SW perc perc perc query position in query matching repeat position in repeat score div. del. ins. sequence begin end (left) repeat class/family begin end (left) ID 15445 0.0 0.0 0.1 C06HBa0308F14.2 1 1784 (91386) C Gypsy00085 Gypsy (1650) 1783 1 1 9819 12.1 3.2 1.4 C06HBa0308F14.2 1049 2727 (90443) C Unknown00034 Unknown (5430) 3647 1939 2 * 505 21.5 2.3 2.3 C06HBa0308F14.2 3515 3690 (89480) C Gypsy00158 Gypsy (1326) 5348 5173 3 6081 9.3 0.8 0.1 C06HBa0308F14.2 4062 4951 (88219) + Gypsy00097 Gypsy 7931 8826 (687) 4 19643 22.6 6.7 5.3 C06HBa0308F14.2 4955 11217 (81953) + Gypsy00185 Gypsy 924 7270 (2009) 5 14491 17.4 0.3 1.0 C06HBa0308F14.2 11200 14048 (79122) C Gypsy00056 Gypsy (2024) 10126 7297 6 * 4766 25.5 4.9 4.6 C06HBa0308F14.2 14049 16185 (76985) C Gypsy00125 Gypsy (707) 9373 7231 7 4694 22.0 1.9 0.1 C06HBa0308F14.2 16185 17225 (75945) + Gypsy00007 Gypsy 3902 4961 (1534) 8 * 3147 24.1 4.9 4.7 C06HBa0308F14.2 17226 18791 (74379) + Gypsy00139 Gypsy 154 7136 (2955) 9 5428 18.4 2.7 2.4 C06HBa0308F14.2 17231 18472 (74698) C Gypsy00056 Gypsy (10905) 1245 1 10 25405 17.6 2.1 1.4 C06HBa0308F14.2 18785 23980 (69190) C Gypsy00056 Gypsy (930) 11220 5988 11 5284 23.7 3.1 4.3 C06HBa0308F14.2 22556 24353 (68817) + Gypsy00118 Gypsy 413 2188 (4219) 12 * 4308 24.5 3.8 3.3 C06HBa0308F14.2 24393 25800 (67370) C Gypsy00056 Gypsy (6285) 5865 4452 11 12691 11.7 6.1 1.9 C06HBa0308F14.2 25904 28152 (65018) C Gypsy00035 Gypsy (4426) 2347 4 13 9574 13.7 3.1 1.3 C06HBa0308F14.2 26625 28343 (64827) + Unknown00034 Unknown 1913 3661 (5416) 14 * 1803 20.5 5.3 1.8 C06HBa0308F14.2 29989 30535 (62635) + Copia00205 Copia 4517 5082 (5174) 15 1585 21.4 4.1 5.8 C06HBa0308F14.2 30008 30741 (62429) C Copia00191 Copia (449) 4277 3495 16 * 392 2.2 0.0 0.0 C06HBa0308F14.2 30741 30786 (62384) + Gypsy00084 Gypsy 4798 4843 (1265) 17 * 8553 13.8 1.4 1.0 C06HBa0308F14.2 30788 32395 (60775) C Gypsy00080 Gypsy (4981) 4965 386 18 * 27809 16.2 1.8 0.9 C06HBa0308F14.2 30953 36553 (56617) + Gypsy00170 Gypsy 1 5549 (3635) 19 41377 20.6 2.8 2.7 C06HBa0308F14.2 36554 46017 (47153) C Gypsy00056 Gypsy (2670) 9480 1 20 5209 25.2 3.7 4.9 C06HBa0308F14.2 44139 46313 (46857) + Gypsy00139 Gypsy 5002 7150 (2941) 21 * 264 22.9 1.4 0.0 C06HBa0308F14.2 46636 46705 (46465) C SONATA2 Unknown (149) 104 34 22 669 15.3 1.3 2.6 C06HBa0308F14.2 50267 50420 (42750) + Unknown00046 Unknown 356 507 (9537) 23 864 25.2 4.7 4.5 C06HBa0308F14.2 51898 52342 (40828) + Unknown00050 Unknown 3362 3807 (1824) 24 1347 13.9 0.8 0.0 C06HBa0308F14.2 52924 53167 (40003) C Unknown00020 Unknown (4802) 403 158 25 510 11.5 1.3 0.0 C06HBa0308F14.2 53160 53237 (39933) + Unknown00034 Unknown 3702 3780 (5297) 26 * 463 10.8 1.3 1.3 C06HBa0308F14.2 53236 53310 (39860) + Copia00112 Copia 59 133 (8754) 27 * 2188 17.2 0.4 6.2 C06HBa0308F14.2 53317 53848 (39322) C Copia00110 Copia (11882) 2250 1750 28 1943 16.3 10.6 4.5 C06HBa0308F14.2 53850 54388 (38782) + Unknown00031 Unknown 4540 5111 (0) 29 * 5601 17.3 2.0 2.1 C06HBa0308F14.2 54112 55286 (37884) C Gypsy00059 Gypsy (7285) 1176 4 30 * 8438 20.4 3.0 3.8 C06HBa0308F14.2 54278 56414 (36756) + Gypsy00123 Gypsy 747 2867 (4880) 31 * 8473 18.6 3.3 1.1 C06HBa0308F14.2 54666 56443 (36727) + Unknown00031 Unknown 2 1818 (3293) 32 3972 22.1 5.5 2.9 C06HBa0308F14.2 56437 58207 (34963) C Gypsy00180 Gypsy (5410) 8005 543 33 * 271 25.5 1.9 2.9 C06HBa0308F14.2 58541 58645 (34525) + SHALINE7_MT Unknown 3254 3357 (2270) 34 422 16.1 0.0 2.4 C06HBa0308F14.2 61523 61605 (31565) + POTTEN2 Unknown 717 797 (0) 35 233 31.4 3.3 0.0 C06HBa0308F14.2 61676 61796 (31374) + Unknown00052 Unknown 3119 3243 (1426) 36 385 24.1 5.5 7.1 C06HBa0308F14.2 63990 64172 (28998) + Unknown00056 Unknown 2254 2433 (2676) 37 234 24.3 1.3 2.6 C06HBa0308F14.2 64333 64408 (28762) C Gypsy00177 Gypsy (4809) 5496 5422 38 * 237 33.6 4.4 1.3 C06HBa0308F14.2 64357 64582 (28588) + Unknown00052 Unknown 678 910 (3759) 39 270 16.4 2.9 2.9 C06HBa0308F14.2 64734 64802 (28368) C Gypsy00177 Gypsy (422) 9883 9815 40 * 1222 20.6 5.2 3.6 C06HBa0308F14.2 64777 65215 (27955) + Unknown00002 Unknown 4484 4929 (5052) 41 1048 28.3 5.6 3.9 C06HBa0308F14.2 65603 66323 (26847) + Gypsy00177 Gypsy 4136 8239 (87) 42 283 20.3 6.8 10.1 C06HBa0308F14.2 66339 66486 (26684) + Gypsy00177 Gypsy 5003 5145 (5160) 43 * 482 22.7 7.6 4.3 C06HBa0308F14.2 66424 66607 (26563) + Unknown00002 Unknown 6734 6923 (3058) 41 * 628 27.0 5.3 3.2 C06HBa0308F14.2 66533 66815 (26355) + Gypsy00177 Gypsy 10001 10289 (16) 44 481 26.4 6.7 6.5 C06HBa0308F14.2 67176 67823 (25347) + Unknown00002 Unknown 85 7531 (2450) 45 3285 25.9 5.7 3.7 C06HBa0308F14.2 67882 69430 (23740) C GYPSOL2_LTR Unknown (0) 1580 1 46 * 16443 23.1 3.2 2.7 C06HBa0308F14.2 68103 74053 (19117) + Gypsy00056 Gypsy 1 5959 (6191) 47 269 30.9 0.0 0.0 C06HBa0308F14.2 75853 75949 (17221) C Gypsy00205 Gypsy (7000) 4312 4216 48 * 307 20.3 0.0 0.0 C06HBa0308F14.2 75882 75950 (17220) + LSU-rRNA_Ath Unknown 307 375 (3000) 49 448 31.5 1.3 2.1 C06HBa0308F14.2 77903 78139 (15031) + LSU-rRNA_Ath Unknown 2791 3025 (350) 50 22906 19.5 2.5 1.4 C06HBa0308F14.2 80774 85988 (7182) + Gypsy00056 Gypsy 6215 12496 (1024) 51 432 21.9 1.0 1.0 C06HBa0308F14.2 86024 86120 (7050) C Gypsy00116 Gypsy (10972) 821 725 52 983 20.7 2.6 7.2 C06HBa0308F14.2 87584 87890 (5280) C Unknown00046 Unknown (9555) 489 197 53 259 25.0 0.0 0.0 C06HBa0308F14.2 87914 87985 (5185) + Gypsy00042 Gypsy 5653 5724 (1774) 54 237 26.9 6.4 7.6 C06HBa0308F14.2 87986 88070 (5100) + Unknown00038 Unknown 844 998 (8109) 55 233 32.1 1.9 10.1 C06HBa0308F14.2 88190 88456 (4714) C Gypsy00177 Gypsy (9693) 612 368 56 226 19.0 13.6 2.9 C06HBa0308F14.2 90738 90840 (2330) C Copia00153 Copia (2655) 4734 4621 57 736 22.9 6.0 3.4 C06HBa0308F14.2 90916 91213 (1957) + Gypsy00042 Gypsy 205 510 (6988) 58 * 792 30.0 8.3 6.4 C06HBa0308F14.2 91027 91891 (1279) C Unknown00002 Unknown (781) 9200 8319 59