<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-01-16 23:22:05"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C06SLm0067G18-NJACb/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C06SLm0067G18-NJACb/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0067G18-NJACb/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E453707" ref_strand="+" ref_description="SGN-E453707 [cSTS-20-J14]">
      <seq>ggtgggagtcgcttacgattgcctactaaatccacagggagctgtccgatcgacatttgaaaatgcgctaagtaaagtctctgatccagccgcgttcgacggcaaggactggggcgccattgatctattcaggaagtttctctatgacgatggcggcctttctcaggttccagttctgaatccttcatctattgcacggctgaaatccaatactcttgttcgatttcggggaatgatacaagatatgctgggaaatgaattatatgttggcatgtacaaggatggagaaacttggagaacgaataagtttggtgacttctttcaattccctatggctacgggatcttcacctgacatgcgagtgtgggagcggcgattactttactgtgttcctgttccagggcagaattcatggattgaatattcctctgaatccctgctcaatccaagttcaatttcctcatctccacaaagggagaaacgccatagggaggatgatacagcaatggatgacattgatatgcaagtgacaaatgaggaggttcaagcttccacctncaataaaaagatgcgtgaggatgggatcacttccaattcatccaatctaggggacactccaactgctgacattggttcagctacgagtgtgcttncatattttgacagaaattcttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0067G18-NJACb/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0067G18.1" temp_strand="-" temp_description="C06SLm0067G18.1  AC216664.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0067G18 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="4539" stop="2568"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="4239" g_stop="4076" g_length="164"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="166" r_length="166" r_score="0.890"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="4075" i_stop="3992" i_length="84">
            <donor d_prob="0.905" d_score="0.94"/>
            <acceptor a_prob="0.997" a_score="0.88"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="3991" g_stop="3878" g_length="114"/>
          <reference_exon_boundary r_type="cDNA" r_start="167" r_stop="280" r_length="114" r_score="0.921"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="3877" i_stop="3791" i_length="87">
            <donor d_prob="0.995" d_score="0.94"/>
            <acceptor a_prob="0.948" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="3790" g_stop="3677" g_length="114"/>
          <reference_exon_boundary r_type="cDNA" r_start="281" r_stop="394" r_length="114" r_score="0.939"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="3676" i_stop="3446" i_length="231">
            <donor d_prob="0.983" d_score="0.94"/>
            <acceptor a_prob="0.947" a_score="0.86"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="3445" g_stop="3314" g_length="132"/>
          <reference_exon_boundary r_type="cDNA" r_start="395" r_stop="526" r_length="132" r_score="0.902"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="3313" i_stop="3199" i_length="115">
            <donor d_prob="0.987" d_score="0.94"/>
            <acceptor a_prob="0.981" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="3198" g_stop="3154" g_length="45"/>
          <reference_exon_boundary r_type="cDNA" r_start="527" r_stop="571" r_length="45" r_score="0.956"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="3153" i_stop="2972" i_length="182">
            <donor d_prob="0.957" d_score="0.96"/>
            <acceptor a_prob="0.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="2971" g_stop="2868" g_length="104"/>
          <reference_exon_boundary r_type="cDNA" r_start="572" r_stop="675" r_length="104" r_score="0.942"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0067G18.1" gen_strand="-" ref_id="SGN-E453707" ref_strand="+">
        <total_alignment_score>0.916</total_alignment_score>
        <cumulative_length_of_scored_exons>673</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0067G18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E453707" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="4239" e_stop="4076"/>
          <exon e_start="3991" e_stop="3878"/>
          <exon e_start="3790" e_stop="3677"/>
          <exon e_start="3445" e_stop="3314"/>
          <exon e_start="3198" e_stop="3154"/>
          <exon e_start="2971" e_stop="2868"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATGGGACTCGCTTACGATTGCCTACTAAATCCACAGAGAGCTATCCGAATGACATTTCAAAATGAGAT-TCTAAAGCCTCTGATCCAGCCGCCTTCGACGGCAAGGACTGGGGCGCTATTGATCTATTCAGGAAGTTTCTCTATGACGATGGCGGCCTTTCTCA-GTTTTTTCTCTTAAAATTCCACTCAGTTCTATTATTTTATTTTTAGAAGGGTAGTTGATTAGTAGTATTATCTTGTTTTTATAGGTTCGAGTTCTGAATCCTGCATCTATAGCACGATTGAAATCCAATAATCTTGTTCGATTTCGGGGAATGATTCAAGATATGCTTGGAAATGAATTGTATGTTGGCATGTACAAGGTATAATATCATTTTTGTGCCTTCTTTCTCACTTACAGAGTACCTATGTCTTCGTTACAAAATTTTTTTTTAATGTTGTGATTCAAGGATGGAGAAACTTGGAGAACGAATAAGTTTGGTGAATTCTTTCAATTACCTATGGCTATAGGATCTTCACCTGACATGCGAGCGTGGGAGCAGCGATTACTTTACTGTATTCCTGTGAGTCTTGAAAACCTTGTTACTTTCTTGTATATCCACTAGACATACTTCCATTACTTCTTACAATTAATGATAAATTATTTTTTTTATAAAAATAGTATCTGATACTAAATTAGAGATAGTCTGCTTCTCGATTTCCTGTCTTACCTTATCAAATAAGAAACCCTATTTACTTTTGTTTTGATTCTTGAGAAACACAATTTAATAATCGATTTTCTGGTGTTGCTTTAGATTCTAAGGCAGAATTCATGGATTGAATATTCCTCTAAACCCCTACCCAATCCAAGTTCAGAATCCTCATCTCCACAAAGGGAGAAATGCCATAGGGAGGTTGATACAACAATGGATGACATTGATATGCAAGTATGTTCCATTTGTTTGTCTTGATGTACCCAAGTTAAACTTTTGCTAGTATAATCAACTAGTTGACTAATAGGCATATTCACATAAGGCGTTTTAATTATTTGTTTATTGATAGGTCACAAATGAGGAGGTTCAAGCTTCCACCTCCAATAAAAAGATGGTATATCACACTGAGTTCATCATTACTTCTCTCTTACTCTATTCAACTAGCAAGCACTATCTTTACTTGACTTGAAAATTGTGGATGTAAACTTCTGATCTTGTTGGTTGCTCTTAGTGGTTCATCGCATTGCTATCCATCAACATCTAATTAAGCTTCTTGATTTTGTGTTAATACAACAACGTGAGAATGGGATCGCTTCCAATTCATCCAATCTAGGGGACACTCCAACTGCTAACGTTGGTTCAGCTACGAGTGTGCTTCCATATTTTGACAGAACTTCTTT</genome_strand>
        <mrna_strand>GGTGGGAGTCGCTTACGATTGCCTACTAAATCCACAGGGAGCTGTCCGATCGACATTTGAAAATGCGCTAAGTAAAGTCTCTGATCCAGCCGCGTTCGACGGCAAGGACTGGGGCGCCATTGATCTATTCAGGAAGTTTCTCTATGACGATGGCGGCCTTTCTCAG....................................................................................GTTCCAGTTCTGAATCCTTCATCTATTGCACGGCTGAAATCCAATACTCTTGTTCGATTTCGGGGAATGATACAAGATATGCTGGGAAATGAATTATATGTTGGCATGTACAAG.......................................................................................GATGGAGAAACTTGGAGAACGAATAAGTTTGGTGACTTCTTTCAATTCCCTATGGCTACGGGATCTTCACCTGACATGCGAGTGTGGGAGCGGCGATTACTTTACTGTGTTCCT.......................................................................................................................................................................................................................................GTTCCAGGGCAGAATTCATGGATTGAATATTCCTCTGAATCCCTGCTCAATCCAAGTTCAATTTCCTCATCTCCACAAAGGGAGAAACGCCATAGGGAGGATGATACAGCAATGGATGACATTGATATGCAA...................................................................................................................GTGACAAATGAGGAGGTTCAAGCTTCCACCTNCAATAAAAAGATG......................................................................................................................................................................................CGTGAGGATGGGATCACTTCCAATTCATCCAATCTAGGGGACACTCCAACTGCTGACATTGGTTCAGCTACGAGTGTGCTTNCATATTTTGACAGAAATTCTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0067G18-NJACb/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E425016" ref_strand="+" ref_description="SGN-E425016 [STM-44-O2]">
      <seq>ggtgggagtcgcttacgattgcctactaaatccacagggagctgtccgatcgacatttgaaaatgcgctaagtaaagtctctgatccagccgcgttcgacggcaaggactggggcgccattgatctattcaggaagtttctctatgacgatggcggcctttctcaggttccagttctgaatccttcatctattgcacggctgaaatccaatactcttgttcgatttcggggaatgatacaagatatgctgggaaatgaattatatgttggcatgtacaaggatggagaaacttggagaacgaataagtttggtgacttctttcaattccctatggctacgggatcttcacctgacatgcgagtgtgggagcggcgattactttactgtgttcctgttccagggcagaattcatggattgaatattcctctgaatccctgctcaatccaagttcaatttcctcatctccacaaagggagaaacgccatagggaggatgatacagcaatggatgacattgatatgcaagtgacaaatgaagaggttcaagcttccacctccaataaaaagatgcgtgaggatgggatcacttccaattcatccaatctaggggacactccaactgctgacattg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0067G18-NJACb/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0067G18.1" temp_strand="-" temp_description="C06SLm0067G18.1  AC216664.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0067G18 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="4539" stop="2611"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="4239" g_stop="4076" g_length="164"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="166" r_length="166" r_score="0.890"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="4075" i_stop="3992" i_length="84">
            <donor d_prob="0.905" d_score="0.94"/>
            <acceptor a_prob="0.997" a_score="0.88"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="3991" g_stop="3878" g_length="114"/>
          <reference_exon_boundary r_type="cDNA" r_start="167" r_stop="280" r_length="114" r_score="0.921"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="3877" i_stop="3791" i_length="87">
            <donor d_prob="0.995" d_score="0.94"/>
            <acceptor a_prob="0.948" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="3790" g_stop="3677" g_length="114"/>
          <reference_exon_boundary r_type="cDNA" r_start="281" r_stop="394" r_length="114" r_score="0.939"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="3676" i_stop="3446" i_length="231">
            <donor d_prob="0.983" d_score="0.94"/>
            <acceptor a_prob="0.947" a_score="0.86"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="3445" g_stop="3314" g_length="132"/>
          <reference_exon_boundary r_type="cDNA" r_start="395" r_stop="526" r_length="132" r_score="0.902"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="3313" i_stop="3199" i_length="115">
            <donor d_prob="0.987" d_score="0.94"/>
            <acceptor a_prob="0.981" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="3198" g_stop="3154" g_length="45"/>
          <reference_exon_boundary r_type="cDNA" r_start="527" r_stop="571" r_length="45" r_score="0.956"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="3153" i_stop="2972" i_length="182">
            <donor d_prob="0.957" d_score="0.96"/>
            <acceptor a_prob="0.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="2971" g_stop="2911" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="572" r_stop="632" r_length="61" r_score="0.934"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0067G18.1" gen_strand="-" ref_id="SGN-E425016" ref_strand="+">
        <total_alignment_score>0.913</total_alignment_score>
        <cumulative_length_of_scored_exons>630</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0067G18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E425016" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="4239" e_stop="4076"/>
          <exon e_start="3991" e_stop="3878"/>
          <exon e_start="3790" e_stop="3677"/>
          <exon e_start="3445" e_stop="3314"/>
          <exon e_start="3198" e_stop="3154"/>
          <exon e_start="2971" e_stop="2911"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATGGGACTCGCTTACGATTGCCTACTAAATCCACAGAGAGCTATCCGAATGACATTTCAAAATGAGAT-TCTAAAGCCTCTGATCCAGCCGCCTTCGACGGCAAGGACTGGGGCGCTATTGATCTATTCAGGAAGTTTCTCTATGACGATGGCGGCCTTTCTCA-GTTTTTTCTCTTAAAATTCCACTCAGTTCTATTATTTTATTTTTAGAAGGGTAGTTGATTAGTAGTATTATCTTGTTTTTATAGGTTCGAGTTCTGAATCCTGCATCTATAGCACGATTGAAATCCAATAATCTTGTTCGATTTCGGGGAATGATTCAAGATATGCTTGGAAATGAATTGTATGTTGGCATGTACAAGGTATAATATCATTTTTGTGCCTTCTTTCTCACTTACAGAGTACCTATGTCTTCGTTACAAAATTTTTTTTTAATGTTGTGATTCAAGGATGGAGAAACTTGGAGAACGAATAAGTTTGGTGAATTCTTTCAATTACCTATGGCTATAGGATCTTCACCTGACATGCGAGCGTGGGAGCAGCGATTACTTTACTGTATTCCTGTGAGTCTTGAAAACCTTGTTACTTTCTTGTATATCCACTAGACATACTTCCATTACTTCTTACAATTAATGATAAATTATTTTTTTTATAAAAATAGTATCTGATACTAAATTAGAGATAGTCTGCTTCTCGATTTCCTGTCTTACCTTATCAAATAAGAAACCCTATTTACTTTTGTTTTGATTCTTGAGAAACACAATTTAATAATCGATTTTCTGGTGTTGCTTTAGATTCTAAGGCAGAATTCATGGATTGAATATTCCTCTAAACCCCTACCCAATCCAAGTTCAGAATCCTCATCTCCACAAAGGGAGAAATGCCATAGGGAGGTTGATACAACAATGGATGACATTGATATGCAAGTATGTTCCATTTGTTTGTCTTGATGTACCCAAGTTAAACTTTTGCTAGTATAATCAACTAGTTGACTAATAGGCATATTCACATAAGGCGTTTTAATTATTTGTTTATTGATAGGTCACAAATGAGGAGGTTCAAGCTTCCACCTCCAATAAAAAGATGGTATATCACACTGAGTTCATCATTACTTCTCTCTTACTCTATTCAACTAGCAAGCACTATCTTTACTTGACTTGAAAATTGTGGATGTAAACTTCTGATCTTGTTGGTTGCTCTTAGTGGTTCATCGCATTGCTATCCATCAACATCTAATTAAGCTTCTTGATTTTGTGTTAATACAACAACGTGAGAATGGGATCGCTTCCAATTCATCCAATCTAGGGGACACTCCAACTGCTAACGTTG</genome_strand>
        <mrna_strand>GGTGGGAGTCGCTTACGATTGCCTACTAAATCCACAGGGAGCTGTCCGATCGACATTTGAAAATGCGCTAAGTAAAGTCTCTGATCCAGCCGCGTTCGACGGCAAGGACTGGGGCGCCATTGATCTATTCAGGAAGTTTCTCTATGACGATGGCGGCCTTTCTCAG....................................................................................GTTCCAGTTCTGAATCCTTCATCTATTGCACGGCTGAAATCCAATACTCTTGTTCGATTTCGGGGAATGATACAAGATATGCTGGGAAATGAATTATATGTTGGCATGTACAAG.......................................................................................GATGGAGAAACTTGGAGAACGAATAAGTTTGGTGACTTCTTTCAATTCCCTATGGCTACGGGATCTTCACCTGACATGCGAGTGTGGGAGCGGCGATTACTTTACTGTGTTCCT.......................................................................................................................................................................................................................................GTTCCAGGGCAGAATTCATGGATTGAATATTCCTCTGAATCCCTGCTCAATCCAAGTTCAATTTCCTCATCTCCACAAAGGGAGAAACGCCATAGGGAGGATGATACAGCAATGGATGACATTGATATGCAA...................................................................................................................GTGACAAATGAAGAGGTTCAAGCTTCCACCTCCAATAAAAAGATG......................................................................................................................................................................................CGTGAGGATGGGATCACTTCCAATTCATCCAATCTAGGGGACACTCCAACTGCTGACATTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0067G18-NJACb/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E687618" ref_strand="+" ref_description="SGN-E687618 [T3_tus_79_B19]">
      <seq>cgatataatggggcttagggctattcccttttcaccttctcaaaattattatttgagtggttcagaatatttgcccaaatgcagtgttcttggtagcagcagaactggctcatcaaaactagtactaacaatttcagcaaaggctaaaaaagatgacgcacaagaagaagaagaagaaccaaaaaacaagaggaaacaatcgttgttttcaagtgtaactgaagctcttgatttttctcaagttagatctgcaaaggatgctgagcttcttgatgaagcaagagaaaaaactcaatctggagagagaatgtctaaagaacagtatggagctcttagaaggaagattggtggaacatacaaagatttcttcaagtcctatgttgaagtggatggacaatatgtggaggagggatgggtagacaaaacatgcaaggtttgcaagaaagatacaagtggagaagcaagacaagttgacaaaatgggacgatatgcgcacgtagcttgtctacaaaaatccaaccctggaaatttcttcaccaagctcttctcaagatgaattttatagtatatatcctcctcatatatatgaatgaactccacagaatataatagccttggccattttgtgtttttctttttttcttgactcaatcatgaatgtcatcaattggtgttagcttcttgaacagagttattcaactatattgtgtattcagaggcgaatagagctatgattttttgaactttatgaattctcaatttagaatcnnaaaaaaaaaaaaaaaaaaaaaaaaaaaagaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0067G18-NJACb/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0067G18.1" temp_strand="-" temp_description="C06SLm0067G18.1  AC216664.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0067G18 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="8263" stop="6182"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="7963" g_stop="7642" g_length="322"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="322" r_length="322" r_score="0.997"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="7641" i_stop="7036" i_length="606">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.941" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="7035" g_stop="6972" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="323" r_stop="386" r_length="64" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="6971" i_stop="6864" i_length="108">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.960" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="6863" g_stop="6482" g_length="382"/>
          <reference_exon_boundary r_type="cDNA" r_start="387" r_stop="768" r_length="382" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="771" polyA_stop="806"/>
      <MATCH_line gen_id="C06SLm0067G18.1" gen_strand="-" ref_id="SGN-E687618" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>768</cumulative_length_of_scored_exons>
        <coverage percentage="0.953" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0067G18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E687618" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="7963" e_stop="7642"/>
          <exon e_start="7035" e_stop="6972"/>
          <exon e_start="6863" e_stop="6482"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAATATAATGGGGCTTAGGGCTATTCCCTTTTCACCTTCTCAAAATTATTATTTGAGTGGTTCAGAATATTTGCCCAAATGCAGTGTTCTTGGTAGCAGCAGAACTGGCTCATCAAAACTAGTACTAACAATTTCAGCAAAGGCTAAAAAAGATGACGCACAAGAAGAAGAAGAAGAACCAAAAAACAAGAGGAAACAATCGTTGTTTTCAAGTGTAACTGAAGCTCTTGATTTTTCTCAAGTTAGATCTGCAAAGGATGCTGAGCTTCTTGATGAAGCAAGAGAAAAAACTCAATCTGGAGAGAGAATGTCTAAAGAACAGGTTAATTCTTATTTCTATAACGCATTATACAGTTATTAAAGCATGTATTAATAATACTCTTTCGTCTTCTGGTAGTTAATTTAGAAAGTAAATTATTCAGATACAAAATAAATAGTGTAATTGGTGAAGCTCACATAACTAACTAATATATGACTACCTACATAAAAAAAATATATATATATATATATAAATTTCCTCGTACATAACTAAGTTACTAATATTTGCATAATTTTTATCAGCTACCAAACGACATTATGGTCACCCTTATGTCAGGTTGTTCAATTGGACACCCTTCGTCATATGAGTAAAATAATAATAAAGTGATTAAATACCATATTTTGAACACCATTGACATAACAATATGATGTATTCTAATGGTTTTAAGTGTCTTGAAAGAGTAAAGACACACAAAATTAATGTGTTTGTATGTTCAAATCTCATTACTAGCCAAAAAAATTCCACTTTTTAAGAAGAGCATGTTCACTTGAACACTTTTGGACACTCTTAATGAAATTTCTGGCTCTGCCAATGAACAACGCTAACAGTATATGTTAATGAAGTTGTGTATTAGTACTTGTTTACTTATGAAGACGACTCTTTTTGTAGTATGGAGCTCTTAGAAGGAAGATTGGTGGAACATACAAAGATTTCTTCAAGTCCTATGTTGAAGGTAATTATATAATAAACTCCTAATTAATTATATTATGTAATGATCTATCTATGGCTTTAATTAATTAACTACTCTTTTTGTTTTTTTGGGAACAAATTAAATTAATAGTGGATGGACAATATGTGGAGGAGGGATGGGTAGACAAAACATGCAAGGTTTGCAAGAAAGATACAAGTGGAGAAGCAAGACAAGTTGACAAAATGGGACGATATGCGCACGTAGCTTGTCTACAAAAATCCAACCCTGGAAATTTCTTCACCAAGCTCTTCTCAAGATGAATTTTATAGTATATATCCTCCTCATATATATGAATGAACTCCACAGAATATAATAGCCTTGGCCATTTTGTGTTTTTCTTTTTTTCTTGACTCAATCATGAATGTCATCAATTGGTGTTAGCTTCTTGAACAGAGTTATTCAACTATATTGTGTATTCAGAGGCGAATAGAGCTATGATTTTTTGAACTTTATGAATTCTCAATTTAGAATC</genome_strand>
        <mrna_strand>CGATATAATGGGGCTTAGGGCTATTCCCTTTTCACCTTCTCAAAATTATTATTTGAGTGGTTCAGAATATTTGCCCAAATGCAGTGTTCTTGGTAGCAGCAGAACTGGCTCATCAAAACTAGTACTAACAATTTCAGCAAAGGCTAAAAAAGATGACGCACAAGAAGAAGAAGAAGAACCAAAAAACAAGAGGAAACAATCGTTGTTTTCAAGTGTAACTGAAGCTCTTGATTTTTCTCAAGTTAGATCTGCAAAGGATGCTGAGCTTCTTGATGAAGCAAGAGAAAAAACTCAATCTGGAGAGAGAATGTCTAAAGAACAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGGAGCTCTTAGAAGGAAGATTGGTGGAACATACAAAGATTTCTTCAAGTCCTATGTTGAAG............................................................................................................TGGATGGACAATATGTGGAGGAGGGATGGGTAGACAAAACATGCAAGGTTTGCAAGAAAGATACAAGTGGAGAAGCAAGACAAGTTGACAAAATGGGACGATATGCGCACGTAGCTTGTCTACAAAAATCCAACCCTGGAAATTTCTTCACCAAGCTCTTCTCAAGATGAATTTTATAGTATATATCCTCCTCATATATATGAATGAACTCCACAGAATATAATAGCCTTGGCCATTTTGTGTTTTTCTTTTTTTCTTGACTCAATCATGAATGTCATCAATTGGTGTTAGCTTCTTGAACAGAGTTATTCAACTATATTGTGTATTCAGAGGCGAATAGAGCTATGATTTTTTGAACTTTATGAATTCTCAATTTAGAATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0067G18-NJACb/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E700479" ref_strand="+" ref_description="SGN-E700479 [FA13BA05]">
      <seq>attcatacaatataatggggcttagggctattcccttttcaccttctcaaaattattatttgagtggttcagaatatttgcccaaatgcagtgttcttcttagcagcagaactggctcatcaaaactagtactaacaatttcagcaaaggctaaaaaagatgacgcacaagaagaagaagaagaaccaaaaaacaagaggaaacaatcgttgttttcaagtgtaactgaagctcttgatttttctcaagttagatctgcaaaggatgctgagcttcttgatgaagcaagagaaaaaactcaatctggagagagaatgtctaaagaacagtatggagctcttagaaggaagattggtggaacatacaaagatttcttcaagtcctatgttgaagtggatggacaatatgtggaggagggatgggtagacaaaacatgcaaggtttgcaagaaagatacaagtggagaagcaagacaagttgacaaaatgggacgatatgcgcacgtagcttgtctacaaaaatccaaccctggaaatttcttcaccaagctcttctcaagatgaattttatagtatatatcctcctcatatatatgaatgaactccacagaatataatagccttggccattttgtgtttttctttttttcttgactcaatcatgaatgtcatcaattggtgttagcttcttgaacagagttattcaactatattgtgtattcagaggcgaataat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0067G18-NJACb/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0067G18.1" temp_strand="-" temp_description="C06SLm0067G18.1  AC216664.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0067G18 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="8270" stop="6225"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="7970" g_stop="7642" g_length="329"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="329" r_length="329" r_score="0.994"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="7641" i_stop="7036" i_length="606">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.941" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="7035" g_stop="6972" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="330" r_stop="393" r_length="64" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="6971" i_stop="6864" i_length="108">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.960" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="6863" g_stop="6523" g_length="341"/>
          <reference_exon_boundary r_type="cDNA" r_start="394" r_stop="734" r_length="341" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0067G18.1" gen_strand="-" ref_id="SGN-E700479" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>734</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0067G18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E700479" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="7970" e_stop="7642"/>
          <exon e_start="7035" e_stop="6972"/>
          <exon e_start="6863" e_stop="6523"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTCATACAATATAATGGGGCTTAGGGCTATTCCCTTTTCACCTTCTCAAAATTATTATTTGAGTGGTTCAGAATATTTGCCCAAATGCAGTGTTCTTGGTAGCAGCAGAACTGGCTCATCAAAACTAGTACTAACAATTTCAGCAAAGGCTAAAAAAGATGACGCACAAGAAGAAGAAGAAGAACCAAAAAACAAGAGGAAACAATCGTTGTTTTCAAGTGTAACTGAAGCTCTTGATTTTTCTCAAGTTAGATCTGCAAAGGATGCTGAGCTTCTTGATGAAGCAAGAGAAAAAACTCAATCTGGAGAGAGAATGTCTAAAGAACAGGTTAATTCTTATTTCTATAACGCATTATACAGTTATTAAAGCATGTATTAATAATACTCTTTCGTCTTCTGGTAGTTAATTTAGAAAGTAAATTATTCAGATACAAAATAAATAGTGTAATTGGTGAAGCTCACATAACTAACTAATATATGACTACCTACATAAAAAAAATATATATATATATATATAAATTTCCTCGTACATAACTAAGTTACTAATATTTGCATAATTTTTATCAGCTACCAAACGACATTATGGTCACCCTTATGTCAGGTTGTTCAATTGGACACCCTTCGTCATATGAGTAAAATAATAATAAAGTGATTAAATACCATATTTTGAACACCATTGACATAACAATATGATGTATTCTAATGGTTTTAAGTGTCTTGAAAGAGTAAAGACACACAAAATTAATGTGTTTGTATGTTCAAATCTCATTACTAGCCAAAAAAATTCCACTTTTTAAGAAGAGCATGTTCACTTGAACACTTTTGGACACTCTTAATGAAATTTCTGGCTCTGCCAATGAACAACGCTAACAGTATATGTTAATGAAGTTGTGTATTAGTACTTGTTTACTTATGAAGACGACTCTTTTTGTAGTATGGAGCTCTTAGAAGGAAGATTGGTGGAACATACAAAGATTTCTTCAAGTCCTATGTTGAAGGTAATTATATAATAAACTCCTAATTAATTATATTATGTAATGATCTATCTATGGCTTTAATTAATTAACTACTCTTTTTGTTTTTTTGGGAACAAATTAAATTAATAGTGGATGGACAATATGTGGAGGAGGGATGGGTAGACAAAACATGCAAGGTTTGCAAGAAAGATACAAGTGGAGAAGCAAGACAAGTTGACAAAATGGGACGATATGCGCACGTAGCTTGTCTACAAAAATCCAACCCTGGAAATTTCTTCACCAAGCTCTTCTCAAGATGAATTTTATAGTATATATCCTCCTCATATATATGAATGAACTCCACAGAATATAATAGCCTTGGCCATTTTGTGTTTTTCTTTTTTTCTTGACTCAATCATGAATGTCATCAATTGGTGTTAGCTTCTTGAACAGAGTTATTCAACTATATTGTGTATTCAGAGGCGAATAGA</genome_strand>
        <mrna_strand>ATTCATACAATATAATGGGGCTTAGGGCTATTCCCTTTTCACCTTCTCAAAATTATTATTTGAGTGGTTCAGAATATTTGCCCAAATGCAGTGTTCTTCTTAGCAGCAGAACTGGCTCATCAAAACTAGTACTAACAATTTCAGCAAAGGCTAAAAAAGATGACGCACAAGAAGAAGAAGAAGAACCAAAAAACAAGAGGAAACAATCGTTGTTTTCAAGTGTAACTGAAGCTCTTGATTTTTCTCAAGTTAGATCTGCAAAGGATGCTGAGCTTCTTGATGAAGCAAGAGAAAAAACTCAATCTGGAGAGAGAATGTCTAAAGAACAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGGAGCTCTTAGAAGGAAGATTGGTGGAACATACAAAGATTTCTTCAAGTCCTATGTTGAAG............................................................................................................TGGATGGACAATATGTGGAGGAGGGATGGGTAGACAAAACATGCAAGGTTTGCAAGAAAGATACAAGTGGAGAAGCAAGACAAGTTGACAAAATGGGACGATATGCGCACGTAGCTTGTCTACAAAAATCCAACCCTGGAAATTTCTTCACCAAGCTCTTCTCAAGATGAATTTTATAGTATATATCCTCCTCATATATATGAATGAACTCCACAGAATATAATAGCCTTGGCCATTTTGTGTTTTTCTTTTTTTCTTGACTCAATCATGAATGTCATCAATTGGTGTTAGCTTCTTGAACAGAGTTATTCAACTATATTGTGTATTCAGAGGCGAATAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0067G18-NJACb/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E322492" ref_strand="+" ref_description="SGN-E322492 [cTOB-26-K4]">
      <seq>tataatggggcttagggctattcccttttcaccttctcaaaattattatttgagtggttcagaatatttgcccaaatgcagtgttcttggtagcagcagaactggctcatcaaaactagtactaacaatttcagcaaaggctaaaaaagatgacgcacaagaagaagaagaagaaccaaaaaacaagaggaaacaatcgttgttttcaagtgtaactgaagctcttgatttttctcaagttagatctgcaaaggatgctgagcttcttgatgaagcaagagaaaaaactcaatctggagagagaatgtctaaagaacagtatggagctcttagaaggaagattggtggaacatacaaagatttcttcaagtcctatgttgaagtggatggacaatatgtggaggagggatgggtagacaaaacatgcaaggtttgcaagaaagatacaagtggagaagcaagacaagttgacaaaatgggacgatatgcgcacgtagcttgtctacaaaatcccaaccctggaatttctttcaccagctctttctcagatgaattttatagtatatatcctcctcatatatatgaatgaactc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0067G18-NJACb/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0067G18.1" temp_strand="-" temp_description="C06SLm0067G18.1  AC216664.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0067G18 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="8260" stop="6353"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="7960" g_stop="7642" g_length="319"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="319" r_length="319" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="7641" i_stop="7036" i_length="606">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.941" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="7035" g_stop="6972" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="320" r_stop="383" r_length="64" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="6971" i_stop="6864" i_length="108">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.960" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="6863" g_stop="6653" g_length="211"/>
          <reference_exon_boundary r_type="cDNA" r_start="384" r_stop="593" r_length="210" r_score="0.953"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0067G18.1" gen_strand="-" ref_id="SGN-E322492" ref_strand="+">
        <total_alignment_score>0.983</total_alignment_score>
        <cumulative_length_of_scored_exons>594</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0067G18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E322492" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="7960" e_stop="7642"/>
          <exon e_start="7035" e_stop="6972"/>
          <exon e_start="6863" e_stop="6653"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATAATGGGGCTTAGGGCTATTCCCTTTTCACCTTCTCAAAATTATTATTTGAGTGGTTCAGAATATTTGCCCAAATGCAGTGTTCTTGGTAGCAGCAGAACTGGCTCATCAAAACTAGTACTAACAATTTCAGCAAAGGCTAAAAAAGATGACGCACAAGAAGAAGAAGAAGAACCAAAAAACAAGAGGAAACAATCGTTGTTTTCAAGTGTAACTGAAGCTCTTGATTTTTCTCAAGTTAGATCTGCAAAGGATGCTGAGCTTCTTGATGAAGCAAGAGAAAAAACTCAATCTGGAGAGAGAATGTCTAAAGAACAGGTTAATTCTTATTTCTATAACGCATTATACAGTTATTAAAGCATGTATTAATAATACTCTTTCGTCTTCTGGTAGTTAATTTAGAAAGTAAATTATTCAGATACAAAATAAATAGTGTAATTGGTGAAGCTCACATAACTAACTAATATATGACTACCTACATAAAAAAAATATATATATATATATATAAATTTCCTCGTACATAACTAAGTTACTAATATTTGCATAATTTTTATCAGCTACCAAACGACATTATGGTCACCCTTATGTCAGGTTGTTCAATTGGACACCCTTCGTCATATGAGTAAAATAATAATAAAGTGATTAAATACCATATTTTGAACACCATTGACATAACAATATGATGTATTCTAATGGTTTTAAGTGTCTTGAAAGAGTAAAGACACACAAAATTAATGTGTTTGTATGTTCAAATCTCATTACTAGCCAAAAAAATTCCACTTTTTAAGAAGAGCATGTTCACTTGAACACTTTTGGACACTCTTAATGAAATTTCTGGCTCTGCCAATGAACAACGCTAACAGTATATGTTAATGAAGTTGTGTATTAGTACTTGTTTACTTATGAAGACGACTCTTTTTGTAGTATGGAGCTCTTAGAAGGAAGATTGGTGGAACATACAAAGATTTCTTCAAGTCCTATGTTGAAGGTAATTATATAATAAACTCCTAATTAATTATATTATGTAATGATCTATCTATGGCTTTAATTAATTAACTACTCTTTTTGTTTTTTTGGGAACAAATTAAATTAATAGTGGATGGACAATATGTGGAGGAGGGATGGGTAGACAAAACATGCAAGGTTTGCAAGAAAGATACAAGTGGAGAAGCAAGACAAGTTGACAAAATGGGACGATATGCGCACGTAGCTTGTCTACAAAAATCCAACCCTGGAAATTTCTTCACCAAGCTCTTCTCAAGATGAATTTTATAGTATATATCCTCCTCATATATATGAATGAACTC</genome_strand>
        <mrna_strand>TATAATGGGGCTTAGGGCTATTCCCTTTTCACCTTCTCAAAATTATTATTTGAGTGGTTCAGAATATTTGCCCAAATGCAGTGTTCTTGGTAGCAGCAGAACTGGCTCATCAAAACTAGTACTAACAATTTCAGCAAAGGCTAAAAAAGATGACGCACAAGAAGAAGAAGAAGAACCAAAAAACAAGAGGAAACAATCGTTGTTTTCAAGTGTAACTGAAGCTCTTGATTTTTCTCAAGTTAGATCTGCAAAGGATGCTGAGCTTCTTGATGAAGCAAGAGAAAAAACTCAATCTGGAGAGAGAATGTCTAAAGAACAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGGAGCTCTTAGAAGGAAGATTGGTGGAACATACAAAGATTTCTTCAAGTCCTATGTTGAAG............................................................................................................TGGATGGACAATATGTGGAGGAGGGATGGGTAGACAAAACATGCAAGGTTTGCAAGAAAGATACAAGTGGAGAAGCAAGACAAGTTGACAAAATGGGACGATATGCGCACGTAGCTTGTCTACAAAATCCCAACCCTGGAATTTCTTTCACC-AGCTCTTTCTCAGATGAATTTTATAGTATATATCCTCCTCATATATATGAATGAACTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0067G18-NJACb/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E468288" ref_strand="+" ref_description="SGN-E468288 [cSTB-3-O3]">
      <seq>attaagtctcaaattcataccaatataatggggctgagggctattcccttttcaccttctcaaaattactatttgagtggttcagaatatttccccaaatgcagtattcttcgtagcagcagaatttgctcatcaaaactagtagcaatttcagcaaaggctaaaaaagaggatacacaagaagaagaaccaaaaaataagaggaaacaatctttgttttcaagtgtaactgaagctcttgatttttcccaagttagatcttcaaaggacgctgagcttcttgatgaagcaagagaaaaaacacaatccggagagagaatgtctagagaacagtatggagctctgagaaggaagattggtgggacatacaaagatttcttcaagtcctacgttgaggtggatggacaatatgtggaggagggatgggtagacaaaacgtgcaaggtttgcaagaaagatacgagtggagaagcaaggcaagttgacaaattgggaagatatgcgcacgtagcttgcctagaaaaatcccactctggaaatttcttcaccaagctcttctcaagatgaattttgtagtatatatcttaagggctaattagtagtacgtactatttcct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0067G18-NJACb/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0067G18.1" temp_strand="-" temp_description="C06SLm0067G18.1  AC216664.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0067G18 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="8282" stop="6375"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="7982" g_stop="7642" g_length="341"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="333" r_length="333" r_score="0.906"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="7641" i_stop="7036" i_length="606">
            <donor d_prob="0.998" d_score="0.94"/>
            <acceptor a_prob="0.941" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="7035" g_stop="6972" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="334" r_stop="397" r_length="64" r_score="0.938"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="6971" i_stop="6864" i_length="108">
            <donor d_prob="1.000" d_score="0.94"/>
            <acceptor a_prob="0.960" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="6863" g_stop="6682" g_length="182"/>
          <reference_exon_boundary r_type="cDNA" r_start="398" r_stop="579" r_length="182" r_score="0.945"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0067G18.1" gen_strand="-" ref_id="SGN-E468288" ref_strand="+">
        <total_alignment_score>0.922</total_alignment_score>
        <cumulative_length_of_scored_exons>587</cumulative_length_of_scored_exons>
        <coverage percentage="0.951" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0067G18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E468288" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="7982" e_stop="7642"/>
          <exon e_start="7035" e_stop="6972"/>
          <exon e_start="6863" e_stop="6682"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTACGCCTCAAATTCATA-CAATATAATGGGGCTTAGGGCTATTCCCTTTTCACCTTCTCAAAATTATTATTTGAGTGGTTCAGAATATTTGCCCAAATGCAGTGTTCTTGGTAGCAGCAGAACTGGCTCATCAAAACTAGTACTAACAATTTCAGCAAAGGCTAAAAAAGATGACGCACAAGAAGAAGAAGAAGAACCAAAAAACAAGAGGAAACAATCGTTGTTTTCAAGTGTAACTGAAGCTCTTGATTTTTCTCAAGTTAGATCTGCAAAGGATGCTGAGCTTCTTGATGAAGCAAGAGAAAAAACTCAATCTGGAGAGAGAATGTCTAAAGAACAGGTTAATTCTTATTTCTATAACGCATTATACAGTTATTAAAGCATGTATTAATAATACTCTTTCGTCTTCTGGTAGTTAATTTAGAAAGTAAATTATTCAGATACAAAATAAATAGTGTAATTGGTGAAGCTCACATAACTAACTAATATATGACTACCTACATAAAAAAAATATATATATATATATATAAATTTCCTCGTACATAACTAAGTTACTAATATTTGCATAATTTTTATCAGCTACCAAACGACATTATGGTCACCCTTATGTCAGGTTGTTCAATTGGACACCCTTCGTCATATGAGTAAAATAATAATAAAGTGATTAAATACCATATTTTGAACACCATTGACATAACAATATGATGTATTCTAATGGTTTTAAGTGTCTTGAAAGAGTAAAGACACACAAAATTAATGTGTTTGTATGTTCAAATCTCATTACTAGCCAAAAAAATTCCACTTTTTAAGAAGAGCATGTTCACTTGAACACTTTTGGACACTCTTAATGAAATTTCTGGCTCTGCCAATGAACAACGCTAACAGTATATGTTAATGAAGTTGTGTATTAGTACTTGTTTACTTATGAAGACGACTCTTTTTGTAGTATGGAGCTCTTAGAAGGAAGATTGGTGGAACATACAAAGATTTCTTCAAGTCCTATGTTGAAGGTAATTATATAATAAACTCCTAATTAATTATATTATGTAATGATCTATCTATGGCTTTAATTAATTAACTACTCTTTTTGTTTTTTTGGGAACAAATTAAATTAATAGTGGATGGACAATATGTGGAGGAGGGATGGGTAGACAAAACATGCAAGGTTTGCAAGAAAGATACAAGTGGAGAAGCAAGACAAGTTGACAAAATGGGACGATATGCGCACGTAGCTTGTCTACAAAAATCCAACCCTGGAAATTTCTTCACCAAGCTCTTCTCAAGATGAATTTTATAGTAT</genome_strand>
        <mrna_strand>ATTAAGTCTCAAATTCATACCAATATAATGGGGCTGAGGGCTATTCCCTTTTCACCTTCTCAAAATTACTATTTGAGTGGTTCAGAATATTTCCCCAAATGCAGTATTCTTCGTAGCAGCAGAATTTGCTCATCAAAACTAG---TAGCAATTTCAGCAAAGGCTAAAAAAGA-G--G-A-TA-CACAAGAAGAAGAACCAAAAAATAAGAGGAAACAATCTTTGTTTTCAAGTGTAACTGAAGCTCTTGATTTTTCCCAAGTTAGATCTTCAAAGGACGCTGAGCTTCTTGATGAAGCAAGAGAAAAAACACAATCCGGAGAGAGAATGTCTAGAGAACAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGGAGCTCTGAGAAGGAAGATTGGTGGGACATACAAAGATTTCTTCAAGTCCTACGTTGAGG............................................................................................................TGGATGGACAATATGTGGAGGAGGGATGGGTAGACAAAACGTGCAAGGTTTGCAAGAAAGATACGAGTGGAGAAGCAAGGCAAGTTGACAAATTGGGAAGATATGCGCACGTAGCTTGCCTAGAAAAATCCCACTCTGGAAATTTCTTCACCAAGCTCTTCTCAAGATGAATTTTGTAGTAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0067G18-NJACb/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E474129" ref_strand="+" ref_description="SGN-E474129 [cSTB-34-F10]">
      <seq>acaacttcaaggtaagaattaattaagcctcaaattcatacaatataatggggctgagggctattcccttttcaccttctcaaaattactatttgagtggttcagaatatttccccaaatgcagtattcttcgtagcagcagaatttgctcatcaaaactagtagcaatttcagcaaaggctaaaaaagaggatacacaagaagaagaaccaaaaaataagaggaaacaatctttgttttcaagtgtaactgaagctcttgatttttcccaagttagatcttcaaaggacgctgagcttcttgatgaagcaagggaaaaaacacaatccggagagagaatgtctagagaacagtatggagctcttagaaggaagattggtgggacatacaaagatttcttcaagtcctacgttgaggtggatggacaatatgtggaggagggatgggtagacaaaacgtgcaaggtttgcaagaaagatacgagtggagaaacaaggcaagttgacaaattgggaagatatgcgcacgtagcttgcctag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0067G18-NJACb/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0067G18.1" temp_strand="-" temp_description="C06SLm0067G18.1  AC216664.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0067G18 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="8291" stop="6442"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="7988" g_stop="7642" g_length="347"/>
          <reference_exon_boundary r_type="cDNA" r_start="16" r_stop="353" r_length="338" r_score="0.911"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="7641" i_stop="7036" i_length="606">
            <donor d_prob="0.998" d_score="0.92"/>
            <acceptor a_prob="0.941" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="7035" g_stop="6972" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="354" r_stop="417" r_length="64" r_score="0.953"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="6971" i_stop="6864" i_length="108">
            <donor d_prob="1.000" d_score="0.94"/>
            <acceptor a_prob="0.960" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="6863" g_stop="6741" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="418" r_stop="540" r_length="123" r_score="0.935"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0067G18.1" gen_strand="-" ref_id="SGN-E474129" ref_strand="+">
        <total_alignment_score>0.921</total_alignment_score>
        <cumulative_length_of_scored_exons>534</cumulative_length_of_scored_exons>
        <coverage percentage="0.989" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0067G18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E474129" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="7988" e_stop="7642"/>
          <exon e_start="7035" e_stop="6972"/>
          <exon e_start="6863" e_stop="6741"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAATTAATTACGCCTCAAATTCATACAATATAATGGGGCTTAGGGCTATTCCCTTTTCACCTTCTCAAAATTATTATTTGAGTGGTTCAGAATATTTGCCCAAATGCAGTGTTCTTGGTAGCAGCAGAACTGGCTCATCAAAACTAGTACTAACAATTTCAGCAAAGGCTAAAAAAGATGACGCACAAGAAGAAGAAGAAGAACCAAAAAACAAGAGGAAACAATCGTTGTTTTCAAGTGTAACTGAAGCTCTTGATTTTTCTCAAGTTAGATCTGCAAAGGATGCTGAGCTTCTTGATGAAGCAAGAGAAAAAACTCAATCTGGAGAGAGAATGTCTAAAGAACAGGTTAATTCTTATTTCTATAACGCATTATACAGTTATTAAAGCATGTATTAATAATACTCTTTCGTCTTCTGGTAGTTAATTTAGAAAGTAAATTATTCAGATACAAAATAAATAGTGTAATTGGTGAAGCTCACATAACTAACTAATATATGACTACCTACATAAAAAAAATATATATATATATATATAAATTTCCTCGTACATAACTAAGTTACTAATATTTGCATAATTTTTATCAGCTACCAAACGACATTATGGTCACCCTTATGTCAGGTTGTTCAATTGGACACCCTTCGTCATATGAGTAAAATAATAATAAAGTGATTAAATACCATATTTTGAACACCATTGACATAACAATATGATGTATTCTAATGGTTTTAAGTGTCTTGAAAGAGTAAAGACACACAAAATTAATGTGTTTGTATGTTCAAATCTCATTACTAGCCAAAAAAATTCCACTTTTTAAGAAGAGCATGTTCACTTGAACACTTTTGGACACTCTTAATGAAATTTCTGGCTCTGCCAATGAACAACGCTAACAGTATATGTTAATGAAGTTGTGTATTAGTACTTGTTTACTTATGAAGACGACTCTTTTTGTAGTATGGAGCTCTTAGAAGGAAGATTGGTGGAACATACAAAGATTTCTTCAAGTCCTATGTTGAAGGTAATTATATAATAAACTCCTAATTAATTATATTATGTAATGATCTATCTATGGCTTTAATTAATTAACTACTCTTTTTGTTTTTTTGGGAACAAATTAAATTAATAGTGGATGGACAATATGTGGAGGAGGGATGGGTAGACAAAACATGCAAGGTTTGCAAGAAAGATACAAGTGGAGAAGCAAGACAAGTTGACAAAATGGGACGATATGCGCACGTAGCTTGTCTAC</genome_strand>
        <mrna_strand>GAATTAATTAAGCCTCAAATTCATACAATATAATGGGGCTGAGGGCTATTCCCTTTTCACCTTCTCAAAATTACTATTTGAGTGGTTCAGAATATTTCCCCAAATGCAGTATTCTTCGTAGCAGCAGAATTTGCTCATCAAAACTAG---TAGCAATTTCAGCAAAGGCTAAAAAAGA-G--G-A-TA-CACAAGAAGAAGAACCAAAAAATAAGAGGAAACAATCTTTGTTTTCAAGTGTAACTGAAGCTCTTGATTTTTCCCAAGTTAGATCTTCAAAGGACGCTGAGCTTCTTGATGAAGCAAGGGAAAAAACACAATCCGGAGAGAGAATGTCTAGAGAACAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGGAGCTCTTAGAAGGAAGATTGGTGGGACATACAAAGATTTCTTCAAGTCCTACGTTGAGG............................................................................................................TGGATGGACAATATGTGGAGGAGGGATGGGTAGACAAAACGTGCAAGGTTTGCAAGAAAGATACGAGTGGAGAAACAAGGCAAGTTGACAAATTGGGAAGATATGCGCACGTAGCTTGCCTAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0067G18-NJACb/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E295622" ref_strand="+" ref_description="SGN-E295622 [cLET-25-I21]">
      <seq>gttcatacaatataatggggcttagggctattcccttttcaccttctcaaaattattatttgagtggttcagaatatttgcccaaatgcagtgttcttggtagcagcagaactggctcatcaaaactagtactaacaatttcagcaaaggctaaaaaagatgacgcacaagaagaagaagaagaaccaaaaaacaagaggaaacaatcgttgttttcaagtgtaactgaagctcttgatttttctcaagttagatctgcaaaggatgctgagcttcttgatgaagcaagagaaaaaactcaatctggagagagaatgtctaaagaacagtatggagctcttagaaggaagattggtggaacatacaaagatttcttcaagtcctatgttgaagtggatggacaatatgtggaggagggatgggtagacaaaacatgcaaggtttgcaagaaagatacaagtggagaagcaagacaagttgacaaaatgggacga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0067G18-NJACb/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0067G18.1" temp_strand="-" temp_description="C06SLm0067G18.1  AC216664.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0067G18 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="8269" stop="6463"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="7970" g_stop="7642" g_length="329"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="329" r_length="329" r_score="0.997"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="7641" i_stop="7036" i_length="606">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.941" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="7035" g_stop="6972" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="330" r_stop="393" r_length="64" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="6971" i_stop="6864" i_length="108">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.960" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="6863" g_stop="6763" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="394" r_stop="494" r_length="101" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0067G18.1" gen_strand="-" ref_id="SGN-E295622" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>494</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0067G18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E295622" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="7970" e_stop="7642"/>
          <exon e_start="7035" e_stop="6972"/>
          <exon e_start="6863" e_stop="6763"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTCATACAATATAATGGGGCTTAGGGCTATTCCCTTTTCACCTTCTCAAAATTATTATTTGAGTGGTTCAGAATATTTGCCCAAATGCAGTGTTCTTGGTAGCAGCAGAACTGGCTCATCAAAACTAGTACTAACAATTTCAGCAAAGGCTAAAAAAGATGACGCACAAGAAGAAGAAGAAGAACCAAAAAACAAGAGGAAACAATCGTTGTTTTCAAGTGTAACTGAAGCTCTTGATTTTTCTCAAGTTAGATCTGCAAAGGATGCTGAGCTTCTTGATGAAGCAAGAGAAAAAACTCAATCTGGAGAGAGAATGTCTAAAGAACAGGTTAATTCTTATTTCTATAACGCATTATACAGTTATTAAAGCATGTATTAATAATACTCTTTCGTCTTCTGGTAGTTAATTTAGAAAGTAAATTATTCAGATACAAAATAAATAGTGTAATTGGTGAAGCTCACATAACTAACTAATATATGACTACCTACATAAAAAAAATATATATATATATATATAAATTTCCTCGTACATAACTAAGTTACTAATATTTGCATAATTTTTATCAGCTACCAAACGACATTATGGTCACCCTTATGTCAGGTTGTTCAATTGGACACCCTTCGTCATATGAGTAAAATAATAATAAAGTGATTAAATACCATATTTTGAACACCATTGACATAACAATATGATGTATTCTAATGGTTTTAAGTGTCTTGAAAGAGTAAAGACACACAAAATTAATGTGTTTGTATGTTCAAATCTCATTACTAGCCAAAAAAATTCCACTTTTTAAGAAGAGCATGTTCACTTGAACACTTTTGGACACTCTTAATGAAATTTCTGGCTCTGCCAATGAACAACGCTAACAGTATATGTTAATGAAGTTGTGTATTAGTACTTGTTTACTTATGAAGACGACTCTTTTTGTAGTATGGAGCTCTTAGAAGGAAGATTGGTGGAACATACAAAGATTTCTTCAAGTCCTATGTTGAAGGTAATTATATAATAAACTCCTAATTAATTATATTATGTAATGATCTATCTATGGCTTTAATTAATTAACTACTCTTTTTGTTTTTTTGGGAACAAATTAAATTAATAGTGGATGGACAATATGTGGAGGAGGGATGGGTAGACAAAACATGCAAGGTTTGCAAGAAAGATACAAGTGGAGAAGCAAGACAAGTTGACAAAATGGGACGA</genome_strand>
        <mrna_strand>GTTCATACAATATAATGGGGCTTAGGGCTATTCCCTTTTCACCTTCTCAAAATTATTATTTGAGTGGTTCAGAATATTTGCCCAAATGCAGTGTTCTTGGTAGCAGCAGAACTGGCTCATCAAAACTAGTACTAACAATTTCAGCAAAGGCTAAAAAAGATGACGCACAAGAAGAAGAAGAAGAACCAAAAAACAAGAGGAAACAATCGTTGTTTTCAAGTGTAACTGAAGCTCTTGATTTTTCTCAAGTTAGATCTGCAAAGGATGCTGAGCTTCTTGATGAAGCAAGAGAAAAAACTCAATCTGGAGAGAGAATGTCTAAAGAACAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGGAGCTCTTAGAAGGAAGATTGGTGGAACATACAAAGATTTCTTCAAGTCCTATGTTGAAG............................................................................................................TGGATGGACAATATGTGGAGGAGGGATGGGTAGACAAAACATGCAAGGTTTGCAAGAAAGATACAAGTGGAGAAGCAAGACAAGTTGACAAAATGGGACGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0067G18-NJACb/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E476483" ref_strand="+" ref_description="SGN-E476483 [cSTB-45-C17]">
      <seq>cttttcaccttctcaaaattactatttgagtggttcagaatatttccccaaatgcagtattcttcgtagcagcagaatttgctcatcaaaactagtagcaatttcagcaaaggctaaaaaagaggatacacaagaagaagaaccaaaaaataagaggaaacaatctttgttttcaagtgtaactgaagctcttgatttttcccaagttagatcttcaaaggacgctgagcttcttgatgaagcaagagaaaaaacacaatccggagagagaatgtctagagaacagtatggagctctgagaaggaagattggtgggacatacaaagatttcttcaagtcctacgttgaggtggatggacaatatgtggaggagggatgggtagacaaaacgtgcaaggtttgcaagaaagatacgagtggaga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0067G18-NJACb/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0067G18.1" temp_strand="-" temp_description="C06SLm0067G18.1  AC216664.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0067G18 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="8236" stop="6491"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="7936" g_stop="7642" g_length="295"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="286" r_length="286" r_score="0.908"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="7641" i_stop="7036" i_length="606">
            <donor d_prob="0.998" d_score="0.94"/>
            <acceptor a_prob="0.941" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="7035" g_stop="6972" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="287" r_stop="350" r_length="64" r_score="0.938"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="6971" i_stop="6864" i_length="108">
            <donor d_prob="1.000" d_score="0.94"/>
            <acceptor a_prob="0.960" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="6863" g_stop="6791" g_length="73"/>
          <reference_exon_boundary r_type="cDNA" r_start="351" r_stop="423" r_length="73" r_score="0.973"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0067G18.1" gen_strand="-" ref_id="SGN-E476483" ref_strand="+">
        <total_alignment_score>0.924</total_alignment_score>
        <cumulative_length_of_scored_exons>432</cumulative_length_of_scored_exons>
        <coverage percentage="1.021" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0067G18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E476483" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="7936" e_stop="7642"/>
          <exon e_start="7035" e_stop="6972"/>
          <exon e_start="6863" e_stop="6791"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTTCACCTTCTCAAAATTATTATTTGAGTGGTTCAGAATATTTGCCCAAATGCAGTGTTCTTGGTAGCAGCAGAACTGGCTCATCAAAACTAGTACTAACAATTTCAGCAAAGGCTAAAAAAGATGACGCACAAGAAGAAGAAGAAGAACCAAAAAACAAGAGGAAACAATCGTTGTTTTCAAGTGTAACTGAAGCTCTTGATTTTTCTCAAGTTAGATCTGCAAAGGATGCTGAGCTTCTTGATGAAGCAAGAGAAAAAACTCAATCTGGAGAGAGAATGTCTAAAGAACAGGTTAATTCTTATTTCTATAACGCATTATACAGTTATTAAAGCATGTATTAATAATACTCTTTCGTCTTCTGGTAGTTAATTTAGAAAGTAAATTATTCAGATACAAAATAAATAGTGTAATTGGTGAAGCTCACATAACTAACTAATATATGACTACCTACATAAAAAAAATATATATATATATATATAAATTTCCTCGTACATAACTAAGTTACTAATATTTGCATAATTTTTATCAGCTACCAAACGACATTATGGTCACCCTTATGTCAGGTTGTTCAATTGGACACCCTTCGTCATATGAGTAAAATAATAATAAAGTGATTAAATACCATATTTTGAACACCATTGACATAACAATATGATGTATTCTAATGGTTTTAAGTGTCTTGAAAGAGTAAAGACACACAAAATTAATGTGTTTGTATGTTCAAATCTCATTACTAGCCAAAAAAATTCCACTTTTTAAGAAGAGCATGTTCACTTGAACACTTTTGGACACTCTTAATGAAATTTCTGGCTCTGCCAATGAACAACGCTAACAGTATATGTTAATGAAGTTGTGTATTAGTACTTGTTTACTTATGAAGACGACTCTTTTTGTAGTATGGAGCTCTTAGAAGGAAGATTGGTGGAACATACAAAGATTTCTTCAAGTCCTATGTTGAAGGTAATTATATAATAAACTCCTAATTAATTATATTATGTAATGATCTATCTATGGCTTTAATTAATTAACTACTCTTTTTGTTTTTTTGGGAACAAATTAAATTAATAGTGGATGGACAATATGTGGAGGAGGGATGGGTAGACAAAACATGCAAGGTTTGCAAGAAAGATACAAGTGGAGA</genome_strand>
        <mrna_strand>CTTTTCACCTTCTCAAAATTACTATTTGAGTGGTTCAGAATATTTCCCCAAATGCAGTATTCTTCGTAGCAGCAGAATTTGCTCATCAAAACTAG---TAGCAATTTCAGCAAAGGCTAAAAAAGA-G--G-A-TA-CACAAGAAGAAGAACCAAAAAATAAGAGGAAACAATCTTTGTTTTCAAGTGTAACTGAAGCTCTTGATTTTTCCCAAGTTAGATCTTCAAAGGACGCTGAGCTTCTTGATGAAGCAAGAGAAAAAACACAATCCGGAGAGAGAATGTCTAGAGAACAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGGAGCTCTGAGAAGGAAGATTGGTGGGACATACAAAGATTTCTTCAAGTCCTACGTTGAGG............................................................................................................TGGATGGACAATATGTGGAGGAGGGATGGGTAGACAAAACGTGCAAGGTTTGCAAGAAAGATACGAGTGGAGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0067G18-NJACb/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E473127" ref_strand="+" ref_description="SGN-E473127 [cSTB-31-A4]">
      <seq>aaattactatttgagtggttcagaatatttccccaaatgcagtattcttcgtagcagcagaatttgctcatcaaaactagtagcaatctcagcaaaggctataaaagaggatacacaagaagaagaaccaaaaaataagaggaaacaatctttgttttcaagtgtaactgaagctcttgatttttcccaagttagatcttcaaaggacgctgagcttcttgatgaagcaagagaaaaaacacaatccggagagagaatgtctagagaacagtatggagctctgagaaggaagattggtgggacatacaaagatttcttcaagtcctacgttgaggtggatggacaatatgtggaggagggatgggtagacaaaacgtgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0067G18-NJACb/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0067G18.1" temp_strand="-" temp_description="C06SLm0067G18.1  AC216664.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0067G18 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="8221" stop="6520"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="7921" g_stop="7642" g_length="280"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="271" r_length="271" r_score="0.896"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="7641" i_stop="7036" i_length="606">
            <donor d_prob="0.998" d_score="0.94"/>
            <acceptor a_prob="0.941" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="7035" g_stop="6972" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="272" r_stop="335" r_length="64" r_score="0.938"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="6971" i_stop="6864" i_length="108">
            <donor d_prob="1.000" d_score="0.94"/>
            <acceptor a_prob="0.960" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="6863" g_stop="6820" g_length="44"/>
          <reference_exon_boundary r_type="cDNA" r_start="336" r_stop="379" r_length="44" r_score="0.977"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0067G18.1" gen_strand="-" ref_id="SGN-E473127" ref_strand="+">
        <total_alignment_score>0.904</total_alignment_score>
        <cumulative_length_of_scored_exons>388</cumulative_length_of_scored_exons>
        <coverage percentage="1.024" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0067G18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E473127" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="7921" e_stop="7642"/>
          <exon e_start="7035" e_stop="6972"/>
          <exon e_start="6863" e_stop="6820"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAATTATTATTTGAGTGGTTCAGAATATTTGCCCAAATGCAGTGTTCTTGGTAGCAGCAGAACTGGCTCATCAAAACTAGTACTAACAATTTCAGCAAAGGCTAAAAAAGATGACGCACAAGAAGAAGAAGAAGAACCAAAAAACAAGAGGAAACAATCGTTGTTTTCAAGTGTAACTGAAGCTCTTGATTTTTCTCAAGTTAGATCTGCAAAGGATGCTGAGCTTCTTGATGAAGCAAGAGAAAAAACTCAATCTGGAGAGAGAATGTCTAAAGAACAGGTTAATTCTTATTTCTATAACGCATTATACAGTTATTAAAGCATGTATTAATAATACTCTTTCGTCTTCTGGTAGTTAATTTAGAAAGTAAATTATTCAGATACAAAATAAATAGTGTAATTGGTGAAGCTCACATAACTAACTAATATATGACTACCTACATAAAAAAAATATATATATATATATATAAATTTCCTCGTACATAACTAAGTTACTAATATTTGCATAATTTTTATCAGCTACCAAACGACATTATGGTCACCCTTATGTCAGGTTGTTCAATTGGACACCCTTCGTCATATGAGTAAAATAATAATAAAGTGATTAAATACCATATTTTGAACACCATTGACATAACAATATGATGTATTCTAATGGTTTTAAGTGTCTTGAAAGAGTAAAGACACACAAAATTAATGTGTTTGTATGTTCAAATCTCATTACTAGCCAAAAAAATTCCACTTTTTAAGAAGAGCATGTTCACTTGAACACTTTTGGACACTCTTAATGAAATTTCTGGCTCTGCCAATGAACAACGCTAACAGTATATGTTAATGAAGTTGTGTATTAGTACTTGTTTACTTATGAAGACGACTCTTTTTGTAGTATGGAGCTCTTAGAAGGAAGATTGGTGGAACATACAAAGATTTCTTCAAGTCCTATGTTGAAGGTAATTATATAATAAACTCCTAATTAATTATATTATGTAATGATCTATCTATGGCTTTAATTAATTAACTACTCTTTTTGTTTTTTTGGGAACAAATTAAATTAATAGTGGATGGACAATATGTGGAGGAGGGATGGGTAGACAAAACATGC</genome_strand>
        <mrna_strand>AAATTACTATTTGAGTGGTTCAGAATATTTCCCCAAATGCAGTATTCTTCGTAGCAGCAGAATTTGCTCATCAAAACTAGTA---GCAATCTCAGCAAAGGCTATAAAAGA-G--G-A-TA-CACAAGAAGAAGAACCAAAAAATAAGAGGAAACAATCTTTGTTTTCAAGTGTAACTGAAGCTCTTGATTTTTCCCAAGTTAGATCTTCAAAGGACGCTGAGCTTCTTGATGAAGCAAGAGAAAAAACACAATCCGGAGAGAGAATGTCTAGAGAACAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGGAGCTCTGAGAAGGAAGATTGGTGGGACATACAAAGATTTCTTCAAGTCCTACGTTGAGG............................................................................................................TGGATGGACAATATGTGGAGGAGGGATGGGTAGACAAAACGTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0067G18-NJACb/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E473131" ref_strand="+" ref_description="SGN-E473131 [cSTB-31-A16]">
      <seq>tattcccttttcaccttctcaaaattactatttgagtggttcagaatatttccccaaatgcagtattcttcgtagcagcagaatttgctcatcaaaactagtagcaatttcagccaaggctgaaaaagaggatacacaagaagaagaaccaaaaaataagaggaaacaatctttgttttcaagtgtaactgaagctcttgatttttcccaagttagatcttcaaaggacgctgagcttcttgatgaagcaagagaaaaaacacaatccggagagagaatgtctagagaacagtatggagctctgagaaggaagattggtgggacatacaaagatttcttcaagtcctaccttgaggtggatggacaatatgtggaggagggatgggtagacaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0067G18-NJACb/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0067G18.1" temp_strand="-" temp_description="C06SLm0067G18.1  AC216664.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0067G18 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="8242" stop="6525"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="7942" g_stop="7642" g_length="301"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="292" r_length="292" r_score="0.904"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="7641" i_stop="7036" i_length="606">
            <donor d_prob="0.998" d_score="0.94"/>
            <acceptor a_prob="0.941" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="7035" g_stop="6972" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="293" r_stop="356" r_length="64" r_score="0.922"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="6971" i_stop="6864" i_length="108">
            <donor d_prob="1.000" d_score="0.92"/>
            <acceptor a_prob="0.960" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="6863" g_stop="6825" g_length="39"/>
          <reference_exon_boundary r_type="cDNA" r_start="357" r_stop="395" r_length="39" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0067G18.1" gen_strand="-" ref_id="SGN-E473131" ref_strand="+">
        <total_alignment_score>0.907</total_alignment_score>
        <cumulative_length_of_scored_exons>404</cumulative_length_of_scored_exons>
        <coverage percentage="1.023" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0067G18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E473131" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="7942" e_stop="7642"/>
          <exon e_start="7035" e_stop="6972"/>
          <exon e_start="6863" e_stop="6825"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATTCCCTTTTCACCTTCTCAAAATTATTATTTGAGTGGTTCAGAATATTTGCCCAAATGCAGTGTTCTTGGTAGCAGCAGAACTGGCTCATCAAAACTAGTACTAACAATTTCAGCAAAGGCTAAAAAAGATGACGCACAAGAAGAAGAAGAAGAACCAAAAAACAAGAGGAAACAATCGTTGTTTTCAAGTGTAACTGAAGCTCTTGATTTTTCTCAAGTTAGATCTGCAAAGGATGCTGAGCTTCTTGATGAAGCAAGAGAAAAAACTCAATCTGGAGAGAGAATGTCTAAAGAACAGGTTAATTCTTATTTCTATAACGCATTATACAGTTATTAAAGCATGTATTAATAATACTCTTTCGTCTTCTGGTAGTTAATTTAGAAAGTAAATTATTCAGATACAAAATAAATAGTGTAATTGGTGAAGCTCACATAACTAACTAATATATGACTACCTACATAAAAAAAATATATATATATATATATAAATTTCCTCGTACATAACTAAGTTACTAATATTTGCATAATTTTTATCAGCTACCAAACGACATTATGGTCACCCTTATGTCAGGTTGTTCAATTGGACACCCTTCGTCATATGAGTAAAATAATAATAAAGTGATTAAATACCATATTTTGAACACCATTGACATAACAATATGATGTATTCTAATGGTTTTAAGTGTCTTGAAAGAGTAAAGACACACAAAATTAATGTGTTTGTATGTTCAAATCTCATTACTAGCCAAAAAAATTCCACTTTTTAAGAAGAGCATGTTCACTTGAACACTTTTGGACACTCTTAATGAAATTTCTGGCTCTGCCAATGAACAACGCTAACAGTATATGTTAATGAAGTTGTGTATTAGTACTTGTTTACTTATGAAGACGACTCTTTTTGTAGTATGGAGCTCTTAGAAGGAAGATTGGTGGAACATACAAAGATTTCTTCAAGTCCTATGTTGAAGGTAATTATATAATAAACTCCTAATTAATTATATTATGTAATGATCTATCTATGGCTTTAATTAATTAACTACTCTTTTTGTTTTTTTGGGAACAAATTAAATTAATAGTGGATGGACAATATGTGGAGGAGGGATGGGTAGACAAAA</genome_strand>
        <mrna_strand>TATTCCCTTTTCACCTTCTCAAAATTACTATTTGAGTGGTTCAGAATATTTCCCCAAATGCAGTATTCTTCGTAGCAGCAGAATTTGCTCATCAAAACTAG---TAGCAATTTCAGCCAAGGCTGAAAAAGAGGATACAC------AAGAAGAAGAACCAAAAAATAAGAGGAAACAATCTTTGTTTTCAAGTGTAACTGAAGCTCTTGATTTTTCCCAAGTTAGATCTTCAAAGGACGCTGAGCTTCTTGATGAAGCAAGAGAAAAAACACAATCCGGAGAGAGAATGTCTAGAGAACAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGGAGCTCTGAGAAGGAAGATTGGTGGGACATACAAAGATTTCTTCAAGTCCTACCTTGAGG............................................................................................................TGGATGGACAATATGTGGAGGAGGGATGGGTAGACAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0067G18-NJACb/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E278140" ref_strand="+" ref_description="SGN-E278140 [cLER-4-P19]">
      <seq>cgttgttttcaagtgtaactgaagctcttgatttttctcaagttagatctgcaaaggatgctgagcttcttgatgaagcaagagaaaaaactcaatctggagagagaatgtctaaagaacagtatggagctcttagaaggaagattggtggaacatacaaagatttcttcaagtcctatgttgaagtggatggacaatatgtggaggagggatgggt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0067G18-NJACb/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0067G18.1" temp_strand="-" temp_description="C06SLm0067G18.1  AC216664.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0067G18 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="8063" stop="6533"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="7763" g_stop="7642" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="122" r_length="122" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="7641" i_stop="7036" i_length="606">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.941" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="7035" g_stop="6972" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="123" r_stop="186" r_length="64" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="6971" i_stop="6864" i_length="108">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.960" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="6863" g_stop="6833" g_length="31"/>
          <reference_exon_boundary r_type="cDNA" r_start="187" r_stop="217" r_length="31" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0067G18.1" gen_strand="-" ref_id="SGN-E278140" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>217</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0067G18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E278140" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="7763" e_stop="7642"/>
          <exon e_start="7035" e_stop="6972"/>
          <exon e_start="6863" e_stop="6833"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGTTGTTTTCAAGTGTAACTGAAGCTCTTGATTTTTCTCAAGTTAGATCTGCAAAGGATGCTGAGCTTCTTGATGAAGCAAGAGAAAAAACTCAATCTGGAGAGAGAATGTCTAAAGAACAGGTTAATTCTTATTTCTATAACGCATTATACAGTTATTAAAGCATGTATTAATAATACTCTTTCGTCTTCTGGTAGTTAATTTAGAAAGTAAATTATTCAGATACAAAATAAATAGTGTAATTGGTGAAGCTCACATAACTAACTAATATATGACTACCTACATAAAAAAAATATATATATATATATATAAATTTCCTCGTACATAACTAAGTTACTAATATTTGCATAATTTTTATCAGCTACCAAACGACATTATGGTCACCCTTATGTCAGGTTGTTCAATTGGACACCCTTCGTCATATGAGTAAAATAATAATAAAGTGATTAAATACCATATTTTGAACACCATTGACATAACAATATGATGTATTCTAATGGTTTTAAGTGTCTTGAAAGAGTAAAGACACACAAAATTAATGTGTTTGTATGTTCAAATCTCATTACTAGCCAAAAAAATTCCACTTTTTAAGAAGAGCATGTTCACTTGAACACTTTTGGACACTCTTAATGAAATTTCTGGCTCTGCCAATGAACAACGCTAACAGTATATGTTAATGAAGTTGTGTATTAGTACTTGTTTACTTATGAAGACGACTCTTTTTGTAGTATGGAGCTCTTAGAAGGAAGATTGGTGGAACATACAAAGATTTCTTCAAGTCCTATGTTGAAGGTAATTATATAATAAACTCCTAATTAATTATATTATGTAATGATCTATCTATGGCTTTAATTAATTAACTACTCTTTTTGTTTTTTTGGGAACAAATTAAATTAATAGTGGATGGACAATATGTGGAGGAGGGATGGGT</genome_strand>
        <mrna_strand>CGTTGTTTTCAAGTGTAACTGAAGCTCTTGATTTTTCTCAAGTTAGATCTGCAAAGGATGCTGAGCTTCTTGATGAAGCAAGAGAAAAAACTCAATCTGGAGAGAGAATGTCTAAAGAACAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGGAGCTCTTAGAAGGAAGATTGGTGGAACATACAAAGATTTCTTCAAGTCCTATGTTGAAG............................................................................................................TGGATGGACAATATGTGGAGGAGGGATGGGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0067G18-NJACb/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E311140" ref_strand="+" ref_description="SGN-E311140 [cLEZ-16-N11]">
      <seq>ataatggggcttagggctattcccttttcaccttctcaaaattattatttgagtggttcagaatatttgcccaaatgcagtgttcttggtagcagcagaactggctcatcaaaactagtactaacaatttcagcaaaggctaaaaaagatgacgcacaagaagaagaagaagaaccaaaaaacaagaggaaacaatcgttgttttcaagtgtaactgaagctcttgatttttctcaagttagatctgcaaaggatgctgagcttcttgatgaagcaagagaaaaaactcaatctggagagagaatgtctaaagaacagtatggagctcttagaaggaagattggtggaacatacaaagatttcttcaagtcctatgttgaaggtaattatataataaactcctaattaattatattatgtaatgatctatcta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0067G18-NJACb/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0067G18.1" temp_strand="-" temp_description="C06SLm0067G18.1  AC216664.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0067G18 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="8259" stop="6621"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="7959" g_stop="7642" g_length="318"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="318" r_length="318" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="7641" i_stop="7036" i_length="606">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.941" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="7035" g_stop="6921" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="319" r_stop="433" r_length="115" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0067G18.1" gen_strand="-" ref_id="SGN-E311140" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>433</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0067G18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E311140" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="7959" e_stop="7642"/>
          <exon e_start="7035" e_stop="6921"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATAATGGGGCTTAGGGCTATTCCCTTTTCACCTTCTCAAAATTATTATTTGAGTGGTTCAGAATATTTGCCCAAATGCAGTGTTCTTGGTAGCAGCAGAACTGGCTCATCAAAACTAGTACTAACAATTTCAGCAAAGGCTAAAAAAGATGACGCACAAGAAGAAGAAGAAGAACCAAAAAACAAGAGGAAACAATCGTTGTTTTCAAGTGTAACTGAAGCTCTTGATTTTTCTCAAGTTAGATCTGCAAAGGATGCTGAGCTTCTTGATGAAGCAAGAGAAAAAACTCAATCTGGAGAGAGAATGTCTAAAGAACAGGTTAATTCTTATTTCTATAACGCATTATACAGTTATTAAAGCATGTATTAATAATACTCTTTCGTCTTCTGGTAGTTAATTTAGAAAGTAAATTATTCAGATACAAAATAAATAGTGTAATTGGTGAAGCTCACATAACTAACTAATATATGACTACCTACATAAAAAAAATATATATATATATATATAAATTTCCTCGTACATAACTAAGTTACTAATATTTGCATAATTTTTATCAGCTACCAAACGACATTATGGTCACCCTTATGTCAGGTTGTTCAATTGGACACCCTTCGTCATATGAGTAAAATAATAATAAAGTGATTAAATACCATATTTTGAACACCATTGACATAACAATATGATGTATTCTAATGGTTTTAAGTGTCTTGAAAGAGTAAAGACACACAAAATTAATGTGTTTGTATGTTCAAATCTCATTACTAGCCAAAAAAATTCCACTTTTTAAGAAGAGCATGTTCACTTGAACACTTTTGGACACTCTTAATGAAATTTCTGGCTCTGCCAATGAACAACGCTAACAGTATATGTTAATGAAGTTGTGTATTAGTACTTGTTTACTTATGAAGACGACTCTTTTTGTAGTATGGAGCTCTTAGAAGGAAGATTGGTGGAACATACAAAGATTTCTTCAAGTCCTATGTTGAAGGTAATTATATAATAAACTCCTAATTAATTATATTATGTAATGATCTATCTA</genome_strand>
        <mrna_strand>ATAATGGGGCTTAGGGCTATTCCCTTTTCACCTTCTCAAAATTATTATTTGAGTGGTTCAGAATATTTGCCCAAATGCAGTGTTCTTGGTAGCAGCAGAACTGGCTCATCAAAACTAGTACTAACAATTTCAGCAAAGGCTAAAAAAGATGACGCACAAGAAGAAGAAGAAGAACCAAAAAACAAGAGGAAACAATCGTTGTTTTCAAGTGTAACTGAAGCTCTTGATTTTTCTCAAGTTAGATCTGCAAAGGATGCTGAGCTTCTTGATGAAGCAAGAGAAAAAACTCAATCTGGAGAGAGAATGTCTAAAGAACAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGGAGCTCTTAGAAGGAAGATTGGTGGAACATACAAAGATTTCTTCAAGTCCTATGTTGAAGGTAATTATATAATAAACTCCTAATTAATTATATTATGTAATGATCTATCTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0067G18-NJACb/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E416180" ref_strand="-" ref_description="SGN-E416180 [STM-22-L9]">
      <seq>agtaagctggctgatttcatccggtatgattggtacaaggcacatggaatcatcgacgcatgcaacgaggatgactgctcacgttctggtgcatcgtcaggagaatgtagactgaccgttataggaactctagatttgtcaggcacaccagctttcgaactcgaagaaaccatgcagcctgcaagcgtgtctatcgggttccctacagttgaaagtgtgacagatgtgatagagatgcaacctgtggaaagaagagtgagatttgccatagataacgagtcggaagtggattcacgggacgaaatgagttctcagctgcaggaagagctagaagatttatatacagcacaacaagcaggtacagcattcgtactaggacattcacacgtgaaagcaaaacaaggatcatctgtgttgaagaggttggctataaattatggttataatttccttaggaggaattgcagaggtgcagatgtatcccttaaagttcctccagcatcccttcttgaagttggcatggtctacattgtttaattaaatcatttcactttactcatatagctatgtatcttattaggaccttatttagagaggtaaatgaaattattgtgcagattactgaagttttttagtgaatctcttatctactcaaaaaaaaaaaagtat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0067G18-NJACb/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0067G18.1" temp_strand="-" temp_description="C06SLm0067G18.1  AC216664.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0067G18 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="9287" stop="8034"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="8987" g_stop="8336" g_length="652"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="630" r_length="630" r_score="0.914"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="654" polyA_stop="666"/>
      <MATCH_line gen_id="C06SLm0067G18.1" gen_strand="-" ref_id="SGN-E416180" ref_strand="-">
        <total_alignment_score>0.914</total_alignment_score>
        <cumulative_length_of_scored_exons>652</cumulative_length_of_scored_exons>
        <coverage percentage="0.975" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0067G18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E416180" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="8987" e_stop="8336"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTAGGCTGGCTGATTTCATCCGGTATGATTGGTACAAGGCACATGGAATCATGGAGACATGCAACGAGGATGACTGCTCACGTTCTGGTGCATCGTCAGGAGAATGTAGACTGACCGTTATAGGAACTCTAGATTTGTCATGCGCACCAGCTTTTGAAGTCGAAGAAACCATGCAGCCTGCAAGCGTGTCTGTGGGTTTTCCTACAGTTGAAAGTGTAACGGATGTGATAGAGATGCAAGCAGTGGAAAGAAGGGTGAGATTTGCGATAGATGACGAGTCGGAAGTGGATTCACGGGACGTAATGGATTGTCAGCTGCAGGGAGAGCTAGAAGATTTATACACAGCACAACAAGCAGGTACAGCATTTGTGCTAGGACATTCACACGTGAAAGCAAAACAAGGATCATCTGTGTTGAAGAGGTTGGCTATAAATTATGGTTATAATTTCCTTAGGAGGAATTGCAGAGGTGCAGATGTATCCCTTAAAGTTCCTCCAGCATCCCTTCTTGAAGTTGGCATGGTCTACATTGTTTAGTTATATATATATATATATATCATTTTTTCACTTTACTTTACTCCTATAGCTATGTAACTTATTAGGACCTTCTTTAGTGAGGTAAATATAATTATTATGCAGATTACTGAAGTTT</genome_strand>
        <mrna_strand>AGTAAGCTGGCTGATTTCATCCGGTATGATTGGTACAAGGCACATGGAATCATCGACGCATGCAACGAGGATGACTGCTCACGTTCTGGTGCATCGTCAGGAGAATGTAGACTGACCGTTATAGGAACTCTAGATTTGTCAGGCACACCAGCTTTCGAACTCGAAGAAACCATGCAGCCTGCAAGCGTGTCTATCGGGTTCCCTACAGTTGAAAGTGTGACAGATGTGATAGAGATGCAACCTGTGGAAAGAAGAGTGAGATTTGCCATAGATAACGAGTCGGAAGTGGATTCACGGGACGAAATGAGTTCTCAGCTGCAGGAAGAGCTAGAAGATTTATATACAGCACAACAAGCAGGTACAGCATTCGTACTAGGACATTCACACGTGAAAGCAAAACAAGGATCATCTGTGTTGAAGAGGTTGGCTATAAATTATGGTTATAATTTCCTTAGGAGGAATTGCAGAGGTGCAGATGTATCCCTTAAAGTTCCTCCAGCATCCCTTCTTGAAGTTGGCATGGTCTACA----TT-G---T-T-TA-AT-TA-A-ATCA---TTT--C---ACTTTACTCATATAGCTATGTATCTTATTAGGACCTTATTTAGAGAGGTAAATGAAATTATTGTGCAGATTACTGAAGTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0067G18-NJACb/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E486530" ref_strand="+" ref_description="SGN-E486530 [cSTE-22-M22]">
      <seq>ccggatacttgttttcgtgtgtgtgaaatccgtgccagtcccttttgttcccccagctgagagatacctcgtaggccgtgttggtcctgcagctcatcgttcctatagatgcattgtccgttatggttaccgtgacgttcaccaggatgtcgactcctttgaatccgaactagtcagtaagctggctgatttcatccggtatgattggtacaaggcacatggaatcatcgacgcatgcaacgaggatgactgctcacgttctggtgcatcgtcaggagaatgtagactgaccgttataggaactctagatttgtcaggcacaccagctttcgaactcgaagaaaccatgcagcctgcaagcgtgtctatcgggttccctacagttgaaagtgtgacagatgtgatagagatgcaacctgtggaaagaagagtgagatttgccatagataacgagtcggaagtggattcacgggacgaaatgagttctcagctgcaggaagagctagaagatttatatacagcacaacaagcaggtacagcattcgtactaggacattcacacgtgaaagcaaaacaaggatcatctgtgttgaagaggttggctataaattatggttataatttccttaggaggaattgcagaggtgcagatgtatccccttaagttcctccagcatcccttcttgaaagtggcatggtctacattgttaantttaatcatttcactttactcatatagctatgtatctta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0067G18-NJACb/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0067G18.1" temp_strand="-" temp_description="C06SLm0067G18.1  AC216664.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0067G18 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="9462" stop="8128"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="9162" g_stop="8457" g_length="706"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="706" r_length="706" r_score="0.948"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0067G18.1" gen_strand="-" ref_id="SGN-E486530" ref_strand="+">
        <total_alignment_score>0.948</total_alignment_score>
        <cumulative_length_of_scored_exons>706</cumulative_length_of_scored_exons>
        <coverage percentage="0.940" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0067G18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E486530" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="9162" e_stop="8457"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCGGATACTTGTTTTCGTGTGTGTGAAATCGGTGCCTGTCCCTTTTGTTCCCCCAGCTGAGAGGTACCTCGTAGGCCGTGTTGGTCCTGCAGCTCATCGTTCCTATAGATGCATTGTCCGTTATGGTTACCGTGATGTTCACCAGGATGTTGACTCCTTTGAATCCGAACTTGTCAGTAGGCTGGCTGATTTCATCCGGTATGATTGGTACAAGGCACATGGAATCATGGAGACATGCAACGAGGATGACTGCTCACGTTCTGGTGCATCGTCAGGAGAATGTAGACTGACCGTTATAGGAACTCTAGATTTGTCATGCGCACCAGCTTTTGAAGTCGAAGAAACCATGCAGCCTGCAAGCGTGTCTGTGGGTTTTCCTACAGTTGAAAGTGTAACGGATGTGATAGAGATGCAAGCAGTGGAAAGAAGGGTGAGATTTGCGATAGATGACGAGTCGGAAGTGGATTCACGGGACGTAATGGATTGTCAGCTGCAGGGAGAGCTAGAAGATTTATACACAGCACAACAAGCAGGTACAGCATTTGTGCTAGGACATTCACACGTGAAAGCAAAACAAGGATCATCTGTGTTGAAGAGGTTGGCTATAAATTATGGTTATAATTTCCTTAGGAGGAATTGCAGAGGTGCAGATGTATCCCTTAAAGTTCCTCCAGCATCCCTTCTTGAAGTTGGCATGGTCTACATT</genome_strand>
        <mrna_strand>CCGGATACTTGTTTTCGTGTGTGTGAAATCCGTGCCAGTCCCTTTTGTTCCCCCAGCTGAGAGATACCTCGTAGGCCGTGTTGGTCCTGCAGCTCATCGTTCCTATAGATGCATTGTCCGTTATGGTTACCGTGACGTTCACCAGGATGTCGACTCCTTTGAATCCGAACTAGTCAGTAAGCTGGCTGATTTCATCCGGTATGATTGGTACAAGGCACATGGAATCATCGACGCATGCAACGAGGATGACTGCTCACGTTCTGGTGCATCGTCAGGAGAATGTAGACTGACCGTTATAGGAACTCTAGATTTGTCAGGCACACCAGCTTTCGAACTCGAAGAAACCATGCAGCCTGCAAGCGTGTCTATCGGGTTCCCTACAGTTGAAAGTGTGACAGATGTGATAGAGATGCAACCTGTGGAAAGAAGAGTGAGATTTGCCATAGATAACGAGTCGGAAGTGGATTCACGGGACGAAATGAGTTCTCAGCTGCAGGAAGAGCTAGAAGATTTATATACAGCACAACAAGCAGGTACAGCATTCGTACTAGGACATTCACACGTGAAAGCAAAACAAGGATCATCTGTGTTGAAGAGGTTGGCTATAAATTATGGTTATAATTTCCTTAGGAGGAATTGCAGAGGTGCAGATGTATCCCCTTAAGTTCCTCCAGCATCCCTTCTTGAAAGTGGCATGGTCTACATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0067G18-NJACb/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E486609" ref_strand="+" ref_description="SGN-E486609 [cSTE-22-N21]">
      <seq>ccggatacttgttttcgtgtgtgtgaaatccgtgccagtcccttttgttcccccagctgagagatacctcgtaggccgtgttggtcctgcagctcatcgttcctatagatgcattgtccgttatggttaccgtgacgttcaccaggatgtcgactcctttgaatccgaactagtcagtaagctggctgatttcatccggtatgattggtacaaggcacatggaatcatcgacgcatgcaacgaggatgactgctcacgttctggtgcatcgtcaggagaatgtagactgaccgttataggaactctagatttgtcaggcacaccagctttcgaactcgaagaaaccatgcagcctgcaagcgtgtctatcgggttccctacagttgaaagtgtgacagatgtgatagagatgcaacctgtggaaagaagagtgagatttgccatagataacgagtcggaagtggattcacgggacgaaatgagttctcagctgcaggaagagctagaagatttatatacagcacaacaagcaggtacagcattcgtactaggacattcacacgtgaaagcaaaacaaggatcatctgtgttgaagaggttggctataaattatggttataatttccttaggaggaattgcagaggtgcagatgtatcccttaaagttcctccagcatcccttcttgaagttggcatggtctacattgtttaattaaatcatttcactttactcatatagctatgtatct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0067G18-NJACb/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0067G18.1" temp_strand="-" temp_description="C06SLm0067G18.1  AC216664.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0067G18 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="9462" stop="8119"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="9162" g_stop="8457" g_length="706"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="706" r_length="706" r_score="0.953"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0067G18.1" gen_strand="-" ref_id="SGN-E486609" ref_strand="+">
        <total_alignment_score>0.953</total_alignment_score>
        <cumulative_length_of_scored_exons>706</cumulative_length_of_scored_exons>
        <coverage percentage="0.943" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0067G18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E486609" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="9162" e_stop="8457"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCGGATACTTGTTTTCGTGTGTGTGAAATCGGTGCCTGTCCCTTTTGTTCCCCCAGCTGAGAGGTACCTCGTAGGCCGTGTTGGTCCTGCAGCTCATCGTTCCTATAGATGCATTGTCCGTTATGGTTACCGTGATGTTCACCAGGATGTTGACTCCTTTGAATCCGAACTTGTCAGTAGGCTGGCTGATTTCATCCGGTATGATTGGTACAAGGCACATGGAATCATGGAGACATGCAACGAGGATGACTGCTCACGTTCTGGTGCATCGTCAGGAGAATGTAGACTGACCGTTATAGGAACTCTAGATTTGTCATGCGCACCAGCTTTTGAAGTCGAAGAAACCATGCAGCCTGCAAGCGTGTCTGTGGGTTTTCCTACAGTTGAAAGTGTAACGGATGTGATAGAGATGCAAGCAGTGGAAAGAAGGGTGAGATTTGCGATAGATGACGAGTCGGAAGTGGATTCACGGGACGTAATGGATTGTCAGCTGCAGGGAGAGCTAGAAGATTTATACACAGCACAACAAGCAGGTACAGCATTTGTGCTAGGACATTCACACGTGAAAGCAAAACAAGGATCATCTGTGTTGAAGAGGTTGGCTATAAATTATGGTTATAATTTCCTTAGGAGGAATTGCAGAGGTGCAGATGTATCCCTTAAAGTTCCTCCAGCATCCCTTCTTGAAGTTGGCATGGTCTACATT</genome_strand>
        <mrna_strand>CCGGATACTTGTTTTCGTGTGTGTGAAATCCGTGCCAGTCCCTTTTGTTCCCCCAGCTGAGAGATACCTCGTAGGCCGTGTTGGTCCTGCAGCTCATCGTTCCTATAGATGCATTGTCCGTTATGGTTACCGTGACGTTCACCAGGATGTCGACTCCTTTGAATCCGAACTAGTCAGTAAGCTGGCTGATTTCATCCGGTATGATTGGTACAAGGCACATGGAATCATCGACGCATGCAACGAGGATGACTGCTCACGTTCTGGTGCATCGTCAGGAGAATGTAGACTGACCGTTATAGGAACTCTAGATTTGTCAGGCACACCAGCTTTCGAACTCGAAGAAACCATGCAGCCTGCAAGCGTGTCTATCGGGTTCCCTACAGTTGAAAGTGTGACAGATGTGATAGAGATGCAACCTGTGGAAAGAAGAGTGAGATTTGCCATAGATAACGAGTCGGAAGTGGATTCACGGGACGAAATGAGTTCTCAGCTGCAGGAAGAGCTAGAAGATTTATATACAGCACAACAAGCAGGTACAGCATTCGTACTAGGACATTCACACGTGAAAGCAAAACAAGGATCATCTGTGTTGAAGAGGTTGGCTATAAATTATGGTTATAATTTCCTTAGGAGGAATTGCAGAGGTGCAGATGTATCCCTTAAAGTTCCTCCAGCATCCCTTCTTGAAGTTGGCATGGTCTACATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0067G18-NJACb/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E427358" ref_strand="+" ref_description="SGN-E427358 [STM-48-G2]">
      <seq>ccggatacttgttttcgtgtgtgtgaaatccgtgccagtcccttttgttcccccagctgagagatacctcgtaggccgtgttggtcctgcagctcatcgttcctatagatgcattgtccgttatggttaccgtgacgttcaccaggatgtcgactcctttgaatccgaactagtcagtaagctggctgatttcatccggtatgattggtacaaggcacatggaatcatcgacgcatgcaacgaggatgactgctcacgttctggtgcatcgtcaggagaatgtagactgaccgttataggaactctagatttgtcaggcacaccagctttcgaactcgaagaaaccatgcagcctgcaagcgtgtctatcgggttccctacagttgaaagtgtgacagatgtgatagagatgcaacctgtggaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0067G18-NJACb/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0067G18.1" temp_strand="-" temp_description="C06SLm0067G18.1  AC216664.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0067G18 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="9462" stop="8439"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="9162" g_stop="8739" g_length="424"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="424" r_length="424" r_score="0.948"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0067G18.1" gen_strand="-" ref_id="SGN-E427358" ref_strand="+">
        <total_alignment_score>0.948</total_alignment_score>
        <cumulative_length_of_scored_exons>424</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0067G18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E427358" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="9162" e_stop="8739"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCGGATACTTGTTTTCGTGTGTGTGAAATCGGTGCCTGTCCCTTTTGTTCCCCCAGCTGAGAGGTACCTCGTAGGCCGTGTTGGTCCTGCAGCTCATCGTTCCTATAGATGCATTGTCCGTTATGGTTACCGTGATGTTCACCAGGATGTTGACTCCTTTGAATCCGAACTTGTCAGTAGGCTGGCTGATTTCATCCGGTATGATTGGTACAAGGCACATGGAATCATGGAGACATGCAACGAGGATGACTGCTCACGTTCTGGTGCATCGTCAGGAGAATGTAGACTGACCGTTATAGGAACTCTAGATTTGTCATGCGCACCAGCTTTTGAAGTCGAAGAAACCATGCAGCCTGCAAGCGTGTCTGTGGGTTTTCCTACAGTTGAAAGTGTAACGGATGTGATAGAGATGCAAGCAGTGGAA</genome_strand>
        <mrna_strand>CCGGATACTTGTTTTCGTGTGTGTGAAATCCGTGCCAGTCCCTTTTGTTCCCCCAGCTGAGAGATACCTCGTAGGCCGTGTTGGTCCTGCAGCTCATCGTTCCTATAGATGCATTGTCCGTTATGGTTACCGTGACGTTCACCAGGATGTCGACTCCTTTGAATCCGAACTAGTCAGTAAGCTGGCTGATTTCATCCGGTATGATTGGTACAAGGCACATGGAATCATCGACGCATGCAACGAGGATGACTGCTCACGTTCTGGTGCATCGTCAGGAGAATGTAGACTGACCGTTATAGGAACTCTAGATTTGTCAGGCACACCAGCTTTCGAACTCGAAGAAACCATGCAGCCTGCAAGCGTGTCTATCGGGTTCCCTACAGTTGAAAGTGTGACAGATGTGATAGAGATGCAACCTGTGGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0067G18-NJACb/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E329372" ref_strand="+" ref_description="SGN-E329372 [cTOD-2-C18]">
      <seq>taaacatttcttttctattcttttgttttcggatcaggctcttttctatcttctctatatgaatgaagttgtatagaagctcagcaagcacttaacttggaacttgagtgtatatcttaaagagtcacagattcatcctttaccaattgcaggactagcactgatggcggggatgctcatgaccacttgccttacttcattagtgatcatcctctgctggaacaagcctccaatactggcccttggatttatacttgtgttggggtctattgaaatactctacttctcagactccgtcatcaagtttcttgaaagtgcttggctaccaatcctgcttgcactatatgtggttactgccatgtttgtttggcactacgccacagctaaaaagtgtgaatatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0067G18-NJACb/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0067G18.1" temp_strand="-" temp_description="C06SLm0067G18.1  AC216664.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0067G18 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="10017" stop="9017"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="9717" g_stop="9317" g_length="401"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="401" r_length="401" r_score="0.925"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0067G18.1" gen_strand="-" ref_id="SGN-E329372" ref_strand="+">
        <total_alignment_score>0.925</total_alignment_score>
        <cumulative_length_of_scored_exons>401</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0067G18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E329372" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="9717" e_stop="9317"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAAACAGCTCTTTTCTTTTCTTTTGTTTTCCTATTAGTCTCTTTTCTATCTTCTCTATATGAATGAAGTTGTATAGAAGCTCAGCAAGCACTTAACTTGGAACTTCAGTGTATATCTTAAGGTGTCACAGTTTCATCCTTTACCAATTGCAGGACTAGCAGTGATGGCGGTGATGCTAGTGACCACTTGCCTTACTTCATTAGTTATCATCCTCTGCTGGAACAAGCCTCCAATACTGGCCCTTGGATTTCTCCTTGTGTTTGGGTCTATTGAGTTACTCTACTTCTCAGCCTCCGTCATCAAGTTTCTTGAAGGTGCTTGGCTTCCAATCCTGCTTGCACTCTTTTTGGTTACTGTCATGTTTGTTTGGCACTACGCCACAGTTAAAAAGTATGAATATG</genome_strand>
        <mrna_strand>TAAACATTTCTTTTCTATTCTTTTGTTTTCGGATCAGGCTCTTTTCTATCTTCTCTATATGAATGAAGTTGTATAGAAGCTCAGCAAGCACTTAACTTGGAACTTGAGTGTATATCTTAAAGAGTCACAGATTCATCCTTTACCAATTGCAGGACTAGCACTGATGGCGGGGATGCTCATGACCACTTGCCTTACTTCATTAGTGATCATCCTCTGCTGGAACAAGCCTCCAATACTGGCCCTTGGATTTATACTTGTGTTGGGGTCTATTGAAATACTCTACTTCTCAGACTCCGTCATCAAGTTTCTTGAAAGTGCTTGGCTACCAATCCTGCTTGCACTATATGTGGTTACTGCCATGTTTGTTTGGCACTACGCCACAGCTAAAAAGTGTGAATATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0067G18-NJACb/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E573544" ref_strand="+" ref_description="SGN-E573544 [32871]">
      <seq>cctcgtgccgaattcggcacgagggtggtacttttgcgctctattccttaatatgcaggcatgccaaagttagccttctgcctaacaggcaagttgctgatgaagctctttctacctacaaacttgagcatcctcctgagatgaagaacagctcaaagttgaagttgcttcttgagaagcacaagtccttacacactgctttgctgattttggtgcttcttggcacttgtatggtgattggagatgggctgcttactccagccatatctgtattctctgcggtctctggccttgagttatcgatgtctcgggagcatcatcaatatgcagtgattccaataacttgcttcatattggtctgcctattcgcattacaacattatggcacacatcgagttggttttgtttttgcaccaattgtgatgacctggttactctgcattagtgctcttgggttatacaacattatccactggaatccacaggtttataaagctctttccccctattacatggtaaagttcctgaagaaaacaagaaaaggtggatggatgtctttgggtggaattctggtctgcataactggttctgaagcaatgtttgctgatcttgggcatttctcatatactgcaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0067G18-NJACb/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0067G18.1" temp_strand="-" temp_description="C06SLm0067G18.1  AC216664.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0067G18 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="15404" stop="11459"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15103" g_stop="14858" g_length="246"/>
          <reference_exon_boundary r_type="cDNA" r_start="25" r_stop="270" r_length="246" r_score="0.967"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="14857" i_stop="14777" i_length="81">
            <donor d_prob="0.990" d_score="0.98"/>
            <acceptor a_prob="0.847" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="14776" g_stop="14723" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="271" r_stop="324" r_length="54" r_score="0.981"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="14722" i_stop="12990" i_length="1733">
            <donor d_prob="0.985" d_score="0.98"/>
            <acceptor a_prob="0.996" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="12989" g_stop="12729" g_length="261"/>
          <reference_exon_boundary r_type="cDNA" r_start="325" r_stop="585" r_length="261" r_score="0.981"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="12728" i_stop="11807" i_length="922">
            <donor d_prob="0.965" d_score="0.98"/>
            <acceptor a_prob="0.987" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="11806" g_stop="11759" g_length="48"/>
          <reference_exon_boundary r_type="cDNA" r_start="586" r_stop="633" r_length="48" r_score="0.979"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0067G18.1" gen_strand="-" ref_id="SGN-E573544" ref_strand="+">
        <total_alignment_score>0.975</total_alignment_score>
        <cumulative_length_of_scored_exons>609</cumulative_length_of_scored_exons>
        <coverage percentage="0.962" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0067G18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E573544" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15103" e_stop="14858"/>
          <exon e_start="14776" e_stop="14723"/>
          <exon e_start="12989" e_stop="12729"/>
          <exon e_start="11806" e_stop="11759"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGGTACTTTTGCGCTCTATTCCTTAATATGCAGGCATGCCAAAGTTAGCCTTCTACCTAACAGACAAGTTGCTGATGAAGCTCTTTCTACCTACAAACTTGAGCACCCTCCTGAGATGAAGAACAGCTCAAAGTTGAAGTTGCTTCTTGAGAAGCATAAGTCCTTACACACTGCTCTGCTAATTTTGGTACTTCTTGGCACTTGTATGGTGATTGGAGATGGGCTGCTTACTCCAGCCATATCCGGTATGGTAGGCTGTTTTGCATCAAATTTATCTTCTCTAGAATTATGGTAGATGCTGACATGGAATCTTCTTCCAACTGCAGTATTCTCTGCGGTCTCTGGTCTTGAGTTATCGATGTCTCGGGAGCATCATCAATGTAAGCTGCTTTGTCTACAACGAAACTACTTCCTGAAAACTGAAATGTGTTGTTCTTGTAGCCCACCATTTTGTTATCAATTACACTTTAGAAGTTGCATCAAAGAAATTAAAGTAATTTAATTAGTATGTCTTGTTCCTATCTTTTACTACTTTTTTTGTAATATCCTTGTCTTGGTACAAAATCAAAGTATGGAGCAATTGATTGTGTTACAGAATATAAAGAAAAACTGTGAGACAATCCAGTGTGTCTATACTTAATTAACTTATCTGTTCAGACTTCAGTATCAATCAGCATTTCAGTAATCATGGATAAGGATATCTGTCTTCCTCTCTGTTCCATCTTCTCATTACCCATTTCTAACCTTCTCAGCCTTAATGACCAAATTGGCCGAGAAAACTTCCACCGTTGTCAATGCACAGACCTTGTAATTGTACTTCCTGGTAATAGTAGGGGACTCACTATTATTCTATTACAATCTGGTGGCTGGTTACAGGCAGAGAGCATACAGTAGAGAGAGAGAAGAAAATCTTAAAAAAATTTCTTTGTATGGCTACAACTTAATCACTATTTAGTATGTACTATCTACATGGAAAAGGGAAAGATATAATTGCTGTAATAGTAGGGCACTCACTTGTGTGGAATATTTACCTTTCTTTTCAAGCTCAAACTCACTTCTGGGATAACAATCACTCTGTCAAACTTAGGTTTTGCTTCTGACCAGGTAAAGAATCTCATAGTACCATTTAACACAAAAAGAAGAGCCAAAAGAAAAATGTATCTCTTTGGAGTGACTGTGTCAGCCTTCCAAAAGGTGTTATGACCAATGTCAACATATCTTTCAACTGAAAATAATATATTTGGCAAAAAAACTTGTAGTTGCCATAATTTTTCTCACTGGTCAAATTTACCAGTGTCATTGTTTCTTTTAACTGAAAGGAAAATGTTGTTTTTCTATAAGGACTTTCCTCTTAAATTGTACAAGGTAATGTATTATGTATCTGATAAGTCAGTGTTCTTTTTCCAACTTTCTGGTGACAACAGCTGGGAAAAATCCATCTCTTTCCATCTCTAAGTTCGCTAAACTTGCTTCCTTCTTTCTTTCTTTCTTTCATGGAGCTGATCTTAATAGACATCTCTTCAGTTTTGGTAGATGGAAGATTTGGTGAATCAATTCAATTAGATGTCACTTAGGCACTTACCTATTTATGTATGGTATTTTATCAAAACAAGATATTAGGGCAAATAAGAAATGAACTTCATTCTCCATGACATAAATACAGAGCGATGAGTTGAAACAAGAAGTTCACCTTGACTGAGATGGTATTACATCTAAAGAAAAGAACAGTTTGTTTGTTTTTTTTTTCTTTTTTTTTTTTGGGGGGGGGGGGGGGGGCTGGGGAGGGGGTACTTGTGCAGGGGCAGACTTAAATTAGCCAACTATTTTGAGTTTTCCAATGTTATCCTCTTATATTTCTTGTTGGTATTTAGTTAAAGGATGAGTGTGGGAAGCAACAGAAGAGATTTGACATTAATATCTTTTCTACTGAGTTATATTTCTTTGTCTCTTCCTTACTTTTCTAGATATACCTGCTGCATAAGAGTTAACCACTACAGATCTTTACAGAATTTATTGTTAAACTTTGATTCCTTAGTACATCCATGTTTGTTTGTTTGTTTGTTTGTTTTGACAAAAGTACTGTTGAATTACATCCATGTTTTTGCTTATGCAGATGCAGTGATTCCAATAACTTGCTTCATATTGATCTGCCTATTCGCATTACAACATTATGGCACACATCGAGTTGGTTTTTGTTTTGCACCAATTGTGATGACCTGGTTACTCTGCATTAGTGCTCTTGGGTTATACAACATTATCCACTGGAATCCACAGGTTTACAAAGCTCTTTCCCCCTATTACATGGTAAAGTTCCTGAAGAAAACAAGAAAAGGTGGATGGATGTCTTTGGGTGGAATTCTGCTCTGCATAACTGGTAATATGTCTCCTTACGCTTTGTATTTTTGTATTAGAGTGGTCATAAGTTCTGTTTTTGGATTAGAGTGGTCATAAGTTCTGTTTCATTGGTATATCCAATATGCAGCTTTATATAAATCAGGTGCTGCCATCGAGAACAAGCTAAAAGTGATGCTATTATATGTACCTTGCTTTCTGTAGGTTAACATGTTCATATGTCAGACGCCTGTTCCATAGTATCTAAAAGCTTGTCAATTGGCAAATATAAGGTCCAATTTGTGGTAGTACATGATCTATGGGTCTAGGATTTGTTGAAGTCTATTTTCGTAAAACATGACATGAAATACTTGATCGAAATTAATAGTATGAGAGCACTTGGATAAAGGATGCATAATTTGTAAATAAGGACAAATAGATAAGCATCTGTTGAGTACAGATTCATATAATAAAATCTGTCAATAGCTTAAATGTACTCTCTCTTTCATAAAATGATTCTGTCTTCCCTTTCCAAGAGCCAAACAAAGTTATCTTTGAAAATTTTGATGTATTCTTTCATCACTTTAACATGGAAAAGGTTGCAACTTTTTTCTCTTTCGTAGTTTCAAAATGTCCCAAGTTCTACATTGAAAAGAAAGAACCATTCTATATTCGATATACCTCTGAAGATTGGTCAAATTGGCCATTCATTAGAGAAAAGAAACAAATAAATTGTGAAGGGGAGAGAATTGTGTTCTGATGTAATGTATGGCTGTGGCCTGCCTGATACTTGATAATGTTTTTATATTCGACATTGTTCACCTGTGGGTCATGCTTTGATCATGGTATTAATAGTGTACTATATATATCTACACTTACTTAGGCTATGACATAGTGATGCACTGCAACAAAGATCCAATGTTTCAATAATGGATGTTAAAATGTTTTAATTTACCGTATTACAGGTTCTGAAGCAATGTTTGCTGATCTTGGGCATTTTTCATATACTGCAA</genome_strand>
        <mrna_strand>GTGGTACTTTTGCGCTCTATTCCTTAATATGCAGGCATGCCAAAGTTAGCCTTCTGCCTAACAGGCAAGTTGCTGATGAAGCTCTTTCTACCTACAAACTTGAGCATCCTCCTGAGATGAAGAACAGCTCAAAGTTGAAGTTGCTTCTTGAGAAGCACAAGTCCTTACACACTGCTTTGCTGATTTTGGTGCTTCTTGGCACTTGTATGGTGATTGGAGATGGGCTGCTTACTCCAGCCATATCTG.................................................................................TATTCTCTGCGGTCTCTGGCCTTGAGTTATCGATGTCTCGGGAGCATCATCAAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCAGTGATTCCAATAACTTGCTTCATATTGGTCTGCCTATTCGCATTACAACATTATGGCACACATCGAGTTGGTTTTGTTTTTGCACCAATTGTGATGACCTGGTTACTCTGCATTAGTGCTCTTGGGTTATACAACATTATCCACTGGAATCCACAGGTTTATAAAGCTCTTTCCCCCTATTACATGGTAAAGTTCCTGAAGAAAACAAGAAAAGGTGGATGGATGTCTTTGGGTGGAATTCTGGTCTGCATAACTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCTGAAGCAATGTTTGCTGATCTTGGGCATTTCTCATATACTGCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0067G18-NJACb/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E577888" ref_strand="+" ref_description="SGN-E577888 [LE08BA01]">
      <seq>ctacatctcctaccatacaatgcttcaaatggagccatatcaatgcttgattgatagctattattgtatgaaaactccgctaagggtaggaagctatcccaatgaccaccaaactctatcacacacgcacgaagcatattctccaacacttgaatcgttcgctcagactgaccatcgggagaactagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0067G18-NJACb/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0067G18.1" temp_strand="+" temp_description="C06SLm0067G18.1  AC216664.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0067G18 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="36084" stop="36861"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36384" g_stop="36560" g_length="177"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="177" r_length="177" r_score="0.944"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0067G18.1" gen_strand="+" ref_id="SGN-E577888" ref_strand="+">
        <total_alignment_score>0.944</total_alignment_score>
        <cumulative_length_of_scored_exons>177</cumulative_length_of_scored_exons>
        <coverage percentage="0.941" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0067G18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E577888" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36384" e_stop="36560"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTACATCTCCTACCATACAAGGCTTCGAATGGAGCCATGTCAATGCTTAAGTGATAGCTATTATTGTATGAAAACTCCGCTAAGGGTAGAAAGCTATCCCAATGACCACCAAACTCTATCACACACGCACGAAGCATATCCTCCAACACTTGAATCGTCCTTTCAGACTGACCATCG</genome_strand>
        <mrna_strand>CTACATCTCCTACCATACAATGCTTCAAATGGAGCCATATCAATGCTTGATTGATAGCTATTATTGTATGAAAACTCCGCTAAGGGTAGGAAGCTATCCCAATGACCACCAAACTCTATCACACACGCACGAAGCATATTCTCCAACACTTGAATCGTTCGCTCAGACTGACCATCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0067G18-NJACb/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E379315" ref_strand="+" ref_description="SGN-E379315 [TUS-1-J2]">
      <seq>gaatcccttgacaaatcggcggtagtagctagctaacccaacaaagctccttatttctgacacattagtaggtcttacccaattcttcactgtctcaatcttagaaggatccaccatcactccatccttagaaaccacgttccccaagaaggacactacatctagccaaaactcacacttagagaacttggcataaaactttttctccctcaacatttccaataccattctcaaatgctcttcatgttcctccttacttttagagtatatcagtatatcatcaataaatacgatcacaaagagatccaaatatggcttaaaaatcccttttattaaactcataaacgcagcaggggcattcataagaccaaaagacatcactacaaatttgtaatgcccatacctggttctaaaagcagtctttggcacatccgttgcccgtattttcaattgatgataaccggatctcaagtcaatcttagaaaagacacaagcaccttgtaactgatcgaacaagtcattaatgcgaggaagaggatacttgttctttatggttaccttgttncactgccggtagcctatgcacatccgaaaactccaatccttcttctttacaaacaaaaccggagcaccccaaggagatgcagttggtctaatgaagcctttgctcacaactctttgaagtggtcttttaactctcttaactctgcgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0067G18-NJACb/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0067G18.1" temp_strand="+" temp_description="C06SLm0067G18.1  AC216664.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0067G18 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="37565" stop="38877"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="37865" g_stop="38577" g_length="713"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="712" r_length="712" r_score="0.926"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0067G18.1" gen_strand="+" ref_id="SGN-E379315" ref_strand="+">
        <total_alignment_score>0.926</total_alignment_score>
        <cumulative_length_of_scored_exons>713</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0067G18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E379315" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="37865" e_stop="38577"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAATCCCTTGACAAATCGGCGGTAGTAGCTAGCTAACCCAACAAAGCTCCTTATTTCTGACACATTAGTGGGTCTTACCCAATTCTTCACTGTCTCAATCTTAGAAGGATCCACCATCACTCCATCCTTAGAAACCACGTGCCCCAAGAAGGACACCGCATCTAGCCAAAACTCACACTTAGAGAACTTGGCATAAAGCTTTTTCTCCCTCAACATTTCCAATACCATTCTCAAATGCTCTTCATGTTCCTTCTTTATCTTTGAGTATACCAATATATCATCAATAAATACGATCACGAAGAGGTCCAAATATGGCTTAAAAATCCCGTTCATCAAGCTCATGAACGCAGCAGGGGCATTCGTAAAACCAAAGGACATCACTACAAATTCGTAATGCCCATACCTCGTTTGAAAAGCAGTCTTTGGTACATCCGTTGCCCGTATTTTCAATTGATGATAACCGGATCTCAAGTCAATCTTAGAGAAGACACAAGCACCTTGTAACTGATCGAACAAATCATCAATGCGGGGAAGAGGATACTTGTTCTTTATGGTTACCTTATTTAGTTGTCTGTAGTCTATACACATTCGAAAACTCCCATCCTTCTTCTTTACAAACAAAACCGTAGCACCCCAAGGAGATGCACTTGGTCTAATGAAGCCTTTGTTCAATAACTC-TTGAAGTTGTGCTTTTAACTCTCTTAACTCCACGG</genome_strand>
        <mrna_strand>GAATCCCTTGACAAATCGGCGGTAGTAGCTAGCTAACCCAACAAAGCTCCTTATTTCTGACACATTAGTAGGTCTTACCCAATTCTTCACTGTCTCAATCTTAGAAGGATCCACCATCACTCCATCCTTAGAAACCACGTTCCCCAAGAAGGACACTACATCTAGCCAAAACTCACACTTAGAGAACTTGGCATAAAACTTTTTCTCCCTCAACATTTCCAATACCATTCTCAAATGCTCTTCATGTTCCTCCTTACTTTTAGAGTATATCAGTATATCATCAATAAATACGATCACAAAGAGATCCAAATATGGCTTAAAAATCCCTTTTATTAAACTCATAAACGCAGCAGGGGCATTCATAAGACCAAAAGACATCACTACAAATTTGTAATGCCCATACCTGGTTCTAAAAGCAGTCTTTGGCACATCCGTTGCCCGTATTTTCAATTGATGATAACCGGATCTCAAGTCAATCTTAGAAAAGACACAAGCACCTTGTAACTGATCGAACAAGTCATTAATGCGAGGAAGAGGATACTTGTTCTTTATGGTTACCTTGTTNCACTGCCGGTAGCCTATGCACATCCGAAAACTCCAATCCTTCTTCTTTACAAACAAAACCGGAGCACCCCAAGGAGATGCAGTTGGTCTAATGAAGCCTTTGCTC-ACAACTCTTTGAAGTGGT-CTTTTAACTCTCTTAACTCTGCGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0067G18-NJACb/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E375319" ref_strand="+" ref_description="SGN-E375319 [TUS-15-F18]">
      <seq>gaatcccttgacaaatcggcggtagtagctagctaacccaacaaagctccttatttctgacacattagtaggtcttacccaattcttcactgtctcaatcttagaaggatccaccatcactccatccttagaaaccacgttccccaagaaggacactacatctagccaaaactcacacttagagaacttggcataaaactttttctccctcaacatttccaataccattctcaaatgctcttcatgttcctccttacttttagagtatatcagtatatcatcaataaatacgatcacaaagagatccaaatatggcttaaaaatcccttttattaaactcataaacgcagcaggggcattcataagaccaaaagacatcactacaaatttgtaatgcccatacctggttctaaaagcagtctttggcacatccgttgcccgtattttcaattgatgataaccggatctcaagtcaatcttagaaaagacacaagcaccttgtaactgatcgaacaagtcattaatgcgaggaagaggatacttgttctttatggttaccttgttcaactgccggtagcctatgcacatccgaaaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0067G18-NJACb/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0067G18.1" temp_strand="+" temp_description="C06SLm0067G18.1  AC216664.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0067G18 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="37565" stop="38760"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="37865" g_stop="38460" g_length="596"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="596" r_length="596" r_score="0.933"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0067G18.1" gen_strand="+" ref_id="SGN-E375319" ref_strand="+">
        <total_alignment_score>0.933</total_alignment_score>
        <cumulative_length_of_scored_exons>596</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0067G18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E375319" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="37865" e_stop="38460"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAATCCCTTGACAAATCGGCGGTAGTAGCTAGCTAACCCAACAAAGCTCCTTATTTCTGACACATTAGTGGGTCTTACCCAATTCTTCACTGTCTCAATCTTAGAAGGATCCACCATCACTCCATCCTTAGAAACCACGTGCCCCAAGAAGGACACCGCATCTAGCCAAAACTCACACTTAGAGAACTTGGCATAAAGCTTTTTCTCCCTCAACATTTCCAATACCATTCTCAAATGCTCTTCATGTTCCTTCTTTATCTTTGAGTATACCAATATATCATCAATAAATACGATCACGAAGAGGTCCAAATATGGCTTAAAAATCCCGTTCATCAAGCTCATGAACGCAGCAGGGGCATTCGTAAAACCAAAGGACATCACTACAAATTCGTAATGCCCATACCTCGTTTGAAAAGCAGTCTTTGGTACATCCGTTGCCCGTATTTTCAATTGATGATAACCGGATCTCAAGTCAATCTTAGAGAAGACACAAGCACCTTGTAACTGATCGAACAAATCATCAATGCGGGGAAGAGGATACTTGTTCTTTATGGTTACCTTATTTAGTTGTCTGTAGTCTATACACATTCGAAAAC</genome_strand>
        <mrna_strand>GAATCCCTTGACAAATCGGCGGTAGTAGCTAGCTAACCCAACAAAGCTCCTTATTTCTGACACATTAGTAGGTCTTACCCAATTCTTCACTGTCTCAATCTTAGAAGGATCCACCATCACTCCATCCTTAGAAACCACGTTCCCCAAGAAGGACACTACATCTAGCCAAAACTCACACTTAGAGAACTTGGCATAAAACTTTTTCTCCCTCAACATTTCCAATACCATTCTCAAATGCTCTTCATGTTCCTCCTTACTTTTAGAGTATATCAGTATATCATCAATAAATACGATCACAAAGAGATCCAAATATGGCTTAAAAATCCCTTTTATTAAACTCATAAACGCAGCAGGGGCATTCATAAGACCAAAAGACATCACTACAAATTTGTAATGCCCATACCTGGTTCTAAAAGCAGTCTTTGGCACATCCGTTGCCCGTATTTTCAATTGATGATAACCGGATCTCAAGTCAATCTTAGAAAAGACACAAGCACCTTGTAACTGATCGAACAAGTCATTAATGCGAGGAAGAGGATACTTGTTCTTTATGGTTACCTTGTTCAACTGCCGGTAGCCTATGCACATCCGAAAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0067G18-NJACb/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E204434" ref_strand="+" ref_description="SGN-E204434 [cLEC-13-J16]">
      <seq>gaatcccttgacaaatcggcggtagtagctagctaacccaacaaagctccttatttctgacacattagtaggtcttacccaattcttcactgtctcaatcttagaaggatccaccatcactccatccttagaaaccacgttccccaagaaggacactacatctagccaaaactcacacttagagaacttggcataaaactttttctccctcaacatttccaataccattctcaaatgctcttcatgttcctccttacttttagagtatatcagtatatcatcaataaatacgatcacaaagagatccaaatatggcttaaaaatcccttttattaaactcataaacgcagcaggggcattcataagaccaaaagacatcactacaaatttgtaatgcccatacctggttctaaaagcagtctttggcacatccgttgcccgtattttcaattgatgataaccggatctcaagtcaatcttagaaaagacacaagcaccttgtaactgatcgaacaagtcattaatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0067G18-NJACb/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0067G18.1" temp_strand="+" temp_description="C06SLm0067G18.1  AC216664.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0067G18 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="37565" stop="38690"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="37865" g_stop="38390" g_length="526"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="526" r_length="526" r_score="0.943"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0067G18.1" gen_strand="+" ref_id="SGN-E204434" ref_strand="+">
        <total_alignment_score>0.943</total_alignment_score>
        <cumulative_length_of_scored_exons>526</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0067G18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E204434" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="37865" e_stop="38390"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAATCCCTTGACAAATCGGCGGTAGTAGCTAGCTAACCCAACAAAGCTCCTTATTTCTGACACATTAGTGGGTCTTACCCAATTCTTCACTGTCTCAATCTTAGAAGGATCCACCATCACTCCATCCTTAGAAACCACGTGCCCCAAGAAGGACACCGCATCTAGCCAAAACTCACACTTAGAGAACTTGGCATAAAGCTTTTTCTCCCTCAACATTTCCAATACCATTCTCAAATGCTCTTCATGTTCCTTCTTTATCTTTGAGTATACCAATATATCATCAATAAATACGATCACGAAGAGGTCCAAATATGGCTTAAAAATCCCGTTCATCAAGCTCATGAACGCAGCAGGGGCATTCGTAAAACCAAAGGACATCACTACAAATTCGTAATGCCCATACCTCGTTTGAAAAGCAGTCTTTGGTACATCCGTTGCCCGTATTTTCAATTGATGATAACCGGATCTCAAGTCAATCTTAGAGAAGACACAAGCACCTTGTAACTGATCGAACAAATCATCAATG</genome_strand>
        <mrna_strand>GAATCCCTTGACAAATCGGCGGTAGTAGCTAGCTAACCCAACAAAGCTCCTTATTTCTGACACATTAGTAGGTCTTACCCAATTCTTCACTGTCTCAATCTTAGAAGGATCCACCATCACTCCATCCTTAGAAACCACGTTCCCCAAGAAGGACACTACATCTAGCCAAAACTCACACTTAGAGAACTTGGCATAAAACTTTTTCTCCCTCAACATTTCCAATACCATTCTCAAATGCTCTTCATGTTCCTCCTTACTTTTAGAGTATATCAGTATATCATCAATAAATACGATCACAAAGAGATCCAAATATGGCTTAAAAATCCCTTTTATTAAACTCATAAACGCAGCAGGGGCATTCATAAGACCAAAAGACATCACTACAAATTTGTAATGCCCATACCTGGTTCTAAAAGCAGTCTTTGGCACATCCGTTGCCCGTATTTTCAATTGATGATAACCGGATCTCAAGTCAATCTTAGAAAAGACACAAGCACCTTGTAACTGATCGAACAAGTCATTAATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0067G18-NJACb/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E368762" ref_strand="+" ref_description="SGN-E368762 [TUS-22-P2]">
      <seq>gtctcacccaattcttcactgtctcaatcttacaaggatccaccatcactccatccttagaaaccacgtgccccaagaaggacactgcatctatccaaaactcacacttagagaacttggcataaagctttttctccctcaacatttctaatacaattctcaaatgctcctcatgttccttcttactattagagtatatcagtatatcatcaataaacatgatgacaaagagatccaaatatggcttaaaatcccgttcatcaagctcatgaacgcagcaggggcattcgtaagaccaaaagacatcactacaaattcgtaatgcccatacctggttctaaaagcagtctttggcacatccgttgcccgtattttcaattgatgataaccggatctcaagtcaatcttagagaagacacaagcaccttgtaactgatcgaacaagtcatcaatgcgaggaagtggatacttgttcttaatagttaccttgttcaactgccggtagtctatgcacatccgaaaactcccatccttcttcttcacaaaccaaaccggagcaccccaaggagatgcacttggtctaatgaagactttgctcaaaaactcttgaagttgggcctttaactctcttaactccgcgggagccattctataagggggtatagaaatggggcgagtg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0067G18-NJACb/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0067G18.1" temp_strand="+" temp_description="C06SLm0067G18.1  AC216664.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0067G18 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="37636" stop="38914"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="37936" g_stop="38615" g_length="680"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="679" r_length="679" r_score="0.929"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0067G18.1" gen_strand="+" ref_id="SGN-E368762" ref_strand="+">
        <total_alignment_score>0.929</total_alignment_score>
        <cumulative_length_of_scored_exons>680</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0067G18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E368762" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="37936" e_stop="38615"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCTTACCCAATTCTTCACTGTCTCAATCTTAGAAGGATCCACCATCACTCCATCCTTAGAAACCACGTGCCCCAAGAAGGACACCGCATCTAGCCAAAACTCACACTTAGAGAACTTGGCATAAAGCTTTTTCTCCCTCAACATTTCCAATACCATTCTCAAATGCTCTTCATGTTCCTTCTTTATCTTTGAGTATACCAATATATCATCAATAAATACGATCACGAAGAGGTCCAAATATGGCTTAAAAATCCCGTTCATCAAGCTCATGAACGCAGCAGGGGCATTCGTAAAACCAAAGGACATCACTACAAATTCGTAATGCCCATACCTCGTTTGAAAAGCAGTCTTTGGTACATCCGTTGCCCGTATTTTCAATTGATGATAACCGGATCTCAAGTCAATCTTAGAGAAGACACAAGCACCTTGTAACTGATCGAACAAATCATCAATGCGGGGAAGAGGATACTTGTTCTTTATGGTTACCTTATTTAGTTGTCTGTAGTCTATACACATTCGAAAACTCCCATCCTTCTTCTTTACAAACAAAACCGTAGCACCCCAAGGAGATGCACTTGGTCTAATGAAGCCTTTGTTCAATAACTCTTGAAGTTGTGCTTTTAACTCTCTTAACTCCACGGGAGCCATTCTATAAGGGGGTATAGAAATGGGGCGAGTA</genome_strand>
        <mrna_strand>GTCTCACCCAATTCTTCACTGTCTCAATCTTACAAGGATCCACCATCACTCCATCCTTAGAAACCACGTGCCCCAAGAAGGACACTGCATCTATCCAAAACTCACACTTAGAGAACTTGGCATAAAGCTTTTTCTCCCTCAACATTTCTAATACAATTCTCAAATGCTCCTCATGTTCCTTCTTACTATTAGAGTATATCAGTATATCATCAATAAACATGATGACAAAGAGATCCAAATATGGCTT-AAAATCCCGTTCATCAAGCTCATGAACGCAGCAGGGGCATTCGTAAGACCAAAAGACATCACTACAAATTCGTAATGCCCATACCTGGTTCTAAAAGCAGTCTTTGGCACATCCGTTGCCCGTATTTTCAATTGATGATAACCGGATCTCAAGTCAATCTTAGAGAAGACACAAGCACCTTGTAACTGATCGAACAAGTCATCAATGCGAGGAAGTGGATACTTGTTCTTAATAGTTACCTTGTTCAACTGCCGGTAGTCTATGCACATCCGAAAACTCCCATCCTTCTTCTTCACAAACCAAACCGGAGCACCCCAAGGAGATGCACTTGGTCTAATGAAGACTTTGCTCAAAAACTCTTGAAGTTGGGCCTTTAACTCTCTTAACTCCGCGGGAGCCATTCTATAAGGGGGTATAGAAATGGGGCGAGTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0067G18-NJACb/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E240817" ref_strand="+" ref_description="SGN-E240817 [cLED-24-J5]">
      <seq>gtctcacccatttcttcactgtctcaatcttaccaggatccaccatcactccatccttagaaaccacgtgccccaagaaggacactgcatctatccaaaactcacacttagagaacttggcataaagctttttctccctcaacatttctaatacaattctcaaatgctcctcatgttccttcttactattagaggatatcagtatatcatcaatgaacatgatgacgcagagatccaaatatggcttaaaatcccgttcatcaagctcatgaacgcagcaggggcattcgtaagaccaaaagacatcactacaaattcgtaatgcccatacctggttctaaaagcagtctttggcaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0067G18-NJACb/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0067G18.1" temp_strand="+" temp_description="C06SLm0067G18.1  AC216664.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0067G18 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="37636" stop="38594"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="37936" g_stop="38294" g_length="359"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="358" r_length="358" r_score="0.919"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0067G18.1" gen_strand="+" ref_id="SGN-E240817" ref_strand="+">
        <total_alignment_score>0.919</total_alignment_score>
        <cumulative_length_of_scored_exons>359</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0067G18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E240817" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="37936" e_stop="38294"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCTTACCCAATTCTTCACTGTCTCAATCTTAGAAGGATCCACCATCACTCCATCCTTAGAAACCACGTGCCCCAAGAAGGACACCGCATCTAGCCAAAACTCACACTTAGAGAACTTGGCATAAAGCTTTTTCTCCCTCAACATTTCCAATACCATTCTCAAATGCTCTTCATGTTCCTTCTTTATCTTTGAGTATACCAATATATCATCAATAAATACGATCACGAAGAGGTCCAAATATGGCTTAAAAATCCCGTTCATCAAGCTCATGAACGCAGCAGGGGCATTCGTAAAACCAAAGGACATCACTACAAATTCGTAATGCCCATACCTCGTTTGAAAAGCAGTCTTTGGTACA</genome_strand>
        <mrna_strand>GTCTCACCCATTTCTTCACTGTCTCAATCTTACCAGGATCCACCATCACTCCATCCTTAGAAACCACGTGCCCCAAGAAGGACACTGCATCTATCCAAAACTCACACTTAGAGAACTTGGCATAAAGCTTTTTCTCCCTCAACATTTCTAATACAATTCTCAAATGCTCCTCATGTTCCTTCTTACTATTAGAGGATATCAGTATATCATCAATGAACATGATGACGCAGAGATCCAAATATGGCTT-AAAATCCCGTTCATCAAGCTCATGAACGCAGCAGGGGCATTCGTAAGACCAAAAGACATCACTACAAATTCGTAATGCCCATACCTGGTTCTAAAAGCAGTCTTTGGCACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0067G18-NJACb/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E355232" ref_strand="+" ref_description="SGN-E355232 [cTOS-18-A6]">
      <seq>tcaatgcgaggaagaggatacttgttcttaatagttaccttgttcagttgtctgtagtctatgcacattctaaaacttccatccttcttcttcacaaataaaactggagcaccccaaggagatgcacttggtctaatgaagaccttgctcaacaactcttgaagttgagcctttaactctcttaattcggcgggagccattctataagggggtatagaaatggggcgtgtgcctggttcaagatcgatacagaagtcaatatccctatctggtggcataccaggaagatctgcaggaaacacgtccaaaaactcgcggactaccgaaaccgactcaattgagggtacttgagtagtgtcatccttgagatgtgccaagaaagctgaacaccctttactaaccattttcttagcacgaagaaaggatatgatacgcaccagattggaagtgtagtcaccctcccacactaacggatctgtcccaggcttggctaacgtcaccgttttagcattacaatccaagatcgcaaaatttggagaaagccaagtcatacccagaattacatcaatgtcacccatttctaaaaaaccaaatctacataagtgttgctccccacgaaattcnacaaaacagaactatgtaccttttcaactaccac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0067G18-NJACb/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0067G18.1" temp_strand="+" temp_description="C06SLm0067G18.1  AC216664.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0067G18 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="38085" stop="39343"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="38385" g_stop="39043" g_length="659"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="658" r_length="658" r_score="0.903"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0067G18.1" gen_strand="+" ref_id="SGN-E355232" ref_strand="+">
        <total_alignment_score>0.903</total_alignment_score>
        <cumulative_length_of_scored_exons>659</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0067G18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E355232" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="38385" e_stop="39043"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAATGCGGGGAAGAGGATACTTGTTCTTTATGGTTACCTTATTTAGTTGTCTGTAGTCTATACACATTCGAAAACTCCCATCCTTCTTCTTTACAAACAAAACCGTAGCACCCCAAGGAGATGCACTTGGTCTAATGAAGCCTTTGTTCAATAACTCTTGAAGTTGTGCTTTTAACTCTCTTAACTCCACGGGAGCCATTCTATAAGGGGGTATAGAAATGGGGCGAGTACCAGATTCAAGATCAATACAGAAGTCAATATCCCTATCCGGTGGCATACCAGGAAGATCTGCAGGGAACACATCCAGAAACTCACGAACTACTGAAACCGACTCAATCGAAGGTACTTGGGTAGTGTCATCCTTGAGATGTGCCAAGAAAGCTAAACACCCTTTACTAATCATTTTCTTAGCACGAAGAAAGGAGACGATTCGGACCGGATTGGAAGTGTAGTCACCCTCCCACACTAACGGATTTGTCCCAGGCTTGGCTAACGTCACCGTTTTAGCATTACAATCCAAGATTGCAAATTGCGGAGAAAGCCAAGTCATACCCAGAATTACGTCAAAATCAACCATTTCTAAGGTAACCAAATCTACATAAGTGTTGCTCCCCACAAAGTTTACCAAACAAGACCTATATACCTTTTCAACTACCAC</genome_strand>
        <mrna_strand>TCAATGCGAGGAAGAGGATACTTGTTCTTAATAGTTACCTTGTTCAGTTGTCTGTAGTCTATGCACATTCTAAAACTTCCATCCTTCTTCTTCACAAATAAAACTGGAGCACCCCAAGGAGATGCACTTGGTCTAATGAAGACCTTGCTCAACAACTCTTGAAGTTGAGCCTTTAACTCTCTTAATTCGGCGGGAGCCATTCTATAAGGGGGTATAGAAATGGGGCGTGTGCCTGGTTCAAGATCGATACAGAAGTCAATATCCCTATCTGGTGGCATACCAGGAAGATCTGCAGGAAACACGTCCAAAAACTCGCGGACTACCGAAACCGACTCAATTGAGGGTACTTGAGTAGTGTCATCCTTGAGATGTGCCAAGAAAGCTGAACACCCTTTACTAACCATTTTCTTAGCACGAAGAAAGGATATGATACGCACCAGATTGGAAGTGTAGTCACCCTCCCACACTAACGGATCTGTCCCAGGCTTGGCTAACGTCACCGTTTTAGCATTACAATCCAAGATCGCAAAATTTGGAGAAAGCCAAGTCATACCCAGAATTACATCAATGTCACCCATTTCTAA-AAAACCAAATCTACATAAGTGTTGCTCCCCACGAAATTCNACAAAACAGAACTATGTACCTTTTCAACTACCAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0067G18-NJACb/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E353359" ref_strand="+" ref_description="SGN-E353359 [cTOS-15-G18]">
      <seq>tgtagtctatgcacattcaaaaactgccgatctttacaacaaaaccggagcaccccaaggagatgcacttggtctaatgaagcctttgttcaataactcttgaagttgtgcctttaactctcttaactctgcgggagccattctataagggggtataaaaatggggcgtgtgcccggttcgagatcaatacagaagtcaatatccctatccggtggcataccaggatgatctgcagggaacacatccataaactcacgaactactgaaactgagtcaatcgaaggtacttgggtagtgttatccttgagatgtgccaagaaagctaaacaccctttactaaccattttcttagcacgaagaaaggagatgatacgcaccggattggaagtgtagtcaccctcctacactaacagatctgtcccaggcttggctaacgtcacggttttagcattacaatccaagattgcaaaatttggagaaagccaagtcatacccagaattacatcgaagtcaaccatttcttgcaaggattttgccgtagccgctacctgtaacgctgaaatccgcaactctgacctcaaccctttcacaaaacgacgaatcctctcttgtggactgaaacaaagttgagtggcatatctggatagtgcacgaaacttagcctcatatgcattgacctacatcctaccttgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0067G18-NJACb/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0067G18.1" temp_strand="+" temp_description="C06SLm0067G18.1  AC216664.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0067G18 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="38173" stop="40180"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="38437" g_stop="38969" g_length="533"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="526" r_length="526" r_score="0.917"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="38970" i_stop="39713" i_length="744">
            <donor d_prob="0.950" d_score="0.88"/>
            <acceptor a_prob="0.000" a_score="0.86"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="39714" g_stop="39880" g_length="167"/>
          <reference_exon_boundary r_type="cDNA" r_start="527" r_stop="694" r_length="168" r_score="0.904"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0067G18.1" gen_strand="+" ref_id="SGN-E353359" ref_strand="+">
        <total_alignment_score>0.914</total_alignment_score>
        <cumulative_length_of_scored_exons>700</cumulative_length_of_scored_exons>
        <coverage percentage="1.009" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0067G18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E353359" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="38437" e_stop="38969"/>
          <exon e_start="39714" e_stop="39880"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTAGTCTATACACATTCGAAAACTCCCATCCTTCTTCTTTACAAACAAAACCGTAGCACCCCAAGGAGATGCACTTGGTCTAATGAAGCCTTTGTTCAATAACTCTTGAAGTTGTGCTTTTAACTCTCTTAACTCCACGGGAGCCATTCTATAAGGGGGTATAGAAATGGGGCGAGTACCAGATTCAAGATCAATACAGAAGTCAATATCCCTATCCGGTGGCATACCAGGAAGATCTGCAGGGAACACATCCAGAAACTCACGAACTACTGAAACCGACTCAATCGAAGGTACTTGGGTAGTGTCATCCTTGAGATGTGCCAAGAAAGCTAAACACCCTTTACTAATCATTTTCTTAGCACGAAGAAAGGAGACGATTCGGACCGGATTGGAAGTGTAGTCACCCTCCCACACTAACGGATTTGTCCCAGGCTTGGCTAACGTCACCGTTTTAGCATTACAATCCAAGATTGCAAATTGCGGAGAAAGCCAAGTCATACCCAGAATTACGTCAAAATCAACCATTTCTAAGGTAACCAAATCTACATAAGTGTTGCTCCCCACAAAGTTTACCAAACAAGACCTATATACCTTTTCAACTACCACAGACTCACCCACCGGAGTAGAGACACGAATAGGCATATCAAGTAATTCACAATGTAAATTTAGACCATTAGCAAATGAGGAAGATACATAAGAAAACGTGGATCCAGGATCAAACAATACAGAAGCCATGCAATCACAAACCAGAAGATTACCTGTGATGACAGCATCAGATGCCTCCGCTTCAGACCGCCCAGGGAAAGCGTAACAATGGGCCCTATCGTTCGTCTATCCGTTGCCCCTACCATGTTGTGATGTAGTGGCCCCAGTTTGCCCATTACCTCTGCCGTTTTGGTGACCGCTATTACCTCGACCACCACGCCCTCCAGAAAAACGACCTCTACCATGACCACCTCTACCTCTAGTTATTGGGGGTCTGTAACTTGGTCTGGGACAATTTCTCCTAATATGTCCAATCTCCCCACATCCATAACATTCTTTGGAGTCGATCATATGCCCCTCGGAGAAGTGTTGACCGGTCTGAGGTGGTCCCCCAACTACAGTCTGTAGTGAAGACTGAATTGGTCGGACTGAGTAACTTCCCGAACCTTGTCCTCTAGTGTAAGAACCATTAAACTCACCTACCTTTCGAATTCTTTTTGATGTCGATGTTGTGGTGAAGTCGTCTGGCTTCACTCCTTCCACTTCTATCACAAAGTCTACCACCTCTTGGAAGGATTTTGCCGTTGCCGCTATC-GTAAGGCCGAAATCCGCAATTCTGACCTCAACCCCTTCACAAACCGGCGAATCCGCTCTTGAGGACTGAAACAGAGTTGAGTGGCATATCTGGATAGTGCACGAAACTTAGCCTCATAAGCATTAACCGACATCCTACCTTGC</genome_strand>
        <mrna_strand>TGTAGTCTATGCACATTCAAAAACT-GC--CGATC-T-T-TACAA-CAAAACCGGAGCACCCCAAGGAGATGCACTTGGTCTAATGAAGCCTTTGTTCAATAACTCTTGAAGTTGTGCCTTTAACTCTCTTAACTCTGCGGGAGCCATTCTATAAGGGGGTATAAAAATGGGGCGTGTGCCCGGTTCGAGATCAATACAGAAGTCAATATCCCTATCCGGTGGCATACCAGGATGATCTGCAGGGAACACATCCATAAACTCACGAACTACTGAAACTGAGTCAATCGAAGGTACTTGGGTAGTGTTATCCTTGAGATGTGCCAAGAAAGCTAAACACCCTTTACTAACCATTTTCTTAGCACGAAGAAAGGAGATGATACGCACCGGATTGGAAGTGTAGTCACCCTCCTACACTAACAGATCTGTCCCAGGCTTGGCTAACGTCACGGTTTTAGCATTACAATCCAAGATTGCAAAATTTGGAGAAAGCCAAGTCATACCCAGAATTACATCGAAGTCAACCATTTCTTGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGGATTTTGCCGTAGCCGCTACCTGTAACGCTGAAATCCGCAACTCTGACCTCAACCCTTTCACAAAACGACGAATCCTCTCTTGTGGACTGAAACAAAGTTGAGTGGCATATCTGGATAGTGCACGAAACTTAGCCTCATATGCATTGACCTACATCCTACCTTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0067G18-NJACb/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E355244" ref_strand="+" ref_description="SGN-E355244 [cTOS-18-K20]">
      <seq>cggaaactcccatccttcttcttcacaaacaaaatcggagcaccccaaggagatgcacttggtctaatgaaacctttgctcaacaactcttgaagttgggcctttaactctcttaactctacgggagccattctataagggggtatagaaatggggcgtgtgcccggttcaagatcgatacagaagtcaatatccctatctggtggcataccaggaagatctgcagggaacacatccaaaaactcacagactataaaaaccgactcaatcgaaggtacttgggtagtgtcatccttgagatgtgccaagaaagctaaacaccctttactaaccattttcttagcacgaagaaaggagatgatgcacaccggattggaagtgtagtcaccctcccacactaacggatctgtcccaggcttggctaatgtcaccgttttagcattacaatccaagatcgcaaattgcggagaaagccaagtcatacccagaattacatcaaaatcaaccatttctaagataaccaaatctacataagtgttgctccccacaaagttcaccaaacaagacctatataccttttcaactaccacagactcacccaccggagtagaaacacgaataggcatatcaagtaattcacaatgtaaatttagaccgttagcaaatgaggaagatacantagaaaacgtggatcccaggatcaacaatacagaagccatgcaatcacaatcgaaagattacctgtgatgacagcatctaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0067G18-NJACb/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0067G18.1" temp_strand="+" temp_description="C06SLm0067G18.1  AC216664.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0067G18 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="38154" stop="39515"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="38454" g_stop="39215" g_length="762"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="761" r_length="761" r_score="0.941"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0067G18.1" gen_strand="+" ref_id="SGN-E355244" ref_strand="+">
        <total_alignment_score>0.941</total_alignment_score>
        <cumulative_length_of_scored_exons>762</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0067G18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E355244" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="38454" e_stop="39215"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGAAAACTCCCATCCTTCTTCTTTACAAACAAAACCGTAGCACCCCAAGGAGATGCACTTGGTCTAATGAAGCCTTTGTTCAATAACTCTTGAAGTTGTGCTTTTAACTCTCTTAACTCCACGGGAGCCATTCTATAAGGGGGTATAGAAATGGGGCGAGTACCAGATTCAAGATCAATACAGAAGTCAATATCCCTATCCGGTGGCATACCAGGAAGATCTGCAGGGAACACATCCAGAAACTCACGAACTACTGAAACCGACTCAATCGAAGGTACTTGGGTAGTGTCATCCTTGAGATGTGCCAAGAAAGCTAAACACCCTTTACTAATCATTTTCTTAGCACGAAGAAAGGAGACGATTCGGACCGGATTGGAAGTGTAGTCACCCTCCCACACTAACGGATTTGTCCCAGGCTTGGCTAACGTCACCGTTTTAGCATTACAATCCAAGATTGCAAATTGCGGAGAAAGCCAAGTCATACCCAGAATTACGTCAAAATCAACCATTTCTAAGGTAACCAAATCTACATAAGTGTTGCTCCCCACAAAGTTTACCAAACAAGACCTATATACCTTTTCAACTACCACAGACTCACCCACCGGAGTAGAGACACGAATAGGCATATCAAGTAATTCACAATGTAAATTTAGACCATTAGCAAATGAGGAAGATACATAAGAAAACGTGGAT-CCAGGATCAAACAATACAGAAGCCATGCAATCACAAACCAGAAGATTACCTGTGATGACAGCATCAGAT</genome_strand>
        <mrna_strand>CGGAAACTCCCATCCTTCTTCTTCACAAACAAAATCGGAGCACCCCAAGGAGATGCACTTGGTCTAATGAAACCTTTGCTCAACAACTCTTGAAGTTGGGCCTTTAACTCTCTTAACTCTACGGGAGCCATTCTATAAGGGGGTATAGAAATGGGGCGTGTGCCCGGTTCAAGATCGATACAGAAGTCAATATCCCTATCTGGTGGCATACCAGGAAGATCTGCAGGGAACACATCCAAAAACTCACAGACTATAAAAACCGACTCAATCGAAGGTACTTGGGTAGTGTCATCCTTGAGATGTGCCAAGAAAGCTAAACACCCTTTACTAACCATTTTCTTAGCACGAAGAAAGGAGATGATGCACACCGGATTGGAAGTGTAGTCACCCTCCCACACTAACGGATCTGTCCCAGGCTTGGCTAATGTCACCGTTTTAGCATTACAATCCAAGATCGCAAATTGCGGAGAAAGCCAAGTCATACCCAGAATTACATCAAAATCAACCATTTCTAAGATAACCAAATCTACATAAGTGTTGCTCCCCACAAAGTTCACCAAACAAGACCTATATACCTTTTCAACTACCACAGACTCACCCACCGGAGTAGAAACACGAATAGGCATATCAAGTAATTCACAATGTAAATTTAGACCGTTAGCAAATGAGGAAGATACANTAGAAAACGTGGATCCCAGGATC-AACAATACAGAAGCCATGCAATCACAATCGA-AAGATTACCTGTGATGACAGCATCTAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0067G18-NJACb/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E351414" ref_strand="+" ref_description="SGN-E351414 [cTOS-12-D7]">
      <seq>cggaaactcccatccttcttcttcacaaacaaaatcggagcaccccaaggagatgcacttggtctaatgaaacctttgctcaacaactcttgaagttgggcctttaactctcttaactctacgggagccattctataagggggtatagaaatggggcgtgtgcccggttcaagatcgatacagaagtcaatatccctatctggtggcataccaggaagatctgcagggaacacatccaaaaactcacagactataaaaaccgactcaatcgaaggtacttgggtagtgtcatccttgagatgtgccaagaaagctaaacaccctttactaaccattttcttagcacgaagaaaggagatgatgcacaccggattggaagtgtagtcaccctcccacactaacggatctgtcccaggcttggctaatgtcaccgttttagcattacaatccaagatcgcaaattgcggagaaagccaagtcatacccagaattacatcaaaatcaaccatttctaagataaccaaatctacataagtgttgctccccacaaagttcaccaaacaagacctatataccttttcaactaccacagactcacccaccggagtagaaacacgaataggcatatcaagtaattcacaatgtaaatttagaccgttag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0067G18-NJACb/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0067G18.1" temp_strand="+" temp_description="C06SLm0067G18.1  AC216664.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0067G18 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="38154" stop="39414"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="38454" g_stop="39114" g_length="661"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="661" r_length="661" r_score="0.947"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0067G18.1" gen_strand="+" ref_id="SGN-E351414" ref_strand="+">
        <total_alignment_score>0.947</total_alignment_score>
        <cumulative_length_of_scored_exons>661</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0067G18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E351414" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="38454" e_stop="39114"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGAAAACTCCCATCCTTCTTCTTTACAAACAAAACCGTAGCACCCCAAGGAGATGCACTTGGTCTAATGAAGCCTTTGTTCAATAACTCTTGAAGTTGTGCTTTTAACTCTCTTAACTCCACGGGAGCCATTCTATAAGGGGGTATAGAAATGGGGCGAGTACCAGATTCAAGATCAATACAGAAGTCAATATCCCTATCCGGTGGCATACCAGGAAGATCTGCAGGGAACACATCCAGAAACTCACGAACTACTGAAACCGACTCAATCGAAGGTACTTGGGTAGTGTCATCCTTGAGATGTGCCAAGAAAGCTAAACACCCTTTACTAATCATTTTCTTAGCACGAAGAAAGGAGACGATTCGGACCGGATTGGAAGTGTAGTCACCCTCCCACACTAACGGATTTGTCCCAGGCTTGGCTAACGTCACCGTTTTAGCATTACAATCCAAGATTGCAAATTGCGGAGAAAGCCAAGTCATACCCAGAATTACGTCAAAATCAACCATTTCTAAGGTAACCAAATCTACATAAGTGTTGCTCCCCACAAAGTTTACCAAACAAGACCTATATACCTTTTCAACTACCACAGACTCACCCACCGGAGTAGAGACACGAATAGGCATATCAAGTAATTCACAATGTAAATTTAGACCATTAG</genome_strand>
        <mrna_strand>CGGAAACTCCCATCCTTCTTCTTCACAAACAAAATCGGAGCACCCCAAGGAGATGCACTTGGTCTAATGAAACCTTTGCTCAACAACTCTTGAAGTTGGGCCTTTAACTCTCTTAACTCTACGGGAGCCATTCTATAAGGGGGTATAGAAATGGGGCGTGTGCCCGGTTCAAGATCGATACAGAAGTCAATATCCCTATCTGGTGGCATACCAGGAAGATCTGCAGGGAACACATCCAAAAACTCACAGACTATAAAAACCGACTCAATCGAAGGTACTTGGGTAGTGTCATCCTTGAGATGTGCCAAGAAAGCTAAACACCCTTTACTAACCATTTTCTTAGCACGAAGAAAGGAGATGATGCACACCGGATTGGAAGTGTAGTCACCCTCCCACACTAACGGATCTGTCCCAGGCTTGGCTAATGTCACCGTTTTAGCATTACAATCCAAGATCGCAAATTGCGGAGAAAGCCAAGTCATACCCAGAATTACATCAAAATCAACCATTTCTAAGATAACCAAATCTACATAAGTGTTGCTCCCCACAAAGTTCACCAAACAAGACCTATATACCTTTTCAACTACCACAGACTCACCCACCGGAGTAGAAACACGAATAGGCATATCAAGTAATTCACAATGTAAATTTAGACCGTTAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0067G18-NJACb/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E352716" ref_strand="+" ref_description="SGN-E352716 [cTOS-11-H19]">
      <seq>gatctgtcccaggcttggctaacgtcacagttttagcattacaatccaagattgcaaaatttggagaaagccaagtcatacccagaattacatcaaaatcaaccatttctaagataaccaagtctacataagtattgctccccacaaaagtcaccagaccagacctatatactttttcaactatcacagactcacccaccggagtagaaacacgaataggcatgtcaagcaattcataatttaatttaagaccagtagcaaatgaggaagatacatatgaaaatgtggatccagggtcaaataatacaaaagccatgcaatcacaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0067G18-NJACb/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0067G18.1" temp_strand="+" temp_description="C06SLm0067G18.1  AC216664.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0067G18 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="38557" stop="39483"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="38857" g_stop="39187" g_length="331"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="331" r_length="331" r_score="0.903"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0067G18.1" gen_strand="+" ref_id="SGN-E352716" ref_strand="+">
        <total_alignment_score>0.903</total_alignment_score>
        <cumulative_length_of_scored_exons>331</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0067G18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E352716" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="38857" e_stop="39187"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATTTGTCCCAGGCTTGGCTAACGTCACCGTTTTAGCATTACAATCCAAGATTGCAAATTGCGGAGAAAGCCAAGTCATACCCAGAATTACGTCAAAATCAACCATTTCTAAGGTAACCAAATCTACATAAGTGTTGCTCCCCACAAAGTTTACCAAACAAGACCTATATACCTTTTCAACTACCACAGACTCACCCACCGGAGTAGAGACACGAATAGGCATATCAAGTAATTCACAATGTAAATTTAGACCATTAGCAAATGAGGAAGATACATAAGAAAACGTGGATCCAGGATCAAACAATACAGAAGCCATGCAATCACAAACCAG</genome_strand>
        <mrna_strand>GATCTGTCCCAGGCTTGGCTAACGTCACAGTTTTAGCATTACAATCCAAGATTGCAAAATTTGGAGAAAGCCAAGTCATACCCAGAATTACATCAAAATCAACCATTTCTAAGATAACCAAGTCTACATAAGTATTGCTCCCCACAAAAGTCACCAGACCAGACCTATATACTTTTTCAACTATCACAGACTCACCCACCGGAGTAGAAACACGAATAGGCATGTCAAGCAATTCATAATTTAATTTAAGACCAGTAGCAAATGAGGAAGATACATATGAAAATGTGGATCCAGGGTCAAATAATACAAAAGCCATGCAATCACAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0067G18-NJACb/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E244046" ref_strand="+" ref_description="SGN-E244046 [cLEE-1-H7]">
      <seq>aaacacgaataggcatatcaagtaattcacaatgtaaagttagaccattagcaaatgaggaagatacataagaaaatgtggatccaggatcaaacaatacagaagccatgcaatcacaaaccaaaagattacctgtgatgacaacatcagattcctccgcttcagaccgcccagggaaagcgtaacaatgggccctatcattcttatgtctgttgcccctaccatgttgtgatgtagtggctccagtttgcccatcacctcggccgttttggtgaccaccatttcctcgaccgccacgtcctccagaataacggactctgccatgaccacctctacctctaacctttggaggtctgtaactctgttttggacaatatctcttaatatgtccaatctccccacacccatagcactctctgggttcatgcataagtctctcagagaagtgttgaccggtcgaaggtggacccccaactacagtctgtagtgaagactgaattggtcggactgagtaacttcccgaaccctgtcctctagtgtaagcaccattaaactcacc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0067G18-NJACb/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0067G18.1" temp_strand="+" temp_description="C06SLm0067G18.1  AC216664.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0067G18 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="38764" stop="39922"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="39064" g_stop="39622" g_length="559"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="559" r_length="559" r_score="0.907"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0067G18.1" gen_strand="+" ref_id="SGN-E244046" ref_strand="+">
        <total_alignment_score>0.907</total_alignment_score>
        <cumulative_length_of_scored_exons>559</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0067G18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E244046" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="39064" e_stop="39622"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGACACGAATAGGCATATCAAGTAATTCACAATGTAAATTTAGACCATTAGCAAATGAGGAAGATACATAAGAAAACGTGGATCCAGGATCAAACAATACAGAAGCCATGCAATCACAAACCAGAAGATTACCTGTGATGACAGCATCAGATGCCTCCGCTTCAGACCGCCCAGGGAAAGCGTAACAATGGGCCCTATCGTTCGTCTATCCGTTGCCCCTACCATGTTGTGATGTAGTGGCCCCAGTTTGCCCATTACCTCTGCCGTTTTGGTGACCGCTATTACCTCGACCACCACGCCCTCCAGAAAAACGACCTCTACCATGACCACCTCTACCTCTAGTTATTGGGGGTCTGTAACTTGGTCTGGGACAATTTCTCCTAATATGTCCAATCTCCCCACATCCATAACATTCTTTGGAGTCGATCATATGCCCCTCGGAGAAGTGTTGACCGGTCTGAGGTGGTCCCCCAACTACAGTCTGTAGTGAAGACTGAATTGGTCGGACTGAGTAACTTCCCGAACCTTGTCCTCTAGTGTAAGAACCATTAAACTCACC</genome_strand>
        <mrna_strand>AAACACGAATAGGCATATCAAGTAATTCACAATGTAAAGTTAGACCATTAGCAAATGAGGAAGATACATAAGAAAATGTGGATCCAGGATCAAACAATACAGAAGCCATGCAATCACAAACCAAAAGATTACCTGTGATGACAACATCAGATTCCTCCGCTTCAGACCGCCCAGGGAAAGCGTAACAATGGGCCCTATCATTCTTATGTCTGTTGCCCCTACCATGTTGTGATGTAGTGGCTCCAGTTTGCCCATCACCTCGGCCGTTTTGGTGACCACCATTTCCTCGACCGCCACGTCCTCCAGAATAACGGACTCTGCCATGACCACCTCTACCTCTAACCTTTGGAGGTCTGTAACTCTGTTTTGGACAATATCTCTTAATATGTCCAATCTCCCCACACCCATAGCACTCTCTGGGTTCATGCATAAGTCTCTCAGAGAAGTGTTGACCGGTCGAAGGTGGACCCCCAACTACAGTCTGTAGTGAAGACTGAATTGGTCGGACTGAGTAACTTCCCGAACCCTGTCCTCTAGTGTAAGCACCATTAAACTCACC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0067G18-NJACb/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E214046" ref_strand="+" ref_description="SGN-E214046 [cLEC-80-E17]">
      <seq>acgaataggcatatcaagaaattcacaatgtaaatttagaccattagcaaatgaggaagatacataagaaaacgtggatccaggatcaaacaatacggaagccatgcaatcacaaacaagaagattacctgtgatgacagcatcagatgcctccgctttagaccgcccagggaaagcgtaacaatgggccctatagtttgtttgtccattgcccctaccatgtcgtgatgtagtggccccagtttgtccattacctctgccgttttggtgaccaccattgcctcgaccaccacgtcctccaaaataacggcctctaccatgacaacctctacctctaactattgggggtctataacttggtccgggaaaatttctcctaatatgtccaatctccccacatccataacattctctagagtcactcataggcccctcggagaagtgttgaccggtctgaggtggacccccaactacagtttgtagtgaagactgaatgggtcgaactgagtaacctccagaaccttgtcctctagagtaagaacccttaaactcatctcccctttgaaacctcatcgatgtcgatgtcgtggtgaagtcgtctggtttcactccttccacttctatcaaaaagtctaccacttcttggaaggattttgccgttgccgctacctgtaagggcgaaatccgcaattctgacctcaaccccttcacaaccggcgaatccgctcttgagggactgaacagagttgagtggcatatctgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0067G18-NJACb/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0067G18.1" temp_strand="+" temp_description="C06SLm0067G18.1  AC216664.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0067G18 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="38768" stop="40130"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="39068" g_stop="39830" g_length="763"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="763" r_length="763" r_score="0.924"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0067G18.1" gen_strand="+" ref_id="SGN-E214046" ref_strand="+">
        <total_alignment_score>0.924</total_alignment_score>
        <cumulative_length_of_scored_exons>763</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0067G18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E214046" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="39068" e_stop="39830"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACGAATAGGCATATCAAGTAATTCACAATGTAAATTTAGACCATTAGCAAATGAGGAAGATACATAAGAAAACGTGGATCCAGGATCAAACAATACAGAAGCCATGCAATCACAAACCAGAAGATTACCTGTGATGACAGCATCAGATGCCTCCGCTTCAGACCGCCCAGGGAAAGCGTAACAATGGGCCCTATCGTTCGTCTATCCGTTGCCCCTACCATGTTGTGATGTAGTGGCCCCAGTTTGCCCATTACCTCTGCCGTTTTGGTGACCGCTATTACCTCGACCACCACGCCCTCCAGAAAAACGACCTCTACCATGACCACCTCTACCTCTAGTTATTGGGGGTCTGTAACTTGGTCTGGGACAATTTCTCCTAATATGTCCAATCTCCCCACATCCATAACATTCTTTGGAGTCGATCATATGCCCCTCGGAGAAGTGTTGACCGGTCTGAGGTGGTCCCCCAACTACAGTCTGTAGTGAAGACTGAATTGGTCGGACTGAGTAACTTCCCGAACCTTGTCCTCTAGTGTAAGAACCATTAAACTCACCTACCTTTCGAATTCTTTTTGATGTCGATGTTGTGGTGAAGTCGTCTGGCTTCACTCCTTCCACTTCTATCACAAAGTCTACCACCTCTTGGAAGGATTTTGCCGTTGCCGCTATC-GTAAGGCCGAAATCCGCAATTCTGACCTCAACCCCTTCACAAACCGGCGAATCCGCTCTTGA-GGACTGAAACAGAGTTGAGTGGCATATCTGG</genome_strand>
        <mrna_strand>ACGAATAGGCATATCAAGAAATTCACAATGTAAATTTAGACCATTAGCAAATGAGGAAGATACATAAGAAAACGTGGATCCAGGATCAAACAATACGGAAGCCATGCAATCACAAACAAGAAGATTACCTGTGATGACAGCATCAGATGCCTCCGCTTTAGACCGCCCAGGGAAAGCGTAACAATGGGCCCTATAGTTTGTTTGTCCATTGCCCCTACCATGTCGTGATGTAGTGGCCCCAGTTTGTCCATTACCTCTGCCGTTTTGGTGACCACCATTGCCTCGACCACCACGTCCTCCAAAATAACGGCCTCTACCATGACAACCTCTACCTCTAACTATTGGGGGTCTATAACTTGGTCCGGGAAAATTTCTCCTAATATGTCCAATCTCCCCACATCCATAACATTCTCTAGAGTCACTCATAGGCCCCTCGGAGAAGTGTTGACCGGTCTGAGGTGGACCCCCAACTACAGTTTGTAGTGAAGACTGAATGGGTCGAACTGAGTAACCTCCAGAACCTTGTCCTCTAGAGTAAGAACCCTTAAACTCATCTCCCCTTTGAAACCTCATCGATGTCGATGTCGTGGTGAAGTCGTCTGGTTTCACTCCTTCCACTTCTATCAAAAAGTCTACCACTTCTTGGAAGGATTTTGCCGTTGCCGCTACCTGTAAGGGCGAAATCCGCAATTCTGACCTCAACCCCTTCAC-AACCGGCGAATCCGCTCTTGAGGGACTG-AACAGAGTTGAGTGGCATATCTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0067G18-NJACb/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E356912" ref_strand="+" ref_description="SGN-E356912 [cTOS-22-F17]">
      <seq>caggatcaaacaatacggaagccatgcaatcacaaactagaagattacctgtgatgacagcatcagatgcctccgcttcagaccgcccagggaaagcgtaacaatgggccctatcgtttgtctgcccattgcccctaccatgttgtgatgtagtggccccagtttgcccattacctctgccgttttggtgaccaccattacctcgaccaccacgtcctccagaataacggcctctaccatgaccacctctacctctagctattgggggtctataacttggtccaggacaatttatcctaatatgtccaatctccccacatccataacattctctggagtcactcataggccccttggagaagtgttgaccggtctgaggtggacccccaactacagtctgtagtgaagactgaatgggtcgagccgagtaacctccggaaccttgtcctctagagtaagaacccttaaactcacctccctttcgaaacctctttgatgttgatgtcgtggtgaagtcgtctggcttcactccttccacttctatcacaaagtctaccacttcttggaaggattttgccgttgccgctacctgtaaggccgaaatccgcaattctgacctcaaccccttcacaaaccggagaatccgctcttgaggactgaaacagagttgagtggcatatccggatagtgcacggaacttagcctcataagcattaaccgacatcctaccttgctctaggctcaggaactcatctcttttcctatccctcaaagtccgggggatatactt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0067G18-NJACb/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0067G18.1" temp_strand="+" temp_description="C06SLm0067G18.1  AC216664.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0067G18 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="38848" stop="40236"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="39148" g_stop="39936" g_length="789"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="790" r_length="790" r_score="0.940"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0067G18.1" gen_strand="+" ref_id="SGN-E356912" ref_strand="+">
        <total_alignment_score>0.940</total_alignment_score>
        <cumulative_length_of_scored_exons>789</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0067G18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E356912" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="39148" e_stop="39936"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGGATCAAACAATACAGAAGCCATGCAATCACAAACCAGAAGATTACCTGTGATGACAGCATCAGATGCCTCCGCTTCAGACCGCCCAGGGAAAGCGTAACAATGGGCCCTATCGTTCGTCTATCCGTTGCCCCTACCATGTTGTGATGTAGTGGCCCCAGTTTGCCCATTACCTCTGCCGTTTTGGTGACCGCTATTACCTCGACCACCACGCCCTCCAGAAAAACGACCTCTACCATGACCACCTCTACCTCTAGTTATTGGGGGTCTGTAACTTGGTCTGGGACAATTTCTCCTAATATGTCCAATCTCCCCACATCCATAACATTCTTTGGAGTCGATCATATGCCCCTCGGAGAAGTGTTGACCGGTCTGAGGTGGTCCCCCAACTACAGTCTGTAGTGAAGACTGAATTGGTCGGACTGAGTAACTTCCCGAACCTTGTCCTCTAGTGTAAGAACCATTAAACTCACCTACCTTTCGAATTCTTTTTGATGTCGATGTTGTGGTGAAGTCGTCTGGCTTCACTCCTTCCACTTCTATCACAAAGTCTACCACCTCTTGGAAGGATTTTGCCGTTGCCGCTATC-GTAAGGCCGAAATCCGCAATTCTGACCTCAACCCCTTCACAAACCGGCGAATCCGCTCTTGAGGACTGAAACAGAGTTGAGTGGCATATCTGGATAGTGCACGAAACTTAGCCTCATAAGCATTAACCGACATCCTACCTTGCTCTAGGTTCAAGAACTCATCCCTTTTCCTATCCCTCAAAGTCCGGGGGATATAATT</genome_strand>
        <mrna_strand>CAGGATCAAACAATACGGAAGCCATGCAATCACAAACTAGAAGATTACCTGTGATGACAGCATCAGATGCCTCCGCTTCAGACCGCCCAGGGAAAGCGTAACAATGGGCCCTATCGTTTGTCTGCCCATTGCCCCTACCATGTTGTGATGTAGTGGCCCCAGTTTGCCCATTACCTCTGCCGTTTTGGTGACCACCATTACCTCGACCACCACGTCCTCCAGAATAACGGCCTCTACCATGACCACCTCTACCTCTAGCTATTGGGGGTCTATAACTTGGTCCAGGACAATTTATCCTAATATGTCCAATCTCCCCACATCCATAACATTCTCTGGAGTCACTCATAGGCCCCTTGGAGAAGTGTTGACCGGTCTGAGGTGGACCCCCAACTACAGTCTGTAGTGAAGACTGAATGGGTCGAGCCGAGTAACCTCCGGAACCTTGTCCTCTAGAGTAAGAACCCTTAAACTCACCTCCCTTTCGAAACCTCTTTGATGTTGATGTCGTGGTGAAGTCGTCTGGCTTCACTCCTTCCACTTCTATCACAAAGTCTACCACTTCTTGGAAGGATTTTGCCGTTGCCGCTACCTGTAAGGCCGAAATCCGCAATTCTGACCTCAACCCCTTCACAAACCGGAGAATCCGCTCTTGAGGACTGAAACAGAGTTGAGTGGCATATCCGGATAGTGCACGGAACTTAGCCTCATAAGCATTAACCGACATCCTACCTTGCTCTAGGCTCAGGAACTCATCTCTTTTCCTATCCCTCAAAGTCCGGGGGATATACTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0067G18-NJACb/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E353805" ref_strand="+" ref_description="SGN-E353805 [cTOS-10-C24]">
      <seq>ggatcaacaatacggaagccatgcaatcacaaactagaagattacctgtgatgacagcatcagatgcctccgcttcagaccgcccagggaaagcgtaacaatgggccctatcgtttgtctgcccattgcccctaccatgttgtgatgtagtggccccagtttgcccattacctctgccgttttggtgaccaccattacctcgaccaccacgtcctccagaataacggcctctaccatgaccacctctacctctagctattgggggtctataacttggtccaggacaatttatcctaatatgtccaatctccccacatccataacattctctggagtcactcataggccccttggagaagtgttgaccggtctgaggtggacccccaactacagtctgtagtgaagactgaatgggtcgagccgagtaacctccggaaccttgtcctctaaagtaagaacccttaaactcacctccctttcgaaacctctttgatgttgatgtcgtggtgaagtcgtctggcttcactccttcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0067G18-NJACb/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0067G18.1" temp_strand="+" temp_description="C06SLm0067G18.1  AC216664.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0067G18 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="38850" stop="39983"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="39150" g_stop="39683" g_length="534"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="533" r_length="533" r_score="0.929"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0067G18.1" gen_strand="+" ref_id="SGN-E353805" ref_strand="+">
        <total_alignment_score>0.929</total_alignment_score>
        <cumulative_length_of_scored_exons>534</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0067G18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E353805" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="39150" e_stop="39683"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGATCAAACAATACAGAAGCCATGCAATCACAAACCAGAAGATTACCTGTGATGACAGCATCAGATGCCTCCGCTTCAGACCGCCCAGGGAAAGCGTAACAATGGGCCCTATCGTTCGTCTATCCGTTGCCCCTACCATGTTGTGATGTAGTGGCCCCAGTTTGCCCATTACCTCTGCCGTTTTGGTGACCGCTATTACCTCGACCACCACGCCCTCCAGAAAAACGACCTCTACCATGACCACCTCTACCTCTAGTTATTGGGGGTCTGTAACTTGGTCTGGGACAATTTCTCCTAATATGTCCAATCTCCCCACATCCATAACATTCTTTGGAGTCGATCATATGCCCCTCGGAGAAGTGTTGACCGGTCTGAGGTGGTCCCCCAACTACAGTCTGTAGTGAAGACTGAATTGGTCGGACTGAGTAACTTCCCGAACCTTGTCCTCTAGTGTAAGAACCATTAAACTCACCTACCTTTCGAATTCTTTTTGATGTCGATGTTGTGGTGAAGTCGTCTGGCTTCACTCCTTCC</genome_strand>
        <mrna_strand>GGATC-AACAATACGGAAGCCATGCAATCACAAACTAGAAGATTACCTGTGATGACAGCATCAGATGCCTCCGCTTCAGACCGCCCAGGGAAAGCGTAACAATGGGCCCTATCGTTTGTCTGCCCATTGCCCCTACCATGTTGTGATGTAGTGGCCCCAGTTTGCCCATTACCTCTGCCGTTTTGGTGACCACCATTACCTCGACCACCACGTCCTCCAGAATAACGGCCTCTACCATGACCACCTCTACCTCTAGCTATTGGGGGTCTATAACTTGGTCCAGGACAATTTATCCTAATATGTCCAATCTCCCCACATCCATAACATTCTCTGGAGTCACTCATAGGCCCCTTGGAGAAGTGTTGACCGGTCTGAGGTGGACCCCCAACTACAGTCTGTAGTGAAGACTGAATGGGTCGAGCCGAGTAACCTCCGGAACCTTGTCCTCTAAAGTAAGAACCCTTAAACTCACCTCCCTTTCGAAACCTCTTTGATGTTGATGTCGTGGTGAAGTCGTCTGGCTTCACTCCTTCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0067G18-NJACb/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E356209" ref_strand="+" ref_description="SGN-E356209 [cTOS-20-H15]">
      <seq>ttcagaccgcccagggaaagcgtaacaatgggccctatcgttcgtctgtccgttgcccctaccatgttgtgatgtagtggccccagtttgcccattacctctgccattttggtgaccaccattacctcgaccaccacgtcctccagaataacggcctctaccatgaccacctctacctctagctattgggggtctataactttgtctgggacaatttttcctaatatgtccaatctccccacatccataacattctctggagtcaagcataggcccctcggagaagtgttaaccggtctgaggtggtctcccaactacagtctgtagtgaagactgaattggtcggactgagtaacttcccgaaccctgtcctctagtgtaagaaccattaaactcacctcccttccgaaacctttttgatgtcgatgttgtggtgaagtcgtctggcttcactccttccacttctatcacaaagtctaccacttcttggaaggattttgccgttgccgctatctgtaaggacgaaatccgcaattctgacctcaaccccttcacaaaccggcgaatccgctcttgaggactgaaacagagttgagtggcatatctggatagtgcacgaaacttagcctcataagcattaaccgacatcctaccttgctctaggctcaagaactcatcccttttcctatccctcaaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0067G18-NJACb/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0067G18.1" temp_strand="+" temp_description="C06SLm0067G18.1  AC216664.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0067G18 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="38924" stop="40220"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="39224" g_stop="39920" g_length="697"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="698" r_length="698" r_score="0.961"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0067G18.1" gen_strand="+" ref_id="SGN-E356209" ref_strand="+">
        <total_alignment_score>0.961</total_alignment_score>
        <cumulative_length_of_scored_exons>697</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0067G18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E356209" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="39224" e_stop="39920"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCAGACCGCCCAGGGAAAGCGTAACAATGGGCCCTATCGTTCGTCTATCCGTTGCCCCTACCATGTTGTGATGTAGTGGCCCCAGTTTGCCCATTACCTCTGCCGTTTTGGTGACCGCTATTACCTCGACCACCACGCCCTCCAGAAAAACGACCTCTACCATGACCACCTCTACCTCTAGTTATTGGGGGTCTGTAACTTGGTCTGGGACAATTTCTCCTAATATGTCCAATCTCCCCACATCCATAACATTCTTTGGAGTCGATCATATGCCCCTCGGAGAAGTGTTGACCGGTCTGAGGTGGTCCCCCAACTACAGTCTGTAGTGAAGACTGAATTGGTCGGACTGAGTAACTTCCCGAACCTTGTCCTCTAGTGTAAGAACCATTAAACTCACCTACCTTTCGAATTCTTTTTGATGTCGATGTTGTGGTGAAGTCGTCTGGCTTCACTCCTTCCACTTCTATCACAAAGTCTACCACCTCTTGGAAGGATTTTGCCGTTGCCGCTATC-GTAAGGCCGAAATCCGCAATTCTGACCTCAACCCCTTCACAAACCGGCGAATCCGCTCTTGAGGACTGAAACAGAGTTGAGTGGCATATCTGGATAGTGCACGAAACTTAGCCTCATAAGCATTAACCGACATCCTACCTTGCTCTAGGTTCAAGAACTCATCCCTTTTCCTATCCCTCAAAG</genome_strand>
        <mrna_strand>TTCAGACCGCCCAGGGAAAGCGTAACAATGGGCCCTATCGTTCGTCTGTCCGTTGCCCCTACCATGTTGTGATGTAGTGGCCCCAGTTTGCCCATTACCTCTGCCATTTTGGTGACCACCATTACCTCGACCACCACGTCCTCCAGAATAACGGCCTCTACCATGACCACCTCTACCTCTAGCTATTGGGGGTCTATAACTTTGTCTGGGACAATTTTTCCTAATATGTCCAATCTCCCCACATCCATAACATTCTCTGGAGTCAAGCATAGGCCCCTCGGAGAAGTGTTAACCGGTCTGAGGTGGTCTCCCAACTACAGTCTGTAGTGAAGACTGAATTGGTCGGACTGAGTAACTTCCCGAACCCTGTCCTCTAGTGTAAGAACCATTAAACTCACCTCCCTTCCGAAACCTTTTTGATGTCGATGTTGTGGTGAAGTCGTCTGGCTTCACTCCTTCCACTTCTATCACAAAGTCTACCACTTCTTGGAAGGATTTTGCCGTTGCCGCTATCTGTAAGGACGAAATCCGCAATTCTGACCTCAACCCCTTCACAAACCGGCGAATCCGCTCTTGAGGACTGAAACAGAGTTGAGTGGCATATCTGGATAGTGCACGAAACTTAGCCTCATAAGCATTAACCGACATCCTACCTTGCTCTAGGCTCAAGAACTCATCCCTTTTCCTATCCCTCAAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0067G18-NJACb/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E356614" ref_strand="+" ref_description="SGN-E356614 [cTOS-21-N3]">
      <seq>gcgaatccgctcttgaggactgaaacagagttgagtggcatatctggatagtgcacgaaacttagcctcataagcattaactgacaccctaccttgctctaggctcaagaactcatcccttttcttatccctcaaagtccgggggatatacttctccataaacaaactatagaatgaggcccaagtcataggtgatgcctctattggttgacactcgatatgtgaccgccaccacatttgggcgttcccttgaaactgataagtcacaaactccacaccaaaccgttctactatacccatcttgtgtagtagctcgtgacagtcaaccagaaaatcataagcatcctccgattcagcacccttgaagaccggaggtttcaatttcaagaacttactgaaaagttcatgctgatcatttgtcattatagggacagtagtcaaacgtggaaatgtgcctatgtccaatggaacatccatgcggggagccatagtagccgcatgttgtacttctgaaaccggaggtgttggcgcagaaaacactggaggtgcttgaccttgatcagataacccgctaagataagccagaacctgattgatcatctctggggtaggttggggtggcatttcctcattttgcacttgntcagtttccccatccctccctttctctattacttcctcagtcagtggaagagtcactgccctagtatcagatgggct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0067G18-NJACb/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0067G18.1" temp_strand="+" temp_description="C06SLm0067G18.1  AC216664.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0067G18 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="39484" stop="40803"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="39784" g_stop="40503" g_length="720"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="720" r_length="720" r_score="0.964"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0067G18.1" gen_strand="+" ref_id="SGN-E356614" ref_strand="+">
        <total_alignment_score>0.964</total_alignment_score>
        <cumulative_length_of_scored_exons>720</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0067G18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E356614" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="39784" e_stop="40503"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCGAATCCGCTCTTGAGGACTGAAACAGAGTTGAGTGGCATATCTGGATAGTGCACGAAACTTAGCCTCATAAGCATTAACCGACATCCTACCTTGCTCTAGGTTCAAGAACTCATCCCTTTTCCTATCCCTCAAAGTCCGGGGGATATAATTCTCCATAAACAAACTAGAGAATGAGGCCCAAGTCATAGGTGGTGCCTCTATTGGTTGACACTCGATATGTGACCGCCATCACATTTTGGCGTTCCCTTGAAACTGATAAGTCACAAACTCCACACCAAACCGTTCTACTATACCCATCTTGTGTAGTAACTCGTGACAGTCAACCAGAAAATCATAGGCATCCTCCGATTCAGCACCCTTGAAGACCGGAGGTTTCAATTTCAAGAACTTACTGAAAAGTTCATACTGATCATTTGTCATTATAGGCCCAGTAGTCAGACGTGGAAATGTGCCTATGTCCAATGGAACATCCATGCGGGGAGCCATAGTAGCCGCATGTTGTACTTCTGAAACCGGAGGTGTTGGCACAGAAAACACTGGAGGTGCCTGACCTTGATCAGATAACCCGCTAAGATAAGCCAGAACCTGATTGATCATCTCTGGGGTAGGTTGGGGTGGCATTTCCTCATTTTGCACTTGTTCAGTTTCCCCAT-CCTCCCCTTCTCTTATTACTTCCTCGGTCGGTGGAGAAGTCACTGCCCTAGTATCAGATGGGCT</genome_strand>
        <mrna_strand>GCGAATCCGCTCTTGAGGACTGAAACAGAGTTGAGTGGCATATCTGGATAGTGCACGAAACTTAGCCTCATAAGCATTAACTGACACCCTACCTTGCTCTAGGCTCAAGAACTCATCCCTTTTCTTATCCCTCAAAGTCCGGGGGATATACTTCTCCATAAACAAACTATAGAATGAGGCCCAAGTCATAGGTGATGCCTCTATTGGTTGACACTCGATATGTGACCGCCACCACATTTGGGCGTTCCCTTGAAACTGATAAGTCACAAACTCCACACCAAACCGTTCTACTATACCCATCTTGTGTAGTAGCTCGTGACAGTCAACCAGAAAATCATAAGCATCCTCCGATTCAGCACCCTTGAAGACCGGAGGTTTCAATTTCAAGAACTTACTGAAAAGTTCATGCTGATCATTTGTCATTATAGGGACAGTAGTCAAACGTGGAAATGTGCCTATGTCCAATGGAACATCCATGCGGGGAGCCATAGTAGCCGCATGTTGTACTTCTGAAACCGGAGGTGTTGGCGCAGAAAACACTGGAGGTGCTTGACCTTGATCAGATAACCCGCTAAGATAAGCCAGAACCTGATTGATCATCTCTGGGGTAGGTTGGGGTGGCATTTCCTCATTTTGCACTTGNTCAGTTTCCCCATCCCTCCCTTTCTC-TATTACTTCCTCAGTCAGTGGAAGAGTCACTGCCCTAGTATCAGATGGGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0067G18-NJACb/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E352401" ref_strand="+" ref_description="SGN-E352401 [cTOS-9-N1]">
      <seq>aatccgctcttgaggactgaaacagagttgagtggcatatctggatagtgcacgaaacttagcctcataagcattaactgacaccctaccttgctctaggctcaagaactcatcccttttcttatccctcaaagtccgggggatatacttctccataaacaaactatagaatgaggcccaagtcataggtgatgcctctattggttgacactcgatatgtgaccgccaccacatttgggcgttcccttgaaactgataagtcacaaactccacaccaaaccgttctactatacccatcttgtgtagtagctcgtgacagtcaaccagaaaatcataagcatcctccgattcagcacccttgaagaccggaggtttcaatttcaagaacttactgaaaagttcatgctgatcatttgtcattatagggacagtagtcaaacgtggaaatgtgcctatgtccaatggaacatccatgcggggagccatagtagccgcatgttgtacttctgaaaccggaggtgttggcgcagaaaacactggaggtgcttgaccttgatcagataacccgctaagataagccagaacctgattgatcatctctggggtaggttggggtgccatttccctcatttgcacttgttcagtttccccatcctccccttct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0067G18-NJACb/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0067G18.1" temp_strand="+" temp_description="C06SLm0067G18.1  AC216664.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0067G18 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="39487" stop="40750"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="39787" g_stop="40450" g_length="664"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="664" r_length="664" r_score="0.967"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0067G18.1" gen_strand="+" ref_id="SGN-E352401" ref_strand="+">
        <total_alignment_score>0.967</total_alignment_score>
        <cumulative_length_of_scored_exons>664</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0067G18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E352401" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="39787" e_stop="40450"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATCCGCTCTTGAGGACTGAAACAGAGTTGAGTGGCATATCTGGATAGTGCACGAAACTTAGCCTCATAAGCATTAACCGACATCCTACCTTGCTCTAGGTTCAAGAACTCATCCCTTTTCCTATCCCTCAAAGTCCGGGGGATATAATTCTCCATAAACAAACTAGAGAATGAGGCCCAAGTCATAGGTGGTGCCTCTATTGGTTGACACTCGATATGTGACCGCCATCACATTTTGGCGTTCCCTTGAAACTGATAAGTCACAAACTCCACACCAAACCGTTCTACTATACCCATCTTGTGTAGTAACTCGTGACAGTCAACCAGAAAATCATAGGCATCCTCCGATTCAGCACCCTTGAAGACCGGAGGTTTCAATTTCAAGAACTTACTGAAAAGTTCATACTGATCATTTGTCATTATAGGCCCAGTAGTCAGACGTGGAAATGTGCCTATGTCCAATGGAACATCCATGCGGGGAGCCATAGTAGCCGCATGTTGTACTTCTGAAACCGGAGGTGTTGGCACAGAAAACACTGGAGGTGCCTGACCTTGATCAGATAACCCGCTAAGATAAGCCAGAACCTGATTGATCATCTCTGGGGTAGGTTGGGGTGGCATTTCCTCATTTTGCACTTGTTCAGTTTCCCCATCCTCCCCTTCT</genome_strand>
        <mrna_strand>AATCCGCTCTTGAGGACTGAAACAGAGTTGAGTGGCATATCTGGATAGTGCACGAAACTTAGCCTCATAAGCATTAACTGACACCCTACCTTGCTCTAGGCTCAAGAACTCATCCCTTTTCTTATCCCTCAAAGTCCGGGGGATATACTTCTCCATAAACAAACTATAGAATGAGGCCCAAGTCATAGGTGATGCCTCTATTGGTTGACACTCGATATGTGACCGCCACCACATTTGGGCGTTCCCTTGAAACTGATAAGTCACAAACTCCACACCAAACCGTTCTACTATACCCATCTTGTGTAGTAGCTCGTGACAGTCAACCAGAAAATCATAAGCATCCTCCGATTCAGCACCCTTGAAGACCGGAGGTTTCAATTTCAAGAACTTACTGAAAAGTTCATGCTGATCATTTGTCATTATAGGGACAGTAGTCAAACGTGGAAATGTGCCTATGTCCAATGGAACATCCATGCGGGGAGCCATAGTAGCCGCATGTTGTACTTCTGAAACCGGAGGTGTTGGCGCAGAAAACACTGGAGGTGCTTGACCTTGATCAGATAACCCGCTAAGATAAGCCAGAACCTGATTGATCATCTCTGGGGTAGGTTGGGGTGCCATTTCCCTCATTTGCACTTGTTCAGTTTCCCCATCCTCCCCTTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0067G18-NJACb/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E352180" ref_strand="+" ref_description="SGN-E352180 [cTOS-13-I20]">
      <seq>cccttgaagaccggaggtttcaatttcaagaacttactgaaaagttcatgctgatcatttgtcattataggcccagtagtcaaacgtggaaatgtacctatgtgcaatggaacatccatgcggggagccatagtagccgcatgttgtacttctgaaaccggaggtgttggcgcagaaaacactggaggtgcttgaccttgatcagataaaccgctaagataagccagaacctgattgatcatctctggggtaggttggggtggcatttcctcattttgcacttgttcagtttccccatcctccccttctcttattacttcctcagtcggtggaggagtcaccgccctagtaccagatgggctcggttctcgttctcttcctctagatgacgtcctcccacgacctctaccacggccccttgccgctgttctcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0067G18-NJACb/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0067G18.1" temp_strand="+" temp_description="C06SLm0067G18.1  AC216664.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0067G18 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="39842" stop="40875"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="40142" g_stop="40574" g_length="433"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="433" r_length="433" r_score="0.956"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0067G18.1" gen_strand="+" ref_id="SGN-E352180" ref_strand="+">
        <total_alignment_score>0.956</total_alignment_score>
        <cumulative_length_of_scored_exons>433</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0067G18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E352180" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="40142" e_stop="40574"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCCTTGAAGACCGGAGGTTTCAATTTCAAGAACTTACTGAAAAGTTCATACTGATCATTTGTCATTATAGGCCCAGTAGTCAGACGTGGAAATGTGCCTATGTCCAATGGAACATCCATGCGGGGAGCCATAGTAGCCGCATGTTGTACTTCTGAAACCGGAGGTGTTGGCACAGAAAACACTGGAGGTGCCTGACCTTGATCAGATAACCCGCTAAGATAAGCCAGAACCTGATTGATCATCTCTGGGGTAGGTTGGGGTGGCATTTCCTCATTTTGCACTTGTTCAGTTTCCCCATCCTCCCCTTCTCTTATTACTTCCTCGGTCGGTGGAGAAGTCACTGCCCTAGTATCAGATGGGCTAGGTGCTTGTCCTCTCCCTCTAGAGGACGTCCTCCCACGACCTCTTCCACGGCCCCTTGCCGCTGTTCTTC</genome_strand>
        <mrna_strand>CCCTTGAAGACCGGAGGTTTCAATTTCAAGAACTTACTGAAAAGTTCATGCTGATCATTTGTCATTATAGGCCCAGTAGTCAAACGTGGAAATGTACCTATGTGCAATGGAACATCCATGCGGGGAGCCATAGTAGCCGCATGTTGTACTTCTGAAACCGGAGGTGTTGGCGCAGAAAACACTGGAGGTGCTTGACCTTGATCAGATAAACCGCTAAGATAAGCCAGAACCTGATTGATCATCTCTGGGGTAGGTTGGGGTGGCATTTCCTCATTTTGCACTTGTTCAGTTTCCCCATCCTCCCCTTCTCTTATTACTTCCTCAGTCGGTGGAGGAGTCACCGCCCTAGTACCAGATGGGCTCGGTTCTCGTTCTCTTCCTCTAGATGACGTCCTCCCACGACCTCTACCACGGCCCCTTGCCGCTGTTCTCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0067G18-NJACb/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E355114" ref_strand="+" ref_description="SGN-E355114 [cTOS-18-B12]">
      <seq>ttaggttcgttggtctcatcacacaagaacaggtctagtagagtctttaggaacggtagggggacgcctttacttttctttgagaggctataagactttaggaaaatttcaccctttcattctttctttcgtgctactacttgagtccaattggtatctaggcgatacaaattggtatctgaccatcttcactctcttttgcagatggttagaactagagcaacgaccacgtcaacaccaacaccggccagacaagaaacaactgagccagccactggggctgtgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0067G18-NJACb/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0067G18.1" temp_strand="-" temp_description="C06SLm0067G18.1  AC216664.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0067G18 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="41167" stop="40281"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="40867" g_stop="40581" g_length="287"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="286" r_length="286" r_score="0.962"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0067G18.1" gen_strand="-" ref_id="SGN-E355114" ref_strand="+">
        <total_alignment_score>0.962</total_alignment_score>
        <cumulative_length_of_scored_exons>287</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0067G18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E355114" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="40867" e_stop="40581"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTAGGTTCGTTGGTCTCATCACACAAGAACCGGTCTAGTAGAGTCTTAAGGAACGGTAGGGGGACGCCTTTACTTTTCCTTGAGAGGCTATAAGACTTTAGGAAAAATTTCACTCTTTCATTCTTTCTTTCGTGCTACTACTTGAGTCCAATTGGTATCTAGGCGATACGAATTGGTATCTGACCATCTTCACTCTCTTTCGCAGATGGTTAGAACTAGAGCAACGACTACGCCAACACCAACATCGGCCAGACAAGAAACAACTAAGCCAGCCACTGGGGCTGTGG</genome_strand>
        <mrna_strand>TTAGGTTCGTTGGTCTCATCACACAAGAACAGGTCTAGTAGAGTCTTTAGGAACGGTAGGGGGACGCCTTTACTTTTCTTTGAGAGGCTATAAGACTTTAGG-AAAATTTCACCCTTTCATTCTTTCTTTCGTGCTACTACTTGAGTCCAATTGGTATCTAGGCGATACAAATTGGTATCTGACCATCTTCACTCTCTTTTGCAGATGGTTAGAACTAGAGCAACGACCACGTCAACACCAACACCGGCCAGACAAGAAACAACTGAGCCAGCCACTGGGGCTGTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0067G18-NJACb/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E347579" ref_strand="+" ref_description="SGN-E347579 [cTOF-26-K4]">
      <seq>aataaagaaaatagaaagaacaagagagagaggaagaatcgaacgagaagggagaaacaaagcttggagaaaaatttgcttgcttgatcactaatcttcggtggaggtaggttatggttttcatgctttcatagtaaactcttaatagagaatgatatgtattggtagtattgtaaaccctgctatatgcttaattgtatgcatgcatgaacgtgattatataattgtgattatattaagcatgatgaagttattgaatcccaaatcttgataaaaatctaatctcttattaatgatgatgccttggtatagaagaaggcttgatgaataaaagtaatgggattgatgatgccttggtatagagaaggcctgatgatttacagaatgatattagtggatcggagtgtcacgtaccgacacatgcaggggatcgggtgtcacgaaccgacacgtagaattaggggatcgggtgtcacgaactggcacgtagaattaggggatcgggtgtcacgaaccggcacgtagattaggggatcaggtgtcacgaaccgacacgtagaattaggggatcgggtgtcacgaaccgacacgtagaattaggggat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0067G18-NJACb/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0067G18.1" temp_strand="-" temp_description="C06SLm0067G18.1  AC216664.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0067G18 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="42498" stop="34335"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="42198" g_stop="41586" g_length="613"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="605" r_length="605" r_score="0.927"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0067G18.1" gen_strand="-" ref_id="SGN-E347579" ref_strand="+">
        <total_alignment_score>0.927</total_alignment_score>
        <cumulative_length_of_scored_exons>613</cumulative_length_of_scored_exons>
        <coverage percentage="1.013" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0067G18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E347579" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="42198" e_stop="41586"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATAAAGAAAATAGAAAGAACAAGAGAGAGAGGGAGAATCGAACGAGAAGGGAGAAACAAAGCTTGGAGAAAAATTTGCTTGCTTGATCACTAATCTTCGGTGGAGGTAGGTTATGGTTTTCATGCTTTCATAGTAAACTCTTAATAGAGAATGATATGTATTGGTAGTATTGTAAACCCTACTATATGCTTAATTGTATGTTTGCATGAATATGATTGTGTGATTGTGATAAGA-TGAGCATGATGAAAATATTGAATCCCAAATCTTGAAAGGAAACTTTAATATACATTATTAATAATGATGCCTTGGTATAGAAGAAGGCTTGATGAATTAAAGTAATGGGATTGATGATGCCTTGGTATAGAGAAGGCCTGATGATTTACAGAATGATATTAGTGGATCGG-GTGTCACGAACCGACACGTAGAATTAGGGGATCGGGTGTCACGAATCGACACGTAGAATTAGGGGATCGGGTGTCACGAACCGACACGTAGAATTAGGGGATCGGGTGTCACGAACCGACACGTAGAATTAGGGGATCAGGTGTCACAAACCGACACGTAGAATTAGGGGATCGGGTGTCACGAACCTACACGTAGAATATGAGGGAT</genome_strand>
        <mrna_strand>AATAAAGAAAATAGAAAGAACAAGAGAGAGAGGAAGAATCGAACGAGAAGGGAGAAACAAAGCTTGGAGAAAAATTTGCTTGCTTGATCACTAATCTTCGGTGGAGGTAGGTTATGGTTTTCATGCTTTCATAGTAAACTCTTAATAGAGAATGATATGTATTGGTAGTATTGTAAACCCTGCTATATGCTTAATTGTATGCATGCATGAACGTGATTATATAATTGTGATTATATTAAGCATGATGAAGTTATTGAATCCCAAATCTTGATA--AAAATCTAATCT-C-TTATTAATGATGATGCCTTGGTATAGAAGAAGGCTTGATGAATAAAAGTAATGGGATTGATGATGCCTTGGTATAGAGAAGGCCTGATGATTTACAGAATGATATTAGTGGATCGGAGTGTCACGTACCGACACAT-G---CAGGGGATCGGGTGTCACGAACCGACACGTAGAATTAGGGGATCGGGTGTCACGAACTGGCACGTAGAATTAGGGGATCGGGTGTCACGAACCGGCACGTAG-ATTAGGGGATCAGGTGTCACGAACCGACACGTAGAATTAGGGGATCGGGTGTCACGAACCGACACGTAGAAT-TAGGGGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0067G18-NJACb/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E746416" ref_strand="+" ref_description="SGN-E746416 [GI|47105546]">
      <seq>gccgtctatttgggttagtcatatgaatttgagaaacccaattagccattcaaagagtggcaaaatgcagatcttgtgagatttttgtgtgtttgtattcattcgttgatcgagcatgagatagagatgaatttgttgggcagagatcgaattgaggcatttgtttccattttcgttactcttcttcctcacgagctctcagcattgctatactcttcctccacttttttcttcattttgagcgcatactttgtggttcttcctttacgtgatgaaggagctatatctttgggattggggaatctccccagcttgtttgtgggatctttgatactcacactctttgctgcacctctttccaccttaatcttttcattgcctaatctttcaaagtcaaaggctttggtcttgatacacaggttttttggggtcacacttgttgcgttctacatcctgtggcttttttctactcctgggagttcaccatttaatatcaagggactgcactctgtgtcctcaactttaaaacaggagttaaaagtggaggttagtcacacgaatactccaaacttgtcgagttggagcaaccatggttggttctacgtgtcagtgagaattggcctgtttctttgggttgctttgcttaatcttattactatatcttcaacttgggctagagttattgatgtgatggatagtgagtcaggttcaagattgtttgggtttattggtgctggtgctacactaggccagctgtgtggttcgttatttgccacaggaatggcttggttaggaccgtatttacttcttgtttcagcggttctcatggaacttgctgcacagtcatcaaaaggaatcaagaaagacttcttacaacttcctgaagaactatctccaatcagggaagctgataccgatcaagctgaagaggccgagaatataccagggctcacacagagaacaacttccccaaaatctccagcttctgtagcaaagcctcagttctgggctatattggatgggctaaagctcattctttcttcgacttacttgttgcatgtatcattattcctctggctgagtgcagttgtgtcctcctttttttactttcagaaagtaactgttattgctgctgcagtaacagatcccactggtagaagaagattatttgcacagatcaatagcttcattgctatttttatccttgctggacagctcactttgacggggcgcatccttacttttgctggtgttactctagccatttgctccgcaccttttgttgcctttgcgaatctaattgctttagcagtatggcccacatggattgcagtggccatctcagaaaccctgaggaaggtggtcacatacgtcgttaccaggcctgcaagggagcttcttttcactgttgtctcacaggacgagaagtataaagcaaaggtatgcatagatgtgattgttcaaagacttggggatgctacagcagctgcaatgtacaagctactcttcagcactctcaatggcaaggcatcagctgtttctctatatgccctgcctgtctgcttgatgtggatactgacagcattttatctaggacaccggtacaggcaactaactgcggatcatccctctcaacttgttgaaacatgtagaagatacggaacataatgccaaacacgaaaagtttttgtatctttcagaacctttaatggtaaaaatgcctgttttcctccttttcttctttggatcagcttccattcagaatgaagcatgatctcccctcaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0067G18-NJACb/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0067G18.1" temp_strand="-" temp_description="C06SLm0067G18.1  AC216664.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0067G18 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="63107" stop="49629"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62808" g_stop="62575" g_length="234"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="234" r_length="234" r_score="0.996"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="62574" i_stop="62498" i_length="77">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="62497" g_stop="62333" g_length="165"/>
          <reference_exon_boundary r_type="cDNA" r_start="235" r_stop="399" r_length="165" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="62332" i_stop="61569" i_length="764">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.962" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="61568" g_stop="61470" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="400" r_stop="498" r_length="99" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="61469" i_stop="61392" i_length="78">
            <donor d_prob="0.965" d_score="1.00"/>
            <acceptor a_prob="0.967" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="61391" g_stop="61257" g_length="135"/>
          <reference_exon_boundary r_type="cDNA" r_start="499" r_stop="633" r_length="135" r_score="0.993"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="61256" i_stop="61153" i_length="104">
            <donor d_prob="0.944" d_score="1.00"/>
            <acceptor a_prob="0.819" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="61152" g_stop="61084" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="634" r_stop="702" r_length="69" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="61083" i_stop="60922" i_length="162">
            <donor d_prob="0.332" d_score="1.00"/>
            <acceptor a_prob="0.957" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="60921" g_stop="60825" g_length="97"/>
          <reference_exon_boundary r_type="cDNA" r_start="703" r_stop="799" r_length="97" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="60824" i_stop="60724" i_length="101">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="60723" g_stop="60621" g_length="103"/>
          <reference_exon_boundary r_type="cDNA" r_start="800" r_stop="902" r_length="103" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="60620" i_stop="55093" i_length="5528">
            <donor d_prob="0.974" d_score="1.00"/>
            <acceptor a_prob="0.983" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="55092" g_stop="54882" g_length="211"/>
          <reference_exon_boundary r_type="cDNA" r_start="903" r_stop="1113" r_length="211" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="54881" i_stop="54721" i_length="161">
            <donor d_prob="0.928" d_score="1.00"/>
            <acceptor a_prob="0.949" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="54720" g_stop="54607" g_length="114"/>
          <reference_exon_boundary r_type="cDNA" r_start="1114" r_stop="1227" r_length="114" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="54606" i_stop="54024" i_length="583">
            <donor d_prob="0.448" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="54023" g_stop="53892" g_length="132"/>
          <reference_exon_boundary r_type="cDNA" r_start="1228" r_stop="1359" r_length="132" r_score="1.000"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="53891" i_stop="50814" i_length="3078">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="50813" g_stop="50733" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="1360" r_stop="1440" r_length="81" r_score="1.000"/>
        </exon>
        <intron i_serial="11">
          <gDNA_intron_boundary i_start="50732" i_stop="50450" i_length="283">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="12">
          <gDNA_exon_boundary g_start="50449" g_stop="50333" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="1441" r_stop="1557" r_length="117" r_score="1.000"/>
        </exon>
        <intron i_serial="12">
          <gDNA_intron_boundary i_start="50332" i_stop="50154" i_length="179">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.871" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="13">
          <gDNA_exon_boundary g_start="50153" g_stop="49929" g_length="225"/>
          <reference_exon_boundary r_type="cDNA" r_start="1558" r_stop="1782" r_length="225" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="1784" polyA_stop="1799"/>
      <MATCH_line gen_id="C06SLm0067G18.1" gen_strand="-" ref_id="SGN-E746416" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>1782</cumulative_length_of_scored_exons>
        <coverage percentage="0.991" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0067G18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E746416" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="62808" e_stop="62575"/>
          <exon e_start="62497" e_stop="62333"/>
          <exon e_start="61568" e_stop="61470"/>
          <exon e_start="61391" e_stop="61257"/>
          <exon e_start="61152" e_stop="61084"/>
          <exon e_start="60921" e_stop="60825"/>
          <exon e_start="60723" e_stop="60621"/>
          <exon e_start="55092" e_stop="54882"/>
          <exon e_start="54720" e_stop="54607"/>
          <exon e_start="54023" e_stop="53892"/>
          <exon e_start="50813" e_stop="50733"/>
          <exon e_start="50449" e_stop="50333"/>
          <exon e_start="50153" e_stop="49929"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCGTCTATTTGGGTTAGTCATATGAATTTGAGAAACCCAATTAGCCATTCAAAGAGTGGCAAAATGCAGATCTTGTGAGATTTTTGTGTGTTTGTATTCATTCGTTGATCGAGCATGAGATAGAGATGAATTTGTTGGGCAGAGATCGAATTGAGGCATTTGTTTCCATTTTCGTTACTCTTCTTCCTCACGAGCTCTCAGCATTGCTATACTCTTCCTCCACTTTTTTCTTCGTAAGTATCCATTCAATTTCCCCCCATCATAAACATCTTCTTCGCGTTCTTTGATATGAATTTAATGATATATGCAGATTTTGAGCGCATACTTTGTGGTTCTTCCTTTACGTGATGAAGGAGCTATATCTTTGGGATTGGGGAATCTCCCCAGCTTGTTTGTGGGATCTTTGATACTCACACTCTTTGCTGCACCTCTTTCCACCTTAATCTTTTCATTGCCTAATCTTTCAAAGTCAAAGGTAACTCAATAATTCCTTCTTTTATTGCTGTATTAGATTTATTGTCTTTTTACACAAGTGGAGGAGGAGAATCATAGTTAAAAAGTTCTTCATGTGAAATGATATTGTCTAAGTAGAGTAGGAGAATCATAGTTAAAAAGTTCTTCATAGGATATAATATTGTTGAAACCAAGTTTAACACTTCTTTTCAGACTATATTTGATACTTCCAGTGGAATTAATTTACATTAAGTGCTAGTTTTAGACCCTGTTGGAGTTCTAAGTTTAGGCTTTTAACAAAGCCTACAATCTATTCCGCATTTGCATTTGAAATAACTCCTCCATGCCCCCGTTCAGTATTAAGCATGAAATAGTTGTCTTTTGATGATTTCTGTTTGACCTCAATAGAGTGTTGTATTATACCTGTGAAATTGTTGTTTTATTTATGTATTTGGTAAATGATGATTTCGTTGGTGTCATTTGAGAGTAATATTGAATTTTTCCGTGACTCTGAATTATCTGGCTATGTTAATAATGATTCATGAGAAGAAAGAAATTGCAAATCTTGATACTCTACAGCATAAGGATATCAAATTATAGATACTCTTTTTGTTGTCTAATGCAATGAATTAGGTTCAGCAACTTATAGACACTCTTTTTGTTGTTGGATGCTATGAATTGGGTTCAGCTACTTGCGGTGAGACCAATTTGGAGTGTTAGAAGCTGATTAGGTTTGTTTGGGTCTTTTTAAATGTCATCTGTAATGGTCCCTTCTTTAAATTCCAGGCTTTGGTCTTGATACACAGGTTTTTTGGGGTCACACTTGTTGCGTTCTACATCCTGTGGCTTTTTTCTACTCCTGGGAGTTCACCATTTAATATCAAGGTACAAACAACTTCATGATTCTGGAAGCAAATCTTTTGACAATGCAAATGTTATAATTAAAAAATGGCAATAATGCAGGGACTGCTCTCTGTGTCCTCAACTTTAAAACAGGAGTTAAAAGTGGAGGTTAGTCACACGAATACTCCAAACTTGTCGAGTTGGAGCAACCATGGTTGGTTCTACGTGTCAGTGAGAATTGGCCTGTTTCTTTGGGTAAATGCTTTTGCTTTAATTCTCGACTATTATAATAGCAAGTTTTTTTGTCATTTCTTTGGTGTTTGTTTCCTGAATAAGGTTCTTGCTTCATTGTTTCTCAGGTTGCTTTGCTTAATCTTATTACTATATCTTCAACTTGGGCTAGAGTTATTGATGTGATGGATAGTGAGGTAATTGTGCCTCTAATTGATTCATTAATTTGAACAGACCTACCGAAGGGAAGTTCAAGGGTTTTGATATATGCCTTCCATAACCATAATAGATCATGATATTGCTTTTACATTTCATGGTAGCGATTTAAGATACAGTTTAACTTTTTTTCCTGTATACAGTCAGGTTCAAGATTGTTTGGGTTTATTGGTGCTGGTGCTACACTAGGCCAGCTGTGTGGTTCGTTATTTGCCACAGGAATGGCTTGGTTAGGACCGTGTATGTATCTCTATTGATTATCTTGCTTCCTTATTCTTATTATTCTCTTGAGGCTTTATTGTTTTCTATTTTCTTAGTAGTTCCCTTTTGTTTTTTTGCAGATTTACTTCTTGTTTCAGCGGTTCTCATGGAACTTGCTGCACAGTCATCAAAAGGAATCAAGAAAGACTTCTTACAACTTCCTGAAGAACTATCTCCAATCAGGTTTTCTTCTTGTTTTTCTTGTTCTGCCCCAATCAGGGATTATCACTAGATTTTTTAGCTATAGAATTTTCCAGTAGATGAGATTGGGAAAAGAGATAATTAATTGTACAATCAGCTCGCTAAGCTCCCTGCAAAGCTCTTTCCATGCAAGCAATTACTGTTCTTTCTCTCCCTATTAGCCTTGGGATGGTTGTCTCAGGTTTCTTATCCTTTTATTCCTGGTTTTCTGTTGCGTTGCTGTCTCATCGTTCTCTGGATGATGATCTTCTTTACTAGTGAAAGTTCTCTCTACGATAGCATAATTTGTCTAGTCTAGTTGAGTCATGGTGTAAGTTTAATATTGAGATCTCTCTATTTCAGCTCCCTTCATTTTCTTTTTTGGGATACAGAGGTGTTTGATTTAGCAGGAAGTGCTTTTTTATATGAACAAACTGAAAAAAGAGATATGCATTGTACTCACAAGTTACCATGAACCTGATATCTTTATCTGTACAGTTTGATAGTCCAGGAGTATAAAGAGGATGACATTATTTAACTCCTTAAGAACAAACCATAAGAATAATTGTAAATCAGTCTGGACATGTTGTTCCTCTACACTTAACCTATTGAAGGCATCTCTGGTCACAGTGATATGCCCAAATTACACATCTAAAATGAGATATAAAGTGGTAGCTGTCAAATATAGAACCCAATCAAGGTTGGGGTTGAATCCCACAGAGAATATGGTGAGAAATATGTCAGGTGCGGTTATTCGGTTGGTAGTCTTTATTTCAAGGGGGTTTTGCAATATGAAAAGTAAAACTACTTGTATCTTGTGTTATCAATAACCACTTTGGTGAAAGTTTCTTGTCTTCAAATAATGAGAGTGAGCAATGACTATGTTGTTCACGATTTCATAACTTAACAGGTTGATGTGATTAGTGATCTATCTTGCTATTATGCATGCAAAACTAAAGATAAGAGTTTAACAGAAGTCTTTTGACCCAATTAGATGAATATCACTTTATATCCTTTCGGCCTACAAATGTTTATGTTATCAAGCTTCTTAATGGTTTCAGATTGATTATCCTTGTGCCTACAAATGTTTATGTATCAAGCTTCTTAATGGTTTCAGATTGATTATCCTTGTGTGAGCTTAAATCATTAGATGAAGGTTAGTAGCCTCAAGTCTATGTTGTTAATCTCTTTTCCTAACCTTGACTTCTTTTTCAAGCAAGTTAAGATTTATGGTGAGTTCTAATGCTTAATACTGTCCAAAGTAATTAAGCGAAGAGAATAACAATACATGCAGTTTCACCATTCAAGAATCACTAGTTTTTTTAACCTATATTCGTTACTCCATCATGGTCACCACAACCGTAGTTATGGAGTTTAGCTACTCATACTTGCAAAATTCAAATCATAAGACTCCGAAGAATTCATGATAAATAACATGTAACAGATGAGTAGAAGAAACAAATTTGTATCAACCATAAAACAATGCCAAAATAATAGCAAAAATACCGAGAATCAAGAAAAATGATTAATGGATCTTTCTCAACCCTAACGTACACAACATATCCAACAAATTAAGTAACATCCAAAAGAGAACCTAAAACAAGTATTTATAAACGACACTCCTATCCTAAACAAAATAGGAAAACTTAGGCCGCGACACCAATTCATGGACCGTCAAACATATTGACGATCAGTCAAAAAGCAGGAGTCAACCGTGATTCTGTCTTCTAGGTGTGGTCTTCGAGGATCACGAGTCATTCCACAGTTCATGGAATTAATTGACTGTTCGTCGATTGGACCGTAGTCTTGAGAGCCACTTCGCTAAGTTGCAGAGCAGATCTTTAGTTGACTAGAGACAGGACAGTCTGTGATCCTAATCCGATCGTTCGATGATAGTAGCGTAGAAATTAAAGGGCAAGCACATATCCGGGGACTATCTTGGGAGCAGTGGTGGGATCTGTCTTTGATGGTCGCTCGATTGTCTCCCCTATGGCCGAAAGCTCTACCTGCTCACTCTTTTCGGGAAACTCCTCCAACAATAGATCCCTTGAAGTGGACAGTGTTGTCTTTCCCTTAGGAATAGGGTTCGACTCGTTGCAAATTTGTAATAGTGTCTTGGACGTTAATCACCTGCACCGACTGGTCCACACCCACCAATATAGGCACCAAAGTCTCTCTATACAGTGTACAACTATGCGATCAATCAAGGGAATGTGAGTTAGGTCCCAAATCGCAGTGCAATCTCTTGGATCTCCCCCACTATAATTTGGGCTAAATTTTCAGTAAACCTCGACATGAGGCTAGCAAGCGACACGGCCCGATCTAGAGTGAGTGTATTGTCGGCCGTAGTTGGAATCAAGTGTAGGCGTACAATCGTCCATCAGAGCGTCACCGCAAAGATGAGGGATCCGTTGGTGATCAAGATCTTATCATTTAATCAACTAGGCCGACATTTTATTTGTCAGCACTAAGGCTGGCAAACGGACAGGATCGGGTCAACATGACCGGTTTTACCAGAAACCGAACCGGTACCGGATTTACCAGAAAAAACCAACCTATTCCGCCCGGTCCGTTAGTAACCGGTTTGGACCGGATTGGAACCGGGTCTTACCAGTTCATCCGGTACCTTTTTTTTTTTTAAATTTTAATTATTTTAATTATTATATAATATTATATATTTATATTAAAAACTTCAATTGAAAACTTTAAAGTTTATATAAGTTTGAAAATAAATTTATACTTTAAAGTTTATATTGAATTTAAAGTTTTATATTGAACTTAAGTTTGAAATTGAATTTAAAGTTTTTTAAACTTTATATTGAATTTAAAGTTTGAAATTGAATTTAAACTTTAAAGTTTATATTGAATTTAAAGTTTTAATTTAAACTTTTATTAAAATAATTAAAAATTAAATTTATAAAATCACATGAATTAATAATTAATAATTTATGAGAGATTTAAAATTGAGACTTTGAGAGATTGTATAAGTAGTGAATTTGTGATTTAAAATGGAAAAAAAGGTTATATTTATAGTGTAAATGGGTTAGAAAGGGGTGGGGGTGATAGTTGACCGTTTTGGGCCCCAGCCCAACGGTTAGAAGGGCCCAACGGTCATAAAATGACCACTTAATTAAAAAAAATAAAATTGAAAAACCGACTAAATCGGTTCTTACCGGATCGGACCGGTCCGGAACCGTTTCTTACCGAACCGGTTCAACAGGATAAAAAATCGGGAACCGGTCCGGTATACAAAAAGACCGGTACGGGAACCAGACTGGAACCGGACCGGACCGGCCAAAAACCGGTCCGTTTGCCACCCTTAGTCAACACCGATGCTAGCCAGCTAATCTAAATCCTTTGACCCTCTAACTTGTACCTAAACTCCACTTTGTTAAGCGGCACCTCATAATCTGGCACAAATATAGACTTCTGGACGGTGCACTTTGAAATATTAACTGACACTTATTGTTCCGCACACTGTCCAGTGGTTGCTGACCCTTGGTAGACTCCTTGTTCTTCCAATAAGGGTGGTTGTATATATAGAGTAGAATTTGCAGATCAAGATGGAGTTGTACTCAAATGGTGTTTGGCGCATCAACCCCAATACATTATGATAAAGAAAAAGCCTGAAACTCGAGCATCTCTCCCAAATCAGAGGATCTGATATGTGCCTCATCCAACACACTCCTTTTGATGTTACCCCTCTGATTGGTTAGGAGCCCCTCCTAGAATATCTCTCTCATGCTATCGACCTGCCACTAGAGGTCTTCTCTATATTGGGAATTCTTGCCTCTGATCTCAAGTTGCCTCTTTTTTTCTGAAGAGGAGGTTGTGGCCATAGACTCGTCCCTGTCGCTCGGTGACCCTATATGTCCGGAACTAGCATCCCCCGGACTCACCAAGCTGCTCGAAGTACAGGTTTACACTCCCTCTTCAGACTGGGGAGAGGGTGCATGTTGCTGCCGTGCTTGCAACCTTGTGGTACAAGGGTTCAACTGTGGTTGTTCTTCTATCTCCGAGTCCGGAGTATTTCGCAAGCGGGAAGCAATCTCTCAGGCCTTCCTCCCTCGTCGTGGTCGTGATTTTGAAGTTATGGTACTGATGGGTATAGTGGTTAATATAAGATTTTTTGTCAGTAACTCTTGTTGCATAGGTTTACGACGTTTAATTATATTTAAAAAAAGGGAGAAATGATTTCCCTTTGTGTTGATTTTATTGAACGATTGACCAAAATATTAATAATAAATAAATAATAAAAATGAAATATTTTTTTATTCAGTTTTATTAATAAATTGCATGAATTTAGAACAATTAAATAATGATATTTCTACACCTATGGAATTAGTCGTCCTAATCAATTTGTCCATTTAGATTTCTCTAGGTGGAATAATAAGAAAAGTAAAATTCAAAAGAGTTTTTAAAAAGTTTTTGGTTTTAGTATTTTAGAAAGGGGTGGGAGGTATCTATACTTGAATAACTATAAACGAACCCTCCTAGATGTTCTGACGCTTGATTCCTAAATAGGGTTGAATCTAAGATGTGGAAGATACATTGGTTGAAGCTTTTCAAGAAGTTTTTATTTCTCCTAGAACTTCACGGACACTATCAATATACGGGTGAGGAGTCTAATTGATTAGAAAGTGGCTTTCTTCACTTTAGGAGCCACCGCAAGACACAGTCATACCCTACTAAAGGTGTTTAAATGGTACAAGTCTAAGTTGAGGTGGCTAAATGAAAAACAGGGCCAACTTTAGGTATCTGTCAATGTGTTTAGCCTTATTTGTCACTCCCTCTATCCCATATTATGTCGCACACTCTCCTTTTTAGTTTGTCCCAAAAGAATGACACCTTTTTATATTTAAAAATAATTTAAATTTAAGCATCCCATTTTACCGTGAATGAGATGATTTATAACGACACAAATGTCTATGACTTGTTTCAGAAAACAAGTTTTAAAAGTTAAGTCTTGCTTTCTTAAACTCCATATTCCTGTCAGATACCCCACTAAAATTGTGAGGAATGAAGTATTACATATCTATAAAAGGAAATAGAAGGAGGATTGAAGGTAGAGACAAGGGGCGACTTCTAGCTTGGCGATAGTATATCTAATATATAGCTAAAACGTGAAAAAGTAGGATGATTTGTTACTAAAAAGAAGATTTCACATAGAGACAGGTCCACTATACACCGAGTTTCAAATCGTGCACCTTTGTCCTTCTGGGATTTCTCAGTTATCAGCATAAATGTATAAACAAAAAGAAGACACACTGCGAAGTTTAAAACTATTGGATACTATTAACTTTCTAGACATACATCTTTTGATATACAGGAAGAATGAAGTCTAGCACACATACTAGCAATGAAAAAGAGGCCTTTACATGAATGTCCTTGCATGACTTACTTTCTCTATCCCCTTCCTCACCCCACCCCACCCGAAAAGAATATTATAGTCGAATAGTCTCTAACCTTTGTGGGATTATACTGGGTATGTTGTTGTTGTTGTAGTCTCTAACTTTAGCGTTTTTTTTTAGGGAAGCTGATACCGATCAAGCTGAAGAGGCCGAGAATATACCAGGGCTCACACAGAGAACAACTTCCCCAAAATCTCCAGCTTCTGTAGCAAAGCCTCAGTTCTGGGCTATATTGGATGGGCTAAAGCTCATTCTTTCTTCGACTTACTTGTTGCATGTATCATTATTCCTCTGGCTGAGTGCAGTTGTGTCCTCCTTTTTTTACTTTCAGGTATGAGAAGAATTTCCTTTTATTAAGTGACAGAATGGATCACATGATCTGTAATGTGGTGTATTTATGTGATTTACTAATCTCACATAGATGACCGCCTTTATGGAAAAACCGCTTATAGTTACTTCAGCCTCACTCCCAACCTTTTGACACTTTTGCAGAAAGTAACTGTTATTGCTGCTGCAGTAACAGATCCCACTGGTAGAAGAAGATTATTTGCACAGATCAATAGCTTCATTGCTATTTTTATCCTTGCTGGACAGCTCACTTTGACGGTATGGTGTAGATGTATATAACATGCAAAAGTTCAGTCATGAAGCTAACCCTATTTCTCCATTTTGTGTGTCTGAGGGAAAGGGGGTTTGAGGGGATATTCAATTTCTCCAATTTGTGGAAGTGTATACAATCTACATGCTACTTGAACAACTCTAATTTAAAACTTCTCTTATCTACTCTCACATGTGATGGAGGTTCTGACTGGAGCCTGTGGTGAAGGCTTCTTCCTCTCCAAATATTCTTGTCTTTCGCATCAGTTTCCTTATCTGAGTTCCACCATAGAACATAAACTATTTCTATCACTTGGGGGTGTGAAAGAGTGTTAATATCTTGTTCGGTAATGTCAGCTCCTAGTGAGTTAGAAGTCTATTTTGAAGGATCTACAAAGAATTCCCATGTATGCAAGTCAGAGTAAGTAGAAATTTGAAGTGATAAGATATCTAGGACATTTTTTTAAGTTGATCAGTTTCCTATTTTCTTGAACTGCAGTTCCCTTTCTTTCTTTTATATTTCTCTACATACAAAACATGGTATCTCTAGTGTCACAAGTTTTAAAAGTCCTTATTCACCACTTGGTTGCAGGGGCGCATCCTTACTTTTGCTGGTGTTACTCTAGCCATTTGCTCCGCACCTTTTGTTGCCTTTGCGAATCTAATTGCTTTAGCAGTATGGCCCACATGGATTGCAGTGGCCATCTCAGAAACCCTGAGGAAGGTATATTTTCCTTGCATCCTTTTCTCAACCTCTAAAGAAATGTAATAAAAATAATGACGAGAAGTTGTAAAAGAGGAACACCATTCTGGCATTCGTACAATTTTTAGTTGGCAGAATACATTATTACCCGATAGACTTGGCACAATTTATTTAGAGCTTGTGTGGATTGACTTTTGGCTTATGACTTGTAGCCAAAAGTCACAAGTTCGAATTTTTTTTATTTTGGCTTATAAATAAGTGCTTATAAGCACTTATTTAGTTTACCCAAACACTACAAAAATCCTTAAAAGCTATTTTGGCTTAAAAACACCTAAAATAAGCTAATCCAAAATGGACACTTGGTCCACACCTAAACTTCCGGTAGTTCTCATTACCTGCTTCTCCCTATAGACCAATCTCACCTGATGGAGGTGAGACCCACGCGCTGCCATTTGGATTCTTTGTTGATGTGTCATTTTTTAAAAATAAAATTCTTTTTACAGTCTTTGAATTTTTGGATCATCTTTTTCGGGCCAAATTTGTAAAAGAGTTAGCAACTCCATTATTGAGGCGAACTTTTTTTTTTGACAGAATATAATGGATTGGACTGTGCATCCGATTTTTCTATTTCTGTATTGACCATGTACCAAGAAAGAAATGCATAGCATATATATATAAACATAATATATACTCTATTAGTTCAACTTTTTGGTATTTGTTTTCTAAAATCTAAAACCAAACCAAGAAACCAAAATTTCTAATCCGAAACCATACCAAAAAACCAAACTAAATAACAAAAAAAATTGGTTTGGTTTGATTTTTGAGTTAATCCAAATTATGCACACCCCTAATAGTAAACTCTTTATGGAATTGATAAGAAATATAAGTTGGAAACTAAAGTTCATTGCATCAAAAGAAAAGAAGAAATAAAATTAGCAAGCTGGAAATCACAACATATCTCTAGGGGTAGCTGGTTGACCTTGATTAATTATGTTCTTGATTCACTACCAATCTATATGATGTTAGTATTCCAAATTCCCAAGAGGGTAATCAATAAGTTAGATAAATGAGAGGAATATTCCTCTGGCAAGGAAACAGTGAGAATTAAGGCTACAACTTGGTTAAATGGGATGCTGTGATAGTGTGAAAGAAGCAATGGGGTTCGGGAATAAAGAACTTGATGAATTAGAGCGGAACCCTTAGGATAAAATGGCTGTGGAAGTTCATTTATGAAGAGCAGAGCTACTGGAAGGAAGTCATTAACACAAAATATGTTAAGAAGTCAACTGGATGACCAAAGAGGTGACTACACCATATGGGGCATTGTTTCGAGATGCATTAGATCTCTGTGGCATGAGTTTAATGCTAACACAAAGATCAAAGTGGGGATGGACAGAAAACAGAATTTTTGAAGGATGTTTGGCATGAAGCAGGTAGGCTATAGAGTTCCTTTCCTTCCATATTGCCCACCATATATTAGCTGTGATTTCTCCATTTGTCTCTGTTCTTGGATTGCTTTCCTGCTTCCTTGCAACTCTGGTTTGCTTCTGTGGTCTTGGCAGGCATGGTCCATGGCCTACCCTTAAGATTCAGGAATAACTTCCACTGTTGGCCAGTGATCTTGCAATTTAGAAAGAGATGCTTACCTGTCTCAGCAGTTCCCCCTCCCCCCCACACACACACACACAAAAAAAAAAAAATCTAGAACGTAATGGTATCCACCTCCTCTTTAAGTTGTCTCGAGTCCGTACAACTTCTTTGGCTCACAACCAGACAAAACAGGCAACTTTGAGTGGGATTTCTGACTTCCAGGTTCCACGCCAGTGACTGTGAGGCTGATGCTTAAAACTATCCTTCTGACCGCCTTTCCGCCACAAAAATGTCTTGATCCCCTTCCAGTCCATTAGATTGCTCAGTGGTGTTGAAAATATCTGCTACCCTCTTGGATCTCACAGTCATTAATTGTCTTCTAAAGATGAAGTTCCACCCTTGAGGAGTCCAAGGATCTACTATGGTCTTCTGCTGGTGGGATACTAGAGGATATATATTAAGATACAAGACCTAGAACTGTTGATAGTATAGAGAACAGTATGCAAGAAGTCAAGCTATATTGTTTTATGCTTCTACCTTTTTTTGGTGTAATCAGTTATACTCAAATGATACTATCTCCGTAATTGATGTACCAGACTCAATTTAGGAAAAGATAGTAGGATTTGAACTACGTGTAAATATTGACCAGTACAGTTTTAGTACTCTCTTTTGAGGAATATACAAAGTGACCAGTTTGAAAAAAAATAAAAAGAATTAGGATGTTGGTACTCTATTATATATTTATATTGTCTAAAGCTTTTATTATTGGCCAGAGATAATGAAGTTCTAGCCAAGTTTTTCTTTATAGATTTGTCCCGAAAAAGAAAAATTACATAGTTGAAATGAATAGACATCACATCTAAAGAAGCAACAAAAAGAAATACACAATTGCAACTTCATTATTTTGGCTAAAACTTTTTCTATTTGGCTAAAAATAATGAAATTTCAACTATGTTCTTCACAGTTTTGTCTTAAATAATGATACAAAATAGGAATAAATAGGTATTGAAGCCAAAGAAGAAATATACAGTTAGAACCCATTATTGTAGCTAAAACTTTTTATTTGGCTAAAAATAATGGTGTTCAGCCAATTTTTTACATTTTTTGTGTGAAGAAATACACAGTTTTCCTTCGAAAGGAGAAGAAGAAGTTCTAAGATGGGGTAAAATATGCCTTGTATATTATCAAGAAGCAACGAAAAGACCATTGGAACAAATAGACTATCTATGTGGCACTTAATGGTTGGAAAGTACCTCACTCGGAAGCTAATTTTTCAATTTTCTTTACTTCCATGCCCTTAGAAGAGAGTGTATCCACACTCTTTCCTGCATCACCATCCAAGGGGTCTAGGCTATCAAAAACCCAAGTATGCAATGGATAGTTAGAACAAAGAAAAGTTAAGGTGTACTGAATAAGCTGTGCCAACAGATGTTGTGACGAATAAAAGATAAGTAGGCGTAGGCATACACTTCTGCAATTGAGCCTCATATTTTTTGTCTTTTACGATAGGTGGTCACATACGTCGTTACCAGGCCTGCAAGGGAGCTTCTTTTCACTGTTGTCTCACAGGACGAGAAGTATAAAGCAAAGGTATTTACAAAAATAGTGACCTGAAAGATTATCATTGTTCCATCTTACATATTAGCAGCAGCTTGAATTGTGAATATCCTGTCTGTAGCAAATCTCGATTTCCTATTAAAATCTTTCTGAAAGGATATAGCAAAGCTAGTAGGTTAATATCATTTTATTAGGTCTGCACAAGTGTTTCATGACACTTGAAAGGATTGTTGTGGTTATAAGTGTCACTTGAATATCCCTAGCAGTAGAATGATTCTATTGTTACTTTTTGTGGTATTCCAATGTTTTTATGCAGGTATGCATAGATGTGATTGTTCAAAGACTTGGGGATGCTACAGCAGCTGCAATGTACAAGCTACTCTTCAGCACTCTCAATGGCAAGGCATCAGCTGTTTCTCTATATGCCCTGCCTGTAAGTAAAACCCTCCTTGACAGCACTACTCTTAATGTCTTGAAATTATCGTTTTAGATTTATACAATTCCAGATGATTGGATGGTGGATTCACACTACTGCAGACTTCTATATAGTGATTGAAAAGCCTCAGAGAAATAAAGGTTGAACGTTCAACGTAACTTTGGTTCTTCTTTCAGGTCTGCTTGATGTGGATACTGACAGCATTTTATCTAGGACACCGGTACAGGCAACTAACTGCGGATCATCCCTCTCAACTTGTTGAAACATGTAGAAGATACGGAACATAATGCCAAACACGAAAAGTTTTTGTATCTTTCAGAACCTTTAATGGTAAAAATGCCTGTTTTCCTCCTTTTCTTCTTTGGATCAGTTTCCATTCAGAATGAAGCATGATCTCCCCT</genome_strand>
        <mrna_strand>GCCGTCTATTTGGGTTAGTCATATGAATTTGAGAAACCCAATTAGCCATTCAAAGAGTGGCAAAATGCAGATCTTGTGAGATTTTTGTGTGTTTGTATTCATTCGTTGATCGAGCATGAGATAGAGATGAATTTGTTGGGCAGAGATCGAATTGAGGCATTTGTTTCCATTTTCGTTACTCTTCTTCCTCACGAGCTCTCAGCATTGCTATACTCTTCCTCCACTTTTTTCTTC.............................................................................ATTTTGAGCGCATACTTTGTGGTTCTTCCTTTACGTGATGAAGGAGCTATATCTTTGGGATTGGGGAATCTCCCCAGCTTGTTTGTGGGATCTTTGATACTCACACTCTTTGCTGCACCTCTTTCCACCTTAATCTTTTCATTGCCTAATCTTTCAAAGTCAAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTTGGTCTTGATACACAGGTTTTTTGGGGTCACACTTGTTGCGTTCTACATCCTGTGGCTTTTTTCTACTCCTGGGAGTTCACCATTTAATATCAAG..............................................................................GGACTGCACTCTGTGTCCTCAACTTTAAAACAGGAGTTAAAAGTGGAGGTTAGTCACACGAATACTCCAAACTTGTCGAGTTGGAGCAACCATGGTTGGTTCTACGTGTCAGTGAGAATTGGCCTGTTTCTTTGG........................................................................................................GTTGCTTTGCTTAATCTTATTACTATATCTTCAACTTGGGCTAGAGTTATTGATGTGATGGATAGTGAG..................................................................................................................................................................TCAGGTTCAAGATTGTTTGGGTTTATTGGTGCTGGTGCTACACTAGGCCAGCTGTGTGGTTCGTTATTTGCCACAGGAATGGCTTGGTTAGGACCGT.....................................................................................................ATTTACTTCTTGTTTCAGCGGTTCTCATGGAACTTGCTGCACAGTCATCAAAAGGAATCAAGAAAGACTTCTTACAACTTCCTGAAGAACTATCTCCAATCAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................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........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGTCACATACGTCGTTACCAGGCCTGCAAGGGAGCTTCTTTTCACTGTTGTCTCACAGGACGAGAAGTATAAAGCAAAG...........................................................................................................................................................................................................................................................................................GTATGCATAGATGTGATTGTTCAAAGACTTGGGGATGCTACAGCAGCTGCAATGTACAAGCTACTCTTCAGCACTCTCAATGGCAAGGCATCAGCTGTTTCTCTATATGCCCTGCCT...................................................................................................................................................................................GTCTGCTTGATGTGGATACTGACAGCATTTTATCTAGGACACCGGTACAGGCAACTAACTGCGGATCATCCCTCTCAACTTGTTGAAACATGTAGAAGATACGGAACATAATGCCAAACACGAAAAGTTTTTGTATCTTTCAGAACCTTTAATGGTAAAAATGCCTGTTTTCCTCCTTTTCTTCTTTGGATCAGCTTCCATTCAGAATGAAGCATGATCTCCCCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0067G18-NJACb/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E559521" ref_strand="+" ref_description="SGN-E559521 [19031]">
      <seq>ctcccatcagattgattatccttggtgagagcttaaatcattagatgaagggaagctgataccgatcaagctgaagaggccgagaatataccagggctcacacagagaacaacttccccaaaatctccagcttctgtagcaaagcctcagttctgggctatattggatgggctaaagctcattctttcttcgacttacttgttgcacgtatcattattcctttggctgagtgcagttgtgtcctcctttttttactttcagaaagtaactgttattgctgctgcagtgacagatcctgctggtagaagaagattatttgcacagatcaatagttttattgctatttttatccttggctggacagctcactttgacggggcgcatccttacttttgctggtgttactctagccatttgctctgcaccttttgttgcctttgcgaatctaattgctttagcagtatggcccacatggattgcagtggccatctcagaaaccctgaggaaggtggtcacatacgtcgttaccaggcctgcaagggagcttcttttcactgttgtctcacaggacgagaagtataaagcaaaggtatgcatagatgtgattgttcaaagacttggggatgctacagcagctgcaatgtacaagctactcttcagcactc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0067G18-NJACb/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0067G18.1" temp_strand="-" temp_description="C06SLm0067G18.1  AC216664.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0067G18 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="59810" stop="50074"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="59506" g_stop="59468" g_length="39"/>
          <reference_exon_boundary r_type="cDNA" r_start="11" r_stop="50" r_length="40" r_score="0.923"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="59467" i_stop="55093" i_length="4375">
            <donor d_prob="0.970" d_score="0.92"/>
            <acceptor a_prob="0.983" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="55092" g_stop="54882" g_length="211"/>
          <reference_exon_boundary r_type="cDNA" r_start="51" r_stop="261" r_length="211" r_score="0.991"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="54881" i_stop="54721" i_length="161">
            <donor d_prob="0.928" d_score="0.98"/>
            <acceptor a_prob="0.949" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="54720" g_stop="54607" g_length="114"/>
          <reference_exon_boundary r_type="cDNA" r_start="262" r_stop="376" r_length="115" r_score="0.939"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="54606" i_stop="54024" i_length="583">
            <donor d_prob="0.448" d_score="0.92"/>
            <acceptor a_prob="0.991" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="54023" g_stop="53892" g_length="132"/>
          <reference_exon_boundary r_type="cDNA" r_start="377" r_stop="508" r_length="132" r_score="0.992"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="53891" i_stop="50814" i_length="3078">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="50813" g_stop="50733" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="509" r_stop="589" r_length="81" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="50732" i_stop="50450" i_length="283">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="50449" g_stop="50374" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="590" r_stop="665" r_length="76" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0067G18.1" gen_strand="-" ref_id="SGN-E559521" ref_strand="+">
        <total_alignment_score>0.984</total_alignment_score>
        <cumulative_length_of_scored_exons>653</cumulative_length_of_scored_exons>
        <coverage percentage="0.982" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0067G18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E559521" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="59506" e_stop="59468"/>
          <exon e_start="55092" e_stop="54882"/>
          <exon e_start="54720" e_stop="54607"/>
          <exon e_start="54023" e_stop="53892"/>
          <exon e_start="50813" e_stop="50733"/>
          <exon e_start="50449" e_stop="50374"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTGATTATCCTTG-TGTGAGCTTAAATCATTAGATGAAGGTTAGTAGCCTCAAGTCTATGTTGTTAATCTCTTTTCCTAACCTTGACTTCTTTTTCAAGCAAGTTAAGATTTATGGTGAGTTCTAATGCTTAATACTGTCCAAAGTAATTAAGCGAAGAGAATAACAATACATGCAGTTTCACCATTCAAGAATCACTAGTTTTTTTAACCTATATTCGTTACTCCATCATGGTCACCACAACCGTAGTTATGGAGTTTAGCTACTCATACTTGCAAAATTCAAATCATAAGACTCCGAAGAATTCATGATAAATAACATGTAACAGATGAGTAGAAGAAACAAATTTGTATCAACCATAAAACAATGCCAAAATAATAGCAAAAATACCGAGAATCAAGAAAAATGATTAATGGATCTTTCTCAACCCTAACGTACACAACATATCCAACAAATTAAGTAACATCCAAAAGAGAACCTAAAACAAGTATTTATAAACGACACTCCTATCCTAAACAAAATAGGAAAACTTAGGCCGCGACACCAATTCATGGACCGTCAAACATATTGACGATCAGTCAAAAAGCAGGAGTCAACCGTGATTCTGTCTTCTAGGTGTGGTCTTCGAGGATCACGAGTCATTCCACAGTTCATGGAATTAATTGACTGTTCGTCGATTGGACCGTAGTCTTGAGAGCCACTTCGCTAAGTTGCAGAGCAGATCTTTAGTTGACTAGAGACAGGACAGTCTGTGATCCTAATCCGATCGTTCGATGATAGTAGCGTAGAAATTAAAGGGCAAGCACATATCCGGGGACTATCTTGGGAGCAGTGGTGGGATCTGTCTTTGATGGTCGCTCGATTGTCTCCCCTATGGCCGAAAGCTCTACCTGCTCACTCTTTTCGGGAAACTCCTCCAACAATAGATCCCTTGAAGTGGACAGTGTTGTCTTTCCCTTAGGAATAGGGTTCGACTCGTTGCAAATTTGTAATAGTGTCTTGGACGTTAATCACCTGCACCGACTGGTCCACACCCACCAATATAGGCACCAAAGTCTCTCTATACAGTGTACAACTATGCGATCAATCAAGGGAATGTGAGTTAGGTCCCAAATCGCAGTGCAATCTCTTGGATCTCCCCCACTATAATTTGGGCTAAATTTTCAGTAAACCTCGACATGAGGCTAGCAAGCGACACGGCCCGATCTAGAGTGAGTGTATTGTCGGCCGTAGTTGGAATCAAGTGTAGGCGTACAATCGTCCATCAGAGCGTCACCGCAAAGATGAGGGATCCGTTGGTGATCAAGATCTTATCATTTAATCAACTAGGCCGACATTTTATTTGTCAGCACTAAGGCTGGCAAACGGACAGGATCGGGTCAACATGACCGGTTTTACCAGAAACCGAACCGGTACCGGATTTACCAGAAAAAACCAACCTATTCCGCCCGGTCCGTTAGTAACCGGTTTGGACCGGATTGGAACCGGGTCTTACCAGTTCATCCGGTACCTTTTTTTTTTTTAAATTTTAATTATTTTAATTATTATATAATATTATATATTTATATTAAAAACTTCAATTGAAAACTTTAAAGTTTATATAAGTTTGAAAATAAATTTATACTTTAAAGTTTATATTGAATTTAAAGTTTTATATTGAACTTAAGTTTGAAATTGAATTTAAAGTTTTTTAAACTTTATATTGAATTTAAAGTTTGAAATTGAATTTAAACTTTAAAGTTTATATTGAATTTAAAGTTTTAATTTAAACTTTTATTAAAATAATTAAAAATTAAATTTATAAAATCACATGAATTAATAATTAATAATTTATGAGAGATTTAAAATTGAGACTTTGAGAGATTGTATAAGTAGTGAATTTGTGATTTAAAATGGAAAAAAAGGTTATATTTATAGTGTAAATGGGTTAGAAAGGGGTGGGGGTGATAGTTGACCGTTTTGGGCCCCAGCCCAACGGTTAGAAGGGCCCAACGGTCATAAAATGACCACTTAATTAAAAAAAATAAAATTGAAAAACCGACTAAATCGGTTCTTACCGGATCGGACCGGTCCGGAACCGTTTCTTACCGAACCGGTTCAACAGGATAAAAAATCGGGAACCGGTCCGGTATACAAAAAGACCGGTACGGGAACCAGACTGGAACCGGACCGGACCGGCCAAAAACCGGTCCGTTTGCCACCCTTAGTCAACACCGATGCTAGCCAGCTAATCTAAATCCTTTGACCCTCTAACTTGTACCTAAACTCCACTTTGTTAAGCGGCACCTCATAATCTGGCACAAATATAGACTTCTGGACGGTGCACTTTGAAATATTAACTGACACTTATTGTTCCGCACACTGTCCAGTGGTTGCTGACCCTTGGTAGACTCCTTGTTCTTCCAATAAGGGTGGTTGTATATATAGAGTAGAATTTGCAGATCAAGATGGAGTTGTACTCAAATGGTGTTTGGCGCATCAACCCCAATACATTATGATAAAGAAAAAGCCTGAAACTCGAGCATCTCTCCCAAATCAGAGGATCTGATATGTGCCTCATCCAACACACTCCTTTTGATGTTACCCCTCTGATTGGTTAGGAGCCCCTCCTAGAATATCTCTCTCATGCTATCGACCTGCCACTAGAGGTCTTCTCTATATTGGGAATTCTTGCCTCTGATCTCAAGTTGCCTCTTTTTTTCTGAAGAGGAGGTTGTGGCCATAGACTCGTCCCTGTCGCTCGGTGACCCTATATGTCCGGAACTAGCATCCCCCGGACTCACCAAGCTGCTCGAAGTACAGGTTTACACTCCCTCTTCAGACTGGGGAGAGGGTGCATGTTGCTGCCGTGCTTGCAACCTTGTGGTACAAGGGTTCAACTGTGGTTGTTCTTCTATCTCCGAGTCCGGAGTATTTCGCAAGCGGGAAGCAATCTCTCAGGCCTTCCTCCCTCGTCGTGGTCGTGATTTTGAAGTTATGGTACTGATGGGTATAGTGGTTAATATAAGATTTTTTGTCAGTAACTCTTGTTGCATAGGTTTACGACGTTTAATTATATTTAAAAAAAGGGAGAAATGATTTCCCTTTGTGTTGATTTTATTGAACGATTGACCAAAATATTAATAATAAATAAATAATAAAAATGAAATATTTTTTTATTCAGTTTTATTAATAAATTGCATGAATTTAGAACAATTAAATAATGATATTTCTACACCTATGGAATTAGTCGTCCTAATCAATTTGTCCATTTAGATTTCTCTAGGTGGAATAATAAGAAAAGTAAAATTCAAAAGAGTTTTTAAAAAGTTTTTGGTTTTAGTATTTTAGAAAGGGGTGGGAGGTATCTATACTTGAATAACTATAAACGAACCCTCCTAGATGTTCTGACGCTTGATTCCTAAATAGGGTTGAATCTAAGATGTGGAAGATACATTGGTTGAAGCTTTTCAAGAAGTTTTTATTTCTCCTAGAACTTCACGGACACTATCAATATACGGGTGAGGAGTCTAATTGATTAGAAAGTGGCTTTCTTCACTTTAGGAGCCACCGCAAGACACAGTCATACCCTACTAAAGGTGTTTAAATGGTACAAGTCTAAGTTGAGGTGGCTAAATGAAAAACAGGGCCAACTTTAGGTATCTGTCAATGTGTTTAGCCTTATTTGTCACTCCCTCTATCCCATATTATGTCGCACACTCTCCTTTTTAGTTTGTCCCAAAAGAATGACACCTTTTTATATTTAAAAATAATTTAAATTTAAGCATCCCATTTTACCGTGAATGAGATGATTTATAACGACACAAATGTCTATGACTTGTTTCAGAAAACAAGTTTTAAAAGTTAAGTCTTGCTTTCTTAAACTCCATATTCCTGTCAGATACCCCACTAAAATTGTGAGGAATGAAGTATTACATATCTATAAAAGGAAATAGAAGGAGGATTGAAGGTAGAGACAAGGGGCGACTTCTAGCTTGGCGATAGTATATCTAATATATAGCTAAAACGTGAAAAAGTAGGATGATTTGTTACTAAAAAGAAGATTTCACATAGAGACAGGTCCACTATACACCGAGTTTCAAATCGTGCACCTTTGTCCTTCTGGGATTTCTCAGTTATCAGCATAAATGTATAAACAAAAAGAAGACACACTGCGAAGTTTAAAACTATTGGATACTATTAACTTTCTAGACATACATCTTTTGATATACAGGAAGAATGAAGTCTAGCACACATACTAGCAATGAAAAAGAGGCCTTTACATGAATGTCCTTGCATGACTTACTTTCTCTATCCCCTTCCTCACCCCACCCCACCCGAAAAGAATATTATAGTCGAATAGTCTCTAACCTTTGTGGGATTATACTGGGTATGTTGTTGTTGTTGTAGTCTCTAACTTTAGCGTTTTTTTTTAGGGAAGCTGATACCGATCAAGCTGAAGAGGCCGAGAATATACCAGGGCTCACACAGAGAACAACTTCCCCAAAATCTCCAGCTTCTGTAGCAAAGCCTCAGTTCTGGGCTATATTGGATGGGCTAAAGCTCATTCTTTCTTCGACTTACTTGTTGCATGTATCATTATTCCTCTGGCTGAGTGCAGTTGTGTCCTCCTTTTTTTACTTTCAGGTATGAGAAGAATTTCCTTTTATTAAGTGACAGAATGGATCACATGATCTGTAATGTGGTGTATTTATGTGATTTACTAATCTCACATAGATGACCGCCTTTATGGAAAAACCGCTTATAGTTACTTCAGCCTCACTCCCAACCTTTTGACACTTTTGCAGAAAGTAACTGTTATTGCTGCTGCAGTAACAGATCCCACTGGTAGAAGAAGATTATTTGCACAGATCAATAGCTTCATTGCTATTTTTATCCTT-GCTGGACAGCTCACTTTGACGGTATGGTGTAGATGTATATAACATGCAAAAGTTCAGTCATGAAGCTAACCCTATTTCTCCATTTTGTGTGTCTGAGGGAAAGGGGGTTTGAGGGGATATTCAATTTCTCCAATTTGTGGAAGTGTATACAATCTACATGCTACTTGAACAACTCTAATTTAAAACTTCTCTTATCTACTCTCACATGTGATGGAGGTTCTGACTGGAGCCTGTGGTGAAGGCTTCTTCCTCTCCAAATATTCTTGTCTTTCGCATCAGTTTCCTTATCTGAGTTCCACCATAGAACATAAACTATTTCTATCACTTGGGGGTGTGAAAGAGTGTTAATATCTTGTTCGGTAATGTCAGCTCCTAGTGAGTTAGAAGTCTATTTTGAAGGATCTACAAAGAATTCCCATGTATGCAAGTCAGAGTAAGTAGAAATTTGAAGTGATAAGATATCTAGGACATTTTTTTAAGTTGATCAGTTTCCTATTTTCTTGAACTGCAGTTCCCTTTCTTTCTTTTATATTTCTCTACATACAAAACATGGTATCTCTAGTGTCACAAGTTTTAAAAGTCCTTATTCACCACTTGGTTGCAGGGGCGCATCCTTACTTTTGCTGGTGTTACTCTAGCCATTTGCTCCGCACCTTTTGTTGCCTTTGCGAATCTAATTGCTTTAGCAGTATGGCCCACATGGATTGCAGTGGCCATCTCAGAAACCCTGAGGAAGGTATATTTTCCTTGCATCCTTTTCTCAACCTCTAAAGAAATGTAATAAAAATAATGACGAGAAGTTGTAAAAGAGGAACACCATTCTGGCATTCGTACAATTTTTAGTTGGCAGAATACATTATTACCCGATAGACTTGGCACAATTTATTTAGAGCTTGTGTGGATTGACTTTTGGCTTATGACTTGTAGCCAAAAGTCACAAGTTCGAATTTTTTTTATTTTGGCTTATAAATAAGTGCTTATAAGCACTTATTTAGTTTACCCAAACACTACAAAAATCCTTAAAAGCTATTTTGGCTTAAAAACACCTAAAATAAGCTAATCCAAAATGGACACTTGGTCCACACCTAAACTTCCGGTAGTTCTCATTACCTGCTTCTCCCTATAGACCAATCTCACCTGATGGAGGTGAGACCCACGCGCTGCCATTTGGATTCTTTGTTGATGTGTCATTTTTTAAAAATAAAATTCTTTTTACAGTCTTTGAATTTTTGGATCATCTTTTTCGGGCCAAATTTGTAAAAGAGTTAGCAACTCCATTATTGAGGCGAACTTTTTTTTTTGACAGAATATAATGGATTGGACTGTGCATCCGATTTTTCTATTTCTGTATTGACCATGTACCAAGAAAGAAATGCATAGCATATATATATAAACATAATATATACTCTATTAGTTCAACTTTTTGGTATTTGTTTTCTAAAATCTAAAACCAAACCAAGAAACCAAAATTTCTAATCCGAAACCATACCAAAAAACCAAACTAAATAACAAAAAAAATTGGTTTGGTTTGATTTTTGAGTTAATCCAAATTATGCACACCCCTAATAGTAAACTCTTTATGGAATTGATAAGAAATATAAGTTGGAAACTAAAGTTCATTGCATCAAAAGAAAAGAAGAAATAAAATTAGCAAGCTGGAAATCACAACATATCTCTAGGGGTAGCTGGTTGACCTTGATTAATTATGTTCTTGATTCACTACCAATCTATATGATGTTAGTATTCCAAATTCCCAAGAGGGTAATCAATAAGTTAGATAAATGAGAGGAATATTCCTCTGGCAAGGAAACAGTGAGAATTAAGGCTACAACTTGGTTAAATGGGATGCTGTGATAGTGTGAAAGAAGCAATGGGGTTCGGGAATAAAGAACTTGATGAATTAGAGCGGAACCCTTAGGATAAAATGGCTGTGGAAGTTCATTTATGAAGAGCAGAGCTACTGGAAGGAAGTCATTAACACAAAATATGTTAAGAAGTCAACTGGATGACCAAAGAGGTGACTACACCATATGGGGCATTGTTTCGAGATGCATTAGATCTCTGTGGCATGAGTTTAATGCTAACACAAAGATCAAAGTGGGGATGGACAGAAAACAGAATTTTTGAAGGATGTTTGGCATGAAGCAGGTAGGCTATAGAGTTCCTTTCCTTCCATATTGCCCACCATATATTAGCTGTGATTTCTCCATTTGTCTCTGTTCTTGGATTGCTTTCCTGCTTCCTTGCAACTCTGGTTTGCTTCTGTGGTCTTGGCAGGCATGGTCCATGGCCTACCCTTAAGATTCAGGAATAACTTCCACTGTTGGCCAGTGATCTTGCAATTTAGAAAGAGATGCTTACCTGTCTCAGCAGTTCCCCCTCCCCCCCACACACACACACACAAAAAAAAAAAAATCTAGAACGTAATGGTATCCACCTCCTCTTTAAGTTGTCTCGAGTCCGTACAACTTCTTTGGCTCACAACCAGACAAAACAGGCAACTTTGAGTGGGATTTCTGACTTCCAGGTTCCACGCCAGTGACTGTGAGGCTGATGCTTAAAACTATCCTTCTGACCGCCTTTCCGCCACAAAAATGTCTTGATCCCCTTCCAGTCCATTAGATTGCTCAGTGGTGTTGAAAATATCTGCTACCCTCTTGGATCTCACAGTCATTAATTGTCTTCTAAAGATGAAGTTCCACCCTTGAGGAGTCCAAGGATCTACTATGGTCTTCTGCTGGTGGGATACTAGAGGATATATATTAAGATACAAGACCTAGAACTGTTGATAGTATAGAGAACAGTATGCAAGAAGTCAAGCTATATTGTTTTATGCTTCTACCTTTTTTTGGTGTAATCAGTTATACTCAAATGATACTATCTCCGTAATTGATGTACCAGACTCAATTTAGGAAAAGATAGTAGGATTTGAACTACGTGTAAATATTGACCAGTACAGTTTTAGTACTCTCTTTTGAGGAATATACAAAGTGACCAGTTTGAAAAAAAATAAAAAGAATTAGGATGTTGGTACTCTATTATATATTTATATTGTCTAAAGCTTTTATTATTGGCCAGAGATAATGAAGTTCTAGCCAAGTTTTTCTTTATAGATTTGTCCCGAAAAAGAAAAATTACATAGTTGAAATGAATAGACATCACATCTAAAGAAGCAACAAAAAGAAATACACAATTGCAACTTCATTATTTTGGCTAAAACTTTTTCTATTTGGCTAAAAATAATGAAATTTCAACTATGTTCTTCACAGTTTTGTCTTAAATAATGATACAAAATAGGAATAAATAGGTATTGAAGCCAAAGAAGAAATATACAGTTAGAACCCATTATTGTAGCTAAAACTTTTTATTTGGCTAAAAATAATGGTGTTCAGCCAATTTTTTACATTTTTTGTGTGAAGAAATACACAGTTTTCCTTCGAAAGGAGAAGAAGAAGTTCTAAGATGGGGTAAAATATGCCTTGTATATTATCAAGAAGCAACGAAAAGACCATTGGAACAAATAGACTATCTATGTGGCACTTAATGGTTGGAAAGTACCTCACTCGGAAGCTAATTTTTCAATTTTCTTTACTTCCATGCCCTTAGAAGAGAGTGTATCCACACTCTTTCCTGCATCACCATCCAAGGGGTCTAGGCTATCAAAAACCCAAGTATGCAATGGATAGTTAGAACAAAGAAAAGTTAAGGTGTACTGAATAAGCTGTGCCAACAGATGTTGTGACGAATAAAAGATAAGTAGGCGTAGGCATACACTTCTGCAATTGAGCCTCATATTTTTTGTCTTTTACGATAGGTGGTCACATACGTCGTTACCAGGCCTGCAAGGGAGCTTCTTTTCACTGTTGTCTCACAGGACGAGAAGTATAAAGCAAAGGTATTTACAAAAATAGTGACCTGAAAGATTATCATTGTTCCATCTTACATATTAGCAGCAGCTTGAATTGTGAATATCCTGTCTGTAGCAAATCTCGATTTCCTATTAAAATCTTTCTGAAAGGATATAGCAAAGCTAGTAGGTTAATATCATTTTATTAGGTCTGCACAAGTGTTTCATGACACTTGAAAGGATTGTTGTGGTTATAAGTGTCACTTGAATATCCCTAGCAGTAGAATGATTCTATTGTTACTTTTTGTGGTATTCCAATGTTTTTATGCAGGTATGCATAGATGTGATTGTTCAAAGACTTGGGGATGCTACAGCAGCTGCAATGTACAAGCTACTCTTCAGCACTC</genome_strand>
        <mrna_strand>ATTGATTATCCTTGGTGAGAGCTTAAATCATTAGATGAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAAGCTGATACCGATCAAGCTGAAGAGGCCGAGAATATACCAGGGCTCACACAGAGAACAACTTCCCCAAAATCTCCAGCTTCTGTAGCAAAGCCTCAGTTCTGGGCTATATTGGATGGGCTAAAGCTCATTCTTTCTTCGACTTACTTGTTGCACGTATCATTATTCCTTTGGCTGAGTGCAGTTGTGTCCTCCTTTTTTTACTTTCAG.................................................................................................................................................................AAAGTAACTGTTATTGCTGCTGCAGTGACAGATCCTGCTGGTAGAAGAAGATTATTTGCACAGATCAATAGTTTTATTGCTATTTTTATCCTTGGCTGGACAGCTCACTTTGACG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGCGCATCCTTACTTTTGCTGGTGTTACTCTAGCCATTTGCTCTGCACCTTTTGTTGCCTTTGCGAATCTAATTGCTTTAGCAGTATGGCCCACATGGATTGCAGTGGCCATCTCAGAAACCCTGAGGAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGTCACATACGTCGTTACCAGGCCTGCAAGGGAGCTTCTTTTCACTGTTGTCTCACAGGACGAGAAGTATAAAGCAAAG...........................................................................................................................................................................................................................................................................................GTATGCATAGATGTGATTGTTCAAAGACTTGGGGATGCTACAGCAGCTGCAATGTACAAGCTACTCTTCAGCACTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0067G18-NJACb/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E442808" ref_strand="+" ref_description="SGN-E442808 [cSTA-35-E13]">
      <seq>ggcaaacccaattagcgattcaaagagtcgcaataagcagatcttgacagtgagagctttgtgtgtatttgtattcgttgatcgagcatgagatgagatgattttggtgggcagagatcgaattgaggcatttgtttccattttcgttactcttcttcctcacgagctctccgcattgctttactcttcctccacttttttctttattttgagcgcatactttgtggttcttcctttacgtgatgaaggggctatatctttgggattggggaatctccccagcttgtttgtgggatccttgatactcacactctttgctgcccctctttccacgttaatcttttcattgcctaatctttccaagtcaaaggctttggtcttgatacacaggttttttggggtcacacttgttgcgttctacatcctgtggctattttctactcctgggagttcaccatttaatatcaagggactgctctctgtgtcctcaactttaaaacaggagttaaaagtggaggtgagtcacacgaatactccaaactcgtcgagttggagcaaccatggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0067G18-NJACb/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0067G18.1" temp_strand="-" temp_description="C06SLm0067G18.1  AC216664.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0067G18 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="63033" stop="60997"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62778" g_stop="62575" g_length="204"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="205" r_length="205" r_score="0.863"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="62574" i_stop="62498" i_length="77">
            <donor d_prob="0.999" d_score="0.94"/>
            <acceptor a_prob="0.994" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="62497" g_stop="62333" g_length="165"/>
          <reference_exon_boundary r_type="cDNA" r_start="206" r_stop="370" r_length="165" r_score="0.970"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="62332" i_stop="61569" i_length="764">
            <donor d_prob="0.999" d_score="0.94"/>
            <acceptor a_prob="0.962" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="61568" g_stop="61470" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="371" r_stop="469" r_length="99" r_score="0.990"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="61469" i_stop="61392" i_length="78">
            <donor d_prob="0.965" d_score="0.98"/>
            <acceptor a_prob="0.967" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="61391" g_stop="61296" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="470" r_stop="565" r_length="96" r_score="0.969"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0067G18.1" gen_strand="-" ref_id="SGN-E442808" ref_strand="+">
        <total_alignment_score>0.934</total_alignment_score>
        <cumulative_length_of_scored_exons>564</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0067G18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E442808" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="62778" e_stop="62575"/>
          <exon e_start="62497" e_stop="62333"/>
          <exon e_start="61568" e_stop="61470"/>
          <exon e_start="61391" e_stop="61296"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGAAACCCAATTAGCCATTCAAAGAGTGGCAAAATGCAGATCTTG--TGAGATTTTTGTGTGTTTGTATTCATTCGTTGATCGAGCATGAGATAGAGATGAATTTGTTGGGCAGAGATCGAATTGAGGCATTTGTTTCCATTTTCGTTACTCTTCTTCCTCACGAGCTCTCAGCATTGCTATACTCTTCCTCCACTTTTTTCTTCGTAAGTATCCATTCAATTTCCCCCCATCATAAACATCTTCTTCGCGTTCTTTGATATGAATTTAATGATATATGCAGATTTTGAGCGCATACTTTGTGGTTCTTCCTTTACGTGATGAAGGAGCTATATCTTTGGGATTGGGGAATCTCCCCAGCTTGTTTGTGGGATCTTTGATACTCACACTCTTTGCTGCACCTCTTTCCACCTTAATCTTTTCATTGCCTAATCTTTCAAAGTCAAAGGTAACTCAATAATTCCTTCTTTTATTGCTGTATTAGATTTATTGTCTTTTTACACAAGTGGAGGAGGAGAATCATAGTTAAAAAGTTCTTCATGTGAAATGATATTGTCTAAGTAGAGTAGGAGAATCATAGTTAAAAAGTTCTTCATAGGATATAATATTGTTGAAACCAAGTTTAACACTTCTTTTCAGACTATATTTGATACTTCCAGTGGAATTAATTTACATTAAGTGCTAGTTTTAGACCCTGTTGGAGTTCTAAGTTTAGGCTTTTAACAAAGCCTACAATCTATTCCGCATTTGCATTTGAAATAACTCCTCCATGCCCCCGTTCAGTATTAAGCATGAAATAGTTGTCTTTTGATGATTTCTGTTTGACCTCAATAGAGTGTTGTATTATACCTGTGAAATTGTTGTTTTATTTATGTATTTGGTAAATGATGATTTCGTTGGTGTCATTTGAGAGTAATATTGAATTTTTCCGTGACTCTGAATTATCTGGCTATGTTAATAATGATTCATGAGAAGAAAGAAATTGCAAATCTTGATACTCTACAGCATAAGGATATCAAATTATAGATACTCTTTTTGTTGTCTAATGCAATGAATTAGGTTCAGCAACTTATAGACACTCTTTTTGTTGTTGGATGCTATGAATTGGGTTCAGCTACTTGCGGTGAGACCAATTTGGAGTGTTAGAAGCTGATTAGGTTTGTTTGGGTCTTTTTAAATGTCATCTGTAATGGTCCCTTCTTTAAATTCCAGGCTTTGGTCTTGATACACAGGTTTTTTGGGGTCACACTTGTTGCGTTCTACATCCTGTGGCTTTTTTCTACTCCTGGGAGTTCACCATTTAATATCAAGGTACAAACAACTTCATGATTCTGGAAGCAAATCTTTTGACAATGCAAATGTTATAATTAAAAAATGGCAATAATGCAGGGACTGCTCTCTGTGTCCTCAACTTTAAAACAGGAGTTAAAAGTGGAGGTTAGTCACACGAATACTCCAAACTTGTCGAGTTGGAGCAACCATGGT</genome_strand>
        <mrna_strand>GGCAAACCCAATTAGCGATTCAAAGAGTCGCAATAAGCAGATCTTGACAGTGAGAGCTTTGTGTGTATTTGTATTCGTTGATCGAGCATGAGAT-GAGATGATTTTGGTGGGCAGAGATCGAATTGAGGCATTTGTTTCCATTTTCGTTACTCTTCTTCCTCACGAGCTCTCCGCATTGCTTTACTCTTCCTCCACTTTTTTCTTT.............................................................................ATTTTGAGCGCATACTTTGTGGTTCTTCCTTTACGTGATGAAGGGGCTATATCTTTGGGATTGGGGAATCTCCCCAGCTTGTTTGTGGGATCCTTGATACTCACACTCTTTGCTGCCCCTCTTTCCACGTTAATCTTTTCATTGCCTAATCTTTCCAAGTCAAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTTGGTCTTGATACACAGGTTTTTTGGGGTCACACTTGTTGCGTTCTACATCCTGTGGCTATTTTCTACTCCTGGGAGTTCACCATTTAATATCAAG..............................................................................GGACTGCTCTCTGTGTCCTCAACTTTAAAACAGGAGTTAAAAGTGGAGGTGAGTCACACGAATACTCCAAACTCGTCGAGTTGGAGCAACCATGGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0067G18-NJACb/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E232729" ref_strand="+" ref_description="SGN-E232729 [cLED-8-K19]">
      <seq>taagctccatagaactcacttatggattacattggatatgatgtcgttattgtattttttttaattcgtttcaattattaatttaattgaatatgcaattttcaaattttagtagtatttttgaggcaaagactcggctttattggagtaagcccctaatccgattgaagttgaaattttcagttagtgataagtgaaaaaaagtattttgatattgaagttgagtgcttagtatcaacagatttaggattttaaaccgagcttttttggatagtgacgatagagattcacatatgatagaggaagacatgttatgaagttgatgagtagcaaatattatactttgtttacatgagaagtgagtttctcatatgaactatgctttcggagaaacataatgagagagattgaattttctctaggttcaacattgcgaatggtct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0067G18-NJACb/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0067G18.1" temp_strand="+" temp_description="C06SLm0067G18.1  AC216664.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0067G18 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="79826" stop="80868"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="80126" g_stop="80568" g_length="443"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="443" r_length="443" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0067G18.1" gen_strand="+" ref_id="SGN-E232729" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>443</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0067G18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E232729" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="80126" e_stop="80568"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAAGCTCCATAGAACTCACTTATGGATTACATTGGATATGATGTCGTTATTGTATTTTTTTTAATTCGTTTCAATTATTAATTTAATTGAATATGCAATTTTCAAATTTTAGTAGTATTTTTGAGGCAAAGACTCGGCTTTATTGGAGTAAGCCCCTAATCCGATTGAAGTTGAAATTTTCAGTTAGTGATAAGTGAAAAAAAGTATTTTGATATTGAAGTTGAGTGCTTAGTATCAACAGATTTAGGATTTTAAACCGAGCTTTTTTGGATAGTGACGATAGAGATTCACATATGATAGAGGAAGACATGTTATGAAGTTGATGAGTAGCAAATATTATACTTTGTTTACATGAGAAGTGAGTTTCTCATATGAACTATGCTTTCGGAGAAACATAATGAGAGAGATTGAATTTTCTCTAGGTTCAACATTGCGAATGGTCT</genome_strand>
        <mrna_strand>TAAGCTCCATAGAACTCACTTATGGATTACATTGGATATGATGTCGTTATTGTATTTTTTTTAATTCGTTTCAATTATTAATTTAATTGAATATGCAATTTTCAAATTTTAGTAGTATTTTTGAGGCAAAGACTCGGCTTTATTGGAGTAAGCCCCTAATCCGATTGAAGTTGAAATTTTCAGTTAGTGATAAGTGAAAAAAAGTATTTTGATATTGAAGTTGAGTGCTTAGTATCAACAGATTTAGGATTTTAAACCGAGCTTTTTTGGATAGTGACGATAGAGATTCACATATGATAGAGGAAGACATGTTATGAAGTTGATGAGTAGCAAATATTATACTTTGTTTACATGAGAAGTGAGTTTCTCATATGAACTATGCTTTCGGAGAAACATAATGAGAGAGATTGAATTTTCTCTAGGTTCAACATTGCGAATGGTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0067G18-NJACb/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E249164" ref_strand="-" ref_description="SGN-E249164 [cLEF-50-G23]">
      <seq>attggagtaagcccctaatccgattgaagttgaaattttcagttagtgataagtgaaaaaaagtattttgatattgaagttgagtgcttagtatcaacagatttaggattttaaaccgagcttttttggatagtgacgatagagattcacatatgatagaggaagacatgttatgaagttgatgagtagcaaatattatactttgtttacatgagaagtgagtttctcatatgaactatgctttcggagaaacataatgagagagattgaattttctctaggttcaacattgcgaatggtctgcttatggcttggtatgtggtgtcacaatgatatttttctagaactctgaggtctttgaagaaataagaagatcgttaatcttgggttaattatctatatgattatcgacgagatgacatgtgattcttccaagttttgaggatgaacaagtatggcttagaacaagcagtagctggaggagttggatttcaacaacaaagagatgaacgaggagttgctcaagaagaataacgacaacattagatcatgatatattgcagacccttaagtttataaagagttgatttagttttttggattttctttcaattaacgcaggataaaaaggaaaaaatcttattcccatcaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0067G18-NJACb/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0067G18.1" temp_strand="+" temp_description="C06SLm0067G18.1  AC216664.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0067G18 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="79967" stop="81312"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="80267" g_stop="80753" g_length="487"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="487" r_length="487" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="80754" i_stop="80854" i_length="101">
            <donor d_prob="0.949" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="80855" g_stop="81026" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="488" r_stop="659" r_length="172" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0067G18.1" gen_strand="+" ref_id="SGN-E249164" ref_strand="-">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>659</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0067G18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E249164" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="80267" e_stop="80753"/>
          <exon e_start="80855" e_stop="81026"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTGGAGTAAGCCCCTAATCCGATTGAAGTTGAAATTTTCAGTTAGTGATAAGTGAAAAAAAGTATTTTGATATTGAAGTTGAGTGCTTAGTATCAACAGATTTAGGATTTTAAACCGAGCTTTTTTGGATAGTGACGATAGAGATTCACATATGATAGAGGAAGACATGTTATGAAGTTGATGAGTAGCAAATATTATACTTTGTTTACATGAGAAGTGAGTTTCTCATATGAACTATGCTTTCGGAGAAACATAATGAGAGAGATTGAATTTTCTCTAGGTTCAACATTGCGAATGGTCTGCTTATGGCTTGGTATGTGGTGTCACAATGATATTTTTCTAGAACTCTGAGGTCTTTGAAGAAATAAGAAGATCGTTAATCTTGGGTTAATTATCTATATGATTATCGACGAGATGACATGTGATTCTTCCAAGTTTTGAGGATGAACAAGTATGGCTTAGAACAAGCAGTAGCTGGAGGAGTTGGTAAGTGAATGCGGTGGTCATTAATAATTAATTAGCGTTGACATTAATTTCTACCTTCCTTTTCCACACATTAAGCAACATTTTATATTTTTTCTCTGCAGGATTTCAACAACAAAGAGATGAACGAGGAGTTGCTCAAGAAGAATAACGACAACATTAGATCATGATATATTGCAGACCCTTAAGTTTATAAAGAGTTGATTTAGTTTTTTGGATTTTCTTTCAATTAACGCAGGATAAAAAGGAAAAAATCTTATTCNNNNNNNNNNNNNN</genome_strand>
        <mrna_strand>ATTGGAGTAAGCCCCTAATCCGATTGAAGTTGAAATTTTCAGTTAGTGATAAGTGAAAAAAAGTATTTTGATATTGAAGTTGAGTGCTTAGTATCAACAGATTTAGGATTTTAAACCGAGCTTTTTTGGATAGTGACGATAGAGATTCACATATGATAGAGGAAGACATGTTATGAAGTTGATGAGTAGCAAATATTATACTTTGTTTACATGAGAAGTGAGTTTCTCATATGAACTATGCTTTCGGAGAAACATAATGAGAGAGATTGAATTTTCTCTAGGTTCAACATTGCGAATGGTCTGCTTATGGCTTGGTATGTGGTGTCACAATGATATTTTTCTAGAACTCTGAGGTCTTTGAAGAAATAAGAAGATCGTTAATCTTGGGTTAATTATCTATATGATTATCGACGAGATGACATGTGATTCTTCCAAGTTTTGAGGATGAACAAGTATGGCTTAGAACAAGCAGTAGCTGGAGGAGTTG.....................................................................................................GATTTCAACAACAAAGAGATGAACGAGGAGTTGCTCAAGAAGAATAACGACAACATTAGATCATGATATATTGCAGACCCTTAAGTTTATAAAGAGTTGATTTAGTTTTTTGGATTTTCTTTCAATTAACGCAGGATAAAAAGGAAAAAATCTTATTCCCATCAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0067G18-NJACb/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E623285" ref_strand="-" ref_description="SGN-E623285 [88375]">
      <seq>gtctgtttatggtcatcgtcctaatctgcactcaagaacctttaccgttcacacattgtgtacctttaacagtggattaccctaaccaaattcctcttgcccccaaaaaaattatcaaactaataggctggcatcagggatactgcaacttgctgaaggttctcatttaactattgacgagatctcaattacaagaagggagacttaatcctattgggcttgagaatgcaagagtcctgcaaagcttgttggaacagcaaaaggttgaatatgacttcacttattataaaatggacatgcctgcggacattcagttgctagttctttctgaggggaaatccaacatactcccagcagatttggttttaccatttcgaccattgtcagtagatgctgctcaagatgttgagatagaagttctgcaatcttggagatggtacctggctactatgagatcgttgtctcactctattacgcaagagatgcagaaggtggtagaagatgacttagtagcggcaaggcaggctgatagaagcttaggtagcctagatttcagcaggtttctgacaatgggtcgtcttgtatctctaagttttggtgaaaccactttaaccttagaacattggcaaatggccaaagaattagagcgcctccgaaaggagagattatagggcagtttgtaaagcagtttcttcactttgtataaaagatgatgtgcctaatccttccagttttgctggtagagtggactgatgttctgcttagcatttctccaatattatgtactcgtatcagtataaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0067G18-NJACb/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0067G18.1" temp_strand="-" temp_description="C06SLm0067G18.1  AC216664.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0067G18 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="83134" stop="81177"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82834" g_stop="82706" g_length="129"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="126" r_length="126" r_score="0.922"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82705" i_stop="82612" i_length="94">
            <donor d_prob="0.745" d_score="0.94"/>
            <acceptor a_prob="0.000" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82611" g_stop="82495" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="127" r_stop="244" r_length="118" r_score="0.889"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="82494" i_stop="82321" i_length="174">
            <donor d_prob="0.000" d_score="0.90"/>
            <acceptor a_prob="0.000" a_score="0.72"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="82320" g_stop="82072" g_length="249"/>
          <reference_exon_boundary r_type="cDNA" r_start="245" r_stop="491" r_length="247" r_score="0.880"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="82071" i_stop="81817" i_length="255">
            <donor d_prob="0.982" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="81816" g_stop="81749" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="492" r_stop="559" r_length="68" r_score="0.956"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="81748" i_stop="81666" i_length="83">
            <donor d_prob="0.922" d_score="0.94"/>
            <acceptor a_prob="0.919" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="81665" g_stop="81453" g_length="213"/>
          <reference_exon_boundary r_type="cDNA" r_start="560" r_stop="769" r_length="210" r_score="0.920"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="797" polyA_stop="813"/>
      <MATCH_line gen_id="C06SLm0067G18.1" gen_strand="-" ref_id="SGN-E623285" ref_strand="-">
        <total_alignment_score>0.906</total_alignment_score>
        <cumulative_length_of_scored_exons>776</cumulative_length_of_scored_exons>
        <coverage percentage="0.954" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0067G18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E623285" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="82834" e_stop="82706"/>
          <exon e_start="82611" e_stop="82495"/>
          <exon e_start="82320" e_stop="82072"/>
          <exon e_start="81816" e_stop="81749"/>
          <exon e_start="81665" e_stop="81453"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCTGTTTATGGTCATCGTCTTAATCTTGCACTAAAAAACCTTCTACCGTTCACACAATGTTTACCTTTAACAGTGGATTACCGTAACAAAATTCCTCTTGCCCCCCAAAAAAATTATCAAACTAATAGGTCAGCAGTTCAGTATGATTAACCAGATTTACTGATTTTTATGTTCAGTTGATATGTCACGGTCAGTCCTGTAACTTTGTGGTGAATGCTTCATGCAGGCATCAGGGTTACTGCAACTTGTTGAAGGCTCTCATTTAACTATTGATGAGA-CTCAATCACAAGAAGAAAGACTTAATCCTATTGGGTTTGAGAATGCCAGAGTCCTGCAACGGCAAAAGGTAATAATGGATTGACGAACTGCAAATATCCTTTCTCTTGTGTCCGTTATTGGAAGCCAGTTATATATGTTAAAGTGAGATAATAATATAGTATGATAATATCATCTGGTTAAAATTATTCATGCAGGTGAAGTTTATACATAGTTGCTTTCATAACTATGAGTCCTCTTCTAGCCATTTTTTGTTAGGTTGAATATGACTTCACTTGTTATAAAATGGACATGCTTGTGGACATTCAGTTGCTAGTTCTTTCTGAGGGAAAATCCAATATACTCCCAACAAATTTGGTTTTACCATTTAGTTCATTATCACTAGATGTTGCTCAAGTTATTAAGATAGAAGTTCTGCAATCTTGGAGATGGTACCTGGCTACTATGAGATCATTGTCTCACTCTATTACGCAAGAGATGCAGAAGGTTAGAGTTTATGATTGACATCTCAGAAGATTAGTTTAAAAATTTTCAGGAAACTCTCAATGTGGGGTTACGATAAAATGGTCATCTTAGATATGTATGAACATTGTGTTACCCTGCTTATGATAAATGATTATTAACAACCACTTCTTGGTAAAAGTCCCTTTGAAACTCTTATGCTTATTATTTGTGATCCAGAGTGGTGATTGCAAATCTTCCAAAGTTGTTTTGACTAATTATTGATTTGCCATATCACAGGTGGTAGAAGATGACTTAGTAGCGGCTAGGTAGGCTGATAGAAGCTTACGTAGCCTAGATTTCAGCAGGTCAGTTGCAGTATTAGTTGAATTAATTTGGTGTTTCATGCCATATCAGTGGTTGTATTGAAGCCAGTGTTTTTGTTCTGTAGGTTTCTGACAATGGGTCGTCTTATATCTCTAAGTTTTGGTGAAACCGCTTTAACACTTGAATATTGGCAAATGGCTAAAGAATTAGAGCGCCTCCGAATAGAGAGATTATAGGGCAGTTTGTAAAGCAGTTTCTTCACTTTGTATAAAAGATGATGTGCCTAATCCTGCAAGTTTTGCTGATAGAGTAGTGGACTGTTGTTCTGCTTAGCACT</genome_strand>
        <mrna_strand>GTCTGTTTATGGTCATCGTCCTAATC-TGCACTCAAGAACCTT-TACCGTTCACACATTGTGTACCTTTAACAGTGGATTACCCTAACCAAATTCCTCTTG-CCCCCAAAAAAATTATCAAACTAATAG..............................................................................................GCTGGCATCAGGGATACTGCAACTTGCTGAAGGTTCTCATTTAACTATTGACGAGATCTCAATTACAAGAAGGGAGACTTAATCCTATTGGGCTTGAGAATGCAAGAGTCCTGCAAAG..............................................................................................................................................................................CTTGTTG-GA-ACAGCAAAAGGTTGAATATGACTTCACTTATTATAAAATGGACATGCCTGCGGACATTCAGTTGCTAGTTCTTTCTGAGGGGAAATCCAACATACTCCCAGCAGATTTGGTTTTACCATTTCGACCATTGTCAGTAGATGCTGCTCAAGATGTTGAGATAGAAGTTCTGCAATCTTGGAGATGGTACCTGGCTACTATGAGATCGTTGTCTCACTCTATTACGCAAGAGATGCAGAAG...............................................................................................................................................................................................................................................................GTGGTAGAAGATGACTTAGTAGCGGCAAGGCAGGCTGATAGAAGCTTAGGTAGCCTAGATTTCAGCAG...................................................................................GTTTCTGACAATGGGTCGTCTTGTATCTCTAAGTTTTGGTGAAACCACTTTAACCTTAGAACATTGGCAAATGGCCAAAGAATTAGAGCGCCTCCGAAAGGAGAGATTATAGGGCAGTTTGTAAAGCAGTTTCTTCACTTTGTATAAAAGATGATGTGCCTAATCCTTCCAGTTTTGCTGGT--AG-AGTGGACTGATGTTCTGCTTAGCATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0067G18-NJACb/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E357257" ref_strand="-" ref_description="SGN-E357257 [cLHT-17-L10]">
      <seq>gacttaatcctattgggcttgagaatgtcagagtcctgcaaagcttgttagaacgacaaaaggttgaatatgacttcacttattataaaatggacatgcctacggacattcaattgctacttcattctgagggaaaatccaatatattcccagcagatttgattttaccatttcgtccattatcagtagatgctgctcaagttgttgagatagaagttctgcaatcttggagatggtacctggctactatgagatcattgtctcgctatattacgcaagagatgcagaaggtggtagaagatgacttagtagcagctaggcaggctgatagaagcttaggtagcctagatttcagcaggattctgacaatgggtcgtcttgtatctctaagttttggtgaaaccactttaacactcgaacattggcaaatggccaaagaattagagcgccttcgaaaggagagattatagggcagtttgtaaaagcagtttcatcactttgtataaaagatgatgtgcataatcctgcaagttttgctggtagagtagtggactgttgttctgcttagcagttctctaatattatgtactcgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0067G18-NJACb/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0067G18.1" temp_strand="-" temp_description="C06SLm0067G18.1  AC216664.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0067G18 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="82837" stop="81138"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82537" g_stop="82488" g_length="50"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="49" r_length="49" r_score="0.820"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82487" i_stop="82314" i_length="174">
            <donor d_prob="0.991" d_score="0.82"/>
            <acceptor a_prob="0.000" a_score="0.76"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82313" g_stop="82072" g_length="242"/>
          <reference_exon_boundary r_type="cDNA" r_start="50" r_stop="290" r_length="241" r_score="0.876"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="82071" i_stop="81817" i_length="255">
            <donor d_prob="0.982" d_score="0.96"/>
            <acceptor a_prob="0.999" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="81816" g_stop="81749" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="291" r_stop="358" r_length="68" r_score="0.956"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="81748" i_stop="81666" i_length="83">
            <donor d_prob="0.922" d_score="0.94"/>
            <acceptor a_prob="0.919" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="81665" g_stop="81453" g_length="213"/>
          <reference_exon_boundary r_type="cDNA" r_start="359" r_stop="572" r_length="214" r_score="0.930"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0067G18.1" gen_strand="-" ref_id="SGN-E357257" ref_strand="-">
        <total_alignment_score>0.901</total_alignment_score>
        <cumulative_length_of_scored_exons>573</cumulative_length_of_scored_exons>
        <coverage percentage="0.966" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0067G18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E357257" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="82537" e_stop="82488"/>
          <exon e_start="82313" e_stop="82072"/>
          <exon e_start="81816" e_stop="81749"/>
          <exon e_start="81665" e_stop="81453"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GACTTAATCCTATTGGGTTTGAGAATGCCAGAGTCCTGCAACGGCAAAAGGTAATAATGGATTGACGAACTGCAAATATCCTTTCTCTTGTGTCCGTTATTGGAAGCCAGTTATATATGTTAAAGTGAGATAATAATATAGTATGATAATATCATCTGGTTAAAATTATTCATGCAGGTGAAGTTTATACATAGTTGCTTTCATAACTATGAGTCCTCTTCTAGCCATTTTTTGTTAGGTTGAATATGACTTCACTTGTTATAAAATGGACATGCTTGTGGACATTCAGTTGCTAGTTCTTTCTGAGGGAAAATCCAATATACTCCCAACAAATTTGGTTTTACCATTTAGTTCATTATCACTAGATGTTGCTCAAGTTATTAAGATAGAAGTTCTGCAATCTTGGAGATGGTACCTGGCTACTATGAGATCATTGTCTCACTCTATTACGCAAGAGATGCAGAAGGTTAGAGTTTATGATTGACATCTCAGAAGATTAGTTTAAAAATTTTCAGGAAACTCTCAATGTGGGGTTACGATAAAATGGTCATCTTAGATATGTATGAACATTGTGTTACCCTGCTTATGATAAATGATTATTAACAACCACTTCTTGGTAAAAGTCCCTTTGAAACTCTTATGCTTATTATTTGTGATCCAGAGTGGTGATTGCAAATCTTCCAAAGTTGTTTTGACTAATTATTGATTTGCCATATCACAGGTGGTAGAAGATGACTTAGTAGCGGCTAGGTAGGCTGATAGAAGCTTACGTAGCCTAGATTTCAGCAGGTCAGTTGCAGTATTAGTTGAATTAATTTGGTGTTTCATGCCATATCAGTGGTTGTATTGAAGCCAGTGTTTTTGTTCTGTAGGTTTCTGACAATGGGTCGTCTTATATCTCTAAGTTTTGGTGAAACCGCTTTAACACTTGAATATTGGCAAATGGCTAAAGAATTAGAGCGCCTCCGAATAGAGAGATTATAGGGCAGTTTGT-AAAGCAGTTTCTTCACTTTGTATAAAAGATGATGTGCCTAATCCTGCAAGTTTTGCTGATAGAGTAGTGGACTGTTGTTCTGCTTAGCACT</genome_strand>
        <mrna_strand>GACTTAATCCTATTGGGCTTGAGAATGTCAGAGTCCTGCAA-AGCTTGTT..............................................................................................................................................................................AGA-ACGACAAAAGGTTGAATATGACTTCACTTATTATAAAATGGACATGCCTACGGACATTCAATTGCTACTTCATTCTGAGGGAAAATCCAATATATTCCCAGCAGATTTGATTTTACCATTTCGTCCATTATCAGTAGATGCTGCTCAAGTTGTTGAGATAGAAGTTCTGCAATCTTGGAGATGGTACCTGGCTACTATGAGATCATTGTCTCGCTATATTACGCAAGAGATGCAGAAG...............................................................................................................................................................................................................................................................GTGGTAGAAGATGACTTAGTAGCAGCTAGGCAGGCTGATAGAAGCTTAGGTAGCCTAGATTTCAGCAG...................................................................................GATTCTGACAATGGGTCGTCTTGTATCTCTAAGTTTTGGTGAAACCACTTTAACACTCGAACATTGGCAAATGGCCAAAGAATTAGAGCGCCTTCGAAAGGAGAGATTATAGGGCAGTTTGTAAAAGCAGTTTCATCACTTTGTATAAAAGATGATGTGCATAATCCTGCAAGTTTTGCTGGTAGAGTAGTGGACTGTTGTTCTGCTTAGCAGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0067G18-NJACb/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E546078" ref_strand="-" ref_description="SGN-E546078 [TUS-69-E3]">
      <seq>aaaatggacatgcctacggacattcaattgctacttcattctgagggaaaatccaatatattcccagcagatttgattttaccatttcgtccattatcagtagatgctgctcaagttgttgagatagaagttctgcaatcttggagatggtacctggctactatgagatcattgtctcactatattacgcaagagatgcagaaggtggtagaagatgacttagtagcagctaggcaggctgatagaagcttaggtagcctagatttcagcaggattctgacaatgggtcgtcttgtatctctaagttttggtgaaaccactttaacactcgaacattggcaaatggccaaagaattagagcgccttcgaaaggagagattatagggcagtttgtaaaagcagtttcatcactttgtataaaagatgatgtgcataatcctgcaagttttgctggtagagtagtggactgttgttctgcttagcagttctctaatattatgtactcgta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0067G18-NJACb/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06SLm0067G18.1" temp_strand="-" temp_description="C06SLm0067G18.1  AC216664.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0067G18 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="82575" stop="81138"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82275" g_stop="82072" g_length="204"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="204" r_length="204" r_score="0.917"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82071" i_stop="81817" i_length="255">
            <donor d_prob="0.982" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81816" g_stop="81749" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="205" r_stop="272" r_length="68" r_score="0.956"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="81748" i_stop="81666" i_length="83">
            <donor d_prob="0.922" d_score="0.94"/>
            <acceptor a_prob="0.919" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="81665" g_stop="81453" g_length="213"/>
          <reference_exon_boundary r_type="cDNA" r_start="273" r_stop="486" r_length="214" r_score="0.930"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0067G18.1" gen_strand="-" ref_id="SGN-E546078" ref_strand="-">
        <total_alignment_score>0.928</total_alignment_score>
        <cumulative_length_of_scored_exons>485</cumulative_length_of_scored_exons>
        <coverage percentage="0.955" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0067G18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E546078" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="82275" e_stop="82072"/>
          <exon e_start="81816" e_stop="81749"/>
          <exon e_start="81665" e_stop="81453"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAATGGACATGCTTGTGGACATTCAGTTGCTAGTTCTTTCTGAGGGAAAATCCAATATACTCCCAACAAATTTGGTTTTACCATTTAGTTCATTATCACTAGATGTTGCTCAAGTTATTAAGATAGAAGTTCTGCAATCTTGGAGATGGTACCTGGCTACTATGAGATCATTGTCTCACTCTATTACGCAAGAGATGCAGAAGGTTAGAGTTTATGATTGACATCTCAGAAGATTAGTTTAAAAATTTTCAGGAAACTCTCAATGTGGGGTTACGATAAAATGGTCATCTTAGATATGTATGAACATTGTGTTACCCTGCTTATGATAAATGATTATTAACAACCACTTCTTGGTAAAAGTCCCTTTGAAACTCTTATGCTTATTATTTGTGATCCAGAGTGGTGATTGCAAATCTTCCAAAGTTGTTTTGACTAATTATTGATTTGCCATATCACAGGTGGTAGAAGATGACTTAGTAGCGGCTAGGTAGGCTGATAGAAGCTTACGTAGCCTAGATTTCAGCAGGTCAGTTGCAGTATTAGTTGAATTAATTTGGTGTTTCATGCCATATCAGTGGTTGTATTGAAGCCAGTGTTTTTGTTCTGTAGGTTTCTGACAATGGGTCGTCTTATATCTCTAAGTTTTGGTGAAACCGCTTTAACACTTGAATATTGGCAAATGGCTAAAGAATTAGAGCGCCTCCGAATAGAGAGATTATAGGGCAGTTTGT-AAAGCAGTTTCTTCACTTTGTATAAAAGATGATGTGCCTAATCCTGCAAGTTTTGCTGATAGAGTAGTGGACTGTTGTTCTGCTTAGCACT</genome_strand>
        <mrna_strand>AAAATGGACATGCCTACGGACATTCAATTGCTACTTCATTCTGAGGGAAAATCCAATATATTCCCAGCAGATTTGATTTTACCATTTCGTCCATTATCAGTAGATGCTGCTCAAGTTGTTGAGATAGAAGTTCTGCAATCTTGGAGATGGTACCTGGCTACTATGAGATCATTGTCTCACTATATTACGCAAGAGATGCAGAAG...............................................................................................................................................................................................................................................................GTGGTAGAAGATGACTTAGTAGCAGCTAGGCAGGCTGATAGAAGCTTAGGTAGCCTAGATTTCAGCAG...................................................................................GATTCTGACAATGGGTCGTCTTGTATCTCTAAGTTTTGGTGAAACCACTTTAACACTCGAACATTGGCAAATGGCCAAAGAATTAGAGCGCCTTCGAAAGGAGAGATTATAGGGCAGTTTGTAAAAGCAGTTTCATCACTTTGTATAAAAGATGATGTGCATAATCCTGCAAGTTTTGCTGGTAGAGTAGTGGACTGTTGTTCTGCTTAGCAGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>48</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="-" PGL_start="4239" PGL_stop="2868"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="4239" e_stop="4076"/>
            <exon e_start="3991" e_stop="3878"/>
            <exon e_start="3790" e_stop="3677"/>
            <exon e_start="3445" e_stop="3314"/>
            <exon e_start="3198" e_stop="3154"/>
            <exon e_start="2971" e_stop="2868"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.905" acc_prob="0.997" e_score="0.890"/>
          <exon-intron don_prob="0.995" acc_prob="0.948" e_score="0.921"/>
          <exon-intron don_prob="0.983" acc_prob="0.947" e_score="0.939"/>
          <exon-intron don_prob="0.987" acc_prob="0.981" e_score="0.902"/>
          <exon-intron don_prob="0.957" acc_prob="0.000" e_score="0.956"/>
          <exon-only e_score="0.942"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.890">
            <gDNA_exon_boundary e_start="4239" e_stop="4076" e_length="164"/>
          </exon>
          <intron i_serial="1" don_prob="0.905" acc_prob="0.997">
            <gDNA_intron_boundary i_start="4075" i_stop="3992" i_length="84"/>
          </intron>
          <exon e_serial="2" e_score="0.921">
            <gDNA_exon_boundary e_start="3991" e_stop="3878" e_length="114"/>
          </exon>
          <intron i_serial="2" don_prob="0.995" acc_prob="0.948">
            <gDNA_intron_boundary i_start="3877" i_stop="3791" i_length="87"/>
          </intron>
          <exon e_serial="3" e_score="0.939">
            <gDNA_exon_boundary e_start="3790" e_stop="3677" e_length="114"/>
          </exon>
          <intron i_serial="3" don_prob="0.983" acc_prob="0.947">
            <gDNA_intron_boundary i_start="3676" i_stop="3446" i_length="231"/>
          </intron>
          <exon e_serial="4" e_score="0.902">
            <gDNA_exon_boundary e_start="3445" e_stop="3314" e_length="132"/>
          </exon>
          <intron i_serial="4" don_prob="0.987" acc_prob="0.981">
            <gDNA_intron_boundary i_start="3313" i_stop="3199" i_length="115"/>
          </intron>
          <exon e_serial="5" e_score="0.956">
            <gDNA_exon_boundary e_start="3198" e_stop="3154" e_length="45"/>
          </exon>
          <intron i_serial="5" don_prob="0.957" acc_prob="0.000">
            <gDNA_intron_boundary i_start="3153" i_stop="2972" i_length="182"/>
          </intron>
          <exon e_serial="6" e_score="0.942">
            <gDNA_exon_boundary e_start="2971" e_stop="2868" e_length="104"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="4239" stop="4076"/>
              <exon start="3991" stop="3878"/>
              <exon start="3790" stop="3677"/>
              <exon start="3445" stop="3314"/>
              <exon start="3198" stop="3154"/>
              <exon start="2971" stop="2868"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E453707" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="4239" stop="4076"/>
              <exon start="3991" stop="3878"/>
              <exon start="3790" stop="3677"/>
              <exon start="3445" stop="3314"/>
              <exon start="3198" stop="3154"/>
              <exon start="2971" stop="2911"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E425016" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GATGGGACTCGCTTACGATTGCCTACTAAATCCACAGAGAGCTATCCGAATGACATTTCAAAATGAGATTCTAAAGCCTCTGATCCAGCCGCCTTCGACGGCAAGGACTGGGGCGCTATTGATCTATTCAGGAAGTTTCTCTATGACGATGGCGGCCTTTCTCA : GTTCGAGTTCTGAATCCTGCATCTATAGCACGATTGAAATCCAATAATCTTGTTCGATTTCGGGGAATGATTCAAGATATGCTTGGAAATGAATTGTATGTTGGCATGTACAAG : GATGGAGAAACTTGGAGAACGAATAAGTTTGGTGAATTCTTTCAATTACCTATGGCTATAGGATCTTCACCTGACATGCGAGCGTGGGAGCAGCGATTACTTTACTGTATTCCT : ATTCTAAGGCAGAATTCATGGATTGAATATTCCTCTAAACCCCTACCCAATCCAAGTTCAGAATCCTCATCTCCACAAAGGGAGAAATGCCATAGGGAGGTTGATACAACAATGGATGACATTGATATGCAA : GTCACAAATGAGGAGGTTCAAGCTTCCACCTCCAATAAAAAGATG : CGTGAGAATGGGATCGCTTCCAATTCATCCAATCTAGGGGACACTCCAACTGCTAACGTTGGTTCAGCTACGAGTGTGCTTCCATATTTTGACAGAACTTCTTT</gDNA_template>
            <first_frame> D  G  T  R  L  R  L  P  T  K  S  T  E  S  Y  P  N  D  I  S  K  *  D  S  K  A  S  D  P  A  A  F  D  G  K  D  W  G  A  I  D  L  F  R  K  F  L  Y  D  D  G  G  L  S  Q :   F  E  F  *  I  L  H  L  *  H  D  *  N  P  I  I  L  F  D  F  G  E  *  F  K  I  C  L  E  M  N  C  M  L  A  C  T  R :   M  E  K  L  G  E  R  I  S  L  V  N  S  F  N  Y  L  W  L  *  D  L  H  L  T  C  E  R  G  S  S  D  Y  F  T  V  F  L :   F  *  G  R  I  H  G  L  N  I  P  L  N  P  Y  P  I  Q  V  Q  N  P  H  L  H  K  G  R  N  A  I  G  R  L  I  Q  Q  W  M  T  L  I  C  K :   S  Q  M  R  R  F  K  L  P  P  P  I  K  R  C :   V  R  M  G  S  L  P  I  H  P  I  *  G  T  L  Q  L  L  T  L  V  Q  L  R  V  C  F  H  I  L  T  E  L  L  </first_frame>
            <second_frame>  M  G  L  A  Y  D  C  L  L  N  P  Q  R  A  I  R  M  T  F  Q  N  E  I  L  K  P  L  I  Q  P  P  S  T  A  R  T  G  A  L  L  I  Y  S  G  S  F  S  M  T  M  A  A  F  L   : S  S  S  S  E  S  C  I  Y  S  T  I  E  I  Q  *  S  C  S  I  S  G  N  D  S  R  Y  A  W  K  *  I  V  C  W  H  V  Q   : G  W  R  N  L  E  N  E  *  V  W  *  I  L  S  I  T  Y  G  Y  R  I  F  T  *  H  A  S  V  G  A  A  I  T  L  L  Y  S   : Y  S  K  A  E  F  M  D  *  I  F  L  *  T  P  T  Q  S  K  F  R  I  L  I  S  T  K  G  E  M  P  *  G  G  *  Y  N  N  G  *  H  *  Y  A   : S  H  K  *  G  G  S  S  F  H  L  Q  *  K  D   : A  *  E  W  D  R  F  Q  F  I  Q  S  R  G  H  S  N  C  *  R  W  F  S  Y  E  C  A  S  I  F  *  Q  N  F  F </second_frame>
            <third_frame>   W  D  S  L  T  I  A  Y  *  I  H  R  E  L  S  E  *  H  F  K  M  R  F  *  S  L  *  S  S  R  L  R  R  Q  G  L  G  R  Y  *  S  I  Q  E  V  S  L  *  R  W  R  P  F  S  :  V  R  V  L  N  P  A  S  I  A  R  L  K  S  N  N  L  V  R  F  R  G  M  I  Q  D  M  L  G  N  E  L  Y  V  G  M  Y  K  :  D  G  E  T  W  R  T  N  K  F  G  E  F  F  Q  L  P  M  A  I  G  S  S  P  D  M  R  A  W  E  Q  R  L  L  Y  C  I  P  :  I  L  R  Q  N  S  W  I  E  Y  S  S  K  P  L  P  N  P  S  S  E  S  S  S  P  Q  R  E  K  C  H  R  E  V  D  T  T  M  D  D  I  D  M  Q  :  V  T  N  E  E  V  Q  A  S  T  S  N  K  K  M  :  R  E  N  G  I  A  S  N  S  S  N  L  G  D  T  P  T  A  N  V  G  S  A  T  S  V  L  P  Y  F  D  R  T  S   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06SLm0067G18.1" strand="-"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="4093" stop="4076"/>
                    <exon start="3991" stop="3878"/>
                    <exon start="3790" stop="3677"/>
                    <exon start="3445" stop="3314"/>
                    <exon start="3198" stop="3154"/>
                    <exon start="2971" stop="2870"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>525</number_coding_nucleotides>
                  <number_encoded_amino_acids>175</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RWRPFSVRVLNPASIARLKSNNLVRFRGMIQDMLGNELYVGMYKDGETWRTNKFGEFFQLPMAIGSSPDMRAWEQRLLYCIPILRQNSWIEYSSKPLPNPSSESSSPQREKCHREVDTTMDDIDMQVTNEEVQASTSNKKMRENGIASNSSNLGDTPTANVGSATSVLPYFDRTS</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="-" PGL_start="7988" PGL_stop="6482"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="7988" e_stop="7642"/>
            <exon e_start="7035" e_stop="6972"/>
            <exon e_start="6863" e_stop="6482"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.941" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.960" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="7988" e_stop="7642" e_length="347"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.941">
            <gDNA_intron_boundary i_start="7641" i_stop="7036" i_length="606"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="7035" e_stop="6972" e_length="64"/>
          </exon>
          <intron i_serial="2" don_prob="1.000" acc_prob="0.960">
            <gDNA_intron_boundary i_start="6971" i_stop="6864" i_length="108"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="6863" e_stop="6482" e_length="382"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7988" stop="7642"/>
              <exon start="7035" stop="6972"/>
              <exon start="6863" stop="6741"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E474129" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7982" stop="7642"/>
              <exon start="7035" stop="6972"/>
              <exon start="6863" stop="6682"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E468288" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7970" stop="7642"/>
              <exon start="7035" stop="6972"/>
              <exon start="6863" stop="6523"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E700479" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7970" stop="7642"/>
              <exon start="7035" stop="6972"/>
              <exon start="6863" stop="6763"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E295622" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7963" stop="7642"/>
              <exon start="7035" stop="6972"/>
              <exon start="6863" stop="6482"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E687618" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7960" stop="7642"/>
              <exon start="7035" stop="6972"/>
              <exon start="6863" stop="6653"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E322492" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7942" stop="7642"/>
              <exon start="7035" stop="6972"/>
              <exon start="6863" stop="6825"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E473131" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7936" stop="7642"/>
              <exon start="7035" stop="6972"/>
              <exon start="6863" stop="6791"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E476483" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7921" stop="7642"/>
              <exon start="7035" stop="6972"/>
              <exon start="6863" stop="6820"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E473127" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7763" stop="7642"/>
              <exon start="7035" stop="6972"/>
              <exon start="6863" stop="6833"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E278140" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TAATTAATTACGCCTCAAATTCATACAATATAATGGGGCTTAGGGCTATTCCCTTTTCACCTTCTCAAAATTATTATTTGAGTGGTTCAGAATATTTGCCCAAATGCAGTGTTCTTGGTAGCAGCAGAACTGGCTCATCAAAACTAGTACTAACAATTTCAGCAAAGGCTAAAAAAGATGACGCACAAGAAGAAGAAGAAGAACCAAAAAACAAGAGGAAACAATCGTTGTTTTCAAGTGTAACTGAAGCTCTTGATTTTTCTCAAGTTAGATCTGCAAAGGATGCTGAGCTTCTTGATGAAGCAAGAGAAAAAACTCAATCTGGAGAGAGAATGTCTAAAGAACAG : TATGGAGCTCTTAGAAGGAAGATTGGTGGAACATACAAAGATTTCTTCAAGTCCTATGTTGAAG : TGGATGGACAATATGTGGAGGAGGGATGGGTAGACAAAACATGCAAGGTTTGCAAGAAAGATACAAGTGGAGAAGCAAGACAAGTTGACAAAATGGGACGATATGCGCACGTAGCTTGTCTACAAAAATCCAACCCTGGAAATTTCTTCACCAAGCTCTTCTCAAGATGAATTTTATAGTATATATCCTCCTCATATATATGAATGAACTCCACAGAATATAATAGCCTTGGCCATTTTGTGTTTTTCTTTTTTTCTTGACTCAATCATGAATGTCATCAATTGGTGTTAGCTTCTTGAACAGAGTTATTCAACTATATTGTGTATTCAGAGGCGAATAGAGCTATGATTTTTTGAACTTTATGAATTCTCAATTTAGAATC</gDNA_template>
            <first_frame> *  L  I  T  P  Q  I  H  T  I  *  W  G  L  G  L  F  P  F  H  L  L  K  I  I  I  *  V  V  Q  N  I  C  P  N  A  V  F  L  V  A  A  E  L  A  H  Q  N  *  Y  *  Q  F  Q  Q  R  L  K  K  M  T  H  K  K  K  K  K  N  Q  K  T  R  G  N  N  R  C  F  Q  V  *  L  K  L  L  I  F  L  K  L  D  L  Q  R  M  L  S  F  L  M  K  Q  E  K  K  L  N  L  E  R  E  C  L  K  N  S :   M  E  L  L  E  G  R  L  V  E  H  T  K  I  S  S  S  P  M  L  K  :  W  M  D  N  M  W  R  R  D  G  *  T  K  H  A  R  F  A  R  K  I  Q  V  E  K  Q  D  K  L  T  K  W  D  D  M  R  T  *  L  V  Y  K  N  P  T  L  E  I  S  S  P  S  S  S  Q  D  E  F  Y  S  I  Y  P  P  H  I  Y  E  *  T  P  Q  N  I  I  A  L  A  I  L  C  F  S  F  F  L  D  S  I  M  N  V  I  N  W  C  *  L  L  E  Q  S  Y  S  T  I  L  C  I  Q  R  R  I  E  L  *  F  F  E  L  Y  E  F  S  I  *  N  </first_frame>
            <second_frame>  N  *  L  R  L  K  F  I  Q  Y  N  G  A  *  G  Y  S  L  F  T  F  S  K  L  L  F  E  W  F  R  I  F  A  Q  M  Q  C  S  W  *  Q  Q  N  W  L  I  K  T  S  T  N  N  F  S  K  G  *  K  R  *  R  T  R  R  R  R  R  T  K  K  Q  E  E  T  I  V  V  F  K  C  N  *  S  S  *  F  F  S  S  *  I  C  K  G  C  *  A  S  *  *  S  K  R  K  N  S  I  W  R  E  N  V  *  R  T   : V  W  S  S  *  K  E  D  W  W  N  I  Q  R  F  L  Q  V  L  C  *  S :   G  W  T  I  C  G  G  G  M  G  R  Q  N  M  Q  G  L  Q  E  R  Y  K  W  R  S  K  T  S  *  Q  N  G  T  I  C  A  R  S  L  S  T  K  I  Q  P  W  K  F  L  H  Q  A  L  L  K  M  N  F  I  V  Y  I  L  L  I  Y  M  N  E  L  H  R  I  *  *  P  W  P  F  C  V  F  L  F  F  L  T  Q  S  *  M  S  S  I  G  V  S  F  L  N  R  V  I  Q  L  Y  C  V  F  R  G  E  *  S  Y  D  F  L  N  F  M  N  S  Q  F  R  I </second_frame>
            <third_frame>   I  N  Y  A  S  N  S  Y  N  I  M  G  L  R  A  I  P  F  S  P  S  Q  N  Y  Y  L  S  G  S  E  Y  L  P  K  C  S  V  L  G  S  S  R  T  G  S  S  K  L  V  L  T  I  S  A  K  A  K  K  D  D  A  Q  E  E  E  E  E  P  K  N  K  R  K  Q  S  L  F  S  S  V  T  E  A  L  D  F  S  Q  V  R  S  A  K  D  A  E  L  L  D  E  A  R  E  K  T  Q  S  G  E  R  M  S  K  E  Q  :  Y  G  A  L  R  R  K  I  G  G  T  Y  K  D  F  F  K  S  Y  V  E   : V  D  G  Q  Y  V  E  E  G  W  V  D  K  T  C  K  V  C  K  K  D  T  S  G  E  A  R  Q  V  D  K  M  G  R  Y  A  H  V  A  C  L  Q  K  S  N  P  G  N  F  F  T  K  L  F  S  R  *  I  L  *  Y  I  S  S  S  Y  I  *  M  N  S  T  E  Y  N  S  L  G  H  F  V  F  F  F  F  S  *  L  N  H  E  C  H  Q  L  V  L  A  S  *  T  E  L  F  N  Y  I  V  Y  S  E  A  N  R  A  M  I  F  *  T  L  *  I  L  N  L  E   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06SLm0067G18.1" strand="-"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="7986" stop="7642"/>
                    <exon start="7035" stop="6972"/>
                    <exon start="6863" stop="6694"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>576</number_coding_nucleotides>
                  <number_encoded_amino_acids>192</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>INYASNSYNIMGLRAIPFSPSQNYYLSGSEYLPKCSVLGSSRTGSSKLVLTISAKAKKDDAQEEEEEPKNKRKQSLFSSVTEALDFSQVRSAKDAELLDEAREKTQSGERMSKEQYGALRRKIGGTYKDFFKSYVEVDGQYVEEGWVDKTCKVCKKDTSGEARQVDKMGRYAHVACLQKSNPGNFFTKLFSR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="7959" e_stop="7642"/>
            <exon e_start="7035" e_stop="6921"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.941" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="7959" e_stop="7642" e_length="318"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.941">
            <gDNA_intron_boundary i_start="7641" i_stop="7036" i_length="606"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="7035" e_stop="6921" e_length="115"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7959" stop="7642"/>
              <exon start="7035" stop="6921"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E311140" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ATAATGGGGCTTAGGGCTATTCCCTTTTCACCTTCTCAAAATTATTATTTGAGTGGTTCAGAATATTTGCCCAAATGCAGTGTTCTTGGTAGCAGCAGAACTGGCTCATCAAAACTAGTACTAACAATTTCAGCAAAGGCTAAAAAAGATGACGCACAAGAAGAAGAAGAAGAACCAAAAAACAAGAGGAAACAATCGTTGTTTTCAAGTGTAACTGAAGCTCTTGATTTTTCTCAAGTTAGATCTGCAAAGGATGCTGAGCTTCTTGATGAAGCAAGAGAAAAAACTCAATCTGGAGAGAGAATGTCTAAAGAACAG : TATGGAGCTCTTAGAAGGAAGATTGGTGGAACATACAAAGATTTCTTCAAGTCCTATGTTGAAGGTAATTATATAATAAACTCCTAATTAATTATATTATGTAATGATCTATCTA</gDNA_template>
            <first_frame> I  M  G  L  R  A  I  P  F  S  P  S  Q  N  Y  Y  L  S  G  S  E  Y  L  P  K  C  S  V  L  G  S  S  R  T  G  S  S  K  L  V  L  T  I  S  A  K  A  K  K  D  D  A  Q  E  E  E  E  E  P  K  N  K  R  K  Q  S  L  F  S  S  V  T  E  A  L  D  F  S  Q  V  R  S  A  K  D  A  E  L  L  D  E  A  R  E  K  T  Q  S  G  E  R  M  S  K  E  Q  :  Y  G  A  L  R  R  K  I  G  G  T  Y  K  D  F  F  K  S  Y  V  E  G  N  Y  I  I  N  S  *  L  I  I  L  C  N  D  L  S  </first_frame>
            <second_frame>  *  W  G  L  G  L  F  P  F  H  L  L  K  I  I  I  *  V  V  Q  N  I  C  P  N  A  V  F  L  V  A  A  E  L  A  H  Q  N  *  Y  *  Q  F  Q  Q  R  L  K  K  M  T  H  K  K  K  K  K  N  Q  K  T  R  G  N  N  R  C  F  Q  V  *  L  K  L  L  I  F  L  K  L  D  L  Q  R  M  L  S  F  L  M  K  Q  E  K  K  L  N  L  E  R  E  C  L  K  N  S :   M  E  L  L  E  G  R  L  V  E  H  T  K  I  S  S  S  P  M  L  K  V  I  I  *  *  T  P  N  *  L  Y  Y  V  M  I  Y  L </second_frame>
            <third_frame>   N  G  A  *  G  Y  S  L  F  T  F  S  K  L  L  F  E  W  F  R  I  F  A  Q  M  Q  C  S  W  *  Q  Q  N  W  L  I  K  T  S  T  N  N  F  S  K  G  *  K  R  *  R  T  R  R  R  R  R  T  K  K  Q  E  E  T  I  V  V  F  K  C  N  *  S  S  *  F  F  S  S  *  I  C  K  G  C  *  A  S  *  *  S  K  R  K  N  S  I  W  R  E  N  V  *  R  T   : V  W  S  S  *  K  E  D  W  W  N  I  Q  R  F  L  Q  V  L  C  *  R  *  L  Y  N  K  L  L  I  N  Y  I  M  *  *  S  I   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06SLm0067G18.1" strand="-"/>
                <serials PGL_serial="2" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="7959" stop="7642"/>
                    <exon start="7035" stop="6949"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>402</number_coding_nucleotides>
                  <number_encoded_amino_acids>134</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IMGLRAIPFSPSQNYYLSGSEYLPKCSVLGSSRTGSSKLVLTISAKAKKDDAQEEEEEPKNKRKQSLFSSVTEALDFSQVRSAKDAELLDEAREKTQSGERMSKEQYGALRRKIGGTYKDFFKSYVEGNYIINS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="-" PGL_start="9162" PGL_stop="8336"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="9162" e_stop="8336"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.948"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.948">
            <gDNA_exon_boundary e_start="9162" e_stop="8336" e_length="827"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="9162" stop="8457"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E486530" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="9162" stop="8457"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E486609" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="9162" stop="8739"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E427358" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="8987" stop="8336"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E416180" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CCGGATACTTGTTTTCGTGTGTGTGAAATCGGTGCCTGTCCCTTTTGTTCCCCCAGCTGAGAGGTACCTCGTAGGCCGTGTTGGTCCTGCAGCTCATCGTTCCTATAGATGCATTGTCCGTTATGGTTACCGTGATGTTCACCAGGATGTTGACTCCTTTGAATCCGAACTTGTCAGTAGGCTGGCTGATTTCATCCGGTATGATTGGTACAAGGCACATGGAATCATGGAGACATGCAACGAGGATGACTGCTCACGTTCTGGTGCATCGTCAGGAGAATGTAGACTGACCGTTATAGGAACTCTAGATTTGTCATGCGCACCAGCTTTTGAAGTCGAAGAAACCATGCAGCCTGCAAGCGTGTCTGTGGGTTTTCCTACAGTTGAAAGTGTAACGGATGTGATAGAGATGCAAGCAGTGGAAAGAAGGGTGAGATTTGCGATAGATGACGAGTCGGAAGTGGATTCACGGGACGTAATGGATTGTCAGCTGCAGGGAGAGCTAGAAGATTTATACACAGCACAACAAGCAGGTACAGCATTTGTGCTAGGACATTCACACGTGAAAGCAAAACAAGGATCATCTGTGTTGAAGAGGTTGGCTATAAATTATGGTTATAATTTCCTTAGGAGGAATTGCAGAGGTGCAGATGTATCCCTTAAAGTTCCTCCAGCATCCCTTCTTGAAGTTGGCATGGTCTACATTGTTTAGTTATATATATATATATATATCATTTTTTCACTTTACTTTACTCCTATAGCTATGTAACTTATTAGGACCTTCTTTAGTGAGGTAAATATAATTATTATGCAGATTACTGAAGTTT</gDNA_template>
            <first_frame> P  D  T  C  F  R  V  C  E  I  G  A  C  P  F  C  S  P  S  *  E  V  P  R  R  P  C  W  S  C  S  S  S  F  L  *  M  H  C  P  L  W  L  P  *  C  S  P  G  C  *  L  L  *  I  R  T  C  Q  *  A  G  *  F  H  P  V  *  L  V  Q  G  T  W  N  H  G  D  M  Q  R  G  *  L  L  T  F  W  C  I  V  R  R  M  *  T  D  R  Y  R  N  S  R  F  V  M  R  T  S  F  *  S  R  R  N  H  A  A  C  K  R  V  C  G  F  S  Y  S  *  K  C  N  G  C  D  R  D  A  S  S  G  K  K  G  E  I  C  D  R  *  R  V  G  S  G  F  T  G  R  N  G  L  S  A  A  G  R  A  R  R  F  I  H  S  T  T  S  R  Y  S  I  C  A  R  T  F  T  R  E  S  K  T  R  I  I  C  V  E  E  V  G  Y  K  L  W  L  *  F  P  *  E  E  L  Q  R  C  R  C  I  P  *  S  S  S  S  I  P  S  *  S  W  H  G  L  H  C  L  V  I  Y  I  Y  I  Y  H  F  F  T  L  L  Y  S  Y  S  Y  V  T  Y  *  D  L  L  *  *  G  K  Y  N  Y  Y  A  D  Y  *  S   </first_frame>
            <second_frame>  R  I  L  V  F  V  C  V  K  S  V  P  V  P  F  V  P  P  A  E  R  Y  L  V  G  R  V  G  P  A  A  H  R  S  Y  R  C  I  V  R  Y  G  Y  R  D  V  H  Q  D  V  D  S  F  E  S  E  L  V  S  R  L  A  D  F  I  R  Y  D  W  Y  K  A  H  G  I  M  E  T  C  N  E  D  D  C  S  R  S  G  A  S  S  G  E  C  R  L  T  V  I  G  T  L  D  L  S  C  A  P  A  F  E  V  E  E  T  M  Q  P  A  S  V  S  V  G  F  P  T  V  E  S  V  T  D  V  I  E  M  Q  A  V  E  R  R  V  R  F  A  I  D  D  E  S  E  V  D  S  R  D  V  M  D  C  Q  L  Q  G  E  L  E  D  L  Y  T  A  Q  Q  A  G  T  A  F  V  L  G  H  S  H  V  K  A  K  Q  G  S  S  V  L  K  R  L  A  I  N  Y  G  Y  N  F  L  R  R  N  C  R  G  A  D  V  S  L  K  V  P  P  A  S  L  L  E  V  G  M  V  Y  I  V  *  L  Y  I  Y  I  Y  I  I  F  S  L  Y  F  T  P  I  A  M  *  L  I  R  T  F  F  S  E  V  N  I  I  I  M  Q  I  T  E  V  </second_frame>
            <third_frame>   G  Y  L  F  S  C  V  *  N  R  C  L  S  L  L  F  P  Q  L  R  G  T  S  *  A  V  L  V  L  Q  L  I  V  P  I  D  A  L  S  V  M  V  T  V  M  F  T  R  M  L  T  P  L  N  P  N  L  S  V  G  W  L  I  S  S  G  M  I  G  T  R  H  M  E  S  W  R  H  A  T  R  M  T  A  H  V  L  V  H  R  Q  E  N  V  D  *  P  L  *  E  L  *  I  C  H  A  H  Q  L  L  K  S  K  K  P  C  S  L  Q  A  C  L  W  V  F  L  Q  L  K  V  *  R  M  *  *  R  C  K  Q  W  K  E  G  *  D  L  R  *  M  T  S  R  K  W  I  H  G  T  *  W  I  V  S  C  R  E  S  *  K  I  Y  T  Q  H  N  K  Q  V  Q  H  L  C  *  D  I  H  T  *  K  Q  N  K  D  H  L  C  *  R  G  W  L  *  I  M  V  I  I  S  L  G  G  I  A  E  V  Q  M  Y  P  L  K  F  L  Q  H  P  F  L  K  L  A  W  S  T  L  F  S  Y  I  Y  I  Y  I  S  F  F  H  F  T  L  L  L  *  L  C  N  L  L  G  P  S  L  V  R  *  I  *  L  L  C  R  L  L  K  F </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06SLm0067G18.1" strand="-"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="9161" stop="8451"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>708</number_coding_nucleotides>
                  <number_encoded_amino_acids>236</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RILVFVCVKSVPVPFVPPAERYLVGRVGPAAHRSYRCIVRYGYRDVHQDVDSFESELVSRLADFIRYDWYKAHGIMETCNEDDCSRSGASSGECRLTVIGTLDLSCAPAFEVEETMQPASVSVGFPTVESVTDVIEMQAVERRVRFAIDDESEVDSRDVMDCQLQGELEDLYTAQQAGTAFVLGHSHVKAKQGSSVLKRLAINYGYNFLRRNCRGADVSLKVPPASLLEVGMVYIV*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="-" PGL_start="9717" PGL_stop="9317"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="9717" e_stop="9317"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.925"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.925">
            <gDNA_exon_boundary e_start="9717" e_stop="9317" e_length="401"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="9717" stop="9317"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E329372" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TAAACAGCTCTTTTCTTTTCTTTTGTTTTCCTATTAGTCTCTTTTCTATCTTCTCTATATGAATGAAGTTGTATAGAAGCTCAGCAAGCACTTAACTTGGAACTTCAGTGTATATCTTAAGGTGTCACAGTTTCATCCTTTACCAATTGCAGGACTAGCAGTGATGGCGGTGATGCTAGTGACCACTTGCCTTACTTCATTAGTTATCATCCTCTGCTGGAACAAGCCTCCAATACTGGCCCTTGGATTTCTCCTTGTGTTTGGGTCTATTGAGTTACTCTACTTCTCAGCCTCCGTCATCAAGTTTCTTGAAGGTGCTTGGCTTCCAATCCTGCTTGCACTCTTTTTGGTTACTGTCATGTTTGTTTGGCACTACGCCACAGTTAAAAAGTATGAATATG</gDNA_template>
            <first_frame> *  T  A  L  F  F  S  F  V  F  L  L  V  S  F  L  S  S  L  Y  E  *  S  C  I  E  A  Q  Q  A  L  N  L  E  L  Q  C  I  S  *  G  V  T  V  S  S  F  T  N  C  R  T  S  S  D  G  G  D  A  S  D  H  L  P  Y  F  I  S  Y  H  P  L  L  E  Q  A  S  N  T  G  P  W  I  S  P  C  V  W  V  Y  *  V  T  L  L  L  S  L  R  H  Q  V  S  *  R  C  L  A  S  N  P  A  C  T  L  F  G  Y  C  H  V  C  L  A  L  R  H  S  *  K  V  *  I   </first_frame>
            <second_frame>  K  Q  L  F  S  F  L  L  F  S  Y  *  S  L  F  Y  L  L  Y  M  N  E  V  V  *  K  L  S  K  H  L  T  W  N  F  S  V  Y  L  K  V  S  Q  F  H  P  L  P  I  A  G  L  A  V  M  A  V  M  L  V  T  T  C  L  T  S  L  V  I  I  L  C  W  N  K  P  P  I  L  A  L  G  F  L  L  V  F  G  S  I  E  L  L  Y  F  S  A  S  V  I  K  F  L  E  G  A  W  L  P  I  L  L  A  L  F  L  V  T  V  M  F  V  W  H  Y  A  T  V  K  K  Y  E  Y  </second_frame>
            <third_frame>   N  S  S  F  L  F  F  C  F  P  I  S  L  F  S  I  F  S  I  *  M  K  L  Y  R  S  S  A  S  T  *  L  G  T  S  V  Y  I  L  R  C  H  S  F  I  L  Y  Q  L  Q  D  *  Q  *  W  R  *  C  *  *  P  L  A  L  L  H  *  L  S  S  S  A  G  T  S  L  Q  Y  W  P  L  D  F  S  L  C  L  G  L  L  S  Y  S  T  S  Q  P  P  S  S  S  F  L  K  V  L  G  F  Q  S  C  L  H  S  F  W  L  L  S  C  L  F  G  T  T  P  Q  L  K  S  M  N  M </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06SLm0067G18.1" strand="-"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="9641" stop="9318"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>324</number_coding_nucleotides>
                  <number_encoded_amino_acids>108</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KLSKHLTWNFSVYLKVSQFHPLPIAGLAVMAVMLVTTCLTSLVIILCWNKPPILALGFLLVFGSIELLYFSASVIKFLEGAWLPILLALFLVTVMFVWHYATVKKYEY</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="-" PGL_start="15103" PGL_stop="11759"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="15103" e_stop="14858"/>
            <exon e_start="14776" e_stop="14723"/>
            <exon e_start="12989" e_stop="12729"/>
            <exon e_start="11806" e_stop="11759"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.990" acc_prob="0.847" e_score="0.967"/>
          <exon-intron don_prob="0.985" acc_prob="0.996" e_score="0.981"/>
          <exon-intron don_prob="0.965" acc_prob="0.987" e_score="0.981"/>
          <exon-only e_score="0.979"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.967">
            <gDNA_exon_boundary e_start="15103" e_stop="14858" e_length="246"/>
          </exon>
          <intron i_serial="1" don_prob="0.990" acc_prob="0.847">
            <gDNA_intron_boundary i_start="14857" i_stop="14777" i_length="81"/>
          </intron>
          <exon e_serial="2" e_score="0.981">
            <gDNA_exon_boundary e_start="14776" e_stop="14723" e_length="54"/>
          </exon>
          <intron i_serial="2" don_prob="0.985" acc_prob="0.996">
            <gDNA_intron_boundary i_start="14722" i_stop="12990" i_length="1733"/>
          </intron>
          <exon e_serial="3" e_score="0.981">
            <gDNA_exon_boundary e_start="12989" e_stop="12729" e_length="261"/>
          </exon>
          <intron i_serial="3" don_prob="0.965" acc_prob="0.987">
            <gDNA_intron_boundary i_start="12728" i_stop="11807" i_length="922"/>
          </intron>
          <exon e_serial="4" e_score="0.979">
            <gDNA_exon_boundary e_start="11806" e_stop="11759" e_length="48"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15103" stop="14858"/>
              <exon start="14776" stop="14723"/>
              <exon start="12989" stop="12729"/>
              <exon start="11806" stop="11759"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E573544" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GTGGTACTTTTGCGCTCTATTCCTTAATATGCAGGCATGCCAAAGTTAGCCTTCTACCTAACAGACAAGTTGCTGATGAAGCTCTTTCTACCTACAAACTTGAGCACCCTCCTGAGATGAAGAACAGCTCAAAGTTGAAGTTGCTTCTTGAGAAGCATAAGTCCTTACACACTGCTCTGCTAATTTTGGTACTTCTTGGCACTTGTATGGTGATTGGAGATGGGCTGCTTACTCCAGCCATATCCG : TATTCTCTGCGGTCTCTGGTCTTGAGTTATCGATGTCTCGGGAGCATCATCAAT : ATGCAGTGATTCCAATAACTTGCTTCATATTGATCTGCCTATTCGCATTACAACATTATGGCACACATCGAGTTGGTTTTTGTTTTGCACCAATTGTGATGACCTGGTTACTCTGCATTAGTGCTCTTGGGTTATACAACATTATCCACTGGAATCCACAGGTTTACAAAGCTCTTTCCCCCTATTACATGGTAAAGTTCCTGAAGAAAACAAGAAAAGGTGGATGGATGTCTTTGGGTGGAATTCTGCTCTGCATAACTG : GTTCTGAAGCAATGTTTGCTGATCTTGGGCATTTTTCATATACTGCAA</gDNA_template>
            <first_frame> V  V  L  L  R  S  I  P  *  Y  A  G  M  P  K  L  A  F  Y  L  T  D  K  L  L  M  K  L  F  L  P  T  N  L  S  T  L  L  R  *  R  T  A  Q  S  *  S  C  F  L  R  S  I  S  P  Y  T  L  L  C  *  F  W  Y  F  L  A  L  V  W  *  L  E  M  G  C  L  L  Q  P  Y  P  :  Y  S  L  R  S  L  V  L  S  Y  R  C  L  G  S  I  I  N  :  M  Q  *  F  Q  *  L  A  S  Y  *  S  A  Y  S  H  Y  N  I  M  A  H  I  E  L  V  F  V  L  H  Q  L  *  *  P  G  Y  S  A  L  V  L  L  G  Y  T  T  L  S  T  G  I  H  R  F  T  K  L  F  P  P  I  T  W  *  S  S  *  R  K  Q  E  K  V  D  G  C  L  W  V  E  F  C  S  A  *  L  :  V  L  K  Q  C  L  L  I  L  G  I  F  H  I  L  Q </first_frame>
            <second_frame>  W  Y  F  C  A  L  F  L  N  M  Q  A  C  Q  S  *  P  S  T  *  Q  T  S  C  *  *  S  S  F  Y  L  Q  T  *  A  P  S  *  D  E  E  Q  L  K  V  E  V  A  S  *  E  A  *  V  L  T  H  C  S  A  N  F  G  T  S  W  H  L  Y  G  D  W  R  W  A  A  Y  S  S  H  I  R :   I  L  C  G  L  W  S  *  V  I  D  V  S  G  A  S  S  I :   C  S  D  S  N  N  L  L  H  I  D  L  P  I  R  I  T  T  L  W  H  T  S  S  W  F  L  F  C  T  N  C  D  D  L  V  T  L  H  *  C  S  W  V  I  Q  H  Y  P  L  E  S  T  G  L  Q  S  S  F  P  L  L  H  G  K  V  P  E  E  N  K  K  R  W  M  D  V  F  G  W  N  S  A  L  H  N  W :   F  *  S  N  V  C  *  S  W  A  F  F  I  Y  C   </second_frame>
            <third_frame>   G  T  F  A  L  Y  S  L  I  C  R  H  A  K  V  S  L  L  P  N  R  Q  V  A  D  E  A  L  S  T  Y  K  L  E  H  P  P  E  M  K  N  S  S  K  L  K  L  L  L  E  K  H  K  S  L  H  T  A  L  L  I  L  V  L  L  G  T  C  M  V  I  G  D  G  L  L  T  P  A  I  S   : V  F  S  A  V  S  G  L  E  L  S  M  S  R  E  H  H  Q   : Y  A  V  I  P  I  T  C  F  I  L  I  C  L  F  A  L  Q  H  Y  G  T  H  R  V  G  F  C  F  A  P  I  V  M  T  W  L  L  C  I  S  A  L  G  L  Y  N  I  I  H  W  N  P  Q  V  Y  K  A  L  S  P  Y  Y  M  V  K  F  L  K  K  T  R  K  G  G  W  M  S  L  G  G  I  L  L  C  I  T   : G  S  E  A  M  F  A  D  L  G  H  F  S  Y  T  A  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06SLm0067G18.1" strand="-"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="15101" stop="14858"/>
                    <exon start="14776" stop="14723"/>
                    <exon start="12989" stop="12729"/>
                    <exon start="11806" stop="11760"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>606</number_coding_nucleotides>
                  <number_encoded_amino_acids>202</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GTFALYSLICRHAKVSLLPNRQVADEALSTYKLEHPPEMKNSSKLKLLLEKHKSLHTALLILVLLGTCMVIGDGLLTPAISVFSAVSGLELSMSREHHQYAVIPITCFILICLFALQHYGTHRVGFCFAPIVMTWLLCISALGLYNIIHWNPQVYKALSPYYMVKFLKKTRKGGWMSLGGILLCITGSEAMFADLGHFSYTA</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="+" PGL_start="36384" PGL_stop="36560"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="36384" e_stop="36560"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.944"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.944">
            <gDNA_exon_boundary e_start="36384" e_stop="36560" e_length="177"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36384" stop="36560"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E577888" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CTACATCTCCTACCATACAAGGCTTCGAATGGAGCCATGTCAATGCTTAAGTGATAGCTATTATTGTATGAAAACTCCGCTAAGGGTAGAAAGCTATCCCAATGACCACCAAACTCTATCACACACGCACGAAGCATATCCTCCAACACTTGAATCGTCCTTTCAGACTGACCATCG</gDNA_template>
            <first_frame> L  H  L  L  P  Y  K  A  S  N  G  A  M  S  M  L  K  *  *  L  L  L  Y  E  N  S  A  K  G  R  K  L  S  Q  *  P  P  N  S  I  T  H  A  R  S  I  S  S  N  T  *  I  V  L  S  D  *  P  S </first_frame>
            <second_frame>  Y  I  S  Y  H  T  R  L  R  M  E  P  C  Q  C  L  S  D  S  Y  Y  C  M  K  T  P  L  R  V  E  S  Y  P  N  D  H  Q  T  L  S  H  T  H  E  A  Y  P  P  T  L  E  S  S  F  Q  T  D  H   </second_frame>
            <third_frame>   T  S  P  T  I  Q  G  F  E  W  S  H  V  N  A  *  V  I  A  I  I  V  *  K  L  R  *  G  *  K  A  I  P  M  T  T  K  L  Y  H  T  R  T  K  H  I  L  Q  H  L  N  R  P  F  R  L  T  I  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C06SLm0067G18.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="+" PGL_start="37865" PGL_stop="40574"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="37865" e_stop="40574"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.941"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.941">
            <gDNA_exon_boundary e_start="37865" e_stop="40574" e_length="2710"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37865" stop="38577"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E379315" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37865" stop="38460"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E375319" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37865" stop="38390"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E204434" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37936" stop="38615"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E368762" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37936" stop="38294"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E240817" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="38385" stop="39043"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E355232" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="38454" stop="39215"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E355244" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="38454" stop="39114"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E351414" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="38857" stop="39187"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E352716" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="39064" stop="39622"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E244046" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="39068" stop="39830"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E214046" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="39148" stop="39936"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E356912" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="39150" stop="39683"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E353805" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="39224" stop="39920"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E356209" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="39784" stop="40503"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E356614" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="39787" stop="40450"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E352401" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="40142" stop="40574"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E352180" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GAATCCCTTGACAAATCGGCGGTAGTAGCTAGCTAACCCAACAAAGCTCCTTATTTCTGACACATTAGTGGGTCTTACCCAATTCTTCACTGTCTCAATCTTAGAAGGATCCACCATCACTCCATCCTTAGAAACCACGTGCCCCAAGAAGGACACCGCATCTAGCCAAAACTCACACTTAGAGAACTTGGCATAAAGCTTTTTCTCCCTCAACATTTCCAATACCATTCTCAAATGCTCTTCATGTTCCTTCTTTATCTTTGAGTATACCAATATATCATCAATAAATACGATCACGAAGAGGTCCAAATATGGCTTAAAAATCCCGTTCATCAAGCTCATGAACGCAGCAGGGGCATTCGTAAAACCAAAGGACATCACTACAAATTCGTAATGCCCATACCTCGTTTGAAAAGCAGTCTTTGGTACATCCGTTGCCCGTATTTTCAATTGATGATAACCGGATCTCAAGTCAATCTTAGAGAAGACACAAGCACCTTGTAACTGATCGAACAAATCATCAATGCGGGGAAGAGGATACTTGTTCTTTATGGTTACCTTATTTAGTTGTCTGTAGTCTATACACATTCGAAAACTCCCATCCTTCTTCTTTACAAACAAAACCGTAGCACCCCAAGGAGATGCACTTGGTCTAATGAAGCCTTTGTTCAATAACTCTTGAAGTTGTGCTTTTAACTCTCTTAACTCCACGGGAGCCATTCTATAAGGGGGTATAGAAATGGGGCGAGTACCAGATTCAAGATCAATACAGAAGTCAATATCCCTATCCGGTGGCATACCAGGAAGATCTGCAGGGAACACATCCAGAAACTCACGAACTACTGAAACCGACTCAATCGAAGGTACTTGGGTAGTGTCATCCTTGAGATGTGCCAAGAAAGCTAAACACCCTTTACTAATCATTTTCTTAGCACGAAGAAAGGAGACGATTCGGACCGGATTGGAAGTGTAGTCACCCTCCCACACTAACGGATTTGTCCCAGGCTTGGCTAACGTCACCGTTTTAGCATTACAATCCAAGATTGCAAATTGCGGAGAAAGCCAAGTCATACCCAGAATTACGTCAAAATCAACCATTTCTAAGGTAACCAAATCTACATAAGTGTTGCTCCCCACAAAGTTTACCAAACAAGACCTATATACCTTTTCAACTACCACAGACTCACCCACCGGAGTAGAGACACGAATAGGCATATCAAGTAATTCACAATGTAAATTTAGACCATTAGCAAATGAGGAAGATACATAAGAAAACGTGGATCCAGGATCAAACAATACAGAAGCCATGCAATCACAAACCAGAAGATTACCTGTGATGACAGCATCAGATGCCTCCGCTTCAGACCGCCCAGGGAAAGCGTAACAATGGGCCCTATCGTTCGTCTATCCGTTGCCCCTACCATGTTGTGATGTAGTGGCCCCAGTTTGCCCATTACCTCTGCCGTTTTGGTGACCGCTATTACCTCGACCACCACGCCCTCCAGAAAAACGACCTCTACCATGACCACCTCTACCTCTAGTTATTGGGGGTCTGTAACTTGGTCTGGGACAATTTCTCCTAATATGTCCAATCTCCCCACATCCATAACATTCTTTGGAGTCGATCATATGCCCCTCGGAGAAGTGTTGACCGGTCTGAGGTGGTCCCCCAACTACAGTCTGTAGTGAAGACTGAATTGGTCGGACTGAGTAACTTCCCGAACCTTGTCCTCTAGTGTAAGAACCATTAAACTCACCTACCTTTCGAATTCTTTTTGATGTCGATGTTGTGGTGAAGTCGTCTGGCTTCACTCCTTCCACTTCTATCACAAAGTCTACCACCTCTTGGAAGGATTTTGCCGTTGCCGCTATCGTAAGGCCGAAATCCGCAATTCTGACCTCAACCCCTTCACAAACCGGCGAATCCGCTCTTGAGGACTGAAACAGAGTTGAGTGGCATATCTGGATAGTGCACGAAACTTAGCCTCATAAGCATTAACCGACATCCTACCTTGCTCTAGGTTCAAGAACTCATCCCTTTTCCTATCCCTCAAAGTCCGGGGGATATAATTCTCCATAAACAAACTAGAGAATGAGGCCCAAGTCATAGGTGGTGCCTCTATTGGTTGACACTCGATATGTGACCGCCATCACATTTTGGCGTTCCCTTGAAACTGATAAGTCACAAACTCCACACCAAACCGTTCTACTATACCCATCTTGTGTAGTAACTCGTGACAGTCAACCAGAAAATCATAGGCATCCTCCGATTCAGCACCCTTGAAGACCGGAGGTTTCAATTTCAAGAACTTACTGAAAAGTTCATACTGATCATTTGTCATTATAGGCCCAGTAGTCAGACGTGGAAATGTGCCTATGTCCAATGGAACATCCATGCGGGGAGCCATAGTAGCCGCATGTTGTACTTCTGAAACCGGAGGTGTTGGCACAGAAAACACTGGAGGTGCCTGACCTTGATCAGATAACCCGCTAAGATAAGCCAGAACCTGATTGATCATCTCTGGGGTAGGTTGGGGTGGCATTTCCTCATTTTGCACTTGTTCAGTTTCCCCATCCTCCCCTTCTCTTATTACTTCCTCGGTCGGTGGAGAAGTCACTGCCCTAGTATCAGATGGGCTAGGTGCTTGTCCTCTCCCTCTAGAGGACGTCCTCCCACGACCTCTTCCACGGCCCCTTGCCGCTGTTCTTC</gDNA_template>
            <first_frame> E  S  L  D  K  S  A  V  V  A  S  *  P  N  K  A  P  Y  F  *  H  I  S  G  S  Y  P  I  L  H  C  L  N  L  R  R  I  H  H  H  S  I  L  R  N  H  V  P  Q  E  G  H  R  I  *  P  K  L  T  L  R  E  L  G  I  K  L  F  L  P  Q  H  F  Q  Y  H  S  Q  M  L  F  M  F  L  L  Y  L  *  V  Y  Q  Y  I  I  N  K  Y  D  H  E  E  V  Q  I  W  L  K  N  P  V  H  Q  A  H  E  R  S  R  G  I  R  K  T  K  G  H  H  Y  K  F  V  M  P  I  P  R  L  K  S  S  L  W  Y  I  R  C  P  Y  F  Q  L  M  I  T  G  S  Q  V  N  L  R  E  D  T  S  T  L  *  L  I  E  Q  I  I  N  A  G  K  R  I  L  V  L  Y  G  Y  L  I  *  L  S  V  V  Y  T  H  S  K  T  P  I  L  L  L  Y  K  Q  N  R  S  T  P  R  R  C  T  W  S  N  E  A  F  V  Q  *  L  L  K  L  C  F  *  L  S  *  L  H  G  S  H  S  I  R  G  Y  R  N  G  A  S  T  R  F  K  I  N  T  E  V  N  I  P  I  R  W  H  T  R  K  I  C  R  E  H  I  Q  K  L  T  N  Y  *  N  R  L  N  R  R  Y  L  G  S  V  I  L  E  M  C  Q  E  S  *  T  P  F  T  N  H  F  L  S  T  K  K  G  D  D  S  D  R  I  G  S  V  V  T  L  P  H  *  R  I  C  P  R  L  G  *  R  H  R  F  S  I  T  I  Q  D  C  K  L  R  R  K  P  S  H  T  Q  N  Y  V  K  I  N  H  F  *  G  N  Q  I  Y  I  S  V  A  P  H  K  V  Y  Q  T  R  P  I  Y  L  F  N  Y  H  R  L  T  H  R  S  R  D  T  N  R  H  I  K  *  F  T  M  *  I  *  T  I  S  K  *  G  R  Y  I  R  K  R  G  S  R  I  K  Q  Y  R  S  H  A  I  T  N  Q  K  I  T  C  D  D  S  I  R  C  L  R  F  R  P  P  R  E  S  V  T  M  G  P  I  V  R  L  S  V  A  P  T  M  L  *  C  S  G  P  S  L  P  I  T  S  A  V  L  V  T  A  I  T  S  T  T  T  P  S  R  K  T  T  S  T  M  T  T  S  T  S  S  Y  W  G  S  V  T  W  S  G  T  I  S  P  N  M  S  N  L  P  T  S  I  T  F  F  G  V  D  H  M  P  L  G  E  V  L  T  G  L  R  W  S  P  N  Y  S  L  *  *  R  L  N  W  S  D  *  V  T  S  R  T  L  S  S  S  V  R  T  I  K  L  T  Y  L  S  N  S  F  *  C  R  C  C  G  E  V  V  W  L  H  S  F  H  F  Y  H  K  V  Y  H  L  L  E  G  F  C  R  C  R  Y  R  K  A  E  I  R  N  S  D  L  N  P  F  T  N  R  R  I  R  S  *  G  L  K  Q  S  *  V  A  Y  L  D  S  A  R  N  L  A  S  *  A  L  T  D  I  L  P  C  S  R  F  K  N  S  S  L  F  L  S  L  K  V  R  G  I  *  F  S  I  N  K  L  E  N  E  A  Q  V  I  G  G  A  S  I  G  *  H  S  I  C  D  R  H  H  I  L  A  F  P  *  N  *  *  V  T  N  S  T  P  N  R  S  T  I  P  I  L  C  S  N  S  *  Q  S  T  R  K  S  *  A  S  S  D  S  A  P  L  K  T  G  G  F  N  F  K  N  L  L  K  S  S  Y  *  S  F  V  I  I  G  P  V  V  R  R  G  N  V  P  M  S  N  G  T  S  M  R  G  A  I  V  A  A  C  C  T  S  E  T  G  G  V  G  T  E  N  T  G  G  A  *  P  *  S  D  N  P  L  R  *  A  R  T  *  L  I  I  S  G  V  G  W  G  G  I  S  S  F  C  T  C  S  V  S  P  S  S  P  S  L  I  T  S  S  V  G  G  E  V  T  A  L  V  S  D  G  L  G  A  C  P  L  P  L  E  D  V  L  P  R  P  L  P  R  P  L  A  A  V  L  </first_frame>
            <second_frame>  N  P  L  T  N  R  R  *  *  L  A  N  P  T  K  L  L  I  S  D  T  L  V  G  L  T  Q  F  F  T  V  S  I  L  E  G  S  T  I  T  P  S  L  E  T  T  C  P  K  K  D  T  A  S  S  Q  N  S  H  L  E  N  L  A  *  S  F  F  S  L  N  I  S  N  T  I  L  K  C  S  S  C  S  F  F  I  F  E  Y  T  N  I  S  S  I  N  T  I  T  K  R  S  K  Y  G  L  K  I  P  F  I  K  L  M  N  A  A  G  A  F  V  K  P  K  D  I  T  T  N  S  *  C  P  Y  L  V  *  K  A  V  F  G  T  S  V  A  R  I  F  N  *  *  *  P  D  L  K  S  I  L  E  K  T  Q  A  P  C  N  *  S  N  K  S  S  M  R  G  R  G  Y  L  F  F  M  V  T  L  F  S  C  L  *  S  I  H  I  R  K  L  P  S  F  F  F  T  N  K  T  V  A  P  Q  G  D  A  L  G  L  M  K  P  L  F  N  N  S  *  S  C  A  F  N  S  L  N  S  T  G  A  I  L  *  G  G  I  E  M  G  R  V  P  D  S  R  S  I  Q  K  S  I  S  L  S  G  G  I  P  G  R  S  A  G  N  T  S  R  N  S  R  T  T  E  T  D  S  I  E  G  T  W  V  V  S  S  L  R  C  A  K  K  A  K  H  P  L  L  I  I  F  L  A  R  R  K  E  T  I  R  T  G  L  E  V  *  S  P  S  H  T  N  G  F  V  P  G  L  A  N  V  T  V  L  A  L  Q  S  K  I  A  N  C  G  E  S  Q  V  I  P  R  I  T  S  K  S  T  I  S  K  V  T  K  S  T  *  V  L  L  P  T  K  F  T  K  Q  D  L  Y  T  F  S  T  T  T  D  S  P  T  G  V  E  T  R  I  G  I  S  S  N  S  Q  C  K  F  R  P  L  A  N  E  E  D  T  *  E  N  V  D  P  G  S  N  N  T  E  A  M  Q  S  Q  T  R  R  L  P  V  M  T  A  S  D  A  S  A  S  D  R  P  G  K  A  *  Q  W  A  L  S  F  V  Y  P  L  P  L  P  C  C  D  V  V  A  P  V  C  P  L  P  L  P  F  W  *  P  L  L  P  R  P  P  R  P  P  E  K  R  P  L  P  *  P  P  L  P  L  V  I  G  G  L  *  L  G  L  G  Q  F  L  L  I  C  P  I  S  P  H  P  *  H  S  L  E  S  I  I  C  P  S  E  K  C  *  P  V  *  G  G  P  P  T  T  V  C  S  E  D  *  I  G  R  T  E  *  L  P  E  P  C  P  L  V  *  E  P  L  N  S  P  T  F  R  I  L  F  D  V  D  V  V  V  K  S  S  G  F  T  P  S  T  S  I  T  K  S  T  T  S  W  K  D  F  A  V  A  A  I  V  R  P  K  S  A  I  L  T  S  T  P  S  Q  T  G  E  S  A  L  E  D  *  N  R  V  E  W  H  I  W  I  V  H  E  T  *  P  H  K  H  *  P  T  S  Y  L  A  L  G  S  R  T  H  P  F  S  Y  P  S  K  S  G  G  Y  N  S  P  *  T  N  *  R  M  R  P  K  S  *  V  V  P  L  L  V  D  T  R  Y  V  T  A  I  T  F  W  R  S  L  E  T  D  K  S  Q  T  P  H  Q  T  V  L  L  Y  P  S  C  V  V  T  R  D  S  Q  P  E  N  H  R  H  P  P  I  Q  H  P  *  R  P  E  V  S  I  S  R  T  Y  *  K  V  H  T  D  H  L  S  L  *  A  Q  *  S  D  V  E  M  C  L  C  P  M  E  H  P  C  G  E  P  *  *  P  H  V  V  L  L  K  P  E  V  L  A  Q  K  T  L  E  V  P  D  L  D  Q  I  T  R  *  D  K  P  E  P  D  *  S  S  L  G  *  V  G  V  A  F  P  H  F  A  L  V  Q  F  P  H  P  P  L  L  L  L  L  P  R  S  V  E  K  S  L  P  *  Y  Q  M  G  *  V  L  V  L  S  L  *  R  T  S  S  H  D  L  F  H  G  P  L  P  L  F  F </second_frame>
            <third_frame>   I  P  *  Q  I  G  G  S  S  *  L  T  Q  Q  S  S  L  F  L  T  H  *  W  V  L  P  N  S  S  L  S  Q  S  *  K  D  P  P  S  L  H  P  *  K  P  R  A  P  R  R  T  P  H  L  A  K  T  H  T  *  R  T  W  H  K  A  F  S  P  S  T  F  P  I  P  F  S  N  A  L  H  V  P  S  L  S  L  S  I  P  I  Y  H  Q  *  I  R  S  R  R  G  P  N  M  A  *  K  S  R  S  S  S  S  *  T  Q  Q  G  H  S  *  N  Q  R  T  S  L  Q  I  R  N  A  H  T  S  F  E  K  Q  S  L  V  H  P  L  P  V  F  S  I  D  D  N  R  I  S  S  Q  S  *  R  R  H  K  H  L  V  T  D  R  T  N  H  Q  C  G  E  E  D  T  C  S  L  W  L  P  Y  L  V  V  C  S  L  Y  T  F  E  N  S  H  P  S  S  L  Q  T  K  P  *  H  P  K  E  M  H  L  V  *  *  S  L  C  S  I  T  L  E  V  V  L  L  T  L  L  T  P  R  E  P  F  Y  K  G  V  *  K  W  G  E  Y  Q  I  Q  D  Q  Y  R  S  Q  Y  P  Y  P  V  A  Y  Q  E  D  L  Q  G  T  H  P  E  T  H  E  L  L  K  P  T  Q  S  K  V  L  G  *  C  H  P  *  D  V  P  R  K  L  N  T  L  Y  *  S  F  S  *  H  E  E  R  R  R  F  G  P  D  W  K  C  S  H  P  P  T  L  T  D  L  S  Q  A  W  L  T  S  P  F  *  H  Y  N  P  R  L  Q  I  A  E  K  A  K  S  Y  P  E  L  R  Q  N  Q  P  F  L  R  *  P  N  L  H  K  C  C  S  P  Q  S  L  P  N  K  T  Y  I  P  F  Q  L  P  Q  T  H  P  P  E  *  R  H  E  *  A  Y  Q  V  I  H  N  V  N  L  D  H  *  Q  M  R  K  I  H  K  K  T  W  I  Q  D  Q  T  I  Q  K  P  C  N  H  K  P  E  D  Y  L  *  *  Q  H  Q  M  P  P  L  Q  T  A  Q  G  K  R  N  N  G  P  Y  R  S  S  I  R  C  P  Y  H  V  V  M  *  W  P  Q  F  A  H  Y  L  C  R  F  G  D  R  Y  Y  L  D  H  H  A  L  Q  K  N  D  L  Y  H  D  H  L  Y  L  *  L  L  G  V  C  N  L  V  W  D  N  F  S  *  Y  V  Q  S  P  H  I  H  N  I  L  W  S  R  S  Y  A  P  R  R  S  V  D  R  S  E  V  V  P  Q  L  Q  S  V  V  K  T  E  L  V  G  L  S  N  F  P  N  L  V  L  *  C  K  N  H  *  T  H  L  P  F  E  F  F  L  M  S  M  L  W  *  S  R  L  A  S  L  L  P  L  L  S  Q  S  L  P  P  L  G  R  I  L  P  L  P  L  S  *  G  R  N  P  Q  F  *  P  Q  P  L  H  K  P  A  N  P  L  L  R  T  E  T  E  L  S  G  I  S  G  *  C  T  K  L  S  L  I  S  I  N  R  H  P  T  L  L  *  V  Q  E  L  I  P  F  P  I  P  Q  S  P  G  D  I  I  L  H  K  Q  T  R  E  *  G  P  S  H  R  W  C  L  Y  W  L  T  L  D  M  *  P  P  S  H  F  G  V  P  L  K  L  I  S  H  K  L  H  T  K  P  F  Y  Y  T  H  L  V  *  *  L  V  T  V  N  Q  K  I  I  G  I  L  R  F  S  T  L  E  D  R  R  F  Q  F  Q  E  L  T  E  K  F  I  L  I  I  C  H  Y  R  P  S  S  Q  T  W  K  C  A  Y  V  Q  W  N  I  H  A  G  S  H  S  S  R  M  L  Y  F  *  N  R  R  C  W  H  R  K  H  W  R  C  L  T  L  I  R  *  P  A  K  I  S  Q  N  L  I  D  H  L  W  G  R  L  G  W  H  F  L  I  L  H  L  F  S  F  P  I  L  P  F  S  Y  Y  F  L  G  R  W  R  S  H  C  P  S  I  R  W  A  R  C  L  S  S  P  S  R  G  R  P  P  T  T  S  S  T  A  P  C  R  C  S   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06SLm0067G18.1" strand="+"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="39296" stop="39550"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>252</number_coding_nucleotides>
                  <number_encoded_amino_acids>84</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>CSGPSLPITSAVLVTAITSTTTPSRKTTSTMTTSTSSYWGSVTWSGTISPNMSNLPTSITFFGVDHMPLGEVLTGLRWSPNYSL*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06SLm0067G18.1" strand="+"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="38592" stop="38837"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>243</number_coding_nucleotides>
                  <number_encoded_amino_acids>81</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GGIEMGRVPDSRSIQKSISLSGGIPGRSAGNTSRNSRTTETDSIEGTWVVSSLRCAKKAKHPLLIIFLARRKETIRTGLEV*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06SLm0067G18.1" strand="+"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="38129" stop="38368"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>237</number_coding_nucleotides>
                  <number_encoded_amino_acids>79</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VYQYIINKYDHEEVQIWLKNPVHQAHERSRGIRKTKGHHYKFVMPIPRLKSSLWYIRCPYFQLMITGSQVNLREDTSTL*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06SLm0067G18.1" strand="+"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="4"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="40351" stop="40572"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>222</number_coding_nucleotides>
                  <number_encoded_amino_acids>74</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PAKISQNLIDHLWGRLGWHFLILHLFSFPILPFSYYFLGRWRSHCPSIRWARCLSSPSRGRPPTTSSTAPCRCS</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06SLm0067G18.1" strand="+"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="5"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="40376" stop="40573"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>198</number_coding_nucleotides>
                  <number_encoded_amino_acids>66</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LIISGVGWGGISSFCTCSVSPSSPSLITSSVGGEVTALVSDGLGACPLPLEDVLPRPLPRPLAAVL</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06SLm0067G18.1" strand="+"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="6"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="39606" stop="39806"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>198</number_coding_nucleotides>
                  <number_encoded_amino_acids>66</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EPLNSPTFRILFDVDVVVKSSGFTPSTSITKSTTSWKDFAVAAIVRPKSAILTSTPSQTGESALED*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06SLm0067G18.1" strand="+"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="7"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="40096" stop="40296"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>198</number_coding_nucleotides>
                  <number_encoded_amino_acids>66</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LVTVNQKIIGILRFSTLEDRRFQFQELTEKFILIICHYRPSSQTWKCAYVQWNIHAGSHSSRMLYF*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06SLm0067G18.1" strand="+"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="8"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="38061" stop="38258"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>195</number_coding_nucleotides>
                  <number_encoded_amino_acids>65</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SFFSLNISNTILKCSSCSFFIFEYTNISSINTITKRSKYGLKIPFIKLMNAAGAFVKPKDITTNS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="37865" e_stop="38969"/>
            <exon e_start="39714" e_stop="40574"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.950" acc_prob="0.000" e_score="0.926"/>
          <exon-only e_score="0.964"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.926">
            <gDNA_exon_boundary e_start="37865" e_stop="38969" e_length="1105"/>
          </exon>
          <intron i_serial="1" don_prob="0.950" acc_prob="0.000">
            <gDNA_intron_boundary i_start="38970" i_stop="39713" i_length="744"/>
          </intron>
          <exon e_serial="2" e_score="0.964">
            <gDNA_exon_boundary e_start="39714" e_stop="40574" e_length="861"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37865" stop="38577"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E379315" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37865" stop="38460"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E375319" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37865" stop="38390"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E204434" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37936" stop="38615"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E368762" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37936" stop="38294"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E240817" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="38437" stop="38969"/>
              <exon start="39714" stop="39880"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E353359" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="39784" stop="40503"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E356614" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="39787" stop="40450"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E352401" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="40142" stop="40574"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E352180" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GAATCCCTTGACAAATCGGCGGTAGTAGCTAGCTAACCCAACAAAGCTCCTTATTTCTGACACATTAGTGGGTCTTACCCAATTCTTCACTGTCTCAATCTTAGAAGGATCCACCATCACTCCATCCTTAGAAACCACGTGCCCCAAGAAGGACACCGCATCTAGCCAAAACTCACACTTAGAGAACTTGGCATAAAGCTTTTTCTCCCTCAACATTTCCAATACCATTCTCAAATGCTCTTCATGTTCCTTCTTTATCTTTGAGTATACCAATATATCATCAATAAATACGATCACGAAGAGGTCCAAATATGGCTTAAAAATCCCGTTCATCAAGCTCATGAACGCAGCAGGGGCATTCGTAAAACCAAAGGACATCACTACAAATTCGTAATGCCCATACCTCGTTTGAAAAGCAGTCTTTGGTACATCCGTTGCCCGTATTTTCAATTGATGATAACCGGATCTCAAGTCAATCTTAGAGAAGACACAAGCACCTTGTAACTGATCGAACAAATCATCAATGCGGGGAAGAGGATACTTGTTCTTTATGGTTACCTTATTTAGTTGTCTGTAGTCTATACACATTCGAAAACTCCCATCCTTCTTCTTTACAAACAAAACCGTAGCACCCCAAGGAGATGCACTTGGTCTAATGAAGCCTTTGTTCAATAACTCTTGAAGTTGTGCTTTTAACTCTCTTAACTCCACGGGAGCCATTCTATAAGGGGGTATAGAAATGGGGCGAGTACCAGATTCAAGATCAATACAGAAGTCAATATCCCTATCCGGTGGCATACCAGGAAGATCTGCAGGGAACACATCCAGAAACTCACGAACTACTGAAACCGACTCAATCGAAGGTACTTGGGTAGTGTCATCCTTGAGATGTGCCAAGAAAGCTAAACACCCTTTACTAATCATTTTCTTAGCACGAAGAAAGGAGACGATTCGGACCGGATTGGAAGTGTAGTCACCCTCCCACACTAACGGATTTGTCCCAGGCTTGGCTAACGTCACCGTTTTAGCATTACAATCCAAGATTGCAAATTGCGGAGAAAGCCAAGTCATACCCAGAATTACGTCAAAATCAACCATTTCTAAG : AAGGATTTTGCCGTTGCCGCTATCGTAAGGCCGAAATCCGCAATTCTGACCTCAACCCCTTCACAAACCGGCGAATCCGCTCTTGAGGACTGAAACAGAGTTGAGTGGCATATCTGGATAGTGCACGAAACTTAGCCTCATAAGCATTAACCGACATCCTACCTTGCTCTAGGTTCAAGAACTCATCCCTTTTCCTATCCCTCAAAGTCCGGGGGATATAATTCTCCATAAACAAACTAGAGAATGAGGCCCAAGTCATAGGTGGTGCCTCTATTGGTTGACACTCGATATGTGACCGCCATCACATTTTGGCGTTCCCTTGAAACTGATAAGTCACAAACTCCACACCAAACCGTTCTACTATACCCATCTTGTGTAGTAACTCGTGACAGTCAACCAGAAAATCATAGGCATCCTCCGATTCAGCACCCTTGAAGACCGGAGGTTTCAATTTCAAGAACTTACTGAAAAGTTCATACTGATCATTTGTCATTATAGGCCCAGTAGTCAGACGTGGAAATGTGCCTATGTCCAATGGAACATCCATGCGGGGAGCCATAGTAGCCGCATGTTGTACTTCTGAAACCGGAGGTGTTGGCACAGAAAACACTGGAGGTGCCTGACCTTGATCAGATAACCCGCTAAGATAAGCCAGAACCTGATTGATCATCTCTGGGGTAGGTTGGGGTGGCATTTCCTCATTTTGCACTTGTTCAGTTTCCCCATCCTCCCCTTCTCTTATTACTTCCTCGGTCGGTGGAGAAGTCACTGCCCTAGTATCAGATGGGCTAGGTGCTTGTCCTCTCCCTCTAGAGGACGTCCTCCCACGACCTCTTCCACGGCCCCTTGCCGCTGTTCTTC</gDNA_template>
            <first_frame> E  S  L  D  K  S  A  V  V  A  S  *  P  N  K  A  P  Y  F  *  H  I  S  G  S  Y  P  I  L  H  C  L  N  L  R  R  I  H  H  H  S  I  L  R  N  H  V  P  Q  E  G  H  R  I  *  P  K  L  T  L  R  E  L  G  I  K  L  F  L  P  Q  H  F  Q  Y  H  S  Q  M  L  F  M  F  L  L  Y  L  *  V  Y  Q  Y  I  I  N  K  Y  D  H  E  E  V  Q  I  W  L  K  N  P  V  H  Q  A  H  E  R  S  R  G  I  R  K  T  K  G  H  H  Y  K  F  V  M  P  I  P  R  L  K  S  S  L  W  Y  I  R  C  P  Y  F  Q  L  M  I  T  G  S  Q  V  N  L  R  E  D  T  S  T  L  *  L  I  E  Q  I  I  N  A  G  K  R  I  L  V  L  Y  G  Y  L  I  *  L  S  V  V  Y  T  H  S  K  T  P  I  L  L  L  Y  K  Q  N  R  S  T  P  R  R  C  T  W  S  N  E  A  F  V  Q  *  L  L  K  L  C  F  *  L  S  *  L  H  G  S  H  S  I  R  G  Y  R  N  G  A  S  T  R  F  K  I  N  T  E  V  N  I  P  I  R  W  H  T  R  K  I  C  R  E  H  I  Q  K  L  T  N  Y  *  N  R  L  N  R  R  Y  L  G  S  V  I  L  E  M  C  Q  E  S  *  T  P  F  T  N  H  F  L  S  T  K  K  G  D  D  S  D  R  I  G  S  V  V  T  L  P  H  *  R  I  C  P  R  L  G  *  R  H  R  F  S  I  T  I  Q  D  C  K  L  R  R  K  P  S  H  T  Q  N  Y  V  K  I  N  H  F  *   : E  G  F  C  R  C  R  Y  R  K  A  E  I  R  N  S  D  L  N  P  F  T  N  R  R  I  R  S  *  G  L  K  Q  S  *  V  A  Y  L  D  S  A  R  N  L  A  S  *  A  L  T  D  I  L  P  C  S  R  F  K  N  S  S  L  F  L  S  L  K  V  R  G  I  *  F  S  I  N  K  L  E  N  E  A  Q  V  I  G  G  A  S  I  G  *  H  S  I  C  D  R  H  H  I  L  A  F  P  *  N  *  *  V  T  N  S  T  P  N  R  S  T  I  P  I  L  C  S  N  S  *  Q  S  T  R  K  S  *  A  S  S  D  S  A  P  L  K  T  G  G  F  N  F  K  N  L  L  K  S  S  Y  *  S  F  V  I  I  G  P  V  V  R  R  G  N  V  P  M  S  N  G  T  S  M  R  G  A  I  V  A  A  C  C  T  S  E  T  G  G  V  G  T  E  N  T  G  G  A  *  P  *  S  D  N  P  L  R  *  A  R  T  *  L  I  I  S  G  V  G  W  G  G  I  S  S  F  C  T  C  S  V  S  P  S  S  P  S  L  I  T  S  S  V  G  G  E  V  T  A  L  V  S  D  G  L  G  A  C  P  L  P  L  E  D  V  L  P  R  P  L  P  R  P  L  A  A  V  L  </first_frame>
            <second_frame>  N  P  L  T  N  R  R  *  *  L  A  N  P  T  K  L  L  I  S  D  T  L  V  G  L  T  Q  F  F  T  V  S  I  L  E  G  S  T  I  T  P  S  L  E  T  T  C  P  K  K  D  T  A  S  S  Q  N  S  H  L  E  N  L  A  *  S  F  F  S  L  N  I  S  N  T  I  L  K  C  S  S  C  S  F  F  I  F  E  Y  T  N  I  S  S  I  N  T  I  T  K  R  S  K  Y  G  L  K  I  P  F  I  K  L  M  N  A  A  G  A  F  V  K  P  K  D  I  T  T  N  S  *  C  P  Y  L  V  *  K  A  V  F  G  T  S  V  A  R  I  F  N  *  *  *  P  D  L  K  S  I  L  E  K  T  Q  A  P  C  N  *  S  N  K  S  S  M  R  G  R  G  Y  L  F  F  M  V  T  L  F  S  C  L  *  S  I  H  I  R  K  L  P  S  F  F  F  T  N  K  T  V  A  P  Q  G  D  A  L  G  L  M  K  P  L  F  N  N  S  *  S  C  A  F  N  S  L  N  S  T  G  A  I  L  *  G  G  I  E  M  G  R  V  P  D  S  R  S  I  Q  K  S  I  S  L  S  G  G  I  P  G  R  S  A  G  N  T  S  R  N  S  R  T  T  E  T  D  S  I  E  G  T  W  V  V  S  S  L  R  C  A  K  K  A  K  H  P  L  L  I  I  F  L  A  R  R  K  E  T  I  R  T  G  L  E  V  *  S  P  S  H  T  N  G  F  V  P  G  L  A  N  V  T  V  L  A  L  Q  S  K  I  A  N  C  G  E  S  Q  V  I  P  R  I  T  S  K  S  T  I  S  K  :  K  D  F  A  V  A  A  I  V  R  P  K  S  A  I  L  T  S  T  P  S  Q  T  G  E  S  A  L  E  D  *  N  R  V  E  W  H  I  W  I  V  H  E  T  *  P  H  K  H  *  P  T  S  Y  L  A  L  G  S  R  T  H  P  F  S  Y  P  S  K  S  G  G  Y  N  S  P  *  T  N  *  R  M  R  P  K  S  *  V  V  P  L  L  V  D  T  R  Y  V  T  A  I  T  F  W  R  S  L  E  T  D  K  S  Q  T  P  H  Q  T  V  L  L  Y  P  S  C  V  V  T  R  D  S  Q  P  E  N  H  R  H  P  P  I  Q  H  P  *  R  P  E  V  S  I  S  R  T  Y  *  K  V  H  T  D  H  L  S  L  *  A  Q  *  S  D  V  E  M  C  L  C  P  M  E  H  P  C  G  E  P  *  *  P  H  V  V  L  L  K  P  E  V  L  A  Q  K  T  L  E  V  P  D  L  D  Q  I  T  R  *  D  K  P  E  P  D  *  S  S  L  G  *  V  G  V  A  F  P  H  F  A  L  V  Q  F  P  H  P  P  L  L  L  L  L  P  R  S  V  E  K  S  L  P  *  Y  Q  M  G  *  V  L  V  L  S  L  *  R  T  S  S  H  D  L  F  H  G  P  L  P  L  F  F </second_frame>
            <third_frame>   I  P  *  Q  I  G  G  S  S  *  L  T  Q  Q  S  S  L  F  L  T  H  *  W  V  L  P  N  S  S  L  S  Q  S  *  K  D  P  P  S  L  H  P  *  K  P  R  A  P  R  R  T  P  H  L  A  K  T  H  T  *  R  T  W  H  K  A  F  S  P  S  T  F  P  I  P  F  S  N  A  L  H  V  P  S  L  S  L  S  I  P  I  Y  H  Q  *  I  R  S  R  R  G  P  N  M  A  *  K  S  R  S  S  S  S  *  T  Q  Q  G  H  S  *  N  Q  R  T  S  L  Q  I  R  N  A  H  T  S  F  E  K  Q  S  L  V  H  P  L  P  V  F  S  I  D  D  N  R  I  S  S  Q  S  *  R  R  H  K  H  L  V  T  D  R  T  N  H  Q  C  G  E  E  D  T  C  S  L  W  L  P  Y  L  V  V  C  S  L  Y  T  F  E  N  S  H  P  S  S  L  Q  T  K  P  *  H  P  K  E  M  H  L  V  *  *  S  L  C  S  I  T  L  E  V  V  L  L  T  L  L  T  P  R  E  P  F  Y  K  G  V  *  K  W  G  E  Y  Q  I  Q  D  Q  Y  R  S  Q  Y  P  Y  P  V  A  Y  Q  E  D  L  Q  G  T  H  P  E  T  H  E  L  L  K  P  T  Q  S  K  V  L  G  *  C  H  P  *  D  V  P  R  K  L  N  T  L  Y  *  S  F  S  *  H  E  E  R  R  R  F  G  P  D  W  K  C  S  H  P  P  T  L  T  D  L  S  Q  A  W  L  T  S  P  F  *  H  Y  N  P  R  L  Q  I  A  E  K  A  K  S  Y  P  E  L  R  Q  N  Q  P  F  L  R :   R  I  L  P  L  P  L  S  *  G  R  N  P  Q  F  *  P  Q  P  L  H  K  P  A  N  P  L  L  R  T  E  T  E  L  S  G  I  S  G  *  C  T  K  L  S  L  I  S  I  N  R  H  P  T  L  L  *  V  Q  E  L  I  P  F  P  I  P  Q  S  P  G  D  I  I  L  H  K  Q  T  R  E  *  G  P  S  H  R  W  C  L  Y  W  L  T  L  D  M  *  P  P  S  H  F  G  V  P  L  K  L  I  S  H  K  L  H  T  K  P  F  Y  Y  T  H  L  V  *  *  L  V  T  V  N  Q  K  I  I  G  I  L  R  F  S  T  L  E  D  R  R  F  Q  F  Q  E  L  T  E  K  F  I  L  I  I  C  H  Y  R  P  S  S  Q  T  W  K  C  A  Y  V  Q  W  N  I  H  A  G  S  H  S  S  R  M  L  Y  F  *  N  R  R  C  W  H  R  K  H  W  R  C  L  T  L  I  R  *  P  A  K  I  S  Q  N  L  I  D  H  L  W  G  R  L  G  W  H  F  L  I  L  H  L  F  S  F  P  I  L  P  F  S  Y  Y  F  L  G  R  W  R  S  H  C  P  S  I  R  W  A  R  C  L  S  S  P  S  R  G  R  P  P  T  T  S  S  T  A  P  C  R  C  S   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06SLm0067G18.1" strand="+"/>
                <serials PGL_serial="7" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="38592" stop="38837"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>243</number_coding_nucleotides>
                  <number_encoded_amino_acids>81</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GGIEMGRVPDSRSIQKSISLSGGIPGRSAGNTSRNSRTTETDSIEGTWVVSSLRCAKKAKHPLLIIFLARRKETIRTGLEV*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06SLm0067G18.1" strand="+"/>
                <serials PGL_serial="7" AGS_serial="2" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="38129" stop="38368"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>237</number_coding_nucleotides>
                  <number_encoded_amino_acids>79</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VYQYIINKYDHEEVQIWLKNPVHQAHERSRGIRKTKGHHYKFVMPIPRLKSSLWYIRCPYFQLMITGSQVNLREDTSTL*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06SLm0067G18.1" strand="+"/>
                <serials PGL_serial="7" AGS_serial="2" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="38838" stop="38969"/>
                    <exon start="39714" stop="39806"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>222</number_coding_nucleotides>
                  <number_encoded_amino_acids>74</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SPSHTNGFVPGLANVTVLALQSKIANCGESQVIPRITSKSTISKKDFAVAAIVRPKSAILTSTPSQTGESALED*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06SLm0067G18.1" strand="+"/>
                <serials PGL_serial="7" AGS_serial="2" PPS_serial="4"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="40351" stop="40572"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>222</number_coding_nucleotides>
                  <number_encoded_amino_acids>74</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PAKISQNLIDHLWGRLGWHFLILHLFSFPILPFSYYFLGRWRSHCPSIRWARCLSSPSRGRPPTTSSTAPCRCS</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06SLm0067G18.1" strand="+"/>
                <serials PGL_serial="7" AGS_serial="2" PPS_serial="5"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="40376" stop="40573"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>198</number_coding_nucleotides>
                  <number_encoded_amino_acids>66</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LIISGVGWGGISSFCTCSVSPSSPSLITSSVGGEVTALVSDGLGACPLPLEDVLPRPLPRPLAAVL</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06SLm0067G18.1" strand="+"/>
                <serials PGL_serial="7" AGS_serial="2" PPS_serial="6"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="40096" stop="40296"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>198</number_coding_nucleotides>
                  <number_encoded_amino_acids>66</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LVTVNQKIIGILRFSTLEDRRFQFQELTEKFILIICHYRPSSQTWKCAYVQWNIHAGSHSSRMLYF*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06SLm0067G18.1" strand="+"/>
                <serials PGL_serial="7" AGS_serial="2" PPS_serial="7"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="38061" stop="38258"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>195</number_coding_nucleotides>
                  <number_encoded_amino_acids>65</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SFFSLNISNTILKCSSCSFFIFEYTNISSINTITKRSKYGLKIPFIKLMNAAGAFVKPKDITTNS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="-" PGL_start="40867" PGL_stop="40581"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="40867" e_stop="40581"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.962"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.962">
            <gDNA_exon_boundary e_start="40867" e_stop="40581" e_length="287"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="40867" stop="40581"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E355114" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTAGGTTCGTTGGTCTCATCACACAAGAACCGGTCTAGTAGAGTCTTAAGGAACGGTAGGGGGACGCCTTTACTTTTCCTTGAGAGGCTATAAGACTTTAGGAAAAATTTCACTCTTTCATTCTTTCTTTCGTGCTACTACTTGAGTCCAATTGGTATCTAGGCGATACGAATTGGTATCTGACCATCTTCACTCTCTTTCGCAGATGGTTAGAACTAGAGCAACGACTACGCCAACACCAACATCGGCCAGACAAGAAACAACTAAGCCAGCCACTGGGGCTGTGG</gDNA_template>
            <first_frame> L  G  S  L  V  S  S  H  K  N  R  S  S  R  V  L  R  N  G  R  G  T  P  L  L  F  L  E  R  L  *  D  F  R  K  N  F  T  L  S  F  F  L  S  C  Y  Y  L  S  P  I  G  I  *  A  I  R  I  G  I  *  P  S  S  L  S  F  A  D  G  *  N  *  S  N  D  Y  A  N  T  N  I  G  Q  T  R  N  N  *  A  S  H  W  G  C   </first_frame>
            <second_frame>  *  V  R  W  S  H  H  T  R  T  G  L  V  E  S  *  G  T  V  G  G  R  L  Y  F  S  L  R  G  Y  K  T  L  G  K  I  S  L  F  H  S  F  F  R  A  T  T  *  V  Q  L  V  S  R  R  Y  E  L  V  S  D  H  L  H  S  L  S  Q  M  V  R  T  R  A  T  T  T  P  T  P  T  S  A  R  Q  E  T  T  K  P  A  T  G  A  V  </second_frame>
            <third_frame>   R  F  V  G  L  I  T  Q  E  P  V  *  *  S  L  K  E  R  *  G  D  A  F  T  F  P  *  E  A  I  R  L  *  E  K  F  H  S  F  I  L  S  F  V  L  L  L  E  S  N  W  Y  L  G  D  T  N  W  Y  L  T  I  F  T  L  F  R  R  W  L  E  L  E  Q  R  L  R  Q  H  Q  H  R  P  D  K  K  Q  L  S  Q  P  L  G  L  W </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C06SLm0067G18.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="-" PGL_start="42198" PGL_stop="41586"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="42198" e_stop="41586"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.927"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.927">
            <gDNA_exon_boundary e_start="42198" e_stop="41586" e_length="613"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="42198" stop="41586"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E347579" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AATAAAGAAAATAGAAAGAACAAGAGAGAGAGGGAGAATCGAACGAGAAGGGAGAAACAAAGCTTGGAGAAAAATTTGCTTGCTTGATCACTAATCTTCGGTGGAGGTAGGTTATGGTTTTCATGCTTTCATAGTAAACTCTTAATAGAGAATGATATGTATTGGTAGTATTGTAAACCCTACTATATGCTTAATTGTATGTTTGCATGAATATGATTGTGTGATTGTGATAAGATGAGCATGATGAAAATATTGAATCCCAAATCTTGAAAGGAAACTTTAATATACATTATTAATAATGATGCCTTGGTATAGAAGAAGGCTTGATGAATTAAAGTAATGGGATTGATGATGCCTTGGTATAGAGAAGGCCTGATGATTTACAGAATGATATTAGTGGATCGGGTGTCACGAACCGACACGTAGAATTAGGGGATCGGGTGTCACGAATCGACACGTAGAATTAGGGGATCGGGTGTCACGAACCGACACGTAGAATTAGGGGATCGGGTGTCACGAACCGACACGTAGAATTAGGGGATCAGGTGTCACAAACCGACACGTAGAATTAGGGGATCGGGTGTCACGAACCTACACGTAGAATATGAGGGAT</gDNA_template>
            <first_frame> N  K  E  N  R  K  N  K  R  E  R  E  N  R  T  R  R  E  K  Q  S  L  E  K  N  L  L  A  *  S  L  I  F  G  G  G  R  L  W  F  S  C  F  H  S  K  L  L  I  E  N  D  M  Y  W  *  Y  C  K  P  Y  Y  M  L  N  C  M  F  A  *  I  *  L  C  D  C  D  K  M  S  M  M  K  I  L  N  P  K  S  *  K  E  T  L  I  Y  I  I  N  N  D  A  L  V  *  K  K  A  *  *  I  K  V  M  G  L  M  M  P  W  Y  R  E  G  L  M  I  Y  R  M  I  L  V  D  R  V  S  R  T  D  T  *  N  *  G  I  G  C  H  E  S  T  R  R  I  R  G  S  G  V  T  N  R  H  V  E  L  G  D  R  V  S  R  T  D  T  *  N  *  G  I  R  C  H  K  P  T  R  R  I  R  G  S  G  V  T  N  L  H  V  E  Y  E  G  </first_frame>
            <second_frame>  I  K  K  I  E  R  T  R  E  R  G  R  I  E  R  E  G  R  N  K  A  W  R  K  I  C  L  L  D  H  *  S  S  V  E  V  G  Y  G  F  H  A  F  I  V  N  S  *  *  R  M  I  C  I  G  S  I  V  N  P  T  I  C  L  I  V  C  L  H  E  Y  D  C  V  I  V  I  R  *  A  *  *  K  Y  *  I  P  N  L  E  R  K  L  *  Y  T  L  L  I  M  M  P  W  Y  R  R  R  L  D  E  L  K  *  W  D  *  *  C  L  G  I  E  K  A  *  *  F  T  E  *  Y  *  W  I  G  C  H  E  P  T  R  R  I  R  G  S  G  V  T  N  R  H  V  E  L  G  D  R  V  S  R  T  D  T  *  N  *  G  I  G  C  H  E  P  T  R  R  I  R  G  S  G  V  T  N  R  H  V  E  L  G  D  R  V  S  R  T  Y  T  *  N  M  R  D </second_frame>
            <third_frame>   *  R  K  *  K  E  Q  E  R  E  G  E  S  N  E  K  G  E  T  K  L  G  E  K  F  A  C  L  I  T  N  L  R  W  R  *  V  M  V  F  M  L  S  *  *  T  L  N  R  E  *  Y  V  L  V  V  L  *  T  L  L  Y  A  *  L  Y  V  C  M  N  M  I  V  *  L  *  *  D  E  H  D  E  N  I  E  S  Q  I  L  K  G  N  F  N  I  H  Y  *  *  *  C  L  G  I  E  E  G  L  M  N  *  S  N  G  I  D  D  A  L  V  *  R  R  P  D  D  L  Q  N  D  I  S  G  S  G  V  T  N  R  H  V  E  L  G  D  R  V  S  R  I  D  T  *  N  *  G  I  G  C  H  E  P  T  R  R  I  R  G  S  G  V  T  N  R  H  V  E  L  G  D  Q  V  S  Q  T  D  T  *  N  *  G  I  G  C  H  E  P  T  R  R  I  *  G   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C06SLm0067G18.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="-" PGL_start="62808" PGL_stop="49929"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="62808" e_stop="62575"/>
            <exon e_start="62497" e_stop="62333"/>
            <exon e_start="61568" e_stop="61470"/>
            <exon e_start="61391" e_stop="61257"/>
            <exon e_start="61152" e_stop="61084"/>
            <exon e_start="60921" e_stop="60825"/>
            <exon e_start="60723" e_stop="60621"/>
            <exon e_start="55092" e_stop="54882"/>
            <exon e_start="54720" e_stop="54607"/>
            <exon e_start="54023" e_stop="53892"/>
            <exon e_start="50813" e_stop="50733"/>
            <exon e_start="50449" e_stop="50333"/>
            <exon e_start="50153" e_stop="49929"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.994" e_score="0.996"/>
          <exon-intron don_prob="0.999" acc_prob="0.962" e_score="1.000"/>
          <exon-intron don_prob="0.965" acc_prob="0.967" e_score="1.000"/>
          <exon-intron don_prob="0.944" acc_prob="0.819" e_score="0.993"/>
          <exon-intron don_prob="0.332" acc_prob="0.957" e_score="1.000"/>
          <exon-intron don_prob="0.990" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.974" acc_prob="0.983" e_score="1.000"/>
          <exon-intron don_prob="0.928" acc_prob="0.949" e_score="1.000"/>
          <exon-intron don_prob="0.448" acc_prob="0.991" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.975" e_score="1.000"/>
          <exon-intron don_prob="0.993" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.871" e_score="1.000"/>
          <exon-only e_score="0.996"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.996">
            <gDNA_exon_boundary e_start="62808" e_stop="62575" e_length="234"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.994">
            <gDNA_intron_boundary i_start="62574" i_stop="62498" i_length="77"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="62497" e_stop="62333" e_length="165"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.962">
            <gDNA_intron_boundary i_start="62332" i_stop="61569" i_length="764"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="61568" e_stop="61470" e_length="99"/>
          </exon>
          <intron i_serial="3" don_prob="0.965" acc_prob="0.967">
            <gDNA_intron_boundary i_start="61469" i_stop="61392" i_length="78"/>
          </intron>
          <exon e_serial="4" e_score="0.993">
            <gDNA_exon_boundary e_start="61391" e_stop="61257" e_length="135"/>
          </exon>
          <intron i_serial="4" don_prob="0.944" acc_prob="0.819">
            <gDNA_intron_boundary i_start="61256" i_stop="61153" i_length="104"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="61152" e_stop="61084" e_length="69"/>
          </exon>
          <intron i_serial="5" don_prob="0.332" acc_prob="0.957">
            <gDNA_intron_boundary i_start="61083" i_stop="60922" i_length="162"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="60921" e_stop="60825" e_length="97"/>
          </exon>
          <intron i_serial="6" don_prob="0.990" acc_prob="0.997">
            <gDNA_intron_boundary i_start="60824" i_stop="60724" i_length="101"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="60723" e_stop="60621" e_length="103"/>
          </exon>
          <intron i_serial="7" don_prob="0.974" acc_prob="0.983">
            <gDNA_intron_boundary i_start="60620" i_stop="55093" i_length="5528"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="55092" e_stop="54882" e_length="211"/>
          </exon>
          <intron i_serial="8" don_prob="0.928" acc_prob="0.949">
            <gDNA_intron_boundary i_start="54881" i_stop="54721" i_length="161"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="54720" e_stop="54607" e_length="114"/>
          </exon>
          <intron i_serial="9" don_prob="0.448" acc_prob="0.991">
            <gDNA_intron_boundary i_start="54606" i_stop="54024" i_length="583"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="54023" e_stop="53892" e_length="132"/>
          </exon>
          <intron i_serial="10" don_prob="0.999" acc_prob="0.975">
            <gDNA_intron_boundary i_start="53891" i_stop="50814" i_length="3078"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="50813" e_stop="50733" e_length="81"/>
          </exon>
          <intron i_serial="11" don_prob="0.993" acc_prob="1.000">
            <gDNA_intron_boundary i_start="50732" i_stop="50450" i_length="283"/>
          </intron>
          <exon e_serial="12" e_score="1.000">
            <gDNA_exon_boundary e_start="50449" e_stop="50333" e_length="117"/>
          </exon>
          <intron i_serial="12" don_prob="0.997" acc_prob="0.871">
            <gDNA_intron_boundary i_start="50332" i_stop="50154" i_length="179"/>
          </intron>
          <exon e_serial="13" e_score="0.996">
            <gDNA_exon_boundary e_start="50153" e_stop="49929" e_length="225"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62808" stop="62575"/>
              <exon start="62497" stop="62333"/>
              <exon start="61568" stop="61470"/>
              <exon start="61391" stop="61257"/>
              <exon start="61152" stop="61084"/>
              <exon start="60921" stop="60825"/>
              <exon start="60723" stop="60621"/>
              <exon start="55092" stop="54882"/>
              <exon start="54720" stop="54607"/>
              <exon start="54023" stop="53892"/>
              <exon start="50813" stop="50733"/>
              <exon start="50449" stop="50333"/>
              <exon start="50153" stop="49929"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E746416" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62778" stop="62575"/>
              <exon start="62497" stop="62333"/>
              <exon start="61568" stop="61470"/>
              <exon start="61391" stop="61296"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E442808" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TCCGTCTATTTGGGTTAGTCATATGAATTTGAGAAACCCAATTAGCCATTCAAAGAGTGGCAAAATGCAGATCTTGTGAGATTTTTGTGTGTTTGTATTCATTCGTTGATCGAGCATGAGATAGAGATGAATTTGTTGGGCAGAGATCGAATTGAGGCATTTGTTTCCATTTTCGTTACTCTTCTTCCTCACGAGCTCTCAGCATTGCTATACTCTTCCTCCACTTTTTTCTTC : ATTTTGAGCGCATACTTTGTGGTTCTTCCTTTACGTGATGAAGGAGCTATATCTTTGGGATTGGGGAATCTCCCCAGCTTGTTTGTGGGATCTTTGATACTCACACTCTTTGCTGCACCTCTTTCCACCTTAATCTTTTCATTGCCTAATCTTTCAAAGTCAAAG : GCTTTGGTCTTGATACACAGGTTTTTTGGGGTCACACTTGTTGCGTTCTACATCCTGTGGCTTTTTTCTACTCCTGGGAGTTCACCATTTAATATCAAG : GGACTGCTCTCTGTGTCCTCAACTTTAAAACAGGAGTTAAAAGTGGAGGTTAGTCACACGAATACTCCAAACTTGTCGAGTTGGAGCAACCATGGTTGGTTCTACGTGTCAGTGAGAATTGGCCTGTTTCTTTGG : GTTGCTTTGCTTAATCTTATTACTATATCTTCAACTTGGGCTAGAGTTATTGATGTGATGGATAGTGAG : TCAGGTTCAAGATTGTTTGGGTTTATTGGTGCTGGTGCTACACTAGGCCAGCTGTGTGGTTCGTTATTTGCCACAGGAATGGCTTGGTTAGGACCGT : ATTTACTTCTTGTTTCAGCGGTTCTCATGGAACTTGCTGCACAGTCATCAAAAGGAATCAAGAAAGACTTCTTACAACTTCCTGAAGAACTATCTCCAATCAG : GGAAGCTGATACCGATCAAGCTGAAGAGGCCGAGAATATACCAGGGCTCACACAGAGAACAACTTCCCCAAAATCTCCAGCTTCTGTAGCAAAGCCTCAGTTCTGGGCTATATTGGATGGGCTAAAGCTCATTCTTTCTTCGACTTACTTGTTGCATGTATCATTATTCCTCTGGCTGAGTGCAGTTGTGTCCTCCTTTTTTTACTTTCAG : AAAGTAACTGTTATTGCTGCTGCAGTAACAGATCCCACTGGTAGAAGAAGATTATTTGCACAGATCAATAGCTTCATTGCTATTTTTATCCTTGCTGGACAGCTCACTTTGACG : GGGCGCATCCTTACTTTTGCTGGTGTTACTCTAGCCATTTGCTCCGCACCTTTTGTTGCCTTTGCGAATCTAATTGCTTTAGCAGTATGGCCCACATGGATTGCAGTGGCCATCTCAGAAACCCTGAGGAAG : GTGGTCACATACGTCGTTACCAGGCCTGCAAGGGAGCTTCTTTTCACTGTTGTCTCACAGGACGAGAAGTATAAAGCAAAG : GTATGCATAGATGTGATTGTTCAAAGACTTGGGGATGCTACAGCAGCTGCAATGTACAAGCTACTCTTCAGCACTCTCAATGGCAAGGCATCAGCTGTTTCTCTATATGCCCTGCCT : GTCTGCTTGATGTGGATACTGACAGCATTTTATCTAGGACACCGGTACAGGCAACTAACTGCGGATCATCCCTCTCAACTTGTTGAAACATGTAGAAGATACGGAACATAATGCCAAACACGAAAAGTTTTTGTATCTTTCAGAACCTTTAATGGTAAAAATGCCTGTTTTCCTCCTTTTCTTCTTTGGATCAGTTTCCATTCAGAATGAAGCATGATCTCCCCT</gDNA_template>
            <first_frame> S  V  Y  L  G  *  S  Y  E  F  E  K  P  N  *  P  F  K  E  W  Q  N  A  D  L  V  R  F  L  C  V  C  I  H  S  L  I  E  H  E  I  E  M  N  L  L  G  R  D  R  I  E  A  F  V  S  I  F  V  T  L  L  P  H  E  L  S  A  L  L  Y  S  S  S  T  F  F  F  :  I  L  S  A  Y  F  V  V  L  P  L  R  D  E  G  A  I  S  L  G  L  G  N  L  P  S  L  F  V  G  S  L  I  L  T  L  F  A  A  P  L  S  T  L  I  F  S  L  P  N  L  S  K  S  K  :  A  L  V  L  I  H  R  F  F  G  V  T  L  V  A  F  Y  I  L  W  L  F  S  T  P  G  S  S  P  F  N  I  K  :  G  L  L  S  V  S  S  T  L  K  Q  E  L  K  V  E  V  S  H  T  N  T  P  N  L  S  S  W  S  N  H  G  W  F  Y  V  S  V  R  I  G  L  F  L  W  :  V  A  L  L  N  L  I  T  I  S  S  T  W  A  R  V  I  D  V  M  D  S  E  :  S  G  S  R  L  F  G  F  I  G  A  G  A  T  L  G  Q  L  C  G  S  L  F  A  T  G  M  A  W  L  G  P   : Y  L  L  L  V  S  A  V  L  M  E  L  A  A  Q  S  S  K  G  I  K  K  D  F  L  Q  L  P  E  E  L  S  P  I  R :   E  A  D  T  D  Q  A  E  E  A  E  N  I  P  G  L  T  Q  R  T  T  S  P  K  S  P  A  S  V  A  K  P  Q  F  W  A  I  L  D  G  L  K  L  I  L  S  S  T  Y  L  L  H  V  S  L  F  L  W  L  S  A  V  V  S  S  F  F  Y  F  Q  :  K  V  T  V  I  A  A  A  V  T  D  P  T  G  R  R  R  L  F  A  Q  I  N  S  F  I  A  I  F  I  L  A  G  Q  L  T  L  T  :  G  R  I  L  T  F  A  G  V  T  L  A  I  C  S  A  P  F  V  A  F  A  N  L  I  A  L  A  V  W  P  T  W  I  A  V  A  I  S  E  T  L  R  K  :  V  V  T  Y  V  V  T  R  P  A  R  E  L  L  F  T  V  V  S  Q  D  E  K  Y  K  A  K  :  V  C  I  D  V  I  V  Q  R  L  G  D  A  T  A  A  A  M  Y  K  L  L  F  S  T  L  N  G  K  A  S  A  V  S  L  Y  A  L  P  :  V  C  L  M  W  I  L  T  A  F  Y  L  G  H  R  Y  R  Q  L  T  A  D  H  P  S  Q  L  V  E  T  C  R  R  Y  G  T  *  C  Q  T  R  K  V  F  V  S  F  R  T  F  N  G  K  N  A  C  F  P  P  F  L  L  W  I  S  F  H  S  E  *  S  M  I  S  P </first_frame>
            <second_frame>  P  S  I  W  V  S  H  M  N  L  R  N  P  I  S  H  S  K  S  G  K  M  Q  I  L  *  D  F  C  V  F  V  F  I  R  *  S  S  M  R  *  R  *  I  C  W  A  E  I  E  L  R  H  L  F  P  F  S  L  L  F  F  L  T  S  S  Q  H  C  Y  T  L  P  P  L  F  S  S :   F  *  A  H  T  L  W  F  F  L  Y  V  M  K  E  L  Y  L  W  D  W  G  I  S  P  A  C  L  W  D  L  *  Y  S  H  S  L  L  H  L  F  P  P  *  S  F  H  C  L  I  F  Q  S  Q  R :   L  W  S  *  Y  T  G  F  L  G  S  H  L  L  R  S  T  S  C  G  F  F  L  L  L  G  V  H  H  L  I  S  R :   D  C  S  L  C  P  Q  L  *  N  R  S  *  K  W  R  L  V  T  R  I  L  Q  T  C  R  V  G  A  T  M  V  G  S  T  C  Q  *  E  L  A  C  F  F  G :   L  L  C  L  I  L  L  L  Y  L  Q  L  G  L  E  L  L  M  *  W  I  V  S :   Q  V  Q  D  C  L  G  L  L  V  L  V  L  H  *  A  S  C  V  V  R  Y  L  P  Q  E  W  L  G  *  D  R  :  I  Y  F  L  F  Q  R  F  S  W  N  L  L  H  S  H  Q  K  E  S  R  K  T  S  Y  N  F  L  K  N  Y  L  Q  S   : G  K  L  I  P  I  K  L  K  R  P  R  I  Y  Q  G  S  H  R  E  Q  L  P  Q  N  L  Q  L  L  *  Q  S  L  S  S  G  L  Y  W  M  G  *  S  S  F  F  L  R  L  T  C  C  M  Y  H  Y  S  S  G  *  V  Q  L  C  P  P  F  F  T  F  R :   K  *  L  L  L  L  L  Q  *  Q  I  P  L  V  E  E  D  Y  L  H  R  S  I  A  S  L  L  F  L  S  L  L  D  S  S  L  *  R :   G  A  S  L  L  L  L  V  L  L  *  P  F  A  P  H  L  L  L  P  L  R  I  *  L  L  *  Q  Y  G  P  H  G  L  Q  W  P  S  Q  K  P  *  G  R :   W  S  H  T  S  L  P  G  L  Q  G  S  F  F  S  L  L  S  H  R  T  R  S  I  K  Q  R :   Y  A  *  M  *  L  F  K  D  L  G  M  L  Q  Q  L  Q  C  T  S  Y  S  S  A  L  S  M  A  R  H  Q  L  F  L  Y  M  P  C  L :   S  A  *  C  G  Y  *  Q  H  F  I  *  D  T  G  T  G  N  *  L  R  I  I  P  L  N  L  L  K  H  V  E  D  T  E  H  N  A  K  H  E  K  F  L  Y  L  S  E  P  L  M  V  K  M  P  V  F  L  L  F  F  F  G  S  V  S  I  Q  N  E  A  *  S  P   </second_frame>
            <third_frame>   R  L  F  G  L  V  I  *  I  *  E  T  Q  L  A  I  Q  R  V  A  K  C  R  S  C  E  I  F  V  C  L  Y  S  F  V  D  R  A  *  D  R  D  E  F  V  G  Q  R  S  N  *  G  I  C  F  H  F  R  Y  S  S  S  S  R  A  L  S  I  A  I  L  F  L  H  F  F  L   : H  F  E  R  I  L  C  G  S  S  F  T  *  *  R  S  Y  I  F  G  I  G  E  S  P  Q  L  V  C  G  I  F  D  T  H  T  L  C  C  T  S  F  H  L  N  L  F  I  A  *  S  F  K  V  K   : G  F  G  L  D  T  Q  V  F  W  G  H  T  C  C  V  L  H  P  V  A  F  F  Y  S  W  E  F  T  I  *  Y  Q   : G  T  A  L  C  V  L  N  F  K  T  G  V  K  S  G  G  *  S  H  E  Y  S  K  L  V  E  L  E  Q  P  W  L  V  L  R  V  S  E  N  W  P  V  S  L   : G  C  F  A  *  S  Y  Y  Y  I  F  N  L  G  *  S  Y  *  C  D  G  *  *   : V  R  F  K  I  V  W  V  Y  W  C  W  C  Y  T  R  P  A  V  W  F  V  I  C  H  R  N  G  L  V  R  T  V :   F  T  S  C  F  S  G  S  H  G  T  C  C  T  V  I  K  R  N  Q  E  R  L  L  T  T  S  *  R  T  I  S  N  Q  :  G  S  *  Y  R  S  S  *  R  G  R  E  Y  T  R  A  H  T  E  N  N  F  P  K  I  S  S  F  C  S  K  A  S  V  L  G  Y  I  G  W  A  K  A  H  S  F  F  D  L  L  V  A  C  I  I  I  P  L  A  E  C  S  C  V  L  L  F  L  L  S   : E  S  N  C  Y  C  C  C  S  N  R  S  H  W  *  K  K  I  I  C  T  D  Q  *  L  H  C  Y  F  Y  P  C  W  T  A  H  F  D   : G  A  H  P  Y  F  C  W  C  Y  S  S  H  L  L  R  T  F  C  C  L  C  E  S  N  C  F  S  S  M  A  H  M  D  C  S  G  H  L  R  N  P  E  E   : G  G  H  I  R  R  Y  Q  A  C  K  G  A  S  F  H  C  C  L  T  G  R  E  V  *  S  K   : G  M  H  R  C  D  C  S  K  T  W  G  C  Y  S  S  C  N  V  Q  A  T  L  Q  H  S  Q  W  Q  G  I  S  C  F  S  I  C  P  A   : C  L  L  D  V  D  T  D  S  I  L  S  R  T  P  V  Q  A  T  N  C  G  S  S  L  S  T  C  *  N  M  *  K  I  R  N  I  M  P  N  T  K  S  F  C  I  F  Q  N  L  *  W  *  K  C  L  F  S  S  F  S  S  L  D  Q  F  P  F  R  M  K  H  D  L  P  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06SLm0067G18.1" strand="-"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="62763" stop="62575"/>
                    <exon start="62497" stop="62333"/>
                    <exon start="61568" stop="61470"/>
                    <exon start="61391" stop="61257"/>
                    <exon start="61152" stop="61084"/>
                    <exon start="60921" stop="60825"/>
                    <exon start="60723" stop="60621"/>
                    <exon start="55092" stop="54882"/>
                    <exon start="54720" stop="54607"/>
                    <exon start="54023" stop="53892"/>
                    <exon start="50813" stop="50733"/>
                    <exon start="50449" stop="50333"/>
                    <exon start="50153" stop="50043"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1620</number_coding_nucleotides>
                  <number_encoded_amino_acids>540</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PFKEWQNADLVRFLCVCIHSLIEHEIEMNLLGRDRIEAFVSIFVTLLPHELSALLYSSSTFFFILSAYFVVLPLRDEGAISLGLGNLPSLFVGSLILTLFAAPLSTLIFSLPNLSKSKALVLIHRFFGVTLVAFYILWLFSTPGSSPFNIKGLLSVSSTLKQELKVEVSHTNTPNLSSWSNHGWFYVSVRIGLFLWVALLNLITISSTWARVIDVMDSESGSRLFGFIGAGATLGQLCGSLFATGMAWLGPYLLLVSAVLMELAAQSSKGIKKDFLQLPEELSPIREADTDQAEEAENIPGLTQRTTSPKSPASVAKPQFWAILDGLKLILSSTYLLHVSLFLWLSAVVSSFFYFQKVTVIAAAVTDPTGRRRLFAQINSFIAIFILAGQLTLTGRILTFAGVTLAICSAPFVAFANLIALAVWPTWIAVAISETLRKVVTYVVTRPARELLFTVVSQDEKYKAKVCIDVIVQRLGDATAAAMYKLLFSTLNGKASAVSLYALPVCLMWILTAFYLGHRYRQLTADHPSQLVETCRRYGT*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="59506" e_stop="59468"/>
            <exon e_start="55092" e_stop="54882"/>
            <exon e_start="54720" e_stop="54607"/>
            <exon e_start="54023" e_stop="53892"/>
            <exon e_start="50813" e_stop="50733"/>
            <exon e_start="50449" e_stop="50374"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.970" acc_prob="0.983" e_score="0.923"/>
          <exon-intron don_prob="0.928" acc_prob="0.949" e_score="0.991"/>
          <exon-intron don_prob="0.448" acc_prob="0.991" e_score="0.939"/>
          <exon-intron don_prob="0.999" acc_prob="0.975" e_score="0.992"/>
          <exon-intron don_prob="0.993" acc_prob="1.000" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.923">
            <gDNA_exon_boundary e_start="59506" e_stop="59468" e_length="39"/>
          </exon>
          <intron i_serial="1" don_prob="0.970" acc_prob="0.983">
            <gDNA_intron_boundary i_start="59467" i_stop="55093" i_length="4375"/>
          </intron>
          <exon e_serial="2" e_score="0.991">
            <gDNA_exon_boundary e_start="55092" e_stop="54882" e_length="211"/>
          </exon>
          <intron i_serial="2" don_prob="0.928" acc_prob="0.949">
            <gDNA_intron_boundary i_start="54881" i_stop="54721" i_length="161"/>
          </intron>
          <exon e_serial="3" e_score="0.939">
            <gDNA_exon_boundary e_start="54720" e_stop="54607" e_length="114"/>
          </exon>
          <intron i_serial="3" don_prob="0.448" acc_prob="0.991">
            <gDNA_intron_boundary i_start="54606" i_stop="54024" i_length="583"/>
          </intron>
          <exon e_serial="4" e_score="0.992">
            <gDNA_exon_boundary e_start="54023" e_stop="53892" e_length="132"/>
          </exon>
          <intron i_serial="4" don_prob="0.999" acc_prob="0.975">
            <gDNA_intron_boundary i_start="53891" i_stop="50814" i_length="3078"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="50813" e_stop="50733" e_length="81"/>
          </exon>
          <intron i_serial="5" don_prob="0.993" acc_prob="1.000">
            <gDNA_intron_boundary i_start="50732" i_stop="50450" i_length="283"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="50449" e_stop="50374" e_length="76"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59506" stop="59468"/>
              <exon start="55092" stop="54882"/>
              <exon start="54720" stop="54607"/>
              <exon start="54023" stop="53892"/>
              <exon start="50813" stop="50733"/>
              <exon start="50449" stop="50374"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E559521" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ATTGATTATCCTTGTGTGAGCTTAAATCATTAGATGAAG : GGAAGCTGATACCGATCAAGCTGAAGAGGCCGAGAATATACCAGGGCTCACACAGAGAACAACTTCCCCAAAATCTCCAGCTTCTGTAGCAAAGCCTCAGTTCTGGGCTATATTGGATGGGCTAAAGCTCATTCTTTCTTCGACTTACTTGTTGCATGTATCATTATTCCTCTGGCTGAGTGCAGTTGTGTCCTCCTTTTTTTACTTTCAG : AAAGTAACTGTTATTGCTGCTGCAGTAACAGATCCCACTGGTAGAAGAAGATTATTTGCACAGATCAATAGCTTCATTGCTATTTTTATCCTTGCTGGACAGCTCACTTTGACG : GGGCGCATCCTTACTTTTGCTGGTGTTACTCTAGCCATTTGCTCCGCACCTTTTGTTGCCTTTGCGAATCTAATTGCTTTAGCAGTATGGCCCACATGGATTGCAGTGGCCATCTCAGAAACCCTGAGGAAG : GTGGTCACATACGTCGTTACCAGGCCTGCAAGGGAGCTTCTTTTCACTGTTGTCTCACAGGACGAGAAGTATAAAGCAAAG : GTATGCATAGATGTGATTGTTCAAAGACTTGGGGATGCTACAGCAGCTGCAATGTACAAGCTACTCTTCAGCACTC</gDNA_template>
            <first_frame> I  D  Y  P  C  V  S  L  N  H  *  M  K  :  G  S  *  Y  R  S  S  *  R  G  R  E  Y  T  R  A  H  T  E  N  N  F  P  K  I  S  S  F  C  S  K  A  S  V  L  G  Y  I  G  W  A  K  A  H  S  F  F  D  L  L  V  A  C  I  I  I  P  L  A  E  C  S  C  V  L  L  F  L  L  S   : E  S  N  C  Y  C  C  C  S  N  R  S  H  W  *  K  K  I  I  C  T  D  Q  *  L  H  C  Y  F  Y  P  C  W  T  A  H  F  D   : G  A  H  P  Y  F  C  W  C  Y  S  S  H  L  L  R  T  F  C  C  L  C  E  S  N  C  F  S  S  M  A  H  M  D  C  S  G  H  L  R  N  P  E  E   : G  G  H  I  R  R  Y  Q  A  C  K  G  A  S  F  H  C  C  L  T  G  R  E  V  *  S  K   : G  M  H  R  C  D  C  S  K  T  W  G  C  Y  S  S  C  N  V  Q  A  T  L  Q  H   </first_frame>
            <second_frame>  L  I  I  L  V  *  A  *  I  I  R  *  R :   E  A  D  T  D  Q  A  E  E  A  E  N  I  P  G  L  T  Q  R  T  T  S  P  K  S  P  A  S  V  A  K  P  Q  F  W  A  I  L  D  G  L  K  L  I  L  S  S  T  Y  L  L  H  V  S  L  F  L  W  L  S  A  V  V  S  S  F  F  Y  F  Q  :  K  V  T  V  I  A  A  A  V  T  D  P  T  G  R  R  R  L  F  A  Q  I  N  S  F  I  A  I  F  I  L  A  G  Q  L  T  L  T  :  G  R  I  L  T  F  A  G  V  T  L  A  I  C  S  A  P  F  V  A  F  A  N  L  I  A  L  A  V  W  P  T  W  I  A  V  A  I  S  E  T  L  R  K  :  V  V  T  Y  V  V  T  R  P  A  R  E  L  L  F  T  V  V  S  Q  D  E  K  Y  K  A  K  :  V  C  I  D  V  I  V  Q  R  L  G  D  A  T  A  A  A  M  Y  K  L  L  F  S  T  </second_frame>
            <third_frame>   *  L  S  L  C  E  L  K  S  L  D  E   : G  K  L  I  P  I  K  L  K  R  P  R  I  Y  Q  G  S  H  R  E  Q  L  P  Q  N  L  Q  L  L  *  Q  S  L  S  S  G  L  Y  W  M  G  *  S  S  F  F  L  R  L  T  C  C  M  Y  H  Y  S  S  G  *  V  Q  L  C  P  P  F  F  T  F  R :   K  *  L  L  L  L  L  Q  *  Q  I  P  L  V  E  E  D  Y  L  H  R  S  I  A  S  L  L  F  L  S  L  L  D  S  S  L  *  R :   G  A  S  L  L  L  L  V  L  L  *  P  F  A  P  H  L  L  L  P  L  R  I  *  L  L  *  Q  Y  G  P  H  G  L  Q  W  P  S  Q  K  P  *  G  R :   W  S  H  T  S  L  P  G  L  Q  G  S  F  F  S  L  L  S  H  R  T  R  S  I  K  Q  R :   Y  A  *  M  *  L  F  K  D  L  G  M  L  Q  Q  L  Q  C  T  S  Y  S  S  A  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06SLm0067G18.1" strand="-"/>
                <serials PGL_serial="10" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="59469" stop="59468"/>
                    <exon start="55092" stop="54882"/>
                    <exon start="54720" stop="54607"/>
                    <exon start="54023" stop="53892"/>
                    <exon start="50813" stop="50733"/>
                    <exon start="50449" stop="50375"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>615</number_coding_nucleotides>
                  <number_encoded_amino_acids>205</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>READTDQAEEAENIPGLTQRTTSPKSPASVAKPQFWAILDGLKLILSSTYLLHVSLFLWLSAVVSSFFYFQKVTVIAAAVTDPTGRRRLFAQINSFIAIFILAGQLTLTGRILTFAGVTLAICSAPFVAFANLIALAVWPTWIAVAISETLRKVVTYVVTRPARELLFTVVSQDEKYKAKVCIDVIVQRLGDATAAAMYKLLFST</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="+" PGL_start="80126" PGL_stop="81026"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="80126" e_stop="80753"/>
            <exon e_start="80855" e_stop="81026"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.949" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="80126" e_stop="80753" e_length="628"/>
          </exon>
          <intron i_serial="1" don_prob="0.949" acc_prob="0.999">
            <gDNA_intron_boundary i_start="80754" i_stop="80854" i_length="101"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="80855" e_stop="81026" e_length="172"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="80126" stop="80568"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E232729" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="80267" stop="80753"/>
              <exon start="80855" stop="81026"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E249164" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TAAGCTCCATAGAACTCACTTATGGATTACATTGGATATGATGTCGTTATTGTATTTTTTTTAATTCGTTTCAATTATTAATTTAATTGAATATGCAATTTTCAAATTTTAGTAGTATTTTTGAGGCAAAGACTCGGCTTTATTGGAGTAAGCCCCTAATCCGATTGAAGTTGAAATTTTCAGTTAGTGATAAGTGAAAAAAAGTATTTTGATATTGAAGTTGAGTGCTTAGTATCAACAGATTTAGGATTTTAAACCGAGCTTTTTTGGATAGTGACGATAGAGATTCACATATGATAGAGGAAGACATGTTATGAAGTTGATGAGTAGCAAATATTATACTTTGTTTACATGAGAAGTGAGTTTCTCATATGAACTATGCTTTCGGAGAAACATAATGAGAGAGATTGAATTTTCTCTAGGTTCAACATTGCGAATGGTCTGCTTATGGCTTGGTATGTGGTGTCACAATGATATTTTTCTAGAACTCTGAGGTCTTTGAAGAAATAAGAAGATCGTTAATCTTGGGTTAATTATCTATATGATTATCGACGAGATGACATGTGATTCTTCCAAGTTTTGAGGATGAACAAGTATGGCTTAGAACAAGCAGTAGCTGGAGGAGTTG : GATTTCAACAACAAAGAGATGAACGAGGAGTTGCTCAAGAAGAATAACGACAACATTAGATCATGATATATTGCAGACCCTTAAGTTTATAAAGAGTTGATTTAGTTTTTTGGATTTTCTTTCAATTAACGCAGGATAAAAAGGAAAAAATCTTATTCNNNNNNNNNNNNNN</gDNA_template>
            <first_frame> *  A  P  *  N  S  L  M  D  Y  I  G  Y  D  V  V  I  V  F  F  L  I  R  F  N  Y  *  F  N  *  I  C  N  F  Q  I  L  V  V  F  L  R  Q  R  L  G  F  I  G  V  S  P  *  S  D  *  S  *  N  F  Q  L  V  I  S  E  K  K  Y  F  D  I  E  V  E  C  L  V  S  T  D  L  G  F  *  T  E  L  F  W  I  V  T  I  E  I  H  I  *  *  R  K  T  C  Y  E  V  D  E  *  Q  I  L  Y  F  V  Y  M  R  S  E  F  L  I  *  T  M  L  S  E  K  H  N  E  R  D  *  I  F  S  R  F  N  I  A  N  G  L  L  M  A  W  Y  V  V  S  Q  *  Y  F  S  R  T  L  R  S  L  K  K  *  E  D  R  *  S  W  V  N  Y  L  Y  D  Y  R  R  D  D  M  *  F  F  Q  V  L  R  M  N  K  Y  G  L  E  Q  A  V  A  G  G  V   : G  F  Q  Q  Q  R  D  E  R  G  V  A  Q  E  E  *  R  Q  H  *  I  M  I  Y  C  R  P  L  S  L  *  R  V  D  L  V  F  W  I  F  F  Q  L  T  Q  D  K  K  E  K  I  L  F  F  F  F  F   </first_frame>
            <second_frame>  K  L  H  R  T  H  L  W  I  T  L  D  M  M  S  L  L  Y  F  F  *  F  V  S  I  I  N  L  I  E  Y  A  I  F  K  F  *  *  Y  F  *  G  K  D  S  A  L  L  E  *  A  P  N  P  I  E  V  E  I  F  S  *  *  *  V  K  K  S  I  L  I  L  K  L  S  A  *  Y  Q  Q  I  *  D  F  K  P  S  F  F  G  *  *  R  *  R  F  T  Y  D  R  G  R  H  V  M  K  L  M  S  S  K  Y  Y  T  L  F  T  *  E  V  S  F  S  Y  E  L  C  F  R  R  N  I  M  R  E  I  E  F  S  L  G  S  T  L  R  M  V  C  L  W  L  G  M  W  C  H  N  D  I  F  L  E  L  *  G  L  *  R  N  K  K  I  V  N  L  G  L  I  I  Y  M  I  I  D  E  M  T  C  D  S  S  K  F  *  G  *  T  S  M  A  *  N  K  Q  *  L  E  E  L  :  D  F  N  N  K  E  M  N  E  E  L  L  K  K  N  N  D  N  I  R  S  *  Y  I  A  D  P  *  V  Y  K  E  L  I  *  F  F  G  F  S  F  N  *  R  R  I  K  R  K  K  S  Y  S  F  F  F  F  </second_frame>
            <third_frame>   S  S  I  E  L  T  Y  G  L  H  W  I  *  C  R  Y  C  I  F  F  N  S  F  Q  L  L  I  *  L  N  M  Q  F  S  N  F  S  S  I  F  E  A  K  T  R  L  Y  W  S  K  P  L  I  R  L  K  L  K  F  S  V  S  D  K  *  K  K  V  F  *  Y  *  S  *  V  L  S  I  N  R  F  R  I  L  N  R  A  F  L  D  S  D  D  R  D  S  H  M  I  E  E  D  M  L  *  S  *  *  V  A  N  I  I  L  C  L  H  E  K  *  V  S  H  M  N  Y  A  F  G  E  T  *  *  E  R  L  N  F  L  *  V  Q  H  C  E  W  S  A  Y  G  L  V  C  G  V  T  M  I  F  F  *  N  S  E  V  F  E  E  I  R  R  S  L  I  L  G  *  L  S  I  *  L  S  T  R  *  H  V  I  L  P  S  F  E  D  E  Q  V  W  L  R  T  S  S  S  W  R  S  W :   I  S  T  T  K  R  *  T  R  S  C  S  R  R  I  T  T  T  L  D  H  D  I  L  Q  T  L  K  F  I  K  S  *  F  S  F  L  D  F  L  S  I  N  A  G  *  K  G  K  N  L  I  L  F  F  F  F </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C06SLm0067G18.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="-" PGL_start="82834" PGL_stop="81453"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="82834" e_stop="82706"/>
            <exon e_start="82611" e_stop="82495"/>
            <exon e_start="82320" e_stop="82072"/>
            <exon e_start="81816" e_stop="81749"/>
            <exon e_start="81665" e_stop="81453"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.745" acc_prob="0.000" e_score="0.922"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.889"/>
          <exon-intron don_prob="0.982" acc_prob="0.999" e_score="0.880"/>
          <exon-intron don_prob="0.922" acc_prob="0.919" e_score="0.956"/>
          <exon-only e_score="0.930"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.922">
            <gDNA_exon_boundary e_start="82834" e_stop="82706" e_length="129"/>
          </exon>
          <intron i_serial="1" don_prob="0.745" acc_prob="0.000">
            <gDNA_intron_boundary i_start="82705" i_stop="82612" i_length="94"/>
          </intron>
          <exon e_serial="2" e_score="0.889">
            <gDNA_exon_boundary e_start="82611" e_stop="82495" e_length="117"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="82494" i_stop="82321" i_length="174"/>
          </intron>
          <exon e_serial="3" e_score="0.880">
            <gDNA_exon_boundary e_start="82320" e_stop="82072" e_length="249"/>
          </exon>
          <intron i_serial="3" don_prob="0.982" acc_prob="0.999">
            <gDNA_intron_boundary i_start="82071" i_stop="81817" i_length="255"/>
          </intron>
          <exon e_serial="4" e_score="0.956">
            <gDNA_exon_boundary e_start="81816" e_stop="81749" e_length="68"/>
          </exon>
          <intron i_serial="4" don_prob="0.922" acc_prob="0.919">
            <gDNA_intron_boundary i_start="81748" i_stop="81666" i_length="83"/>
          </intron>
          <exon e_serial="5" e_score="0.930">
            <gDNA_exon_boundary e_start="81665" e_stop="81453" e_length="213"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82834" stop="82706"/>
              <exon start="82611" stop="82495"/>
              <exon start="82320" stop="82072"/>
              <exon start="81816" stop="81749"/>
              <exon start="81665" stop="81453"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E623285" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82275" stop="82072"/>
              <exon start="81816" stop="81749"/>
              <exon start="81665" stop="81453"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E546078" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GTCTGTTTATGGTCATCGTCTTAATCTTGCACTAAAAAACCTTCTACCGTTCACACAATGTTTACCTTTAACAGTGGATTACCGTAACAAAATTCCTCTTGCCCCCCAAAAAAATTATCAAACTAATAG : GCAGGCATCAGGGTTACTGCAACTTGTTGAAGGCTCTCATTTAACTATTGATGAGACTCAATCACAAGAAGAAAGACTTAATCCTATTGGGTTTGAGAATGCCAGAGTCCTGCAACG : CTTCTAGCCATTTTTTGTTAGGTTGAATATGACTTCACTTGTTATAAAATGGACATGCTTGTGGACATTCAGTTGCTAGTTCTTTCTGAGGGAAAATCCAATATACTCCCAACAAATTTGGTTTTACCATTTAGTTCATTATCACTAGATGTTGCTCAAGTTATTAAGATAGAAGTTCTGCAATCTTGGAGATGGTACCTGGCTACTATGAGATCATTGTCTCACTCTATTACGCAAGAGATGCAGAAG : GTGGTAGAAGATGACTTAGTAGCGGCTAGGTAGGCTGATAGAAGCTTACGTAGCCTAGATTTCAGCAG : GTTTCTGACAATGGGTCGTCTTATATCTCTAAGTTTTGGTGAAACCGCTTTAACACTTGAATATTGGCAAATGGCTAAAGAATTAGAGCGCCTCCGAATAGAGAGATTATAGGGCAGTTTGTAAAGCAGTTTCTTCACTTTGTATAAAAGATGATGTGCCTAATCCTGCAAGTTTTGCTGATAGAGTAGTGGACTGTTGTTCTGCTTAGCACT</gDNA_template>
            <first_frame> V  C  L  W  S  S  S  *  S  C  T  K  K  P  S  T  V  H  T  M  F  T  F  N  S  G  L  P  *  Q  N  S  S  C  P  P  K  K  L  S  N  *  *  :  A  G  I  R  V  T  A  T  C  *  R  L  S  F  N  Y  *  *  D  S  I  T  R  R  K  T  *  S  Y  W  V  *  E  C  Q  S  P  A  T  :  L  L  A  I  F  C  *  V  E  Y  D  F  T  C  Y  K  M  D  M  L  V  D  I  Q  L  L  V  L  S  E  G  K  S  N  I  L  P  T  N  L  V  L  P  F  S  S  L  S  L  D  V  A  Q  V  I  K  I  E  V  L  Q  S  W  R  W  Y  L  A  T  M  R  S  L  S  H  S  I  T  Q  E  M  Q  K  :  V  V  E  D  D  L  V  A  A  R  *  A  D  R  S  L  R  S  L  D  F  S  R :   F  L  T  M  G  R  L  I  S  L  S  F  G  E  T  A  L  T  L  E  Y  W  Q  M  A  K  E  L  E  R  L  R  I  E  R  L  *  G  S  L  *  S  S  F  F  T  L  Y  K  R  *  C  A  *  S  C  K  F  C  *  *  S  S  G  L  L  F  C  L  A   </first_frame>
            <second_frame>  S  V  Y  G  H  R  L  N  L  A  L  K  N  L  L  P  F  T  Q  C  L  P  L  T  V  D  Y  R  N  K  I  P  L  A  P  Q  K  N  Y  Q  T  N  R :   Q  A  S  G  L  L  Q  L  V  E  G  S  H  L  T  I  D  E  T  Q  S  Q  E  E  R  L  N  P  I  G  F  E  N  A  R  V  L  Q  R :   F  *  P  F  F  V  R  L  N  M  T  S  L  V  I  K  W  T  C  L  W  T  F  S  C  *  F  F  L  R  E  N  P  I  Y  S  Q  Q  I  W  F  Y  H  L  V  H  Y  H  *  M  L  L  K  L  L  R  *  K  F  C  N  L  G  D  G  T  W  L  L  *  D  H  C  L  T  L  L  R  K  R  C  R  R :   W  *  K  M  T  *  *  R  L  G  R  L  I  E  A  Y  V  A  *  I  S  A   : G  F  *  Q  W  V  V  L  Y  L  *  V  L  V  K  P  L  *  H  L  N  I  G  K  W  L  K  N  *  S  A  S  E  *  R  D  Y  R  A  V  C  K  A  V  S  S  L  C  I  K  D  D  V  P  N  P  A  S  F  A  D  R  V  V  D  C  C  S  A  *  H  </second_frame>
            <third_frame>   L  F  M  V  I  V  L  I  L  H  *  K  T  F  Y  R  S  H  N  V  Y  L  *  Q  W  I  T  V  T  K  F  L  L  P  P  K  K  I  I  K  L  I   : G  R  H  Q  G  Y  C  N  L  L  K  A  L  I  *  L  L  M  R  L  N  H  K  K  K  D  L  I  L  L  G  L  R  M  P  E  S  C  N   : A  S  S  H  F  L  L  G  *  I  *  L  H  L  L  *  N  G  H  A  C  G  H  S  V  A  S  S  F  *  G  K  I  Q  Y  T  P  N  K  F  G  F  T  I  *  F  I  I  T  R  C  C  S  S  Y  *  D  R  S  S  A  I  L  E  M  V  P  G  Y  Y  E  I  I  V  S  L  Y  Y  A  R  D  A  E   : G  G  R  R  *  L  S  S  G  *  V  G  *  *  K  L  T  *  P  R  F  Q  Q  :  V  S  D  N  G  S  S  Y  I  S  K  F  W  *  N  R  F  N  T  *  I  L  A  N  G  *  R  I  R  A  P  P  N  R  E  I  I  G  Q  F  V  K  Q  F  L  H  F  V  *  K  M  M  C  L  I  L  Q  V  L  L  I  E  *  W  T  V  V  L  L  S  T </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06SLm0067G18.1" strand="-"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="82299" stop="82072"/>
                    <exon start="81816" stop="81784"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>258</number_coding_nucleotides>
                  <number_encoded_amino_acids>86</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VEYDFTCYKMDMLVDIQLLVLSEGKSNILPTNLVLPFSSLSLDVAQVIKIEVLQSWRWYLATMRSLSHSITQEMQKVVEDDLVAAR*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06SLm0067G18.1" strand="-"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="82833" stop="82706"/>
                    <exon start="82611" stop="82495"/>
                    <exon start="82320" stop="82314"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>249</number_coding_nucleotides>
                  <number_encoded_amino_acids>83</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SVYGHRLNLALKNLLPFTQCLPLTVDYRNKIPLAPQKNYQTNRQASGLLQLVEGSHLTIDETQSQEERLNPIGFENARVLQRF*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="82537" e_stop="82488"/>
            <exon e_start="82313" e_stop="82072"/>
            <exon e_start="81816" e_stop="81749"/>
            <exon e_start="81665" e_stop="81453"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.991" acc_prob="0.000" e_score="0.820"/>
          <exon-intron don_prob="0.982" acc_prob="0.999" e_score="0.876"/>
          <exon-intron don_prob="0.922" acc_prob="0.919" e_score="0.956"/>
          <exon-only e_score="0.930"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.820">
            <gDNA_exon_boundary e_start="82537" e_stop="82488" e_length="50"/>
          </exon>
          <intron i_serial="1" don_prob="0.991" acc_prob="0.000">
            <gDNA_intron_boundary i_start="82487" i_stop="82314" i_length="174"/>
          </intron>
          <exon e_serial="2" e_score="0.876">
            <gDNA_exon_boundary e_start="82313" e_stop="82072" e_length="242"/>
          </exon>
          <intron i_serial="2" don_prob="0.982" acc_prob="0.999">
            <gDNA_intron_boundary i_start="82071" i_stop="81817" i_length="255"/>
          </intron>
          <exon e_serial="3" e_score="0.956">
            <gDNA_exon_boundary e_start="81816" e_stop="81749" e_length="68"/>
          </exon>
          <intron i_serial="3" don_prob="0.922" acc_prob="0.919">
            <gDNA_intron_boundary i_start="81748" i_stop="81666" i_length="83"/>
          </intron>
          <exon e_serial="4" e_score="0.930">
            <gDNA_exon_boundary e_start="81665" e_stop="81453" e_length="213"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82537" stop="82488"/>
              <exon start="82313" stop="82072"/>
              <exon start="81816" stop="81749"/>
              <exon start="81665" stop="81453"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E357257" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82275" stop="82072"/>
              <exon start="81816" stop="81749"/>
              <exon start="81665" stop="81453"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E546078" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GACTTAATCCTATTGGGTTTGAGAATGCCAGAGTCCTGCAACGGCAAAAG : CCATTTTTTGTTAGGTTGAATATGACTTCACTTGTTATAAAATGGACATGCTTGTGGACATTCAGTTGCTAGTTCTTTCTGAGGGAAAATCCAATATACTCCCAACAAATTTGGTTTTACCATTTAGTTCATTATCACTAGATGTTGCTCAAGTTATTAAGATAGAAGTTCTGCAATCTTGGAGATGGTACCTGGCTACTATGAGATCATTGTCTCACTCTATTACGCAAGAGATGCAGAAG : GTGGTAGAAGATGACTTAGTAGCGGCTAGGTAGGCTGATAGAAGCTTACGTAGCCTAGATTTCAGCAG : GTTTCTGACAATGGGTCGTCTTATATCTCTAAGTTTTGGTGAAACCGCTTTAACACTTGAATATTGGCAAATGGCTAAAGAATTAGAGCGCCTCCGAATAGAGAGATTATAGGGCAGTTTGTAAAGCAGTTTCTTCACTTTGTATAAAAGATGATGTGCCTAATCCTGCAAGTTTTGCTGATAGAGTAGTGGACTGTTGTTCTGCTTAGCACT</gDNA_template>
            <first_frame> D  L  I  L  L  G  L  R  M  P  E  S  C  N  G  K  S :   H  F  L  L  G  *  I  *  L  H  L  L  *  N  G  H  A  C  G  H  S  V  A  S  S  F  *  G  K  I  Q  Y  T  P  N  K  F  G  F  T  I  *  F  I  I  T  R  C  C  S  S  Y  *  D  R  S  S  A  I  L  E  M  V  P  G  Y  Y  E  I  I  V  S  L  Y  Y  A  R  D  A  E   : G  G  R  R  *  L  S  S  G  *  V  G  *  *  K  L  T  *  P  R  F  Q  Q  :  V  S  D  N  G  S  S  Y  I  S  K  F  W  *  N  R  F  N  T  *  I  L  A  N  G  *  R  I  R  A  P  P  N  R  E  I  I  G  Q  F  V  K  Q  F  L  H  F  V  *  K  M  M  C  L  I  L  Q  V  L  L  I  E  *  W  T  V  V  L  L  S  T </first_frame>
            <second_frame>  T  *  S  Y  W  V  *  E  C  Q  S  P  A  T  A  K   : A  I  F  C  *  V  E  Y  D  F  T  C  Y  K  M  D  M  L  V  D  I  Q  L  L  V  L  S  E  G  K  S  N  I  L  P  T  N  L  V  L  P  F  S  S  L  S  L  D  V  A  Q  V  I  K  I  E  V  L  Q  S  W  R  W  Y  L  A  T  M  R  S  L  S  H  S  I  T  Q  E  M  Q  K  :  V  V  E  D  D  L  V  A  A  R  *  A  D  R  S  L  R  S  L  D  F  S  R :   F  L  T  M  G  R  L  I  S  L  S  F  G  E  T  A  L  T  L  E  Y  W  Q  M  A  K  E  L  E  R  L  R  I  E  R  L  *  G  S  L  *  S  S  F  F  T  L  Y  K  R  *  C  A  *  S  C  K  F  C  *  *  S  S  G  L  L  F  C  L  A   </second_frame>
            <third_frame>   L  N  P  I  G  F  E  N  A  R  V  L  Q  R  Q  K  :  P  F  F  V  R  L  N  M  T  S  L  V  I  K  W  T  C  L  W  T  F  S  C  *  F  F  L  R  E  N  P  I  Y  S  Q  Q  I  W  F  Y  H  L  V  H  Y  H  *  M  L  L  K  L  L  R  *  K  F  C  N  L  G  D  G  T  W  L  L  *  D  H  C  L  T  L  L  R  K  R  C  R  R :   W  *  K  M  T  *  *  R  L  G  R  L  I  E  A  Y  V  A  *  I  S  A   : G  F  *  Q  W  V  V  L  Y  L  *  V  L  V  K  P  L  *  H  L  N  I  G  K  W  L  K  N  *  S  A  S  E  *  R  D  Y  R  A  V  C  K  A  V  S  S  L  C  I  K  D  D  V  P  N  P  A  S  F  A  D  R  V  V  D  C  C  S  A  *  H  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06SLm0067G18.1" strand="-"/>
                <serials PGL_serial="12" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="82299" stop="82072"/>
                    <exon start="81816" stop="81784"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>258</number_coding_nucleotides>
                  <number_encoded_amino_acids>86</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VEYDFTCYKMDMLVDIQLLVLSEGKSNILPTNLVLPFSSLSLDVAQVIKIEVLQSWRWYLATMRSLSHSITQEMQKVVEDDLVAAR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 162 chains have been computed
$ 
$ memory statistics:
$ 119456 bytes spliced alignments in total
$ 48 spliced alignments have been stored
$ 2488 bytes was the average size of a spliced alignment
$ 20256 bytes predicted gene locations in total
$ 12 predicted gene locations have been stored
$ 1688 bytes was the average size of a predicted gene location
$ 0 megabytes was the average size of the backtrace matrix
$ 186 backtrace matrices have been allocated
$ 
$ date finished: 2009-01-16 23:24:03
-->
