SW perc perc perc query position in query matching repeat position in repeat score div. del. ins. sequence begin end (left) repeat class/family begin end (left) ID 4770 4.9 2.6 3.1 C06HBa0034C13.1 5542 6194 (112162) C Unknown00019 Unknown (13936) 697 48 1 25651 4.7 0.2 0.3 C06HBa0034C13.1 12213 15339 (103017) C Gypsy00201 Gypsy (2599) 3897 774 2 1169 22.6 1.0 0.7 C06HBa0034C13.1 15466 15755 (102601) C TLP1 Unknown (3) 659 369 3 443 26.1 4.4 2.0 C06HBa0034C13.1 18206 18408 (99948) + SONATA1 Unknown 5 212 (31) 4 336 17.2 14.9 1.1 C06HBa0034C13.1 28564 28657 (89699) + SONATA2 Unknown 122 228 (25) 5 398 20.9 1.8 0.0 C06HBa0034C13.1 35976 36085 (82271) + SONATA1 Unknown 132 243 (0) 6 258 34.5 0.7 0.7 C06HBa0034C13.1 36436 36581 (81775) + RTE1_MT Unknown 1873 2018 (1137) 7 306 23.5 0.0 1.2 C06HBa0034C13.1 39587 39668 (78688) + SINE_SO Unknown 10 90 (99) 8 * 785 23.4 5.5 0.5 C06HBa0034C13.1 39668 39869 (78487) + Copia00151 Copia 5513 5724 (5037) 9 1789 15.5 2.7 2.0 C06HBa0034C13.1 48990 49486 (68870) + Copia00110 Copia 13155 13619 (513) 10 892 25.2 5.8 6.3 C06HBa0034C13.1 49207 49651 (68705) + Gypsy00073 Gypsy 936 1378 (10706) 11 * 255 18.1 4.7 2.4 C06HBa0034C13.1 50490 50574 (67782) C Gypsy00163 Gypsy (896) 7851 7765 12 785 16.1 0.8 0.0 C06HBa0034C13.1 52904 53027 (65329) + TS2 Unknown 531 655 (0) 13 418 20.0 5.2 2.1 C06HBa0034C13.1 55847 55943 (62413) + TS Unknown 58 157 (4) 14 1157 17.9 0.0 3.9 C06HBa0034C13.1 58414 58646 (59710) C Copia00172 Copia (6105) 522 299 15 562 20.8 18.9 2.9 C06HBa0034C13.1 65751 65988 (52368) + POTTEN1 Unknown 3 278 (831) 16 752 26.2 3.5 4.5 C06HBa0034C13.1 66138 66449 (51907) C POTTEN2 Unknown (488) 309 1 17 * 1001 22.3 5.5 1.6 C06HBa0034C13.1 66176 66485 (51871) + Gypsy00107 Gypsy 9624 9945 (954) 18 571 22.6 0.0 1.6 C06HBa0034C13.1 68971 69096 (49260) + Copia00172 Copia 5195 5318 (1309) 19 513 14.9 7.7 2.6 C06HBa0034C13.1 72074 72190 (46166) C HarbN_I Unknown (78) 127 5 20 297 19.1 1.5 4.5 C06HBa0034C13.1 74484 74549 (43807) C TS Unknown (31) 130 67 21 245 14.0 2.0 0.0 C06HBa0034C13.1 76181 76230 (42126) C Unknown00037 Unknown (175) 4664 4614 22 257 26.8 2.4 2.4 C06HBa0034C13.1 86309 86392 (31964) + Copia00172 Copia 5230 5313 (1314) 23 379 30.7 8.1 3.0 C06HBa0034C13.1 90567 90801 (27555) + Unknown00040 Unknown 4428 4674 (8) 24 19100 9.8 2.1 0.8 C06HBa0034C13.1 90945 93760 (24596) C Gypsy00069 Gypsy (1467) 4546 1693 25 1250 15.1 6.0 2.6 C06HBa0034C13.1 95847 96112 (22244) C Gypsy00163 Gypsy (733) 8014 7740 26 250 8.1 1.4 3.1 C06HBa0034C13.1 99015 99090 (19266) + Copia00089 Copia 1791 5625 (374) 27 * 262 9.3 0.0 0.0 C06HBa0034C13.1 99044 99097 (19259) + MUDSOLT1 Unknown 472 525 (3817) 28 332 29.9 0.7 9.9 C06HBa0034C13.1 99533 99673 (18683) + LSU-rRNA_Ath Unknown 1836 1963 (1412) 29 7168 8.0 3.4 0.3 C06HBa0034C13.1 101930 102930 (15426) C Gypsy00050 Gypsy (5976) 1058 27 30 332 29.9 0.7 9.9 C06HBa0034C13.1 103387 103527 (14829) + LSU-rRNA_Ath Unknown 1836 1963 (1412) 31 724 19.9 4.3 0.5 C06HBa0034C13.1 108353 108539 (9817) C SONATA2 Unknown (47) 206 13 32 13361 5.9 0.1 1.1 C06HBa0034C13.1 109897 111607 (6749) C Gypsy00031 Gypsy (1265) 6004 4311 33