SW perc perc perc query position in query matching repeat position in repeat score div. del. ins. sequence begin end (left) repeat class/family begin end (left) ID 11849 8.7 0.2 1.3 C06SLm0134B10.1 1 1721 (139046) C Gypsy00114 Gypsy (5367) 2575 874 1 9168 21.1 6.4 5.1 C06SLm0134B10.1 18 2910 (137857) + Gypsy00112 Gypsy 4750 7680 (0) 2 * 8904 17.9 2.4 0.8 C06SLm0134B10.1 2406 4184 (136583) + Unknown00031 Unknown 3 1809 (3302) 3 * 550 22.1 4.4 0.0 C06SLm0134B10.1 4187 4322 (136445) + Gypsy00129 Gypsy 2458 2599 (5451) 4 2610 26.6 0.9 0.3 C06SLm0134B10.1 4323 5019 (135748) C Gypsy00066 Gypsy (5828) 6480 5780 5 10849 26.2 2.3 1.5 C06SLm0134B10.1 5050 8509 (132258) + Gypsy00129 Gypsy 4359 11511 (522) 4 816 27.3 2.1 1.6 C06SLm0134B10.1 8579 8948 (131819) + Gypsy00129 Gypsy 7692 12147 (0) 6 * 2187 21.5 6.1 2.8 C06SLm0134B10.1 8641 9281 (131486) C GYPSOL2_LTR Unknown (1) 1579 918 7 343 29.6 9.6 4.2 C06SLm0134B10.1 9279 9444 (131323) C Gypsy00038 Gypsy (2461) 5257 5083 8 * 1805 28.9 1.9 0.8 C06SLm0134B10.1 9573 10213 (130554) + Gypsy00066 Gypsy 4761 5408 (6900) 9 1228 32.2 0.4 1.6 C06SLm0134B10.1 10209 10706 (130061) C Gypsy00190 Gypsy (4230) 8152 7661 10 * 1875 31.5 3.3 3.7 C06SLm0134B10.1 10714 11861 (128906) C Gypsy00129 Gypsy (5095) 2955 1812 11 360 26.4 2.1 3.5 C06SLm0134B10.1 14810 14954 (125813) + Gypsy00094 Gypsy 7276 7418 (1390) 12 713 27.8 13.8 7.7 C06SLm0134B10.1 15414 16626 (124141) C Gypsy00081 Gypsy (3947) 1790 625 13 984 29.9 6.4 6.3 C06SLm0134B10.1 15575 16562 (124205) + Gypsy00139 Gypsy 4729 5717 (4374) 14 1272 28.0 4.2 6.0 C06SLm0134B10.1 16924 17906 (122861) + Gypsy00139 Gypsy 6213 7177 (2914) 14 400 23.1 5.8 8.0 C06SLm0134B10.1 18834 19059 (121708) + Unknown00054 Unknown 1933 3107 (2002) 15 1735 23.4 7.2 5.2 C06SLm0134B10.1 19063 19954 (120813) C Gypsy00046 Gypsy (1022) 10049 9140 16 312 33.6 1.4 2.0 C06SLm0134B10.1 19958 20103 (120664) C Gypsy00176 Gypsy (2729) 4899 4755 17 * 1297 36.1 1.9 1.2 C06SLm0134B10.1 19975 20908 (119859) + Gypsy00027 Gypsy 5126 6066 (1866) 18 4291 26.8 0.5 0.9 C06SLm0134B10.1 21137 22305 (118462) + Gypsy00127 Gypsy 2423 3587 (2960) 19 3852 20.3 2.8 0.8 C06SLm0134B10.1 22313 23243 (117524) C Unknown00054 Unknown (2698) 2793 1844 20 296 25.0 0.0 0.0 C06SLm0134B10.1 23183 23250 (117517) C Gypsy00178 Gypsy (547) 8544 8477 21 * 1366 27.5 6.3 8.7 C06SLm0134B10.1 23279 24418 (116349) C Gypsy00052 Gypsy (5) 5802 4690 22 16630 14.0 0.8 0.9 C06SLm0134B10.1 26821 31907 (108860) + Gypsy00180 Gypsy 5900 11115 (2300) 23 274 30.8 0.0 0.0 C06SLm0134B10.1 32952 33029 (107738) C Copia00074 Copia (4190) 248 171 24 6388 25.9 5.7 5.5 C06SLm0134B10.1 40850 44090 (96677) C Gypsy00177 Gypsy (1913) 8392 5145 25 1463 34.9 4.6 2.7 C06SLm0134B10.1 50190 51680 (89087) + Copia00211 Copia 68 1586 (2584) 26 551 36.4 4.9 5.3 C06SLm0134B10.1 50196 52570 (88197) C COP20_I_MT Unknown (19) 4149 1783 27 * 374 34.5 3.9 2.9 C06SLm0134B10.1 53102 53411 (87356) C ATCOPIA23_I Unknown (3048) 1045 733 28 316 32.6 1.1 0.6 C06SLm0134B10.1 53497 53675 (87092) + Copia00165 Copia 3445 3624 (458) 29 312 31.6 7.0 4.8 C06SLm0134B10.1 53698 54070 (86697) + Copia00211 Copia 3746 4126 (44) 30 890 28.8 8.0 6.5 C06SLm0134B10.1 57076 57995 (82772) + Copia00089 Copia 533 1466 (9990) 31 5122 24.7 2.9 3.4 C06SLm0134B10.1 58192 59799 (80968) + Gypsy00006 Gypsy 907 2505 (5274) 32 300 28.6 3.0 1.0 C06SLm0134B10.1 59870 59968 (80799) + Gypsy00046 Gypsy 4647 4747 (6324) 33 1246 12.1 9.6 2.0 C06SLm0134B10.1 60589 60882 (79885) C Copia00198 Copia (7578) 778 251 34 614 12.3 0.9 1.7 C06SLm0134B10.1 61328 61443 (79324) C Copia00198 Copia (5489) 2867 2753 35 * 86354 0.0 0.0 0.0 C06SLm0134B10.1 61382 71959 (68808) + Gypsy00109 Gypsy 1 10578 (0) 36 1510 16.2 6.1 5.6 C06SLm0134B10.1 71873 72264 (68503) C Copia00198 Copia (7503) 853 460 37 * 1124 5.3 0.0 0.0 C06SLm0134B10.1 72590 72758 (68009) C Gypsy00107 Gypsy (0) 10899 10731 38 1784 5.3 0.4 0.8 C06SLm0134B10.1 74540 74785 (65982) + Gypsy00120 Gypsy 5364 5608 (760) 39 * 38155 10.7 1.4 0.6 C06SLm0134B10.1 74783 80385 (60382) C Gypsy00009 Gypsy (341) 5647 2 40 * 48039 1.6 0.1 0.5 C06SLm0134B10.1 75536 81577 (59190) + Gypsy00108 Gypsy 1 5276 (0) 41 1392 23.0 1.8 3.1 C06SLm0134B10.1 84774 85221 (55546) C Copia00145 Copia (11972) 447 6 42 244 32.7 0.9 0.9 C06SLm0134B10.1 85435 85545 (55222) C Gypsy00179 Gypsy (4913) 893 783 43 322 25.2 3.8 7.5 C06SLm0134B10.1 86179 86405 (54362) C Gypsy00077 Gypsy (317) 6332 137 44 793 24.8 6.9 4.2 C06SLm0134B10.1 86973 87423 (53344) C Gypsy00155 Gypsy (681) 5968 5506 45 637 23.6 4.8 8.3 C06SLm0134B10.1 87090 87463 (53304) + Gypsy00191 Gypsy 3663 4023 (225) 46 * 459 30.2 7.5 5.0 C06SLm0134B10.1 87748 88068 (52699) + Gypsy00046 Gypsy 4202 4530 (6541) 47 322 24.0 8.4 2.8 C06SLm0134B10.1 88258 88364 (52403) C Gypsy00127 Gypsy (53) 6494 6382 48 239 13.9 18.7 12.2 C06SLm0134B10.1 91538 91660 (49107) C Unknown00002 Unknown (2606) 7375 7245 49 299 23.5 5.5 6.2 C06SLm0134B10.1 92650 92814 (47953) + Gypsy00025 Gypsy 316 7479 (19) 50 * 476 28.4 3.3 4.5 C06SLm0134B10.1 92726 92968 (47799) C Unknown00002 Unknown (9715) 266 27 51 411 18.7 2.8 1.8 C06SLm0134B10.1 93467 93575 (47192) C Unknown00002 Unknown (5057) 4924 4815 52 2190 32.4 2.2 1.6 C06SLm0134B10.1 93799 94730 (46037) + Unknown00016 Unknown 2799 3736 (1245) 53 445 18.5 7.8 6.5 C06SLm0134B10.1 95142 95332 (45435) C Gypsy00046 Gypsy (5257) 1352 200 54 297 26.7 9.8 3.8 C06SLm0134B10.1 97121 97308 (43459) + Gypsy00033 Gypsy 245 10055 (940) 55 * 366 22.8 2.0 0.0 C06SLm0134B10.1 97226 97326 (43441) C Gypsy00026 Gypsy (354) 6389 6287 56 276 29.4 2.1 5.8 C06SLm0134B10.1 97327 97412 (43355) C Unknown00052 Unknown (285) 4383 4204 57 247 23.1 6.1 12.2 C06SLm0134B10.1 97985 98181 (42586) + Unknown00045 Unknown 1555 1739 (2785) 58 293 24.0 10.0 1.6 C06SLm0134B10.1 98731 98875 (41892) + Gypsy00196 Gypsy 152 343 (4359) 59 * 321 25.8 5.0 3.0 C06SLm0134B10.1 98783 98882 (41885) C Gypsy00020 Gypsy (63) 6179 6078 60 13904 8.1 1.0 1.7 C06SLm0134B10.1 100948 102966 (37801) C Copia00145 Copia (4703) 7716 5713 61 2200 7.6 0.4 0.5 C06SLm0134B10.1 102962 103488 (37279) C Copia00145 Copia (11206) 1213 640 62 * 3573 5.9 0.4 0.0 C06SLm0134B10.1 103484 103956 (36811) + Copia00107 Copia 737 1211 (1826) 63 * 5437 7.8 0.1 0.3 C06SLm0134B10.1 103953 104694 (36073) + Copia00107 Copia 1 741 (2296) 64 4236 8.6 0.9 0.5 C06SLm0134B10.1 104685 105327 (35440) C Copia00145 Copia (11770) 649 4 62 * 1497 13.4 0.4 0.0 C06SLm0134B10.1 106678 106938 (33829) + Copia00141 Copia 4419 4680 (0) 65 1632 11.3 0.8 0.0 C06SLm0134B10.1 106947 107202 (33565) + Copia00168 Copia 4397 4654 (2) 66 678 11.8 1.7 0.0 C06SLm0134B10.1 107307 107425 (33342) C Copia00146 Copia (1) 2165 2045 67 * 41476 0.7 0.2 0.1 C06SLm0134B10.1 107416 112363 (28404) + Copia00141 Copia 1 4680 (0) 68 449 9.8 0.0 0.0 C06SLm0134B10.1 112478 112559 (28208) + Copia00005 Copia 6 87 (4804) 69 7610 19.9 5.1 7.4 C06SLm0134B10.1 112883 115031 (25736) C Unknown00034 Unknown (5039) 4038 1940 70 * 59118 10.6 2.4 1.1 C06SLm0134B10.1 113190 122030 (18737) C Gypsy00073 Gypsy (238) 11846 2893 71 1159 18.2 14.3 3.6 C06SLm0134B10.1 121757 122064 (18703) + Gypsy00182 Gypsy 12 352 (5808) 72 * 267 17.5 2.5 7.9 C06SLm0134B10.1 125290 125318 (15449) + Gypsy00046 Gypsy 4112 5315 (2183) 73 297 20.2 1.0 2.1 C06SLm0134B10.1 125319 125414 (15353) C GYCUME1_LTR Unknown (2228) 418 324 74 267 17.5 2.5 7.9 C06SLm0134B10.1 125415 125428 (15339) + Gypsy00046 Gypsy 5316 5874 (1624) 73 4011 20.2 2.3 2.4 C06SLm0134B10.1 125597 126591 (14176) + Gypsy00033 Gypsy 6326 7376 (3619) 75 1946 22.7 3.8 4.6 C06SLm0134B10.1 126504 127626 (13141) + Unknown00045 Unknown 883 2043 (2481) 76 * 2798 24.3 4.8 1.2 C06SLm0134B10.1 128215 128984 (11783) + Gypsy00056 Gypsy 6114 6911 (5239) 77 * 8561 15.9 1.1 0.4 C06SLm0134B10.1 128984 130587 (10180) C Gypsy00114 Gypsy (5454) 2488 874 78 * 9668 21.8 5.5 4.4 C06SLm0134B10.1 130573 133439 (7328) + Gypsy00123 Gypsy 376 6595 (1085) 79 * 26906 14.2 2.1 2.9 C06SLm0134B10.1 131401 137432 (3335) C Gypsy00114 Gypsy (0) 7942 658 80 229 19.4 5.3 4.0 C06SLm0134B10.1 139439 139513 (1254) C Gypsy00013 Gypsy (8328) 84 9 81 225 31.4 3.5 3.5 C06SLm0134B10.1 140069 140210 (557) + Gypsy00125 Gypsy 8721 8862 (1218) 82 * 235 26.1 3.6 5.8 C06SLm0134B10.1 140099 140358 (409) C Gypsy00129 Gypsy (220) 7830 7533 83 392 16.2 1.2 0.0 C06SLm0134B10.1 140688 140767 (0) + Gypsy00033 Gypsy 6217 6297 (4698) 84