SW perc perc perc query position in query matching repeat position in repeat score div. del. ins. sequence begin end (left) repeat class/family begin end (left) ID 605 19.2 0.8 1.6 C06HBa0309K01.1 2712 2833 (104815) C Copia00172 Copia (1314) 5313 5193 1 307 31.9 8.9 1.6 C06HBa0309K01.1 4835 5025 (102623) C Copia00151 Copia (1103) 9658 9454 2 342 15.3 2.4 9.8 C06HBa0309K01.1 10178 10300 (97348) + Gypsy00163 Gypsy 8020 8133 (614) 3 358 20.9 4.0 10.1 C06HBa0309K01.1 10852 11000 (96648) C Unknown00043 Unknown (5882) 5442 5303 4 318 5.9 12.9 2.9 C06HBa0309K01.1 11988 12014 (95634) C Unknown00046 Unknown (9845) 199 123 5 347 2.3 0.0 0.0 C06HBa0309K01.1 12015 12057 (95591) C Copia00094 Copia (1038) 4571 4529 6 54589 1.1 0.3 0.2 C06HBa0309K01.1 13850 20922 (86726) + Gypsy00009 Gypsy 1 11847 (0) 7 34250 7.1 1.1 0.7 C06HBa0309K01.1 17195 21789 (85859) C Gypsy00078 Gypsy (426) 7681 3068 8 * 407 21.8 9.2 0.0 C06HBa0309K01.1 22752 22838 (84810) C Copia00172 Copia (1312) 5315 5221 9 876 18.9 1.6 1.6 C06HBa0309K01.1 22978 23165 (84483) C SINE_SO Unknown (0) 189 2 10 831 19.8 4.0 2.0 C06HBa0309K01.1 23188 23388 (84260) C Copia00105 Copia (21) 8836 8632 11 239 16.4 0.0 0.0 C06HBa0309K01.1 23433 23499 (84149) C Gypsy00046 Gypsy (6889) 4182 4116 12 226 17.9 3.5 3.5 C06HBa0309K01.1 23500 23513 (84135) C Copia00089 Copia (5842) 5614 5561 13 1902 15.6 3.2 1.3 C06HBa0309K01.1 23788 24165 (83483) C Copia00198 Copia (5034) 3322 2938 14 253 29.2 0.0 8.1 C06HBa0309K01.1 25644 25766 (81882) + TLP1 Unknown 19 131 (531) 15 6194 11.3 0.9 0.9 C06HBa0309K01.1 33560 34516 (73132) C Gypsy00062 Gypsy (5120) 1402 446 16 * 47832 8.9 0.6 1.0 C06HBa0309K01.1 33738 42299 (65349) + Gypsy00014 Gypsy 4 6922 (0) 17 6124 11.8 1.6 2.8 C06HBa0309K01.1 41324 42411 (65237) C Copia00194 Copia (4023) 6239 5164 18 * 1489 12.6 4.7 0.4 C06HBa0309K01.1 43254 43508 (64140) + Copia00110 Copia 2401 2666 (11466) 19 275 19.2 3.9 4.8 C06HBa0309K01.1 43509 43612 (64036) + Copia00149 Copia 8170 8272 (6211) 20 355 6.8 11.9 0.0 C06HBa0309K01.1 44946 45004 (62644) C Copia00143 Copia (5143) 161 96 21 1067 7.1 0.0 0.0 C06HBa0309K01.1 45019 45159 (62489) C Copia00143 Copia (5087) 217 77 22 316 21.7 5.7 8.9 C06HBa0309K01.1 47358 47514 (60134) + Gypsy00049 Gypsy 168 319 (14211) 23 338 15.1 9.4 2.0 C06HBa0309K01.1 47977 48125 (59523) C Gypsy00011 Gypsy (4835) 3177 3018 24 2038 13.9 2.2 4.8 C06HBa0309K01.1 49249 49648 (58000) + Gypsy00011 Gypsy 4726 5115 (2897) 25 84477 1.4 0.2 0.3 C06HBa0309K01.1 51442 62686 (44962) C Gypsy00010 Gypsy (0) 9556 1 26 296 15.6 0.0 3.0 C06HBa0309K01.1 63156 63221 (44427) C Gypsy00043 Gypsy (9651) 4243 4180 27 256 16.7 0.0 3.6 C06HBa0309K01.1 63415 63470 (44178) C Gypsy00173 Gypsy (4407) 607 554 28 228 17.2 12.3 1.5 C06HBa0309K01.1 63423 63487 (44161) + Unknown00019 Unknown 11753 11824 (2809) 29 * 1799 13.4 1.1 0.7 C06HBa0309K01.1 64969 65247 (42401) + Gypsy00011 Gypsy 4838 5117 (2895) 30 240 28.6 2.4 0.8 C06HBa0309K01.1 66333 66459 (41189) C Unknown00040 Unknown (182) 4500 4372 31 729 23.0 0.4 4.1 C06HBa0309K01.1 66741 66985 (40663) C Copia00175 Copia (4462) 2584 2349 32 436 22.0 17.0 0.0 C06HBa0309K01.1 69637 69795 (37853) C Gypsy00014 Gypsy (795) 6127 5942 33 496 21.6 1.8 5.4 C06HBa0309K01.1 69963 70128 (37520) + Copia00089 Copia 3673 3832 (7624) 34 861 26.9 4.0 4.4 C06HBa0309K01.1 76866 77161 (30487) C TS2 Unknown (354) 301 7 35 370 34.6 5.2 3.7 C06HBa0309K01.1 77427 77753 (29895) C RTE1_MT Unknown (661) 2494 2163 36 668 33.1 3.7 3.5 C06HBa0309K01.1 91680 92288 (15360) + Unknown00057 Unknown 478 9036 (2288) 37 429 18.0 6.2 3.5 C06HBa0309K01.1 94627 94770 (12878) + Unknown00043 Unknown 383 530 (10794) 38 10064 11.7 5.8 3.1 C06HBa0309K01.1 96827 98638 (9010) C Gypsy00045 Gypsy (2479) 3535 1675 39 239 26.8 6.2 0.9 C06HBa0309K01.1 101456 101568 (6080) C Gypsy00202 Gypsy (12047) 2388 2270 40 395 15.3 10.1 1.0 C06HBa0309K01.1 101951 102049 (5599) C Unknown00046 Unknown (9517) 527 420 41 791 8.8 5.3 0.0 C06HBa0309K01.1 102703 102930 (4718) + HELITRON7_OS Unknown 1434 1673 (8480) 42 297 14.9 1.6 6.6 C06HBa0309K01.1 102860 102981 (4667) C MuDR1_HV Unknown (5138) 1322 1207 43 * 361 16.4 9.6 0.0 C06HBa0309K01.1 103113 103185 (4463) + Unknown00046 Unknown 421 500 (9544) 44