SW perc perc perc query position in query matching repeat position in repeat score div. del. ins. sequence begin end (left) repeat class/family begin end (left) ID 243 19.6 0.0 0.0 C06SLm0022H01.1 3 48 (100845) C Unknown00034 Unknown (3887) 5190 5145 1 5518 7.5 0.0 0.3 C06SLm0022H01.1 1496 2231 (98662) C Copia00107 Copia (2303) 734 1 2 2297 11.5 0.8 0.3 C06SLm0022H01.1 2089 2445 (98448) + Copia00190 Copia 105 463 (1543) 3 * 1725 9.8 0.0 0.0 C06SLm0022H01.1 2228 2471 (98422) C Copia00107 Copia (1826) 1211 968 4 * 1168 10.5 0.0 0.6 C06SLm0022H01.1 2473 2645 (98248) C Copia00107 Copia (2594) 443 272 4 291 14.3 0.0 0.0 C06SLm0022H01.1 18963 19011 (81882) C Gypsy00106 Gypsy (5918) 49 1 5 * 1967 7.9 6.8 0.0 C06SLm0022H01.1 18970 19247 (81646) + Gypsy00080 Gypsy 3353 3649 (6297) 6 * 23602 12.7 3.3 1.1 C06SLm0022H01.1 19224 22995 (77898) C Gypsy00170 Gypsy (4552) 3854 1 7 4018 12.1 5.2 0.3 C06SLm0022H01.1 22443 23063 (77830) + Gypsy00080 Gypsy 3350 4000 (5946) 8 * 738 29.4 5.0 4.6 C06SLm0022H01.1 24438 25001 (75892) + HATORY Unknown 1182 1934 (1931) 9 526 34.9 0.0 0.0 C06SLm0022H01.1 25874 26145 (74748) + HATORY Unknown 2598 2869 (701) 9 1402 9.4 0.0 0.5 C06SLm0022H01.1 26957 27160 (73733) + Gypsy00080 Gypsy 4062 4264 (5682) 10 309 16.7 1.4 1.4 C06SLm0022H01.1 27153 27225 (73668) C Unknown00034 Unknown (3869) 5208 5136 11 * 7831 9.8 0.7 0.0 C06SLm0022H01.1 29047 30135 (70758) + Gypsy00021 Gypsy 544 1640 (7957) 12 1010 6.3 0.0 0.0 C06SLm0022H01.1 30141 30267 (70626) C Gypsy00074 Gypsy (2266) 11825 11699 13 12722 7.7 0.8 1.0 C06SLm0022H01.1 30979 32692 (68201) + Gypsy00125 Gypsy 1197 2906 (7174) 14 308 19.8 11.5 9.7 C06SLm0022H01.1 33017 33285 (67608) + hAT-2_SD Unknown 371 644 (3424) 15 1131 22.8 12.2 5.9 C06SLm0022H01.1 33530 34293 (66600) C Copia00180 Copia (6597) 5410 4599 16 330 28.3 2.4 4.2 C06SLm0022H01.1 34391 34556 (66337) + Gypsy00178 Gypsy 3335 3497 (5594) 17 * 2662 9.9 1.1 0.0 C06SLm0022H01.1 34548 34912 (65981) + Gypsy00066 Gypsy 4006 4374 (7934) 18 449 21.8 2.2 2.9 C06SLm0022H01.1 42515 42651 (58242) C Unknown00057 Unknown (3020) 606 471 19 230 14.3 0.0 0.0 C06SLm0022H01.1 46520 46554 (54339) C RIRE8B_I Unknown (4138) 1843 1809 20 707 20.4 4.9 4.5 C06SLm0022H01.1 46603 46848 (54045) + Copia00172 Copia 727 973 (5654) 21 480 18.4 1.1 0.0 C06SLm0022H01.1 48353 48439 (52454) C TS2 Unknown (5) 650 563 22 2103 28.8 5.1 1.1 C06SLm0022H01.1 50059 50789 (50104) C Copia00133 Copia (495) 4224 3465 23 232 16.7 2.0 2.0 C06SLm0022H01.1 50972 51020 (49873) C Copia00143 Copia (5129) 175 127 24 627 20.5 0.9 0.9 C06SLm0022H01.1 57588 57700 (43193) C TS2 Unknown (5) 650 538 25 591 25.0 0.6 1.3 C06SLm0022H01.1 65946 66103 (34790) + Copia00151 Copia 8223 8379 (2382) 26 256 11.0 4.8 2.4 C06SLm0022H01.1 66405 66488 (34405) + MuDR1_HV Unknown 1236 1321 (5139) 27 * 268 11.4 3.8 0.0 C06SLm0022H01.1 66417 66495 (34398) + Gypsy00046 Gypsy 4092 4173 (6898) 28 4733 4.9 3.4 3.1 C06SLm0022H01.1 66521 67169 (33724) + Unknown00019 Unknown 48 698 (13935) 29 304 15.1 5.4 1.4 C06SLm0022H01.1 67130 67203 (33690) C Gypsy00073 Gypsy (11428) 656 580 30 * 1227 12.6 0.5 2.4 C06SLm0022H01.1 68398 68608 (32285) + Gypsy00073 Gypsy 11878 12084 (0) 31 1561 4.2 0.8 2.0 C06SLm0022H01.1 68779 69023 (31870) + Gypsy00073 Gypsy 4 245 (11839) 32 551 9.1 0.0 1.3 C06SLm0022H01.1 69022 69099 (31794) C Gypsy00073 Gypsy (121) 11963 11887 33 * 32176 0.0 0.0 0.0 C06SLm0022H01.1 71131 74668 (26225) + Gypsy00008 Gypsy 1 3538 (1365) 34 1246 12.9 6.8 1.7 C06SLm0022H01.1 77507 77742 (23151) C Gypsy00043 Gypsy (12581) 1313 1066 35 1124 18.4 7.8 5.2 C06SLm0022H01.1 77692 78035 (22858) C Copia00110 Copia (509) 13623 13271 36 * 672 23.3 8.1 11.8 C06SLm0022H01.1 77758 78191 (22702) + Unknown00019 Unknown 155 699 (13934) 37 * 799 9.8 1.5 2.9 C06SLm0022H01.1 78192 78327 (22566) C Copia00110 Copia (840) 13292 13159 38 318 9.9 2.9 0.0 C06SLm0022H01.1 79270 79359 (21534) + Gypsy00046 Gypsy 4114 6001 (1497) 39 * 5904 11.3 4.3 0.4 C06SLm0022H01.1 79348 80330 (20563) + Unknown00038 Unknown 3401 4421 (4686) 40 286 26.1 5.6 5.6 C06SLm0022H01.1 80905 81046 (19847) C HAT1_MT Unknown (4447) 142 1 41 319 19.4 5.4 7.2 C06SLm0022H01.1 83344 83454 (17439) C ATHPOGO Unknown (391) 1723 1615 42 851 17.2 5.0 3.3 C06SLm0022H01.1 84324 84503 (16390) C SINE_SO Unknown (5) 184 2 43 1496 28.8 3.9 4.8 C06SLm0022H01.1 89795 90454 (10439) + TS2 Unknown 1 654 (1) 44 252 19.7 0.0 1.6 C06SLm0022H01.1 92706 92767 (8126) C Unknown00034 Unknown (3872) 5205 5145 45