<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-01-16 20:59:48"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C06SLm0135H21-7s2vm/GenomeThreader_SGN_U_tomato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C06SLm0135H21-7s2vm/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0135H21-7s2vm/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U328021" ref_strand="+" ref_description="SGN-U328021        Tomato 200607 #1 [3 ESTs aligned] arabidopsis/peptide: | Symbol: None | expressed protein | chr5:8793021-8794787 FORWARD | Aliases: F18G18.80, F18G18_80(evalue: 4e-33, score=139) genbank/nr: gi|26450559|dbj|BAC42392.1| unknown protein [Arabidopsis thaliana](evalue: 3e-33, score=145)">
      <seq>ttaaatataataataataataattctaaaacaataacaacactaatattagaaaacttaaggagatcaaattagaggtctttaaaatggtgatgttatgaatcaaatataattttagtttactacttataaatggtgtactagttatggaagttttaaagagggatgaagaagatgttagtcctagattttcatttcaaaagaatgtatcatcattgtcttgtgtagtaccaccattcttgctcagcccacaaaagagcttgcactacaacaagttacctgaggaaccgctcaatctcacagtactcaaattggatggctcttcctttgatattaaagttgcaaggaatgggacagtggcggagctgaaacaggcggtggaatctgccttcagtcattttccaaagacaggaacaggcaaggtttcatggtcacatttatggggacatttttgcttgagctacgatgggcggaagctacttactgataatgatttgttaggaacctatcggatcaaggatggcgataagctcagttttatgaggcatgtctccatcagttacaatctggtcaaaacgcgatcagagaaagaggactctagtaagaatgaacctagcatatcaaaaggctgtgaaagcagacaacggagaggagaacgagagggtaatcaccatcaagatgacttatcagagaaccaaaacaatattcatgacaacaacaggggtgttgcagctaattgtgagtccaggctggtccatttgtttagagggtggctcccatacaaattgacaagcccagagaagagaatgaaacagaagagcaggacatcgagttcacgcgatggtttacttatggagttctaacagtgttgtgctgtgattagtacttttgaaagagaggaattcatcaactgtttgcaaatgtcnaagagagttggagaaagtaaagctctaaacttttgagtatccagtgactttagtgtccaacctgattctgtaaacaagatcagttgcctgcctatgcatctcctctatttcttcatttgcatatcaaaattaattgtgtaaaccccttggtcatagaaacaacaaatccccaattatcaaacttgaaactctgcattcaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0135H21-7s2vm/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06SLm0135H21.1" temp_strand="+" temp_description="C06SLm0135H21.1  AC216666.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0135H21 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="2067" stop="5922"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="2367" g_stop="2695" g_length="329"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="329" r_length="329" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="2696" i_stop="3557" i_length="862">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="3558" g_stop="3657" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="330" r_stop="429" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="3658" i_stop="3826" i_length="169">
            <donor d_prob="0.965" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="3827" g_stop="3926" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="430" r_stop="529" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="3927" i_stop="4616" i_length="690">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="4617" g_stop="4705" g_length="89"/>
          <reference_exon_boundary r_type="cDNA" r_start="530" r_stop="618" r_length="89" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="4706" i_stop="5115" i_length="410">
            <donor d_prob="0.966" d_score="1.00"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="5116" g_stop="5622" g_length="507"/>
          <reference_exon_boundary r_type="cDNA" r_start="619" r_stop="1123" r_length="505" r_score="0.974"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="1124" polyA_stop="1134"/>
      <MATCH_line gen_id="C06SLm0135H21.1" gen_strand="+" ref_id="SGN-U328021" ref_strand="+">
        <total_alignment_score>0.988</total_alignment_score>
        <cumulative_length_of_scored_exons>1125</cumulative_length_of_scored_exons>
        <coverage percentage="0.992" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0135H21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U328021" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="2367" e_stop="2695"/>
          <exon e_start="3558" e_stop="3657"/>
          <exon e_start="3827" e_stop="3926"/>
          <exon e_start="4617" e_stop="4705"/>
          <exon e_start="5116" e_stop="5622"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTAAATATAATAATAATAATAATTCTAAAACAATAACAACACTAATATTAGAAAACTTAAGGAGATCAAATTAGAGGTCTTTAAAATGGTGATGTTATGAATCAAATATAATTTTAGTTTACTACTTATAAATGGTGTACTAGTTATGGAAGTTTTAAAGAGGGATGAAGAAGATGTTAGTCCTAGATTTTCATTTCAAAAGAATGTATCATCATTGTCTTGTGTAGTACCACCATTCTTGCTCAGCCCACAAAAGAGCTTGCACTACAACAAGTTACCTGAGGAACCGCTCAATCTCACAGTACTCAAATTGGATGGCTCTTCCTTTGGTAATTTTTATTATTTTCCTCCTCATGTTCAATTGTCTTGTCAAATACTGAAATTGATTTCCATCTATATGTGTCTGTATAGACGACGAAATTCAGGATTTAGAGTCAGTGAGTTCAAATAGTACTGAAATTCATGTGTGTATGCCCTTAGAAATGGATCTAGAATTCAAAGATTAGTATTTTTTATGTGTGTATATTTTTTTTTAATAATTGGGGCTAGGGAAATGGGATGGGATTACAAGGTAGGGGAATGATTCCTACCCGAGGTCATAGTTCAAGTAGCCAACTAATTGGCCTACTAATATACAATCTTTGAGCCAGAAATTTTGCAAAAGGTGTGCGAATTTTCTTCTCAATTGTGTTAAGGGGGTGCTAAATTAAATATACACTCACAATAGCTAGCATTTAACCTCTGTATGCCACATAATTTTCAAGAGTGTGCACCAAACCATCCTTCACCTAAGATGGCTCCGCCCATGTACATATATGTATATGATATTTTAACACGTATGCATGGTTTGAGTCAAAGATAGTAGGACATTAGGTGCTATCACACTTACTCTATACTACGTAGTTTGATCCACTTGTGGAGCGCTAGTATTGATGTATTCAGGGGCGGAGCTAGCTTGGAGGAAGGGGAATTAAAATCCCTTCACTATTATGCAAATAGGGTAACAGGTAGTCCTTTTATTTTGTGTTGTTTTGTTATATACAAGTTTTCGAACGCCCTTGCACATGAGAATTCTTTTAGTGGAGTGGCAAAGGGGGTTCAAAAATTGCTTTAGGTAGCAGGCTTCATCATTAGTGATGTATCATATGTTTTCTTCAAATGGTCAGATCAATTGAATTTTGTGTCGTGCAGATATTAAAGTTGCAAGGAATGGGACAGTGGCGGAGCTGAAACAGGCGGTGGAATCTGCCTTCAGTCATTTTCCAAAGACAGGAACAGGCAAGGTTTCATGGTATGTGCATTGCTAAAGGAAACTTTCAAACTAAACTTCTTCTGTTGTAGATTGCTTGAGACTTATACTTCGATTTCTATCTAATGTAATTTGCATAGCTGTTTCACTGTATATTACCTTGGCTAGTTCTTTCGAATTTTTCACTAGTTTTATTGTGAAAATATTACAGGTCACATTTATGGGGACATTTTTGCTTGAGCTACGATGGGCGGAAGCTACTTACTGATAATGATTTGTTAGGAACCTATCGGATCAAGGATGGCGATAAGGTTTCTTCTCATTCATCATATTTTCGATCTAGGAAAGTTCTCTTTTATCTAATCTTTATATGATTTGCTTATGTTACTTGTTGCTAAACGCATTAGAATATGCAATTTGTAAAAGGAGATGTATAGGCTTTGAAGAAAATTGATTCTTTTTTAGCCAAATCAGAATCTTGACTTCTGCAATTGAATGTGTGTGGTTCGATATATTTCCGTTTATTTAGAAATTAATAAGCTCCTTCGAGTACATCTTCGTTAGCAGATAATTCTGAATGCACTTTAAAGAGGTGAAAATGGTCTGAAGAGAGACCTGTAAAAAAGCAGGTTCAATTACTAAGGTATCGAAGGCTCTAAGGAGATTCTGGTTCATATGAATTCTCTCAACCAAAAGAAACAGATTTATCATCAAAATATTTTAGATAATCGTGAAAATGTAAGGTTGCTCAATGTAGACAGATTTTCTCATGGTGTTTGCATATAGCCAGAGGCTGTGGTTTCTTTCACTAGACTGATTATTAATCCGATTTTGTCTGTATTCTGGTTTATGAGAGAGTTCAGCAATTTCTATCCACTTTGGAGTTAAGAACTTTTCAGATCATTGCTAACGATTATGTACTTCTTTTCGTTATAAATCCCAAGTGGATTTGTTTTAACATTTCCTTAACGCACTAACTCTTGATGTTTTTGCATGTGCAGCTCAGTTTTATGAGGCATGTCTCCATCAGTTACAATCTGGTCAAAACGCGATCAGAGAAAGAGGACTCTAGTAAGAATGAACCTAGCATGTAAGATATGTATATTGTTGGTTCATGTGTTCTAATATTGCACTTTACCCATGCCTGTTATGGTATTGTTTGCTATCGATGCTTGATTCTTCCATAGATTCCAAAACAGTTCTTCTCGGCCTAAGTTGCTGGAGACACTTGGTCATAAAAGTTGAATCTTGTTCATCTAGGTGTTCCCATACATAGTTTCTAATACTAGAATATTGTCATTTATATGTTCCATTTATAGTTTCTGTGTCGAATTCTTGCCAGTACTGCTCATCATCATACATATATAAACCTGGCTATGTCACTTTGTGTGATCATGCAGAGTTTTATGCATATTTTTATGAAATGTTCACTATATGTATTGCATAAGTGGTATCGTAAGGGCACATAGATAACATCATCTTTGAAAATGCATTTTGCAGATCAAAAGGCTGTGAAAGCAGACAACGGAGAGGAGAACGAGAGGGTAATCACCATCAAGATGACTTATCAGAGAACCAAAACAATATTCATGACAACAACAGGGGTGTTGCAGCTAATTGTGAGTCCAGGCTGGTCCATTTGTTTAGAGGGTGGCTCCCATACAAATTGACAAGCCCAGAGAAGAGAATGAAACAGAAGAGCAGGACATCGAGTTCACGCGATGGTTTACTTATGGAGTTCTAACAGTGTTGTGCTGTGATTAGTACTTTTGAAAGAGAGGAATTCATCAACTGTTTGCAAATGTCAAAGAGAGTTGGAGAAGTTAAAGCTCTAAACTTTTGAGTATCCAGTGACTTTAGTGTCCAACCTGATTCTGTAAACAAGATCAGTTGCCTGCCTATGCATCTCTTCTATTTCTTCATTTTGCATATCAAAATTAATTGTGTAGAACACTTGGTCATTAGAAACAACAAATCCACAATTATCAGACTTGAACTTCTGCATTC</genome_strand>
        <mrna_strand>TTAAATATAATAATAATAATAATTCTAAAACAATAACAACACTAATATTAGAAAACTTAAGGAGATCAAATTAGAGGTCTTTAAAATGGTGATGTTATGAATCAAATATAATTTTAGTTTACTACTTATAAATGGTGTACTAGTTATGGAAGTTTTAAAGAGGGATGAAGAAGATGTTAGTCCTAGATTTTCATTTCAAAAGAATGTATCATCATTGTCTTGTGTAGTACCACCATTCTTGCTCAGCCCACAAAAGAGCTTGCACTACAACAAGTTACCTGAGGAACCGCTCAATCTCACAGTACTCAAATTGGATGGCTCTTCCTTTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTAAAGTTGCAAGGAATGGGACAGTGGCGGAGCTGAAACAGGCGGTGGAATCTGCCTTCAGTCATTTTCCAAAGACAGGAACAGGCAAGGTTTCATG.........................................................................................................................................................................GTCACATTTATGGGGACATTTTTGCTTGAGCTACGATGGGCGGAAGCTACTTACTGATAATGATTTGTTAGGAACCTATCGGATCAAGGATGGCGATAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCAGTTTTATGAGGCATGTCTCCATCAGTTACAATCTGGTCAAAACGCGATCAGAGAAAGAGGACTCTAGTAAGAATGAACCTAGCAT..........................................................................................................................................................................................................................................................................................................................................................................................................................ATCAAAAGGCTGTGAAAGCAGACAACGGAGAGGAGAACGAGAGGGTAATCACCATCAAGATGACTTATCAGAGAACCAAAACAATATTCATGACAACAACAGGGGTGTTGCAGCTAATTGTGAGTCCAGGCTGGTCCATTTGTTTAGAGGGTGGCTCCCATACAAATTGACAAGCCCAGAGAAGAGAATGAAACAGAAGAGCAGGACATCGAGTTCACGCGATGGTTTACTTATGGAGTTCTAACAGTGTTGTGCTGTGATTAGTACTTTTGAAAGAGAGGAATTCATCAACTGTTTGCAAATGTCNAAGAGAGTTGGAGAAAGTAAAGCTCTAAACTTTTGAGTATCCAGTGACTTTAGTGTCCAACCTGATTCTGTAAACAAGATCAGTTGCCTGCCTATGCATCTCCTCTATTTCTTCA-TTTGCATATCAAAATTAATTGTGTAAACCCCTTGGTCA-TAGAAACAACAAATCCCCAATTATCAAACTTGAAACTCTGCATTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0135H21-7s2vm/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U313789" ref_strand="+" ref_description="SGN-U313789        Tomato 200607 #1 [53 ESTs aligned] arabidopsis/peptide: | Symbol: None | ATP synthase family, contains Pfam profile: PF00430 ATP synthase B/B' CF(0); identical to cDNA chloroplast ATP synthase beta chain precursor (atpG) GI:5730140 | chr4:15573643-15574743 REVERSE | Aliases: F10M6.100, F10M6_100(evalue: 3e-47, score=185) genbank/nr: gi|394755|emb|CAA50520.1| CF(o)II ATP synthase subunit 9 [Spinacia oleracea] >gi|461595|sp|P31853|ATPX_SPIOL ATP synthase B' chain, chloroplast precursor (Subunit II) (evalue: 3e-47, score=191)">
      <seq>aaaatcaagaaccgaacctctcaaaaaaagatttgttttttttacaactgcaaaatcccaagttgaagaagaagaagccatggccaacatgatgatgagctcctccaaagttttaatcacttcttcatcctccaccatccctccatcaccaagattcaaactttccctcacccaaatcccttttccaaaactacccctccccaaatcacccaaatcccttgaaaccctttcaatcccatcaactctcaagtccatttctgtcattcttgcaagctcattggccatggcaccaccttcgctagcagaggaaattgaaaaagcttccctttttgacttcaacttgacactcccaatcatgatggctgaattcctctttctcatgtttgctttagacaagatttacttcagcccattagggaaattcatggatgaaagagattctgccattaaggagaaattgagcagtgtgaaggacacctctgctgaagtgaagcaactggaagaccaggctgctgcaattatgaaggctgcaagggctgagatatcagcagcattgaacaagatgaagaaagagactcagcaagaagtagagcagaagattgcagaaggaaggaagaaagttgaggctgaattgcaagaagctttggctagcttagagagtcaaaaggaggagacaatcaagagtcttgattctcagattgctgcccttagtgatgagattgtcaagaaagtccttcctgtcagtaactaattctgaaaagttgtaatgtctttttcttgggattggtaagagttaacagcttgtttggatggatgcttcttacatgtaatattgtaccgtgttgttagtttaaatacaaatgtttattttgattgttcattaaaaaaaaaaaaaaaaaactcg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0135H21-7s2vm/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06SLm0135H21.1" temp_strand="+" temp_description="C06SLm0135H21.1  AC216666.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0135H21 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="5984" stop="7488"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="6284" g_stop="7184" g_length="901"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="901" r_length="901" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0135H21.1" gen_strand="+" ref_id="SGN-U313789" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>901</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0135H21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U313789" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="6284" e_stop="7184"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAATCAAGAACCGAACCTCTCAAAAAAAGATTTGTTTTTTTTACAACTGCAAAATCCCAAGTTGAAGAAGAAGAAGCCATGGCCAACATGATGATGAGCTCCTCCAAAGTTTTAATCACTTCTTCATCCTCCACCATCCCTCCATCACCAAGATTCAAACTTTCCCTCACCCAAATCCCTTTTCCAAAACTACCCCTCCCCAAATCACCCAAATCCCTTGAAACCCTTTCAATCCCATCAACTCTCAAGTCCATTTCTGTCATTCTTGCAAGCTCATTGGCCATGGCACCACCTTCGCTAGCAGAGGAAATTGAAAAAGCTTCCCTTTTTGACTTCAACTTGACACTCCCAATCATGATGGCTGAATTCCTCTTTCTCATGTTTGCTTTAGACAAGATTTACTTCAGCCCATTAGGGAAATTCATGGATGAAAGAGATTCTGCCATTAAGGAGAAATTGAGCAGTGTGAAGGACACCTCTGCTGAAGTGAAGCAACTGGAAGACCAGGCTGCTGCAATTATGAAGGCTGCAAGGGCTGAGATATCAGCAGCATTGAACAAGATGAAGAAAGAGACTCAGCAAGAAGTAGAGCAGAAGATTGCAGAAGGAAGGAAGAAAGTTGAGGCTGAATTGCAAGAAGCTTTGGCTAGCTTAGAGAGTCAAAAGGAGGAGACAATCAAGAGTCTTGATTCTCAGATTGCTGCCCTTAGTGATGAGATTGTCAAGAAAGTCCTTCCTGTCAGTAACTAATTCTGAAAAGTTGTAATGTCTTTTTCTTGGGATTGGTAAGAGTTAACAGCTTGTTTGGATGGATGCTTCTTACATGTAATATTGTACCGTGTTGTTAGTTTAAATACAAATGTTTATTTTGATTGTTCATTATATCATATCATCAAATCC</genome_strand>
        <mrna_strand>AAAATCAAGAACCGAACCTCTCAAAAAAAGATTTGTTTTTTTTACAACTGCAAAATCCCAAGTTGAAGAAGAAGAAGCCATGGCCAACATGATGATGAGCTCCTCCAAAGTTTTAATCACTTCTTCATCCTCCACCATCCCTCCATCACCAAGATTCAAACTTTCCCTCACCCAAATCCCTTTTCCAAAACTACCCCTCCCCAAATCACCCAAATCCCTTGAAACCCTTTCAATCCCATCAACTCTCAAGTCCATTTCTGTCATTCTTGCAAGCTCATTGGCCATGGCACCACCTTCGCTAGCAGAGGAAATTGAAAAAGCTTCCCTTTTTGACTTCAACTTGACACTCCCAATCATGATGGCTGAATTCCTCTTTCTCATGTTTGCTTTAGACAAGATTTACTTCAGCCCATTAGGGAAATTCATGGATGAAAGAGATTCTGCCATTAAGGAGAAATTGAGCAGTGTGAAGGACACCTCTGCTGAAGTGAAGCAACTGGAAGACCAGGCTGCTGCAATTATGAAGGCTGCAAGGGCTGAGATATCAGCAGCATTGAACAAGATGAAGAAAGAGACTCAGCAAGAAGTAGAGCAGAAGATTGCAGAAGGAAGGAAGAAAGTTGAGGCTGAATTGCAAGAAGCTTTGGCTAGCTTAGAGAGTCAAAAGGAGGAGACAATCAAGAGTCTTGATTCTCAGATTGCTGCCCTTAGTGATGAGATTGTCAAGAAAGTCCTTCCTGTCAGTAACTAATTCTGAAAAGTTGTAATGTCTTTTTCTTGGGATTGGTAAGAGTTAACAGCTTGTTTGGATGGATGCTTCTTACATGTAATATTGTACCGTGTTGTTAGTTTAAATACAAATGTTTATTTTGATTGTTCATTAAAAAAAAAAAAAAAAAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0135H21-7s2vm/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U313788" ref_strand="+" ref_description="SGN-U313788        Tomato 200607 #1 [12 ESTs aligned] arabidopsis/peptide: | Symbol: None | ATP synthase family, contains Pfam profile: PF00430 ATP synthase B/B' CF(0); identical to cDNA chloroplast ATP synthase beta chain precursor (atpG) GI:5730140 | chr4:15573643-15574743 REVERSE | Aliases: F10M6.100, F10M6_100(evalue: 2e-47, score=185) genbank/nr: gi|394755|emb|CAA50520.1| CF(o)II ATP synthase subunit 9 [Spinacia oleracea] >gi|461595|sp|P31853|ATPX_SPIOL ATP synthase B' chain, chloroplast precursor (Subunit II) (evalue: 9e-47, score=189)">
      <seq>atcccaagttctaagaagccatggccaacatgattatgagctcctccaaagccttaatcacttcttcatcctccaccatcccttcatctccaagattcaaactttccctcacccaaatcccttttccaaaactacccctccccagatcacccaaatcccttgaaaccctctcaatcccatcaactctcaagtccatttcagtcattcttgcaagctcattggctattgcaccaccttcactagcagaagaaattgaaaaagcttccctttttgacttcaacttgacacttcccaccatgatggctgaattcctgtttctcatgtttgctttagacaagatttacttcagcccattagggaaattcatggatgaaagagattctgctattaaggagaaacttagcagtgtaaaggacacatctactgaagtgaagcaactggaagaccaagctgctgcaattatgaaggctgcaagggctgagatatcagcagcattgaacaagatgaagaaagagactcagcaagaagtggaacagaagattgcagaaggaaggaagaaagttgaggctgaattgctagaagctttggctagtttagagaatcaaaaagaggagacaatgaagagtcttgattctcagattgctgctcttagtgatgagattgtcaagaaagttcttcctgccagtaattaattctgaaaaatttgtctagtaaagatatataaatgtgaaaatatttggtctttttatatcatgaatctcatgtgtacatcttggtttttggtaatatgaggattctaagtgatttttaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0135H21-7s2vm/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06SLm0135H21.1" temp_strand="+" temp_description="C06SLm0135H21.1  AC216666.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0135H21 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="9267" stop="10678"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="9567" g_stop="10386" g_length="820"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="819" r_length="819" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0135H21.1" gen_strand="+" ref_id="SGN-U313788" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>820</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0135H21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U313788" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="9567" e_stop="10386"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCCCAAGTTCTAAGAAGCCATGGCCAACATGATTATGAGCTCCTCCAAAGCCTTAATCACTTCTTCATCCTCCACCATCCCTTCATCTCCAAGATTCAAACTTTCCCTCACCCAAATCCCTTTTCCAAAACTACCCCTCCCCAGATCACCCAAATCCCTTGAAACCCTCTCAATCCCATCAACTCTCAAGTCCATTTCAGTCATTCTTGCAAGCTCATTGGCTATTGCACCACCTTCACTAGCAGAAGAAATTGAAAAAGCTTCCCTTTTTGACTTCAACTTGACACTTCCCACCATGATGGCTGAATTCCTGTTTCTCATGTTTGCTTTAGACAAGATTTACTTCAGCCCATTAGGGAAATTCATGGATGAAAGAGATTCTGCTATTAAGGAGAAACTTAGCAGTGTAAAGGACACATCTACTGAAGTGAAGCAACTGGAAGACCAAGCTGCTGCAATTATGAAGGCTGCAAGGGCTGAGATATCAGCAGCATTGAACAAGATGAAGAAAGAGACTCAGCAAGAAGTGGAACAGAAGATTGCAGAAGGAAGGAAGAAAGTTGAGGCTGAATTGCTAGAAGCTTTGGCTAGTTTAGAGAATCAAAAAGAGGAGACAATGAAGAGTCTTGATTCTCAGATTGCTGCTCTTAGTGATGAGATTGTCAAGAAAGTTCTTCCTGCCAGTAATTAATTCTGAAAAATTTGTCTAGTAAAGATATATAAATGTGAAAATATTTGGTCTTTTTATATCATGAATCTCATGTGTACATCTTGGTTTTTGGTAATAATGAGGATTCTAAGTGATTTTTCAGGATCTTG</genome_strand>
        <mrna_strand>ATCCCAAGTTCTAAGAAGCCATGGCCAACATGATTATGAGCTCCTCCAAAGCCTTAATCACTTCTTCATCCTCCACCATCCCTTCATCTCCAAGATTCAAACTTTCCCTCACCCAAATCCCTTTTCCAAAACTACCCCTCCCCAGATCACCCAAATCCCTTGAAACCCTCTCAATCCCATCAACTCTCAAGTCCATTTCAGTCATTCTTGCAAGCTCATTGGCTATTGCACCACCTTCACTAGCAGAAGAAATTGAAAAAGCTTCCCTTTTTGACTTCAACTTGACACTTCCCACCATGATGGCTGAATTCCTGTTTCTCATGTTTGCTTTAGACAAGATTTACTTCAGCCCATTAGGGAAATTCATGGATGAAAGAGATTCTGCTATTAAGGAGAAACTTAGCAGTGTAAAGGACACATCTACTGAAGTGAAGCAACTGGAAGACCAAGCTGCTGCAATTATGAAGGCTGCAAGGGCTGAGATATCAGCAGCATTGAACAAGATGAAGAAAGAGACTCAGCAAGAAGTGGAACAGAAGATTGCAGAAGGAAGGAAGAAAGTTGAGGCTGAATTGCTAGAAGCTTTGGCTAGTTTAGAGAATCAAAAAGAGGAGACAATGAAGAGTCTTGATTCTCAGATTGCTGCTCTTAGTGATGAGATTGTCAAGAAAGTTCTTCCTGCCAGTAATTAATTCTGAAAAATTTGTCTAGTAAAGATATATAAATGTGAAAATATTTGGTCTTTTTATATCATGAATCTCATGTGTACATCTTGGTTTTTGGTAAT-ATGAGGATTCTAAGTGATTTTTAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0135H21-7s2vm/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U315563" ref_strand="+" ref_description="SGN-U315563        Tomato 200607 #1 [28 ESTs aligned] arabidopsis/peptide: | Symbol: None | expressed protein | chr2:14433282-14434462 FORWARD | Aliases: T14G11.28, T14G11_28(evalue: 1e-42, score=170) genbank/nr: gi|51090885|dbj|BAD35458.1| unknown protein [Oryza sativa (japonica cultivar-group)] (evalue: 4e-41, score=171)">
      <seq>ggcgattggcggccaatcggccgaattcccatggggatccgacgatctgttactgttttagtataattttccccaaattatacggatcctctcttcaaaagggaaaggaggctgcgaaattagggtttacctgaagtaatcagcaaatcgatggaaggaatcacagacggagtgaacaagatgagtgtctcagagacacagaagaagaacagaatccaagtttctaacactaagaaatcactcttcttttatgttaatctctcaaagaggtacatgcaacagtacaatgaagtggaactctctgctcttgggatggctatttcgacagtggttactattgccgaaattctcaagaacaatggatttgctgttgagaagaagatcaggacactcaccgtggacatgagggatgaaccaggagcccgaccgataccaaaagcaaagattgaaatagtgctgggcaagactgagaagtttgatgagttaatggctgcagaagccgagcaaaacggggacaatgaggagcagcagaactgattatttccaaatctgttctcttcctgactattgaagttattccaatctatactgcattcagctgttgggttctctatggcctttaatttgatcttttggaaagtttttttttaaaaaaaaagcagcatggtttactttaaaattcatcatttgttggatgtgtatgccttttttttttttttaaccttgcttatctaaggtggtgttgaatgtaaacatcttgctgctatcttcactgtaagtgatgtggtaatagtttatgcctggtagttaaaaaattgaacaattggatatgtgggttgacatttctgtcattacctaattaagcatcattagtactgtctcaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0135H21-7s2vm/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06SLm0135H21.1" temp_strand="-" temp_description="C06SLm0135H21.1  AC216666.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0135H21 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="14456" stop="10527"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="14156" g_stop="13934" g_length="223"/>
          <reference_exon_boundary r_type="cDNA" r_start="45" r_stop="267" r_length="223" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="13933" i_stop="12852" i_length="1082">
            <donor d_prob="0.254" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="12851" g_stop="12803" g_length="49"/>
          <reference_exon_boundary r_type="cDNA" r_start="268" r_stop="316" r_length="49" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="12802" i_stop="12199" i_length="604">
            <donor d_prob="0.408" d_score="1.00"/>
            <acceptor a_prob="0.932" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="12198" g_stop="12136" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="317" r_stop="379" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="12135" i_stop="12058" i_length="78">
            <donor d_prob="0.952" d_score="1.00"/>
            <acceptor a_prob="0.979" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="12057" g_stop="11993" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="380" r_stop="444" r_length="65" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="11992" i_stop="11269" i_length="724">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="11268" g_stop="10828" g_length="441"/>
          <reference_exon_boundary r_type="cDNA" r_start="445" r_stop="885" r_length="441" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="886" polyA_stop="902"/>
      <MATCH_line gen_id="C06SLm0135H21.1" gen_strand="-" ref_id="SGN-U315563" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>841</cumulative_length_of_scored_exons>
        <coverage percentage="0.932" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0135H21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U315563" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="14156" e_stop="13934"/>
          <exon e_start="12851" e_stop="12803"/>
          <exon e_start="12198" e_stop="12136"/>
          <exon e_start="12057" e_stop="11993"/>
          <exon e_start="11268" e_stop="10828"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCTGTTACTGTTTTAGTATAATTTTCCCCAAATTATACGGATCCTCTCTTCAAAAGGGAAAGGAGGCTGCGAAATTAGGGTTTACCTGAAGTAATCAGCAAATCGATGGAAGGAATCACAGACGGAGTGAACAAGATGAGTGTCTCAGAGACACAGAAGAAGAACAGAATCCAAGTTTCTAACACTAAGAAATCACTCTTCTTTTATGTTAATCTCTCAAAGGTCCTTTTTTAATGCATTTGAATTTATATATACATTGAAATCATAAGGAGTTTTTTAAGCAATTAGCTATTTAAATTTGTTTACTTGTTTTTCAATGTTATAAAGCCATGCATTGTAGTCTGTGTATCCATTGGCGAAGTTTTGGGAATTTTGTTTTGGGTAATTGGACGGAGTTTTAAAGTGATTATACTTGTTTGTCTGTAAATTGGTTATGGAGCATTCTTTATGAAGACGGCTAGATTTGCAATAATTTGGCTTCTTTAGTAATTGTTTCTGTTTAATGGTTATGAGGGTCTATGGTTGTTGAACAATGGTAGATTCTTTTATGGTTGTTGAGTTGTTTGCTGATAAGTTATGTGAGAGAAGGTAAAAAGAAGGACTTGGATCTTGCATACTGTTTTAATTACATTTTTAAAAATGACATTGCTCATAGCGGGAGACCTGCAAAATGCTATCAGTTAATTAACAATAACCAGGGTTTTTGTTAATTCAATGTTTTTGATTGCTTATGTTAACTGAGGTCTAGTTTCCTGGGATTTTTTAGTTTTTGATGGAAGAAAATTTGCTAATCTGTATTACAATAATTAATTGATGAGTTGGGTGATTGAAGAAAAAATTCTATATGTAATGCGGGGAGTTAAAGAGAAAAAATATTTTTGTTTGAGAAACATAAAATTAGTACATGGTTCAAGTTCTAATTGTCTGCTGTAGCAGTTCAGACAGGACTTCACAAAGTCTAGAGTAATTGCAATGAAAGTGATGTGAGTCTATGTAGGATCTGAGTTAATAATTTGGATGTGCAATTTAGGCACTTCATAGGTATTATTTATCAAAAGATACTTTATGTATTTTTGAAGAATTTCCCCGCATACAGTGACAATTATAGGGTTGGCGCAGGACTTATAACATATTGTTTGAAGCTTTTTCTGGATGCAAGTGGGACTGTGACATGCATTAGAAAGTCTTGAAAAGTGCTAGCCATATTACCATCTCTATTTTATTTTTCCTGGTCTTACACCAGATCTATAATTGTTGCTAGTGATCTGAGTTAGTATCCTGAGATATTTGTATGTTTCTTGCAGAGGTACATGCAACAGTACAATGAAGTGGAACTCTCTGCTCTTGGGATGGGTAAATCTTCTGGACCCTCAATCTGGAGAACTAGTTTGTGGTTTCCCCTTGCTTATAATGTCATATGGGTCTTCTTCTACATTAATTGTGTTTATGCTAATCAACGTTCTCTTGATTATTTGTGAATTCCAAACTTTGCAATGTGTGATGTTTTCTGCCATCTCAAGAATGTGTTGGTTACTATTGCAACCGCTTGTGTATAAGAAGAGCATAATACACAGTGTTGCTCACTTTACCAGCGATATCCGAGTGAAACAAATTTGAACCAACTTCTGGCATAAAAATGACCATGATTTTTAAATATAGTTAGTAGTTGGGCGTATCTGGGATGAATTCATCACAACATTATTCCTGCGGCTTCCCAGGGATCTTTTACTTATAAAGTTAGAACGTGCTTGAGAAAATGGCTGAAGTGGTTCCTTGTGCTTGCCGGTAAACCTTATTGAGTAAAAAGAAATACATAGTGGTGGTACAGTTCAGTTTGAAGTTCTTTTCATTTTTTTTTGTGGGCTCATCCTTTTGTGTTATGTTGCAAACACATTAATAATTCAATTGGCTTGCCATATACTCTAAAGGATTAACAATCTTTTCCGCATGTATACAGCTATTTCGACAGTGGTTACTATTGCCGAAATTCTCAAGAACAATGGATTTGCTGTTGAGAAGAGTGAGGCTTTTCCTACTCCACTCCCTTCCCTTTTATTATCTTTCTTGACTTCTAACTTTGAGGGTACACTTCTTGCAGAGATCAGGACACTCACCGTGGACATGAGGGATGAACCAGGAGCCCGACCGATACCAAAAGCAAAGGTAAATTCCAAAAGCATTATGAGTCGGTCAATTGATGTATTAGTCTGCTTCTGTTTTGGTGGTTTGGTAGTAATGGAACTCATTCTGTTGTGGTTCTCTGGTAAGTGTTAGCTTGGGACTTAAAATTCTTTCCGAAGAATAGTAGATCAAGTTAAGTGTTCAAGAGGTAGTTGATGTGTGTGTGCACACACTTATTTAGCTCTGTTTAAGTTCAGATGTGTGCAGAATTTTAGAAAAGCTGTTGAATTGATGGTAGGGTCAGTGATGGTTTACATCCTTACCACATTGTCTAGTCTCATTTGGTTATCTTCGACTTGATTGGAAGTTAGTTTCACACCCCCATGCCTGTTGAAAGTACATTCCCTTTTAACGCATTATCTTATGGTTTTGCCCATTGTTGTTTTCCTGTTTTCAAAAGCCACTGAACAGAGTAAAATCATATTCTTTTGGCAACAACAGAGATGGAAAAATGAATCTAGTCAGTATTACACTATGTCCATATAGATGCTGCTTTTACAGCTTTCATGTTCTTCTTCCCCCATATACTCTTTAAAACAATGTTGAATTCATGTGAGCTAGTGGGTGTTGAATGTGGTTCGTAATCCATCTTTTTTTTTAAAAAAAATCCTTCTCCGAACAATGACCCTCACCTAATCTGTGGTAGTGTCTTTTTTATAATCGAACCAAGGGTTTTTGTCTTATGTATCATCTTTGCTTGGTGCAGATTGAAATAGTGCTGGGCAAGACTGAGAAGTTTGATGAGTTAATGGCTGCAGAAGCCGAGCAAAACGGGGACAATGAGGAGCAGCAGAACTGATTATTTCCAAATCTGTTCTCTTCCTGACTATTGAAGTTATTCCAATCTATACTGCATTCAGCTGTTGGGTTCTCTATGGCCTTTAATTTGATCTTTTGGAAAGTTTTTTTTTAAAAAAAAAGCAGCATGGTTTACTTTAAAATTCATCATTTGTTGGATGTGTATGCCTTTTTTTTTTTTTTAACCTTGCTTATCTAAGGTGGTGTTGAATGTAAACATCTTGCTGCTATCTTCACTGTAAGTGATGTGGTAATAGTTTATGCCTGGTAGTTAAAAAATTGAACAATTGGATATGTGGGTTGACATTTCTGTCATTACCTAATTAAGCATCATTAGTACTGTCTCACA</genome_strand>
        <mrna_strand>ATCTGTTACTGTTTTAGTATAATTTTCCCCAAATTATACGGATCCTCTCTTCAAAAGGGAAAGGAGGCTGCGAAATTAGGGTTTACCTGAAGTAATCAGCAAATCGATGGAAGGAATCACAGACGGAGTGAACAAGATGAGTGTCTCAGAGACACAGAAGAAGAACAGAATCCAAGTTTCTAACACTAAGAAATCACTCTTCTTTTATGTTAATCTCTCAAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGTACATGCAACAGTACAATGAAGTGGAACTCTCTGCTCTTGGGATGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATTTCGACAGTGGTTACTATTGCCGAAATTCTCAAGAACAATGGATTTGCTGTTGAGAAGA..............................................................................AGATCAGGACACTCACCGTGGACATGAGGGATGAACCAGGAGCCCGACCGATACCAAAAGCAAAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGAAATAGTGCTGGGCAAGACTGAGAAGTTTGATGAGTTAATGGCTGCAGAAGCCGAGCAAAACGGGGACAATGAGGAGCAGCAGAACTGATTATTTCCAAATCTGTTCTCTTCCTGACTATTGAAGTTATTCCAATCTATACTGCATTCAGCTGTTGGGTTCTCTATGGCCTTTAATTTGATCTTTTGGAAAGTTTTTTTTTAAAAAAAAAGCAGCATGGTTTACTTTAAAATTCATCATTTGTTGGATGTGTATGCCTTTTTTTTTTTTTTAACCTTGCTTATCTAAGGTGGTGTTGAATGTAAACATCTTGCTGCTATCTTCACTGTAAGTGATGTGGTAATAGTTTATGCCTGGTAGTTAAAAAATTGAACAATTGGATATGTGGGTTGACATTTCTGTCATTACCTAATTAAGCATCATTAGTACTGTCTCAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0135H21-7s2vm/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U313184" ref_strand="+" ref_description="SGN-U313184        Tomato 200607 #1 [34 ESTs aligned] arabidopsis/peptide: | Symbol: None | protease inhibitor/seed storage/lipid transfer protein (LTP) family protein, similar to 14 kDa polypeptide (Catharanthus roseus) GI:407410; contains Pfam protease inhibitor/seed storage/LTP family domain PF00234 | chr2:18633413-18633951 FORWARD | Aliases: F4L23.31(evalue: 2e-28, score=122) genbank/nr: gi|8745402|gb|AAF78903.1| proline-rich protein [Glycine max](evalue: 7e-29, score=130)">
      <seq>agaaaccaagctacaccaccacttaaagttctctagaataaatcatggctgccctctcctccaccattttcatattttcccttctaattttggccacattcactagtggttgtggtccatgtgagccaaagcctcacccaacaccaaaggcacccccagtgaacccttattgtccaagggacacattgaagcttggtgtttgtgctgacctacttggccttgtaaatgttgcaattggtagccaagtgacaaccccttgttgctcattgcttgaaggtttggctgatttggaagttgcagcttgtctttgcactgccattaaggctaatgtacttgggattgtcaaattagatattcctgttgctcttagtgctttggttagtgcttgtgctaagaaagttcccacaggtttcaagtgtggttaattagagtattaattagccaagggtggggtgggggagtaaagcatatcaaatttcaagatttggtagctagttaattaagtttattgttttaattaatcattgagttgtaaaatgatgtttgtgttgttatttgatcttgatttgtgtatgtttgatttgttatctagctaggttcctttttttgttttggttggttgtaaaataaatttgtcatttgtgctcaataaagtgtgaaacattcttcaccttgtgaaaacttgcatctatatgaaaagtttcaagttcaatgtattgatttttcaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0135H21-7s2vm/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06SLm0135H21.1" temp_strand="-" temp_description="C06SLm0135H21.1  AC216666.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0135H21 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="17089" stop="15754"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16789" g_stop="16054" g_length="736"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="736" r_length="736" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="737" polyA_stop="750"/>
      <MATCH_line gen_id="C06SLm0135H21.1" gen_strand="-" ref_id="SGN-U313184" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>736</cumulative_length_of_scored_exons>
        <coverage percentage="0.981" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0135H21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U313184" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16789" e_stop="16054"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAACCAAGCTACACCACCACTTAAAGTTCTCTAGAATAAATCATGGCTGCCCTCTCCTCCACCATTTTCATATTTTCCCTTCTAATTTTGGCCACATTCACTAGTGGTTGTGGTCCATGTGAGCCAAAGCCTCACCCAACACCAAAGGCACCCCCAGTGAACCCTTATTGTCCAAGGGACACATTGAAGCTTGGTGTTTGTGCTGACCTACTTGGCCTTGTAAATGTTGCAATTGGTAGCCAAGTGACAACCCCTTGTTGCTCATTGCTTGAAGGTTTGGCTGATTTGGAAGTTGCAGCTTGTCTTTGCACTGCCATTAAGGCTAATGTACTTGGGATTGTCAAATTAGATATTCCTGTTGCTCTTAGTGCTTTGGTTAGTGCTTGTGCTAAGAAAGTTCCCACAGGTTTCAAGTGTGGTTAATTAGAGTATTAATTAGCCAAGGGTGGGGTGGGGGAGTAAAGCATATCAAATTTCAAGATTTGGTAGCTAGTTAATTAAGTTTATTGTTTTAATTAATCATTGAGTTGTAAAATGATGTTTGTGTTGTTATTTGATCTTGATTTGTGTATGTTTGATTTGTTATCTAGCTAGGTTCCTTTTTTTGTTTTGGTTGGTTGTAAAATAAATTTGTCATTTGTGCTCAATAAAGTGTGAAACATTCTTCACCTTGTGAAAACTTGCATCTATATGAAAAGTTTCAAGTTCAATGTATTGATTTTTCAAATAAGAAA</genome_strand>
        <mrna_strand>AGAAACCAAGCTACACCACCACTTAAAGTTCTCTAGAATAAATCATGGCTGCCCTCTCCTCCACCATTTTCATATTTTCCCTTCTAATTTTGGCCACATTCACTAGTGGTTGTGGTCCATGTGAGCCAAAGCCTCACCCAACACCAAAGGCACCCCCAGTGAACCCTTATTGTCCAAGGGACACATTGAAGCTTGGTGTTTGTGCTGACCTACTTGGCCTTGTAAATGTTGCAATTGGTAGCCAAGTGACAACCCCTTGTTGCTCATTGCTTGAAGGTTTGGCTGATTTGGAAGTTGCAGCTTGTCTTTGCACTGCCATTAAGGCTAATGTACTTGGGATTGTCAAATTAGATATTCCTGTTGCTCTTAGTGCTTTGGTTAGTGCTTGTGCTAAGAAAGTTCCCACAGGTTTCAAGTGTGGTTAATTAGAGTATTAATTAGCCAAGGGTGGGGTGGGGGAGTAAAGCATATCAAATTTCAAGATTTGGTAGCTAGTTAATTAAGTTTATTGTTTTAATTAATCATTGAGTTGTAAAATGATGTTTGTGTTGTTATTTGATCTTGATTTGTGTATGTTTGATTTGTTATCTAGCTAGGTTCCTTTTTTTGTTTTGGTTGGTTGTAAAATAAATTTGTCATTTGTGCTCAATAAAGTGTGAAACATTCTTCACCTTGTGAAAACTTGCATCTATATGAAAAGTTTCAAGTTCAATGTATTGATTTTTCAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0135H21-7s2vm/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U334200" ref_strand="-" ref_description="SGN-U334200        Tomato 200607 #1 [1 ESTs aligned]">
      <seq>ctcttagtgctttggttagtgcttgtgctaagaaagttcccgcagctataaagggtggttaattagagtccttttaaaccaagggtggggtgggggagtaaagcatatcgaatttcaagatttggtagctagttaattaagtttattgttttaattaatcattaagttgtaaaataatgtttgtgttgttatttgatcttgatttgtgtatgtttgatttgttatctagctaggttcctttttttgttttggttggttgtaaaataaatttgtcatttgtgctcaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0135H21-7s2vm/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06SLm0135H21.1" temp_strand="-" temp_description="C06SLm0135H21.1  AC216666.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0135H21 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="16726" stop="15837"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16426" g_stop="16137" g_length="290"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="290" r_length="290" r_score="0.948"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="291" polyA_stop="305"/>
      <MATCH_line gen_id="C06SLm0135H21.1" gen_strand="-" ref_id="SGN-U334200" ref_strand="-">
        <total_alignment_score>0.948</total_alignment_score>
        <cumulative_length_of_scored_exons>290</cumulative_length_of_scored_exons>
        <coverage percentage="0.951" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0135H21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U334200" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="16426" e_stop="16137"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCTTAGTGCTTTGGTTAGTGCTTGTGCTAAGAAAGTTCCCACAGGTTTCAAGTGTGGTTAATTAGAGTATTAATTAGCCAAGGGTGGGGTGGGGGAGTAAAGCATATCAAATTTCAAGATTTGGTAGCTAGTTAATTAAGTTTATTGTTTTAATTAATCATTGAGTTGTAAAATGATGTTTGTGTTGTTATTTGATCTTGATTTGTGTATGTTTGATTTGTTATCTAGCTAGGTTCCTTTTTTTGTTTTGGTTGGTTGTAAAATAAATTTGTCATTTGTGCTCAATAAA</genome_strand>
        <mrna_strand>CTCTTAGTGCTTTGGTTAGTGCTTGTGCTAAGAAAGTTCCCGCAGCTATAAAGGGTGGTTAATTAGAGTCCTTTTAAACCAAGGGTGGGGTGGGGGAGTAAAGCATATCGAATTTCAAGATTTGGTAGCTAGTTAATTAAGTTTATTGTTTTAATTAATCATTAAGTTGTAAAATAATGTTTGTGTTGTTATTTGATCTTGATTTGTGTATGTTTGATTTGTTATCTAGCTAGGTTCCTTTTTTTGTTTTGGTTGGTTGTAAAATAAATTTGTCATTTGTGCTCAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0135H21-7s2vm/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U318687" ref_strand="+" ref_description="SGN-U318687        Tomato 200607 #1 [15 ESTs aligned] arabidopsis/peptide: | Symbol: None | synaptobrevin family protein, similar to Synaptobrevin-like protein 1 (SP:P51809) (Homo sapiens) | chr4:15526119-15527885 REVERSE | Aliases: F10N7.40, F10N7_40(evalue: 2e-92, score=335) genbank/nr: Longin-like(evalue: 7e-94, score=347)">
      <seq>aatcaatctaacgcccatctcttcatcgtcttcttcctcaaaaaaagaaaagaggaagaaaggtgcagaggaagagagatgacgatattgtatgcgctggtagcgaggggatcggtggtattggcggagcagagcggaacgtcaacgaacgcgagtacgatcgcgaggcagattttggagaaaattccggggaataatgattccaatgcgtcgtactcacaggatcggtatattttccatgttaaacgcacggatggacttactgttctctgtatggcggatgatagtgctggaaggagaatccctttcgcatttcttgaagaaattcaccaaaaattcgtgagaacgtatggccgagcagttctgtctgcgcaagcttatggtatgaatgatgaattttcgagggtccttagccagcaaatggaatactactccagtgatccaaatgcagacagaataaacaggctaaagggtgaaatgagtcaggtgcgcactgtcatggttgagaatatcgataaagttctagagagaggtgatcgcttggaattgctggtcgataaaacagctaatatgcaagagaatactttccgcttcagaaagcaggctcgccggttcagaagcactgtatggtggagaaatgtcaaactcacggtggctctgatattcctcctcctagtgataatatatgttattttggctttcgcttgtcatggacttacacttccaacttgtttgaagtgaggattactggatcagcatcacatcttttgtccttaaaacattattttgcaatttttttcatctaaatcaatcttggggtaaagcttggatgtgtgttttggcatggatttcatccttgatatgtattaatcgtgtgatatccttaagcttataagcaagccaaaactcttggtttgataatgtagattgtatttatatataattttgacccatgtgaggaaaatgaagggggtcaaataactcatgattgatttcttggtttgatatctgttttgaaatatatttgactatctttttaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0135H21-7s2vm/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06SLm0135H21.1" temp_strand="+" temp_description="C06SLm0135H21.1  AC216666.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0135H21 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="24071" stop="27824"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="24371" g_stop="24422" g_length="52"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="52" r_length="52" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="24423" i_stop="24622" i_length="200">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="24623" g_stop="24865" g_length="243"/>
          <reference_exon_boundary r_type="cDNA" r_start="53" r_stop="295" r_length="243" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="24866" i_stop="25781" i_length="916">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="25782" g_stop="25972" g_length="191"/>
          <reference_exon_boundary r_type="cDNA" r_start="296" r_stop="486" r_length="191" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="25973" i_stop="26356" i_length="384">
            <donor d_prob="0.953" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="26357" g_stop="26520" g_length="164"/>
          <reference_exon_boundary r_type="cDNA" r_start="487" r_stop="650" r_length="164" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="26521" i_stop="27134" i_length="614">
            <donor d_prob="0.981" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="27135" g_stop="27523" g_length="389"/>
          <reference_exon_boundary r_type="cDNA" r_start="651" r_stop="1038" r_length="388" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="1039" polyA_stop="1051"/>
      <MATCH_line gen_id="C06SLm0135H21.1" gen_strand="+" ref_id="SGN-U318687" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>1039</cumulative_length_of_scored_exons>
        <coverage percentage="0.989" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0135H21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U318687" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="24371" e_stop="24422"/>
          <exon e_start="24623" e_stop="24865"/>
          <exon e_start="25782" e_stop="25972"/>
          <exon e_start="26357" e_stop="26520"/>
          <exon e_start="27135" e_stop="27523"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATCAATCTAACGCCCATCTCTTCATCGTCTTCTTCCTCAAAAAAAGAAAAGGTAAACGCTCTACTGTAACGATCCGATTTTCTTCAAACTTAGCTCTAAATTTATATTATTGAGGCGGATCTAGAATTTGAAATTAGAAGGTATATATACATATTTTTTTTTTTATAAATTTTGATACAAAAATGTTTATACGAATGTAGAGGCGGATCTTGCATAATCATACATATTTTTAATTTTATATGTATATGCAGAGGAAGAAAGGTGCAGAGGAAGAGAGATGACGATATTGTATGCGCTGGTAGCGAGGGGATCGGTGGTATTGGCGGAGCAGAGCGGAACGTCAACGAACGCGAGTACGATCGCGAGGCAGATTTTGGAGAAAATTCCGGGGAATAATGATTCCAATGCGTCGTACTCACAGGATCGGTATATTTTCCATGTTAAACGCACGGATGGACTTACTGTTCTCTGTATGGCGGATGATAGTGCTGGAAGTAAGCAATTTTTTACCCTTTTGTATAATGCTGTTATGTTGTTAGAATGTGTTTACATTCATGTTTATGTCGATTCAGCTTTCTTGTTATGTGTATTTAATCTAGATATATTGAAACAACATCAACAACATAGCCGGTGTAATCTGACAAATGGGGCTGGGAGGGTGGTGACTGGTGTGTATGCAACCTTATTAAGGTAGAAAGATTGTTTTCGATAGTGTCGACTCAAATATAGATATATCTAAACAACAGCAACAACATGGGTCCGGGGAGAATGGTGTGTATGCAACCTTATCCTGATGGTAGAGAGACTGTTTCTGATTGATACTCGGCTTGAATCTAGTTATATCTAAACAAAACAACATAACCAGGGTAATCTCACGAGTGGGGTTAGGGTAGGTTATTGTGAAGATGACTATACTTCAGTGAGTTGGTGAATGGATATATTAAACCCACAAGGACCCCTCTCAGTGATTAATCCATGGGCTATAAGTCATTTTATAAATCAGAGGAACAGAATATTGTGAAGTGTTGTCTTTTAAGCAGACTTATGGTCTTTAGTTACAGGTTCATTTCACAATATCACTGAATAATATCCTGCAGCATTGTTTATTCTGCTCTTCTTGATTTATATTTATATTTTTATTCTGTCTTAGGGACATCTATTCTCTATCCTTCTTTAATATGTTTTACCTTGGCATCTTTTCCTTGATTTTGTATATACTTTGGTTAGTTGTTCCCCAAAAATGAAGAAAATGTGTAGTTGTATGTGGACTTCTCCTTTTAATTTAGTTCGAATTTAGATAGTGGTTTAACTCTTTAGTAACACCAACAGATTTCATTTTCATTTTTGATGTGTTGCCTTGGAAGATTGACATATATTGTGGATATTTTACTATACTGAATTCCTTTGCAGGGAGAATCCCTTTCGCATTTCTTGAAGAAATTCACCAAAAATTCGTGAGAACGTATGGCCGAGCAGTTCTGTCTGCGCAAGCTTATGGTATGAATGATGAATTTTCGAGGGTCCTTAGCCAGCAAATGGAATACTACTCCAGTGATCCAAATGCAGACAGAATAAACAGGCTAAAGGGTGAAATGAGTCAGGTCAGTCACCAATGTTGTTTATGCCTTAGGGAGCTTATGTTCTAGATGTTGGCTCATGCAAATTCCACATTTTCTCAATCTGATGAGGCTTGCACATTTCAATGCGTCATGATTATCTTATCAACAAGCATATTGTATTGAGTGATTAGGCTTAATAATTCGTGGTGTTTGATGCAACATGATTCCCTAGAGAGACCATCAATAGTCATTTATATGTTCCTGTAATAAAGCTTTTATTGTATTGATGAGTAGCGGTGATAAAAACAATATTAACAGTTTCAGTTGTCAAATCTTATAAACTAGAAATTGCAGCAAATCATATTTACCAGCCATTATATTTTGACATTAGCTAAGGAACTTTTGGATATATGTGCCATGTAACAGGTGCGCACTGTCATGGTTGAGAATATCGATAAAGTTCTAGAGAGAGGTGATCGCTTGGAATTGCTGGTCGATAAAACAGCTAATATGCAAGAGAATACTTTCCGCTTCAGAAAGCAGGCTCGCCGGTTCAGAAGCACTGTATGGTGGAGAAATGTCAAACTCACGTATGTTGCTTCCATTACTTGGACAAAAGCTATTTCTTTGTTTCATTTTTCCTTGGTGGGGAAGGGGGTTGTTCTTTCAATAGTTGGATGAATTATAATTATTAGATTTCTTTTATTGGGTAAGATTAAATTCTGATTCTAACAGTTAGACTGTTACATGTGAAGATTCCTTTTATATGGCATTACTGAAACTAGCTGGGCTCTATCCTGCCTTAAATGGTTTGATAAAACGGACAGTGTATCTTCCAGGATAAAATTTTAAAACGTGAAGAATCCAATTACATCTTTGGGAGGTCCATGAAACGATTGATCAGTATAAAGCTTCCTCATGGATTTCTTGATTTAGTTATTCCTTCTCCATATAATATGTGTTTCACGATCTTTTATCTGCCTGCTCCTAAACAGTATGAATTTTTTGAAGCAATTCTAACAACAGATCCCTACGTTTACAGAAGATTTCATAGTTTTATACTGTACTTATTCTCTCAGGATATTGTTAATTTTGTTCGTGATGGTTGTTTACATTTAAGGAGTGGCCAGCTTCAAGTTTTTACTTCCCTATTTCATTATTCAATTTTGTCATCGTTCTTTATAATGATGTTTGATTTTTGCAGGGTGGCTCTGATATTCCTCCTCCTAGTGATAATATATGTTATTTTGGCTTTCGCTTGTCATGGACTTACACTTCCAACTTGTTTGAAGTGAGGATTACTGGATCAGCATCACATCTTTTGTCCTTAAAACATTATTTTGCAATTTTTTTCATCTAAATCAATCTTGGGGTAAAGCTTGGATGTGTGTTTTGGCATGGATTTCATCCTTGATATGTATTAATCGTGTGATATCCTTAAGCTTATAAGCAAGCCAAAACTCTTGGTTTGATAATGTAGATTGTATTTATATATAATTTTGACCCATGTGAGGAAAATGAAGGGGGTCAAATAACTCATGATTGATTTCTTGGTTTGATATCTGTTTTGAAATATATTTTGACTATCTTTTT</genome_strand>
        <mrna_strand>AATCAATCTAACGCCCATCTCTTCATCGTCTTCTTCCTCAAAAAAAGAAAAG........................................................................................................................................................................................................AGGAAGAAAGGTGCAGAGGAAGAGAGATGACGATATTGTATGCGCTGGTAGCGAGGGGATCGGTGGTATTGGCGGAGCAGAGCGGAACGTCAACGAACGCGAGTACGATCGCGAGGCAGATTTTGGAGAAAATTCCGGGGAATAATGATTCCAATGCGTCGTACTCACAGGATCGGTATATTTTCCATGTTAAACGCACGGATGGACTTACTGTTCTCTGTATGGCGGATGATAGTGCTGGAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGAATCCCTTTCGCATTTCTTGAAGAAATTCACCAAAAATTCGTGAGAACGTATGGCCGAGCAGTTCTGTCTGCGCAAGCTTATGGTATGAATGATGAATTTTCGAGGGTCCTTAGCCAGCAAATGGAATACTACTCCAGTGATCCAAATGCAGACAGAATAAACAGGCTAAAGGGTGAAATGAGTCAG................................................................................................................................................................................................................................................................................................................................................................................................GTGCGCACTGTCATGGTTGAGAATATCGATAAAGTTCTAGAGAGAGGTGATCGCTTGGAATTGCTGGTCGATAAAACAGCTAATATGCAAGAGAATACTTTCCGCTTCAGAAAGCAGGCTCGCCGGTTCAGAAGCACTGTATGGTGGAGAAATGTCAAACTCAC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGCTCTGATATTCCTCCTCCTAGTGATAATATATGTTATTTTGGCTTTCGCTTGTCATGGACTTACACTTCCAACTTGTTTGAAGTGAGGATTACTGGATCAGCATCACATCTTTTGTCCTTAAAACATTATTTTGCAATTTTTTTCATCTAAATCAATCTTGGGGTAAAGCTTGGATGTGTGTTTTGGCATGGATTTCATCCTTGATATGTATTAATCGTGTGATATCCTTAAGCTTATAAGCAAGCCAAAACTCTTGGTTTGATAATGTAGATTGTATTTATATATAATTTTGACCCATGTGAGGAAAATGAAGGGGGTCAAATAACTCATGATTGATTTCTTGGTTTGATATCTGTTTTGAAATATA-TTTGACTATCTTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0135H21-7s2vm/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U336601" ref_strand="+" ref_description="SGN-U336601        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: | Symbol: None | synaptobrevin family protein, similar to Synaptobrevin-like protein 1 (SP:P51809) (Homo sapiens) | chr4:15526119-15527885 REVERSE | Aliases: F10N7.40, F10N7_40(evalue: 5e-44, score=174) genbank/nr: Longin-like(evalue: 1e-43, score=179)">
      <seq>ttcctcaaaaaaagaaaaggtaaacgctctactgtaacgatccgattttcttcaaacttagctctaaatttatattattgaggcggatctagaatttgaaattagaagaggaagaaaggtgcagaggaagagagatgaccatattgtatgcgctggtagcgaggggatcggtggtattggcggagcagagcggaacgtcaacgaacgcgagtacgagcgcgaggcaaattttggagaaaattccggggaataatgattccaatgcgtcgtgctcacaggatcggtatatttttcatgttgaacgcacggatggacttactgttctctgtttggcggat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0135H21-7s2vm/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06SLm0135H21.1" temp_strand="+" temp_description="C06SLm0135H21.1  AC216666.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0135H21 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="24104" stop="25152"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="24404" g_stop="24511" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="108" r_length="108" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="24512" i_stop="24622" i_length="111">
            <donor d_prob="0.925" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="24623" g_stop="24852" g_length="230"/>
          <reference_exon_boundary r_type="cDNA" r_start="109" r_stop="338" r_length="230" r_score="0.970"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0135H21.1" gen_strand="+" ref_id="SGN-U336601" ref_strand="+">
        <total_alignment_score>0.979</total_alignment_score>
        <cumulative_length_of_scored_exons>338</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0135H21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U336601" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="24404" e_stop="24511"/>
          <exon e_start="24623" e_stop="24852"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCCTCAAAAAAAGAAAAGGTAAACGCTCTACTGTAACGATCCGATTTTCTTCAAACTTAGCTCTAAATTTATATTATTGAGGCGGATCTAGAATTTGAAATTAGAAGGTATATATACATATTTTTTTTTTTATAAATTTTGATACAAAAATGTTTATACGAATGTAGAGGCGGATCTTGCATAATCATACATATTTTTAATTTTATATGTATATGCAGAGGAAGAAAGGTGCAGAGGAAGAGAGATGACGATATTGTATGCGCTGGTAGCGAGGGGATCGGTGGTATTGGCGGAGCAGAGCGGAACGTCAACGAACGCGAGTACGATCGCGAGGCAGATTTTGGAGAAAATTCCGGGGAATAATGATTCCAATGCGTCGTACTCACAGGATCGGTATATTTTCCATGTTAAACGCACGGATGGACTTACTGTTCTCTGTATGGCGGAT</genome_strand>
        <mrna_strand>TTCCTCAAAAAAAGAAAAGGTAAACGCTCTACTGTAACGATCCGATTTTCTTCAAACTTAGCTCTAAATTTATATTATTGAGGCGGATCTAGAATTTGAAATTAGAAG...............................................................................................................AGGAAGAAAGGTGCAGAGGAAGAGAGATGACCATATTGTATGCGCTGGTAGCGAGGGGATCGGTGGTATTGGCGGAGCAGAGCGGAACGTCAACGAACGCGAGTACGAGCGCGAGGCAAATTTTGGAGAAAATTCCGGGGAATAATGATTCCAATGCGTCGTGCTCACAGGATCGGTATATTTTTCATGTTGAACGCACGGATGGACTTACTGTTCTCTGTTTGGCGGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0135H21-7s2vm/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U345617" ref_strand="+" ref_description="SGN-U345617        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: AT3G17090.1 | Symbol: None | protein phosphatase 2C family protein / PP2C family protein, similar to Ser/Thr protein phosphatase 2C (PP2C6) (GI:15020818) (Arabidopsis thaliana); similar to protein phosphatase 2C (GI:3608412) (Mesembryanthemum crystallinum); contains Pfam PF00481 : Protein phosphatase 2C domain; | chr3:5826809-5829639 FORWARD | Aliases: K14A17.4 (evalue: 8e-42, score=167) genbank/nr: catalytic/(evalue: 6e-40, score=167)">
      <seq>tgttaatagcagccgacaaaattaagaatgaggcacattctatttcgtgttcctcctccaaccaacacctcccacttccctctgccccccttacccccaaactacaatcctctacatatacatatctgtatctaactcttagtattgcttcaagaaagtttgattcaacttgtaaattttcaattttgaaagttgggtacttgtttttttttgaattggggttagctccatgtgggattcttgaattttgatttgatgaatttccttccaagatgtttgagttacagtgaatgtagtggtggagctggaagaagtgaaattaggggtggtgaaagttccaatggtggatttgggaaagatgggttgttgtggtttcatgatattgggaattgtgggagtggggaatattccatggctattgtgcaagctaatcaggtcttagaggatcagagccagattgagtctggtccatttggaacttttgttggagtctatgatggtcatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0135H21-7s2vm/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06SLm0135H21.1" temp_strand="+" temp_description="C06SLm0135H21.1  AC216666.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0135H21 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="43373" stop="44477"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="43673" g_stop="44177" g_length="505"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="505" r_length="505" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0135H21.1" gen_strand="+" ref_id="SGN-U345617" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>505</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0135H21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U345617" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="43673" e_stop="44177"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTTAATAGCAGCCGACAAAATTAAGAATGAGGCACATTCTATTTCGTGTTCCTCCTCCAACCAACACCTCCCACTTCCCTCTGCCCCCCTTACCCCCAAACTACAATCCTCTACATATACATATCTGTATCTAACTCTTAGTATTGCTTCAAGAAAGTTTGATTCAACTTGTAAATTTTCAATTTTGAAAGTTGGGTACTTGTTTTTTTTTGAATTGGGGTTAGCTCCATGTGGGATTCTTGAATTTTGATTTGATGAATTTCCTTCCAAGATGTTTGAGTTACAGTGAATGTAGTGGTGGAGCTGGAAGAAGTGAAATTAGGGGTGGTGAAAGTTCCAATGGTGGATTTGGGAAAGATGGGTTGTTGTGGTTTCATGATATTGGGAATTGTGGGAGTGGGGAATATTCCATGGCTATTGTGCAAGCTAATCAGGTCTTAGAGGATCAGAGCCAGATTGAGTCTGGTCCATTTGGAACTTTTGTTGGAGTCTATGATGGTCATG</genome_strand>
        <mrna_strand>TGTTAATAGCAGCCGACAAAATTAAGAATGAGGCACATTCTATTTCGTGTTCCTCCTCCAACCAACACCTCCCACTTCCCTCTGCCCCCCTTACCCCCAAACTACAATCCTCTACATATACATATCTGTATCTAACTCTTAGTATTGCTTCAAGAAAGTTTGATTCAACTTGTAAATTTTCAATTTTGAAAGTTGGGTACTTGTTTTTTTTTGAATTGGGGTTAGCTCCATGTGGGATTCTTGAATTTTGATTTGATGAATTTCCTTCCAAGATGTTTGAGTTACAGTGAATGTAGTGGTGGAGCTGGAAGAAGTGAAATTAGGGGTGGTGAAAGTTCCAATGGTGGATTTGGGAAAGATGGGTTGTTGTGGTTTCATGATATTGGGAATTGTGGGAGTGGGGAATATTCCATGGCTATTGTGCAAGCTAATCAGGTCTTAGAGGATCAGAGCCAGATTGAGTCTGGTCCATTTGGAACTTTTGTTGGAGTCTATGATGGTCATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0135H21-7s2vm/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U331075" ref_strand="+" ref_description="SGN-U331075        Tomato 200607 #1 [2 ESTs aligned] arabidopsis/peptide: AT3G17090.1 | Symbol: None | protein phosphatase 2C family protein / PP2C family protein, similar to Ser/Thr protein phosphatase 2C (PP2C6) (GI:15020818) (Arabidopsis thaliana); similar to protein phosphatase 2C (GI:3608412) (Mesembryanthemum crystallinum); contains Pfam PF00481 : Protein phosphatase 2C domain; | chr3:5826809-5829639 FORWARD | Aliases: K14A17.4 (evalue: 5e-106, score=380) genbank/nr: gi|7670033|dbj|BAA94987.1| protein phosphatase 2C-like protein [Arabidopsis thaliana](evalue: 3e-104, score=380)">
      <seq>gtttgtgatcacttatttcgacatttccaagcaatatcagctgaaggaaatggtgtagtcacagaggagacaattcaaagggcctttcttgagacagagagagggtttacttctgttgtttcggaaaattggcattctcgaccacaactagcaacagtgggggcatgctgcctggttggagctatatatcagcagacactctttgtagcaaatcttggtgactctcgtgtagtccttggaaagaaggttggaaacactggagaaattgctgccatgcagctatcaacggagcataatgccaatattgagtctgttaggtgggagcaaaaagacttgcatccaaatgatcctcaaattgttgttcttagacatggtgtttggagggtaaaaggaataattcaggtctcaagatccattggtgatgtttatcttaaacacacaagattttgcagggaaccaacaaatggaaaattcagagttcctcaaccccttaatatgcctatcctgttggccactccaacaattttaaaacatcctctacatccaaatgactccttcctcatatttgcttctgatggtctatgggagcacttgagcaatgaaaaggccgttgaaattgtgaagagtcaccctcgtaaaggaagtgcaaagaggcttgtcaaggctgctctccatgtagctgccaaaaaaagagagatgcgatattctgatcttcgaaacattgacaaaaaggtccgacgtcattttcacgatgatataactgtaattattttattcttaaacatgacctgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0135H21-7s2vm/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06SLm0135H21.1" temp_strand="+" temp_description="C06SLm0135H21.1  AC216666.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0135H21 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="43901" stop="48313"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="44201" g_stop="44231" g_length="31"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="31" r_length="31" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="44232" i_stop="45378" i_length="1147">
            <donor d_prob="0.981" d_score="0.00"/>
            <acceptor a_prob="0.830" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="45379" g_stop="45749" g_length="371"/>
          <reference_exon_boundary r_type="cDNA" r_start="32" r_stop="402" r_length="371" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="45750" i_stop="46323" i_length="574">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.977" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="46324" g_stop="46560" g_length="237"/>
          <reference_exon_boundary r_type="cDNA" r_start="403" r_stop="639" r_length="237" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="46561" i_stop="47858" i_length="1298">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="47859" g_stop="48013" g_length="155"/>
          <reference_exon_boundary r_type="cDNA" r_start="640" r_stop="793" r_length="154" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0135H21.1" gen_strand="+" ref_id="SGN-U331075" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>794</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0135H21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U331075" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="44201" e_stop="44231"/>
          <exon e_start="45379" e_stop="45749"/>
          <exon e_start="46324" e_stop="46560"/>
          <exon e_start="47859" e_stop="48013"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTTGTGATCACTTATTTCGACATTTCCAAGGTTTATCTTCTTTCTGTTTGTAATTTTTTTTATCTGTTTTATTGGAGAAAAAAAAGATGTTAAATTTGCTACATAGACAATCTTTAGTCAATCTACTGCGGCTCATATCGAAATAAGGATAGTCGATTTAAGTGGGGAATGTTGAATCAAGAATGAAGCAAGAGTAGCCCCAAGTCTTAATTAGTATTAGGATATGTCGATTTAAGTGGGGAAGCTTGAGTCAAGAGTAGCCCAAGTCTAATGAGTATTAGGATATGTTGACTTAAGTGGGGAAGGTTGATTCAAGAATGAGGCAAAACTAGGCTCAAGTCTAATCAGTTGAAGTCACAGGGCGGGGAGGGGGTCCTTGAGTGGATTCCACATTAGTCCCAAGACGTTGGTTTCTAACTAGAAAAGTGATCATTTAAGCTTTAGTGAGGAGGGGCCTTCATGTTTATTGACTTGAACAACTGACCTTTTAAATGAACCTATGAGTCAAAAAGGACTTAACTAAAGGCACCTGCTCAGTTATATGAATCTTTTGTATTCCGCTTAATTCGAGCCTATTTCATTCTAGAACCTTACTAAATTTTGTTTCTGGGAATAATCATAAGGATATGGAAATTCTCCGTGATGTCTGGTAGCAGTTGCATTGTACAACTGAAAAAGATCAACTCTTGAAAATCCCTGTTACAAAAATCCTAACTCTAGGTACCTTCTCTGCAGGTTTCTTGATGAATAGGGTGTGTGGATATTTTAGAGGCATTCTAGTCGAGGGGTTCAATTGCATAACTAGCTTATACCGTAAAGGGTTCCTAAATTATTATATAGAAATTCCTGATATCTACTTTGTTAATGTGTTCATGTAGTGGGTTGGTCTTCATTTGGGCCTTCTGCTCCATTACCATCTATAACTCCCAAAGTCCTAAAACCAGGGGCTTACATCTTCCATTGATTGTTTCCTTTTTCCTCAAAATTTTTGAAATACTGAAATATGTTGGATATATTTTCTTGATAATAGAAATCCGCGAGGGTCAATGGCACACATCATGCACTGCATTCTTAGTACTAGACCAAAGCCCTGAGGGTTACAAATTTGAATTTAGGTGTTGAACATTAGGAAAGGAAAACTTTTGTAGTGGTTTCATGGATTTTACCCTTAATGCAGCAATATCAGCTGAAGGAAATGGTGTAGTCACAGAGGAGACAATTCAAAGGGCCTTTCTTGAGACAGAGAGAGGGTTTACTTCTGTTGTTTCGGAAAATTGGCATTCTCGACCACAACTAGCAACAGTGGGGGCATGCTGCCTGGTTGGAGCTATATATCAGCAGACACTCTTTGTAGCAAATCTTGGTGACTCTCGTGTAGTCCTTGGAAAGAAGGTTGGAAACACTGGAGAAATTGCTGCCATGCAGCTATCAACGGAGCATAATGCCAATATTGAGTCTGTTAGGTGGGAGCAAAAAGACTTGCATCCAAATGATCCTCAAATTGTTGTTCTTAGACATGGTGTTTGGAGGGTAAAAGGAATAATTCAGGTAAGGTCAACTATACGAAAAGTTTCATGTTATTAAATTATGAAAAAAACTTCCAAATTCTCCCTGCATTTCCCATATTCCTATGCTTGTAAAGGATATGCGTAGGTGCTTTGATGTGTATCACGATCTAAAAGAGTAGTCTTATGTGAATAATTTTATTTCTATGGCCACTTACAGTAAATAATTGAGCTTCTGTCGGTCTTCTTTTTTCTGGGGAATTACCATGTTATGTATGGTCATATGGTGTAATAATGAACCCGAGTAAACTGAATTTGGGTAGAAAAGCAGGTTTAAAAACTTTCAAGATGACATCATGTTTTAAAGAAAAATTGATACGCGTCTCGAATATCTACTGTTTCTCATCGATTTTAATATTTTATGTCTTTATCGTTAGGATAAAGAATTCTGTTTTTTGGCTGAAAGTGTCACTAGTCTATGGTTGATCAGTTTGTACCTGTATGTCATACTTTCGAATTGGAGTTCTACAATTGTTGCTTTACATGGATAAAAATTAGAATTCATTCTCTAGTCTGCAACTTATTTCTTAGTAAACAGTCTCCTAAATTGACTGCAGGTCTCAAGATCCATTGGTGATGTTTATCTTAAACACACAAGATTTTGCAGGGAACCAACAAATGGAAAATTCAGAGTTCCTCAACCCCTTAATATGCCTATCCTGTTGGCCACTCCAACAATTTTAAAACATCCTCTACATCCAAATGACTCCTTCCTCATATTTGCTTCTGATGGTCTATGGGAGCACTTGAGCAATGAAAAGGCCGTTGAAATTGTGAAGAGTCACCCTCGTAAAGTAAGTTCTATGCACCAAACCATTATACTTTCCTTCTTATTCTGTTCAATTTAAGCTAATATGCTTCTTATGGGCAAACTATGACTTCAAATACATGTTTGCTTTTGATGATATACATAATTTTTATTTTTATTTTGATAATTCAAGGATAATTTTCAGTAACTACCAAGTATGTAGAAGTCTATAAAATCAAAGCGCATCAAACTACTGTAACTTAACCATCTATTAAGAGGAATACTGTATTCTTCTTACACTAAAGGCAAACCACACAGAAAACAAAAGAGATAGATATATATGCTAACCAAATCGGCAATCACACAGTGATATACATCCAGTGTACTAAATTGGACCATCCAAGAGTCAACTTCCTCATACACTCCATAAGTGCTTGTCTATACCAGCATAAGTACACATCCTACGATCACCCTCATGATTTCTGAATGATATCTTCAGACGTTACTTCTCTTTTAGGTTTTCAAGCTCTCTGGCATTCCCCATTAGATTTCAGCAACTTGTAGATGACTTCTCTAATGTCTTTCCATTATTTATACCCTGAATTTTCTCCTTAATTATTCCTTCATAATTTTATTGAAAAGTCGATCTCTTTAGCACCAAATAATCAGGTTTTCAGGTGAGAAGATGCTTTCACCTTCCAAGTTCTATTCTCCTTGTGATCTCTTTCAATTTCTGCGAGTAGGTGTGATGCCTCTTTGTGATGTCTTTTAAATGAAATGCTCAGACCTTCCAAATCTAGTTTGAAATGGGATCATTTGTTCCTACGGTGTATATTTTATTTTTATGGTGAATGGTGAAAGAAAAAGTAACAGAAGTGTACCAAAGATATCATGTATTTTCCAAAAGAGCTCTGTAACATATGAATGATAATCAAATGTTACTTTGATCTTGGGAGCACACCAGTGATTGAAGCCACTCAAGCTGTGGCCCTGCCTTGAAATTCCATTTGATTTACTCACAGTTATATCATCTTTACTCTCCATACTAACAACCCTGTAAACTCAGTACCATGCCAAATGACATAACTCTTATCCTTTTACTCTTCATGGTTCAATTTATTAATTAAGGCTTCCCTTCGAGATCCTCTCTCTCTCTCTCTCTATATATATATATATATATATCTTTCTCTTTGTTGAAGTGTATAAACACATGCCGGACATTTTGACTCTTTTAAAGAGATGGTTTTAGCTCGTTGTCCCTTCTGATGTATTTTGGTATGCACTCTTGAACGTGAAAATAAATCTGCTCACTTTTTCATGCTCATATTTTTCTTGCAAATACAGGGAAGTGCAAAGAGGCTTGTCAAGGCTGCTCTCCATGTAGCTGCCAAAAAAAGAGAGATGCGATATTCTGATCTTCGAAACATTGACAAAAAGGTCCGACGTCATTTTCACGATGATATAACTGTAATTATTTTATTCTTAAACCATGACCTGAT</genome_strand>
        <mrna_strand>GTTTGTGATCACTTATTTCGACATTTCCAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATATCAGCTGAAGGAAATGGTGTAGTCACAGAGGAGACAATTCAAAGGGCCTTTCTTGAGACAGAGAGAGGGTTTACTTCTGTTGTTTCGGAAAATTGGCATTCTCGACCACAACTAGCAACAGTGGGGGCATGCTGCCTGGTTGGAGCTATATATCAGCAGACACTCTTTGTAGCAAATCTTGGTGACTCTCGTGTAGTCCTTGGAAAGAAGGTTGGAAACACTGGAGAAATTGCTGCCATGCAGCTATCAACGGAGCATAATGCCAATATTGAGTCTGTTAGGTGGGAGCAAAAAGACTTGCATCCAAATGATCCTCAAATTGTTGTTCTTAGACATGGTGTTTGGAGGGTAAAAGGAATAATTCAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTCAAGATCCATTGGTGATGTTTATCTTAAACACACAAGATTTTGCAGGGAACCAACAAATGGAAAATTCAGAGTTCCTCAACCCCTTAATATGCCTATCCTGTTGGCCACTCCAACAATTTTAAAACATCCTCTACATCCAAATGACTCCTTCCTCATATTTGCTTCTGATGGTCTATGGGAGCACTTGAGCAATGAAAAGGCCGTTGAAATTGTGAAGAGTCACCCTCGTAAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAAGTGCAAAGAGGCTTGTCAAGGCTGCTCTCCATGTAGCTGCCAAAAAAAGAGAGATGCGATATTCTGATCTTCGAAACATTGACAAAAAGGTCCGACGTCATTTTCACGATGATATAACTGTAATTATTTTATTCTTAAA-CATGACCTGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0135H21-7s2vm/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U321656" ref_strand="+" ref_description="SGN-U321656        Tomato 200607 #1 [9 ESTs aligned] arabidopsis/peptide: AT4G23160.1 | Symbol: None | protein kinase family protein, contains Pfam domain PF00069: Protein kinase domain | chr4:12129496-12134198 FORWARD | Aliases: F21P8.50, F21P8_50 (evalue: 6e-05, score=33.1) genbank/nr: Peptidase,(evalue: 6e-12, score=75.1)">
      <seq>cggaagttagtgactactatggcagacaagatgagggaagaaattaagatagttcggacatgtgaagaggaggtgtgcggatgcaccaataaaaaggtgtgagaggctgactatgagaacacaccgtttctgcgaagaaggtatgtaagacagaggtttcctaacaaacgatattctccttctcttgattacttgttactaacagattcagtcagcttagctgttttgataaggcaatgcaggttgatagcaagttcaagtggattgaggaaatgatgaagtgtactcactccacataaatcaaagttgggggttggtcaaactaccagaagggaataagacaatccagaataatgtatgtacaggatgaaacagaagcataatagttcaatgaaatataaagcaaggttggtaataaaaggttttcaacaaaaggcatgtatcaatttactgagattttctcccttgtgattaaattacctactattcgagttgctttagaattgctgtagcataagatttatatttagagcatttagatgtaaggacagcctctctttatgatgatcaacatgaaagacgtgtatgcgtagcaacctgaagtgtacatacaggctgataagaaaaatatggtgcgtagactgaagaagagtctctatggtttgaaacaagcaccaagaccatacttaaagtttggcaggtttatgatgactattggcttacttggtataatgatgatcactgttcttacttcaagaaatttataaattcgtacatcactttgctcctgtatatggatgatatgttggtgacaggttaaaacatgtgtgggatcacaaaactgaaggagcaaatgtctagtgaattttttgataaagaatttgggactggaaattgaaagagacaggttgaagctgagtcagaagaaatagattgaaaaaataattcttaaagaggctaaacatttgggatgccaagttggtgcacttcaagaaaatctgaaagcaagtcctttggcaggtcacttgaattgggattgtttttggcaagcgtagaagttaactttgtttgaaagaaagaatcttgagacacaggtttcatagaggagcagattacaaagtgttgctttattgcagaagttgatttggtgagctccacccttcaccgtggaatttcttcttttttcagttagaattttttttaattcagtttttggggaatagc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0135H21-7s2vm/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06SLm0135H21.1" temp_strand="-" temp_description="C06SLm0135H21.1  AC216666.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0135H21 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="59551" stop="57105"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="59251" g_stop="58164" g_length="1088"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="1088" r_length="1088" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="58163" i_stop="57541" i_length="623">
            <donor d_prob="0.635" d_score="1.00"/>
            <acceptor a_prob="0.212" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="57540" g_stop="57405" g_length="136"/>
          <reference_exon_boundary r_type="cDNA" r_start="1089" r_stop="1224" r_length="136" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0135H21.1" gen_strand="-" ref_id="SGN-U321656" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>1224</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0135H21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U321656" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="59251" e_stop="58164"/>
          <exon e_start="57540" e_stop="57405"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGGAAGTTAGTGACTACTATGGCAGACAAGATGAGGGAAGAAATTAAGATAGTTCGGACATGTGAAGAGGAGGTGTGCGGATGCACCAATAAAAAGGTGTGAGAGGCTGACTATGAGAACACACCGTTTCTGCGAAGAAGGTATGTAAGACAGAGGTTTCCTAACAAACGATATTCTCCTTCTCTTGATTACTTGTTACTAACAGATTCAGTCAGCTTAGCTGTTTTGATAAGGCAATGCAGGTTGATAGCAAGTTCAAGTGGATTGAGGAAATGATGAAGTGTACTCACTCCACATAAATCAAAGTTGGGGGTTGGTCAAACTACCAGAAGGGAATAAGACAATCCAGAATAATGTATGTACAGGATGAAACAGAAGCATAATAGTTCAATGAAATATAAAGCAAGGTTGGTAATAAAAGGTTTTCAACAAAAGGCATGTATCAATTTACTGAGATTTTCTCCCTTGTGATTAAATTACCTACTATTCGAGTTGCTTTAGAATTGCTGTAGCATAAGATTTATATTTAGAGCATTTAGATGTAAGGACAGCCTCTCTTTATGATGATCAACATGAAAGACGTGTATGCGTAGCAACCTGAAGTGTACATACAGGCTGATAAGAAAAATATGGTGCGTAGACTGAAGAAGAGTCTCTATGGTTTGAAACAAGCACCAAGACCATACTTAAAGTTTGGCAGGTTTATGATGACTATTGGCTTACTTGGTATAATGATGATCACTGTTCTTACTTCAAGAAATTTATAAATTCGTACATCACTTTGCTCCTGTATATGGATGATATGTTGGTGACAGGTTAAAACATGTGTGGGATCACAAAACTGAAGGAGCAAATGTCTAGTGAATTTTTTGATAAAGAATTTGGGACTGGAAATTGAAAGAGACAGGTTGAAGCTGAGTCAGAAGAAATAGATTGAAAAAATAATTCTTAAAGAGGCTAAACATTTGGGATGCCAAGTTGGTGCACTTCAAGAAAATCTGAAAGCAAGTCCTTTGGCAGGTCACTTGAATTGGGATTGTTTTTGGCAAGCGTAGAAGTTAACTTTGTTTGAAAGAAAGAATCTTGAGGTGAGTTGCGACTTGTTCTTACTAAAGTTCTTTCCTGAAGAGATCATGTCCCATAAGTTATTTGAATTAATGTTTCTAAAGTATTAATGTGAGCTAAACTGGAATGAGTGAGCTCACATTGCGCATCATTGAATGAGTCTTTCTCGTGCTCTATTTTCTGCTTTGTGTTTATCCGTCTAATGGAAGTCTACTTATTTGTGTATGAGTGCTTTGTGGTAACTCTTTTCAGCCCTAAAACAGTACCTAATTCCCTGGAAAGATGACCAAGAAAAGACAACATATCCCATCAAGAATTGTGTCGTCTTTCATAGTGACAACAGCCATAATGTACTCTCTTATGCATGGTTATGATAAAGATAAAATGTAAAAAACTTCAATGCGAAATTTTAATAAATGGCAATCGTATAAAGATTACTAACTTTAAGGGATTAACATGAATGATGATCCATATAAAGAGTCATCGAGCATCCATATTTGTATTTTCTTTCTTATCCGTTCATCAAGTACATGTTTTCATCTTATGCCTTGGTTTGAGTTCATTGAGGAGAACGCTGAGACCTCTACTGTCAGTAGTATACTGACGTTCTCTTTTGTGGATTCTATATTGACCTATGCCAATATAGACACAGGTTTCATAGAGGAGCAGATTACAAAGTGTTGCTTTATTGCAGAAGTTGATTTGGTGAGCTCCACCCTTCACCGTGGAATTTCTTCTTTTTTCAGTTAGAATTTTTTTTAATTCAGTTTTTGGGGAATAGC</genome_strand>
        <mrna_strand>CGGAAGTTAGTGACTACTATGGCAGACAAGATGAGGGAAGAAATTAAGATAGTTCGGACATGTGAAGAGGAGGTGTGCGGATGCACCAATAAAAAGGTGTGAGAGGCTGACTATGAGAACACACCGTTTCTGCGAAGAAGGTATGTAAGACAGAGGTTTCCTAACAAACGATATTCTCCTTCTCTTGATTACTTGTTACTAACAGATTCAGTCAGCTTAGCTGTTTTGATAAGGCAATGCAGGTTGATAGCAAGTTCAAGTGGATTGAGGAAATGATGAAGTGTACTCACTCCACATAAATCAAAGTTGGGGGTTGGTCAAACTACCAGAAGGGAATAAGACAATCCAGAATAATGTATGTACAGGATGAAACAGAAGCATAATAGTTCAATGAAATATAAAGCAAGGTTGGTAATAAAAGGTTTTCAACAAAAGGCATGTATCAATTTACTGAGATTTTCTCCCTTGTGATTAAATTACCTACTATTCGAGTTGCTTTAGAATTGCTGTAGCATAAGATTTATATTTAGAGCATTTAGATGTAAGGACAGCCTCTCTTTATGATGATCAACATGAAAGACGTGTATGCGTAGCAACCTGAAGTGTACATACAGGCTGATAAGAAAAATATGGTGCGTAGACTGAAGAAGAGTCTCTATGGTTTGAAACAAGCACCAAGACCATACTTAAAGTTTGGCAGGTTTATGATGACTATTGGCTTACTTGGTATAATGATGATCACTGTTCTTACTTCAAGAAATTTATAAATTCGTACATCACTTTGCTCCTGTATATGGATGATATGTTGGTGACAGGTTAAAACATGTGTGGGATCACAAAACTGAAGGAGCAAATGTCTAGTGAATTTTTTGATAAAGAATTTGGGACTGGAAATTGAAAGAGACAGGTTGAAGCTGAGTCAGAAGAAATAGATTGAAAAAATAATTCTTAAAGAGGCTAAACATTTGGGATGCCAAGTTGGTGCACTTCAAGAAAATCTGAAAGCAAGTCCTTTGGCAGGTCACTTGAATTGGGATTGTTTTTGGCAAGCGTAGAAGTTAACTTTGTTTGAAAGAAAGAATCTTGAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACAGGTTTCATAGAGGAGCAGATTACAAAGTGTTGCTTTATTGCAGAAGTTGATTTGGTGAGCTCCACCCTTCACCGTGGAATTTCTTCTTTTTTCAGTTAGAATTTTTTTTAATTCAGTTTTTGGGGAATAGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0135H21-7s2vm/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U341207" ref_strand="+" ref_description="SGN-U341207        Tomato 200607 #1 [1 ESTs aligned]">
      <seq>tcataaccatgcataagagagtacattatggctgttgtcactatgaaagattacacaaagattgatgggatatgtcgtatttgcttggtcatctttccagggaattacgaactgatttatggttgaaaagagttactacaaagaagaagatagagcacgagaaagactcattcaatgatgtgcagtgtgaactcactcattacagtttagctcacattaataccttagaaacattaattcaaataacttatggggcatgatctcttcaggaaagaacttgagtaagaacaagtc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0135H21-7s2vm/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06SLm0135H21.1" temp_strand="+" temp_description="C06SLm0135H21.1  AC216666.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0135H21 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="57513" stop="58454"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="57813" g_stop="57956" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="144" r_length="144" r_score="0.896"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="57957" i_stop="58006" i_length="50">
            <donor d_prob="0.000" d_score="0.86"/>
            <acceptor a_prob="0.000" a_score="0.85"/>
          </gDNA_intron_boundary>
          <shorter_than_min_intron_len/>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="58007" g_stop="58154" g_length="148"/>
          <reference_exon_boundary r_type="cDNA" r_start="145" r_stop="294" r_length="150" r_score="0.926"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0135H21.1" gen_strand="+" ref_id="SGN-U341207" ref_strand="+">
        <total_alignment_score>0.911</total_alignment_score>
        <cumulative_length_of_scored_exons>292</cumulative_length_of_scored_exons>
        <coverage percentage="0.993" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0135H21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U341207" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="57813" e_stop="57956"/>
          <exon e_start="58007" e_stop="58154"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCATAACCATGCATAAGAGAGTACATTATGGCTGTTGTCACTATGAAAGACGACACAATTCTTGATGGGATATGTTGTCTTTTCTTGGTCATCTTTCCAGGGAATTAGGTACTGTTTTAGGGCTGAAAAGAGTTACCACAAAGCACTCATACACAAATAAGTAGACTTCCATTAGACGGATAAACACAAAGCAGA-AA-ATAGAGCACGAGAAAGACTCATTCAATGATGCGCAATGTGAGCTCACTCATTCCAGTTTAGCTCACATTAATACTTTAGAAACATTAATTCAAATAACTTATGGGACATGATCTCTTCAGGAAAGAACTTTAGTAAGAACAAGTC</genome_strand>
        <mrna_strand>TCATAACCATGCATAAGAGAGTACATTATGGCTGTTGTCACTATGAAAGATTACACAAAGATTGATGGGATATGTCGTATTTGCTTGGTCATCTTTCCAGGGAATTACGAACTGATTTATGGTTGAAAAGAGTTACTACAAAGA..................................................AGAAGATAGAGCACGAGAAAGACTCATTCAATGATGTGCAGTGTGAACTCACTCATTACAGTTTAGCTCACATTAATACCTTAGAAACATTAATTCAAATAACTTATGGGGCATGATCTCTTCAGGAAAGAACTTGAGTAAGAACAAGTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0135H21-7s2vm/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U318926" ref_strand="+" ref_description="SGN-U318926        Tomato 200607 #1 [15 ESTs aligned] arabidopsis/peptide: | Symbol: None | serine-rich protein-related, contains some similarity to serine-rich proteins | chr5:8773795-8776003 FORWARD | Aliases: None(evalue: 4e-42, score=168) genbank/nr: hypothetical(evalue: 6e-49, score=197)">
      <seq>atcttctcccacctataaatttacccttcgacactcgctaggtttgccaaactgaaaagccttagggcactttttaagagatctatacaaacagaaattgtttatatagatcttcactgaaaatggcgaattcctctagaaggccgagtgggccagtgttgcttaaatcggcgtttgagaggtcaatctcacctaccggcaggttctgtaacaccaccaccacagcaactgatgcgatgtcgttcgcttcgtacagcaactctagcttttattcctctccgtcgaccggctgtttcaaccgatcggcttctccgacgcgcgtgaatcttcacgctctggcgccggtgaattcttcgcctagcgttaggttctccattgacagatccatttctcctcggcgttccatggcggtgtctcaacgtgatcaggtggttcggaagcagatcccgaagaggacgtgcttatgctcacctacgacgcatcctggttcgttcaggtgtagtatgcataagaatgtgaagaatactccttcgatttcgtattcccctagccgattgaatgcacggagatcggcgatgacaaattcactggtgcgtatctgttctgttgaaggtgatttagtgaaacgagctttggctgctcttattaggccatcgtcgcatcatcagagacgtcgaggtgactttcaaccgcgtcctagccggctttccagaatgtccaaagctgataacctgtgaaatttccgtggtaacaggttggtgattttcatatattaactgaggctcatctcttgagagttttccggcggcggcgtctgatcctggctgcggttcttactactccggtgaaatgaaagctgtagggcaattttgatgcagtatggaagtagtagaattctcccttgtacatatggttttgttgcagtaactgattgcaattgaaaggacaatttggacttttaaaatctaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0135H21-7s2vm/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06SLm0135H21.1" temp_strand="-" temp_description="C06SLm0135H21.1  AC216666.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0135H21 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="62501" stop="60928"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62201" g_stop="61216" g_length="986"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="986" r_length="986" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0135H21.1" gen_strand="-" ref_id="SGN-U318926" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>986</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0135H21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U318926" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="62201" e_stop="61216"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCTTCTCCCACCTATAAATTTACCCTTCGACACTCGCTAGGTTTGCCAAACTGAAAAGCCTTAGGGCACTTTTTAAGAGATCTATACAAACAGAAATTGTTTATATAGATCTTCACTGAAAATGGCGAATTCCTCTAGAAGGCCGAGTGGGCCAGTGTTGCTTAAATCGGCGTTTGAGAGGTCAATCTCACCTACCGGCAGGTTCTGTAACACCACCACCACAGCAACTGATGCGATGTCGTTCGCTTCGTACAGCAACTCTAGCTTTTATTCCTCTCCGTCGACCGGCTGTTTCAACCGATCGGCTTCTCCGACGCGCGTGAATCTTCACGCTCTGGCGCCGGTGAATTCTTCGCCTAGCGTTAGGTTCTCCATTGACAGATCCATTTCTCCTCGGCGTTCCATGGCGGTGTCTCAACGTGATCAGGTGGTTCGGAAGCAGATCCCGAAGAGGACGTGCTTATGCTCACCTACGACGCATCCTGGTTCGTTCAGGTGTAGTATGCATAAGAATGTGAAGAATACTCCTTCGATTTCGTATTCCCCTAGCCGATTGAATGCACGGAGATCGGCGATGACAAATTCACTGGTGCGTATCTGTTCTGTTGAAGGTGATTTAGTGAAACGAGCTTTGGCTGCTCTTATTAGGCCATCGTCGCATCATCAGAGACGTCGAGGTGACTTTCAACCGCGTCCTAGCCGGCTTTCCAGAATGTCCAAAGCTGATAACCTGTGAAATTTCCGTGGTAACAGGTTGGTGATTTTCATATATTAACTGAGGCTCATCTCTTGAGAGTTTTCCGGCGGCGGCGTCTGATCCTGGCTGCGGTTCTTACTACTCCGGTGAAATGAAAGCTGTAGGGCAATTTTGATGCAGTATGGAAGTAGTAGAATTCTCCCTTGTACATATGGTTTTGTTGCAGTAACTGATTGCAATTGAAAGGACAATTTGGACTTTTAAAATCTAATTAAACCGATTAAAATT</genome_strand>
        <mrna_strand>ATCTTCTCCCACCTATAAATTTACCCTTCGACACTCGCTAGGTTTGCCAAACTGAAAAGCCTTAGGGCACTTTTTAAGAGATCTATACAAACAGAAATTGTTTATATAGATCTTCACTGAAAATGGCGAATTCCTCTAGAAGGCCGAGTGGGCCAGTGTTGCTTAAATCGGCGTTTGAGAGGTCAATCTCACCTACCGGCAGGTTCTGTAACACCACCACCACAGCAACTGATGCGATGTCGTTCGCTTCGTACAGCAACTCTAGCTTTTATTCCTCTCCGTCGACCGGCTGTTTCAACCGATCGGCTTCTCCGACGCGCGTGAATCTTCACGCTCTGGCGCCGGTGAATTCTTCGCCTAGCGTTAGGTTCTCCATTGACAGATCCATTTCTCCTCGGCGTTCCATGGCGGTGTCTCAACGTGATCAGGTGGTTCGGAAGCAGATCCCGAAGAGGACGTGCTTATGCTCACCTACGACGCATCCTGGTTCGTTCAGGTGTAGTATGCATAAGAATGTGAAGAATACTCCTTCGATTTCGTATTCCCCTAGCCGATTGAATGCACGGAGATCGGCGATGACAAATTCACTGGTGCGTATCTGTTCTGTTGAAGGTGATTTAGTGAAACGAGCTTTGGCTGCTCTTATTAGGCCATCGTCGCATCATCAGAGACGTCGAGGTGACTTTCAACCGCGTCCTAGCCGGCTTTCCAGAATGTCCAAAGCTGATAACCTGTGAAATTTCCGTGGTAACAGGTTGGTGATTTTCATATATTAACTGAGGCTCATCTCTTGAGAGTTTTCCGGCGGCGGCGTCTGATCCTGGCTGCGGTTCTTACTACTCCGGTGAAATGAAAGCTGTAGGGCAATTTTGATGCAGTATGGAAGTAGTAGAATTCTCCCTTGTACATATGGTTTTGTTGCAGTAACTGATTGCAATTGAAAGGACAATTTGGACTTTTAAAATCTAAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0135H21-7s2vm/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U323857" ref_strand="-" ref_description="SGN-U323857        Tomato 200607 #1 [6 ESTs aligned] arabidopsis/peptide: | Symbol: None | expressed protein | chr5:8799713-8802649 REVERSE | Aliases: F18G18.100, F18G18_100(evalue: 1e-50, score=197) genbank/nr: gi|15239401|ref|NP_197918.1| expressed protein [Arabidopsis thaliana] gi|28973729|gb|AAO64181.1| unknown protein [Arabidopsis thaliana] gi|29824197|gb|AAP04059.1| unknown protein [Arabidopsis thaliana](evalue: 9e-49, score=197)">
      <seq>ttttttttttttttttttttttttttttttttttttttttttttttttttggagagaatatttttcagcctatatatatataatataacagtgatacacctcaaccattgagaaggggttgatattttacaaaaagaagctcagaagggataggaaagatacaagaatttttaagtaacctcgcaagctcaagggttatacaaagtgttacggacttgcaaggtcaagaaaactcgagcccaccaggaatttctctgattctttaagattttcagcgcttattcaccaacccaaagatcaacaacaaaatctcatcccgcaactacgcttttttcacaggtggggggatgtgttttttttttctgtattggaggtccagagggttgaaatctgtgctttgacgaaaacccatttgcttgtaaatgcaactttgtagatcaattgcctcttggatataccgcatattggcttgcatgggaagttgtcttggatgctgtgtgaattctcctcatgttgattcagtggataagccatctaaaggactgaaagttcctagcaaacgattgaggaaaactagtttaagagacgacttttggagcactagtgcatgcgagatggagaatagcacatttccctcccagagaagcatctcatcaattagcacatctaatccggcccttgatcctcacagtaattctggcaccacgagcagcacttcggaatttgtaaatcatggtctacttctttggaatcaaacgaggcaacaatggtgtggaaataaaacaccacagaagggtgcctcagttcgagaacccaaattaagttcggatacaaattatgtaacgttgctagggactaataagcttttccctcagccaatccctctaccggaaatggtagactttcttgttgatgtgtgggagcaggaggggctttatgattaagcagccacataactcatcattctcagcaactgcaaattgtgtttctgcaagtttttatcacattaattggatgttttataaggacttctaaaatattaaaataaaaaatgatatccaaaagttaaatgaagatattttaatttttaaaaaaaaaaaaaaaaaaactcgaga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0135H21-7s2vm/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06SLm0135H21.1" temp_strand="+" temp_description="C06SLm0135H21.1  AC216666.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0135H21 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="48816" stop="77965"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64119" g_stop="64232" g_length="114"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="112" r_length="112" r_score="0.545"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64233" i_stop="64470" i_length="238">
            <donor d_prob="0.907" d_score="0.55"/>
            <acceptor a_prob="0.929" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="64471" g_stop="64479" g_length="9"/>
          <reference_exon_boundary r_type="cDNA" r_start="113" r_stop="118" r_length="6" r_score="0.556"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="64480" i_stop="68622" i_length="4143">
            <donor d_prob="0.900" d_score="0.00"/>
            <acceptor a_prob="0.592" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="68623" g_stop="68647" g_length="25"/>
          <reference_exon_boundary r_type="cDNA" r_start="119" r_stop="139" r_length="21" r_score="0.720"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="68648" i_stop="69874" i_length="1227">
            <donor d_prob="0.762" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="69875" g_stop="69882" g_length="8"/>
          <reference_exon_boundary r_type="cDNA" r_start="140" r_stop="147" r_length="8" r_score="0.875"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="69883" i_stop="70115" i_length="233">
            <donor d_prob="0.143" d_score="0.00"/>
            <acceptor a_prob="0.667" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="70116" g_stop="70139" g_length="24"/>
          <reference_exon_boundary r_type="cDNA" r_start="148" r_stop="167" r_length="20" r_score="0.625"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="70140" i_stop="70538" i_length="399">
            <donor d_prob="0.581" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="0.58"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="70539" g_stop="70594" g_length="56"/>
          <reference_exon_boundary r_type="cDNA" r_start="168" r_stop="220" r_length="53" r_score="0.589"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="70595" i_stop="71906" i_length="1312">
            <donor d_prob="0.000" d_score="0.56"/>
            <acceptor a_prob="0.000" a_score="0.80"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="71907" g_stop="72027" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="221" r_stop="339" r_length="119" r_score="0.917"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="72028" i_stop="72299" i_length="272">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.980" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="72300" g_stop="72438" g_length="139"/>
          <reference_exon_boundary r_type="cDNA" r_start="340" r_stop="478" r_length="139" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="72439" i_stop="76102" i_length="3664">
            <donor d_prob="0.975" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="76103" g_stop="76359" g_length="257"/>
          <reference_exon_boundary r_type="cDNA" r_start="479" r_stop="735" r_length="257" r_score="0.988"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="76360" i_stop="77002" i_length="643">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="77003" g_stop="77090" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="736" r_stop="823" r_length="88" r_score="1.000"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="77091" i_stop="77314" i_length="224">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.919" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="77315" g_stop="77381" g_length="67"/>
          <reference_exon_boundary r_type="cDNA" r_start="824" r_stop="890" r_length="67" r_score="1.000"/>
        </exon>
        <intron i_serial="11">
          <gDNA_intron_boundary i_start="77382" i_stop="77465" i_length="84">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="12">
          <gDNA_exon_boundary g_start="77466" g_stop="77664" g_length="199"/>
          <reference_exon_boundary r_type="cDNA" r_start="891" r_stop="1089" r_length="199" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="1090" polyA_stop="1109"/>
      <MATCH_line gen_id="C06SLm0135H21.1" gen_strand="+" ref_id="SGN-U323857" ref_strand="-">
        <total_alignment_score>0.952</total_alignment_score>
        <cumulative_length_of_scored_exons>1107</cumulative_length_of_scored_exons>
        <coverage percentage="0.993" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0135H21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U323857" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="64119" e_stop="64232"/>
          <exon e_start="64471" e_stop="64479"/>
          <exon e_start="68623" e_stop="68647"/>
          <exon e_start="69875" e_stop="69882"/>
          <exon e_start="70116" e_stop="70139"/>
          <exon e_start="70539" e_stop="70594"/>
          <exon e_start="71907" e_stop="72027"/>
          <exon e_start="72300" e_stop="72438"/>
          <exon e_start="76103" e_stop="76359"/>
          <exon e_start="77003" e_stop="77090"/>
          <exon e_start="77315" e_stop="77381"/>
          <exon e_start="77466" e_stop="77664"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATCCGACCTAGATAATCCCACGTAACATCTTTACTCCCATGACAAAAACATTCTAATTTGTACTTCTGATACATGCACAAATGGAAGAAAACAAAGGAACTACAAGCTCAGTGCACAACAACCCATTTTTCCCCGTACACATCCTCAATAAACTACACTACTAAATGCTAGCAGAATTTTGAAATGATGGAAATCGGAAGACTTCTACTTTCAAGTAGAACTGGCAGAGGACATTACATCTTGCATAAATTTTTTGCAGACTGGACGGATCTCCTTGCTGAGCGTTGCTGAAAACATCATTACTTGCTTGTCATGGGGAGTCATCTTGAAGATTGCCTGCACATCTCTCCTCATGTCTGCAAACATAGTACAGGTAATGAGTTGCTAAAAAATAGTGTCACGGAAATAGGCAACTAGAATCATGAAAGCAGAAAATTAAGCTAAGACATACCAAGTGAATCAAGCATCTTGTCACATTCATCCAGAATAAAATGCCTCACATTCTTCAGAGGAAGGTCTTTATCTCTAGCCAATGCAAGTACTCTTCCAGGAGTTCCAACAACAATATGAGGACATTCATTCTTCAGAAGCTCCTTGTGAAGTTTGATATTGACACCACCATAGAAGACAGCAACCTTGATATCAGGTAAATATGTGCTGAACCTCTCAAATTCATGACAGATCTGCAGACAACAAAAGAACCCCACAAAAAAAGAGGATTACTAGATATGTTTGGAGAGGAAAAATATGATTAGTGAAGCAGAACAGCAGATTCCATTGCATACCTGATAAGCTAATTCCCTTGTATGACATAGGACCAAAGCAGCAACCTGACCAGGAACAGGTTCAATCTGCTGCAGAGTCGAAAGAACAAAAACAGCAGTTTTGCCCATTCCAGATTTGGCTTGACAAATAACATCCATACCCAGAATAGCTTGTGGAATACACTCATGTTGCACTGATGAAGAACCAAATAGAGTGGAGCCAAAAAGGCCTCAGTTTCAGTTTTAAAAAGTTTACCACAGTACACTTCTCCAAAATAGTAGTGATAGTAATAATTTACCTGAAAACAGATAGAGAAATAGATTGTCAAGAACCCATTAAAAAGGCAAACAGGGTGTTACCAAAATCAATGAATGAATAAACAAAATAGAAAAAATGAACTGAACACAGCGTGCATTACTGGGTGTTCCAATTTTTAAGCATTTGTTTTCAAAAAAGTACATGTTTGCTTCATTTGAAGCTTAACACCCTTGGAAAACGAAGATCCTCTTATAGCACTGGTGAAAGCATAGAGTATACTCCCTCTCCACCTCCTGCTCCCAGAGAAAAACTTCTTTTTTAATAGTTGGATAAAGAAGGTGAATTGTAGATAGATATACACATACACCAAACAGAGTAACAAAAAAGAATATTCTGATTCTTTGAAGAAGGAAATTGTGTGAGACTGTTGAGTGCAGTTGGAGAAATAGATGTAACAACCCAAACCAAGCAAAAACAGTTCTTATTTTATTTTTCGGCCAAGTTCTTTGGTGACAACGCAAATAATATATACACTCATTGTTTCTGGCATCTTCTTTTTTCCAGTTCTCTTATGTATCACTATAAGCCATCTTAGGAAGCCCAAATTAACCTGCGCTATTTAATAGGTTAAGTTCAACTGTATCCATACTGACCATCTATGAGCATTATCCTTGTTTATTGGCGTGTTGGGTTGGATTACAATTTTAAGGGCTAAATATGACATCTCTGAAGAACAGTATTCTCAACCACTAGCATACTGAATGTTGCACAATTTCAACAAGAAAACTCATAAATTAATGAGTGAAAAAACAAAACCACAGAGATCAAAATGCCTTCAAAGATGGTCAAATTTAGCCCATGCAAGTGTAACTCAGTTAACCCATGCCCATCTTCCACACATGTTTGACCACTAGCTGAATAGCATGGTGGACAACTTGACACCACGCGGAAAAATATTCTTATTGGCAGTTAAAATATCAAAAAAGGAAATATTAACACCCATAGAACAACAAATTTGCAAAATCAATGTACAGATAAGAGATGACTTGCCTTCAGAGGGATGCTCAAACCCTGAATCCACAATAGCCCGCAGTAGCTCTGGCTTTAAAAGAAAGTCTCTGAATCCAGAACTGTGAATTCCAACATAACCCCTACATTGACAAAAACATTTAGACTTAGTATAATATCAAAATCACAGACTTAAGAAGAAGAAAAGAAGAATATTAATCAGATATGGTGGCGTATTAACCATTTATTCAGTAGGTGCACAGTTATATTTACTGCTAAAATGGAAATAAAAGAGATCCTTACTTCTCGCTATATGTACATGACTACATGACAGAAGACCTTAGCTTTTCCAACTCAAACTATATTAAAAAGAACAAGAAAAAATATTTACCCTAAGCACTTTGCACTCTCAATCTCAGTTTATAAAGTTGAGGCACAACAATCGAATTGATTATCCCAATGAACAAGTATACTCTATTACTTAGTAGAAAATATTATAGAACAAACACAAGCCACACCACTTGCTTTACACACATTGGGTCAAACTTCAGGGTCAACTTCTATGTTAAGCATCACAGAACAATACAAATTTCAAAAAAAAAAAAGAAGAGAACGAAAAATAGAAATTTAAGTAAAGCTCACTTCTTGGCAGATTCGCCGTTAACTTTTCCATTAACGGAATCTGGGGCCTTCTCATCATCTTCTTCGTAGTCGAGAAGTTCTTCCTCGTAAGCTTCGTTCTCCTTTGTATCTCCCATCTTAGCTACTTTACTGTAAATGTGAATCGAAGATCTCATTAAGCAAATAGTATCAAAATTCAGATCAGTAAACATGAATACTTAGTTTTCTAGACTAAAGATCAAATCTTTCAAAGTTCAAACTAAATCGCAGAGAATAAAAAAGAAAACTTTCTCACAGGGGAAGTGTTTACCAGTTGGACACTGCCGGAAAAGCTGAGTTCTTGCGGCGAATTAGGGTTAGGGTTTGGAGCGTCTGCAGAAAAAAATGTTAGTAGAACTAAAAAGTGTGTGATAAGTATGTTTGAATTGAAAGGGGATAGGTTAATAAAGAGGGATACTGAAATTTGTCTACCATTTTTGTCCTTGTGTTTTATCATAATTACGGTTTTGTACAAGTTGGGAATGGTAGATTTGAAATTTGGGAGGTCTATGTATAAATATTTTTTCCAAGTTTCCTTATAATTTTTTTTTTAGAAAATTGTATATAATAGCAAACTAATAATCTAAAATAAATAGAGTAGCTAGGGTTTGATTTAATTCTGCTCCACAGCAAATGTTTGCAAAAAATTGTCAGGTGCCTCTCTCTCAAATATCTCACTCGCCACTCTCCTCCAATCTCTCACTCGCTTCTTCACTTTTCATACAAACACAAGTGTATAAAAATTGTTTCTAATTGTATAAAGCAGAGAAAATTATATAAATACATATTTTTGTTCCCTCTCTCCCCTTTTCTAGATCTCACTCGCCACTCTCCCAAATCTCGCTTGCCACTCTCGACTTTCTCATTTATACAAACAGAAACAAAATATATAAATTGTGTTTCTGTTTGTATAAAGCGTGAGAAAATTGTATATACACATGCAAGTACACATATTTTCGTCCTATACACTTATAATTATACAATAAAAATACTCTCCTACCTAGTTTCCTTTGCCTTTCTCTTTCTCGTTTTATACATTTTTCAAATTGTATCTAATTTTTCTCTTTCTAGTTTTATACAATTCGATTCAATTATATATTCCGTATCAAGTCTCTTTTGTCTCTCTCTTTCTCATTTTATACAAATTCAAATTATATATAATCGTTCTTACACTTATAATAATACAATTCATTTTAACACTTCGTTTTTATACAGTTTTCTGCCCAAGTGTCTTTCTCTTTCTTGTTTTATACACTTCATTTTATACAATTTGCTTCAACTGTATATGTATAGCGAATTATACAGTTTCTATGTTTGCTATGGAGCGCAATAATGCAAACTTTCCTATAGGATACAAATATAAATTTTTTATTTACTACATGCGAAAGTTACCCTTTTTGTTTATCTTTCTCCTACACTCTTCCATTTTTTTGGCCCAATTCTTTCAATTTCTATTGTACTTTAACCACTGGTTATGATACCATTCGAATTTGATATTATATTATATAAATTCGATAGTTATTATTTCATAATAAATATAATACATTTTTAACAATGTAAACTAATTTAAATAGTATCAAAGTATTTGAAATTCACACATAATACAGATAATATATTTGTTTTATATAATTTTTGTTTAAATATTTAGTAAAATTTTTAAAAAATTCTATTTAAATTGTATCAAAATTGTGTTAGATATAAACAAGTGGCGGTTTGATAGTGTGATGATTTACCCAAAAAAAGAGGTGACGTTCTTGAACATTGATAATGATCATGCTATTTGTGTTTTAAAAAATAAGGCTAACATATGTAAGAGGACATATATCTTATAATTTGTAAATAAAGTTATATAATATATTATTTATGTAAATTGGCATTTTTAACTTTTTTTTTTAATGATTGAATGTCTGAATTAAATTTCACGACTTTAATTAATTTTATGAAATATTTATTGTTTTTCTATAAAAAGTATTGGTAAATTTGTTCAATTAGTTTGAGGTAAATTGAAAGAATCACCTAGTTTTTTTGTTCTTACTAAAATATTAATCGACAAAATGATCTACAGCTCTCCCCCTAATTTATATTCGAATTTTTAAGTACACATTTTAACTTTACAAGAGTCTCATCACCCACCTGAATTGTTTAAAATTGTAATAATTACATCCTTAAAAAGCCACAATCACATCTATCTAGGCATGTGAACTTCACACGGAAATTGATTGATTTTTTTAAAATTTTTCTCATAATTTTTTTTAACTTTCTCCTATACTCTTCTAATTTCTTCACCCAATTCTTTCAAATTCCTATTGAATTGTGAGGAATAAAGGTAGGGGAGAAAGAGTAGGTTTTCATGGTGGTTATCTTGAAACGAGAGATATAAGATTAGAGGGGGAGGGGAGAACGGGTCTCTATTGGTGGTTTGGATTTTGCCGGAGGAAAAGACAATGGTGGATAGTTGGAGCAACAAAGATAGGGGAACAAAAATTATAAACTAAAAAAAGTGAGCAAGGAAAGATGGAGGACGAATGAAGGCATCAATGCCATTAATGGAGGTCAACTATGACGATTACAATCCACTTATTGATTGAGATTTGACATTGATAATCAAAGAATATAAATTATAAAAAAAAACATCCTCATTTGGGAGTTTGATTGAATTTGATTTGTTGATGAGAACTGATCCAAATATTATTTTTTTTGAATGATGTAAATACATATCATTTTATTTTCAATTGAATTGATTGATTTTCAAAAGTTTTTTTTACATAAAAGTTTTTAAAATTGTGTGAAATTTACAATGATGAATCTACTGAAGAATTTGGTCTATATTGCTATGGAGAAGAAGACTATGAATAAGAAAATTAAAAATAAATTTTTTAATGTTTGTTTTTTATGCTCATTCTCTCAAAGAGAGTGACCATTCTCTTTGTCAGCTAAGTGTTGGATGATGTATTAATTTCAATTTTAAACACTTCAGAAGGTGATAGAATTTTCGTAAAGTTTAAGTGTGTAATTGAAAATCTAAATATAGATTAGAGAAGTTTTTGGCCATTTTCTCATTTTAGTATGAAATTCCATAATTCTTAACTATTTCCTTAACTACTAACTCAACTAATGCGCCATAAAAAAAGAAAAACTTGAAGATTATCTTTTTATTATTATTATTATTATATTCTTCAATTTTATGACAAGTCTATAACTTCACAATCGTAGGGAAAAAAGATTTGACTACAACAAGCATCACAAGTAACATAACTTATTATACTATTTCTTCTCGGTCCTTTCTTTGAGTTATAGGAACAGAAGGTCAAATTTCAATTATTGAAAAAAGTTAATAAATGAATGTAATATGGTGATGGTAAGATGGAATAGATAATTCAATAAATGACATAAAGATGGAAAATGTTTATCCTCAAAATCTATCCATGAAGATAGAATATTTATCTTTACTTTTGAAACTTAGATTTAAATTTACAAAGGAATGGACTAATTAAATTATTTTGAACATTGTTTTCAATGAATAATATCCATTTCGCCTGAAAAAATTGATGATCAATAAATAATTTTTTGAATCACATCTTATTTACAATAAAAGAAAGAAAAATAACTTAATCACTTAAAGCAGACATTTACGAGTTATTATTTAGTGTGGTCAAGTACATACAATTATTTAGTGTAGTTAAGTACATACAATTATTTGTTGCTAAGTTTTATTTAATAACATTTTTTCCACCCCATTCCAACATGATATTACTAGCACTATTCTTAATTATCTATTTGACTTAAATTTTCAATCTATAATATTTTAGCGAGCCTCACTTATTTCTTACTTGAATCTTAATTACACGAAGTATAAAAAGAAATTTAGTTTTACAAATAAAATAAAATAATAATAAGTGCTTCATAAGAGTTTGTTACTGTATGATATTAATAAAAAAAAGTGAAATAACATTAAAGAAATAGAAGTAGTGATTCTACTATACCATCTTAATTGAAAAAATCGTGATCTTTCTACGATAACACTTGCATTAAATAATTGGGTGACAATAGTTTCGTATATTATGTTAATGTTTTCCACAAAAATAGGAGGAGAAATTTACGTAAATGGTGGGAAAATGGATTACTGTGAATGAAGTAATTTGTACGATCTATAATATTATTTTAAATTGTGATGATACCTATTATCGTGTAAAATGTGAACATAAATTGTGTGATAGATTGTCTGAAAATTCATTGCCTCCAAATCAGATAGTAATATGAGTAAACAACACTTTTAATTAAACAATAAATAAAATAGTGTTGGTACCATACTATCTAGAAAATAATAAGATGAGCAGATTTAAAAAATAGAATCGAATTTGATTTAATAAAGCAGCAGTAGGTTACACTAAAACCAGTACTCACTTGCATATAAGCCTGCTGTGAGTACAGAAAACACATGTACTCGTAAGTTCACATTTTCTATTGGTTTTCCTCAAAAAGCCGAATAATTATCTAGATCTTATTGTGGAAGAAATAAAATTTCCTACAAACGATATTCCAATCCAATCTCATTCATTTCTTTTGAAAAACATGAACTTGTATCATGACATAAATATCCATTCGAAAATATAGCATAACATGTGATTTCTACCAATCATAAAAAAGGAAACTCTTATGTCCGCAGAAATATGATATATGGATTTATTGATTCTAGCAATTTTTAAATAGATAAAAATTTTTAAATACAACGACGGAGCCAGAATTTGGTTCGAAAAAAGGAACACAATTAAAAAAAAGCAAGGAATCGCGCCAGGTAGGGGTCGAACCTACGACTTTCTGCTTAGGAAACAGACGCTCTATCCACTGAGCTACAGGCGCTTTACATTTTTCATCTTTTTCTTTTTTAACAAATAAGATAAAAAAAGTTAATTCCACAAAAGACAGTCGAGGCCCACTGCCGCACCAGTGGCCACCACCAGCAGCTCAGCACGACAACTTTCCGTCTCCATTTTTGACTGACTGATATCTGCAAATCTAGCAAACCCACCAGGAATTTCTCTGATTCTTTAAGATTTTCAGCGCTTATTCACCAACCCAAAGATCAACAACAAAATCTCATCCCGCAACTACGCTTTTTTCACAGGTTTCAATTCCACTCTTCTTCCGTTTTGCTTTTTAAGAAATTTACTAGACTGAGTAACTAAAAAGACCATTTCTTTTGCTTTTTTTCGCATACCCATTTTGTCGGTTATTTATAGGATGTCTAAAATAAAATTGATCTGAGAATACAGCAGAATTGTTTCATACTTCATAGAGTCGACCTGAACTGATTTAATTGAGACAATTATTAACTTCTGTCAATAGCTGAAGAGTAAAAAGTTTTGATTTTGCACTTATTTTGAGCTTCTTCTGCAGGTGGGGGGATGTGTTTTTTTTTTCTGTATTGGAGGTCCAGAGGGTTGAAATCTGTGCTTTGACGAAAACCCATTTGCTTGTAAATGCAACTTTGTAGATCAATTGCCTCTTGGATATACCGCATATTGGCTTGCATGGGGTGAGTAACTCGATTCTTCCTTTATATGTGTTTCCCAACTAAAATTTAACTGGATAAAACACTCCGGGGGGGGGGTTGTGTTTTTGTGTAGTATTGGTCTGAGATAAGCTTAAATGGAGCAAAGTTCAGCCCCATCTTTGAGTTTGGTATTGATTGAAATTGTTGTTGTTGTATTTTTGTTCCTGAGCGAGGCAGGGGTGGATGTAGTATTATAATACATGTGGTTGTACTCGTAACCACTGCCCTCGACTTGAACCATATATGTGTGTTTGTGTGGAAGTGTATGTATATACTATATATTATGCTATGATTGTAACCATAGTGATAAGGTGGTGGTCGGTGTAATTTGTTCTCATTGAACTAAATTTCTAGATCCGCCTCTAGGCGCAAGTGATTTTTATTTTTGGGAAAGAAAAAGCGGAAGTTTTGTTATTATTGAAAGTAAAAGAATATGAGACTAGGAGTGAAGAGTTGCAATTAAATTTAGTACGAATTCTTTAGAATGCTCTTCTTAGTTTATTGGGAAAGCTATGTGGTTTCAGCAGTTTTTTTGGGTGATTTGGAATCTGGGTACTTGCTTGCAGGCTAAGCAAAGTAATAATGGTGCATAAAGCAGGAATTAGCTGGTTCCTTTATCTGTTTCCTTTATTTTCATACTTTGCATGATATGTTAAGGTATTTCTTGCTTTGAATGCCACATTCCTCATGTACCTTTATTGGTTAGCTACGTTTGAAAAGAGTTCTCTTGCTCAGCTGCAGTGTGAAAAGTTTTTCATCTAGCCATGTGTATTAGGGGTTGTTTATGGATTGAAATGAATCCGTCTTTTGAAAGGAAGTCTTTTTGTTCAGTTTTGGTGTATTTTGGAAAATATCTTCGAGCCCTTATTGAGGTGATGATGGAAAAGTTGAAGGAAAAATGCAGATCCCTTTGTAATGTAAGAGGTTATTTTTGTCCTGTCTTATAATTTAGTGGAGAATAGATTGAGGATCTATTTTCTAGATCTGGATAAATTTGAGGATTCCAATTTGTTTTTAGCTTTAAGATGCTCAAGCTACTCTGACTTTTCTGGGGCTAACATAGATTAGGTTGCCAATGGCCCTATAGAAATTTTTATATAAACAGGTCGCTCTGACCTGTCAAAATACTGTTAATGGTATTATGCTGCTAATCCGTTAACAGCATCTCAAGTTCAATCTGATTACGTAACAGGTCCATTAATACTGGTTTCTTGATAAGAACTTATCTGATTGCAGTCCATAACTGGATTAAACTTATTAATTCACTCGAAGCCATTGATTTGGTGGCTACATCTTTTTTTCCTTTTCTTGTGAAGGTAACTCATTGGGATGATCATCTCAAAGTCATTTGGATATTGAGATTCATAATGATGGGGATTGGAGAAAGGAAGTGTTTTTCTAATGATTCTCTTGAAGTCTTACCTTTTAATTTAACAGAAGAAGCTGTAGCGAACACTGGTTTAAAATCCATTTAGGTAATAGTTGGAACCACAATGAGACATGTTTTAGGGGATGAACTAATCCACTTACTTATTGATAAGCACTTAAGAACATATTATCCAAACTATCATTACCATCTAGGTAACGTTTCCGTGAAAGCCACTAAAGATTATTTAAAACATGAACTAGTTAACATCAAAAGTGGGTTAGAATACTTTCAGAGATGATATAACCTATAAAAACAACTTTTTACTCCTCTTTGAAGATGTCCTTTATAAAGGATCAATTGTGAATCTTTATTAGCTGATAATTAGTGAAGGAATTAGAACATTTTAAGAGCCCTAAAGAATAAAAGTTAGAAAGTGAAAATATGGAAATTGGGTCAAAATAGAAAATTGTGTTAACATTCTCTATCTGCCCACTTCGTTCCTATCGTCTTTCTTGTCCTGTTGTACTTAACATCAAAAAGTTCTTCACTTTTATGATATCATTCATGCTAAATGACTTACTGAATGCATAGCTATCTTCAAAGTTACCAAGTTCGAAAAAAAATTGCATAACAATCAAGTTTTTTCTAAAAAAAATGAGTGAGTAAATGCTGTGGACCTTAATTTGCTAGCTGAATAACTGGACAGAGGTCCAGGCTTTTGATTGAGCTTAAAGTCAAATTGTCCATAAAGATCTATTCAATTTAGTCTGAGGCCCGTCTTGATCATTTTACGCATCAATATAGGCTCACATTATTATGGGGTAGCCACTTTATGGGGCTCTCAGGTCTTTCTTTCAACAATTTTGCACTCCCCTACAACACAATGTTTGCAGTTCCGCTAAATTCATGATTTATTCTATTAAAACTATATAAGAATAATTTTGTTTTCACATCAGATACAGCGCTAGACCAGCAAAAGAGACCATCATAATTTCTATAGGCCTAAAGGAGATCAAGTTCTGTACTTTGTGGTGTTCTGACTTATTTAATTCAATCGATTTAATTCTGACTTGGTGTGCATCAAGCTTAAAGATAGTAAAGGGTGTTGTGCTGAATTCTAATTTGCTATGAAATCAATACCTAGAATTCAAAACTTGTTAATGAAAATGTGGGGATTTTATAACGAGTACCAATAAAGAGTACCATGAAAGTACAAAAGAAGAGTACACCAGAACAAGTGTTTTCCTTCTAGATGTTGAAAGAATACAATAGATTTAACAGTGTAGCTTTATCAGATACAACATTTTCCCTACACTGCTACACCACAAAGATAAATTCTTCAAACATCTAGATTTTACATAAGAGATGCTCCTTTTTACCCGAAAAACATCTATTGTTTCTCTCTAGCCAGATATTCTCAGAAAATGCAACTGGTACTGCATTACAGTAGAGACTACTTCCTATATTTGATGTCTGCTTGTGGCTACTGTTTAAGGCCTGTTTGGCATGATTATTTGAATCCCAAAAATTTCAGGAAACACAGATCATGAACTGTCTGGAGAAATTACAATGGAGAACTAGGCTGTAGGCGATGAACTGATTCACAAGTTTCTTCATGTAGTAAGCATCAACTGCTTATAATAAAACCCAAGTAAAGCAAGCATCATGGACTGTCATGAGTAACACAAACCAAGGATAGAGATCCAAGTAAAGCAGGCAACTCTAGTTTTCAGATTATATCTTCCATGGCCAGTTTTCCGGATTTCCTACCATTTTTAACGTTTAACTTTATAACATACCTACCCAAAATTCTGCATCTCTCCATAGGTAAGAATCAGCCAGCTGCTCATCAATCTTGACAGATTCTAGCTTTTGAATTATTTAATTAATATATTTCAGAAGCTATTAACTACTAACTAAGAAAATGGTTAGTTATCAGTTTTGCTTAGCTCCTTTGACTTTTGCGCCTGTATTTTAAAGTTCTCAATGTTTATGATTATTTGTGGAAGCATGGATTCCAGGATTTAAATATGTGATTGTCATTACTGATTGTTGACTTCGATTGTGGTTCCTAATGGTTTCTTAATGGTCATTTGTAGCTTATATTTCTTTACTTCTCAAATTTGGGTACACCTAATAAGAAAAAAGCCTATTAGATTGTCCATGGATCTGTAGCTTAATTGCACCTAGAATGTTGAATTTTGTTGGGGTAGCTTATTGTAACTTTTGCTCCGCTAATCAATTTCAATGGTTATAAACCTGGTTGCAACAGAGCAGAAGTTGTCTTGGATGCTGTGTGAATTCTCCTCATGTTGTTTCAGTGGATAAGCCATCTAAAGGACTGAAAGTTCCGAGCAAACGATTGAGGAAAACTAGTTTAAGAGACGACTTTTGGAGCAGTAGTGCATGCGAGATGGAGAATAGCACATTTCCCTCCCAGAGAAGCATCTCATCAATTAGCACATCTAATCCGGCCCTTGATCCTCACAGTAATTCTGGCACCACGAGCAGCACTTCGGAATTTGTAAATCATGGCAAGTGCATACTTTCGTCTCCTTTTATTTTGATGTAAATCATCCCAATTGTTTACTAGTAGCAAGTAAACCTGCATGGGGATCAGCAACGTCTTAGTATTTGTACACAAATACAGAGACATGATTCATGATGACGAATGGGTAAGATAGATAAACCTTTCCTGGGAACACTACCAAAAATGGTTAAATAATTATCTGATAGTTTCTCAACTTCAATTACTTGCTTTCTAGGGTCACTCTTGAACTTTGGTCCATCTAAAGGGCCCCGAACTGTCTCATTTTTTGGTCATGCCACTGCCTCATTTGGATGTGGCCAAAAAAGGGCCCTTGTATTAGGATTTTATTGCAAATGTTCCCATTTCATCGAATTTTTACAAAGGGTCGACCCAAAATTTCATAAACACTTGGGATTTCTGTTTTTTTTCAAAGGGGGTGGGTATCTTGATTAACTTTCATTTTTCTATGAATGGCATGGCTTATGGGCTTTGCAGAAATCCCATGCACAATTTGAGGCATAGAATAGAGAGACCATATACAAACTTGAAAGCATGATCTTGTGGCGTTCTTTTCATTTTAGCTCAGTTTTAAACTCCTTTCTGTATTTTCTTTGTCGTATCATTGAATTAAACATTACCTGGAACAGGTCTACTTCTTTGGAATCAAACGAGGCAACAATGGTGTGGAAATAAAACACCACAGAAGGGTGCCTCAGTTCGAGAACCCAAATTAAGGTAAGTTTCTCACATTTTTGGAGGTGTAAGCATGAATAGTTCTTTGAGTAAAGGGAAAAATTAACTGATGGTAGAAAGACAAGGGAAAAGGCGTGCAGGCCATAGTTTTGATACCGTGTCTTTTGACTTGGGGTGATTTTTGCTGTTAACTGTTTTCAACTATCGCGCATTATGCTGGATTACATACATGTGTGACAAGTTCATTCTGCCATCATAAATTGCAGTTCGGATACAAATTATGTAACGTTGCTAGGGACTAATAAGCTTTTCCCTCAGCCAATCCCTCTACCGGTAAGTTATCGAATTAGCTAAGATAGTTTTTCTTTCCATATTACATGTAGCTAGTTGCTAACTGTTGTGCATTTTATATATCAGGAAATGGTAGACTTTCTTGTTGATGTGTGGGAGCAGGAGGGGCTTTATGATTAAGCAGCCACATAACTCATCATTCTCAGCAACTGCAAATTGTGTTTCTGCAAGTTTTTATCACATTAATTGGATGTTTTATAAGGACTTCTAAAATATTAAAATAAAAAATGATATCCAAAAGTTAAATGAAGATATTTTAATTTTT</genome_strand>
        <mrna_strand>TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGAGAGAATATTTTTCAGCCTATATATATATAATATAACAGTGATAC-ACCTCAACCAT-TGAG..............................................................................................................................................................................................................................................AA-GG--GG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-TGAT-ATTT-TACAAAAAGA-AG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCAGAAG.........................................................................................................................................................................................................................................GG--ATAGGA-AAGA-TACAAGAA...............................................................................................................................................................................................................................................................................................................................................................................................................TTTTTAAGTAACCTCG-CAAGCTCA-AGGGTTATACAAAGT-GTTACGGACTTGCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGTCAAGAAAACT--CGAGCCCACCAGGAATTTCTCTGATTCTTTAAGATTTTCAGCGCTTATTCACCAACCCAAAGATCAACAACAAAATCTCATCCCGCAACTACGCTTTTTTCACAG................................................................................................................................................................................................................................................................................GTGGGGGGATGTGTTTTTTTTTTCTGTATTGGAGGTCCAGAGGGTTGAAATCTGTGCTTTGACGAAAACCCATTTGCTTGTAAATGCAACTTTGTAGATCAATTGCCTCTTGGATATACCGCATATTGGCTTGCATGGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTTGTCTTGGATGCTGTGTGAATTCTCCTCATGTTGATTCAGTGGATAAGCCATCTAAAGGACTGAAAGTTCCTAGCAAACGATTGAGGAAAACTAGTTTAAGAGACGACTTTTGGAGCACTAGTGCATGCGAGATGGAGAATAGCACATTTCCCTCCCAGAGAAGCATCTCATCAATTAGCACATCTAATCCGGCCCTTGATCCTCACAGTAATTCTGGCACCACGAGCAGCACTTCGGAATTTGTAAATCATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTACTTCTTTGGAATCAAACGAGGCAACAATGGTGTGGAAATAAAACACCACAGAAGGGTGCCTCAGTTCGAGAACCCAAATTAAG................................................................................................................................................................................................................................TTCGGATACAAATTATGTAACGTTGCTAGGGACTAATAAGCTTTTCCCTCAGCCAATCCCTCTACCG....................................................................................GAAATGGTAGACTTTCTTGTTGATGTGTGGGAGCAGGAGGGGCTTTATGATTAAGCAGCCACATAACTCATCATTCTCAGCAACTGCAAATTGTGTTTCTGCAAGTTTTTATCACATTAATTGGATGTTTTATAAGGACTTCTAAAATATTAAAATAAAAAATGATATCCAAAAGTTAAATGAAGATATTTTAATTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0135H21-7s2vm/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U321118" ref_strand="+" ref_description="SGN-U321118        Tomato 200607 #1 [8 ESTs aligned] arabidopsis/peptide: | Symbol: None | expressed protein | chr4:15608918-15612291 FORWARD | Aliases: F8B4.30(evalue: 1e-53, score=207) genbank/nr: gi|42573125|ref|NP_974659.1| expressed protein [Arabidopsis thaliana] (evalue: 8e-52, score=207)">
      <seq>ttgatgcaaagggtaaatcattcagagacaagaaaactgttgagtattattcaaaacctgcattggctcatctaaatgttgatcgtgctaagcaacctggtcatgctgaagtagcagcatcagcttctcccagtgctgctcagtcggaaggccttaaggaaaaaacaaaactgatgcctttgaagaaagtgccccctgctaaagctgatggaagtgcagaatcatcttccagtcctactgctgcatcagatgccaaacctcgcaaagtaggtactcttccaacctacaatatcagtttcaagtgtgatgcaagagctgagaaaaggaaagagttttactccaagcttgaagaaaaaacccaggcaaaggaagttgagaagagtaatatgcaagccaagactaaggaaactcaggaagctgagatcaaaatgttaaggaagagcttaaaatttaaagcgacacccatgccaagcttttatcaggaacctgcacctccaaagatggagttgaagaagattccaccaaccagagctaaatcccccaaacttgggaggagaaagagctcgcccaccaaagaaagaatcaatgagagtgtcatgcgcccgggtaggttaagcttggacgaaaatgcatcccaaaataacccagtcaaagggcattctcctctcattgttaagaagcctcaaaggaagtcacttccaaagctgccatctgagaaaaccaacttatccaatgaaacaagaaagctttccattcgcaagtctagctcatccaaagaatcagctgaagctgcatctctgccgaatgctttacccaaggaaacaagtgaagtttcttctcaaccaaataaccaacacaagcaagctactgaatttgatgcagatggtcgagagtgtgaggttgtatcagttgttgaaccgagccagactgagaccggtgttaaagctcaaatagagaccaatctggtgcaggaacatgtcacaatcgagcagtagaagcaaccactgaagttgaatatatactcatggagcaatcttcatttgctctttgcctcaagtattgcaaaggtatgaatgcacttgatattgtactaggcaaacatcgccattttgtctatagtcagcgcagcaaggttgaatttgtagtggtctatcttctttcaagattgctgagtgtggtcatcagaaacatgcaggctgcttgcctctgttatctaaatgttgagtagccagaaatccttaagaatttttgtcttttctactagtcgagtactttgcagttgcagaaaacttgagacagtactggctgctgaaactgttctgttgaaccaaatggttgttgcttgtttattaaggtgtatttataaattacatatacattacatgatggagagctttgttcaggtaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0135H21-7s2vm/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06SLm0135H21.1" temp_strand="-" temp_description="C06SLm0135H21.1  AC216666.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0135H21 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="91421" stop="86125"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="91121" g_stop="91030" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="92" r_length="92" r_score="0.989"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="91029" i_stop="90900" i_length="130">
            <donor d_prob="0.939" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="90899" g_stop="90835" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="93" r_stop="157" r_length="65" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="90834" i_stop="90692" i_length="143">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="90691" g_stop="90620" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="158" r_stop="229" r_length="72" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="90619" i_stop="90520" i_length="100">
            <donor d_prob="0.960" d_score="1.00"/>
            <acceptor a_prob="0.797" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="90519" g_stop="90417" g_length="103"/>
          <reference_exon_boundary r_type="cDNA" r_start="230" r_stop="332" r_length="103" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="90416" i_stop="90321" i_length="96">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="90320" g_stop="90249" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="333" r_stop="404" r_length="72" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="90248" i_stop="90146" i_length="103">
            <donor d_prob="0.972" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="90145" g_stop="90035" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="405" r_stop="515" r_length="111" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="90034" i_stop="87323" i_length="2712">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.969" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="87322" g_stop="86435" g_length="888"/>
          <reference_exon_boundary r_type="cDNA" r_start="516" r_stop="1403" r_length="888" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="1406" polyA_stop="1430"/>
      <MATCH_line gen_id="C06SLm0135H21.1" gen_strand="-" ref_id="SGN-U321118" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>1403</cumulative_length_of_scored_exons>
        <coverage percentage="0.981" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0135H21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U321118" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="91121" e_stop="91030"/>
          <exon e_start="90899" e_stop="90835"/>
          <exon e_start="90691" e_stop="90620"/>
          <exon e_start="90519" e_stop="90417"/>
          <exon e_start="90320" e_stop="90249"/>
          <exon e_start="90145" e_stop="90035"/>
          <exon e_start="87322" e_stop="86435"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGATGCAAAGGGTAAATCATTCAGTGACAAGAAAACTGTTGAGTATTATTCAAAACCTGCATTGGCTCATCTAAATGTTGATCGTGCTAAGGTAAATGTCTTAGGTCTAATTTATGACCTGCAGTCCAGAGTAACAGCAATCTGAATTTCAATATTGCAGCTTCATATGCATCTGTTTATTGTCATCAATATCATATTCCTTTTCTGCTGTCTTCTAGCAGCAACCTGGTCATGCTGAAGTAGCAGCATCAGCTTCTCCCAGTGCTGCTCAGTCGGAAGGCCTTAAGTATGTCCGATTTCTATTGTTGTTTCTTACCTATTACTTGGACGAGTCCTATGATAATTGTACTGAGAATGCTTTCAAAACGTGCCAACAATCAATGATAACTTTTCCCCAGTGGTTTGTGAAATATAATTTTGTTATTGCAGGGAAAAAACAAAACTGATGCCTTTGAAGAAAGTGCCCCCTGCTAAAGCTGATGGAAGTGCAGAATCATCTTCGTATCCTAATAAATCTTTCTTTTTTCTTTCACTCCTTAGATTTGAAGTCTTATTTTTAGCATAATAAAAGTCTTTCAGTTTATCCTTGATCACTTCATAGCAGTCCTACTGCTGCATCAGATGCCAAACCTCGCAAAGTAGGTACTCTTCCAACCTACAATATCAGTTTCAAGTGTGATGCAAGAGCTGAGAAAAGGAAAGAGGTTAGCCCTCTGCTTGCATCACTGAAGCTTATAATATATGCTTGACAGTCTTGCACCATGAAGTCAATAAGAACATTTGTCTTGTTATTTGGACAGTTTTACTCCAAGCTTGAAGAAAAAACCCAGGCAAAGGAAGTTGAGAAGAGTAATATGCAAGCCAAGACTAAGGTGTTGTGACACTTCTGCTTCTGGATATCTTGGTGTAGAAAATTTCTTGTTGTAGGGTTATCTTGTAGCATTCCCATTTTATTTTCTTTCATTTCTCTAACAGGAAACTCAGGAAGCTGAGATCAAAATGTTAAGGAAGAGCTTAAAATTTAAAGCGACACCCATGCCAAGCTTTTATCAGGAACCTGCACCTCCAAAGATGGAGTTGAAGAAGGTAATTTTATGCTGTGTTGTATGTTATGATGCCGAAACATACAATCTTGTATGGCATGAAGTGCCTTTTGCTGTTCTTAGACATAGTGTGTTGAATATTTAGTGGTTCTTTGGCTCAAAATGATTTTGTTACCAGAATGATAAATATCATTTGCTTTATCCTGCAAAAAATTAATATATTTAGTGTCAGATGTGGAGCACTGTTTAATTTTTTTGTTTTTGTTTTTTGAAGCTCTAGTAAAATATAGTGAAGGAGTTAGGTTAAAGTTCATCCTTTACCTGATCTTTTGAATGCTTTCAACTTGACACTGAAACTGCATATTCTGTCTATATGTGATGAACTATGAAGAAAGGAATTGCAGTTCTACTGAGCTCTGAAAAGAAACCTTTAGCTGACAATTGTTAAACTGAATATAGCTAGAGTTGGGCGGTTCATTGTCTTGACTTTTAAACCACTATTGGTGCATCTCCCTTGATATATTTATGTGAAATTGCAGTACTACTGAGCTCCTAAAAAAGCGATAGATCAATGTTAAACTGGATATAGATTTGTAGAGTTGGGTGTTTATTTTCTTGATTTTTTTTACCACAAATGGAGTATTGCAATTGATACATTTATTTGAAGATTGACTTTATTGTTAGCTAGTGGAATTTCATCATCATTTCTTGTGATATTTTAAGTGCTTAGCATGATCGGGAAGAAGTGCATAATAAATTTGTCTCTCGGTGAAGTTCCAGTATTATATGTGAAGCTCTACTTTTTGATGCATAATTGGTGTGGCTAATCTTTGACGGAAAAGTCAACAAGAATAAAATCTGAAGATACAGTACCAGAATTGATAGAATAGGTCATAGGTGTGAGATATGATTTTGGTGCTTAAGTAACAATAGAAAAGGATATGAGTCTGGTGTAGAAATTCATGATACTGGAAATCAGGTCAAGCCTTTTCATTTTTCCTGGATGAGTATCAGACAAGGTCAACTTCATTACCTGTTCACTTTAAAAGGTACACTATATGCAAGTTAAATTGTGGAAAAGTTAAGTCTTGGAATCATTCCTCTCTCGTTAGTGTGCCATCTCAACATTGTAAAATTGTTATGGCTCTTATTTGTTAGTGAAATTGTTGGATGGTTGGACCTGATAGATCTTTAGCACTGAAGGGCTGACCTTTTGCTGACACAAATGGAACTATTGTTTTAAGTGCTAGTTTGCAGACGGTTGGGACACAGGCTACTAAGTTTTGGTTTTGTAAGAGGGATGATGTTCATATTTGAAGTGCTACTTTGCTGACTTAGCTGGGCCAAAGGCTGCTAATATGATGTGCGTGGGACCATGTATACACTTAATAGACGATGCATGAAAGAGTAGGTGTAAAGTTGTAAATTCTAGCGGTAGTGTCTAAAGGTACACAATTGCACCTACACGCACACTCAATGATGCTTAGGATCCATGAATCTCGGGCATCTCTTTCCTTTATTTTCTTACATCGATGCCCTTCATGGATGAGACCTTCACAAACACTCGCCGTACTAAGCATGAAGTCAAACTCTCTAATTCTTTTGTCAGTGTATGACTTTTACCCGTTTTGATCTGTTCTTAGTCCTTTCCTAATGAACTGAACCTATTTCAAGGATTTATGTACCTAATTTGGTCCCAAGAGCCTTCTCTCCCTTGGCCCAAACCAGCAGTGAGAGGTTTACGACACATCCTGTACAGAGCCTCATAAGGTGCTATCTAAATACTGGATTAGTGACTCTTATTGTTAGCAAATTCAACGAGATGCAAAGTGGTTAAGCACGATAGAAATGTGAAGAGTACACATGTGGTTCTTGACAGTTCATCATAGGCTAGATATATTCCCGATTCAGTAAATCTAAGACTTGGTAAAATTTCTCTTAGCTTTGGATCATTACTTATTATTTCTTGATAGCACTCTCTTTTGTGCTATAAACACTACATGACGTCCTTAATCACCATAACAACCATAAATTAGAGTTCCTCCATCTACTCTAATTAAGATCAGGAAATATTCTAAGGGTCAAGCAGGCAAATTATGGTCAAAGCTAGCTTTTATTAGTAGGTAGTATGAGAAGATTTAGGAGCTCCCTTCAGGCACTTCACTATTCAGTTGGCAAAGAAATGGAGTTGCGAAACTAGATAGTATGCGGAAGTACTTCTATCTGGTGTCGATCTCTCCAAAGTGTTGAGCAAAAATTATCTGCTCTGAAGGTAAATTCTGGTGTATATGTTTACATCTGCCCCTATTTATCATGTGTATTATATTTTGTATCTATAACATATCTAAAATGAAGAAGAGTCTTGGTATACCTAGTAAAGCTTCTGCCACGTGATCTCTAGGTCACGGGTTTGAGCTGTGGAAACAATCTCTTGTAGAAATGCCGGGTAAGTCTGTGAAGGTCTGGACCCCCGCATAGTGGGAGCTTGGTGTGCCAGGCTGCCCTATACATTAAAATATATCTATCATAACCTAAATTTGATGCCTTACCTTTGCTGGTCATGCTAGGATGGTGGTATGTCATGTTCTTGTGAGTTTTATCTAAATAAATTTTCTAATATTTGCTTTCTTACTTACTATTTTTGTATATGTACAGCTGAAGCCCCTCCTAACGTAGTTTATTCTTCCTGTTTATTTTGAAATTTACTAGTTGCGGTGTTTAATTAACACCTTCTGTCACTATCTTATGATGTTAGATTCCACCAACCAGAGCTAAATCCCCCAAACTTGGGAGGAGAAAGAGCTCGCCCACCAAAGAAAGAATCAATGAGAGTGTCATGCGCCCGGGTAGGTTAAGCTTGGACGAAAATGCATCCCAAAATAACCCAGTCAAAGGGCATTCTCCTCTCATTGTTAAGAAGCCTCAAAGGAAGTCACTTCCAAAGCTGCCATCTGAGAAAACCAACTTATCCAATGAAACAAGAAAGCTTTCCATTCGCAAGTCTAGCTCATCCAAAGAATCAGCTGAAGCTGCATCTCTGCCGAATGCTTTACCCAAGGAAACAAGTGAAGTTTCTTCTCAACCAAATAACCAACACAAGCAAGCTACTGAATTTGATGCAGATGGTCGAGAGTGTGAGGTTGTATCAGTTGTTGAACCGAGCCAGACTGAGACCGGTGTTAAAGCTCAAATAGAGACCAATCTGGTGCAGGAACATGTCACAATCGAGCAGTAGAAGCAACCACTGAAGTTGAATATATACTCATGGAGCAATCTTCATTTGCTCTTTGCCTCAAGTATTGCAAAGGTATGAATGCACTTGATATTGTACTAGGCAAACATCGCCATTTTGTCTATAGTCAGCGCAGCAAGGTTGAATTTGTAGTGGTCTATCTTCTTTCAAGATTGCTGAGTGTGGTCATCAGAAACATGCAGGCTGCTTGCCTCTGTTATCTAAATGTTGAGTAGCCAGAAATCCTTAAGAATTTTTGTCTTTTCTACTAGTCGAGTACTTTGCAGTTGCAGAAAACTTGAGACAGTACTGGCTGCTGAAACTGTTCTGTTGAACCAAATGGTTGTTGCTTGTTTATTAAGGTGTATTTATAAATTACATATACATTACATGATGGAGAGCTTTGTTCAG</genome_strand>
        <mrna_strand>TTGATGCAAAGGGTAAATCATTCAGAGACAAGAAAACTGTTGAGTATTATTCAAAACCTGCATTGGCTCATCTAAATGTTGATCGTGCTAAG..................................................................................................................................CAACCTGGTCATGCTGAAGTAGCAGCATCAGCTTCTCCCAGTGCTGCTCAGTCGGAAGGCCTTAA...............................................................................................................................................GGAAAAAACAAAACTGATGCCTTTGAAGAAAGTGCCCCCTGCTAAAGCTGATGGAAGTGCAGAATCATCTTC....................................................................................................CAGTCCTACTGCTGCATCAGATGCCAAACCTCGCAAAGTAGGTACTCTTCCAACCTACAATATCAGTTTCAAGTGTGATGCAAGAGCTGAGAAAAGGAAAGAG................................................................................................TTTTACTCCAAGCTTGAAGAAAAAACCCAGGCAAAGGAAGTTGAGAAGAGTAATATGCAAGCCAAGACTAAG.......................................................................................................GAAACTCAGGAAGCTGAGATCAAAATGTTAAGGAAGAGCTTAAAATTTAAAGCGACACCCATGCCAAGCTTTTATCAGGAACCTGCACCTCCAAAGATGGAGTTGAAGAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCCACCAACCAGAGCTAAATCCCCCAAACTTGGGAGGAGAAAGAGCTCGCCCACCAAAGAAAGAATCAATGAGAGTGTCATGCGCCCGGGTAGGTTAAGCTTGGACGAAAATGCATCCCAAAATAACCCAGTCAAAGGGCATTCTCCTCTCATTGTTAAGAAGCCTCAAAGGAAGTCACTTCCAAAGCTGCCATCTGAGAAAACCAACTTATCCAATGAAACAAGAAAGCTTTCCATTCGCAAGTCTAGCTCATCCAAAGAATCAGCTGAAGCTGCATCTCTGCCGAATGCTTTACCCAAGGAAACAAGTGAAGTTTCTTCTCAACCAAATAACCAACACAAGCAAGCTACTGAATTTGATGCAGATGGTCGAGAGTGTGAGGTTGTATCAGTTGTTGAACCGAGCCAGACTGAGACCGGTGTTAAAGCTCAAATAGAGACCAATCTGGTGCAGGAACATGTCACAATCGAGCAGTAGAAGCAACCACTGAAGTTGAATATATACTCATGGAGCAATCTTCATTTGCTCTTTGCCTCAAGTATTGCAAAGGTATGAATGCACTTGATATTGTACTAGGCAAACATCGCCATTTTGTCTATAGTCAGCGCAGCAAGGTTGAATTTGTAGTGGTCTATCTTCTTTCAAGATTGCTGAGTGTGGTCATCAGAAACATGCAGGCTGCTTGCCTCTGTTATCTAAATGTTGAGTAGCCAGAAATCCTTAAGAATTTTTGTCTTTTCTACTAGTCGAGTACTTTGCAGTTGCAGAAAACTTGAGACAGTACTGGCTGCTGAAACTGTTCTGTTGAACCAAATGGTTGTTGCTTGTTTATTAAGGTGTATTTATAAATTACATATACATTACATGATGGAGAGCTTTGTTCAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0135H21-7s2vm/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U321117" ref_strand="+" ref_description="SGN-U321117        Tomato 200607 #1 [2 ESTs aligned]">
      <seq>tcccttcaggcacttcactattcagttggcaaagaaatggagttgcgaaactagatagtatgcggaagtacttctatctggtgtcgatctctccaaagtgttgagcaaaaattatctgctctgaaggtaaattctggtgtatatgtttacatctgcccctatttatcatgtgtattatattttgtatctataacatatctaaaatgaagaagagtcttggtatacctagtaaagcttctgccacgtgatctctaggtcacgggtttgagctgtggaaacaatctcttgtagaaatgccgggtaagtctgtgaaggtctggacccccgcatagtgggagcttggtgtgccaggctgccctatacattaaaatatatctatcataacctaaatttgatgccttacctttgctggtcatgctaggatggtggtatgtcatgttcttgtgagttttatctaaataaattttctaatatttgctttcttacttactatttttgtatatgtacagctgaagcccctcctaacgtagtttattcttcctgtttattttgaaatttactagttgcggtgtttaattaacaccttctgtcactatcttatgatgttagattccaccaaccagagctaaatcccccaaacttgggaggagaaagagctcgcccaccaaagaaagaatcaatgagagtgtcatgcgcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0135H21-7s2vm/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06SLm0135H21.1" temp_strand="-" temp_description="C06SLm0135H21.1  AC216666.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0135H21 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="88231" stop="86935"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="87931" g_stop="87235" g_length="697"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="697" r_length="697" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0135H21.1" gen_strand="-" ref_id="SGN-U321117" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>697</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0135H21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U321117" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="87931" e_stop="87235"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCCTTCAGGCACTTCACTATTCAGTTGGCAAAGAAATGGAGTTGCGAAACTAGATAGTATGCGGAAGTACTTCTATCTGGTGTCGATCTCTCCAAAGTGTTGAGCAAAAATTATCTGCTCTGAAGGTAAATTCTGGTGTATATGTTTACATCTGCCCCTATTTATCATGTGTATTATATTTTGTATCTATAACATATCTAAAATGAAGAAGAGTCTTGGTATACCTAGTAAAGCTTCTGCCACGTGATCTCTAGGTCACGGGTTTGAGCTGTGGAAACAATCTCTTGTAGAAATGCCGGGTAAGTCTGTGAAGGTCTGGACCCCCGCATAGTGGGAGCTTGGTGTGCCAGGCTGCCCTATACATTAAAATATATCTATCATAACCTAAATTTGATGCCTTACCTTTGCTGGTCATGCTAGGATGGTGGTATGTCATGTTCTTGTGAGTTTTATCTAAATAAATTTTCTAATATTTGCTTTCTTACTTACTATTTTTGTATATGTACAGCTGAAGCCCCTCCTAACGTAGTTTATTCTTCCTGTTTATTTTGAAATTTACTAGTTGCGGTGTTTAATTAACACCTTCTGTCACTATCTTATGATGTTAGATTCCACCAACCAGAGCTAAATCCCCCAAACTTGGGAGGAGAAAGAGCTCGCCCACCAAAGAAAGAATCAATGAGAGTGTCATGCGCC</genome_strand>
        <mrna_strand>TCCCTTCAGGCACTTCACTATTCAGTTGGCAAAGAAATGGAGTTGCGAAACTAGATAGTATGCGGAAGTACTTCTATCTGGTGTCGATCTCTCCAAAGTGTTGAGCAAAAATTATCTGCTCTGAAGGTAAATTCTGGTGTATATGTTTACATCTGCCCCTATTTATCATGTGTATTATATTTTGTATCTATAACATATCTAAAATGAAGAAGAGTCTTGGTATACCTAGTAAAGCTTCTGCCACGTGATCTCTAGGTCACGGGTTTGAGCTGTGGAAACAATCTCTTGTAGAAATGCCGGGTAAGTCTGTGAAGGTCTGGACCCCCGCATAGTGGGAGCTTGGTGTGCCAGGCTGCCCTATACATTAAAATATATCTATCATAACCTAAATTTGATGCCTTACCTTTGCTGGTCATGCTAGGATGGTGGTATGTCATGTTCTTGTGAGTTTTATCTAAATAAATTTTCTAATATTTGCTTTCTTACTTACTATTTTTGTATATGTACAGCTGAAGCCCCTCCTAACGTAGTTTATTCTTCCTGTTTATTTTGAAATTTACTAGTTGCGGTGTTTAATTAACACCTTCTGTCACTATCTTATGATGTTAGATTCCACCAACCAGAGCTAAATCCCCCAAACTTGGGAGGAGAAAGAGCTCGCCCACCAAAGAAAGAATCAATGAGAGTGTCATGCGCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0135H21-7s2vm/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U323467" ref_strand="+" ref_description="SGN-U323467        Tomato 200607 #1 [4 ESTs aligned]">
      <seq>caaaactgtccccccccccctcttctctatttttgagttgagaattttgtgaaatagagaaaccccatcttcaaagttctcaacttttcactttcaagttcaagaaaacaccatctttagagcattttcataaattgtttctaagattttcaagattcttgtttgttttgtaagtgtttggctttctgtgtcaagattctatcagatcccttgtggatttcatgggcttgtgatctttttatggttgtttagaattgtgattgcaaaatttgaaacattatagagcatgatggatgttgtcaataacatagctgtttctggaaatgggttgggctttggaaatggagttcaccaacttccagaagttgttgctggcatatccaatgggatgcctcatgcaagtcccagtaatgaagaattagagaggagtttccagagcactgtcatattgacggatagtgaaacagttggatcttctgtccaagaggtcagtaatgaaactacaattactgtagaaagcaatgctggtgtcagttccgaggaacacgaagcaaaagaatctgatgatgcaaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0135H21-7s2vm/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06SLm0135H21.1" temp_strand="-" temp_description="C06SLm0135H21.1  AC216666.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0135H21 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="92930" stop="90970"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="92630" g_stop="92379" g_length="252"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="252" r_length="252" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="92378" i_stop="91670" i_length="709">
            <donor d_prob="0.875" d_score="1.00"/>
            <acceptor a_prob="0.925" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="91669" g_stop="91381" g_length="289"/>
          <reference_exon_boundary r_type="cDNA" r_start="253" r_stop="541" r_length="289" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="91380" i_stop="91303" i_length="78">
            <donor d_prob="0.745" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="91302" g_stop="91270" g_length="33"/>
          <reference_exon_boundary r_type="cDNA" r_start="542" r_stop="574" r_length="33" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0135H21.1" gen_strand="-" ref_id="SGN-U323467" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>574</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0135H21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U323467" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="92630" e_stop="92379"/>
          <exon e_start="91669" e_stop="91381"/>
          <exon e_start="91302" e_stop="91270"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAAACTGTCCCCCCCCCCCTCTTCTCTATTTTTGAGTTGAGAATTTTGTGAAATAGAGAAACCCCATCTTCAAAGTTCTCAACTTTTCACTTTCAAGTTCAAGAAAACACCATCTTTAGAGCATTTTCATAAATTGTTTCTAAGATTTTCAAGATTCTTGTTTGTTTTGTAAGTGTTTGGCTTTCTGTGTCAAGATTCTATCAGATCCCTTGTGGATTTCATGGGCTTGTGATCTTTTTATGGTTGTTTAGGTAAGTATATTGCATTTAGTAGCTAGCAACTGCATTTGTTGTGGTTTGTGTTTATAAAATGTTGGTACATTATGTGTGGTATTTAGCTTTGTAAAAATGGGTTTTTGCTGTTTTGGGGTTTTTGGATTTGCTGTGGTGAATCTTGGATTGAGAAAAAGATTGGATCTTTTTACTGGGGTTGGAGATCTAAGTAGAGTAAGTGTCGGTCTACTGATTTTGTCGTTTTCTGGTATTGTATTTGGATTTGGGTTTTTGAGTTCTTTGTTTGTGGTCATTTGCTGAGATTTTGCATAGATGAACTTGAATAGAGTGGAATGGATACCCAAGATCCACATCATAATTGGATTGGATTGTAATTAATGGAAAGGCTTGATTTTTAAGGTGATTTCACCTTGTTTCTCATTTCTGTAGAAATGGTATTGACTTGATGTAAAGCCCGAGTTTTGATTTGTGTGTTGTTAGTCTGTTTGAAGAACAAAGTGATTGGAGTATTAGATGAGAGTTTGTAGTGTTCTACAGTATGAATTTTTTGTAAGTTGAGCTTTTTATGGTTGTAGCATTGCTTTGGTAATCCTCTATATACAATTTGTTTTCTGCTGGATTGGTTGTTTTCTAGAGTATGAAACTCTATATTGTTTGATTATACTTTAAAACACCTGTTTTAATCATGACTCATGAGGGATTTACTGTTTGTGGTTTTGACATGTAGAATTGTGATTGCAAAATTTGAAACATTATAGAGCATGATGGATGTTGTCAATAACATAGCTGTTTCTGGAAATGGGTTGGGCTTTGGAAATGGAGTTCACCAACTTCCAGAAGTTGTTGCTGGCATATCCAATGGGATGCCTCATGCAAGTCCCAGTAATGAAGAATTAGAGAGGAGTTTCCAGAGCACTGTCATATTGACGGATAGTGAAACAGTTGGATCTTCTGTCCAAGAGGTCAGTAATGAAACTACAATTACTGTAGAAAGCAATGCTGGTGTCAGTTCCGAGGTGAGGGAGTTTATCCAGTTTTTACTTACTAAGGACATTTTGAACACCACATCTAGGTAATTGCTTATTTACTTGCAGGAACACGAAGCAAAAGAATCTGATGATGCAACA</genome_strand>
        <mrna_strand>CAAAACTGTCCCCCCCCCCCTCTTCTCTATTTTTGAGTTGAGAATTTTGTGAAATAGAGAAACCCCATCTTCAAAGTTCTCAACTTTTCACTTTCAAGTTCAAGAAAACACCATCTTTAGAGCATTTTCATAAATTGTTTCTAAGATTTTCAAGATTCTTGTTTGTTTTGTAAGTGTTTGGCTTTCTGTGTCAAGATTCTATCAGATCCCTTGTGGATTTCATGGGCTTGTGATCTTTTTATGGTTGTTTAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTGTGATTGCAAAATTTGAAACATTATAGAGCATGATGGATGTTGTCAATAACATAGCTGTTTCTGGAAATGGGTTGGGCTTTGGAAATGGAGTTCACCAACTTCCAGAAGTTGTTGCTGGCATATCCAATGGGATGCCTCATGCAAGTCCCAGTAATGAAGAATTAGAGAGGAGTTTCCAGAGCACTGTCATATTGACGGATAGTGAAACAGTTGGATCTTCTGTCCAAGAGGTCAGTAATGAAACTACAATTACTGTAGAAAGCAATGCTGGTGTCAGTTCCGAG..............................................................................GAACACGAAGCAAAAGAATCTGATGATGCAACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0135H21-7s2vm/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U343989" ref_strand="+" ref_description="SGN-U343989        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: | Symbol: None | auxin-responsive AUX/IAA family protein, contains Pfam profile: PF02309: AUX/IAA family | chr4:15583393-15584775 FORWARD | Aliases: F10M6.1(evalue: 9e-23, score=103) genbank/nr: gi|15809740|gb|AAL06798.1| AT4g32280/F10M6_80 [Arabidopsis thaliana] >gi|14190493|gb|AAK55727.1| AT4g32280/F10M6_80 [Arabidopsis thaliana] (evalue: 6e-21, score=103)">
      <seq>tggagaaaaaaactaattcatgggattaatcatgaagttggatggaacaaaaataataataacaataataataataatcatagacacaatattggaattagaaattccatgtatgtgaaggttaaaatggaaggagtagccattggaagaaaaattgatctaatgttatataattcttaccaaatccttactaacactttgctccaaatgtttaataaatcacatgagagttgtgatgaaaatgatggacgctttacactactgtaccaagacaaagaaggagattggatgcttgctggagatgtaccatgggaaacattcatggagacagttcagagaatacagattctaagtaattggaagagtggaggaagcacaagaaaatcatcccatattcctcaacagttttgattatattatatttagtttaattagtaaagaatgttgaaggtaattgattaaaagatatgaagaagaaaaaattagttaaatgagtttgacattgtaattttattatcctataatgtaattttatattaatttaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0135H21-7s2vm/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06SLm0135H21.1" temp_strand="-" temp_description="C06SLm0135H21.1  AC216666.1 htgs_phase:1 submitted_to_sgn_as:C06SLm0135H21 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="113911" stop="112130"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="113697" g_stop="113478" g_length="220"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="220" r_length="220" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="113477" i_stop="113327" i_length="151">
            <donor d_prob="0.907" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="113326" g_stop="113233" g_length="94"/>
          <reference_exon_boundary r_type="cDNA" r_start="221" r_stop="314" r_length="94" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="113232" i_stop="112659" i_length="574">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="112658" g_stop="112429" g_length="230"/>
          <reference_exon_boundary r_type="cDNA" r_start="315" r_stop="544" r_length="230" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="545" polyA_stop="554"/>
      <MATCH_line gen_id="C06SLm0135H21.1" gen_strand="-" ref_id="SGN-U343989" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>544</cumulative_length_of_scored_exons>
        <coverage percentage="0.982" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0135H21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U343989" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="113697" e_stop="113478"/>
          <exon e_start="113326" e_stop="113233"/>
          <exon e_start="112658" e_stop="112429"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGAGAAAAAAACTAATTCATGGGATTAATCATGAAGTTGGATGGAACAAAAATAATAATAACAATAATAATAATAATCATAGACACAATATTGGAATTAGAAATTCCATGTATGTGAAGGTTAAAATGGAAGGAGTAGCCATTGGAAGAAAAATTGATCTAATGTTATATAATTCTTACCAAATCCTTACTAACACTTTGCTCCAAATGTTTAATAAATGTAAGTAATTAATTCACTCCTATTATTATATAAAAATATGAAAATTAAAATAGCATGTCTTCTTTTTTTTCTTTTCATTTTTTACAAAATAACAATAAAGAATTAATTTAAGACTTGAATTACTAATTAAGTTTGGTTAATTTTGATGCAGCACATGAGAGTTGTGATGAAAATGATGGACGCTTTACACTACTGTACCAAGACAAAGAAGGAGATTGGATGCTTGCTGGAGATGTACCATGGGAGTATGTACCTTACCTTTTCTATCCTTTCACGTAAATTCAGTAACTTTTACTCCGACTTAGATACGTAGTCAAAAATTTACTAACATCTCTGGATGAATACTCTCTTCGTTTATTTATATTTGTCATGTTACGTTTTTCAAAATTTAATTTGACTAATTTTCAAAGTTAAATTAAATTATATTAATTCGACATTTTAAACAAAAAATTTAGATATTCAAAAACTATATGAAAAGTATTATAAATTACAATTTTTTTGCATATCGATATGATGAAAAAAAATATATTTTATAAAGTTAGTCAAAGTTTTTATAGTTTTGACTCTAAAAATAGAAATAATGATAAACAATAGTGAAATGAAGGAGTATTTGATTGTAAACATGATTTTTATTGTATATATTTTCTTGAAATTATGTAAAAATTATAAACTTTAAATTCAGGAGTACTCGTTGTTATTGCTACACCATTATTTCTATTTAATTTAAGACGAGTAAAAATATAAATTAGAAATTGTTTTCCAGTATTTATTTTCCAGTATTTATTCAGATTATATATAATTATTGATTTAATTTTGCAGAACATTCATGGAGACAGTTCAGAGAATACAGATTCTAAGTAATTGGAAGAGTGGAGGAAGCACAAGAAAATCATCCCATATTCCTCAACAGTTTTGATTATATTATATTTAGTTTAATTAGTAAAGAATGTTGAAGGTAATTGATTAAAAGATATGAAGAAGAAAAAATTAGTTAAATGAGTTTGACATTGTAATTTTATTATCCTATAATGTAATTTTATATTTATTTT</genome_strand>
        <mrna_strand>TGGAGAAAAAAACTAATTCATGGGATTAATCATGAAGTTGGATGGAACAAAAATAATAATAACAATAATAATAATAATCATAGACACAATATTGGAATTAGAAATTCCATGTATGTGAAGGTTAAAATGGAAGGAGTAGCCATTGGAAGAAAAATTGATCTAATGTTATATAATTCTTACCAAATCCTTACTAACACTTTGCTCCAAATGTTTAATAAAT.......................................................................................................................................................CACATGAGAGTTGTGATGAAAATGATGGACGCTTTACACTACTGTACCAAGACAAAGAAGGAGATTGGATGCTTGCTGGAGATGTACCATGGGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACATTCATGGAGACAGTTCAGAGAATACAGATTCTAAGTAATTGGAAGAGTGGAGGAAGCACAAGAAAATCATCCCATATTCCTCAACAGTTTTGATTATATTATATTTAGTTTAATTAGTAAAGAATGTTGAAGGTAATTGATTAAAAGATATGAAGAAGAAAAAATTAGTTAAATGAGTTTGACATTGTAATTTTATTATCCTATAATGTAATTTTATATTAATTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>18</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="+" PGL_start="2367" PGL_stop="5622"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="2367" e_stop="2695"/>
            <exon e_start="3558" e_stop="3657"/>
            <exon e_start="3827" e_stop="3926"/>
            <exon e_start="4617" e_stop="4705"/>
            <exon e_start="5116" e_stop="5622"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.965" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.966" acc_prob="0.975" e_score="1.000"/>
          <exon-only e_score="0.974"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="2367" e_stop="2695" e_length="329"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="1.000">
            <gDNA_intron_boundary i_start="2696" i_stop="3557" i_length="862"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="3558" e_stop="3657" e_length="100"/>
          </exon>
          <intron i_serial="2" don_prob="0.965" acc_prob="0.998">
            <gDNA_intron_boundary i_start="3658" i_stop="3826" i_length="169"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="3827" e_stop="3926" e_length="100"/>
          </exon>
          <intron i_serial="3" don_prob="0.991" acc_prob="0.997">
            <gDNA_intron_boundary i_start="3927" i_stop="4616" i_length="690"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="4617" e_stop="4705" e_length="89"/>
          </exon>
          <intron i_serial="4" don_prob="0.966" acc_prob="0.975">
            <gDNA_intron_boundary i_start="4706" i_stop="5115" i_length="410"/>
          </intron>
          <exon e_serial="5" e_score="0.974">
            <gDNA_exon_boundary e_start="5116" e_stop="5622" e_length="507"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2367" stop="2695"/>
              <exon start="3558" stop="3657"/>
              <exon start="3827" stop="3926"/>
              <exon start="4617" stop="4705"/>
              <exon start="5116" stop="5622"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U328021" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTAAATATAATAATAATAATAATTCTAAAACAATAACAACACTAATATTAGAAAACTTAAGGAGATCAAATTAGAGGTCTTTAAAATGGTGATGTTATGAATCAAATATAATTTTAGTTTACTACTTATAAATGGTGTACTAGTTATGGAAGTTTTAAAGAGGGATGAAGAAGATGTTAGTCCTAGATTTTCATTTCAAAAGAATGTATCATCATTGTCTTGTGTAGTACCACCATTCTTGCTCAGCCCACAAAAGAGCTTGCACTACAACAAGTTACCTGAGGAACCGCTCAATCTCACAGTACTCAAATTGGATGGCTCTTCCTTTG : ATATTAAAGTTGCAAGGAATGGGACAGTGGCGGAGCTGAAACAGGCGGTGGAATCTGCCTTCAGTCATTTTCCAAAGACAGGAACAGGCAAGGTTTCATG : GTCACATTTATGGGGACATTTTTGCTTGAGCTACGATGGGCGGAAGCTACTTACTGATAATGATTTGTTAGGAACCTATCGGATCAAGGATGGCGATAAG : CTCAGTTTTATGAGGCATGTCTCCATCAGTTACAATCTGGTCAAAACGCGATCAGAGAAAGAGGACTCTAGTAAGAATGAACCTAGCAT : ATCAAAAGGCTGTGAAAGCAGACAACGGAGAGGAGAACGAGAGGGTAATCACCATCAAGATGACTTATCAGAGAACCAAAACAATATTCATGACAACAACAGGGGTGTTGCAGCTAATTGTGAGTCCAGGCTGGTCCATTTGTTTAGAGGGTGGCTCCCATACAAATTGACAAGCCCAGAGAAGAGAATGAAACAGAAGAGCAGGACATCGAGTTCACGCGATGGTTTACTTATGGAGTTCTAACAGTGTTGTGCTGTGATTAGTACTTTTGAAAGAGAGGAATTCATCAACTGTTTGCAAATGTCAAAGAGAGTTGGAGAAGTTAAAGCTCTAAACTTTTGAGTATCCAGTGACTTTAGTGTCCAACCTGATTCTGTAAACAAGATCAGTTGCCTGCCTATGCATCTCTTCTATTTCTTCATTTTGCATATCAAAATTAATTGTGTAGAACACTTGGTCATTAGAAACAACAAATCCACAATTATCAGACTTGAACTTCTGCATTC</gDNA_template>
            <first_frame> L  N  I  I  I  I  I  I  L  K  Q  *  Q  H  *  Y  *  K  T  *  G  D  Q  I  R  G  L  *  N  G  D  V  M  N  Q  I  *  F  *  F  T  T  Y  K  W  C  T  S  Y  G  S  F  K  E  G  *  R  R  C  *  S  *  I  F  I  S  K  E  C  I  I  I  V  L  C  S  T  T  I  L  A  Q  P  T  K  E  L  A  L  Q  Q  V  T  *  G  T  A  Q  S  H  S  T  Q  I  G  W  L  F  L  * :   Y  *  S  C  K  E  W  D  S  G  G  A  E  T  G  G  G  I  C  L  Q  S  F  S  K  D  R  N  R  Q  G  F  M  :  V  T  F  M  G  T  F  L  L  E  L  R  W  A  E  A  T  Y  *  *  *  F  V  R  N  L  S  D  Q  G  W  R  *   : A  Q  F  Y  E  A  C  L  H  Q  L  Q  S  G  Q  N  A  I  R  E  R  G  L  *  *  E  *  T  *  H  :  I  K  R  L  *  K  Q  T  T  E  R  R  T  R  G  *  S  P  S  R  *  L  I  R  E  P  K  Q  Y  S  *  Q  Q  Q  G  C  C  S  *  L  *  V  Q  A  G  P  F  V  *  R  V  A  P  I  Q  I  D  K  P  R  E  E  N  E  T  E  E  Q  D  I  E  F  T  R  W  F  T  Y  G  V  L  T  V  L  C  C  D  *  Y  F  *  K  R  G  I  H  Q  L  F  A  N  V  K  E  S  W  R  S  *  S  S  K  L  L  S  I  Q  *  L  *  C  P  T  *  F  C  K  Q  D  Q  L  P  A  Y  A  S  L  L  F  L  H  F  A  Y  Q  N  *  L  C  R  T  L  G  H  *  K  Q  Q  I  H  N  Y  Q  T  *  T  S  A  F </first_frame>
            <second_frame>  *  I  *  *  *  *  *  F  *  N  N  N  N  T  N  I  R  K  L  K  E  I  K  L  E  V  F  K  M  V  M  L  *  I  K  Y  N  F  S  L  L  L  I  N  G  V  L  V  M  E  V  L  K  R  D  E  E  D  V  S  P  R  F  S  F  Q  K  N  V  S  S  L  S  C  V  V  P  P  F  L  L  S  P  Q  K  S  L  H  Y  N  K  L  P  E  E  P  L  N  L  T  V  L  K  L  D  G  S  S  F   : D  I  K  V  A  R  N  G  T  V  A  E  L  K  Q  A  V  E  S  A  F  S  H  F  P  K  T  G  T  G  K  V  S  W :   S  H  L  W  G  H  F  C  L  S  Y  D  G  R  K  L  L  T  D  N  D  L  L  G  T  Y  R  I  K  D  G  D  K  :  L  S  F  M  R  H  V  S  I  S  Y  N  L  V  K  T  R  S  E  K  E  D  S  S  K  N  E  P  S  I :   S  K  G  C  E  S  R  Q  R  R  G  E  R  E  G  N  H  H  Q  D  D  L  S  E  N  Q  N  N  I  H  D  N  N  R  G  V  A  A  N  C  E  S  R  L  V  H  L  F  R  G  W  L  P  Y  K  L  T  S  P  E  K  R  M  K  Q  K  S  R  T  S  S  S  R  D  G  L  L  M  E  F  *  Q  C  C  A  V  I  S  T  F  E  R  E  E  F  I  N  C  L  Q  M  S  K  R  V  G  E  V  K  A  L  N  F  *  V  S  S  D  F  S  V  Q  P  D  S  V  N  K  I  S  C  L  P  M  H  L  F  Y  F  F  I  L  H  I  K  I  N  C  V  E  H  L  V  I  R  N  N  K  S  T  I  I  R  L  E  L  L  H   </second_frame>
            <third_frame>   K  Y  N  N  N  N  N  S  K  T  I  T  T  L  I  L  E  N  L  R  R  S  N  *  R  S  L  K  W  *  C  Y  E  S  N  I  I  L  V  Y  Y  L  *  M  V  Y  *  L  W  K  F  *  R  G  M  K  K  M  L  V  L  D  F  H  F  K  R  M  Y  H  H  C  L  V  *  Y  H  H  S  C  S  A  H  K  R  A  C  T  T  T  S  Y  L  R  N  R  S  I  S  Q  Y  S  N  W  M  A  L  P  L  :  I  L  K  L  Q  G  M  G  Q  W  R  S  *  N  R  R  W  N  L  P  S  V  I  F  Q  R  Q  E  Q  A  R  F  H   : G  H  I  Y  G  D  I  F  A  *  A  T  M  G  G  S  Y  L  L  I  M  I  C  *  E  P  I  G  S  R  M  A  I  S :   S  V  L  *  G  M  S  P  S  V  T  I  W  S  K  R  D  Q  R  K  R  T  L  V  R  M  N  L  A   : Y  Q  K  A  V  K  A  D  N  G  E  E  N  E  R  V  I  T  I  K  M  T  Y  Q  R  T  K  T  I  F  M  T  T  T  G  V  L  Q  L  I  V  S  P  G  W  S  I  C  L  E  G  G  S  H  T  N  *  Q  A  Q  R  R  E  *  N  R  R  A  G  H  R  V  H  A  M  V  Y  L  W  S  S  N  S  V  V  L  *  L  V  L  L  K  E  R  N  S  S  T  V  C  K  C  Q  R  E  L  E  K  L  K  L  *  T  F  E  Y  P  V  T  L  V  S  N  L  I  L  *  T  R  S  V  A  C  L  C  I  S  S  I  S  S  F  C  I  S  K  L  I  V  *  N  T  W  S  L  E  T  T  N  P  Q  L  S  D  L  N  F  C  I  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06SLm0135H21.1" strand="+"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="2467" stop="2695"/>
                    <exon start="3558" stop="3657"/>
                    <exon start="3827" stop="3926"/>
                    <exon start="4617" stop="4705"/>
                    <exon start="5116" stop="5359"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>759</number_coding_nucleotides>
                  <number_encoded_amino_acids>253</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IKYNFSLLLINGVLVMEVLKRDEEDVSPRFSFQKNVSSLSCVVPPFLLSPQKSLHYNKLPEEPLNLTVLKLDGSSFDIKVARNGTVAELKQAVESAFSHFPKTGTGKVSWSHLWGHFCLSYDGRKLLTDNDLLGTYRIKDGDKLSFMRHVSISYNLVKTRSEKEDSSKNEPSISKGCESRQRRGEREGNHHQDDLSENQNNIHDNNRGVAANCESRLVHLFRGWLPYKLTSPEKRMKQKSRTSSSRDGLLMEF*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="+" PGL_start="6284" PGL_stop="7184"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="6284" e_stop="7184"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.989"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.989">
            <gDNA_exon_boundary e_start="6284" e_stop="7184" e_length="901"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="6284" stop="7184"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U313789" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAAATCAAGAACCGAACCTCTCAAAAAAAGATTTGTTTTTTTTACAACTGCAAAATCCCAAGTTGAAGAAGAAGAAGCCATGGCCAACATGATGATGAGCTCCTCCAAAGTTTTAATCACTTCTTCATCCTCCACCATCCCTCCATCACCAAGATTCAAACTTTCCCTCACCCAAATCCCTTTTCCAAAACTACCCCTCCCCAAATCACCCAAATCCCTTGAAACCCTTTCAATCCCATCAACTCTCAAGTCCATTTCTGTCATTCTTGCAAGCTCATTGGCCATGGCACCACCTTCGCTAGCAGAGGAAATTGAAAAAGCTTCCCTTTTTGACTTCAACTTGACACTCCCAATCATGATGGCTGAATTCCTCTTTCTCATGTTTGCTTTAGACAAGATTTACTTCAGCCCATTAGGGAAATTCATGGATGAAAGAGATTCTGCCATTAAGGAGAAATTGAGCAGTGTGAAGGACACCTCTGCTGAAGTGAAGCAACTGGAAGACCAGGCTGCTGCAATTATGAAGGCTGCAAGGGCTGAGATATCAGCAGCATTGAACAAGATGAAGAAAGAGACTCAGCAAGAAGTAGAGCAGAAGATTGCAGAAGGAAGGAAGAAAGTTGAGGCTGAATTGCAAGAAGCTTTGGCTAGCTTAGAGAGTCAAAAGGAGGAGACAATCAAGAGTCTTGATTCTCAGATTGCTGCCCTTAGTGATGAGATTGTCAAGAAAGTCCTTCCTGTCAGTAACTAATTCTGAAAAGTTGTAATGTCTTTTTCTTGGGATTGGTAAGAGTTAACAGCTTGTTTGGATGGATGCTTCTTACATGTAATATTGTACCGTGTTGTTAGTTTAAATACAAATGTTTATTTTGATTGTTCATTATATCATATCATCAAATCC</gDNA_template>
            <first_frame> K  I  K  N  R  T  S  Q  K  K  I  C  F  F  Y  N  C  K  I  P  S  *  R  R  R  S  H  G  Q  H  D  D  E  L  L  Q  S  F  N  H  F  F  I  L  H  H  P  S  I  T  K  I  Q  T  F  P  H  P  N  P  F  S  K  T  T  P  P  Q  I  T  Q  I  P  *  N  P  F  N  P  I  N  S  Q  V  H  F  C  H  S  C  K  L  I  G  H  G  T  T  F  A  S  R  G  N  *  K  S  F  P  F  *  L  Q  L  D  T  P  N  H  D  G  *  I  P  L  S  H  V  C  F  R  Q  D  L  L  Q  P  I  R  E  I  H  G  *  K  R  F  C  H  *  G  E  I  E  Q  C  E  G  H  L  C  *  S  E  A  T  G  R  P  G  C  C  N  Y  E  G  C  K  G  *  D  I  S  S  I  E  Q  D  E  E  R  D  S  A  R  S  R  A  E  D  C  R  R  K  E  E  S  *  G  *  I  A  R  S  F  G  *  L  R  E  S  K  G  G  D  N  Q  E  S  *  F  S  D  C  C  P  *  *  *  D  C  Q  E  S  P  S  C  Q  *  L  I  L  K  S  C  N  V  F  F  L  G  L  V  R  V  N  S  L  F  G  W  M  L  L  T  C  N  I  V  P  C  C  *  F  K  Y  K  C  L  F  *  L  F  I  I  S  Y  H  Q  I  </first_frame>
            <second_frame>  K  S  R  T  E  P  L  K  K  R  F  V  F  F  T  T  A  K  S  Q  V  E  E  E  E  A  M  A  N  M  M  M  S  S  S  K  V  L  I  T  S  S  S  S  T  I  P  P  S  P  R  F  K  L  S  L  T  Q  I  P  F  P  K  L  P  L  P  K  S  P  K  S  L  E  T  L  S  I  P  S  T  L  K  S  I  S  V  I  L  A  S  S  L  A  M  A  P  P  S  L  A  E  E  I  E  K  A  S  L  F  D  F  N  L  T  L  P  I  M  M  A  E  F  L  F  L  M  F  A  L  D  K  I  Y  F  S  P  L  G  K  F  M  D  E  R  D  S  A  I  K  E  K  L  S  S  V  K  D  T  S  A  E  V  K  Q  L  E  D  Q  A  A  A  I  M  K  A  A  R  A  E  I  S  A  A  L  N  K  M  K  K  E  T  Q  Q  E  V  E  Q  K  I  A  E  G  R  K  K  V  E  A  E  L  Q  E  A  L  A  S  L  E  S  Q  K  E  E  T  I  K  S  L  D  S  Q  I  A  A  L  S  D  E  I  V  K  K  V  L  P  V  S  N  *  F  *  K  V  V  M  S  F  S  W  D  W  *  E  L  T  A  C  L  D  G  C  F  L  H  V  I  L  Y  R  V  V  S  L  N  T  N  V  Y  F  D  C  S  L  Y  H  I  I  K  S </second_frame>
            <third_frame>   N  Q  E  P  N  L  S  K  K  D  L  F  F  L  Q  L  Q  N  P  K  L  K  K  K  K  P  W  P  T  *  *  *  A  P  P  K  F  *  S  L  L  H  P  P  P  S  L  H  H  Q  D  S  N  F  P  S  P  K  S  L  F  Q  N  Y  P  S  P  N  H  P  N  P  L  K  P  F  Q  S  H  Q  L  S  S  P  F  L  S  F  L  Q  A  H  W  P  W  H  H  L  R  *  Q  R  K  L  K  K  L  P  F  L  T  S  T  *  H  S  Q  S  *  W  L  N  S  S  F  S  C  L  L  *  T  R  F  T  S  A  H  *  G  N  S  W  M  K  E  I  L  P  L  R  R  N  *  A  V  *  R  T  P  L  L  K  *  S  N  W  K  T  R  L  L  Q  L  *  R  L  Q  G  L  R  Y  Q  Q  H  *  T  R  *  R  K  R  L  S  K  K  *  S  R  R  L  Q  K  E  G  R  K  L  R  L  N  C  K  K  L  W  L  A  *  R  V  K  R  R  R  Q  S  R  V  L  I  L  R  L  L  P  L  V  M  R  L  S  R  K  S  F  L  S  V  T  N  S  E  K  L  *  C  L  F  L  G  I  G  K  S  *  Q  L  V  W  M  D  A  S  Y  M  *  Y  C  T  V  L  L  V  *  I  Q  M  F  I  L  I  V  H  Y  I  I  S  S  N   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06SLm0135H21.1" strand="+"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="6285" stop="7034"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>747</number_coding_nucleotides>
                  <number_encoded_amino_acids>249</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KSRTEPLKKRFVFFTTAKSQVEEEEAMANMMMSSSKVLITSSSSTIPPSPRFKLSLTQIPFPKLPLPKSPKSLETLSIPSTLKSISVILASSLAMAPPSLAEEIEKASLFDFNLTLPIMMAEFLFLMFALDKIYFSPLGKFMDERDSAIKEKLSSVKDTSAEVKQLEDQAAAIMKAARAEISAALNKMKKETQQEVEQKIAEGRKKVEAELQEALASLESQKEETIKSLDSQIAALSDEIVKKVLPVSN*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="+" PGL_start="9567" PGL_stop="10386"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="9567" e_stop="10386"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.989"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.989">
            <gDNA_exon_boundary e_start="9567" e_stop="10386" e_length="820"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="9567" stop="10386"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U313788" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATCCCAAGTTCTAAGAAGCCATGGCCAACATGATTATGAGCTCCTCCAAAGCCTTAATCACTTCTTCATCCTCCACCATCCCTTCATCTCCAAGATTCAAACTTTCCCTCACCCAAATCCCTTTTCCAAAACTACCCCTCCCCAGATCACCCAAATCCCTTGAAACCCTCTCAATCCCATCAACTCTCAAGTCCATTTCAGTCATTCTTGCAAGCTCATTGGCTATTGCACCACCTTCACTAGCAGAAGAAATTGAAAAAGCTTCCCTTTTTGACTTCAACTTGACACTTCCCACCATGATGGCTGAATTCCTGTTTCTCATGTTTGCTTTAGACAAGATTTACTTCAGCCCATTAGGGAAATTCATGGATGAAAGAGATTCTGCTATTAAGGAGAAACTTAGCAGTGTAAAGGACACATCTACTGAAGTGAAGCAACTGGAAGACCAAGCTGCTGCAATTATGAAGGCTGCAAGGGCTGAGATATCAGCAGCATTGAACAAGATGAAGAAAGAGACTCAGCAAGAAGTGGAACAGAAGATTGCAGAAGGAAGGAAGAAAGTTGAGGCTGAATTGCTAGAAGCTTTGGCTAGTTTAGAGAATCAAAAAGAGGAGACAATGAAGAGTCTTGATTCTCAGATTGCTGCTCTTAGTGATGAGATTGTCAAGAAAGTTCTTCCTGCCAGTAATTAATTCTGAAAAATTTGTCTAGTAAAGATATATAAATGTGAAAATATTTGGTCTTTTTATATCATGAATCTCATGTGTACATCTTGGTTTTTGGTAATAATGAGGATTCTAAGTGATTTTTCAGGATCTTG</gDNA_template>
            <first_frame> I  P  S  S  K  K  P  W  P  T  *  L  *  A  P  P  K  P  *  S  L  L  H  P  P  P  S  L  H  L  Q  D  S  N  F  P  S  P  K  S  L  F  Q  N  Y  P  S  P  D  H  P  N  P  L  K  P  S  Q  S  H  Q  L  S  S  P  F  Q  S  F  L  Q  A  H  W  L  L  H  H  L  H  *  Q  K  K  L  K  K  L  P  F  L  T  S  T  *  H  F  P  P  *  W  L  N  S  C  F  S  C  L  L  *  T  R  F  T  S  A  H  *  G  N  S  W  M  K  E  I  L  L  L  R  R  N  L  A  V  *  R  T  H  L  L  K  *  S  N  W  K  T  K  L  L  Q  L  *  R  L  Q  G  L  R  Y  Q  Q  H  *  T  R  *  R  K  R  L  S  K  K  W  N  R  R  L  Q  K  E  G  R  K  L  R  L  N  C  *  K  L  W  L  V  *  R  I  K  K  R  R  Q  *  R  V  L  I  L  R  L  L  L  L  V  M  R  L  S  R  K  F  F  L  P  V  I  N  S  E  K  F  V  *  *  R  Y  I  N  V  K  I  F  G  L  F  I  S  *  I  S  C  V  H  L  G  F  W  *  *  *  G  F  *  V  I  F  Q  D  L  </first_frame>
            <second_frame>  S  Q  V  L  R  S  H  G  Q  H  D  Y  E  L  L  Q  S  L  N  H  F  F  I  L  H  H  P  F  I  S  K  I  Q  T  F  P  H  P  N  P  F  S  K  T  T  P  P  Q  I  T  Q  I  P  *  N  P  L  N  P  I  N  S  Q  V  H  F  S  H  S  C  K  L  I  G  Y  C  T  T  F  T  S  R  R  N  *  K  S  F  P  F  *  L  Q  L  D  T  S  H  H  D  G  *  I  P  V  S  H  V  C  F  R  Q  D  L  L  Q  P  I  R  E  I  H  G  *  K  R  F  C  Y  *  G  E  T  *  Q  C  K  G  H  I  Y  *  S  E  A  T  G  R  P  S  C  C  N  Y  E  G  C  K  G  *  D  I  S  S  I  E  Q  D  E  E  R  D  S  A  R  S  G  T  E  D  C  R  R  K  E  E  S  *  G  *  I  A  R  S  F  G  *  F  R  E  S  K  R  G  D  N  E  E  S  *  F  S  D  C  C  S  *  *  *  D  C  Q  E  S  S  S  C  Q  *  L  I  L  K  N  L  S  S  K  D  I  *  M  *  K  Y  L  V  F  L  Y  H  E  S  H  V  Y  I  L  V  F  G  N  N  E  D  S  K  *  F  F  R  I  L </second_frame>
            <third_frame>   P  K  F  *  E  A  M  A  N  M  I  M  S  S  S  K  A  L  I  T  S  S  S  S  T  I  P  S  S  P  R  F  K  L  S  L  T  Q  I  P  F  P  K  L  P  L  P  R  S  P  K  S  L  E  T  L  S  I  P  S  T  L  K  S  I  S  V  I  L  A  S  S  L  A  I  A  P  P  S  L  A  E  E  I  E  K  A  S  L  F  D  F  N  L  T  L  P  T  M  M  A  E  F  L  F  L  M  F  A  L  D  K  I  Y  F  S  P  L  G  K  F  M  D  E  R  D  S  A  I  K  E  K  L  S  S  V  K  D  T  S  T  E  V  K  Q  L  E  D  Q  A  A  A  I  M  K  A  A  R  A  E  I  S  A  A  L  N  K  M  K  K  E  T  Q  Q  E  V  E  Q  K  I  A  E  G  R  K  K  V  E  A  E  L  L  E  A  L  A  S  L  E  N  Q  K  E  E  T  M  K  S  L  D  S  Q  I  A  A  L  S  D  E  I  V  K  K  V  L  P  A  S  N  *  F  *  K  I  C  L  V  K  I  Y  K  C  E  N  I  W  S  F  Y  I  M  N  L  M  C  T  S  W  F  L  V  I  M  R  I  L  S  D  F  S  G  S   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06SLm0135H21.1" strand="+"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="9581" stop="10258"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>675</number_coding_nucleotides>
                  <number_encoded_amino_acids>225</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EAMANMIMSSSKALITSSSSTIPSSPRFKLSLTQIPFPKLPLPRSPKSLETLSIPSTLKSISVILASSLAIAPPSLAEEIEKASLFDFNLTLPTMMAEFLFLMFALDKIYFSPLGKFMDERDSAIKEKLSSVKDTSTEVKQLEDQAAAIMKAARAEISAALNKMKKETQQEVEQKIAEGRKKVEAELLEALASLENQKEETMKSLDSQIAALSDEIVKKVLPASN*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="-" PGL_start="14156" PGL_stop="10828"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="14156" e_stop="13934"/>
            <exon e_start="12851" e_stop="12803"/>
            <exon e_start="12198" e_stop="12136"/>
            <exon e_start="12057" e_stop="11993"/>
            <exon e_start="11268" e_stop="10828"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.254" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.408" acc_prob="0.932" e_score="1.000"/>
          <exon-intron don_prob="0.952" acc_prob="0.979" e_score="1.000"/>
          <exon-intron don_prob="0.993" acc_prob="1.000" e_score="1.000"/>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="14156" e_stop="13934" e_length="223"/>
          </exon>
          <intron i_serial="1" don_prob="0.254" acc_prob="0.994">
            <gDNA_intron_boundary i_start="13933" i_stop="12852" i_length="1082"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="12851" e_stop="12803" e_length="49"/>
          </exon>
          <intron i_serial="2" don_prob="0.408" acc_prob="0.932">
            <gDNA_intron_boundary i_start="12802" i_stop="12199" i_length="604"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="12198" e_stop="12136" e_length="63"/>
          </exon>
          <intron i_serial="3" don_prob="0.952" acc_prob="0.979">
            <gDNA_intron_boundary i_start="12135" i_stop="12058" i_length="78"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="12057" e_stop="11993" e_length="65"/>
          </exon>
          <intron i_serial="4" don_prob="0.993" acc_prob="1.000">
            <gDNA_intron_boundary i_start="11992" i_stop="11269" i_length="724"/>
          </intron>
          <exon e_serial="5" e_score="0.998">
            <gDNA_exon_boundary e_start="11268" e_stop="10828" e_length="441"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="14156" stop="13934"/>
              <exon start="12851" stop="12803"/>
              <exon start="12198" stop="12136"/>
              <exon start="12057" stop="11993"/>
              <exon start="11268" stop="10828"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U315563" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ATCTGTTACTGTTTTAGTATAATTTTCCCCAAATTATACGGATCCTCTCTTCAAAAGGGAAAGGAGGCTGCGAAATTAGGGTTTACCTGAAGTAATCAGCAAATCGATGGAAGGAATCACAGACGGAGTGAACAAGATGAGTGTCTCAGAGACACAGAAGAAGAACAGAATCCAAGTTTCTAACACTAAGAAATCACTCTTCTTTTATGTTAATCTCTCAAAG : AGGTACATGCAACAGTACAATGAAGTGGAACTCTCTGCTCTTGGGATGG : CTATTTCGACAGTGGTTACTATTGCCGAAATTCTCAAGAACAATGGATTTGCTGTTGAGAAGA : AGATCAGGACACTCACCGTGGACATGAGGGATGAACCAGGAGCCCGACCGATACCAAAAGCAAAG : ATTGAAATAGTGCTGGGCAAGACTGAGAAGTTTGATGAGTTAATGGCTGCAGAAGCCGAGCAAAACGGGGACAATGAGGAGCAGCAGAACTGATTATTTCCAAATCTGTTCTCTTCCTGACTATTGAAGTTATTCCAATCTATACTGCATTCAGCTGTTGGGTTCTCTATGGCCTTTAATTTGATCTTTTGGAAAGTTTTTTTTTAAAAAAAAAGCAGCATGGTTTACTTTAAAATTCATCATTTGTTGGATGTGTATGCCTTTTTTTTTTTTTTAACCTTGCTTATCTAAGGTGGTGTTGAATGTAAACATCTTGCTGCTATCTTCACTGTAAGTGATGTGGTAATAGTTTATGCCTGGTAGTTAAAAAATTGAACAATTGGATATGTGGGTTGACATTTCTGTCATTACCTAATTAAGCATCATTAGTACTGTCTCACA</gDNA_template>
            <first_frame> I  C  Y  C  F  S  I  I  F  P  K  L  Y  G  S  S  L  Q  K  G  K  E  A  A  K  L  G  F  T  *  S  N  Q  Q  I  D  G  R  N  H  R  R  S  E  Q  D  E  C  L  R  D  T  E  E  E  Q  N  P  S  F  *  H  *  E  I  T  L  L  L  C  *  S  L  K   : E  V  H  A  T  V  Q  *  S  G  T  L  C  S  W  D  G :   Y  F  D  S  G  Y  Y  C  R  N  S  Q  E  Q  W  I  C  C  *  E  E :   D  Q  D  T  H  R  G  H  E  G  *  T  R  S  P  T  D  T  K  S  K   : D  *  N  S  A  G  Q  D  *  E  V  *  *  V  N  G  C  R  S  R  A  K  R  G  Q  *  G  A  A  E  L  I  I  S  K  S  V  L  F  L  T  I  E  V  I  P  I  Y  T  A  F  S  C  W  V  L  Y  G  L  *  F  D  L  L  E  S  F  F  L  K  K  K  Q  H  G  L  L  *  N  S  S  F  V  G  C  V  C  L  F  F  F  F  N  L  A  Y  L  R  W  C  *  M  *  T  S  C  C  Y  L  H  C  K  *  C  G  N  S  L  C  L  V  V  K  K  L  N  N  W  I  C  G  L  T  F  L  S  L  P  N  *  A  S  L  V  L  S  H  </first_frame>
            <second_frame>  S  V  T  V  L  V  *  F  S  P  N  Y  T  D  P  L  F  K  R  E  R  R  L  R  N  *  G  L  P  E  V  I  S  K  S  M  E  G  I  T  D  G  V  N  K  M  S  V  S  E  T  Q  K  K  N  R  I  Q  V  S  N  T  K  K  S  L  F  F  Y  V  N  L  S  K  :  R  Y  M  Q  Q  Y  N  E  V  E  L  S  A  L  G  M   : A  I  S  T  V  V  T  I  A  E  I  L  K  N  N  G  F  A  V  E  K   : K  I  R  T  L  T  V  D  M  R  D  E  P  G  A  R  P  I  P  K  A  K  :  I  E  I  V  L  G  K  T  E  K  F  D  E  L  M  A  A  E  A  E  Q  N  G  D  N  E  E  Q  Q  N  *  L  F  P  N  L  F  S  S  *  L  L  K  L  F  Q  S  I  L  H  S  A  V  G  F  S  M  A  F  N  L  I  F  W  K  V  F  F  *  K  K  S  S  M  V  Y  F  K  I  H  H  L  L  D  V  Y  A  F  F  F  F  L  T  L  L  I  *  G  G  V  E  C  K  H  L  A  A  I  F  T  V  S  D  V  V  I  V  Y  A  W  *  L  K  N  *  T  I  G  Y  V  G  *  H  F  C  H  Y  L  I  K  H  H  *  Y  C  L  T </second_frame>
            <third_frame>   L  L  L  F  *  Y  N  F  P  Q  I  I  R  I  L  S  S  K  G  K  G  G  C  E  I  R  V  Y  L  K  *  S  A  N  R  W  K  E  S  Q  T  E  *  T  R  *  V  S  Q  R  H  R  R  R  T  E  S  K  F  L  T  L  R  N  H  S  S  F  M  L  I  S  Q  R :   G  T  C  N  S  T  M  K  W  N  S  L  L  L  G  W  :  L  F  R  Q  W  L  L  L  P  K  F  S  R  T  M  D  L  L  L  R  R  :  R  S  G  H  S  P  W  T  *  G  M  N  Q  E  P  D  R  Y  Q  K  Q  R :   L  K  *  C  W  A  R  L  R  S  L  M  S  *  W  L  Q  K  P  S  K  T  G  T  M  R  S  S  R  T  D  Y  F  Q  I  C  S  L  P  D  Y  *  S  Y  S  N  L  Y  C  I  Q  L  L  G  S  L  W  P  L  I  *  S  F  G  K  F  F  F  K  K  K  A  A  W  F  T  L  K  F  I  I  C  W  M  C  M  P  F  F  F  F  *  P  C  L  S  K  V  V  L  N  V  N  I  L  L  L  S  S  L  *  V  M  W  *  *  F  M  P  G  S  *  K  I  E  Q  L  D  M  W  V  D  I  S  V  I  T  *  L  S  I  I  S  T  V  S   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06SLm0135H21.1" strand="-"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="14077" stop="13934"/>
                    <exon start="12851" stop="12803"/>
                    <exon start="12198" stop="12136"/>
                    <exon start="12057" stop="11993"/>
                    <exon start="11268" stop="11176"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>411</number_coding_nucleotides>
                  <number_encoded_amino_acids>137</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GLPEVISKSMEGITDGVNKMSVSETQKKNRIQVSNTKKSLFFYVNLSKRYMQQYNEVELSALGMAISTVVTIAEILKNNGFAVEKKIRTLTVDMRDEPGARPIPKAKIEIVLGKTEKFDELMAAEAEQNGDNEEQQN*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="-" PGL_start="16789" PGL_stop="16054"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="16789" e_stop="16054"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.997">
            <gDNA_exon_boundary e_start="16789" e_stop="16054" e_length="736"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16789" stop="16054"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U313184" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16426" stop="16137"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U334200" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AGAAACCAAGCTACACCACCACTTAAAGTTCTCTAGAATAAATCATGGCTGCCCTCTCCTCCACCATTTTCATATTTTCCCTTCTAATTTTGGCCACATTCACTAGTGGTTGTGGTCCATGTGAGCCAAAGCCTCACCCAACACCAAAGGCACCCCCAGTGAACCCTTATTGTCCAAGGGACACATTGAAGCTTGGTGTTTGTGCTGACCTACTTGGCCTTGTAAATGTTGCAATTGGTAGCCAAGTGACAACCCCTTGTTGCTCATTGCTTGAAGGTTTGGCTGATTTGGAAGTTGCAGCTTGTCTTTGCACTGCCATTAAGGCTAATGTACTTGGGATTGTCAAATTAGATATTCCTGTTGCTCTTAGTGCTTTGGTTAGTGCTTGTGCTAAGAAAGTTCCCACAGGTTTCAAGTGTGGTTAATTAGAGTATTAATTAGCCAAGGGTGGGGTGGGGGAGTAAAGCATATCAAATTTCAAGATTTGGTAGCTAGTTAATTAAGTTTATTGTTTTAATTAATCATTGAGTTGTAAAATGATGTTTGTGTTGTTATTTGATCTTGATTTGTGTATGTTTGATTTGTTATCTAGCTAGGTTCCTTTTTTTGTTTTGGTTGGTTGTAAAATAAATTTGTCATTTGTGCTCAATAAAGTGTGAAACATTCTTCACCTTGTGAAAACTTGCATCTATATGAAAAGTTTCAAGTTCAATGTATTGATTTTTCAAATAAGAAA</gDNA_template>
            <first_frame> R  N  Q  A  T  P  P  L  K  V  L  *  N  K  S  W  L  P  S  P  P  P  F  S  Y  F  P  F  *  F  W  P  H  S  L  V  V  V  V  H  V  S  Q  S  L  T  Q  H  Q  R  H  P  Q  *  T  L  I  V  Q  G  T  H  *  S  L  V  F  V  L  T  Y  L  A  L  *  M  L  Q  L  V  A  K  *  Q  P  L  V  A  H  C  L  K  V  W  L  I  W  K  L  Q  L  V  F  A  L  P  L  R  L  M  Y  L  G  L  S  N  *  I  F  L  L  L  L  V  L  W  L  V  L  V  L  R  K  F  P  Q  V  S  S  V  V  N  *  S  I  N  *  P  R  V  G  W  G  S  K  A  Y  Q  I  S  R  F  G  S  *  L  I  K  F  I  V  L  I  N  H  *  V  V  K  *  C  L  C  C  Y  L  I  L  I  C  V  C  L  I  C  Y  L  A  R  F  L  F  L  F  W  L  V  V  K  *  I  C  H  L  C  S  I  K  C  E  T  F  F  T  L  *  K  L  A  S  I  *  K  V  S  S  S  M  Y  *  F  F  K  *  E  </first_frame>
            <second_frame>  E  T  K  L  H  H  H  L  K  F  S  R  I  N  H  G  C  P  L  L  H  H  F  H  I  F  P  S  N  F  G  H  I  H  *  W  L  W  S  M  *  A  K  A  S  P  N  T  K  G  T  P  S  E  P  L  L  S  K  G  H  I  E  A  W  C  L  C  *  P  T  W  P  C  K  C  C  N  W  *  P  S  D  N  P  L  L  L  I  A  *  R  F  G  *  F  G  S  C  S  L  S  L  H  C  H  *  G  *  C  T  W  D  C  Q  I  R  Y  S  C  C  S  *  C  F  G  *  C  L  C  *  E  S  S  H  R  F  Q  V  W  L  I  R  V  L  I  S  Q  G  W  G  G  G  V  K  H  I  K  F  Q  D  L  V  A  S  *  L  S  L  L  F  *  L  I  I  E  L  *  N  D  V  C  V  V  I  *  S  *  F  V  Y  V  *  F  V  I  *  L  G  S  F  F  C  F  G  W  L  *  N  K  F  V  I  C  A  Q  *  S  V  K  H  S  S  P  C  E  N  L  H  L  Y  E  K  F  Q  V  Q  C  I  D  F  S  N  K  K </second_frame>
            <third_frame>   K  P  S  Y  T  T  T  *  S  S  L  E  *  I  M  A  A  L  S  S  T  I  F  I  F  S  L  L  I  L  A  T  F  T  S  G  C  G  P  C  E  P  K  P  H  P  T  P  K  A  P  P  V  N  P  Y  C  P  R  D  T  L  K  L  G  V  C  A  D  L  L  G  L  V  N  V  A  I  G  S  Q  V  T  T  P  C  C  S  L  L  E  G  L  A  D  L  E  V  A  A  C  L  C  T  A  I  K  A  N  V  L  G  I  V  K  L  D  I  P  V  A  L  S  A  L  V  S  A  C  A  K  K  V  P  T  G  F  K  C  G  *  L  E  Y  *  L  A  K  G  G  V  G  E  *  S  I  S  N  F  K  I  W  *  L  V  N  *  V  Y  C  F  N  *  S  L  S  C  K  M  M  F  V  L  L  F  D  L  D  L  C  M  F  D  L  L  S  S  *  V  P  F  F  V  L  V  G  C  K  I  N  L  S  F  V  L  N  K  V  *  N  I  L  H  L  V  K  T  C  I  Y  M  K  S  F  K  F  N  V  L  I  F  Q  I  R   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06SLm0135H21.1" strand="-"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="16748" stop="16365"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>381</number_coding_nucleotides>
                  <number_encoded_amino_acids>127</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IMAALSSTIFIFSLLILATFTSGCGPCEPKPHPTPKAPPVNPYCPRDTLKLGVCADLLGLVNVAIGSQVTTPCCSLLEGLADLEVAACLCTAIKANVLGIVKLDIPVALSALVSACAKKVPTGFKCG*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="+" PGL_start="24371" PGL_stop="27523"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="24371" e_stop="24422"/>
            <exon e_start="24623" e_stop="24865"/>
            <exon e_start="25782" e_stop="25972"/>
            <exon e_start="26357" e_stop="26520"/>
            <exon e_start="27135" e_stop="27523"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.994" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.953" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.981" acc_prob="0.997" e_score="1.000"/>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="24371" e_stop="24422" e_length="52"/>
          </exon>
          <intron i_serial="1" don_prob="0.994" acc_prob="0.999">
            <gDNA_intron_boundary i_start="24423" i_stop="24622" i_length="200"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="24623" e_stop="24865" e_length="243"/>
          </exon>
          <intron i_serial="2" don_prob="0.996" acc_prob="0.994">
            <gDNA_intron_boundary i_start="24866" i_stop="25781" i_length="916"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="25782" e_stop="25972" e_length="191"/>
          </exon>
          <intron i_serial="3" don_prob="0.953" acc_prob="0.994">
            <gDNA_intron_boundary i_start="25973" i_stop="26356" i_length="384"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="26357" e_stop="26520" e_length="164"/>
          </exon>
          <intron i_serial="4" don_prob="0.981" acc_prob="0.997">
            <gDNA_intron_boundary i_start="26521" i_stop="27134" i_length="614"/>
          </intron>
          <exon e_serial="5" e_score="0.997">
            <gDNA_exon_boundary e_start="27135" e_stop="27523" e_length="389"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24371" stop="24422"/>
              <exon start="24623" stop="24865"/>
              <exon start="25782" stop="25972"/>
              <exon start="26357" stop="26520"/>
              <exon start="27135" stop="27523"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U318687" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AATCAATCTAACGCCCATCTCTTCATCGTCTTCTTCCTCAAAAAAAGAAAAG : AGGAAGAAAGGTGCAGAGGAAGAGAGATGACGATATTGTATGCGCTGGTAGCGAGGGGATCGGTGGTATTGGCGGAGCAGAGCGGAACGTCAACGAACGCGAGTACGATCGCGAGGCAGATTTTGGAGAAAATTCCGGGGAATAATGATTCCAATGCGTCGTACTCACAGGATCGGTATATTTTCCATGTTAAACGCACGGATGGACTTACTGTTCTCTGTATGGCGGATGATAGTGCTGGAA : GGAGAATCCCTTTCGCATTTCTTGAAGAAATTCACCAAAAATTCGTGAGAACGTATGGCCGAGCAGTTCTGTCTGCGCAAGCTTATGGTATGAATGATGAATTTTCGAGGGTCCTTAGCCAGCAAATGGAATACTACTCCAGTGATCCAAATGCAGACAGAATAAACAGGCTAAAGGGTGAAATGAGTCAG : GTGCGCACTGTCATGGTTGAGAATATCGATAAAGTTCTAGAGAGAGGTGATCGCTTGGAATTGCTGGTCGATAAAACAGCTAATATGCAAGAGAATACTTTCCGCTTCAGAAAGCAGGCTCGCCGGTTCAGAAGCACTGTATGGTGGAGAAATGTCAAACTCAC : GGTGGCTCTGATATTCCTCCTCCTAGTGATAATATATGTTATTTTGGCTTTCGCTTGTCATGGACTTACACTTCCAACTTGTTTGAAGTGAGGATTACTGGATCAGCATCACATCTTTTGTCCTTAAAACATTATTTTGCAATTTTTTTCATCTAAATCAATCTTGGGGTAAAGCTTGGATGTGTGTTTTGGCATGGATTTCATCCTTGATATGTATTAATCGTGTGATATCCTTAAGCTTATAAGCAAGCCAAAACTCTTGGTTTGATAATGTAGATTGTATTTATATATAATTTTGACCCATGTGAGGAAAATGAAGGGGGTCAAATAACTCATGATTGATTTCTTGGTTTGATATCTGTTTTGAAATATATTTTGACTATCTTTTT</gDNA_template>
            <first_frame> N  Q  S  N  A  H  L  F  I  V  F  F  L  K  K  R  K   : E  E  E  R  C  R  G  R  E  M  T  I  L  Y  A  L  V  A  R  G  S  V  V  L  A  E  Q  S  G  T  S  T  N  A  S  T  I  A  R  Q  I  L  E  K  I  P  G  N  N  D  S  N  A  S  Y  S  Q  D  R  Y  I  F  H  V  K  R  T  D  G  L  T  V  L  C  M  A  D  D  S  A  G   : R  R  I  P  F  A  F  L  E  E  I  H  Q  K  F  V  R  T  Y  G  R  A  V  L  S  A  Q  A  Y  G  M  N  D  E  F  S  R  V  L  S  Q  Q  M  E  Y  Y  S  S  D  P  N  A  D  R  I  N  R  L  K  G  E  M  S  Q  :  V  R  T  V  M  V  E  N  I  D  K  V  L  E  R  G  D  R  L  E  L  L  V  D  K  T  A  N  M  Q  E  N  T  F  R  F  R  K  Q  A  R  R  F  R  S  T  V  W  W  R  N  V  K  L  T :   V  A  L  I  F  L  L  L  V  I  I  Y  V  I  L  A  F  A  C  H  G  L  T  L  P  T  C  L  K  *  G  L  L  D  Q  H  H  I  F  C  P  *  N  I  I  L  Q  F  F  S  S  K  S  I  L  G  *  S  L  D  V  C  F  G  M  D  F  I  L  D  M  Y  *  S  C  D  I  L  K  L  I  S  K  P  K  L  L  V  *  *  C  R  L  Y  L  Y  I  I  L  T  H  V  R  K  M  K  G  V  K  *  L  M  I  D  F  L  V  *  Y  L  F  *  N  I  F  *  L  S  F  </first_frame>
            <second_frame>  I  N  L  T  P  I  S  S  S  S  S  S  S  K  K  E  K  :  R  K  K  G  A  E  E  E  R  *  R  Y  C  M  R  W  *  R  G  D  R  W  Y  W  R  S  R  A  E  R  Q  R  T  R  V  R  S  R  G  R  F  W  R  K  F  R  G  I  M  I  P  M  R  R  T  H  R  I  G  I  F  S  M  L  N  A  R  M  D  L  L  F  S  V  W  R  M  I  V  L  E  :  G  E  S  L  S  H  F  L  K  K  F  T  K  N  S  *  E  R  M  A  E  Q  F  C  L  R  K  L  M  V  *  M  M  N  F  R  G  S  L  A  S  K  W  N  T  T  P  V  I  Q  M  Q  T  E  *  T  G  *  R  V  K  *  V  R :   C  A  L  S  W  L  R  I  S  I  K  F  *  R  E  V  I  A  W  N  C  W  S  I  K  Q  L  I  C  K  R  I  L  S  A  S  E  S  R  L  A  G  S  E  A  L  Y  G  G  E  M  S  N  S   : R  W  L  *  Y  S  S  S  *  *  *  Y  M  L  F  W  L  S  L  V  M  D  L  H  F  Q  L  V  *  S  E  D  Y  W  I  S  I  T  S  F  V  L  K  T  L  F  C  N  F  F  H  L  N  Q  S  W  G  K  A  W  M  C  V  L  A  W  I  S  S  L  I  C  I  N  R  V  I  S  L  S  L  *  A  S  Q  N  S  W  F  D  N  V  D  C  I  Y  I  *  F  *  P  M  *  G  K  *  R  G  S  N  N  S  *  L  I  S  W  F  D  I  C  F  E  I  Y  F  D  Y  L  F </second_frame>
            <third_frame>   S  I  *  R  P  S  L  H  R  L  L  P  Q  K  K  K  R :   G  R  K  V  Q  R  K  R  D  D  D  I  V  C  A  G  S  E  G  I  G  G  I  G  G  A  E  R  N  V  N  E  R  E  Y  D  R  E  A  D  F  G  E  N  S  G  E  *  *  F  Q  C  V  V  L  T  G  S  V  Y  F  P  C  *  T  H  G  W  T  Y  C  S  L  Y  G  G  *  *  C  W  K :   E  N  P  F  R  I  S  *  R  N  S  P  K  I  R  E  N  V  W  P  S  S  S  V  C  A  S  L  W  Y  E  *  *  I  F  E  G  P  *  P  A  N  G  I  L  L  Q  *  S  K  C  R  Q  N  K  Q  A  K  G  *  N  E  S   : G  A  H  C  H  G  *  E  Y  R  *  S  S  R  E  R  *  S  L  G  I  A  G  R  *  N  S  *  Y  A  R  E  Y  F  P  L  Q  K  A  G  S  P  V  Q  K  H  C  M  V  E  K  C  Q  T  H  :  G  G  S  D  I  P  P  P  S  D  N  I  C  Y  F  G  F  R  L  S  W  T  Y  T  S  N  L  F  E  V  R  I  T  G  S  A  S  H  L  L  S  L  K  H  Y  F  A  I  F  F  I  *  I  N  L  G  V  K  L  G  C  V  F  W  H  G  F  H  P  *  Y  V  L  I  V  *  Y  P  *  A  Y  K  Q  A  K  T  L  G  L  I  M  *  I  V  F  I  Y  N  F  D  P  C  E  E  N  E  G  G  Q  I  T  H  D  *  F  L  G  L  I  S  V  L  K  Y  I  L  T  I  F   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06SLm0135H21.1" strand="+"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="24371" stop="24422"/>
                    <exon start="24623" stop="24865"/>
                    <exon start="25782" stop="25972"/>
                    <exon start="26357" stop="26520"/>
                    <exon start="27135" stop="27225"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>738</number_coding_nucleotides>
                  <number_encoded_amino_acids>246</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NQSNAHLFIVFFLKKRKEEERCRGREMTILYALVARGSVVLAEQSGTSTNASTIARQILEKIPGNNDSNASYSQDRYIFHVKRTDGLTVLCMADDSAGRRIPFAFLEEIHQKFVRTYGRAVLSAQAYGMNDEFSRVLSQQMEYYSSDPNADRINRLKGEMSQVRTVMVENIDKVLERGDRLELLVDKTANMQENTFRFRKQARRFRSTVWWRNVKLTVALIFLLLVIIYVILAFACHGLTLPTCLK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="24404" e_stop="24511"/>
            <exon e_start="24623" e_stop="24852"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.925" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="0.970"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="24404" e_stop="24511" e_length="108"/>
          </exon>
          <intron i_serial="1" don_prob="0.925" acc_prob="0.999">
            <gDNA_intron_boundary i_start="24512" i_stop="24622" i_length="111"/>
          </intron>
          <exon e_serial="2" e_score="0.970">
            <gDNA_exon_boundary e_start="24623" e_stop="24852" e_length="230"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24404" stop="24511"/>
              <exon start="24623" stop="24852"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U336601" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTCCTCAAAAAAAGAAAAGGTAAACGCTCTACTGTAACGATCCGATTTTCTTCAAACTTAGCTCTAAATTTATATTATTGAGGCGGATCTAGAATTTGAAATTAGAAG : AGGAAGAAAGGTGCAGAGGAAGAGAGATGACGATATTGTATGCGCTGGTAGCGAGGGGATCGGTGGTATTGGCGGAGCAGAGCGGAACGTCAACGAACGCGAGTACGATCGCGAGGCAGATTTTGGAGAAAATTCCGGGGAATAATGATTCCAATGCGTCGTACTCACAGGATCGGTATATTTTCCATGTTAAACGCACGGATGGACTTACTGTTCTCTGTATGGCGGAT</gDNA_template>
            <first_frame> F  L  K  K  R  K  G  K  R  S  T  V  T  I  R  F  S  S  N  L  A  L  N  L  Y  Y  *  G  G  S  R  I  *  N  *  K  :  R  K  K  G  A  E  E  E  R  *  R  Y  C  M  R  W  *  R  G  D  R  W  Y  W  R  S  R  A  E  R  Q  R  T  R  V  R  S  R  G  R  F  W  R  K  F  R  G  I  M  I  P  M  R  R  T  H  R  I  G  I  F  S  M  L  N  A  R  M  D  L  L  F  S  V  W  R   </first_frame>
            <second_frame>  S  S  K  K  E  K  V  N  A  L  L  *  R  S  D  F  L  Q  T  *  L  *  I  Y  I  I  E  A  D  L  E  F  E  I  R  R :   G  R  K  V  Q  R  K  R  D  D  D  I  V  C  A  G  S  E  G  I  G  G  I  G  G  A  E  R  N  V  N  E  R  E  Y  D  R  E  A  D  F  G  E  N  S  G  E  *  *  F  Q  C  V  V  L  T  G  S  V  Y  F  P  C  *  T  H  G  W  T  Y  C  S  L  Y  G  G  </second_frame>
            <third_frame>   P  Q  K  K  K  R  *  T  L  Y  C  N  D  P  I  F  F  K  L  S  S  K  F  I  L  L  R  R  I  *  N  L  K  L  E   : E  E  E  R  C  R  G  R  E  M  T  I  L  Y  A  L  V  A  R  G  S  V  V  L  A  E  Q  S  G  T  S  T  N  A  S  T  I  A  R  Q  I  L  E  K  I  P  G  N  N  D  S  N  A  S  Y  S  Q  D  R  Y  I  F  H  V  K  R  T  D  G  L  T  V  L  C  M  A  D </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06SLm0135H21.1" strand="+"/>
                <serials PGL_serial="6" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="24496" stop="24511"/>
                    <exon start="24623" stop="24852"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>246</number_coding_nucleotides>
                  <number_encoded_amino_acids>82</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NLKLEEEERCRGREMTILYALVARGSVVLAEQSGTSTNASTIARQILEKIPGNNDSNASYSQDRYIFHVKRTDGLTVLCMAD</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="+" PGL_start="43673" PGL_stop="44177"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="43673" e_stop="44177"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="43673" e_stop="44177" e_length="505"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="43673" stop="44177"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U345617" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TGTTAATAGCAGCCGACAAAATTAAGAATGAGGCACATTCTATTTCGTGTTCCTCCTCCAACCAACACCTCCCACTTCCCTCTGCCCCCCTTACCCCCAAACTACAATCCTCTACATATACATATCTGTATCTAACTCTTAGTATTGCTTCAAGAAAGTTTGATTCAACTTGTAAATTTTCAATTTTGAAAGTTGGGTACTTGTTTTTTTTTGAATTGGGGTTAGCTCCATGTGGGATTCTTGAATTTTGATTTGATGAATTTCCTTCCAAGATGTTTGAGTTACAGTGAATGTAGTGGTGGAGCTGGAAGAAGTGAAATTAGGGGTGGTGAAAGTTCCAATGGTGGATTTGGGAAAGATGGGTTGTTGTGGTTTCATGATATTGGGAATTGTGGGAGTGGGGAATATTCCATGGCTATTGTGCAAGCTAATCAGGTCTTAGAGGATCAGAGCCAGATTGAGTCTGGTCCATTTGGAACTTTTGTTGGAGTCTATGATGGTCATG</gDNA_template>
            <first_frame> C  *  *  Q  P  T  K  L  R  M  R  H  I  L  F  R  V  P  P  P  T  N  T  S  H  F  P  L  P  P  L  P  P  N  Y  N  P  L  H  I  H  I  C  I  *  L  L  V  L  L  Q  E  S  L  I  Q  L  V  N  F  Q  F  *  K  L  G  T  C  F  F  L  N  W  G  *  L  H  V  G  F  L  N  F  D  L  M  N  F  L  P  R  C  L  S  Y  S  E  C  S  G  G  A  G  R  S  E  I  R  G  G  E  S  S  N  G  G  F  G  K  D  G  L  L  W  F  H  D  I  G  N  C  G  S  G  E  Y  S  M  A  I  V  Q  A  N  Q  V  L  E  D  Q  S  Q  I  E  S  G  P  F  G  T  F  V  G  V  Y  D  G  H  </first_frame>
            <second_frame>  V  N  S  S  R  Q  N  *  E  *  G  T  F  Y  F  V  F  L  L  Q  P  T  P  P  T  S  L  C  P  P  Y  P  Q  T  T  I  L  Y  I  Y  I  S  V  S  N  S  *  Y  C  F  K  K  V  *  F  N  L  *  I  F  N  F  E  S  W  V  L  V  F  F  *  I  G  V  S  S  M  W  D  S  *  I  L  I  *  *  I  S  F  Q  D  V  *  V  T  V  N  V  V  V  E  L  E  E  V  K  L  G  V  V  K  V  P  M  V  D  L  G  K  M  G  C  C  G  F  M  I  L  G  I  V  G  V  G  N  I  P  W  L  L  C  K  L  I  R  S  *  R  I  R  A  R  L  S  L  V  H  L  E  L  L  L  E  S  M  M  V  M </second_frame>
            <third_frame>   L  I  A  A  D  K  I  K  N  E  A  H  S  I  S  C  S  S  S  N  Q  H  L  P  L  P  S  A  P  L  T  P  K  L  Q  S  S  T  Y  T  Y  L  Y  L  T  L  S  I  A  S  R  K  F  D  S  T  C  K  F  S  I  L  K  V  G  Y  L  F  F  F  E  L  G  L  A  P  C  G  I  L  E  F  *  F  D  E  F  P  S  K  M  F  E  L  Q  *  M  *  W  W  S  W  K  K  *  N  *  G  W  *  K  F  Q  W  W  I  W  E  R  W  V  V  V  V  S  *  Y  W  E  L  W  E  W  G  I  F  H  G  Y  C  A  S  *  S  G  L  R  G  S  E  P  D  *  V  W  S  I  W  N  F  C  W  S  L  *  W  S   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06SLm0135H21.1" strand="+"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="43898" stop="44176"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>279</number_coding_nucleotides>
                  <number_encoded_amino_acids>93</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LHVGFLNFDLMNFLPRCLSYSECSGGAGRSEIRGGESSNGGFGKDGLLWFHDIGNCGSGEYSMAIVQANQVLEDQSQIESGPFGTFVGVYDGH</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06SLm0135H21.1" strand="+"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="43675" stop="43923"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>246</number_coding_nucleotides>
                  <number_encoded_amino_acids>82</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LIAADKIKNEAHSISCSSSNQHLPLPSAPLTPKLQSSTYTYLYLTLSIASRKFDSTCKFSILKVGYLFFFELGLAPCGILEF*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="+" PGL_start="44201" PGL_stop="48013"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="44201" e_stop="44231"/>
            <exon e_start="45379" e_stop="45749"/>
            <exon e_start="46324" e_stop="46560"/>
            <exon e_start="47859" e_stop="48013"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.981" acc_prob="0.830" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.977" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.996" e_score="1.000"/>
          <exon-only e_score="0.994"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="44201" e_stop="44231" e_length="31"/>
          </exon>
          <intron i_serial="1" don_prob="0.981" acc_prob="0.830">
            <gDNA_intron_boundary i_start="44232" i_stop="45378" i_length="1147"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="45379" e_stop="45749" e_length="371"/>
          </exon>
          <intron i_serial="2" don_prob="0.995" acc_prob="0.977">
            <gDNA_intron_boundary i_start="45750" i_stop="46323" i_length="574"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="46324" e_stop="46560" e_length="237"/>
          </exon>
          <intron i_serial="3" don_prob="0.998" acc_prob="0.996">
            <gDNA_intron_boundary i_start="46561" i_stop="47858" i_length="1298"/>
          </intron>
          <exon e_serial="4" e_score="0.994">
            <gDNA_exon_boundary e_start="47859" e_stop="48013" e_length="155"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44201" stop="44231"/>
              <exon start="45379" stop="45749"/>
              <exon start="46324" stop="46560"/>
              <exon start="47859" stop="48013"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U331075" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GTTTGTGATCACTTATTTCGACATTTCCAAG : CAATATCAGCTGAAGGAAATGGTGTAGTCACAGAGGAGACAATTCAAAGGGCCTTTCTTGAGACAGAGAGAGGGTTTACTTCTGTTGTTTCGGAAAATTGGCATTCTCGACCACAACTAGCAACAGTGGGGGCATGCTGCCTGGTTGGAGCTATATATCAGCAGACACTCTTTGTAGCAAATCTTGGTGACTCTCGTGTAGTCCTTGGAAAGAAGGTTGGAAACACTGGAGAAATTGCTGCCATGCAGCTATCAACGGAGCATAATGCCAATATTGAGTCTGTTAGGTGGGAGCAAAAAGACTTGCATCCAAATGATCCTCAAATTGTTGTTCTTAGACATGGTGTTTGGAGGGTAAAAGGAATAATTCAG : GTCTCAAGATCCATTGGTGATGTTTATCTTAAACACACAAGATTTTGCAGGGAACCAACAAATGGAAAATTCAGAGTTCCTCAACCCCTTAATATGCCTATCCTGTTGGCCACTCCAACAATTTTAAAACATCCTCTACATCCAAATGACTCCTTCCTCATATTTGCTTCTGATGGTCTATGGGAGCACTTGAGCAATGAAAAGGCCGTTGAAATTGTGAAGAGTCACCCTCGTAAA : GGAAGTGCAAAGAGGCTTGTCAAGGCTGCTCTCCATGTAGCTGCCAAAAAAAGAGAGATGCGATATTCTGATCTTCGAAACATTGACAAAAAGGTCCGACGTCATTTTCACGATGATATAACTGTAATTATTTTATTCTTAAACCATGACCTGAT</gDNA_template>
            <first_frame> V  C  D  H  L  F  R  H  F  Q   : A  I  S  A  E  G  N  G  V  V  T  E  E  T  I  Q  R  A  F  L  E  T  E  R  G  F  T  S  V  V  S  E  N  W  H  S  R  P  Q  L  A  T  V  G  A  C  C  L  V  G  A  I  Y  Q  Q  T  L  F  V  A  N  L  G  D  S  R  V  V  L  G  K  K  V  G  N  T  G  E  I  A  A  M  Q  L  S  T  E  H  N  A  N  I  E  S  V  R  W  E  Q  K  D  L  H  P  N  D  P  Q  I  V  V  L  R  H  G  V  W  R  V  K  G  I  I  Q  :  V  S  R  S  I  G  D  V  Y  L  K  H  T  R  F  C  R  E  P  T  N  G  K  F  R  V  P  Q  P  L  N  M  P  I  L  L  A  T  P  T  I  L  K  H  P  L  H  P  N  D  S  F  L  I  F  A  S  D  G  L  W  E  H  L  S  N  E  K  A  V  E  I  V  K  S  H  P  R  K  :  G  S  A  K  R  L  V  K  A  A  L  H  V  A  A  K  K  R  E  M  R  Y  S  D  L  R  N  I  D  K  K  V  R  R  H  F  H  D  D  I  T  V  I  I  L  F  L  N  H  D  L   </first_frame>
            <second_frame>  F  V  I  T  Y  F  D  I  S  K  :  Q  Y  Q  L  K  E  M  V  *  S  Q  R  R  Q  F  K  G  P  F  L  R  Q  R  E  G  L  L  L  L  F  R  K  I  G  I  L  D  H  N  *  Q  Q  W  G  H  A  A  W  L  E  L  Y  I  S  R  H  S  L  *  Q  I  L  V  T  L  V  *  S  L  E  R  R  L  E  T  L  E  K  L  L  P  C  S  Y  Q  R  S  I  M  P  I  L  S  L  L  G  G  S  K  K  T  C  I  Q  M  I  L  K  L  L  F  L  D  M  V  F  G  G  *  K  E  *  F  R :   S  Q  D  P  L  V  M  F  I  L  N  T  Q  D  F  A  G  N  Q  Q  M  E  N  S  E  F  L  N  P  L  I  C  L  S  C  W  P  L  Q  Q  F  *  N  I  L  Y  I  Q  M  T  P  S  S  Y  L  L  L  M  V  Y  G  S  T  *  A  M  K  R  P  L  K  L  *  R  V  T  L  V  K :   E  V  Q  R  G  L  S  R  L  L  S  M  *  L  P  K  K  E  R  C  D  I  L  I  F  E  T  L  T  K  R  S  D  V  I  F  T  M  I  *  L  *  L  F  Y  S  *  T  M  T  *  </second_frame>
            <third_frame>   L  *  S  L  I  S  T  F  P  S :   N  I  S  *  R  K  W  C  S  H  R  G  D  N  S  K  G  L  S  *  D  R  E  R  V  Y  F  C  C  F  G  K  L  A  F  S  T  T  T  S  N  S  G  G  M  L  P  G  W  S  Y  I  S  A  D  T  L  C  S  K  S  W  *  L  S  C  S  P  W  K  E  G  W  K  H  W  R  N  C  C  H  A  A  I  N  G  A  *  C  Q  Y  *  V  C  *  V  G  A  K  R  L  A  S  K  *  S  S  N  C  C  S  *  T  W  C  L  E  G  K  R  N  N  S   : G  L  K  I  H  W  *  C  L  S  *  T  H  K  I  L  Q  G  T  N  K  W  K  I  Q  S  S  S  T  P  *  Y  A  Y  P  V  G  H  S  N  N  F  K  T  S  S  T  S  K  *  L  L  P  H  I  C  F  *  W  S  M  G  A  L  E  Q  *  K  G  R  *  N  C  E  E  S  P  S  *   : R  K  C  K  E  A  C  Q  G  C  S  P  C  S  C  Q  K  K  R  D  A  I  F  *  S  S  K  H  *  Q  K  G  P  T  S  F  S  R  *  Y  N  C  N  Y  F  I  L  K  P  *  P  D </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06SLm0135H21.1" strand="+"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="44201" stop="44231"/>
                    <exon start="45379" stop="45749"/>
                    <exon start="46324" stop="46560"/>
                    <exon start="47859" stop="48011"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>792</number_coding_nucleotides>
                  <number_encoded_amino_acids>264</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VCDHLFRHFQAISAEGNGVVTEETIQRAFLETERGFTSVVSENWHSRPQLATVGACCLVGAIYQQTLFVANLGDSRVVLGKKVGNTGEIAAMQLSTEHNANIESVRWEQKDLHPNDPQIVVLRHGVWRVKGIIQVSRSIGDVYLKHTRFCREPTNGKFRVPQPLNMPILLATPTILKHPLHPNDSFLIFASDGLWEHLSNEKAVEIVKSHPRKGSAKRLVKAALHVAAKKREMRYSDLRNIDKKVRRHFHDDITVIILFLNHDL</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="-" PGL_start="59251" PGL_stop="57405"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="59251" e_stop="58164"/>
            <exon e_start="57540" e_stop="57405"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.635" acc_prob="0.212" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="59251" e_stop="58164" e_length="1088"/>
          </exon>
          <intron i_serial="1" don_prob="0.635" acc_prob="0.212">
            <gDNA_intron_boundary i_start="58163" i_stop="57541" i_length="623"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="57540" e_stop="57405" e_length="136"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59251" stop="58164"/>
              <exon start="57540" stop="57405"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U321656" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CGGAAGTTAGTGACTACTATGGCAGACAAGATGAGGGAAGAAATTAAGATAGTTCGGACATGTGAAGAGGAGGTGTGCGGATGCACCAATAAAAAGGTGTGAGAGGCTGACTATGAGAACACACCGTTTCTGCGAAGAAGGTATGTAAGACAGAGGTTTCCTAACAAACGATATTCTCCTTCTCTTGATTACTTGTTACTAACAGATTCAGTCAGCTTAGCTGTTTTGATAAGGCAATGCAGGTTGATAGCAAGTTCAAGTGGATTGAGGAAATGATGAAGTGTACTCACTCCACATAAATCAAAGTTGGGGGTTGGTCAAACTACCAGAAGGGAATAAGACAATCCAGAATAATGTATGTACAGGATGAAACAGAAGCATAATAGTTCAATGAAATATAAAGCAAGGTTGGTAATAAAAGGTTTTCAACAAAAGGCATGTATCAATTTACTGAGATTTTCTCCCTTGTGATTAAATTACCTACTATTCGAGTTGCTTTAGAATTGCTGTAGCATAAGATTTATATTTAGAGCATTTAGATGTAAGGACAGCCTCTCTTTATGATGATCAACATGAAAGACGTGTATGCGTAGCAACCTGAAGTGTACATACAGGCTGATAAGAAAAATATGGTGCGTAGACTGAAGAAGAGTCTCTATGGTTTGAAACAAGCACCAAGACCATACTTAAAGTTTGGCAGGTTTATGATGACTATTGGCTTACTTGGTATAATGATGATCACTGTTCTTACTTCAAGAAATTTATAAATTCGTACATCACTTTGCTCCTGTATATGGATGATATGTTGGTGACAGGTTAAAACATGTGTGGGATCACAAAACTGAAGGAGCAAATGTCTAGTGAATTTTTTGATAAAGAATTTGGGACTGGAAATTGAAAGAGACAGGTTGAAGCTGAGTCAGAAGAAATAGATTGAAAAAATAATTCTTAAAGAGGCTAAACATTTGGGATGCCAAGTTGGTGCACTTCAAGAAAATCTGAAAGCAAGTCCTTTGGCAGGTCACTTGAATTGGGATTGTTTTTGGCAAGCGTAGAAGTTAACTTTGTTTGAAAGAAAGAATCTTGAG : ACACAGGTTTCATAGAGGAGCAGATTACAAAGTGTTGCTTTATTGCAGAAGTTGATTTGGTGAGCTCCACCCTTCACCGTGGAATTTCTTCTTTTTTCAGTTAGAATTTTTTTTAATTCAGTTTTTGGGGAATAGC</gDNA_template>
            <first_frame> R  K  L  V  T  T  M  A  D  K  M  R  E  E  I  K  I  V  R  T  C  E  E  E  V  C  G  C  T  N  K  K  V  *  E  A  D  Y  E  N  T  P  F  L  R  R  R  Y  V  R  Q  R  F  P  N  K  R  Y  S  P  S  L  D  Y  L  L  L  T  D  S  V  S  L  A  V  L  I  R  Q  C  R  L  I  A  S  S  S  G  L  R  K  *  *  S  V  L  T  P  H  K  S  K  L  G  V  G  Q  T  T  R  R  E  *  D  N  P  E  *  C  M  Y  R  M  K  Q  K  H  N  S  S  M  K  Y  K  A  R  L  V  I  K  G  F  Q  Q  K  A  C  I  N  L  L  R  F  S  P  L  *  L  N  Y  L  L  F  E  L  L  *  N  C  C  S  I  R  F  I  F  R  A  F  R  C  K  D  S  L  S  L  *  *  S  T  *  K  T  C  M  R  S  N  L  K  C  T  Y  R  L  I  R  K  I  W  C  V  D  *  R  R  V  S  M  V  *  N  K  H  Q  D  H  T  *  S  L  A  G  L  *  *  L  L  A  Y  L  V  *  *  *  S  L  F  L  L  Q  E  I  Y  K  F  V  H  H  F  A  P  V  Y  G  *  Y  V  G  D  R  L  K  H  V  W  D  H  K  T  E  G  A  N  V  *  *  I  F  *  *  R  I  W  D  W  K  L  K  E  T  G  *  S  *  V  R  R  N  R  L  K  K  *  F  L  K  R  L  N  I  W  D  A  K  L  V  H  F  K  K  I  *  K  Q  V  L  W  Q  V  T  *  I  G  I  V  F  G  K  R  R  S  *  L  C  L  K  E  R  I  L  R :   H  R  F  H  R  G  A  D  Y  K  V  L  L  Y  C  R  S  *  F  G  E  L  H  P  S  P  W  N  F  F  F  F  Q  L  E  F  F  L  I  Q  F  L  G  N  S </first_frame>
            <second_frame>  G  S  *  *  L  L  W  Q  T  R  *  G  K  K  L  R  *  F  G  H  V  K  R  R  C  A  D  A  P  I  K  R  C  E  R  L  T  M  R  T  H  R  F  C  E  E  G  M  *  D  R  G  F  L  T  N  D  I  L  L  L  L  I  T  C  Y  *  Q  I  Q  S  A  *  L  F  *  *  G  N  A  G  *  *  Q  V  Q  V  D  *  G  N  D  E  V  Y  S  L  H  I  N  Q  S  W  G  L  V  K  L  P  E  G  N  K  T  I  Q  N  N  V  C  T  G  *  N  R  S  I  I  V  Q  *  N  I  K  Q  G  W  *  *  K  V  F  N  K  R  H  V  S  I  Y  *  D  F  L  P  C  D  *  I  T  Y  Y  S  S  C  F  R  I  A  V  A  *  D  L  Y  L  E  H  L  D  V  R  T  A  S  L  Y  D  D  Q  H  E  R  R  V  C  V  A  T  *  S  V  H  T  G  *  *  E  K  Y  G  A  *  T  E  E  E  S  L  W  F  E  T  S  T  K  T  I  L  K  V  W  Q  V  Y  D  D  Y  W  L  T  W  Y  N  D  D  H  C  S  Y  F  K  K  F  I  N  S  Y  I  T  L  L  L  Y  M  D  D  M  L  V  T  G  *  N  M  C  G  I  T  K  L  K  E  Q  M  S  S  E  F  F  D  K  E  F  G  T  G  N  *  K  R  Q  V  E  A  E  S  E  E  I  D  *  K  N  N  S  *  R  G  *  T  F  G  M  P  S  W  C  T  S  R  K  S  E  S  K  S  F  G  R  S  L  E  L  G  L  F  L  A  S  V  E  V  N  F  V  *  K  K  E  S  *   : D  T  G  F  I  E  E  Q  I  T  K  C  C  F  I  A  E  V  D  L  V  S  S  T  L  H  R  G  I  S  S  F  F  S  *  N  F  F  *  F  S  F  W  G  I   </second_frame>
            <third_frame>   E  V  S  D  Y  Y  G  R  Q  D  E  G  R  N  *  D  S  S  D  M  *  R  G  G  V  R  M  H  Q  *  K  G  V  R  G  *  L  *  E  H  T  V  S  A  K  K  V  C  K  T  E  V  S  *  Q  T  I  F  S  F  S  *  L  L  V  T  N  R  F  S  Q  L  S  C  F  D  K  A  M  Q  V  D  S  K  F  K  W  I  E  E  M  M  K  C  T  H  S  T  *  I  K  V  G  G  W  S  N  Y  Q  K  G  I  R  Q  S  R  I  M  Y  V  Q  D  E  T  E  A  *  *  F  N  E  I  *  S  K  V  G  N  K  R  F  S  T  K  G  M  Y  Q  F  T  E  I  F  S  L  V  I  K  L  P  T  I  R  V  A  L  E  L  L  *  H  K  I  Y  I  *  S  I  *  M  *  G  Q  P  L  F  M  M  I  N  M  K  D  V  Y  A  *  Q  P  E  V  Y  I  Q  A  D  K  K  N  M  V  R  R  L  K  K  S  L  Y  G  L  K  Q  A  P  R  P  Y  L  K  F  G  R  F  M  M  T  I  G  L  L  G  I  M  M  I  T  V  L  T  S  R  N  L  *  I  R  T  S  L  C  S  C  I  W  M  I  C  W  *  Q  V  K  T  C  V  G  S  Q  N  *  R  S  K  C  L  V  N  F  L  I  K  N  L  G  L  E  I  E  R  D  R  L  K  L  S  Q  K  K  *  I  E  K  I  I  L  K  E  A  K  H  L  G  C  Q  V  G  A  L  Q  E  N  L  K  A  S  P  L  A  G  H  L  N  W  D  C  F  W  Q  A  *  K  L  T  L  F  E  R  K  N  L  E  :  T  Q  V  S  *  R  S  R  L  Q  S  V  A  L  L  Q  K  L  I  W  *  A  P  P  F  T  V  E  F  L  L  F  S  V  R  I  F  F  N  S  V  F  G  E  *  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C06SLm0135H21.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="+" PGL_start="57813" PGL_stop="58154"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="57813" e_stop="57956"/>
            <exon e_start="58007" e_stop="58154"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.896"/>
          <exon-only e_score="0.926"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.896">
            <gDNA_exon_boundary e_start="57813" e_stop="57956" e_length="144"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="57957" i_stop="58006" i_length="50"/>
          </intron>
          <exon e_serial="2" e_score="0.926">
            <gDNA_exon_boundary e_start="58007" e_stop="58154" e_length="148"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="57813" stop="57956"/>
              <exon start="58007" stop="58154"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U341207" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TCATAACCATGCATAAGAGAGTACATTATGGCTGTTGTCACTATGAAAGACGACACAATTCTTGATGGGATATGTTGTCTTTTCTTGGTCATCTTTCCAGGGAATTAGGTACTGTTTTAGGGCTGAAAAGAGTTACCACAAAGC : AAAATAGAGCACGAGAAAGACTCATTCAATGATGCGCAATGTGAGCTCACTCATTCCAGTTTAGCTCACATTAATACTTTAGAAACATTAATTCAAATAACTTATGGGACATGATCTCTTCAGGAAAGAACTTTAGTAAGAACAAGTC</gDNA_template>
            <first_frame> S  *  P  C  I  R  E  Y  I  M  A  V  V  T  M  K  D  D  T  I  L  D  G  I  C  C  L  F  L  V  I  F  P  G  N  *  V  L  F  *  G  *  K  E  L  P  Q  S  :  K  I  E  H  E  K  D  S  F  N  D  A  Q  C  E  L  T  H  S  S  L  A  H  I  N  T  L  E  T  L  I  Q  I  T  Y  G  T  *  S  L  Q  E  R  T  L  V  R  T  S  </first_frame>
            <second_frame>  H  N  H  A  *  E  S  T  L  W  L  L  S  L  *  K  T  T  Q  F  L  M  G  Y  V  V  F  S  W  S  S  F  Q  G  I  R  Y  C  F  R  A  E  K  S  Y  H  K  A :   K  *  S  T  R  K  T  H  S  M  M  R  N  V  S  S  L  I  P  V  *  L  T  L  I  L  *  K  H  *  F  K  *  L  M  G  H  D  L  F  R  K  E  L  *  *  E  Q  V </second_frame>
            <third_frame>   I  T  M  H  K  R  V  H  Y  G  C  C  H  Y  E  R  R  H  N  S  *  W  D  M  L  S  F  L  G  H  L  S  R  E  L  G  T  V  L  G  L  K  R  V  T  T  K   : Q  N  R  A  R  E  R  L  I  Q  *  C  A  M  *  A  H  S  F  Q  F  S  S  H  *  Y  F  R  N  I  N  S  N  N  L  W  D  M  I  S  S  G  K  N  F  S  K  N  K   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C06SLm0135H21.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="-" PGL_start="62201" PGL_stop="61216"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="62201" e_stop="61216"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.991"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.991">
            <gDNA_exon_boundary e_start="62201" e_stop="61216" e_length="986"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62201" stop="61216"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U318926" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ATCTTCTCCCACCTATAAATTTACCCTTCGACACTCGCTAGGTTTGCCAAACTGAAAAGCCTTAGGGCACTTTTTAAGAGATCTATACAAACAGAAATTGTTTATATAGATCTTCACTGAAAATGGCGAATTCCTCTAGAAGGCCGAGTGGGCCAGTGTTGCTTAAATCGGCGTTTGAGAGGTCAATCTCACCTACCGGCAGGTTCTGTAACACCACCACCACAGCAACTGATGCGATGTCGTTCGCTTCGTACAGCAACTCTAGCTTTTATTCCTCTCCGTCGACCGGCTGTTTCAACCGATCGGCTTCTCCGACGCGCGTGAATCTTCACGCTCTGGCGCCGGTGAATTCTTCGCCTAGCGTTAGGTTCTCCATTGACAGATCCATTTCTCCTCGGCGTTCCATGGCGGTGTCTCAACGTGATCAGGTGGTTCGGAAGCAGATCCCGAAGAGGACGTGCTTATGCTCACCTACGACGCATCCTGGTTCGTTCAGGTGTAGTATGCATAAGAATGTGAAGAATACTCCTTCGATTTCGTATTCCCCTAGCCGATTGAATGCACGGAGATCGGCGATGACAAATTCACTGGTGCGTATCTGTTCTGTTGAAGGTGATTTAGTGAAACGAGCTTTGGCTGCTCTTATTAGGCCATCGTCGCATCATCAGAGACGTCGAGGTGACTTTCAACCGCGTCCTAGCCGGCTTTCCAGAATGTCCAAAGCTGATAACCTGTGAAATTTCCGTGGTAACAGGTTGGTGATTTTCATATATTAACTGAGGCTCATCTCTTGAGAGTTTTCCGGCGGCGGCGTCTGATCCTGGCTGCGGTTCTTACTACTCCGGTGAAATGAAAGCTGTAGGGCAATTTTGATGCAGTATGGAAGTAGTAGAATTCTCCCTTGTACATATGGTTTTGTTGCAGTAACTGATTGCAATTGAAAGGACAATTTGGACTTTTAAAATCTAATTAAACCGATTAAAATT</gDNA_template>
            <first_frame> I  F  S  H  L  *  I  Y  P  S  T  L  A  R  F  A  K  L  K  S  L  R  A  L  F  K  R  S  I  Q  T  E  I  V  Y  I  D  L  H  *  K  W  R  I  P  L  E  G  R  V  G  Q  C  C  L  N  R  R  L  R  G  Q  S  H  L  P  A  G  S  V  T  P  P  P  Q  Q  L  M  R  C  R  S  L  R  T  A  T  L  A  F  I  P  L  R  R  P  A  V  S  T  D  R  L  L  R  R  A  *  I  F  T  L  W  R  R  *  I  L  R  L  A  L  G  S  P  L  T  D  P  F  L  L  G  V  P  W  R  C  L  N  V  I  R  W  F  G  S  R  S  R  R  G  R  A  Y  A  H  L  R  R  I  L  V  R  S  G  V  V  C  I  R  M  *  R  I  L  L  R  F  R  I  P  L  A  D  *  M  H  G  D  R  R  *  Q  I  H  W  C  V  S  V  L  L  K  V  I  *  *  N  E  L  W  L  L  L  L  G  H  R  R  I  I  R  D  V  E  V  T  F  N  R  V  L  A  G  F  P  E  C  P  K  L  I  T  C  E  I  S  V  V  T  G  W  *  F  S  Y  I  N  *  G  S  S  L  E  S  F  P  A  A  A  S  D  P  G  C  G  S  Y  Y  S  G  E  M  K  A  V  G  Q  F  *  C  S  M  E  V  V  E  F  S  L  V  H  M  V  L  L  Q  *  L  I  A  I  E  R  T  I  W  T  F  K  I  *  L  N  R  L  K   </first_frame>
            <second_frame>  S  S  P  T  Y  K  F  T  L  R  H  S  L  G  L  P  N  *  K  A  L  G  H  F  L  R  D  L  Y  K  Q  K  L  F  I  *  I  F  T  E  N  G  E  F  L  *  K  A  E  W  A  S  V  A  *  I  G  V  *  E  V  N  L  T  Y  R  Q  V  L  *  H  H  H  H  S  N  *  C  D  V  V  R  F  V  Q  Q  L  *  L  L  F  L  S  V  D  R  L  F  Q  P  I  G  F  S  D  A  R  E  S  S  R  S  G  A  G  E  F  F  A  *  R  *  V  L  H  *  Q  I  H  F  S  S  A  F  H  G  G  V  S  T  *  S  G  G  S  E  A  D  P  E  E  D  V  L  M  L  T  Y  D  A  S  W  F  V  Q  V  *  Y  A  *  E  C  E  E  Y  S  F  D  F  V  F  P  *  P  I  E  C  T  E  I  G  D  D  K  F  T  G  A  Y  L  F  C  *  R  *  F  S  E  T  S  F  G  C  S  Y  *  A  I  V  A  S  S  E  T  S  R  *  L  S  T  A  S  *  P  A  F  Q  N  V  Q  S  *  *  P  V  K  F  P  W  *  Q  V  G  D  F  H  I  L  T  E  A  H  L  L  R  V  F  R  R  R  R  L  I  L  A  A  V  L  T  T  P  V  K  *  K  L  *  G  N  F  D  A  V  W  K  *  *  N  S  P  L  Y  I  W  F  C  C  S  N  *  L  Q  L  K  G  Q  F  G  L  L  K  S  N  *  T  D  *  N  </second_frame>
            <third_frame>   L  L  P  P  I  N  L  P  F  D  T  R  *  V  C  Q  T  E  K  P  *  G  T  F  *  E  I  Y  T  N  R  N  C  L  Y  R  S  S  L  K  M  A  N  S  S  R  R  P  S  G  P  V  L  L  K  S  A  F  E  R  S  I  S  P  T  G  R  F  C  N  T  T  T  T  A  T  D  A  M  S  F  A  S  Y  S  N  S  S  F  Y  S  S  P  S  T  G  C  F  N  R  S  A  S  P  T  R  V  N  L  H  A  L  A  P  V  N  S  S  P  S  V  R  F  S  I  D  R  S  I  S  P  R  R  S  M  A  V  S  Q  R  D  Q  V  V  R  K  Q  I  P  K  R  T  C  L  C  S  P  T  T  H  P  G  S  F  R  C  S  M  H  K  N  V  K  N  T  P  S  I  S  Y  S  P  S  R  L  N  A  R  R  S  A  M  T  N  S  L  V  R  I  C  S  V  E  G  D  L  V  K  R  A  L  A  A  L  I  R  P  S  S  H  H  Q  R  R  R  G  D  F  Q  P  R  P  S  R  L  S  R  M  S  K  A  D  N  L  *  N  F  R  G  N  R  L  V  I  F  I  Y  *  L  R  L  I  S  *  E  F  S  G  G  G  V  *  S  W  L  R  F  L  L  L  R  *  N  E  S  C  R  A  I  L  M  Q  Y  G  S  S  R  I  L  P  C  T  Y  G  F  V  A  V  T  D  C  N  *  K  D  N  L  D  F  *  N  L  I  K  P  I  K  I </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06SLm0135H21.1" strand="-"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="62124" stop="61465"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>657</number_coding_nucleotides>
                  <number_encoded_amino_acids>219</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EIYTNRNCLYRSSLKMANSSRRPSGPVLLKSAFERSISPTGRFCNTTTTATDAMSFASYSNSSFYSSPSTGCFNRSASPTRVNLHALAPVNSSPSVRFSIDRSISPRRSMAVSQRDQVVRKQIPKRTCLCSPTTHPGSFRCSMHKNVKNTPSISYSPSRLNARRSAMTNSLVRICSVEGDLVKRALAALIRPSSHHQRRRGDFQPRPSRLSRMSKADNL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="+" PGL_start="64119" PGL_stop="77664"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="64119" e_stop="64232"/>
            <exon e_start="64471" e_stop="64479"/>
            <exon e_start="68623" e_stop="68647"/>
            <exon e_start="69875" e_stop="69882"/>
            <exon e_start="70116" e_stop="70139"/>
            <exon e_start="70539" e_stop="70594"/>
            <exon e_start="71907" e_stop="72027"/>
            <exon e_start="72300" e_stop="72438"/>
            <exon e_start="76103" e_stop="76359"/>
            <exon e_start="77003" e_stop="77090"/>
            <exon e_start="77315" e_stop="77381"/>
            <exon e_start="77466" e_stop="77664"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.907" acc_prob="0.929" e_score="0.545"/>
          <exon-intron don_prob="0.900" acc_prob="0.592" e_score="0.556"/>
          <exon-intron don_prob="0.762" acc_prob="0.000" e_score="0.720"/>
          <exon-intron don_prob="0.143" acc_prob="0.667" e_score="0.875"/>
          <exon-intron don_prob="0.581" acc_prob="0.000" e_score="0.625"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.589"/>
          <exon-intron don_prob="0.999" acc_prob="0.980" e_score="0.917"/>
          <exon-intron don_prob="0.975" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.996" e_score="0.988"/>
          <exon-intron don_prob="1.000" acc_prob="0.919" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.995" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.545">
            <gDNA_exon_boundary e_start="64119" e_stop="64232" e_length="114"/>
          </exon>
          <intron i_serial="1" don_prob="0.907" acc_prob="0.929">
            <gDNA_intron_boundary i_start="64233" i_stop="64470" i_length="238"/>
          </intron>
          <exon e_serial="2" e_score="0.556">
            <gDNA_exon_boundary e_start="64471" e_stop="64479" e_length="9"/>
          </exon>
          <intron i_serial="2" don_prob="0.900" acc_prob="0.592">
            <gDNA_intron_boundary i_start="64480" i_stop="68622" i_length="4143"/>
          </intron>
          <exon e_serial="3" e_score="0.720">
            <gDNA_exon_boundary e_start="68623" e_stop="68647" e_length="25"/>
          </exon>
          <intron i_serial="3" don_prob="0.762" acc_prob="0.000">
            <gDNA_intron_boundary i_start="68648" i_stop="69874" i_length="1227"/>
          </intron>
          <exon e_serial="4" e_score="0.875">
            <gDNA_exon_boundary e_start="69875" e_stop="69882" e_length="8"/>
          </exon>
          <intron i_serial="4" don_prob="0.143" acc_prob="0.667">
            <gDNA_intron_boundary i_start="69883" i_stop="70115" i_length="233"/>
          </intron>
          <exon e_serial="5" e_score="0.625">
            <gDNA_exon_boundary e_start="70116" e_stop="70139" e_length="24"/>
          </exon>
          <intron i_serial="5" don_prob="0.581" acc_prob="0.000">
            <gDNA_intron_boundary i_start="70140" i_stop="70538" i_length="399"/>
          </intron>
          <exon e_serial="6" e_score="0.589">
            <gDNA_exon_boundary e_start="70539" e_stop="70594" e_length="56"/>
          </exon>
          <intron i_serial="6" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="70595" i_stop="71906" i_length="1312"/>
          </intron>
          <exon e_serial="7" e_score="0.917">
            <gDNA_exon_boundary e_start="71907" e_stop="72027" e_length="121"/>
          </exon>
          <intron i_serial="7" don_prob="0.999" acc_prob="0.980">
            <gDNA_intron_boundary i_start="72028" i_stop="72299" i_length="272"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="72300" e_stop="72438" e_length="139"/>
          </exon>
          <intron i_serial="8" don_prob="0.975" acc_prob="0.000">
            <gDNA_intron_boundary i_start="72439" i_stop="76102" i_length="3664"/>
          </intron>
          <exon e_serial="9" e_score="0.988">
            <gDNA_exon_boundary e_start="76103" e_stop="76359" e_length="257"/>
          </exon>
          <intron i_serial="9" don_prob="0.996" acc_prob="0.996">
            <gDNA_intron_boundary i_start="76360" i_stop="77002" i_length="643"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="77003" e_stop="77090" e_length="88"/>
          </exon>
          <intron i_serial="10" don_prob="1.000" acc_prob="0.919">
            <gDNA_intron_boundary i_start="77091" i_stop="77314" i_length="224"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="77315" e_stop="77381" e_length="67"/>
          </exon>
          <intron i_serial="11" don_prob="1.000" acc_prob="0.995">
            <gDNA_intron_boundary i_start="77382" i_stop="77465" i_length="84"/>
          </intron>
          <exon e_serial="12" e_score="1.000">
            <gDNA_exon_boundary e_start="77466" e_stop="77664" e_length="199"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64119" stop="64232"/>
              <exon start="64471" stop="64479"/>
              <exon start="68623" stop="68647"/>
              <exon start="69875" stop="69882"/>
              <exon start="70116" stop="70139"/>
              <exon start="70539" stop="70594"/>
              <exon start="71907" stop="72027"/>
              <exon start="72300" stop="72438"/>
              <exon start="76103" stop="76359"/>
              <exon start="77003" stop="77090"/>
              <exon start="77315" stop="77381"/>
              <exon start="77466" stop="77664"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U323857" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATCCGACCTAGATAATCCCAC : ACTGGACGG : TGTGATGATTTACCCAAAAAAAGAG : TTCAGAAG : GGAAAAAAGATTTGACTACAACAA : TTATTATTTAGTGTGGTCAAGTACATACAATTATTTAGTGTAGTTAAGTACATACA : ATATCTGCAAATCTAGCAAACCCACCAGGAATTTCTCTGATTCTTTAAGATTTTCAGCGCTTATTCACCAACCCAAAGATCAACAACAAAATCTCATCCCGCAACTACGCTTTTTTCACAG : GTGGGGGGATGTGTTTTTTTTTTCTGTATTGGAGGTCCAGAGGGTTGAAATCTGTGCTTTGACGAAAACCCATTTGCTTGTAAATGCAACTTTGTAGATCAATTGCCTCTTGGATATACCGCATATTGGCTTGCATGGG : AAGTTGTCTTGGATGCTGTGTGAATTCTCCTCATGTTGTTTCAGTGGATAAGCCATCTAAAGGACTGAAAGTTCCGAGCAAACGATTGAGGAAAACTAGTTTAAGAGACGACTTTTGGAGCAGTAGTGCATGCGAGATGGAGAATAGCACATTTCCCTCCCAGAGAAGCATCTCATCAATTAGCACATCTAATCCGGCCCTTGATCCTCACAGTAATTCTGGCACCACGAGCAGCACTTCGGAATTTGTAAATCATG : GTCTACTTCTTTGGAATCAAACGAGGCAACAATGGTGTGGAAATAAAACACCACAGAAGGGTGCCTCAGTTCGAGAACCCAAATTAAG : TTCGGATACAAATTATGTAACGTTGCTAGGGACTAATAAGCTTTTCCCTCAGCCAATCCCTCTACCG : GAAATGGTAGACTTTCTTGTTGATGTGTGGGAGCAGGAGGGGCTTTATGATTAAGCAGCCACATAACTCATCATTCTCAGCAACTGCAAATTGTGTTTCTGCAAGTTTTTATCACATTAATTGGATGTTTTATAAGGACTTCTAAAATATTAAAATAAAAAATGATATCCAAAAGTTAAATGAAGATATTTTAATTTTT</gDNA_template>
            <first_frame> F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  L  I  R  P  R  *  S  H  :  T  G  R  :  C  D  D  L  P  K  K  R   : V  Q  K  :  G  K  K  I  *  L  Q  Q  :  L  L  F  S  V  V  K  Y  I  Q  L  F  S  V  V  K  Y  I  Q :   Y  L  Q  I  *  Q  T  H  Q  E  F  L  *  F  F  K  I  F  S  A  Y  S  P  T  Q  R  S  T  T  K  S  H  P  A  T  T  L  F  S  Q  :  V  G  G  C  V  F  F  F  C  I  G  G  P  E  G  *  N  L  C  F  D  E  N  P  F  A  C  K  C  N  F  V  D  Q  L  P  L  G  Y  T  A  Y  W  L  A  W   : E  V  V  L  D  A  V  *  I  L  L  M  L  F  Q  W  I  S  H  L  K  D  *  K  F  R  A  N  D  *  G  K  L  V  *  E  T  T  F  G  A  V  V  H  A  R  W  R  I  A  H  F  P  P  R  E  A  S  H  Q  L  A  H  L  I  R  P  L  I  L  T  V  I  L  A  P  R  A  A  L  R  N  L  *  I  M  :  V  Y  F  F  G  I  K  R  G  N  N  G  V  E  I  K  H  H  R  R  V  P  Q  F  E  N  P  N  *   : V  R  I  Q  I  M  *  R  C  *  G  L  I  S  F  S  L  S  Q  S  L  Y  R :   K  W  *  T  F  L  L  M  C  G  S  R  R  G  F  M  I  K  Q  P  H  N  S  S  F  S  A  T  A  N  C  V  S  A  S  F  Y  H  I  N  W  M  F  Y  K  D  F  *  N  I  K  I  K  N  D  I  Q  K  L  N  E  D  I  L  I  F </first_frame>
            <second_frame>  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  *  S  D  L  D  N  P  T :   L  D  G :   V  M  I  Y  P  K  K  E  :  F  R  R :   E  K  R  F  D  Y  N  N :   Y  Y  L  V  W  S  S  T  Y  N  Y  L  V  *  L  S  T  Y   : N  I  C  K  S  S  K  P  T  R  N  F  S  D  S  L  R  F  S  A  L  I  H  Q  P  K  D  Q  Q  Q  N  L  I  P  Q  L  R  F  F  H  R :   W  G  D  V  F  F  F  S  V  L  E  V  Q  R  V  E  I  C  A  L  T  K  T  H  L  L  V  N  A  T  L  *  I  N  C  L  L  D  I  P  H  I  G  L  H  G  :  K  L  S  W  M  L  C  E  F  S  S  C  C  F  S  G  *  A  I  *  R  T  E  S  S  E  Q  T  I  E  E  N  *  F  K  R  R  L  L  E  Q  *  C  M  R  D  G  E  *  H  I  S  L  P  E  K  H  L  I  N  *  H  I  *  S  G  P  *  S  S  Q  *  F  W  H  H  E  Q  H  F  G  I  C  K  S  W :   S  T  S  L  E  S  N  E  A  T  M  V  W  K  *  N  T  T  E  G  C  L  S  S  R  T  Q  I  K  :  F  G  Y  K  L  C  N  V  A  R  D  *  *  A  F  P  S  A  N  P  S  T   : G  N  G  R  L  S  C  *  C  V  G  A  G  G  A  L  *  L  S  S  H  I  T  H  H  S  Q  Q  L  Q  I  V  F  L  Q  V  F  I  T  L  I  G  C  F  I  R  T  S  K  I  L  K  *  K  M  I  S  K  S  *  M  K  I  F  *  F   </second_frame>
            <third_frame>   F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  D  P  T  *  I  I  P   : H  W  T   : V  *  *  F  T  Q  K  K  S :   S  E   : G  K  K  D  L  T  T  T   : I  I  I  *  C  G  Q  V  H  T  I  I  *  C  S  *  V  H  T  :  I  S  A  N  L  A  N  P  P  G  I  S  L  I  L  *  D  F  Q  R  L  F  T  N  P  K  I  N  N  K  I  S  S  R  N  Y  A  F  F  T   : G  G  G  M  C  F  F  F  L  Y  W  R  S  R  G  L  K  S  V  L  *  R  K  P  I  C  L  *  M  Q  L  C  R  S  I  A  S  W  I  Y  R  I  L  A  C  M  G :   S  C  L  G  C  C  V  N  S  P  H  V  V  S  V  D  K  P  S  K  G  L  K  V  P  S  K  R  L  R  K  T  S  L  R  D  D  F  W  S  S  S  A  C  E  M  E  N  S  T  F  P  S  Q  R  S  I  S  S  I  S  T  S  N  P  A  L  D  P  H  S  N  S  G  T  T  S  S  T  S  E  F  V  N  H   : G  L  L  L  W  N  Q  T  R  Q  Q  W  C  G  N  K  T  P  Q  K  G  A  S  V  R  E  P  K  L  S :   S  D  T  N  Y  V  T  L  L  G  T  N  K  L  F  P  Q  P  I  P  L  P  :  E  M  V  D  F  L  V  D  V  W  E  Q  E  G  L  Y  D  *  A  A  T  *  L  I  I  L  S  N  C  K  L  C  F  C  K  F  L  S  H  *  L  D  V  L  *  G  L  L  K  Y  *  N  K  K  *  Y  P  K  V  K  *  R  Y  F  N  F  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06SLm0135H21.1" strand="+"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="72383" stop="72438"/>
                    <exon start="76103" stop="76359"/>
                    <exon start="77003" stop="77090"/>
                    <exon start="77315" stop="77381"/>
                    <exon start="77466" stop="77519"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>519</number_coding_nucleotides>
                  <number_encoded_amino_acids>173</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>MQLCRSIASWIYRILACMGSCLGCCVNSPHVVSVDKPSKGLKVPSKRLRKTSLRDDFWSSSACEMENSTFPSQRSISSISTSNPALDPHSNSGTTSSTSEFVNHGLLLWNQTRQQWCGNKTPQKGASVREPKLSSDTNYVTLLGTNKLFPQPIPLPEMVDFLVDVWEQEGLYD*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06SLm0135H21.1" strand="+"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="70582" stop="70594"/>
                    <exon start="71907" stop="72027"/>
                    <exon start="72300" stop="72396"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>228</number_coding_nucleotides>
                  <number_encoded_amino_acids>76</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LSTYNICKSSKPTRNFSDSLRFSALIHQPKDQQQNLIPQLRFFHRWGDVFFFSVLEVQRVEICALTKTHLLVNATL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="13" PGL_strand="-" PGL_start="91121" PGL_stop="86435"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="91121" e_stop="91030"/>
            <exon e_start="90899" e_stop="90835"/>
            <exon e_start="90691" e_stop="90620"/>
            <exon e_start="90519" e_stop="90417"/>
            <exon e_start="90320" e_stop="90249"/>
            <exon e_start="90145" e_stop="90035"/>
            <exon e_start="87322" e_stop="86435"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.939" acc_prob="0.996" e_score="0.989"/>
          <exon-intron don_prob="0.984" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.960" acc_prob="0.797" e_score="1.000"/>
          <exon-intron don_prob="0.986" acc_prob="0.982" e_score="1.000"/>
          <exon-intron don_prob="0.972" acc_prob="0.989" e_score="1.000"/>
          <exon-intron don_prob="0.993" acc_prob="0.969" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.989">
            <gDNA_exon_boundary e_start="91121" e_stop="91030" e_length="92"/>
          </exon>
          <intron i_serial="1" don_prob="0.939" acc_prob="0.996">
            <gDNA_intron_boundary i_start="91029" i_stop="90900" i_length="130"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="90899" e_stop="90835" e_length="65"/>
          </exon>
          <intron i_serial="2" don_prob="0.984" acc_prob="1.000">
            <gDNA_intron_boundary i_start="90834" i_stop="90692" i_length="143"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="90691" e_stop="90620" e_length="72"/>
          </exon>
          <intron i_serial="3" don_prob="0.960" acc_prob="0.797">
            <gDNA_intron_boundary i_start="90619" i_stop="90520" i_length="100"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="90519" e_stop="90417" e_length="103"/>
          </exon>
          <intron i_serial="4" don_prob="0.986" acc_prob="0.982">
            <gDNA_intron_boundary i_start="90416" i_stop="90321" i_length="96"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="90320" e_stop="90249" e_length="72"/>
          </exon>
          <intron i_serial="5" don_prob="0.972" acc_prob="0.989">
            <gDNA_intron_boundary i_start="90248" i_stop="90146" i_length="103"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="90145" e_stop="90035" e_length="111"/>
          </exon>
          <intron i_serial="6" don_prob="0.993" acc_prob="0.969">
            <gDNA_intron_boundary i_start="90034" i_stop="87323" i_length="2712"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="87322" e_stop="86435" e_length="888"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="91121" stop="91030"/>
              <exon start="90899" stop="90835"/>
              <exon start="90691" stop="90620"/>
              <exon start="90519" stop="90417"/>
              <exon start="90320" stop="90249"/>
              <exon start="90145" stop="90035"/>
              <exon start="87322" stop="86435"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U321118" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTGATGCAAAGGGTAAATCATTCAGTGACAAGAAAACTGTTGAGTATTATTCAAAACCTGCATTGGCTCATCTAAATGTTGATCGTGCTAAG : CAACCTGGTCATGCTGAAGTAGCAGCATCAGCTTCTCCCAGTGCTGCTCAGTCGGAAGGCCTTAA : GGAAAAAACAAAACTGATGCCTTTGAAGAAAGTGCCCCCTGCTAAAGCTGATGGAAGTGCAGAATCATCTTC : CAGTCCTACTGCTGCATCAGATGCCAAACCTCGCAAAGTAGGTACTCTTCCAACCTACAATATCAGTTTCAAGTGTGATGCAAGAGCTGAGAAAAGGAAAGAG : TTTTACTCCAAGCTTGAAGAAAAAACCCAGGCAAAGGAAGTTGAGAAGAGTAATATGCAAGCCAAGACTAAG : GAAACTCAGGAAGCTGAGATCAAAATGTTAAGGAAGAGCTTAAAATTTAAAGCGACACCCATGCCAAGCTTTTATCAGGAACCTGCACCTCCAAAGATGGAGTTGAAGAAG : ATTCCACCAACCAGAGCTAAATCCCCCAAACTTGGGAGGAGAAAGAGCTCGCCCACCAAAGAAAGAATCAATGAGAGTGTCATGCGCCCGGGTAGGTTAAGCTTGGACGAAAATGCATCCCAAAATAACCCAGTCAAAGGGCATTCTCCTCTCATTGTTAAGAAGCCTCAAAGGAAGTCACTTCCAAAGCTGCCATCTGAGAAAACCAACTTATCCAATGAAACAAGAAAGCTTTCCATTCGCAAGTCTAGCTCATCCAAAGAATCAGCTGAAGCTGCATCTCTGCCGAATGCTTTACCCAAGGAAACAAGTGAAGTTTCTTCTCAACCAAATAACCAACACAAGCAAGCTACTGAATTTGATGCAGATGGTCGAGAGTGTGAGGTTGTATCAGTTGTTGAACCGAGCCAGACTGAGACCGGTGTTAAAGCTCAAATAGAGACCAATCTGGTGCAGGAACATGTCACAATCGAGCAGTAGAAGCAACCACTGAAGTTGAATATATACTCATGGAGCAATCTTCATTTGCTCTTTGCCTCAAGTATTGCAAAGGTATGAATGCACTTGATATTGTACTAGGCAAACATCGCCATTTTGTCTATAGTCAGCGCAGCAAGGTTGAATTTGTAGTGGTCTATCTTCTTTCAAGATTGCTGAGTGTGGTCATCAGAAACATGCAGGCTGCTTGCCTCTGTTATCTAAATGTTGAGTAGCCAGAAATCCTTAAGAATTTTTGTCTTTTCTACTAGTCGAGTACTTTGCAGTTGCAGAAAACTTGAGACAGTACTGGCTGCTGAAACTGTTCTGTTGAACCAAATGGTTGTTGCTTGTTTATTAAGGTGTATTTATAAATTACATATACATTACATGATGGAGAGCTTTGTTCAG</gDNA_template>
            <first_frame> L  M  Q  R  V  N  H  S  V  T  R  K  L  L  S  I  I  Q  N  L  H  W  L  I  *  M  L  I  V  L  S :   N  L  V  M  L  K  *  Q  H  Q  L  L  P  V  L  L  S  R  K  A  L   : R  K  K  Q  N  *  C  L  *  R  K  C  P  L  L  K  L  M  E  V  Q  N  H  L   : P  V  L  L  L  H  Q  M  P  N  L  A  K  *  V  L  F  Q  P  T  I  S  V  S  S  V  M  Q  E  L  R  K  G  K  S :   F  T  P  S  L  K  K  K  P  R  Q  R  K  L  R  R  V  I  C  K  P  R  L  R :   K  L  R  K  L  R  S  K  C  *  G  R  A  *  N  L  K  R  H  P  C  Q  A  F  I  R  N  L  H  L  Q  R  W  S  *  R  R :   F  H  Q  P  E  L  N  P  P  N  L  G  G  E  R  A  R  P  P  K  K  E  S  M  R  V  S  C  A  R  V  G  *  A  W  T  K  M  H  P  K  I  T  Q  S  K  G  I  L  L  S  L  L  R  S  L  K  G  S  H  F  Q  S  C  H  L  R  K  P  T  Y  P  M  K  Q  E  S  F  P  F  A  S  L  A  H  P  K  N  Q  L  K  L  H  L  C  R  M  L  Y  P  R  K  Q  V  K  F  L  L  N  Q  I  T  N  T  S  K  L  L  N  L  M  Q  M  V  E  S  V  R  L  Y  Q  L  L  N  R  A  R  L  R  P  V  L  K  L  K  *  R  P  I  W  C  R  N  M  S  Q  S  S  S  R  S  N  H  *  S  *  I  Y  T  H  G  A  I  F  I  C  S  L  P  Q  V  L  Q  R  Y  E  C  T  *  Y  C  T  R  Q  T  S  P  F  C  L  *  S  A  Q  Q  G  *  I  C  S  G  L  S  S  F  K  I  A  E  C  G  H  Q  K  H  A  G  C  L  P  L  L  S  K  C  *  V  A  R  N  P  *  E  F  L  S  F  L  L  V  E  Y  F  A  V  A  E  N  L  R  Q  Y  W  L  L  K  L  F  C  *  T  K  W  L  L  L  V  Y  *  G  V  F  I  N  Y  I  Y  I  T  *  W  R  A  L  F   </first_frame>
            <second_frame>  *  C  K  G  *  I  I  Q  *  Q  E  N  C  *  V  L  F  K  T  C  I  G  S  S  K  C  *  S  C  *   : A  T  W  S  C  *  S  S  S  I  S  F  S  Q  C  C  S  V  G  R  P  *  :  G  K  N  K  T  D  A  F  E  E  S  A  P  C  *  S  *  W  K  C  R  I  I  F  :  Q  S  Y  C  C  I  R  C  Q  T  S  Q  S  R  Y  S  S  N  L  Q  Y  Q  F  Q  V  *  C  K  S  *  E  K  E  R   : V  L  L  Q  A  *  R  K  N  P  G  K  G  S  *  E  E  *  Y  A  S  Q  D  *   : G  N  S  G  S  *  D  Q  N  V  K  E  E  L  K  I  *  S  D  T  H  A  K  L  L  S  G  T  C  T  S  K  D  G  V  E  E   : D  S  T  N  Q  S  *  I  P  Q  T  W  E  E  K  E  L  A  H  Q  R  K  N  Q  *  E  C  H  A  P  G  *  V  K  L  G  R  K  C  I  P  K  *  P  S  Q  R  A  F  S  S  H  C  *  E  A  S  K  E  V  T  S  K  A  A  I  *  E  N  Q  L  I  Q  *  N  K  K  A  F  H  S  Q  V  *  L  I  Q  R  I  S  *  S  C  I  S  A  E  C  F  T  Q  G  N  K  *  S  F  F  S  T  K  *  P  T  Q  A  S  Y  *  I  *  C  R  W  S  R  V  *  G  C  I  S  C  *  T  E  P  D  *  D  R  C  *  S  S  N  R  D  Q  S  G  A  G  T  C  H  N  R  A  V  E  A  T  T  E  V  E  Y  I  L  M  E  Q  S  S  F  A  L  C  L  K  Y  C  K  G  M  N  A  L  D  I  V  L  G  K  H  R  H  F  V  Y  S  Q  R  S  K  V  E  F  V  V  V  Y  L  L  S  R  L  L  S  V  V  I  R  N  M  Q  A  A  C  L  C  Y  L  N  V  E  *  P  E  I  L  K  N  F  C  L  F  Y  *  S  S  T  L  Q  L  Q  K  T  *  D  S  T  G  C  *  N  C  S  V  E  P  N  G  C  C  L  F  I  K  V  Y  L  *  I  T  Y  T  L  H  D  G  E  L  C  S  </second_frame>
            <third_frame>   D  A  K  G  K  S  F  S  D  K  K  T  V  E  Y  Y  S  K  P  A  L  A  H  L  N  V  D  R  A  K  :  Q  P  G  H  A  E  V  A  A  S  A  S  P  S  A  A  Q  S  E  G  L  K :   E  K  T  K  L  M  P  L  K  K  V  P  P  A  K  A  D  G  S  A  E  S  S  S :   S  P  T  A  A  S  D  A  K  P  R  K  V  G  T  L  P  T  Y  N  I  S  F  K  C  D  A  R  A  E  K  R  K  E  :  F  Y  S  K  L  E  E  K  T  Q  A  K  E  V  E  K  S  N  M  Q  A  K  T  K  :  E  T  Q  E  A  E  I  K  M  L  R  K  S  L  K  F  K  A  T  P  M  P  S  F  Y  Q  E  P  A  P  P  K  M  E  L  K  K  :  I  P  P  T  R  A  K  S  P  K  L  G  R  R  K  S  S  P  T  K  E  R  I  N  E  S  V  M  R  P  G  R  L  S  L  D  E  N  A  S  Q  N  N  P  V  K  G  H  S  P  L  I  V  K  K  P  Q  R  K  S  L  P  K  L  P  S  E  K  T  N  L  S  N  E  T  R  K  L  S  I  R  K  S  S  S  S  K  E  S  A  E  A  A  S  L  P  N  A  L  P  K  E  T  S  E  V  S  S  Q  P  N  N  Q  H  K  Q  A  T  E  F  D  A  D  G  R  E  C  E  V  V  S  V  V  E  P  S  Q  T  E  T  G  V  K  A  Q  I  E  T  N  L  V  Q  E  H  V  T  I  E  Q  *  K  Q  P  L  K  L  N  I  Y  S  W  S  N  L  H  L  L  F  A  S  S  I  A  K  V  *  M  H  L  I  L  Y  *  A  N  I  A  I  L  S  I  V  S  A  A  R  L  N  L  *  W  S  I  F  F  Q  D  C  *  V  W  S  S  E  T  C  R  L  L  A  S  V  I  *  M  L  S  S  Q  K  S  L  R  I  F  V  F  S  T  S  R  V  L  C  S  C  R  K  L  E  T  V  L  A  A  E  T  V  L  L  N  Q  M  V  V  A  C  L  L  R  C  I  Y  K  L  H  I  H  Y  M  M  E  S  F  V  Q </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06SLm0135H21.1" strand="-"/>
                <serials PGL_serial="13" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="91119" stop="91030"/>
                    <exon start="90899" stop="90835"/>
                    <exon start="90691" stop="90620"/>
                    <exon start="90519" stop="90417"/>
                    <exon start="90320" stop="90249"/>
                    <exon start="90145" stop="90035"/>
                    <exon start="87322" stop="86843"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>990</number_coding_nucleotides>
                  <number_encoded_amino_acids>330</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DAKGKSFSDKKTVEYYSKPALAHLNVDRAKQPGHAEVAASASPSAAQSEGLKEKTKLMPLKKVPPAKADGSAESSSSPTAASDAKPRKVGTLPTYNISFKCDARAEKRKEFYSKLEEKTQAKEVEKSNMQAKTKETQEAEIKMLRKSLKFKATPMPSFYQEPAPPKMELKKIPPTRAKSPKLGRRKSSPTKERINESVMRPGRLSLDENASQNNPVKGHSPLIVKKPQRKSLPKLPSEKTNLSNETRKLSIRKSSSSKESAEAASLPNALPKETSEVSSQPNNQHKQATEFDADGRECEVVSVVEPSQTETGVKAQIETNLVQEHVTIEQ*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="87931" e_stop="87235"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="87931" e_stop="87235" e_length="697"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="87931" stop="87235"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U321117" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TCCCTTCAGGCACTTCACTATTCAGTTGGCAAAGAAATGGAGTTGCGAAACTAGATAGTATGCGGAAGTACTTCTATCTGGTGTCGATCTCTCCAAAGTGTTGAGCAAAAATTATCTGCTCTGAAGGTAAATTCTGGTGTATATGTTTACATCTGCCCCTATTTATCATGTGTATTATATTTTGTATCTATAACATATCTAAAATGAAGAAGAGTCTTGGTATACCTAGTAAAGCTTCTGCCACGTGATCTCTAGGTCACGGGTTTGAGCTGTGGAAACAATCTCTTGTAGAAATGCCGGGTAAGTCTGTGAAGGTCTGGACCCCCGCATAGTGGGAGCTTGGTGTGCCAGGCTGCCCTATACATTAAAATATATCTATCATAACCTAAATTTGATGCCTTACCTTTGCTGGTCATGCTAGGATGGTGGTATGTCATGTTCTTGTGAGTTTTATCTAAATAAATTTTCTAATATTTGCTTTCTTACTTACTATTTTTGTATATGTACAGCTGAAGCCCCTCCTAACGTAGTTTATTCTTCCTGTTTATTTTGAAATTTACTAGTTGCGGTGTTTAATTAACACCTTCTGTCACTATCTTATGATGTTAGATTCCACCAACCAGAGCTAAATCCCCCAAACTTGGGAGGAGAAAGAGCTCGCCCACCAAAGAAAGAATCAATGAGAGTGTCATGCGCC</gDNA_template>
            <first_frame> S  L  Q  A  L  H  Y  S  V  G  K  E  M  E  L  R  N  *  I  V  C  G  S  T  S  I  W  C  R  S  L  Q  S  V  E  Q  K  L  S  A  L  K  V  N  S  G  V  Y  V  Y  I  C  P  Y  L  S  C  V  L  Y  F  V  S  I  T  Y  L  K  *  R  R  V  L  V  Y  L  V  K  L  L  P  R  D  L  *  V  T  G  L  S  C  G  N  N  L  L  *  K  C  R  V  S  L  *  R  S  G  P  P  H  S  G  S  L  V  C  Q  A  A  L  Y  I  K  I  Y  L  S  *  P  K  F  D  A  L  P  L  L  V  M  L  G  W  W  Y  V  M  F  L  *  V  L  S  K  *  I  F  *  Y  L  L  S  Y  L  L  F  L  Y  M  Y  S  *  S  P  S  *  R  S  L  F  F  L  F  I  L  K  F  T  S  C  G  V  *  L  T  P  S  V  T  I  L  *  C  *  I  P  P  T  R  A  K  S  P  K  L  G  R  R  K  S  S  P  T  K  E  R  I  N  E  S  V  M  R  </first_frame>
            <second_frame>  P  F  R  H  F  T  I  Q  L  A  K  K  W  S  C  E  T  R  *  Y  A  E  V  L  L  S  G  V  D  L  S  K  V  L  S  K  N  Y  L  L  *  R  *  I  L  V  Y  M  F  T  S  A  P  I  Y  H  V  Y  Y  I  L  Y  L  *  H  I  *  N  E  E  E  S  W  Y  T  *  *  S  F  C  H  V  I  S  R  S  R  V  *  A  V  E  T  I  S  C  R  N  A  G  *  V  C  E  G  L  D  P  R  I  V  G  A  W  C  A  R  L  P  Y  T  L  K  Y  I  Y  H  N  L  N  L  M  P  Y  L  C  W  S  C  *  D  G  G  M  S  C  S  C  E  F  Y  L  N  K  F  S  N  I  C  F  L  T  Y  Y  F  C  I  C  T  A  E  A  P  P  N  V  V  Y  S  S  C  L  F  *  N  L  L  V  A  V  F  N  *  H  L  L  S  L  S  Y  D  V  R  F  H  Q  P  E  L  N  P  P  N  L  G  G  E  R  A  R  P  P  K  K  E  S  M  R  V  S  C  A </second_frame>
            <third_frame>   P  S  G  T  S  L  F  S  W  Q  R  N  G  V  A  K  L  D  S  M  R  K  Y  F  Y  L  V  S  I  S  P  K  C  *  A  K  I  I  C  S  E  G  K  F  W  C  I  C  L  H  L  P  L  F  I  M  C  I  I  F  C  I  Y  N  I  S  K  M  K  K  S  L  G  I  P  S  K  A  S  A  T  *  S  L  G  H  G  F  E  L  W  K  Q  S  L  V  E  M  P  G  K  S  V  K  V  W  T  P  A  *  W  E  L  G  V  P  G  C  P  I  H  *  N  I  S  I  I  T  *  I  *  C  L  T  F  A  G  H  A  R  M  V  V  C  H  V  L  V  S  F  I  *  I  N  F  L  I  F  A  F  L  L  T  I  F  V  Y  V  Q  L  K  P  L  L  T  *  F  I  L  P  V  Y  F  E  I  Y  *  L  R  C  L  I  N  T  F  C  H  Y  L  M  M  L  D  S  T  N  Q  S  *  I  P  Q  T  W  E  E  K  E  L  A  H  Q  R  K  N  Q  *  E  C  H  A   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C06SLm0135H21.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="14" PGL_strand="-" PGL_start="92630" PGL_stop="91270"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="92630" e_stop="92379"/>
            <exon e_start="91669" e_stop="91381"/>
            <exon e_start="91302" e_stop="91270"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.875" acc_prob="0.925" e_score="1.000"/>
          <exon-intron don_prob="0.745" acc_prob="0.997" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="92630" e_stop="92379" e_length="252"/>
          </exon>
          <intron i_serial="1" don_prob="0.875" acc_prob="0.925">
            <gDNA_intron_boundary i_start="92378" i_stop="91670" i_length="709"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="91669" e_stop="91381" e_length="289"/>
          </exon>
          <intron i_serial="2" don_prob="0.745" acc_prob="0.997">
            <gDNA_intron_boundary i_start="91380" i_stop="91303" i_length="78"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="91302" e_stop="91270" e_length="33"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="92630" stop="92379"/>
              <exon start="91669" stop="91381"/>
              <exon start="91302" stop="91270"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U323467" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CAAAACTGTCCCCCCCCCCCTCTTCTCTATTTTTGAGTTGAGAATTTTGTGAAATAGAGAAACCCCATCTTCAAAGTTCTCAACTTTTCACTTTCAAGTTCAAGAAAACACCATCTTTAGAGCATTTTCATAAATTGTTTCTAAGATTTTCAAGATTCTTGTTTGTTTTGTAAGTGTTTGGCTTTCTGTGTCAAGATTCTATCAGATCCCTTGTGGATTTCATGGGCTTGTGATCTTTTTATGGTTGTTTAG : AATTGTGATTGCAAAATTTGAAACATTATAGAGCATGATGGATGTTGTCAATAACATAGCTGTTTCTGGAAATGGGTTGGGCTTTGGAAATGGAGTTCACCAACTTCCAGAAGTTGTTGCTGGCATATCCAATGGGATGCCTCATGCAAGTCCCAGTAATGAAGAATTAGAGAGGAGTTTCCAGAGCACTGTCATATTGACGGATAGTGAAACAGTTGGATCTTCTGTCCAAGAGGTCAGTAATGAAACTACAATTACTGTAGAAAGCAATGCTGGTGTCAGTTCCGAG : GAACACGAAGCAAAAGAATCTGATGATGCAACA</gDNA_template>
            <first_frame> Q  N  C  P  P  P  P  L  L  Y  F  *  V  E  N  F  V  K  *  R  N  P  I  F  K  V  L  N  F  S  L  S  S  S  R  K  H  H  L  *  S  I  F  I  N  C  F  *  D  F  Q  D  S  C  L  F  C  K  C  L  A  F  C  V  K  I  L  S  D  P  L  W  I  S  W  A  C  D  L  F  M  V  V  *  :  N  C  D  C  K  I  *  N  I  I  E  H  D  G  C  C  Q  *  H  S  C  F  W  K  W  V  G  L  W  K  W  S  S  P  T  S  R  S  C  C  W  H  I  Q  W  D  A  S  C  K  S  Q  *  *  R  I  R  E  E  F  P  E  H  C  H  I  D  G  *  *  N  S  W  I  F  C  P  R  G  Q  *  *  N  Y  N  Y  C  R  K  Q  C  W  C  Q  F  R   : G  T  R  S  K  R  I  *  *  C  N  </first_frame>
            <second_frame>  K  T  V  P  P  P  L  F  S  I  F  E  L  R  I  L  *  N  R  E  T  P  S  S  K  F  S  T  F  H  F  Q  V  Q  E  N  T  I  F  R  A  F  S  *  I  V  S  K  I  F  K  I  L  V  C  F  V  S  V  W  L  S  V  S  R  F  Y  Q  I  P  C  G  F  H  G  L  V  I  F  L  W  L  F  R :   I  V  I  A  K  F  E  T  L  *  S  M  M  D  V  V  N  N  I  A  V  S  G  N  G  L  G  F  G  N  G  V  H  Q  L  P  E  V  V  A  G  I  S  N  G  M  P  H  A  S  P  S  N  E  E  L  E  R  S  F  Q  S  T  V  I  L  T  D  S  E  T  V  G  S  S  V  Q  E  V  S  N  E  T  T  I  T  V  E  S  N  A  G  V  S  S  E  :  E  H  E  A  K  E  S  D  D  A  T </second_frame>
            <third_frame>   K  L  S  P  P  P  S  S  L  F  L  S  *  E  F  C  E  I  E  K  P  H  L  Q  S  S  Q  L  F  T  F  K  F  K  K  T  P  S  L  E  H  F  H  K  L  F  L  R  F  S  R  F  L  F  V  L  *  V  F  G  F  L  C  Q  D  S  I  R  S  L  V  D  F  M  G  L  *  S  F  Y  G  C  L   : E  L  *  L  Q  N  L  K  H  Y  R  A  *  W  M  L  S  I  T  *  L  F  L  E  M  G  W  A  L  E  M  E  F  T  N  F  Q  K  L  L  L  A  Y  P  M  G  C  L  M  Q  V  P  V  M  K  N  *  R  G  V  S  R  A  L  S  Y  *  R  I  V  K  Q  L  D  L  L  S  K  R  S  V  M  K  L  Q  L  L  *  K  A  M  L  V  S  V  P  R :   N  T  K  Q  K  N  L  M  M  Q   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06SLm0135H21.1" strand="-"/>
                <serials PGL_serial="14" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="91638" stop="91381"/>
                    <exon start="91302" stop="91270"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>291</number_coding_nucleotides>
                  <number_encoded_amino_acids>97</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SMMDVVNNIAVSGNGLGFGNGVHQLPEVVAGISNGMPHASPSNEELERSFQSTVILTDSETVGSSVQEVSNETTITVESNAGVSSEEHEAKESDDAT</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="15" PGL_strand="-" PGL_start="113697" PGL_stop="112429"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="113697" e_stop="113478"/>
            <exon e_start="113326" e_stop="113233"/>
            <exon e_start="112658" e_stop="112429"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.907" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="1.000" e_score="1.000"/>
          <exon-only e_score="0.991"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="113697" e_stop="113478" e_length="220"/>
          </exon>
          <intron i_serial="1" don_prob="0.907" acc_prob="0.994">
            <gDNA_intron_boundary i_start="113477" i_stop="113327" i_length="151"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="113326" e_stop="113233" e_length="94"/>
          </exon>
          <intron i_serial="2" don_prob="0.998" acc_prob="1.000">
            <gDNA_intron_boundary i_start="113232" i_stop="112659" i_length="574"/>
          </intron>
          <exon e_serial="3" e_score="0.991">
            <gDNA_exon_boundary e_start="112658" e_stop="112429" e_length="230"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="113697" stop="113478"/>
              <exon start="113326" stop="113233"/>
              <exon start="112658" stop="112429"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U343989" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TGGAGAAAAAAACTAATTCATGGGATTAATCATGAAGTTGGATGGAACAAAAATAATAATAACAATAATAATAATAATCATAGACACAATATTGGAATTAGAAATTCCATGTATGTGAAGGTTAAAATGGAAGGAGTAGCCATTGGAAGAAAAATTGATCTAATGTTATATAATTCTTACCAAATCCTTACTAACACTTTGCTCCAAATGTTTAATAAAT : CACATGAGAGTTGTGATGAAAATGATGGACGCTTTACACTACTGTACCAAGACAAAGAAGGAGATTGGATGCTTGCTGGAGATGTACCATGGGA : AACATTCATGGAGACAGTTCAGAGAATACAGATTCTAAGTAATTGGAAGAGTGGAGGAAGCACAAGAAAATCATCCCATATTCCTCAACAGTTTTGATTATATTATATTTAGTTTAATTAGTAAAGAATGTTGAAGGTAATTGATTAAAAGATATGAAGAAGAAAAAATTAGTTAAATGAGTTTGACATTGTAATTTTATTATCCTATAATGTAATTTTATATTTATTTT</gDNA_template>
            <first_frame> W  R  K  K  L  I  H  G  I  N  H  E  V  G  W  N  K  N  N  N  N  N  N  N  N  N  H  R  H  N  I  G  I  R  N  S  M  Y  V  K  V  K  M  E  G  V  A  I  G  R  K  I  D  L  M  L  Y  N  S  Y  Q  I  L  T  N  T  L  L  Q  M  F  N  K   : S  H  E  S  C  D  E  N  D  G  R  F  T  L  L  Y  Q  D  K  E  G  D  W  M  L  A  G  D  V  P  W  E :   T  F  M  E  T  V  Q  R  I  Q  I  L  S  N  W  K  S  G  G  S  T  R  K  S  S  H  I  P  Q  Q  F  *  L  Y  Y  I  *  F  N  *  *  R  M  L  K  V  I  D  *  K  I  *  R  R  K  N  *  L  N  E  F  D  I  V  I  L  L  S  Y  N  V  I  L  Y  L  F  </first_frame>
            <second_frame>  G  E  K  N  *  F  M  G  L  I  M  K  L  D  G  T  K  I  I  I  T  I  I  I  I  I  I  D  T  I  L  E  L  E  I  P  C  M  *  R  L  K  W  K  E  *  P  L  E  E  K  L  I  *  C  Y  I  I  L  T  K  S  L  L  T  L  C  S  K  C  L  I  N  :  H  M  R  V  V  M  K  M  M  D  A  L  H  Y  C  T  K  T  K  K  E  I  G  C  L  L  E  M  Y  H  G   : K  H  S  W  R  Q  F  R  E  Y  R  F  *  V  I  G  R  V  E  E  A  Q  E  N  H  P  I  F  L  N  S  F  D  Y  I  I  F  S  L  I  S  K  E  C  *  R  *  L  I  K  R  Y  E  E  E  K  I  S  *  M  S  L  T  L  *  F  Y  Y  P  I  M  *  F  Y  I  Y  F </second_frame>
            <third_frame>   E  K  K  T  N  S  W  D  *  S  *  S  W  M  E  Q  K  *  *  *  Q  *  *  *  *  S  *  T  Q  Y  W  N  *  K  F  H  V  C  E  G  *  N  G  R  S  S  H  W  K  K  N  *  S  N  V  I  *  F  L  P  N  P  Y  *  H  F  A  P  N  V  *  *  I :   T  *  E  L  *  *  K  *  W  T  L  Y  T  T  V  P  R  Q  R  R  R  L  D  A  C  W  R  C  T  M  G  :  N  I  H  G  D  S  S  E  N  T  D  S  K  *  L  E  E  W  R  K  H  K  K  I  I  P  Y  S  S  T  V  L  I  I  L  Y  L  V  *  L  V  K  N  V  E  G  N  *  L  K  D  M  K  K  K  K  L  V  K  *  V  *  H  C  N  F  I  I  L  *  C  N  F  I  F  I   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06SLm0135H21.1" strand="-"/>
                <serials PGL_serial="15" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="113697" stop="113478"/>
                    <exon start="113326" stop="113233"/>
                    <exon start="112658" stop="112562"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>408</number_coding_nucleotides>
                  <number_encoded_amino_acids>136</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>WRKKLIHGINHEVGWNKNNNNNNNNNHRHNIGIRNSMYVKVKMEGVAIGRKIDLMLYNSYQILTNTLLQMFNKSHESCDENDGRFTLLYQDKEGDWMLAGDVPWETFMETVQRIQILSNWKSGGSTRKSSHIPQQF*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 25 chains have been computed
$ 
$ memory statistics:
$ 65856 bytes spliced alignments in total
$ 18 spliced alignments have been stored
$ 3658 bytes was the average size of a spliced alignment
$ 23416 bytes predicted gene locations in total
$ 15 predicted gene locations have been stored
$ 1561 bytes was the average size of a predicted gene location
$ 2 megabytes was the average size of the backtrace matrix
$ 31 backtrace matrices have been allocated
$ 
$ date finished: 2009-01-16 21:00:22
-->
