTTGGATTTTGATCAAACATTACAATGTTTCAACTGAATATACTGTTGAGGTATATTTTTGTCGTAGAGTTTGATCAGTTAAGCTCCAGTGTACCATAGATTAATTTACTGTTACTATCAATTTGCCTTTTGTTAGAGTTGCTGTTTTGAATTTGATCAGTATACTCCTTATGCATTGTTCACAAGATTAGCAGCATACTAATGTTTTTTTATTTATGTCTACTGTGTCAGCTTAGAGTGATATTTTTTAGGTTTTTGCATTGAAAACATATTTGTTTTTGGTAAACATGATTAACAAGGATGGTTGTTCTAGTGTTAAATGGATGCGAATAAACAATTATGCTGATTTTTTGGAAAACTGAAGATGTAGTGGATTGAAATTATTGGCAGATGTGGATAGGTTATGTGACAAGTTATATTTGCTGAAGTTTTTGAGTCGTGAGATTGAAATGTAATTGAGCTGTATATGTTCATTACAACACTGTCATTGTAATTTAATCAGTAATGATGATAGGTTACTAAACAGTGGGATGAATTAACTGCAATTATCTTTGTTATTGGTAGATGTCAATATGGAAAGATACCTATTTTGTGGGATTTCATTGGGTATGTTGTTGTATTGGCAGATATTTATTTGGTGTTGCTGCTTTGCGTTATTTGCCTCTTAATCTGATGTTTAGATGACAAAGTGATATTAATGTTTACTCAATCTAGATAACTAGAACATGTTTGCTGGAACAAGCTTATTGGTTGAGCTTGTGCAAGCCAGTTGCAATCCTTGTAGCTCTCCCTATGTCATTGTGCCAACTATTTTTTGTCATATTTCTATGAACTGCCCGTAATCCCTTCCTTTCCACTTAATACAGGTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATGGTACATCCTTGTCTTGACTGTGATTGCAGAAACTCATTTTTCATGCCCTAATTCAGTTTTTAGGTAGCTCTATCAGTTTGCTGTCAACCATTGGGCATTGGTTTTTTTCTTCTTCCAAATAGTCGTTAAAATGTTAGAAGGACTTGGATTTGATAACTCATTTCTCAATCATAATAGAGAAGAATATAAGAGGTGAACTTCCTATGAGAGTCTTTGGCCATAGATGTCATCTAGGCCAATTGAAGTGAGATACAGGAAATATAAGCCTATATTTAGTGTCACTTCATCTTTTTTGTCCTAACTAAATAGTTTTGTGTACTCCATACCTCAAGAAGTTATTTCAATGTAGGCACCTTTTTGGTTGCTTGGTTTGAAAGATTATCTTGCTCATATATTAACTGGCTAGAACTATGCCATTTCTCTCTTCTTTGTAACTAATGAATATTAGCAGGTGAAATTGCTCTGTTGGCTGATGTCTGTTCTTTTCTCAGGTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGAGAAGAACGTTTGGC</genome_strand>
        <mrna_strand>AAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGC-TGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGAGAAGAACGTTTGGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E288445" ref_strand="+" ref_description="SGN-E288445 [cLES-16-J4]">
      <seq>aaaatcgaaaatggtttcgttgaagctccagaagcggctcgccgctagtgtcctcaagtgtggaagaggcaaagtttggcttgatcctaatgaaggcaatgaaatctccatggccaattcccgtcaaaacatcaggaaattggttaaggatggtttcatcatcaggaaaccaaccaaaattcactcgagatctcgtgctcgccgaatgaaggaggccaagaggaaaggccgtcactctggatatggtaagcgcaaaggtaccagggaggctagactgcctaccaaggtgctttggatgaggagattgagagtcctcaggcgtttgcttcgcaagtatagggaatcaaagaagattgacaaacacatgtatcatgacatgtacatgaaggtgaagggtaatgttttcaagaacaagcgtgtgctgatggaaaatatccacaagacaaaggctgagaaggctagagagaaaaccttgtccgaccaatttgaggctaggagggcaaagaacaaggcaagcagagaaagaaagtttgcaaggagagaagaacgtttggc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="65250" stop="62447"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64950" g_stop="64829" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="122" r_length="122" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64828" i_stop="63671" i_length="1158">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.955" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63670" g_stop="63548" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="123" r_stop="245" r_length="123" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63547" i_stop="63057" i_length="491">
            <donor d_prob="0.909" d_score="1.00"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="63056" g_stop="62747" g_length="310"/>
          <reference_exon_boundary r_type="cDNA" r_start="246" r_stop="555" r_length="310" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E288445" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>555</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E288445" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64950" e_stop="64829"/>
          <exon e_start="63670" e_stop="63548"/>
          <exon e_start="63056" e_stop="62747"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCCGTATGTTTCTGTTTTCTGTTTGTTATCAATATCTATTTACGTTTATGCTATCTCTTTTAATCTCTTGTTTGTATGTTATGGCTTCTGATTGTGAAAGATCTATAGTAGGTTTTGATCAGTTTAGCTCCAACGATGCTTAGGTTATGTTACTTTATCGTTTCGCCGTCTTTTCTTGTGTGGAGTGTTTAATTTTGGAATTTGATCAACCGTAGTGTTGTTTTAACCACATATACTCTGATGTCGACCAGTTCAGATCCATAGAAGCATTGATTATTTGTGTTGAGGTTTTAGGTTTGGATTTTGATCAAACATTACAATGTTTCAACTGAATATACTGTTGAGGTATATTTTTGTCGTAGAGTTTGATCAGTTAAGCTCCAGTGTACCATAGATTAATTTACTGTTACTATCAATTTGCCTTTTGTTAGAGTTGCTGTTTTGAATTTGATCAGTATACTCCTTATGCATTGTTCACAAGATTAGCAGCATACTAATGTTTTTTTATTTATGTCTACTGTGTCAGCTTAGAGTGATATTTTTTAGGTTTTTGCATTGAAAACATATTTGTTTTTGGTAAACATGATTAACAAGGATGGTTGTTCTAGTGTTAAATGGATGCGAATAAACAATTATGCTGATTTTTTGGAAAACTGAAGATGTAGTGGATTGAAATTATTGGCAGATGTGGATAGGTTATGTGACAAGTTATATTTGCTGAAGTTTTTGAGTCGTGAGATTGAAATGTAATTGAGCTGTATATGTTCATTACAACACTGTCATTGTAATTTAATCAGTAATGATGATAGGTTACTAAACAGTGGGATGAATTAACTGCAATTATCTTTGTTATTGGTAGATGTCAATATGGAAAGATACCTATTTTGTGGGATTTCATTGGGTATGTTGTTGTATTGGCAGATATTTATTTGGTGTTGCTGCTTTGCGTTATTTGCCTCTTAATCTGATGTTTAGATGACAAAGTGATATTAATGTTTACTCAATCTAGATAACTAGAACATGTTTGCTGGAACAAGCTTATTGGTTGAGCTTGTGCAAGCCAGTTGCAATCCTTGTAGCTCTCCCTATGTCATTGTGCCAACTATTTTTTGTCATATTTCTATGAACTGCCCGTAATCCCTTCCTTTCCACTTAATACAGGTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATGGTACATCCTTGTCTTGACTGTGATTGCAGAAACTCATTTTTCATGCCCTAATTCAGTTTTTAGGTAGCTCTATCAGTTTGCTGTCAACCATTGGGCATTGGTTTTTTTCTTCTTCCAAATAGTCGTTAAAATGTTAGAAGGACTTGGATTTGATAACTCATTTCTCAATCATAATAGAGAAGAATATAAGAGGTGAACTTCCTATGAGAGTCTTTGGCCATAGATGTCATCTAGGCCAATTGAAGTGAGATACAGGAAATATAAGCCTATATTTAGTGTCACTTCATCTTTTTTGTCCTAACTAAATAGTTTTGTGTACTCCATACCTCAAGAAGTTATTTCAATGTAGGCACCTTTTTGGTTGCTTGGTTTGAAAGATTATCTTGCTCATATATTAACTGGCTAGAACTATGCCATTTCTCTCTTCTTTGTAACTAATGAATATTAGCAGGTGAAATTGCTCTGTTGGCTGATGTCTGTTCTTTTCTCAGGTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGAGAAGAACGTTTGGC</genome_strand>
        <mrna_strand>AAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGAGAAGAACGTTTGGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E291858" ref_strand="+" ref_description="SGN-E291858 [cLET-7-H11]">
      <seq>caaaatcgaaaatggtttcgttgaagctccagaagcggctcgccgctagtgtcctcaagtgtggaagaggcaaagtttggcttgatcctaatgaaggcaatgaaatctccatggccaattcccgtcaaaacatcaggaaattggttaaggatggtttcatcatcaggaaaccaaccaaaattcactcgagatctcgtgctcgccgaatgaaggaggccaagaggaaaggccgtcactctggatatggtaagcgcaaaggtaccagggaggctagactgcctaccaaggtgctttggatgaggagattgagagtcctcaggcgtttgcttcgcaagtatagggaatcaaagaagattgacaaacacatgtatcatgacatgtacatgaaggtgaagggtaatgttttcaagaacaagcgtgtgctgatggaaaatatccacaagacaaaagctgagaaggctagagagaaaaccttgtccgaccaatttgaggctaggagggcaaagaacaaggcaagcagagaaagaaagtttgcaaggagagaagaacgtttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="65251" stop="62449"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64951" g_stop="64829" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="123" r_length="123" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64828" i_stop="63671" i_length="1158">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.955" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63670" g_stop="63548" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="124" r_stop="246" r_length="123" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63547" i_stop="63057" i_length="491">
            <donor d_prob="0.909" d_score="1.00"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="63056" g_stop="62749" g_length="308"/>
          <reference_exon_boundary r_type="cDNA" r_start="247" r_stop="554" r_length="308" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E291858" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>554</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E291858" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64951" e_stop="64829"/>
          <exon e_start="63670" e_stop="63548"/>
          <exon e_start="63056" e_stop="62749"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCCGTATGTTTCTGTTTTCTGTTTGTTATCAATATCTATTTACGTTTATGCTATCTCTTTTAATCTCTTGTTTGTATGTTATGGCTTCTGATTGTGAAAGATCTATAGTAGGTTTTGATCAGTTTAGCTCCAACGATGCTTAGGTTATGTTACTTTATCGTTTCGCCGTCTTTTCTTGTGTGGAGTGTTTAATTTTGGAATTTGATCAACCGTAGTGTTGTTTTAACCACATATACTCTGATGTCGACCAGTTCAGATCCATAGAAGCATTGATTATTTGTGTTGAGGTTTTAGGTTTGGATTTTGATCAAACATTACAATGTTTCAACTGAATATACTGTTGAGGTATATTTTTGTCGTAGAGTTTGATCAGTTAAGCTCCAGTGTACCATAGATTAATTTACTGTTACTATCAATTTGCCTTTTGTTAGAGTTGCTGTTTTGAATTTGATCAGTATACTCCTTATGCATTGTTCACAAGATTAGCAGCATACTAATGTTTTTTTATTTATGTCTACTGTGTCAGCTTAGAGTGATATTTTTTAGGTTTTTGCATTGAAAACATATTTGTTTTTGGTAAACATGATTAACAAGGATGGTTGTTCTAGTGTTAAATGGATGCGAATAAACAATTATGCTGATTTTTTGGAAAACTGAAGATGTAGTGGATTGAAATTATTGGCAGATGTGGATAGGTTATGTGACAAGTTATATTTGCTGAAGTTTTTGAGTCGTGAGATTGAAATGTAATTGAGCTGTATATGTTCATTACAACACTGTCATTGTAATTTAATCAGTAATGATGATAGGTTACTAAACAGTGGGATGAATTAACTGCAATTATCTTTGTTATTGGTAGATGTCAATATGGAAAGATACCTATTTTGTGGGATTTCATTGGGTATGTTGTTGTATTGGCAGATATTTATTTGGTGTTGCTGCTTTGCGTTATTTGCCTCTTAATCTGATGTTTAGATGACAAAGTGATATTAATGTTTACTCAATCTAGATAACTAGAACATGTTTGCTGGAACAAGCTTATTGGTTGAGCTTGTGCAAGCCAGTTGCAATCCTTGTAGCTCTCCCTATGTCATTGTGCCAACTATTTTTTGTCATATTTCTATGAACTGCCCGTAATCCCTTCCTTTCCACTTAATACAGGTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATGGTACATCCTTGTCTTGACTGTGATTGCAGAAACTCATTTTTCATGCCCTAATTCAGTTTTTAGGTAGCTCTATCAGTTTGCTGTCAACCATTGGGCATTGGTTTTTTTCTTCTTCCAAATAGTCGTTAAAATGTTAGAAGGACTTGGATTTGATAACTCATTTCTCAATCATAATAGAGAAGAATATAAGAGGTGAACTTCCTATGAGAGTCTTTGGCCATAGATGTCATCTAGGCCAATTGAAGTGAGATACAGGAAATATAAGCCTATATTTAGTGTCACTTCATCTTTTTTGTCCTAACTAAATAGTTTTGTGTACTCCATACCTCAAGAAGTTATTTCAATGTAGGCACCTTTTTGGTTGCTTGGTTTGAAAGATTATCTTGCTCATATATTAACTGGCTAGAACTATGCCATTTCTCTCTTCTTTGTAACTAATGAATATTAGCAGGTGAAATTGCTCTGTTGGCTGATGTCTGTTCTTTTCTCAGGTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGAGAAGAACGTTTG</genome_strand>
        <mrna_strand>CAAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAAGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGAGAAGAACGTTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E591855" ref_strand="+" ref_description="SGN-E591855 [45576]">
      <seq>caaaatcgaaaatggtttcgttgaagctccagaagcggctcgccgctagtgtcctcaagtgtggaagaggaaaagtttggcttgatcctaatgaagggaatgaaatctccatggccaattcccgtcaaaacatcaggaaattggttaaggatggtttcatcatcaggaaaccaaccaaaattcactcaagatctcgtgctcgcagaatgaaggaggccaagaggaaaggccgtcactctggatatggtaagcgcaaaggtaccagggaggctagactgcctaccaaggtgctttggatgaggagattgagagtcctcaggcgtttgcttcgcaagtatagggaatcaaagaagattgacaaacacatgtatcatgacatgtacatgaaggtgaagggtaatgttttcaagaacaagcgtgtgctgatggaaaatatccacaagacaaaggctgagaaggctagagagaagaccttgtccgaccaatttgaggctaggagggcaaagaacaaaggcaagcagagaaagaaagtttgcaagggagggaagaacgtttgggct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="65251" stop="62446"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64951" g_stop="64829" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="123" r_length="123" r_score="0.984"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64828" i_stop="63671" i_length="1158">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.955" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63670" g_stop="63548" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="124" r_stop="246" r_length="123" r_score="0.984"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63547" i_stop="63057" i_length="491">
            <donor d_prob="0.909" d_score="0.98"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="63056" g_stop="62750" g_length="307"/>
          <reference_exon_boundary r_type="cDNA" r_start="247" r_stop="555" r_length="309" r_score="0.980"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E591855" ref_strand="+">
        <total_alignment_score>0.982</total_alignment_score>
        <cumulative_length_of_scored_exons>553</cumulative_length_of_scored_exons>
        <coverage percentage="0.988" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E591855" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64951" e_stop="64829"/>
          <exon e_start="63670" e_stop="63548"/>
          <exon e_start="63056" e_stop="62750"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCCGTATGTTTCTGTTTTCTGTTTGTTATCAATATCTATTTACGTTTATGCTATCTCTTTTAATCTCTTGTTTGTATGTTATGGCTTCTGATTGTGAAAGATCTATAGTAGGTTTTGATCAGTTTAGCTCCAACGATGCTTAGGTTATGTTACTTTATCGTTTCGCCGTCTTTTCTTGTGTGGAGTGTTTAATTTTGGAATTTGATCAACCGTAGTGTTGTTTTAACCACATATACTCTGATGTCGACCAGTTCAGATCCATAGAAGCATTGATTATTTGTGTTGAGGTTTTAGGTTTGGATTTTGATCAAACATTACAATGTTTCAACTGAATATACTGTTGAGGTATATTTTTGTCGTAGAGTTTGATCAGTTAAGCTCCAGTGTACCATAGATTAATTTACTGTTACTATCAATTTGCCTTTTGTTAGAGTTGCTGTTTTGAATTTGATCAGTATACTCCTTATGCATTGTTCACAAGATTAGCAGCATACTAATGTTTTTTTATTTATGTCTACTGTGTCAGCTTAGAGTGATATTTTTTAGGTTTTTGCATTGAAAACATATTTGTTTTTGGTAAACATGATTAACAAGGATGGTTGTTCTAGTGTTAAATGGATGCGAATAAACAATTATGCTGATTTTTTGGAAAACTGAAGATGTAGTGGATTGAAATTATTGGCAGATGTGGATAGGTTATGTGACAAGTTATATTTGCTGAAGTTTTTGAGTCGTGAGATTGAAATGTAATTGAGCTGTATATGTTCATTACAACACTGTCATTGTAATTTAATCAGTAATGATGATAGGTTACTAAACAGTGGGATGAATTAACTGCAATTATCTTTGTTATTGGTAGATGTCAATATGGAAAGATACCTATTTTGTGGGATTTCATTGGGTATGTTGTTGTATTGGCAGATATTTATTTGGTGTTGCTGCTTTGCGTTATTTGCCTCTTAATCTGATGTTTAGATGACAAAGTGATATTAATGTTTACTCAATCTAGATAACTAGAACATGTTTGCTGGAACAAGCTTATTGGTTGAGCTTGTGCAAGCCAGTTGCAATCCTTGTAGCTCTCCCTATGTCATTGTGCCAACTATTTTTTGTCATATTTCTATGAACTGCCCGTAATCCCTTCCTTTCCACTTAATACAGGTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATGGTACATCCTTGTCTTGACTGTGATTGCAGAAACTCATTTTTCATGCCCTAATTCAGTTTTTAGGTAGCTCTATCAGTTTGCTGTCAACCATTGGGCATTGGTTTTTTTCTTCTTCCAAATAGTCGTTAAAATGTTAGAAGGACTTGGATTTGATAACTCATTTCTCAATCATAATAGAGAAGAATATAAGAGGTGAACTTCCTATGAGAGTCTTTGGCCATAGATGTCATCTAGGCCAATTGAAGTGAGATACAGGAAATATAAGCCTATATTTAGTGTCACTTCATCTTTTTTGTCCTAACTAAATAGTTTTGTGTACTCCATACCTCAAGAAGTTATTTCAATGTAGGCACCTTTTTGGTTGCTTGGTTTGAAAGATTATCTTGCTCATATATTAACTGGCTAGAACTATGCCATTTCTCTCTTCTTTGTAACTAATGAATATTAGCAGGTGAAATTGCTCTGTTGGCTGATGTCTGTTCTTTTCTCAGGTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAAC-AAGGCAAGCAGAGAAAGAAAGTTTGCAA-GGAGAGAAGAACGTTT</genome_strand>
        <mrna_strand>CAAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGAAAAGTTTGGCTTGATCCTAATGAAGGGAATGAAATCTCCATGGCCAATTCCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCAAGATCTCGTGCTCGCAGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAGACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGGAGGGAAGAACGTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E291047" ref_strand="+" ref_description="SGN-E291047 [cLET-8-E9]">
      <seq>aaaatcgaaaatggtttcgttgaagctccagaagcggctcgccgctagtgtcctcaagtgtggaagaggcaaagtttggcttgatcctaatgaaggcaatgaaatctccatggccaattcccgtcaaaacatcaggaaattggttaaggatggtttcatcatcaggaaaccaaccaaaattcactcgagatctcgtgctcgccgaatgaaggaggccaagaggaaaggccgtcactctggatatggtaagcgcaaaggtaccagggaggctagactgcctaccaaggtgctttggatgaggagattgagagtcctcaggcgtttgcttcgcaagtatagggaatcaaagaagattgacaaagagcatgtatcgtgacatgtacatgaaggtgaagggtaatgttttcaagaacaagcgtgtgctgatggaaaatatccacaagacaaaggctgagaaggctagagagaaaaccttgtccgaccaatttgaggctaggagggcaaagaacaaggcaagcagagaaagaaagtttgcaaggagagaagaacgttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="65250" stop="62450"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64950" g_stop="64829" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="122" r_length="122" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64828" i_stop="63671" i_length="1158">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.955" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63670" g_stop="63548" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="123" r_stop="245" r_length="123" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63547" i_stop="63057" i_length="491">
            <donor d_prob="0.909" d_score="1.00"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="63056" g_stop="62750" g_length="307"/>
          <reference_exon_boundary r_type="cDNA" r_start="246" r_stop="553" r_length="308" r_score="0.987"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E291047" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>552</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E291047" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64950" e_stop="64829"/>
          <exon e_start="63670" e_stop="63548"/>
          <exon e_start="63056" e_stop="62750"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCCGTATGTTTCTGTTTTCTGTTTGTTATCAATATCTATTTACGTTTATGCTATCTCTTTTAATCTCTTGTTTGTATGTTATGGCTTCTGATTGTGAAAGATCTATAGTAGGTTTTGATCAGTTTAGCTCCAACGATGCTTAGGTTATGTTACTTTATCGTTTCGCCGTCTTTTCTTGTGTGGAGTGTTTAATTTTGGAATTTGATCAACCGTAGTGTTGTTTTAACCACATATACTCTGATGTCGACCAGTTCAGATCCATAGAAGCATTGATTATTTGTGTTGAGGTTTTAGGTTTGGATTTTGATCAAACATTACAATGTTTCAACTGAATATACTGTTGAGGTATATTTTTGTCGTAGAGTTTGATCAGTTAAGCTCCAGTGTACCATAGATTAATTTACTGTTACTATCAATTTGCCTTTTGTTAGAGTTGCTGTTTTGAATTTGATCAGTATACTCCTTATGCATTGTTCACAAGATTAGCAGCATACTAATGTTTTTTTATTTATGTCTACTGTGTCAGCTTAGAGTGATATTTTTTAGGTTTTTGCATTGAAAACATATTTGTTTTTGGTAAACATGATTAACAAGGATGGTTGTTCTAGTGTTAAATGGATGCGAATAAACAATTATGCTGATTTTTTGGAAAACTGAAGATGTAGTGGATTGAAATTATTGGCAGATGTGGATAGGTTATGTGACAAGTTATATTTGCTGAAGTTTTTGAGTCGTGAGATTGAAATGTAATTGAGCTGTATATGTTCATTACAACACTGTCATTGTAATTTAATCAGTAATGATGATAGGTTACTAAACAGTGGGATGAATTAACTGCAATTATCTTTGTTATTGGTAGATGTCAATATGGAAAGATACCTATTTTGTGGGATTTCATTGGGTATGTTGTTGTATTGGCAGATATTTATTTGGTGTTGCTGCTTTGCGTTATTTGCCTCTTAATCTGATGTTTAGATGACAAAGTGATATTAATGTTTACTCAATCTAGATAACTAGAACATGTTTGCTGGAACAAGCTTATTGGTTGAGCTTGTGCAAGCCAGTTGCAATCCTTGTAGCTCTCCCTATGTCATTGTGCCAACTATTTTTTGTCATATTTCTATGAACTGCCCGTAATCCCTTCCTTTCCACTTAATACAGGTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATGGTACATCCTTGTCTTGACTGTGATTGCAGAAACTCATTTTTCATGCCCTAATTCAGTTTTTAGGTAGCTCTATCAGTTTGCTGTCAACCATTGGGCATTGGTTTTTTTCTTCTTCCAAATAGTCGTTAAAATGTTAGAAGGACTTGGATTTGATAACTCATTTCTCAATCATAATAGAGAAGAATATAAGAGGTGAACTTCCTATGAGAGTCTTTGGCCATAGATGTCATCTAGGCCAATTGAAGTGAGATACAGGAAATATAAGCCTATATTTAGTGTCACTTCATCTTTTTTGTCCTAACTAAATAGTTTTGTGTACTCCATACCTCAAGAAGTTATTTCAATGTAGGCACCTTTTTGGTTGCTTGGTTTGAAAGATTATCTTGCTCATATATTAACTGGCTAGAACTATGCCATTTCTCTCTTCTTTGTAACTAATGAATATTAGCAGGTGAAATTGCTCTGTTGGCTGATGTCTGTTCTTTTCTCAGGTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACA-CATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGAGAAGAACGTTT</genome_strand>
        <mrna_strand>AAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAAGAGCATGTATCGTGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGAGAAGAACGTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E311036" ref_strand="+" ref_description="SGN-E311036 [cLEZ-17-J11]">
      <seq>agcttcacaaaatcgaaaatggtttcgttgaagctccagaagcggctcgccgctagtgtcctcaagtgtggaagaggcaaagtttggcttgatcctaatgaaggcaatgaaatctccatggccaattcccgtcaaaacatcaggaaattggttaaggatggtttcatcatcaggaaaccaaccaaaattcactcgagatctcgtgctcgccgaatgaaggaggccaagaggaaaggccgtcactctggatatggtaagcgcaaaggtaccagggaggctagactgcctaccaaggtgctttggatgaggagattgagagtcctcaggcgtttgcttcgcaagtatagggaatcaaagaagattgacaaacacatgtatcatgacatgtacatgaaggtgaagggtaatgttttcaagaacaagcgtgtgctgatggaaaatatccacaagacaaaggctgagaaggctagagagaaaaccttgtccgaccaatttgaggctaggagggcaaagaacaaggcaagcagagaaagaaagtttgcaaggagagaagaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="65258" stop="62454"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64958" g_stop="64829" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="130" r_length="130" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64828" i_stop="63671" i_length="1158">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.955" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63670" g_stop="63548" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="131" r_stop="253" r_length="123" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63547" i_stop="63057" i_length="491">
            <donor d_prob="0.909" d_score="1.00"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="63056" g_stop="62754" g_length="303"/>
          <reference_exon_boundary r_type="cDNA" r_start="254" r_stop="556" r_length="303" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E311036" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>556</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E311036" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64958" e_stop="64829"/>
          <exon e_start="63670" e_stop="63548"/>
          <exon e_start="63056" e_stop="62754"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGCTTCACAAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCCGTATGTTTCTGTTTTCTGTTTGTTATCAATATCTATTTACGTTTATGCTATCTCTTTTAATCTCTTGTTTGTATGTTATGGCTTCTGATTGTGAAAGATCTATAGTAGGTTTTGATCAGTTTAGCTCCAACGATGCTTAGGTTATGTTACTTTATCGTTTCGCCGTCTTTTCTTGTGTGGAGTGTTTAATTTTGGAATTTGATCAACCGTAGTGTTGTTTTAACCACATATACTCTGATGTCGACCAGTTCAGATCCATAGAAGCATTGATTATTTGTGTTGAGGTTTTAGGTTTGGATTTTGATCAAACATTACAATGTTTCAACTGAATATACTGTTGAGGTATATTTTTGTCGTAGAGTTTGATCAGTTAAGCTCCAGTGTACCATAGATTAATTTACTGTTACTATCAATTTGCCTTTTGTTAGAGTTGCTGTTTTGAATTTGATCAGTATACTCCTTATGCATTGTTCACAAGATTAGCAGCATACTAATGTTTTTTTATTTATGTCTACTGTGTCAGCTTAGAGTGATATTTTTTAGGTTTTTGCATTGAAAACATATTTGTTTTTGGTAAACATGATTAACAAGGATGGTTGTTCTAGTGTTAAATGGATGCGAATAAACAATTATGCTGATTTTTTGGAAAACTGAAGATGTAGTGGATTGAAATTATTGGCAGATGTGGATAGGTTATGTGACAAGTTATATTTGCTGAAGTTTTTGAGTCGTGAGATTGAAATGTAATTGAGCTGTATATGTTCATTACAACACTGTCATTGTAATTTAATCAGTAATGATGATAGGTTACTAAACAGTGGGATGAATTAACTGCAATTATCTTTGTTATTGGTAGATGTCAATATGGAAAGATACCTATTTTGTGGGATTTCATTGGGTATGTTGTTGTATTGGCAGATATTTATTTGGTGTTGCTGCTTTGCGTTATTTGCCTCTTAATCTGATGTTTAGATGACAAAGTGATATTAATGTTTACTCAATCTAGATAACTAGAACATGTTTGCTGGAACAAGCTTATTGGTTGAGCTTGTGCAAGCCAGTTGCAATCCTTGTAGCTCTCCCTATGTCATTGTGCCAACTATTTTTTGTCATATTTCTATGAACTGCCCGTAATCCCTTCCTTTCCACTTAATACAGGTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATGGTACATCCTTGTCTTGACTGTGATTGCAGAAACTCATTTTTCATGCCCTAATTCAGTTTTTAGGTAGCTCTATCAGTTTGCTGTCAACCATTGGGCATTGGTTTTTTTCTTCTTCCAAATAGTCGTTAAAATGTTAGAAGGACTTGGATTTGATAACTCATTTCTCAATCATAATAGAGAAGAATATAAGAGGTGAACTTCCTATGAGAGTCTTTGGCCATAGATGTCATCTAGGCCAATTGAAGTGAGATACAGGAAATATAAGCCTATATTTAGTGTCACTTCATCTTTTTTGTCCTAACTAAATAGTTTTGTGTACTCCATACCTCAAGAAGTTATTTCAATGTAGGCACCTTTTTGGTTGCTTGGTTTGAAAGATTATCTTGCTCATATATTAACTGGCTAGAACTATGCCATTTCTCTCTTCTTTGTAACTAATGAATATTAGCAGGTGAAATTGCTCTGTTGGCTGATGTCTGTTCTTTTCTCAGGTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGAGAAGAAC</genome_strand>
        <mrna_strand>AGCTTCACAAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGAGAAGAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E570638" ref_strand="+" ref_description="SGN-E570638 [15254]">
      <seq>acaaaatcgaaaatggtttcgttgaagctccagaagcggctcgccgctagtgtcctcaagtgtggaagaggaaaagtttggcttgatcctaatgaagggaatgaaatctccatggccaattcccgtcaaaacatcaggaaattggttaaggatggtttcatcatcaggaaaccaaccaaaattcactcaagatctcgtgctcgcagaatgaaggaggccaagaggaaaggccgtcactctggatatggtaagcgcaaaggtaccagggaggctagactgcctaccaaggtgctttggatgaggagattgagagtcctcaggcgtttgcttcgcaagtatagggaatcaaagaagattgacaaacacatgtatcatgacatgtacatgaaggtgaagggtaatgttttcaagaacaagcgtgtgctgatggaaaatatccacaagacaaaggctgagaaggctagangagaagaccttgtccgaccaatttgaggctaggagggcaaagaacaaggcaagcagagaaagaaagtctgcaaaggaggggaagaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="65252" stop="62455"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64952" g_stop="64829" g_length="124"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="124" r_length="124" r_score="0.984"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64828" i_stop="63671" i_length="1158">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.955" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63670" g_stop="63548" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="125" r_stop="247" r_length="123" r_score="0.984"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63547" i_stop="63057" i_length="491">
            <donor d_prob="0.909" d_score="0.98"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="63056" g_stop="62755" g_length="302"/>
          <reference_exon_boundary r_type="cDNA" r_start="248" r_stop="552" r_length="305" r_score="0.970"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E570638" ref_strand="+">
        <total_alignment_score>0.976</total_alignment_score>
        <cumulative_length_of_scored_exons>549</cumulative_length_of_scored_exons>
        <coverage percentage="0.995" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E570638" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64952" e_stop="64829"/>
          <exon e_start="63670" e_stop="63548"/>
          <exon e_start="63056" e_stop="62755"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACAAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCCGTATGTTTCTGTTTTCTGTTTGTTATCAATATCTATTTACGTTTATGCTATCTCTTTTAATCTCTTGTTTGTATGTTATGGCTTCTGATTGTGAAAGATCTATAGTAGGTTTTGATCAGTTTAGCTCCAACGATGCTTAGGTTATGTTACTTTATCGTTTCGCCGTCTTTTCTTGTGTGGAGTGTTTAATTTTGGAATTTGATCAACCGTAGTGTTGTTTTAACCACATATACTCTGATGTCGACCAGTTCAGATCCATAGAAGCATTGATTATTTGTGTTGAGGTTTTAGGTTTGGATTTTGATCAAACATTACAATGTTTCAACTGAATATACTGTTGAGGTATATTTTTGTCGTAGAGTTTGATCAGTTAAGCTCCAGTGTACCATAGATTAATTTACTGTTACTATCAATTTGCCTTTTGTTAGAGTTGCTGTTTTGAATTTGATCAGTATACTCCTTATGCATTGTTCACAAGATTAGCAGCATACTAATGTTTTTTTATTTATGTCTACTGTGTCAGCTTAGAGTGATATTTTTTAGGTTTTTGCATTGAAAACATATTTGTTTTTGGTAAACATGATTAACAAGGATGGTTGTTCTAGTGTTAAATGGATGCGAATAAACAATTATGCTGATTTTTTGGAAAACTGAAGATGTAGTGGATTGAAATTATTGGCAGATGTGGATAGGTTATGTGACAAGTTATATTTGCTGAAGTTTTTGAGTCGTGAGATTGAAATGTAATTGAGCTGTATATGTTCATTACAACACTGTCATTGTAATTTAATCAGTAATGATGATAGGTTACTAAACAGTGGGATGAATTAACTGCAATTATCTTTGTTATTGGTAGATGTCAATATGGAAAGATACCTATTTTGTGGGATTTCATTGGGTATGTTGTTGTATTGGCAGATATTTATTTGGTGTTGCTGCTTTGCGTTATTTGCCTCTTAATCTGATGTTTAGATGACAAAGTGATATTAATGTTTACTCAATCTAGATAACTAGAACATGTTTGCTGGAACAAGCTTATTGGTTGAGCTTGTGCAAGCCAGTTGCAATCCTTGTAGCTCTCCCTATGTCATTGTGCCAACTATTTTTTGTCATATTTCTATGAACTGCCCGTAATCCCTTCCTTTCCACTTAATACAGGTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATGGTACATCCTTGTCTTGACTGTGATTGCAGAAACTCATTTTTCATGCCCTAATTCAGTTTTTAGGTAGCTCTATCAGTTTGCTGTCAACCATTGGGCATTGGTTTTTTTCTTCTTCCAAATAGTCGTTAAAATGTTAGAAGGACTTGGATTTGATAACTCATTTCTCAATCATAATAGAGAAGAATATAAGAGGTGAACTTCCTATGAGAGTCTTTGGCCATAGATGTCATCTAGGCCAATTGAAGTGAGATACAGGAAATATAAGCCTATATTTAGTGTCACTTCATCTTTTTTGTCCTAACTAAATAGTTTTGTGTACTCCATACCTCAAGAAGTTATTTCAATGTAGGCACCTTTTTGGTTGCTTGGTTTGAAAGATTATCTTGCTCATATATTAACTGGCTAGAACTATGCCATTTCTCTCTTCTTTGTAACTAATGAATATTAGCAGGTGAAATTGCTCTGTTGGCTGATGTCTGTTCTTTTCTCAGGTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGA-GAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGC-AAGGA-GAGAAGAA</genome_strand>
        <mrna_strand>ACAAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGAAAAGTTTGGCTTGATCCTAATGAAGGGAATGAAATCTCCATGGCCAATTCCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCAAGATCTCGTGCTCGCAGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGANGAGAAGACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTCTGCAAAGGAGGGGAAGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E299174" ref_strand="+" ref_description="SGN-E299174 [cLET-42-J4]">
      <seq>aaaatcgaaaatggtttcgttgaagctccagaagcggctcgccgctagtgtcctcaagtgtggaagaggcaaagtttggcttgatcctaatgaaggcaatgaaatctccatggccaattcccgtcaaaacatcaggaaattggttaaggatggtttcatcatcaggaaaccaaccaaaattcactcgagatctcgtgctcgccgaatgaaggaggccaagaggaaaggccgtcactctggatatggtaagcgcaaaggtaccagggaggctagactgcctaccaaggtgctttggatgaggagattgagagtcctcaggcgtttgcttcgcaagtatagggaatcaaagaagattgacaaacacatgtatcatgacatgtacatgaaggtgaagggtaatgttttcaagaacaagcgtgtgctgatggaaaatatccacaagacaaaggctgagaaggctagagagaaaaccttgtccgaccaatttgaggctaggagggcaaagaacaaggcaagcagagaaagaaagtttgcaaggag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="65250" stop="62462"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64950" g_stop="64829" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="122" r_length="122" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64828" i_stop="63671" i_length="1158">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.955" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63670" g_stop="63548" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="123" r_stop="245" r_length="123" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63547" i_stop="63057" i_length="491">
            <donor d_prob="0.909" d_score="1.00"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="63056" g_stop="62762" g_length="295"/>
          <reference_exon_boundary r_type="cDNA" r_start="246" r_stop="540" r_length="295" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E299174" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>540</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E299174" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64950" e_stop="64829"/>
          <exon e_start="63670" e_stop="63548"/>
          <exon e_start="63056" e_stop="62762"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCCGTATGTTTCTGTTTTCTGTTTGTTATCAATATCTATTTACGTTTATGCTATCTCTTTTAATCTCTTGTTTGTATGTTATGGCTTCTGATTGTGAAAGATCTATAGTAGGTTTTGATCAGTTTAGCTCCAACGATGCTTAGGTTATGTTACTTTATCGTTTCGCCGTCTTTTCTTGTGTGGAGTGTTTAATTTTGGAATTTGATCAACCGTAGTGTTGTTTTAACCACATATACTCTGATGTCGACCAGTTCAGATCCATAGAAGCATTGATTATTTGTGTTGAGGTTTTAGGTTTGGATTTTGATCAAACATTACAATGTTTCAACTGAATATACTGTTGAGGTATATTTTTGTCGTAGAGTTTGATCAGTTAAGCTCCAGTGTACCATAGATTAATTTACTGTTACTATCAATTTGCCTTTTGTTAGAGTTGCTGTTTTGAATTTGATCAGTATACTCCTTATGCATTGTTCACAAGATTAGCAGCATACTAATGTTTTTTTATTTATGTCTACTGTGTCAGCTTAGAGTGATATTTTTTAGGTTTTTGCATTGAAAACATATTTGTTTTTGGTAAACATGATTAACAAGGATGGTTGTTCTAGTGTTAAATGGATGCGAATAAACAATTATGCTGATTTTTTGGAAAACTGAAGATGTAGTGGATTGAAATTATTGGCAGATGTGGATAGGTTATGTGACAAGTTATATTTGCTGAAGTTTTTGAGTCGTGAGATTGAAATGTAATTGAGCTGTATATGTTCATTACAACACTGTCATTGTAATTTAATCAGTAATGATGATAGGTTACTAAACAGTGGGATGAATTAACTGCAATTATCTTTGTTATTGGTAGATGTCAATATGGAAAGATACCTATTTTGTGGGATTTCATTGGGTATGTTGTTGTATTGGCAGATATTTATTTGGTGTTGCTGCTTTGCGTTATTTGCCTCTTAATCTGATGTTTAGATGACAAAGTGATATTAATGTTTACTCAATCTAGATAACTAGAACATGTTTGCTGGAACAAGCTTATTGGTTGAGCTTGTGCAAGCCAGTTGCAATCCTTGTAGCTCTCCCTATGTCATTGTGCCAACTATTTTTTGTCATATTTCTATGAACTGCCCGTAATCCCTTCCTTTCCACTTAATACAGGTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATGGTACATCCTTGTCTTGACTGTGATTGCAGAAACTCATTTTTCATGCCCTAATTCAGTTTTTAGGTAGCTCTATCAGTTTGCTGTCAACCATTGGGCATTGGTTTTTTTCTTCTTCCAAATAGTCGTTAAAATGTTAGAAGGACTTGGATTTGATAACTCATTTCTCAATCATAATAGAGAAGAATATAAGAGGTGAACTTCCTATGAGAGTCTTTGGCCATAGATGTCATCTAGGCCAATTGAAGTGAGATACAGGAAATATAAGCCTATATTTAGTGTCACTTCATCTTTTTTGTCCTAACTAAATAGTTTTGTGTACTCCATACCTCAAGAAGTTATTTCAATGTAGGCACCTTTTTGGTTGCTTGGTTTGAAAGATTATCTTGCTCATATATTAACTGGCTAGAACTATGCCATTTCTCTCTTCTTTGTAACTAATGAATATTAGCAGGTGAAATTGCTCTGTTGGCTGATGTCTGTTCTTTTCTCAGGTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAG</genome_strand>
        <mrna_strand>AAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E574513" ref_strand="+" ref_description="SGN-E574513 [33992]">
      <seq>caaaatcgaaaatggtttcgttgaagctccagaagcggctcgccgctagtgtcctcaagtgtggaagaggaaaagtttggcttgatcctaatgaagggaatgaaatctccatggccaattcccgtcaaaacatcaggaaattggttaaggatggtttcatcatcaggaaaccaaccaaaattcactcaagatctcgtgctcgcagaatgaaggaggccaagaggaaaggccgtcactctggatatggtaagcgcaaaggtaccagggaggctagactgcctaccaaggtgctttggatgaggagattgagagtcctcaggcgtttgcttcgcaagtatagggaatcaaagaagattgacaaacacatgtatcatgacatgtacatgaaggtgaagggtaatgttttcaagaacaagcgtgtgctgatggaaaatatccacaagacaaaggctgagaaggctagagagaagaccttgtccgaccaatttgaggctaggagggcaaagaacaaggcaagcagagaaagaaagtttgca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="65251" stop="62467"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64951" g_stop="64829" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="123" r_length="123" r_score="0.984"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64828" i_stop="63671" i_length="1158">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.955" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63670" g_stop="63548" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="124" r_stop="246" r_length="123" r_score="0.984"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63547" i_stop="63057" i_length="491">
            <donor d_prob="0.909" d_score="0.98"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="63056" g_stop="62767" g_length="290"/>
          <reference_exon_boundary r_type="cDNA" r_start="247" r_stop="536" r_length="290" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E574513" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>536</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E574513" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64951" e_stop="64829"/>
          <exon e_start="63670" e_stop="63548"/>
          <exon e_start="63056" e_stop="62767"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCCGTATGTTTCTGTTTTCTGTTTGTTATCAATATCTATTTACGTTTATGCTATCTCTTTTAATCTCTTGTTTGTATGTTATGGCTTCTGATTGTGAAAGATCTATAGTAGGTTTTGATCAGTTTAGCTCCAACGATGCTTAGGTTATGTTACTTTATCGTTTCGCCGTCTTTTCTTGTGTGGAGTGTTTAATTTTGGAATTTGATCAACCGTAGTGTTGTTTTAACCACATATACTCTGATGTCGACCAGTTCAGATCCATAGAAGCATTGATTATTTGTGTTGAGGTTTTAGGTTTGGATTTTGATCAAACATTACAATGTTTCAACTGAATATACTGTTGAGGTATATTTTTGTCGTAGAGTTTGATCAGTTAAGCTCCAGTGTACCATAGATTAATTTACTGTTACTATCAATTTGCCTTTTGTTAGAGTTGCTGTTTTGAATTTGATCAGTATACTCCTTATGCATTGTTCACAAGATTAGCAGCATACTAATGTTTTTTTATTTATGTCTACTGTGTCAGCTTAGAGTGATATTTTTTAGGTTTTTGCATTGAAAACATATTTGTTTTTGGTAAACATGATTAACAAGGATGGTTGTTCTAGTGTTAAATGGATGCGAATAAACAATTATGCTGATTTTTTGGAAAACTGAAGATGTAGTGGATTGAAATTATTGGCAGATGTGGATAGGTTATGTGACAAGTTATATTTGCTGAAGTTTTTGAGTCGTGAGATTGAAATGTAATTGAGCTGTATATGTTCATTACAACACTGTCATTGTAATTTAATCAGTAATGATGATAGGTTACTAAACAGTGGGATGAATTAACTGCAATTATCTTTGTTATTGGTAGATGTCAATATGGAAAGATACCTATTTTGTGGGATTTCATTGGGTATGTTGTTGTATTGGCAGATATTTATTTGGTGTTGCTGCTTTGCGTTATTTGCCTCTTAATCTGATGTTTAGATGACAAAGTGATATTAATGTTTACTCAATCTAGATAACTAGAACATGTTTGCTGGAACAAGCTTATTGGTTGAGCTTGTGCAAGCCAGTTGCAATCCTTGTAGCTCTCCCTATGTCATTGTGCCAACTATTTTTTGTCATATTTCTATGAACTGCCCGTAATCCCTTCCTTTCCACTTAATACAGGTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATGGTACATCCTTGTCTTGACTGTGATTGCAGAAACTCATTTTTCATGCCCTAATTCAGTTTTTAGGTAGCTCTATCAGTTTGCTGTCAACCATTGGGCATTGGTTTTTTTCTTCTTCCAAATAGTCGTTAAAATGTTAGAAGGACTTGGATTTGATAACTCATTTCTCAATCATAATAGAGAAGAATATAAGAGGTGAACTTCCTATGAGAGTCTTTGGCCATAGATGTCATCTAGGCCAATTGAAGTGAGATACAGGAAATATAAGCCTATATTTAGTGTCACTTCATCTTTTTTGTCCTAACTAAATAGTTTTGTGTACTCCATACCTCAAGAAGTTATTTCAATGTAGGCACCTTTTTGGTTGCTTGGTTTGAAAGATTATCTTGCTCATATATTAACTGGCTAGAACTATGCCATTTCTCTCTTCTTTGTAACTAATGAATATTAGCAGGTGAAATTGCTCTGTTGGCTGATGTCTGTTCTTTTCTCAGGTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCA</genome_strand>
        <mrna_strand>CAAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGAAAAGTTTGGCTTGATCCTAATGAAGGGAATGAAATCTCCATGGCCAATTCCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCAAGATCTCGTGCTCGCAGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAGACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E320094" ref_strand="+" ref_description="SGN-E320094 [cTOB-21-M12]">
      <seq>caaaatcgaaaatggtttcgttgaagctccagaagcggctcgccgctagtgtcctcaagtgtggaagaggcaaagtttggcttgatcctaatgaaggcaatgaaatctccatggccaattcccgtcaaaacatcaggaaattggttaaggatggtttcatcatcaggaaaccaaccaaaattcactcgagatctcgtgctcgccgaatgaaggaggccaagaggaaaggccgtcactctggatatggtaagcgcaaaggtaccagggaggctagactgcctaccaaggtgctttggatgaggagattgagagtcctcaggcgtttgcttcgcaagtatagggaatcaaagaagattgacaaacacatgtatcatgacatgtacatgaaggtgaagggtaatgttttcaagaacaagcgtgtgctgatggaaaatatccacaagacaaaggctgagaaggctaaagagaaaaccttgtccgaccaatttgaggctangagggcaaagaacaatgcaagcagagaaagaaagtttgca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="65251" stop="62467"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64951" g_stop="64829" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="123" r_length="123" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64828" i_stop="63671" i_length="1158">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.955" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63670" g_stop="63548" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="124" r_stop="246" r_length="123" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63547" i_stop="63057" i_length="491">
            <donor d_prob="0.909" d_score="1.00"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="63056" g_stop="62767" g_length="290"/>
          <reference_exon_boundary r_type="cDNA" r_start="247" r_stop="536" r_length="290" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E320094" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>536</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E320094" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64951" e_stop="64829"/>
          <exon e_start="63670" e_stop="63548"/>
          <exon e_start="63056" e_stop="62767"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCCGTATGTTTCTGTTTTCTGTTTGTTATCAATATCTATTTACGTTTATGCTATCTCTTTTAATCTCTTGTTTGTATGTTATGGCTTCTGATTGTGAAAGATCTATAGTAGGTTTTGATCAGTTTAGCTCCAACGATGCTTAGGTTATGTTACTTTATCGTTTCGCCGTCTTTTCTTGTGTGGAGTGTTTAATTTTGGAATTTGATCAACCGTAGTGTTGTTTTAACCACATATACTCTGATGTCGACCAGTTCAGATCCATAGAAGCATTGATTATTTGTGTTGAGGTTTTAGGTTTGGATTTTGATCAAACATTACAATGTTTCAACTGAATATACTGTTGAGGTATATTTTTGTCGTAGAGTTTGATCAGTTAAGCTCCAGTGTACCATAGATTAATTTACTGTTACTATCAATTTGCCTTTTGTTAGAGTTGCTGTTTTGAATTTGATCAGTATACTCCTTATGCATTGTTCACAAGATTAGCAGCATACTAATGTTTTTTTATTTATGTCTACTGTGTCAGCTTAGAGTGATATTTTTTAGGTTTTTGCATTGAAAACATATTTGTTTTTGGTAAACATGATTAACAAGGATGGTTGTTCTAGTGTTAAATGGATGCGAATAAACAATTATGCTGATTTTTTGGAAAACTGAAGATGTAGTGGATTGAAATTATTGGCAGATGTGGATAGGTTATGTGACAAGTTATATTTGCTGAAGTTTTTGAGTCGTGAGATTGAAATGTAATTGAGCTGTATATGTTCATTACAACACTGTCATTGTAATTTAATCAGTAATGATGATAGGTTACTAAACAGTGGGATGAATTAACTGCAATTATCTTTGTTATTGGTAGATGTCAATATGGAAAGATACCTATTTTGTGGGATTTCATTGGGTATGTTGTTGTATTGGCAGATATTTATTTGGTGTTGCTGCTTTGCGTTATTTGCCTCTTAATCTGATGTTTAGATGACAAAGTGATATTAATGTTTACTCAATCTAGATAACTAGAACATGTTTGCTGGAACAAGCTTATTGGTTGAGCTTGTGCAAGCCAGTTGCAATCCTTGTAGCTCTCCCTATGTCATTGTGCCAACTATTTTTTGTCATATTTCTATGAACTGCCCGTAATCCCTTCCTTTCCACTTAATACAGGTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATGGTACATCCTTGTCTTGACTGTGATTGCAGAAACTCATTTTTCATGCCCTAATTCAGTTTTTAGGTAGCTCTATCAGTTTGCTGTCAACCATTGGGCATTGGTTTTTTTCTTCTTCCAAATAGTCGTTAAAATGTTAGAAGGACTTGGATTTGATAACTCATTTCTCAATCATAATAGAGAAGAATATAAGAGGTGAACTTCCTATGAGAGTCTTTGGCCATAGATGTCATCTAGGCCAATTGAAGTGAGATACAGGAAATATAAGCCTATATTTAGTGTCACTTCATCTTTTTTGTCCTAACTAAATAGTTTTGTGTACTCCATACCTCAAGAAGTTATTTCAATGTAGGCACCTTTTTGGTTGCTTGGTTTGAAAGATTATCTTGCTCATATATTAACTGGCTAGAACTATGCCATTTCTCTCTTCTTTGTAACTAATGAATATTAGCAGGTGAAATTGCTCTGTTGGCTGATGTCTGTTCTTTTCTCAGGTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCA</genome_strand>
        <mrna_strand>CAAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAAAGAGAAAACCTTGTCCGACCAATTTGAGGCTANGAGGGCAAAGAACAATGCAAGCAGAGAAAGAAAGTTTGCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E312181" ref_strand="+" ref_description="SGN-E312181 [cTOA-11-H1]">
      <seq>acaaaatcgaaaatggtttcgttgaagctccagaagcggctcgccgctagtgtcctcaagtgtggaagaggcaaagtttggcttgatcctaatgaaggcaatgaaatctccatggccaattcccgtcaaaacatcaggaaattggttaaggatggtttcatcatcaggaaaccaaccaaaattcactcgagatctcgtgctcgccgaatgaaggaggccaagaggaaaggccgtcactctggatatggtaagcgcaaaggtaccagggaggctagactgcctaccaaggtgctttggatgaggagattgagagtcctcaggcgtttgcttcgcaagtatagggaatcaaagaagattgacaaacacatgtatcatgacatgtacatgaaggtgaagggtaatgttttcaagaacaagcgtgtgctgatggaaaatatccacaagacaaaggctgagaaggctagagagaaaaccttgtccgaccaatttgaggctaggagggcaaagaacaaggcaagcag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="65252" stop="62483"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64952" g_stop="64829" g_length="124"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="124" r_length="124" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64828" i_stop="63671" i_length="1158">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.955" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63670" g_stop="63548" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="125" r_stop="247" r_length="123" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63547" i_stop="63057" i_length="491">
            <donor d_prob="0.909" d_score="1.00"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="63056" g_stop="62783" g_length="274"/>
          <reference_exon_boundary r_type="cDNA" r_start="248" r_stop="521" r_length="274" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E312181" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>521</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E312181" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64952" e_stop="64829"/>
          <exon e_start="63670" e_stop="63548"/>
          <exon e_start="63056" e_stop="62783"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACAAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCCGTATGTTTCTGTTTTCTGTTTGTTATCAATATCTATTTACGTTTATGCTATCTCTTTTAATCTCTTGTTTGTATGTTATGGCTTCTGATTGTGAAAGATCTATAGTAGGTTTTGATCAGTTTAGCTCCAACGATGCTTAGGTTATGTTACTTTATCGTTTCGCCGTCTTTTCTTGTGTGGAGTGTTTAATTTTGGAATTTGATCAACCGTAGTGTTGTTTTAACCACATATACTCTGATGTCGACCAGTTCAGATCCATAGAAGCATTGATTATTTGTGTTGAGGTTTTAGGTTTGGATTTTGATCAAACATTACAATGTTTCAACTGAATATACTGTTGAGGTATATTTTTGTCGTAGAGTTTGATCAGTTAAGCTCCAGTGTACCATAGATTAATTTACTGTTACTATCAATTTGCCTTTTGTTAGAGTTGCTGTTTTGAATTTGATCAGTATACTCCTTATGCATTGTTCACAAGATTAGCAGCATACTAATGTTTTTTTATTTATGTCTACTGTGTCAGCTTAGAGTGATATTTTTTAGGTTTTTGCATTGAAAACATATTTGTTTTTGGTAAACATGATTAACAAGGATGGTTGTTCTAGTGTTAAATGGATGCGAATAAACAATTATGCTGATTTTTTGGAAAACTGAAGATGTAGTGGATTGAAATTATTGGCAGATGTGGATAGGTTATGTGACAAGTTATATTTGCTGAAGTTTTTGAGTCGTGAGATTGAAATGTAATTGAGCTGTATATGTTCATTACAACACTGTCATTGTAATTTAATCAGTAATGATGATAGGTTACTAAACAGTGGGATGAATTAACTGCAATTATCTTTGTTATTGGTAGATGTCAATATGGAAAGATACCTATTTTGTGGGATTTCATTGGGTATGTTGTTGTATTGGCAGATATTTATTTGGTGTTGCTGCTTTGCGTTATTTGCCTCTTAATCTGATGTTTAGATGACAAAGTGATATTAATGTTTACTCAATCTAGATAACTAGAACATGTTTGCTGGAACAAGCTTATTGGTTGAGCTTGTGCAAGCCAGTTGCAATCCTTGTAGCTCTCCCTATGTCATTGTGCCAACTATTTTTTGTCATATTTCTATGAACTGCCCGTAATCCCTTCCTTTCCACTTAATACAGGTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATGGTACATCCTTGTCTTGACTGTGATTGCAGAAACTCATTTTTCATGCCCTAATTCAGTTTTTAGGTAGCTCTATCAGTTTGCTGTCAACCATTGGGCATTGGTTTTTTTCTTCTTCCAAATAGTCGTTAAAATGTTAGAAGGACTTGGATTTGATAACTCATTTCTCAATCATAATAGAGAAGAATATAAGAGGTGAACTTCCTATGAGAGTCTTTGGCCATAGATGTCATCTAGGCCAATTGAAGTGAGATACAGGAAATATAAGCCTATATTTAGTGTCACTTCATCTTTTTTGTCCTAACTAAATAGTTTTGTGTACTCCATACCTCAAGAAGTTATTTCAATGTAGGCACCTTTTTGGTTGCTTGGTTTGAAAGATTATCTTGCTCATATATTAACTGGCTAGAACTATGCCATTTCTCTCTTCTTTGTAACTAATGAATATTAGCAGGTGAAATTGCTCTGTTGGCTGATGTCTGTTCTTTTCTCAGGTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAG</genome_strand>
        <mrna_strand>ACAAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E366107" ref_strand="+" ref_description="SGN-E366107 [cLPT-15-G4]">
      <seq>gaaaatggtttcgttgaagctccagaagcggctcgccgctagtgtcctcaagtgtggaagaggcaaagtttggcttgatcctaatgaaggcaatgaaatctccatggccaattcccgtcaaaacatcaggaaattggtgaaggatggtttcatcatcaggaaaccaaccaaaattcactcgagatctcgtgctcgccgaatgaaggaggccaagaggaaaggccgtcactctggatatggtaagcgcaaaggtaccagggaggctagacttcctaccaaggtgctttggatgaggagattgagagtcctcaggcgtttgcttcgcaagtatagggaatcaaagaagattgacaaacacatgtatcatgacatgtacatgaaggtgaagggtaatgttttcaagaacaagcgtgtgctgatggaaaatatccacaagacaaaggctgagaaggctagagaaaagaccttgtctgaccaatttgaggctaggagggcaaagaacaaggcaagc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="65244" stop="62485"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64944" g_stop="64829" g_length="116"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="116" r_length="116" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64828" i_stop="63671" i_length="1158">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.955" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63670" g_stop="63548" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="117" r_stop="239" r_length="123" r_score="0.992"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63547" i_stop="63057" i_length="491">
            <donor d_prob="0.909" d_score="1.00"/>
            <acceptor a_prob="0.975" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="63056" g_stop="62785" g_length="272"/>
          <reference_exon_boundary r_type="cDNA" r_start="240" r_stop="511" r_length="272" r_score="0.985"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E366107" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>511</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E366107" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64944" e_stop="64829"/>
          <exon e_start="63670" e_stop="63548"/>
          <exon e_start="63056" e_stop="62785"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCCGTATGTTTCTGTTTTCTGTTTGTTATCAATATCTATTTACGTTTATGCTATCTCTTTTAATCTCTTGTTTGTATGTTATGGCTTCTGATTGTGAAAGATCTATAGTAGGTTTTGATCAGTTTAGCTCCAACGATGCTTAGGTTATGTTACTTTATCGTTTCGCCGTCTTTTCTTGTGTGGAGTGTTTAATTTTGGAATTTGATCAACCGTAGTGTTGTTTTAACCACATATACTCTGATGTCGACCAGTTCAGATCCATAGAAGCATTGATTATTTGTGTTGAGGTTTTAGGTTTGGATTTTGATCAAACATTACAATGTTTCAACTGAATATACTGTTGAGGTATATTTTTGTCGTAGAGTTTGATCAGTTAAGCTCCAGTGTACCATAGATTAATTTACTGTTACTATCAATTTGCCTTTTGTTAGAGTTGCTGTTTTGAATTTGATCAGTATACTCCTTATGCATTGTTCACAAGATTAGCAGCATACTAATGTTTTTTTATTTATGTCTACTGTGTCAGCTTAGAGTGATATTTTTTAGGTTTTTGCATTGAAAACATATTTGTTTTTGGTAAACATGATTAACAAGGATGGTTGTTCTAGTGTTAAATGGATGCGAATAAACAATTATGCTGATTTTTTGGAAAACTGAAGATGTAGTGGATTGAAATTATTGGCAGATGTGGATAGGTTATGTGACAAGTTATATTTGCTGAAGTTTTTGAGTCGTGAGATTGAAATGTAATTGAGCTGTATATGTTCATTACAACACTGTCATTGTAATTTAATCAGTAATGATGATAGGTTACTAAACAGTGGGATGAATTAACTGCAATTATCTTTGTTATTGGTAGATGTCAATATGGAAAGATACCTATTTTGTGGGATTTCATTGGGTATGTTGTTGTATTGGCAGATATTTATTTGGTGTTGCTGCTTTGCGTTATTTGCCTCTTAATCTGATGTTTAGATGACAAAGTGATATTAATGTTTACTCAATCTAGATAACTAGAACATGTTTGCTGGAACAAGCTTATTGGTTGAGCTTGTGCAAGCCAGTTGCAATCCTTGTAGCTCTCCCTATGTCATTGTGCCAACTATTTTTTGTCATATTTCTATGAACTGCCCGTAATCCCTTCCTTTCCACTTAATACAGGTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATGGTACATCCTTGTCTTGACTGTGATTGCAGAAACTCATTTTTCATGCCCTAATTCAGTTTTTAGGTAGCTCTATCAGTTTGCTGTCAACCATTGGGCATTGGTTTTTTTCTTCTTCCAAATAGTCGTTAAAATGTTAGAAGGACTTGGATTTGATAACTCATTTCTCAATCATAATAGAGAAGAATATAAGAGGTGAACTTCCTATGAGAGTCTTTGGCCATAGATGTCATCTAGGCCAATTGAAGTGAGATACAGGAAATATAAGCCTATATTTAGTGTCACTTCATCTTTTTTGTCCTAACTAAATAGTTTTGTGTACTCCATACCTCAAGAAGTTATTTCAATGTAGGCACCTTTTTGGTTGCTTGGTTTGAAAGATTATCTTGCTCATATATTAACTGGCTAGAACTATGCCATTTCTCTCTTCTTTGTAACTAATGAATATTAGCAGGTGAAATTGCTCTGTTGGCTGATGTCTGTTCTTTTCTCAGGTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGC</genome_strand>
        <mrna_strand>GAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAAAACATCAGGAAATTGGTGAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGCGCAAAGGTACCAGGGAGGCTAGACTTCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAAAAGACCTTGTCTGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E399900" ref_strand="+" ref_description="SGN-E399900 [cSTC-3-C3]">
      <seq>acaaaatcgaaaatggtttcgttgaagctccagaagcggctcgccgctagtgtcctcaagtgtggaagaggaaaagtttggcttgatcctaatgaagggagtgaaatttccatggccaattcccgtcaaaacatcaggaaattggttaaggatggtttcatcatcaggaaaccaaccaaaattcactcaagatctcgtgctcgcagaatgaaggaggccaagaggaaaggccgtcactctggatatggtaagcgcaaaggtaccagggaggctagactgcctaccaaggtgctttggatgaggagattgagagtcctcaggcgtttgcttcgcaagtatagggaatcaaagaagattgacaaacacatgtatcatgacatgtacatgaaggtgaagggtaatgttttcaagaacaagcgtgtgctgatggaaaatatccacaagacaaaggctgagaaggctagagagaagaccttgtccgaccaatttgaggctaggagggca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="65252" stop="62500"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64952" g_stop="64829" g_length="124"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="124" r_length="124" r_score="0.968"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64828" i_stop="63671" i_length="1158">
            <donor d_prob="0.998" d_score="0.94"/>
            <acceptor a_prob="0.955" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63670" g_stop="63548" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="125" r_stop="247" r_length="123" r_score="0.984"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63547" i_stop="63057" i_length="491">
            <donor d_prob="0.909" d_score="0.98"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="63056" g_stop="62800" g_length="257"/>
          <reference_exon_boundary r_type="cDNA" r_start="248" r_stop="504" r_length="257" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E399900" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>504</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E399900" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64952" e_stop="64829"/>
          <exon e_start="63670" e_stop="63548"/>
          <exon e_start="63056" e_stop="62800"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACAAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCCGTATGTTTCTGTTTTCTGTTTGTTATCAATATCTATTTACGTTTATGCTATCTCTTTTAATCTCTTGTTTGTATGTTATGGCTTCTGATTGTGAAAGATCTATAGTAGGTTTTGATCAGTTTAGCTCCAACGATGCTTAGGTTATGTTACTTTATCGTTTCGCCGTCTTTTCTTGTGTGGAGTGTTTAATTTTGGAATTTGATCAACCGTAGTGTTGTTTTAACCACATATACTCTGATGTCGACCAGTTCAGATCCATAGAAGCATTGATTATTTGTGTTGAGGTTTTAGGTTTGGATTTTGATCAAACATTACAATGTTTCAACTGAATATACTGTTGAGGTATATTTTTGTCGTAGAGTTTGATCAGTTAAGCTCCAGTGTACCATAGATTAATTTACTGTTACTATCAATTTGCCTTTTGTTAGAGTTGCTGTTTTGAATTTGATCAGTATACTCCTTATGCATTGTTCACAAGATTAGCAGCATACTAATGTTTTTTTATTTATGTCTACTGTGTCAGCTTAGAGTGATATTTTTTAGGTTTTTGCATTGAAAACATATTTGTTTTTGGTAAACATGATTAACAAGGATGGTTGTTCTAGTGTTAAATGGATGCGAATAAACAATTATGCTGATTTTTTGGAAAACTGAAGATGTAGTGGATTGAAATTATTGGCAGATGTGGATAGGTTATGTGACAAGTTATATTTGCTGAAGTTTTTGAGTCGTGAGATTGAAATGTAATTGAGCTGTATATGTTCATTACAACACTGTCATTGTAATTTAATCAGTAATGATGATAGGTTACTAAACAGTGGGATGAATTAACTGCAATTATCTTTGTTATTGGTAGATGTCAATATGGAAAGATACCTATTTTGTGGGATTTCATTGGGTATGTTGTTGTATTGGCAGATATTTATTTGGTGTTGCTGCTTTGCGTTATTTGCCTCTTAATCTGATGTTTAGATGACAAAGTGATATTAATGTTTACTCAATCTAGATAACTAGAACATGTTTGCTGGAACAAGCTTATTGGTTGAGCTTGTGCAAGCCAGTTGCAATCCTTGTAGCTCTCCCTATGTCATTGTGCCAACTATTTTTTGTCATATTTCTATGAACTGCCCGTAATCCCTTCCTTTCCACTTAATACAGGTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATGGTACATCCTTGTCTTGACTGTGATTGCAGAAACTCATTTTTCATGCCCTAATTCAGTTTTTAGGTAGCTCTATCAGTTTGCTGTCAACCATTGGGCATTGGTTTTTTTCTTCTTCCAAATAGTCGTTAAAATGTTAGAAGGACTTGGATTTGATAACTCATTTCTCAATCATAATAGAGAAGAATATAAGAGGTGAACTTCCTATGAGAGTCTTTGGCCATAGATGTCATCTAGGCCAATTGAAGTGAGATACAGGAAATATAAGCCTATATTTAGTGTCACTTCATCTTTTTTGTCCTAACTAAATAGTTTTGTGTACTCCATACCTCAAGAAGTTATTTCAATGTAGGCACCTTTTTGGTTGCTTGGTTTGAAAGATTATCTTGCTCATATATTAACTGGCTAGAACTATGCCATTTCTCTCTTCTTTGTAACTAATGAATATTAGCAGGTGAAATTGCTCTGTTGGCTGATGTCTGTTCTTTTCTCAGGTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCA</genome_strand>
        <mrna_strand>ACAAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGAAAAGTTTGGCTTGATCCTAATGAAGGGAGTGAAATTTCCATGGCCAATTCCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCAAGATCTCGTGCTCGCAGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAGACCTTGTCCGACCAATTTGAGGCTAGGAGGGCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E287885" ref_strand="+" ref_description="SGN-E287885 [cLES-19-D21]">
      <seq>aaaatcgaaaatggtttcgttgaagctccagaagcggctcgccgctagtgtcctcaagtgtggaagaggcaaagtttggcttgatcctaatgaaggcaatgaaatctccatggccaattcccgtcaaaacatcaggaaattggttaaggatggtttcatcatcaggaaaccaaccaaaattcactcgagatctcgtgctcgccgaatgaaggaggccaagaggaaaggccgtcactctggatatggtaagcgcaaaggtaccagggaggctagactgcctaccaaggtgctttggatgaggagattgagagtcctcaggcgtttgcttcgcaagtatagggaatcaaagaagattgacaaacacatgtatcatgacatgtacatgaaggtgaagggtaatgttttcaagaacaagcgtgtgctgatggaaaatatccacaagacaaaggctgagaaggctagagagaaaaccttgtccgaccaatttga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="65250" stop="62513"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64950" g_stop="64829" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="122" r_length="122" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64828" i_stop="63671" i_length="1158">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.955" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63670" g_stop="63548" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="123" r_stop="245" r_length="123" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63547" i_stop="63057" i_length="491">
            <donor d_prob="0.909" d_score="1.00"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="63056" g_stop="62813" g_length="244"/>
          <reference_exon_boundary r_type="cDNA" r_start="246" r_stop="489" r_length="244" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E287885" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>489</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E287885" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64950" e_stop="64829"/>
          <exon e_start="63670" e_stop="63548"/>
          <exon e_start="63056" e_stop="62813"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCCGTATGTTTCTGTTTTCTGTTTGTTATCAATATCTATTTACGTTTATGCTATCTCTTTTAATCTCTTGTTTGTATGTTATGGCTTCTGATTGTGAAAGATCTATAGTAGGTTTTGATCAGTTTAGCTCCAACGATGCTTAGGTTATGTTACTTTATCGTTTCGCCGTCTTTTCTTGTGTGGAGTGTTTAATTTTGGAATTTGATCAACCGTAGTGTTGTTTTAACCACATATACTCTGATGTCGACCAGTTCAGATCCATAGAAGCATTGATTATTTGTGTTGAGGTTTTAGGTTTGGATTTTGATCAAACATTACAATGTTTCAACTGAATATACTGTTGAGGTATATTTTTGTCGTAGAGTTTGATCAGTTAAGCTCCAGTGTACCATAGATTAATTTACTGTTACTATCAATTTGCCTTTTGTTAGAGTTGCTGTTTTGAATTTGATCAGTATACTCCTTATGCATTGTTCACAAGATTAGCAGCATACTAATGTTTTTTTATTTATGTCTACTGTGTCAGCTTAGAGTGATATTTTTTAGGTTTTTGCATTGAAAACATATTTGTTTTTGGTAAACATGATTAACAAGGATGGTTGTTCTAGTGTTAAATGGATGCGAATAAACAATTATGCTGATTTTTTGGAAAACTGAAGATGTAGTGGATTGAAATTATTGGCAGATGTGGATAGGTTATGTGACAAGTTATATTTGCTGAAGTTTTTGAGTCGTGAGATTGAAATGTAATTGAGCTGTATATGTTCATTACAACACTGTCATTGTAATTTAATCAGTAATGATGATAGGTTACTAAACAGTGGGATGAATTAACTGCAATTATCTTTGTTATTGGTAGATGTCAATATGGAAAGATACCTATTTTGTGGGATTTCATTGGGTATGTTGTTGTATTGGCAGATATTTATTTGGTGTTGCTGCTTTGCGTTATTTGCCTCTTAATCTGATGTTTAGATGACAAAGTGATATTAATGTTTACTCAATCTAGATAACTAGAACATGTTTGCTGGAACAAGCTTATTGGTTGAGCTTGTGCAAGCCAGTTGCAATCCTTGTAGCTCTCCCTATGTCATTGTGCCAACTATTTTTTGTCATATTTCTATGAACTGCCCGTAATCCCTTCCTTTCCACTTAATACAGGTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATGGTACATCCTTGTCTTGACTGTGATTGCAGAAACTCATTTTTCATGCCCTAATTCAGTTTTTAGGTAGCTCTATCAGTTTGCTGTCAACCATTGGGCATTGGTTTTTTTCTTCTTCCAAATAGTCGTTAAAATGTTAGAAGGACTTGGATTTGATAACTCATTTCTCAATCATAATAGAGAAGAATATAAGAGGTGAACTTCCTATGAGAGTCTTTGGCCATAGATGTCATCTAGGCCAATTGAAGTGAGATACAGGAAATATAAGCCTATATTTAGTGTCACTTCATCTTTTTTGTCCTAACTAAATAGTTTTGTGTACTCCATACCTCAAGAAGTTATTTCAATGTAGGCACCTTTTTGGTTGCTTGGTTTGAAAGATTATCTTGCTCATATATTAACTGGCTAGAACTATGCCATTTCTCTCTTCTTTGTAACTAATGAATATTAGCAGGTGAAATTGCTCTGTTGGCTGATGTCTGTTCTTTTCTCAGGTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGA</genome_strand>
        <mrna_strand>AAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E299345" ref_strand="+" ref_description="SGN-E299345 [cLET-43-N20]">
      <seq>gcagcttcacaaaatcgaaaatggtttcgttgaagctccataagcggctcgccgctagtgtcctcaagtgtggaagaggcaaagtttggcttgatcctaatgaaggcaatgaaatctccatggccaattcccgtcaaaacatcatgaaattggttaaggatggtttcatcatcaggaaaccaaccaaaattcactcgagatctcgtgctcgccgaatgaaggaggccaataggaaaggccgtcactctggatatggtaagcgcaaaggtaccagggaggctagactgcctaccaaggtgctttggatgatgagattgagagtcctcaagcgtttgcttcgcacgtatagggaatcaaagaagattgacaaacacatgtatcatgacatgtacatgaaggtgaagggtaatgttttcaagaacaagcgtgtgctgatggaaaatatccacaagacaaaggctgagaaagctagagagaaaaccttgtccgaccaatttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="65260" stop="62514"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64960" g_stop="64829" g_length="132"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="132" r_length="132" r_score="0.992"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64828" i_stop="63671" i_length="1158">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.955" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63670" g_stop="63548" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="133" r_stop="255" r_length="123" r_score="0.984"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63547" i_stop="63057" i_length="491">
            <donor d_prob="0.909" d_score="0.98"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="63056" g_stop="62814" g_length="243"/>
          <reference_exon_boundary r_type="cDNA" r_start="256" r_stop="498" r_length="243" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E299345" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>498</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E299345" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64960" e_stop="64829"/>
          <exon e_start="63670" e_stop="63548"/>
          <exon e_start="63056" e_stop="62814"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAGCTTCACAAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCCGTATGTTTCTGTTTTCTGTTTGTTATCAATATCTATTTACGTTTATGCTATCTCTTTTAATCTCTTGTTTGTATGTTATGGCTTCTGATTGTGAAAGATCTATAGTAGGTTTTGATCAGTTTAGCTCCAACGATGCTTAGGTTATGTTACTTTATCGTTTCGCCGTCTTTTCTTGTGTGGAGTGTTTAATTTTGGAATTTGATCAACCGTAGTGTTGTTTTAACCACATATACTCTGATGTCGACCAGTTCAGATCCATAGAAGCATTGATTATTTGTGTTGAGGTTTTAGGTTTGGATTTTGATCAAACATTACAATGTTTCAACTGAATATACTGTTGAGGTATATTTTTGTCGTAGAGTTTGATCAGTTAAGCTCCAGTGTACCATAGATTAATTTACTGTTACTATCAATTTGCCTTTTGTTAGAGTTGCTGTTTTGAATTTGATCAGTATACTCCTTATGCATTGTTCACAAGATTAGCAGCATACTAATGTTTTTTTATTTATGTCTACTGTGTCAGCTTAGAGTGATATTTTTTAGGTTTTTGCATTGAAAACATATTTGTTTTTGGTAAACATGATTAACAAGGATGGTTGTTCTAGTGTTAAATGGATGCGAATAAACAATTATGCTGATTTTTTGGAAAACTGAAGATGTAGTGGATTGAAATTATTGGCAGATGTGGATAGGTTATGTGACAAGTTATATTTGCTGAAGTTTTTGAGTCGTGAGATTGAAATGTAATTGAGCTGTATATGTTCATTACAACACTGTCATTGTAATTTAATCAGTAATGATGATAGGTTACTAAACAGTGGGATGAATTAACTGCAATTATCTTTGTTATTGGTAGATGTCAATATGGAAAGATACCTATTTTGTGGGATTTCATTGGGTATGTTGTTGTATTGGCAGATATTTATTTGGTGTTGCTGCTTTGCGTTATTTGCCTCTTAATCTGATGTTTAGATGACAAAGTGATATTAATGTTTACTCAATCTAGATAACTAGAACATGTTTGCTGGAACAAGCTTATTGGTTGAGCTTGTGCAAGCCAGTTGCAATCCTTGTAGCTCTCCCTATGTCATTGTGCCAACTATTTTTTGTCATATTTCTATGAACTGCCCGTAATCCCTTCCTTTCCACTTAATACAGGTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATGGTACATCCTTGTCTTGACTGTGATTGCAGAAACTCATTTTTCATGCCCTAATTCAGTTTTTAGGTAGCTCTATCAGTTTGCTGTCAACCATTGGGCATTGGTTTTTTTCTTCTTCCAAATAGTCGTTAAAATGTTAGAAGGACTTGGATTTGATAACTCATTTCTCAATCATAATAGAGAAGAATATAAGAGGTGAACTTCCTATGAGAGTCTTTGGCCATAGATGTCATCTAGGCCAATTGAAGTGAGATACAGGAAATATAAGCCTATATTTAGTGTCACTTCATCTTTTTTGTCCTAACTAAATAGTTTTGTGTACTCCATACCTCAAGAAGTTATTTCAATGTAGGCACCTTTTTGGTTGCTTGGTTTGAAAGATTATCTTGCTCATATATTAACTGGCTAGAACTATGCCATTTCTCTCTTCTTTGTAACTAATGAATATTAGCAGGTGAAATTGCTCTGTTGGCTGATGTCTGTTCTTTTCTCAGGTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTG</genome_strand>
        <mrna_strand>GCAGCTTCACAAAATCGAAAATGGTTTCGTTGAAGCTCCATAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAAAACATCATGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAATAGGAAAGGCCGTCACTCTGGATATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGATGAGATTGAGAGTCCTCAAGCGTTTGCTTCGCACGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAAGCTAGAGAGAAAACCTTGTCCGACCAATTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E725732" ref_strand="+" ref_description="SGN-E725732 [LA05CA12]">
      <seq>gctaacaaaaacgaaaatggtttcggggggggtcccgaaccccattgccgctagtgtccggaagtgtggaagaggcaaagtttggcttgatcctaatgaaggcaatgaaatctccatggccaattcccgtcaaaacatcaggaaattggttaaggatggtttcatcatcaggaaaccaaccaaaattcactcgagatctcgtgctcgccgaatgaaggaggccaagaggaaaggccgtcactctggatatggtaagcgcaaaggtaccagggaggctagactgcctaccaaggtgctttggatgaggagattgagagtcctcaggcgtttgcttcgcaagtatagggaatcaaagaagattgacaaacacatgtatcatgacatgtacatgaaggtgaagggtaatgttttcaagaacaagcgtgtgctgatggaanatatccacaagacanaggctgagaaggctagagagaaaaccttgtccgacc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="65257" stop="62520"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64957" g_stop="64829" g_length="129"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="128" r_length="128" r_score="0.876"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64828" i_stop="63671" i_length="1158">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.955" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63670" g_stop="63548" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="129" r_stop="251" r_length="123" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63547" i_stop="63057" i_length="491">
            <donor d_prob="0.909" d_score="1.00"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="63056" g_stop="62820" g_length="237"/>
          <reference_exon_boundary r_type="cDNA" r_start="252" r_stop="488" r_length="237" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E725732" ref_strand="+">
        <total_alignment_score>0.963</total_alignment_score>
        <cumulative_length_of_scored_exons>489</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E725732" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64957" e_stop="64829"/>
          <exon e_start="63670" e_stop="63548"/>
          <exon e_start="63056" e_stop="62820"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTTCACAAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCCGTATGTTTCTGTTTTCTGTTTGTTATCAATATCTATTTACGTTTATGCTATCTCTTTTAATCTCTTGTTTGTATGTTATGGCTTCTGATTGTGAAAGATCTATAGTAGGTTTTGATCAGTTTAGCTCCAACGATGCTTAGGTTATGTTACTTTATCGTTTCGCCGTCTTTTCTTGTGTGGAGTGTTTAATTTTGGAATTTGATCAACCGTAGTGTTGTTTTAACCACATATACTCTGATGTCGACCAGTTCAGATCCATAGAAGCATTGATTATTTGTGTTGAGGTTTTAGGTTTGGATTTTGATCAAACATTACAATGTTTCAACTGAATATACTGTTGAGGTATATTTTTGTCGTAGAGTTTGATCAGTTAAGCTCCAGTGTACCATAGATTAATTTACTGTTACTATCAATTTGCCTTTTGTTAGAGTTGCTGTTTTGAATTTGATCAGTATACTCCTTATGCATTGTTCACAAGATTAGCAGCATACTAATGTTTTTTTATTTATGTCTACTGTGTCAGCTTAGAGTGATATTTTTTAGGTTTTTGCATTGAAAACATATTTGTTTTTGGTAAACATGATTAACAAGGATGGTTGTTCTAGTGTTAAATGGATGCGAATAAACAATTATGCTGATTTTTTGGAAAACTGAAGATGTAGTGGATTGAAATTATTGGCAGATGTGGATAGGTTATGTGACAAGTTATATTTGCTGAAGTTTTTGAGTCGTGAGATTGAAATGTAATTGAGCTGTATATGTTCATTACAACACTGTCATTGTAATTTAATCAGTAATGATGATAGGTTACTAAACAGTGGGATGAATTAACTGCAATTATCTTTGTTATTGGTAGATGTCAATATGGAAAGATACCTATTTTGTGGGATTTCATTGGGTATGTTGTTGTATTGGCAGATATTTATTTGGTGTTGCTGCTTTGCGTTATTTGCCTCTTAATCTGATGTTTAGATGACAAAGTGATATTAATGTTTACTCAATCTAGATAACTAGAACATGTTTGCTGGAACAAGCTTATTGGTTGAGCTTGTGCAAGCCAGTTGCAATCCTTGTAGCTCTCCCTATGTCATTGTGCCAACTATTTTTTGTCATATTTCTATGAACTGCCCGTAATCCCTTCCTTTCCACTTAATACAGGTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATGGTACATCCTTGTCTTGACTGTGATTGCAGAAACTCATTTTTCATGCCCTAATTCAGTTTTTAGGTAGCTCTATCAGTTTGCTGTCAACCATTGGGCATTGGTTTTTTTCTTCTTCCAAATAGTCGTTAAAATGTTAGAAGGACTTGGATTTGATAACTCATTTCTCAATCATAATAGAGAAGAATATAAGAGGTGAACTTCCTATGAGAGTCTTTGGCCATAGATGTCATCTAGGCCAATTGAAGTGAGATACAGGAAATATAAGCCTATATTTAGTGTCACTTCATCTTTTTTGTCCTAACTAAATAGTTTTGTGTACTCCATACCTCAAGAAGTTATTTCAATGTAGGCACCTTTTTGGTTGCTTGGTTTGAAAGATTATCTTGCTCATATATTAACTGGCTAGAACTATGCCATTTCTCTCTTCTTTGTAACTAATGAATATTAGCAGGTGAAATTGCTCTGTTGGCTGATGTCTGTTCTTTTCTCAGGTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACC</genome_strand>
        <mrna_strand>GC-TAACAAAAACGAAAATGGTTTCGGGGGGGGTCCCGAACCCCATTGCCGCTAGTGTCCGGAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAANATATCCACAAGACANAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E563339" ref_strand="+" ref_description="SGN-E563339 [1780]">
      <seq>gcttcacaaaatcgaaaatggtttcgttgaagctccagaagcggctcgccgctagtgtcctcaagtgtggaagaggaaaagtttggcttgatcctaatgaagggaatgaaatctccatggccaattcccgtcaaaacatcaggaaattggttaaggatggtttcatcatcaggaaaccaaccaaaattcactcaagatctcgtgctcgcagaatgaaggaggccaagaggaaaggccgtcactctggatatggtaagcgcaaaggtaccnagggaggctaactgcctaccaaggtgctttggatgagagattgagagtcctcaggcgtttgcttcgcaagtatagggaatcaaagaagattgacaaacacatgtatcatgacatgtacatgaaggtgaagggtaatgttttcaagaacaagcgtgtgctgatggaaaatatccacaagacaaaggctgagaaagctaagagagaagacccttggtccgac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="65257" stop="62521"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64957" g_stop="64829" g_length="129"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="129" r_length="129" r_score="0.984"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64828" i_stop="63671" i_length="1158">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.955" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63670" g_stop="63548" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="130" r_stop="252" r_length="123" r_score="0.984"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63547" i_stop="63057" i_length="491">
            <donor d_prob="0.909" d_score="0.98"/>
            <acceptor a_prob="0.975" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="63056" g_stop="62821" g_length="236"/>
          <reference_exon_boundary r_type="cDNA" r_start="253" r_stop="490" r_length="238" r_score="0.949"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E563339" ref_strand="+">
        <total_alignment_score>0.967</total_alignment_score>
        <cumulative_length_of_scored_exons>488</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E563339" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64957" e_stop="64829"/>
          <exon e_start="63670" e_stop="63548"/>
          <exon e_start="63056" e_stop="62821"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTTCACAAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCCGTATGTTTCTGTTTTCTGTTTGTTATCAATATCTATTTACGTTTATGCTATCTCTTTTAATCTCTTGTTTGTATGTTATGGCTTCTGATTGTGAAAGATCTATAGTAGGTTTTGATCAGTTTAGCTCCAACGATGCTTAGGTTATGTTACTTTATCGTTTCGCCGTCTTTTCTTGTGTGGAGTGTTTAATTTTGGAATTTGATCAACCGTAGTGTTGTTTTAACCACATATACTCTGATGTCGACCAGTTCAGATCCATAGAAGCATTGATTATTTGTGTTGAGGTTTTAGGTTTGGATTTTGATCAAACATTACAATGTTTCAACTGAATATACTGTTGAGGTATATTTTTGTCGTAGAGTTTGATCAGTTAAGCTCCAGTGTACCATAGATTAATTTACTGTTACTATCAATTTGCCTTTTGTTAGAGTTGCTGTTTTGAATTTGATCAGTATACTCCTTATGCATTGTTCACAAGATTAGCAGCATACTAATGTTTTTTTATTTATGTCTACTGTGTCAGCTTAGAGTGATATTTTTTAGGTTTTTGCATTGAAAACATATTTGTTTTTGGTAAACATGATTAACAAGGATGGTTGTTCTAGTGTTAAATGGATGCGAATAAACAATTATGCTGATTTTTTGGAAAACTGAAGATGTAGTGGATTGAAATTATTGGCAGATGTGGATAGGTTATGTGACAAGTTATATTTGCTGAAGTTTTTGAGTCGTGAGATTGAAATGTAATTGAGCTGTATATGTTCATTACAACACTGTCATTGTAATTTAATCAGTAATGATGATAGGTTACTAAACAGTGGGATGAATTAACTGCAATTATCTTTGTTATTGGTAGATGTCAATATGGAAAGATACCTATTTTGTGGGATTTCATTGGGTATGTTGTTGTATTGGCAGATATTTATTTGGTGTTGCTGCTTTGCGTTATTTGCCTCTTAATCTGATGTTTAGATGACAAAGTGATATTAATGTTTACTCAATCTAGATAACTAGAACATGTTTGCTGGAACAAGCTTATTGGTTGAGCTTGTGCAAGCCAGTTGCAATCCTTGTAGCTCTCCCTATGTCATTGTGCCAACTATTTTTTGTCATATTTCTATGAACTGCCCGTAATCCCTTCCTTTCCACTTAATACAGGTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATGGTACATCCTTGTCTTGACTGTGATTGCAGAAACTCATTTTTCATGCCCTAATTCAGTTTTTAGGTAGCTCTATCAGTTTGCTGTCAACCATTGGGCATTGGTTTTTTTCTTCTTCCAAATAGTCGTTAAAATGTTAGAAGGACTTGGATTTGATAACTCATTTCTCAATCATAATAGAGAAGAATATAAGAGGTGAACTTCCTATGAGAGTCTTTGGCCATAGATGTCATCTAGGCCAATTGAAGTGAGATACAGGAAATATAAGCCTATATTTAGTGTCACTTCATCTTTTTTGTCCTAACTAAATAGTTTTGTGTACTCCATACCTCAAGAAGTTATTTCAATGTAGGCACCTTTTTGGTTGCTTGGTTTGAAAGATTATCTTGCTCATATATTAACTGGCTAGAACTATGCCATTTCTCTCTTCTTTGTAACTAATGAATATTAGCAGGTGAAATTGCTCTGTTGGCTGATGTCTGTTCTTTTCTCAGGTAAGCGCAAAGGTACC-AGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCT-AGAGAGAA-AACCTT-GTCCGAC</genome_strand>
        <mrna_strand>GCTTCACAAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGAAAAGTTTGGCTTGATCCTAATGAAGGGAATGAAATCTCCATGGCCAATTCCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCAAGATCTCGTGCTCGCAGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGCGCAAAGGTACCNAGGGAGGCTA-ACTGCCTACCAAGGTGCTTTGGATGA-GAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAAGCTAAGAGAGAAGACCCTTGGTCCGAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E442205" ref_strand="+" ref_description="SGN-E442205 [cSTA-32-G10]">
      <seq>aaagccggctcgccgctagtgtcctcaagtgtggaagaggaaaagtttggcttgatcctaatgaagggaatgaaatctccatggccaattcccgtcaaaacatcaggaaattggttaaggatggtttcatcatcaggaaaccaaccaaaattcactcaagatctcgtgctcgcagaatgaaggaggccaagaggaaaggccgtcactctggatatggtaagcgcaaaggtaccagggaggctagactgcctaccaaggtgctttggatgaggagattgagagtcctcaggcgtttgcttcgcaagtatagggaatcaaagaagattgacaaacacatgtatcatgacatgtacatgaaggtgaagggtaatgttttcaagaacaagcgtgtgctgatggaaaatatccacaagacaaaggctgagaaagctagagagaagaccttgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="65219" stop="62526"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64921" g_stop="64829" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="93" r_length="93" r_score="0.946"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64828" i_stop="63671" i_length="1158">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.955" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63670" g_stop="63548" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="94" r_stop="216" r_length="123" r_score="0.984"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63547" i_stop="63057" i_length="491">
            <donor d_prob="0.909" d_score="0.98"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="63056" g_stop="62826" g_length="231"/>
          <reference_exon_boundary r_type="cDNA" r_start="217" r_stop="447" r_length="231" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E442205" ref_strand="+">
        <total_alignment_score>0.980</total_alignment_score>
        <cumulative_length_of_scored_exons>447</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E442205" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64921" e_stop="64829"/>
          <exon e_start="63670" e_stop="63548"/>
          <exon e_start="63056" e_stop="62826"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCCGTATGTTTCTGTTTTCTGTTTGTTATCAATATCTATTTACGTTTATGCTATCTCTTTTAATCTCTTGTTTGTATGTTATGGCTTCTGATTGTGAAAGATCTATAGTAGGTTTTGATCAGTTTAGCTCCAACGATGCTTAGGTTATGTTACTTTATCGTTTCGCCGTCTTTTCTTGTGTGGAGTGTTTAATTTTGGAATTTGATCAACCGTAGTGTTGTTTTAACCACATATACTCTGATGTCGACCAGTTCAGATCCATAGAAGCATTGATTATTTGTGTTGAGGTTTTAGGTTTGGATTTTGATCAAACATTACAATGTTTCAACTGAATATACTGTTGAGGTATATTTTTGTCGTAGAGTTTGATCAGTTAAGCTCCAGTGTACCATAGATTAATTTACTGTTACTATCAATTTGCCTTTTGTTAGAGTTGCTGTTTTGAATTTGATCAGTATACTCCTTATGCATTGTTCACAAGATTAGCAGCATACTAATGTTTTTTTATTTATGTCTACTGTGTCAGCTTAGAGTGATATTTTTTAGGTTTTTGCATTGAAAACATATTTGTTTTTGGTAAACATGATTAACAAGGATGGTTGTTCTAGTGTTAAATGGATGCGAATAAACAATTATGCTGATTTTTTGGAAAACTGAAGATGTAGTGGATTGAAATTATTGGCAGATGTGGATAGGTTATGTGACAAGTTATATTTGCTGAAGTTTTTGAGTCGTGAGATTGAAATGTAATTGAGCTGTATATGTTCATTACAACACTGTCATTGTAATTTAATCAGTAATGATGATAGGTTACTAAACAGTGGGATGAATTAACTGCAATTATCTTTGTTATTGGTAGATGTCAATATGGAAAGATACCTATTTTGTGGGATTTCATTGGGTATGTTGTTGTATTGGCAGATATTTATTTGGTGTTGCTGCTTTGCGTTATTTGCCTCTTAATCTGATGTTTAGATGACAAAGTGATATTAATGTTTACTCAATCTAGATAACTAGAACATGTTTGCTGGAACAAGCTTATTGGTTGAGCTTGTGCAAGCCAGTTGCAATCCTTGTAGCTCTCCCTATGTCATTGTGCCAACTATTTTTTGTCATATTTCTATGAACTGCCCGTAATCCCTTCCTTTCCACTTAATACAGGTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATGGTACATCCTTGTCTTGACTGTGATTGCAGAAACTCATTTTTCATGCCCTAATTCAGTTTTTAGGTAGCTCTATCAGTTTGCTGTCAACCATTGGGCATTGGTTTTTTTCTTCTTCCAAATAGTCGTTAAAATGTTAGAAGGACTTGGATTTGATAACTCATTTCTCAATCATAATAGAGAAGAATATAAGAGGTGAACTTCCTATGAGAGTCTTTGGCCATAGATGTCATCTAGGCCAATTGAAGTGAGATACAGGAAATATAAGCCTATATTTAGTGTCACTTCATCTTTTTTGTCCTAACTAAATAGTTTTGTGTACTCCATACCTCAAGAAGTTATTTCAATGTAGGCACCTTTTTGGTTGCTTGGTTTGAAAGATTATCTTGCTCATATATTAACTGGCTAGAACTATGCCATTTCTCTCTTCTTTGTAACTAATGAATATTAGCAGGTGAAATTGCTCTGTTGGCTGATGTCTGTTCTTTTCTCAGGTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGT</genome_strand>
        <mrna_strand>AAAGCCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGAAAAGTTTGGCTTGATCCTAATGAAGGGAATGAAATCTCCATGGCCAATTCCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCAAGATCTCGTGCTCGCAGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAAGCTAGAGAGAAGACCTTGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E287282" ref_strand="+" ref_description="SGN-E287282 [cLES-15-C10]">
      <seq>aaaatcgaaaatggtttcgttgaagctccagaagcggctcgccgctagtgtcctcaagtgtggaagaggcaaagtttggcttgatcctaatgaaggcaatgaaatctccatggccaattcccgtcaaaacatcaggaaattggttaaggatggtttcatcatcaggaaaccaaccaaaattcactcgagatctcgtgctcgccgaatgaaggaggccaagaggaaaggccgtcactctggatatggtaagcgcaaaggtaccagggaggctagactgcctaccaaggtgctttggatgaggagattgagagtcctcaggcgtttgcttcgcaagtatagggaatcaaagaagattgacaaacacatgtatcatgacatgtacatgaaggtgaagggtaatgttttcaagaacaagcgtgtgctgatggaaaatatccacaagacaaaggctgagaaggctagagagaaaacctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="65250" stop="62528"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64950" g_stop="64829" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="122" r_length="122" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64828" i_stop="63671" i_length="1158">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.955" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63670" g_stop="63548" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="123" r_stop="245" r_length="123" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63547" i_stop="63057" i_length="491">
            <donor d_prob="0.909" d_score="1.00"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="63056" g_stop="62828" g_length="229"/>
          <reference_exon_boundary r_type="cDNA" r_start="246" r_stop="474" r_length="229" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E287282" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>474</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E287282" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64950" e_stop="64829"/>
          <exon e_start="63670" e_stop="63548"/>
          <exon e_start="63056" e_stop="62828"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCCGTATGTTTCTGTTTTCTGTTTGTTATCAATATCTATTTACGTTTATGCTATCTCTTTTAATCTCTTGTTTGTATGTTATGGCTTCTGATTGTGAAAGATCTATAGTAGGTTTTGATCAGTTTAGCTCCAACGATGCTTAGGTTATGTTACTTTATCGTTTCGCCGTCTTTTCTTGTGTGGAGTGTTTAATTTTGGAATTTGATCAACCGTAGTGTTGTTTTAACCACATATACTCTGATGTCGACCAGTTCAGATCCATAGAAGCATTGATTATTTGTGTTGAGGTTTTAGGTTTGGATTTTGATCAAACATTACAATGTTTCAACTGAATATACTGTTGAGGTATATTTTTGTCGTAGAGTTTGATCAGTTAAGCTCCAGTGTACCATAGATTAATTTACTGTTACTATCAATTTGCCTTTTGTTAGAGTTGCTGTTTTGAATTTGATCAGTATACTCCTTATGCATTGTTCACAAGATTAGCAGCATACTAATGTTTTTTTATTTATGTCTACTGTGTCAGCTTAGAGTGATATTTTTTAGGTTTTTGCATTGAAAACATATTTGTTTTTGGTAAACATGATTAACAAGGATGGTTGTTCTAGTGTTAAATGGATGCGAATAAACAATTATGCTGATTTTTTGGAAAACTGAAGATGTAGTGGATTGAAATTATTGGCAGATGTGGATAGGTTATGTGACAAGTTATATTTGCTGAAGTTTTTGAGTCGTGAGATTGAAATGTAATTGAGCTGTATATGTTCATTACAACACTGTCATTGTAATTTAATCAGTAATGATGATAGGTTACTAAACAGTGGGATGAATTAACTGCAATTATCTTTGTTATTGGTAGATGTCAATATGGAAAGATACCTATTTTGTGGGATTTCATTGGGTATGTTGTTGTATTGGCAGATATTTATTTGGTGTTGCTGCTTTGCGTTATTTGCCTCTTAATCTGATGTTTAGATGACAAAGTGATATTAATGTTTACTCAATCTAGATAACTAGAACATGTTTGCTGGAACAAGCTTATTGGTTGAGCTTGTGCAAGCCAGTTGCAATCCTTGTAGCTCTCCCTATGTCATTGTGCCAACTATTTTTTGTCATATTTCTATGAACTGCCCGTAATCCCTTCCTTTCCACTTAATACAGGTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATGGTACATCCTTGTCTTGACTGTGATTGCAGAAACTCATTTTTCATGCCCTAATTCAGTTTTTAGGTAGCTCTATCAGTTTGCTGTCAACCATTGGGCATTGGTTTTTTTCTTCTTCCAAATAGTCGTTAAAATGTTAGAAGGACTTGGATTTGATAACTCATTTCTCAATCATAATAGAGAAGAATATAAGAGGTGAACTTCCTATGAGAGTCTTTGGCCATAGATGTCATCTAGGCCAATTGAAGTGAGATACAGGAAATATAAGCCTATATTTAGTGTCACTTCATCTTTTTTGTCCTAACTAAATAGTTTTGTGTACTCCATACCTCAAGAAGTTATTTCAATGTAGGCACCTTTTTGGTTGCTTGGTTTGAAAGATTATCTTGCTCATATATTAACTGGCTAGAACTATGCCATTTCTCTCTTCTTTGTAACTAATGAATATTAGCAGGTGAAATTGCTCTGTTGGCTGATGTCTGTTCTTTTCTCAGGTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTT</genome_strand>
        <mrna_strand>AAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E295680" ref_strand="+" ref_description="SGN-E295680 [cLET-25-D4]">
      <seq>agcttcacaaaatcgaaaatggtttcgttgaagctccagaagcggctcgccgctagtgtcctcaagtgtggaagaggcaaagtttggcttgatcctaatgaaggcaatgaaatctccatggccaattcccgtcaaaacatcaggaaattggttaaggatggtttcatcatcaggaaaccaaccaaaattcactcgagatctcgtgctcgccgaatgaaggaggccaagaggaaaggccgtcactctggatatggtaagcgcaaaggtaccagggaggctagactgcctaccaaggtgctttggatgaggagattgagagtcctcaggcgtttgcttcgcaagtatagggaatcaaagaagattgacaaacacatgtatcatgacatgtacatgaaggtgaagggtaatgttttcaagaacaagcgtgtgctgatggaaaatatccacaagacaaaggctgagaaggctagagagaaaacc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="65258" stop="62530"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64958" g_stop="64829" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="130" r_length="130" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64828" i_stop="63671" i_length="1158">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.955" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63670" g_stop="63548" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="131" r_stop="253" r_length="123" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63547" i_stop="63057" i_length="491">
            <donor d_prob="0.909" d_score="1.00"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="63056" g_stop="62830" g_length="227"/>
          <reference_exon_boundary r_type="cDNA" r_start="254" r_stop="480" r_length="227" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E295680" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>480</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E295680" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64958" e_stop="64829"/>
          <exon e_start="63670" e_stop="63548"/>
          <exon e_start="63056" e_stop="62830"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGCTTCACAAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCCGTATGTTTCTGTTTTCTGTTTGTTATCAATATCTATTTACGTTTATGCTATCTCTTTTAATCTCTTGTTTGTATGTTATGGCTTCTGATTGTGAAAGATCTATAGTAGGTTTTGATCAGTTTAGCTCCAACGATGCTTAGGTTATGTTACTTTATCGTTTCGCCGTCTTTTCTTGTGTGGAGTGTTTAATTTTGGAATTTGATCAACCGTAGTGTTGTTTTAACCACATATACTCTGATGTCGACCAGTTCAGATCCATAGAAGCATTGATTATTTGTGTTGAGGTTTTAGGTTTGGATTTTGATCAAACATTACAATGTTTCAACTGAATATACTGTTGAGGTATATTTTTGTCGTAGAGTTTGATCAGTTAAGCTCCAGTGTACCATAGATTAATTTACTGTTACTATCAATTTGCCTTTTGTTAGAGTTGCTGTTTTGAATTTGATCAGTATACTCCTTATGCATTGTTCACAAGATTAGCAGCATACTAATGTTTTTTTATTTATGTCTACTGTGTCAGCTTAGAGTGATATTTTTTAGGTTTTTGCATTGAAAACATATTTGTTTTTGGTAAACATGATTAACAAGGATGGTTGTTCTAGTGTTAAATGGATGCGAATAAACAATTATGCTGATTTTTTGGAAAACTGAAGATGTAGTGGATTGAAATTATTGGCAGATGTGGATAGGTTATGTGACAAGTTATATTTGCTGAAGTTTTTGAGTCGTGAGATTGAAATGTAATTGAGCTGTATATGTTCATTACAACACTGTCATTGTAATTTAATCAGTAATGATGATAGGTTACTAAACAGTGGGATGAATTAACTGCAATTATCTTTGTTATTGGTAGATGTCAATATGGAAAGATACCTATTTTGTGGGATTTCATTGGGTATGTTGTTGTATTGGCAGATATTTATTTGGTGTTGCTGCTTTGCGTTATTTGCCTCTTAATCTGATGTTTAGATGACAAAGTGATATTAATGTTTACTCAATCTAGATAACTAGAACATGTTTGCTGGAACAAGCTTATTGGTTGAGCTTGTGCAAGCCAGTTGCAATCCTTGTAGCTCTCCCTATGTCATTGTGCCAACTATTTTTTGTCATATTTCTATGAACTGCCCGTAATCCCTTCCTTTCCACTTAATACAGGTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATGGTACATCCTTGTCTTGACTGTGATTGCAGAAACTCATTTTTCATGCCCTAATTCAGTTTTTAGGTAGCTCTATCAGTTTGCTGTCAACCATTGGGCATTGGTTTTTTTCTTCTTCCAAATAGTCGTTAAAATGTTAGAAGGACTTGGATTTGATAACTCATTTCTCAATCATAATAGAGAAGAATATAAGAGGTGAACTTCCTATGAGAGTCTTTGGCCATAGATGTCATCTAGGCCAATTGAAGTGAGATACAGGAAATATAAGCCTATATTTAGTGTCACTTCATCTTTTTTGTCCTAACTAAATAGTTTTGTGTACTCCATACCTCAAGAAGTTATTTCAATGTAGGCACCTTTTTGGTTGCTTGGTTTGAAAGATTATCTTGCTCATATATTAACTGGCTAGAACTATGCCATTTCTCTCTTCTTTGTAACTAATGAATATTAGCAGGTGAAATTGCTCTGTTGGCTGATGTCTGTTCTTTTCTCAGGTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACC</genome_strand>
        <mrna_strand>AGCTTCACAAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E725457" ref_strand="+" ref_description="SGN-E725457 [LA03CA12]">
      <seq>gcttcacaaaatcgaaaatggtttcgttgaagctccagaagcggctcgccgccagtgtcctcaagtgtggaagaggcaaagtttggcttgatcctaatgaaggcaatgaaatctccatggccaattcccgtcaaaacatcaggaaattggttaaggatggtttcatcatcaggaaaccaaccaaaattcacttcgagagctcgtgctcgccgaatgaaggaggccaagaggaaaggccgtcactctggatatggtaagcgcaaaggtaccagggaggctagactgcctaccaaggtgctttggatgaggagattgagagtcctcaggcgtttgcttcgcaagtatagggaatcaaagaagattgacaaacacatgtatcatgacatgtacatgaaggtgaagggtaatgttttcaaaacaagcgtgtgctgatggaaatatccacaagacaaggctgagaggct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="65257" stop="62542"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64957" g_stop="64829" g_length="129"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="129" r_length="129" r_score="0.992"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64828" i_stop="63671" i_length="1158">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.955" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63670" g_stop="63548" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="130" r_stop="253" r_length="124" r_score="0.976"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63547" i_stop="63057" i_length="491">
            <donor d_prob="0.909" d_score="1.00"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="63056" g_stop="62848" g_length="209"/>
          <reference_exon_boundary r_type="cDNA" r_start="254" r_stop="459" r_length="206" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E725457" ref_strand="+">
        <total_alignment_score>0.985</total_alignment_score>
        <cumulative_length_of_scored_exons>461</cumulative_length_of_scored_exons>
        <coverage percentage="0.994" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E725457" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64957" e_stop="64829"/>
          <exon e_start="63670" e_stop="63548"/>
          <exon e_start="63056" e_stop="62848"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTTCACAAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCCGTATGTTTCTGTTTTCTGTTTGTTATCAATATCTATTTACGTTTATGCTATCTCTTTTAATCTCTTGTTTGTATGTTATGGCTTCTGATTGTGAAAGATCTATAGTAGGTTTTGATCAGTTTAGCTCCAACGATGCTTAGGTTATGTTACTTTATCGTTTCGCCGTCTTTTCTTGTGTGGAGTGTTTAATTTTGGAATTTGATCAACCGTAGTGTTGTTTTAACCACATATACTCTGATGTCGACCAGTTCAGATCCATAGAAGCATTGATTATTTGTGTTGAGGTTTTAGGTTTGGATTTTGATCAAACATTACAATGTTTCAACTGAATATACTGTTGAGGTATATTTTTGTCGTAGAGTTTGATCAGTTAAGCTCCAGTGTACCATAGATTAATTTACTGTTACTATCAATTTGCCTTTTGTTAGAGTTGCTGTTTTGAATTTGATCAGTATACTCCTTATGCATTGTTCACAAGATTAGCAGCATACTAATGTTTTTTTATTTATGTCTACTGTGTCAGCTTAGAGTGATATTTTTTAGGTTTTTGCATTGAAAACATATTTGTTTTTGGTAAACATGATTAACAAGGATGGTTGTTCTAGTGTTAAATGGATGCGAATAAACAATTATGCTGATTTTTTGGAAAACTGAAGATGTAGTGGATTGAAATTATTGGCAGATGTGGATAGGTTATGTGACAAGTTATATTTGCTGAAGTTTTTGAGTCGTGAGATTGAAATGTAATTGAGCTGTATATGTTCATTACAACACTGTCATTGTAATTTAATCAGTAATGATGATAGGTTACTAAACAGTGGGATGAATTAACTGCAATTATCTTTGTTATTGGTAGATGTCAATATGGAAAGATACCTATTTTGTGGGATTTCATTGGGTATGTTGTTGTATTGGCAGATATTTATTTGGTGTTGCTGCTTTGCGTTATTTGCCTCTTAATCTGATGTTTAGATGACAAAGTGATATTAATGTTTACTCAATCTAGATAACTAGAACATGTTTGCTGGAACAAGCTTATTGGTTGAGCTTGTGCAAGCCAGTTGCAATCCTTGTAGCTCTCCCTATGTCATTGTGCCAACTATTTTTTGTCATATTTCTATGAACTGCCCGTAATCCCTTCCTTTCCACTTAATACAGGTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCAC-TCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATGGTACATCCTTGTCTTGACTGTGATTGCAGAAACTCATTTTTCATGCCCTAATTCAGTTTTTAGGTAGCTCTATCAGTTTGCTGTCAACCATTGGGCATTGGTTTTTTTCTTCTTCCAAATAGTCGTTAAAATGTTAGAAGGACTTGGATTTGATAACTCATTTCTCAATCATAATAGAGAAGAATATAAGAGGTGAACTTCCTATGAGAGTCTTTGGCCATAGATGTCATCTAGGCCAATTGAAGTGAGATACAGGAAATATAAGCCTATATTTAGTGTCACTTCATCTTTTTTGTCCTAACTAAATAGTTTTGTGTACTCCATACCTCAAGAAGTTATTTCAATGTAGGCACCTTTTTGGTTGCTTGGTTTGAAAGATTATCTTGCTCATATATTAACTGGCTAGAACTATGCCATTTCTCTCTTCTTTGTAACTAATGAATATTAGCAGGTGAAATTGCTCTGTTGGCTGATGTCTGTTCTTTTCTCAGGTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAG</genome_strand>
        <mrna_strand>GCTTCACAAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCCAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTTCGAGAGCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAA-AACAAGCGTGTGCTGATGG-AAATATCCACAAGAC-AAGGCTGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E569218" ref_strand="+" ref_description="SGN-E569218 [13624]">
      <seq>acaaaatcgaaaatggtttcgttgaagctccagaagcggctcgccgctagtgtcctcaagtgtggaagaggcaaagtttggcttgatcctaatgaggggaatgaaatctccatggccaattcccgccaaaacatcaggaaattggtgaaggatggtttcatcatcaggaaaccaaccaaaattcactcaagatctcgtgctcgcagaatgaaggaggccaagaggaaaggccgtcactctggatatggtaagcgcaaaggtaccaggcgaggctagactgtctaccaaggtgctttggatgaggagattgagagtcctcaggcgtttgcttcgcaagtatagggaatcaaagaagattgaccaaacacatgtatcatgacatgtacatgaaggtgaagggtaatgttttcaaggaacaagcgtgtgctgatggaaaatatccacaagacaaaggctgag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="65252" stop="62548"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64952" g_stop="64829" g_length="124"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="124" r_length="124" r_score="0.984"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64828" i_stop="63671" i_length="1158">
            <donor d_prob="0.998" d_score="0.96"/>
            <acceptor a_prob="0.955" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63670" g_stop="63548" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="125" r_stop="247" r_length="123" r_score="0.967"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63547" i_stop="63057" i_length="491">
            <donor d_prob="0.909" d_score="0.98"/>
            <acceptor a_prob="0.975" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="63056" g_stop="62848" g_length="209"/>
          <reference_exon_boundary r_type="cDNA" r_start="248" r_stop="459" r_length="212" r_score="0.967"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E569218" ref_strand="+">
        <total_alignment_score>0.971</total_alignment_score>
        <cumulative_length_of_scored_exons>456</cumulative_length_of_scored_exons>
        <coverage percentage="0.993" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E569218" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64952" e_stop="64829"/>
          <exon e_start="63670" e_stop="63548"/>
          <exon e_start="63056" e_stop="62848"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACAAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCCGTATGTTTCTGTTTTCTGTTTGTTATCAATATCTATTTACGTTTATGCTATCTCTTTTAATCTCTTGTTTGTATGTTATGGCTTCTGATTGTGAAAGATCTATAGTAGGTTTTGATCAGTTTAGCTCCAACGATGCTTAGGTTATGTTACTTTATCGTTTCGCCGTCTTTTCTTGTGTGGAGTGTTTAATTTTGGAATTTGATCAACCGTAGTGTTGTTTTAACCACATATACTCTGATGTCGACCAGTTCAGATCCATAGAAGCATTGATTATTTGTGTTGAGGTTTTAGGTTTGGATTTTGATCAAACATTACAATGTTTCAACTGAATATACTGTTGAGGTATATTTTTGTCGTAGAGTTTGATCAGTTAAGCTCCAGTGTACCATAGATTAATTTACTGTTACTATCAATTTGCCTTTTGTTAGAGTTGCTGTTTTGAATTTGATCAGTATACTCCTTATGCATTGTTCACAAGATTAGCAGCATACTAATGTTTTTTTATTTATGTCTACTGTGTCAGCTTAGAGTGATATTTTTTAGGTTTTTGCATTGAAAACATATTTGTTTTTGGTAAACATGATTAACAAGGATGGTTGTTCTAGTGTTAAATGGATGCGAATAAACAATTATGCTGATTTTTTGGAAAACTGAAGATGTAGTGGATTGAAATTATTGGCAGATGTGGATAGGTTATGTGACAAGTTATATTTGCTGAAGTTTTTGAGTCGTGAGATTGAAATGTAATTGAGCTGTATATGTTCATTACAACACTGTCATTGTAATTTAATCAGTAATGATGATAGGTTACTAAACAGTGGGATGAATTAACTGCAATTATCTTTGTTATTGGTAGATGTCAATATGGAAAGATACCTATTTTGTGGGATTTCATTGGGTATGTTGTTGTATTGGCAGATATTTATTTGGTGTTGCTGCTTTGCGTTATTTGCCTCTTAATCTGATGTTTAGATGACAAAGTGATATTAATGTTTACTCAATCTAGATAACTAGAACATGTTTGCTGGAACAAGCTTATTGGTTGAGCTTGTGCAAGCCAGTTGCAATCCTTGTAGCTCTCCCTATGTCATTGTGCCAACTATTTTTTGTCATATTTCTATGAACTGCCCGTAATCCCTTCCTTTCCACTTAATACAGGTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATGGTACATCCTTGTCTTGACTGTGATTGCAGAAACTCATTTTTCATGCCCTAATTCAGTTTTTAGGTAGCTCTATCAGTTTGCTGTCAACCATTGGGCATTGGTTTTTTTCTTCTTCCAAATAGTCGTTAAAATGTTAGAAGGACTTGGATTTGATAACTCATTTCTCAATCATAATAGAGAAGAATATAAGAGGTGAACTTCCTATGAGAGTCTTTGGCCATAGATGTCATCTAGGCCAATTGAAGTGAGATACAGGAAATATAAGCCTATATTTAGTGTCACTTCATCTTTTTTGTCCTAACTAAATAGTTTTGTGTACTCCATACCTCAAGAAGTTATTTCAATGTAGGCACCTTTTTGGTTGCTTGGTTTGAAAGATTATCTTGCTCATATATTAACTGGCTAGAACTATGCCATTTCTCTCTTCTTTGTAACTAATGAATATTAGCAGGTGAAATTGCTCTGTTGGCTGATGTCTGTTCTTTTCTCAGGTAAGCGCAAAGGTACCAGG-GAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGA-CAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAA-GAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAG</genome_strand>
        <mrna_strand>ACAAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAGGGGAATGAAATCTCCATGGCCAATTCCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCAAAACATCAGGAAATTGGTGAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCAAGATCTCGTGCTCGCAGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGCGCAAAGGTACCAGGCGAGGCTAGACTGTCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACCAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E277509" ref_strand="+" ref_description="SGN-E277509 [cLER-3-H11]">
      <seq>aaaatcgaaaatggtttcgttgaagctccagaagcggctcgccgctagtgtcctcaagtgtggaagaggcaaagtttggcttgatcctaatgaaggcaatgaaatctccatggccaattcccgtcaaaacatcaggaaattggttaaggatggtttcatcatcaggaaaccaaccaaaattcactcgagatctcgtgctcgccgaatgaaggaggccaagaggaaaggccgtcactctggatatggtaagcgcaaaggtaccagggaggctagactgcctaccaaggtgctttggatgaggagattgagagtcctcaggcgtttgcttcgcaagtatagggaatcaaagaagattgacaaacacatgtatcatgacatgtacatgaaggtgaagggtaatgttttcaagaacaagcgtgtgctgatggaaaatatccacaagacaaaggctgag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="65250" stop="62548"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64950" g_stop="64829" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="122" r_length="122" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64828" i_stop="63671" i_length="1158">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.955" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63670" g_stop="63548" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="123" r_stop="245" r_length="123" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63547" i_stop="63057" i_length="491">
            <donor d_prob="0.909" d_score="1.00"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="63056" g_stop="62848" g_length="209"/>
          <reference_exon_boundary r_type="cDNA" r_start="246" r_stop="454" r_length="209" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E277509" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>454</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E277509" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64950" e_stop="64829"/>
          <exon e_start="63670" e_stop="63548"/>
          <exon e_start="63056" e_stop="62848"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCCGTATGTTTCTGTTTTCTGTTTGTTATCAATATCTATTTACGTTTATGCTATCTCTTTTAATCTCTTGTTTGTATGTTATGGCTTCTGATTGTGAAAGATCTATAGTAGGTTTTGATCAGTTTAGCTCCAACGATGCTTAGGTTATGTTACTTTATCGTTTCGCCGTCTTTTCTTGTGTGGAGTGTTTAATTTTGGAATTTGATCAACCGTAGTGTTGTTTTAACCACATATACTCTGATGTCGACCAGTTCAGATCCATAGAAGCATTGATTATTTGTGTTGAGGTTTTAGGTTTGGATTTTGATCAAACATTACAATGTTTCAACTGAATATACTGTTGAGGTATATTTTTGTCGTAGAGTTTGATCAGTTAAGCTCCAGTGTACCATAGATTAATTTACTGTTACTATCAATTTGCCTTTTGTTAGAGTTGCTGTTTTGAATTTGATCAGTATACTCCTTATGCATTGTTCACAAGATTAGCAGCATACTAATGTTTTTTTATTTATGTCTACTGTGTCAGCTTAGAGTGATATTTTTTAGGTTTTTGCATTGAAAACATATTTGTTTTTGGTAAACATGATTAACAAGGATGGTTGTTCTAGTGTTAAATGGATGCGAATAAACAATTATGCTGATTTTTTGGAAAACTGAAGATGTAGTGGATTGAAATTATTGGCAGATGTGGATAGGTTATGTGACAAGTTATATTTGCTGAAGTTTTTGAGTCGTGAGATTGAAATGTAATTGAGCTGTATATGTTCATTACAACACTGTCATTGTAATTTAATCAGTAATGATGATAGGTTACTAAACAGTGGGATGAATTAACTGCAATTATCTTTGTTATTGGTAGATGTCAATATGGAAAGATACCTATTTTGTGGGATTTCATTGGGTATGTTGTTGTATTGGCAGATATTTATTTGGTGTTGCTGCTTTGCGTTATTTGCCTCTTAATCTGATGTTTAGATGACAAAGTGATATTAATGTTTACTCAATCTAGATAACTAGAACATGTTTGCTGGAACAAGCTTATTGGTTGAGCTTGTGCAAGCCAGTTGCAATCCTTGTAGCTCTCCCTATGTCATTGTGCCAACTATTTTTTGTCATATTTCTATGAACTGCCCGTAATCCCTTCCTTTCCACTTAATACAGGTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATGGTACATCCTTGTCTTGACTGTGATTGCAGAAACTCATTTTTCATGCCCTAATTCAGTTTTTAGGTAGCTCTATCAGTTTGCTGTCAACCATTGGGCATTGGTTTTTTTCTTCTTCCAAATAGTCGTTAAAATGTTAGAAGGACTTGGATTTGATAACTCATTTCTCAATCATAATAGAGAAGAATATAAGAGGTGAACTTCCTATGAGAGTCTTTGGCCATAGATGTCATCTAGGCCAATTGAAGTGAGATACAGGAAATATAAGCCTATATTTAGTGTCACTTCATCTTTTTTGTCCTAACTAAATAGTTTTGTGTACTCCATACCTCAAGAAGTTATTTCAATGTAGGCACCTTTTTGGTTGCTTGGTTTGAAAGATTATCTTGCTCATATATTAACTGGCTAGAACTATGCCATTTCTCTCTTCTTTGTAACTAATGAATATTAGCAGGTGAAATTGCTCTGTTGGCTGATGTCTGTTCTTTTCTCAGGTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAG</genome_strand>
        <mrna_strand>AAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E569043" ref_strand="+" ref_description="SGN-E569043 [13421]">
      <seq>tgatcctaatgaagggaatgaaatctccatggccaattcccgtcaaaacatcaggaaattggttaaggatggtttcatcatcaggaaaccaaccaaaattcactcaagatctcgtgctcgcagaatgaaggaggccaagaggaaaggccgtcactctggatatggtaagcgcaaaggtaccagggaggctagactgcctaccaaggtgctttggatgaggagattgagagtcctcaggcgtttgcttcgcaaggtatagggaatcaaagaagattgacaaacacatgtatcatgacatgtaccatgaaggtgaaagggtaatgttttcaagaacaagcgtgtgctgatggaaaaatatccacaagacaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="65169" stop="62555"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64869" g_stop="64829" g_length="41"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="41" r_length="41" r_score="0.976"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64828" i_stop="63671" i_length="1158">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.955" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63670" g_stop="63548" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="42" r_stop="164" r_length="123" r_score="0.984"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63547" i_stop="63057" i_length="491">
            <donor d_prob="0.909" d_score="0.98"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="63056" g_stop="62855" g_length="202"/>
          <reference_exon_boundary r_type="cDNA" r_start="165" r_stop="370" r_length="206" r_score="0.960"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E569043" ref_strand="+">
        <total_alignment_score>0.969</total_alignment_score>
        <cumulative_length_of_scored_exons>366</cumulative_length_of_scored_exons>
        <coverage percentage="0.989" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E569043" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64869" e_stop="64829"/>
          <exon e_start="63670" e_stop="63548"/>
          <exon e_start="63056" e_stop="62855"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCCGTATGTTTCTGTTTTCTGTTTGTTATCAATATCTATTTACGTTTATGCTATCTCTTTTAATCTCTTGTTTGTATGTTATGGCTTCTGATTGTGAAAGATCTATAGTAGGTTTTGATCAGTTTAGCTCCAACGATGCTTAGGTTATGTTACTTTATCGTTTCGCCGTCTTTTCTTGTGTGGAGTGTTTAATTTTGGAATTTGATCAACCGTAGTGTTGTTTTAACCACATATACTCTGATGTCGACCAGTTCAGATCCATAGAAGCATTGATTATTTGTGTTGAGGTTTTAGGTTTGGATTTTGATCAAACATTACAATGTTTCAACTGAATATACTGTTGAGGTATATTTTTGTCGTAGAGTTTGATCAGTTAAGCTCCAGTGTACCATAGATTAATTTACTGTTACTATCAATTTGCCTTTTGTTAGAGTTGCTGTTTTGAATTTGATCAGTATACTCCTTATGCATTGTTCACAAGATTAGCAGCATACTAATGTTTTTTTATTTATGTCTACTGTGTCAGCTTAGAGTGATATTTTTTAGGTTTTTGCATTGAAAACATATTTGTTTTTGGTAAACATGATTAACAAGGATGGTTGTTCTAGTGTTAAATGGATGCGAATAAACAATTATGCTGATTTTTTGGAAAACTGAAGATGTAGTGGATTGAAATTATTGGCAGATGTGGATAGGTTATGTGACAAGTTATATTTGCTGAAGTTTTTGAGTCGTGAGATTGAAATGTAATTGAGCTGTATATGTTCATTACAACACTGTCATTGTAATTTAATCAGTAATGATGATAGGTTACTAAACAGTGGGATGAATTAACTGCAATTATCTTTGTTATTGGTAGATGTCAATATGGAAAGATACCTATTTTGTGGGATTTCATTGGGTATGTTGTTGTATTGGCAGATATTTATTTGGTGTTGCTGCTTTGCGTTATTTGCCTCTTAATCTGATGTTTAGATGACAAAGTGATATTAATGTTTACTCAATCTAGATAACTAGAACATGTTTGCTGGAACAAGCTTATTGGTTGAGCTTGTGCAAGCCAGTTGCAATCCTTGTAGCTCTCCCTATGTCATTGTGCCAACTATTTTTTGTCATATTTCTATGAACTGCCCGTAATCCCTTCCTTTCCACTTAATACAGGTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATGGTACATCCTTGTCTTGACTGTGATTGCAGAAACTCATTTTTCATGCCCTAATTCAGTTTTTAGGTAGCTCTATCAGTTTGCTGTCAACCATTGGGCATTGGTTTTTTTCTTCTTCCAAATAGTCGTTAAAATGTTAGAAGGACTTGGATTTGATAACTCATTTCTCAATCATAATAGAGAAGAATATAAGAGGTGAACTTCCTATGAGAGTCTTTGGCCATAGATGTCATCTAGGCCAATTGAAGTGAGATACAGGAAATATAAGCCTATATTTAGTGTCACTTCATCTTTTTTGTCCTAACTAAATAGTTTTGTGTACTCCATACCTCAAGAAGTTATTTCAATGTAGGCACCTTTTTGGTTGCTTGGTTTGAAAGATTATCTTGCTCATATATTAACTGGCTAGAACTATGCCATTTCTCTCTTCTTTGTAACTAATGAATATTAGCAGGTGAAATTGCTCTGTTGGCTGATGTCTGTTCTTTTCTCAGGTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAA-GTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTA-CATGAAGGTG-AAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGG-AAAATATCCACAAGACAAA</genome_strand>
        <mrna_strand>TGATCCTAATGAAGGGAATGAAATCTCCATGGCCAATTCCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCAAGATCTCGTGCTCGCAGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACCATGAAGGTGAAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAAATATCCACAAGACAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E475917" ref_strand="+" ref_description="SGN-E475917 [cSTB-42-B10]">
      <seq>caaaatcgaaaatggtttcgttgaagctccagaagcggctcgccgctagtgtcctcaagtgtggaagaggaaaagtttggcttgatcctaatgaagggaatgaaatctccatggccaattcccgtcaaaacatcaggaaattggttaaggatggtttcatcatcaggaaaccaaccaaaattcactcaagatctcgtgctcgcagaatgaaggaggccaagaggaaaggccgtcactctggatatggtaagcgcaaaggtaccagggaggctagactgcctaccaaggtgctttggatgaggagattgagagtcctcaagcgtttgcttcgcaagtatagggaatcaaagaagattgacaaacacatgtatcatgacatgtacatgaaggtgaagggtaatgttttcaagaacaagcgtgtgctgatggaaaatatccacaagacaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="65251" stop="62556"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64951" g_stop="64829" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="123" r_length="123" r_score="0.984"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64828" i_stop="63671" i_length="1158">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.955" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63670" g_stop="63548" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="124" r_stop="246" r_length="123" r_score="0.984"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63547" i_stop="63057" i_length="491">
            <donor d_prob="0.909" d_score="0.98"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="63056" g_stop="62856" g_length="201"/>
          <reference_exon_boundary r_type="cDNA" r_start="247" r_stop="447" r_length="201" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E475917" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>447</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E475917" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64951" e_stop="64829"/>
          <exon e_start="63670" e_stop="63548"/>
          <exon e_start="63056" e_stop="62856"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCCGTATGTTTCTGTTTTCTGTTTGTTATCAATATCTATTTACGTTTATGCTATCTCTTTTAATCTCTTGTTTGTATGTTATGGCTTCTGATTGTGAAAGATCTATAGTAGGTTTTGATCAGTTTAGCTCCAACGATGCTTAGGTTATGTTACTTTATCGTTTCGCCGTCTTTTCTTGTGTGGAGTGTTTAATTTTGGAATTTGATCAACCGTAGTGTTGTTTTAACCACATATACTCTGATGTCGACCAGTTCAGATCCATAGAAGCATTGATTATTTGTGTTGAGGTTTTAGGTTTGGATTTTGATCAAACATTACAATGTTTCAACTGAATATACTGTTGAGGTATATTTTTGTCGTAGAGTTTGATCAGTTAAGCTCCAGTGTACCATAGATTAATTTACTGTTACTATCAATTTGCCTTTTGTTAGAGTTGCTGTTTTGAATTTGATCAGTATACTCCTTATGCATTGTTCACAAGATTAGCAGCATACTAATGTTTTTTTATTTATGTCTACTGTGTCAGCTTAGAGTGATATTTTTTAGGTTTTTGCATTGAAAACATATTTGTTTTTGGTAAACATGATTAACAAGGATGGTTGTTCTAGTGTTAAATGGATGCGAATAAACAATTATGCTGATTTTTTGGAAAACTGAAGATGTAGTGGATTGAAATTATTGGCAGATGTGGATAGGTTATGTGACAAGTTATATTTGCTGAAGTTTTTGAGTCGTGAGATTGAAATGTAATTGAGCTGTATATGTTCATTACAACACTGTCATTGTAATTTAATCAGTAATGATGATAGGTTACTAAACAGTGGGATGAATTAACTGCAATTATCTTTGTTATTGGTAGATGTCAATATGGAAAGATACCTATTTTGTGGGATTTCATTGGGTATGTTGTTGTATTGGCAGATATTTATTTGGTGTTGCTGCTTTGCGTTATTTGCCTCTTAATCTGATGTTTAGATGACAAAGTGATATTAATGTTTACTCAATCTAGATAACTAGAACATGTTTGCTGGAACAAGCTTATTGGTTGAGCTTGTGCAAGCCAGTTGCAATCCTTGTAGCTCTCCCTATGTCATTGTGCCAACTATTTTTTGTCATATTTCTATGAACTGCCCGTAATCCCTTCCTTTCCACTTAATACAGGTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATGGTACATCCTTGTCTTGACTGTGATTGCAGAAACTCATTTTTCATGCCCTAATTCAGTTTTTAGGTAGCTCTATCAGTTTGCTGTCAACCATTGGGCATTGGTTTTTTTCTTCTTCCAAATAGTCGTTAAAATGTTAGAAGGACTTGGATTTGATAACTCATTTCTCAATCATAATAGAGAAGAATATAAGAGGTGAACTTCCTATGAGAGTCTTTGGCCATAGATGTCATCTAGGCCAATTGAAGTGAGATACAGGAAATATAAGCCTATATTTAGTGTCACTTCATCTTTTTTGTCCTAACTAAATAGTTTTGTGTACTCCATACCTCAAGAAGTTATTTCAATGTAGGCACCTTTTTGGTTGCTTGGTTTGAAAGATTATCTTGCTCATATATTAACTGGCTAGAACTATGCCATTTCTCTCTTCTTTGTAACTAATGAATATTAGCAGGTGAAATTGCTCTGTTGGCTGATGTCTGTTCTTTTCTCAGGTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAA</genome_strand>
        <mrna_strand>CAAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGAAAAGTTTGGCTTGATCCTAATGAAGGGAATGAAATCTCCATGGCCAATTCCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCAAGATCTCGTGCTCGCAGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAAGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E325087" ref_strand="+" ref_description="SGN-E325087 [cTOC-13-J24]">
      <seq>tcaagtgtggaagaggccaaccttggcttgatcctaatgaaggcaatgaaatctccatggccaattcccgtcaaaacatcaggaaattggttaaggatggtttcatcatcaggaaaccaaccaaaattcactcgagatctcgtgctcgccgaatgaaggaggccaagaggaaaggccgtcactctggatatggtaagcgcaaaggtaccagggaggctagactgcctaccaaggtgctttggatgaggagattgagagtcctcaggcgtttgcttcgcaagtatagggaatcaaagaagattgacaaacacatgtatcatgacatgtacatgaaggtgaagggtaatgttttcaagaacaagcgtgtgctgatggaaaatatccacaagacaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="65197" stop="62556"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64897" g_stop="64829" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="69" r_length="69" r_score="0.957"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64828" i_stop="63671" i_length="1158">
            <donor d_prob="0.998" d_score="0.96"/>
            <acceptor a_prob="0.955" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63670" g_stop="63548" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="70" r_stop="192" r_length="123" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63547" i_stop="63057" i_length="491">
            <donor d_prob="0.909" d_score="1.00"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="63056" g_stop="62856" g_length="201"/>
          <reference_exon_boundary r_type="cDNA" r_start="193" r_stop="393" r_length="201" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E325087" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>393</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E325087" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64897" e_stop="64829"/>
          <exon e_start="63670" e_stop="63548"/>
          <exon e_start="63056" e_stop="62856"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCCGTATGTTTCTGTTTTCTGTTTGTTATCAATATCTATTTACGTTTATGCTATCTCTTTTAATCTCTTGTTTGTATGTTATGGCTTCTGATTGTGAAAGATCTATAGTAGGTTTTGATCAGTTTAGCTCCAACGATGCTTAGGTTATGTTACTTTATCGTTTCGCCGTCTTTTCTTGTGTGGAGTGTTTAATTTTGGAATTTGATCAACCGTAGTGTTGTTTTAACCACATATACTCTGATGTCGACCAGTTCAGATCCATAGAAGCATTGATTATTTGTGTTGAGGTTTTAGGTTTGGATTTTGATCAAACATTACAATGTTTCAACTGAATATACTGTTGAGGTATATTTTTGTCGTAGAGTTTGATCAGTTAAGCTCCAGTGTACCATAGATTAATTTACTGTTACTATCAATTTGCCTTTTGTTAGAGTTGCTGTTTTGAATTTGATCAGTATACTCCTTATGCATTGTTCACAAGATTAGCAGCATACTAATGTTTTTTTATTTATGTCTACTGTGTCAGCTTAGAGTGATATTTTTTAGGTTTTTGCATTGAAAACATATTTGTTTTTGGTAAACATGATTAACAAGGATGGTTGTTCTAGTGTTAAATGGATGCGAATAAACAATTATGCTGATTTTTTGGAAAACTGAAGATGTAGTGGATTGAAATTATTGGCAGATGTGGATAGGTTATGTGACAAGTTATATTTGCTGAAGTTTTTGAGTCGTGAGATTGAAATGTAATTGAGCTGTATATGTTCATTACAACACTGTCATTGTAATTTAATCAGTAATGATGATAGGTTACTAAACAGTGGGATGAATTAACTGCAATTATCTTTGTTATTGGTAGATGTCAATATGGAAAGATACCTATTTTGTGGGATTTCATTGGGTATGTTGTTGTATTGGCAGATATTTATTTGGTGTTGCTGCTTTGCGTTATTTGCCTCTTAATCTGATGTTTAGATGACAAAGTGATATTAATGTTTACTCAATCTAGATAACTAGAACATGTTTGCTGGAACAAGCTTATTGGTTGAGCTTGTGCAAGCCAGTTGCAATCCTTGTAGCTCTCCCTATGTCATTGTGCCAACTATTTTTTGTCATATTTCTATGAACTGCCCGTAATCCCTTCCTTTCCACTTAATACAGGTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATGGTACATCCTTGTCTTGACTGTGATTGCAGAAACTCATTTTTCATGCCCTAATTCAGTTTTTAGGTAGCTCTATCAGTTTGCTGTCAACCATTGGGCATTGGTTTTTTTCTTCTTCCAAATAGTCGTTAAAATGTTAGAAGGACTTGGATTTGATAACTCATTTCTCAATCATAATAGAGAAGAATATAAGAGGTGAACTTCCTATGAGAGTCTTTGGCCATAGATGTCATCTAGGCCAATTGAAGTGAGATACAGGAAATATAAGCCTATATTTAGTGTCACTTCATCTTTTTTGTCCTAACTAAATAGTTTTGTGTACTCCATACCTCAAGAAGTTATTTCAATGTAGGCACCTTTTTGGTTGCTTGGTTTGAAAGATTATCTTGCTCATATATTAACTGGCTAGAACTATGCCATTTCTCTCTTCTTTGTAACTAATGAATATTAGCAGGTGAAATTGCTCTGTTGGCTGATGTCTGTTCTTTTCTCAGGTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAA</genome_strand>
        <mrna_strand>TCAAGTGTGGAAGAGGCCAACCTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E319497" ref_strand="+" ref_description="SGN-E319497 [cTOB-15-K1]">
      <seq>caaaatcgaaaatggtttcgttgaagctccagaagcggctcgccgctagtgtcctcaagtgtggaagaggcaaagtttggcttgatcctaatgaaggcaatgaaatctccatggccaattcccgtcaaaacatcaggaaattggttaaggatggtttcatcatcaggaaaccaaccaaaattcactcgagatctcgtgctcgccgaatgaaggaggccaagaggaaaggccgtcactctggatatggtaagcgcaaaggtaccagggaggctagactgcctaccaaggtgctttggatgaggagattgagagtcctcaggcgtttgcttcgcaagtatagggaatcaaagaagattgacaaacacatgtatcatgacatgtacatgaaggtgaagggtaatgttttcaagaacaaccgtgtgctgatggaaaatatccacaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="65251" stop="62560"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64951" g_stop="64829" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="123" r_length="123" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64828" i_stop="63671" i_length="1158">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.955" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63670" g_stop="63548" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="124" r_stop="246" r_length="123" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63547" i_stop="63057" i_length="491">
            <donor d_prob="0.909" d_score="1.00"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="63056" g_stop="62860" g_length="197"/>
          <reference_exon_boundary r_type="cDNA" r_start="247" r_stop="443" r_length="197" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E319497" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>443</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E319497" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64951" e_stop="64829"/>
          <exon e_start="63670" e_stop="63548"/>
          <exon e_start="63056" e_stop="62860"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCCGTATGTTTCTGTTTTCTGTTTGTTATCAATATCTATTTACGTTTATGCTATCTCTTTTAATCTCTTGTTTGTATGTTATGGCTTCTGATTGTGAAAGATCTATAGTAGGTTTTGATCAGTTTAGCTCCAACGATGCTTAGGTTATGTTACTTTATCGTTTCGCCGTCTTTTCTTGTGTGGAGTGTTTAATTTTGGAATTTGATCAACCGTAGTGTTGTTTTAACCACATATACTCTGATGTCGACCAGTTCAGATCCATAGAAGCATTGATTATTTGTGTTGAGGTTTTAGGTTTGGATTTTGATCAAACATTACAATGTTTCAACTGAATATACTGTTGAGGTATATTTTTGTCGTAGAGTTTGATCAGTTAAGCTCCAGTGTACCATAGATTAATTTACTGTTACTATCAATTTGCCTTTTGTTAGAGTTGCTGTTTTGAATTTGATCAGTATACTCCTTATGCATTGTTCACAAGATTAGCAGCATACTAATGTTTTTTTATTTATGTCTACTGTGTCAGCTTAGAGTGATATTTTTTAGGTTTTTGCATTGAAAACATATTTGTTTTTGGTAAACATGATTAACAAGGATGGTTGTTCTAGTGTTAAATGGATGCGAATAAACAATTATGCTGATTTTTTGGAAAACTGAAGATGTAGTGGATTGAAATTATTGGCAGATGTGGATAGGTTATGTGACAAGTTATATTTGCTGAAGTTTTTGAGTCGTGAGATTGAAATGTAATTGAGCTGTATATGTTCATTACAACACTGTCATTGTAATTTAATCAGTAATGATGATAGGTTACTAAACAGTGGGATGAATTAACTGCAATTATCTTTGTTATTGGTAGATGTCAATATGGAAAGATACCTATTTTGTGGGATTTCATTGGGTATGTTGTTGTATTGGCAGATATTTATTTGGTGTTGCTGCTTTGCGTTATTTGCCTCTTAATCTGATGTTTAGATGACAAAGTGATATTAATGTTTACTCAATCTAGATAACTAGAACATGTTTGCTGGAACAAGCTTATTGGTTGAGCTTGTGCAAGCCAGTTGCAATCCTTGTAGCTCTCCCTATGTCATTGTGCCAACTATTTTTTGTCATATTTCTATGAACTGCCCGTAATCCCTTCCTTTCCACTTAATACAGGTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATGGTACATCCTTGTCTTGACTGTGATTGCAGAAACTCATTTTTCATGCCCTAATTCAGTTTTTAGGTAGCTCTATCAGTTTGCTGTCAACCATTGGGCATTGGTTTTTTTCTTCTTCCAAATAGTCGTTAAAATGTTAGAAGGACTTGGATTTGATAACTCATTTCTCAATCATAATAGAGAAGAATATAAGAGGTGAACTTCCTATGAGAGTCTTTGGCCATAGATGTCATCTAGGCCAATTGAAGTGAGATACAGGAAATATAAGCCTATATTTAGTGTCACTTCATCTTTTTTGTCCTAACTAAATAGTTTTGTGTACTCCATACCTCAAGAAGTTATTTCAATGTAGGCACCTTTTTGGTTGCTTGGTTTGAAAGATTATCTTGCTCATATATTAACTGGCTAGAACTATGCCATTTCTCTCTTCTTTGTAACTAATGAATATTAGCAGGTGAAATTGCTCTGTTGGCTGATGTCTGTTCTTTTCTCAGGTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAG</genome_strand>
        <mrna_strand>CAAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAACCGTGTGCTGATGGAAAATATCCACAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E290571" ref_strand="+" ref_description="SGN-E290571 [cLES-20-F5]">
      <seq>catcaggaaattggttaaggatggtttcatcatcaggaaaccaaccaaaattcactcgagatctcgtgctcgccgaatgaaggaggccaagaggaaaggccgtcactctggatatggtaagcgcaaaggtaccagggaggctagactgcctaccaaggtgctttggatgaggagattgagagtcctcaggcgtttgcttcgcaagtatagggaatcaaagaagattgacaaacacatgtatcatgacatgtacatgaaggtgaagggtaatgttttcaagaacaagcgtgtgctgatggaaaatat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="63963" stop="62567"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="63663" g_stop="63548" g_length="116"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="116" r_length="116" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="63547" i_stop="63057" i_length="491">
            <donor d_prob="0.909" d_score="1.00"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63056" g_stop="62867" g_length="190"/>
          <reference_exon_boundary r_type="cDNA" r_start="117" r_stop="306" r_length="190" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E290571" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>306</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E290571" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="63663" e_stop="63548"/>
          <exon e_start="63056" e_stop="62867"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATGGTACATCCTTGTCTTGACTGTGATTGCAGAAACTCATTTTTCATGCCCTAATTCAGTTTTTAGGTAGCTCTATCAGTTTGCTGTCAACCATTGGGCATTGGTTTTTTTCTTCTTCCAAATAGTCGTTAAAATGTTAGAAGGACTTGGATTTGATAACTCATTTCTCAATCATAATAGAGAAGAATATAAGAGGTGAACTTCCTATGAGAGTCTTTGGCCATAGATGTCATCTAGGCCAATTGAAGTGAGATACAGGAAATATAAGCCTATATTTAGTGTCACTTCATCTTTTTTGTCCTAACTAAATAGTTTTGTGTACTCCATACCTCAAGAAGTTATTTCAATGTAGGCACCTTTTTGGTTGCTTGGTTTGAAAGATTATCTTGCTCATATATTAACTGGCTAGAACTATGCCATTTCTCTCTTCTTTGTAACTAATGAATATTAGCAGGTGAAATTGCTCTGTTGGCTGATGTCTGTTCTTTTCTCAGGTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATAT</genome_strand>
        <mrna_strand>CATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E254915" ref_strand="+" ref_description="SGN-E254915 [cLEG-33-M17]">
      <seq>ctcgccgctagtgtcctcaagtgtggaagaggcaaagtttggcttgatcctaatgaaggcaatgaaatctccatggccaattcccgtcaaaacatcacgaaattggttaaggatggtttcatcatcaggaaaccaaccaaaattcactcgagatctcgtgctcgccgaatgaaggaggccaagaggaaaggccgtcactctggatatggtaagcgcaaaggtaccagggaggctagactgcctaccaaggtgctttggatgaggagattgagagtcctcacgcgtttgcttcgcaagtatagggaatcaaagaagattgacaaacacatgtatcatgacatgtacatgaaggtgaagggtaatgttttcaagaacaagcgtgtgctgatggaaaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="65213" stop="62569"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64913" g_stop="64829" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="85" r_length="85" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64828" i_stop="63671" i_length="1158">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.955" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63670" g_stop="63548" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="86" r_stop="208" r_length="123" r_score="0.992"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63547" i_stop="63057" i_length="491">
            <donor d_prob="0.909" d_score="1.00"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="63056" g_stop="62869" g_length="188"/>
          <reference_exon_boundary r_type="cDNA" r_start="209" r_stop="396" r_length="188" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E254915" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>396</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E254915" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64913" e_stop="64829"/>
          <exon e_start="63670" e_stop="63548"/>
          <exon e_start="63056" e_stop="62869"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCCGTATGTTTCTGTTTTCTGTTTGTTATCAATATCTATTTACGTTTATGCTATCTCTTTTAATCTCTTGTTTGTATGTTATGGCTTCTGATTGTGAAAGATCTATAGTAGGTTTTGATCAGTTTAGCTCCAACGATGCTTAGGTTATGTTACTTTATCGTTTCGCCGTCTTTTCTTGTGTGGAGTGTTTAATTTTGGAATTTGATCAACCGTAGTGTTGTTTTAACCACATATACTCTGATGTCGACCAGTTCAGATCCATAGAAGCATTGATTATTTGTGTTGAGGTTTTAGGTTTGGATTTTGATCAAACATTACAATGTTTCAACTGAATATACTGTTGAGGTATATTTTTGTCGTAGAGTTTGATCAGTTAAGCTCCAGTGTACCATAGATTAATTTACTGTTACTATCAATTTGCCTTTTGTTAGAGTTGCTGTTTTGAATTTGATCAGTATACTCCTTATGCATTGTTCACAAGATTAGCAGCATACTAATGTTTTTTTATTTATGTCTACTGTGTCAGCTTAGAGTGATATTTTTTAGGTTTTTGCATTGAAAACATATTTGTTTTTGGTAAACATGATTAACAAGGATGGTTGTTCTAGTGTTAAATGGATGCGAATAAACAATTATGCTGATTTTTTGGAAAACTGAAGATGTAGTGGATTGAAATTATTGGCAGATGTGGATAGGTTATGTGACAAGTTATATTTGCTGAAGTTTTTGAGTCGTGAGATTGAAATGTAATTGAGCTGTATATGTTCATTACAACACTGTCATTGTAATTTAATCAGTAATGATGATAGGTTACTAAACAGTGGGATGAATTAACTGCAATTATCTTTGTTATTGGTAGATGTCAATATGGAAAGATACCTATTTTGTGGGATTTCATTGGGTATGTTGTTGTATTGGCAGATATTTATTTGGTGTTGCTGCTTTGCGTTATTTGCCTCTTAATCTGATGTTTAGATGACAAAGTGATATTAATGTTTACTCAATCTAGATAACTAGAACATGTTTGCTGGAACAAGCTTATTGGTTGAGCTTGTGCAAGCCAGTTGCAATCCTTGTAGCTCTCCCTATGTCATTGTGCCAACTATTTTTTGTCATATTTCTATGAACTGCCCGTAATCCCTTCCTTTCCACTTAATACAGGTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATGGTACATCCTTGTCTTGACTGTGATTGCAGAAACTCATTTTTCATGCCCTAATTCAGTTTTTAGGTAGCTCTATCAGTTTGCTGTCAACCATTGGGCATTGGTTTTTTTCTTCTTCCAAATAGTCGTTAAAATGTTAGAAGGACTTGGATTTGATAACTCATTTCTCAATCATAATAGAGAAGAATATAAGAGGTGAACTTCCTATGAGAGTCTTTGGCCATAGATGTCATCTAGGCCAATTGAAGTGAGATACAGGAAATATAAGCCTATATTTAGTGTCACTTCATCTTTTTTGTCCTAACTAAATAGTTTTGTGTACTCCATACCTCAAGAAGTTATTTCAATGTAGGCACCTTTTTGGTTGCTTGGTTTGAAAGATTATCTTGCTCATATATTAACTGGCTAGAACTATGCCATTTCTCTCTTCTTTGTAACTAATGAATATTAGCAGGTGAAATTGCTCTGTTGGCTGATGTCTGTTCTTTTCTCAGGTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAAT</genome_strand>
        <mrna_strand>CTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAAAACATCACGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCACGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E248210" ref_strand="+" ref_description="SGN-E248210 [cLEF-55-O22]">
      <seq>gcaaaatcgaaaatggtttcgttgaagctccagaagcggctcgccgctagtgtcctcaagtgtggaagaagcaaagtttggcttgatcctaatgaaggcaatgaaatctccatggccaattcccgtcaaaacatcaggaaattggttaaggatggtttcatcatcaggaaaccaaccaaaattcactccagatctcgtgctcgccgaatgaacgaatgccctacgaaaggccgtcactctggatatggtaagcgcaaaggtaccagggaggctagactgcctaccaaggtgctttggatgaggagattgagagtcctcaagcgtttgcttcgcaagtatagggaatcaaagaagattgacaaacacatgtatcatgacatgtacatgaaggtgaagggtaatgttttcaagaacaagcgtgtgctgatggaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="65251" stop="62570"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64952" g_stop="64829" g_length="124"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="124" r_length="124" r_score="0.984"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64828" i_stop="63671" i_length="1158">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.955" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63670" g_stop="63548" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="125" r_stop="247" r_length="123" r_score="0.927"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63547" i_stop="63057" i_length="491">
            <donor d_prob="0.909" d_score="0.84"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="63056" g_stop="62870" g_length="187"/>
          <reference_exon_boundary r_type="cDNA" r_start="248" r_stop="434" r_length="187" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E248210" ref_strand="+">
        <total_alignment_score>0.972</total_alignment_score>
        <cumulative_length_of_scored_exons>434</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E248210" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64952" e_stop="64829"/>
          <exon e_start="63670" e_stop="63548"/>
          <exon e_start="63056" e_stop="62870"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACAAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCCGTATGTTTCTGTTTTCTGTTTGTTATCAATATCTATTTACGTTTATGCTATCTCTTTTAATCTCTTGTTTGTATGTTATGGCTTCTGATTGTGAAAGATCTATAGTAGGTTTTGATCAGTTTAGCTCCAACGATGCTTAGGTTATGTTACTTTATCGTTTCGCCGTCTTTTCTTGTGTGGAGTGTTTAATTTTGGAATTTGATCAACCGTAGTGTTGTTTTAACCACATATACTCTGATGTCGACCAGTTCAGATCCATAGAAGCATTGATTATTTGTGTTGAGGTTTTAGGTTTGGATTTTGATCAAACATTACAATGTTTCAACTGAATATACTGTTGAGGTATATTTTTGTCGTAGAGTTTGATCAGTTAAGCTCCAGTGTACCATAGATTAATTTACTGTTACTATCAATTTGCCTTTTGTTAGAGTTGCTGTTTTGAATTTGATCAGTATACTCCTTATGCATTGTTCACAAGATTAGCAGCATACTAATGTTTTTTTATTTATGTCTACTGTGTCAGCTTAGAGTGATATTTTTTAGGTTTTTGCATTGAAAACATATTTGTTTTTGGTAAACATGATTAACAAGGATGGTTGTTCTAGTGTTAAATGGATGCGAATAAACAATTATGCTGATTTTTTGGAAAACTGAAGATGTAGTGGATTGAAATTATTGGCAGATGTGGATAGGTTATGTGACAAGTTATATTTGCTGAAGTTTTTGAGTCGTGAGATTGAAATGTAATTGAGCTGTATATGTTCATTACAACACTGTCATTGTAATTTAATCAGTAATGATGATAGGTTACTAAACAGTGGGATGAATTAACTGCAATTATCTTTGTTATTGGTAGATGTCAATATGGAAAGATACCTATTTTGTGGGATTTCATTGGGTATGTTGTTGTATTGGCAGATATTTATTTGGTGTTGCTGCTTTGCGTTATTTGCCTCTTAATCTGATGTTTAGATGACAAAGTGATATTAATGTTTACTCAATCTAGATAACTAGAACATGTTTGCTGGAACAAGCTTATTGGTTGAGCTTGTGCAAGCCAGTTGCAATCCTTGTAGCTCTCCCTATGTCATTGTGCCAACTATTTTTTGTCATATTTCTATGAACTGCCCGTAATCCCTTCCTTTCCACTTAATACAGGTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATGGTACATCCTTGTCTTGACTGTGATTGCAGAAACTCATTTTTCATGCCCTAATTCAGTTTTTAGGTAGCTCTATCAGTTTGCTGTCAACCATTGGGCATTGGTTTTTTTCTTCTTCCAAATAGTCGTTAAAATGTTAGAAGGACTTGGATTTGATAACTCATTTCTCAATCATAATAGAGAAGAATATAAGAGGTGAACTTCCTATGAGAGTCTTTGGCCATAGATGTCATCTAGGCCAATTGAAGTGAGATACAGGAAATATAAGCCTATATTTAGTGTCACTTCATCTTTTTTGTCCTAACTAAATAGTTTTGTGTACTCCATACCTCAAGAAGTTATTTCAATGTAGGCACCTTTTTGGTTGCTTGGTTTGAAAGATTATCTTGCTCATATATTAACTGGCTAGAACTATGCCATTTCTCTCTTCTTTGTAACTAATGAATATTAGCAGGTGAAATTGCTCTGTTGGCTGATGTCTGTTCTTTTCTCAGGTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAA</genome_strand>
        <mrna_strand>GCAAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAAGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCCAGATCTCGTGCTCGCCGAATGAACGAATGCCCTACGAAAGGCCGTCACTCTGGATATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAAGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E290951" ref_strand="+" ref_description="SGN-E290951 [cLET-8-G2]">
      <seq>aaaatcgaaaatggtttcgttgaagctccagaagcggctcgccgctagtgtcctcaagtgtggaagaggcaaagtttggcttgatcctaatgaaggcaatgaaatctccatggccaattcccgtcaaaacatcaggaaattggttaaggatggtttcatcatcaggaaaccaaccaaaattcactcgagatctcgtgctcgccgaatgaaggaggccaagaggaaaggccgtcactctggatatggtaagcgcaaaggtaccagggaggctagactgcctaccaaggtgctttggatgaggagattgagagtcctcaggcgtttgcttcgcacgtatagggaatcaaagaagattgacaaacacatgtatcatgacatgtacatgaaggtgaagggtaatgttttaaagaacaagcgtgtgctgatggaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="65250" stop="62570"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64950" g_stop="64829" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="122" r_length="122" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64828" i_stop="63671" i_length="1158">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.955" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63670" g_stop="63548" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="123" r_stop="245" r_length="123" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63547" i_stop="63057" i_length="491">
            <donor d_prob="0.909" d_score="1.00"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="63056" g_stop="62870" g_length="187"/>
          <reference_exon_boundary r_type="cDNA" r_start="246" r_stop="432" r_length="187" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E290951" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>432</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E290951" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64950" e_stop="64829"/>
          <exon e_start="63670" e_stop="63548"/>
          <exon e_start="63056" e_stop="62870"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCCGTATGTTTCTGTTTTCTGTTTGTTATCAATATCTATTTACGTTTATGCTATCTCTTTTAATCTCTTGTTTGTATGTTATGGCTTCTGATTGTGAAAGATCTATAGTAGGTTTTGATCAGTTTAGCTCCAACGATGCTTAGGTTATGTTACTTTATCGTTTCGCCGTCTTTTCTTGTGTGGAGTGTTTAATTTTGGAATTTGATCAACCGTAGTGTTGTTTTAACCACATATACTCTGATGTCGACCAGTTCAGATCCATAGAAGCATTGATTATTTGTGTTGAGGTTTTAGGTTTGGATTTTGATCAAACATTACAATGTTTCAACTGAATATACTGTTGAGGTATATTTTTGTCGTAGAGTTTGATCAGTTAAGCTCCAGTGTACCATAGATTAATTTACTGTTACTATCAATTTGCCTTTTGTTAGAGTTGCTGTTTTGAATTTGATCAGTATACTCCTTATGCATTGTTCACAAGATTAGCAGCATACTAATGTTTTTTTATTTATGTCTACTGTGTCAGCTTAGAGTGATATTTTTTAGGTTTTTGCATTGAAAACATATTTGTTTTTGGTAAACATGATTAACAAGGATGGTTGTTCTAGTGTTAAATGGATGCGAATAAACAATTATGCTGATTTTTTGGAAAACTGAAGATGTAGTGGATTGAAATTATTGGCAGATGTGGATAGGTTATGTGACAAGTTATATTTGCTGAAGTTTTTGAGTCGTGAGATTGAAATGTAATTGAGCTGTATATGTTCATTACAACACTGTCATTGTAATTTAATCAGTAATGATGATAGGTTACTAAACAGTGGGATGAATTAACTGCAATTATCTTTGTTATTGGTAGATGTCAATATGGAAAGATACCTATTTTGTGGGATTTCATTGGGTATGTTGTTGTATTGGCAGATATTTATTTGGTGTTGCTGCTTTGCGTTATTTGCCTCTTAATCTGATGTTTAGATGACAAAGTGATATTAATGTTTACTCAATCTAGATAACTAGAACATGTTTGCTGGAACAAGCTTATTGGTTGAGCTTGTGCAAGCCAGTTGCAATCCTTGTAGCTCTCCCTATGTCATTGTGCCAACTATTTTTTGTCATATTTCTATGAACTGCCCGTAATCCCTTCCTTTCCACTTAATACAGGTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATGGTACATCCTTGTCTTGACTGTGATTGCAGAAACTCATTTTTCATGCCCTAATTCAGTTTTTAGGTAGCTCTATCAGTTTGCTGTCAACCATTGGGCATTGGTTTTTTTCTTCTTCCAAATAGTCGTTAAAATGTTAGAAGGACTTGGATTTGATAACTCATTTCTCAATCATAATAGAGAAGAATATAAGAGGTGAACTTCCTATGAGAGTCTTTGGCCATAGATGTCATCTAGGCCAATTGAAGTGAGATACAGGAAATATAAGCCTATATTTAGTGTCACTTCATCTTTTTTGTCCTAACTAAATAGTTTTGTGTACTCCATACCTCAAGAAGTTATTTCAATGTAGGCACCTTTTTGGTTGCTTGGTTTGAAAGATTATCTTGCTCATATATTAACTGGCTAGAACTATGCCATTTCTCTCTTCTTTGTAACTAATGAATATTAGCAGGTGAAATTGCTCTGTTGGCTGATGTCTGTTCTTTTCTCAGGTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAA</genome_strand>
        <mrna_strand>AAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCACGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTAAAGAACAAGCGTGTGCTGATGGAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E287869" ref_strand="+" ref_description="SGN-E287869 [cLES-19-M17]">
      <seq>aaaatcgaaaatggtttcgttgaagctccagaagcggctcgccgctagtgtcctcaagtgtggaagaggcaaagtttggcttgatcctaatgaaggcaatgaaatctccatggccaattcccgtcaaaacatcaggaaattggttaaggatggtttcatcatcaggaaaccaaccaaaattcactcgagatctcgtgctcgccgaatgaaggaggccaagaggaaaggccgtcactctggatatggtaagcgcaaaggtaccagggaggctagactgcctaccaaggtgctttggatgaggagattgagagtcctcaggcgtttgcttcgcaagtatagggaatcaaagaagattgacaaacacatgtatcatgacatgtacatgaaggtgaagggtaatgttttcaagaacaaacgtgtgctgatggaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="65250" stop="62570"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64950" g_stop="64829" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="122" r_length="122" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64828" i_stop="63671" i_length="1158">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.955" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63670" g_stop="63548" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="123" r_stop="245" r_length="123" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63547" i_stop="63057" i_length="491">
            <donor d_prob="0.909" d_score="1.00"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="63056" g_stop="62870" g_length="187"/>
          <reference_exon_boundary r_type="cDNA" r_start="246" r_stop="432" r_length="187" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E287869" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>432</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E287869" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64950" e_stop="64829"/>
          <exon e_start="63670" e_stop="63548"/>
          <exon e_start="63056" e_stop="62870"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCCGTATGTTTCTGTTTTCTGTTTGTTATCAATATCTATTTACGTTTATGCTATCTCTTTTAATCTCTTGTTTGTATGTTATGGCTTCTGATTGTGAAAGATCTATAGTAGGTTTTGATCAGTTTAGCTCCAACGATGCTTAGGTTATGTTACTTTATCGTTTCGCCGTCTTTTCTTGTGTGGAGTGTTTAATTTTGGAATTTGATCAACCGTAGTGTTGTTTTAACCACATATACTCTGATGTCGACCAGTTCAGATCCATAGAAGCATTGATTATTTGTGTTGAGGTTTTAGGTTTGGATTTTGATCAAACATTACAATGTTTCAACTGAATATACTGTTGAGGTATATTTTTGTCGTAGAGTTTGATCAGTTAAGCTCCAGTGTACCATAGATTAATTTACTGTTACTATCAATTTGCCTTTTGTTAGAGTTGCTGTTTTGAATTTGATCAGTATACTCCTTATGCATTGTTCACAAGATTAGCAGCATACTAATGTTTTTTTATTTATGTCTACTGTGTCAGCTTAGAGTGATATTTTTTAGGTTTTTGCATTGAAAACATATTTGTTTTTGGTAAACATGATTAACAAGGATGGTTGTTCTAGTGTTAAATGGATGCGAATAAACAATTATGCTGATTTTTTGGAAAACTGAAGATGTAGTGGATTGAAATTATTGGCAGATGTGGATAGGTTATGTGACAAGTTATATTTGCTGAAGTTTTTGAGTCGTGAGATTGAAATGTAATTGAGCTGTATATGTTCATTACAACACTGTCATTGTAATTTAATCAGTAATGATGATAGGTTACTAAACAGTGGGATGAATTAACTGCAATTATCTTTGTTATTGGTAGATGTCAATATGGAAAGATACCTATTTTGTGGGATTTCATTGGGTATGTTGTTGTATTGGCAGATATTTATTTGGTGTTGCTGCTTTGCGTTATTTGCCTCTTAATCTGATGTTTAGATGACAAAGTGATATTAATGTTTACTCAATCTAGATAACTAGAACATGTTTGCTGGAACAAGCTTATTGGTTGAGCTTGTGCAAGCCAGTTGCAATCCTTGTAGCTCTCCCTATGTCATTGTGCCAACTATTTTTTGTCATATTTCTATGAACTGCCCGTAATCCCTTCCTTTCCACTTAATACAGGTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATGGTACATCCTTGTCTTGACTGTGATTGCAGAAACTCATTTTTCATGCCCTAATTCAGTTTTTAGGTAGCTCTATCAGTTTGCTGTCAACCATTGGGCATTGGTTTTTTTCTTCTTCCAAATAGTCGTTAAAATGTTAGAAGGACTTGGATTTGATAACTCATTTCTCAATCATAATAGAGAAGAATATAAGAGGTGAACTTCCTATGAGAGTCTTTGGCCATAGATGTCATCTAGGCCAATTGAAGTGAGATACAGGAAATATAAGCCTATATTTAGTGTCACTTCATCTTTTTTGTCCTAACTAAATAGTTTTGTGTACTCCATACCTCAAGAAGTTATTTCAATGTAGGCACCTTTTTGGTTGCTTGGTTTGAAAGATTATCTTGCTCATATATTAACTGGCTAGAACTATGCCATTTCTCTCTTCTTTGTAACTAATGAATATTAGCAGGTGAAATTGCTCTGTTGGCTGATGTCTGTTCTTTTCTCAGGTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAA</genome_strand>
        <mrna_strand>AAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAACGTGTGCTGATGGAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E335395" ref_strand="+" ref_description="SGN-E335395 [cTOE-2-I14]">
      <seq>tcacaaaatcgaaaatggtttcgttgaagctccagaagcggctcgccgctagtgtcctcaagtgtggaagaggcaaagtttggcttgatcctaatgaaggcaatgaaatctccatggccaattcccgtcaaaacatcaggaaattggttaaggatggtttcatcatcaggaaaccaaccaaaattcactcgagatctcgtgctcgccgaatgaaggaggccaagaggaaaggccgtcactctggatatggtaagcgcaaaggtaccatggaggctagactgcctaccaaggtgctttggatgaggagattgagagtcctcaggcgtttgcttcgcaagtatagggaatcaatgaagattgacaaacacatgtatcatgacatgtacatgaaggtgaagggtaatgttttcaagaacaagcgtgtgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="65254" stop="62579"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64954" g_stop="64829" g_length="126"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="126" r_length="126" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64828" i_stop="63671" i_length="1158">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.955" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63670" g_stop="63548" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="127" r_stop="249" r_length="123" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63547" i_stop="63057" i_length="491">
            <donor d_prob="0.909" d_score="1.00"/>
            <acceptor a_prob="0.975" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="63056" g_stop="62879" g_length="178"/>
          <reference_exon_boundary r_type="cDNA" r_start="250" r_stop="427" r_length="178" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E335395" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>427</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E335395" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64954" e_stop="64829"/>
          <exon e_start="63670" e_stop="63548"/>
          <exon e_start="63056" e_stop="62879"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCACAAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCCGTATGTTTCTGTTTTCTGTTTGTTATCAATATCTATTTACGTTTATGCTATCTCTTTTAATCTCTTGTTTGTATGTTATGGCTTCTGATTGTGAAAGATCTATAGTAGGTTTTGATCAGTTTAGCTCCAACGATGCTTAGGTTATGTTACTTTATCGTTTCGCCGTCTTTTCTTGTGTGGAGTGTTTAATTTTGGAATTTGATCAACCGTAGTGTTGTTTTAACCACATATACTCTGATGTCGACCAGTTCAGATCCATAGAAGCATTGATTATTTGTGTTGAGGTTTTAGGTTTGGATTTTGATCAAACATTACAATGTTTCAACTGAATATACTGTTGAGGTATATTTTTGTCGTAGAGTTTGATCAGTTAAGCTCCAGTGTACCATAGATTAATTTACTGTTACTATCAATTTGCCTTTTGTTAGAGTTGCTGTTTTGAATTTGATCAGTATACTCCTTATGCATTGTTCACAAGATTAGCAGCATACTAATGTTTTTTTATTTATGTCTACTGTGTCAGCTTAGAGTGATATTTTTTAGGTTTTTGCATTGAAAACATATTTGTTTTTGGTAAACATGATTAACAAGGATGGTTGTTCTAGTGTTAAATGGATGCGAATAAACAATTATGCTGATTTTTTGGAAAACTGAAGATGTAGTGGATTGAAATTATTGGCAGATGTGGATAGGTTATGTGACAAGTTATATTTGCTGAAGTTTTTGAGTCGTGAGATTGAAATGTAATTGAGCTGTATATGTTCATTACAACACTGTCATTGTAATTTAATCAGTAATGATGATAGGTTACTAAACAGTGGGATGAATTAACTGCAATTATCTTTGTTATTGGTAGATGTCAATATGGAAAGATACCTATTTTGTGGGATTTCATTGGGTATGTTGTTGTATTGGCAGATATTTATTTGGTGTTGCTGCTTTGCGTTATTTGCCTCTTAATCTGATGTTTAGATGACAAAGTGATATTAATGTTTACTCAATCTAGATAACTAGAACATGTTTGCTGGAACAAGCTTATTGGTTGAGCTTGTGCAAGCCAGTTGCAATCCTTGTAGCTCTCCCTATGTCATTGTGCCAACTATTTTTTGTCATATTTCTATGAACTGCCCGTAATCCCTTCCTTTCCACTTAATACAGGTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATGGTACATCCTTGTCTTGACTGTGATTGCAGAAACTCATTTTTCATGCCCTAATTCAGTTTTTAGGTAGCTCTATCAGTTTGCTGTCAACCATTGGGCATTGGTTTTTTTCTTCTTCCAAATAGTCGTTAAAATGTTAGAAGGACTTGGATTTGATAACTCATTTCTCAATCATAATAGAGAAGAATATAAGAGGTGAACTTCCTATGAGAGTCTTTGGCCATAGATGTCATCTAGGCCAATTGAAGTGAGATACAGGAAATATAAGCCTATATTTAGTGTCACTTCATCTTTTTTGTCCTAACTAAATAGTTTTGTGTACTCCATACCTCAAGAAGTTATTTCAATGTAGGCACCTTTTTGGTTGCTTGGTTTGAAAGATTATCTTGCTCATATATTAACTGGCTAGAACTATGCCATTTCTCTCTTCTTTGTAACTAATGAATATTAGCAGGTGAAATTGCTCTGTTGGCTGATGTCTGTTCTTTTCTCAGGTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCT</genome_strand>
        <mrna_strand>TCACAAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGCGCAAAGGTACCATGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAATGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E291990" ref_strand="+" ref_description="SGN-E291990 [cLET-7-B5]">
      <seq>caaaatcgaaaatggttttgttgaagcttcagaagcggctcgccgctagtgtcctcaagtgtggaagaagcaaagtttggcttgatcctaatgaatgcaatgaaatctccatggccaattcccgtcaaaacatcaggaaattggttaaggatggtttcatcatcatgaaaccaaccaaaattcactcagagatctcgtgctcgccgaatgaaggaggccaataggaaaggccgtcactctggatatggtaagcgcaaaggtaccagggatgctatactgcctaccaaggtgctttgtatgaggagattgacagtcctcaggcgtttgcttcgcaagtatagggaatcaaagaactattgacgaacacatgtatcatgacatgtacatgaaggtgaagggcaatgttttcaagaacaagcgtgtg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="65251" stop="62581"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64951" g_stop="64829" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="123" r_length="123" r_score="0.967"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64828" i_stop="63671" i_length="1158">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.955" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63670" g_stop="63548" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="124" r_stop="247" r_length="124" r_score="0.967"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63547" i_stop="63057" i_length="491">
            <donor d_prob="0.909" d_score="0.98"/>
            <acceptor a_prob="0.975" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="63056" g_stop="62881" g_length="176"/>
          <reference_exon_boundary r_type="cDNA" r_start="248" r_stop="424" r_length="177" r_score="0.949"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E291990" ref_strand="+">
        <total_alignment_score>0.960</total_alignment_score>
        <cumulative_length_of_scored_exons>422</cumulative_length_of_scored_exons>
        <coverage percentage="0.995" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E291990" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64951" e_stop="64829"/>
          <exon e_start="63670" e_stop="63548"/>
          <exon e_start="63056" e_stop="62881"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCCGTATGTTTCTGTTTTCTGTTTGTTATCAATATCTATTTACGTTTATGCTATCTCTTTTAATCTCTTGTTTGTATGTTATGGCTTCTGATTGTGAAAGATCTATAGTAGGTTTTGATCAGTTTAGCTCCAACGATGCTTAGGTTATGTTACTTTATCGTTTCGCCGTCTTTTCTTGTGTGGAGTGTTTAATTTTGGAATTTGATCAACCGTAGTGTTGTTTTAACCACATATACTCTGATGTCGACCAGTTCAGATCCATAGAAGCATTGATTATTTGTGTTGAGGTTTTAGGTTTGGATTTTGATCAAACATTACAATGTTTCAACTGAATATACTGTTGAGGTATATTTTTGTCGTAGAGTTTGATCAGTTAAGCTCCAGTGTACCATAGATTAATTTACTGTTACTATCAATTTGCCTTTTGTTAGAGTTGCTGTTTTGAATTTGATCAGTATACTCCTTATGCATTGTTCACAAGATTAGCAGCATACTAATGTTTTTTTATTTATGTCTACTGTGTCAGCTTAGAGTGATATTTTTTAGGTTTTTGCATTGAAAACATATTTGTTTTTGGTAAACATGATTAACAAGGATGGTTGTTCTAGTGTTAAATGGATGCGAATAAACAATTATGCTGATTTTTTGGAAAACTGAAGATGTAGTGGATTGAAATTATTGGCAGATGTGGATAGGTTATGTGACAAGTTATATTTGCTGAAGTTTTTGAGTCGTGAGATTGAAATGTAATTGAGCTGTATATGTTCATTACAACACTGTCATTGTAATTTAATCAGTAATGATGATAGGTTACTAAACAGTGGGATGAATTAACTGCAATTATCTTTGTTATTGGTAGATGTCAATATGGAAAGATACCTATTTTGTGGGATTTCATTGGGTATGTTGTTGTATTGGCAGATATTTATTTGGTGTTGCTGCTTTGCGTTATTTGCCTCTTAATCTGATGTTTAGATGACAAAGTGATATTAATGTTTACTCAATCTAGATAACTAGAACATGTTTGCTGGAACAAGCTTATTGGTTGAGCTTGTGCAAGCCAGTTGCAATCCTTGTAGCTCTCCCTATGTCATTGTGCCAACTATTTTTTGTCATATTTCTATGAACTGCCCGTAATCCCTTCCTTTCCACTTAATACAGGTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTC-GAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATGGTACATCCTTGTCTTGACTGTGATTGCAGAAACTCATTTTTCATGCCCTAATTCAGTTTTTAGGTAGCTCTATCAGTTTGCTGTCAACCATTGGGCATTGGTTTTTTTCTTCTTCCAAATAGTCGTTAAAATGTTAGAAGGACTTGGATTTGATAACTCATTTCTCAATCATAATAGAGAAGAATATAAGAGGTGAACTTCCTATGAGAGTCTTTGGCCATAGATGTCATCTAGGCCAATTGAAGTGAGATACAGGAAATATAAGCCTATATTTAGTGTCACTTCATCTTTTTTGTCCTAACTAAATAGTTTTGTGTACTCCATACCTCAAGAAGTTATTTCAATGTAGGCACCTTTTTGGTTGCTTGGTTTGAAAGATTATCTTGCTCATATATTAACTGGCTAGAACTATGCCATTTCTCTCTTCTTTGTAACTAATGAATATTAGCAGGTGAAATTGCTCTGTTGGCTGATGTCTGTTCTTTTCTCAGGTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAA-GATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTG</genome_strand>
        <mrna_strand>CAAAATCGAAAATGGTTTTGTTGAAGCTTCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAAGCAAAGTTTGGCTTGATCCTAATGAATGCAATGAAATCTCCATGGCCAATTCCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCATGAAACCAACCAAAATTCACTCAGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAATAGGAAAGGCCGTCACTCTGGATATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGCGCAAAGGTACCAGGGATGCTATACTGCCTACCAAGGTGCTTTGTATGAGGAGATTGACAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAACTATTGACGAACACATGTATCATGACATGTACATGAAGGTGAAGGGCAATGTTTTCAAGAACAAGCGTGTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E469700" ref_strand="+" ref_description="SGN-E469700 [cSTB-13-D10]">
      <seq>tttaaaaaggtttcgttgaagctccaaaagcggctcgccgctagtgtgctcaagtgtggaagaggaaaagattggcttgaccctaatgaagggaatgaaagctccatggccaatgcccgtcgaaacatcaggaaattggttaaggatgggttcatcatcacgaaaccaaccaaaatgcactcaagatctcgtgctcgcagaatgaaggaggccaataggaaaggccggctctctggatatggttagcccaaaggtaccagggaggctagactgcctaccaaggtgcttaggatgaggagattgagagtcctcaggcgtttgcttcgcacgtatagggaatcaaagaagattgacaaacacatgtctcatgacatgtacatgaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="65243" stop="62615"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64946" g_stop="64829" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="118" r_length="118" r_score="0.907"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64828" i_stop="63671" i_length="1158">
            <donor d_prob="0.998" d_score="0.90"/>
            <acceptor a_prob="0.955" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63670" g_stop="63548" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="119" r_stop="241" r_length="123" r_score="0.927"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63547" i_stop="63057" i_length="491">
            <donor d_prob="0.909" d_score="0.92"/>
            <acceptor a_prob="0.975" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="63056" g_stop="62915" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="242" r_stop="383" r_length="142" r_score="0.965"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E469700" ref_strand="+">
        <total_alignment_score>0.935</total_alignment_score>
        <cumulative_length_of_scored_exons>383</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E469700" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64946" e_stop="64829"/>
          <exon e_start="63670" e_stop="63548"/>
          <exon e_start="63056" e_stop="62915"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCCGTATGTTTCTGTTTTCTGTTTGTTATCAATATCTATTTACGTTTATGCTATCTCTTTTAATCTCTTGTTTGTATGTTATGGCTTCTGATTGTGAAAGATCTATAGTAGGTTTTGATCAGTTTAGCTCCAACGATGCTTAGGTTATGTTACTTTATCGTTTCGCCGTCTTTTCTTGTGTGGAGTGTTTAATTTTGGAATTTGATCAACCGTAGTGTTGTTTTAACCACATATACTCTGATGTCGACCAGTTCAGATCCATAGAAGCATTGATTATTTGTGTTGAGGTTTTAGGTTTGGATTTTGATCAAACATTACAATGTTTCAACTGAATATACTGTTGAGGTATATTTTTGTCGTAGAGTTTGATCAGTTAAGCTCCAGTGTACCATAGATTAATTTACTGTTACTATCAATTTGCCTTTTGTTAGAGTTGCTGTTTTGAATTTGATCAGTATACTCCTTATGCATTGTTCACAAGATTAGCAGCATACTAATGTTTTTTTATTTATGTCTACTGTGTCAGCTTAGAGTGATATTTTTTAGGTTTTTGCATTGAAAACATATTTGTTTTTGGTAAACATGATTAACAAGGATGGTTGTTCTAGTGTTAAATGGATGCGAATAAACAATTATGCTGATTTTTTGGAAAACTGAAGATGTAGTGGATTGAAATTATTGGCAGATGTGGATAGGTTATGTGACAAGTTATATTTGCTGAAGTTTTTGAGTCGTGAGATTGAAATGTAATTGAGCTGTATATGTTCATTACAACACTGTCATTGTAATTTAATCAGTAATGATGATAGGTTACTAAACAGTGGGATGAATTAACTGCAATTATCTTTGTTATTGGTAGATGTCAATATGGAAAGATACCTATTTTGTGGGATTTCATTGGGTATGTTGTTGTATTGGCAGATATTTATTTGGTGTTGCTGCTTTGCGTTATTTGCCTCTTAATCTGATGTTTAGATGACAAAGTGATATTAATGTTTACTCAATCTAGATAACTAGAACATGTTTGCTGGAACAAGCTTATTGGTTGAGCTTGTGCAAGCCAGTTGCAATCCTTGTAGCTCTCCCTATGTCATTGTGCCAACTATTTTTTGTCATATTTCTATGAACTGCCCGTAATCCCTTCCTTTCCACTTAATACAGGTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATGGTACATCCTTGTCTTGACTGTGATTGCAGAAACTCATTTTTCATGCCCTAATTCAGTTTTTAGGTAGCTCTATCAGTTTGCTGTCAACCATTGGGCATTGGTTTTTTTCTTCTTCCAAATAGTCGTTAAAATGTTAGAAGGACTTGGATTTGATAACTCATTTCTCAATCATAATAGAGAAGAATATAAGAGGTGAACTTCCTATGAGAGTCTTTGGCCATAGATGTCATCTAGGCCAATTGAAGTGAGATACAGGAAATATAAGCCTATATTTAGTGTCACTTCATCTTTTTTGTCCTAACTAAATAGTTTTGTGTACTCCATACCTCAAGAAGTTATTTCAATGTAGGCACCTTTTTGGTTGCTTGGTTTGAAAGATTATCTTGCTCATATATTAACTGGCTAGAACTATGCCATTTCTCTCTTCTTTGTAACTAATGAATATTAGCAGGTGAAATTGCTCTGTTGGCTGATGTCTGTTCTTTTCTCAGGTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAA</genome_strand>
        <mrna_strand>TTTAAAAAGGTTTCGTTGAAGCTCCAAAAGCGGCTCGCCGCTAGTGTGCTCAAGTGTGGAAGAGGAAAAGATTGGCTTGACCCTAATGAAGGGAATGAAAGCTCCATGGCCAATGCCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGAAACATCAGGAAATTGGTTAAGGATGGGTTCATCATCACGAAACCAACCAAAATGCACTCAAGATCTCGTGCTCGCAGAATGAAGGAGGCCAATAGGAAAGGCCGGCTCTCTGGATATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTAGCCCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTAGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCACGTATAGGGAATCAAAGAAGATTGACAAACACATGTCTCATGACATGTACATGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E445426" ref_strand="+" ref_description="SGN-E445426 [cSTA-45-B17]">
      <seq>cagcttcacaaaatcgaaaatggtttcgttgaagctccagaagcggctcgccgctagtgtcctcaagtgtggaagaggaaaagtttggcttgatcctaatgaagggaatgaaatctccatggccaattcccgtcaaaacatcaggaaattggttaaggatggtttcatcatcaggaaaccaaccaaaattcactcaagatctcgtgctcgcagaatgaaggaggccaagaggaaaggccgtcactctggatatggttagcgcaaaggtaccagggaggctagactgcctaccaacgtgctttggatgaggagattgagagtcctcatgcgtttgcttcgcaagtttagggaatcaaagaagattgacaaacacatgtatcatgacatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="65259" stop="62623"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64959" g_stop="64829" g_length="131"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="131" r_length="131" r_score="0.985"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64828" i_stop="63671" i_length="1158">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.955" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63670" g_stop="63548" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="132" r_stop="254" r_length="123" r_score="0.984"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63547" i_stop="63057" i_length="491">
            <donor d_prob="0.909" d_score="0.98"/>
            <acceptor a_prob="0.975" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="63056" g_stop="62923" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="255" r_stop="388" r_length="134" r_score="0.970"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E445426" ref_strand="+">
        <total_alignment_score>0.979</total_alignment_score>
        <cumulative_length_of_scored_exons>388</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E445426" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64959" e_stop="64829"/>
          <exon e_start="63670" e_stop="63548"/>
          <exon e_start="63056" e_stop="62923"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGCTTCACAAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCCGTATGTTTCTGTTTTCTGTTTGTTATCAATATCTATTTACGTTTATGCTATCTCTTTTAATCTCTTGTTTGTATGTTATGGCTTCTGATTGTGAAAGATCTATAGTAGGTTTTGATCAGTTTAGCTCCAACGATGCTTAGGTTATGTTACTTTATCGTTTCGCCGTCTTTTCTTGTGTGGAGTGTTTAATTTTGGAATTTGATCAACCGTAGTGTTGTTTTAACCACATATACTCTGATGTCGACCAGTTCAGATCCATAGAAGCATTGATTATTTGTGTTGAGGTTTTAGGTTTGGATTTTGATCAAACATTACAATGTTTCAACTGAATATACTGTTGAGGTATATTTTTGTCGTAGAGTTTGATCAGTTAAGCTCCAGTGTACCATAGATTAATTTACTGTTACTATCAATTTGCCTTTTGTTAGAGTTGCTGTTTTGAATTTGATCAGTATACTCCTTATGCATTGTTCACAAGATTAGCAGCATACTAATGTTTTTTTATTTATGTCTACTGTGTCAGCTTAGAGTGATATTTTTTAGGTTTTTGCATTGAAAACATATTTGTTTTTGGTAAACATGATTAACAAGGATGGTTGTTCTAGTGTTAAATGGATGCGAATAAACAATTATGCTGATTTTTTGGAAAACTGAAGATGTAGTGGATTGAAATTATTGGCAGATGTGGATAGGTTATGTGACAAGTTATATTTGCTGAAGTTTTTGAGTCGTGAGATTGAAATGTAATTGAGCTGTATATGTTCATTACAACACTGTCATTGTAATTTAATCAGTAATGATGATAGGTTACTAAACAGTGGGATGAATTAACTGCAATTATCTTTGTTATTGGTAGATGTCAATATGGAAAGATACCTATTTTGTGGGATTTCATTGGGTATGTTGTTGTATTGGCAGATATTTATTTGGTGTTGCTGCTTTGCGTTATTTGCCTCTTAATCTGATGTTTAGATGACAAAGTGATATTAATGTTTACTCAATCTAGATAACTAGAACATGTTTGCTGGAACAAGCTTATTGGTTGAGCTTGTGCAAGCCAGTTGCAATCCTTGTAGCTCTCCCTATGTCATTGTGCCAACTATTTTTTGTCATATTTCTATGAACTGCCCGTAATCCCTTCCTTTCCACTTAATACAGGTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATGGTACATCCTTGTCTTGACTGTGATTGCAGAAACTCATTTTTCATGCCCTAATTCAGTTTTTAGGTAGCTCTATCAGTTTGCTGTCAACCATTGGGCATTGGTTTTTTTCTTCTTCCAAATAGTCGTTAAAATGTTAGAAGGACTTGGATTTGATAACTCATTTCTCAATCATAATAGAGAAGAATATAAGAGGTGAACTTCCTATGAGAGTCTTTGGCCATAGATGTCATCTAGGCCAATTGAAGTGAGATACAGGAAATATAAGCCTATATTTAGTGTCACTTCATCTTTTTTGTCCTAACTAAATAGTTTTGTGTACTCCATACCTCAAGAAGTTATTTCAATGTAGGCACCTTTTTGGTTGCTTGGTTTGAAAGATTATCTTGCTCATATATTAACTGGCTAGAACTATGCCATTTCTCTCTTCTTTGTAACTAATGAATATTAGCAGGTGAAATTGCTCTGTTGGCTGATGTCTGTTCTTTTCTCAGGTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATG</genome_strand>
        <mrna_strand>CAGCTTCACAAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGAAAAGTTTGGCTTGATCCTAATGAAGGGAATGAAATCTCCATGGCCAATTCCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCAAGATCTCGTGCTCGCAGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAACGTGCTTTGGATGAGGAGATTGAGAGTCCTCATGCGTTTGCTTCGCAAGTTTAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E338854" ref_strand="+" ref_description="SGN-E338854 [cTOE-21-K3]">
      <seq>atggtttcgttgaagctccagaagcggctcgccgctagtgtcctcaagtgtggaagacgcaaccttggctttggtcctaatgaaggcaatgaaatctgcatggccaattcccgtcaaaacatcaggaaattggttaaggatggtttcatcatcaggaaaccaaccaaaattcactcgagatctcgtgctcgccgaatgaaggaggccaagaggaaaggccgtcactctggatatggtaagcgcaaaggtaccagggaggctagactgcctaccaaggtgctttggatgaggagattgagagtcctcaggcgtttgcttcgcaagtatagggaatcaaagaagattgacaaacacatgtatcatgacatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="65240" stop="62623"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64940" g_stop="64829" g_length="112"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="112" r_length="112" r_score="0.929"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64828" i_stop="63671" i_length="1158">
            <donor d_prob="0.998" d_score="0.86"/>
            <acceptor a_prob="0.955" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63670" g_stop="63548" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="113" r_stop="235" r_length="123" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63547" i_stop="63057" i_length="491">
            <donor d_prob="0.909" d_score="1.00"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="63056" g_stop="62923" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="236" r_stop="369" r_length="134" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E338854" ref_strand="+">
        <total_alignment_score>0.978</total_alignment_score>
        <cumulative_length_of_scored_exons>369</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E338854" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64940" e_stop="64829"/>
          <exon e_start="63670" e_stop="63548"/>
          <exon e_start="63056" e_stop="62923"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCCGTATGTTTCTGTTTTCTGTTTGTTATCAATATCTATTTACGTTTATGCTATCTCTTTTAATCTCTTGTTTGTATGTTATGGCTTCTGATTGTGAAAGATCTATAGTAGGTTTTGATCAGTTTAGCTCCAACGATGCTTAGGTTATGTTACTTTATCGTTTCGCCGTCTTTTCTTGTGTGGAGTGTTTAATTTTGGAATTTGATCAACCGTAGTGTTGTTTTAACCACATATACTCTGATGTCGACCAGTTCAGATCCATAGAAGCATTGATTATTTGTGTTGAGGTTTTAGGTTTGGATTTTGATCAAACATTACAATGTTTCAACTGAATATACTGTTGAGGTATATTTTTGTCGTAGAGTTTGATCAGTTAAGCTCCAGTGTACCATAGATTAATTTACTGTTACTATCAATTTGCCTTTTGTTAGAGTTGCTGTTTTGAATTTGATCAGTATACTCCTTATGCATTGTTCACAAGATTAGCAGCATACTAATGTTTTTTTATTTATGTCTACTGTGTCAGCTTAGAGTGATATTTTTTAGGTTTTTGCATTGAAAACATATTTGTTTTTGGTAAACATGATTAACAAGGATGGTTGTTCTAGTGTTAAATGGATGCGAATAAACAATTATGCTGATTTTTTGGAAAACTGAAGATGTAGTGGATTGAAATTATTGGCAGATGTGGATAGGTTATGTGACAAGTTATATTTGCTGAAGTTTTTGAGTCGTGAGATTGAAATGTAATTGAGCTGTATATGTTCATTACAACACTGTCATTGTAATTTAATCAGTAATGATGATAGGTTACTAAACAGTGGGATGAATTAACTGCAATTATCTTTGTTATTGGTAGATGTCAATATGGAAAGATACCTATTTTGTGGGATTTCATTGGGTATGTTGTTGTATTGGCAGATATTTATTTGGTGTTGCTGCTTTGCGTTATTTGCCTCTTAATCTGATGTTTAGATGACAAAGTGATATTAATGTTTACTCAATCTAGATAACTAGAACATGTTTGCTGGAACAAGCTTATTGGTTGAGCTTGTGCAAGCCAGTTGCAATCCTTGTAGCTCTCCCTATGTCATTGTGCCAACTATTTTTTGTCATATTTCTATGAACTGCCCGTAATCCCTTCCTTTCCACTTAATACAGGTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATGGTACATCCTTGTCTTGACTGTGATTGCAGAAACTCATTTTTCATGCCCTAATTCAGTTTTTAGGTAGCTCTATCAGTTTGCTGTCAACCATTGGGCATTGGTTTTTTTCTTCTTCCAAATAGTCGTTAAAATGTTAGAAGGACTTGGATTTGATAACTCATTTCTCAATCATAATAGAGAAGAATATAAGAGGTGAACTTCCTATGAGAGTCTTTGGCCATAGATGTCATCTAGGCCAATTGAAGTGAGATACAGGAAATATAAGCCTATATTTAGTGTCACTTCATCTTTTTTGTCCTAACTAAATAGTTTTGTGTACTCCATACCTCAAGAAGTTATTTCAATGTAGGCACCTTTTTGGTTGCTTGGTTTGAAAGATTATCTTGCTCATATATTAACTGGCTAGAACTATGCCATTTCTCTCTTCTTTGTAACTAATGAATATTAGCAGGTGAAATTGCTCTGTTGGCTGATGTCTGTTCTTTTCTCAGGTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATG</genome_strand>
        <mrna_strand>ATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGACGCAACCTTGGCTTTGGTCCTAATGAAGGCAATGAAATCTGCATGGCCAATTCCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E468340" ref_strand="+" ref_description="SGN-E468340 [cSTB-3-I10]">
      <seq>gcttcacaaaatcgaaaatggtttcgttgaagctccagaagcgagtggccgctagtgtcctcaagtgcccaacaggaaaagtttggcttgatcctaatgaagggaatgaaatctccatggccaattcccgtcaaaacatcatgaaattggttaaggatggtttcatcatcaggaaaccaaccaaaattcactcaagatctcgtgctcgcagaatgaatgaggccaagatgaaaggccgtcactctggatatggtaagcgcaaaggtaccagggaggctagactgcctaccaaggtgctttggatgaggagattgagagtcctcacgcgtttgcttcgcaagtgtagggaatcaaagaagattgacaaacaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="65257" stop="62637"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64957" g_stop="64829" g_length="129"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="129" r_length="129" r_score="0.930"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64828" i_stop="63671" i_length="1158">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.955" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63670" g_stop="63548" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="130" r_stop="252" r_length="123" r_score="0.959"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63547" i_stop="63057" i_length="491">
            <donor d_prob="0.909" d_score="0.94"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="63056" g_stop="62937" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="253" r_stop="372" r_length="120" r_score="0.983"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E468340" ref_strand="+">
        <total_alignment_score>0.957</total_alignment_score>
        <cumulative_length_of_scored_exons>372</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E468340" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64957" e_stop="64829"/>
          <exon e_start="63670" e_stop="63548"/>
          <exon e_start="63056" e_stop="62937"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTTCACAAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCCGTATGTTTCTGTTTTCTGTTTGTTATCAATATCTATTTACGTTTATGCTATCTCTTTTAATCTCTTGTTTGTATGTTATGGCTTCTGATTGTGAAAGATCTATAGTAGGTTTTGATCAGTTTAGCTCCAACGATGCTTAGGTTATGTTACTTTATCGTTTCGCCGTCTTTTCTTGTGTGGAGTGTTTAATTTTGGAATTTGATCAACCGTAGTGTTGTTTTAACCACATATACTCTGATGTCGACCAGTTCAGATCCATAGAAGCATTGATTATTTGTGTTGAGGTTTTAGGTTTGGATTTTGATCAAACATTACAATGTTTCAACTGAATATACTGTTGAGGTATATTTTTGTCGTAGAGTTTGATCAGTTAAGCTCCAGTGTACCATAGATTAATTTACTGTTACTATCAATTTGCCTTTTGTTAGAGTTGCTGTTTTGAATTTGATCAGTATACTCCTTATGCATTGTTCACAAGATTAGCAGCATACTAATGTTTTTTTATTTATGTCTACTGTGTCAGCTTAGAGTGATATTTTTTAGGTTTTTGCATTGAAAACATATTTGTTTTTGGTAAACATGATTAACAAGGATGGTTGTTCTAGTGTTAAATGGATGCGAATAAACAATTATGCTGATTTTTTGGAAAACTGAAGATGTAGTGGATTGAAATTATTGGCAGATGTGGATAGGTTATGTGACAAGTTATATTTGCTGAAGTTTTTGAGTCGTGAGATTGAAATGTAATTGAGCTGTATATGTTCATTACAACACTGTCATTGTAATTTAATCAGTAATGATGATAGGTTACTAAACAGTGGGATGAATTAACTGCAATTATCTTTGTTATTGGTAGATGTCAATATGGAAAGATACCTATTTTGTGGGATTTCATTGGGTATGTTGTTGTATTGGCAGATATTTATTTGGTGTTGCTGCTTTGCGTTATTTGCCTCTTAATCTGATGTTTAGATGACAAAGTGATATTAATGTTTACTCAATCTAGATAACTAGAACATGTTTGCTGGAACAAGCTTATTGGTTGAGCTTGTGCAAGCCAGTTGCAATCCTTGTAGCTCTCCCTATGTCATTGTGCCAACTATTTTTTGTCATATTTCTATGAACTGCCCGTAATCCCTTCCTTTCCACTTAATACAGGTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATGGTACATCCTTGTCTTGACTGTGATTGCAGAAACTCATTTTTCATGCCCTAATTCAGTTTTTAGGTAGCTCTATCAGTTTGCTGTCAACCATTGGGCATTGGTTTTTTTCTTCTTCCAAATAGTCGTTAAAATGTTAGAAGGACTTGGATTTGATAACTCATTTCTCAATCATAATAGAGAAGAATATAAGAGGTGAACTTCCTATGAGAGTCTTTGGCCATAGATGTCATCTAGGCCAATTGAAGTGAGATACAGGAAATATAAGCCTATATTTAGTGTCACTTCATCTTTTTTGTCCTAACTAAATAGTTTTGTGTACTCCATACCTCAAGAAGTTATTTCAATGTAGGCACCTTTTTGGTTGCTTGGTTTGAAAGATTATCTTGCTCATATATTAACTGGCTAGAACTATGCCATTTCTCTCTTCTTTGTAACTAATGAATATTAGCAGGTGAAATTGCTCTGTTGGCTGATGTCTGTTCTTTTCTCAGGTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACA</genome_strand>
        <mrna_strand>GCTTCACAAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGAGTGGCCGCTAGTGTCCTCAAGTGCCCAACAGGAAAAGTTTGGCTTGATCCTAATGAAGGGAATGAAATCTCCATGGCCAATTCCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAAAACATCATGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCAAGATCTCGTGCTCGCAGAATGAATGAGGCCAAGATGAAAGGCCGTCACTCTGGATATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCACGCGTTTGCTTCGCAAGTGTAGGGAATCAAAGAAGATTGACAAACACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E560844" ref_strand="+" ref_description="SGN-E560844 [20561]">
      <seq>tcgaaaatggtttcgttgaagctccagaagcggctcgccgctagtgtcctcaagtgtggaagaggcaaagtttggcttgatcctaatgaggggaatgaaatctccatggccaattcccgccaaaacatcaggaaattggtgaaggatggtttcatcatcaggaaacaaccaaaattcactcaagatctcgtgctcgcagaatgaaggaggccaagaggaaagggcctgnntcactccctggatatggtaagcgcaaaggtaccagggaggctagactgcctaccaaggtgctttggatgaggagattgagagtcctcaggcgtttgcttcgcaagtat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="65246" stop="62665"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64946" g_stop="64829" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="118" r_length="118" r_score="0.983"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64828" i_stop="63671" i_length="1158">
            <donor d_prob="0.998" d_score="0.96"/>
            <acceptor a_prob="0.955" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63670" g_stop="63548" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="119" r_stop="246" r_length="128" r_score="0.862"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63547" i_stop="63057" i_length="491">
            <donor d_prob="0.909" d_score="0.70"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="63056" g_stop="62965" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="247" r_stop="338" r_length="92" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E560844" ref_strand="+">
        <total_alignment_score>0.943</total_alignment_score>
        <cumulative_length_of_scored_exons>333</cumulative_length_of_scored_exons>
        <coverage percentage="0.985" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E560844" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64946" e_stop="64829"/>
          <exon e_start="63670" e_stop="63548"/>
          <exon e_start="63056" e_stop="62965"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCCGTATGTTTCTGTTTTCTGTTTGTTATCAATATCTATTTACGTTTATGCTATCTCTTTTAATCTCTTGTTTGTATGTTATGGCTTCTGATTGTGAAAGATCTATAGTAGGTTTTGATCAGTTTAGCTCCAACGATGCTTAGGTTATGTTACTTTATCGTTTCGCCGTCTTTTCTTGTGTGGAGTGTTTAATTTTGGAATTTGATCAACCGTAGTGTTGTTTTAACCACATATACTCTGATGTCGACCAGTTCAGATCCATAGAAGCATTGATTATTTGTGTTGAGGTTTTAGGTTTGGATTTTGATCAAACATTACAATGTTTCAACTGAATATACTGTTGAGGTATATTTTTGTCGTAGAGTTTGATCAGTTAAGCTCCAGTGTACCATAGATTAATTTACTGTTACTATCAATTTGCCTTTTGTTAGAGTTGCTGTTTTGAATTTGATCAGTATACTCCTTATGCATTGTTCACAAGATTAGCAGCATACTAATGTTTTTTTATTTATGTCTACTGTGTCAGCTTAGAGTGATATTTTTTAGGTTTTTGCATTGAAAACATATTTGTTTTTGGTAAACATGATTAACAAGGATGGTTGTTCTAGTGTTAAATGGATGCGAATAAACAATTATGCTGATTTTTTGGAAAACTGAAGATGTAGTGGATTGAAATTATTGGCAGATGTGGATAGGTTATGTGACAAGTTATATTTGCTGAAGTTTTTGAGTCGTGAGATTGAAATGTAATTGAGCTGTATATGTTCATTACAACACTGTCATTGTAATTTAATCAGTAATGATGATAGGTTACTAAACAGTGGGATGAATTAACTGCAATTATCTTTGTTATTGGTAGATGTCAATATGGAAAGATACCTATTTTGTGGGATTTCATTGGGTATGTTGTTGTATTGGCAGATATTTATTTGGTGTTGCTGCTTTGCGTTATTTGCCTCTTAATCTGATGTTTAGATGACAAAGTGATATTAATGTTTACTCAATCTAGATAACTAGAACATGTTTGCTGGAACAAGCTTATTGGTTGAGCTTGTGCAAGCCAGTTGCAATCCTTGTAGCTCTCCCTATGTCATTGTGCCAACTATTTTTTGTCATATTTCTATGAACTGCCCGTAATCCCTTCCTTTCCACTTAATACAGGTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAA-GGCC-G--TCACT--CTGGATATGGTACATCCTTGTCTTGACTGTGATTGCAGAAACTCATTTTTCATGCCCTAATTCAGTTTTTAGGTAGCTCTATCAGTTTGCTGTCAACCATTGGGCATTGGTTTTTTTCTTCTTCCAAATAGTCGTTAAAATGTTAGAAGGACTTGGATTTGATAACTCATTTCTCAATCATAATAGAGAAGAATATAAGAGGTGAACTTCCTATGAGAGTCTTTGGCCATAGATGTCATCTAGGCCAATTGAAGTGAGATACAGGAAATATAAGCCTATATTTAGTGTCACTTCATCTTTTTTGTCCTAACTAAATAGTTTTGTGTACTCCATACCTCAAGAAGTTATTTCAATGTAGGCACCTTTTTGGTTGCTTGGTTTGAAAGATTATCTTGCTCATATATTAACTGGCTAGAACTATGCCATTTCTCTCTTCTTTGTAACTAATGAATATTAGCAGGTGAAATTGCTCTGTTGGCTGATGTCTGTTCTTTTCTCAGGTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTAT</genome_strand>
        <mrna_strand>TCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAGGGGAATGAAATCTCCATGGCCAATTCCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCAAAACATCAGGAAATTGGTGAAGGATGGTTTCATCATCAGGAAA-CAACCAAAATTCACTCAAGATCTCGTGCTCGCAGAATGAAGGAGGCCAAGAGGAAAGGGCCTGNNTCACTCCCTGGATATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E403625" ref_strand="+" ref_description="SGN-E403625 [PPC-11-O23]">
      <seq>aaaatggtttcgttgaagctccagaagcggctctccgctagtgtcctcttttgtggaagaggaaaagtttggcttgatcctaatgaagggaatgaaatctccatggccaattcccgtcaaaacatcaggaaattggttaaggatggtttcatcatcaggaaaccaaccaaaattcactcaagatctcgtgctcgcagaatgaaggaggccaagaggaaaggccgtcactctggatatggtaagcgcaaaggtaccagggaggctagactgcctaccaaggagctttggatgaggagattg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="65243" stop="62695"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64943" g_stop="64829" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="115" r_length="115" r_score="0.948"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64828" i_stop="63671" i_length="1158">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.955" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63670" g_stop="63548" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="116" r_stop="238" r_length="123" r_score="0.984"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63547" i_stop="63057" i_length="491">
            <donor d_prob="0.909" d_score="0.98"/>
            <acceptor a_prob="0.975" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="63056" g_stop="62995" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="239" r_stop="300" r_length="62" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E403625" ref_strand="+">
        <total_alignment_score>0.970</total_alignment_score>
        <cumulative_length_of_scored_exons>300</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E403625" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64943" e_stop="64829"/>
          <exon e_start="63670" e_stop="63548"/>
          <exon e_start="63056" e_stop="62995"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCCGTATGTTTCTGTTTTCTGTTTGTTATCAATATCTATTTACGTTTATGCTATCTCTTTTAATCTCTTGTTTGTATGTTATGGCTTCTGATTGTGAAAGATCTATAGTAGGTTTTGATCAGTTTAGCTCCAACGATGCTTAGGTTATGTTACTTTATCGTTTCGCCGTCTTTTCTTGTGTGGAGTGTTTAATTTTGGAATTTGATCAACCGTAGTGTTGTTTTAACCACATATACTCTGATGTCGACCAGTTCAGATCCATAGAAGCATTGATTATTTGTGTTGAGGTTTTAGGTTTGGATTTTGATCAAACATTACAATGTTTCAACTGAATATACTGTTGAGGTATATTTTTGTCGTAGAGTTTGATCAGTTAAGCTCCAGTGTACCATAGATTAATTTACTGTTACTATCAATTTGCCTTTTGTTAGAGTTGCTGTTTTGAATTTGATCAGTATACTCCTTATGCATTGTTCACAAGATTAGCAGCATACTAATGTTTTTTTATTTATGTCTACTGTGTCAGCTTAGAGTGATATTTTTTAGGTTTTTGCATTGAAAACATATTTGTTTTTGGTAAACATGATTAACAAGGATGGTTGTTCTAGTGTTAAATGGATGCGAATAAACAATTATGCTGATTTTTTGGAAAACTGAAGATGTAGTGGATTGAAATTATTGGCAGATGTGGATAGGTTATGTGACAAGTTATATTTGCTGAAGTTTTTGAGTCGTGAGATTGAAATGTAATTGAGCTGTATATGTTCATTACAACACTGTCATTGTAATTTAATCAGTAATGATGATAGGTTACTAAACAGTGGGATGAATTAACTGCAATTATCTTTGTTATTGGTAGATGTCAATATGGAAAGATACCTATTTTGTGGGATTTCATTGGGTATGTTGTTGTATTGGCAGATATTTATTTGGTGTTGCTGCTTTGCGTTATTTGCCTCTTAATCTGATGTTTAGATGACAAAGTGATATTAATGTTTACTCAATCTAGATAACTAGAACATGTTTGCTGGAACAAGCTTATTGGTTGAGCTTGTGCAAGCCAGTTGCAATCCTTGTAGCTCTCCCTATGTCATTGTGCCAACTATTTTTTGTCATATTTCTATGAACTGCCCGTAATCCCTTCCTTTCCACTTAATACAGGTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATGGTACATCCTTGTCTTGACTGTGATTGCAGAAACTCATTTTTCATGCCCTAATTCAGTTTTTAGGTAGCTCTATCAGTTTGCTGTCAACCATTGGGCATTGGTTTTTTTCTTCTTCCAAATAGTCGTTAAAATGTTAGAAGGACTTGGATTTGATAACTCATTTCTCAATCATAATAGAGAAGAATATAAGAGGTGAACTTCCTATGAGAGTCTTTGGCCATAGATGTCATCTAGGCCAATTGAAGTGAGATACAGGAAATATAAGCCTATATTTAGTGTCACTTCATCTTTTTTGTCCTAACTAAATAGTTTTGTGTACTCCATACCTCAAGAAGTTATTTCAATGTAGGCACCTTTTTGGTTGCTTGGTTTGAAAGATTATCTTGCTCATATATTAACTGGCTAGAACTATGCCATTTCTCTCTTCTTTGTAACTAATGAATATTAGCAGGTGAAATTGCTCTGTTGGCTGATGTCTGTTCTTTTCTCAGGTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTG</genome_strand>
        <mrna_strand>AAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCTCCGCTAGTGTCCTCTTTTGTGGAAGAGGAAAAGTTTGGCTTGATCCTAATGAAGGGAATGAAATCTCCATGGCCAATTCCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCAAGATCTCGTGCTCGCAGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGAGCTTTGGATGAGGAGATTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E281571" ref_strand="-" ref_description="SGN-E281571 [cLEL-1-J14](-)">
      <seq>gcacgagcaaaatcgaaaatggtttcgttgaagctccagaagcggctcgccgctagtgtcctcaagtgtggaagacgcaaagtttggcttgatcctaatgaaggcaatgaaatctccatggccaattcccgtcaaaacatcaggaaattggttaaggatggtttcatcatcaggaaaccaaccaaaattcactcgagatctcgtgctcgccgaatgaaggaggccaagaggaaaggccgtcactctggatatggtaagcg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="65251" stop="63241"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64960" g_stop="64829" g_length="132"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="130" r_length="130" r_score="0.955"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64828" i_stop="63671" i_length="1158">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.955" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63670" g_stop="63548" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="131" r_stop="253" r_length="123" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E281571" ref_strand="-">
        <total_alignment_score>0.976</total_alignment_score>
        <cumulative_length_of_scored_exons>255</cumulative_length_of_scored_exons>
        <coverage percentage="0.981" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E281571" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="64960" e_stop="64829"/>
          <exon e_start="63670" e_stop="63548"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAGCTTCACAAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCCGTATGTTTCTGTTTTCTGTTTGTTATCAATATCTATTTACGTTTATGCTATCTCTTTTAATCTCTTGTTTGTATGTTATGGCTTCTGATTGTGAAAGATCTATAGTAGGTTTTGATCAGTTTAGCTCCAACGATGCTTAGGTTATGTTACTTTATCGTTTCGCCGTCTTTTCTTGTGTGGAGTGTTTAATTTTGGAATTTGATCAACCGTAGTGTTGTTTTAACCACATATACTCTGATGTCGACCAGTTCAGATCCATAGAAGCATTGATTATTTGTGTTGAGGTTTTAGGTTTGGATTTTGATCAAACATTACAATGTTTCAACTGAATATACTGTTGAGGTATATTTTTGTCGTAGAGTTTGATCAGTTAAGCTCCAGTGTACCATAGATTAATTTACTGTTACTATCAATTTGCCTTTTGTTAGAGTTGCTGTTTTGAATTTGATCAGTATACTCCTTATGCATTGTTCACAAGATTAGCAGCATACTAATGTTTTTTTATTTATGTCTACTGTGTCAGCTTAGAGTGATATTTTTTAGGTTTTTGCATTGAAAACATATTTGTTTTTGGTAAACATGATTAACAAGGATGGTTGTTCTAGTGTTAAATGGATGCGAATAAACAATTATGCTGATTTTTTGGAAAACTGAAGATGTAGTGGATTGAAATTATTGGCAGATGTGGATAGGTTATGTGACAAGTTATATTTGCTGAAGTTTTTGAGTCGTGAGATTGAAATGTAATTGAGCTGTATATGTTCATTACAACACTGTCATTGTAATTTAATCAGTAATGATGATAGGTTACTAAACAGTGGGATGAATTAACTGCAATTATCTTTGTTATTGGTAGATGTCAATATGGAAAGATACCTATTTTGTGGGATTTCATTGGGTATGTTGTTGTATTGGCAGATATTTATTTGGTGTTGCTGCTTTGCGTTATTTGCCTCTTAATCTGATGTTTAGATGACAAAGTGATATTAATGTTTACTCAATCTAGATAACTAGAACATGTTTGCTGGAACAAGCTTATTGGTTGAGCTTGTGCAAGCCAGTTGCAATCCTTGTAGCTCTCCCTATGTCATTGTGCCAACTATTTTTTGTCATATTTCTATGAACTGCCCGTAATCCCTTCCTTTCCACTTAATACAGGTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATG</genome_strand>
        <mrna_strand>GCA-C-GAGCAAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGACGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E303989" ref_strand="+" ref_description="SGN-E303989 [cLEX-4-P22]">
      <seq>cttcacaaaatcgaaaatggtttcgttgaagctccagaagcggctcgccgctagtgtcctcaagtgtggaagaggcaaagtttggcttgatcctaatgaaggcaatgaaatctccatggccaattcccgtcaaaacatcaagaaattggttaaggatggtttcatcatcaggaaaccaaccaaaattcactcgagatctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="65256" stop="63299"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64956" g_stop="64829" g_length="128"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="128" r_length="128" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64828" i_stop="63671" i_length="1158">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.955" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63670" g_stop="63599" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="129" r_stop="200" r_length="72" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E303989" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>200</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E303989" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64956" e_stop="64829"/>
          <exon e_start="63670" e_stop="63599"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTCACAAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCCGTATGTTTCTGTTTTCTGTTTGTTATCAATATCTATTTACGTTTATGCTATCTCTTTTAATCTCTTGTTTGTATGTTATGGCTTCTGATTGTGAAAGATCTATAGTAGGTTTTGATCAGTTTAGCTCCAACGATGCTTAGGTTATGTTACTTTATCGTTTCGCCGTCTTTTCTTGTGTGGAGTGTTTAATTTTGGAATTTGATCAACCGTAGTGTTGTTTTAACCACATATACTCTGATGTCGACCAGTTCAGATCCATAGAAGCATTGATTATTTGTGTTGAGGTTTTAGGTTTGGATTTTGATCAAACATTACAATGTTTCAACTGAATATACTGTTGAGGTATATTTTTGTCGTAGAGTTTGATCAGTTAAGCTCCAGTGTACCATAGATTAATTTACTGTTACTATCAATTTGCCTTTTGTTAGAGTTGCTGTTTTGAATTTGATCAGTATACTCCTTATGCATTGTTCACAAGATTAGCAGCATACTAATGTTTTTTTATTTATGTCTACTGTGTCAGCTTAGAGTGATATTTTTTAGGTTTTTGCATTGAAAACATATTTGTTTTTGGTAAACATGATTAACAAGGATGGTTGTTCTAGTGTTAAATGGATGCGAATAAACAATTATGCTGATTTTTTGGAAAACTGAAGATGTAGTGGATTGAAATTATTGGCAGATGTGGATAGGTTATGTGACAAGTTATATTTGCTGAAGTTTTTGAGTCGTGAGATTGAAATGTAATTGAGCTGTATATGTTCATTACAACACTGTCATTGTAATTTAATCAGTAATGATGATAGGTTACTAAACAGTGGGATGAATTAACTGCAATTATCTTTGTTATTGGTAGATGTCAATATGGAAAGATACCTATTTTGTGGGATTTCATTGGGTATGTTGTTGTATTGGCAGATATTTATTTGGTGTTGCTGCTTTGCGTTATTTGCCTCTTAATCTGATGTTTAGATGACAAAGTGATATTAATGTTTACTCAATCTAGATAACTAGAACATGTTTGCTGGAACAAGCTTATTGGTTGAGCTTGTGCAAGCCAGTTGCAATCCTTGTAGCTCTCCCTATGTCATTGTGCCAACTATTTTTTGTCATATTTCTATGAACTGCCCGTAATCCCTTCCTTTCCACTTAATACAGGTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTC</genome_strand>
        <mrna_strand>CTTCACAAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAAAACATCAAGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E200845" ref_strand="+" ref_description="SGN-E200845 [cLEC-5-G3]">
      <seq>aaaatgtatgtatattgcataattataagtgtatggcaagaatatatatgtttttgtctcgctttatacaaaaacaaaaacacaatatatacacttctgttgtataaagttagagaaaattgtatttcactgcaattatataattcacaattgtataattcgttggcctttttctctgcaatatttgaagtaaaatgtttgtaatttgtataattaagtgtataacacgaagatatatatttttacatgtgtatatacaattttctctcgctttatacaaaatagaaacagaatttatacacttctgtgtatatagcgagataggcgagcgagaatggagagtggcgagcgagatttttgggagggagacgcctgacaaactttagctaacgtttgctatggagcacaattaaatcaaactctagctactccatttagttagattactag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="67291" stop="66245"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="66991" g_stop="66545" g_length="447"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="450" r_length="450" r_score="0.922"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E200845" ref_strand="+">
        <total_alignment_score>0.922</total_alignment_score>
        <cumulative_length_of_scored_exons>447</cumulative_length_of_scored_exons>
        <coverage percentage="0.993" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E200845" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="66991" e_stop="66545"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAATGTATGTATATTGCATAATTATAAGTGTATAGCAAGAAGATATATG-TTTT-TCTCACTGTATACAAAAACAGAAACACAATATATACACTTCTGTTATATAAAGCTAGAGAAAATTGTATTTCACTGCAATTGTATAATTCACAATTGTATAATTCGTTGCCCTTTTTCTCTGCAATATTTGAAGTAAAATGTTTGTAAATTGTATAATTAAGTGTATAACACAAAGATATACATTTTTGCATGTGTATATACAATTTTCTCTCGCTTTATACAAAACAGAAACAGAA-TTATACACTTCTGTGTATAAAGCGAGAGAGGCGAGCGAGAATGGAGAGTGGCGAGCGAGATTTTTGGGAGAGAGACG-CTGGCAAATTTTAGCTAATGTTTGCTATGGAGCACAATTAAATCAAACCCTAGCTATTTCATTTAATTTAGGTTATTAG</genome_strand>
        <mrna_strand>AAAATGTATGTATATTGCATAATTATAAGTGTATGGCAAGAATATATATGTTTTTGTCTCGCTTTATACAAAAACAAAAACACAATATATACACTTCTGTTGTATAAAGTTAGAGAAAATTGTATTTCACTGCAATTATATAATTCACAATTGTATAATTCGTTGGCCTTTTTCTCTGCAATATTTGAAGTAAAATGTTTGTAATTTGTATAATTAAGTGTATAACACGAAGATATATATTTTTACATGTGTATATACAATTTTCTCTCGCTTTATACAAAATAGAAACAGAATTTATACACTTCTGTGTATATAGCGAGATAGGCGAGCGAGAATGGAGAGTGGCGAGCGAGATTTTTGGGAGGGAGACGCCTGACAAACTTTAGCTAACGTTTGCTATGGAGCACAATTAAATCAAACTCTAGCTACTCCATTT-AGTTAGATTACTAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E393076" ref_strand="+" ref_description="SGN-E393076 [TUS-37-J4]">
      <seq>taaaatgtatgtatattgcataattataagtgtatggcaagaatatatatgtttttgtctcgctttatacaaaaacaaaaacacaatatatacacttctgttgtataaagttagagaaaattgtatttcactgcaattatataattcacaattgtataattcgttggcctttttctctgcaatatttgaagtaaaatgtttgtaatttgtataattaagtgtataacacgaagatatatatttttacatgtgtatatacaattttctctcgctttatacaaaataaaaacagaatttatttttttttgtgtatatagcgagatag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="67292" stop="66397"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="66992" g_stop="66671" g_length="322"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="325" r_length="325" r_score="0.913"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E393076" ref_strand="+">
        <total_alignment_score>0.913</total_alignment_score>
        <cumulative_length_of_scored_exons>322</cumulative_length_of_scored_exons>
        <coverage percentage="0.991" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E393076" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="66992" e_stop="66671"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAAAATGTATGTATATTGCATAATTATAAGTGTATAGCAAGAAGATATATG-TTTT-TCTCACTGTATACAAAAACAGAAACACAATATATACACTTCTGTTATATAAAGCTAGAGAAAATTGTATTTCACTGCAATTGTATAATTCACAATTGTATAATTCGTTGCCCTTTTTCTCTGCAATATTTGAAGTAAAATGTTTGTAAATTGTATAATTAAGTGTATAACACAAAGATATACATTTTTGCATGTGTATATACAATTTTCTCTCGCTTTATACAAAACAGAAACAGAA-TTATACACTTCTGTGTATAAAGCGAGAGAG</genome_strand>
        <mrna_strand>TAAAATGTATGTATATTGCATAATTATAAGTGTATGGCAAGAATATATATGTTTTTGTCTCGCTTTATACAAAAACAAAAACACAATATATACACTTCTGTTGTATAAAGTTAGAGAAAATTGTATTTCACTGCAATTATATAATTCACAATTGTATAATTCGTTGGCCTTTTTCTCTGCAATATTTGAAGTAAAATGTTTGTAATTTGTATAATTAAGTGTATAACACGAAGATATATATTTTTACATGTGTATATACAATTTTCTCTCGCTTTATACAAAATAAAAACAGAATTTATTTTTTTTTGTGTATATAGCGAGATAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E393075" ref_strand="+" ref_description="SGN-E393075 [TUS-37-J2]">
      <seq>taaaatgtatgtatattgcataattataagtgtatggcaagaatatatatgtttttgtctcgctttatacaaaaacaaaaacacaatatatacacttctgttgtataaagttagagaaaattgtatttcactgcaattatataattcacaattgtataattcgttggcctttttctctgcaatatttgaagtaaaatgtttgtaatttgtataattaagtgtataacacgaagatatatatttttacatgtgtatatacaattttctctcgctttatacaaaatagaaacagaggttttttttttttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="67292" stop="66397"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="66992" g_stop="66702" g_length="291"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="293" r_length="293" r_score="0.938"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E393075" ref_strand="+">
        <total_alignment_score>0.938</total_alignment_score>
        <cumulative_length_of_scored_exons>291</cumulative_length_of_scored_exons>
        <coverage percentage="0.945" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E393075" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="66992" e_stop="66702"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAAAATGTATGTATATTGCATAATTATAAGTGTATAGCAAGAAGATATATG-TTTT-TCTCACTGTATACAAAAACAGAAACACAATATATACACTTCTGTTATATAAAGCTAGAGAAAATTGTATTTCACTGCAATTGTATAATTCACAATTGTATAATTCGTTGCCCTTTTTCTCTGCAATATTTGAAGTAAAATGTTTGTAAATTGTATAATTAAGTGTATAACACAAAGATATACATTTTTGCATGTGTATATACAATTTTCTCTCGCTTTATACAAAACAGAAACAGA</genome_strand>
        <mrna_strand>TAAAATGTATGTATATTGCATAATTATAAGTGTATGGCAAGAATATATATGTTTTTGTCTCGCTTTATACAAAAACAAAAACACAATATATACACTTCTGTTGTATAAAGTTAGAGAAAATTGTATTTCACTGCAATTATATAATTCACAATTGTATAATTCGTTGGCCTTTTTCTCTGCAATATTTGAAGTAAAATGTTTGTAATTTGTATAATTAAGTGTATAACACGAAGATATATATTTTTACATGTGTATATACAATTTTCTCTCGCTTTATACAAAATAGAAACAGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E747280" ref_strand="+" ref_description="SGN-E747280 [GI|47104682]">
      <seq>ttaatttctcacttttttttcttctttatttttattttttcaatttcctatttaggccacaaccacaatggctattccaaaaggattagaaatcaataatattgtaggattattcttacttttgggtatagccattttatcatcaaaagttgcagaatgtgcaccttttggttcgcgtcgtggccttatggagacagttttcgatgttaccaagcacggagctagaccagatcccactgcagatagcactcggggatttatgatggcatggagagcagcatgtcaatcaacaggcccagcaaaaattgttattccaccaggaacatttactacaggagaaactatttttcaaggcccatgtacatgtccaaagcccattattattgaaattcaagggacagtattgtcaaatacagacataagtttgtactcacgtgcctcgtggatatccctcgaacacgtggacggtgtcgttattacaggtggcggaactctaaacggacaaggaaatgccagctggcagtatgctgacaaatccggaagcgctcctcctctccctatctctcttgtatttcaaactgtgaagagttcttccatcaatggcataaattttgtggattccaaaggtgtccatttgaaaattactgatagtaatgacattacagtttcaaaaatcaagattacagcaccagcaacaagtccaaatactgatggaattcatataagtgaaacaattaatatcaatgttactgatagcaacattgggacaggtgatgattgcattagtgttggacatggtactaccaatatttttgtcaataatattcattgtggccctggacatggaataagcattggaagccttggaaagagaccagatgagaaggatgttacaaaagtttatataaaaaattgtacattccacagtacaacaaatggtgcaagaatcaagacttatatggattcatctccactacaagtttctgatgttgtttatgaagatattgttttggaggatgttaaaaatccaattcttattgatcaacactataattccaagaacaaggttgagccatcaaaagtgaaactaaaagatattcacttcaagaacataagggggacaacaaattcaaaagctccagtatcacttaattgcagtgaagcagctccatgtgaaggagttgaattggctgatatcaatatagctccatctggtacaactggacctctacaaggagcaacatgtcaaaatgccaagacagtattcaatggaaaaactaatgttccagcatgtaaataattacattacattattaatcaaatcatgtccatatgaagtatgtgtataaatttcaatataaccatgtaattttgtttatggtttattataatatttatttaattttttttcgatgcctggaaatagaaaaaaaaagataaaatttagcgcttgacgcatattagctacggatgtagctagttagggttagtttcttagctaaatacatgcatgtgttcttgtgtatccacataatttatttatggttaattacgatatttttctttttaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="70850" stop="67256"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="70550" g_stop="70298" g_length="253"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="253" r_length="253" r_score="0.988"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="70297" i_stop="70191" i_length="107">
            <donor d_prob="0.981" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="70190" g_stop="69882" g_length="309"/>
          <reference_exon_boundary r_type="cDNA" r_start="254" r_stop="562" r_length="309" r_score="0.974"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="69881" i_stop="69798" i_length="84">
            <donor d_prob="0.999" d_score="0.88"/>
            <acceptor a_prob="0.131" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="69797" g_stop="69508" g_length="290"/>
          <reference_exon_boundary r_type="cDNA" r_start="563" r_stop="852" r_length="290" r_score="0.997"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="69507" i_stop="69370" i_length="138">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="69369" g_stop="69150" g_length="220"/>
          <reference_exon_boundary r_type="cDNA" r_start="853" r_stop="1072" r_length="220" r_score="0.991"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="69149" i_stop="68095" i_length="1055">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="68094" g_stop="67685" g_length="410"/>
          <reference_exon_boundary r_type="cDNA" r_start="1073" r_stop="1473" r_length="401" r_score="0.956"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="67684" i_stop="67492" i_length="193">
            <donor d_prob="0.003" d_score="0.86"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="67491" g_stop="67460" g_length="32"/>
          <reference_exon_boundary r_type="cDNA" r_start="1474" r_stop="1504" r_length="31" r_score="0.719"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="1569" polyA_stop="1585"/>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E747280" ref_strand="+">
        <total_alignment_score>0.978</total_alignment_score>
        <cumulative_length_of_scored_exons>1514</cumulative_length_of_scored_exons>
        <coverage percentage="0.955" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E747280" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="70550" e_stop="70298"/>
          <exon e_start="70190" e_stop="69882"/>
          <exon e_start="69797" e_stop="69508"/>
          <exon e_start="69369" e_stop="69150"/>
          <exon e_start="68094" e_stop="67685"/>
          <exon e_start="67491" e_stop="67460"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTAATTTCTCACTTTTT-TTCTTCTTTATTTTTATTTTTTTCAATTTCCTATTTAGGCCACAACCACAATGGCTATTCCAAAAGGATTAGAAATCAATAATATTGTAGGATTATTCTTACTTTTGGGTATAGCCATTTTATCATCAAAAGTTGCAGAATGTGCACCTTTTGGTTCGCGTCGTGGCCTTATGGAGACAGTTTTCGATGTTACCAAGCACGGAGCTAGACCAGATCCCACTGCAGATAGCACTCGGGTAAAACCCAAACTTATATTTAAATTTCTAGCTCTGCGCACTCTGCCGTAAAGCCAAAAATAAATTGGAGGCCTAACTTTTTTCTTTTTTGTTGTTGGTTTTAATAGGGATTTATGATGGCATGGAGAGCAGCATGTCAATCAACAGGCCCAGCAAAAGTTGTTATTCCACCAGGAACATTTACTACAGGAGAAACTATTTTTCAAGGCCCATGTACATGTCCAAAGCCCATTATTATTGAAATTCAAGGGACAGTATTGTCAAATACAGACATAAGTTTGTACTCACGTGCCTCATGGATATCCCTCGAACACGTGGACGGTGTCGTTATTACAGGTGGCGGAACTCTAAACGGACAAGGAAATGCCAGCTGGCAGTATGCTGACAAAAGCGGAAACTCTCCTCCTCTCCCTACGGTAAGTACAGATGATCACTCAATTTATAGTTGCTCGCTCTTCACTATTAAAAGTTATTAATTATTATTATATTTGTGTGTGTAGTCTCTTGTATTTCAAACTGTGAAGAGTTCTTCCATCAATGGCATAAATTTTGTGGATTCCAAAGGTGTCCATTTGAAAGTTACTGATAGTAATGACATTACAGTTTCAAAAATCAAGATTACAGCACCAGCAACAAGTCCAAATACTGATGGAATTCATATAAGTGAAACAATTAATATCAATGTTACTGATAGCAACATTGGGACAGGTGATGATTGCATTAGTGTTGGACATGGTACTACCAATATTTTTGTCAATAATATTCATTGTGGCCCTGGACATGGAATAAGGTTAGTTTTTTAATTAATAATGATCTTTTCATAGTGTTAAAATAGAAAATCATCAAGAATTGAGGGATTAAATGTACTACTAGCCTTTTCAAAAAAATGTAGGCATTTAAAGATTCTAAATGTAGTTTTTTTGTGCAGTATTGGAAGCCTTGGAAAGAGACCAGATGAGAAGGATGTTACAAAAGTTTATATAAAAAATTGTACATTCCACAGTACAACAAATGGTGCAAGAATCAAGACTTATATGGATTCATCTCCACTACAAGTTTCTGATGTTGTTTATGAAGATATTGTCTTGGAGGATGTTAAAAATCCAATTCTTATTGATCAACACTATAATTCCAAGAACAAGGTTGAGGTAAAGTTATCATAACTACTTTTTACTAACTAATTACTCGACACTAAGGGGGAAAAGGGTCTGATATACCCCCTCAACTTTGTCATTTAGAGCTGATATACTCCTCGTTATAAAAGTGGCTCATATATAAGTTTTAATCTAAGTTTTTATTATTTTTTTCTAAAAAATATAATTCCATATAAATAAATTTAATCCTCGTCAAACTTATTTTTTTAGACTTTTTTTTGTTTCAATGACTAATTTATAATTATTATTTTGATAATCAAATTTATTTATGTTTCACTAATATTCTTGTAAAACTTATTATAGATGACCAAATTTTTTCTTCGAATACGAAATTAAATTACAATACGCACAAAAAAATAGTTTAAATTTTTTTCCTTTAAACTAAGGAATGAAAGAAAAAAACATAATAAGAATAAGAAACCCAAATAATTATAATAAAAGAAGTCAAAAAATAATTTATGTATGAAAAAAATTAAAATATACCTTGAACTTTGATAGAAGAATCATATATATCTCTAAATAATTTTTAAAAAAAAATTAGAAGTAACAAATATAAATTTAAAACTAATTTTTTAACTTCCGTTAAATGAAGGGTATATGTGAGCCATGTTTGTGACGACAGGGGTATATGTGAGCCGTTTTTATAACGGTAAGGACATATATGAGTCACTTTTATAACGAAGGGTATATCAGCTCCAAATGACAAAATTGAGGGATATATCAGACCCTTTTCCCTTTTTTTAATATTCAGGCCTTGCTCGACAGAGTTAATTAATTACTCCATACCTATGTCAATGAGAGATAACAAGTACCTCAAGTTCTATTTAGGACAATAGTGTTAAGATCACCATGAATTGAAATACTAATACAATTTTAAATTGTGATTTTTTCGACTGATCCAAACCTTACTAAGCGGAGTTAGATGAGAGATGATAAATATCATGGTAAGCTATTAGTATATGATCGTAACACATGGATTTGAGTTAATATTACTAGTTTTTTTTTTAGATCAATTTCACTTATACATTATTATATTTTGTTTGGTATAGCCATCAAAAGTGAAACTAAAAGATATTCACTTCAAGAACATAAGGGGGACAACAAATACAAAAGCTCCAGTATCACTTAATTGCAGTGAAGCAGCTCCATGTGAAGGAGTTGAATTGGCTGATATTGATATAGCTCCATCTGGTACAACTGGACCTCTACAAGGAGCAACATGTCAAAATGCCAAGACAGTATTCAATGGAAAAACTAATGTTCCAGCATGTAAATAATTACATTACATTATTAATCAAATCATGTCCATATGAAAAAATGTGTATAAATTTCAATATAACCATGTAATTTTGTTTATGGTTTATTATAATATTTATTTATATTTTTTTTTTCGATGCCTGGAAATAGAAAAAAAAGAAGAAGATAAAATTTAGCGCTTGACGCATATTAGCTAGTTAGGGTTAGTTTCTTAGCCATAATAATGCATGTTATAAGTAGTTAGGGATACCAACCCCTAGCTAAATACATGCATGTGTTCTTGTGTATCCACATAATTTATTTATGGTTAATTACGATGTTTTTTCTTTTTTTCTTGGGTTTTTTGGGAAAAAAATAATTGAAATTTAGCTTGGTTCATATTAGCTATAAAATTATATATAGTAAAGGTTATTTTCTAATGGAAAAT</genome_strand>
        <mrna_strand>TTAATTTCTCACTTTTTTTTCTTCTTTATTTTTA-TTTTTTCAATTTCCTATTTAGGCCACAACCACAATGGCTATTCCAAAAGGATTAGAAATCAATAATATTGTAGGATTATTCTTACTTTTGGGTATAGCCATTTTATCATCAAAAGTTGCAGAATGTGCACCTTTTGGTTCGCGTCGTGGCCTTATGGAGACAGTTTTCGATGTTACCAAGCACGGAGCTAGACCAGATCCCACTGCAGATAGCACTCGG...........................................................................................................GGATTTATGATGGCATGGAGAGCAGCATGTCAATCAACAGGCCCAGCAAAAATTGTTATTCCACCAGGAACATTTACTACAGGAGAAACTATTTTTCAAGGCCCATGTACATGTCCAAAGCCCATTATTATTGAAATTCAAGGGACAGTATTGTCAAATACAGACATAAGTTTGTACTCACGTGCCTCGTGGATATCCCTCGAACACGTGGACGGTGTCGTTATTACAGGTGGCGGAACTCTAAACGGACAAGGAAATGCCAGCTGGCAGTATGCTGACAAATCCGGAAGCGCTCCTCCTCTCCCTATC....................................................................................TCTCTTGTATTTCAAACTGTGAAGAGTTCTTCCATCAATGGCATAAATTTTGTGGATTCCAAAGGTGTCCATTTGAAAATTACTGATAGTAATGACATTACAGTTTCAAAAATCAAGATTACAGCACCAGCAACAAGTCCAAATACTGATGGAATTCATATAAGTGAAACAATTAATATCAATGTTACTGATAGCAACATTGGGACAGGTGATGATTGCATTAGTGTTGGACATGGTACTACCAATATTTTTGTCAATAATATTCATTGTGGCCCTGGACATGGAATAAG..........................................................................................................................................CATTGGAAGCCTTGGAAAGAGACCAGATGAGAAGGATGTTACAAAAGTTTATATAAAAAATTGTACATTCCACAGTACAACAAATGGTGCAAGAATCAAGACTTATATGGATTCATCTCCACTACAAGTTTCTGATGTTGTTTATGAAGATATTGTTTTGGAGGATGTTAAAAATCCAATTCTTATTGATCAACACTATAATTCCAAGAACAAGGTTGAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCATCAAAAGTGAAACTAAAAGATATTCACTTCAAGAACATAAGGGGGACAACAAATTCAAAAGCTCCAGTATCACTTAATTGCAGTGAAGCAGCTCCATGTGAAGGAGTTGAATTGGCTGATATCAATATAGCTCCATCTGGTACAACTGGACCTCTACAAGGAGCAACATGTCAAAATGCCAAGACAGTATTCAATGGAAAAACTAATGTTCCAGCATGTAAATAATTACATTACATTATTAATCAAATCATGTCCATATG-AAGTATGTGTATAAATTTCAATATAACCATGTAATTTTGTTTATGGTTTATTATAATATTTATTTA-A--TTTTTTTTCGATGCCTGGAAATAG---AAAAA-AA-AAGATAAAATTTAGCGCTTGACGCATATTAGCTACGGATG.................................................................................................................................................................................................TAGCTAGTTAGGGTTAGTTTCTTA-GCTAAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E243215" ref_strand="+" ref_description="SGN-E243215 [cLEE-2-E2]">
      <seq>ttattgtagatgaccaattttttcttcgaatacgaaattaaattacaatacacacaaaaaaaatatttgaattttttttatttaaactaaggaatgaaagaaaaaaacaaaataagaataagaaactcaaattattataataaaagaagtcaaaaaataatttttgtatgaaaaaattaaaatataccttgaactttgatagaagaatcatatatatccctaaatattttttttaaaaaaaaattagaagtaacaaatataaatttaaaactaattttttaactttcgttaaatgaagggtatatgtgagccattttctaacggcaggggtatatgtgagccgtttgtataacgataagggcatatatgaaccacttttattacgagggatatatcagctctaaatgacaaagttgagaggtatatcagacccttttccctattttttaaaatttcatac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="69149" stop="68094"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="68849" g_stop="68391" g_length="459"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="460" r_length="460" r_score="0.904"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E243215" ref_strand="+">
        <total_alignment_score>0.904</total_alignment_score>
        <cumulative_length_of_scored_exons>459</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E243215" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="68849" e_stop="68391"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTATTATAGATGACCAAATTTTTTCTTCGAATACGAAATTAAATTACAATACGCACAAAAAAATAGTTTAAATTTTTTTCCTTTAAACTAAGGAATGAAAGAAAAAAACATAATAAGAATAAGAAACCCAAATAATTATAATAAAAGAAGTCAAAAAATAATTTATGTATGAAAAAAATTAAAATATACCTTGAACTTTGATAGAAGAATCATATATATCTCTAAATA--ATTTTTAAAAAAAAATTAGAAGTAACAAATATAAATTTAAAACTAATTTTTTAACTTCCGTTAAATGAAGGGTATATGTGAGCCATGTTTGTGACGACAGGGGTATATGTGAGCCGTTTTTATAACGGTAAGGACATATATGAGTCACTTTTATAACGAAGGGTATATCAGCTCCAAATGACAAAATTGAGGGATATATCAGACCCTTTTCCCT-TTTTTTAATA-TTCAGGC</genome_strand>
        <mrna_strand>TTATTGTAGATGACC-AATTTTTTCTTCGAATACGAAATTAAATTACAATACACACAAAAAAAATATTTGAATTTTTTTTATTTAAACTAAGGAATGAAAGAAAAAAACAAAATAAGAATAAGAAACTCAAATTATTATAATAAAAGAAGTCAAAAAATAATTTTTGTATG-AAAAAATTAAAATATACCTTGAACTTTGATAGAAGAATCATATATATCCCTAAATATTTTTTTTAAAAAAAAATTAGAAGTAACAAATATAAATTTAAAACTAATTTTTTAACTTTCGTTAAATGAAGGGTATATGTGAGCCAT-TTTCTAACGGCAGGGGTATATGTGAGCCGTTTGTATAACGATAAGGGCATATATGAACCACTTTTATTACGAGGGATATATCAGCTCTAAATGACAAAGTTGAGAGGTATATCAGACCCTTTTCCCTATTTTTTAAAATTTCATAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E362913" ref_strand="+" ref_description="SGN-E362913 [cLPP-2-A11]">
      <seq>tttttttctttcttttatttttattttttcaatttcctatttaggccacaaccaccaatggctattccaaaagggattagaaatcaataatattgtaggattattcttacttttgggtatagccattttatcatcaaaagttgcagaatgtgcacctttggttcgcgtcgtggccttatggagacagttttcgatgttaccaagcacggagctagaccagatcccactgcagatagcactcggggatttatgatggcatggagagcagcatgtcaatcaacaggcccagcaaaaattgttattccaccaggaacatttactaccaggagaaactatttttcaaggcccatgtaccatgtccaaagcccattattattgaaattcaagggaccagtattgtcaaatacagacataagtttgtactcacgtgcctcgtggatatccctcgaacacgtggacggtgtcgttattacaggtggcggaactctaaacggacaaggaaatgccagctggcagtatgctgacaaatccggaagcgctcctcctctccctatctctcttgtatttcaaact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="70838" stop="69584"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="70538" g_stop="70298" g_length="241"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="243" r_length="243" r_score="0.954"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="70297" i_stop="70191" i_length="107">
            <donor d_prob="0.981" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="70190" g_stop="69882" g_length="309"/>
          <reference_exon_boundary r_type="cDNA" r_start="244" r_stop="555" r_length="312" r_score="0.955"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="69881" i_stop="69798" i_length="84">
            <donor d_prob="0.999" d_score="0.88"/>
            <acceptor a_prob="0.131" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="69797" g_stop="69780" g_length="18"/>
          <reference_exon_boundary r_type="cDNA" r_start="556" r_stop="573" r_length="18" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E362913" ref_strand="+">
        <total_alignment_score>0.955</total_alignment_score>
        <cumulative_length_of_scored_exons>568</cumulative_length_of_scored_exons>
        <coverage percentage="0.991" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E362913" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="70538" e_stop="70298"/>
          <exon e_start="70190" e_stop="69882"/>
          <exon e_start="69797" e_stop="69780"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTTTTC-TTCTTTATTTTTATTTTTTTCAATTTCCTATTTAGGCCACAACCA-CAATGGCTATTCCAAAA-GGATTAGAAATCAATAATATTGTAGGATTATTCTTACTTTTGGGTATAGCCATTTTATCATCAAAAGTTGCAGAATGTGCACCTTTTGGTTCGCGTCGTGGCCTTATGGAGACAGTTTTCGATGTTACCAAGCACGGAGCTAGACCAGATCCCACTGCAGATAGCACTCGGGTAAAACCCAAACTTATATTTAAATTTCTAGCTCTGCGCACTCTGCCGTAAAGCCAAAAATAAATTGGAGGCCTAACTTTTTTCTTTTTTGTTGTTGGTTTTAATAGGGATTTATGATGGCATGGAGAGCAGCATGTCAATCAACAGGCCCAGCAAAAGTTGTTATTCCACCAGGAACATTTACTA-CAGGAGAAACTATTTTTCAAGGCCCATGTA-CATGTCCAAAGCCCATTATTATTGAAATTCAAGGGA-CAGTATTGTCAAATACAGACATAAGTTTGTACTCACGTGCCTCATGGATATCCCTCGAACACGTGGACGGTGTCGTTATTACAGGTGGCGGAACTCTAAACGGACAAGGAAATGCCAGCTGGCAGTATGCTGACAAAAGCGGAAACTCTCCTCCTCTCCCTACGGTAAGTACAGATGATCACTCAATTTATAGTTGCTCGCTCTTCACTATTAAAAGTTATTAATTATTATTATATTTGTGTGTGTAGTCTCTTGTATTTCAAACT</genome_strand>
        <mrna_strand>TTTTTTTCTTTCTTTTATTTTTATTTTTTCAATTTCCTATTTAGGCCACAACCACCAATGGCTATTCCAAAAGGGATTAGAAATCAATAATATTGTAGGATTATTCTTACTTTTGGGTATAGCCATTTTATCATCAAAAGTTGCAGAATGTGCACC-TTTGGTTCGCGTCGTGGCCTTATGGAGACAGTTTTCGATGTTACCAAGCACGGAGCTAGACCAGATCCCACTGCAGATAGCACTCGG...........................................................................................................GGATTTATGATGGCATGGAGAGCAGCATGTCAATCAACAGGCCCAGCAAAAATTGTTATTCCACCAGGAACATTTACTACCAGGAGAAACTATTTTTCAAGGCCCATGTACCATGTCCAAAGCCCATTATTATTGAAATTCAAGGGACCAGTATTGTCAAATACAGACATAAGTTTGTACTCACGTGCCTCGTGGATATCCCTCGAACACGTGGACGGTGTCGTTATTACAGGTGGCGGAACTCTAAACGGACAAGGAAATGCCAGCTGGCAGTATGCTGACAAATCCGGAAGCGCTCCTCCTCTCCCTATC....................................................................................TCTCTTGTATTTCAAACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E331837" ref_strand="+" ref_description="SGN-E331837 [cTOD-7-D1]">
      <seq>ccttctttaatttctcactttttttcttctttatttttatttttttcaatttcctatttaggccacaaccacaatggctattccaaaaggattagaaatcaataatattgtaggattattcttacttttgggtatagccattttatcatcaaaagttgcagaatgtgcaccttttggttcgcgtcgtggccttatggagacagttttcgatgttaccaagcacggagctagaccagatcccactgcagatagcactcggggatttatgatggcatggagagcagcatgtcaatcaacaggcccagcaaaagttgttattccaccaggaacatttactacaggagaaactatttttcaaggcccatgtacatgtccaaagcccattattattgaaattcaagggacagtattgtcaaatacagacataagtttgtactcacgtgcctcatggatatccctcgaacacgtggacggtgtcgttattacaggtggcggaactc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="70856" stop="69650"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="70556" g_stop="70298" g_length="259"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="259" r_length="259" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="70297" i_stop="70191" i_length="107">
            <donor d_prob="0.981" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="70190" g_stop="69950" g_length="241"/>
          <reference_exon_boundary r_type="cDNA" r_start="260" r_stop="500" r_length="241" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E331837" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>500</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E331837" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="70556" e_stop="70298"/>
          <exon e_start="70190" e_stop="69950"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCTTCTTTAATTTCTCACTTTTTTTCTTCTTTATTTTTATTTTTTTCAATTTCCTATTTAGGCCACAACCACAATGGCTATTCCAAAAGGATTAGAAATCAATAATATTGTAGGATTATTCTTACTTTTGGGTATAGCCATTTTATCATCAAAAGTTGCAGAATGTGCACCTTTTGGTTCGCGTCGTGGCCTTATGGAGACAGTTTTCGATGTTACCAAGCACGGAGCTAGACCAGATCCCACTGCAGATAGCACTCGGGTAAAACCCAAACTTATATTTAAATTTCTAGCTCTGCGCACTCTGCCGTAAAGCCAAAAATAAATTGGAGGCCTAACTTTTTTCTTTTTTGTTGTTGGTTTTAATAGGGATTTATGATGGCATGGAGAGCAGCATGTCAATCAACAGGCCCAGCAAAAGTTGTTATTCCACCAGGAACATTTACTACAGGAGAAACTATTTTTCAAGGCCCATGTACATGTCCAAAGCCCATTATTATTGAAATTCAAGGGACAGTATTGTCAAATACAGACATAAGTTTGTACTCACGTGCCTCATGGATATCCCTCGAACACGTGGACGGTGTCGTTATTACAGGTGGCGGAACTC</genome_strand>
        <mrna_strand>CCTTCTTTAATTTCTCACTTTTTTTCTTCTTTATTTTTATTTTTTTCAATTTCCTATTTAGGCCACAACCACAATGGCTATTCCAAAAGGATTAGAAATCAATAATATTGTAGGATTATTCTTACTTTTGGGTATAGCCATTTTATCATCAAAAGTTGCAGAATGTGCACCTTTTGGTTCGCGTCGTGGCCTTATGGAGACAGTTTTCGATGTTACCAAGCACGGAGCTAGACCAGATCCCACTGCAGATAGCACTCGG...........................................................................................................GGATTTATGATGGCATGGAGAGCAGCATGTCAATCAACAGGCCCAGCAAAAGTTGTTATTCCACCAGGAACATTTACTACAGGAGAAACTATTTTTCAAGGCCCATGTACATGTCCAAAGCCCATTATTATTGAAATTCAAGGGACAGTATTGTCAAATACAGACATAAGTTTGTACTCACGTGCCTCATGGATATCCCTCGAACACGTGGACGGTGTCGTTATTACAGGTGGCGGAACTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E359939" ref_strand="+" ref_description="SGN-E359939 [cLPP-9-E1]">
      <seq>tttctcacttttttttcttctttatttttattttttcaatttcctatttaggccacaaccacaatggctattccaaaaggattagaaatcaataatattgtaggattattcttacttttgggtatagccattttatcatcaaaagttgcagaatgtgcaccttttggttcgcgtcgtggccttatggagacagttttcgatgttaccaagcacggagctagaccagatcccactgcagatagcactcggggatttatgatggcatggagagcagcatgtcaatcaacaggcccagcaaaaattgttattccaccaggaacatttactacaggagaaactatttttcaaggcccatgtacatgtccaaagcccattattattgaaattcaagggacagtattgtcaaatacagacataagtttgtactcacgtgcctcgtggatatccctcgaacacgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="70846" stop="69682"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="70546" g_stop="70298" g_length="249"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="249" r_length="249" r_score="0.988"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="70297" i_stop="70191" i_length="107">
            <donor d_prob="0.981" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="70190" g_stop="69982" g_length="209"/>
          <reference_exon_boundary r_type="cDNA" r_start="250" r_stop="458" r_length="209" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E359939" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>458</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E359939" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="70546" e_stop="70298"/>
          <exon e_start="70190" e_stop="69982"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCTCAC-TTTTTTTCTTCTTTATTTTTATTTTTTTCAATTTCCTATTTAGGCCACAACCACAATGGCTATTCCAAAAGGATTAGAAATCAATAATATTGTAGGATTATTCTTACTTTTGGGTATAGCCATTTTATCATCAAAAGTTGCAGAATGTGCACCTTTTGGTTCGCGTCGTGGCCTTATGGAGACAGTTTTCGATGTTACCAAGCACGGAGCTAGACCAGATCCCACTGCAGATAGCACTCGGGTAAAACCCAAACTTATATTTAAATTTCTAGCTCTGCGCACTCTGCCGTAAAGCCAAAAATAAATTGGAGGCCTAACTTTTTTCTTTTTTGTTGTTGGTTTTAATAGGGATTTATGATGGCATGGAGAGCAGCATGTCAATCAACAGGCCCAGCAAAAGTTGTTATTCCACCAGGAACATTTACTACAGGAGAAACTATTTTTCAAGGCCCATGTACATGTCCAAAGCCCATTATTATTGAAATTCAAGGGACAGTATTGTCAAATACAGACATAAGTTTGTACTCACGTGCCTCATGGATATCCCTCGAACACGT</genome_strand>
        <mrna_strand>TTTCTCACTTTTTTTTCTTCTTTATTTTTA-TTTTTTCAATTTCCTATTTAGGCCACAACCACAATGGCTATTCCAAAAGGATTAGAAATCAATAATATTGTAGGATTATTCTTACTTTTGGGTATAGCCATTTTATCATCAAAAGTTGCAGAATGTGCACCTTTTGGTTCGCGTCGTGGCCTTATGGAGACAGTTTTCGATGTTACCAAGCACGGAGCTAGACCAGATCCCACTGCAGATAGCACTCGG...........................................................................................................GGATTTATGATGGCATGGAGAGCAGCATGTCAATCAACAGGCCCAGCAAAAATTGTTATTCCACCAGGAACATTTACTACAGGAGAAACTATTTTTCAAGGCCCATGTACATGTCCAAAGCCCATTATTATTGAAATTCAAGGGACAGTATTGTCAAATACAGACATAAGTTTGTACTCACGTGCCTCGTGGATATCCCTCGAACACGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E362215" ref_strand="+" ref_description="SGN-E362215 [cLPP-11-J16]">
      <seq>ttaatttctcacttttttttcttctttatttttattttttcaatttcctatttaggccacaaccacaatggctattccaaaaggattagaaatcaataatattgtacgattattcttacttttgggtatagccattttatcatcaaaagttgcagaatgtgcaccttttggttcgcgtcgtggccttatggagacagttttcgatgttaccaagcacggagctagaccagatcccactgcagatagcactcggggatttatgatggcatggagagcagcatgtcaatcaacaggcccagcaaaaattgttattccaccaggaacatttactacaggagaaactatttttcaaggcccatgtacatgtccaaagcccattattattgaaattcaagggacagtattgtcaaatacagacataagtttgtactcacgtgcctcgtggat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="70850" stop="69697"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="70550" g_stop="70298" g_length="253"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="253" r_length="253" r_score="0.984"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="70297" i_stop="70191" i_length="107">
            <donor d_prob="0.981" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="70190" g_stop="69997" g_length="194"/>
          <reference_exon_boundary r_type="cDNA" r_start="254" r_stop="447" r_length="194" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E362215" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>447</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E362215" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="70550" e_stop="70298"/>
          <exon e_start="70190" e_stop="69997"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTAATTTCTCACTTTTT-TTCTTCTTTATTTTTATTTTTTTCAATTTCCTATTTAGGCCACAACCACAATGGCTATTCCAAAAGGATTAGAAATCAATAATATTGTAGGATTATTCTTACTTTTGGGTATAGCCATTTTATCATCAAAAGTTGCAGAATGTGCACCTTTTGGTTCGCGTCGTGGCCTTATGGAGACAGTTTTCGATGTTACCAAGCACGGAGCTAGACCAGATCCCACTGCAGATAGCACTCGGGTAAAACCCAAACTTATATTTAAATTTCTAGCTCTGCGCACTCTGCCGTAAAGCCAAAAATAAATTGGAGGCCTAACTTTTTTCTTTTTTGTTGTTGGTTTTAATAGGGATTTATGATGGCATGGAGAGCAGCATGTCAATCAACAGGCCCAGCAAAAGTTGTTATTCCACCAGGAACATTTACTACAGGAGAAACTATTTTTCAAGGCCCATGTACATGTCCAAAGCCCATTATTATTGAAATTCAAGGGACAGTATTGTCAAATACAGACATAAGTTTGTACTCACGTGCCTCATGGAT</genome_strand>
        <mrna_strand>TTAATTTCTCACTTTTTTTTCTTCTTTATTTTTA-TTTTTTCAATTTCCTATTTAGGCCACAACCACAATGGCTATTCCAAAAGGATTAGAAATCAATAATATTGTACGATTATTCTTACTTTTGGGTATAGCCATTTTATCATCAAAAGTTGCAGAATGTGCACCTTTTGGTTCGCGTCGTGGCCTTATGGAGACAGTTTTCGATGTTACCAAGCACGGAGCTAGACCAGATCCCACTGCAGATAGCACTCGG...........................................................................................................GGATTTATGATGGCATGGAGAGCAGCATGTCAATCAACAGGCCCAGCAAAAATTGTTATTCCACCAGGAACATTTACTACAGGAGAAACTATTTTTCAAGGCCCATGTACATGTCCAAAGCCCATTATTATTGAAATTCAAGGGACAGTATTGTCAAATACAGACATAAGTTTGTACTCACGTGCCTCGTGGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E359596" ref_strand="+" ref_description="SGN-E359596 [cLPP-5-K6]">
      <seq>tttaatttctcacttttttttcttctttatttttattttttcaatttcctatttaggccacaaccacaatggctattccaaaaggattagaaatcaataatattgtaggattattcttacttttgggtatagccattttatcatcaaaagttgcagaatgtgcaccttttggttcgcgtcgtggccttatggagacagttttcgatgttaccaagcacggagctagaccagatcccactgcagatagcactcggggatttatgatggcatggagagcagcatgtcaatcaacaggcccagcaaaaattgttattccaccaggaacatttactacaggagaaactatttttcaaggcccatgtacatgtccaaagcccattattattgaaattcaagggacagtattgtcaaatacagacataagtttgtactcacgtgcct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="70851" stop="69704"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="70551" g_stop="70298" g_length="254"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="254" r_length="254" r_score="0.988"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="70297" i_stop="70191" i_length="107">
            <donor d_prob="0.981" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="70190" g_stop="70004" g_length="187"/>
          <reference_exon_boundary r_type="cDNA" r_start="255" r_stop="441" r_length="187" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E359596" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>441</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E359596" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="70551" e_stop="70298"/>
          <exon e_start="70190" e_stop="70004"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTAATTTCTCACTTTT-TTTCTTCTTTATTTTTATTTTTTTCAATTTCCTATTTAGGCCACAACCACAATGGCTATTCCAAAAGGATTAGAAATCAATAATATTGTAGGATTATTCTTACTTTTGGGTATAGCCATTTTATCATCAAAAGTTGCAGAATGTGCACCTTTTGGTTCGCGTCGTGGCCTTATGGAGACAGTTTTCGATGTTACCAAGCACGGAGCTAGACCAGATCCCACTGCAGATAGCACTCGGGTAAAACCCAAACTTATATTTAAATTTCTAGCTCTGCGCACTCTGCCGTAAAGCCAAAAATAAATTGGAGGCCTAACTTTTTTCTTTTTTGTTGTTGGTTTTAATAGGGATTTATGATGGCATGGAGAGCAGCATGTCAATCAACAGGCCCAGCAAAAGTTGTTATTCCACCAGGAACATTTACTACAGGAGAAACTATTTTTCAAGGCCCATGTACATGTCCAAAGCCCATTATTATTGAAATTCAAGGGACAGTATTGTCAAATACAGACATAAGTTTGTACTCACGTGCCT</genome_strand>
        <mrna_strand>TTTAATTTCTCACTTTTTTTTCTTCTTTATTTTTA-TTTTTTCAATTTCCTATTTAGGCCACAACCACAATGGCTATTCCAAAAGGATTAGAAATCAATAATATTGTAGGATTATTCTTACTTTTGGGTATAGCCATTTTATCATCAAAAGTTGCAGAATGTGCACCTTTTGGTTCGCGTCGTGGCCTTATGGAGACAGTTTTCGATGTTACCAAGCACGGAGCTAGACCAGATCCCACTGCAGATAGCACTCGG...........................................................................................................GGATTTATGATGGCATGGAGAGCAGCATGTCAATCAACAGGCCCAGCAAAAATTGTTATTCCACCAGGAACATTTACTACAGGAGAAACTATTTTTCAAGGCCCATGTACATGTCCAAAGCCCATTATTATTGAAATTCAAGGGACAGTATTGTCAAATACAGACATAAGTTTGTACTCACGTGCCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E364303" ref_strand="+" ref_description="SGN-E364303 [cLPP-20-M18]">
      <seq>tttaatttctcacttttttttcttctttatttttattttttcaatttcctatttaggccacaaccacaatggctattccaaaaggattagaaatcaataatattgtaggattattcttacttttgggtatagccattttatcatcaaaagttgcagaatgtgcaccttttggttcgcgtcgtggccttatggagacagttttcgatgttaccaagcacggagctagaccagatcccactgcagatagcactcggggatttatgatggcatggagagcagcatgtcaatcaacaggcccagcaaaaattgttattccaccaggaacatttactacaggagagaactttttttcaaggcccatgtacatgtccaaagcccattattattgaaattcaagggacagtattgtcaaatacagacataagtttgtactcacgtgcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="70851" stop="69705"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="70551" g_stop="70298" g_length="254"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="254" r_length="254" r_score="0.988"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="70297" i_stop="70191" i_length="107">
            <donor d_prob="0.981" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="70190" g_stop="70005" g_length="186"/>
          <reference_exon_boundary r_type="cDNA" r_start="255" r_stop="441" r_length="187" r_score="0.978"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E364303" ref_strand="+">
        <total_alignment_score>0.984</total_alignment_score>
        <cumulative_length_of_scored_exons>440</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E364303" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="70551" e_stop="70298"/>
          <exon e_start="70190" e_stop="70005"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTAATTTCTCACTTTT-TTTCTTCTTTATTTTTATTTTTTTCAATTTCCTATTTAGGCCACAACCACAATGGCTATTCCAAAAGGATTAGAAATCAATAATATTGTAGGATTATTCTTACTTTTGGGTATAGCCATTTTATCATCAAAAGTTGCAGAATGTGCACCTTTTGGTTCGCGTCGTGGCCTTATGGAGACAGTTTTCGATGTTACCAAGCACGGAGCTAGACCAGATCCCACTGCAGATAGCACTCGGGTAAAACCCAAACTTATATTTAAATTTCTAGCTCTGCGCACTCTGCCGTAAAGCCAAAAATAAATTGGAGGCCTAACTTTTTTCTTTTTTGTTGTTGGTTTTAATAGGGATTTATGATGGCATGGAGAGCAGCATGTCAATCAACAGGCCCAGCAAAAGTTGTTATTCCACCAGGAACATTTACTACAGGAGA-AACTATTTTTCAAGGCCCATGTACATGTCCAAAGCCCATTATTATTGAAATTCAAGGGACAGTATTGTCAAATACAGACATAAGTTTGTACTCACGTGCC</genome_strand>
        <mrna_strand>TTTAATTTCTCACTTTTTTTTCTTCTTTATTTTTA-TTTTTTCAATTTCCTATTTAGGCCACAACCACAATGGCTATTCCAAAAGGATTAGAAATCAATAATATTGTAGGATTATTCTTACTTTTGGGTATAGCCATTTTATCATCAAAAGTTGCAGAATGTGCACCTTTTGGTTCGCGTCGTGGCCTTATGGAGACAGTTTTCGATGTTACCAAGCACGGAGCTAGACCAGATCCCACTGCAGATAGCACTCGG...........................................................................................................GGATTTATGATGGCATGGAGAGCAGCATGTCAATCAACAGGCCCAGCAAAAATTGTTATTCCACCAGGAACATTTACTACAGGAGAGAACTTTTTTTCAAGGCCCATGTACATGTCCAAAGCCCATTATTATTGAAATTCAAGGGACAGTATTGTCAAATACAGACATAAGTTTGTACTCACGTGCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E359727" ref_strand="+" ref_description="SGN-E359727 [cLPP-5-K16]">
      <seq>ttattcttacttttgggtatagccattttatcatcaaaagttgcagaatgtgcaccttttggttcgcgtcgtggccttatggagacagttttcgatgttaccaagcacggagctagaccagatcccactgcagatagcactcggggatttatgatggcatggagagcaacatgtcaatcaacaggcccaacaaaaattgttattccaccaggaacatttactacaggagaaactatttttcaaggcccatgtacatgtccaaagcccattattattgaaattca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="70741" stop="69751"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="70441" g_stop="70298" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="144" r_length="144" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="70297" i_stop="70191" i_length="107">
            <donor d_prob="0.981" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="70190" g_stop="70051" g_length="140"/>
          <reference_exon_boundary r_type="cDNA" r_start="145" r_stop="284" r_length="140" r_score="0.979"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E359727" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>284</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E359727" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="70441" e_stop="70298"/>
          <exon e_start="70190" e_stop="70051"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTATTCTTACTTTTGGGTATAGCCATTTTATCATCAAAAGTTGCAGAATGTGCACCTTTTGGTTCGCGTCGTGGCCTTATGGAGACAGTTTTCGATGTTACCAAGCACGGAGCTAGACCAGATCCCACTGCAGATAGCACTCGGGTAAAACCCAAACTTATATTTAAATTTCTAGCTCTGCGCACTCTGCCGTAAAGCCAAAAATAAATTGGAGGCCTAACTTTTTTCTTTTTTGTTGTTGGTTTTAATAGGGATTTATGATGGCATGGAGAGCAGCATGTCAATCAACAGGCCCAGCAAAAGTTGTTATTCCACCAGGAACATTTACTACAGGAGAAACTATTTTTCAAGGCCCATGTACATGTCCAAAGCCCATTATTATTGAAATTCA</genome_strand>
        <mrna_strand>TTATTCTTACTTTTGGGTATAGCCATTTTATCATCAAAAGTTGCAGAATGTGCACCTTTTGGTTCGCGTCGTGGCCTTATGGAGACAGTTTTCGATGTTACCAAGCACGGAGCTAGACCAGATCCCACTGCAGATAGCACTCGG...........................................................................................................GGATTTATGATGGCATGGAGAGCAACATGTCAATCAACAGGCCCAACAAAAATTGTTATTCCACCAGGAACATTTACTACAGGAGAAACTATTTTTCAAGGCCCATGTACATGTCCAAAGCCCATTATTATTGAAATTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E364131" ref_strand="+" ref_description="SGN-E364131 [cLPP-16-C12]">
      <seq>tttaatttctcacttttttttcttctttatttttattgtttcaatttcctatttaggccacaaccacaatggctattccaaaaggattagaaatcaataatattgtaggattattcttacttttgggtatagccattttatcatcaaaagttgcagaatgtgcaccttttggttcgcgtcgtggccttatggagacagttttcgatgttaccaagcacggagctagaccagatcccactgcagatagcactcggggatttatgatggcatggagagcagcatgtcaatcaacaggcccagcaaaaattgttattccaccaggaacatttactacatgagaaactatttttcaaggcccatgttcatgtccaaagcccatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="70851" stop="69765"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="70551" g_stop="70298" g_length="254"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="254" r_length="254" r_score="0.984"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="70297" i_stop="70191" i_length="107">
            <donor d_prob="0.981" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="70190" g_stop="70065" g_length="126"/>
          <reference_exon_boundary r_type="cDNA" r_start="255" r_stop="380" r_length="126" r_score="0.976"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E364131" ref_strand="+">
        <total_alignment_score>0.982</total_alignment_score>
        <cumulative_length_of_scored_exons>380</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E364131" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="70551" e_stop="70298"/>
          <exon e_start="70190" e_stop="70065"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTAATTTCTCACTTTT-TTTCTTCTTTATTTTTATTTTTTTCAATTTCCTATTTAGGCCACAACCACAATGGCTATTCCAAAAGGATTAGAAATCAATAATATTGTAGGATTATTCTTACTTTTGGGTATAGCCATTTTATCATCAAAAGTTGCAGAATGTGCACCTTTTGGTTCGCGTCGTGGCCTTATGGAGACAGTTTTCGATGTTACCAAGCACGGAGCTAGACCAGATCCCACTGCAGATAGCACTCGGGTAAAACCCAAACTTATATTTAAATTTCTAGCTCTGCGCACTCTGCCGTAAAGCCAAAAATAAATTGGAGGCCTAACTTTTTTCTTTTTTGTTGTTGGTTTTAATAGGGATTTATGATGGCATGGAGAGCAGCATGTCAATCAACAGGCCCAGCAAAAGTTGTTATTCCACCAGGAACATTTACTACAGGAGAAACTATTTTTCAAGGCCCATGTACATGTCCAAAGCCCATT</genome_strand>
        <mrna_strand>TTTAATTTCTCACTTTTTTTTCTTCTTTATTTTTA-TTGTTTCAATTTCCTATTTAGGCCACAACCACAATGGCTATTCCAAAAGGATTAGAAATCAATAATATTGTAGGATTATTCTTACTTTTGGGTATAGCCATTTTATCATCAAAAGTTGCAGAATGTGCACCTTTTGGTTCGCGTCGTGGCCTTATGGAGACAGTTTTCGATGTTACCAAGCACGGAGCTAGACCAGATCCCACTGCAGATAGCACTCGG...........................................................................................................GGATTTATGATGGCATGGAGAGCAGCATGTCAATCAACAGGCCCAGCAAAAATTGTTATTCCACCAGGAACATTTACTACATGAGAAACTATTTTTCAAGGCCCATGTTCATGTCCAAAGCCCATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E374306" ref_strand="+" ref_description="SGN-E374306 [TUS-33-J24]">
      <seq>taatttctcacttttttttcttctttatttttattttttcaatttcctatttaggccacaaccacaatggctattccaaaaggattagaaatcaataatattgtaggattattcttacttttgggtatagccattttatcatcaaaagttgcagaatgtgcaccttttggttcgcgtcgtggccttatggag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="-" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="70849" stop="70058"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="70549" g_stop="70358" g_length="192"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="192" r_length="192" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="-" ref_id="SGN-E374306" ref_strand="+">
        <total_alignment_score>0.984</total_alignment_score>
        <cumulative_length_of_scored_exons>192</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E374306" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="70549" e_stop="70358"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAATTTCTCACTTTTTT-TCTTCTTTATTTTTATTTTTTTCAATTTCCTATTTAGGCCACAACCACAATGGCTATTCCAAAAGGATTAGAAATCAATAATATTGTAGGATTATTCTTACTTTTGGGTATAGCCATTTTATCATCAAAAGTTGCAGAATGTGCACCTTTTGGTTCGCGTCGTGGCCTTATGGAG</genome_strand>
        <mrna_strand>TAATTTCTCACTTTTTTTTCTTCTTTATTTTTA-TTTTTTCAATTTCCTATTTAGGCCACAACCACAATGGCTATTCCAAAAGGATTAGAAATCAATAATATTGTAGGATTATTCTTACTTTTGGGTATAGCCATTTTATCATCAAAAGTTGCAGAATGTGCACCTTTTGGTTCGCGTCGTGGCCTTATGGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E450801" ref_strand="+" ref_description="SGN-E450801 [cSTS-10-B21]">
      <seq>ctttttcagtatagctggttgtaagttgataagaagaattagatcaatgtgctttgagaaggtggtccacatggaggtaggatggtttgatgaatctgagcactccactggaatcattggcgctagactttctgctgatgcagctgcagtccgtggtttagtaggagatgcacttgctcaaatggttcaagatactgcaacatcaattgtaggtttagctattgcttttgaagcgagttggcagttggcacttatcgttcttgttatgatacctctaattggattaaatggatatatccaaatcaagttcatgaaagggttcagtgcagatgcaaagatgatgtatgaggaagcaagtcaagttgcgaacgatgctgttggaggtataagaactgttgcgtcattttgtgcagaagagaaggtgatggaaatatacagaaaaaagtgtgaaggcccattgaaggcaggaataaagcaaggtttgattagtgggattgggtttggtgtatcatttgctttgctgttttgtgtatatgcaaccagtttttatgcgggagctcgtcttgttcaagatggcaaaatcactttttcagacgtcttccgggttttctttgctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="+" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="74469" stop="75859"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="74728" g_stop="75064" g_length="337"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="337" r_length="337" r_score="0.932"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="75065" i_stop="75286" i_length="222">
            <donor d_prob="0.997" d_score="0.88"/>
            <acceptor a_prob="0.997" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="75287" g_stop="75553" g_length="267"/>
          <reference_exon_boundary r_type="cDNA" r_start="338" r_stop="604" r_length="267" r_score="0.895"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="75554" i_stop="75645" i_length="92">
            <donor d_prob="0.973" d_score="0.84"/>
            <acceptor a_prob="0.887" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="75646" g_stop="75658" g_length="13"/>
          <reference_exon_boundary r_type="cDNA" r_start="605" r_stop="617" r_length="13" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="+" ref_id="SGN-E450801" ref_strand="+">
        <total_alignment_score>0.915</total_alignment_score>
        <cumulative_length_of_scored_exons>617</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E450801" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="74728" e_stop="75064"/>
          <exon e_start="75287" e_stop="75553"/>
          <exon e_start="75646" e_stop="75658"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATCATTGTGCTTTGAGAAGTTGGTCCACATGGAGGTAGGATGGTTTGATGAACCTGAGAACTCCACTGGTATCATTGGCGCTAGGCTTTCTGCTGATGCAGCAGCAGTCCGTGGCTTAGTAGGAGATGCACTTGCTCAAATGGTCCAAGATAGTGCAACAGCACTTATAGGTTTAGCTATTGCTTTTGAAGCAAGTTGGCAGTTGGCACTTATCGTTCTTGTTATGATACCTCTAATTGGATTAAGTGGATATCTCCAAATGAAATTTATGACAGGGTTCAGTGCAGATGCAAAGGTATGTTCGAGTCCTTATTGTTCAGCTTACATAATAGTGAATGAAGTTGCTATATTGGCCAAGCTACCTCACTATATCAGCTAACCTATGTATCTTGAACTTGATGGTTTTTCTCAAACATCAATAAGTTAGATAAGCTATAAATTATCTTTTTGGTTATTATCTCTTACCATTATAAACTCTTTCGGTGATAATGTTACTGATTAATCATACTTTTCACAGACAATGTATGCGGAAGCAAGTCAAGTTGCGAATGATGCTGTTGGAAGTATAAGAACTGTTGCATCATTTTGTGCAGAAGAGAAGGTGATGGAAACATACAGAGGGAAGTGTGAAGGCCCATTGAAGGCAGGAATCAAGCAAGGTTTGATTAGCGGAATGGGCTTTGGTGTATCAAATACTTTGATGTTTTGTGTATATGCAACCAGTTTTTATGCTGGAGCTCTTCTTGTTCAGAATGGCAAAATCACCTTTGCAGACGTTTACCGTGTATGCACAATACCCCCGGTTACATTTTTTTTCTCCAGGATTTTAGTTAATGTCTGTTATGAGGCTAATGCGGAGTACTTGCAACCTGGCAGGTTTTCTTTGCTC</genome_strand>
        <mrna_strand>CTTTTTCAGTATAGCTGGTTGTAAGTTGATAAGAAGAATTAGATCAATGTGCTTTGAGAAGGTGGTCCACATGGAGGTAGGATGGTTTGATGAATCTGAGCACTCCACTGGAATCATTGGCGCTAGACTTTCTGCTGATGCAGCTGCAGTCCGTGGTTTAGTAGGAGATGCACTTGCTCAAATGGTTCAAGATACTGCAACATCAATTGTAGGTTTAGCTATTGCTTTTGAAGCGAGTTGGCAGTTGGCACTTATCGTTCTTGTTATGATACCTCTAATTGGATTAAATGGATATATCCAAATCAAGTTCATGAAAGGGTTCAGTGCAGATGCAAAG..............................................................................................................................................................................................................................ATGATGTATGAGGAAGCAAGTCAAGTTGCGAACGATGCTGTTGGAGGTATAAGAACTGTTGCGTCATTTTGTGCAGAAGAGAAGGTGATGGAAATATACAGAAAAAAGTGTGAAGGCCCATTGAAGGCAGGAATAAAGCAAGGTTTGATTAGTGGGATTGGGTTTGGTGTATCATTTGCTTTGCTGTTTTGTGTATATGCAACCAGTTTTTATGCGGGAGCTCGTCTTGTTCAAGATGGCAAAATCACTTTTTCAGACGTCTTCCGG............................................................................................GTTTTCTTTGCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E550470" ref_strand="+" ref_description="SGN-E550470 [TUS-5-I17]">
      <seq>tcttgctcaagctggccaaatcactttctcagacgtcttccgtgttttcttttctctgacgacgcgcagctataggaatttcccagtcaagctcattggctccagattcaagcaaggccaagagtgcagctgcttccgtatttgctattctagacaggaaatcaaaaatagatccaagtgatgaatctggtatgacactggacacagtgaagggagatattgagctgaagcacgtaagctttaagtatccgacaaggccagatgttcaaattttaagagacctttgtttgaccattcgcagtggaaagacggttgctttggttggggagagcggatgtggaaagtctaccgtaatatcattgctgcaaaggttttatgatcctgattcaggccagatttcgttggacggaatagaaattcagaagttccaggtaaaatggctaaggcagcaaatggggcttgtaagccaagagcctgtgttgttcaacgacacaattcgagccaatattgcctatggaaaggaaggaaatgcaacagaagcagaagttttagcagcagccgaattagcaaacgcccacaagttcatcagtggtctgcaacagagttatgatacgacagtgggagaacgaggaactcaactgtcaggtgggcagaagcaacgagtagctatagcgagggccatattgaaaaatccaaaatcctactattagatgaggcgacnagcgcattggatgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="+" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="75367" stop="76796"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="75511" g_stop="75553" g_length="43"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="43" r_length="43" r_score="0.767"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="75554" i_stop="75645" i_length="92">
            <donor d_prob="0.973" d_score="0.77"/>
            <acceptor a_prob="0.887" a_score="0.88"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="75646" g_stop="75909" g_length="264"/>
          <reference_exon_boundary r_type="cDNA" r_start="44" r_stop="308" r_length="265" r_score="0.905"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="75910" i_stop="75989" i_length="80">
            <donor d_prob="0.954" d_score="0.92"/>
            <acceptor a_prob="0.986" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="75990" g_stop="76283" g_length="294"/>
          <reference_exon_boundary r_type="cDNA" r_start="309" r_stop="602" r_length="294" r_score="0.963"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="76284" i_stop="76362" i_length="79">
            <donor d_prob="0.999" d_score="0.94"/>
            <acceptor a_prob="0.993" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="76363" g_stop="76496" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="603" r_stop="735" r_length="133" r_score="0.925"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="+" ref_id="SGN-E550470" ref_strand="+">
        <total_alignment_score>0.934</total_alignment_score>
        <cumulative_length_of_scored_exons>735</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E550470" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="75511" e_stop="75553"/>
          <exon e_start="75646" e_stop="75909"/>
          <exon e_start="75990" e_stop="76283"/>
          <exon e_start="76363" e_stop="76496"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTTGTTCAGAATGGCAAAATCACCTTTGCAGACGTTTACCGTGTATGCACAATACCCCCGGTTACATTTTTTTTCTCCAGGATTTTAGTTAATGTCTGTTATGAGGCTAATGCGGAGTACTTGCAACCTGGCAGGTTTTCTTTGCTCTGTCAAC-AGCAGCTATAGGAATTTCCCAGTCAAGCTCATTGGCTCCAGATTCAACCAAGGCCAAGAATGCAGCTGCTTCGATATTTGCTATTCTAGACAGAAAATCAAAAGTAGATCCAAGTGATGAGTCTGGTAAGACACTGGAGAATGTGAAGGGAGATATCGAGCTGAGGCACGTAAGCTTTAAGTATCCAACGAGGCCAGATGTTCAAATTTTAAGAGACCTTTGCTTAACCATCCGCAGTGGACAGGTGAATTGACAGTTTGATTCCATCTTGGGTAAAGATTTTGTTAATTCATTAGCTAACTATGTTGTGAGTTGAAATTTCAGACGGTTGCTTTAGTTGGGGAGAGCGGATGTGGAAAGTCTACTGTAATATCTTTGCTGCAAAGGTTTTATGATCCTGATTCAGGCCAGATTTCGTTGGACGGAATAGAGATTCAGAAATTCCAGGTAAAATGGCTAAGGCAGCAAATGGGGCTTGTAAGCCAAGAGCCAGTGTTGTTCAACGACACAATTCGAGCCAATATTGCCTATGGAAAGGAAGGAAATGCAATTGAAGCAGAAGTTTTAGCAGCAGCAGAACTAGCAAATGCCCACAAGTTCATCAGTGGTCTGCAACAGGTTGGTTTGAATATCATATTCCTCCATATATATTGTGAACGGAAGTGATAGGCCAGCTTACATATTTCAAATATTATAGGGTTATGATACGACAGTGGGAGAGCGAGGAACTCAGCTGTCCGGTGGGCAAAAGCAACGAGTGGCTATAGCGAGGGCCATATTGAAAAATCCAAAAATCCTACTATTAGATGAGGCTACAAGTGCATTGGATGC</genome_strand>
        <mrna_strand>TCTTGCTCAAGCTGGCCAAATCACTTTCTCAGACGTCTTCCGT............................................................................................GTTTTCTTTTCTCTGACGACGCGCAGCTATAGGAATTTCCCAGTCAAGCTCATTGGCTCCAGATTCAAGCAAGGCCAAGAGTGCAGCTGCTTCCGTATTTGCTATTCTAGACAGGAAATCAAAAATAGATCCAAGTGATGAATCTGGTATGACACTGGACACAGTGAAGGGAGATATTGAGCTGAAGCACGTAAGCTTTAAGTATCCGACAAGGCCAGATGTTCAAATTTTAAGAGACCTTTGTTTGACCATTCGCAGTGGAAAG................................................................................ACGGTTGCTTTGGTTGGGGAGAGCGGATGTGGAAAGTCTACCGTAATATCATTGCTGCAAAGGTTTTATGATCCTGATTCAGGCCAGATTTCGTTGGACGGAATAGAAATTCAGAAGTTCCAGGTAAAATGGCTAAGGCAGCAAATGGGGCTTGTAAGCCAAGAGCCTGTGTTGTTCAACGACACAATTCGAGCCAATATTGCCTATGGAAAGGAAGGAAATGCAACAGAAGCAGAAGTTTTAGCAGCAGCCGAATTAGCAAACGCCCACAAGTTCATCAGTGGTCTGCAACAG...............................................................................AGTTATGATACGACAGTGGGAGAACGAGGAACTCAACTGTCAGGTGGGCAGAAGCAACGAGTAGCTATAGCGAGGGCCATATTGAAAAATCC-AAAATCCTACTATTAGATGAGGCGACNAGCGCATTGGATGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E228077" ref_strand="+" ref_description="SGN-E228077 [cLED-2-D23]">
      <seq>cttgttcaagctggccaaatcactttctcagacgtcttccgtgttttcttttctctgacgatggcagctataggaatttcccagtcaagctcattggctccagattcaagcaaggccaagagtgcagctgcttccgtatttgctattctagacaggaaatcaaaaatagatccaagtgatgaatctggtatgacactggacacagtgaagggagatattgagctgaagcacgtaagctttaagtatccgacaaggccagatgttcaaattttaagagacctttgtttgaccattcgcagtggaaagacggttgctttggttggggagagcggatgtggaaagtctaccgtaatatcattgctgcaaaggttttatgatcctgattcaggccagatttcgttggacggaatagaaattcagaagttccaggtaaaatggctaaggcagcaaatggggcttgtaagccaagagcctgtgttgttcaacgacacaattcgagccaatattgcctatggaaaggaaggaaatgcaacagaagcagaagttttagcagcagccgaattagcaaacgcccacaagttcatcagtggtctgcaacagagttatgatacgacagtgggagaacgaggaactc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="+" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="75343" stop="76696"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="75512" g_stop="75553" g_length="42"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="42" r_length="42" r_score="0.786"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="75554" i_stop="75645" i_length="92">
            <donor d_prob="0.973" d_score="0.79"/>
            <acceptor a_prob="0.887" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="75646" g_stop="75909" g_length="264"/>
          <reference_exon_boundary r_type="cDNA" r_start="43" r_stop="306" r_length="264" r_score="0.909"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="75910" i_stop="75989" i_length="80">
            <donor d_prob="0.954" d_score="0.92"/>
            <acceptor a_prob="0.986" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="75990" g_stop="76283" g_length="294"/>
          <reference_exon_boundary r_type="cDNA" r_start="307" r_stop="600" r_length="294" r_score="0.963"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="76284" i_stop="76362" i_length="79">
            <donor d_prob="0.999" d_score="0.94"/>
            <acceptor a_prob="0.993" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="76363" g_stop="76396" g_length="34"/>
          <reference_exon_boundary r_type="cDNA" r_start="601" r_stop="634" r_length="34" r_score="0.941"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="+" ref_id="SGN-E228077" ref_strand="+">
        <total_alignment_score>0.937</total_alignment_score>
        <cumulative_length_of_scored_exons>634</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E228077" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="75512" e_stop="75553"/>
          <exon e_start="75646" e_stop="75909"/>
          <exon e_start="75990" e_stop="76283"/>
          <exon e_start="76363" e_stop="76396"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTGTTCAGAATGGCAAAATCACCTTTGCAGACGTTTACCGTGTATGCACAATACCCCCGGTTACATTTTTTTTCTCCAGGATTTTAGTTAATGTCTGTTATGAGGCTAATGCGGAGTACTTGCAACCTGGCAGGTTTTCTTTGCTCTGTCAACAGCAGCTATAGGAATTTCCCAGTCAAGCTCATTGGCTCCAGATTCAACCAAGGCCAAGAATGCAGCTGCTTCGATATTTGCTATTCTAGACAGAAAATCAAAAGTAGATCCAAGTGATGAGTCTGGTAAGACACTGGAGAATGTGAAGGGAGATATCGAGCTGAGGCACGTAAGCTTTAAGTATCCAACGAGGCCAGATGTTCAAATTTTAAGAGACCTTTGCTTAACCATCCGCAGTGGACAGGTGAATTGACAGTTTGATTCCATCTTGGGTAAAGATTTTGTTAATTCATTAGCTAACTATGTTGTGAGTTGAAATTTCAGACGGTTGCTTTAGTTGGGGAGAGCGGATGTGGAAAGTCTACTGTAATATCTTTGCTGCAAAGGTTTTATGATCCTGATTCAGGCCAGATTTCGTTGGACGGAATAGAGATTCAGAAATTCCAGGTAAAATGGCTAAGGCAGCAAATGGGGCTTGTAAGCCAAGAGCCAGTGTTGTTCAACGACACAATTCGAGCCAATATTGCCTATGGAAAGGAAGGAAATGCAATTGAAGCAGAAGTTTTAGCAGCAGCAGAACTAGCAAATGCCCACAAGTTCATCAGTGGTCTGCAACAGGTTGGTTTGAATATCATATTCCTCCATATATATTGTGAACGGAAGTGATAGGCCAGCTTACATATTTCAAATATTATAGGGTTATGATACGACAGTGGGAGAGCGAGGAACTC</genome_strand>
        <mrna_strand>CTTGTTCAAGCTGGCCAAATCACTTTCTCAGACGTCTTCCGT............................................................................................GTTTTCTTTTCTCTGACGATGGCAGCTATAGGAATTTCCCAGTCAAGCTCATTGGCTCCAGATTCAAGCAAGGCCAAGAGTGCAGCTGCTTCCGTATTTGCTATTCTAGACAGGAAATCAAAAATAGATCCAAGTGATGAATCTGGTATGACACTGGACACAGTGAAGGGAGATATTGAGCTGAAGCACGTAAGCTTTAAGTATCCGACAAGGCCAGATGTTCAAATTTTAAGAGACCTTTGTTTGACCATTCGCAGTGGAAAG................................................................................ACGGTTGCTTTGGTTGGGGAGAGCGGATGTGGAAAGTCTACCGTAATATCATTGCTGCAAAGGTTTTATGATCCTGATTCAGGCCAGATTTCGTTGGACGGAATAGAAATTCAGAAGTTCCAGGTAAAATGGCTAAGGCAGCAAATGGGGCTTGTAAGCCAAGAGCCTGTGTTGTTCAACGACACAATTCGAGCCAATATTGCCTATGGAAAGGAAGGAAATGCAACAGAAGCAGAAGTTTTAGCAGCAGCCGAATTAGCAAACGCCCACAAGTTCATCAGTGGTCTGCAACAG...............................................................................AGTTATGATACGACAGTGGGAGAACGAGGAACTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E348216" ref_strand="+" ref_description="SGN-E348216 [cTOF-27-I13]">
      <seq>tgtctttttctatactctattttcgattcgcaaagatggattcgacagcaagtcggagaacggcatcagggagatcgtcggtggtagagtcaattaaaggttttactttcgccggagttaggatttccaaagaggatctacggaggagaattactatgccggaatatttaaggctggccataagggaggctatacagaataaggatgtcgatacagtaagacggcatctcgatacggcttatgccgccggcgccgagattcctcagccagcggaagagccgattatcgtctttattaattctaaaagtggtggaagacatggtccacagcttaaagctaggctacaggaactcatgggtgaagaacaggtttttgacctttcagatgtgaatcctcatgagtttgttcaatatggattgagttgcctggagaagtttgctgctcttggtgacagttgtgcaaaagtgactcgtgaaaggataagagtcgtggcagcaggaggtgatggcaccgttggatggattcttggctgccttggagatcttaagaaacagggccgagaaccagttccaccaacaggaataatcccacttggcacaggaaatgacttatccaggagttttggatgggggggctcatttccttttactgggagtcagccacaaaagtattcttgatagagttgcaacaggtccaattaaccgtct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="+" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="82375" stop="85775"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82675" g_stop="83042" g_length="368"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="368" r_length="368" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="83043" i_stop="84900" i_length="1858">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="84901" g_stop="85023" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="369" r_stop="491" r_length="123" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="85024" i_stop="85179" i_length="156">
            <donor d_prob="0.972" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="85180" g_stop="85317" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="492" r_stop="629" r_length="138" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="85318" i_stop="85395" i_length="78">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.975" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="85396" g_stop="85475" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="630" r_stop="707" r_length="78" r_score="0.962"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="+" ref_id="SGN-E348216" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>709</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E348216" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82675" e_stop="83042"/>
          <exon e_start="84901" e_stop="85023"/>
          <exon e_start="85180" e_stop="85317"/>
          <exon e_start="85396" e_stop="85475"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTCTTTTTCTATACTCTATTTTCGATTCGCAAAGATGGATTCGACAGCAAGTCGGAGAACGGCATCAGGGAGATCGTCGGTGGTAGAGTCAATTAAAGGTTTTACTTTCGCCGGAGTTAGGATTTCCAAAGAGGATCTACGGAGGAGAATTACTATGCCGGAATATTTAAGGCTGGCCATAAGGGAGGCTATACAGAATAAGGATGTCGATACAGTAAGACGGCATCTCGATACGGCTTATGCCGCCGGCGCCGAGATTCCTCAGCCAGCGGAAGAGCCGATTATCGTCTTTATTAATTCTAAAAGTGGTGGAAGACATGGTCCACAGCTTAAAGCTAGGCTACAGGAACTCATGGGTGAAGAACAGGTCATTTTTTTTTTCTCTGAAGAATTTACATACTAATTTATGCATACAGTAAAAGTAAAAAATCTCTAAACTAATAACTCCATATATTAATAATCTCTTTTAAAATGATAATTTCCTCTTGTTCCTACTTAAGGCAATAAAAAAAAATTACTTATTTCGATAAGATATTAAAATAATATATTTTTAAAAATATAAATATATGTTTTCATTAATATTATAATAAATTAATAATTTTTTAAAAGTATGAATATGTAGATAATATAATAAAATATGATCCTATAAAATTTAAATATAGTTAAATTTGTTTTTGAAGGTGCTGTATCATTTTAACTTCATCGTCAATATTGTTTTTGTAATGATAATCCACAATTCTTTTAAAATTCTGGACTTCTGAACATATATAATTTTCACCCATCTATTAAGTTATTATTGTAATAATTATGACTTCAAGTTTTCACATGTGTGTTCTTTTTAATTCTTTGAGATTTCATCCTAAATAATTTTTTCCTGCTAAAAATAATGTCTCTACAAAATAATAATATCTCGACAATCCCCTCTTATATTAATTTAGAGAGTTTTTACCATTCTTACTAAAGCTACATAAGTGATGCATTTTTCTTTTTTCTTTTTTTTTTAAATCTTTCATTTATTTTTCTCTCCATTTTTTGATTTTAAAAATTTTTGGGAATTGACTGTGGCACTATTTGATTGGGACATGGGGTGTACGTGTACTATGCTTTTTATAATAATTCTTATAAGTTGTGTGTAAGCTATGAATTTTTAGTGCCTGTTTAATTTTTTATTGCAGATATGATGTATGCTTGAATTATCGAGTCAGGCTTTAAGTTTTAATGAGTAAATTTGACATGGCTATGCTGTCAAGTACAAACTAAATTGAGCAATTAAGAAAGAAGACATTTTTTTGTTTGTAAAATTTGTTTTTTATAAAGTCAGCTACATCTACAACGTTGAAAATCAGGAGTTTTTAGTTACATTTGATTGTTTCACAACTTATAAGAATTAGTTTGTTAGTAGTTCGTGTTATGTTGCTTCGCAAATCATATATTTCAATCATTATATATTAAGTTCAGTATTAGCAACAGAAAGATATAACAAGTTGACATAAGCTGTTCAGCATATGGCTGAACAAAATTAGAAAAAGCAAACTACCAATATCCATCCAGACACATTCTATGCAGTTGTCTTGGAGAAGTGAGCAATCCACAACATAATGAAATGGCAAAGTGGCAAATTAAGATAAAAGGAACTGGGGATTGACTACAGGGGCGGAGCCAGTCCTCTTTTGTTCACCCGAACCCTGATGACGGAAAATATTATTATTTATATATGGTTAAAATTGTTTTTTATGTATACACAGTAGATATCAAACTCCGTTCAATTAGTTCGTGTGTTCAGTTCTTTAGATTTTGAACCCCCTTATTAAAAATTCTAGCTCCGCCATCGATTGATTGTCTTCTCTATCTGCCATTTGTCACTTACCAGTTAGATGGCACACAATGAAATCTTATGTATCACTGGAAGTTAGTGCAGTTGGGCATAGTTTAGATATTGATATTCTGAACAATATGATCTTTATTTCTGAATATAATTTGTCTAGGCTTTGATTGCTTATGGATTAAATTTTTAAGCCTTCTGGTTTTTTTATTGGCGCTTTTCTGTTCTGATATTGCTTAGCATGAGGGAAAATAATGGGTTGGTATAATTTGGTTGTGTATATATTATATAACAACATCCAGATTGATAACCATATGGTGTAAAATCTATGTTGTTTTTTAATACCGTGTCAAATGTCATTGATTTTCTCTCTTTTCTGTGTCTTTACTTCAAACTGTGCCAGGTTTTTGACCTTTCAGATGTGAATCCTCATGAGTTTGTTCAATATGGATTGAGTTGCCTGGAGAAGTTTGCTGCTCTTGGTGACAGTTGTGCAAAAGTGACTCGTGAAAGGATAAGAGTCGTGGTATGTATTTGATGTTACATGTAATTTGGACCCTTTTCAGTAGTTCAATAGTAGATTTTCAAATGCACTTCACTGGGATATTATAGAATTTATCGGAAAACTATTGCAAAAAGGAAATAGGAATTGAGGATTTATTTACTCCATCTGGTTTGGCAGGCAGCAGGAGGTGATGGCACCGTTGGATGGATTCTTGGCTGCCTTGGAGATCTTAAGAAACAGGGCCGAGAACCAGTTCCACCAACAGGAATAATCCCACTTGGCACAGGAAATGACTTATCCAGGAGTTTTGGATGGGTAAGCTTCTATGTGCATCAATTTTTCCATTCTTGTTCTATCTAGCCTTTATGAACTTCCCTAAAATCTACTTTTCAGGGGGGCTCATTTCCTTTTAACTGGAAGTCAGCCACAAAAAGTATTCTTGATAGAGTTGCAACAGGTCCAATTAACCGTCT</genome_strand>
        <mrna_strand>TGTCTTTTTCTATACTCTATTTTCGATTCGCAAAGATGGATTCGACAGCAAGTCGGAGAACGGCATCAGGGAGATCGTCGGTGGTAGAGTCAATTAAAGGTTTTACTTTCGCCGGAGTTAGGATTTCCAAAGAGGATCTACGGAGGAGAATTACTATGCCGGAATATTTAAGGCTGGCCATAAGGGAGGCTATACAGAATAAGGATGTCGATACAGTAAGACGGCATCTCGATACGGCTTATGCCGCCGGCGCCGAGATTCCTCAGCCAGCGGAAGAGCCGATTATCGTCTTTATTAATTCTAAAAGTGGTGGAAGACATGGTCCACAGCTTAAAGCTAGGCTACAGGAACTCATGGGTGAAGAACAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTTTGACCTTTCAGATGTGAATCCTCATGAGTTTGTTCAATATGGATTGAGTTGCCTGGAGAAGTTTGCTGCTCTTGGTGACAGTTGTGCAAAAGTGACTCGTGAAAGGATAAGAGTCGTG............................................................................................................................................................GCAGCAGGAGGTGATGGCACCGTTGGATGGATTCTTGGCTGCCTTGGAGATCTTAAGAAACAGGGCCGAGAACCAGTTCCACCAACAGGAATAATCCCACTTGGCACAGGAAATGACTTATCCAGGAGTTTTGGATGG..............................................................................GGGGGCTCATTTCCTTTT-ACTGGGAGTCAGCCAC-AAAAGTATTCTTGATAGAGTTGCAACAGGTCCAATTAACCGTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E363863" ref_strand="+" ref_description="SGN-E363863 [cLPT-10-H10]">
      <seq>tttactctattttcgattcgcaaagatggattcgacagcaagtcggagaacggcatcagggagatcgtcggtggtagagccaattaaaggttttactttcgccggagttaggatttccaaagaggatctacggaggagaattactatgccggaatatttaaggctggccataagggaggctatactgaataaggatgtcgatacagtaagacggcatctcgatacggcttatgccgccggcgccgagattcctcagccggcggaagcgccgattatcgtctttattaattctaaaagtggcggaagacatggtccacagcttaaagctaggctacaggaactcatgggtgaagaacaggtttttgacctttcagatgtgaagcctcatgagtttgttcaatatggattgagttgcctgga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="+" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="82385" stop="85262"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82685" g_stop="83042" g_length="358"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="358" r_length="358" r_score="0.983"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="83043" i_stop="84900" i_length="1858">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="84901" g_stop="84962" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="359" r_stop="420" r_length="62" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="+" ref_id="SGN-E363863" ref_strand="+">
        <total_alignment_score>0.983</total_alignment_score>
        <cumulative_length_of_scored_exons>420</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E363863" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82685" e_stop="83042"/>
          <exon e_start="84901" e_stop="84962"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATACTCTATTTTCGATTCGCAAAGATGGATTCGACAGCAAGTCGGAGAACGGCATCAGGGAGATCGTCGGTGGTAGAGTCAATTAAAGGTTTTACTTTCGCCGGAGTTAGGATTTCCAAAGAGGATCTACGGAGGAGAATTACTATGCCGGAATATTTAAGGCTGGCCATAAGGGAGGCTATACAGAATAAGGATGTCGATACAGTAAGACGGCATCTCGATACGGCTTATGCCGCCGGCGCCGAGATTCCTCAGCCAGCGGAAGAGCCGATTATCGTCTTTATTAATTCTAAAAGTGGTGGAAGACATGGTCCACAGCTTAAAGCTAGGCTACAGGAACTCATGGGTGAAGAACAGGTCATTTTTTTTTTCTCTGAAGAATTTACATACTAATTTATGCATACAGTAAAAGTAAAAAATCTCTAAACTAATAACTCCATATATTAATAATCTCTTTTAAAATGATAATTTCCTCTTGTTCCTACTTAAGGCAATAAAAAAAAATTACTTATTTCGATAAGATATTAAAATAATATATTTTTAAAAATATAAATATATGTTTTCATTAATATTATAATAAATTAATAATTTTTTAAAAGTATGAATATGTAGATAATATAATAAAATATGATCCTATAAAATTTAAATATAGTTAAATTTGTTTTTGAAGGTGCTGTATCATTTTAACTTCATCGTCAATATTGTTTTTGTAATGATAATCCACAATTCTTTTAAAATTCTGGACTTCTGAACATATATAATTTTCACCCATCTATTAAGTTATTATTGTAATAATTATGACTTCAAGTTTTCACATGTGTGTTCTTTTTAATTCTTTGAGATTTCATCCTAAATAATTTTTTCCTGCTAAAAATAATGTCTCTACAAAATAATAATATCTCGACAATCCCCTCTTATATTAATTTAGAGAGTTTTTACCATTCTTACTAAAGCTACATAAGTGATGCATTTTTCTTTTTTCTTTTTTTTTTAAATCTTTCATTTATTTTTCTCTCCATTTTTTGATTTTAAAAATTTTTGGGAATTGACTGTGGCACTATTTGATTGGGACATGGGGTGTACGTGTACTATGCTTTTTATAATAATTCTTATAAGTTGTGTGTAAGCTATGAATTTTTAGTGCCTGTTTAATTTTTTATTGCAGATATGATGTATGCTTGAATTATCGAGTCAGGCTTTAAGTTTTAATGAGTAAATTTGACATGGCTATGCTGTCAAGTACAAACTAAATTGAGCAATTAAGAAAGAAGACATTTTTTTGTTTGTAAAATTTGTTTTTTATAAAGTCAGCTACATCTACAACGTTGAAAATCAGGAGTTTTTAGTTACATTTGATTGTTTCACAACTTATAAGAATTAGTTTGTTAGTAGTTCGTGTTATGTTGCTTCGCAAATCATATATTTCAATCATTATATATTAAGTTCAGTATTAGCAACAGAAAGATATAACAAGTTGACATAAGCTGTTCAGCATATGGCTGAACAAAATTAGAAAAAGCAAACTACCAATATCCATCCAGACACATTCTATGCAGTTGTCTTGGAGAAGTGAGCAATCCACAACATAATGAAATGGCAAAGTGGCAAATTAAGATAAAAGGAACTGGGGATTGACTACAGGGGCGGAGCCAGTCCTCTTTTGTTCACCCGAACCCTGATGACGGAAAATATTATTATTTATATATGGTTAAAATTGTTTTTTATGTATACACAGTAGATATCAAACTCCGTTCAATTAGTTCGTGTGTTCAGTTCTTTAGATTTTGAACCCCCTTATTAAAAATTCTAGCTCCGCCATCGATTGATTGTCTTCTCTATCTGCCATTTGTCACTTACCAGTTAGATGGCACACAATGAAATCTTATGTATCACTGGAAGTTAGTGCAGTTGGGCATAGTTTAGATATTGATATTCTGAACAATATGATCTTTATTTCTGAATATAATTTGTCTAGGCTTTGATTGCTTATGGATTAAATTTTTAAGCCTTCTGGTTTTTTTATTGGCGCTTTTCTGTTCTGATATTGCTTAGCATGAGGGAAAATAATGGGTTGGTATAATTTGGTTGTGTATATATTATATAACAACATCCAGATTGATAACCATATGGTGTAAAATCTATGTTGTTTTTTAATACCGTGTCAAATGTCATTGATTTTCTCTCTTTTCTGTGTCTTTACTTCAAACTGTGCCAGGTTTTTGACCTTTCAGATGTGAATCCTCATGAGTTTGTTCAATATGGATTGAGTTGCCTGGA</genome_strand>
        <mrna_strand>TTTACTCTATTTTCGATTCGCAAAGATGGATTCGACAGCAAGTCGGAGAACGGCATCAGGGAGATCGTCGGTGGTAGAGCCAATTAAAGGTTTTACTTTCGCCGGAGTTAGGATTTCCAAAGAGGATCTACGGAGGAGAATTACTATGCCGGAATATTTAAGGCTGGCCATAAGGGAGGCTATACTGAATAAGGATGTCGATACAGTAAGACGGCATCTCGATACGGCTTATGCCGCCGGCGCCGAGATTCCTCAGCCGGCGGAAGCGCCGATTATCGTCTTTATTAATTCTAAAAGTGGCGGAAGACATGGTCCACAGCTTAAAGCTAGGCTACAGGAACTCATGGGTGAAGAACAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTTTGACCTTTCAGATGTGAAGCCTCATGAGTTTGTTCAATATGGATTGAGTTGCCTGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E617168" ref_strand="+" ref_description="SGN-E617168 [90643]">
      <seq>gtggtggaagacatggtccacaacttaaagctaggctacaggaactcatgggtgaagaacaggtttttgacctttcagaatgtgaagcctcatgagtttgttcaatatggattgagttgcctggagaagtttgctgctcttggtgacagctgtgcaaaagtaactcgtgaaaggataagagtcgtggcagctggaggtgatggcaccgttggatgggttcttggctgccttggagatcttaagaaacagggacgagagccagttccaccaacaggaataatcccacttggcacaggaaatgacttatccaggagtnttggatgggggggctcatttccttttaactgggaagtcagccacaaaaagtattcttgatagagttgcaacaggtccaattaaccgtctggatagttggaatcttctaatatcaatgccggctggggaaaaactggaaacacctcattctctgaaacctactgaggatgcatctcttgatcaggaattgaaaattgatggtgagttgcccaagaagttgtccaactatcaaggagtatactacaattactttagcataggaatggatgcacaggtagcatatggcttccatcatttacgggaatgaaaaaaccataccttgcacaaggtcccatatcaaacaaggttgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="+" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="82681" stop="87942"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82981" g_stop="83042" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="62" r_length="62" r_score="0.984"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="83043" i_stop="84900" i_length="1858">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.986" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="84901" g_stop="85023" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="63" r_stop="186" r_length="124" r_score="0.959"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="85024" i_stop="85179" i_length="156">
            <donor d_prob="0.972" d_score="0.96"/>
            <acceptor a_prob="0.997" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="85180" g_stop="85317" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="187" r_stop="324" r_length="138" r_score="0.964"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="85318" i_stop="85395" i_length="78">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.975" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="85396" g_stop="85481" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="325" r_stop="411" r_length="87" r_score="0.977"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="85482" i_stop="85972" i_length="491">
            <donor d_prob="0.930" d_score="1.00"/>
            <acceptor a_prob="0.971" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="85973" g_stop="86060" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="412" r_stop="499" r_length="88" r_score="0.966"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="86061" i_stop="86442" i_length="382">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="86443" g_stop="86518" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="500" r_stop="575" r_length="76" r_score="0.934"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="86519" i_stop="87553" i_length="1035">
            <donor d_prob="0.068" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="87554" g_stop="87642" g_length="89"/>
          <reference_exon_boundary r_type="cDNA" r_start="576" r_stop="666" r_length="91" r_score="0.944"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="+" ref_id="SGN-E617168" ref_strand="+">
        <total_alignment_score>0.961</total_alignment_score>
        <cumulative_length_of_scored_exons>662</cumulative_length_of_scored_exons>
        <coverage percentage="0.994" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E617168" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82981" e_stop="83042"/>
          <exon e_start="84901" e_stop="85023"/>
          <exon e_start="85180" e_stop="85317"/>
          <exon e_start="85396" e_stop="85481"/>
          <exon e_start="85973" e_stop="86060"/>
          <exon e_start="86443" e_stop="86518"/>
          <exon e_start="87554" e_stop="87642"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGGTGGAAGACATGGTCCACAGCTTAAAGCTAGGCTACAGGAACTCATGGGTGAAGAACAGGTCATTTTTTTTTTCTCTGAAGAATTTACATACTAATTTATGCATACAGTAAAAGTAAAAAATCTCTAAACTAATAACTCCATATATTAATAATCTCTTTTAAAATGATAATTTCCTCTTGTTCCTACTTAAGGCAATAAAAAAAAATTACTTATTTCGATAAGATATTAAAATAATATATTTTTAAAAATATAAATATATGTTTTCATTAATATTATAATAAATTAATAATTTTTTAAAAGTATGAATATGTAGATAATATAATAAAATATGATCCTATAAAATTTAAATATAGTTAAATTTGTTTTTGAAGGTGCTGTATCATTTTAACTTCATCGTCAATATTGTTTTTGTAATGATAATCCACAATTCTTTTAAAATTCTGGACTTCTGAACATATATAATTTTCACCCATCTATTAAGTTATTATTGTAATAATTATGACTTCAAGTTTTCACATGTGTGTTCTTTTTAATTCTTTGAGATTTCATCCTAAATAATTTTTTCCTGCTAAAAATAATGTCTCTACAAAATAATAATATCTCGACAATCCCCTCTTATATTAATTTAGAGAGTTTTTACCATTCTTACTAAAGCTACATAAGTGATGCATTTTTCTTTTTTCTTTTTTTTTTAAATCTTTCATTTATTTTTCTCTCCATTTTTTGATTTTAAAAATTTTTGGGAATTGACTGTGGCACTATTTGATTGGGACATGGGGTGTACGTGTACTATGCTTTTTATAATAATTCTTATAAGTTGTGTGTAAGCTATGAATTTTTAGTGCCTGTTTAATTTTTTATTGCAGATATGATGTATGCTTGAATTATCGAGTCAGGCTTTAAGTTTTAATGAGTAAATTTGACATGGCTATGCTGTCAAGTACAAACTAAATTGAGCAATTAAGAAAGAAGACATTTTTTTGTTTGTAAAATTTGTTTTTTATAAAGTCAGCTACATCTACAACGTTGAAAATCAGGAGTTTTTAGTTACATTTGATTGTTTCACAACTTATAAGAATTAGTTTGTTAGTAGTTCGTGTTATGTTGCTTCGCAAATCATATATTTCAATCATTATATATTAAGTTCAGTATTAGCAACAGAAAGATATAACAAGTTGACATAAGCTGTTCAGCATATGGCTGAACAAAATTAGAAAAAGCAAACTACCAATATCCATCCAGACACATTCTATGCAGTTGTCTTGGAGAAGTGAGCAATCCACAACATAATGAAATGGCAAAGTGGCAAATTAAGATAAAAGGAACTGGGGATTGACTACAGGGGCGGAGCCAGTCCTCTTTTGTTCACCCGAACCCTGATGACGGAAAATATTATTATTTATATATGGTTAAAATTGTTTTTTATGTATACACAGTAGATATCAAACTCCGTTCAATTAGTTCGTGTGTTCAGTTCTTTAGATTTTGAACCCCCTTATTAAAAATTCTAGCTCCGCCATCGATTGATTGTCTTCTCTATCTGCCATTTGTCACTTACCAGTTAGATGGCACACAATGAAATCTTATGTATCACTGGAAGTTAGTGCAGTTGGGCATAGTTTAGATATTGATATTCTGAACAATATGATCTTTATTTCTGAATATAATTTGTCTAGGCTTTGATTGCTTATGGATTAAATTTTTAAGCCTTCTGGTTTTTTTATTGGCGCTTTTCTGTTCTGATATTGCTTAGCATGAGGGAAAATAATGGGTTGGTATAATTTGGTTGTGTATATATTATATAACAACATCCAGATTGATAACCATATGGTGTAAAATCTATGTTGTTTTTTAATACCGTGTCAAATGTCATTGATTTTCTCTCTTTTCTGTGTCTTTACTTCAAACTGTGCCAGGTTTTTGACCTTTCAG-ATGTGAATCCTCATGAGTTTGTTCAATATGGATTGAGTTGCCTGGAGAAGTTTGCTGCTCTTGGTGACAGTTGTGCAAAAGTGACTCGTGAAAGGATAAGAGTCGTGGTATGTATTTGATGTTACATGTAATTTGGACCCTTTTCAGTAGTTCAATAGTAGATTTTCAAATGCACTTCACTGGGATATTATAGAATTTATCGGAAAACTATTGCAAAAAGGAAATAGGAATTGAGGATTTATTTACTCCATCTGGTTTGGCAGGCAGCAGGAGGTGATGGCACCGTTGGATGGATTCTTGGCTGCCTTGGAGATCTTAAGAAACAGGGCCGAGAACCAGTTCCACCAACAGGAATAATCCCACTTGGCACAGGAAATGACTTATCCAGGAGTTTTGGATGGGTAAGCTTCTATGTGCATCAATTTTTCCATTCTTGTTCTATCTAGCCTTTATGAACTTCCCTAAAATCTACTTTTCAGGGGGGCTCATTTCCTTTTAACT-GGAAGTCAGCCACAAAAAGTATTCTTGATAGAGTTGCAACAGGTCCAATTAACCGTCTGGATAGGTGATGCCTTTATGCATGGTTCTTGATAAACATATTTTCAAGTTTCATGATGATGATATTGCTTAACTTACAAGATGTTCAATTGAATTGCTGAGCGATGTTTTGGATTGAAGTATGATTTTCTTTTTGAATCTCTACTAAAAAAGATTGTTAATCTAAAACTAGCGACCAAATTTATTGAAGCCCTACTATTTGCCTTATATTTGCTCCTTGGTGCACAAGAATGGATTCCTTTTCTTTGTGTTATTACTTGACTGTTTATTTTTTTTAACTTTTCGGCGTGGAGGTAAAATTTCTACATCAAAATGACAGTAGGATGTCCAATATGCTCCTGATGAACATTTGCTTTTAGCAAACATAATGATAGGCAGAAAATATTACCTTTAGGAAGAATATATTTCATTTCTCTTTCTTCTTCAATTTCTATCTCAATAATTTGTGGCTTGTTTATACTCCGAGCTACTTCATGAAACTATAGCTTTCATTTGCAGTTGGAATCTTCTAATATCAATGCCAGCTGGGGATAAACTGGAAACACCTCATTCTCTGAAATCTACTGAGGATGCATCTCTTGATCAGGTCATTCTACATTTATTTTTACAAATTTGTTAACTGATATATGGACATGTCTAATTACTTTTGCTTTCTAATTACCTTGGCGTTAGACCTCAACTGGAATACATAGTGTTATACTATTTTGTGGGTGATTACTTATCTTTCCTCCATTGAGCTCATCGAGGGTTTTATTTGTTTGCTGATACTCCAACGGTTTTCTTTATTATTATTTCATCTTTATCTTCAATAAAATGCGCTTGCCAAATGGTCATTTAGCCAAGGAACTGCTGTAATGAATTTCTTTTTAAATTACGCTTTTACTTTTTCCATAATATGATTTATGATAAGCATATGTAATGTTTGTTTTCTGTTTTACTGATTTTTTTTCTGTGATTTTGTTGTGCAGGAACTGGAAATTGATAGCGAGTTGCCCAAGAAATTGTCCAACTATCAAGGAGTATACTACAATTACTTTAGCATAGGTATGACGATTAATAGATCATAGAAGTAATTAAACGTCAAGACTCATTTCACATTAGGGTTCACTTAGATTGTAAGAGAGCGTAAGATCTAATAAATTGTGTACTTCTATCTTGGAAAATCTTTGTATATAGTTTACATCACTAGCATTAATGTGAACTTTCGAAATCTTAATTCATAAACTTAGTCCATAATGTTTCATAGCAACCTGCTTACTCATCTCTACTTTCCATAATCCCTTTTGATTGTACTCTCCTTCCTCTCAGTAATTCAATGTCTAGACCCTCTTATGAGATCTTTTTCGAACTTTTTCTATTGCACTTACTTACATGCAGGTGAGAAATTATTTTATGTATAGATGCTGGTTTTGTTTGCTAAAGAGTAAAAGCTTGCCAGAATAAATACTATGTTAGCACCTCTCTTATATTTGCAATTTGCTTAGATTCGTAAAGGTTGAGGCTTCTCTTATGGTCAAACTAACTATAAGAGATCTCTTTTTATTTTTTTTAATCCAAGTACAACTTGTCTGAACTCTCTTCTTCTAATCAGCAAAACTGTCTTTTGTTTTTGCTTTTTTAACAAGGTAAGATTCTAACCCCTACCTTATCAAAAAAAGGATTACAGTGACATTCTATTGATGATAAACTAGCCTAATCTTTGCTGGAGAAGATTACACAGATAAATCGGATCAACAATTTGATGTAGAGTAGCATTTACATCATGTACAATTACCAGTCTGCACCGAAAAGATATACCTATGTTTAAGGCTAATAACATTTTGCCTTCGAATTCTGTATTCTTTTTGTCCACGCGGTCCACCAAATTGCGGGTGGAATTGAGTTCCATCTTCTTTTGCCTTCATTACTGATCCCTCTAAAATTTTTTCATATAAGTTTGTTAGTGAAGGATAAAAACATCTCTTTGTGAATCAGAATAGTTCATTCGGTTGTTACAATCATTTTCCCTCCCTCCCCCCATTTGGTCCACAAGATTTAAAGTTTGTGTTCGATAACTTGTATCTATAACTTTATATGCAGGAATGGATGCACAGGTAGCTTATGGCTTCCATCATTTAC-GGAATG-AAAAACCATACCTTGCACAAGGTCCCATATCAAACAAGGTTGAT</genome_strand>
        <mrna_strand>GTGGTGGAAGACATGGTCCACAACTTAAAGCTAGGCTACAGGAACTCATGGGTGAAGAACAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTTTGACCTTTCAGAATGTGAAGCCTCATGAGTTTGTTCAATATGGATTGAGTTGCCTGGAGAAGTTTGCTGCTCTTGGTGACAGCTGTGCAAAAGTAACTCGTGAAAGGATAAGAGTCGTG............................................................................................................................................................GCAGCTGGAGGTGATGGCACCGTTGGATGGGTTCTTGGCTGCCTTGGAGATCTTAAGAAACAGGGACGAGAGCCAGTTCCACCAACAGGAATAATCCCACTTGGCACAGGAAATGACTTATCCAGGAGTNTTGGATGG..............................................................................GGGGGCTCATTTCCTTTTAACTGGGAAGTCAGCCACAAAAAGTATTCTTGATAGAGTTGCAACAGGTCCAATTAACCGTCTGGATAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGAATCTTCTAATATCAATGCCGGCTGGGGAAAAACTGGAAACACCTCATTCTCTGAAACCTACTGAGGATGCATCTCTTGATCAG..............................................................................................................................................................................................................................................................................................................................................................................................GAATTGAAAATTGATGGTGAGTTGCCCAAGAAGTTGTCCAACTATCAAGGAGTATACTACAATTACTTTAGCATAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATGGATGCACAGGTAGCATATGGCTTCCATCATTTACGGGAATGAAAAAACCATACCTTGCACAAGGTCCCATATCAAACAAGGTTGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E421475" ref_strand="+" ref_description="SGN-E421475 [STM-32-P6]">
      <seq>aagacatggtccacaacttaaagctaggctacaggaactcatgggtgaagaacaggtttttgacctttcagatgtgatgcctcatgagtttgttcaatatggattgagttgcctggagaagtttgctgctcttggtgacagctgtgcaaaagtaactcgtgaaaggataagagtcgtggcagcaggaggtgatggcaccgttggatggattcttggctgccttggagagcttaagaaacagggtcgagagccagttccaccaacaggaataatcccacttggcacaggaaatgacttatccaggagttttggatgggggggctcatttccttttaactggaagtcagccacaaaaagtattcttgatagagttgcaacaggttcaattaaccgtctggatagttggaatcttctaatatcaatgccggctggggaaaagctggaaacacctcattctctgaaacctactgaggatgcatctcttgatcaggaaattggaattgatggtgagttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="+" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="82688" stop="86381"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82988" g_stop="83042" g_length="55"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="55" r_length="55" r_score="0.982"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="83043" i_stop="84900" i_length="1858">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.986" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="84901" g_stop="85023" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="56" r_stop="178" r_length="123" r_score="0.967"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="85024" i_stop="85179" i_length="156">
            <donor d_prob="0.972" d_score="0.96"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="85180" g_stop="85317" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="179" r_stop="316" r_length="138" r_score="0.978"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="85318" i_stop="85395" i_length="78">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="85396" g_stop="85481" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="317" r_stop="402" r_length="86" r_score="0.988"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="85482" i_stop="85972" i_length="491">
            <donor d_prob="0.930" d_score="0.98"/>
            <acceptor a_prob="0.971" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="85973" g_stop="86060" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="403" r_stop="490" r_length="88" r_score="0.955"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="+" ref_id="SGN-E421475" ref_strand="+">
        <total_alignment_score>0.973</total_alignment_score>
        <cumulative_length_of_scored_exons>490</cumulative_length_of_scored_exons>
        <coverage percentage="0.953" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E421475" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82988" e_stop="83042"/>
          <exon e_start="84901" e_stop="85023"/>
          <exon e_start="85180" e_stop="85317"/>
          <exon e_start="85396" e_stop="85481"/>
          <exon e_start="85973" e_stop="86060"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGACATGGTCCACAGCTTAAAGCTAGGCTACAGGAACTCATGGGTGAAGAACAGGTCATTTTTTTTTTCTCTGAAGAATTTACATACTAATTTATGCATACAGTAAAAGTAAAAAATCTCTAAACTAATAACTCCATATATTAATAATCTCTTTTAAAATGATAATTTCCTCTTGTTCCTACTTAAGGCAATAAAAAAAAATTACTTATTTCGATAAGATATTAAAATAATATATTTTTAAAAATATAAATATATGTTTTCATTAATATTATAATAAATTAATAATTTTTTAAAAGTATGAATATGTAGATAATATAATAAAATATGATCCTATAAAATTTAAATATAGTTAAATTTGTTTTTGAAGGTGCTGTATCATTTTAACTTCATCGTCAATATTGTTTTTGTAATGATAATCCACAATTCTTTTAAAATTCTGGACTTCTGAACATATATAATTTTCACCCATCTATTAAGTTATTATTGTAATAATTATGACTTCAAGTTTTCACATGTGTGTTCTTTTTAATTCTTTGAGATTTCATCCTAAATAATTTTTTCCTGCTAAAAATAATGTCTCTACAAAATAATAATATCTCGACAATCCCCTCTTATATTAATTTAGAGAGTTTTTACCATTCTTACTAAAGCTACATAAGTGATGCATTTTTCTTTTTTCTTTTTTTTTTAAATCTTTCATTTATTTTTCTCTCCATTTTTTGATTTTAAAAATTTTTGGGAATTGACTGTGGCACTATTTGATTGGGACATGGGGTGTACGTGTACTATGCTTTTTATAATAATTCTTATAAGTTGTGTGTAAGCTATGAATTTTTAGTGCCTGTTTAATTTTTTATTGCAGATATGATGTATGCTTGAATTATCGAGTCAGGCTTTAAGTTTTAATGAGTAAATTTGACATGGCTATGCTGTCAAGTACAAACTAAATTGAGCAATTAAGAAAGAAGACATTTTTTTGTTTGTAAAATTTGTTTTTTATAAAGTCAGCTACATCTACAACGTTGAAAATCAGGAGTTTTTAGTTACATTTGATTGTTTCACAACTTATAAGAATTAGTTTGTTAGTAGTTCGTGTTATGTTGCTTCGCAAATCATATATTTCAATCATTATATATTAAGTTCAGTATTAGCAACAGAAAGATATAACAAGTTGACATAAGCTGTTCAGCATATGGCTGAACAAAATTAGAAAAAGCAAACTACCAATATCCATCCAGACACATTCTATGCAGTTGTCTTGGAGAAGTGAGCAATCCACAACATAATGAAATGGCAAAGTGGCAAATTAAGATAAAAGGAACTGGGGATTGACTACAGGGGCGGAGCCAGTCCTCTTTTGTTCACCCGAACCCTGATGACGGAAAATATTATTATTTATATATGGTTAAAATTGTTTTTTATGTATACACAGTAGATATCAAACTCCGTTCAATTAGTTCGTGTGTTCAGTTCTTTAGATTTTGAACCCCCTTATTAAAAATTCTAGCTCCGCCATCGATTGATTGTCTTCTCTATCTGCCATTTGTCACTTACCAGTTAGATGGCACACAATGAAATCTTATGTATCACTGGAAGTTAGTGCAGTTGGGCATAGTTTAGATATTGATATTCTGAACAATATGATCTTTATTTCTGAATATAATTTGTCTAGGCTTTGATTGCTTATGGATTAAATTTTTAAGCCTTCTGGTTTTTTTATTGGCGCTTTTCTGTTCTGATATTGCTTAGCATGAGGGAAAATAATGGGTTGGTATAATTTGGTTGTGTATATATTATATAACAACATCCAGATTGATAACCATATGGTGTAAAATCTATGTTGTTTTTTAATACCGTGTCAAATGTCATTGATTTTCTCTCTTTTCTGTGTCTTTACTTCAAACTGTGCCAGGTTTTTGACCTTTCAGATGTGAATCCTCATGAGTTTGTTCAATATGGATTGAGTTGCCTGGAGAAGTTTGCTGCTCTTGGTGACAGTTGTGCAAAAGTGACTCGTGAAAGGATAAGAGTCGTGGTATGTATTTGATGTTACATGTAATTTGGACCCTTTTCAGTAGTTCAATAGTAGATTTTCAAATGCACTTCACTGGGATATTATAGAATTTATCGGAAAACTATTGCAAAAAGGAAATAGGAATTGAGGATTTATTTACTCCATCTGGTTTGGCAGGCAGCAGGAGGTGATGGCACCGTTGGATGGATTCTTGGCTGCCTTGGAGATCTTAAGAAACAGGGCCGAGAACCAGTTCCACCAACAGGAATAATCCCACTTGGCACAGGAAATGACTTATCCAGGAGTTTTGGATGGGTAAGCTTCTATGTGCATCAATTTTTCCATTCTTGTTCTATCTAGCCTTTATGAACTTCCCTAAAATCTACTTTTCAGGGGGGCTCATTTCCTTTTAACTGGAAGTCAGCCACAAAAAGTATTCTTGATAGAGTTGCAACAGGTCCAATTAACCGTCTGGATAGGTGATGCCTTTATGCATGGTTCTTGATAAACATATTTTCAAGTTTCATGATGATGATATTGCTTAACTTACAAGATGTTCAATTGAATTGCTGAGCGATGTTTTGGATTGAAGTATGATTTTCTTTTTGAATCTCTACTAAAAAAGATTGTTAATCTAAAACTAGCGACCAAATTTATTGAAGCCCTACTATTTGCCTTATATTTGCTCCTTGGTGCACAAGAATGGATTCCTTTTCTTTGTGTTATTACTTGACTGTTTATTTTTTTTAACTTTTCGGCGTGGAGGTAAAATTTCTACATCAAAATGACAGTAGGATGTCCAATATGCTCCTGATGAACATTTGCTTTTAGCAAACATAATGATAGGCAGAAAATATTACCTTTAGGAAGAATATATTTCATTTCTCTTTCTTCTTCAATTTCTATCTCAATAATTTGTGGCTTGTTTATACTCCGAGCTACTTCATGAAACTATAGCTTTCATTTGCAGTTGGAATCTTCTAATATCAATGCCAGCTGGGGATAAACTGGAAACACCTCATTCTCTGAAATCTACTGAGGATGCATCTCTTGATCAG</genome_strand>
        <mrna_strand>AAGACATGGTCCACAACTTAAAGCTAGGCTACAGGAACTCATGGGTGAAGAACAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTTTGACCTTTCAGATGTGATGCCTCATGAGTTTGTTCAATATGGATTGAGTTGCCTGGAGAAGTTTGCTGCTCTTGGTGACAGCTGTGCAAAAGTAACTCGTGAAAGGATAAGAGTCGTG............................................................................................................................................................GCAGCAGGAGGTGATGGCACCGTTGGATGGATTCTTGGCTGCCTTGGAGAGCTTAAGAAACAGGGTCGAGAGCCAGTTCCACCAACAGGAATAATCCCACTTGGCACAGGAAATGACTTATCCAGGAGTTTTGGATGG..............................................................................GGGGGCTCATTTCCTTTTAACTGGAAGTCAGCCACAAAAAGTATTCTTGATAGAGTTGCAACAGGTTCAATTAACCGTCTGGATAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGAATCTTCTAATATCAATGCCGGCTGGGGAAAAGCTGGAAACACCTCATTCTCTGAAACCTACTGAGGATGCATCTCTTGATCAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E329866" ref_strand="+" ref_description="SGN-E329866 [cTOD-3-D18]">
      <seq>aagaacaggtttttgacctttcagatgtgaatcctcatgagtttgttcaatatggattgagttgcctggagaagtttgctgctcttggtgacagttgtgcaaaagtgactcgtgaaaggataagagtcgtggcagcaggaggtgatggcaccgttggatggattcttggctgccttggagatcttaagaaacagggccgagaaccagttccaccaacaggaataatcccacttggcacaggaaatgacttatccaggagttttggatgggggggctcatttccttttaactggaagtcagccacaaaaagtattcttgatagagttgcaacaggtccaattaaccgtctggatagttggaatcttctaatatcaatgccagctggggataaactggaaacacctcattc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="+" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="84598" stop="86326"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="84901" g_stop="85023" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="9" r_stop="131" r_length="123" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="85024" i_stop="85179" i_length="156">
            <donor d_prob="0.972" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="85180" g_stop="85317" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="132" r_stop="269" r_length="138" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="85318" i_stop="85395" i_length="78">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="85396" g_stop="85481" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="270" r_stop="355" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="85482" i_stop="85972" i_length="491">
            <donor d_prob="0.930" d_score="1.00"/>
            <acceptor a_prob="0.971" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="85973" g_stop="86026" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="356" r_stop="409" r_length="54" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="+" ref_id="SGN-E329866" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>401</cumulative_length_of_scored_exons>
        <coverage percentage="0.980" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E329866" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="84901" e_stop="85023"/>
          <exon e_start="85180" e_stop="85317"/>
          <exon e_start="85396" e_stop="85481"/>
          <exon e_start="85973" e_stop="86026"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTTTTGACCTTTCAGATGTGAATCCTCATGAGTTTGTTCAATATGGATTGAGTTGCCTGGAGAAGTTTGCTGCTCTTGGTGACAGTTGTGCAAAAGTGACTCGTGAAAGGATAAGAGTCGTGGTATGTATTTGATGTTACATGTAATTTGGACCCTTTTCAGTAGTTCAATAGTAGATTTTCAAATGCACTTCACTGGGATATTATAGAATTTATCGGAAAACTATTGCAAAAAGGAAATAGGAATTGAGGATTTATTTACTCCATCTGGTTTGGCAGGCAGCAGGAGGTGATGGCACCGTTGGATGGATTCTTGGCTGCCTTGGAGATCTTAAGAAACAGGGCCGAGAACCAGTTCCACCAACAGGAATAATCCCACTTGGCACAGGAAATGACTTATCCAGGAGTTTTGGATGGGTAAGCTTCTATGTGCATCAATTTTTCCATTCTTGTTCTATCTAGCCTTTATGAACTTCCCTAAAATCTACTTTTCAGGGGGGCTCATTTCCTTTTAACTGGAAGTCAGCCACAAAAAGTATTCTTGATAGAGTTGCAACAGGTCCAATTAACCGTCTGGATAGGTGATGCCTTTATGCATGGTTCTTGATAAACATATTTTCAAGTTTCATGATGATGATATTGCTTAACTTACAAGATGTTCAATTGAATTGCTGAGCGATGTTTTGGATTGAAGTATGATTTTCTTTTTGAATCTCTACTAAAAAAGATTGTTAATCTAAAACTAGCGACCAAATTTATTGAAGCCCTACTATTTGCCTTATATTTGCTCCTTGGTGCACAAGAATGGATTCCTTTTCTTTGTGTTATTACTTGACTGTTTATTTTTTTTAACTTTTCGGCGTGGAGGTAAAATTTCTACATCAAAATGACAGTAGGATGTCCAATATGCTCCTGATGAACATTTGCTTTTAGCAAACATAATGATAGGCAGAAAATATTACCTTTAGGAAGAATATATTTCATTTCTCTTTCTTCTTCAATTTCTATCTCAATAATTTGTGGCTTGTTTATACTCCGAGCTACTTCATGAAACTATAGCTTTCATTTGCAGTTGGAATCTTCTAATATCAATGCCAGCTGGGGATAAACTGGAAACACCTCATTC</genome_strand>
        <mrna_strand>GTTTTTGACCTTTCAGATGTGAATCCTCATGAGTTTGTTCAATATGGATTGAGTTGCCTGGAGAAGTTTGCTGCTCTTGGTGACAGTTGTGCAAAAGTGACTCGTGAAAGGATAAGAGTCGTG............................................................................................................................................................GCAGCAGGAGGTGATGGCACCGTTGGATGGATTCTTGGCTGCCTTGGAGATCTTAAGAAACAGGGCCGAGAACCAGTTCCACCAACAGGAATAATCCCACTTGGCACAGGAAATGACTTATCCAGGAGTTTTGGATGG..............................................................................GGGGGCTCATTTCCTTTTAACTGGAAGTCAGCCACAAAAAGTATTCTTGATAGAGTTGCAACAGGTCCAATTAACCGTCTGGATAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGAATCTTCTAATATCAATGCCAGCTGGGGATAAACTGGAAACACCTCATTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E457231" ref_strand="+" ref_description="SGN-E457231 [cPRO-1-J10]">
      <seq>aggtgatggcaccgttggatggattcttggctgccttggagagcttaagaaacagggtcgagagccagttccaccaacaggaataatcccacttggcacaggaaatgacttatccaggagttttggatgggggggctcatttccttttaactggaagtcagccacaaaaagtattcttgatagagttgcaacagggtcaattaaccgtctggatagttggaatcttctaatatcaatgccggctggggaaaagctggaaacacctcattctctgaaacctactgaagatgcatctcttgatcaggaattggaaattgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="+" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="84888" stop="86361"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="85188" g_stop="85317" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="130" r_length="130" r_score="0.977"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="85318" i_stop="85395" i_length="78">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="85396" g_stop="85481" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="131" r_stop="216" r_length="86" r_score="0.977"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="85482" i_stop="85972" i_length="491">
            <donor d_prob="0.930" d_score="0.96"/>
            <acceptor a_prob="0.971" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="85973" g_stop="86060" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="217" r_stop="304" r_length="88" r_score="0.943"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="+" ref_id="SGN-E457231" ref_strand="+">
        <total_alignment_score>0.967</total_alignment_score>
        <cumulative_length_of_scored_exons>304</cumulative_length_of_scored_exons>
        <coverage percentage="0.953" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E457231" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="85188" e_stop="85317"/>
          <exon e_start="85396" e_stop="85481"/>
          <exon e_start="85973" e_stop="86060"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGTGATGGCACCGTTGGATGGATTCTTGGCTGCCTTGGAGATCTTAAGAAACAGGGCCGAGAACCAGTTCCACCAACAGGAATAATCCCACTTGGCACAGGAAATGACTTATCCAGGAGTTTTGGATGGGTAAGCTTCTATGTGCATCAATTTTTCCATTCTTGTTCTATCTAGCCTTTATGAACTTCCCTAAAATCTACTTTTCAGGGGGGCTCATTTCCTTTTAACTGGAAGTCAGCCACAAAAAGTATTCTTGATAGAGTTGCAACAGGTCCAATTAACCGTCTGGATAGGTGATGCCTTTATGCATGGTTCTTGATAAACATATTTTCAAGTTTCATGATGATGATATTGCTTAACTTACAAGATGTTCAATTGAATTGCTGAGCGATGTTTTGGATTGAAGTATGATTTTCTTTTTGAATCTCTACTAAAAAAGATTGTTAATCTAAAACTAGCGACCAAATTTATTGAAGCCCTACTATTTGCCTTATATTTGCTCCTTGGTGCACAAGAATGGATTCCTTTTCTTTGTGTTATTACTTGACTGTTTATTTTTTTTAACTTTTCGGCGTGGAGGTAAAATTTCTACATCAAAATGACAGTAGGATGTCCAATATGCTCCTGATGAACATTTGCTTTTAGCAAACATAATGATAGGCAGAAAATATTACCTTTAGGAAGAATATATTTCATTTCTCTTTCTTCTTCAATTTCTATCTCAATAATTTGTGGCTTGTTTATACTCCGAGCTACTTCATGAAACTATAGCTTTCATTTGCAGTTGGAATCTTCTAATATCAATGCCAGCTGGGGATAAACTGGAAACACCTCATTCTCTGAAATCTACTGAGGATGCATCTCTTGATCAG</genome_strand>
        <mrna_strand>AGGTGATGGCACCGTTGGATGGATTCTTGGCTGCCTTGGAGAGCTTAAGAAACAGGGTCGAGAGCCAGTTCCACCAACAGGAATAATCCCACTTGGCACAGGAAATGACTTATCCAGGAGTTTTGGATGG..............................................................................GGGGGCTCATTTCCTTTTAACTGGAAGTCAGCCACAAAAAGTATTCTTGATAGAGTTGCAACAGGGTCAATTAACCGTCTGGATAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGAATCTTCTAATATCAATGCCGGCTGGGGAAAAGCTGGAAACACCTCATTCTCTGAAACCTACTGAAGATGCATCTCTTGATCAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E407941" ref_strand="+" ref_description="SGN-E407941 [PPI-9-G22]">
      <seq>ttttggaatgggggggcttcatttccttttaacctggaagtcagccacaaaaagtattcttgatagaattgcaacaggttcaattaaccgtctggatagttggaatcttctaatatcaatgccggcttgggaaaagctgnaaacacctcattctctgaaacctactgaggatgcatctcttgatcaggaattggaaattgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="+" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="85095" stop="86361"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="85308" g_stop="85317" g_length="10"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="11" r_length="11" r_score="0.800"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="85318" i_stop="85395" i_length="78">
            <donor d_prob="0.998" d_score="0.00"/>
            <acceptor a_prob="0.975" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="85396" g_stop="85481" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="12" r_stop="99" r_length="88" r_score="0.930"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="85482" i_stop="85972" i_length="491">
            <donor d_prob="0.930" d_score="0.96"/>
            <acceptor a_prob="0.971" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="85973" g_stop="86060" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="100" r_stop="187" r_length="88" r_score="0.932"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="+" ref_id="SGN-E407941" ref_strand="+">
        <total_alignment_score>0.931</total_alignment_score>
        <cumulative_length_of_scored_exons>184</cumulative_length_of_scored_exons>
        <coverage percentage="0.911" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E407941" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="85308" e_stop="85317"/>
          <exon e_start="85396" e_stop="85481"/>
          <exon e_start="85973" e_stop="86060"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTGG-ATGGGTAAGCTTCTATGTGCATCAATTTTTCCATTCTTGTTCTATCTAGCCTTTATGAACTTCCCTAAAATCTACTTTTCAGGGGGGCT-CATTTCCTTTTAA-CTGGAAGTCAGCCACAAAAAGTATTCTTGATAGAGTTGCAACAGGTCCAATTAACCGTCTGGATAGGTGATGCCTTTATGCATGGTTCTTGATAAACATATTTTCAAGTTTCATGATGATGATATTGCTTAACTTACAAGATGTTCAATTGAATTGCTGAGCGATGTTTTGGATTGAAGTATGATTTTCTTTTTGAATCTCTACTAAAAAAGATTGTTAATCTAAAACTAGCGACCAAATTTATTGAAGCCCTACTATTTGCCTTATATTTGCTCCTTGGTGCACAAGAATGGATTCCTTTTCTTTGTGTTATTACTTGACTGTTTATTTTTTTTAACTTTTCGGCGTGGAGGTAAAATTTCTACATCAAAATGACAGTAGGATGTCCAATATGCTCCTGATGAACATTTGCTTTTAGCAAACATAATGATAGGCAGAAAATATTACCTTTAGGAAGAATATATTTCATTTCTCTTTCTTCTTCAATTTCTATCTCAATAATTTGTGGCTTGTTTATACTCCGAGCTACTTCATGAAACTATAGCTTTCATTTGCAGTTGGAATCTTCTAATATCAATGCCAGCTGGGGATAAACTGGAAACACCTCATTCTCTGAAATCTACTGAGGATGCATCTCTTGATCAG</genome_strand>
        <mrna_strand>TTTTGGAATGG..............................................................................GGGGGCTTCATTTCCTTTTAACCTGGAAGTCAGCCACAAAAAGTATTCTTGATAGAATTGCAACAGGTTCAATTAACCGTCTGGATAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGAATCTTCTAATATCAATGCCGGCTTGGGAAAAGCTGNAAACACCTCATTCTCTGAAACCTACTGAGGATGCATCTCTTGATCAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E726274" ref_strand="+" ref_description="SGN-E726274 [LA11BD07]">
      <seq>gccacaaaaagtattcttgatagagttgcaacaggtccaattaaccgtctggatagttggaatcttctaatatcaatgccagctggggataaactggaaacacctcattctctgaaatctactgaggatgcatctcttgatcaggaactggaaattgatagcgagttgcccaagaaattgtccaactatcaaggagtatactacaattactttagcataggaatggatgcacaggtagcttatggcttccatcatttacggaatgaaaaaccataccttgcacaaggtcccatatcaaacaagttgatttactcaggatatagttgcacgcaaggctggttctttacaccatgtagcagtgacccttgtttgaggggattgaataatattctgcgactgtatgttaagaaggtcaacagctcaaaatgggagaaaatctctgttccttcaagtgttcggtcaatagtcactcttaatctccctagctatggcggtggaaggaatccatggggacgtttgaagccagagtacttggagaagaggggttttgtggaagctcatgcagatgatggttgcattgaaatttttggcctgaaacaaggatggcatgcctctatggttatggttgagctcatttctgcaaaacacattgcccaggcttcagcaattcgatttgagttgcgtgcaggagagtgggatgaagcttatatgcagatggacggtgaaccatggaaacaaccaattagcaaggaatattcaaccttcattgaaattaagagagtaccatttcagtctctcatggttaacggcaagagaaattgatcttgtagntatctatattcatgtaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="+" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="85126" stop="92708"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="85426" g_stop="85481" g_length="56"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="56" r_length="56" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="85482" i_stop="85972" i_length="491">
            <donor d_prob="0.930" d_score="1.00"/>
            <acceptor a_prob="0.971" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="85973" g_stop="86060" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="57" r_stop="144" r_length="88" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="86061" i_stop="86442" i_length="382">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="86443" g_stop="86518" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="145" r_stop="220" r_length="76" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="86519" i_stop="87553" i_length="1035">
            <donor d_prob="0.068" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="87554" g_stop="87636" g_length="83"/>
          <reference_exon_boundary r_type="cDNA" r_start="221" r_stop="303" r_length="83" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="87637" i_stop="88765" i_length="1129">
            <donor d_prob="0.919" d_score="1.00"/>
            <acceptor a_prob="0.140" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="88766" g_stop="88836" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="304" r_stop="374" r_length="71" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="88837" i_stop="89343" i_length="507">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="89344" g_stop="89421" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="375" r_stop="452" r_length="78" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="89422" i_stop="90581" i_length="1160">
            <donor d_prob="0.949" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="90582" g_stop="90669" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="453" r_stop="540" r_length="88" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="90670" i_stop="91288" i_length="619">
            <donor d_prob="0.900" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="91289" g_stop="91405" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="541" r_stop="657" r_length="117" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="91406" i_stop="92216" i_length="811">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="92217" g_stop="92408" g_length="192"/>
          <reference_exon_boundary r_type="cDNA" r_start="658" r_stop="849" r_length="192" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="+" ref_id="SGN-E726274" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>849</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E726274" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="85426" e_stop="85481"/>
          <exon e_start="85973" e_stop="86060"/>
          <exon e_start="86443" e_stop="86518"/>
          <exon e_start="87554" e_stop="87636"/>
          <exon e_start="88766" e_stop="88836"/>
          <exon e_start="89344" e_stop="89421"/>
          <exon e_start="90582" e_stop="90669"/>
          <exon e_start="91289" e_stop="91405"/>
          <exon e_start="92217" e_stop="92408"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCCACAAAAAGTATTCTTGATAGAGTTGCAACAGGTCCAATTAACCGTCTGGATAGGTGATGCCTTTATGCATGGTTCTTGATAAACATATTTTCAAGTTTCATGATGATGATATTGCTTAACTTACAAGATGTTCAATTGAATTGCTGAGCGATGTTTTGGATTGAAGTATGATTTTCTTTTTGAATCTCTACTAAAAAAGATTGTTAATCTAAAACTAGCGACCAAATTTATTGAAGCCCTACTATTTGCCTTATATTTGCTCCTTGGTGCACAAGAATGGATTCCTTTTCTTTGTGTTATTACTTGACTGTTTATTTTTTTTAACTTTTCGGCGTGGAGGTAAAATTTCTACATCAAAATGACAGTAGGATGTCCAATATGCTCCTGATGAACATTTGCTTTTAGCAAACATAATGATAGGCAGAAAATATTACCTTTAGGAAGAATATATTTCATTTCTCTTTCTTCTTCAATTTCTATCTCAATAATTTGTGGCTTGTTTATACTCCGAGCTACTTCATGAAACTATAGCTTTCATTTGCAGTTGGAATCTTCTAATATCAATGCCAGCTGGGGATAAACTGGAAACACCTCATTCTCTGAAATCTACTGAGGATGCATCTCTTGATCAGGTCATTCTACATTTATTTTTACAAATTTGTTAACTGATATATGGACATGTCTAATTACTTTTGCTTTCTAATTACCTTGGCGTTAGACCTCAACTGGAATACATAGTGTTATACTATTTTGTGGGTGATTACTTATCTTTCCTCCATTGAGCTCATCGAGGGTTTTATTTGTTTGCTGATACTCCAACGGTTTTCTTTATTATTATTTCATCTTTATCTTCAATAAAATGCGCTTGCCAAATGGTCATTTAGCCAAGGAACTGCTGTAATGAATTTCTTTTTAAATTACGCTTTTACTTTTTCCATAATATGATTTATGATAAGCATATGTAATGTTTGTTTTCTGTTTTACTGATTTTTTTTCTGTGATTTTGTTGTGCAGGAACTGGAAATTGATAGCGAGTTGCCCAAGAAATTGTCCAACTATCAAGGAGTATACTACAATTACTTTAGCATAGGTATGACGATTAATAGATCATAGAAGTAATTAAACGTCAAGACTCATTTCACATTAGGGTTCACTTAGATTGTAAGAGAGCGTAAGATCTAATAAATTGTGTACTTCTATCTTGGAAAATCTTTGTATATAGTTTACATCACTAGCATTAATGTGAACTTTCGAAATCTTAATTCATAAACTTAGTCCATAATGTTTCATAGCAACCTGCTTACTCATCTCTACTTTCCATAATCCCTTTTGATTGTACTCTCCTTCCTCTCAGTAATTCAATGTCTAGACCCTCTTATGAGATCTTTTTCGAACTTTTTCTATTGCACTTACTTACATGCAGGTGAGAAATTATTTTATGTATAGATGCTGGTTTTGTTTGCTAAAGAGTAAAAGCTTGCCAGAATAAATACTATGTTAGCACCTCTCTTATATTTGCAATTTGCTTAGATTCGTAAAGGTTGAGGCTTCTCTTATGGTCAAACTAACTATAAGAGATCTCTTTTTATTTTTTTTAATCCAAGTACAACTTGTCTGAACTCTCTTCTTCTAATCAGCAAAACTGTCTTTTGTTTTTGCTTTTTTAACAAGGTAAGATTCTAACCCCTACCTTATCAAAAAAAGGATTACAGTGACATTCTATTGATGATAAACTAGCCTAATCTTTGCTGGAGAAGATTACACAGATAAATCGGATCAACAATTTGATGTAGAGTAGCATTTACATCATGTACAATTACCAGTCTGCACCGAAAAGATATACCTATGTTTAAGGCTAATAACATTTTGCCTTCGAATTCTGTATTCTTTTTGTCCACGCGGTCCACCAAATTGCGGGTGGAATTGAGTTCCATCTTCTTTTGCCTTCATTACTGATCCCTCTAAAATTTTTTCATATAAGTTTGTTAGTGAAGGATAAAAACATCTCTTTGTGAATCAGAATAGTTCATTCGGTTGTTACAATCATTTTCCCTCCCTCCCCCCATTTGGTCCACAAGATTTAAAGTTTGTGTTCGATAACTTGTATCTATAACTTTATATGCAGGAATGGATGCACAGGTAGCTTATGGCTTCCATCATTTACGGAATGAAAAACCATACCTTGCACAAGGTCCCATATCAAACAAGGTTGATGCTTCTTGTTCCTTGATCGTTAAATTTTTTGAAGTACTTATTAAGGGATCTCTTGATCTTTCTTTTTTCTCTTCCTATCACTCAATTGATTTGAGAAAGTGTATATGCTTGTCAAATGAAGAAATGTGGGCAACAACACATATCATAAGGAAAGCATTGAAGACATTCTATTTTTTTTTTGTTAGAACTAACAACCTCATGTTGCCAAATGGCGCTGCTACATTTCTTTATTAAAGAACTGATTATATGCAAACCGGACTCTTATATTATCTTCACGAATCCTTGTTGAATAATTAAAATTGTGGTTGCATTGTTGCATATTTTTAGAGTGGGTTAGAGTCCCACATTAGTTGGTGATGGACTAGTGGTCTGCTTATATGGACTTGGGCTATCTTCCCTCATAAGCTAGTTGAGTAAGACCTATGTGCTCCATATATTTTCATGGTATCAGAGCCAAGTCTGTTTCCAGTTTGGGCTGTCGGTCCACACTCCACTTGGGCGTGAAGGGGAGGGGTGTGGGTGTTAGAGTGGGTTATAGAGTCTCACATCGGTTGAGGAATGGGGACTTGGGAAATTCTCCCTCATAAGCTAGATTTTGGGGTTAAGTTTGCCCAAATGCCACATCTTTTCACATATAAATCCTTCAAGATACACTTAAAACCTATTAAAAATGAGAAGAATCTGTTTTGGATCTCTAAGACCACTACTGGTTTCCTGTGCTTGGGTTACTTTTAATAGGAAGTTCAAACTTTTCGGCGTCTCTTAAAATAAGGAGCACGTGTATTTAAGTAACTTCTAAAACTTCCATAACAGTCTTGTTGTATGGCCCTGTTTCTATTCATGCAATCATGTGTCATGAACTTATTTGAGATATCTCTTTGCGTGGATAGTGATTGTTAGCTGTTTTACTGCTCCTTTAATGAAGTGTATTGCCATCCTAGGATGTATTTTAGTTACTTTCCCTTTGTGTTTGTTACTTTGAACCTACATATATATATATATATATATATATTTTTTTTTTTTTTTACATTTCATGTTTCTAGCTGATATTTTAACTTTACGAAAGTGCTACTTTAGTTTCTTCAGACATAAGTTCTAGTTATTGACAAAGCATTTATTACAGTTGATTTACTCAGGATATAGTTGCACGCAAGGCTGGTTCTTTACACCATGTAGCAGTGACCCTTGTTTGAGGTAAGAATGACTCCCTCAACACCCATTGATCCATGATGCCTTTTAATTCATCACACTCTGGTAGTTGCCACATGCTTTATCAAAAGATGTTTCGTATGTACCTTCTTATGTTAATTATGTCAGTGTTTCATCCTCTCTTGTCCAATATATCATATATTGCTTTCCAAAGCTAGTATGCGCAGTATGTATGCCCTTGTGTGCAGGACAGCGGATATTCTTAGGCTTGAAAATAAAAGGTGTGACTGATACTCTATGATTGTAGTATTAAATCAATTAACTTGAAAATTGTTTGCCATGTATTCACCTCTGTATACTGATAACTCAGCATTAGTCTGGCAGTATTTATCATCATGTATGGTTATGCATAATCTGTTGAAAGAATAATGTATAATTTATGTCCCCTCCTACTCCTTCCAACACATAAACTTGGATAAAGTTGTACCCAATCATGCTTTTCAACTCTGATATTTTTTTTTAAGATTGTGTGCTTGATTTTATTGATGGCAGGGGATTGAATAATATTCTGCGACTGTATGTTAAGAAGGTCAACAGCTCAAAATGGGAGAAAATCTCTGTTCCTTCAAGGTTGATTTTTGTCCTGGAATATTTATTTGAGTGTTGTAATTTATGTTTGTCATGTAATGCAGAATCTCTTGGATAACTAACAATTATATGTGTTTCGTTGTTCTTGTTATTTGACAACTATATGAGTATCAACCTGCTAAGCCACAATATAAAATTTTGGGAAAGGGTGCTGGAGATGAGGATGAGTAGGGGTGTGTCTATCACGGAGAACAAATTTGTATTCATCCGGGCGTTTGACTACTGAAGTCATACATATCATTAGGAGATTGATGGATCAATATAGGGAGAAGAAGGACTTATATGAGAGTAGCTGAAATGATGTTGAGACAGAGTGTTGGCTGGTAAAAACTCGCATGTCCAAAAGATTAGAGTAGCTGAAATGATGTTGAGATGAATGTGTGGATATATGAAGAGAGATTGGATTAGGAACAAAGTTATCCGGGATAAAGTGGGAATGACTTCCGTAGTGGACAAGATGAGGGAGAAGAAACTGAGATTGTTTGGGCATGTGAAGAGAAGATACACATATGCTCTATTGAGGAGGTGTGAGAGGTTGGCTAGTGGTTATTAGAATAGGTAGAGGTAGGTCGAAGAAGTCAAGGAAGATGCGATTAGACAGAACATGAAATACCTGCAACTTGTTGAGGACATGAACCTTGATAGGAAGATATGAAAGTCGAGGATTAGAGTTGAAGGTTAATAGGAAGTCAATCATTGAATAGTTCCCTTCCCCGTATTGTTATTGTTACTATCTTACTAGCTTATTCGTCGATGTTAATGTTACATGGTATTTCATTTGCTTCAATTATGGTATTATTTGTTGTTATTTTTGTCATCTTTTTTATTGTTTTCAGCTTGACTTCCTTGCTACTGTATTTGCTTCACACTTGTCTCTTTAAAATGCTTTACTTGAGCCGAGGGTCCATTTGAAACAGTTTCTCTACCTTCACAAGGTAGGGCGAGACTACATGCACGCCACCCCCACCCTCCCCAAACCCTTCTTGTGATATTACACCGAGTATATTGTTTTGTTTTAGTTATTTGTCAAGTAGTCAATTATATTGTTCTGTAATATGAACTACAATGCTAATGCACCGGATGTTACATGTTTTTTTTTTTTTTAATTTGTGCAATCATTTTCCTGTTTTATCTTTTTGTAGTGTTCGGTCAATAGTCACTCTTAATCTCCCTAGCTATGGCGGTGGAAGGAATCCATGGGGACGTTTGAAGCCAGAGTACTTGGAGAAGGTATTCTTTTGTGTTAGCTGTGTAGGACTTCAGTGTATAAATTAATGATTACTTCCTGAATTCTACAAAGTAAATTAGTCATTTCTGAAACCAACGATAAACTAGGGTTATTTAGTTGGAAATTGCTGAATAGTTTAAATAGAATGTATTAGCTGTTCTGCTTAGGCTGTCAGACAAATATCTTTGTACAAAATTTTCAGTTTGCAAAATTTCTAAATTTGGTCCATATTCAGAAAAAATGTTTTCAGCTTCTTGACAACTTAATGTTTTTAGTACAACACTTATTTTATAGTCTGTAATCAGAGAAAATGATTGAGCTTCTAGTCACTTCAAGTTTTAGGTTCTGCATATTGTGTGTTTCCTCTACTAGCAATACATGATTTGAGCAAAAAACCCAAAGTCTCGTGGTATTTTTTCCCAAAGTTCTTGCAACTTGTAATTTTTAAACCTTTCAAAGATTAATTGATGTGTTTGTGCAGTTTATCACATATTCTCAGTTTTCAAACTTTCTCAGTTCCTAGAATGTGGTCATAATAAACTTCAAGATAACGGTAGGAAGTTGCAGCCACTTCACATCATCAAAAGTAACAATGAGTTTGTTTTTTCCTATGAAATGTAGAGGGGTTTTGTGGAAGCTCATGCAGATGATGGTTGCATTGAAATTTTTGGCCTGAAACAAGGATGGCATGCCTCTATGGTTATGGTTGAGCTCATTTCTGCAAAACACATTGCCCAGGTATTTATCAAATCTGGTAAATAAGAATTAGTGCAGCTTAGAGGCAATAAATTTAGATGTGTACGTGTTAACCCTTATTATGTGTCCTCCCTATTACATTTTGATCATGATAATCATTACATGCATTGCCTCATAAATTTTCCAACGAAAAAAACAAAGCGAGGAAGGGTTATATCTACTATCACTGGAAATTCCTGTTGCTGTACTAACTCCAGCTAAGTTTCTCCATCGTCTGTCTAAGGTAAGGCCCTTGCATCACGCAAGGATATCTACATACACCTGATAATGGTCATTCGGGCATCTGTATGAGGCTCTCGTTTTTATTAGGGTTGATAAACCAGTTGTCCTCATTTTGGACAATAAATTGTTAATACATCCTAACGCGAGTCCCTCCCAAAGAGATAATAGAGTTGAAAGAGAGGGGATATGGTAAATTGAGAGAGCATATCTGGTTCTATATTATATGAACTTGGAGGAAGTACATTCACTAGAACACATCCAAAACAGATGGTAATTACTTACGTCTCATTGAATTAAGCAAAAACTATTTTAGAACCAAAACCTTTTCTGGACAAGATAAACTCTTACTTGGCCATCTCATTTATCTGAATTTCAACGCTGTTTAAACAGTTGGCTTTCTGTAAAAATCGATAGGTAACATGTGTGGATTTGTTGTCTCTCTCTCTCTTGCAGAATGTCATATGAGTTTCTCATCGTTTTGTTGGGATCACATTTGTTCTTGATGAGATTGTTCTAGTTATTCCTAGGTGGAAATTTGTTCTTAATGAACACTTGTTTTGCTACTTTGTAGGCTTCAGCAATTCGATTTGAGTTGCGTGCAGGAGAGTGGGATGAAGCTTATATGCAGATGGACGGTGAACCATGGAAACAACCAATTAGCAAGGAATATTCAACCTTCATTGAAATTAAGAGAGTACCATTTCAGTCTCTCATGGTTAACGGCAAGAGAAATTGATCTTGTAGTTATCTATATTCATGTAAA</genome_strand>
        <mrna_strand>GCCACAAAAAGTATTCTTGATAGAGTTGCAACAGGTCCAATTAACCGTCTGGATAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGAATCTTCTAATATCAATGCCAGCTGGGGATAAACTGGAAACACCTCATTCTCTGAAATCTACTGAGGATGCATCTCTTGATCAG..............................................................................................................................................................................................................................................................................................................................................................................................GAACTGGAAATTGATAGCGAGTTGCCCAAGAAATTGTCCAACTATCAAGGAGTATACTACAATTACTTTAGCATAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATGGATGCACAGGTAGCTTATGGCTTCCATCATTTACGGAATGAAAAACCATACCTTGCACAAGGTCCCATATCAAACAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATTTACTCAGGATATAGTTGCACGCAAGGCTGGTTCTTTACACCATGTAGCAGTGACCCTTGTTTGAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGATTGAATAATATTCTGCGACTGTATGTTAAGAAGGTCAACAGCTCAAAATGGGAGAAAATCTCTGTTCCTTCAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTCGGTCAATAGTCACTCTTAATCTCCCTAGCTATGGCGGTGGAAGGAATCCATGGGGACGTTTGAAGCCAGAGTACTTGGAGAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGGGTTTTGTGGAAGCTCATGCAGATGATGGTTGCATTGAAATTTTTGGCCTGAAACAAGGATGGCATGCCTCTATGGTTATGGTTGAGCTCATTTCTGCAAAACACATTGCCCAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTCAGCAATTCGATTTGAGTTGCGTGCAGGAGAGTGGGATGAAGCTTATATGCAGATGGACGGTGAACCATGGAAACAACCAATTAGCAAGGAATATTCAACCTTCATTGAAATTAAGAGAGTACCATTTCAGTCTCTCATGGTTAACGGCAAGAGAAATTGATCTTGTAGNTATCTATATTCATGTAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E206904" ref_strand="+" ref_description="SGN-E206904 [cLEC-33-L20]">
      <seq>aggtccaattaaccgtctggatagttggaatcttctaatatcaatgccagctggggataaactggaaacacctcattctctgaaatctactgaggatgcatctcttgatcaggaactggaaattgatagcgagttgcccaagaaattgtccaactatcaaggagtatactacaattactttagcataggaatggatgcacaggtagcttatggcttccatcatttacggaatgaaaaaccataccttgcacaaggtcccatatcaaacaagttgatttactcaggatatagttgcacgcaaggctggttctttacaccatgtagcagtgacccttgtttgaggggattgaataatattctgcgactgtatgttaagaaggtcaacagctcaaaatgggagaaaatctctgttccttcaagtgttcggtcaatagtcactcttaatctccctagctatggcggtggaaggaatccatggggacgtttgaagccagagtacttggagaagaggggttttgtggaagctcatgcagatgatggttgcattgaaatttttggcctgaaacaaggatggcatgcctctat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="+" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="85158" stop="91665"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="85458" g_stop="85481" g_length="24"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="24" r_length="24" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="85482" i_stop="85972" i_length="491">
            <donor d_prob="0.930" d_score="0.00"/>
            <acceptor a_prob="0.971" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="85973" g_stop="86060" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="25" r_stop="112" r_length="88" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="86061" i_stop="86442" i_length="382">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="86443" g_stop="86518" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="113" r_stop="188" r_length="76" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="86519" i_stop="87553" i_length="1035">
            <donor d_prob="0.068" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="87554" g_stop="87636" g_length="83"/>
          <reference_exon_boundary r_type="cDNA" r_start="189" r_stop="271" r_length="83" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="87637" i_stop="88765" i_length="1129">
            <donor d_prob="0.919" d_score="1.00"/>
            <acceptor a_prob="0.140" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="88766" g_stop="88836" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="272" r_stop="342" r_length="71" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="88837" i_stop="89343" i_length="507">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="89344" g_stop="89421" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="343" r_stop="420" r_length="78" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="89422" i_stop="90581" i_length="1160">
            <donor d_prob="0.949" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="90582" g_stop="90669" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="421" r_stop="508" r_length="88" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="90670" i_stop="91288" i_length="619">
            <donor d_prob="0.900" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="91289" g_stop="91365" g_length="77"/>
          <reference_exon_boundary r_type="cDNA" r_start="509" r_stop="585" r_length="77" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="+" ref_id="SGN-E206904" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>585</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E206904" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="85458" e_stop="85481"/>
          <exon e_start="85973" e_stop="86060"/>
          <exon e_start="86443" e_stop="86518"/>
          <exon e_start="87554" e_stop="87636"/>
          <exon e_start="88766" e_stop="88836"/>
          <exon e_start="89344" e_stop="89421"/>
          <exon e_start="90582" e_stop="90669"/>
          <exon e_start="91289" e_stop="91365"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGTCCAATTAACCGTCTGGATAGGTGATGCCTTTATGCATGGTTCTTGATAAACATATTTTCAAGTTTCATGATGATGATATTGCTTAACTTACAAGATGTTCAATTGAATTGCTGAGCGATGTTTTGGATTGAAGTATGATTTTCTTTTTGAATCTCTACTAAAAAAGATTGTTAATCTAAAACTAGCGACCAAATTTATTGAAGCCCTACTATTTGCCTTATATTTGCTCCTTGGTGCACAAGAATGGATTCCTTTTCTTTGTGTTATTACTTGACTGTTTATTTTTTTTAACTTTTCGGCGTGGAGGTAAAATTTCTACATCAAAATGACAGTAGGATGTCCAATATGCTCCTGATGAACATTTGCTTTTAGCAAACATAATGATAGGCAGAAAATATTACCTTTAGGAAGAATATATTTCATTTCTCTTTCTTCTTCAATTTCTATCTCAATAATTTGTGGCTTGTTTATACTCCGAGCTACTTCATGAAACTATAGCTTTCATTTGCAGTTGGAATCTTCTAATATCAATGCCAGCTGGGGATAAACTGGAAACACCTCATTCTCTGAAATCTACTGAGGATGCATCTCTTGATCAGGTCATTCTACATTTATTTTTACAAATTTGTTAACTGATATATGGACATGTCTAATTACTTTTGCTTTCTAATTACCTTGGCGTTAGACCTCAACTGGAATACATAGTGTTATACTATTTTGTGGGTGATTACTTATCTTTCCTCCATTGAGCTCATCGAGGGTTTTATTTGTTTGCTGATACTCCAACGGTTTTCTTTATTATTATTTCATCTTTATCTTCAATAAAATGCGCTTGCCAAATGGTCATTTAGCCAAGGAACTGCTGTAATGAATTTCTTTTTAAATTACGCTTTTACTTTTTCCATAATATGATTTATGATAAGCATATGTAATGTTTGTTTTCTGTTTTACTGATTTTTTTTCTGTGATTTTGTTGTGCAGGAACTGGAAATTGATAGCGAGTTGCCCAAGAAATTGTCCAACTATCAAGGAGTATACTACAATTACTTTAGCATAGGTATGACGATTAATAGATCATAGAAGTAATTAAACGTCAAGACTCATTTCACATTAGGGTTCACTTAGATTGTAAGAGAGCGTAAGATCTAATAAATTGTGTACTTCTATCTTGGAAAATCTTTGTATATAGTTTACATCACTAGCATTAATGTGAACTTTCGAAATCTTAATTCATAAACTTAGTCCATAATGTTTCATAGCAACCTGCTTACTCATCTCTACTTTCCATAATCCCTTTTGATTGTACTCTCCTTCCTCTCAGTAATTCAATGTCTAGACCCTCTTATGAGATCTTTTTCGAACTTTTTCTATTGCACTTACTTACATGCAGGTGAGAAATTATTTTATGTATAGATGCTGGTTTTGTTTGCTAAAGAGTAAAAGCTTGCCAGAATAAATACTATGTTAGCACCTCTCTTATATTTGCAATTTGCTTAGATTCGTAAAGGTTGAGGCTTCTCTTATGGTCAAACTAACTATAAGAGATCTCTTTTTATTTTTTTTAATCCAAGTACAACTTGTCTGAACTCTCTTCTTCTAATCAGCAAAACTGTCTTTTGTTTTTGCTTTTTTAACAAGGTAAGATTCTAACCCCTACCTTATCAAAAAAAGGATTACAGTGACATTCTATTGATGATAAACTAGCCTAATCTTTGCTGGAGAAGATTACACAGATAAATCGGATCAACAATTTGATGTAGAGTAGCATTTACATCATGTACAATTACCAGTCTGCACCGAAAAGATATACCTATGTTTAAGGCTAATAACATTTTGCCTTCGAATTCTGTATTCTTTTTGTCCACGCGGTCCACCAAATTGCGGGTGGAATTGAGTTCCATCTTCTTTTGCCTTCATTACTGATCCCTCTAAAATTTTTTCATATAAGTTTGTTAGTGAAGGATAAAAACATCTCTTTGTGAATCAGAATAGTTCATTCGGTTGTTACAATCATTTTCCCTCCCTCCCCCCATTTGGTCCACAAGATTTAAAGTTTGTGTTCGATAACTTGTATCTATAACTTTATATGCAGGAATGGATGCACAGGTAGCTTATGGCTTCCATCATTTACGGAATGAAAAACCATACCTTGCACAAGGTCCCATATCAAACAAGGTTGATGCTTCTTGTTCCTTGATCGTTAAATTTTTTGAAGTACTTATTAAGGGATCTCTTGATCTTTCTTTTTTCTCTTCCTATCACTCAATTGATTTGAGAAAGTGTATATGCTTGTCAAATGAAGAAATGTGGGCAACAACACATATCATAAGGAAAGCATTGAAGACATTCTATTTTTTTTTTGTTAGAACTAACAACCTCATGTTGCCAAATGGCGCTGCTACATTTCTTTATTAAAGAACTGATTATATGCAAACCGGACTCTTATATTATCTTCACGAATCCTTGTTGAATAATTAAAATTGTGGTTGCATTGTTGCATATTTTTAGAGTGGGTTAGAGTCCCACATTAGTTGGTGATGGACTAGTGGTCTGCTTATATGGACTTGGGCTATCTTCCCTCATAAGCTAGTTGAGTAAGACCTATGTGCTCCATATATTTTCATGGTATCAGAGCCAAGTCTGTTTCCAGTTTGGGCTGTCGGTCCACACTCCACTTGGGCGTGAAGGGGAGGGGTGTGGGTGTTAGAGTGGGTTATAGAGTCTCACATCGGTTGAGGAATGGGGACTTGGGAAATTCTCCCTCATAAGCTAGATTTTGGGGTTAAGTTTGCCCAAATGCCACATCTTTTCACATATAAATCCTTCAAGATACACTTAAAACCTATTAAAAATGAGAAGAATCTGTTTTGGATCTCTAAGACCACTACTGGTTTCCTGTGCTTGGGTTACTTTTAATAGGAAGTTCAAACTTTTCGGCGTCTCTTAAAATAAGGAGCACGTGTATTTAAGTAACTTCTAAAACTTCCATAACAGTCTTGTTGTATGGCCCTGTTTCTATTCATGCAATCATGTGTCATGAACTTATTTGAGATATCTCTTTGCGTGGATAGTGATTGTTAGCTGTTTTACTGCTCCTTTAATGAAGTGTATTGCCATCCTAGGATGTATTTTAGTTACTTTCCCTTTGTGTTTGTTACTTTGAACCTACATATATATATATATATATATATATTTTTTTTTTTTTTTACATTTCATGTTTCTAGCTGATATTTTAACTTTACGAAAGTGCTACTTTAGTTTCTTCAGACATAAGTTCTAGTTATTGACAAAGCATTTATTACAGTTGATTTACTCAGGATATAGTTGCACGCAAGGCTGGTTCTTTACACCATGTAGCAGTGACCCTTGTTTGAGGTAAGAATGACTCCCTCAACACCCATTGATCCATGATGCCTTTTAATTCATCACACTCTGGTAGTTGCCACATGCTTTATCAAAAGATGTTTCGTATGTACCTTCTTATGTTAATTATGTCAGTGTTTCATCCTCTCTTGTCCAATATATCATATATTGCTTTCCAAAGCTAGTATGCGCAGTATGTATGCCCTTGTGTGCAGGACAGCGGATATTCTTAGGCTTGAAAATAAAAGGTGTGACTGATACTCTATGATTGTAGTATTAAATCAATTAACTTGAAAATTGTTTGCCATGTATTCACCTCTGTATACTGATAACTCAGCATTAGTCTGGCAGTATTTATCATCATGTATGGTTATGCATAATCTGTTGAAAGAATAATGTATAATTTATGTCCCCTCCTACTCCTTCCAACACATAAACTTGGATAAAGTTGTACCCAATCATGCTTTTCAACTCTGATATTTTTTTTTAAGATTGTGTGCTTGATTTTATTGATGGCAGGGGATTGAATAATATTCTGCGACTGTATGTTAAGAAGGTCAACAGCTCAAAATGGGAGAAAATCTCTGTTCCTTCAAGGTTGATTTTTGTCCTGGAATATTTATTTGAGTGTTGTAATTTATGTTTGTCATGTAATGCAGAATCTCTTGGATAACTAACAATTATATGTGTTTCGTTGTTCTTGTTATTTGACAACTATATGAGTATCAACCTGCTAAGCCACAATATAAAATTTTGGGAAAGGGTGCTGGAGATGAGGATGAGTAGGGGTGTGTCTATCACGGAGAACAAATTTGTATTCATCCGGGCGTTTGACTACTGAAGTCATACATATCATTAGGAGATTGATGGATCAATATAGGGAGAAGAAGGACTTATATGAGAGTAGCTGAAATGATGTTGAGACAGAGTGTTGGCTGGTAAAAACTCGCATGTCCAAAAGATTAGAGTAGCTGAAATGATGTTGAGATGAATGTGTGGATATATGAAGAGAGATTGGATTAGGAACAAAGTTATCCGGGATAAAGTGGGAATGACTTCCGTAGTGGACAAGATGAGGGAGAAGAAACTGAGATTGTTTGGGCATGTGAAGAGAAGATACACATATGCTCTATTGAGGAGGTGTGAGAGGTTGGCTAGTGGTTATTAGAATAGGTAGAGGTAGGTCGAAGAAGTCAAGGAAGATGCGATTAGACAGAACATGAAATACCTGCAACTTGTTGAGGACATGAACCTTGATAGGAAGATATGAAAGTCGAGGATTAGAGTTGAAGGTTAATAGGAAGTCAATCATTGAATAGTTCCCTTCCCCGTATTGTTATTGTTACTATCTTACTAGCTTATTCGTCGATGTTAATGTTACATGGTATTTCATTTGCTTCAATTATGGTATTATTTGTTGTTATTTTTGTCATCTTTTTTATTGTTTTCAGCTTGACTTCCTTGCTACTGTATTTGCTTCACACTTGTCTCTTTAAAATGCTTTACTTGAGCCGAGGGTCCATTTGAAACAGTTTCTCTACCTTCACAAGGTAGGGCGAGACTACATGCACGCCACCCCCACCCTCCCCAAACCCTTCTTGTGATATTACACCGAGTATATTGTTTTGTTTTAGTTATTTGTCAAGTAGTCAATTATATTGTTCTGTAATATGAACTACAATGCTAATGCACCGGATGTTACATGTTTTTTTTTTTTTTAATTTGTGCAATCATTTTCCTGTTTTATCTTTTTGTAGTGTTCGGTCAATAGTCACTCTTAATCTCCCTAGCTATGGCGGTGGAAGGAATCCATGGGGACGTTTGAAGCCAGAGTACTTGGAGAAGGTATTCTTTTGTGTTAGCTGTGTAGGACTTCAGTGTATAAATTAATGATTACTTCCTGAATTCTACAAAGTAAATTAGTCATTTCTGAAACCAACGATAAACTAGGGTTATTTAGTTGGAAATTGCTGAATAGTTTAAATAGAATGTATTAGCTGTTCTGCTTAGGCTGTCAGACAAATATCTTTGTACAAAATTTTCAGTTTGCAAAATTTCTAAATTTGGTCCATATTCAGAAAAAATGTTTTCAGCTTCTTGACAACTTAATGTTTTTAGTACAACACTTATTTTATAGTCTGTAATCAGAGAAAATGATTGAGCTTCTAGTCACTTCAAGTTTTAGGTTCTGCATATTGTGTGTTTCCTCTACTAGCAATACATGATTTGAGCAAAAAACCCAAAGTCTCGTGGTATTTTTTCCCAAAGTTCTTGCAACTTGTAATTTTTAAACCTTTCAAAGATTAATTGATGTGTTTGTGCAGTTTATCACATATTCTCAGTTTTCAAACTTTCTCAGTTCCTAGAATGTGGTCATAATAAACTTCAAGATAACGGTAGGAAGTTGCAGCCACTTCACATCATCAAAAGTAACAATGAGTTTGTTTTTTCCTATGAAATGTAGAGGGGTTTTGTGGAAGCTCATGCAGATGATGGTTGCATTGAAATTTTTGGCCTGAAACAAGGATGGCATGCCTCTAT</genome_strand>
        <mrna_strand>AGGTCCAATTAACCGTCTGGATAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGAATCTTCTAATATCAATGCCAGCTGGGGATAAACTGGAAACACCTCATTCTCTGAAATCTACTGAGGATGCATCTCTTGATCAG..............................................................................................................................................................................................................................................................................................................................................................................................GAACTGGAAATTGATAGCGAGTTGCCCAAGAAATTGTCCAACTATCAAGGAGTATACTACAATTACTTTAGCATAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATGGATGCACAGGTAGCTTATGGCTTCCATCATTTACGGAATGAAAAACCATACCTTGCACAAGGTCCCATATCAAACAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATTTACTCAGGATATAGTTGCACGCAAGGCTGGTTCTTTACACCATGTAGCAGTGACCCTTGTTTGAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGATTGAATAATATTCTGCGACTGTATGTTAAGAAGGTCAACAGCTCAAAATGGGAGAAAATCTCTGTTCCTTCAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTCGGTCAATAGTCACTCTTAATCTCCCTAGCTATGGCGGTGGAAGGAATCCATGGGGACGTTTGAAGCCAGAGTACTTGGAGAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGGGTTTTGTGGAAGCTCATGCAGATGATGGTTGCATTGAAATTTTTGGCCTGAAACAAGGATGGCATGCCTCTAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E408732" ref_strand="+" ref_description="SGN-E408732 [PPI-12-E9]">
      <seq>cttgatcaggaattgaaaattgatggtgagttgcccaagaagttgtccaactatcaaggagtatactacaattactttagcataggaatggatgcacaggtagcatatggcttccatcatttacggaatgaaaaaccataccttgcacaaggtcccatatcaaacaagttgatttactcaggatatagttgcacgcaaggctggttctttacaccatgtagcagtgacccttgtttgaggggattgaataatattttgcgactgtatgttaagaaggtcaacagctcaaagtgggagcaaatctctgttccttcaagtgtccggtcaatagtcactctgaatctccctagctatggaggtggaaggaatccatggggacgtttgaagccagagtacttggagaagaggggttttgtggatgcccatgcagatgatggttgcattgaaatttttggcctgaaacaaggatggcatgcctctatggttatggttgagctcatttctgcaaaacacattgcccaggcttcagcaattagatttgagttgcgtgcaggagagtgggatgaagcttatatgcagatggacggtgagccatggaaacaaccaattagcaaggaatattcaaccttcattgaaattaagagagtaccatttcagtctctcatggttaacgggaaaagaaattgatcgttcttctcttgtcatttccagatcttcttagaattatagtatctatgttcgtgtaaagtatttcgatctcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="+" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="86135" stop="92701"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="86434" g_stop="86518" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="85" r_length="85" r_score="0.906"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="86519" i_stop="87553" i_length="1035">
            <donor d_prob="0.068" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="87554" g_stop="87636" g_length="83"/>
          <reference_exon_boundary r_type="cDNA" r_start="86" r_stop="168" r_length="83" r_score="0.988"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="87637" i_stop="88765" i_length="1129">
            <donor d_prob="0.919" d_score="1.00"/>
            <acceptor a_prob="0.140" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="88766" g_stop="88836" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="169" r_stop="239" r_length="71" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="88837" i_stop="89343" i_length="507">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="89344" g_stop="89421" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="240" r_stop="317" r_length="78" r_score="0.962"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="89422" i_stop="90581" i_length="1160">
            <donor d_prob="0.949" d_score="0.96"/>
            <acceptor a_prob="0.998" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="90582" g_stop="90669" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="318" r_stop="405" r_length="88" r_score="0.966"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="90670" i_stop="91288" i_length="619">
            <donor d_prob="0.900" d_score="0.98"/>
            <acceptor a_prob="0.991" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="91289" g_stop="91405" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="406" r_stop="522" r_length="117" r_score="0.983"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="91406" i_stop="92216" i_length="811">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="92217" g_stop="92385" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="523" r_stop="691" r_length="169" r_score="0.970"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="+" ref_id="SGN-E408732" ref_strand="+">
        <total_alignment_score>0.968</total_alignment_score>
        <cumulative_length_of_scored_exons>691</cumulative_length_of_scored_exons>
        <coverage percentage="0.908" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E408732" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="86434" e_stop="86518"/>
          <exon e_start="87554" e_stop="87636"/>
          <exon e_start="88766" e_stop="88836"/>
          <exon e_start="89344" e_stop="89421"/>
          <exon e_start="90582" e_stop="90669"/>
          <exon e_start="91289" e_stop="91405"/>
          <exon e_start="92217" e_stop="92385"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTGTGCAGGAACTGGAAATTGATAGCGAGTTGCCCAAGAAATTGTCCAACTATCAAGGAGTATACTACAATTACTTTAGCATAGGTATGACGATTAATAGATCATAGAAGTAATTAAACGTCAAGACTCATTTCACATTAGGGTTCACTTAGATTGTAAGAGAGCGTAAGATCTAATAAATTGTGTACTTCTATCTTGGAAAATCTTTGTATATAGTTTACATCACTAGCATTAATGTGAACTTTCGAAATCTTAATTCATAAACTTAGTCCATAATGTTTCATAGCAACCTGCTTACTCATCTCTACTTTCCATAATCCCTTTTGATTGTACTCTCCTTCCTCTCAGTAATTCAATGTCTAGACCCTCTTATGAGATCTTTTTCGAACTTTTTCTATTGCACTTACTTACATGCAGGTGAGAAATTATTTTATGTATAGATGCTGGTTTTGTTTGCTAAAGAGTAAAAGCTTGCCAGAATAAATACTATGTTAGCACCTCTCTTATATTTGCAATTTGCTTAGATTCGTAAAGGTTGAGGCTTCTCTTATGGTCAAACTAACTATAAGAGATCTCTTTTTATTTTTTTTAATCCAAGTACAACTTGTCTGAACTCTCTTCTTCTAATCAGCAAAACTGTCTTTTGTTTTTGCTTTTTTAACAAGGTAAGATTCTAACCCCTACCTTATCAAAAAAAGGATTACAGTGACATTCTATTGATGATAAACTAGCCTAATCTTTGCTGGAGAAGATTACACAGATAAATCGGATCAACAATTTGATGTAGAGTAGCATTTACATCATGTACAATTACCAGTCTGCACCGAAAAGATATACCTATGTTTAAGGCTAATAACATTTTGCCTTCGAATTCTGTATTCTTTTTGTCCACGCGGTCCACCAAATTGCGGGTGGAATTGAGTTCCATCTTCTTTTGCCTTCATTACTGATCCCTCTAAAATTTTTTCATATAAGTTTGTTAGTGAAGGATAAAAACATCTCTTTGTGAATCAGAATAGTTCATTCGGTTGTTACAATCATTTTCCCTCCCTCCCCCCATTTGGTCCACAAGATTTAAAGTTTGTGTTCGATAACTTGTATCTATAACTTTATATGCAGGAATGGATGCACAGGTAGCTTATGGCTTCCATCATTTACGGAATGAAAAACCATACCTTGCACAAGGTCCCATATCAAACAAGGTTGATGCTTCTTGTTCCTTGATCGTTAAATTTTTTGAAGTACTTATTAAGGGATCTCTTGATCTTTCTTTTTTCTCTTCCTATCACTCAATTGATTTGAGAAAGTGTATATGCTTGTCAAATGAAGAAATGTGGGCAACAACACATATCATAAGGAAAGCATTGAAGACATTCTATTTTTTTTTTGTTAGAACTAACAACCTCATGTTGCCAAATGGCGCTGCTACATTTCTTTATTAAAGAACTGATTATATGCAAACCGGACTCTTATATTATCTTCACGAATCCTTGTTGAATAATTAAAATTGTGGTTGCATTGTTGCATATTTTTAGAGTGGGTTAGAGTCCCACATTAGTTGGTGATGGACTAGTGGTCTGCTTATATGGACTTGGGCTATCTTCCCTCATAAGCTAGTTGAGTAAGACCTATGTGCTCCATATATTTTCATGGTATCAGAGCCAAGTCTGTTTCCAGTTTGGGCTGTCGGTCCACACTCCACTTGGGCGTGAAGGGGAGGGGTGTGGGTGTTAGAGTGGGTTATAGAGTCTCACATCGGTTGAGGAATGGGGACTTGGGAAATTCTCCCTCATAAGCTAGATTTTGGGGTTAAGTTTGCCCAAATGCCACATCTTTTCACATATAAATCCTTCAAGATACACTTAAAACCTATTAAAAATGAGAAGAATCTGTTTTGGATCTCTAAGACCACTACTGGTTTCCTGTGCTTGGGTTACTTTTAATAGGAAGTTCAAACTTTTCGGCGTCTCTTAAAATAAGGAGCACGTGTATTTAAGTAACTTCTAAAACTTCCATAACAGTCTTGTTGTATGGCCCTGTTTCTATTCATGCAATCATGTGTCATGAACTTATTTGAGATATCTCTTTGCGTGGATAGTGATTGTTAGCTGTTTTACTGCTCCTTTAATGAAGTGTATTGCCATCCTAGGATGTATTTTAGTTACTTTCCCTTTGTGTTTGTTACTTTGAACCTACATATATATATATATATATATATATTTTTTTTTTTTTTTACATTTCATGTTTCTAGCTGATATTTTAACTTTACGAAAGTGCTACTTTAGTTTCTTCAGACATAAGTTCTAGTTATTGACAAAGCATTTATTACAGTTGATTTACTCAGGATATAGTTGCACGCAAGGCTGGTTCTTTACACCATGTAGCAGTGACCCTTGTTTGAGGTAAGAATGACTCCCTCAACACCCATTGATCCATGATGCCTTTTAATTCATCACACTCTGGTAGTTGCCACATGCTTTATCAAAAGATGTTTCGTATGTACCTTCTTATGTTAATTATGTCAGTGTTTCATCCTCTCTTGTCCAATATATCATATATTGCTTTCCAAAGCTAGTATGCGCAGTATGTATGCCCTTGTGTGCAGGACAGCGGATATTCTTAGGCTTGAAAATAAAAGGTGTGACTGATACTCTATGATTGTAGTATTAAATCAATTAACTTGAAAATTGTTTGCCATGTATTCACCTCTGTATACTGATAACTCAGCATTAGTCTGGCAGTATTTATCATCATGTATGGTTATGCATAATCTGTTGAAAGAATAATGTATAATTTATGTCCCCTCCTACTCCTTCCAACACATAAACTTGGATAAAGTTGTACCCAATCATGCTTTTCAACTCTGATATTTTTTTTTAAGATTGTGTGCTTGATTTTATTGATGGCAGGGGATTGAATAATATTCTGCGACTGTATGTTAAGAAGGTCAACAGCTCAAAATGGGAGAAAATCTCTGTTCCTTCAAGGTTGATTTTTGTCCTGGAATATTTATTTGAGTGTTGTAATTTATGTTTGTCATGTAATGCAGAATCTCTTGGATAACTAACAATTATATGTGTTTCGTTGTTCTTGTTATTTGACAACTATATGAGTATCAACCTGCTAAGCCACAATATAAAATTTTGGGAAAGGGTGCTGGAGATGAGGATGAGTAGGGGTGTGTCTATCACGGAGAACAAATTTGTATTCATCCGGGCGTTTGACTACTGAAGTCATACATATCATTAGGAGATTGATGGATCAATATAGGGAGAAGAAGGACTTATATGAGAGTAGCTGAAATGATGTTGAGACAGAGTGTTGGCTGGTAAAAACTCGCATGTCCAAAAGATTAGAGTAGCTGAAATGATGTTGAGATGAATGTGTGGATATATGAAGAGAGATTGGATTAGGAACAAAGTTATCCGGGATAAAGTGGGAATGACTTCCGTAGTGGACAAGATGAGGGAGAAGAAACTGAGATTGTTTGGGCATGTGAAGAGAAGATACACATATGCTCTATTGAGGAGGTGTGAGAGGTTGGCTAGTGGTTATTAGAATAGGTAGAGGTAGGTCGAAGAAGTCAAGGAAGATGCGATTAGACAGAACATGAAATACCTGCAACTTGTTGAGGACATGAACCTTGATAGGAAGATATGAAAGTCGAGGATTAGAGTTGAAGGTTAATAGGAAGTCAATCATTGAATAGTTCCCTTCCCCGTATTGTTATTGTTACTATCTTACTAGCTTATTCGTCGATGTTAATGTTACATGGTATTTCATTTGCTTCAATTATGGTATTATTTGTTGTTATTTTTGTCATCTTTTTTATTGTTTTCAGCTTGACTTCCTTGCTACTGTATTTGCTTCACACTTGTCTCTTTAAAATGCTTTACTTGAGCCGAGGGTCCATTTGAAACAGTTTCTCTACCTTCACAAGGTAGGGCGAGACTACATGCACGCCACCCCCACCCTCCCCAAACCCTTCTTGTGATATTACACCGAGTATATTGTTTTGTTTTAGTTATTTGTCAAGTAGTCAATTATATTGTTCTGTAATATGAACTACAATGCTAATGCACCGGATGTTACATGTTTTTTTTTTTTTTAATTTGTGCAATCATTTTCCTGTTTTATCTTTTTGTAGTGTTCGGTCAATAGTCACTCTTAATCTCCCTAGCTATGGCGGTGGAAGGAATCCATGGGGACGTTTGAAGCCAGAGTACTTGGAGAAGGTATTCTTTTGTGTTAGCTGTGTAGGACTTCAGTGTATAAATTAATGATTACTTCCTGAATTCTACAAAGTAAATTAGTCATTTCTGAAACCAACGATAAACTAGGGTTATTTAGTTGGAAATTGCTGAATAGTTTAAATAGAATGTATTAGCTGTTCTGCTTAGGCTGTCAGACAAATATCTTTGTACAAAATTTTCAGTTTGCAAAATTTCTAAATTTGGTCCATATTCAGAAAAAATGTTTTCAGCTTCTTGACAACTTAATGTTTTTAGTACAACACTTATTTTATAGTCTGTAATCAGAGAAAATGATTGAGCTTCTAGTCACTTCAAGTTTTAGGTTCTGCATATTGTGTGTTTCCTCTACTAGCAATACATGATTTGAGCAAAAAACCCAAAGTCTCGTGGTATTTTTTCCCAAAGTTCTTGCAACTTGTAATTTTTAAACCTTTCAAAGATTAATTGATGTGTTTGTGCAGTTTATCACATATTCTCAGTTTTCAAACTTTCTCAGTTCCTAGAATGTGGTCATAATAAACTTCAAGATAACGGTAGGAAGTTGCAGCCACTTCACATCATCAAAAGTAACAATGAGTTTGTTTTTTCCTATGAAATGTAGAGGGGTTTTGTGGAAGCTCATGCAGATGATGGTTGCATTGAAATTTTTGGCCTGAAACAAGGATGGCATGCCTCTATGGTTATGGTTGAGCTCATTTCTGCAAAACACATTGCCCAGGTATTTATCAAATCTGGTAAATAAGAATTAGTGCAGCTTAGAGGCAATAAATTTAGATGTGTACGTGTTAACCCTTATTATGTGTCCTCCCTATTACATTTTGATCATGATAATCATTACATGCATTGCCTCATAAATTTTCCAACGAAAAAAACAAAGCGAGGAAGGGTTATATCTACTATCACTGGAAATTCCTGTTGCTGTACTAACTCCAGCTAAGTTTCTCCATCGTCTGTCTAAGGTAAGGCCCTTGCATCACGCAAGGATATCTACATACACCTGATAATGGTCATTCGGGCATCTGTATGAGGCTCTCGTTTTTATTAGGGTTGATAAACCAGTTGTCCTCATTTTGGACAATAAATTGTTAATACATCCTAACGCGAGTCCCTCCCAAAGAGATAATAGAGTTGAAAGAGAGGGGATATGGTAAATTGAGAGAGCATATCTGGTTCTATATTATATGAACTTGGAGGAAGTACATTCACTAGAACACATCCAAAACAGATGGTAATTACTTACGTCTCATTGAATTAAGCAAAAACTATTTTAGAACCAAAACCTTTTCTGGACAAGATAAACTCTTACTTGGCCATCTCATTTATCTGAATTTCAACGCTGTTTAAACAGTTGGCTTTCTGTAAAAATCGATAGGTAACATGTGTGGATTTGTTGTCTCTCTCTCTCTTGCAGAATGTCATATGAGTTTCTCATCGTTTTGTTGGGATCACATTTGTTCTTGATGAGATTGTTCTAGTTATTCCTAGGTGGAAATTTGTTCTTAATGAACACTTGTTTTGCTACTTTGTAGGCTTCAGCAATTCGATTTGAGTTGCGTGCAGGAGAGTGGGATGAAGCTTATATGCAGATGGACGGTGAACCATGGAAACAACCAATTAGCAAGGAATATTCAACCTTCATTGAAATTAAGAGAGTACCATTTCAGTCTCTCATGGTTAACGGCAAGAGAAATTGATCTT</genome_strand>
        <mrna_strand>CTTGATCAGGAATTGAAAATTGATGGTGAGTTGCCCAAGAAGTTGTCCAACTATCAAGGAGTATACTACAATTACTTTAGCATAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATGGATGCACAGGTAGCATATGGCTTCCATCATTTACGGAATGAAAAACCATACCTTGCACAAGGTCCCATATCAAACAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATTTACTCAGGATATAGTTGCACGCAAGGCTGGTTCTTTACACCATGTAGCAGTGACCCTTGTTTGAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGATTGAATAATATTTTGCGACTGTATGTTAAGAAGGTCAACAGCTCAAAGTGGGAGCAAATCTCTGTTCCTTCAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCCGGTCAATAGTCACTCTGAATCTCCCTAGCTATGGAGGTGGAAGGAATCCATGGGGACGTTTGAAGCCAGAGTACTTGGAGAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGGGTTTTGTGGATGCCCATGCAGATGATGGTTGCATTGAAATTTTTGGCCTGAAACAAGGATGGCATGCCTCTATGGTTATGGTTGAGCTCATTTCTGCAAAACACATTGCCCAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTCAGCAATTAGATTTGAGTTGCGTGCAGGAGAGTGGGATGAAGCTTATATGCAGATGGACGGTGAGCCATGGAAACAACCAATTAGCAAGGAATATTCAACCTTCATTGAAATTAAGAGAGTACCATTTCAGTCTCTCATGGTTAACGGGAAAAGAAATTGATCGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E293599" ref_strand="+" ref_description="SGN-E293599 [cLET-15-B20]">
      <seq>gcacaggtagcttatggcttccatcatttacggaatgaaaaaccataccttgcacaaggtcccatatcaaacaagttgatttactcaggatatagttgcacgcaaggctggttctttacaccatgtagcagtgacccttgtttgaggggattgaataatattctgcgactgtatgttaagaaggtcaacagctcaaaatgggagaaaatctctgttccttcaagtgttcggtcaatagtcactcttaatctccctagctatggcggtggaaggaatccatggggacgtttgaagccagagtacttggagaagaggggttttgtggaagctcatgcagatgatggttgcattgaaatttttggcctgaaacaaggatggcatgcctctatggttatggttgagctcatttctgcaaaacacattgcccaggcttcagcaattcgatttgagttgcgtgcaggagagtgggatgaagcttatatgcagatggacggtgaaccatggaaacaaccaattagcaaggaatattcaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="+" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="87262" stop="92620"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="87562" g_stop="87636" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="75" r_length="75" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="87637" i_stop="88765" i_length="1129">
            <donor d_prob="0.919" d_score="1.00"/>
            <acceptor a_prob="0.140" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="88766" g_stop="88836" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="76" r_stop="146" r_length="71" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="88837" i_stop="89343" i_length="507">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="89344" g_stop="89421" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="147" r_stop="224" r_length="78" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="89422" i_stop="90581" i_length="1160">
            <donor d_prob="0.949" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="90582" g_stop="90669" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="225" r_stop="312" r_length="88" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="90670" i_stop="91288" i_length="619">
            <donor d_prob="0.900" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="91289" g_stop="91405" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="313" r_stop="429" r_length="117" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="91406" i_stop="92216" i_length="811">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="92217" g_stop="92320" g_length="104"/>
          <reference_exon_boundary r_type="cDNA" r_start="430" r_stop="533" r_length="104" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="+" ref_id="SGN-E293599" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>533</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E293599" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="87562" e_stop="87636"/>
          <exon e_start="88766" e_stop="88836"/>
          <exon e_start="89344" e_stop="89421"/>
          <exon e_start="90582" e_stop="90669"/>
          <exon e_start="91289" e_stop="91405"/>
          <exon e_start="92217" e_stop="92320"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCACAGGTAGCTTATGGCTTCCATCATTTACGGAATGAAAAACCATACCTTGCACAAGGTCCCATATCAAACAAGGTTGATGCTTCTTGTTCCTTGATCGTTAAATTTTTTGAAGTACTTATTAAGGGATCTCTTGATCTTTCTTTTTTCTCTTCCTATCACTCAATTGATTTGAGAAAGTGTATATGCTTGTCAAATGAAGAAATGTGGGCAACAACACATATCATAAGGAAAGCATTGAAGACATTCTATTTTTTTTTTGTTAGAACTAACAACCTCATGTTGCCAAATGGCGCTGCTACATTTCTTTATTAAAGAACTGATTATATGCAAACCGGACTCTTATATTATCTTCACGAATCCTTGTTGAATAATTAAAATTGTGGTTGCATTGTTGCATATTTTTAGAGTGGGTTAGAGTCCCACATTAGTTGGTGATGGACTAGTGGTCTGCTTATATGGACTTGGGCTATCTTCCCTCATAAGCTAGTTGAGTAAGACCTATGTGCTCCATATATTTTCATGGTATCAGAGCCAAGTCTGTTTCCAGTTTGGGCTGTCGGTCCACACTCCACTTGGGCGTGAAGGGGAGGGGTGTGGGTGTTAGAGTGGGTTATAGAGTCTCACATCGGTTGAGGAATGGGGACTTGGGAAATTCTCCCTCATAAGCTAGATTTTGGGGTTAAGTTTGCCCAAATGCCACATCTTTTCACATATAAATCCTTCAAGATACACTTAAAACCTATTAAAAATGAGAAGAATCTGTTTTGGATCTCTAAGACCACTACTGGTTTCCTGTGCTTGGGTTACTTTTAATAGGAAGTTCAAACTTTTCGGCGTCTCTTAAAATAAGGAGCACGTGTATTTAAGTAACTTCTAAAACTTCCATAACAGTCTTGTTGTATGGCCCTGTTTCTATTCATGCAATCATGTGTCATGAACTTATTTGAGATATCTCTTTGCGTGGATAGTGATTGTTAGCTGTTTTACTGCTCCTTTAATGAAGTGTATTGCCATCCTAGGATGTATTTTAGTTACTTTCCCTTTGTGTTTGTTACTTTGAACCTACATATATATATATATATATATATATTTTTTTTTTTTTTTACATTTCATGTTTCTAGCTGATATTTTAACTTTACGAAAGTGCTACTTTAGTTTCTTCAGACATAAGTTCTAGTTATTGACAAAGCATTTATTACAGTTGATTTACTCAGGATATAGTTGCACGCAAGGCTGGTTCTTTACACCATGTAGCAGTGACCCTTGTTTGAGGTAAGAATGACTCCCTCAACACCCATTGATCCATGATGCCTTTTAATTCATCACACTCTGGTAGTTGCCACATGCTTTATCAAAAGATGTTTCGTATGTACCTTCTTATGTTAATTATGTCAGTGTTTCATCCTCTCTTGTCCAATATATCATATATTGCTTTCCAAAGCTAGTATGCGCAGTATGTATGCCCTTGTGTGCAGGACAGCGGATATTCTTAGGCTTGAAAATAAAAGGTGTGACTGATACTCTATGATTGTAGTATTAAATCAATTAACTTGAAAATTGTTTGCCATGTATTCACCTCTGTATACTGATAACTCAGCATTAGTCTGGCAGTATTTATCATCATGTATGGTTATGCATAATCTGTTGAAAGAATAATGTATAATTTATGTCCCCTCCTACTCCTTCCAACACATAAACTTGGATAAAGTTGTACCCAATCATGCTTTTCAACTCTGATATTTTTTTTTAAGATTGTGTGCTTGATTTTATTGATGGCAGGGGATTGAATAATATTCTGCGACTGTATGTTAAGAAGGTCAACAGCTCAAAATGGGAGAAAATCTCTGTTCCTTCAAGGTTGATTTTTGTCCTGGAATATTTATTTGAGTGTTGTAATTTATGTTTGTCATGTAATGCAGAATCTCTTGGATAACTAACAATTATATGTGTTTCGTTGTTCTTGTTATTTGACAACTATATGAGTATCAACCTGCTAAGCCACAATATAAAATTTTGGGAAAGGGTGCTGGAGATGAGGATGAGTAGGGGTGTGTCTATCACGGAGAACAAATTTGTATTCATCCGGGCGTTTGACTACTGAAGTCATACATATCATTAGGAGATTGATGGATCAATATAGGGAGAAGAAGGACTTATATGAGAGTAGCTGAAATGATGTTGAGACAGAGTGTTGGCTGGTAAAAACTCGCATGTCCAAAAGATTAGAGTAGCTGAAATGATGTTGAGATGAATGTGTGGATATATGAAGAGAGATTGGATTAGGAACAAAGTTATCCGGGATAAAGTGGGAATGACTTCCGTAGTGGACAAGATGAGGGAGAAGAAACTGAGATTGTTTGGGCATGTGAAGAGAAGATACACATATGCTCTATTGAGGAGGTGTGAGAGGTTGGCTAGTGGTTATTAGAATAGGTAGAGGTAGGTCGAAGAAGTCAAGGAAGATGCGATTAGACAGAACATGAAATACCTGCAACTTGTTGAGGACATGAACCTTGATAGGAAGATATGAAAGTCGAGGATTAGAGTTGAAGGTTAATAGGAAGTCAATCATTGAATAGTTCCCTTCCCCGTATTGTTATTGTTACTATCTTACTAGCTTATTCGTCGATGTTAATGTTACATGGTATTTCATTTGCTTCAATTATGGTATTATTTGTTGTTATTTTTGTCATCTTTTTTATTGTTTTCAGCTTGACTTCCTTGCTACTGTATTTGCTTCACACTTGTCTCTTTAAAATGCTTTACTTGAGCCGAGGGTCCATTTGAAACAGTTTCTCTACCTTCACAAGGTAGGGCGAGACTACATGCACGCCACCCCCACCCTCCCCAAACCCTTCTTGTGATATTACACCGAGTATATTGTTTTGTTTTAGTTATTTGTCAAGTAGTCAATTATATTGTTCTGTAATATGAACTACAATGCTAATGCACCGGATGTTACATGTTTTTTTTTTTTTTAATTTGTGCAATCATTTTCCTGTTTTATCTTTTTGTAGTGTTCGGTCAATAGTCACTCTTAATCTCCCTAGCTATGGCGGTGGAAGGAATCCATGGGGACGTTTGAAGCCAGAGTACTTGGAGAAGGTATTCTTTTGTGTTAGCTGTGTAGGACTTCAGTGTATAAATTAATGATTACTTCCTGAATTCTACAAAGTAAATTAGTCATTTCTGAAACCAACGATAAACTAGGGTTATTTAGTTGGAAATTGCTGAATAGTTTAAATAGAATGTATTAGCTGTTCTGCTTAGGCTGTCAGACAAATATCTTTGTACAAAATTTTCAGTTTGCAAAATTTCTAAATTTGGTCCATATTCAGAAAAAATGTTTTCAGCTTCTTGACAACTTAATGTTTTTAGTACAACACTTATTTTATAGTCTGTAATCAGAGAAAATGATTGAGCTTCTAGTCACTTCAAGTTTTAGGTTCTGCATATTGTGTGTTTCCTCTACTAGCAATACATGATTTGAGCAAAAAACCCAAAGTCTCGTGGTATTTTTTCCCAAAGTTCTTGCAACTTGTAATTTTTAAACCTTTCAAAGATTAATTGATGTGTTTGTGCAGTTTATCACATATTCTCAGTTTTCAAACTTTCTCAGTTCCTAGAATGTGGTCATAATAAACTTCAAGATAACGGTAGGAAGTTGCAGCCACTTCACATCATCAAAAGTAACAATGAGTTTGTTTTTTCCTATGAAATGTAGAGGGGTTTTGTGGAAGCTCATGCAGATGATGGTTGCATTGAAATTTTTGGCCTGAAACAAGGATGGCATGCCTCTATGGTTATGGTTGAGCTCATTTCTGCAAAACACATTGCCCAGGTATTTATCAAATCTGGTAAATAAGAATTAGTGCAGCTTAGAGGCAATAAATTTAGATGTGTACGTGTTAACCCTTATTATGTGTCCTCCCTATTACATTTTGATCATGATAATCATTACATGCATTGCCTCATAAATTTTCCAACGAAAAAAACAAAGCGAGGAAGGGTTATATCTACTATCACTGGAAATTCCTGTTGCTGTACTAACTCCAGCTAAGTTTCTCCATCGTCTGTCTAAGGTAAGGCCCTTGCATCACGCAAGGATATCTACATACACCTGATAATGGTCATTCGGGCATCTGTATGAGGCTCTCGTTTTTATTAGGGTTGATAAACCAGTTGTCCTCATTTTGGACAATAAATTGTTAATACATCCTAACGCGAGTCCCTCCCAAAGAGATAATAGAGTTGAAAGAGAGGGGATATGGTAAATTGAGAGAGCATATCTGGTTCTATATTATATGAACTTGGAGGAAGTACATTCACTAGAACACATCCAAAACAGATGGTAATTACTTACGTCTCATTGAATTAAGCAAAAACTATTTTAGAACCAAAACCTTTTCTGGACAAGATAAACTCTTACTTGGCCATCTCATTTATCTGAATTTCAACGCTGTTTAAACAGTTGGCTTTCTGTAAAAATCGATAGGTAACATGTGTGGATTTGTTGTCTCTCTCTCTCTTGCAGAATGTCATATGAGTTTCTCATCGTTTTGTTGGGATCACATTTGTTCTTGATGAGATTGTTCTAGTTATTCCTAGGTGGAAATTTGTTCTTAATGAACACTTGTTTTGCTACTTTGTAGGCTTCAGCAATTCGATTTGAGTTGCGTGCAGGAGAGTGGGATGAAGCTTATATGCAGATGGACGGTGAACCATGGAAACAACCAATTAGCAAGGAATATTCAAC</genome_strand>
        <mrna_strand>GCACAGGTAGCTTATGGCTTCCATCATTTACGGAATGAAAAACCATACCTTGCACAAGGTCCCATATCAAACAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATTTACTCAGGATATAGTTGCACGCAAGGCTGGTTCTTTACACCATGTAGCAGTGACCCTTGTTTGAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGATTGAATAATATTCTGCGACTGTATGTTAAGAAGGTCAACAGCTCAAAATGGGAGAAAATCTCTGTTCCTTCAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTCGGTCAATAGTCACTCTTAATCTCCCTAGCTATGGCGGTGGAAGGAATCCATGGGGACGTTTGAAGCCAGAGTACTTGGAGAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGGGTTTTGTGGAAGCTCATGCAGATGATGGTTGCATTGAAATTTTTGGCCTGAAACAAGGATGGCATGCCTCTATGGTTATGGTTGAGCTCATTTCTGCAAAACACATTGCCCAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTCAGCAATTCGATTTGAGTTGCGTGCAGGAGAGTGGGATGAAGCTTATATGCAGATGGACGGTGAACCATGGAAACAACCAATTAGCAAGGAATATTCAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E689452" ref_strand="+" ref_description="SGN-E689452 [t3_tus_84_N20]">
      <seq>ttgtaagaatgcaggccaaatcctccttttatgttctcatcctcctcagaaggtttgattaccaacgctaattttaagaatccatatggttcgttccgttttcaaatcgtttctaaatcttcctaaatctatctccatattaacaccttctgtttatcgcccaaattcgatctccatctctagctcatactcaactccaagaattagcaagagaattggctcattcttttctgcacccgttggtgagcaatttcaagaatttgggtcgttattttcagctaaatacagcacaaatggctatcttctccctcccaacttcataaatgtggttggttgtttatatggaatcggtgatatggaaagcttgtgcgaaccgggaaaaaagggaaactctacattgttacaaattaggtcataaataatgggtagcagaagtgcaatttctgggagtggtagatcacccaaatcttgacaaacttggaaattgtgatgttggcttatttgcatgaagaattggaagttcaggtattttatctgaatattttttgatgtatttgtctaaacttttcataaatatatattgcaagtgtgtgaactcttagttggatttctattttcttcaatgtataacccaattgtggcgtattgcttgatgttgaaggtatataatcattgatatggcttcacctttgtggcctaaaaatgttaaagcagagtttttctaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="+" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="92838" stop="95331"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="93138" g_stop="93460" g_length="323"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="323" r_length="323" r_score="0.994"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="93461" i_stop="93736" i_length="276">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.723" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="93737" g_stop="93823" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="324" r_stop="410" r_length="87" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="93824" i_stop="94715" i_length="892">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="94716" g_stop="95036" g_length="321"/>
          <reference_exon_boundary r_type="cDNA" r_start="411" r_stop="731" r_length="321" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="+" ref_id="SGN-E689452" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>731</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E689452" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="93138" e_stop="93460"/>
          <exon e_start="93737" e_stop="93823"/>
          <exon e_start="94716" e_stop="95036"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTTAAGAATGCAGGCCAAATCCTCCTTTTATGTTCTCATCCTCCTCAGAAGGTTTGATTACCAACGCTAATTTTAAGAATCCATATGGTTCGTTCCGTTTTCAAATCGTTTCTAAATCTTCCTAAATCTATCTCCATATTAACACCTTCTGTTTATCGCCCAAATTCGATCTCCATCTCTAGCTCATACTCAACTCCAAGAATTAGCAAGAGAATTGGCTCATTCTTTTCTGCACCCGTTGGTGAGCAATTTCAAGAATTTGGGTCGTTATTTTCAGCTAAATACAGCACAAATGGCTATCTTCTCCCTCCCAACTTCATAAGTAAGTAGCCAATCTTCTCCTTCCCAACTTCATAAGTTTCATAAGGTATGTATTATGTTTTGATGTAAGGTTTCTGTTTTGATCTTCATGATTTGTAATTGTCATGTTTTTAATTTGTATTAATCTTAATTGATTTTTGTGGCCTTTCATATCCTAATTCTTCTTATATATATAAAATAATAGTGTTTTATCAAGTCGATATTTATATATAGTGTGTTTCACGAAAAATTTTAATTGACTACCTCATTTTTAGCAAAACGTCTTCCTCATCTGTAGATGTGGTTGGTTGTTTATATGGAATCGGTGATATGGAAAGCTTGTGCGAACCGGGAAAAAAGGGAAACTCTACATTGTTACAAATTAGTAAGTCACTCATCTTATTTTAATTAGTTTGATTATGTCATCTTCTTACAAAATAATTGTTAGATACTTTTATGATAGTTAATCTTAGGTGCTACTAAATGGGAATTCATTAGAAATTATTTTGCTTACATATTTTAACCATCTAATTGATCTTTAACATACATAAGAAGGTGCGTAATTGACCCTGAATACTTTGACATTGAGGTGTATATAAGATTTGGATGGGTCTGTGTTTGATTTTAAAATAGGGCTATTAAAATAAGAGTTCTTCAATCTGGTAAGAAGGAAAAGAGAAAAATGATATTGGAGCTAATCTAAATGACTGTGGCTGCATTTCTTTGGACTGTACGAATGAACAAGTGTGATAAAATTGCAGGGGAGACATTGCTTTGGACTGATAAAACATGGTTCAAGCTATATTCCAATATCTTTGACACACACACACCTTTTTTGTTCCATTTGCATGTATGTTTGCTCATTGCACTTTGCTGTAAATACTATTTCCAACTCACTTTTTGTTATGTTAGTTTCCGCTTGATCATTTAATTGCCGCTCAAATGTGGATCCTTTCAGTATGGCTAGCAGTTTGTACAAACTTGATTTGATTATATGAGAAGCTCCCCTTTCAAGTAAAAATTTGTTAAACAGAAAATAAATGTCCGTAAAGTGTAACGAGCACCATGAAAACATTGGCAATATTTGTACTTTCTTCCATTCGTTGGAAGTTGTGGATTTCGGCATTACTTGGCAACAAGTTATGGTTGATGTGACTTGCTTTTCTAGATTTTGCGAACTTAAATCTGTACTCTTCTATTTTGGAAGCTAAATTACTTAAGTTTTTTTATCTTATTGAAAACTGTAGTTTTGTGTTGATCCTCTAATTGTTATGTAGGGTCATAAATAATGGGTAGCAGAAGTGCAATTTCTGGGAGTGGTAGATCACCCAAATCTTGACAAACTTGGAAATTGTGATGTTGGCTTATTTGCATGAAGAATTGGAAGTTCAGGTATTTTATCTGAATATTTTTTGATGTATTTGTCTAAACTTTTCATAAATATATATTGCAAGTGTGTGAACTCTTAGTTGGATTTCTATTTTCTTCAATGTATAACCCAATTGTGGCGTATTGCTTGATGTTGAAGGTATATAATCATTGATATGGCTTCACCTTTGTGGCCTAAAAATGTTAAAGCAGAGTTTTTCTATATGTTT</genome_strand>
        <mrna_strand>TTGTAAGAATGCAGGCCAAATCCTCCTTTTATGTTCTCATCCTCCTCAGAAGGTTTGATTACCAACGCTAATTTTAAGAATCCATATGGTTCGTTCCGTTTTCAAATCGTTTCTAAATCTTCCTAAATCTATCTCCATATTAACACCTTCTGTTTATCGCCCAAATTCGATCTCCATCTCTAGCTCATACTCAACTCCAAGAATTAGCAAGAGAATTGGCTCATTCTTTTCTGCACCCGTTGGTGAGCAATTTCAAGAATTTGGGTCGTTATTTTCAGCTAAATACAGCACAAATGGCTATCTTCTCCCTCCCAACTTCATAA....................................................................................................................................................................................................................................................................................ATGTGGTTGGTTGTTTATATGGAATCGGTGATATGGAAAGCTTGTGCGAACCGGGAAAAAAGGGAAACTCTACATTGTTACAAATTA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTCATAAATAATGGGTAGCAGAAGTGCAATTTCTGGGAGTGGTAGATCACCCAAATCTTGACAAACTTGGAAATTGTGATGTTGGCTTATTTGCATGAAGAATTGGAAGTTCAGGTATTTTATCTGAATATTTTTTGATGTATTTGTCTAAACTTTTCATAAATATATATTGCAAGTGTGTGAACTCTTAGTTGGATTTCTATTTTCTTCAATGTATAACCCAATTGTGGCGTATTGCTTGATGTTGAAGGTATATAATCATTGATATGGCTTCACCTTTGTGGCCTAAAAATGTTAAAGCAGAGTTTTTCTAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E333582" ref_strand="+" ref_description="SGN-E333582 [cTOD-22-I22]">
      <seq>aagaatgcaggccaaatcctccttttatgttctcatcctcctcagaaggtttgattaccaacgctaattttaagaatccatatggttcgttccgttttcaaatcgtttctaaatcttcctaaatctatctccatattaacaccttctgtttatcgcccaaattcgatctccatctctagctcatactcaactccaagaattagcaagagaattggctcattcttttctgcacccgttggtgagcaatttcaagaatttgggtcgttattttcagctaaatacagcacaaatggctatcttctccctcccaacttcataaatgtggttggttgtttatatggaatcggtgatatggaaagcttgtgcgaaccgggaaaaaagggaaactctacattgttacaaattaggtcataaataatgggtagcagaagtgcaatttctgggagtggtagatcacccaaatcttgacaaacttggaaattgtgatgttggcttatttgcatgaagaattggaagttcaggtattttatctgaatattttttgatgtatttgtctaaacttttcataaatatatattgcaagtgtgtgaactcttagttggatttctattttcttcaatgtataacccaattgtggcgtattgcttgatgttgaaggtatataatcattgatatggcttcacctttgtggcctaaaatgttaaagcagagtttttctaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="+" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="92842" stop="95331"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="93142" g_stop="93460" g_length="319"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="319" r_length="319" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="93461" i_stop="93736" i_length="276">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.723" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="93737" g_stop="93823" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="320" r_stop="406" r_length="87" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="93824" i_stop="94715" i_length="892">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="94716" g_stop="95035" g_length="320"/>
          <reference_exon_boundary r_type="cDNA" r_start="407" r_stop="725" r_length="319" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="+" ref_id="SGN-E333582" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>726</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E333582" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="93142" e_stop="93460"/>
          <exon e_start="93737" e_stop="93823"/>
          <exon e_start="94716" e_stop="95035"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGAATGCAGGCCAAATCCTCCTTTTATGTTCTCATCCTCCTCAGAAGGTTTGATTACCAACGCTAATTTTAAGAATCCATATGGTTCGTTCCGTTTTCAAATCGTTTCTAAATCTTCCTAAATCTATCTCCATATTAACACCTTCTGTTTATCGCCCAAATTCGATCTCCATCTCTAGCTCATACTCAACTCCAAGAATTAGCAAGAGAATTGGCTCATTCTTTTCTGCACCCGTTGGTGAGCAATTTCAAGAATTTGGGTCGTTATTTTCAGCTAAATACAGCACAAATGGCTATCTTCTCCCTCCCAACTTCATAAGTAAGTAGCCAATCTTCTCCTTCCCAACTTCATAAGTTTCATAAGGTATGTATTATGTTTTGATGTAAGGTTTCTGTTTTGATCTTCATGATTTGTAATTGTCATGTTTTTAATTTGTATTAATCTTAATTGATTTTTGTGGCCTTTCATATCCTAATTCTTCTTATATATATAAAATAATAGTGTTTTATCAAGTCGATATTTATATATAGTGTGTTTCACGAAAAATTTTAATTGACTACCTCATTTTTAGCAAAACGTCTTCCTCATCTGTAGATGTGGTTGGTTGTTTATATGGAATCGGTGATATGGAAAGCTTGTGCGAACCGGGAAAAAAGGGAAACTCTACATTGTTACAAATTAGTAAGTCACTCATCTTATTTTAATTAGTTTGATTATGTCATCTTCTTACAAAATAATTGTTAGATACTTTTATGATAGTTAATCTTAGGTGCTACTAAATGGGAATTCATTAGAAATTATTTTGCTTACATATTTTAACCATCTAATTGATCTTTAACATACATAAGAAGGTGCGTAATTGACCCTGAATACTTTGACATTGAGGTGTATATAAGATTTGGATGGGTCTGTGTTTGATTTTAAAATAGGGCTATTAAAATAAGAGTTCTTCAATCTGGTAAGAAGGAAAAGAGAAAAATGATATTGGAGCTAATCTAAATGACTGTGGCTGCATTTCTTTGGACTGTACGAATGAACAAGTGTGATAAAATTGCAGGGGAGACATTGCTTTGGACTGATAAAACATGGTTCAAGCTATATTCCAATATCTTTGACACACACACACCTTTTTTGTTCCATTTGCATGTATGTTTGCTCATTGCACTTTGCTGTAAATACTATTTCCAACTCACTTTTTGTTATGTTAGTTTCCGCTTGATCATTTAATTGCCGCTCAAATGTGGATCCTTTCAGTATGGCTAGCAGTTTGTACAAACTTGATTTGATTATATGAGAAGCTCCCCTTTCAAGTAAAAATTTGTTAAACAGAAAATAAATGTCCGTAAAGTGTAACGAGCACCATGAAAACATTGGCAATATTTGTACTTTCTTCCATTCGTTGGAAGTTGTGGATTTCGGCATTACTTGGCAACAAGTTATGGTTGATGTGACTTGCTTTTCTAGATTTTGCGAACTTAAATCTGTACTCTTCTATTTTGGAAGCTAAATTACTTAAGTTTTTTTATCTTATTGAAAACTGTAGTTTTGTGTTGATCCTCTAATTGTTATGTAGGGTCATAAATAATGGGTAGCAGAAGTGCAATTTCTGGGAGTGGTAGATCACCCAAATCTTGACAAACTTGGAAATTGTGATGTTGGCTTATTTGCATGAAGAATTGGAAGTTCAGGTATTTTATCTGAATATTTTTTGATGTATTTGTCTAAACTTTTCATAAATATATATTGCAAGTGTGTGAACTCTTAGTTGGATTTCTATTTTCTTCAATGTATAACCCAATTGTGGCGTATTGCTTGATGTTGAAGGTATATAATCATTGATATGGCTTCACCTTTGTGGCCTAAAAATGTTAAAGCAGAGTTTTTCTATATGTT</genome_strand>
        <mrna_strand>AAGAATGCAGGCCAAATCCTCCTTTTATGTTCTCATCCTCCTCAGAAGGTTTGATTACCAACGCTAATTTTAAGAATCCATATGGTTCGTTCCGTTTTCAAATCGTTTCTAAATCTTCCTAAATCTATCTCCATATTAACACCTTCTGTTTATCGCCCAAATTCGATCTCCATCTCTAGCTCATACTCAACTCCAAGAATTAGCAAGAGAATTGGCTCATTCTTTTCTGCACCCGTTGGTGAGCAATTTCAAGAATTTGGGTCGTTATTTTCAGCTAAATACAGCACAAATGGCTATCTTCTCCCTCCCAACTTCATAA....................................................................................................................................................................................................................................................................................ATGTGGTTGGTTGTTTATATGGAATCGGTGATATGGAAAGCTTGTGCGAACCGGGAAAAAAGGGAAACTCTACATTGTTACAAATTA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTCATAAATAATGGGTAGCAGAAGTGCAATTTCTGGGAGTGGTAGATCACCCAAATCTTGACAAACTTGGAAATTGTGATGTTGGCTTATTTGCATGAAGAATTGGAAGTTCAGGTATTTTATCTGAATATTTTTTGATGTATTTGTCTAAACTTTTCATAAATATATATTGCAAGTGTGTGAACTCTTAGTTGGATTTCTATTTTCTTCAATGTATAACCCAATTGTGGCGTATTGCTTGATGTTGAAGGTATATAATCATTGATATGGCTTCACCTTTGTGGCCT-AAAATGTTAAAGCAGAGTTTTTCTAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E298197" ref_strand="+" ref_description="SGN-E298197 [cLEW-9-K21]">
      <seq>tcaactccaagaattagcaagagaattggctcattcttttctgcacccgttggtgagcaatttcaagaatttgggtcgttattttcagctaaatacagcacaaatggctatcttctccctcccaacttcataagtaagtagccaatcttctccttcccaacttcataagtttcataaggtatgtattatgttttgatgtaaggtttctgttttgatcttcatgatttgtaattgtcatgtttttaatttgtattaatcttaattgatttttgtggcctttcatatcctaattcttcttatatatataaaataatagtgttttatcaagtcgatatttatatatagtgtgtttcacgaaaaattttaattgactacctcatttttagcaaaacgtctttctcatctgtagatgtggatggttgtttatatggaatcggtgatatggaaagcttgtgcgaaccgggaaaaaagggaaactctacattgttacaaatta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="+" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="93028" stop="94123"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="93328" g_stop="93823" g_length="496"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="496" r_length="496" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="+" ref_id="SGN-E298197" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>496</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E298197" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="93328" e_stop="93823"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAACTCCAAGAATTAGCAAGAGAATTGGCTCATTCTTTTCTGCACCCGTTGGTGAGCAATTTCAAGAATTTGGGTCGTTATTTTCAGCTAAATACAGCACAAATGGCTATCTTCTCCCTCCCAACTTCATAAGTAAGTAGCCAATCTTCTCCTTCCCAACTTCATAAGTTTCATAAGGTATGTATTATGTTTTGATGTAAGGTTTCTGTTTTGATCTTCATGATTTGTAATTGTCATGTTTTTAATTTGTATTAATCTTAATTGATTTTTGTGGCCTTTCATATCCTAATTCTTCTTATATATATAAAATAATAGTGTTTTATCAAGTCGATATTTATATATAGTGTGTTTCACGAAAAATTTTAATTGACTACCTCATTTTTAGCAAAACGTCTTCCTCATCTGTAGATGTGGTTGGTTGTTTATATGGAATCGGTGATATGGAAAGCTTGTGCGAACCGGGAAAAAAGGGAAACTCTACATTGTTACAAATTA</genome_strand>
        <mrna_strand>TCAACTCCAAGAATTAGCAAGAGAATTGGCTCATTCTTTTCTGCACCCGTTGGTGAGCAATTTCAAGAATTTGGGTCGTTATTTTCAGCTAAATACAGCACAAATGGCTATCTTCTCCCTCCCAACTTCATAAGTAAGTAGCCAATCTTCTCCTTCCCAACTTCATAAGTTTCATAAGGTATGTATTATGTTTTGATGTAAGGTTTCTGTTTTGATCTTCATGATTTGTAATTGTCATGTTTTTAATTTGTATTAATCTTAATTGATTTTTGTGGCCTTTCATATCCTAATTCTTCTTATATATATAAAATAATAGTGTTTTATCAAGTCGATATTTATATATAGTGTGTTTCACGAAAAATTTTAATTGACTACCTCATTTTTAGCAAAACGTCTTTCTCATCTGTAGATGTGGATGGTTGTTTATATGGAATCGGTGATATGGAAAGCTTGTGCGAACCGGGAAAAAAGGGAAACTCTACATTGTTACAAATTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E379839" ref_strand="+" ref_description="SGN-E379839 [TUS-1-N10]">
      <seq>agacacacacaatgcataataacaatagtctatgaagtgagttgagaaccatgagttctcacgctcaagaagctgcaaattaagttagaacattgtcttgctatcttcataatcaagttatcataacgtccattcatacacatatatatgcgcgaaaaatagtgatgaacctaatatttgttccctcataaaaccatctcttactgtattgtactctgaacaaaaaagtattctatgaaattcagtacaacgaaagtactctaggaaattagtaatttacaagatgtatgtaagtcctaataaaaaaaatgtacaaagcatatcatactgtgttaacttcaatcccaacaactgattcagaatctgctgcatacgtgtagctctgattattaatatggatggggaggaataacacagatacgattaacggattaagaacagaacctgctactctaaattttagattcgtcactgattcaacacgcatatatatatataccaagagtgctccaataaagacaagtcacaagtctgttttgcttccaaggcagcttatttaaatcgaaagagactacaaaatttcttccattactaatctcttcctaaatctaataagattctgtggaatagtattctcaacaaacattcaccctcttccaaaagttatattctagatagtgtgcaaggaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="+" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="95459" stop="96746"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="95759" g_stop="96446" g_length="688"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="689" r_length="689" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="+" ref_id="SGN-E379839" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>688</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E379839" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="95759" e_stop="96446"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGACACACACAATGCATAATAACAATAGTCTATGAAGTGAGTTGAGAACCATGAGTTCTCACGCTCAAGAAGCTGCAAATTAAGTTAGAACATTGTCTTGCTATCTTCATAATCAAGTTATCATAACGTCCATTCATACACATATATATGCGCGAAAAATAGTGATGAACCTAATATTTGTTCCCTCATAAAACCATCTCTTACTGTATTGTACTCTGAACAAAAAAGTATTCTATGAAATTCAGTACAAC-AAAGTACTCTAGGAAATTAGTAATTTACAAGATGTATGTAAGTCCTAATAAAAAAAATGTACAAAGCATATCATACTGTGTTAACTTCAATCCCAACAACTGATTCAGAATCTGCTGCATACGTGTAGCTCTGATTATTAATATGGATGGGGAGGAATAACACAGATACGATTAACGGATTAAGAACAGAACCTGCTACTCTAAATTTTAGATTCGTCACTGATTCAACACGCATATATATATATACCAAGAGTGCTCCAATAAAGACAAGTCACAAGTCTGTTTTGCTTCCAAGGCAGCTTATTTAAATCGAAAGAGACTACAAAATTTCTTCCATTACTAATCTCTTCCTAAATCTAATAAGATTCTGTGGAATAGTATTCTCAACAAACATTCACCCTCTTCCAAAAGTTATATTCTAGATAGTGTGCAAGGAA</genome_strand>
        <mrna_strand>AGACACACACAATGCATAATAACAATAGTCTATGAAGTGAGTTGAGAACCATGAGTTCTCACGCTCAAGAAGCTGCAAATTAAGTTAGAACATTGTCTTGCTATCTTCATAATCAAGTTATCATAACGTCCATTCATACACATATATATGCGCGAAAAATAGTGATGAACCTAATATTTGTTCCCTCATAAAACCATCTCTTACTGTATTGTACTCTGAACAAAAAAGTATTCTATGAAATTCAGTACAACGAAAGTACTCTAGGAAATTAGTAATTTACAAGATGTATGTAAGTCCTAATAAAAAAAATGTACAAAGCATATCATACTGTGTTAACTTCAATCCCAACAACTGATTCAGAATCTGCTGCATACGTGTAGCTCTGATTATTAATATGGATGGGGAGGAATAACACAGATACGATTAACGGATTAAGAACAGAACCTGCTACTCTAAATTTTAGATTCGTCACTGATTCAACACGCATATATATATATACCAAGAGTGCTCCAATAAAGACAAGTCACAAGTCTGTTTTGCTTCCAAGGCAGCTTATTTAAATCGAAAGAGACTACAAAATTTCTTCCATTACTAATCTCTTCCTAAATCTAATAAGATTCTGTGGAATAGTATTCTCAACAAACATTCACCCTCTTCCAAAAGTTATATTCTAGATAGTGTGCAAGGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E375333" ref_strand="+" ref_description="SGN-E375333 [TUS-15-J10]">
      <seq>agacacacacaatgcataataacaatagtctatgaagtgagttgagaaccatgagttctcacgctcaagaagctgcaaattaagttagaacattgtcttgctatcttcataatcaagttatcataacgtccattcatacacatatatatgcgcgaaaaatagtgatgaacctaatatttgttccctcataaaaccatctcttactgtattgtactctgaacaaaaaagtattctatgaaattcagtacaacaaagtactctaggaaattagtaatttacaagatgtatgtaagtcctaataaaaaaaatgtacaaagcatatcatactgtgttaacttcaatcccaacaactgattcagaatctgctgcatacgtgtagctctgattattaatatggatggggaggaataacacagatacgattaacggattaagaacagaacctgctactctaaattttagattcgtcactgattcaacacgcatatatatatataccaagagtgctccaataaagacaagtcacaagtctggtttgctttcaaggcagcttattttaaatcgaaagagacctacaaaatttcttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="+" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="95459" stop="96643"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="95759" g_stop="96343" g_length="585"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="587" r_length="587" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="+" ref_id="SGN-E375333" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>585</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E375333" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="95759" e_stop="96343"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGACACACACAATGCATAATAACAATAGTCTATGAAGTGAGTTGAGAACCATGAGTTCTCACGCTCAAGAAGCTGCAAATTAAGTTAGAACATTGTCTTGCTATCTTCATAATCAAGTTATCATAACGTCCATTCATACACATATATATGCGCGAAAAATAGTGATGAACCTAATATTTGTTCCCTCATAAAACCATCTCTTACTGTATTGTACTCTGAACAAAAAAGTATTCTATGAAATTCAGTACAACAAAGTACTCTAGGAAATTAGTAATTTACAAGATGTATGTAAGTCCTAATAAAAAAAATGTACAAAGCATATCATACTGTGTTAACTTCAATCCCAACAACTGATTCAGAATCTGCTGCATACGTGTAGCTCTGATTATTAATATGGATGGGGAGGAATAACACAGATACGATTAACGGATTAAGAACAGAACCTGCTACTCTAAATTTTAGATTCGTCACTGATTCAACACGCATATATATATATACCAAGAGTGCTCCAATAAAGACAAGTCACAAGTCTGTTTTGCTTCCAAGGCAGCTTA-TTTAAATCGAAAGAGA-CTACAAAATTTCTTC</genome_strand>
        <mrna_strand>AGACACACACAATGCATAATAACAATAGTCTATGAAGTGAGTTGAGAACCATGAGTTCTCACGCTCAAGAAGCTGCAAATTAAGTTAGAACATTGTCTTGCTATCTTCATAATCAAGTTATCATAACGTCCATTCATACACATATATATGCGCGAAAAATAGTGATGAACCTAATATTTGTTCCCTCATAAAACCATCTCTTACTGTATTGTACTCTGAACAAAAAAGTATTCTATGAAATTCAGTACAACAAAGTACTCTAGGAAATTAGTAATTTACAAGATGTATGTAAGTCCTAATAAAAAAAATGTACAAAGCATATCATACTGTGTTAACTTCAATCCCAACAACTGATTCAGAATCTGCTGCATACGTGTAGCTCTGATTATTAATATGGATGGGGAGGAATAACACAGATACGATTAACGGATTAAGAACAGAACCTGCTACTCTAAATTTTAGATTCGTCACTGATTCAACACGCATATATATATATACCAAGAGTGCTCCAATAAAGACAAGTCACAAGTCTGGTTTGCTTTCAAGGCAGCTTATTTTAAATCGAAAGAGACCTACAAAATTTCTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E204726" ref_strand="+" ref_description="SGN-E204726 [cLEC-14-D18]">
      <seq>agacacacacaatgcataataacaatagtctatgaagtgagttgagaaccatgagttctcacgctcaagaagctgcaaattaagttagaacattgtcttgctatcttcataatcaagttatcataacgtccattcatacacatatatatgcgcgaaaaatagtgatgaacctaatatttgttccctcataaaaccatctcttactgtattgtactctgaacaaaaaagtattctatgaaattcagtacaacaaagtactctaggaaattagtaatttacaagatgtatgtaagtcctaataaaaaaaatgtacaaagcatatcatactgtgttaacttcaatcccaacaactgattcagaatctgctgcatacgtgtagctctgattattaatatggatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="+" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="95459" stop="96458"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="95759" g_stop="96158" g_length="400"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="400" r_length="400" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="+" ref_id="SGN-E204726" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>400</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E204726" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="95759" e_stop="96158"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGACACACACAATGCATAATAACAATAGTCTATGAAGTGAGTTGAGAACCATGAGTTCTCACGCTCAAGAAGCTGCAAATTAAGTTAGAACATTGTCTTGCTATCTTCATAATCAAGTTATCATAACGTCCATTCATACACATATATATGCGCGAAAAATAGTGATGAACCTAATATTTGTTCCCTCATAAAACCATCTCTTACTGTATTGTACTCTGAACAAAAAAGTATTCTATGAAATTCAGTACAACAAAGTACTCTAGGAAATTAGTAATTTACAAGATGTATGTAAGTCCTAATAAAAAAAATGTACAAAGCATATCATACTGTGTTAACTTCAATCCCAACAACTGATTCAGAATCTGCTGCATACGTGTAGCTCTGATTATTAATATGGATG</genome_strand>
        <mrna_strand>AGACACACACAATGCATAATAACAATAGTCTATGAAGTGAGTTGAGAACCATGAGTTCTCACGCTCAAGAAGCTGCAAATTAAGTTAGAACATTGTCTTGCTATCTTCATAATCAAGTTATCATAACGTCCATTCATACACATATATATGCGCGAAAAATAGTGATGAACCTAATATTTGTTCCCTCATAAAACCATCTCTTACTGTATTGTACTCTGAACAAAAAAGTATTCTATGAAATTCAGTACAACAAAGTACTCTAGGAAATTAGTAATTTACAAGATGTATGTAAGTCCTAATAAAAAAAATGTACAAAGCATATCATACTGTGTTAACTTCAATCCCAACAACTGATTCAGAATCTGCTGCATACGTGTAGCTCTGATTATTAATATGGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E250164" ref_strand="+" ref_description="SGN-E250164 [cLEG-11-M5]">
      <seq>ttatattctagatagtgtgcaaggaaagacaaatgggacgattgtaaaattacaaatcaaattattttgaggagtatcaaataataataataacgttgttctaataaatgctgcacctactgaaaagccataacagatttgatttttgttttttgttcaaatttggtttgggctaataacataatactggatcaatgacgctaaaagcctaaaaatagcttgtggttttcgaagtataggtaagggcaaaccaaataaaaataataatttgttcattttcttttttgcttctcttttgtagttttttgagattttttttcttattcttgtagtttctaccgacactgattgtctttattcactttgtaaatttgaagaatcaaattatgttatgttgagaacatgatcttcatgctaaaagtcttctttgaatgcctatatcctggcggttttggataatgttatgttgagatcgatgattataattcttttccttggaattgtattcatttggctttggctataattctttttccttgattaatgtgatgtcat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="+" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="96121" stop="97275"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="96421" g_stop="96975" g_length="555"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="555" r_length="555" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="+" ref_id="SGN-E250164" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>555</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E250164" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="96421" e_stop="96975"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTATATTCTAGATAGTGTGCAAGGAAAGACAAATGGGACGATTGTAAAATTACAAATCAAATTATTTTGAGGAGTATCAAATAATAATAATAACGTTGTTCTAATAAATGCTGCACCTACTGAAAAGCCATAACAGATTTGATTTTTGTTTTTTGTTCAAATTTGGTTTGGGCTAATAACATAATACTGGATCAATGACGCTAAAAGCCTAAAAATAGCTTGTGGTTTTCGAAGTATAGGTAAGGGCAAACCAAATAAAAATAATAATTTGTTCATTTTCTTTTTTGCTTCTCTTTTGTAGTTTTTTGAGATTTTTTTTCTTATTCTTGTAGTTTCTACCGACACTGATTGTCTTTATTCACTTTGTAAATTTGAAGAATCAAATTATGTTATGTTGAGAACATGATCTTCATGCTAAAAGTCTTCTTTGAATGCCTATATCCTGGCGGTTTTGGATAATGTTATGTTGAGATCGATGATTATAATTCTTTTCCTTGGAATTGTATTCATTTGGCTTTGGCTATAATTCTTTTTCCTTGATTAATGTGATGTCAT</genome_strand>
        <mrna_strand>TTATATTCTAGATAGTGTGCAAGGAAAGACAAATGGGACGATTGTAAAATTACAAATCAAATTATTTTGAGGAGTATCAAATAATAATAATAACGTTGTTCTAATAAATGCTGCACCTACTGAAAAGCCATAACAGATTTGATTTTTGTTTTTTGTTCAAATTTGGTTTGGGCTAATAACATAATACTGGATCAATGACGCTAAAAGCCTAAAAATAGCTTGTGGTTTTCGAAGTATAGGTAAGGGCAAACCAAATAAAAATAATAATTTGTTCATTTTCTTTTTTGCTTCTCTTTTGTAGTTTTTTGAGATTTTTTTTCTTATTCTTGTAGTTTCTACCGACACTGATTGTCTTTATTCACTTTGTAAATTTGAAGAATCAAATTATGTTATGTTGAGAACATGATCTTCATGCTAAAAGTCTTCTTTGAATGCCTATATCCTGGCGGTTTTGGATAATGTTATGTTGAGATCGATGATTATAATTCTTTTCCTTGGAATTGTATTCATTTGGCTTTGGCTATAATTCTTTTTCCTTGATTAATGTGATGTCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E244240" ref_strand="+" ref_description="SGN-E244240 [cLEF-37-I19]">
      <seq>gtttctaccgcactgattgtctttattcactttgcaatcgaagaatcaaattatgttatgttgagaacatgatcttcatgctaaaagtcttctttgaatgcctatatcctgcggttttggataatgttatgttgagatcgatgattataattcttttccttggaattgtattcatttggctttggctataattctttttccttgattaatgtgatgtcatgttctttaactaactgcttcctattctagctctctgctttactttctgacatagggattaatatccgagaagctcatgttttctcaacaattgatgggtactcattagatgtatttgtggtggatggatggcctgttgaggtatgctctgtgttgctcacccatttttagtaggtttgatgtacatattctagcatct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="+" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="96452" stop="97472"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="96752" g_stop="97172" g_length="421"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="418" r_length="418" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="+" ref_id="SGN-E244240" ref_strand="+">
        <total_alignment_score>0.981</total_alignment_score>
        <cumulative_length_of_scored_exons>421</cumulative_length_of_scored_exons>
        <coverage percentage="1.007" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E244240" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="96752" e_stop="97172"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTTCTACCGACACTGATTGTCTTTATTCACTTTGTAAATTTGAAGAATCAAATTATGTTATGTTGAGAACATGATCTTCATGCTAAAAGTCTTCTTTGAATGCCTATATCCTGGCGGTTTTGGATAATGTTATGTTGAGATCGATGATTATAATTCTTTTCCTTGGAATTGTATTCATTTGGCTTTGGCTATAATTCTTTTTCCTTGATTAATGTGATGTCATGTTCTTTAACTAACTGCTTCCTATTCTAGCTCTCTGCTTTACTTTCTGACATAGGGATTAATATCCGAGAAGCTCATGTTTTCTCAACAATTGATGGGTACTCATTAGATGTATTTGTGGTGGATGGATGGCCTGTTGAGGTATGCTCTGTGTTGCTCA-CCATTTTTAGTAGGTTTGATGTACATATTCTAGCATCT</genome_strand>
        <mrna_strand>GTTTCTACCG-CACTGATTGTCTTTATTCACTTTG-CAA-TCGAAGAATCAAATTATGTTATGTTGAGAACATGATCTTCATGCTAAAAGTCTTCTTTGAATGCCTATATCCT-GCGGTTTTGGATAATGTTATGTTGAGATCGATGATTATAATTCTTTTCCTTGGAATTGTATTCATTTGGCTTTGGCTATAATTCTTTTTCCTTGATTAATGTGATGTCATGTTCTTTAACTAACTGCTTCCTATTCTAGCTCTCTGCTTTACTTTCTGACATAGGGATTAATATCCGAGAAGCTCATGTTTTCTCAACAATTGATGGGTACTCATTAGATGTATTTGTGGTGGATGGATGGCCTGTTGAGGTATGCTCTGTGTTGCTCACCCATTTTTAGTAGGTTTGATGTACATATTCTAGCATCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E379115" ref_strand="+" ref_description="SGN-E379115 [TUS-1-N10](-)">
      <seq>tcattagatgtatttgtggtggatggatggcctgtgaggtatgcttctgtgttgctcaccatttttagtaggtttgatgtacatattctagcatcttgtttcatatcagtgtttctacattaccacttacttttgtgtgagttctctggtgggtcttcttaatttaatagatttcagtttcggggtttaaagaacgaatgatttagggattatatgattgtaatcttaatttagtctctcaacatgtttgcgcatcgcgcgatcctaacaactattttaaaaataatgaccctgaatactttgacattgaggtgtatatagggaaccaacggattgaccaaacagatggtaattacatttaatgttaaaattcaaataattttaaggattaacatgtttaataaatatgttgataaatttactttttgaagaacaatcaggtatctgttgatgtgttattgactgacttggaagattatgaggatgaagtacatgtaactaatggtgctaagagtagaaaacgaagaaacctaatcatagatgatgaggaattaagcattcaagacacaaataaggtcaagaagtaaagggataattgttggtcataaatgacgaggaataagtgttcatcacacaaataagttgaagatgtagagggataattgttgcttctgattgttttctgttttttgggcta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="+" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="96777" stop="98073"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="97077" g_stop="97773" g_length="697"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="697" r_length="697" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="+" ref_id="SGN-E379115" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>697</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E379115" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="97077" e_stop="97773"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCATTAGATGTATTTGTGGTGGATGGATGGCCTGTTGAGGTATGC-TCTGTGTTGCTCACCATTTTTAGTAGGTTTGATGTACATATTCTAGCATCTTGTTTCATATCAGTGTTTCTACATTACCACTTACTTTTGTGTGAGTTCTCTGGTGGGTCTTCTTAATTTAATAGATTTCAGTTTCGGGGTTTAAAGAACGAATGATTTAGGGATTATATGATTGTAATCTTAATTTAGTCTCTCAACATGTTTGCGCATCGCGCGATCCTAACAACTATTTTAAAAATAATGACCCTGAATACTTTGACATTGAGGTGTATATAGGGAACCAACGGATTGACCAAACAGATGGTAATTACATTTAATGTTAAAATTCAAATAATTTTAAGGATTAACATGTTTAATAAATATGTTGATAAATTTACTTTTTGAAGAACAATCAGGTATCTGTTGATGTGTTATTGACTGACTTGGAAGATTATGAGGATGAAGTACATGTAACTAATGGTGCTAAGAGTAGAAAACGAAGAAACCTAATCATAGATGATGAGGAATTAAGCATTCAAGACACAAATAAGGTCAAGAAGTAAAGGGATAATTGTTGGTCATAAATGACGAGGAATAAGTGTTCATCACACAAATAAGTTGAAGATGTAGAGGGATAATTGTTGCTTCTGATTGTTTTCTGTTTTTTGGGCTA</genome_strand>
        <mrna_strand>TCATTAGATGTATTTGTGGTGGATGGATGGCCTG-TGAGGTATGCTTCTGTGTTGCTCACCATTTTTAGTAGGTTTGATGTACATATTCTAGCATCTTGTTTCATATCAGTGTTTCTACATTACCACTTACTTTTGTGTGAGTTCTCTGGTGGGTCTTCTTAATTTAATAGATTTCAGTTTCGGGGTTTAAAGAACGAATGATTTAGGGATTATATGATTGTAATCTTAATTTAGTCTCTCAACATGTTTGCGCATCGCGCGATCCTAACAACTATTTTAAAAATAATGACCCTGAATACTTTGACATTGAGGTGTATATAGGGAACCAACGGATTGACCAAACAGATGGTAATTACATTTAATGTTAAAATTCAAATAATTTTAAGGATTAACATGTTTAATAAATATGTTGATAAATTTACTTTTTGAAGAACAATCAGGTATCTGTTGATGTGTTATTGACTGACTTGGAAGATTATGAGGATGAAGTACATGTAACTAATGGTGCTAAGAGTAGAAAACGAAGAAACCTAATCATAGATGATGAGGAATTAAGCATTCAAGACACAAATAAGGTCAAGAAGTAAAGGGATAATTGTTGGTCATAAATGACGAGGAATAAGTGTTCATCACACAAATAAGTTGAAGATGTAGAGGGATAATTGTTGCTTCTGATTGTTTTCTGTTTTTTGGGCTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E375332" ref_strand="+" ref_description="SGN-E375332 [TUS-15-J10](-)">
      <seq>gtttaaagaaacgaaatgatttagggattatatgattgtaaatcttaaatttagtctctcaacatgtttgcgcatcgcgcgatcctaaacaactattttaaaaataatgaccctgaatactttgacattgaggtgtatatagggaaccaacggattgaccaaacagatggtaattacatttaatgttaaaattcaaataattttaaggattaacatgtttaataaatatgttgataaatttactttttgaagaacaatcaggtatctgttgatgtgttattgactgacttggaagattatgaggatgaagtacatgtaactaatggtgctaagagtagaaaacgaagaaacctaatcatagatgatgaggaattaagcattcaagacacaaataaggtcaagaagtaaagggataattgttggtcataaatgacgaggaataagtgttcatcacacaaataagttgaagatgtagagggataattgttgcttctgattgttttctgttttttgggctaagtttagttgtttcgtccttttataatttacactttagtataataactagccacatttgagcttagttaagttatttcgtccttttaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0022H01-shKvK/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0022H01.1" temp_strand="+" temp_description="C06SLm0022H01.1  AC216661.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0022H01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="96961" stop="98160"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="97261" g_stop="97869" g_length="609"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="614" r_length="614" r_score="0.974"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0022H01.1" gen_strand="+" ref_id="SGN-E375332" ref_strand="+">
        <total_alignment_score>0.974</total_alignment_score>
        <cumulative_length_of_scored_exons>609</cumulative_length_of_scored_exons>
        <coverage percentage="0.992" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0022H01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E375332" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="97261" e_stop="97869"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTTAAAGA-ACG-AATGATTTAGGGATTATATGATTGT-AATCTT-AATTTAGTCTCTCAACATGTTTGCGCATCGCGCGATCCT-AACAACTATTTTAAAAATAATGACCCTGAATACTTTGACATTGAGGTGTATATAGGGAACCAACGGATTGACCAAACAGATGGTAATTACATTTAATGTTAAAATTCAAATAATTTTAAGGATTAACATGTTTAATAAATATGTTGATAAATTTACTTTTTGAAGAACAATCAGGTATCTGTTGATGTGTTATTGACTGACTTGGAAGATTATGAGGATGAAGTACATGTAACTAATGGTGCTAAGAGTAGAAAACGAAGAAACCTAATCATAGATGATGAGGAATTAAGCATTCAAGACACAAATAAGGTCAAGAAGTAAAGGGATAATTGTTGGTCATAAATGACGAGGAATAAGTGTTCATCACACAAATAAGTTGAAGATGTAGAGGGATAATTGTTGCTTCTGATTGTTTTCTGTTTTTTGGGCTAAGTTTAGTTGTTTCGTCCTTTTATAATTTACACTTTAGTATAATAACTAGCCACATTTGAGCTTAGTTAAGTTATTTCGTCCTTTTACCATTTTAA</genome_strand>
        <mrna_strand>GTTTAAAGAAACGAAATGATTTAGGGATTATATGATTGTAAATCTTAAATTTAGTCTCTCAACATGTTTGCGCATCGCGCGATCCTAAACAACTATTTTAAAAATAATGACCCTGAATACTTTGACATTGAGGTGTATATAGGGAACCAACGGATTGACCAAACAGATGGTAATTACATTTAATGTTAAAATTCAAATAATTTTAAGGATTAACATGTTTAATAAATATGTTGATAAATTTACTTTTTGAAGAACAATCAGGTATCTGTTGATGTGTTATTGACTGACTTGGAAGATTATGAGGATGAAGTACATGTAACTAATGGTGCTAAGAGTAGAAAACGAAGAAACCTAATCATAGATGATGAGGAATTAAGCATTCAAGACACAAATAAGGTCAAGAAGTAAAGGGATAATTGTTGGTCATAAATGACGAGGAATAAGTGTTCATCACACAAATAAGTTGAAGATGTAGAGGGATAATTGTTGCTTCTGATTGTTTTCTGTTTTTTGGGCTAAGTTTAGTTGTTTCGTCCTTTTATAATTTACACTTTAGTATAATAACTAGCCACATTTGAGCTTAGTTAAGTTATTTCGTCCTTTTAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>177</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="-" PGL_start="60360" PGL_stop="17947"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="60360" e_stop="60115"/>
            <exon e_start="58521" e_stop="58364"/>
            <exon e_start="56929" e_stop="56851"/>
            <exon e_start="55007" e_stop="54771"/>
            <exon e_start="54062" e_stop="53958"/>
            <exon e_start="53658" e_stop="53554"/>
            <exon e_start="48191" e_stop="48057"/>
            <exon e_start="47932" e_stop="47846"/>
            <exon e_start="47196" e_stop="47139"/>
            <exon e_start="45770" e_stop="45707"/>
            <exon e_start="44813" e_stop="44714"/>
            <exon e_start="44371" e_stop="44271"/>
            <exon e_start="42438" e_stop="42387"/>
            <exon e_start="41386" e_stop="41324"/>
            <exon e_start="40219" e_stop="40130"/>
            <exon e_start="40046" e_stop="39974"/>
            <exon e_start="38022" e_stop="37943"/>
            <exon e_start="37449" e_stop="37345"/>
            <exon e_start="37270" e_stop="37172"/>
            <exon e_start="36339" e_stop="36278"/>
            <exon e_start="35280" e_stop="35172"/>
            <exon e_start="18258" e_stop="18036"/>
            <exon e_start="17977" e_stop="17947"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.957" acc_prob="0.965" e_score="0.866"/>
          <exon-intron don_prob="0.954" acc_prob="0.994" e_score="0.968"/>
          <exon-intron don_prob="0.997" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.861" acc_prob="0.696" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.980" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.291" e_score="0.990"/>
          <exon-intron don_prob="0.817" acc_prob="0.998" e_score="0.993"/>
          <exon-intron don_prob="0.995" acc_prob="0.971" e_score="1.000"/>
          <exon-intron don_prob="0.928" acc_prob="0.978" e_score="0.966"/>
          <exon-intron don_prob="0.957" acc_prob="0.421" e_score="0.969"/>
          <exon-intron don_prob="0.767" acc_prob="0.615" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.994" e_score="0.990"/>
          <exon-intron don_prob="0.959" acc_prob="0.969" e_score="1.000"/>
          <exon-intron don_prob="0.545" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.969" acc_prob="0.991" e_score="1.000"/>
          <exon-intron don_prob="0.982" acc_prob="0.983" e_score="1.000"/>
          <exon-intron don_prob="0.443" acc_prob="0.966" e_score="1.000"/>
          <exon-intron don_prob="0.884" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.968" acc_prob="0.713" e_score="0.960"/>
          <exon-intron don_prob="0.980" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.970" e_score="0.920"/>
          <exon-only e_score="0.613"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.866">
            <gDNA_exon_boundary e_start="60360" e_stop="60115" e_length="246"/>
          </exon>
          <intron i_serial="1" don_prob="0.957" acc_prob="0.965">
            <gDNA_intron_boundary i_start="60114" i_stop="58522" i_length="1593"/>
          </intron>
          <exon e_serial="2" e_score="0.968">
            <gDNA_exon_boundary e_start="58521" e_stop="58364" e_length="158"/>
          </exon>
          <intron i_serial="2" don_prob="0.954" acc_prob="0.994">
            <gDNA_intron_boundary i_start="58363" i_stop="56930" i_length="1434"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="56929" e_stop="56851" e_length="79"/>
          </exon>
          <intron i_serial="3" don_prob="0.997" acc_prob="0.993">
            <gDNA_intron_boundary i_start="56850" i_stop="55008" i_length="1843"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="55007" e_stop="54771" e_length="237"/>
          </exon>
          <intron i_serial="4" don_prob="0.861" acc_prob="0.696">
            <gDNA_intron_boundary i_start="54770" i_stop="54063" i_length="708"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="54062" e_stop="53958" e_length="105"/>
          </exon>
          <intron i_serial="5" don_prob="1.000" acc_prob="0.980">
            <gDNA_intron_boundary i_start="53957" i_stop="53659" i_length="299"/>
          </intron>
          <exon e_serial="6" e_score="0.990">
            <gDNA_exon_boundary e_start="53658" e_stop="53554" e_length="105"/>
          </exon>
          <intron i_serial="6" don_prob="0.994" acc_prob="0.291">
            <gDNA_intron_boundary i_start="53553" i_stop="48192" i_length="5362"/>
          </intron>
          <exon e_serial="7" e_score="0.993">
            <gDNA_exon_boundary e_start="48191" e_stop="48057" e_length="135"/>
          </exon>
          <intron i_serial="7" don_prob="0.817" acc_prob="0.998">
            <gDNA_intron_boundary i_start="48056" i_stop="47933" i_length="124"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="47932" e_stop="47846" e_length="87"/>
          </exon>
          <intron i_serial="8" don_prob="0.995" acc_prob="0.971">
            <gDNA_intron_boundary i_start="47845" i_stop="47197" i_length="649"/>
          </intron>
          <exon e_serial="9" e_score="0.966">
            <gDNA_exon_boundary e_start="47196" e_stop="47139" e_length="58"/>
          </exon>
          <intron i_serial="9" don_prob="0.928" acc_prob="0.978">
            <gDNA_intron_boundary i_start="47138" i_stop="45771" i_length="1368"/>
          </intron>
          <exon e_serial="10" e_score="0.969">
            <gDNA_exon_boundary e_start="45770" e_stop="45707" e_length="64"/>
          </exon>
          <intron i_serial="10" don_prob="0.957" acc_prob="0.421">
            <gDNA_intron_boundary i_start="45706" i_stop="44814" i_length="893"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="44813" e_stop="44714" e_length="100"/>
          </exon>
          <intron i_serial="11" don_prob="0.767" acc_prob="0.615">
            <gDNA_intron_boundary i_start="44713" i_stop="44372" i_length="342"/>
          </intron>
          <exon e_serial="12" e_score="0.990">
            <gDNA_exon_boundary e_start="44371" e_stop="44271" e_length="101"/>
          </exon>
          <intron i_serial="12" don_prob="0.996" acc_prob="0.994">
            <gDNA_intron_boundary i_start="44270" i_stop="42439" i_length="1832"/>
          </intron>
          <exon e_serial="13" e_score="1.000">
            <gDNA_exon_boundary e_start="42438" e_stop="42387" e_length="52"/>
          </exon>
          <intron i_serial="13" don_prob="0.959" acc_prob="0.969">
            <gDNA_intron_boundary i_start="42386" i_stop="41387" i_length="1000"/>
          </intron>
          <exon e_serial="14" e_score="1.000">
            <gDNA_exon_boundary e_start="41386" e_stop="41324" e_length="63"/>
          </exon>
          <intron i_serial="14" don_prob="0.545" acc_prob="0.996">
            <gDNA_intron_boundary i_start="41323" i_stop="40220" i_length="1104"/>
          </intron>
          <exon e_serial="15" e_score="1.000">
            <gDNA_exon_boundary e_start="40219" e_stop="40130" e_length="90"/>
          </exon>
          <intron i_serial="15" don_prob="0.969" acc_prob="0.991">
            <gDNA_intron_boundary i_start="40129" i_stop="40047" i_length="83"/>
          </intron>
          <exon e_serial="16" e_score="1.000">
            <gDNA_exon_boundary e_start="40046" e_stop="39974" e_length="73"/>
          </exon>
          <intron i_serial="16" don_prob="0.982" acc_prob="0.983">
            <gDNA_intron_boundary i_start="39973" i_stop="38023" i_length="1951"/>
          </intron>
          <exon e_serial="17" e_score="1.000">
            <gDNA_exon_boundary e_start="38022" e_stop="37943" e_length="80"/>
          </exon>
          <intron i_serial="17" don_prob="0.443" acc_prob="0.966">
            <gDNA_intron_boundary i_start="37942" i_stop="37450" i_length="493"/>
          </intron>
          <exon e_serial="18" e_score="1.000">
            <gDNA_exon_boundary e_start="37449" e_stop="37345" e_length="105"/>
          </exon>
          <intron i_serial="18" don_prob="0.884" acc_prob="0.000">
            <gDNA_intron_boundary i_start="37344" i_stop="37271" i_length="74"/>
          </intron>
          <exon e_serial="19" e_score="0.960">
            <gDNA_exon_boundary e_start="37270" e_stop="37172" e_length="99"/>
          </exon>
          <intron i_serial="19" don_prob="0.968" acc_prob="0.713">
            <gDNA_intron_boundary i_start="37171" i_stop="36340" i_length="832"/>
          </intron>
          <exon e_serial="20" e_score="1.000">
            <gDNA_exon_boundary e_start="36339" e_stop="36278" e_length="62"/>
          </exon>
          <intron i_serial="20" don_prob="0.980" acc_prob="0.994">
            <gDNA_intron_boundary i_start="36277" i_stop="35281" i_length="997"/>
          </intron>
          <exon e_serial="21" e_score="1.000">
            <gDNA_exon_boundary e_start="35280" e_stop="35172" e_length="109"/>
          </exon>
          <intron i_serial="21" don_prob="0.999" acc_prob="1.000">
            <gDNA_intron_boundary i_start="35171" i_stop="18259" i_length="16913"/>
          </intron>
          <exon e_serial="22" e_score="0.920">
            <gDNA_exon_boundary e_start="18258" e_stop="18036" e_length="223"/>
          </exon>
          <intron i_serial="22" don_prob="0.000" acc_prob="0.970">
            <gDNA_intron_boundary i_start="18035" i_stop="17978" i_length="58"/>
          </intron>
          <exon e_serial="23" e_score="0.613">
            <gDNA_exon_boundary e_start="17977" e_stop="17947" e_length="31"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60360" stop="60115"/>
              <exon start="58521" stop="58364"/>
              <exon start="56929" stop="56851"/>
              <exon start="55007" stop="54771"/>
              <exon start="54062" stop="53958"/>
              <exon start="53658" stop="53554"/>
              <exon start="48191" stop="48057"/>
              <exon start="47932" stop="47846"/>
              <exon start="47196" stop="47139"/>
              <exon start="45770" stop="45707"/>
              <exon start="44813" stop="44714"/>
              <exon start="44371" stop="44271"/>
              <exon start="42438" stop="42387"/>
              <exon start="41386" stop="41324"/>
              <exon start="40219" stop="40130"/>
              <exon start="40046" stop="39974"/>
              <exon start="38022" stop="37943"/>
              <exon start="37449" stop="37345"/>
              <exon start="37270" stop="37172"/>
              <exon start="36339" stop="36278"/>
              <exon start="35280" stop="35172"/>
              <exon start="18258" stop="18036"/>
              <exon start="17977" stop="17947"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E624401" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60360" stop="60115"/>
              <exon start="58521" stop="58364"/>
              <exon start="56929" stop="56851"/>
              <exon start="55007" stop="54771"/>
              <exon start="54062" stop="54013"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E423584" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60360" stop="60115"/>
              <exon start="58521" stop="58364"/>
              <exon start="56929" stop="56851"/>
              <exon start="55007" stop="54871"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E450758" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58381" stop="58364"/>
              <exon start="56929" stop="56851"/>
              <exon start="55007" stop="54771"/>
              <exon start="54062" stop="53958"/>
              <exon start="53658" stop="53571"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E391659" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47906" stop="47846"/>
              <exon start="47196" stop="47139"/>
              <exon start="45770" stop="45707"/>
              <exon start="44813" stop="44714"/>
              <exon start="44371" stop="44271"/>
              <exon start="42438" stop="42387"/>
              <exon start="41386" stop="41324"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E583265" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44787" stop="44714"/>
              <exon start="44371" stop="44271"/>
              <exon start="42438" stop="42387"/>
              <exon start="41386" stop="41324"/>
              <exon start="40219" stop="40130"/>
              <exon start="40046" stop="39974"/>
              <exon start="38022" stop="37943"/>
              <exon start="37449" stop="37345"/>
              <exon start="37270" stop="37233"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E731172" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44288" stop="44271"/>
              <exon start="42438" stop="42387"/>
              <exon start="41386" stop="41324"/>
              <exon start="40219" stop="40130"/>
              <exon start="40046" stop="39974"/>
              <exon start="38022" stop="37943"/>
              <exon start="37449" stop="37345"/>
              <exon start="37270" stop="37248"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E237532" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="41386" stop="41324"/>
              <exon start="40219" stop="40130"/>
              <exon start="40046" stop="39974"/>
              <exon start="38022" stop="37943"/>
              <exon start="37449" stop="37345"/>
              <exon start="37270" stop="37172"/>
              <exon start="36339" stop="36278"/>
              <exon start="35280" stop="35172"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E451254" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37400" stop="37345"/>
              <exon start="37270" stop="37172"/>
              <exon start="36339" stop="36278"/>
              <exon start="35280" stop="35172"/>
              <exon start="18258" stop="18058"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E423585" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CAACGATTCTCTTCTCCAAAATAGGGCCCGATGATAAGAGGACCACCACAAATCGTCCAGAAATGTACCACCGGCATTGTAACTGTTAACCGGACCAATATAGTTCAACGAACTCACCGTCACGATCTCCGGCAGCTTAGCCGGCGTGATAGTCTAAGGCTCTTCTCCTCTGACCACCGGATTCTGAAGTTTTGTACATCGGAGGAGGCGCTCCTACCTAGGTTGGTGGCAGCAGCTAAGCTTCAG : GAAGAAGCTCCTCAAATGCTGGACACTTTACCTTCATTCGAAGTTTCCCCTGGTCTGACTCATCCACTAGGAGTATCAGAAATTGAAAGTGGAATAAATTTTGCAATTTTTTCGCAGCATGCTTCTGCAGTTACACTTTGCATAATTCTTCCAAAGAG : TGTTCATGATGGAATGATTGAATTAGCATTGGATCCACAGAAGAACCGCACCGGAGACATATGGCACATATGCATTAAG : GAGTTGCCCCGAGGTGGGGTCCTTTATGGTTATCGCATTGATGGACCTCGAAATTGGCATGAAGGGCATCGATTTGACGATAGCATTATTTTGATTGATCCTTACGCAAAACTAATTGAAGGTCGACGAGCTTTTGGAGATGAAAGCAATAAAATGTGTAGATTTTTTGGAACTTATGATTTCAATAGCTTGCCTTTTGACTGGGGAGAAAATTACAAGCTTCCAAATGTACCGGAG : AAAGATCTTGTTATATATGAGATGAATGTTCGTGCTTTTACTGCTGATGAAACAAGTAGTTTGGATCAAGATCAACGGGGAAGTTACCTTGGCTTAATTGAAAAG : ATACCACATCTTCTCGAGCTTGGTGTCAATACAGTAGAATTATTGCCTGTTTTTGAGTTTGATGAACTGGAATTACAAAGGCGACCTAATCCGAGAGATCACATG : ATCAATACATGGGGCTACTCAACAATAAACTTTTTTGCTCCAATGAGTCGATATGCAAGTTGTGGTGGCGGACCTGTCCGTGCTTCCTGGGAGTTAAAAGAAATGGTCAAGGCCTTGCATGGTGCTGGAATTGAG : GTCATCTTAGATGTTGTTTATAATCACACAAATGAAGCTGATGATGAAAACCCATATACAACCTCATTCCGAGGAATAGACAACAAG : GTTTATTACATGGTAGATTTGAACAACAATGCTCAGCTGCTGAATTTCTCTGGATGTG : GTAATACTTTTAACTGCAACCATCCTACCGTCATGGAACTTATACTTGAAAGCTTAAGACACTG : GGTCACCGAGTATCATGTCGATGGATTTCGCTTTGATCTTGCTAGTGTTCTTTGCAGAGGGACAGATGGTACTCCCATTAATGCTCCCCCCTTGGTTAAG : GCCATTTCCAGAGATAGTGTATTGTCGAGGTGCAAAATTATTGCTGAGCCATGGGATTGTGGAGGCCTATATCTTGTTGGGAAGTTTCCGAACTGGGACCG : GTGGGCTGAGTGGAACGGGAAGTACCGTGATGACATCAGAAGATTTATAAAG : GGCGATGCTGGCATGAAAGGAAATTTTGCAACCCGTATCGCAGGTTCAGCAGATCTGTACAGA : GTGAACAAGCGAAAACCTTACCACAGTGTCAACTTCGTGATTGCCCATGATGGCTTTACTTTGTATGACCTTGTTTCATACAATAATAAG : CACAATGATGCGAATGGTGAAGGTGGCAATGATGGATGCAATGACAATTTCAGTTGGAATTGTGGTATTGAAG : GTGAAACTTCAGATGCAAATGTTAACGAACTGCGTTCACGGCAAATGAAAAATTTTCATTTGGCACTGATGGTTTCTCAG : GGAACACCAATGATGCTTATGGGTGATGAGTACGGGCATACCCGCTATGGAAATAATAACAGTTATGGACATGATACCGCCATCAACAATTTCCAGTGGGGACAA : TTGGAAGCAAGGAGGAATGATCACTTCAGGTTCTTTTCCAAGATGATAAAGTTTCGACTGTCCCATAATGTTCTAAGAAAGGAAAATTTCATTGAGAAG : AACGACATTACCTGGCTCGAGGACAACTGGTACAATGAAGAGAGTAGATTCCTTGCATTTAT : GCTCCATGATGGGAATGGAGGAGATATTTACTTGGCATTTAATGCACACCACTTCTCCATCAAAACAGCAATACCTTCACCACCACGAAATAGAAGTTGGTACCGAGTG : GTGGACACTAATCTGAAATCACCAGATGATTTTGTTACTGAGGGAGTGTCTGGTATCCGTGAAACTTATGATATTGCGCCGTACTCTGCTATCCTTCTTGAAGCAAAGTAATAATTACCGGAGTTATGCTGCTTTGGATGTTGTTCATGTCTATTACACTATTACGTCCTTCTGGATTGGATAGTTAAAATCGAAATTCAGGTGCTAATATAAGCATATAGTT : GCTGCCATTGACAGGTGCCAGGTTGTTTGAG</gDNA_template>
            <first_frame> Q  R  F  S  S  P  K  *  G  P  M  I  R  G  P  P  Q  I  V  Q  K  C  T  T  G  I  V  T  V  N  R  T  N  I  V  Q  R  T  H  R  H  D  L  R  Q  L  S  R  R  D  S  L  R  L  F  S  S  D  H  R  I  L  K  F  C  T  S  E  E  A  L  L  P  R  L  V  A  A  A  K  L  Q  :  E  E  A  P  Q  M  L  D  T  L  P  S  F  E  V  S  P  G  L  T  H  P  L  G  V  S  E  I  E  S  G  I  N  F  A  I  F  S  Q  H  A  S  A  V  T  L  C  I  I  L  P  K  S :   V  H  D  G  M  I  E  L  A  L  D  P  Q  K  N  R  T  G  D  I  W  H  I  C  I  K  :  E  L  P  R  G  G  V  L  Y  G  Y  R  I  D  G  P  R  N  W  H  E  G  H  R  F  D  D  S  I  I  L  I  D  P  Y  A  K  L  I  E  G  R  R  A  F  G  D  E  S  N  K  M  C  R  F  F  G  T  Y  D  F  N  S  L  P  F  D  W  G  E  N  Y  K  L  P  N  V  P  E  :  K  D  L  V  I  Y  E  M  N  V  R  A  F  T  A  D  E  T  S  S  L  D  Q  D  Q  R  G  S  Y  L  G  L  I  E  K  :  I  P  H  L  L  E  L  G  V  N  T  V  E  L  L  P  V  F  E  F  D  E  L  E  L  Q  R  R  P  N  P  R  D  H  M  :  I  N  T  W  G  Y  S  T  I  N  F  F  A  P  M  S  R  Y  A  S  C  G  G  G  P  V  R  A  S  W  E  L  K  E  M  V  K  A  L  H  G  A  G  I  E  :  V  I  L  D  V  V  Y  N  H  T  N  E  A  D  D  E  N  P  Y  T  T  S  F  R  G  I  D  N  K  :  V  Y  Y  M  V  D  L  N  N  N  A  Q  L  L  N  F  S  G  C   : G  N  T  F  N  C  N  H  P  T  V  M  E  L  I  L  E  S  L  R  H  W :   V  T  E  Y  H  V  D  G  F  R  F  D  L  A  S  V  L  C  R  G  T  D  G  T  P  I  N  A  P  P  L  V  K  :  A  I  S  R  D  S  V  L  S  R  C  K  I  I  A  E  P  W  D  C  G  G  L  Y  L  V  G  K  F  P  N  W  D  R :   W  A  E  W  N  G  K  Y  R  D  D  I  R  R  F  I  K  :  G  D  A  G  M  K  G  N  F  A  T  R  I  A  G  S  A  D  L  Y  R  :  V  N  K  R  K  P  Y  H  S  V  N  F  V  I  A  H  D  G  F  T  L  Y  D  L  V  S  Y  N  N  K  :  H  N  D  A  N  G  E  G  G  N  D  G  C  N  D  N  F  S  W  N  C  G  I  E   : G  E  T  S  D  A  N  V  N  E  L  R  S  R  Q  M  K  N  F  H  L  A  L  M  V  S  Q  :  G  T  P  M  M  L  M  G  D  E  Y  G  H  T  R  Y  G  N  N  N  S  Y  G  H  D  T  A  I  N  N  F  Q  W  G  Q  :  L  E  A  R  R  N  D  H  F  R  F  F  S  K  M  I  K  F  R  L  S  H  N  V  L  R  K  E  N  F  I  E  K  :  N  D  I  T  W  L  E  D  N  W  Y  N  E  E  S  R  F  L  A  F  M :   L  H  D  G  N  G  G  D  I  Y  L  A  F  N  A  H  H  F  S  I  K  T  A  I  P  S  P  P  R  N  R  S  W  Y  R  V  :  V  D  T  N  L  K  S  P  D  D  F  V  T  E  G  V  S  G  I  R  E  T  Y  D  I  A  P  Y  S  A  I  L  L  E  A  K  *  *  L  P  E  L  C  C  F  G  C  C  S  C  L  L  H  Y  Y  V  L  L  D  W  I  V  K  I  E  I  Q  V  L  I  *  A  Y  S   : C  C  H  *  Q  V  P  G  C  L   </first_frame>
            <second_frame>  N  D  S  L  L  Q  N  R  A  R  *  *  E  D  H  H  K  S  S  R  N  V  P  P  A  L  *  L  L  T  G  P  I  *  F  N  E  L  T  V  T  I  S  G  S  L  A  G  V  I  V  *  G  S  S  P  L  T  T  G  F  *  S  F  V  H  R  R  R  R  S  Y  L  G  W  W  Q  Q  L  S  F  R :   K  K  L  L  K  C  W  T  L  Y  L  H  S  K  F  P  L  V  *  L  I  H  *  E  Y  Q  K  L  K  V  E  *  I  L  Q  F  F  R  S  M  L  L  Q  L  H  F  A  *  F  F  Q  R   : V  F  M  M  E  *  L  N  *  H  W  I  H  R  R  T  A  P  E  T  Y  G  T  Y  A  L  R :   S  C  P  E  V  G  S  F  M  V  I  A  L  M  D  L  E  I  G  M  K  G  I  D  L  T  I  A  L  F  *  L  I  L  T  Q  N  *  L  K  V  D  E  L  L  E  M  K  A  I  K  C  V  D  F  L  E  L  M  I  S  I  A  C  L  L  T  G  E  K  I  T  S  F  Q  M  Y  R  R :   K  I  L  L  Y  M  R  *  M  F  V  L  L  L  L  M  K  Q  V  V  W  I  K  I  N  G  E  V  T  L  A  *  L  K  R :   Y  H  I  F  S  S  L  V  S  I  Q  *  N  Y  C  L  F  L  S  L  M  N  W  N  Y  K  G  D  L  I  R  E  I  T  * :   S  I  H  G  A  T  Q  Q  *  T  F  L  L  Q  *  V  D  M  Q  V  V  V  A  D  L  S  V  L  P  G  S  *  K  K  W  S  R  P  C  M  V  L  E  L  R :   S  S  *  M  L  F  I  I  T  Q  M  K  L  M  M  K  T  H  I  Q  P  H  S  E  E  *  T  T  R :   F  I  T  W  *  I  *  T  T  M  L  S  C  *  I  S  L  D  V  :  V  I  L  L  T  A  T  I  L  P  S  W  N  L  Y  L  K  A  *  D  T   : G  S  P  S  I  M  S  M  D  F  A  L  I  L  L  V  F  F  A  E  G  Q  M  V  L  P  L  M  L  P  P  W  L  R :   P  F  P  E  I  V  Y  C  R  G  A  K  L  L  L  S  H  G  I  V  E  A  Y  I  L  L  G  S  F  R  T  G  T   : G  G  L  S  G  T  G  S  T  V  M  T  S  E  D  L  *  R :   A  M  L  A  *  K  E  I  L  Q  P  V  S  Q  V  Q  Q  I  C  T  E :   *  T  S  E  N  L  T  T  V  S  T  S  *  L  P  M  M  A  L  L  C  M  T  L  F  H  T  I  I  S :   T  M  M  R  M  V  K  V  A  M  M  D  A  M  T  I  S  V  G  I  V  V  L  K  :  V  K  L  Q  M  Q  M  L  T  N  C  V  H  G  K  *  K  I  F  I  W  H  *  W  F  L  R :   E  H  Q  *  C  L  W  V  M  S  T  G  I  P  A  M  E  I  I  T  V  M  D  M  I  P  P  S  T  I  S  S  G  D  N :   W  K  Q  G  G  M  I  T  S  G  S  F  P  R  *  *  S  F  D  C  P  I  M  F  *  E  R  K  I  S  L  R  R :   T  T  L  P  G  S  R  T  T  G  T  M  K  R  V  D  S  L  H  L   : C  S  M  M  G  M  E  E  I  F  T  W  H  L  M  H  T  T  S  P  S  K  Q  Q  Y  L  H  H  H  E  I  E  V  G  T  E  W :   W  T  L  I  *  N  H  Q  M  I  L  L  L  R  E  C  L  V  S  V  K  L  M  I  L  R  R  T  L  L  S  F  L  K  Q  S  N  N  Y  R  S  Y  A  A  L  D  V  V  H  V  Y  Y  T  I  T  S  F  W  I  G  *  L  K  S  K  F  R  C  *  Y  K  H  I  V  :  A  A  I  D  R  C  Q  V  V  *  </second_frame>
            <third_frame>   T  I  L  F  S  K  I  G  P  D  D  K  R  T  T  T  N  R  P  E  M  Y  H  R  H  C  N  C  *  P  D  Q  Y  S  S  T  N  S  P  S  R  S  P  A  A  *  P  A  *  *  S  K  A  L  L  L  *  P  P  D  S  E  V  L  Y  I  G  G  G  A  P  T  *  V  G  G  S  S  *  A  S   : G  R  S  S  S  N  A  G  H  F  T  F  I  R  S  F  P  W  S  D  S  S  T  R  S  I  R  N  *  K  W  N  K  F  C  N  F  F  A  A  C  F  C  S  Y  T  L  H  N  S  S  K  E  :  C  S  *  W  N  D  *  I  S  I  G  S  T  E  E  P  H  R  R  H  M  A  H  M  H  *   : G  V  A  P  R  W  G  P  L  W  L  S  H  *  W  T  S  K  L  A  *  R  A  S  I  *  R  *  H  Y  F  D  *  S  L  R  K  T  N  *  R  S  T  S  F  W  R  *  K  Q  *  N  V  *  I  F  W  N  L  *  F  Q  *  L  A  F  *  L  G  R  K  L  Q  A  S  K  C  T  G   : E  R  S  C  Y  I  *  D  E  C  S  C  F  Y  C  *  *  N  K  *  F  G  S  R  S  T  G  K  L  P  W  L  N  *  K   : D  T  T  S  S  R  A  W  C  Q  Y  S  R  I  I  A  C  F  *  V  *  *  T  G  I  T  K  A  T  *  S  E  R  S  H   : D  Q  Y  M  G  L  L  N  N  K  L  F  C  S  N  E  S  I  C  K  L  W  W  R  T  C  P  C  F  L  G  V  K  R  N  G  Q  G  L  A  W  C  W  N  *   : G  H  L  R  C  C  L  *  S  H  K  *  S  *  *  *  K  P  I  Y  N  L  I  P  R  N  R  Q  Q   : G  L  L  H  G  R  F  E  Q  Q  C  S  A  A  E  F  L  W  M  W :   *  Y  F  *  L  Q  P  S  Y  R  H  G  T  Y  T  *  K  L  K  T  L  :  G  H  R  V  S  C  R  W  I  S  L  *  S  C  *  C  S  L  Q  R  D  R  W  Y  S  H  *  C  S  P  L  G  *   : G  H  F  Q  R  *  C  I  V  E  V  Q  N  Y  C  *  A  M  G  L  W  R  P  I  S  C  W  E  V  S  E  L  G  P  :  V  G  *  V  E  R  E  V  P  *  *  H  Q  K  I  Y  K   : G  R  C  W  H  E  R  K  F  C  N  P  Y  R  R  F  S  R  S  V  Q   : S  E  Q  A  K  T  L  P  Q  C  Q  L  R  D  C  P  *  W  L  Y  F  V  *  P  C  F  I  Q  *  *   : A  Q  *  C  E  W  *  R  W  Q  *  W  M  Q  *  Q  F  Q  L  E  L  W  Y  *  R :   *  N  F  R  C  K  C  *  R  T  A  F  T  A  N  E  K  F  S  F  G  T  D  G  F  S   : G  N  T  N  D  A  Y  G  *  *  V  R  A  Y  P  L  W  K  *  *  Q  L  W  T  *  Y  R  H  Q  Q  F  P  V  G  T   : I  G  S  K  E  E  *  S  L  Q  V  L  F  Q  D  D  K  V  S  T  V  P  *  C  S  K  K  G  K  F  H  *  E   : E  R  H  Y  L  A  R  G  Q  L  V  Q  *  R  E  *  I  P  C  I  Y  :  A  P  *  W  E  W  R  R  Y  L  L  G  I  *  C  T  P  L  L  H  Q  N  S  N  T  F  T  T  T  K  *  K  L  V  P  S   : G  G  H  *  S  E  I  T  R  *  F  C  Y  *  G  S  V  W  Y  P  *  N  L  *  Y  C  A  V  L  C  Y  P  S  *  S  K  V  I  I  T  G  V  M  L  L  W  M  L  F  M  S  I  T  L  L  R  P  S  G  L  D  S  *  N  R  N  S  G  A  N  I  S  I  *  L :   L  P  L  T  G  A  R  L  F  E </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06SLm0022H01.1" strand="-"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="60336" stop="60115"/>
                    <exon start="58521" stop="58364"/>
                    <exon start="56929" stop="56851"/>
                    <exon start="55007" stop="54771"/>
                    <exon start="54062" stop="53958"/>
                    <exon start="53658" stop="53554"/>
                    <exon start="48191" stop="48057"/>
                    <exon start="47932" stop="47846"/>
                    <exon start="47196" stop="47139"/>
                    <exon start="45770" stop="45707"/>
                    <exon start="44813" stop="44714"/>
                    <exon start="44371" stop="44271"/>
                    <exon start="42438" stop="42387"/>
                    <exon start="41386" stop="41324"/>
                    <exon start="40219" stop="40130"/>
                    <exon start="40046" stop="39974"/>
                    <exon start="38022" stop="37943"/>
                    <exon start="37449" stop="37345"/>
                    <exon start="37270" stop="37172"/>
                    <exon start="36339" stop="36278"/>
                    <exon start="35280" stop="35172"/>
                    <exon start="18258" stop="18148"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>2292</number_coding_nucleotides>
                  <number_encoded_amino_acids>764</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GPMIRGPPQIVQKCTTGIVTVNRTNIVQRTHRHDLRQLSRRDSLRLFSSDHRILKFCTSEEALLPRLVAAAKLQEEAPQMLDTLPSFEVSPGLTHPLGVSEIESGINFAIFSQHASAVTLCIILPKSVHDGMIELALDPQKNRTGDIWHICIKELPRGGVLYGYRIDGPRNWHEGHRFDDSIILIDPYAKLIEGRRAFGDESNKMCRFFGTYDFNSLPFDWGENYKLPNVPEKDLVIYEMNVRAFTADETSSLDQDQRGSYLGLIEKIPHLLELGVNTVELLPVFEFDELELQRRPNPRDHMINTWGYSTINFFAPMSRYASCGGGPVRASWELKEMVKALHGAGIEVILDVVYNHTNEADDENPYTTSFRGIDNKVYYMVDLNNNAQLLNFSGCGNTFNCNHPTVMELILESLRHWVTEYHVDGFRFDLASVLCRGTDGTPINAPPLVKAISRDSVLSRCKIIAEPWDCGGLYLVGKFPNWDRWAEWNGKYRDDIRRFIKGDAGMKGNFATRIAGSADLYRVNKRKPYHSVNFVIAHDGFTLYDLVSYNNKHNDANGEGGNDGCNDNFSWNCGIEGETSDANVNELRSRQMKNFHLALMVSQGTPMMLMGDEYGHTRYGNNNSYGHDTAINNFQWGQLEARRNDHFRFFSKMIKFRLSHNVLRKENFIEKNDITWLEDNWYNEESRFLAFMLHDGNGGDIYLAFNAHHFSIKTAIPSPPRNRSWYRVVDTNLKSPDDFVTEGVSGIRETYDIAPYSAILLEAK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="60360" e_stop="60115"/>
            <exon e_start="58521" e_stop="58364"/>
            <exon e_start="56929" e_stop="56851"/>
            <exon e_start="55007" e_stop="54771"/>
            <exon e_start="54062" e_stop="53958"/>
            <exon e_start="53658" e_stop="53554"/>
            <exon e_start="47196" e_stop="47139"/>
            <exon e_start="45770" e_stop="45707"/>
            <exon e_start="44813" e_stop="44714"/>
            <exon e_start="44371" e_stop="44271"/>
            <exon e_start="42438" e_stop="42387"/>
            <exon e_start="41386" e_stop="41324"/>
            <exon e_start="40219" e_stop="40130"/>
            <exon e_start="40046" e_stop="39974"/>
            <exon e_start="38022" e_stop="37943"/>
            <exon e_start="37449" e_stop="37345"/>
            <exon e_start="37270" e_stop="37172"/>
            <exon e_start="36339" e_stop="36278"/>
            <exon e_start="35280" e_stop="35172"/>
            <exon e_start="34956" e_stop="34919"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.957" acc_prob="0.965" e_score="0.866"/>
          <exon-intron don_prob="0.954" acc_prob="0.994" e_score="0.956"/>
          <exon-intron don_prob="0.997" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.861" acc_prob="0.696" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.980" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.971" e_score="1.000"/>
          <exon-intron don_prob="0.928" acc_prob="0.978" e_score="1.000"/>
          <exon-intron don_prob="0.957" acc_prob="0.421" e_score="1.000"/>
          <exon-intron don_prob="0.767" acc_prob="0.615" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.994" e_score="0.990"/>
          <exon-intron don_prob="0.959" acc_prob="0.969" e_score="1.000"/>
          <exon-intron don_prob="0.545" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.969" acc_prob="0.991" e_score="1.000"/>
          <exon-intron don_prob="0.982" acc_prob="0.983" e_score="1.000"/>
          <exon-intron don_prob="0.443" acc_prob="0.966" e_score="1.000"/>
          <exon-intron don_prob="0.884" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.968" acc_prob="0.713" e_score="0.939"/>
          <exon-intron don_prob="0.980" acc_prob="0.994" e_score="0.984"/>
          <exon-intron don_prob="0.999" acc_prob="0.811" e_score="1.000"/>
          <exon-only e_score="0.474"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.866">
            <gDNA_exon_boundary e_start="60360" e_stop="60115" e_length="246"/>
          </exon>
          <intron i_serial="1" don_prob="0.957" acc_prob="0.965">
            <gDNA_intron_boundary i_start="60114" i_stop="58522" i_length="1593"/>
          </intron>
          <exon e_serial="2" e_score="0.956">
            <gDNA_exon_boundary e_start="58521" e_stop="58364" e_length="158"/>
          </exon>
          <intron i_serial="2" don_prob="0.954" acc_prob="0.994">
            <gDNA_intron_boundary i_start="58363" i_stop="56930" i_length="1434"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="56929" e_stop="56851" e_length="79"/>
          </exon>
          <intron i_serial="3" don_prob="0.997" acc_prob="0.993">
            <gDNA_intron_boundary i_start="56850" i_stop="55008" i_length="1843"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="55007" e_stop="54771" e_length="237"/>
          </exon>
          <intron i_serial="4" don_prob="0.861" acc_prob="0.696">
            <gDNA_intron_boundary i_start="54770" i_stop="54063" i_length="708"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="54062" e_stop="53958" e_length="105"/>
          </exon>
          <intron i_serial="5" don_prob="1.000" acc_prob="0.980">
            <gDNA_intron_boundary i_start="53957" i_stop="53659" i_length="299"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="53658" e_stop="53554" e_length="105"/>
          </exon>
          <intron i_serial="6" don_prob="0.994" acc_prob="0.971">
            <gDNA_intron_boundary i_start="53553" i_stop="47197" i_length="6357"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="47196" e_stop="47139" e_length="58"/>
          </exon>
          <intron i_serial="7" don_prob="0.928" acc_prob="0.978">
            <gDNA_intron_boundary i_start="47138" i_stop="45771" i_length="1368"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="45770" e_stop="45707" e_length="64"/>
          </exon>
          <intron i_serial="8" don_prob="0.957" acc_prob="0.421">
            <gDNA_intron_boundary i_start="45706" i_stop="44814" i_length="893"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="44813" e_stop="44714" e_length="100"/>
          </exon>
          <intron i_serial="9" don_prob="0.767" acc_prob="0.615">
            <gDNA_intron_boundary i_start="44713" i_stop="44372" i_length="342"/>
          </intron>
          <exon e_serial="10" e_score="0.990">
            <gDNA_exon_boundary e_start="44371" e_stop="44271" e_length="101"/>
          </exon>
          <intron i_serial="10" don_prob="0.996" acc_prob="0.994">
            <gDNA_intron_boundary i_start="44270" i_stop="42439" i_length="1832"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="42438" e_stop="42387" e_length="52"/>
          </exon>
          <intron i_serial="11" don_prob="0.959" acc_prob="0.969">
            <gDNA_intron_boundary i_start="42386" i_stop="41387" i_length="1000"/>
          </intron>
          <exon e_serial="12" e_score="1.000">
            <gDNA_exon_boundary e_start="41386" e_stop="41324" e_length="63"/>
          </exon>
          <intron i_serial="12" don_prob="0.545" acc_prob="0.996">
            <gDNA_intron_boundary i_start="41323" i_stop="40220" i_length="1104"/>
          </intron>
          <exon e_serial="13" e_score="1.000">
            <gDNA_exon_boundary e_start="40219" e_stop="40130" e_length="90"/>
          </exon>
          <intron i_serial="13" don_prob="0.969" acc_prob="0.991">
            <gDNA_intron_boundary i_start="40129" i_stop="40047" i_length="83"/>
          </intron>
          <exon e_serial="14" e_score="1.000">
            <gDNA_exon_boundary e_start="40046" e_stop="39974" e_length="73"/>
          </exon>
          <intron i_serial="14" don_prob="0.982" acc_prob="0.983">
            <gDNA_intron_boundary i_start="39973" i_stop="38023" i_length="1951"/>
          </intron>
          <exon e_serial="15" e_score="1.000">
            <gDNA_exon_boundary e_start="38022" e_stop="37943" e_length="80"/>
          </exon>
          <intron i_serial="15" don_prob="0.443" acc_prob="0.966">
            <gDNA_intron_boundary i_start="37942" i_stop="37450" i_length="493"/>
          </intron>
          <exon e_serial="16" e_score="1.000">
            <gDNA_exon_boundary e_start="37449" e_stop="37345" e_length="105"/>
          </exon>
          <intron i_serial="16" don_prob="0.884" acc_prob="0.000">
            <gDNA_intron_boundary i_start="37344" i_stop="37271" i_length="74"/>
          </intron>
          <exon e_serial="17" e_score="0.939">
            <gDNA_exon_boundary e_start="37270" e_stop="37172" e_length="99"/>
          </exon>
          <intron i_serial="17" don_prob="0.968" acc_prob="0.713">
            <gDNA_intron_boundary i_start="37171" i_stop="36340" i_length="832"/>
          </intron>
          <exon e_serial="18" e_score="0.984">
            <gDNA_exon_boundary e_start="36339" e_stop="36278" e_length="62"/>
          </exon>
          <intron i_serial="18" don_prob="0.980" acc_prob="0.994">
            <gDNA_intron_boundary i_start="36277" i_stop="35281" i_length="997"/>
          </intron>
          <exon e_serial="19" e_score="1.000">
            <gDNA_exon_boundary e_start="35280" e_stop="35172" e_length="109"/>
          </exon>
          <intron i_serial="19" don_prob="0.999" acc_prob="0.811">
            <gDNA_intron_boundary i_start="35171" i_stop="34957" i_length="215"/>
          </intron>
          <exon e_serial="20" e_score="0.474">
            <gDNA_exon_boundary e_start="34956" e_stop="34919" e_length="38"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60360" stop="60115"/>
              <exon start="58521" stop="58364"/>
              <exon start="56929" stop="56851"/>
              <exon start="55007" stop="54771"/>
              <exon start="54062" stop="54013"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E423584" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60360" stop="60115"/>
              <exon start="58521" stop="58364"/>
              <exon start="56929" stop="56851"/>
              <exon start="55007" stop="54871"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E450758" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58381" stop="58364"/>
              <exon start="56929" stop="56851"/>
              <exon start="55007" stop="54771"/>
              <exon start="54062" stop="53958"/>
              <exon start="53658" stop="53571"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E391659" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="56929" stop="56851"/>
              <exon start="55007" stop="54771"/>
              <exon start="54062" stop="53958"/>
              <exon start="53658" stop="53554"/>
              <exon start="47196" stop="47139"/>
              <exon start="45770" stop="45707"/>
              <exon start="44813" stop="44718"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E246576" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44787" stop="44714"/>
              <exon start="44371" stop="44271"/>
              <exon start="42438" stop="42387"/>
              <exon start="41386" stop="41324"/>
              <exon start="40219" stop="40130"/>
              <exon start="40046" stop="39974"/>
              <exon start="38022" stop="37943"/>
              <exon start="37449" stop="37345"/>
              <exon start="37270" stop="37233"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E731172" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44288" stop="44271"/>
              <exon start="42438" stop="42387"/>
              <exon start="41386" stop="41324"/>
              <exon start="40219" stop="40130"/>
              <exon start="40046" stop="39974"/>
              <exon start="38022" stop="37943"/>
              <exon start="37449" stop="37345"/>
              <exon start="37270" stop="37248"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E237532" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="41386" stop="41324"/>
              <exon start="40219" stop="40130"/>
              <exon start="40046" stop="39974"/>
              <exon start="38022" stop="37943"/>
              <exon start="37449" stop="37345"/>
              <exon start="37270" stop="37172"/>
              <exon start="36339" stop="36278"/>
              <exon start="35280" stop="35172"/>
              <exon start="34956" stop="34919"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E423884" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="41386" stop="41324"/>
              <exon start="40219" stop="40130"/>
              <exon start="40046" stop="39974"/>
              <exon start="38022" stop="37943"/>
              <exon start="37449" stop="37345"/>
              <exon start="37270" stop="37172"/>
              <exon start="36339" stop="36278"/>
              <exon start="35280" stop="35172"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E451254" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CAACGATTCTCTTCTCCAAAATAGGGCCCGATGATAAGAGGACCACCACAAATCGTCCAGAAATGTACCACCGGCATTGTAACTGTTAACCGGACCAATATAGTTCAACGAACTCACCGTCACGATCTCCGGCAGCTTAGCCGGCGTGATAGTCTAAGGCTCTTCTCCTCTGACCACCGGATTCTGAAGTTTTGTACATCGGAGGAGGCGCTCCTACCTAGGTTGGTGGCAGCAGCTAAGCTTCAG : GAAGAAGCTCCTCAAATGCTGGACACTTTACCTTCATTCGAAGTTTCCCCTGGTCTGACTCATCCACTAGGAGTATCAGAAATTGAAAGTGGAATAAATTTTGCAATTTTTTCGCAGCATGCTTCTGCAGTTACACTTTGCATAATTCTTCCAAAGAG : TGTTCATGATGGAATGATTGAATTAGCATTGGATCCACAGAAGAACCGCACCGGAGACATATGGCACATATGCATTAAG : GAGTTGCCCCGAGGTGGGGTCCTTTATGGTTATCGCATTGATGGACCTCGAAATTGGCATGAAGGGCATCGATTTGACGATAGCATTATTTTGATTGATCCTTACGCAAAACTAATTGAAGGTCGACGAGCTTTTGGAGATGAAAGCAATAAAATGTGTAGATTTTTTGGAACTTATGATTTCAATAGCTTGCCTTTTGACTGGGGAGAAAATTACAAGCTTCCAAATGTACCGGAG : AAAGATCTTGTTATATATGAGATGAATGTTCGTGCTTTTACTGCTGATGAAACAAGTAGTTTGGATCAAGATCAACGGGGAAGTTACCTTGGCTTAATTGAAAAG : ATACCACATCTTCTCGAGCTTGGTGTCAATACAGTAGAATTATTGCCTGTTTTTGAGTTTGATGAACTGGAATTACAAAGGCGACCTAATCCGAGAGATCACATG : GTTTATTACATGGTAGATTTGAACAACAATGCTCAGCTGCTGAATTTCTCTGGATGTG : GTAATACTTTTAACTGCAACCATCCTACCGTCATGGAACTTATACTTGAAAGCTTAAGACACTG : GGTCACCGAGTATCATGTCGATGGATTTCGCTTTGATCTTGCTAGTGTTCTTTGCAGAGGGACAGATGGTACTCCCATTAATGCTCCCCCCTTGGTTAAG : GCCATTTCCAGAGATAGTGTATTGTCGAGGTGCAAAATTATTGCTGAGCCATGGGATTGTGGAGGCCTATATCTTGTTGGGAAGTTTCCGAACTGGGACCG : GTGGGCTGAGTGGAACGGGAAGTACCGTGATGACATCAGAAGATTTATAAAG : GGCGATGCTGGCATGAAAGGAAATTTTGCAACCCGTATCGCAGGTTCAGCAGATCTGTACAGA : GTGAACAAGCGAAAACCTTACCACAGTGTCAACTTCGTGATTGCCCATGATGGCTTTACTTTGTATGACCTTGTTTCATACAATAATAAG : CACAATGATGCGAATGGTGAAGGTGGCAATGATGGATGCAATGACAATTTCAGTTGGAATTGTGGTATTGAAG : GTGAAACTTCAGATGCAAATGTTAACGAACTGCGTTCACGGCAAATGAAAAATTTTCATTTGGCACTGATGGTTTCTCAG : GGAACACCAATGATGCTTATGGGTGATGAGTACGGGCATACCCGCTATGGAAATAATAACAGTTATGGACATGATACCGCCATCAACAATTTCCAGTGGGGACAA : TTGGAAGCAAGGAGGAATGATCACTTCAGGTTCTTTTCCAAGATGATAAAGTTTCGACTGTCCCATAATGTTCTAAGAAAGGAAAATTTCATTGAGAAG : AACGACATTACCTGGCTCGAGGACAACTGGTACAATGAAGAGAGTAGATTCCTTGCATTTAT : GCTCCATGATGGGAATGGAGGAGATATTTACTTGGCATTTAATGCACACCACTTCTCCATCAAAACAGCAATACCTTCACCACCACGAAATAGAAGTTGGTACCGAGTG : GTCGAAGACAAAGTGTTGTATTATATCCTCATGTTAAC</gDNA_template>
            <first_frame> Q  R  F  S  S  P  K  *  G  P  M  I  R  G  P  P  Q  I  V  Q  K  C  T  T  G  I  V  T  V  N  R  T  N  I  V  Q  R  T  H  R  H  D  L  R  Q  L  S  R  R  D  S  L  R  L  F  S  S  D  H  R  I  L  K  F  C  T  S  E  E  A  L  L  P  R  L  V  A  A  A  K  L  Q  :  E  E  A  P  Q  M  L  D  T  L  P  S  F  E  V  S  P  G  L  T  H  P  L  G  V  S  E  I  E  S  G  I  N  F  A  I  F  S  Q  H  A  S  A  V  T  L  C  I  I  L  P  K  S :   V  H  D  G  M  I  E  L  A  L  D  P  Q  K  N  R  T  G  D  I  W  H  I  C  I  K  :  E  L  P  R  G  G  V  L  Y  G  Y  R  I  D  G  P  R  N  W  H  E  G  H  R  F  D  D  S  I  I  L  I  D  P  Y  A  K  L  I  E  G  R  R  A  F  G  D  E  S  N  K  M  C  R  F  F  G  T  Y  D  F  N  S  L  P  F  D  W  G  E  N  Y  K  L  P  N  V  P  E  :  K  D  L  V  I  Y  E  M  N  V  R  A  F  T  A  D  E  T  S  S  L  D  Q  D  Q  R  G  S  Y  L  G  L  I  E  K  :  I  P  H  L  L  E  L  G  V  N  T  V  E  L  L  P  V  F  E  F  D  E  L  E  L  Q  R  R  P  N  P  R  D  H  M  :  V  Y  Y  M  V  D  L  N  N  N  A  Q  L  L  N  F  S  G  C   : G  N  T  F  N  C  N  H  P  T  V  M  E  L  I  L  E  S  L  R  H  W :   V  T  E  Y  H  V  D  G  F  R  F  D  L  A  S  V  L  C  R  G  T  D  G  T  P  I  N  A  P  P  L  V  K  :  A  I  S  R  D  S  V  L  S  R  C  K  I  I  A  E  P  W  D  C  G  G  L  Y  L  V  G  K  F  P  N  W  D  R :   W  A  E  W  N  G  K  Y  R  D  D  I  R  R  F  I  K  :  G  D  A  G  M  K  G  N  F  A  T  R  I  A  G  S  A  D  L  Y  R  :  V  N  K  R  K  P  Y  H  S  V  N  F  V  I  A  H  D  G  F  T  L  Y  D  L  V  S  Y  N  N  K  :  H  N  D  A  N  G  E  G  G  N  D  G  C  N  D  N  F  S  W  N  C  G  I  E   : G  E  T  S  D  A  N  V  N  E  L  R  S  R  Q  M  K  N  F  H  L  A  L  M  V  S  Q  :  G  T  P  M  M  L  M  G  D  E  Y  G  H  T  R  Y  G  N  N  N  S  Y  G  H  D  T  A  I  N  N  F  Q  W  G  Q  :  L  E  A  R  R  N  D  H  F  R  F  F  S  K  M  I  K  F  R  L  S  H  N  V  L  R  K  E  N  F  I  E  K  :  N  D  I  T  W  L  E  D  N  W  Y  N  E  E  S  R  F  L  A  F  M :   L  H  D  G  N  G  G  D  I  Y  L  A  F  N  A  H  H  F  S  I  K  T  A  I  P  S  P  P  R  N  R  S  W  Y  R  V  :  V  E  D  K  V  L  Y  Y  I  L  M  L   </first_frame>
            <second_frame>  N  D  S  L  L  Q  N  R  A  R  *  *  E  D  H  H  K  S  S  R  N  V  P  P  A  L  *  L  L  T  G  P  I  *  F  N  E  L  T  V  T  I  S  G  S  L  A  G  V  I  V  *  G  S  S  P  L  T  T  G  F  *  S  F  V  H  R  R  R  R  S  Y  L  G  W  W  Q  Q  L  S  F  R :   K  K  L  L  K  C  W  T  L  Y  L  H  S  K  F  P  L  V  *  L  I  H  *  E  Y  Q  K  L  K  V  E  *  I  L  Q  F  F  R  S  M  L  L  Q  L  H  F  A  *  F  F  Q  R   : V  F  M  M  E  *  L  N  *  H  W  I  H  R  R  T  A  P  E  T  Y  G  T  Y  A  L  R :   S  C  P  E  V  G  S  F  M  V  I  A  L  M  D  L  E  I  G  M  K  G  I  D  L  T  I  A  L  F  *  L  I  L  T  Q  N  *  L  K  V  D  E  L  L  E  M  K  A  I  K  C  V  D  F  L  E  L  M  I  S  I  A  C  L  L  T  G  E  K  I  T  S  F  Q  M  Y  R  R :   K  I  L  L  Y  M  R  *  M  F  V  L  L  L  L  M  K  Q  V  V  W  I  K  I  N  G  E  V  T  L  A  *  L  K  R :   Y  H  I  F  S  S  L  V  S  I  Q  *  N  Y  C  L  F  L  S  L  M  N  W  N  Y  K  G  D  L  I  R  E  I  T  W :   F  I  T  W  *  I  *  T  T  M  L  S  C  *  I  S  L  D  V  :  V  I  L  L  T  A  T  I  L  P  S  W  N  L  Y  L  K  A  *  D  T   : G  S  P  S  I  M  S  M  D  F  A  L  I  L  L  V  F  F  A  E  G  Q  M  V  L  P  L  M  L  P  P  W  L  R :   P  F  P  E  I  V  Y  C  R  G  A  K  L  L  L  S  H  G  I  V  E  A  Y  I  L  L  G  S  F  R  T  G  T   : G  G  L  S  G  T  G  S  T  V  M  T  S  E  D  L  *  R :   A  M  L  A  *  K  E  I  L  Q  P  V  S  Q  V  Q  Q  I  C  T  E :   *  T  S  E  N  L  T  T  V  S  T  S  *  L  P  M  M  A  L  L  C  M  T  L  F  H  T  I  I  S :   T  M  M  R  M  V  K  V  A  M  M  D  A  M  T  I  S  V  G  I  V  V  L  K  :  V  K  L  Q  M  Q  M  L  T  N  C  V  H  G  K  *  K  I  F  I  W  H  *  W  F  L  R :   E  H  Q  *  C  L  W  V  M  S  T  G  I  P  A  M  E  I  I  T  V  M  D  M  I  P  P  S  T  I  S  S  G  D  N :   W  K  Q  G  G  M  I  T  S  G  S  F  P  R  *  *  S  F  D  C  P  I  M  F  *  E  R  K  I  S  L  R  R :   T  T  L  P  G  S  R  T  T  G  T  M  K  R  V  D  S  L  H  L   : C  S  M  M  G  M  E  E  I  F  T  W  H  L  M  H  T  T  S  P  S  K  Q  Q  Y  L  H  H  H  E  I  E  V  G  T  E  W :   S  K  T  K  C  C  I  I  S  S  C  *  </second_frame>
            <third_frame>   T  I  L  F  S  K  I  G  P  D  D  K  R  T  T  T  N  R  P  E  M  Y  H  R  H  C  N  C  *  P  D  Q  Y  S  S  T  N  S  P  S  R  S  P  A  A  *  P  A  *  *  S  K  A  L  L  L  *  P  P  D  S  E  V  L  Y  I  G  G  G  A  P  T  *  V  G  G  S  S  *  A  S   : G  R  S  S  S  N  A  G  H  F  T  F  I  R  S  F  P  W  S  D  S  S  T  R  S  I  R  N  *  K  W  N  K  F  C  N  F  F  A  A  C  F  C  S  Y  T  L  H  N  S  S  K  E  :  C  S  *  W  N  D  *  I  S  I  G  S  T  E  E  P  H  R  R  H  M  A  H  M  H  *   : G  V  A  P  R  W  G  P  L  W  L  S  H  *  W  T  S  K  L  A  *  R  A  S  I  *  R  *  H  Y  F  D  *  S  L  R  K  T  N  *  R  S  T  S  F  W  R  *  K  Q  *  N  V  *  I  F  W  N  L  *  F  Q  *  L  A  F  *  L  G  R  K  L  Q  A  S  K  C  T  G   : E  R  S  C  Y  I  *  D  E  C  S  C  F  Y  C  *  *  N  K  *  F  G  S  R  S  T  G  K  L  P  W  L  N  *  K   : D  T  T  S  S  R  A  W  C  Q  Y  S  R  I  I  A  C  F  *  V  *  *  T  G  I  T  K  A  T  *  S  E  R  S  H   : G  L  L  H  G  R  F  E  Q  Q  C  S  A  A  E  F  L  W  M  W :   *  Y  F  *  L  Q  P  S  Y  R  H  G  T  Y  T  *  K  L  K  T  L  :  G  H  R  V  S  C  R  W  I  S  L  *  S  C  *  C  S  L  Q  R  D  R  W  Y  S  H  *  C  S  P  L  G  *   : G  H  F  Q  R  *  C  I  V  E  V  Q  N  Y  C  *  A  M  G  L  W  R  P  I  S  C  W  E  V  S  E  L  G  P  :  V  G  *  V  E  R  E  V  P  *  *  H  Q  K  I  Y  K   : G  R  C  W  H  E  R  K  F  C  N  P  Y  R  R  F  S  R  S  V  Q   : S  E  Q  A  K  T  L  P  Q  C  Q  L  R  D  C  P  *  W  L  Y  F  V  *  P  C  F  I  Q  *  *   : A  Q  *  C  E  W  *  R  W  Q  *  W  M  Q  *  Q  F  Q  L  E  L  W  Y  *  R :   *  N  F  R  C  K  C  *  R  T  A  F  T  A  N  E  K  F  S  F  G  T  D  G  F  S   : G  N  T  N  D  A  Y  G  *  *  V  R  A  Y  P  L  W  K  *  *  Q  L  W  T  *  Y  R  H  Q  Q  F  P  V  G  T   : I  G  S  K  E  E  *  S  L  Q  V  L  F  Q  D  D  K  V  S  T  V  P  *  C  S  K  K  G  K  F  H  *  E   : E  R  H  Y  L  A  R  G  Q  L  V  Q  *  R  E  *  I  P  C  I  Y  :  A  P  *  W  E  W  R  R  Y  L  L  G  I  *  C  T  P  L  L  H  Q  N  S  N  T  F  T  T  T  K  *  K  L  V  P  S   : G  R  R  Q  S  V  V  L  Y  P  H  V  N </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06SLm0022H01.1" strand="-"/>
                <serials PGL_serial="1" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="60336" stop="60115"/>
                    <exon start="58521" stop="58364"/>
                    <exon start="56929" stop="56851"/>
                    <exon start="55007" stop="54771"/>
                    <exon start="54062" stop="53958"/>
                    <exon start="53658" stop="53554"/>
                    <exon start="47196" stop="47139"/>
                    <exon start="45770" stop="45707"/>
                    <exon start="44813" stop="44714"/>
                    <exon start="44371" stop="44271"/>
                    <exon start="42438" stop="42387"/>
                    <exon start="41386" stop="41324"/>
                    <exon start="40219" stop="40130"/>
                    <exon start="40046" stop="39974"/>
                    <exon start="38022" stop="37943"/>
                    <exon start="37449" stop="37345"/>
                    <exon start="37270" stop="37172"/>
                    <exon start="36339" stop="36278"/>
                    <exon start="35280" stop="35172"/>
                    <exon start="34956" stop="34921"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1998</number_coding_nucleotides>
                  <number_encoded_amino_acids>666</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GPMIRGPPQIVQKCTTGIVTVNRTNIVQRTHRHDLRQLSRRDSLRLFSSDHRILKFCTSEEALLPRLVAAAKLQEEAPQMLDTLPSFEVSPGLTHPLGVSEIESGINFAIFSQHASAVTLCIILPKSVHDGMIELALDPQKNRTGDIWHICIKELPRGGVLYGYRIDGPRNWHEGHRFDDSIILIDPYAKLIEGRRAFGDESNKMCRFFGTYDFNSLPFDWGENYKLPNVPEKDLVIYEMNVRAFTADETSSLDQDQRGSYLGLIEKIPHLLELGVNTVELLPVFEFDELELQRRPNPRDHMVYYMVDLNNNAQLLNFSGCGNTFNCNHPTVMELILESLRHWVTEYHVDGFRFDLASVLCRGTDGTPINAPPLVKAISRDSVLSRCKIIAEPWDCGGLYLVGKFPNWDRWAEWNGKYRDDIRRFIKGDAGMKGNFATRIAGSADLYRVNKRKPYHSVNFVIAHDGFTLYDLVSYNNKHNDANGEGGNDGCNDNFSWNCGIEGETSDANVNELRSRQMKNFHLALMVSQGTPMMLMGDEYGHTRYGNNNSYGHDTAINNFQWGQLEARRNDHFRFFSKMIKFRLSHNVLRKENFIEKNDITWLEDNWYNEESRFLAFMLHDGNGGDIYLAFNAHHFSIKTAIPSPPRNRSWYRVVEDKVLYYILML</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="45770" e_stop="45707"/>
            <exon e_start="44756" e_stop="44714"/>
            <exon e_start="44371" e_stop="44271"/>
            <exon e_start="42438" e_stop="42387"/>
            <exon e_start="41386" e_stop="41324"/>
            <exon e_start="40219" e_stop="40130"/>
            <exon e_start="40046" e_stop="39974"/>
            <exon e_start="38022" e_stop="37943"/>
            <exon e_start="37449" e_stop="37345"/>
            <exon e_start="37270" e_stop="37172"/>
            <exon e_start="36339" e_stop="36278"/>
            <exon e_start="35280" e_stop="35172"/>
            <exon e_start="34956" e_stop="34919"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.957" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.767" acc_prob="0.615" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.959" acc_prob="0.969" e_score="1.000"/>
          <exon-intron don_prob="0.545" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.969" acc_prob="0.991" e_score="1.000"/>
          <exon-intron don_prob="0.982" acc_prob="0.983" e_score="1.000"/>
          <exon-intron don_prob="0.443" acc_prob="0.966" e_score="1.000"/>
          <exon-intron don_prob="0.884" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.968" acc_prob="0.713" e_score="1.000"/>
          <exon-intron don_prob="0.980" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.811" e_score="1.000"/>
          <exon-only e_score="0.474"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="45770" e_stop="45707" e_length="64"/>
          </exon>
          <intron i_serial="1" don_prob="0.957" acc_prob="0.000">
            <gDNA_intron_boundary i_start="45706" i_stop="44757" i_length="950"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="44756" e_stop="44714" e_length="43"/>
          </exon>
          <intron i_serial="2" don_prob="0.767" acc_prob="0.615">
            <gDNA_intron_boundary i_start="44713" i_stop="44372" i_length="342"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="44371" e_stop="44271" e_length="101"/>
          </exon>
          <intron i_serial="3" don_prob="0.996" acc_prob="0.994">
            <gDNA_intron_boundary i_start="44270" i_stop="42439" i_length="1832"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="42438" e_stop="42387" e_length="52"/>
          </exon>
          <intron i_serial="4" don_prob="0.959" acc_prob="0.969">
            <gDNA_intron_boundary i_start="42386" i_stop="41387" i_length="1000"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="41386" e_stop="41324" e_length="63"/>
          </exon>
          <intron i_serial="5" don_prob="0.545" acc_prob="0.996">
            <gDNA_intron_boundary i_start="41323" i_stop="40220" i_length="1104"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="40219" e_stop="40130" e_length="90"/>
          </exon>
          <intron i_serial="6" don_prob="0.969" acc_prob="0.991">
            <gDNA_intron_boundary i_start="40129" i_stop="40047" i_length="83"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="40046" e_stop="39974" e_length="73"/>
          </exon>
          <intron i_serial="7" don_prob="0.982" acc_prob="0.983">
            <gDNA_intron_boundary i_start="39973" i_stop="38023" i_length="1951"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="38022" e_stop="37943" e_length="80"/>
          </exon>
          <intron i_serial="8" don_prob="0.443" acc_prob="0.966">
            <gDNA_intron_boundary i_start="37942" i_stop="37450" i_length="493"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="37449" e_stop="37345" e_length="105"/>
          </exon>
          <intron i_serial="9" don_prob="0.884" acc_prob="0.000">
            <gDNA_intron_boundary i_start="37344" i_stop="37271" i_length="74"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="37270" e_stop="37172" e_length="99"/>
          </exon>
          <intron i_serial="10" don_prob="0.968" acc_prob="0.713">
            <gDNA_intron_boundary i_start="37171" i_stop="36340" i_length="832"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="36339" e_stop="36278" e_length="62"/>
          </exon>
          <intron i_serial="11" don_prob="0.980" acc_prob="0.994">
            <gDNA_intron_boundary i_start="36277" i_stop="35281" i_length="997"/>
          </intron>
          <exon e_serial="12" e_score="1.000">
            <gDNA_exon_boundary e_start="35280" e_stop="35172" e_length="109"/>
          </exon>
          <intron i_serial="12" don_prob="0.999" acc_prob="0.811">
            <gDNA_intron_boundary i_start="35171" i_stop="34957" i_length="215"/>
          </intron>
          <exon e_serial="13" e_score="0.474">
            <gDNA_exon_boundary e_start="34956" e_stop="34919" e_length="38"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="45770" stop="45707"/>
              <exon start="44756" stop="44714"/>
              <exon start="44371" stop="44271"/>
              <exon start="42438" stop="42387"/>
              <exon start="41386" stop="41324"/>
              <exon start="40219" stop="40130"/>
              <exon start="40046" stop="39974"/>
              <exon start="38022" stop="37943"/>
              <exon start="37449" stop="37345"/>
              <exon start="37270" stop="37172"/>
              <exon start="36339" stop="36302"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E707768" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44288" stop="44271"/>
              <exon start="42438" stop="42387"/>
              <exon start="41386" stop="41324"/>
              <exon start="40219" stop="40130"/>
              <exon start="40046" stop="39974"/>
              <exon start="38022" stop="37943"/>
              <exon start="37449" stop="37345"/>
              <exon start="37270" stop="37248"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E237532" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="41386" stop="41324"/>
              <exon start="40219" stop="40130"/>
              <exon start="40046" stop="39974"/>
              <exon start="38022" stop="37943"/>
              <exon start="37449" stop="37345"/>
              <exon start="37270" stop="37172"/>
              <exon start="36339" stop="36278"/>
              <exon start="35280" stop="35172"/>
              <exon start="34956" stop="34919"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E423884" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="41386" stop="41324"/>
              <exon start="40219" stop="40130"/>
              <exon start="40046" stop="39974"/>
              <exon start="38022" stop="37943"/>
              <exon start="37449" stop="37345"/>
              <exon start="37270" stop="37172"/>
              <exon start="36339" stop="36278"/>
              <exon start="35280" stop="35172"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E451254" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="3" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GTAATACTTTTAACTGCAACCATCCTACCGTCATGGAACTTATACTTGAAAGCTTAAGACACTG : AGGGACAGATGGTACTCCCATTAATGCTCCCCCCTTGGTTAAG : GCCATTTCCAGAGATAGTGTATTGTCGAGGTGCAAAATTATTGCTGAGCCATGGGATTGTGGAGGCCTATATCTTGTTGGGAAGTTTCCGAACTGGGACCG : GTGGGCTGAGTGGAACGGGAAGTACCGTGATGACATCAGAAGATTTATAAAG : GGCGATGCTGGCATGAAAGGAAATTTTGCAACCCGTATCGCAGGTTCAGCAGATCTGTACAGA : GTGAACAAGCGAAAACCTTACCACAGTGTCAACTTCGTGATTGCCCATGATGGCTTTACTTTGTATGACCTTGTTTCATACAATAATAAG : CACAATGATGCGAATGGTGAAGGTGGCAATGATGGATGCAATGACAATTTCAGTTGGAATTGTGGTATTGAAG : GTGAAACTTCAGATGCAAATGTTAACGAACTGCGTTCACGGCAAATGAAAAATTTTCATTTGGCACTGATGGTTTCTCAG : GGAACACCAATGATGCTTATGGGTGATGAGTACGGGCATACCCGCTATGGAAATAATAACAGTTATGGACATGATACCGCCATCAACAATTTCCAGTGGGGACAA : TTGGAAGCAAGGAGGAATGATCACTTCAGGTTCTTTTCCAAGATGATAAAGTTTCGACTGTCCCATAATGTTCTAAGAAAGGAAAATTTCATTGAGAAG : AACGACATTACCTGGCTCGAGGACAACTGGTACAATGAAGAGAGTAGATTCCTTGCATTTAT : GCTCCATGATGGGAATGGAGGAGATATTTACTTGGCATTTAATGCACACCACTTCTCCATCAAAACAGCAATACCTTCACCACCACGAAATAGAAGTTGGTACCGAGTG : GTCGAAGACAAAGTGTTGTATTATATCCTCATGTTAAC</gDNA_template>
            <first_frame> V  I  L  L  T  A  T  I  L  P  S  W  N  L  Y  L  K  A  *  D  T   : E  G  Q  M  V  L  P  L  M  L  P  P  W  L  R :   P  F  P  E  I  V  Y  C  R  G  A  K  L  L  L  S  H  G  I  V  E  A  Y  I  L  L  G  S  F  R  T  G  T   : G  G  L  S  G  T  G  S  T  V  M  T  S  E  D  L  *  R :   A  M  L  A  *  K  E  I  L  Q  P  V  S  Q  V  Q  Q  I  C  T  E :   *  T  S  E  N  L  T  T  V  S  T  S  *  L  P  M  M  A  L  L  C  M  T  L  F  H  T  I  I  S :   T  M  M  R  M  V  K  V  A  M  M  D  A  M  T  I  S  V  G  I  V  V  L  K  :  V  K  L  Q  M  Q  M  L  T  N  C  V  H  G  K  *  K  I  F  I  W  H  *  W  F  L  R :   E  H  Q  *  C  L  W  V  M  S  T  G  I  P  A  M  E  I  I  T  V  M  D  M  I  P  P  S  T  I  S  S  G  D  N :   W  K  Q  G  G  M  I  T  S  G  S  F  P  R  *  *  S  F  D  C  P  I  M  F  *  E  R  K  I  S  L  R  R :   T  T  L  P  G  S  R  T  T  G  T  M  K  R  V  D  S  L  H  L   : C  S  M  M  G  M  E  E  I  F  T  W  H  L  M  H  T  T  S  P  S  K  Q  Q  Y  L  H  H  H  E  I  E  V  G  T  E  W :   S  K  T  K  C  C  I  I  S  S  C  *  </first_frame>
            <second_frame>  *  Y  F  *  L  Q  P  S  Y  R  H  G  T  Y  T  *  K  L  K  T  L  :  R  D  R  W  Y  S  H  *  C  S  P  L  G  *   : G  H  F  Q  R  *  C  I  V  E  V  Q  N  Y  C  *  A  M  G  L  W  R  P  I  S  C  W  E  V  S  E  L  G  P  :  V  G  *  V  E  R  E  V  P  *  *  H  Q  K  I  Y  K   : G  R  C  W  H  E  R  K  F  C  N  P  Y  R  R  F  S  R  S  V  Q   : S  E  Q  A  K  T  L  P  Q  C  Q  L  R  D  C  P  *  W  L  Y  F  V  *  P  C  F  I  Q  *  *   : A  Q  *  C  E  W  *  R  W  Q  *  W  M  Q  *  Q  F  Q  L  E  L  W  Y  *  R :   *  N  F  R  C  K  C  *  R  T  A  F  T  A  N  E  K  F  S  F  G  T  D  G  F  S   : G  N  T  N  D  A  Y  G  *  *  V  R  A  Y  P  L  W  K  *  *  Q  L  W  T  *  Y  R  H  Q  Q  F  P  V  G  T   : I  G  S  K  E  E  *  S  L  Q  V  L  F  Q  D  D  K  V  S  T  V  P  *  C  S  K  K  G  K  F  H  *  E   : E  R  H  Y  L  A  R  G  Q  L  V  Q  *  R  E  *  I  P  C  I  Y  :  A  P  *  W  E  W  R  R  Y  L  L  G  I  *  C  T  P  L  L  H  Q  N  S  N  T  F  T  T  T  K  *  K  L  V  P  S   : G  R  R  Q  S  V  V  L  Y  P  H  V  N </second_frame>
            <third_frame>   N  T  F  N  C  N  H  P  T  V  M  E  L  I  L  E  S  L  R  H  * :   G  T  D  G  T  P  I  N  A  P  P  L  V  K  :  A  I  S  R  D  S  V  L  S  R  C  K  I  I  A  E  P  W  D  C  G  G  L  Y  L  V  G  K  F  P  N  W  D  R :   W  A  E  W  N  G  K  Y  R  D  D  I  R  R  F  I  K  :  G  D  A  G  M  K  G  N  F  A  T  R  I  A  G  S  A  D  L  Y  R  :  V  N  K  R  K  P  Y  H  S  V  N  F  V  I  A  H  D  G  F  T  L  Y  D  L  V  S  Y  N  N  K  :  H  N  D  A  N  G  E  G  G  N  D  G  C  N  D  N  F  S  W  N  C  G  I  E   : G  E  T  S  D  A  N  V  N  E  L  R  S  R  Q  M  K  N  F  H  L  A  L  M  V  S  Q  :  G  T  P  M  M  L  M  G  D  E  Y  G  H  T  R  Y  G  N  N  N  S  Y  G  H  D  T  A  I  N  N  F  Q  W  G  Q  :  L  E  A  R  R  N  D  H  F  R  F  F  S  K  M  I  K  F  R  L  S  H  N  V  L  R  K  E  N  F  I  E  K  :  N  D  I  T  W  L  E  D  N  W  Y  N  E  E  S  R  F  L  A  F  M :   L  H  D  G  N  G  G  D  I  Y  L  A  F  N  A  H  H  F  S  I  K  T  A  I  P  S  P  P  R  N  R  S  W  Y  R  V  :  V  E  D  K  V  L  Y  Y  I  L  M  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06SLm0022H01.1" strand="-"/>
                <serials PGL_serial="1" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="44755" stop="44714"/>
                    <exon start="44371" stop="44271"/>
                    <exon start="42438" stop="42387"/>
                    <exon start="41386" stop="41324"/>
                    <exon start="40219" stop="40130"/>
                    <exon start="40046" stop="39974"/>
                    <exon start="38022" stop="37943"/>
                    <exon start="37449" stop="37345"/>
                    <exon start="37270" stop="37172"/>
                    <exon start="36339" stop="36278"/>
                    <exon start="35280" stop="35172"/>
                    <exon start="34956" stop="34921"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>912</number_coding_nucleotides>
                  <number_encoded_amino_acids>304</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GTDGTPINAPPLVKAISRDSVLSRCKIIAEPWDCGGLYLVGKFPNWDRWAEWNGKYRDDIRRFIKGDAGMKGNFATRIAGSADLYRVNKRKPYHSVNFVIAHDGFTLYDLVSYNNKHNDANGEGGNDGCNDNFSWNCGIEGETSDANVNELRSRQMKNFHLALMVSQGTPMMLMGDEYGHTRYGNNNSYGHDTAINNFQWGQLEARRNDHFRFFSKMIKFRLSHNVLRKENFIEKNDITWLEDNWYNEESRFLAFMLHDGNGGDIYLAFNAHHFSIKTAIPSPPRNRSWYRVVEDKVLYYILML</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="+" PGL_start="23580" PGL_stop="24695"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="23580" e_stop="23674"/>
            <exon e_start="24079" e_stop="24695"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="1.000" e_score="0.779"/>
          <exon-only e_score="0.950"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.779">
            <gDNA_exon_boundary e_start="23580" e_stop="23674" e_length="95"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="1.000">
            <gDNA_intron_boundary i_start="23675" i_stop="24078" i_length="404"/>
          </intron>
          <exon e_serial="2" e_score="0.950">
            <gDNA_exon_boundary e_start="24079" e_stop="24695" e_length="617"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23580" stop="23674"/>
              <exon start="24079" stop="24695"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E543257" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CACTGCCAGTCGTCAATCGCCGCCCGCCGGCTCTCCACAGGCCCACAACCACCCCTCTCATTCATCTCAACTCTCATCTCTCGTTTTCGTCACTC : ATGGCACAAACTGGAAGTAAGGGAAGTGAAAGTGGAGCTTCAAATGAGAACATACCTTATACCTCATCTCCAAGTGAGGTTGAAGTTGATGTTGATACTTCAAAGAAAAGAAAAATCATGGAACCTAGAGCTAATTGTTGGAAGCATTTTGAAAAGTTCACTGATGAAAATGAAGGTAGTAAAGCCAAATGCAAGTATTGTGCAAAAGCTTATACAGCTTCTACATCATCTAATGGTACGTCATCAATGAATACTCATTTGAGAACATGTCCTAAATTTCCTCGTGACACCGTAGATAAAGGTCGAAATCTAATTAATTTTCTACCATCTTCAACGGGATCAAAAGAAGGGGTCATTAGCACTTGGAAATTTGACCAAGCACAAAGTAGGAAAGCTTTAGCCAAAATGATAATTGTTGACGAACTACCATTTAGTTTTGTTGAGAGAGAGGGGTTTAAAAACTTCATGAGAGTTACAATGCTGCAATTTCATATTCCTTCTCGTCGAACTATGATGAGAGATTGTTATGAATTATACCTTGAAGAAAAAAAACTTTTGAAGAAGGTTTTCAAAGAAGCACGTCCAAAAGTTTGTCTTACAACAGATACTTGGACCTC</gDNA_template>
            <first_frame> H  C  Q  S  S  I  A  A  R  R  L  S  T  G  P  Q  P  P  L  S  F  I  S  T  L  I  S  R  F  R  H  S :   W  H  K  L  E  V  R  E  V  K  V  E  L  Q  M  R  T  Y  L  I  P  H  L  Q  V  R  L  K  L  M  L  I  L  Q  R  K  E  K  S  W  N  L  E  L  I  V  G  S  I  L  K  S  S  L  M  K  M  K  V  V  K  P  N  A  S  I  V  Q  K  L  I  Q  L  L  H  H  L  M  V  R  H  Q  *  I  L  I  *  E  H  V  L  N  F  L  V  T  P  *  I  K  V  E  I  *  L  I  F  Y  H  L  Q  R  D  Q  K  K  G  S  L  A  L  G  N  L  T  K  H  K  V  G  K  L  *  P  K  *  *  L  L  T  N  Y  H  L  V  L  L  R  E  R  G  L  K  T  S  *  E  L  Q  C  C  N  F  I  F  L  L  V  E  L  *  *  E  I  V  M  N  Y  T  L  K  K  K  N  F  *  R  R  F  S  K  K  H  V  Q  K  F  V  L  Q  Q  I  L  G  P  </first_frame>
            <second_frame>  T  A  S  R  Q  S  P  P  A  G  S  P  Q  A  H  N  H  P  S  H  S  S  Q  L  S  S  L  V  F  V  T   : H  G  T  N  W  K  *  G  K  *  K  W  S  F  K  *  E  H  T  L  Y  L  I  S  K  *  G  *  S  *  C  *  Y  F  K  E  K  K  N  H  G  T  *  S  *  L  L  E  A  F  *  K  V  H  *  *  K  *  R  *  *  S  Q  M  Q  V  L  C  K  S  L  Y  S  F  Y  I  I  *  W  Y  V  I  N  E  Y  S  F  E  N  M  S  *  I  S  S  *  H  R  R  *  R  S  K  S  N  *  F  S  T  I  F  N  G  I  K  R  R  G  H  *  H  L  E  I  *  P  S  T  K  *  E  S  F  S  Q  N  D  N  C  *  R  T  T  I  *  F  C  *  E  R  G  V  *  K  L  H  E  S  Y  N  A  A  I  S  Y  S  F  S  S  N  Y  D  E  R  L  L  *  I  I  P  *  R  K  K  T  F  E  E  G  F  Q  R  S  T  S  K  S  L  S  Y  N  R  Y  L  D  L </second_frame>
            <third_frame>   L  P  V  V  N  R  R  P  P  A  L  H  R  P  T  T  T  P  L  I  H  L  N  S  H  L  S  F  S  S  L  :  M  A  Q  T  G  S  K  G  S  E  S  G  A  S  N  E  N  I  P  Y  T  S  S  P  S  E  V  E  V  D  V  D  T  S  K  K  R  K  I  M  E  P  R  A  N  C  W  K  H  F  E  K  F  T  D  E  N  E  G  S  K  A  K  C  K  Y  C  A  K  A  Y  T  A  S  T  S  S  N  G  T  S  S  M  N  T  H  L  R  T  C  P  K  F  P  R  D  T  V  D  K  G  R  N  L  I  N  F  L  P  S  S  T  G  S  K  E  G  V  I  S  T  W  K  F  D  Q  A  Q  S  R  K  A  L  A  K  M  I  I  V  D  E  L  P  F  S  F  V  E  R  E  G  F  K  N  F  M  R  V  T  M  L  Q  F  H  I  P  S  R  R  T  M  M  R  D  C  Y  E  L  Y  L  E  E  K  K  L  L  K  K  V  F  K  E  A  R  P  K  V  C  L  T  T  D  T  W  T   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06SLm0022H01.1" strand="+"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="23582" stop="23674"/>
                    <exon start="24079" stop="24693"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>708</number_coding_nucleotides>
                  <number_encoded_amino_acids>236</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LPVVNRRPPALHRPTTTPLIHLNSHLSFSSLMAQTGSKGSESGASNENIPYTSSPSEVEVDVDTSKKRKIMEPRANCWKHFEKFTDENEGSKAKCKYCAKAYTASTSSNGTSSMNTHLRTCPKFPRDTVDKGRNLINFLPSSTGSKEGVISTWKFDQAQSRKALAKMIIVDELPFSFVEREGFKNFMRVTMLQFHIPSRRTMMRDCYELYLEEKKLLKKVFKEARPKVCLTTDTWT</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="+" PGL_start="25723" PGL_stop="26710"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="25723" e_stop="26211"/>
            <exon e_start="26288" e_stop="26377"/>
            <exon e_start="26475" e_stop="26710"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.827" e_score="0.965"/>
          <exon-intron don_prob="0.991" acc_prob="0.828" e_score="0.978"/>
          <exon-only e_score="0.903"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.965">
            <gDNA_exon_boundary e_start="25723" e_stop="26211" e_length="489"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.827">
            <gDNA_intron_boundary i_start="26212" i_stop="26287" i_length="76"/>
          </intron>
          <exon e_serial="2" e_score="0.978">
            <gDNA_exon_boundary e_start="26288" e_stop="26377" e_length="90"/>
          </exon>
          <intron i_serial="2" don_prob="0.991" acc_prob="0.828">
            <gDNA_intron_boundary i_start="26378" i_stop="26474" i_length="97"/>
          </intron>
          <exon e_serial="3" e_score="0.903">
            <gDNA_exon_boundary e_start="26475" e_stop="26710" e_length="236"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25723" stop="26211"/>
              <exon start="26288" stop="26377"/>
              <exon start="26475" stop="26669"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E543256" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25941" stop="26211"/>
              <exon start="26288" stop="26377"/>
              <exon start="26475" stop="26710"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E299669" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAGAAATCCCCAAAAAGCTCTTTACATGTACCATCTTCACCCACTTCGTCTGACAATTCATCAAGTATATCTAGTGTGAGTGGTTGTGGCAACTTTGCAAATAGAGGAAGATTGAGAACGAAACAACAATTTGAGAAGCATAAAGAAGTTAGTGGAAGTTCAGGTAATAAATCAGAATTGGAAAGATATCTTGCGGAAGATATTGAGTCAGATAGTGATGACTTTGATATATTAATGTGGTGGAAAGTTAATGAGTCGAGATTTCCTATTCTCGCGGAGATGGTTCGTGATGTGTTAGCCATTCCCATTTCAAGTGTCGCATCGGAATGTGCATTCAGCACAGGAGGTCGTGTTCTTGATCCCTTTAGGAGTTCATTAACTCCTAAAATTGTGCAATCTCTTATTTGTGTTCAAGATTGGCTTACAAGTGAGTCTTTTCCAATCAATATTGAGGAAGATTTAGAGTATCTTGAACTTGGTAAGAATTTG : ATTTTGCTTGTAGTGGGACTGAATCTAGTATAATTGATATATAGTTGCAGCTTGTAAGTTCAACTATCAACTAGTGATGTGCGGTAACGA : GTCCATCAATGTTTTGTTATTTTCTTGGTTGCTATATGCTAGAACATGGGAGCTATTGCAATGGAGGTTGCAAGTTGCAACGATGTTTTGTTTGTTTTCTAAATCTCTTTGTTGCTGGAAGTTTTAATGAGACAGATAATGATGACTTTAGTTTGTAACTAACTCTATTTTAGTGATGGACACAAGTTTGTTGAAATTTCTTTCTAGTGTTGTTGTGATGTTGTCTTGAGTCTTGA</gDNA_template>
            <first_frame> K  K  S  P  K  S  S  L  H  V  P  S  S  P  T  S  S  D  N  S  S  S  I  S  S  V  S  G  C  G  N  F  A  N  R  G  R  L  R  T  K  Q  Q  F  E  K  H  K  E  V  S  G  S  S  G  N  K  S  E  L  E  R  Y  L  A  E  D  I  E  S  D  S  D  D  F  D  I  L  M  W  W  K  V  N  E  S  R  F  P  I  L  A  E  M  V  R  D  V  L  A  I  P  I  S  S  V  A  S  E  C  A  F  S  T  G  G  R  V  L  D  P  F  R  S  S  L  T  P  K  I  V  Q  S  L  I  C  V  Q  D  W  L  T  S  E  S  F  P  I  N  I  E  E  D  L  E  Y  L  E  L  G  K  N  L  :  I  L  L  V  V  G  L  N  L  V  *  L  I  Y  S  C  S  L  *  V  Q  L  S  T  S  D  V  R  *  R  :  V  H  Q  C  F  V  I  F  L  V  A  I  C  *  N  M  G  A  I  A  M  E  V  A  S  C  N  D  V  L  F  V  F  *  I  S  L  L  L  E  V  L  M  R  Q  I  M  M  T  L  V  C  N  *  L  Y  F  S  D  G  H  K  F  V  E  I  S  F  *  C  C  C  D  V  V  L  S  L   </first_frame>
            <second_frame>  R  N  P  Q  K  A  L  Y  M  Y  H  L  H  P  L  R  L  T  I  H  Q  V  Y  L  V  *  V  V  V  A  T  L  Q  I  E  E  D  *  E  R  N  N  N  L  R  S  I  K  K  L  V  E  V  Q  V  I  N  Q  N  W  K  D  I  L  R  K  I  L  S  Q  I  V  M  T  L  I  Y  *  C  G  G  K  L  M  S  R  D  F  L  F  S  R  R  W  F  V  M  C  *  P  F  P  F  Q  V  S  H  R  N  V  H  S  A  Q  E  V  V  F  L  I  P  L  G  V  H  *  L  L  K  L  C  N  L  L  F  V  F  K  I  G  L  Q  V  S  L  F  Q  S  I  L  R  K  I  *  S  I  L  N  L  V  R  I  * :   F  C  L  *  W  D  *  I  *  Y  N  *  Y  I  V  A  A  C  K  F  N  Y  Q  L  V  M  C  G  N  E :   S  I  N  V  L  L  F  S  W  L  L  Y  A  R  T  W  E  L  L  Q  W  R  L  Q  V  A  T  M  F  C  L  F  S  K  S  L  C  C  W  K  F  *  *  D  R  *  *  *  L  *  F  V  T  N  S  I  L  V  M  D  T  S  L  L  K  F  L  S  S  V  V  V  M  L  S  *  V  L  </second_frame>
            <third_frame>   E  I  P  K  K  L  F  T  C  T  I  F  T  H  F  V  *  Q  F  I  K  Y  I  *  C  E  W  L  W  Q  L  C  K  *  R  K  I  E  N  E  T  T  I  *  E  A  *  R  S  *  W  K  F  R  *  *  I  R  I  G  K  I  S  C  G  R  Y  *  V  R  *  *  *  L  *  Y  I  N  V  V  E  S  *  *  V  E  I  S  Y  S  R  G  D  G  S  *  C  V  S  H  S  H  F  K  C  R  I  G  M  C  I  Q  H  R  R  S  C  S  *  S  L  *  E  F  I  N  S  *  N  C  A  I  S  Y  L  C  S  R  L  A  Y  K  *  V  F  S  N  Q  Y  *  G  R  F  R  V  S  *  T  W  *  E  F   : D  F  A  C  S  G  T  E  S  S  I  I  D  I  *  L  Q  L  V  S  S  T  I  N  *  *  C  A  V  T   : S  P  S  M  F  C  Y  F  L  G  C  Y  M  L  E  H  G  S  Y  C  N  G  G  C  K  L  Q  R  C  F  V  C  F  L  N  L  F  V  A  G  S  F  N  E  T  D  N  D  D  F  S  L  *  L  T  L  F  *  *  W  T  Q  V  C  *  N  F  F  L  V  L  L  *  C  C  L  E  S  * </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06SLm0022H01.1" strand="+"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="25723" stop="26211"/>
                    <exon start="26288" stop="26320"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>519</number_coding_nucleotides>
                  <number_encoded_amino_acids>173</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KKSPKSSLHVPSSPTSSDNSSSISSVSGCGNFANRGRLRTKQQFEKHKEVSGSSGNKSELERYLAEDIESDSDDFDILMWWKVNESRFPILAEMVRDVLAIPISSVASECAFSTGGRVLDPFRSSLTPKIVQSLICVQDWLTSESFPINIEEDLEYLELGKNLILLVVGLNLV*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="-" PGL_start="64975" PGL_stop="62061"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="64975" e_stop="64829"/>
            <exon e_start="63670" e_stop="63548"/>
            <exon e_start="63056" e_stop="62743"/>
            <exon e_start="62564" e_stop="62497"/>
            <exon e_start="62416" e_stop="62061"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.955" e_score="1.000"/>
          <exon-intron don_prob="0.909" acc_prob="0.975" e_score="1.000"/>
          <exon-intron don_prob="0.513" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.924" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="64975" e_stop="64829" e_length="147"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.955">
            <gDNA_intron_boundary i_start="64828" i_stop="63671" i_length="1158"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="63670" e_stop="63548" e_length="123"/>
          </exon>
          <intron i_serial="2" don_prob="0.909" acc_prob="0.975">
            <gDNA_intron_boundary i_start="63547" i_stop="63057" i_length="491"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="63056" e_stop="62743" e_length="314"/>
          </exon>
          <intron i_serial="3" don_prob="0.513" acc_prob="1.000">
            <gDNA_intron_boundary i_start="62742" i_stop="62565" i_length="178"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="62564" e_stop="62497" e_length="68"/>
          </exon>
          <intron i_serial="4" don_prob="1.000" acc_prob="0.924">
            <gDNA_intron_boundary i_start="62496" i_stop="62417" i_length="80"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="62416" e_stop="62061" e_length="356"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64975" stop="64829"/>
              <exon start="63670" stop="63548"/>
              <exon start="63056" stop="62743"/>
              <exon start="62564" stop="62497"/>
              <exon start="62416" stop="62214"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E720735" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64972" stop="64829"/>
              <exon start="63670" stop="63548"/>
              <exon start="63056" stop="62743"/>
              <exon start="62564" stop="62497"/>
              <exon start="62416" stop="62221"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E719519" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64960" stop="64829"/>
              <exon start="63670" stop="63548"/>
              <exon start="63056" stop="62744"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E202989" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64960" stop="64829"/>
              <exon start="63670" stop="63548"/>
              <exon start="63056" stop="62814"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E299345" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64960" stop="64829"/>
              <exon start="63670" stop="63548"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E281571" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64959" stop="64829"/>
              <exon start="63670" stop="63548"/>
              <exon start="63056" stop="62743"/>
              <exon start="62564" stop="62497"/>
              <exon start="62416" stop="62285"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E603821" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64959" stop="64829"/>
              <exon start="63670" stop="63548"/>
              <exon start="63056" stop="62923"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E445426" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64958" stop="64829"/>
              <exon start="63670" stop="63548"/>
              <exon start="63056" stop="62743"/>
              <exon start="62564" stop="62497"/>
              <exon start="62416" stop="62308"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E345183" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64958" stop="64829"/>
              <exon start="63670" stop="63548"/>
              <exon start="63056" stop="62754"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E311036" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64958" stop="64829"/>
              <exon start="63670" stop="63548"/>
              <exon start="63056" stop="62830"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E295680" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64957" stop="64829"/>
              <exon start="63670" stop="63548"/>
              <exon start="63056" stop="62743"/>
              <exon start="62564" stop="62497"/>
              <exon start="62416" stop="62238"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E733571" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64957" stop="64829"/>
              <exon start="63670" stop="63548"/>
              <exon start="63056" stop="62820"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E725732" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64957" stop="64829"/>
              <exon start="63670" stop="63548"/>
              <exon start="63056" stop="62821"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E563339" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64957" stop="64829"/>
              <exon start="63670" stop="63548"/>
              <exon start="63056" stop="62848"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E725457" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64957" stop="64829"/>
              <exon start="63670" stop="63548"/>
              <exon start="63056" stop="62937"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E468340" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64956" stop="64829"/>
              <exon start="63670" stop="63548"/>
              <exon start="63056" stop="62743"/>
              <exon start="62564" stop="62497"/>
              <exon start="62416" stop="62195"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E733161" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64956" stop="64829"/>
              <exon start="63670" stop="63548"/>
              <exon start="63056" stop="62743"/>
              <exon start="62564" stop="62497"/>
              <exon start="62416" stop="62270"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E579005" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64956" stop="64829"/>
              <exon start="63670" stop="63548"/>
              <exon start="63056" stop="62743"/>
              <exon start="62564" stop="62497"/>
              <exon start="62416" stop="62292"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E346192" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64956" stop="64829"/>
              <exon start="63670" stop="63548"/>
              <exon start="63056" stop="62743"/>
              <exon start="62564" stop="62497"/>
              <exon start="62416" stop="62349"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E343260" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64956" stop="64829"/>
              <exon start="63670" stop="63548"/>
              <exon start="63056" stop="62743"/>
              <exon start="62564" stop="62519"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E578531" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64956" stop="64829"/>
              <exon start="63670" stop="63599"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E303989" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64954" stop="64829"/>
              <exon start="63670" stop="63548"/>
              <exon start="63056" stop="62743"/>
              <exon start="62564" stop="62497"/>
              <exon start="62416" stop="62247"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E703245" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64954" stop="64829"/>
              <exon start="63670" stop="63548"/>
              <exon start="63056" stop="62879"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E335395" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64953" stop="64829"/>
              <exon start="63670" stop="63548"/>
              <exon start="63056" stop="62743"/>
              <exon start="62564" stop="62497"/>
              <exon start="62416" stop="62212"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E711589" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64953" stop="64829"/>
              <exon start="63670" stop="63548"/>
              <exon start="63056" stop="62743"/>
              <exon start="62564" stop="62497"/>
              <exon start="62416" stop="62289"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E601385" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64953" stop="64829"/>
              <exon start="63670" stop="63548"/>
              <exon start="63056" stop="62743"/>
              <exon start="62564" stop="62497"/>
              <exon start="62416" stop="62342"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E591997" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64952" stop="64829"/>
              <exon start="63670" stop="63548"/>
              <exon start="63056" stop="62743"/>
              <exon start="62564" stop="62497"/>
              <exon start="62416" stop="62189"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E703154" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64952" stop="64829"/>
              <exon start="63670" stop="63548"/>
              <exon start="63056" stop="62743"/>
              <exon start="62564" stop="62497"/>
              <exon start="62416" stop="62201"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E716435" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64952" stop="64829"/>
              <exon start="63670" stop="63548"/>
              <exon start="63056" stop="62743"/>
              <exon start="62564" stop="62497"/>
              <exon start="62416" stop="62239"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E712590" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64952" stop="64829"/>
              <exon start="63670" stop="63548"/>
              <exon start="63056" stop="62743"/>
              <exon start="62564" stop="62497"/>
              <exon start="62416" stop="62290"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E455971" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64952" stop="64829"/>
              <exon start="63670" stop="63548"/>
              <exon start="63056" stop="62743"/>
              <exon start="62564" stop="62497"/>
              <exon start="62416" stop="62349"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E455504" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64952" stop="64829"/>
              <exon start="63670" stop="63548"/>
              <exon start="63056" stop="62743"/>
              <exon start="62564" stop="62523"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E348309" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64952" stop="64829"/>
              <exon start="63670" stop="63548"/>
              <exon start="63056" stop="62743"/>
              <exon start="62564" stop="62546"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E573100" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64952" stop="64829"/>
              <exon start="63670" stop="63548"/>
              <exon start="63056" stop="62755"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E570638" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64952" stop="64829"/>
              <exon start="63670" stop="63548"/>
              <exon start="63056" stop="62783"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E312181" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64952" stop="64829"/>
              <exon start="63670" stop="63548"/>
              <exon start="63056" stop="62800"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E399900" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64952" stop="64829"/>
              <exon start="63670" stop="63548"/>
              <exon start="63056" stop="62848"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E569218" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64952" stop="64829"/>
              <exon start="63670" stop="63548"/>
              <exon start="63056" stop="62870"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E248210" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64951" stop="64829"/>
              <exon start="63670" stop="63548"/>
              <exon start="63056" stop="62743"/>
              <exon start="62564" stop="62497"/>
              <exon start="62416" stop="62280"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E588598" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64951" stop="64829"/>
              <exon start="63670" stop="63548"/>
              <exon start="63056" stop="62743"/>
              <exon start="62564" stop="62497"/>
              <exon start="62416" stop="62292"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E604424" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64951" stop="64829"/>
              <exon start="63670" stop="63548"/>
              <exon start="63056" stop="62743"/>
              <exon start="62564" stop="62497"/>
              <exon start="62416" stop="62349"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E453756" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64951" stop="64829"/>
              <exon start="63670" stop="63548"/>
              <exon start="63056" stop="62743"/>
              <exon start="62564" stop="62497"/>
              <exon start="62416" stop="62350"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E593580" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64951" stop="64829"/>
              <exon start="63670" stop="63548"/>
              <exon start="63056" stop="62743"/>
              <exon start="62564" stop="62497"/>
              <exon start="62416" stop="62360"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E586011" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64951" stop="64829"/>
              <exon start="63670" stop="63548"/>
              <exon start="63056" stop="62743"/>
              <exon start="62564" stop="62497"/>
              <exon start="62416" stop="62368"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E590980" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64951" stop="64829"/>
              <exon start="63670" stop="63548"/>
              <exon start="63056" stop="62743"/>
              <exon start="62564" stop="62497"/>
              <exon start="62416" stop="62377"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E561086" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64951" stop="64829"/>
              <exon start="63670" stop="63548"/>
              <exon start="63056" stop="62743"/>
              <exon start="62564" stop="62497"/>
              <exon start="62416" stop="62394"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E570666" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64951" stop="64829"/>
              <exon start="63670" stop="63548"/>
              <exon start="63056" stop="62743"/>
              <exon start="62564" stop="62498"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E568924" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64951" stop="64829"/>
              <exon start="63670" stop="63548"/>
              <exon start="63056" stop="62745"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E558630" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64951" stop="64829"/>
              <exon start="63670" stop="63548"/>
              <exon start="63056" stop="62745"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E295253" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64951" stop="64829"/>
              <exon start="63670" stop="63548"/>
              <exon start="63056" stop="62747"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E291871" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64951" stop="64829"/>
              <exon start="63670" stop="63548"/>
              <exon start="63056" stop="62749"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E291858" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64951" stop="64829"/>
              <exon start="63670" stop="63548"/>
              <exon start="63056" stop="62750"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E591855" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64951" stop="64829"/>
              <exon start="63670" stop="63548"/>
              <exon start="63056" stop="62767"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E574513" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64951" stop="64829"/>
              <exon start="63670" stop="63548"/>
              <exon start="63056" stop="62767"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E320094" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64951" stop="64829"/>
              <exon start="63670" stop="63548"/>
              <exon start="63056" stop="62856"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E475917" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64951" stop="64829"/>
              <exon start="63670" stop="63548"/>
              <exon start="63056" stop="62860"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E319497" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64951" stop="64829"/>
              <exon start="63670" stop="63548"/>
              <exon start="63056" stop="62881"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E291990" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64950" stop="64829"/>
              <exon start="63670" stop="63548"/>
              <exon start="63056" stop="62743"/>
              <exon start="62564" stop="62497"/>
              <exon start="62416" stop="62307"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E347468" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64950" stop="64829"/>
              <exon start="63670" stop="63548"/>
              <exon start="63056" stop="62743"/>
              <exon start="62564" stop="62497"/>
              <exon start="62416" stop="62377"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E343674" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64950" stop="64829"/>
              <exon start="63670" stop="63548"/>
              <exon start="63056" stop="62743"/>
              <exon start="62564" stop="62497"/>
              <exon start="62416" stop="62393"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E560890" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64950" stop="64829"/>
              <exon start="63670" stop="63548"/>
              <exon start="63056" stop="62743"/>
              <exon start="62564" stop="62545"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E291062" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64950" stop="64829"/>
              <exon start="63670" stop="63548"/>
              <exon start="63056" stop="62747"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E279644" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64950" stop="64829"/>
              <exon start="63670" stop="63548"/>
              <exon start="63056" stop="62747"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E288445" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64950" stop="64829"/>
              <exon start="63670" stop="63548"/>
              <exon start="63056" stop="62750"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E291047" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64950" stop="64829"/>
              <exon start="63670" stop="63548"/>
              <exon start="63056" stop="62762"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E299174" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64950" stop="64829"/>
              <exon start="63670" stop="63548"/>
              <exon start="63056" stop="62813"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E287885" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64950" stop="64829"/>
              <exon start="63670" stop="63548"/>
              <exon start="63056" stop="62828"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E287282" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64950" stop="64829"/>
              <exon start="63670" stop="63548"/>
              <exon start="63056" stop="62848"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E277509" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64950" stop="64829"/>
              <exon start="63670" stop="63548"/>
              <exon start="63056" stop="62870"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E290951" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64950" stop="64829"/>
              <exon start="63670" stop="63548"/>
              <exon start="63056" stop="62870"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E287869" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64949" stop="64829"/>
              <exon start="63670" stop="63548"/>
              <exon start="63056" stop="62743"/>
              <exon start="62564" stop="62527"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E573552" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64946" stop="64829"/>
              <exon start="63670" stop="63548"/>
              <exon start="63056" stop="62915"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E469700" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64946" stop="64829"/>
              <exon start="63670" stop="63548"/>
              <exon start="63056" stop="62965"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E560844" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64944" stop="64829"/>
              <exon start="63670" stop="63548"/>
              <exon start="63056" stop="62785"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E366107" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64943" stop="64829"/>
              <exon start="63670" stop="63548"/>
              <exon start="63056" stop="62995"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E403625" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64940" stop="64829"/>
              <exon start="63670" stop="63548"/>
              <exon start="63056" stop="62923"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E338854" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64931" stop="64829"/>
              <exon start="63670" stop="63548"/>
              <exon start="63056" stop="62745"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E561762" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64921" stop="64829"/>
              <exon start="63670" stop="63548"/>
              <exon start="63056" stop="62826"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E442205" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64919" stop="64829"/>
              <exon start="63670" stop="63548"/>
              <exon start="63056" stop="62743"/>
              <exon start="62564" stop="62497"/>
              <exon start="62416" stop="62365"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E567583" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64913" stop="64829"/>
              <exon start="63670" stop="63548"/>
              <exon start="63056" stop="62869"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E254915" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64911" stop="64829"/>
              <exon start="63670" stop="63548"/>
              <exon start="63056" stop="62743"/>
              <exon start="62564" stop="62497"/>
              <exon start="62416" stop="62342"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E391050" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64910" stop="64829"/>
              <exon start="63670" stop="63548"/>
              <exon start="63056" stop="62745"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E287820" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64908" stop="64829"/>
              <exon start="63670" stop="63548"/>
              <exon start="63056" stop="62743"/>
              <exon start="62564" stop="62497"/>
              <exon start="62416" stop="62275"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E602351" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64897" stop="64829"/>
              <exon start="63670" stop="63548"/>
              <exon start="63056" stop="62856"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E325087" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64876" stop="64829"/>
              <exon start="63670" stop="63548"/>
              <exon start="63056" stop="62745"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E323499" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64869" stop="64829"/>
              <exon start="63670" stop="63548"/>
              <exon start="63056" stop="62855"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E569043" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="63668" stop="63548"/>
              <exon start="63056" stop="62743"/>
              <exon start="62564" stop="62497"/>
              <exon start="62416" stop="62221"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E715785" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="63667" stop="63548"/>
              <exon start="63056" stop="62743"/>
              <exon start="62564" stop="62497"/>
              <exon start="62416" stop="62223"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E575560" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="63664" stop="63548"/>
              <exon start="63056" stop="62743"/>
              <exon start="62564" stop="62497"/>
              <exon start="62416" stop="62195"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E373504" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="63663" stop="63548"/>
              <exon start="63056" stop="62743"/>
              <exon start="62564" stop="62497"/>
              <exon start="62416" stop="62195"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E373505" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="63663" stop="63548"/>
              <exon start="63056" stop="62867"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E290571" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="63661" stop="63548"/>
              <exon start="63056" stop="62743"/>
              <exon start="62564" stop="62497"/>
              <exon start="62416" stop="62195"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E587935" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="63644" stop="63548"/>
              <exon start="63056" stop="62743"/>
              <exon start="62564" stop="62497"/>
              <exon start="62416" stop="62237"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E715233" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="63641" stop="63548"/>
              <exon start="63056" stop="62743"/>
              <exon start="62564" stop="62497"/>
              <exon start="62416" stop="62205"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E599383" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="63636" stop="63548"/>
              <exon start="63056" stop="62743"/>
              <exon start="62564" stop="62497"/>
              <exon start="62416" stop="62213"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E711959" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="63628" stop="63548"/>
              <exon start="63056" stop="62743"/>
              <exon start="62564" stop="62497"/>
              <exon start="62416" stop="62384"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E476956" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="63588" stop="63548"/>
              <exon start="63056" stop="62743"/>
              <exon start="62564" stop="62497"/>
              <exon start="62416" stop="62091"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E391318" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="63056" stop="62743"/>
              <exon start="62564" stop="62497"/>
              <exon start="62416" stop="62237"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E711549" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="63052" stop="62743"/>
              <exon start="62564" stop="62497"/>
              <exon start="62416" stop="62168"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E572323" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="63030" stop="62743"/>
              <exon start="62564" stop="62497"/>
              <exon start="62416" stop="62061"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E577881" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62997" stop="62743"/>
              <exon start="62564" stop="62497"/>
              <exon start="62416" stop="62226"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E580057" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62996" stop="62743"/>
              <exon start="62564" stop="62497"/>
              <exon start="62416" stop="62208"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E451599" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62986" stop="62743"/>
              <exon start="62564" stop="62497"/>
              <exon start="62416" stop="62180"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E713079" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62986" stop="62743"/>
              <exon start="62564" stop="62497"/>
              <exon start="62416" stop="62221"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E451398" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62986" stop="62743"/>
              <exon start="62564" stop="62497"/>
              <exon start="62416" stop="62221"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E451505" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62971" stop="62743"/>
              <exon start="62564" stop="62497"/>
              <exon start="62416" stop="62211"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E579994" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62940" stop="62743"/>
              <exon start="62564" stop="62497"/>
              <exon start="62416" stop="62217"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E341399" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62930" stop="62743"/>
              <exon start="62564" stop="62497"/>
              <exon start="62416" stop="62195"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E596200" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62927" stop="62743"/>
              <exon start="62564" stop="62497"/>
              <exon start="62416" stop="62237"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E222219" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62914" stop="62743"/>
              <exon start="62564" stop="62497"/>
              <exon start="62416" stop="62221"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E595462" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62899" stop="62743"/>
              <exon start="62564" stop="62497"/>
              <exon start="62416" stop="62221"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E597412" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62890" stop="62743"/>
              <exon start="62564" stop="62497"/>
              <exon start="62416" stop="62204"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E595126" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62875" stop="62743"/>
              <exon start="62564" stop="62497"/>
              <exon start="62416" stop="62208"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E610385" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62862" stop="62743"/>
              <exon start="62564" stop="62497"/>
              <exon start="62416" stop="62221"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E586885" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62837" stop="62743"/>
              <exon start="62564" stop="62497"/>
              <exon start="62416" stop="62211"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E586652" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62758" stop="62743"/>
              <exon start="62564" stop="62497"/>
              <exon start="62416" stop="62195"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E622108" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62757" stop="62743"/>
              <exon start="62564" stop="62497"/>
              <exon start="62416" stop="62237"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E586723" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62752" stop="62743"/>
              <exon start="62564" stop="62497"/>
              <exon start="62416" stop="62175"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E586869" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62546" stop="62497"/>
              <exon start="62416" stop="62182"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E558767" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62541" stop="62497"/>
              <exon start="62416" stop="62175"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E458618" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62529" stop="62497"/>
              <exon start="62416" stop="62237"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E228927" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62529" stop="62497"/>
              <exon start="62416" stop="62237"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E228831" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62526" stop="62497"/>
              <exon start="62416" stop="62175"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E461628" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ATTTCTCCTTCGTTCGCAGCTTCACAAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCC : GTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATG : GTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCAAGCAGAGAAAGAAAGTTTGCAAGGAGAGAAGAACGTTTGGCTCAG : GGACCAGGAGGAGAGAAGCCAGTACAACCTGCAGCACCAGCCGCTGCTGCACCAGCCCAGCCAGCCCA : GGGATCTAAGAAGTCGAAGAAATGAGCGTGATGAATTGTAAGGAGGGTTGGCGCTATGCCTACTTTTTGTCCTTGTTAGTATGGCAGTTTAGTATGTTTGATCCCTTTGCCCTTTTTGGCCTTTTAACTTTAAAAGACAATGTTACTTGTACTGAATTTGAAAGCTGGTTTAAATTTTTGATACGTTGATCCTTTTATATGTTTTAATCGTTTTTCTCCAGAGTTATTTTGCATTGTATTGAATTCTTCTTCTTGTTGCATTTCTCTCTTTTTTTTGCTAGTTGTGACTATTCAATGGAATATAGTCCTTTTATGGACGAGAGTCATTTGCTCTGATTTTAACTGTTGCAAGACAA</gDNA_template>
            <first_frame> I  S  P  S  F  A  A  S  Q  N  R  K  W  F  R  *  S  S  R  S  G  S  P  L  V  S  S  S  V  E  E  A  K  F  G  L  I  L  M  K  A  M  K  S  P  W  P  I  P  :  V  K  T  S  G  N  W  L  R  M  V  S  S  S  G  N  Q  P  K  F  T  R  D  L  V  L  A  E  *  R  R  P  R  G  K  A  V  T  L  D  M  :  V  S  A  K  V  P  G  R  L  D  C  L  P  R  C  F  G  *  G  D  *  E  S  S  G  V  C  F  A  S  I  G  N  Q  R  R  L  T  N  T  C  I  M  T  C  T  *  R  *  R  V  M  F  S  R  T  S  V  C  *  W  K  I  S  T  R  Q  R  L  R  R  L  E  R  K  P  C  P  T  N  L  R  L  G  G  Q  R  T  R  Q  A  E  K  E  S  L  Q  G  E  K  N  V  W  L  R :   D  Q  E  E  R  S  Q  Y  N  L  Q  H  Q  P  L  L  H  Q  P  S  Q  P   : R  D  L  R  S  R  R  N  E  R  D  E  L  *  G  G  L  A  L  C  L  L  F  V  L  V  S  M  A  V  *  Y  V  *  S  L  C  P  F  W  P  F  N  F  K  R  Q  C  Y  L  Y  *  I  *  K  L  V  *  I  F  D  T  L  I  L  L  Y  V  L  I  V  F  L  Q  S  Y  F  A  L  Y  *  I  L  L  L  V  A  F  L  S  F  F  C  *  L  *  L  F  N  G  I  *  S  F  Y  G  R  E  S  F  A  L  I  L  T  V  A  R  Q </first_frame>
            <second_frame>  F  L  L  R  S  Q  L  H  K  I  E  N  G  F  V  E  A  P  E  A  A  R  R  *  C  P  Q  V  W  K  R  Q  S  L  A  *  S  *  *  R  Q  *  N  L  H  G  Q  F  P :   S  K  H  Q  E  I  G  *  G  W  F  H  H  Q  E  T  N  Q  N  S  L  E  I  S  C  S  P  N  E  G  G  Q  E  E  R  P  S  L  W  I  W :   *  A  Q  R  Y  Q  G  G  *  T  A  Y  Q  G  A  L  D  E  E  I  E  S  P  Q  A  F  A  S  Q  V  *  G  I  K  E  D  *  Q  T  H  V  S  *  H  V  H  E  G  E  G  *  C  F  Q  E  Q  A  C  A  D  G  K  Y  P  Q  D  K  G  *  E  G  *  R  E  N  L  V  R  P  I  *  G  *  E  G  K  E  Q  G  K  Q  R  K  K  V  C  K  E  R  R  T  F  G  S   : G  T  R  R  R  E  A  S  T  T  C  S  T  S  R  C  C  T  S  P  A  S  P  :  G  I  *  E  V  E  E  M  S  V  M  N  C  K  E  G  W  R  Y  A  Y  F  L  S  L  L  V  W  Q  F  S  M  F  D  P  F  A  L  F  G  L  L  T  L  K  D  N  V  T  C  T  E  F  E  S  W  F  K  F  L  I  R  *  S  F  Y  M  F  *  S  F  F  S  R  V  I  L  H  C  I  E  F  F  F  L  L  H  F  S  L  F  F  A  S  C  D  Y  S  M  E  Y  S  P  F  M  D  E  S  H  L  L  *  F  *  L  L  Q  D   </second_frame>
            <third_frame>   F  S  F  V  R  S  F  T  K  S  K  M  V  S  L  K  L  Q  K  R  L  A  A  S  V  L  K  C  G  R  G  K  V  W  L  D  P  N  E  G  N  E  I  S  M  A  N  S   : R  Q  N  I  R  K  L  V  K  D  G  F  I  I  R  K  P  T  K  I  H  S  R  S  R  A  R  R  M  K  E  A  K  R  K  G  R  H  S  G  Y   : G  K  R  K  G  T  R  E  A  R  L  P  T  K  V  L  W  M  R  R  L  R  V  L  R  R  L  L  R  K  Y  R  E  S  K  K  I  D  K  H  M  Y  H  D  M  Y  M  K  V  K  G  N  V  F  K  N  K  R  V  L  M  E  N  I  H  K  T  K  A  E  K  A  R  E  K  T  L  S  D  Q  F  E  A  R  R  A  K  N  K  A  S  R  E  R  K  F  A  R  R  E  E  R  L  A  Q  :  G  P  G  G  E  K  P  V  Q  P  A  A  P  A  A  A  A  P  A  Q  P  A  Q :   G  S  K  K  S  K  K  *  A  *  *  I  V  R  R  V  G  A  M  P  T  F  C  P  C  *  Y  G  S  L  V  C  L  I  P  L  P  F  L  A  F  *  L  *  K  T  M  L  L  V  L  N  L  K  A  G  L  N  F  *  Y  V  D  P  F  I  C  F  N  R  F  S  P  E  L  F  C  I  V  L  N  S  S  S  C  C  I  S  L  F  F  L  L  V  V  T  I  Q  W  N  I  V  L  L  W  T  R  V  I  C  S  D  F  N  C  C  K  T  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06SLm0022H01.1" strand="-"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="64973" stop="64829"/>
                    <exon start="63670" stop="63548"/>
                    <exon start="63056" stop="62743"/>
                    <exon start="62564" stop="62497"/>
                    <exon start="62416" stop="62392"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>672</number_coding_nucleotides>
                  <number_encoded_amino_acids>224</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FSFVRSFTKSKMVSLKLQKRLAASVLKCGRGKVWLDPNEGNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKVLWMRRLRVLRRLLRKYRESKKIDKHMYHDMYMKVKGNVFKNKRVLMENIHKTKAEKAREKTLSDQFEARRAKNKASRERKFARREERLAQGPGGEKPVQPAAPAAAAPAQPAQGSKKSKK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="64960" e_stop="64829"/>
            <exon e_start="63670" e_stop="63548"/>
            <exon e_start="63056" e_stop="62791"/>
            <exon e_start="62564" e_stop="62557"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.955" e_score="1.000"/>
          <exon-intron don_prob="0.909" acc_prob="0.975" e_score="1.000"/>
          <exon-intron don_prob="0.420" acc_prob="1.000" e_score="1.000"/>
          <exon-only e_score="0.500"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="64960" e_stop="64829" e_length="132"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.955">
            <gDNA_intron_boundary i_start="64828" i_stop="63671" i_length="1158"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="63670" e_stop="63548" e_length="123"/>
          </exon>
          <intron i_serial="2" don_prob="0.909" acc_prob="0.975">
            <gDNA_intron_boundary i_start="63547" i_stop="63057" i_length="491"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="63056" e_stop="62791" e_length="266"/>
          </exon>
          <intron i_serial="3" don_prob="0.420" acc_prob="1.000">
            <gDNA_intron_boundary i_start="62790" i_stop="62565" i_length="226"/>
          </intron>
          <exon e_serial="4" e_score="0.500">
            <gDNA_exon_boundary e_start="62564" e_stop="62557" e_length="8"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64960" stop="64829"/>
              <exon start="63670" stop="63548"/>
              <exon start="63056" stop="62814"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E299345" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64960" stop="64829"/>
              <exon start="63670" stop="63548"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E281571" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64959" stop="64829"/>
              <exon start="63670" stop="63548"/>
              <exon start="63056" stop="62923"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E445426" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64958" stop="64829"/>
              <exon start="63670" stop="63548"/>
              <exon start="63056" stop="62830"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E295680" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64957" stop="64829"/>
              <exon start="63670" stop="63548"/>
              <exon start="63056" stop="62820"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E725732" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64957" stop="64829"/>
              <exon start="63670" stop="63548"/>
              <exon start="63056" stop="62821"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E563339" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64957" stop="64829"/>
              <exon start="63670" stop="63548"/>
              <exon start="63056" stop="62848"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E725457" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64957" stop="64829"/>
              <exon start="63670" stop="63548"/>
              <exon start="63056" stop="62937"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E468340" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64956" stop="64829"/>
              <exon start="63670" stop="63599"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E303989" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64954" stop="64829"/>
              <exon start="63670" stop="63548"/>
              <exon start="63056" stop="62879"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E335395" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64952" stop="64829"/>
              <exon start="63670" stop="63548"/>
              <exon start="63056" stop="62800"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E399900" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64952" stop="64829"/>
              <exon start="63670" stop="63548"/>
              <exon start="63056" stop="62848"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E569218" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64952" stop="64829"/>
              <exon start="63670" stop="63548"/>
              <exon start="63056" stop="62870"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E248210" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64951" stop="64829"/>
              <exon start="63670" stop="63548"/>
              <exon start="63056" stop="62856"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E475917" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64951" stop="64829"/>
              <exon start="63670" stop="63548"/>
              <exon start="63056" stop="62860"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E319497" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64951" stop="64829"/>
              <exon start="63670" stop="63548"/>
              <exon start="63056" stop="62881"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E291990" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64950" stop="64829"/>
              <exon start="63670" stop="63548"/>
              <exon start="63056" stop="62813"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E287885" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64950" stop="64829"/>
              <exon start="63670" stop="63548"/>
              <exon start="63056" stop="62828"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E287282" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64950" stop="64829"/>
              <exon start="63670" stop="63548"/>
              <exon start="63056" stop="62848"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E277509" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64950" stop="64829"/>
              <exon start="63670" stop="63548"/>
              <exon start="63056" stop="62870"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E290951" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64950" stop="64829"/>
              <exon start="63670" stop="63548"/>
              <exon start="63056" stop="62870"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E287869" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64946" stop="64829"/>
              <exon start="63670" stop="63548"/>
              <exon start="63056" stop="62915"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E469700" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64946" stop="64829"/>
              <exon start="63670" stop="63548"/>
              <exon start="63056" stop="62965"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E560844" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64943" stop="64829"/>
              <exon start="63670" stop="63548"/>
              <exon start="63056" stop="62995"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E403625" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64940" stop="64829"/>
              <exon start="63670" stop="63548"/>
              <exon start="63056" stop="62923"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E338854" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64921" stop="64829"/>
              <exon start="63670" stop="63548"/>
              <exon start="63056" stop="62826"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E442205" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64913" stop="64829"/>
              <exon start="63670" stop="63548"/>
              <exon start="63056" stop="62869"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E254915" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64897" stop="64829"/>
              <exon start="63670" stop="63548"/>
              <exon start="63056" stop="62856"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E325087" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64869" stop="64829"/>
              <exon start="63670" stop="63548"/>
              <exon start="63056" stop="62855"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E569043" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="63663" stop="63548"/>
              <exon start="63056" stop="62867"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E290571" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="63037" stop="62791"/>
              <exon start="62564" stop="62557"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E615216" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GCAGCTTCACAAAATCGAAAATGGTTTCGTTGAAGCTCCAGAAGCGGCTCGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCC : GTCAAAACATCAGGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATG : GTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAG : GGACCAGG</gDNA_template>
            <first_frame> A  A  S  Q  N  R  K  W  F  R  *  S  S  R  S  G  S  P  L  V  S  S  S  V  E  E  A  K  F  G  L  I  L  M  K  A  M  K  S  P  W  P  I  P  :  V  K  T  S  G  N  W  L  R  M  V  S  S  S  G  N  Q  P  K  F  T  R  D  L  V  L  A  E  *  R  R  P  R  G  K  A  V  T  L  D  M  :  V  S  A  K  V  P  G  R  L  D  C  L  P  R  C  F  G  *  G  D  *  E  S  S  G  V  C  F  A  S  I  G  N  Q  R  R  L  T  N  T  C  I  M  T  C  T  *  R  *  R  V  M  F  S  R  T  S  V  C  *  W  K  I  S  T  R  Q  R  L  R  R  L  E  R  K  P  C  P  T  N  L  R  L  G  G  Q  R  T  R :   D  Q  </first_frame>
            <second_frame>  Q  L  H  K  I  E  N  G  F  V  E  A  P  E  A  A  R  R  *  C  P  Q  V  W  K  R  Q  S  L  A  *  S  *  *  R  Q  *  N  L  H  G  Q  F  P :   S  K  H  Q  E  I  G  *  G  W  F  H  H  Q  E  T  N  Q  N  S  L  E  I  S  C  S  P  N  E  G  G  Q  E  E  R  P  S  L  W  I  W :   *  A  Q  R  Y  Q  G  G  *  T  A  Y  Q  G  A  L  D  E  E  I  E  S  P  Q  A  F  A  S  Q  V  *  G  I  K  E  D  *  Q  T  H  V  S  *  H  V  H  E  G  E  G  *  C  F  Q  E  Q  A  C  A  D  G  K  Y  P  Q  D  K  G  *  E  G  *  R  E  N  L  V  R  P  I  *  G  *  E  G  K  E  Q   : G  T  R </second_frame>
            <third_frame>   S  F  T  K  S  K  M  V  S  L  K  L  Q  K  R  L  A  A  S  V  L  K  C  G  R  G  K  V  W  L  D  P  N  E  G  N  E  I  S  M  A  N  S   : R  Q  N  I  R  K  L  V  K  D  G  F  I  I  R  K  P  T  K  I  H  S  R  S  R  A  R  R  M  K  E  A  K  R  K  G  R  H  S  G  Y   : G  K  R  K  G  T  R  E  A  R  L  P  T  K  V  L  W  M  R  R  L  R  V  L  R  R  L  L  R  K  Y  R  E  S  K  K  I  D  K  H  M  Y  H  D  M  Y  M  K  V  K  G  N  V  F  K  N  K  R  V  L  M  E  N  I  H  K  T  K  A  E  K  A  R  E  K  T  L  S  D  Q  F  E  A  R  R  A  K  N  K  :  G  P   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06SLm0022H01.1" strand="-"/>
                <serials PGL_serial="4" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="64958" stop="64829"/>
                    <exon start="63670" stop="63548"/>
                    <exon start="63056" stop="62791"/>
                    <exon start="62564" stop="62559"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>525</number_coding_nucleotides>
                  <number_encoded_amino_acids>175</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SFTKSKMVSLKLQKRLAASVLKCGRGKVWLDPNEGNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKVLWMRRLRVLRRLLRKYRESKKIDKHMYHDMYMKVKGNVFKNKRVLMENIHKTKAEKAREKTLSDQFEARRAKNKGP</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="-" PGL_start="66992" PGL_stop="66545"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="66992" e_stop="66545"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.922"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.922">
            <gDNA_exon_boundary e_start="66992" e_stop="66545" e_length="448"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="66992" stop="66671"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E393076" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="66992" stop="66702"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E393075" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="66991" stop="66545"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E200845" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TAAAATGTATGTATATTGCATAATTATAAGTGTATAGCAAGAAGATATATGTTTTTCTCACTGTATACAAAAACAGAAACACAATATATACACTTCTGTTATATAAAGCTAGAGAAAATTGTATTTCACTGCAATTGTATAATTCACAATTGTATAATTCGTTGCCCTTTTTCTCTGCAATATTTGAAGTAAAATGTTTGTAAATTGTATAATTAAGTGTATAACACAAAGATATACATTTTTGCATGTGTATATACAATTTTCTCTCGCTTTATACAAAACAGAAACAGAATTATACACTTCTGTGTATAAAGCGAGAGAGGCGAGCGAGAATGGAGAGTGGCGAGCGAGATTTTTGGGAGAGAGACGCTGGCAAATTTTAGCTAATGTTTGCTATGGAGCACAATTAAATCAAACCCTAGCTATTTCATTTAATTTAGGTTATTAG</gDNA_template>
            <first_frame> *  N  V  C  I  L  H  N  Y  K  C  I  A  R  R  Y  M  F  F  S  L  Y  T  K  T  E  T  Q  Y  I  H  F  C  Y  I  K  L  E  K  I  V  F  H  C  N  C  I  I  H  N  C  I  I  R  C  P  F  S  L  Q  Y  L  K  *  N  V  C  K  L  Y  N  *  V  Y  N  T  K  I  Y  I  F  A  C  V  Y  T  I  F  S  R  F  I  Q  N  R  N  R  I  I  H  F  C  V  *  S  E  R  G  E  R  E  W  R  V  A  S  E  I  F  G  R  E  T  L  A  N  F  S  *  C  L  L  W  S  T  I  K  S  N  P  S  Y  F  I  *  F  R  L  L  </first_frame>
            <second_frame>  K  M  Y  V  Y  C  I  I  I  S  V  *  Q  E  D  I  C  F  S  H  C  I  Q  K  Q  K  H  N  I  Y  T  S  V  I  *  S  *  R  K  L  Y  F  T  A  I  V  *  F  T  I  V  *  F  V  A  L  F  L  C  N  I  *  S  K  M  F  V  N  C  I  I  K  C  I  T  Q  R  Y  T  F  L  H  V  Y  I  Q  F  S  L  A  L  Y  K  T  E  T  E  L  Y  T  S  V  Y  K  A  R  E  A  S  E  N  G  E  W  R  A  R  F  L  G  E  R  R  W  Q  I  L  A  N  V  C  Y  G  A  Q  L  N  Q  T  L  A  I  S  F  N  L  G  Y  * </second_frame>
            <third_frame>   K  C  M  Y  I  A  *  L  *  V  Y  S  K  K  I  Y  V  F  L  T  V  Y  K  N  R  N  T  I  Y  T  L  L  L  Y  K  A  R  E  N  C  I  S  L  Q  L  Y  N  S  Q  L  Y  N  S  L  P  F  F  S  A  I  F  E  V  K  C  L  *  I  V  *  L  S  V  *  H  K  D  I  H  F  C  M  C  I  Y  N  F  L  S  L  Y  T  K  Q  K  Q  N  Y  T  L  L  C  I  K  R  E  R  R  A  R  M  E  S  G  E  R  D  F  W  E  R  D  A  G  K  F  *  L  M  F  A  M  E  H  N  *  I  K  P  *  L  F  H  L  I  *  V  I   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06SLm0022H01.1" strand="-"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="66805" stop="66545"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>258</number_coding_nucleotides>
                  <number_encoded_amino_acids>86</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SKMFVNCIIKCITQRYTFLHVYIQFSLALYKTETELYTSVYKAREASENGEWRARFLGERRWQILANVCYGAQLNQTLAISFNLGY*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="-" PGL_start="70556" PGL_stop="67460"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="70556" e_stop="70298"/>
            <exon e_start="70190" e_stop="69882"/>
            <exon e_start="69797" e_stop="69508"/>
            <exon e_start="69369" e_stop="69150"/>
            <exon e_start="68094" e_stop="67685"/>
            <exon e_start="67491" e_stop="67460"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.981" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.131" e_score="0.974"/>
          <exon-intron don_prob="0.992" acc_prob="0.998" e_score="0.997"/>
          <exon-intron don_prob="0.991" acc_prob="0.994" e_score="0.991"/>
          <exon-intron don_prob="0.003" acc_prob="0.000" e_score="0.956"/>
          <exon-only e_score="0.719"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="70556" e_stop="70298" e_length="259"/>
          </exon>
          <intron i_serial="1" don_prob="0.981" acc_prob="1.000">
            <gDNA_intron_boundary i_start="70297" i_stop="70191" i_length="107"/>
          </intron>
          <exon e_serial="2" e_score="0.974">
            <gDNA_exon_boundary e_start="70190" e_stop="69882" e_length="309"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.131">
            <gDNA_intron_boundary i_start="69881" i_stop="69798" i_length="84"/>
          </intron>
          <exon e_serial="3" e_score="0.997">
            <gDNA_exon_boundary e_start="69797" e_stop="69508" e_length="290"/>
          </exon>
          <intron i_serial="3" don_prob="0.992" acc_prob="0.998">
            <gDNA_intron_boundary i_start="69507" i_stop="69370" i_length="138"/>
          </intron>
          <exon e_serial="4" e_score="0.991">
            <gDNA_exon_boundary e_start="69369" e_stop="69150" e_length="220"/>
          </exon>
          <intron i_serial="4" don_prob="0.991" acc_prob="0.994">
            <gDNA_intron_boundary i_start="69149" i_stop="68095" i_length="1055"/>
          </intron>
          <exon e_serial="5" e_score="0.956">
            <gDNA_exon_boundary e_start="68094" e_stop="67685" e_length="410"/>
          </exon>
          <intron i_serial="5" don_prob="0.003" acc_prob="0.000">
            <gDNA_intron_boundary i_start="67684" i_stop="67492" i_length="193"/>
          </intron>
          <exon e_serial="6" e_score="0.719">
            <gDNA_exon_boundary e_start="67491" e_stop="67460" e_length="32"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70556" stop="70298"/>
              <exon start="70190" stop="69950"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E331837" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70551" stop="70298"/>
              <exon start="70190" stop="70004"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E359596" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70551" stop="70298"/>
              <exon start="70190" stop="70005"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E364303" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70551" stop="70298"/>
              <exon start="70190" stop="70065"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E364131" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70550" stop="70298"/>
              <exon start="70190" stop="69882"/>
              <exon start="69797" stop="69508"/>
              <exon start="69369" stop="69150"/>
              <exon start="68094" stop="67685"/>
              <exon start="67491" stop="67460"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E747280" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70550" stop="70298"/>
              <exon start="70190" stop="69997"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E362215" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70549" stop="70358"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E374306" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70546" stop="70298"/>
              <exon start="70190" stop="69982"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E359939" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70538" stop="70298"/>
              <exon start="70190" stop="69882"/>
              <exon start="69797" stop="69780"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E362913" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70441" stop="70298"/>
              <exon start="70190" stop="70051"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E359727" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CCTTCTTTAATTTCTCACTTTTTTTCTTCTTTATTTTTATTTTTTTCAATTTCCTATTTAGGCCACAACCACAATGGCTATTCCAAAAGGATTAGAAATCAATAATATTGTAGGATTATTCTTACTTTTGGGTATAGCCATTTTATCATCAAAAGTTGCAGAATGTGCACCTTTTGGTTCGCGTCGTGGCCTTATGGAGACAGTTTTCGATGTTACCAAGCACGGAGCTAGACCAGATCCCACTGCAGATAGCACTCGG : GGATTTATGATGGCATGGAGAGCAGCATGTCAATCAACAGGCCCAGCAAAAGTTGTTATTCCACCAGGAACATTTACTACAGGAGAAACTATTTTTCAAGGCCCATGTACATGTCCAAAGCCCATTATTATTGAAATTCAAGGGACAGTATTGTCAAATACAGACATAAGTTTGTACTCACGTGCCTCATGGATATCCCTCGAACACGTGGACGGTGTCGTTATTACAGGTGGCGGAACTCTAAACGGACAAGGAAATGCCAGCTGGCAGTATGCTGACAAAAGCGGAAACTCTCCTCCTCTCCCTACG : TCTCTTGTATTTCAAACTGTGAAGAGTTCTTCCATCAATGGCATAAATTTTGTGGATTCCAAAGGTGTCCATTTGAAAGTTACTGATAGTAATGACATTACAGTTTCAAAAATCAAGATTACAGCACCAGCAACAAGTCCAAATACTGATGGAATTCATATAAGTGAAACAATTAATATCAATGTTACTGATAGCAACATTGGGACAGGTGATGATTGCATTAGTGTTGGACATGGTACTACCAATATTTTTGTCAATAATATTCATTGTGGCCCTGGACATGGAATAAG : TATTGGAAGCCTTGGAAAGAGACCAGATGAGAAGGATGTTACAAAAGTTTATATAAAAAATTGTACATTCCACAGTACAACAAATGGTGCAAGAATCAAGACTTATATGGATTCATCTCCACTACAAGTTTCTGATGTTGTTTATGAAGATATTGTCTTGGAGGATGTTAAAAATCCAATTCTTATTGATCAACACTATAATTCCAAGAACAAGGTTGAG : CCATCAAAAGTGAAACTAAAAGATATTCACTTCAAGAACATAAGGGGGACAACAAATACAAAAGCTCCAGTATCACTTAATTGCAGTGAAGCAGCTCCATGTGAAGGAGTTGAATTGGCTGATATTGATATAGCTCCATCTGGTACAACTGGACCTCTACAAGGAGCAACATGTCAAAATGCCAAGACAGTATTCAATGGAAAAACTAATGTTCCAGCATGTAAATAATTACATTACATTATTAATCAAATCATGTCCATATGAAAAAATGTGTATAAATTTCAATATAACCATGTAATTTTGTTTATGGTTTATTATAATATTTATTTATATTTTTTTTTTCGATGCCTGGAAATAGAAAAAAAAGAAGAAGATAAAATTTAGCGCTTGACGCATATTAGCTAGTTAGG : TATATAGTAAAGGTTATTTTCTAATGGAAAAT</gDNA_template>
            <first_frame> P  S  L  I  S  H  F  F  S  S  L  F  L  F  F  S  I  S  Y  L  G  H  N  H  N  G  Y  S  K  R  I  R  N  Q  *  Y  C  R  I  I  L  T  F  G  Y  S  H  F  I  I  K  S  C  R  M  C  T  F  W  F  A  S  W  P  Y  G  D  S  F  R  C  Y  Q  A  R  S  *  T  R  S  H  C  R  *  H  S   : G  I  Y  D  G  M  E  S  S  M  S  I  N  R  P  S  K  S  C  Y  S  T  R  N  I  Y  Y  R  R  N  Y  F  S  R  P  M  Y  M  S  K  A  H  Y  Y  *  N  S  R  D  S  I  V  K  Y  R  H  K  F  V  L  T  C  L  M  D  I  P  R  T  R  G  R  C  R  Y  Y  R  W  R  N  S  K  R  T  R  K  C  Q  L  A  V  C  *  Q  K  R  K  L  S  S  S  P  Y   : V  S  C  I  S  N  C  E  E  F  F  H  Q  W  H  K  F  C  G  F  Q  R  C  P  F  E  S  Y  *  *  *  *  H  Y  S  F  K  N  Q  D  Y  S  T  S  N  K  S  K  Y  *  W  N  S  Y  K  *  N  N  *  Y  Q  C  Y  *  *  Q  H  W  D  R  *  *  L  H  *  C  W  T  W  Y  Y  Q  Y  F  C  Q  *  Y  S  L  W  P  W  T  W  N  K  :  Y  W  K  P  W  K  E  T  R  *  E  G  C  Y  K  S  L  Y  K  K  L  Y  I  P  Q  Y  N  K  W  C  K  N  Q  D  L  Y  G  F  I  S  T  T  S  F  *  C  C  L  *  R  Y  C  L  G  G  C  *  K  S  N  S  Y  *  S  T  L  *  F  Q  E  Q  G  *   : A  I  K  S  E  T  K  R  Y  S  L  Q  E  H  K  G  D  N  K  Y  K  S  S  S  I  T  *  L  Q  *  S  S  S  M  *  R  S  *  I  G  *  Y  *  Y  S  S  I  W  Y  N  W  T  S  T  R  S  N  M  S  K  C  Q  D  S  I  Q  W  K  N  *  C  S  S  M  *  I  I  T  L  H  Y  *  S  N  H  V  H  M  K  K  C  V  *  I  S  I  *  P  C  N  F  V  Y  G  L  L  *  Y  L  F  I  F  F  F  S  M  P  G  N  R  K  K  R  R  R  *  N  L  A  L  D  A  Y  *  L  V  R  :  Y  I  V  K  V  I  F  *  W  K   </first_frame>
            <second_frame>  L  L  *  F  L  T  F  F  L  L  Y  F  Y  F  F  Q  F  P  I  *  A  T  T  T  M  A  I  P  K  G  L  E  I  N  N  I  V  G  L  F  L  L  L  G  I  A  I  L  S  S  K  V  A  E  C  A  P  F  G  S  R  R  G  L  M  E  T  V  F  D  V  T  K  H  G  A  R  P  D  P  T  A  D  S  T  R  :  G  F  M  M  A  W  R  A  A  C  Q  S  T  G  P  A  K  V  V  I  P  P  G  T  F  T  T  G  E  T  I  F  Q  G  P  C  T  C  P  K  P  I  I  I  E  I  Q  G  T  V  L  S  N  T  D  I  S  L  Y  S  R  A  S  W  I  S  L  E  H  V  D  G  V  V  I  T  G  G  G  T  L  N  G  Q  G  N  A  S  W  Q  Y  A  D  K  S  G  N  S  P  P  L  P  T  :  S  L  V  F  Q  T  V  K  S  S  S  I  N  G  I  N  F  V  D  S  K  G  V  H  L  K  V  T  D  S  N  D  I  T  V  S  K  I  K  I  T  A  P  A  T  S  P  N  T  D  G  I  H  I  S  E  T  I  N  I  N  V  T  D  S  N  I  G  T  G  D  D  C  I  S  V  G  H  G  T  T  N  I  F  V  N  N  I  H  C  G  P  G  H  G  I  S :   I  G  S  L  G  K  R  P  D  E  K  D  V  T  K  V  Y  I  K  N  C  T  F  H  S  T  T  N  G  A  R  I  K  T  Y  M  D  S  S  P  L  Q  V  S  D  V  V  Y  E  D  I  V  L  E  D  V  K  N  P  I  L  I  D  Q  H  Y  N  S  K  N  K  V  E  :  P  S  K  V  K  L  K  D  I  H  F  K  N  I  R  G  T  T  N  T  K  A  P  V  S  L  N  C  S  E  A  A  P  C  E  G  V  E  L  A  D  I  D  I  A  P  S  G  T  T  G  P  L  Q  G  A  T  C  Q  N  A  K  T  V  F  N  G  K  T  N  V  P  A  C  K  *  L  H  Y  I  I  N  Q  I  M  S  I  *  K  N  V  Y  K  F  Q  Y  N  H  V  I  L  F  M  V  Y  Y  N  I  Y  L  Y  F  F  F  R  C  L  E  I  E  K  K  E  E  D  K  I  *  R  L  T  H  I  S  *  L  G :   I  *  *  R  L  F  S  N  G  K  </second_frame>
            <third_frame>   F  F  N  F  S  L  F  F  F  F  I  F  I  F  F  N  F  L  F  R  P  Q  P  Q  W  L  F  Q  K  D  *  K  S  I  I  L  *  D  Y  S  Y  F  W  V  *  P  F  Y  H  Q  K  L  Q  N  V  H  L  L  V  R  V  V  A  L  W  R  Q  F  S  M  L  P  S  T  E  L  D  Q  I  P  L  Q  I  A  L  G :   D  L  *  W  H  G  E  Q  H  V  N  Q  Q  A  Q  Q  K  L  L  F  H  Q  E  H  L  L  Q  E  K  L  F  F  K  A  H  V  H  V  Q  S  P  L  L  L  K  F  K  G  Q  Y  C  Q  I  Q  T  *  V  C  T  H  V  P  H  G  Y  P  S  N  T  W  T  V  S  L  L  Q  V  A  E  L  *  T  D  K  E  M  P  A  G  S  M  L  T  K  A  E  T  L  L  L  S  L  R :   L  L  Y  F  K  L  *  R  V  L  P  S  M  A  *  I  L  W  I  P  K  V  S  I  *  K  L  L  I  V  M  T  L  Q  F  Q  K  S  R  L  Q  H  Q  Q  Q  V  Q  I  L  M  E  F  I  *  V  K  Q  L  I  S  M  L  L  I  A  T  L  G  Q  V  M  I  A  L  V  L  D  M  V  L  P  I  F  L  S  I  I  F  I  V  A  L  D  M  E  *   : V  L  E  A  L  E  R  D  Q  M  R  R  M  L  Q  K  F  I  *  K  I  V  H  S  T  V  Q  Q  M  V  Q  E  S  R  L  I  W  I  H  L  H  Y  K  F  L  M  L  F  M  K  I  L  S  W  R  M  L  K  I  Q  F  L  L  I  N  T  I  I  P  R  T  R  L  S :   H  Q  K  *  N  *  K  I  F  T  S  R  T  *  G  G  Q  Q  I  Q  K  L  Q  Y  H  L  I  A  V  K  Q  L  H  V  K  E  L  N  W  L  I  L  I  *  L  H  L  V  Q  L  D  L  Y  K  E  Q  H  V  K  M  P  R  Q  Y  S  M  E  K  L  M  F  Q  H  V  N  N  Y  I  T  L  L  I  K  S  C  P  Y  E  K  M  C  I  N  F  N  I  T  M  *  F  C  L  W  F  I  I  I  F  I  Y  I  F  F  F  D  A  W  K  *  K  K  K  K  K  I  K  F  S  A  *  R  I  L  A  S  *   : V  Y  S  K  G  Y  F  L  M  E  N </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06SLm0022H01.1" strand="-"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="70495" stop="70298"/>
                    <exon start="70190" stop="69882"/>
                    <exon start="69797" stop="69508"/>
                    <exon start="69369" stop="69150"/>
                    <exon start="68094" stop="67867"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1242</number_coding_nucleotides>
                  <number_encoded_amino_acids>414</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ATTTMAIPKGLEINNIVGLFLLLGIAILSSKVAECAPFGSRRGLMETVFDVTKHGARPDPTADSTRGFMMAWRAACQSTGPAKVVIPPGTFTTGETIFQGPCTCPKPIIIEIQGTVLSNTDISLYSRASWISLEHVDGVVITGGGTLNGQGNASWQYADKSGNSPPLPTSLVFQTVKSSSINGINFVDSKGVHLKVTDSNDITVSKIKITAPATSPNTDGIHISETININVTDSNIGTGDDCISVGHGTTNIFVNNIHCGPGHGISIGSLGKRPDEKDVTKVYIKNCTFHSTTNGARIKTYMDSSPLQVSDVVYEDIVLEDVKNPILIDQHYNSKNKVEPSKVKLKDIHFKNIRGTTNTKAPVSLNCSEAAPCEGVELADIDIAPSGTTGPLQGATCQNAKTVFNGKTNVPACK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="68849" e_stop="68391"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.904"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.904">
            <gDNA_exon_boundary e_start="68849" e_stop="68391" e_length="459"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="68849" stop="68391"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E243215" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTATTATAGATGACCAAATTTTTTCTTCGAATACGAAATTAAATTACAATACGCACAAAAAAATAGTTTAAATTTTTTTCCTTTAAACTAAGGAATGAAAGAAAAAAACATAATAAGAATAAGAAACCCAAATAATTATAATAAAAGAAGTCAAAAAATAATTTATGTATGAAAAAAATTAAAATATACCTTGAACTTTGATAGAAGAATCATATATATCTCTAAATAATTTTTAAAAAAAAATTAGAAGTAACAAATATAAATTTAAAACTAATTTTTTAACTTCCGTTAAATGAAGGGTATATGTGAGCCATGTTTGTGACGACAGGGGTATATGTGAGCCGTTTTTATAACGGTAAGGACATATATGAGTCACTTTTATAACGAAGGGTATATCAGCTCCAAATGACAAAATTGAGGGATATATCAGACCCTTTTCCCTTTTTTTAATATTCAGGC</gDNA_template>
            <first_frame> L  L  *  M  T  K  F  F  L  R  I  R  N  *  I  T  I  R  T  K  K  *  F  K  F  F  S  F  K  L  R  N  E  R  K  K  H  N  K  N  K  K  P  K  *  L  *  *  K  K  S  K  N  N  L  C  M  K  K  I  K  I  Y  L  E  L  *  *  K  N  H  I  Y  L  *  I  I  F  K  K  K  L  E  V  T  N  I  N  L  K  L  I  F  *  L  P  L  N  E  G  Y  M  *  A  M  F  V  T  T  G  V  Y  V  S  R  F  Y  N  G  K  D  I  Y  E  S  L  L  *  R  R  V  Y  Q  L  Q  M  T  K  L  R  D  I  S  D  P  F  P  F  F  *  Y  S  G </first_frame>
            <second_frame>  Y  Y  R  *  P  N  F  F  F  E  Y  E  I  K  L  Q  Y  A  Q  K  N  S  L  N  F  F  P  L  N  *  G  M  K  E  K  N  I  I  R  I  R  N  P  N  N  Y  N  K  R  S  Q  K  I  I  Y  V  *  K  K  L  K  Y  T  L  N  F  D  R  R  I  I  Y  I  S  K  *  F  L  K  K  N  *  K  *  Q  I  *  I  *  N  *  F  F  N  F  R  *  M  K  G  I  C  E  P  C  L  *  R  Q  G  Y  M  *  A  V  F  I  T  V  R  T  Y  M  S  H  F  Y  N  E  G  Y  I  S  S  K  *  Q  N  *  G  I  Y  Q  T  L  F  P  F  F  N  I  Q   </second_frame>
            <third_frame>   I  I  D  D  Q  I  F  S  S  N  T  K  L  N  Y  N  T  H  K  K  I  V  *  I  F  F  L  *  T  K  E  *  K  K  K  T  *  *  E  *  E  T  Q  I  I  I  I  K  E  V  K  K  *  F  M  Y  E  K  N  *  N  I  P  *  T  L  I  E  E  S  Y  I  S  L  N  N  F  *  K  K  I  R  S  N  K  Y  K  F  K  T  N  F  L  T  S  V  K  *  R  V  Y  V  S  H  V  C  D  D  R  G  I  C  E  P  F  L  *  R  *  G  H  I  *  V  T  F  I  T  K  G  I  S  A  P  N  D  K  I  E  G  Y  I  R  P  F  S  L  F  L  I  F  R  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C06SLm0022H01.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="+" PGL_start="74728" PGL_stop="76496"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="74728" e_stop="75064"/>
            <exon e_start="75287" e_stop="75553"/>
            <exon e_start="75646" e_stop="75909"/>
            <exon e_start="75990" e_stop="76283"/>
            <exon e_start="76363" e_stop="76496"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.997" acc_prob="0.997" e_score="0.932"/>
          <exon-intron don_prob="0.973" acc_prob="0.887" e_score="0.895"/>
          <exon-intron don_prob="0.954" acc_prob="0.986" e_score="0.909"/>
          <exon-intron don_prob="0.999" acc_prob="0.993" e_score="0.963"/>
          <exon-only e_score="0.925"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.932">
            <gDNA_exon_boundary e_start="74728" e_stop="75064" e_length="337"/>
          </exon>
          <intron i_serial="1" don_prob="0.997" acc_prob="0.997">
            <gDNA_intron_boundary i_start="75065" i_stop="75286" i_length="222"/>
          </intron>
          <exon e_serial="2" e_score="0.895">
            <gDNA_exon_boundary e_start="75287" e_stop="75553" e_length="267"/>
          </exon>
          <intron i_serial="2" don_prob="0.973" acc_prob="0.887">
            <gDNA_intron_boundary i_start="75554" i_stop="75645" i_length="92"/>
          </intron>
          <exon e_serial="3" e_score="0.909">
            <gDNA_exon_boundary e_start="75646" e_stop="75909" e_length="264"/>
          </exon>
          <intron i_serial="3" don_prob="0.954" acc_prob="0.986">
            <gDNA_intron_boundary i_start="75910" i_stop="75989" i_length="80"/>
          </intron>
          <exon e_serial="4" e_score="0.963">
            <gDNA_exon_boundary e_start="75990" e_stop="76283" e_length="294"/>
          </exon>
          <intron i_serial="4" don_prob="0.999" acc_prob="0.993">
            <gDNA_intron_boundary i_start="76284" i_stop="76362" i_length="79"/>
          </intron>
          <exon e_serial="5" e_score="0.925">
            <gDNA_exon_boundary e_start="76363" e_stop="76496" e_length="134"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="74728" stop="75064"/>
              <exon start="75287" stop="75553"/>
              <exon start="75646" stop="75658"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E450801" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="75511" stop="75553"/>
              <exon start="75646" stop="75909"/>
              <exon start="75990" stop="76283"/>
              <exon start="76363" stop="76496"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E550470" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="75512" stop="75553"/>
              <exon start="75646" stop="75909"/>
              <exon start="75990" stop="76283"/>
              <exon start="76363" stop="76396"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E228077" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATCATTGTGCTTTGAGAAGTTGGTCCACATGGAGGTAGGATGGTTTGATGAACCTGAGAACTCCACTGGTATCATTGGCGCTAGGCTTTCTGCTGATGCAGCAGCAGTCCGTGGCTTAGTAGGAGATGCACTTGCTCAAATGGTCCAAGATAGTGCAACAGCACTTATAGGTTTAGCTATTGCTTTTGAAGCAAGTTGGCAGTTGGCACTTATCGTTCTTGTTATGATACCTCTAATTGGATTAAGTGGATATCTCCAAATGAAATTTATGACAGGGTTCAGTGCAGATGCAAAG : ACAATGTATGCGGAAGCAAGTCAAGTTGCGAATGATGCTGTTGGAAGTATAAGAACTGTTGCATCATTTTGTGCAGAAGAGAAGGTGATGGAAACATACAGAGGGAAGTGTGAAGGCCCATTGAAGGCAGGAATCAAGCAAGGTTTGATTAGCGGAATGGGCTTTGGTGTATCAAATACTTTGATGTTTTGTGTATATGCAACCAGTTTTTATGCTGGAGCTCTTCTTGTTCAGAATGGCAAAATCACCTTTGCAGACGTTTACCGT : GTTTTCTTTGCTCTGTCAACAGCAGCTATAGGAATTTCCCAGTCAAGCTCATTGGCTCCAGATTCAACCAAGGCCAAGAATGCAGCTGCTTCGATATTTGCTATTCTAGACAGAAAATCAAAAGTAGATCCAAGTGATGAGTCTGGTAAGACACTGGAGAATGTGAAGGGAGATATCGAGCTGAGGCACGTAAGCTTTAAGTATCCAACGAGGCCAGATGTTCAAATTTTAAGAGACCTTTGCTTAACCATCCGCAGTGGACAG : ACGGTTGCTTTAGTTGGGGAGAGCGGATGTGGAAAGTCTACTGTAATATCTTTGCTGCAAAGGTTTTATGATCCTGATTCAGGCCAGATTTCGTTGGACGGAATAGAGATTCAGAAATTCCAGGTAAAATGGCTAAGGCAGCAAATGGGGCTTGTAAGCCAAGAGCCAGTGTTGTTCAACGACACAATTCGAGCCAATATTGCCTATGGAAAGGAAGGAAATGCAATTGAAGCAGAAGTTTTAGCAGCAGCAGAACTAGCAAATGCCCACAAGTTCATCAGTGGTCTGCAACAG : GGTTATGATACGACAGTGGGAGAGCGAGGAACTCAGCTGTCCGGTGGGCAAAAGCAACGAGTGGCTATAGCGAGGGCCATATTGAAAAATCCAAAAATCCTACTATTAGATGAGGCTACAAGTGCATTGGATGC</gDNA_template>
            <first_frame> F  F  F  F  F  F  F  F  F  F  F  F  F  L  I  I  V  L  *  E  V  G  P  H  G  G  R  M  V  *  *  T  *  E  L  H  W  Y  H  W  R  *  A  F  C  *  C  S  S  S  P  W  L  S  R  R  C  T  C  S  N  G  P  R  *  C  N  S  T  Y  R  F  S  Y  C  F  *  S  K  L  A  V  G  T  Y  R  S  C  Y  D  T  S  N  W  I  K  W  I  S  P  N  E  I  Y  D  R  V  Q  C  R  C  K   : D  N  V  C  G  S  K  S  S  C  E  *  C  C  W  K  Y  K  N  C  C  I  I  L  C  R  R  E  G  D  G  N  I  Q  R  E  V  *  R  P  I  E  G  R  N  Q  A  R  F  D  *  R  N  G  L  W  C  I  K  Y  F  D  V  L  C  I  C  N  Q  F  L  C  W  S  S  S  C  S  E  W  Q  N  H  L  C  R  R  L  P   : C  F  L  C  S  V  N  S  S  Y  R  N  F  P  V  K  L  I  G  S  R  F  N  Q  G  Q  E  C  S  C  F  D  I  C  Y  S  R  Q  K  I  K  S  R  S  K  *  *  V  W  *  D  T  G  E  C  E  G  R  Y  R  A  E  A  R  K  L  *  V  S  N  E  A  R  C  S  N  F  K  R  P  L  L  N  H  P  Q  W  T   : D  G  C  F  S  W  G  E  R  M  W  K  V  Y  C  N  I  F  A  A  K  V  L  *  S  *  F  R  P  D  F  V  G  R  N  R  D  S  E  I  P  G  K  M  A  K  A  A  N  G  A  C  K  P  R  A  S  V  V  Q  R  H  N  S  S  Q  Y  C  L  W  K  G  R  K  C  N  *  S  R  S  F  S  S  S  R  T  S  K  C  P  Q  V  H  Q  W  S  A  T   : G  L  *  Y  D  S  G  R  A  R  N  S  A  V  R  W  A  K  A  T  S  G  Y  S  E  G  H  I  E  K  S  K  N  P  T  I  R  *  G  Y  K  C  I  G  C </first_frame>
            <second_frame>  F  F  F  F  F  F  F  F  F  F  F  F  F  *  S  L  C  F  E  K  L  V  H  M  E  V  G  W  F  D  E  P  E  N  S  T  G  I  I  G  A  R  L  S  A  D  A  A  A  V  R  G  L  V  G  D  A  L  A  Q  M  V  Q  D  S  A  T  A  L  I  G  L  A  I  A  F  E  A  S  W  Q  L  A  L  I  V  L  V  M  I  P  L  I  G  L  S  G  Y  L  Q  M  K  F  M  T  G  F  S  A  D  A  K  :  T  M  Y  A  E  A  S  Q  V  A  N  D  A  V  G  S  I  R  T  V  A  S  F  C  A  E  E  K  V  M  E  T  Y  R  G  K  C  E  G  P  L  K  A  G  I  K  Q  G  L  I  S  G  M  G  F  G  V  S  N  T  L  M  F  C  V  Y  A  T  S  F  Y  A  G  A  L  L  V  Q  N  G  K  I  T  F  A  D  V  Y  R  :  V  F  F  A  L  S  T  A  A  I  G  I  S  Q  S  S  S  L  A  P  D  S  T  K  A  K  N  A  A  A  S  I  F  A  I  L  D  R  K  S  K  V  D  P  S  D  E  S  G  K  T  L  E  N  V  K  G  D  I  E  L  R  H  V  S  F  K  Y  P  T  R  P  D  V  Q  I  L  R  D  L  C  L  T  I  R  S  G  Q  :  T  V  A  L  V  G  E  S  G  C  G  K  S  T  V  I  S  L  L  Q  R  F  Y  D  P  D  S  G  Q  I  S  L  D  G  I  E  I  Q  K  F  Q  V  K  W  L  R  Q  Q  M  G  L  V  S  Q  E  P  V  L  F  N  D  T  I  R  A  N  I  A  Y  G  K  E  G  N  A  I  E  A  E  V  L  A  A  A  E  L  A  N  A  H  K  F  I  S  G  L  Q  Q  :  G  Y  D  T  T  V  G  E  R  G  T  Q  L  S  G  G  Q  K  Q  R  V  A  I  A  R  A  I  L  K  N  P  K  I  L  L  L  D  E  A  T  S  A  L  D   </second_frame>
            <third_frame>   F  F  F  F  F  F  F  F  F  F  F  F  F  D  H  C  A  L  R  S  W  S  T  W  R  *  D  G  L  M  N  L  R  T  P  L  V  S  L  A  L  G  F  L  L  M  Q  Q  Q  S  V  A  *  *  E  M  H  L  L  K  W  S  K  I  V  Q  Q  H  L  *  V  *  L  L  L  L  K  Q  V  G  S  W  H  L  S  F  L  L  *  Y  L  *  L  D  *  V  D  I  S  K  *  N  L  *  Q  G  S  V  Q  M  Q  R :   Q  C  M  R  K  Q  V  K  L  R  M  M  L  L  E  V  *  E  L  L  H  H  F  V  Q  K  R  R  *  W  K  H  T  E  G  S  V  K  A  H  *  R  Q  E  S  S  K  V  *  L  A  E  W  A  L  V  Y  Q  I  L  *  C  F  V  Y  M  Q  P  V  F  M  L  E  L  F  L  F  R  M  A  K  S  P  L  Q  T  F  T  V :   F  S  L  L  C  Q  Q  Q  L  *  E  F  P  S  Q  A  H  W  L  Q  I  Q  P  R  P  R  M  Q  L  L  R  Y  L  L  F  *  T  E  N  Q  K  *  I  Q  V  M  S  L  V  R  H  W  R  M  *  R  E  I  S  S  *  G  T  *  A  L  S  I  Q  R  G  Q  M  F  K  F  *  E  T  F  A  *  P  S  A  V  D  R :   R  L  L  *  L  G  R  A  D  V  E  S  L  L  *  Y  L  C  C  K  G  F  M  I  L  I  Q  A  R  F  R  W  T  E  *  R  F  R  N  S  R  *  N  G  *  G  S  K  W  G  L  *  A  K  S  Q  C  C  S  T  T  Q  F  E  P  I  L  P  M  E  R  K  E  M  Q  L  K  Q  K  F  *  Q  Q  Q  N  *  Q  M  P  T  S  S  S  V  V  C  N  R :   V  M  I  R  Q  W  E  S  E  E  L  S  C  P  V  G  K  S  N  E  W  L  *  R  G  P  Y  *  K  I  Q  K  S  Y  Y  *  M  R  L  Q  V  H  W  M  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06SLm0022H01.1" strand="+"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="74771" stop="75064"/>
                    <exon start="75287" stop="75553"/>
                    <exon start="75646" stop="75909"/>
                    <exon start="75990" stop="76283"/>
                    <exon start="76363" stop="76494"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1251</number_coding_nucleotides>
                  <number_encoded_amino_acids>417</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SLCFEKLVHMEVGWFDEPENSTGIIGARLSADAAAVRGLVGDALAQMVQDSATALIGLAIAFEASWQLALIVLVMIPLIGLSGYLQMKFMTGFSADAKTMYAEASQVANDAVGSIRTVASFCAEEKVMETYRGKCEGPLKAGIKQGLISGMGFGVSNTLMFCVYATSFYAGALLVQNGKITFADVYRVFFALSTAAIGISQSSSLAPDSTKAKNAAASIFAILDRKSKVDPSDESGKTLENVKGDIELRHVSFKYPTRPDVQILRDLCLTIRSGQTVALVGESGCGKSTVISLLQRFYDPDSGQISLDGIEIQKFQVKWLRQQMGLVSQEPVLFNDTIRANIAYGKEGNAIEAEVLAAAELANAHKFISGLQQGYDTTVGERGTQLSGGQKQRVAIARAILKNPKILLLDEATSALD</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="+" PGL_start="82675" PGL_stop="92408"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="82675" e_stop="83042"/>
            <exon e_start="84901" e_stop="85023"/>
            <exon e_start="85180" e_stop="85317"/>
            <exon e_start="85396" e_stop="85481"/>
            <exon e_start="85973" e_stop="86060"/>
            <exon e_start="86443" e_stop="86518"/>
            <exon e_start="87554" e_stop="87636"/>
            <exon e_start="88766" e_stop="88836"/>
            <exon e_start="89344" e_stop="89421"/>
            <exon e_start="90582" e_stop="90669"/>
            <exon e_start="91289" e_stop="91405"/>
            <exon e_start="92217" e_stop="92408"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.986" e_score="1.000"/>
          <exon-intron don_prob="0.972" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.975" e_score="1.000"/>
          <exon-intron don_prob="0.930" acc_prob="0.971" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.068" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.919" acc_prob="0.140" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.949" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.900" acc_prob="0.991" e_score="1.000"/>
          <exon-intron don_prob="0.988" acc_prob="1.000" e_score="1.000"/>
          <exon-only e_score="0.995"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="82675" e_stop="83042" e_length="368"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.986">
            <gDNA_intron_boundary i_start="83043" i_stop="84900" i_length="1858"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="84901" e_stop="85023" e_length="123"/>
          </exon>
          <intron i_serial="2" don_prob="0.972" acc_prob="0.997">
            <gDNA_intron_boundary i_start="85024" i_stop="85179" i_length="156"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="85180" e_stop="85317" e_length="138"/>
          </exon>
          <intron i_serial="3" don_prob="0.998" acc_prob="0.975">
            <gDNA_intron_boundary i_start="85318" i_stop="85395" i_length="78"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="85396" e_stop="85481" e_length="86"/>
          </exon>
          <intron i_serial="4" don_prob="0.930" acc_prob="0.971">
            <gDNA_intron_boundary i_start="85482" i_stop="85972" i_length="491"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="85973" e_stop="86060" e_length="88"/>
          </exon>
          <intron i_serial="5" don_prob="0.998" acc_prob="1.000">
            <gDNA_intron_boundary i_start="86061" i_stop="86442" i_length="382"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="86443" e_stop="86518" e_length="76"/>
          </exon>
          <intron i_serial="6" don_prob="0.068" acc_prob="0.999">
            <gDNA_intron_boundary i_start="86519" i_stop="87553" i_length="1035"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="87554" e_stop="87636" e_length="83"/>
          </exon>
          <intron i_serial="7" don_prob="0.919" acc_prob="0.140">
            <gDNA_intron_boundary i_start="87637" i_stop="88765" i_length="1129"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="88766" e_stop="88836" e_length="71"/>
          </exon>
          <intron i_serial="8" don_prob="0.991" acc_prob="0.998">
            <gDNA_intron_boundary i_start="88837" i_stop="89343" i_length="507"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="89344" e_stop="89421" e_length="78"/>
          </exon>
          <intron i_serial="9" don_prob="0.949" acc_prob="0.998">
            <gDNA_intron_boundary i_start="89422" i_stop="90581" i_length="1160"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="90582" e_stop="90669" e_length="88"/>
          </exon>
          <intron i_serial="10" don_prob="0.900" acc_prob="0.991">
            <gDNA_intron_boundary i_start="90670" i_stop="91288" i_length="619"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="91289" e_stop="91405" e_length="117"/>
          </exon>
          <intron i_serial="11" don_prob="0.988" acc_prob="1.000">
            <gDNA_intron_boundary i_start="91406" i_stop="92216" i_length="811"/>
          </intron>
          <exon e_serial="12" e_score="0.995">
            <gDNA_exon_boundary e_start="92217" e_stop="92408" e_length="192"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82675" stop="83042"/>
              <exon start="84901" stop="85023"/>
              <exon start="85180" stop="85317"/>
              <exon start="85396" stop="85475"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E348216" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82685" stop="83042"/>
              <exon start="84901" stop="84962"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E363863" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82988" stop="83042"/>
              <exon start="84901" stop="85023"/>
              <exon start="85180" stop="85317"/>
              <exon start="85396" stop="85481"/>
              <exon start="85973" stop="86060"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E421475" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="84901" stop="85023"/>
              <exon start="85180" stop="85317"/>
              <exon start="85396" stop="85481"/>
              <exon start="85973" stop="86026"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E329866" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="85188" stop="85317"/>
              <exon start="85396" stop="85481"/>
              <exon start="85973" stop="86060"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E457231" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="85308" stop="85317"/>
              <exon start="85396" stop="85481"/>
              <exon start="85973" stop="86060"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E407941" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="85426" stop="85481"/>
              <exon start="85973" stop="86060"/>
              <exon start="86443" stop="86518"/>
              <exon start="87554" stop="87636"/>
              <exon start="88766" stop="88836"/>
              <exon start="89344" stop="89421"/>
              <exon start="90582" stop="90669"/>
              <exon start="91289" stop="91405"/>
              <exon start="92217" stop="92408"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E726274" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="85458" stop="85481"/>
              <exon start="85973" stop="86060"/>
              <exon start="86443" stop="86518"/>
              <exon start="87554" stop="87636"/>
              <exon start="88766" stop="88836"/>
              <exon start="89344" stop="89421"/>
              <exon start="90582" stop="90669"/>
              <exon start="91289" stop="91365"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E206904" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="87562" stop="87636"/>
              <exon start="88766" stop="88836"/>
              <exon start="89344" stop="89421"/>
              <exon start="90582" stop="90669"/>
              <exon start="91289" stop="91405"/>
              <exon start="92217" stop="92320"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E293599" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TGTCTTTTTCTATACTCTATTTTCGATTCGCAAAGATGGATTCGACAGCAAGTCGGAGAACGGCATCAGGGAGATCGTCGGTGGTAGAGTCAATTAAAGGTTTTACTTTCGCCGGAGTTAGGATTTCCAAAGAGGATCTACGGAGGAGAATTACTATGCCGGAATATTTAAGGCTGGCCATAAGGGAGGCTATACAGAATAAGGATGTCGATACAGTAAGACGGCATCTCGATACGGCTTATGCCGCCGGCGCCGAGATTCCTCAGCCAGCGGAAGAGCCGATTATCGTCTTTATTAATTCTAAAAGTGGTGGAAGACATGGTCCACAGCTTAAAGCTAGGCTACAGGAACTCATGGGTGAAGAACAG : GTTTTTGACCTTTCAGATGTGAATCCTCATGAGTTTGTTCAATATGGATTGAGTTGCCTGGAGAAGTTTGCTGCTCTTGGTGACAGTTGTGCAAAAGTGACTCGTGAAAGGATAAGAGTCGTG : GCAGCAGGAGGTGATGGCACCGTTGGATGGATTCTTGGCTGCCTTGGAGATCTTAAGAAACAGGGCCGAGAACCAGTTCCACCAACAGGAATAATCCCACTTGGCACAGGAAATGACTTATCCAGGAGTTTTGGATGG : GGGGGCTCATTTCCTTTTAACTGGAAGTCAGCCACAAAAAGTATTCTTGATAGAGTTGCAACAGGTCCAATTAACCGTCTGGATAG : TTGGAATCTTCTAATATCAATGCCAGCTGGGGATAAACTGGAAACACCTCATTCTCTGAAATCTACTGAGGATGCATCTCTTGATCAG : GAACTGGAAATTGATAGCGAGTTGCCCAAGAAATTGTCCAACTATCAAGGAGTATACTACAATTACTTTAGCATAG : GAATGGATGCACAGGTAGCTTATGGCTTCCATCATTTACGGAATGAAAAACCATACCTTGCACAAGGTCCCATATCAAACAAG : TTGATTTACTCAGGATATAGTTGCACGCAAGGCTGGTTCTTTACACCATGTAGCAGTGACCCTTGTTTGAG : GGGATTGAATAATATTCTGCGACTGTATGTTAAGAAGGTCAACAGCTCAAAATGGGAGAAAATCTCTGTTCCTTCAAG : TGTTCGGTCAATAGTCACTCTTAATCTCCCTAGCTATGGCGGTGGAAGGAATCCATGGGGACGTTTGAAGCCAGAGTACTTGGAGAAG : AGGGGTTTTGTGGAAGCTCATGCAGATGATGGTTGCATTGAAATTTTTGGCCTGAAACAAGGATGGCATGCCTCTATGGTTATGGTTGAGCTCATTTCTGCAAAACACATTGCCCAG : GCTTCAGCAATTCGATTTGAGTTGCGTGCAGGAGAGTGGGATGAAGCTTATATGCAGATGGACGGTGAACCATGGAAACAACCAATTAGCAAGGAATATTCAACCTTCATTGAAATTAAGAGAGTACCATTTCAGTCTCTCATGGTTAACGGCAAGAGAAATTGATCTTGTAGTTATCTATATTCATGTAAA</gDNA_template>
            <first_frame> C  L  F  L  Y  S  I  F  D  S  Q  R  W  I  R  Q  Q  V  G  E  R  H  Q  G  D  R  R  W  *  S  Q  L  K  V  L  L  S  P  E  L  G  F  P  K  R  I  Y  G  G  E  L  L  C  R  N  I  *  G  W  P  *  G  R  L  Y  R  I  R  M  S  I  Q  *  D  G  I  S  I  R  L  M  P  P  A  P  R  F  L  S  Q  R  K  S  R  L  S  S  L  L  I  L  K  V  V  E  D  M  V  H  S  L  K  L  G  Y  R  N  S  W  V  K  N  R :   F  L  T  F  Q  M  *  I  L  M  S  L  F  N  M  D  *  V  A  W  R  S  L  L  L  L  V  T  V  V  Q  K  *  L  V  K  G  *  E  S  W :   Q  Q  E  V  M  A  P  L  D  G  F  L  A  A  L  E  I  L  R  N  R  A  E  N  Q  F  H  Q  Q  E  *  S  H  L  A  Q  E  M  T  Y  P  G  V  L  D  G :   G  A  H  F  L  L  T  G  S  Q  P  Q  K  V  F  L  I  E  L  Q  Q  V  Q  L  T  V  W  I   : V  G  I  F  *  Y  Q  C  Q  L  G  I  N  W  K  H  L  I  L  *  N  L  L  R  M  H  L  L  I  R :   N  W  K  L  I  A  S  C  P  R  N  C  P  T  I  K  E  Y  T  T  I  T  L  A  *  :  E  W  M  H  R  *  L  M  A  S  I  I  Y  G  M  K  N  H  T  L  H  K  V  P  Y  Q  T  S :   *  F  T  Q  D  I  V  A  R  K  A  G  S  L  H  H  V  A  V  T  L  V  *   : G  D  *  I  I  F  C  D  C  M  L  R  R  S  T  A  Q  N  G  R  K  S  L  F  L  Q   : V  F  G  Q  *  S  L  L  I  S  L  A  M  A  V  E  G  I  H  G  D  V  *  S  Q  S  T  W  R  R :   G  V  L  W  K  L  M  Q  M  M  V  A  L  K  F  L  A  *  N  K  D  G  M  P  L  W  L  W  L  S  S  F  L  Q  N  T  L  P  R :   L  Q  Q  F  D  L  S  C  V  Q  E  S  G  M  K  L  I  C  R  W  T  V  N  H  G  N  N  Q  L  A  R  N  I  Q  P  S  L  K  L  R  E  Y  H  F  S  L  S  W  L  T  A  R  E  I  D  L  V  V  I  Y  I  H  V   </first_frame>
            <second_frame>  V  F  F  Y  T  L  F  S  I  R  K  D  G  F  D  S  K  S  E  N  G  I  R  E  I  V  G  G  R  V  N  *  R  F  Y  F  R  R  S  *  D  F  Q  R  G  S  T  E  E  N  Y  Y  A  G  I  F  K  A  G  H  K  G  G  Y  T  E  *  G  C  R  Y  S  K  T  A  S  R  Y  G  L  C  R  R  R  R  D  S  S  A  S  G  R  A  D  Y  R  L  Y  *  F  *  K  W  W  K  T  W  S  T  A  *  S  *  A  T  G  T  H  G  *  R  T   : G  F  *  P  F  R  C  E  S  S  *  V  C  S  I  W  I  E  L  P  G  E  V  C  C  S  W  *  Q  L  C  K  S  D  S  *  K  D  K  S  R   : G  S  R  R  *  W  H  R  W  M  D  S  W  L  P  W  R  S  *  E  T  G  P  R  T  S  S  T  N  R  N  N  P  T  W  H  R  K  *  L  I  Q  E  F  W  M   : G  G  L  I  S  F  *  L  E  V  S  H  K  K  Y  S  *  *  S  C  N  R  S  N  *  P  S  G  *  :  L  E  S  S  N  I  N  A  S  W  G  *  T  G  N  T  S  F  S  E  I  Y  *  G  C  I  S  *  S   : G  T  G  N  *  *  R  V  A  Q  E  I  V  Q  L  S  R  S  I  L  Q  L  L  *  H  R :   N  G  C  T  G  S  L  W  L  P  S  F  T  E  *  K  T  I  P  C  T  R  S  H  I  K  Q   : V  D  L  L  R  I  *  L  H  A  R  L  V  L  Y  T  M  *  Q  *  P  L  F  E  :  G  I  E  *  Y  S  A  T  V  C  *  E  G  Q  Q  L  K  M  G  E  N  L  C  S  F  K  :  C  S  V  N  S  H  S  *  S  P  *  L  W  R  W  K  E  S  M  G  T  F  E  A  R  V  L  G  E   : E  G  F  C  G  S  S  C  R  *  W  L  H  *  N  F  W  P  E  T  R  M  A  C  L  Y  G  Y  G  *  A  H  F  C  K  T  H  C  P   : G  F  S  N  S  I  *  V  A  C  R  R  V  G  *  S  L  Y  A  D  G  R  *  T  M  E  T  T  N  *  Q  G  I  F  N  L  H  *  N  *  E  S  T  I  S  V  S  H  G  *  R  Q  E  K  L  I  L  *  L  S  I  F  M  *  </second_frame>
            <third_frame>   S  F  S  I  L  Y  F  R  F  A  K  M  D  S  T  A  S  R  R  T  A  S  G  R  S  S  V  V  E  S  I  K  G  F  T  F  A  G  V  R  I  S  K  E  D  L  R  R  R  I  T  M  P  E  Y  L  R  L  A  I  R  E  A  I  Q  N  K  D  V  D  T  V  R  R  H  L  D  T  A  Y  A  A  G  A  E  I  P  Q  P  A  E  E  P  I  I  V  F  I  N  S  K  S  G  G  R  H  G  P  Q  L  K  A  R  L  Q  E  L  M  G  E  E  Q  :  V  F  D  L  S  D  V  N  P  H  E  F  V  Q  Y  G  L  S  C  L  E  K  F  A  A  L  G  D  S  C  A  K  V  T  R  E  R  I  R  V  V  :  A  A  G  G  D  G  T  V  G  W  I  L  G  C  L  G  D  L  K  K  Q  G  R  E  P  V  P  P  T  G  I  I  P  L  G  T  G  N  D  L  S  R  S  F  G  W  :  G  G  S  F  P  F  N  W  K  S  A  T  K  S  I  L  D  R  V  A  T  G  P  I  N  R  L  D  S :   W  N  L  L  I  S  M  P  A  G  D  K  L  E  T  P  H  S  L  K  S  T  E  D  A  S  L  D  Q  :  E  L  E  I  D  S  E  L  P  K  K  L  S  N  Y  Q  G  V  Y  Y  N  Y  F  S  I   : G  M  D  A  Q  V  A  Y  G  F  H  H  L  R  N  E  K  P  Y  L  A  Q  G  P  I  S  N  K  :  L  I  Y  S  G  Y  S  C  T  Q  G  W  F  F  T  P  C  S  S  D  P  C  L  R :   G  L  N  N  I  L  R  L  Y  V  K  K  V  N  S  S  K  W  E  K  I  S  V  P  S  S :   V  R  S  I  V  T  L  N  L  P  S  Y  G  G  G  R  N  P  W  G  R  L  K  P  E  Y  L  E  K  :  R  G  F  V  E  A  H  A  D  D  G  C  I  E  I  F  G  L  K  Q  G  W  H  A  S  M  V  M  V  E  L  I  S  A  K  H  I  A  Q  :  A  S  A  I  R  F  E  L  R  A  G  E  W  D  E  A  Y  M  Q  M  D  G  E  P  W  K  Q  P  I  S  K  E  Y  S  T  F  I  E  I  K  R  V  P  F  Q  S  L  M  V  N  G  K  R  N  *  S  C  S  Y  L  Y  S  C  K </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06SLm0022H01.1" strand="+"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="82677" stop="83042"/>
                    <exon start="84901" stop="85023"/>
                    <exon start="85180" stop="85317"/>
                    <exon start="85396" stop="85481"/>
                    <exon start="85973" stop="86060"/>
                    <exon start="86443" stop="86518"/>
                    <exon start="87554" stop="87636"/>
                    <exon start="88766" stop="88836"/>
                    <exon start="89344" stop="89421"/>
                    <exon start="90582" stop="90669"/>
                    <exon start="91289" stop="91405"/>
                    <exon start="92217" stop="92381"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1476</number_coding_nucleotides>
                  <number_encoded_amino_acids>492</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SFSILYFRFAKMDSTASRRTASGRSSVVESIKGFTFAGVRISKEDLRRRITMPEYLRLAIREAIQNKDVDTVRRHLDTAYAAGAEIPQPAEEPIIVFINSKSGGRHGPQLKARLQELMGEEQVFDLSDVNPHEFVQYGLSCLEKFAALGDSCAKVTRERIRVVAAGGDGTVGWILGCLGDLKKQGREPVPPTGIIPLGTGNDLSRSFGWGGSFPFNWKSATKSILDRVATGPINRLDSWNLLISMPAGDKLETPHSLKSTEDASLDQELEIDSELPKKLSNYQGVYYNYFSIGMDAQVAYGFHHLRNEKPYLAQGPISNKLIYSGYSCTQGWFFTPCSSDPCLRGLNNILRLYVKKVNSSKWEKISVPSSVRSIVTLNLPSYGGGRNPWGRLKPEYLEKRGFVEAHADDGCIEIFGLKQGWHASMVMVELISAKHIAQASAIRFELRAGEWDEAYMQMDGEPWKQPISKEYSTFIEIKRVPFQSLMVNGKRN*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="82675" e_stop="83042"/>
            <exon e_start="84901" e_stop="85023"/>
            <exon e_start="85180" e_stop="85317"/>
            <exon e_start="85396" e_stop="85481"/>
            <exon e_start="85973" e_stop="86060"/>
            <exon e_start="86443" e_stop="86518"/>
            <exon e_start="87554" e_stop="87642"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.986" e_score="1.000"/>
          <exon-intron don_prob="0.972" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.975" e_score="1.000"/>
          <exon-intron don_prob="0.930" acc_prob="0.971" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="1.000" e_score="0.966"/>
          <exon-intron don_prob="0.068" acc_prob="0.999" e_score="0.934"/>
          <exon-only e_score="0.944"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="82675" e_stop="83042" e_length="368"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.986">
            <gDNA_intron_boundary i_start="83043" i_stop="84900" i_length="1858"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="84901" e_stop="85023" e_length="123"/>
          </exon>
          <intron i_serial="2" don_prob="0.972" acc_prob="0.997">
            <gDNA_intron_boundary i_start="85024" i_stop="85179" i_length="156"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="85180" e_stop="85317" e_length="138"/>
          </exon>
          <intron i_serial="3" don_prob="0.998" acc_prob="0.975">
            <gDNA_intron_boundary i_start="85318" i_stop="85395" i_length="78"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="85396" e_stop="85481" e_length="86"/>
          </exon>
          <intron i_serial="4" don_prob="0.930" acc_prob="0.971">
            <gDNA_intron_boundary i_start="85482" i_stop="85972" i_length="491"/>
          </intron>
          <exon e_serial="5" e_score="0.966">
            <gDNA_exon_boundary e_start="85973" e_stop="86060" e_length="88"/>
          </exon>
          <intron i_serial="5" don_prob="0.998" acc_prob="1.000">
            <gDNA_intron_boundary i_start="86061" i_stop="86442" i_length="382"/>
          </intron>
          <exon e_serial="6" e_score="0.934">
            <gDNA_exon_boundary e_start="86443" e_stop="86518" e_length="76"/>
          </exon>
          <intron i_serial="6" don_prob="0.068" acc_prob="0.999">
            <gDNA_intron_boundary i_start="86519" i_stop="87553" i_length="1035"/>
          </intron>
          <exon e_serial="7" e_score="0.944">
            <gDNA_exon_boundary e_start="87554" e_stop="87642" e_length="89"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82675" stop="83042"/>
              <exon start="84901" stop="85023"/>
              <exon start="85180" stop="85317"/>
              <exon start="85396" stop="85475"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E348216" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82685" stop="83042"/>
              <exon start="84901" stop="84962"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E363863" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82981" stop="83042"/>
              <exon start="84901" stop="85023"/>
              <exon start="85180" stop="85317"/>
              <exon start="85396" stop="85481"/>
              <exon start="85973" stop="86060"/>
              <exon start="86443" stop="86518"/>
              <exon start="87554" stop="87642"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E617168" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82988" stop="83042"/>
              <exon start="84901" stop="85023"/>
              <exon start="85180" stop="85317"/>
              <exon start="85396" stop="85481"/>
              <exon start="85973" stop="86060"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E421475" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="84901" stop="85023"/>
              <exon start="85180" stop="85317"/>
              <exon start="85396" stop="85481"/>
              <exon start="85973" stop="86026"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E329866" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="85188" stop="85317"/>
              <exon start="85396" stop="85481"/>
              <exon start="85973" stop="86060"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E457231" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="85308" stop="85317"/>
              <exon start="85396" stop="85481"/>
              <exon start="85973" stop="86060"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E407941" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TGTCTTTTTCTATACTCTATTTTCGATTCGCAAAGATGGATTCGACAGCAAGTCGGAGAACGGCATCAGGGAGATCGTCGGTGGTAGAGTCAATTAAAGGTTTTACTTTCGCCGGAGTTAGGATTTCCAAAGAGGATCTACGGAGGAGAATTACTATGCCGGAATATTTAAGGCTGGCCATAAGGGAGGCTATACAGAATAAGGATGTCGATACAGTAAGACGGCATCTCGATACGGCTTATGCCGCCGGCGCCGAGATTCCTCAGCCAGCGGAAGAGCCGATTATCGTCTTTATTAATTCTAAAAGTGGTGGAAGACATGGTCCACAGCTTAAAGCTAGGCTACAGGAACTCATGGGTGAAGAACAG : GTTTTTGACCTTTCAGATGTGAATCCTCATGAGTTTGTTCAATATGGATTGAGTTGCCTGGAGAAGTTTGCTGCTCTTGGTGACAGTTGTGCAAAAGTGACTCGTGAAAGGATAAGAGTCGTG : GCAGCAGGAGGTGATGGCACCGTTGGATGGATTCTTGGCTGCCTTGGAGATCTTAAGAAACAGGGCCGAGAACCAGTTCCACCAACAGGAATAATCCCACTTGGCACAGGAAATGACTTATCCAGGAGTTTTGGATGG : GGGGGCTCATTTCCTTTTAACTGGAAGTCAGCCACAAAAAGTATTCTTGATAGAGTTGCAACAGGTCCAATTAACCGTCTGGATAG : TTGGAATCTTCTAATATCAATGCCAGCTGGGGATAAACTGGAAACACCTCATTCTCTGAAATCTACTGAGGATGCATCTCTTGATCAG : GAACTGGAAATTGATAGCGAGTTGCCCAAGAAATTGTCCAACTATCAAGGAGTATACTACAATTACTTTAGCATAG : GAATGGATGCACAGGTAGCTTATGGCTTCCATCATTTACGGAATGAAAAACCATACCTTGCACAAGGTCCCATATCAAACAAGGTTGAT</gDNA_template>
            <first_frame> C  L  F  L  Y  S  I  F  D  S  Q  R  W  I  R  Q  Q  V  G  E  R  H  Q  G  D  R  R  W  *  S  Q  L  K  V  L  L  S  P  E  L  G  F  P  K  R  I  Y  G  G  E  L  L  C  R  N  I  *  G  W  P  *  G  R  L  Y  R  I  R  M  S  I  Q  *  D  G  I  S  I  R  L  M  P  P  A  P  R  F  L  S  Q  R  K  S  R  L  S  S  L  L  I  L  K  V  V  E  D  M  V  H  S  L  K  L  G  Y  R  N  S  W  V  K  N  R :   F  L  T  F  Q  M  *  I  L  M  S  L  F  N  M  D  *  V  A  W  R  S  L  L  L  L  V  T  V  V  Q  K  *  L  V  K  G  *  E  S  W :   Q  Q  E  V  M  A  P  L  D  G  F  L  A  A  L  E  I  L  R  N  R  A  E  N  Q  F  H  Q  Q  E  *  S  H  L  A  Q  E  M  T  Y  P  G  V  L  D  G :   G  A  H  F  L  L  T  G  S  Q  P  Q  K  V  F  L  I  E  L  Q  Q  V  Q  L  T  V  W  I   : V  G  I  F  *  Y  Q  C  Q  L  G  I  N  W  K  H  L  I  L  *  N  L  L  R  M  H  L  L  I  R :   N  W  K  L  I  A  S  C  P  R  N  C  P  T  I  K  E  Y  T  T  I  T  L  A  *  :  E  W  M  H  R  *  L  M  A  S  I  I  Y  G  M  K  N  H  T  L  H  K  V  P  Y  Q  T  R  L   </first_frame>
            <second_frame>  V  F  F  Y  T  L  F  S  I  R  K  D  G  F  D  S  K  S  E  N  G  I  R  E  I  V  G  G  R  V  N  *  R  F  Y  F  R  R  S  *  D  F  Q  R  G  S  T  E  E  N  Y  Y  A  G  I  F  K  A  G  H  K  G  G  Y  T  E  *  G  C  R  Y  S  K  T  A  S  R  Y  G  L  C  R  R  R  R  D  S  S  A  S  G  R  A  D  Y  R  L  Y  *  F  *  K  W  W  K  T  W  S  T  A  *  S  *  A  T  G  T  H  G  *  R  T   : G  F  *  P  F  R  C  E  S  S  *  V  C  S  I  W  I  E  L  P  G  E  V  C  C  S  W  *  Q  L  C  K  S  D  S  *  K  D  K  S  R   : G  S  R  R  *  W  H  R  W  M  D  S  W  L  P  W  R  S  *  E  T  G  P  R  T  S  S  T  N  R  N  N  P  T  W  H  R  K  *  L  I  Q  E  F  W  M   : G  G  L  I  S  F  *  L  E  V  S  H  K  K  Y  S  *  *  S  C  N  R  S  N  *  P  S  G  *  :  L  E  S  S  N  I  N  A  S  W  G  *  T  G  N  T  S  F  S  E  I  Y  *  G  C  I  S  *  S   : G  T  G  N  *  *  R  V  A  Q  E  I  V  Q  L  S  R  S  I  L  Q  L  L  *  H  R :   N  G  C  T  G  S  L  W  L  P  S  F  T  E  *  K  T  I  P  C  T  R  S  H  I  K  Q  G  *  </second_frame>
            <third_frame>   S  F  S  I  L  Y  F  R  F  A  K  M  D  S  T  A  S  R  R  T  A  S  G  R  S  S  V  V  E  S  I  K  G  F  T  F  A  G  V  R  I  S  K  E  D  L  R  R  R  I  T  M  P  E  Y  L  R  L  A  I  R  E  A  I  Q  N  K  D  V  D  T  V  R  R  H  L  D  T  A  Y  A  A  G  A  E  I  P  Q  P  A  E  E  P  I  I  V  F  I  N  S  K  S  G  G  R  H  G  P  Q  L  K  A  R  L  Q  E  L  M  G  E  E  Q  :  V  F  D  L  S  D  V  N  P  H  E  F  V  Q  Y  G  L  S  C  L  E  K  F  A  A  L  G  D  S  C  A  K  V  T  R  E  R  I  R  V  V  :  A  A  G  G  D  G  T  V  G  W  I  L  G  C  L  G  D  L  K  K  Q  G  R  E  P  V  P  P  T  G  I  I  P  L  G  T  G  N  D  L  S  R  S  F  G  W  :  G  G  S  F  P  F  N  W  K  S  A  T  K  S  I  L  D  R  V  A  T  G  P  I  N  R  L  D  S :   W  N  L  L  I  S  M  P  A  G  D  K  L  E  T  P  H  S  L  K  S  T  E  D  A  S  L  D  Q  :  E  L  E  I  D  S  E  L  P  K  K  L  S  N  Y  Q  G  V  Y  Y  N  Y  F  S  I   : G  M  D  A  Q  V  A  Y  G  F  H  H  L  R  N  E  K  P  Y  L  A  Q  G  P  I  S  N  K  V  D </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06SLm0022H01.1" strand="+"/>
                <serials PGL_serial="8" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="82677" stop="83042"/>
                    <exon start="84901" stop="85023"/>
                    <exon start="85180" stop="85317"/>
                    <exon start="85396" stop="85481"/>
                    <exon start="85973" stop="86060"/>
                    <exon start="86443" stop="86518"/>
                    <exon start="87554" stop="87642"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>966</number_coding_nucleotides>
                  <number_encoded_amino_acids>322</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SFSILYFRFAKMDSTASRRTASGRSSVVESIKGFTFAGVRISKEDLRRRITMPEYLRLAIREAIQNKDVDTVRRHLDTAYAAGAEIPQPAEEPIIVFINSKSGGRHGPQLKARLQELMGEEQVFDLSDVNPHEFVQYGLSCLEKFAALGDSCAKVTRERIRVVAAGGDGTVGWILGCLGDLKKQGREPVPPTGIIPLGTGNDLSRSFGWGGSFPFNWKSATKSILDRVATGPINRLDSWNLLISMPAGDKLETPHSLKSTEDASLDQELEIDSELPKKLSNYQGVYYNYFSIGMDAQVAYGFHHLRNEKPYLAQGPISNKVD</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="86434" e_stop="86518"/>
            <exon e_start="87554" e_stop="87636"/>
            <exon e_start="88766" e_stop="88836"/>
            <exon e_start="89344" e_stop="89421"/>
            <exon e_start="90582" e_stop="90669"/>
            <exon e_start="91289" e_stop="91405"/>
            <exon e_start="92217" e_stop="92385"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.068" acc_prob="0.999" e_score="0.906"/>
          <exon-intron don_prob="0.919" acc_prob="0.140" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.949" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.900" acc_prob="0.991" e_score="1.000"/>
          <exon-intron don_prob="0.988" acc_prob="1.000" e_score="1.000"/>
          <exon-only e_score="0.970"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.906">
            <gDNA_exon_boundary e_start="86434" e_stop="86518" e_length="85"/>
          </exon>
          <intron i_serial="1" don_prob="0.068" acc_prob="0.999">
            <gDNA_intron_boundary i_start="86519" i_stop="87553" i_length="1035"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="87554" e_stop="87636" e_length="83"/>
          </exon>
          <intron i_serial="2" don_prob="0.919" acc_prob="0.140">
            <gDNA_intron_boundary i_start="87637" i_stop="88765" i_length="1129"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="88766" e_stop="88836" e_length="71"/>
          </exon>
          <intron i_serial="3" don_prob="0.991" acc_prob="0.998">
            <gDNA_intron_boundary i_start="88837" i_stop="89343" i_length="507"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="89344" e_stop="89421" e_length="78"/>
          </exon>
          <intron i_serial="4" don_prob="0.949" acc_prob="0.998">
            <gDNA_intron_boundary i_start="89422" i_stop="90581" i_length="1160"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="90582" e_stop="90669" e_length="88"/>
          </exon>
          <intron i_serial="5" don_prob="0.900" acc_prob="0.991">
            <gDNA_intron_boundary i_start="90670" i_stop="91288" i_length="619"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="91289" e_stop="91405" e_length="117"/>
          </exon>
          <intron i_serial="6" don_prob="0.988" acc_prob="1.000">
            <gDNA_intron_boundary i_start="91406" i_stop="92216" i_length="811"/>
          </intron>
          <exon e_serial="7" e_score="0.970">
            <gDNA_exon_boundary e_start="92217" e_stop="92385" e_length="169"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="86434" stop="86518"/>
              <exon start="87554" stop="87636"/>
              <exon start="88766" stop="88836"/>
              <exon start="89344" stop="89421"/>
              <exon start="90582" stop="90669"/>
              <exon start="91289" stop="91405"/>
              <exon start="92217" stop="92385"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E408732" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="87562" stop="87636"/>
              <exon start="88766" stop="88836"/>
              <exon start="89344" stop="89421"/>
              <exon start="90582" stop="90669"/>
              <exon start="91289" stop="91405"/>
              <exon start="92217" stop="92320"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E293599" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="3" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GTTGTGCAGGAACTGGAAATTGATAGCGAGTTGCCCAAGAAATTGTCCAACTATCAAGGAGTATACTACAATTACTTTAGCATAG : GAATGGATGCACAGGTAGCTTATGGCTTCCATCATTTACGGAATGAAAAACCATACCTTGCACAAGGTCCCATATCAAACAAG : TTGATTTACTCAGGATATAGTTGCACGCAAGGCTGGTTCTTTACACCATGTAGCAGTGACCCTTGTTTGAG : GGGATTGAATAATATTCTGCGACTGTATGTTAAGAAGGTCAACAGCTCAAAATGGGAGAAAATCTCTGTTCCTTCAAG : TGTTCGGTCAATAGTCACTCTTAATCTCCCTAGCTATGGCGGTGGAAGGAATCCATGGGGACGTTTGAAGCCAGAGTACTTGGAGAAG : AGGGGTTTTGTGGAAGCTCATGCAGATGATGGTTGCATTGAAATTTTTGGCCTGAAACAAGGATGGCATGCCTCTATGGTTATGGTTGAGCTCATTTCTGCAAAACACATTGCCCAG : GCTTCAGCAATTCGATTTGAGTTGCGTGCAGGAGAGTGGGATGAAGCTTATATGCAGATGGACGGTGAACCATGGAAACAACCAATTAGCAAGGAATATTCAACCTTCATTGAAATTAAGAGAGTACCATTTCAGTCTCTCATGGTTAACGGCAAGAGAAATTGATCTT</gDNA_template>
            <first_frame> V  V  Q  E  L  E  I  D  S  E  L  P  K  K  L  S  N  Y  Q  G  V  Y  Y  N  Y  F  S  I   : G  M  D  A  Q  V  A  Y  G  F  H  H  L  R  N  E  K  P  Y  L  A  Q  G  P  I  S  N  K  :  L  I  Y  S  G  Y  S  C  T  Q  G  W  F  F  T  P  C  S  S  D  P  C  L  R :   G  L  N  N  I  L  R  L  Y  V  K  K  V  N  S  S  K  W  E  K  I  S  V  P  S  S :   V  R  S  I  V  T  L  N  L  P  S  Y  G  G  G  R  N  P  W  G  R  L  K  P  E  Y  L  E  K  :  R  G  F  V  E  A  H  A  D  D  G  C  I  E  I  F  G  L  K  Q  G  W  H  A  S  M  V  M  V  E  L  I  S  A  K  H  I  A  Q  :  A  S  A  I  R  F  E  L  R  A  G  E  W  D  E  A  Y  M  Q  M  D  G  E  P  W  K  Q  P  I  S  K  E  Y  S  T  F  I  E  I  K  R  V  P  F  Q  S  L  M  V  N  G  K  R  N  *  S  </first_frame>
            <second_frame>  L  C  R  N  W  K  L  I  A  S  C  P  R  N  C  P  T  I  K  E  Y  T  T  I  T  L  A  *  :  E  W  M  H  R  *  L  M  A  S  I  I  Y  G  M  K  N  H  T  L  H  K  V  P  Y  Q  T  S :   *  F  T  Q  D  I  V  A  R  K  A  G  S  L  H  H  V  A  V  T  L  V  *   : G  D  *  I  I  F  C  D  C  M  L  R  R  S  T  A  Q  N  G  R  K  S  L  F  L  Q   : V  F  G  Q  *  S  L  L  I  S  L  A  M  A  V  E  G  I  H  G  D  V  *  S  Q  S  T  W  R  R :   G  V  L  W  K  L  M  Q  M  M  V  A  L  K  F  L  A  *  N  K  D  G  M  P  L  W  L  W  L  S  S  F  L  Q  N  T  L  P  R :   L  Q  Q  F  D  L  S  C  V  Q  E  S  G  M  K  L  I  C  R  W  T  V  N  H  G  N  N  Q  L  A  R  N  I  Q  P  S  L  K  L  R  E  Y  H  F  S  L  S  W  L  T  A  R  E  I  D  L </second_frame>
            <third_frame>   C  A  G  T  G  N  *  *  R  V  A  Q  E  I  V  Q  L  S  R  S  I  L  Q  L  L  *  H  R :   N  G  C  T  G  S  L  W  L  P  S  F  T  E  *  K  T  I  P  C  T  R  S  H  I  K  Q   : V  D  L  L  R  I  *  L  H  A  R  L  V  L  Y  T  M  *  Q  *  P  L  F  E  :  G  I  E  *  Y  S  A  T  V  C  *  E  G  Q  Q  L  K  M  G  E  N  L  C  S  F  K  :  C  S  V  N  S  H  S  *  S  P  *  L  W  R  W  K  E  S  M  G  T  F  E  A  R  V  L  G  E   : E  G  F  C  G  S  S  C  R  *  W  L  H  *  N  F  W  P  E  T  R  M  A  C  L  Y  G  Y  G  *  A  H  F  C  K  T  H  C  P   : G  F  S  N  S  I  *  V  A  C  R  R  V  G  *  S  L  Y  A  D  G  R  *  T  M  E  T  T  N  *  Q  G  I  F  N  L  H  *  N  *  E  S  T  I  S  V  S  H  G  *  R  Q  E  K  L  I   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06SLm0022H01.1" strand="+"/>
                <serials PGL_serial="8" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="86434" stop="86518"/>
                    <exon start="87554" stop="87636"/>
                    <exon start="88766" stop="88836"/>
                    <exon start="89344" stop="89421"/>
                    <exon start="90582" stop="90669"/>
                    <exon start="91289" stop="91405"/>
                    <exon start="92217" stop="92381"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>684</number_coding_nucleotides>
                  <number_encoded_amino_acids>228</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VVQELEIDSELPKKLSNYQGVYYNYFSIGMDAQVAYGFHHLRNEKPYLAQGPISNKLIYSGYSCTQGWFFTPCSSDPCLRGLNNILRLYVKKVNSSKWEKISVPSSVRSIVTLNLPSYGGGRNPWGRLKPEYLEKRGFVEAHADDGCIEIFGLKQGWHASMVMVELISAKHIAQASAIRFELRAGEWDEAYMQMDGEPWKQPISKEYSTFIEIKRVPFQSLMVNGKRN*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="+" PGL_start="93138" PGL_stop="95036"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="93138" e_stop="93460"/>
            <exon e_start="93737" e_stop="93823"/>
            <exon e_start="94716" e_stop="95036"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.723" e_score="1.000"/>
          <exon-intron don_prob="0.983" acc_prob="0.998" e_score="1.000"/>
          <exon-only e_score="0.981"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="93138" e_stop="93460" e_length="323"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.723">
            <gDNA_intron_boundary i_start="93461" i_stop="93736" i_length="276"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="93737" e_stop="93823" e_length="87"/>
          </exon>
          <intron i_serial="2" don_prob="0.983" acc_prob="0.998">
            <gDNA_intron_boundary i_start="93824" i_stop="94715" i_length="892"/>
          </intron>
          <exon e_serial="3" e_score="0.981">
            <gDNA_exon_boundary e_start="94716" e_stop="95036" e_length="321"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="93138" stop="93460"/>
              <exon start="93737" stop="93823"/>
              <exon start="94716" stop="95036"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E689452" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="93142" stop="93460"/>
              <exon start="93737" stop="93823"/>
              <exon start="94716" stop="95035"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E333582" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GTTTAAGAATGCAGGCCAAATCCTCCTTTTATGTTCTCATCCTCCTCAGAAGGTTTGATTACCAACGCTAATTTTAAGAATCCATATGGTTCGTTCCGTTTTCAAATCGTTTCTAAATCTTCCTAAATCTATCTCCATATTAACACCTTCTGTTTATCGCCCAAATTCGATCTCCATCTCTAGCTCATACTCAACTCCAAGAATTAGCAAGAGAATTGGCTCATTCTTTTCTGCACCCGTTGGTGAGCAATTTCAAGAATTTGGGTCGTTATTTTCAGCTAAATACAGCACAAATGGCTATCTTCTCCCTCCCAACTTCATAA : ATGTGGTTGGTTGTTTATATGGAATCGGTGATATGGAAAGCTTGTGCGAACCGGGAAAAAAGGGAAACTCTACATTGTTACAAATTA : GGTCATAAATAATGGGTAGCAGAAGTGCAATTTCTGGGAGTGGTAGATCACCCAAATCTTGACAAACTTGGAAATTGTGATGTTGGCTTATTTGCATGAAGAATTGGAAGTTCAGGTATTTTATCTGAATATTTTTTGATGTATTTGTCTAAACTTTTCATAAATATATATTGCAAGTGTGTGAACTCTTAGTTGGATTTCTATTTTCTTCAATGTATAACCCAATTGTGGCGTATTGCTTGATGTTGAAGGTATATAATCATTGATATGGCTTCACCTTTGTGGCCTAAAAATGTTAAAGCAGAGTTTTTCTATATGTTT</gDNA_template>
            <first_frame> V  *  E  C  R  P  N  P  P  F  M  F  S  S  S  S  E  G  L  I  T  N  A  N  F  K  N  P  Y  G  S  F  R  F  Q  I  V  S  K  S  S  *  I  Y  L  H  I  N  T  F  C  L  S  P  K  F  D  L  H  L  *  L  I  L  N  S  K  N  *  Q  E  N  W  L  I  L  F  C  T  R  W  *  A  I  S  R  I  W  V  V  I  F  S  *  I  Q  H  K  W  L  S  S  P  S  Q  L  H  K :   C  G  W  L  F  I  W  N  R  *  Y  G  K  L  V  R  T  G  K  K  G  K  L  Y  I  V  T  N  * :   V  I  N  N  G  *  Q  K  C  N  F  W  E  W  *  I  T  Q  I  L  T  N  L  E  I  V  M  L  A  Y  L  H  E  E  L  E  V  Q  V  F  Y  L  N  I  F  *  C  I  C  L  N  F  S  *  I  Y  I  A  S  V  *  T  L  S  W  I  S  I  F  F  N  V  *  P  N  C  G  V  L  L  D  V  E  G  I  *  S  L  I  W  L  H  L  C  G  L  K  M  L  K  Q  S  F  S  I  C   </first_frame>
            <second_frame>  F  K  N  A  G  Q  I  L  L  L  C  S  H  P  P  Q  K  V  *  L  P  T  L  I  L  R  I  H  M  V  R  S  V  F  K  S  F  L  N  L  P  K  S  I  S  I  L  T  P  S  V  Y  R  P  N  S  I  S  I  S  S  S  Y  S  T  P  R  I  S  K  R  I  G  S  F  F  S  A  P  V  G  E  Q  F  Q  E  F  G  S  L  F  S  A  K  Y  S  T  N  G  Y  L  L  P  P  N  F  I   : N  V  V  G  C  L  Y  G  I  G  D  M  E  S  L  C  E  P  G  K  K  G  N  S  T  L  L  Q  I   : R  S  *  I  M  G  S  R  S  A  I  S  G  S  G  R  S  P  K  S  *  Q  T  W  K  L  *  C  W  L  I  C  M  K  N  W  K  F  R  Y  F  I  *  I  F  F  D  V  F  V  *  T  F  H  K  Y  I  L  Q  V  C  E  L  L  V  G  F  L  F  S  S  M  Y  N  P  I  V  A  Y  C  L  M  L  K  V  Y  N  H  *  Y  G  F  T  F  V  A  *  K  C  *  S  R  V  F  L  Y  V  </second_frame>
            <third_frame>   L  R  M  Q  A  K  S  S  F  Y  V  L  I  L  L  R  R  F  D  Y  Q  R  *  F  *  E  S  I  W  F  V  P  F  S  N  R  F  *  I  F  L  N  L  S  P  Y  *  H  L  L  F  I  A  Q  I  R  S  P  S  L  A  H  T  Q  L  Q  E  L  A  R  E  L  A  H  S  F  L  H  P  L  V  S  N  F  K  N  L  G  R  Y  F  Q  L  N  T  A  Q  M  A  I  F  S  L  P  T  S  *  :  M  W  L  V  V  Y  M  E  S  V  I  W  K  A  C  A  N  R  E  K  R  E  T  L  H  C  Y  K  L  :  G  H  K  *  W  V  A  E  V  Q  F  L  G  V  V  D  H  P  N  L  D  K  L  G  N  C  D  V  G  L  F  A  *  R  I  G  S  S  G  I  L  S  E  Y  F  L  M  Y  L  S  K  L  F  I  N  I  Y  C  K  C  V  N  S  *  L  D  F  Y  F  L  Q  C  I  T  Q  L  W  R  I  A  *  C  *  R  Y  I  I  I  D  M  A  S  P  L  W  P  K  N  V  K  A  E  F  F  Y  M  F </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06SLm0022H01.1" strand="+"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="93196" stop="93460"/>
                    <exon start="93737" stop="93823"/>
                    <exon start="94716" stop="94723"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>357</number_coding_nucleotides>
                  <number_encoded_amino_acids>119</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LPTLILRIHMVRSVFKSFLNLPKSISILTPSVYRPNSISISSSYSTPRISKRIGSFFSAPVGEQFQEFGSLFSAKYSTNGYLLPPNFINVVGCLYGIGDMESLCEPGKKGNSTLLQIRS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="93328" e_stop="93823"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.996"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.996">
            <gDNA_exon_boundary e_start="93328" e_stop="93823" e_length="496"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="93328" stop="93823"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E298197" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TCAACTCCAAGAATTAGCAAGAGAATTGGCTCATTCTTTTCTGCACCCGTTGGTGAGCAATTTCAAGAATTTGGGTCGTTATTTTCAGCTAAATACAGCACAAATGGCTATCTTCTCCCTCCCAACTTCATAAGTAAGTAGCCAATCTTCTCCTTCCCAACTTCATAAGTTTCATAAGGTATGTATTATGTTTTGATGTAAGGTTTCTGTTTTGATCTTCATGATTTGTAATTGTCATGTTTTTAATTTGTATTAATCTTAATTGATTTTTGTGGCCTTTCATATCCTAATTCTTCTTATATATATAAAATAATAGTGTTTTATCAAGTCGATATTTATATATAGTGTGTTTCACGAAAAATTTTAATTGACTACCTCATTTTTAGCAAAACGTCTTCCTCATCTGTAGATGTGGTTGGTTGTTTATATGGAATCGGTGATATGGAAAGCTTGTGCGAACCGGGAAAAAAGGGAAACTCTACATTGTTACAAATTA</gDNA_template>
            <first_frame> S  T  P  R  I  S  K  R  I  G  S  F  F  S  A  P  V  G  E  Q  F  Q  E  F  G  S  L  F  S  A  K  Y  S  T  N  G  Y  L  L  P  P  N  F  I  S  K  *  P  I  F  S  F  P  T  S  *  V  S  *  G  M  Y  Y  V  L  M  *  G  F  C  F  D  L  H  D  L  *  L  S  C  F  *  F  V  L  I  L  I  D  F  C  G  L  S  Y  P  N  S  S  Y  I  Y  K  I  I  V  F  Y  Q  V  D  I  Y  I  *  C  V  S  R  K  I  L  I  D  Y  L  I  F  S  K  T  S  S  S  S  V  D  V  V  G  C  L  Y  G  I  G  D  M  E  S  L  C  E  P  G  K  K  G  N  S  T  L  L  Q  I  </first_frame>
            <second_frame>  Q  L  Q  E  L  A  R  E  L  A  H  S  F  L  H  P  L  V  S  N  F  K  N  L  G  R  Y  F  Q  L  N  T  A  Q  M  A  I  F  S  L  P  T  S  *  V  S  S  Q  S  S  P  S  Q  L  H  K  F  H  K  V  C  I  M  F  *  C  K  V  S  V  L  I  F  M  I  C  N  C  H  V  F  N  L  Y  *  S  *  L  I  F  V  A  F  H  I  L  I  L  L  I  Y  I  K  *  *  C  F  I  K  S  I  F  I  Y  S  V  F  H  E  K  F  *  L  T  T  S  F  L  A  K  R  L  P  H  L  *  M  W  L  V  V  Y  M  E  S  V  I  W  K  A  C  A  N  R  E  K  R  E  T  L  H  C  Y  K  L </second_frame>
            <third_frame>   N  S  K  N  *  Q  E  N  W  L  I  L  F  C  T  R  W  *  A  I  S  R  I  W  V  V  I  F  S  *  I  Q  H  K  W  L  S  S  P  S  Q  L  H  K  *  V  A  N  L  L  L  P  N  F  I  S  F  I  R  Y  V  L  C  F  D  V  R  F  L  F  *  S  S  *  F  V  I  V  M  F  L  I  C  I  N  L  N  *  F  L  W  P  F  I  S  *  F  F  L  Y  I  *  N  N  S  V  L  S  S  R  Y  L  Y  I  V  C  F  T  K  N  F  N  *  L  P  H  F  *  Q  N  V  F  L  I  C  R  C  G  W  L  F  I  W  N  R  *  Y  G  K  L  V  R  T  G  K  K  G  K  L  Y  I  V  T  N   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C06SLm0022H01.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="+" PGL_start="95759" PGL_stop="97869"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="95759" e_stop="97869"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.997">
            <gDNA_exon_boundary e_start="95759" e_stop="97869" e_length="2111"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="95759" stop="96446"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E379839" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="95759" stop="96343"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E375333" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="95759" stop="96158"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E204726" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="96421" stop="96975"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E250164" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="96752" stop="97172"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E244240" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="97077" stop="97773"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E379115" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="97261" stop="97869"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E375332" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGACACACACAATGCATAATAACAATAGTCTATGAAGTGAGTTGAGAACCATGAGTTCTCACGCTCAAGAAGCTGCAAATTAAGTTAGAACATTGTCTTGCTATCTTCATAATCAAGTTATCATAACGTCCATTCATACACATATATATGCGCGAAAAATAGTGATGAACCTAATATTTGTTCCCTCATAAAACCATCTCTTACTGTATTGTACTCTGAACAAAAAAGTATTCTATGAAATTCAGTACAACAAAGTACTCTAGGAAATTAGTAATTTACAAGATGTATGTAAGTCCTAATAAAAAAAATGTACAAAGCATATCATACTGTGTTAACTTCAATCCCAACAACTGATTCAGAATCTGCTGCATACGTGTAGCTCTGATTATTAATATGGATGGGGAGGAATAACACAGATACGATTAACGGATTAAGAACAGAACCTGCTACTCTAAATTTTAGATTCGTCACTGATTCAACACGCATATATATATATACCAAGAGTGCTCCAATAAAGACAAGTCACAAGTCTGTTTTGCTTCCAAGGCAGCTTATTTAAATCGAAAGAGACTACAAAATTTCTTCCATTACTAATCTCTTCCTAAATCTAATAAGATTCTGTGGAATAGTATTCTCAACAAACATTCACCCTCTTCCAAAAGTTATATTCTAGATAGTGTGCAAGGAAAGACAAATGGGACGATTGTAAAATTACAAATCAAATTATTTTGAGGAGTATCAAATAATAATAATAACGTTGTTCTAATAAATGCTGCACCTACTGAAAAGCCATAACAGATTTGATTTTTGTTTTTTGTTCAAATTTGGTTTGGGCTAATAACATAATACTGGATCAATGACGCTAAAAGCCTAAAAATAGCTTGTGGTTTTCGAAGTATAGGTAAGGGCAAACCAAATAAAAATAATAATTTGTTCATTTTCTTTTTTGCTTCTCTTTTGTAGTTTTTTGAGATTTTTTTTCTTATTCTTGTAGTTTCTACCGACACTGATTGTCTTTATTCACTTTGTAAATTTGAAGAATCAAATTATGTTATGTTGAGAACATGATCTTCATGCTAAAAGTCTTCTTTGAATGCCTATATCCTGGCGGTTTTGGATAATGTTATGTTGAGATCGATGATTATAATTCTTTTCCTTGGAATTGTATTCATTTGGCTTTGGCTATAATTCTTTTTCCTTGATTAATGTGATGTCATGTTCTTTAACTAACTGCTTCCTATTCTAGCTCTCTGCTTTACTTTCTGACATAGGGATTAATATCCGAGAAGCTCATGTTTTCTCAACAATTGATGGGTACTCATTAGATGTATTTGTGGTGGATGGATGGCCTGTTGAGGTATGCTCTGTGTTGCTCACCATTTTTAGTAGGTTTGATGTACATATTCTAGCATCTTGTTTCATATCAGTGTTTCTACATTACCACTTACTTTTGTGTGAGTTCTCTGGTGGGTCTTCTTAATTTAATAGATTTCAGTTTCGGGGTTTAAAGAACGAATGATTTAGGGATTATATGATTGTAATCTTAATTTAGTCTCTCAACATGTTTGCGCATCGCGCGATCCTAACAACTATTTTAAAAATAATGACCCTGAATACTTTGACATTGAGGTGTATATAGGGAACCAACGGATTGACCAAACAGATGGTAATTACATTTAATGTTAAAATTCAAATAATTTTAAGGATTAACATGTTTAATAAATATGTTGATAAATTTACTTTTTGAAGAACAATCAGGTATCTGTTGATGTGTTATTGACTGACTTGGAAGATTATGAGGATGAAGTACATGTAACTAATGGTGCTAAGAGTAGAAAACGAAGAAACCTAATCATAGATGATGAGGAATTAAGCATTCAAGACACAAATAAGGTCAAGAAGTAAAGGGATAATTGTTGGTCATAAATGACGAGGAATAAGTGTTCATCACACAAATAAGTTGAAGATGTAGAGGGATAATTGTTGCTTCTGATTGTTTTCTGTTTTTTGGGCTAAGTTTAGTTGTTTCGTCCTTTTATAATTTACACTTTAGTATAATAACTAGCCACATTTGAGCTTAGTTAAGTTATTTCGTCCTTTTACCATTTTAA</gDNA_template>
            <first_frame> R  H  T  Q  C  I  I  T  I  V  Y  E  V  S  *  E  P  *  V  L  T  L  K  K  L  Q  I  K  L  E  H  C  L  A  I  F  I  I  K  L  S  *  R  P  F  I  H  I  Y  M  R  E  K  *  *  *  T  *  Y  L  F  P  H  K  T  I  S  Y  C  I  V  L  *  T  K  K  Y  S  M  K  F  S  T  T  K  Y  S  R  K  L  V  I  Y  K  M  Y  V  S  P  N  K  K  N  V  Q  S  I  S  Y  C  V  N  F  N  P  N  N  *  F  R  I  C  C  I  R  V  A  L  I  I  N  M  D  G  E  E  *  H  R  Y  D  *  R  I  K  N  R  T  C  Y  S  K  F  *  I  R  H  *  F  N  T  H  I  Y  I  Y  Q  E  C  S  N  K  D  K  S  Q  V  C  F  A  S  K  A  A  Y  L  N  R  K  R  L  Q  N  F  F  H  Y  *  S  L  P  K  S  N  K  I  L  W  N  S  I  L  N  K  H  S  P  S  S  K  S  Y  I  L  D  S  V  Q  G  K  T  N  G  T  I  V  K  L  Q  I  K  L  F  *  G  V  S  N  N  N  N  N  V  V  L  I  N  A  A  P  T  E  K  P  *  Q  I  *  F  L  F  F  V  Q  I  W  F  G  L  I  T  *  Y  W  I  N  D  A  K  S  L  K  I  A  C  G  F  R  S  I  G  K  G  K  P  N  K  N  N  N  L  F  I  F  F  F  A  S  L  L  *  F  F  E  I  F  F  L  I  L  V  V  S  T  D  T  D  C  L  Y  S  L  C  K  F  E  E  S  N  Y  V  M  L  R  T  *  S  S  C  *  K  S  S  L  N  A  Y  I  L  A  V  L  D  N  V  M  L  R  S  M  I  I  I  L  F  L  G  I  V  F  I  W  L  W  L  *  F  F  F  L  D  *  C  D  V  M  F  F  N  *  L  L  P  I  L  A  L  C  F  T  F  *  H  R  D  *  Y  P  R  S  S  C  F  L  N  N  *  W  V  L  I  R  C  I  C  G  G  W  M  A  C  *  G  M  L  C  V  A  H  H  F  *  *  V  *  C  T  Y  S  S  I  L  F  H  I  S  V  S  T  L  P  L  T  F  V  *  V  L  W  W  V  F  L  I  *  *  I  S  V  S  G  F  K  E  R  M  I  *  G  L  Y  D  C  N  L  N  L  V  S  Q  H  V  C  A  S  R  D  P  N  N  Y  F  K  N  N  D  P  E  Y  F  D  I  E  V  Y  I  G  N  Q  R  I  D  Q  T  D  G  N  Y  I  *  C  *  N  S  N  N  F  K  D  *  H  V  *  *  I  C  *  *  I  Y  F  L  K  N  N  Q  V  S  V  D  V  L  L  T  D  L  E  D  Y  E  D  E  V  H  V  T  N  G  A  K  S  R  K  R  R  N  L  I  I  D  D  E  E  L  S  I  Q  D  T  N  K  V  K  K  *  R  D  N  C  W  S  *  M  T  R  N  K  C  S  S  H  K  *  V  E  D  V  E  G  *  L  L  L  L  I  V  F  C  F  L  G  *  V  *  L  F  R  P  F  I  I  Y  T  L  V  *  *  L  A  T  F  E  L  S  *  V  I  S  S  F  Y  H  F   </first_frame>
            <second_frame>  D  T  H  N  A  *  *  Q  *  S  M  K  *  V  E  N  H  E  F  S  R  S  R  S  C  K  L  S  *  N  I  V  L  L  S  S  *  S  S  Y  H  N  V  H  S  Y  T  Y  I  C  A  K  N  S  D  E  P  N  I  C  S  L  I  K  P  S  L  T  V  L  Y  S  E  Q  K  S  I  L  *  N  S  V  Q  Q  S  T  L  G  N  *  *  F  T  R  C  M  *  V  L  I  K  K  M  Y  K  A  Y  H  T  V  L  T  S  I  P  T  T  D  S  E  S  A  A  Y  V  *  L  *  L  L  I  W  M  G  R  N  N  T  D  T  I  N  G  L  R  T  E  P  A  T  L  N  F  R  F  V  T  D  S  T  R  I  Y  I  Y  T  K  S  A  P  I  K  T  S  H  K  S  V  L  L  P  R  Q  L  I  *  I  E  R  D  Y  K  I  S  S  I  T  N  L  F  L  N  L  I  R  F  C  G  I  V  F  S  T  N  I  H  P  L  P  K  V  I  F  *  I  V  C  K  E  R  Q  M  G  R  L  *  N  Y  K  S  N  Y  F  E  E  Y  Q  I  I  I  I  T  L  F  *  *  M  L  H  L  L  K  S  H  N  R  F  D  F  C  F  L  F  K  F  G  L  G  *  *  H  N  T  G  S  M  T  L  K  A  *  K  *  L  V  V  F  E  V  *  V  R  A  N  Q  I  K  I  I  I  C  S  F  S  F  L  L  L  F  C  S  F  L  R  F  F  F  L  F  L  *  F  L  P  T  L  I  V  F  I  H  F  V  N  L  K  N  Q  I  M  L  C  *  E  H  D  L  H  A  K  S  L  L  *  M  P  I  S  W  R  F  W  I  M  L  C  *  D  R  *  L  *  F  F  S  L  E  L  Y  S  F  G  F  G  Y  N  S  F  S  L  I  N  V  M  S  C  S  L  T  N  C  F  L  F  *  L  S  A  L  L  S  D  I  G  I  N  I  R  E  A  H  V  F  S  T  I  D  G  Y  S  L  D  V  F  V  V  D  G  W  P  V  E  V  C  S  V  L  L  T  I  F  S  R  F  D  V  H  I  L  A  S  C  F  I  S  V  F  L  H  Y  H  L  L  L  C  E  F  S  G  G  S  S  *  F  N  R  F  Q  F  R  G  L  K  N  E  *  F  R  D  Y  M  I  V  I  L  I  *  S  L  N  M  F  A  H  R  A  I  L  T  T  I  L  K  I  M  T  L  N  T  L  T  L  R  C  I  *  G  T  N  G  L  T  K  Q  M  V  I  T  F  N  V  K  I  Q  I  I  L  R  I  N  M  F  N  K  Y  V  D  K  F  T  F  *  R  T  I  R  Y  L  L  M  C  Y  *  L  T  W  K  I  M  R  M  K  Y  M  *  L  M  V  L  R  V  E  N  E  E  T  *  S  *  M  M  R  N  *  A  F  K  T  Q  I  R  S  R  S  K  G  I  I  V  G  H  K  *  R  G  I  S  V  H  H  T  N  K  L  K  M  *  R  D  N  C  C  F  *  L  F  S  V  F  W  A  K  F  S  C  F  V  L  L  *  F  T  L  *  Y  N  N  *  P  H  L  S  L  V  K  L  F  R  P  F  T  I  L  </second_frame>
            <third_frame>   T  H  T  M  H  N  N  N  S  L  *  S  E  L  R  T  M  S  S  H  A  Q  E  A  A  N  *  V  R  T  L  S  C  Y  L  H  N  Q  V  I  I  T  S  I  H  T  H  I  Y  A  R  K  I  V  M  N  L  I  F  V  P  S  *  N  H  L  L  L  Y  C  T  L  N  K  K  V  F  Y  E  I  Q  Y  N  K  V  L  *  E  I  S  N  L  Q  D  V  C  K  S  *  *  K  K  C  T  K  H  I  I  L  C  *  L  Q  S  Q  Q  L  I  Q  N  L  L  H  T  C  S  S  D  Y  *  Y  G  W  G  G  I  T  Q  I  R  L  T  D  *  E  Q  N  L  L  L  *  I  L  D  S  S  L  I  Q  H  A  Y  I  Y  I  P  R  V  L  Q  *  R  Q  V  T  S  L  F  C  F  Q  G  S  L  F  K  S  K  E  T  T  K  F  L  P  L  L  I  S  S  *  I  *  *  D  S  V  E  *  Y  S  Q  Q  T  F  T  L  F  Q  K  L  Y  S  R  *  C  A  R  K  D  K  W  D  D  C  K  I  T  N  Q  I  I  L  R  S  I  K  *  *  *  *  R  C  S  N  K  C  C  T  Y  *  K  A  I  T  D  L  I  F  V  F  C  S  N  L  V  W  A  N  N  I  I  L  D  Q  *  R  *  K  P  K  N  S  L  W  F  S  K  Y  R  *  G  Q  T  K  *  K  *  *  F  V  H  F  L  F  C  F  S  F  V  V  F  *  D  F  F  S  Y  S  C  S  F  Y  R  H  *  L  S  L  F  T  L  *  I  *  R  I  K  L  C  Y  V  E  N  M  I  F  M  L  K  V  F  F  E  C  L  Y  P  G  G  F  G  *  C  Y  V  E  I  D  D  Y  N  S  F  P  W  N  C  I  H  L  A  L  A  I  I  L  F  P  *  L  M  *  C  H  V  L  *  L  T  A  S  Y  S  S  S  L  L  Y  F  L  T  *  G  L  I  S  E  K  L  M  F  S  Q  Q  L  M  G  T  H  *  M  Y  L  W  W  M  D  G  L  L  R  Y  A  L  C  C  S  P  F  L  V  G  L  M  Y  I  F  *  H  L  V  S  Y  Q  C  F  Y  I  T  T  Y  F  C  V  S  S  L  V  G  L  L  N  L  I  D  F  S  F  G  V  *  R  T  N  D  L  G  I  I  *  L  *  S  *  F  S  L  S  T  C  L  R  I  A  R  S  *  Q  L  F  *  K  *  *  P  *  I  L  *  H  *  G  V  Y  R  E  P  T  D  *  P  N  R  W  *  L  H  L  M  L  K  F  K  *  F  *  G  L  T  C  L  I  N  M  L  I  N  L  L  F  E  E  Q  S  G  I  C  *  C  V  I  D  *  L  G  R  L  *  G  *  S  T  C  N  *  W  C  *  E  *  K  T  K  K  P  N  H  R  *  *  G  I  K  H  S  R  H  K  *  G  Q  E  V  K  G  *  L  L  V  I  N  D  E  E  *  V  F  I  T  Q  I  S  *  R  C  R  G  I  I  V  A  S  D  C  F  L  F  F  G  L  S  L  V  V  S  S  F  Y  N  L  H  F  S  I  I  T  S  H  I  *  A  *  L  S  Y  F  V  L  L  P  F  * </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06SLm0022H01.1" strand="+"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="97005" stop="97238"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>231</number_coding_nucleotides>
                  <number_encoded_amino_acids>77</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LSALLSDIGINIREAHVFSTIDGYSLDVFVVDGWPVEVCSVLLTIFSRFDVHILASCFISVFLHYHLLLCEFSGGSS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 331 chains have been computed
$ 
$ memory statistics:
$ 414664 bytes spliced alignments in total
$ 177 spliced alignments have been stored
$ 2342 bytes was the average size of a spliced alignment
$ 21944 bytes predicted gene locations in total
$ 10 predicted gene locations have been stored
$ 2194 bytes was the average size of a predicted gene location
$ 0 megabytes was the average size of the backtrace matrix
$ 389 backtrace matrices have been allocated
$ 
$ date finished: 2009-01-16 20:55:55
-->
