##gff-version 3
##sequence-region C09SLe0009I15.1 1 94090
C09SLe0009I15.1	GenomeThreader_SGN_E_tomato_potato	match	14428	14836	0.924	-	0	ID=SGN-E241790_alignment_1;Target=SGN-E241790 1 409 +
C09SLe0009I15.1	GenomeThreader_SGN_E_tomato_potato	match_part	14428	14836	0.924	-	0	ID=GTH_SGN_E_tom_potato_match_part_1;Target=SGN-E241790 1 409 +;Parent=SGN-E241790_alignment_1
C09SLe0009I15.1	GenomeThreader_SGN_E_tomato_potato	match	16738	17520	0.926	-	0	ID=SGN-E351082_alignment_1;Target=SGN-E351082 1 778 +
C09SLe0009I15.1	GenomeThreader_SGN_E_tomato_potato	match_part	16738	17520	0.926	-	0	ID=GTH_SGN_E_tom_potato_match_part_2;Target=SGN-E351082 1 778 +;Parent=SGN-E351082_alignment_1
C09SLe0009I15.1	GenomeThreader_SGN_E_tomato_potato	match	27354	28116	0.965	-	0	ID=SGN-E211563_alignment_1;Target=SGN-E211563 1 765 +
C09SLe0009I15.1	GenomeThreader_SGN_E_tomato_potato	match_part	27354	28116	0.965	-	0	ID=GTH_SGN_E_tom_potato_match_part_3;Target=SGN-E211563 1 765 +;Parent=SGN-E211563_alignment_1
C09SLe0009I15.1	GenomeThreader_SGN_E_tomato_potato	match	27388	27786	0.970	-	0	ID=SGN-E200850_alignment_1;Target=SGN-E200850 1 399 +
C09SLe0009I15.1	GenomeThreader_SGN_E_tomato_potato	match_part	27388	27786	0.970	-	0	ID=GTH_SGN_E_tom_potato_match_part_4;Target=SGN-E200850 1 399 +;Parent=SGN-E200850_alignment_1
C09SLe0009I15.1	GenomeThreader_SGN_E_tomato_potato	match	27520	28089	0.954	-	0	ID=SGN-E201786_alignment_1;Target=SGN-E201786 1 571 +
C09SLe0009I15.1	GenomeThreader_SGN_E_tomato_potato	match_part	27520	28089	0.954	-	0	ID=GTH_SGN_E_tom_potato_match_part_5;Target=SGN-E201786 1 571 +;Parent=SGN-E201786_alignment_1
C09SLe0009I15.1	GenomeThreader_SGN_E_tomato_potato	match	27705	28331	0.960	-	0	ID=SGN-E209835_alignment_1;Target=SGN-E209835 1 628 +
C09SLe0009I15.1	GenomeThreader_SGN_E_tomato_potato	match_part	27705	28331	0.960	-	0	ID=GTH_SGN_E_tom_potato_match_part_6;Target=SGN-E209835 1 628 +;Parent=SGN-E209835_alignment_1
C09SLe0009I15.1	GenomeThreader_SGN_E_tomato_potato	match	27730	28281	0.944	-	0	ID=SGN-E299938_alignment_1;Target=SGN-E299938 1 554 +
C09SLe0009I15.1	GenomeThreader_SGN_E_tomato_potato	match_part	27730	28281	0.944	-	0	ID=GTH_SGN_E_tom_potato_match_part_7;Target=SGN-E299938 1 554 +;Parent=SGN-E299938_alignment_1
C09SLe0009I15.1	GenomeThreader_SGN_E_tomato_potato	match	27735	28371	0.959	-	0	ID=SGN-E205887_alignment_1;Target=SGN-E205887 1 638 +
C09SLe0009I15.1	GenomeThreader_SGN_E_tomato_potato	match_part	27735	28371	0.959	-	0	ID=GTH_SGN_E_tom_potato_match_part_8;Target=SGN-E205887 1 638 +;Parent=SGN-E205887_alignment_1
C09SLe0009I15.1	GenomeThreader_SGN_E_tomato_potato	match	27757	28331	0.960	-	0	ID=SGN-E209830_alignment_1;Target=SGN-E209830 1 576 +
C09SLe0009I15.1	GenomeThreader_SGN_E_tomato_potato	match_part	27757	28331	0.960	-	0	ID=GTH_SGN_E_tom_potato_match_part_9;Target=SGN-E209830 1 576 +;Parent=SGN-E209830_alignment_1
C09SLe0009I15.1	GenomeThreader_SGN_E_tomato_potato	match	28237	28947	0.958	-	0	ID=SGN-E331947_alignment_1;Target=SGN-E331947 1 711 +
C09SLe0009I15.1	GenomeThreader_SGN_E_tomato_potato	match_part	28237	28947	0.958	-	0	ID=GTH_SGN_E_tom_potato_match_part_10;Target=SGN-E331947 1 711 +;Parent=SGN-E331947_alignment_1
C09SLe0009I15.1	GenomeThreader_SGN_E_tomato_potato	match	30332	30700	0.921	-	0	ID=SGN-E332350_alignment_1;Target=SGN-E332350 1 367 +
C09SLe0009I15.1	GenomeThreader_SGN_E_tomato_potato	match_part	30332	30700	0.921	-	0	ID=GTH_SGN_E_tom_potato_match_part_11;Target=SGN-E332350 1 367 +;Parent=SGN-E332350_alignment_1
C09SLe0009I15.1	GenomeThreader_SGN_E_tomato_potato	match	44996	45235	0.929	-	0	ID=SGN-E298763_alignment_1;Target=SGN-E298763 1 240 +
C09SLe0009I15.1	GenomeThreader_SGN_E_tomato_potato	match_part	44996	45235	0.929	-	0	ID=GTH_SGN_E_tom_potato_match_part_12;Target=SGN-E298763 1 240 +;Parent=SGN-E298763_alignment_1
C09SLe0009I15.1	GenomeThreader_SGN_E_tomato_potato	match	44997	45236	0.929	-	0	ID=SGN-E372869_alignment_1;Target=SGN-E372869 1 240 +
C09SLe0009I15.1	GenomeThreader_SGN_E_tomato_potato	match_part	44997	45236	0.929	-	0	ID=GTH_SGN_E_tom_potato_match_part_13;Target=SGN-E372869 1 240 +;Parent=SGN-E372869_alignment_1
C09SLe0009I15.1	GenomeThreader_SGN_E_tomato_potato	match	44997	45235	0.929	-	0	ID=SGN-E372870_alignment_1;Target=SGN-E372870 1 239 +
C09SLe0009I15.1	GenomeThreader_SGN_E_tomato_potato	match_part	44997	45235	0.929	-	0	ID=GTH_SGN_E_tom_potato_match_part_14;Target=SGN-E372870 1 239 +;Parent=SGN-E372870_alignment_1
C09SLe0009I15.1	GenomeThreader_SGN_E_tomato_potato	match	44997	45235	0.929	-	0	ID=SGN-E378778_alignment_1;Target=SGN-E378778 1 239 +
C09SLe0009I15.1	GenomeThreader_SGN_E_tomato_potato	match_part	44997	45235	0.929	-	0	ID=GTH_SGN_E_tom_potato_match_part_15;Target=SGN-E378778 1 239 +;Parent=SGN-E378778_alignment_1
C09SLe0009I15.1	GenomeThreader_SGN_E_tomato_potato	gene	14428	14836	.	-	0	ID=GTH_SGN_E_tom_potato_gene_1
C09SLe0009I15.1	GenomeThreader_SGN_E_tomato_potato	mRNA	14428	14836	.	-	0	ID=GTH_SGN_E_tom_potato_gene_1_AGS_1;Parent=GTH_SGN_E_tom_potato_gene_1
C09SLe0009I15.1	GenomeThreader_SGN_E_tomato_potato	exon	14428	14836	0.924	-	0	ID=GTH_SGN_E_tom_potato_exon_1;Parent=GTH_SGN_E_tom_potato_gene_1_AGS_1
C09SLe0009I15.1	GenomeThreader_SGN_E_tomato_potato	gene	16738	17520	.	-	0	ID=GTH_SGN_E_tom_potato_gene_2
C09SLe0009I15.1	GenomeThreader_SGN_E_tomato_potato	mRNA	16738	17520	.	-	0	ID=GTH_SGN_E_tom_potato_gene_2_AGS_1;Parent=GTH_SGN_E_tom_potato_gene_2
C09SLe0009I15.1	GenomeThreader_SGN_E_tomato_potato	exon	16738	17520	0.926	-	0	ID=GTH_SGN_E_tom_potato_exon_2;Parent=GTH_SGN_E_tom_potato_gene_2_AGS_1
C09SLe0009I15.1	GenomeThreader_SGN_E_tomato_potato	gene	27354	28947	.	-	0	ID=GTH_SGN_E_tom_potato_gene_3
C09SLe0009I15.1	GenomeThreader_SGN_E_tomato_potato	mRNA	27354	28947	.	-	0	ID=GTH_SGN_E_tom_potato_gene_3_AGS_1;Parent=GTH_SGN_E_tom_potato_gene_3
C09SLe0009I15.1	GenomeThreader_SGN_E_tomato_potato	exon	27354	28947	0.965	-	0	ID=GTH_SGN_E_tom_potato_exon_3;Parent=GTH_SGN_E_tom_potato_gene_3_AGS_1
C09SLe0009I15.1	GenomeThreader_SGN_E_tomato_potato	gene	30332	30700	.	-	0	ID=GTH_SGN_E_tom_potato_gene_4
C09SLe0009I15.1	GenomeThreader_SGN_E_tomato_potato	mRNA	30332	30700	.	-	0	ID=GTH_SGN_E_tom_potato_gene_4_AGS_1;Parent=GTH_SGN_E_tom_potato_gene_4
C09SLe0009I15.1	GenomeThreader_SGN_E_tomato_potato	exon	30332	30700	0.921	-	0	ID=GTH_SGN_E_tom_potato_exon_4;Parent=GTH_SGN_E_tom_potato_gene_4_AGS_1
C09SLe0009I15.1	GenomeThreader_SGN_E_tomato_potato	gene	44996	45236	.	-	0	ID=GTH_SGN_E_tom_potato_gene_5
C09SLe0009I15.1	GenomeThreader_SGN_E_tomato_potato	mRNA	44996	45236	.	-	0	ID=GTH_SGN_E_tom_potato_gene_5_AGS_1;Parent=GTH_SGN_E_tom_potato_gene_5
C09SLe0009I15.1	GenomeThreader_SGN_E_tomato_potato	exon	44996	45236	0.929	-	0	ID=GTH_SGN_E_tom_potato_exon_5;Parent=GTH_SGN_E_tom_potato_gene_5_AGS_1
C09SLe0009I15.1	RepeatMasker	nucleotide_motif	1	144	946	+	0	ID=Gypsy00032_alignment_1;Target=Gypsy00032 730 873 +
C09SLe0009I15.1	RepeatMasker	nucleotide_motif	2360	2477	329	-	0	ID=Gypsy00177_alignment_1;Target=Gypsy00177 884 994 -
C09SLe0009I15.1	RepeatMasker	nucleotide_motif	4142	5071	4811	-	0	ID=Copia00183_alignment_1;Target=Copia00183 281 1216 -
C09SLe0009I15.1	RepeatMasker	nucleotide_motif	5045	5205	751	-	0	ID=Copia00183_alignment_2;Target=Copia00183 9 166 -
C09SLe0009I15.1	RepeatMasker	nucleotide_motif	11493	11563	259	-	0	ID=HELMET3_alignment_1;Target=HELMET3 3706 6385 -
C09SLe0009I15.1	RepeatMasker	nucleotide_motif	11547	19654	31630	+	0	ID=Unknown00013_alignment_1;Target=Unknown00013 1 3748 +
C09SLe0009I15.1	RepeatMasker	nucleotide_motif	21137	21291	592	-	0	ID=Gypsy00077_alignment_1;Target=Gypsy00077 5826 5994 -
C09SLe0009I15.1	RepeatMasker	nucleotide_motif	21338	21382	244	-	0	ID=Gypsy00077_alignment_2;Target=Gypsy00077 5907 5951 -
C09SLe0009I15.1	RepeatMasker	nucleotide_motif	21375	21502	533	-	0	ID=Gypsy00077_alignment_3;Target=Gypsy00077 5826 5952 -
C09SLe0009I15.1	RepeatMasker	nucleotide_motif	21381	21603	493	+	0	ID=Unknown00029_alignment_1;Target=Unknown00029 5147 5373 +
C09SLe0009I15.1	RepeatMasker	nucleotide_motif	23615	23694	296	+	0	ID=Gypsy00029_alignment_1;Target=Gypsy00029 5529 5610 +
C09SLe0009I15.1	RepeatMasker	nucleotide_motif	24142	24226	269	-	0	ID=Gypsy00071_alignment_1;Target=Gypsy00071 2556 2632 -
C09SLe0009I15.1	RepeatMasker	nucleotide_motif	26835	26924	590	+	0	ID=Copia00053_alignment_1;Target=Copia00053 4981 5070 +
C09SLe0009I15.1	RepeatMasker	nucleotide_motif	26912	26976	227	-	0	ID=Copia00063_alignment_1;Target=Copia00063 16 79 -
C09SLe0009I15.1	RepeatMasker	nucleotide_motif	27112	32184	44641	+	0	ID=Copia00053_alignment_2;Target=Copia00053 1 5073 +
C09SLe0009I15.1	RepeatMasker	nucleotide_motif	32078	32233	395	-	0	ID=Copia00063_alignment_2;Target=Copia00063 16 184 -
C09SLe0009I15.1	RepeatMasker	nucleotide_motif	37019	37072	227	-	0	ID=HELMET3_alignment_2;Target=HELMET3 3706 3760 -
C09SLe0009I15.1	RepeatMasker	nucleotide_motif	37056	41591	34197	+	0	ID=Unknown00013_alignment_2;Target=Unknown00013 1 3748 +
C09SLe0009I15.1	RepeatMasker	nucleotide_motif	42844	43064	613	-	0	ID=Copia00151_alignment_1;Target=Copia00151 8221 8434 -
C09SLe0009I15.1	RepeatMasker	nucleotide_motif	44878	45282	2018	-	0	ID=TLC1_LTR_alignment_1;Target=TLC1_LTR 189 579 -
C09SLe0009I15.1	RepeatMasker	nucleotide_motif	44958	48670	8750	-	0	ID=Copia00003_alignment_1;Target=Copia00003 978 4673 -
C09SLe0009I15.1	RepeatMasker	nucleotide_motif	45506	49703	38027	+	0	ID=Copia00010_alignment_1;Target=Copia00010 1 4198 +
C09SLe0009I15.1	RepeatMasker	nucleotide_motif	49706	49938	1132	-	0	ID=TLC1_LTR_alignment_2;Target=TLC1_LTR 189 428 -
C09SLe0009I15.1	RepeatMasker	nucleotide_motif	49939	49968	799	-	0	ID=Copia00003_alignment_2;Target=Copia00003 4300 4579 -
C09SLe0009I15.1	RepeatMasker	nucleotide_motif	51423	53780	5435	-	0	ID=Unknown00029_alignment_2;Target=Unknown00029 3373 5709 -
C09SLe0009I15.1	RepeatMasker	nucleotide_motif	62894	62978	310	+	0	ID=Copia00181_alignment_1;Target=Copia00181 1785 1877 +
C09SLe0009I15.1	RepeatMasker	nucleotide_motif	62925	62982	331	+	0	ID=HELITRON7_OS_alignment_1;Target=HELITRON7_OS 1629 1686 +
C09SLe0009I15.1	RepeatMasker	nucleotide_motif	62983	63005	327	-	0	ID=Copia00181_alignment_2;Target=Copia00181 1789 1871 -
C09SLe0009I15.1	RepeatMasker	nucleotide_motif	63039	63352	2386	+	0	ID=Unknown00034_alignment_1;Target=Unknown00034 3701 4018 +
C09SLe0009I15.1	RepeatMasker	nucleotide_motif	63574	63646	313	-	0	ID=Copia00105_alignment_1;Target=Copia00105 7473 7542 -
C09SLe0009I15.1	RepeatMasker	nucleotide_motif	63582	63698	475	-	0	ID=HELITRON7_OS_alignment_2;Target=HELITRON7_OS 1571 1690 -
C09SLe0009I15.1	RepeatMasker	nucleotide_motif	63960	64082	760	-	0	ID=Copia00094_alignment_1;Target=Copia00094 4465 4583 -
C09SLe0009I15.1	RepeatMasker	nucleotide_motif	63984	64290	2319	-	0	ID=Unknown00034_alignment_2;Target=Unknown00034 3705 4016 -
C09SLe0009I15.1	RepeatMasker	nucleotide_motif	64342	64499	406	-	0	ID=Copia00089_alignment_1;Target=Copia00089 3680 3833 -
C09SLe0009I15.1	RepeatMasker	nucleotide_motif	64653	64738	234	-	0	ID=Gypsy00062_alignment_1;Target=Gypsy00062 421 518 -
C09SLe0009I15.1	RepeatMasker	nucleotide_motif	67410	67466	284	+	0	ID=SZ-4_alignment_1;Target=SZ-4 5523 5577 +
C09SLe0009I15.1	RepeatMasker	nucleotide_motif	77346	77425	278	-	0	ID=Copia00151_alignment_2;Target=Copia00151 8285 8372 -
C09SLe0009I15.1	RepeatMasker	nucleotide_motif	83571	84495	1476	+	0	ID=Copia00089_alignment_2;Target=Copia00089 2003 2944 +
C09SLe0009I15.1	RepeatMasker	nucleotide_motif	85165	85745	1911	+	0	ID=Gypsy00191_alignment_1;Target=Gypsy00191 3272 3829 +
C09SLe0009I15.1	RepeatMasker	nucleotide_motif	85743	86260	2942	-	0	ID=POTTEN1_alignment_1;Target=POTTEN1 598 1109 -
C09SLe0009I15.1	RepeatMasker	nucleotide_motif	88731	88864	428	-	0	ID=HELITRON7_OS_alignment_3;Target=HELITRON7_OS 1252 1681 -
C09SLe0009I15.1	RepeatMasker	nucleotide_motif	89544	89921	2663	+	0	ID=Gypsy00107_alignment_1;Target=Gypsy00107 8846 9220 +
C09SLe0009I15.1	BLAST_tomato_bacs	match	46449	49708	4117	+	0	ID=C00HBa0076I13.1_fwd_alignment_1;blast_gaps=10;Target=clone-C00HBa0076I13.1 59605 62863 +;blast_percent_identity=91.25;blast_mismatches=269;blast_evalue=0.0
C09SLe0009I15.1	BLAST_tomato_bacs	match	38006	39023	874	+	0	ID=C00HBa0332B10.1_rev_alignment_1;blast_gaps=4;Target=clone-C00HBa0332B10.1 47724 48740 -;blast_percent_identity=86.18;blast_mismatches=136;blast_evalue=0.0
C09SLe0009I15.1	BLAST_tomato_bacs	match	12498	13522	888	+	0	ID=C00HBa0332B10.1_rev_alignment_2;blast_gaps=4;Target=clone-C00HBa0332B10.1 47717 48740 -;blast_percent_identity=86.27;blast_mismatches=136;blast_evalue=0.0
C09SLe0009I15.1	BLAST_tomato_bacs	match	16068	17092	912	+	0	ID=C00HBa0332B10.1_rev_alignment_3;blast_gaps=4;Target=clone-C00HBa0332B10.1 47717 48740 -;blast_percent_identity=86.56;blast_mismatches=133;blast_evalue=0.0
C09SLe0009I15.1	BLAST_tomato_bacs	match	29592	30689	866	+	0	ID=C01HBa0033C15.1_fwd_alignment_1;blast_gaps=5;Target=clone-C01HBa0033C15.1 1129 2221 +;blast_percent_identity=85.35;blast_mismatches=154;blast_evalue=0.0
C09SLe0009I15.1	BLAST_tomato_bacs	match	29584	32218	4209	+	0	ID=C02HBa0054K23.1_rev_alignment_1;blast_gaps=8;Target=clone-C02HBa0054K23.1 66371 69017 -;blast_percent_identity=95.40;blast_mismatches=104;blast_evalue=0.0
C09SLe0009I15.1	BLAST_tomato_bacs	match	27308	29584	3753	+	0	ID=C02HBa0054K23.1_rev_alignment_2;blast_gaps=2;Target=clone-C02HBa0054K23.1 69005 71288 -;blast_percent_identity=95.75;blast_mismatches=90;blast_evalue=0.0
C09SLe0009I15.1	BLAST_tomato_bacs	match	28246	29571	2145	+	0	ID=C02HBa0146O12.1_rev_alignment_1;blast_gaps=2;Target=clone-C02HBa0146O12.1 30872 32204 -;blast_percent_identity=95.35;blast_mismatches=55;blast_evalue=0.0
C09SLe0009I15.1	BLAST_tomato_bacs	match	29590	31418	3015	+	0	ID=C02HBa0146O12.1_rev_alignment_2;blast_gaps=2;Target=clone-C02HBa0146O12.1 29029 30857 -;blast_percent_identity=96.12;blast_mismatches=69;blast_evalue=0.0
C09SLe0009I15.1	BLAST_tomato_bacs	match	44878	49708	6597	+	0	ID=C02HBa0163K16.2_rev_alignment_1;blast_gaps=11;Target=clone-C02HBa0163K16.2 108972 113808 -;blast_percent_identity=92.54;blast_mismatches=345;blast_evalue=0.0
C09SLe0009I15.1	BLAST_tomato_bacs	match	44877	49706	6803	+	0	ID=C02HBa0198A03.2_fwd_alignment_1;blast_gaps=13;Target=clone-C02HBa0198A03.2 125057 129880 +;blast_percent_identity=93.19;blast_mismatches=315;blast_evalue=0.0
C09SLe0009I15.1	BLAST_tomato_bacs	match	30918	32218	1865	+	0	ID=C02SLm0064E19.2_fwd_alignment_1;blast_gaps=9;Target=clone-C02SLm0064E19.2 25883 27192 +;blast_percent_identity=93.38;blast_mismatches=68;blast_evalue=0.0
C09SLe0009I15.1	BLAST_tomato_bacs	match	28524	29584	1558	+	0	ID=C02SLm0064E19.2_fwd_alignment_2;blast_gaps=4;Target=clone-C02SLm0064E19.2 23502 24554 +;blast_percent_identity=93.61;blast_mismatches=54;blast_evalue=0.0
C09SLe0009I15.1	BLAST_tomato_bacs	match	29584	30928	1959	+	0	ID=C02SLm0064E19.2_fwd_alignment_3;blast_gaps=4;Target=clone-C02SLm0064E19.2 24542 25881 +;blast_percent_identity=93.91;blast_mismatches=75;blast_evalue=0.0
C09SLe0009I15.1	BLAST_tomato_bacs	match	13248	14848	983	+	0	ID=C02SLm0065K08.2_fwd_alignment_1;blast_gaps=4;Target=clone-C02SLm0065K08.2 47755 49354 +;blast_percent_identity=82.97;blast_mismatches=268;blast_evalue=0.0
C09SLe0009I15.1	BLAST_tomato_bacs	match	16818	18420	989	+	0	ID=C02SLm0065K08.2_fwd_alignment_2;blast_gaps=3;Target=clone-C02SLm0065K08.2 47755 49354 +;blast_percent_identity=82.97;blast_mismatches=270;blast_evalue=0.0
C09SLe0009I15.1	BLAST_tomato_bacs	match	38756	40358	997	+	0	ID=C02SLm0065K08.2_fwd_alignment_3;blast_gaps=3;Target=clone-C02SLm0065K08.2 47755 49354 +;blast_percent_identity=83.03;blast_mismatches=269;blast_evalue=0.0
C09SLe0009I15.1	BLAST_tomato_bacs	match	30475	32368	2928	+	0	ID=C03HBa0030O03.1_rev_alignment_1;blast_gaps=5;Target=clone-C03HBa0030O03.1 78070 79976 -;blast_percent_identity=94.71;blast_mismatches=86;blast_evalue=0.0
C09SLe0009I15.1	BLAST_tomato_bacs	match	16068	18438	3124	+	0	ID=C03HBa0127K18.1_fwd_alignment_1;blast_gaps=5;Target=clone-C03HBa0127K18.1 106397 108769 +;blast_percent_identity=91.79;blast_mismatches=189;blast_evalue=0.0
C09SLe0009I15.1	BLAST_tomato_bacs	match	12498	14866	3174	+	0	ID=C03HBa0127K18.1_fwd_alignment_2;blast_gaps=6;Target=clone-C03HBa0127K18.1 106397 108769 +;blast_percent_identity=92.08;blast_mismatches=180;blast_evalue=0.0
C09SLe0009I15.1	BLAST_tomato_bacs	match	38006	40376	3196	+	0	ID=C03HBa0127K18.1_fwd_alignment_3;blast_gaps=5;Target=clone-C03HBa0127K18.1 106397 108769 +;blast_percent_identity=92.17;blast_mismatches=180;blast_evalue=0.0
C09SLe0009I15.1	BLAST_tomato_bacs	match	29592	30796	420	+	0	ID=C04HBa0031H05.1_rev_alignment_1;blast_gaps=9;Target=clone-C04HBa0031H05.1 8796 9997 -;blast_percent_identity=80.13;blast_mismatches=231;blast_evalue=2e-114
C09SLe0009I15.1	BLAST_tomato_bacs	match	27308	29137	2137	+	0	ID=C04HBa0230N10.1_rev_alignment_1;blast_gaps=9;Target=clone-C04HBa0230N10.1 111437 113271 -;blast_percent_identity=90.05;blast_mismatches=168;blast_evalue=0.0
C09SLe0009I15.1	BLAST_tomato_bacs	match	30853	32068	1558	+	0	ID=C04HBa0230N10.1_rev_alignment_2;blast_gaps=8;Target=clone-C04HBa0230N10.1 108509 109733 -;blast_percent_identity=91.46;blast_mismatches=88;blast_evalue=0.0
C09SLe0009I15.1	BLAST_tomato_bacs	match	29592	30833	1610	+	0	ID=C04HBa0230N10.1_rev_alignment_3;blast_gaps=7;Target=clone-C04HBa0230N10.1 109755 110989 -;blast_percent_identity=91.80;blast_mismatches=91;blast_evalue=0.0
C09SLe0009I15.1	BLAST_tomato_bacs	match	4193	5204	1061	+	0	ID=C04HBa0246C09.1_fwd_alignment_1;blast_gaps=13;Target=clone-C04HBa0246C09.1 99164 100178 +;blast_percent_identity=89.07;blast_mismatches=89;blast_evalue=0.0
C09SLe0009I15.1	BLAST_tomato_bacs	match	48583	49708	1522	+	0	ID=C04SLf0138K20.1_fwd_alignment_1;blast_gaps=4;Target=clone-C04SLf0138K20.1 16703 17820 +;blast_percent_identity=92.20;blast_mismatches=76;blast_evalue=0.0
C09SLe0009I15.1	BLAST_tomato_bacs	match	45487	48591	4395	+	0	ID=C04SLf0138K20.1_fwd_alignment_2;blast_gaps=17;Target=clone-C04SLf0138K20.1 13309 16410 +;blast_percent_identity=93.39;blast_mismatches=179;blast_evalue=0.0
C09SLe0009I15.1	BLAST_tomato_bacs	match	27308	29584	2139	+	0	ID=C04SLm0121C14.1_rev_alignment_1;blast_gaps=12;Target=clone-C04SLm0121C14.1 96290 98575 -;blast_percent_identity=87.14;blast_mismatches=270;blast_evalue=0.0
C09SLe0009I15.1	BLAST_tomato_bacs	match	29584	31143	1489	+	0	ID=C04SLm0121C14.1_rev_alignment_2;blast_gaps=8;Target=clone-C04SLm0121C14.1 94740 96302 -;blast_percent_identity=87.64;blast_mismatches=179;blast_evalue=0.0
C09SLe0009I15.1	BLAST_tomato_bacs	match	27731	28968	636	+	0	ID=C05SLm0079C22.1_rev_alignment_1;blast_gaps=3;Target=clone-C05SLm0079C22.1 118646 119880 -;blast_percent_identity=81.68;blast_mismatches=222;blast_evalue=2e-179
C09SLe0009I15.1	BLAST_tomato_bacs	match	29584	32374	4397	+	0	ID=C06HBa0054K13.2_fwd_alignment_1;blast_gaps=6;Target=clone-C06HBa0054K13.2 89419 92221 +;blast_percent_identity=95.01;blast_mismatches=124;blast_evalue=0.0
C09SLe0009I15.1	BLAST_tomato_bacs	match	27308	29584	3723	+	0	ID=C06HBa0054K13.2_fwd_alignment_2;blast_gaps=4;Target=clone-C06HBa0054K13.2 87148 89431 +;blast_percent_identity=95.67;blast_mismatches=90;blast_evalue=0.0
C09SLe0009I15.1	BLAST_tomato_bacs	match	29584	32374	4397	+	0	ID=C06HBa0107A05.1_fwd_alignment_1;blast_gaps=6;Target=clone-C06HBa0107A05.1 3684 6486 +;blast_percent_identity=95.01;blast_mismatches=124;blast_evalue=0.0
C09SLe0009I15.1	BLAST_tomato_bacs	match	27308	29584	3745	+	0	ID=C06HBa0107A05.1_fwd_alignment_2;blast_gaps=2;Target=clone-C06HBa0107A05.1 1413 3696 +;blast_percent_identity=95.71;blast_mismatches=91;blast_evalue=0.0
C09SLe0009I15.1	BLAST_tomato_bacs	match	17021	18459	1917	+	0	ID=C06SLm0134B10.1_rev_alignment_1;blast_gaps=1;Target=clone-C06SLm0134B10.1 64859 66296 -;blast_percent_identity=91.87;blast_mismatches=116;blast_evalue=0.0
C09SLe0009I15.1	BLAST_tomato_bacs	match	38970	40397	1919	+	0	ID=C06SLm0134B10.1_rev_alignment_2;blast_gaps=1;Target=clone-C06SLm0134B10.1 64859 66285 -;blast_percent_identity=92.02;blast_mismatches=113;blast_evalue=0.0
C09SLe0009I15.1	BLAST_tomato_bacs	match	13462	14887	1984	+	0	ID=C06SLm0134B10.1_rev_alignment_3;blast_gaps=2;Target=clone-C06SLm0134B10.1 64859 66285 -;blast_percent_identity=92.65;blast_mismatches=102;blast_evalue=0.0
C09SLe0009I15.1	BLAST_tomato_bacs	match	4073	5146	1229	+	0	ID=C07HBa0002M15.1_rev_alignment_1;blast_gaps=7;Target=clone-C07HBa0002M15.1 39450 40533 -;blast_percent_identity=89.70;blast_mismatches=96;blast_evalue=0.0
C09SLe0009I15.1	BLAST_tomato_bacs	match	27314	28665	1110	+	0	ID=C07HBa0012A22.1_rev_alignment_1;blast_gaps=11;Target=clone-C07HBa0012A22.1 28059 29406 -;blast_percent_identity=86.07;blast_mismatches=175;blast_evalue=0.0
C09SLe0009I15.1	BLAST_tomato_bacs	match	12498	14186	1532	+	0	ID=C07HBa0012A22.1_fwd_alignment_1;blast_gaps=5;Target=clone-C07HBa0012A22.1 50399 52086 +;blast_percent_identity=86.65;blast_mismatches=217;blast_evalue=0.0
C09SLe0009I15.1	BLAST_tomato_bacs	match	38006	39696	1554	+	0	ID=C07HBa0012A22.1_fwd_alignment_2;blast_gaps=4;Target=clone-C07HBa0012A22.1 50399 52086 +;blast_percent_identity=86.77;blast_mismatches=217;blast_evalue=0.0
C09SLe0009I15.1	BLAST_tomato_bacs	match	16068	17758	1586	+	0	ID=C07HBa0012A22.1_fwd_alignment_3;blast_gaps=4;Target=clone-C07HBa0012A22.1 50399 52086 +;blast_percent_identity=87.01;blast_mismatches=213;blast_evalue=0.0
C09SLe0009I15.1	BLAST_tomato_bacs	match	27308	29584	3443	+	0	ID=C07HBa0025K09.1_rev_alignment_1;blast_gaps=4;Target=clone-C07HBa0025K09.1 89090 91371 -;blast_percent_identity=94.13;blast_mismatches=125;blast_evalue=0.0
C09SLe0009I15.1	BLAST_tomato_bacs	match	29584	31621	3142	+	0	ID=C07HBa0025K09.1_rev_alignment_2;blast_gaps=7;Target=clone-C07HBa0025K09.1 87054 89102 -;blast_percent_identity=94.74;blast_mismatches=91;blast_evalue=0.0
C09SLe0009I15.1	BLAST_tomato_bacs	match	27308	28462	1895	+	0	ID=C07HBa0025K09.1_rev_alignment_3;blast_gaps=2;Target=clone-C07HBa0025K09.1 83627 84781 -;blast_percent_identity=95.85;blast_mismatches=46;blast_evalue=0.0
C09SLe0009I15.1	BLAST_tomato_bacs	match	4073	5175	1285	+	0	ID=C07HBa0058M08.1_fwd_alignment_1;blast_gaps=5;Target=clone-C07HBa0058M08.1 33925 35046 +;blast_percent_identity=89.57;blast_mismatches=98;blast_evalue=0.0
C09SLe0009I15.1	BLAST_tomato_bacs	match	16068	17946	2718	+	0	ID=C07HBa0165I16.1_fwd_alignment_1;blast_gaps=4;Target=clone-C07HBa0165I16.1 103726 105605 +;blast_percent_identity=93.41;blast_mismatches=119;blast_evalue=0.0
C09SLe0009I15.1	BLAST_tomato_bacs	match	12498	14374	2744	+	0	ID=C07HBa0165I16.1_fwd_alignment_2;blast_gaps=5;Target=clone-C07HBa0165I16.1 103726 105605 +;blast_percent_identity=93.62;blast_mismatches=113;blast_evalue=0.0
C09SLe0009I15.1	BLAST_tomato_bacs	match	38006	39884	2765	+	0	ID=C07HBa0165I16.1_fwd_alignment_3;blast_gaps=4;Target=clone-C07HBa0165I16.1 103726 105605 +;blast_percent_identity=93.73;blast_mismatches=113;blast_evalue=0.0
C09SLe0009I15.1	BLAST_tomato_bacs	match	27308	29584	3745	+	0	ID=C07SLm0096B05.1_fwd_alignment_1;blast_gaps=2;Target=clone-C07SLm0096B05.1 15409 17692 +;blast_percent_identity=95.71;blast_mismatches=91;blast_evalue=0.0
C09SLe0009I15.1	BLAST_tomato_bacs	match	29584	30811	2095	+	0	ID=C07SLm0096B05.1_fwd_alignment_2;blast_gaps=3;Target=clone-C07SLm0096B05.1 17680 18906 +;blast_percent_identity=96.75;blast_mismatches=37;blast_evalue=0.0
C09SLe0009I15.1	BLAST_tomato_bacs	match	27308	29262	2958	+	0	ID=C08SLm0031I10.1_rev_alignment_1;blast_gaps=3;Target=clone-C08SLm0031I10.1 56414 58367 -;blast_percent_identity=94.22;blast_mismatches=110;blast_evalue=0.0
C09SLe0009I15.1	BLAST_tomato_bacs	match	29584	31375	2831	+	0	ID=C08SLm0031I10.1_rev_alignment_2;blast_gaps=2;Target=clone-C08SLm0031I10.1 43488 45279 -;blast_percent_identity=95.26;blast_mismatches=83;blast_evalue=0.0
C09SLe0009I15.1	BLAST_tomato_bacs	match	27690	29584	2644	+	0	ID=C08SLm0119I05.1_rev_alignment_1;blast_gaps=7;Target=clone-C08SLm0119I05.1 80936 82829 -;blast_percent_identity=92.80;blast_mismatches=122;blast_evalue=0.0
C09SLe0009I15.1	BLAST_tomato_bacs	match	30918	32353	2020	+	0	ID=C08SLm0119I05.1_rev_alignment_2;blast_gaps=6;Target=clone-C08SLm0119I05.1 78194 79639 -;blast_percent_identity=92.82;blast_mismatches=88;blast_evalue=0.0
C09SLe0009I15.1	BLAST_tomato_bacs	match	30286	32544	4437	+	0	ID=C09SLe0103M07.1_fwd_alignment_1;blast_gaps=0;Target=clone-C09SLe0103M07.1 1 2259 +;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=0.0
C09SLe0009I15.1	BLAST_tomato_bacs	match	93035	94090	2077	+	0	ID=C09SLe0103M07.1_fwd_alignment_2;blast_gaps=1;Target=clone-C09SLe0103M07.1 4278 5332 +;blast_percent_identity=99.91;blast_mismatches=0;blast_evalue=0.0
C09SLe0009I15.1	BLAST_tomato_bacs	match	27647	29548	3001	+	0	ID=C11HBa0029C01.2_fwd_alignment_1;blast_gaps=3;Target=clone-C11HBa0029C01.2 45993 47900 +;blast_percent_identity=94.92;blast_mismatches=89;blast_evalue=0.0
C09SLe0009I15.1	BLAST_tomato_bacs	match	29588	32368	4448	+	0	ID=C11HBa0029C01.2_fwd_alignment_2;blast_gaps=6;Target=clone-C11HBa0029C01.2 56603 59395 +;blast_percent_identity=95.35;blast_mismatches=114;blast_evalue=0.0
C09SLe0009I15.1	BLAST_tomato_bacs	match	27639	29584	3184	+	0	ID=C11HBa0107K14.2_rev_alignment_1;blast_gaps=2;Target=clone-C11HBa0107K14.2 87868 89820 -;blast_percent_identity=95.60;blast_mismatches=79;blast_evalue=0.0
C09SLe0009I15.1	BLAST_tomato_bacs	match	29584	32219	4329	+	0	ID=C11HBa0107K14.2_rev_alignment_2;blast_gaps=9;Target=clone-C11HBa0107K14.2 85234 87880 -;blast_percent_identity=96.00;blast_mismatches=87;blast_evalue=0.0
C09SLe0009I15.1	BLAST_tomato_bacs	match	27308	29584	3632	+	0	ID=C11HBa0249E07.1_fwd_alignment_1;blast_gaps=5;Target=clone-C11HBa0249E07.1 95150 97430 +;blast_percent_identity=95.19;blast_mismatches=98;blast_evalue=0.0
C09SLe0009I15.1	BLAST_tomato_bacs	match	29584	30811	2024	+	0	ID=C11HBa0249E07.1_fwd_alignment_2;blast_gaps=3;Target=clone-C11HBa0249E07.1 97418 98644 +;blast_percent_identity=96.01;blast_mismatches=46;blast_evalue=0.0
C09SLe0009I15.1	BLAST_tomato_bacs	match	29584	32218	4232	+	0	ID=C12HBa0020C08.1_fwd_alignment_1;blast_gaps=9;Target=clone-C12HBa0020C08.1 20400 23045 +;blast_percent_identity=95.55;blast_mismatches=99;blast_evalue=0.0
C09SLe0009I15.1	BLAST_tomato_bacs	match	27640	29584	3174	+	0	ID=C12HBa0020C08.1_fwd_alignment_2;blast_gaps=3;Target=clone-C12HBa0020C08.1 18462 20412 +;blast_percent_identity=95.59;blast_mismatches=78;blast_evalue=0.0
C09SLe0009I15.1	BLAST_tomato_bacs	match	16068	18448	3663	+	0	ID=C12HBa0049J09.1_fwd_alignment_1;blast_gaps=2;Target=clone-C12HBa0049J09.1 61976 64357 +;blast_percent_identity=94.46;blast_mismatches=129;blast_evalue=0.0
C09SLe0009I15.1	BLAST_tomato_bacs	match	12498	14876	3697	+	0	ID=C12HBa0049J09.1_fwd_alignment_2;blast_gaps=3;Target=clone-C12HBa0049J09.1 61976 64357 +;blast_percent_identity=94.67;blast_mismatches=122;blast_evalue=0.0
C09SLe0009I15.1	BLAST_tomato_bacs	match	38006	40379	3721	+	0	ID=C12HBa0049J09.1_fwd_alignment_3;blast_gaps=2;Target=clone-C12HBa0049J09.1 61976 64350 +;blast_percent_identity=94.82;blast_mismatches=120;blast_evalue=0.0
C09SLe0009I15.1	BLAST_tomato_bacs	match	27308	29584	3768	+	0	ID=C12HBa0115G22.1_rev_alignment_1;blast_gaps=2;Target=clone-C12HBa0115G22.1 133314 135597 -;blast_percent_identity=95.84;blast_mismatches=88;blast_evalue=0.0
C09SLe0009I15.1	BLAST_tomato_bacs	match	29584	30811	2095	+	0	ID=C12HBa0115G22.1_rev_alignment_2;blast_gaps=2;Target=clone-C12HBa0115G22.1 132099 133326 -;blast_percent_identity=96.66;blast_mismatches=39;blast_evalue=0.0
C09SLe0009I15.1	BLAST_tomato_bacs	match	4073	5204	1237	+	0	ID=C12HBa0206G16.1_fwd_alignment_1;blast_gaps=10;Target=clone-C12HBa0206G16.1 133100 134241 +;blast_percent_identity=89.20;blast_mismatches=102;blast_evalue=0.0
C09SLe0009I15.1	Contigs	contig	1	7436	.	.	0	ID=contig1_1;length=7436
C09SLe0009I15.1	Contigs	contig	7537	21036	.	.	0	ID=contig2_1;length=13500
C09SLe0009I15.1	Contigs	contig	21137	34098	.	.	0	ID=contig3_1;length=12962
C09SLe0009I15.1	Contigs	contig	34100	34165	.	.	0	ID=contig4_1;length=66
C09SLe0009I15.1	Contigs	contig	34266	54471	.	.	0	ID=contig5_1;length=20206
C09SLe0009I15.1	Contigs	contig	54572	70802	.	.	0	ID=contig6_1;length=16231
C09SLe0009I15.1	Contigs	contig	70903	81489	.	.	0	ID=contig7_1;length=10587
C09SLe0009I15.1	Contigs	contig	81491	81562	.	.	0	ID=contig8_1;length=72
C09SLe0009I15.1	Contigs	contig	81564	81564	.	.	0	ID=contig9_1;length=1
C09SLe0009I15.1	Contigs	contig	81567	81573	.	.	0	ID=contig10_1;length=7
C09SLe0009I15.1	Contigs	contig	81576	81606	.	.	0	ID=contig11_1;length=31
C09SLe0009I15.1	Contigs	contig	81707	86260	.	.	0	ID=contig12_1;length=4554
C09SLe0009I15.1	Contigs	contig	86361	86755	.	.	0	ID=contig13_1;length=395
C09SLe0009I15.1	Contigs	contig	86782	89921	.	.	0	ID=contig14_1;length=3140
C09SLe0009I15.1	Contigs	contig	90022	92889	.	.	0	ID=contig15_1;length=2868
C09SLe0009I15.1	Contigs	contig	92990	94090	.	.	0	ID=contig16_1;length=1101
C09SLe0009I15.1	BLAST_tomato_bac_ends	match	659	1075	819	+	0	ID=C09SLe0009I15.1-SL_MboI0080E11_T7_171850_1;blast_gaps=0;Target=SL_MboI0080E11_T7_171850 1 417 -;is_problematic=0;blast_percent_identity=99.76;blast_mismatches=1;blast_evalue=0.0
C09SLe0009I15.1	BLAST_tomato_bac_ends	match	907	1578	1172	+	0	ID=C09SLe0009I15.1-SL_FOS0051I10_pIBR_450580_1;blast_gaps=0;Target=SL_FOS0051I10_pIBR_450580 3 674 +;is_problematic=1;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=0.0
C09SLe0009I15.1	BLAST_tomato_bac_ends	match	1308	1924	1092	+	0	ID=C09SLe0009I15.1-SL_EcoRI0004O16_SP6_289101_1;blast_gaps=1;Target=SL_EcoRI0004O16_SP6_289101 1 616 -;is_problematic=0;blast_percent_identity=99.68;blast_mismatches=1;blast_evalue=0.0
C09SLe0009I15.1	BLAST_tomato_bac_ends	match	8540	9212	1207	+	0	ID=C09SLe0009I15.1-LE_HBa0246K05_SP6_405859_1;blast_gaps=0;Target=LE_HBa0246K05_SP6_405859 1 673 -;is_problematic=0;blast_percent_identity=98.96;blast_mismatches=7;blast_evalue=0.0
C09SLe0009I15.1	BLAST_tomato_bac_ends	match	8607	9207	1098	+	0	ID=C09SLe0009I15.1-LE_HBa0057B17_SP6_45008_1;blast_gaps=1;Target=LE_HBa0057B17_SP6_45008 1 602 -;is_problematic=0;blast_percent_identity=99.67;blast_mismatches=1;blast_evalue=0.0
C09SLe0009I15.1	BLAST_tomato_bac_ends	match	9240	10003	1499	+	0	ID=C09SLe0009I15.1-LE_HBa0156B06_T7_101819_1;blast_gaps=0;Target=LE_HBa0156B06_T7_101819 1 764 +;is_problematic=0;blast_percent_identity=99.74;blast_mismatches=2;blast_evalue=0.0
C09SLe0009I15.1	BLAST_tomato_bac_ends	match	12891	13489	1140	+	0	ID=C09SLe0009I15.1-LE_HBa0126H14_SP6_97514_1;blast_gaps=0;Target=LE_HBa0126H14_SP6_97514 1 599 -;is_problematic=0;blast_percent_identity=99.00;blast_mismatches=6;blast_evalue=0.0
C09SLe0009I15.1	BLAST_tomato_bac_ends	match	13656	14307	1292	+	0	ID=C09SLe0009I15.1-LE_HBa0185M06_SP6_266211_1;blast_gaps=0;Target=LE_HBa0185M06_SP6_266211 2 653 -;is_problematic=0;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=0.0
C09SLe0009I15.1	BLAST_tomato_bac_ends	match	14163	14737	1140	+	0	ID=C09SLe0009I15.1-LE_HBa0213E22_T7_374239_1;blast_gaps=0;Target=LE_HBa0213E22_T7_374239 18 592 -;is_problematic=0;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=0.0
C09SLe0009I15.1	BLAST_tomato_bac_ends	match	16106	16834	1445	+	0	ID=C09SLe0009I15.1-SL_FOS0200J01_pIBR_553897_1;blast_gaps=0;Target=SL_FOS0200J01_pIBR_553897 3 731 +;is_problematic=1;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=0.0
C09SLe0009I15.1	BLAST_tomato_bac_ends	clone	16396	51191	1218.5	.	0	is_problematic=1;ID=C09SLe0009I15.1-SL_FOS0214N01_1
C09SLe0009I15.1	BLAST_tomato_bac_ends	clone_end	16396	17046	1277	+	0	ID=C09SLe0009I15.1-SL_FOS0214N01_pIBR_564841_1;blast_gaps=1;Target=SL_FOS0214N01_pIBR_564841 2 653 +;Parent=C09SLe0009I15.1-SL_FOS0214N01_1;is_problematic=1;blast_percent_identity=99.85;blast_mismatches=0;blast_evalue=0.0
C09SLe0009I15.1	BLAST_tomato_bac_ends	clone_start	50607	51191	1160	+	0	ID=C09SLe0009I15.1-SL_FOS0214N01_pIBF_564840_1;blast_gaps=0;Target=SL_FOS0214N01_pIBF_564840 1 585 -;Parent=C09SLe0009I15.1-SL_FOS0214N01_1;is_problematic=1;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=0.0
C09SLe0009I15.1	BLAST_tomato_bac_ends	match	17126	17968	1655	+	0	ID=C09SLe0009I15.1-LE_HBa0217G05_SP6_393065_1;blast_gaps=0;Target=LE_HBa0217G05_SP6_393065 1 843 +;is_problematic=0;blast_percent_identity=99.76;blast_mismatches=2;blast_evalue=0.0
C09SLe0009I15.1	BLAST_tomato_bac_ends	clone	18807	62776	1057.5	+	0	is_problematic=0;ID=C09SLe0009I15.1-SL_FOS0037C01_1
C09SLe0009I15.1	BLAST_tomato_bac_ends	clone_start	18807	19443	1263	+	0	ID=C09SLe0009I15.1-SL_FOS0037C01_pIBF_426148_1;blast_gaps=0;Target=SL_FOS0037C01_pIBF_426148 2 638 -;Parent=C09SLe0009I15.1-SL_FOS0037C01_1;is_problematic=0;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=0.0
C09SLe0009I15.1	BLAST_tomato_bac_ends	clone_end	62347	62776	852	+	0	ID=C09SLe0009I15.1-SL_FOS0037C01_pIBR_426149_1;blast_gaps=0;Target=SL_FOS0037C01_pIBR_426149 3 432 +;Parent=C09SLe0009I15.1-SL_FOS0037C01_1;is_problematic=0;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=0.0
C09SLe0009I15.1	BLAST_tomato_bac_ends	match	26434	27074	1183	+	0	ID=C09SLe0009I15.1-SL_MboI0006M17_T7_146312_1;blast_gaps=1;Target=SL_MboI0006M17_T7_146312 1 640 -;is_problematic=0;blast_percent_identity=99.84;blast_mismatches=0;blast_evalue=0.0
C09SLe0009I15.1	BLAST_tomato_bac_ends	match	27851	28467	1138	+	0	ID=C09SLe0009I15.1-LE_HBa0135O23_T7_61773_1;blast_gaps=1;Target=LE_HBa0135O23_T7_61773 1 618 -;is_problematic=0;blast_percent_identity=98.38;blast_mismatches=9;blast_evalue=0.0
C09SLe0009I15.1	BLAST_tomato_bac_ends	match	30280	30913	1199	+	0	ID=C09SLe0009I15.1-SL_EcoRI0103M07_SP6_314304_1;blast_gaps=0;Target=SL_EcoRI0103M07_SP6_314304 20 653 +;is_problematic=0;blast_percent_identity=99.68;blast_mismatches=2;blast_evalue=0.0
C09SLe0009I15.1	BLAST_tomato_bac_ends	match	34266	34721	763	+	0	ID=C09SLe0009I15.1-LE_HBa0057B17_SP6_45008_2;blast_gaps=1;Target=LE_HBa0057B17_SP6_45008 2 458 -;is_problematic=0;blast_percent_identity=98.25;blast_mismatches=7;blast_evalue=0.0
C09SLe0009I15.1	BLAST_tomato_bac_ends	match	35158	35728	1047	+	0	ID=C09SLe0009I15.1-LE_HBa0177K17_SP6_264357_1;blast_gaps=1;Target=LE_HBa0177K17_SP6_264357 1 572 +;is_problematic=0;blast_percent_identity=98.25;blast_mismatches=9;blast_evalue=0.0
C09SLe0009I15.1	BLAST_tomato_bac_ends	match	39157	39807	1291	+	0	ID=C09SLe0009I15.1-LE_HBa0236C24_SP6_395067_1;blast_gaps=0;Target=LE_HBa0236C24_SP6_395067 1 651 -;is_problematic=0;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=0.0
C09SLe0009I15.1	BLAST_tomato_bac_ends	match	39843	40616	1364	+	0	ID=C09SLe0009I15.1-LE_HBa0086A17_T7_23457_1;blast_gaps=0;Target=LE_HBa0086A17_T7_23457 7 780 +;is_problematic=0;blast_percent_identity=98.84;blast_mismatches=9;blast_evalue=0.0
C09SLe0009I15.1	BLAST_tomato_bac_ends	match	43249	43915	1281	+	0	ID=C09SLe0009I15.1-SL_FOS0183B19_pIBF_540492_1;blast_gaps=0;Target=SL_FOS0183B19_pIBF_540492 2 668 +;is_problematic=1;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=0.0
C09SLe0009I15.1	BLAST_tomato_bac_ends	match	44035	44641	1203	+	0	ID=C09SLe0009I15.1-SL_FOS0272O06_pIBR_609443_1;blast_gaps=0;Target=SL_FOS0272O06_pIBR_609443 3 609 +;is_problematic=1;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=0.0
C09SLe0009I15.1	BLAST_tomato_bac_ends	match	45400	46013	1176	+	0	ID=C09SLe0009I15.1-SL_MboI0116A01_T7_206582_1;blast_gaps=0;Target=SL_MboI0116A01_T7_206582 8 621 -;is_problematic=0;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=0.0
C09SLe0009I15.1	BLAST_tomato_bac_ends	match	49292	50012	1429	+	0	ID=C09SLe0009I15.1-SL_EcoRI0045J14_SP6_245651_1;blast_gaps=0;Target=SL_EcoRI0045J14_SP6_245651 21 741 -;is_problematic=0;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=0.0
C09SLe0009I15.1	BLAST_tomato_bac_ends	match	54617	55228	1112	+	0	ID=C09SLe0009I15.1-SL_MboI0140P15_T7_362465_1;blast_gaps=0;Target=SL_MboI0140P15_T7_362465 88 699 -;is_problematic=0;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=0.0
C09SLe0009I15.1	BLAST_tomato_bac_ends	match	54710	55228	928	+	0	ID=C09SLe0009I15.1-SL_MboI0144H04_SP6_365130_1;blast_gaps=0;Target=SL_MboI0144H04_SP6_365130 144 662 -;is_problematic=0;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=0.0
C09SLe0009I15.1	BLAST_tomato_bac_ends	match	55295	56027	1390	+	0	ID=C09SLe0009I15.1-LE_HBa0099P08_SP6_31838_1;blast_gaps=1;Target=LE_HBa0099P08_SP6_31838 1 732 -;is_problematic=0;blast_percent_identity=99.05;blast_mismatches=6;blast_evalue=0.0
C09SLe0009I15.1	BLAST_tomato_bac_ends	match	56174	56672	965	+	0	ID=C09SLe0009I15.1-LE_HBa0229A22_SP6_388580_1;blast_gaps=0;Target=LE_HBa0229A22_SP6_388580 1 499 +;is_problematic=0;blast_percent_identity=99.40;blast_mismatches=3;blast_evalue=0.0
C09SLe0009I15.1	BLAST_tomato_bac_ends	match	56846	57369	952	+	0	ID=C09SLe0009I15.1-SL_MboI0037O22_SP6_281887_1;blast_gaps=1;Target=SL_MboI0037O22_SP6_281887 1 523 -;is_problematic=0;blast_percent_identity=99.81;blast_mismatches=0;blast_evalue=0.0
C09SLe0009I15.1	BLAST_tomato_bac_ends	match	69545	70115	1132	+	0	ID=C09SLe0009I15.1-SL_FOS0044J12_pIBR_419131_1;blast_gaps=0;Target=SL_FOS0044J12_pIBR_419131 1 571 -;is_problematic=1;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=0.0
C09SLe0009I15.1	BLAST_tomato_bac_ends	match	71345	71945	1136	+	0	ID=C09SLe0009I15.1-LE_HBa0057B17_T7_45009_1;blast_gaps=0;Target=LE_HBa0057B17_T7_45009 171 771 -;is_problematic=0;blast_percent_identity=99.83;blast_mismatches=1;blast_evalue=0.0
C09SLe0009I15.1	BLAST_tomato_bac_ends	match	77477	78151	1338	+	0	ID=C09SLe0009I15.1-SL_FOS0130G18_pIBF_490292_1;blast_gaps=0;Target=SL_FOS0130G18_pIBF_490292 2 676 +;is_problematic=0;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=0.0
C09SLe0009I15.1	BLAST_tomato_bac_ends	match	81716	82161	884	+	0	ID=C09SLe0009I15.1-SL_FOS0198G11_pIBF_552236_1;blast_gaps=0;Target=SL_FOS0198G11_pIBF_552236 2 447 -;is_problematic=1;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=0.0
C09SLe0009I15.1	BLAST_tomato_bac_ends	match	83659	84159	952	+	0	ID=C09SLe0009I15.1-SL_FOS0044J12_pIBF_419130_1;blast_gaps=0;Target=SL_FOS0044J12_pIBF_419130 2 502 -;is_problematic=1;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=0.0
C09SLe0009I15.1	BLAST_tomato_bac_ends	match	84953	85077	248	+	0	ID=C09SLe0009I15.1-SL_MboI0075L22_T7_184257_1;blast_gaps=0;Target=SL_MboI0075L22_T7_184257 585 709 +;is_problematic=0;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=4e-62
C09SLe0009I15.1	BLAST_tomato_bac_ends	match	93492	94054	1108	+	0	ID=C09SLe0009I15.1-SL_EcoRI0009I15_T7_227007_1;blast_gaps=0;Target=SL_EcoRI0009I15_T7_227007 1 563 -;is_problematic=0;blast_percent_identity=99.82;blast_mismatches=1;blast_evalue=0.0
C09SLe0009I15.1	GenomeThreader_SGN_E_tomato	match	14428	14836	0.924	-	0	ID=SGN-E241790_alignment_2;Target=SGN-E241790 1 409 +
C09SLe0009I15.1	GenomeThreader_SGN_E_tomato	match_part	14428	14836	0.924	-	0	ID=GTH_SGN_E_tom_match_part_1;Target=SGN-E241790 1 409 +;Parent=SGN-E241790_alignment_2
C09SLe0009I15.1	GenomeThreader_SGN_E_tomato	match	16738	17520	0.926	-	0	ID=SGN-E351082_alignment_2;Target=SGN-E351082 1 778 +
C09SLe0009I15.1	GenomeThreader_SGN_E_tomato	match_part	16738	17520	0.926	-	0	ID=GTH_SGN_E_tom_match_part_2;Target=SGN-E351082 1 778 +;Parent=SGN-E351082_alignment_2
C09SLe0009I15.1	GenomeThreader_SGN_E_tomato	match	27354	28116	0.965	-	0	ID=SGN-E211563_alignment_2;Target=SGN-E211563 1 765 +
C09SLe0009I15.1	GenomeThreader_SGN_E_tomato	match_part	27354	28116	0.965	-	0	ID=GTH_SGN_E_tom_match_part_3;Target=SGN-E211563 1 765 +;Parent=SGN-E211563_alignment_2
C09SLe0009I15.1	GenomeThreader_SGN_E_tomato	match	27388	27786	0.970	-	0	ID=SGN-E200850_alignment_2;Target=SGN-E200850 1 399 +
C09SLe0009I15.1	GenomeThreader_SGN_E_tomato	match_part	27388	27786	0.970	-	0	ID=GTH_SGN_E_tom_match_part_4;Target=SGN-E200850 1 399 +;Parent=SGN-E200850_alignment_2
C09SLe0009I15.1	GenomeThreader_SGN_E_tomato	match	27520	28089	0.954	-	0	ID=SGN-E201786_alignment_2;Target=SGN-E201786 1 571 +
C09SLe0009I15.1	GenomeThreader_SGN_E_tomato	match_part	27520	28089	0.954	-	0	ID=GTH_SGN_E_tom_match_part_5;Target=SGN-E201786 1 571 +;Parent=SGN-E201786_alignment_2
C09SLe0009I15.1	GenomeThreader_SGN_E_tomato	match	27705	28331	0.960	-	0	ID=SGN-E209835_alignment_2;Target=SGN-E209835 1 628 +
C09SLe0009I15.1	GenomeThreader_SGN_E_tomato	match_part	27705	28331	0.960	-	0	ID=GTH_SGN_E_tom_match_part_6;Target=SGN-E209835 1 628 +;Parent=SGN-E209835_alignment_2
C09SLe0009I15.1	GenomeThreader_SGN_E_tomato	match	27730	28281	0.944	-	0	ID=SGN-E299938_alignment_2;Target=SGN-E299938 1 554 +
C09SLe0009I15.1	GenomeThreader_SGN_E_tomato	match_part	27730	28281	0.944	-	0	ID=GTH_SGN_E_tom_match_part_7;Target=SGN-E299938 1 554 +;Parent=SGN-E299938_alignment_2
C09SLe0009I15.1	GenomeThreader_SGN_E_tomato	match	27735	28371	0.959	-	0	ID=SGN-E205887_alignment_2;Target=SGN-E205887 1 638 +
C09SLe0009I15.1	GenomeThreader_SGN_E_tomato	match_part	27735	28371	0.959	-	0	ID=GTH_SGN_E_tom_match_part_8;Target=SGN-E205887 1 638 +;Parent=SGN-E205887_alignment_2
C09SLe0009I15.1	GenomeThreader_SGN_E_tomato	match	27757	28331	0.960	-	0	ID=SGN-E209830_alignment_2;Target=SGN-E209830 1 576 +
C09SLe0009I15.1	GenomeThreader_SGN_E_tomato	match_part	27757	28331	0.960	-	0	ID=GTH_SGN_E_tom_match_part_9;Target=SGN-E209830 1 576 +;Parent=SGN-E209830_alignment_2
C09SLe0009I15.1	GenomeThreader_SGN_E_tomato	match	28237	28947	0.958	-	0	ID=SGN-E331947_alignment_2;Target=SGN-E331947 1 711 +
C09SLe0009I15.1	GenomeThreader_SGN_E_tomato	match_part	28237	28947	0.958	-	0	ID=GTH_SGN_E_tom_match_part_10;Target=SGN-E331947 1 711 +;Parent=SGN-E331947_alignment_2
C09SLe0009I15.1	GenomeThreader_SGN_E_tomato	match	30332	30700	0.921	-	0	ID=SGN-E332350_alignment_2;Target=SGN-E332350 1 367 +
C09SLe0009I15.1	GenomeThreader_SGN_E_tomato	match_part	30332	30700	0.921	-	0	ID=GTH_SGN_E_tom_match_part_11;Target=SGN-E332350 1 367 +;Parent=SGN-E332350_alignment_2
C09SLe0009I15.1	GenomeThreader_SGN_E_tomato	match	44996	45235	0.929	-	0	ID=SGN-E298763_alignment_2;Target=SGN-E298763 1 240 +
C09SLe0009I15.1	GenomeThreader_SGN_E_tomato	match_part	44996	45235	0.929	-	0	ID=GTH_SGN_E_tom_match_part_12;Target=SGN-E298763 1 240 +;Parent=SGN-E298763_alignment_2
C09SLe0009I15.1	GenomeThreader_SGN_E_tomato	match	44997	45236	0.929	-	0	ID=SGN-E372869_alignment_2;Target=SGN-E372869 1 240 +
C09SLe0009I15.1	GenomeThreader_SGN_E_tomato	match_part	44997	45236	0.929	-	0	ID=GTH_SGN_E_tom_match_part_13;Target=SGN-E372869 1 240 +;Parent=SGN-E372869_alignment_2
C09SLe0009I15.1	GenomeThreader_SGN_E_tomato	match	44997	45235	0.929	-	0	ID=SGN-E372870_alignment_2;Target=SGN-E372870 1 239 +
C09SLe0009I15.1	GenomeThreader_SGN_E_tomato	match_part	44997	45235	0.929	-	0	ID=GTH_SGN_E_tom_match_part_14;Target=SGN-E372870 1 239 +;Parent=SGN-E372870_alignment_2
C09SLe0009I15.1	GenomeThreader_SGN_E_tomato	match	44997	45235	0.929	-	0	ID=SGN-E378778_alignment_2;Target=SGN-E378778 1 239 +
C09SLe0009I15.1	GenomeThreader_SGN_E_tomato	match_part	44997	45235	0.929	-	0	ID=GTH_SGN_E_tom_match_part_15;Target=SGN-E378778 1 239 +;Parent=SGN-E378778_alignment_2
C09SLe0009I15.1	GenomeThreader_SGN_E_tomato	gene	14428	14836	.	-	0	ID=GTH_SGN_E_tom_gene_1
C09SLe0009I15.1	GenomeThreader_SGN_E_tomato	mRNA	14428	14836	.	-	0	ID=GTH_SGN_E_tom_gene_1_AGS_1;Parent=GTH_SGN_E_tom_gene_1
C09SLe0009I15.1	GenomeThreader_SGN_E_tomato	exon	14428	14836	0.924	-	0	ID=GTH_SGN_E_tom_exon_1;Parent=GTH_SGN_E_tom_gene_1_AGS_1
C09SLe0009I15.1	GenomeThreader_SGN_E_tomato	gene	16738	17520	.	-	0	ID=GTH_SGN_E_tom_gene_2
C09SLe0009I15.1	GenomeThreader_SGN_E_tomato	mRNA	16738	17520	.	-	0	ID=GTH_SGN_E_tom_gene_2_AGS_1;Parent=GTH_SGN_E_tom_gene_2
C09SLe0009I15.1	GenomeThreader_SGN_E_tomato	exon	16738	17520	0.926	-	0	ID=GTH_SGN_E_tom_exon_2;Parent=GTH_SGN_E_tom_gene_2_AGS_1
C09SLe0009I15.1	GenomeThreader_SGN_E_tomato	gene	27354	28947	.	-	0	ID=GTH_SGN_E_tom_gene_3
C09SLe0009I15.1	GenomeThreader_SGN_E_tomato	mRNA	27354	28947	.	-	0	ID=GTH_SGN_E_tom_gene_3_AGS_1;Parent=GTH_SGN_E_tom_gene_3
C09SLe0009I15.1	GenomeThreader_SGN_E_tomato	exon	27354	28947	0.965	-	0	ID=GTH_SGN_E_tom_exon_3;Parent=GTH_SGN_E_tom_gene_3_AGS_1
C09SLe0009I15.1	GenomeThreader_SGN_E_tomato	gene	30332	30700	.	-	0	ID=GTH_SGN_E_tom_gene_4
C09SLe0009I15.1	GenomeThreader_SGN_E_tomato	mRNA	30332	30700	.	-	0	ID=GTH_SGN_E_tom_gene_4_AGS_1;Parent=GTH_SGN_E_tom_gene_4
C09SLe0009I15.1	GenomeThreader_SGN_E_tomato	exon	30332	30700	0.921	-	0	ID=GTH_SGN_E_tom_exon_4;Parent=GTH_SGN_E_tom_gene_4_AGS_1
C09SLe0009I15.1	GenomeThreader_SGN_E_tomato	gene	44996	45236	.	-	0	ID=GTH_SGN_E_tom_gene_5
C09SLe0009I15.1	GenomeThreader_SGN_E_tomato	mRNA	44996	45236	.	-	0	ID=GTH_SGN_E_tom_gene_5_AGS_1;Parent=GTH_SGN_E_tom_gene_5
C09SLe0009I15.1	GenomeThreader_SGN_E_tomato	exon	44996	45236	0.929	-	0	ID=GTH_SGN_E_tom_exon_5;Parent=GTH_SGN_E_tom_gene_5_AGS_1
C09SLe0009I15.1	AUGUSTUS_tom_cdna	gene	21825	23063	1	-	.	ID=g1_1
C09SLe0009I15.1	AUGUSTUS_tom_cdna	transcript	21825	23063	.	-	.	ID=g1.t1_1;Parent=g1_1
C09SLe0009I15.1	AUGUSTUS_tom_cdna	stop_codon	21825	21827	.	-	0	Parent=g1.t1_1
C09SLe0009I15.1	AUGUSTUS_tom_cdna	CDS	21825	23063	.	-	0	ID=g1.t1.cds_1;Parent=g1.t1_1
C09SLe0009I15.1	AUGUSTUS_tom_cdna	start_codon	23061	23063	.	-	0	Parent=g1.t1_1
C09SLe0009I15.1	AUGUSTUS_tom_cdna	gene	65121	70698	1	+	.	ID=g2_1
C09SLe0009I15.1	AUGUSTUS_tom_cdna	transcript	65121	70698	.	+	.	ID=g2.t1_1;Parent=g2_1
C09SLe0009I15.1	AUGUSTUS_tom_cdna	start_codon	65121	65123	.	+	0	Parent=g2.t1_1
C09SLe0009I15.1	AUGUSTUS_tom_cdna	CDS	65121	65479	.	+	0	ID=g2.t1.cds_1;Parent=g2.t1_1
C09SLe0009I15.1	AUGUSTUS_tom_cdna	CDS	70647	70698	.	+	1	ID=g2.t1.cds_2;Parent=g2.t1_1
C09SLe0009I15.1	AUGUSTUS_tom_cdna	stop_codon	70696	70698	.	+	0	Parent=g2.t1_1
C09SLe0009I15.1	AUGUSTUS_tom_cdna	gene	73806	75068	1	-	.	ID=g3_1
C09SLe0009I15.1	AUGUSTUS_tom_cdna	transcript	73806	75068	.	-	.	ID=g3.t1_1;Parent=g3_1
C09SLe0009I15.1	AUGUSTUS_tom_cdna	stop_codon	73806	73808	.	-	0	Parent=g3.t1_1
C09SLe0009I15.1	AUGUSTUS_tom_cdna	CDS	73806	75068	.	-	0	ID=g3.t1.cds_1;Parent=g3.t1_1
C09SLe0009I15.1	AUGUSTUS_tom_cdna	start_codon	75066	75068	.	-	0	Parent=g3.t1_1
C09SLe0009I15.1	AUGUSTUS_ab_initio	gene	21825	23063	1	-	.	ID=g1_2
C09SLe0009I15.1	AUGUSTUS_ab_initio	transcript	21825	23063	.	-	.	ID=g1.t1_2;Parent=g1_2
C09SLe0009I15.1	AUGUSTUS_ab_initio	stop_codon	21825	21827	.	-	0	Parent=g1.t1_2
C09SLe0009I15.1	AUGUSTUS_ab_initio	CDS	21825	23063	.	-	0	ID=g1.t1.cds_2;Parent=g1.t1_2
C09SLe0009I15.1	AUGUSTUS_ab_initio	start_codon	23061	23063	.	-	0	Parent=g1.t1_2
C09SLe0009I15.1	AUGUSTUS_ab_initio	gene	65121	65615	1	+	.	ID=g2_2
C09SLe0009I15.1	AUGUSTUS_ab_initio	transcript	65121	65615	.	+	.	ID=g2.t1_2;Parent=g2_2
C09SLe0009I15.1	AUGUSTUS_ab_initio	start_codon	65121	65123	.	+	0	Parent=g2.t1_2
C09SLe0009I15.1	AUGUSTUS_ab_initio	CDS	65121	65615	.	+	0	ID=g2.t1.cds_3;Parent=g2.t1_2
C09SLe0009I15.1	AUGUSTUS_ab_initio	stop_codon	65613	65615	.	+	0	Parent=g2.t1_2
C09SLe0009I15.1	AUGUSTUS_ab_initio	gene	73806	75068	1	-	.	ID=g3_2
C09SLe0009I15.1	AUGUSTUS_ab_initio	transcript	73806	75068	.	-	.	ID=g3.t1_2;Parent=g3_2
C09SLe0009I15.1	AUGUSTUS_ab_initio	stop_codon	73806	73808	.	-	0	Parent=g3.t1_2
C09SLe0009I15.1	AUGUSTUS_ab_initio	CDS	73806	75068	.	-	0	ID=g3.t1.cds_2;Parent=g3.t1_2
C09SLe0009I15.1	AUGUSTUS_ab_initio	start_codon	75066	75068	.	-	0	Parent=g3.t1_2
C09SLe0009I15.1	AUGUSTUS_tom_ugs	gene	21825	23063	1	-	.	ID=g1_3
C09SLe0009I15.1	AUGUSTUS_tom_ugs	transcript	21825	23063	.	-	.	ID=g1.t1_3;Parent=g1_3
C09SLe0009I15.1	AUGUSTUS_tom_ugs	stop_codon	21825	21827	.	-	0	Parent=g1.t1_3
C09SLe0009I15.1	AUGUSTUS_tom_ugs	CDS	21825	23063	.	-	0	ID=g1.t1.cds_3;Parent=g1.t1_3
C09SLe0009I15.1	AUGUSTUS_tom_ugs	start_codon	23061	23063	.	-	0	Parent=g1.t1_3
C09SLe0009I15.1	AUGUSTUS_tom_ugs	gene	65121	70698	1	+	.	ID=g2_3
C09SLe0009I15.1	AUGUSTUS_tom_ugs	transcript	65121	70698	.	+	.	ID=g2.t1_3;Parent=g2_3
C09SLe0009I15.1	AUGUSTUS_tom_ugs	start_codon	65121	65123	.	+	0	Parent=g2.t1_3
C09SLe0009I15.1	AUGUSTUS_tom_ugs	CDS	65121	65479	.	+	0	ID=g2.t1.cds_4;Parent=g2.t1_3
C09SLe0009I15.1	AUGUSTUS_tom_ugs	CDS	70647	70698	.	+	1	ID=g2.t1.cds_5;Parent=g2.t1_3
C09SLe0009I15.1	AUGUSTUS_tom_ugs	stop_codon	70696	70698	.	+	0	Parent=g2.t1_3
C09SLe0009I15.1	AUGUSTUS_tom_ugs	gene	73806	75068	1	-	.	ID=g3_3
C09SLe0009I15.1	AUGUSTUS_tom_ugs	transcript	73806	75068	.	-	.	ID=g3.t1_3;Parent=g3_3
C09SLe0009I15.1	AUGUSTUS_tom_ugs	stop_codon	73806	73808	.	-	0	Parent=g3.t1_3
C09SLe0009I15.1	AUGUSTUS_tom_ugs	CDS	73806	75068	.	-	0	ID=g3.t1.cds_3;Parent=g3.t1_3
C09SLe0009I15.1	AUGUSTUS_tom_ugs	start_codon	75066	75068	.	-	0	Parent=g3.t1_3
C09SLe0009I15.1	GenomeThreader_SGN_U_tomato	match	14428	14836	0.924	+	0	ID=SGN-U341680_alignment_1;Target=SGN-U341680 1 409 +
C09SLe0009I15.1	GenomeThreader_SGN_U_tomato	match_part	14428	14836	0.924	+	0	ID=GTH_SGN_U_tom_match_part_1;Target=SGN-U341680 1 409 +;Parent=SGN-U341680_alignment_1
C09SLe0009I15.1	GenomeThreader_SGN_U_tomato	match	16738	17520	0.926	-	0	ID=SGN-U345321_alignment_1;Target=SGN-U345321 1 778 +
C09SLe0009I15.1	GenomeThreader_SGN_U_tomato	match_part	16738	17520	0.926	-	0	ID=GTH_SGN_U_tom_match_part_2;Target=SGN-U345321 1 778 +;Parent=SGN-U345321_alignment_1
C09SLe0009I15.1	GenomeThreader_SGN_U_tomato	match	23980	28947	0.931	+	0	ID=SGN-U318979_alignment_1;Target=SGN-U318979 71 1990 -
C09SLe0009I15.1	GenomeThreader_SGN_U_tomato	match_part	23980	24016	0.676	+	0	ID=GTH_SGN_U_tom_match_part_3;Target=SGN-U318979 71 106 -;Parent=SGN-U318979_alignment_1
C09SLe0009I15.1	GenomeThreader_SGN_U_tomato	match_part	26549	26562	0.857	+	0	ID=GTH_SGN_U_tom_match_part_4;Target=SGN-U318979 107 120 -;Parent=SGN-U318979_alignment_1
C09SLe0009I15.1	GenomeThreader_SGN_U_tomato	match_part	26694	26706	0.615	+	0	ID=GTH_SGN_U_tom_match_part_5;Target=SGN-U318979 121 132 -;Parent=SGN-U318979_alignment_1
C09SLe0009I15.1	GenomeThreader_SGN_U_tomato	match_part	26949	26970	0.545	+	0	ID=GTH_SGN_U_tom_match_part_6;Target=SGN-U318979 133 155 -;Parent=SGN-U318979_alignment_1
C09SLe0009I15.1	GenomeThreader_SGN_U_tomato	match_part	27068	27132	0.723	+	0	ID=GTH_SGN_U_tom_match_part_7;Target=SGN-U318979 156 215 -;Parent=SGN-U318979_alignment_1
C09SLe0009I15.1	GenomeThreader_SGN_U_tomato	match_part	27192	28947	0.938	+	0	ID=GTH_SGN_U_tom_match_part_8;Target=SGN-U318979 216 1990 -;Parent=SGN-U318979_alignment_1
C09SLe0009I15.1	GenomeThreader_SGN_U_tomato	match	30332	30700	0.921	-	0	ID=SGN-U339612_alignment_1;Target=SGN-U339612 1 367 +
C09SLe0009I15.1	GenomeThreader_SGN_U_tomato	match_part	30332	30700	0.921	-	0	ID=GTH_SGN_U_tom_match_part_9;Target=SGN-U339612 1 367 +;Parent=SGN-U339612_alignment_1
C09SLe0009I15.1	GenomeThreader_SGN_U_tomato	match	44997	45236	0.929	-	0	ID=SGN-U324767_alignment_1;Target=SGN-U324767 1 240 +
C09SLe0009I15.1	GenomeThreader_SGN_U_tomato	match_part	44997	45236	0.929	-	0	ID=GTH_SGN_U_tom_match_part_10;Target=SGN-U324767 1 240 +;Parent=SGN-U324767_alignment_1
C09SLe0009I15.1	GenomeThreader_SGN_U_tomato	gene	14428	14836	.	+	0	ID=GTH_SGN_U_tom_gene_1
C09SLe0009I15.1	GenomeThreader_SGN_U_tomato	mRNA	14428	14836	.	+	0	ID=GTH_SGN_U_tom_gene_1_AGS_1;Parent=GTH_SGN_U_tom_gene_1
C09SLe0009I15.1	GenomeThreader_SGN_U_tomato	exon	14428	14836	0.924	+	0	ID=GTH_SGN_U_tom_exon_1;Parent=GTH_SGN_U_tom_gene_1_AGS_1
C09SLe0009I15.1	GenomeThreader_SGN_U_tomato	gene	16738	17520	.	-	0	ID=GTH_SGN_U_tom_gene_2
C09SLe0009I15.1	GenomeThreader_SGN_U_tomato	mRNA	16738	17520	.	-	0	ID=GTH_SGN_U_tom_gene_2_AGS_1;Parent=GTH_SGN_U_tom_gene_2
C09SLe0009I15.1	GenomeThreader_SGN_U_tomato	exon	16738	17520	0.926	-	0	ID=GTH_SGN_U_tom_exon_2;Parent=GTH_SGN_U_tom_gene_2_AGS_1
C09SLe0009I15.1	GenomeThreader_SGN_U_tomato	gene	23980	28947	.	+	0	ID=GTH_SGN_U_tom_gene_3
C09SLe0009I15.1	GenomeThreader_SGN_U_tomato	mRNA	23980	28947	.	+	0	ID=GTH_SGN_U_tom_gene_3_AGS_1;Parent=GTH_SGN_U_tom_gene_3
C09SLe0009I15.1	GenomeThreader_SGN_U_tomato	exon	23980	24016	0.676	+	0	ID=GTH_SGN_U_tom_exon_3;Parent=GTH_SGN_U_tom_gene_3_AGS_1
C09SLe0009I15.1	GenomeThreader_SGN_U_tomato	exon	26549	26562	0.857	+	0	ID=GTH_SGN_U_tom_exon_4;Parent=GTH_SGN_U_tom_gene_3_AGS_1
C09SLe0009I15.1	GenomeThreader_SGN_U_tomato	exon	26694	26706	0.615	+	0	ID=GTH_SGN_U_tom_exon_5;Parent=GTH_SGN_U_tom_gene_3_AGS_1
C09SLe0009I15.1	GenomeThreader_SGN_U_tomato	exon	26949	26970	0.545	+	0	ID=GTH_SGN_U_tom_exon_6;Parent=GTH_SGN_U_tom_gene_3_AGS_1
C09SLe0009I15.1	GenomeThreader_SGN_U_tomato	exon	27068	27132	0.723	+	0	ID=GTH_SGN_U_tom_exon_7;Parent=GTH_SGN_U_tom_gene_3_AGS_1
C09SLe0009I15.1	GenomeThreader_SGN_U_tomato	exon	27192	28947	0.938	+	0	ID=GTH_SGN_U_tom_exon_8;Parent=GTH_SGN_U_tom_gene_3_AGS_1
C09SLe0009I15.1	GenomeThreader_SGN_U_tomato	gene	30332	30700	.	-	0	ID=GTH_SGN_U_tom_gene_4
C09SLe0009I15.1	GenomeThreader_SGN_U_tomato	mRNA	30332	30700	.	-	0	ID=GTH_SGN_U_tom_gene_4_AGS_1;Parent=GTH_SGN_U_tom_gene_4
C09SLe0009I15.1	GenomeThreader_SGN_U_tomato	exon	30332	30700	0.921	-	0	ID=GTH_SGN_U_tom_exon_9;Parent=GTH_SGN_U_tom_gene_4_AGS_1
C09SLe0009I15.1	GenomeThreader_SGN_U_tomato	gene	44997	45236	.	-	0	ID=GTH_SGN_U_tom_gene_5
C09SLe0009I15.1	GenomeThreader_SGN_U_tomato	mRNA	44997	45236	.	-	0	ID=GTH_SGN_U_tom_gene_5_AGS_1;Parent=GTH_SGN_U_tom_gene_5
C09SLe0009I15.1	GenomeThreader_SGN_U_tomato	exon	44997	45236	0.929	-	0	ID=GTH_SGN_U_tom_exon_10;Parent=GTH_SGN_U_tom_gene_5_AGS_1
C09SLe0009I15.1	AUGUSTUS_tom_pot_cdna	gene	21825	23063	1	-	.	ID=g1_4
C09SLe0009I15.1	AUGUSTUS_tom_pot_cdna	transcript	21825	23063	.	-	.	ID=g1.t1_4;Parent=g1_4
C09SLe0009I15.1	AUGUSTUS_tom_pot_cdna	stop_codon	21825	21827	.	-	0	Parent=g1.t1_4
C09SLe0009I15.1	AUGUSTUS_tom_pot_cdna	CDS	21825	23063	.	-	0	ID=g1.t1.cds_4;Parent=g1.t1_4
C09SLe0009I15.1	AUGUSTUS_tom_pot_cdna	start_codon	23061	23063	.	-	0	Parent=g1.t1_4
C09SLe0009I15.1	AUGUSTUS_tom_pot_cdna	gene	65121	70698	1	+	.	ID=g2_4
C09SLe0009I15.1	AUGUSTUS_tom_pot_cdna	transcript	65121	70698	.	+	.	ID=g2.t1_4;Parent=g2_4
C09SLe0009I15.1	AUGUSTUS_tom_pot_cdna	start_codon	65121	65123	.	+	0	Parent=g2.t1_4
C09SLe0009I15.1	AUGUSTUS_tom_pot_cdna	CDS	65121	65479	.	+	0	ID=g2.t1.cds_6;Parent=g2.t1_4
C09SLe0009I15.1	AUGUSTUS_tom_pot_cdna	CDS	70647	70698	.	+	1	ID=g2.t1.cds_7;Parent=g2.t1_4
C09SLe0009I15.1	AUGUSTUS_tom_pot_cdna	stop_codon	70696	70698	.	+	0	Parent=g2.t1_4
C09SLe0009I15.1	AUGUSTUS_tom_pot_cdna	gene	73806	75068	1	-	.	ID=g3_4
C09SLe0009I15.1	AUGUSTUS_tom_pot_cdna	transcript	73806	75068	.	-	.	ID=g3.t1_4;Parent=g3_4
C09SLe0009I15.1	AUGUSTUS_tom_pot_cdna	stop_codon	73806	73808	.	-	0	Parent=g3.t1_4
C09SLe0009I15.1	AUGUSTUS_tom_pot_cdna	CDS	73806	75068	.	-	0	ID=g3.t1.cds_4;Parent=g3.t1_4
C09SLe0009I15.1	AUGUSTUS_tom_pot_cdna	start_codon	75066	75068	.	-	0	Parent=g3.t1_4
C09SLe0009I15.1	AUGUSTUS_tom_pot_cdna	gene	90455	90629	1	-	.	ID=g4_1
C09SLe0009I15.1	AUGUSTUS_tom_pot_cdna	transcript	90455	90629	.	-	.	ID=g4.t1_1;Parent=g4_1
C09SLe0009I15.1	AUGUSTUS_tom_pot_cdna	stop_codon	90455	90457	.	-	0	Parent=g4.t1_1
C09SLe0009I15.1	AUGUSTUS_tom_pot_cdna	CDS	90455	90629	.	-	1	ID=g4.t1.cds_1;Parent=g4.t1_1
C09SLe0009I15.1	BLAST_ath_pep	match	30968	32008	177	-	0	ID=AT2G04135.1_fwd_alignment_1;blast_gaps=7;Target=AT2G04135.1 1 282 +;blast_percent_identity=35.10;blast_mismatches=221;blast_evalue=1e-42
C09SLe0009I15.1	BLAST_ath_pep	match	69632	69751	28.9	-	0	ID=AT3G13010.1_fwd_alignment_1;blast_gaps=1;Target=AT3G13010.1 6 42 +;blast_percent_identity=32.50;blast_mismatches=27;blast_evalue=4e-21
C09SLe0009I15.1	BLAST_ath_pep	match	69106	69609	97.8	-	0	ID=AT3G13010.1_fwd_alignment_2;blast_gaps=2;Target=AT3G13010.1 79 249 +;blast_percent_identity=36.26;blast_mismatches=106;blast_evalue=4e-21
C09SLe0009I15.1	BLAST_ath_pep	match	68995	69609	112	-	0	ID=AT3G13020.1_fwd_alignment_1;blast_gaps=4;Target=AT3G13020.1 116 309 +;blast_percent_identity=38.54;blast_mismatches=126;blast_evalue=3e-23
C09SLe0009I15.1	BLAST_ath_pep	match	31490	32008	157	-	0	ID=AT3G29220.1_fwd_alignment_1;blast_gaps=0;Target=AT3G29220.1 1 173 +;blast_percent_identity=46.24;blast_mismatches=93;blast_evalue=6e-37
C09SLe0009I15.1	BLAST_ath_pep	match	31423	31482	21.9	-	0	ID=AT3G29220.1_fwd_alignment_2;blast_gaps=0;Target=AT3G29220.1 177 196 +;blast_percent_identity=50.00;blast_mismatches=10;blast_evalue=6e-37
C09SLe0009I15.1	BLAST_ath_pep	match	31226	32008	189	-	0	ID=AT3G30843.1_fwd_alignment_1;blast_gaps=4;Target=AT3G30843.1 1 271 +;blast_percent_identity=41.45;blast_mismatches=147;blast_evalue=2e-46
C09SLe0009I15.1	BLAST_ath_pep	match	31484	31948	124	-	0	ID=AT4G08056.1_fwd_alignment_1;blast_gaps=0;Target=AT4G08056.1 2 156 +;blast_percent_identity=40.65;blast_mismatches=92;blast_evalue=1e-27
C09SLe0009I15.1	BLAST_ath_pep	match	31417	31482	23.9	-	0	ID=AT4G08056.1_fwd_alignment_2;blast_gaps=0;Target=AT4G08056.1 158 179 +;blast_percent_identity=45.45;blast_mismatches=12;blast_evalue=1e-27
C09SLe0009I15.1	BLAST_ath_pep	match	27923	28921	130	-	0	ID=AT4G23160.1_fwd_alignment_1;blast_gaps=8;Target=AT4G23160.1 85 404 +;blast_percent_identity=31.36;blast_mismatches=227;blast_evalue=8e-46
C09SLe0009I15.1	BLAST_ath_pep	match	27483	27947	79.0	-	0	ID=AT4G23160.1_fwd_alignment_2;blast_gaps=2;Target=AT4G23160.1 397 544 +;blast_percent_identity=32.90;blast_mismatches=104;blast_evalue=8e-46
C09SLe0009I15.1	BLAST_ath_pep	match	45682	47133	279	-	0	ID=AT4G23160.1_fwd_alignment_3;blast_gaps=8;Target=AT4G23160.1 78 554 +;blast_percent_identity=36.33;blast_mismatches=306;blast_evalue=2e-73
C09SLe0009I15.1	BLAST_ath_pep	match	31178	32008	180	-	0	ID=AT5G32482.1_fwd_alignment_1;blast_gaps=4;Target=AT5G32482.1 1 302 +;blast_percent_identity=35.60;blast_mismatches=167;blast_evalue=2e-43
C09SLe0009I15.1	BLAST_ath_pep	match	31244	31987	184	-	0	ID=AT5G33303.1_fwd_alignment_1;blast_gaps=5;Target=AT5G33303.1 4 257 +;blast_percent_identity=43.80;blast_mismatches=135;blast_evalue=7e-45
C09SLe0009I15.1	BLAST_ath_pep	match	45832	46518	110	-	0	ID=ATMG00810.1_fwd_alignment_1;blast_gaps=7;Target=ATMG00810.1 6 225 +;blast_percent_identity=37.23;blast_mismatches=143;blast_evalue=2e-22