SW perc perc perc query position in query matching repeat position in repeat score div. del. ins. sequence begin end (left) repeat class/family begin end (left) ID 317 29.9 6.3 4.6 C06HBa0062H07.1 433 607 (120357) C Copia00194 Copia (7149) 3113 2936 1 712 19.5 4.4 5.7 C06HBa0062H07.1 747 974 (119990) + Copia00158 Copia 2095 2319 (1999) 2 351 27.0 2.5 3.9 C06HBa0062H07.1 1224 1427 (119537) C TORTL1 Unknown (7090) 2605 2405 3 503 31.6 0.7 1.1 C06HBa0062H07.1 1581 1852 (119112) C Copia00180 Copia (10493) 1514 1244 4 235 21.1 0.0 0.0 C06HBa0062H07.1 1865 1916 (119048) C Copia00043 Copia (6953) 1116 1065 5 1657 29.1 3.1 3.0 C06HBa0062H07.1 2172 3217 (117747) C Copia00212 Copia (7223) 1114 1 6 345 26.9 1.9 0.0 C06HBa0062H07.1 5954 6057 (114907) + SOD_SINE Unknown 87 192 (53) 7 306 21.2 7.2 4.3 C06HBa0062H07.1 6819 6956 (114008) + Unknown00002 Unknown 4364 4505 (5476) 8 * 28609 0.3 0.0 0.0 C06HBa0062H07.1 6836 10155 (110809) + Gypsy00003 Gypsy 5074 8393 (0) 9 4649 8.4 2.7 1.6 C06HBa0062H07.1 9658 10405 (110559) C Unknown00008 Unknown (1331) 3122 2367 10 * 73423 0.2 0.0 0.0 C06HBa0062H07.1 10253 18646 (102318) + Gypsy00003 Gypsy 1 8393 (0) 11 4691 8.3 2.8 1.6 C06HBa0062H07.1 18149 18895 (102069) C Unknown00008 Unknown (1331) 3122 2367 12 * 73810 0.0 0.0 0.0 C06HBa0062H07.1 18742 27134 (93830) + Gypsy00003 Gypsy 1 8393 (0) 13 3602 7.9 3.5 3.3 C06HBa0062H07.1 26637 27236 (93728) C Unknown00008 Unknown (1331) 3122 2522 14 * 6106 22.5 2.9 0.4 C06HBa0062H07.1 27268 28697 (92267) C Copia00075 Copia (0) 5122 3459 15 10095 12.2 6.0 4.4 C06HBa0062H07.1 28703 30751 (90213) C Gypsy00197 Gypsy (5582) 3359 1279 16 9985 9.1 3.8 0.7 C06HBa0062H07.1 29365 31010 (89954) + Gypsy00089 Gypsy 4074 5730 (178) 17 * 2321 26.2 2.0 3.2 C06HBa0062H07.1 31019 31715 (89249) C Copia00091 Copia (1412) 3443 2755 18 1171 20.5 3.3 3.6 C06HBa0062H07.1 32622 33024 (87940) + Copia00212 Copia 1 571 (7871) 19 1397 31.7 6.0 6.1 C06HBa0062H07.1 33040 34760 (86204) + Copia00025 Copia 732 2431 (5703) 20 228 19.5 0.0 0.0 C06HBa0062H07.1 35092 35132 (85832) + Copia00043 Copia 3810 3850 (4219) 21 513 31.6 1.4 4.1 C06HBa0062H07.1 35142 35435 (85529) + Copia00212 Copia 4386 4671 (3502) 22 230 32.5 0.0 1.2 C06HBa0062H07.1 35460 35543 (85421) + Copia00070 Copia 4924 5006 (1294) 23 721 24.0 5.5 5.5 C06HBa0062H07.1 35769 36059 (84905) + Copia00043 Copia 4714 5004 (3065) 24 385 19.7 6.0 15.1 C06HBa0062H07.1 37272 37502 (83462) C Copia00158 Copia (4030) 288 17 25 401 7.6 0.0 2.9 C06HBa0062H07.1 37503 37570 (83394) + TORTL1 Unknown 8852 8917 (778) 26 331 17.2 1.1 2.2 C06HBa0062H07.1 37603 37691 (83273) + Copia00043 Copia 7815 7902 (167) 27 334 15.4 0.0 1.5 C06HBa0062H07.1 37748 37813 (83151) C Copia00158 Copia (4237) 81 17 28 534 1.6 0.0 0.0 C06HBa0062H07.1 37986 38046 (82918) + Copia00022 Copia 7399 7459 (0) 29 67885 0.0 0.0 0.0 C06HBa0062H07.1 38758 46216 (74748) + Copia00022 Copia 1 7459 (0) 30 278 20.0 0.0 6.7 C06HBa0062H07.1 47005 47079 (73885) C Copia00158 Copia (4235) 83 14 31 244 25.7 0.8 9.2 C06HBa0062H07.1 47819 47938 (73026) + TORTL1 Unknown 9308 9417 (278) 32 1000 23.1 4.9 4.0 C06HBa0062H07.1 47947 48271 (72693) + Copia00194 Copia 172 499 (9763) 33 * 2765 24.6 1.2 0.1 C06HBa0062H07.1 48267 48957 (72007) C Copia00075 Copia (2075) 2778 2081 34 2871 25.6 3.2 3.7 C06HBa0062H07.1 49080 49914 (71050) C Copia00075 Copia (3913) 940 110 34 1249 13.2 0.0 1.0 C06HBa0062H07.1 55829 56035 (64929) + Gypsy00073 Gypsy 11880 12084 (0) 35 1938 13.3 2.2 0.8 C06HBa0062H07.1 56222 56586 (64378) + Gypsy00073 Gypsy 12 381 (11703) 36 226 6.6 0.0 1.6 C06HBa0062H07.1 57615 57676 (63288) + Copia00105 Copia 7456 7516 (1341) 37 * 237 2.1 0.0 0.0 C06HBa0062H07.1 57633 57680 (63284) C Gypsy00042 Gypsy (1513) 5985 5938 38 457 24.6 0.9 0.9 C06HBa0062H07.1 69519 69633 (51331) + Copia00172 Copia 5195 5309 (1318) 39 254 32.1 3.4 6.8 C06HBa0062H07.1 69798 69914 (51050) C Copia00172 Copia (1314) 5313 5201 40 4124 13.9 7.2 0.8 C06HBa0062H07.1 70380 71117 (49847) C GYLES1_LTR Unknown (0) 785 1 41 * 36803 8.2 0.4 0.1 C06HBa0062H07.1 70815 75731 (45233) + Gypsy00004 Gypsy 1 4931 (0) 42 17621 16.5 1.1 1.4 C06HBa0062H07.1 72864 76091 (44873) C Gypsy00157 Gypsy (1743) 3220 3 43 * 4537 13.4 3.1 0.9 C06HBa0062H07.1 75732 76499 (44465) C GYLES1_LTR Unknown (0) 785 1 44 * 1863 2.9 1.7 0.0 C06HBa0062H07.1 77942 78179 (42785) + Copia00143 Copia 5063 5304 (0) 45 42700 0.0 0.0 0.0 C06HBa0062H07.1 78285 82970 (37994) + Copia00143 Copia 1 4686 (618) 46 290 15.8 9.5 6.9 C06HBa0062H07.1 84520 84635 (36329) + Unknown00034 Unknown 5081 5199 (3878) 47 364 14.8 0.0 0.0 C06HBa0062H07.1 85862 85922 (35042) + Unknown00034 Unknown 5145 5205 (3872) 48 601 20.4 3.5 0.0 C06HBa0062H07.1 86286 86398 (34566) + TS2 Unknown 539 655 (0) 49 229 22.4 0.0 0.0 C06HBa0062H07.1 89159 89207 (31757) C Copia00113 Copia (5132) 7274 7226 50 352 20.0 1.1 1.1 C06HBa0062H07.1 91623 91713 (29251) C Gypsy00073 Gypsy (10339) 1745 1655 51 1348 22.7 0.6 0.0 C06HBa0062H07.1 91717 92033 (28931) C Gypsy00151 Gypsy (6260) 5389 5071 52 633 19.9 2.0 2.0 C06HBa0062H07.1 93462 93610 (27354) + Copia00151 Copia 8221 8369 (2392) 53 324 23.6 0.0 0.0 C06HBa0062H07.1 94170 94258 (26706) + Copia00110 Copia 2405 2493 (11639) 54 * 664 13.3 0.0 3.4 C06HBa0062H07.1 94182 94298 (26666) + TLP1 Unknown 1 113 (549) 55 571 14.1 2.2 0.0 C06HBa0062H07.1 94307 94398 (26566) + Unknown00046 Unknown 2754 2847 (7197) 56 269 29.1 7.3 6.5 C06HBa0062H07.1 97252 97497 (23467) + Gypsy00077 Gypsy 5490 5737 (376) 57 * 371 26.0 15.7 8.0 C06HBa0062H07.1 97419 97878 (23086) + Copia00089 Copia 937 1431 (10025) 58 * 483 21.9 0.0 1.9 C06HBa0062H07.1 97874 97980 (22984) + Copia00132 Copia 4805 4909 (1) 59 632 14.5 0.8 3.3 C06HBa0062H07.1 99259 99379 (21585) C Copia00110 Copia (2909) 11223 11106 60 833 21.2 3.2 0.8 C06HBa0062H07.1 99603 99849 (21115) C SONATA2 Unknown (0) 253 1 61 11691 10.1 1.4 3.6 C06HBa0062H07.1 107239 109121 (11843) C Gypsy00069 Gypsy (2479) 3534 1692 62 396 3.1 12.3 0.0 C06HBa0062H07.1 111642 111706 (9258) + Unknown00018 Unknown 2970 3042 (0) 63 * 1234 4.2 1.2 0.0 C06HBa0062H07.1 111662 111826 (9138) C Unknown00049 Unknown (4297) 4734 4568 64 35337 4.3 0.3 1.4 C06HBa0062H07.1 111828 116194 (4770) + Copia00170 Copia 4 4326 (0) 65 466 4.0 2.7 0.0 C06HBa0062H07.1 116146 116219 (4745) C Unknown00049 Unknown (1736) 7295 7220 66 * 234 6.5 0.0 0.0 C06HBa0062H07.1 116220 116250 (4714) + Copia00018 Copia 1 31 (4355) 67 659 3.5 0.0 0.0 C06HBa0062H07.1 116251 116337 (4627) + Copia00018 Copia 1 87 (4299) 67 883 12.0 1.3 2.6 C06HBa0062H07.1 119243 119396 (1568) + Copia00094 Copia 4313 4464 (1145) 68 * 1385 11.8 2.8 0.0 C06HBa0062H07.1 119263 119473 (1491) + Unknown00034 Unknown 3704 3920 (5157) 69