SW perc perc perc query position in query matching repeat position in repeat score div. del. ins. sequence begin end (left) repeat class/family begin end (left) ID 404 11.7 9.5 6.6 C06HBa0020O17.1 46 182 (99363) + Copia00039 Copia 908 1048 (3502) 1 * 454 11.6 11.6 7.4 C06HBa0020O17.1 67 187 (99358) C Copia00039 Copia (3502) 1048 923 2 387 17.2 3.7 9.6 C06HBa0020O17.1 163 297 (99248) C Copia00039 Copia (3502) 1048 922 2 * 538 22.9 2.2 14.4 C06HBa0020O17.1 205 475 (99070) + Copia00113 Copia 5262 5499 (6907) 3 933 17.9 4.9 3.9 C06HBa0020O17.1 270 473 (99072) C Copia00039 Copia (4085) 465 260 2 1058 22.6 9.0 2.4 C06HBa0020O17.1 480 892 (98653) + TONT1_LE_LTR Unknown 559 998 (6) 4 * 1402 20.4 0.3 3.0 C06HBa0020O17.1 570 902 (98643) C Copia00110 Copia (11934) 2198 1875 5 406 23.5 4.0 4.6 C06HBa0020O17.1 3186 3359 (96186) C GYPSODE1_LTR Unknown (75) 2888 2716 6 284 30.1 2.9 0.7 C06HBa0020O17.1 3252 3388 (96157) + Gypsy00034 Gypsy 5588 5727 (1278) 7 * 465 22.1 1.9 4.3 C06HBa0020O17.1 4384 4544 (95001) C Gypsy00077 Gypsy (5951) 162 6 8 * 1619 20.8 3.2 1.5 C06HBa0020O17.1 4543 4947 (94598) + Unknown00029 Unknown 4710 5121 (588) 9 * 1634 10.8 0.0 0.8 C06HBa0020O17.1 4943 5185 (94360) + Copia00168 Copia 3139 3379 (1277) 10 * 3760 10.6 0.9 0.9 C06HBa0020O17.1 5176 5735 (93810) + Copia00005 Copia 4020 4579 (312) 11 1463 11.9 8.9 4.3 C06HBa0020O17.1 8105 8430 (91115) + Gypsy00163 Gypsy 7734 8074 (673) 12 647 17.3 1.1 7.2 C06HBa0020O17.1 8698 8878 (90667) + Gypsy00163 Gypsy 8024 8193 (554) 13 6983 9.1 1.0 0.5 C06HBa0020O17.1 9996 10997 (88548) + Copia00005 Copia 3573 4579 (312) 14 256 15.6 0.0 0.0 C06HBa0020O17.1 12011 12074 (87471) C EnSpm1_HV Unknown (1177) 9357 9294 15 6619 15.8 1.8 0.5 C06HBa0020O17.1 13796 14915 (84630) C Copia00019 Copia (3991) 1256 123 16 279 17.3 1.2 6.2 C06HBa0020O17.1 14847 14926 (84619) + Copia00196 Copia 4856 4931 (16) 17 * 485 21.4 1.9 4.3 C06HBa0020O17.1 19319 19479 (80066) C Gypsy00077 Gypsy (5951) 162 6 18 * 2966 22.7 4.3 2.9 C06HBa0020O17.1 19471 20405 (79140) + Unknown00029 Unknown 4698 5645 (64) 19 * 3090 20.3 5.9 2.9 C06HBa0020O17.1 19766 20598 (78947) C Gypsy00077 Gypsy (11) 6102 5245 20 375 21.0 0.0 3.9 C06HBa0020O17.1 20904 20917 (78628) + Copia00110 Copia 13392 13446 (686) 21 376 14.3 0.0 4.9 C06HBa0020O17.1 20918 20998 (78547) + Gypsy00043 Gypsy 1025 1101 (12793) 22 259 29.5 3.5 3.5 C06HBa0020O17.1 23541 23656 (75889) + Copia00089 Copia 532 647 (10809) 23 623 26.5 6.0 7.4 C06HBa0020O17.1 23715 24117 (75428) + Gypsy00077 Gypsy 5405 5801 (312) 24 306 24.4 6.5 3.0 C06HBa0020O17.1 24143 24180 (75365) + Copia00089 Copia 1003 1129 (10327) 23 355 17.1 10.9 1.7 C06HBa0020O17.1 24181 24299 (75246) + Gypsy00155 Gypsy 5366 5495 (1154) 25 306 24.4 6.5 3.0 C06HBa0020O17.1 24300 24311 (75234) + Copia00089 Copia 1130 1167 (10289) 23 * 2825 8.1 0.0 0.3 C06HBa0020O17.1 24301 24682 (74863) C Copia00019 Copia (4001) 1246 866 26 7199 19.2 1.1 1.3 C06HBa0020O17.1 24790 27059 (72486) C Copia00105 Copia (5004) 3853 1546 27 8340 16.5 0.4 3.9 C06HBa0020O17.1 27172 28782 (70763) C Copia00105 Copia (7299) 1558 3 27 483 26.3 0.7 0.7 C06HBa0020O17.1 28950 29087 (70458) + Copia00172 Copia 3706 3843 (2784) 28 363 27.7 7.6 0.5 C06HBa0020O17.1 41242 41426 (58119) C Gypsy00046 Gypsy (6328) 4743 4546 29 431 22.1 1.2 4.8 C06HBa0020O17.1 41244 41409 (58136) + Gypsy00155 Gypsy 4845 5004 (1645) 30 44138 4.0 1.0 1.1 C06HBa0020O17.1 42245 51196 (48349) + Unknown00037 Unknown 1 4839 (0) 31 1147 12.0 1.1 0.0 C06HBa0020O17.1 52665 52855 (46690) + Copia00198 Copia 2861 3053 (5303) 32 341 20.4 2.5 5.0 C06HBa0020O17.1 53240 53358 (46187) C Gypsy00077 Gypsy (5951) 162 47 33 269 19.0 0.0 1.7 C06HBa0020O17.1 54207 54265 (45280) + Gypsy00168 Gypsy 1332 1389 (6793) 34 307 7.0 5.6 0.0 C06HBa0020O17.1 54337 54407 (45138) + Gypsy00046 Gypsy 4065 4139 (6932) 35 61985 9.0 1.7 1.4 C06HBa0020O17.1 54879 63830 (35715) + Gypsy00073 Gypsy 1501 11846 (0) 36 296 11.6 0.0 0.0 C06HBa0020O17.1 67586 67628 (31917) + Copia00063 Copia 152 194 (3722) 37 * 4780 18.4 4.9 1.5 C06HBa0020O17.1 67605 68557 (30988) C Copia00019 Copia (0) 5247 4262 38 6800 15.6 0.9 5.0 C06HBa0020O17.1 68558 69941 (29604) C Copia00089 Copia (2696) 8760 355 39 3967 16.7 2.5 3.5 C06HBa0020O17.1 69917 70789 (28756) C Copia00089 Copia (3944) 7512 6649 39 * 746 19.0 5.9 0.6 C06HBa0020O17.1 72973 73141 (26404) + TONT1_LE_LTR Unknown 68 245 (759) 40 723 20.8 5.2 1.6 C06HBa0020O17.1 73142 73163 (26382) + Copia00085 Copia 4689 4886 (269) 41 845 22.3 1.8 4.9 C06HBa0020O17.1 73293 73518 (26027) + Copia00039 Copia 247 465 (4085) 42 * 855 14.7 8.6 11.6 C06HBa0020O17.1 73434 73865 (25680) C Copia00039 Copia (3502) 1048 630 43 254 0.0 0.0 0.0 C06HBa0020O17.1 73870 73914 (25631) + MUDSOLT1 Unknown 479 523 (3819) 44 245 6.2 0.0 5.9 C06HBa0020O17.1 73915 73937 (25608) + Copia00105 Copia 7481 7544 (1313) 45 3834 25.1 5.5 4.8 C06HBa0020O17.1 79552 81106 (18439) C Copia00089 Copia (8512) 2944 1378 46 2186 34.1 5.2 5.4 C06HBa0020O17.1 81117 83761 (15784) C Gypsy00067 Gypsy (3182) 3245 605 47 267 25.4 11.5 7.0 C06HBa0020O17.1 84015 84171 (15374) C Copia00089 Copia (7623) 3833 3670 48 248 26.9 0.0 1.5 C06HBa0020O17.1 84275 84342 (15203) C Copia00089 Copia (7923) 3533 3467 48 * 340 29.3 11.2 1.6 C06HBa0020O17.1 84322 84446 (15099) C Gypsy00020 Gypsy (63) 6179 6043 49 1640 12.3 2.9 0.4 C06HBa0020O17.1 85591 85868 (13677) + Unknown00034 Unknown 3794 4078 (4999) 50 6475 10.3 4.4 2.0 C06HBa0020O17.1 87280 88318 (11227) C Gypsy00107 Gypsy (992) 9907 8844 51 5865 16.7 1.1 1.4 C06HBa0020O17.1 88428 89550 (9995) C GYPSODE1_LTR Unknown (0) 2963 1922 52 1587 19.3 4.4 8.7 C06HBa0020O17.1 89798 90383 (9162) C LHI1 Unknown (206) 710 150 53 795 22.8 2.5 3.0 C06HBa0020O17.1 90386 90620 (8925) C LHI1 Unknown (681) 235 2 54 3893 19.0 4.9 0.5 C06HBa0020O17.1 90643 91413 (8132) C GYPSODE1_LTR Unknown (994) 1969 1165 55 1211 14.1 0.0 0.0 C06HBa0020O17.1 91678 91862 (7683) + Gypsy00181 Gypsy 47 231 (6479) 56 * 23255 12.8 2.5 2.4 C06HBa0020O17.1 91855 95678 (3867) + Gypsy00208 Gypsy 3072 6898 (1157) 57 2329 20.8 4.1 0.4 C06HBa0020O17.1 95679 96186 (3359) + Copia00205 Copia 5177 5703 (4553) 58 1065 26.5 4.8 0.8 C06HBa0020O17.1 96168 96521 (3024) + Unknown00051 Unknown 1 368 (5088) 59 1361 19.7 2.8 5.3 C06HBa0020O17.1 96522 96546 (2999) C Copia00191 Copia (1950) 2776 2669 60 506 21.2 5.1 7.9 C06HBa0020O17.1 99331 99545 (0) C Copia00151 Copia (4906) 5855 5647 61