##gff-version 3
##sequence-region C09SLf0089D12.1 1 32889
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	match	4008	4518	0.992	-	0	ID=SGN-E244176_alignment_1;Target=SGN-E244176 1 511 +
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	match_part	4008	4518	0.992	-	0	ID=GTH_SGN_E_tom_potato_match_part_1;Target=SGN-E244176 1 511 +;Parent=SGN-E244176_alignment_1
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	match	8062	8606	0.983	-	0	ID=SGN-E744706_alignment_1;Target=SGN-E744706 1 544 +
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	match_part	8062	8606	0.983	-	0	ID=GTH_SGN_E_tom_potato_match_part_2;Target=SGN-E744706 1 544 +;Parent=SGN-E744706_alignment_1
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	match	19376	20245	0.998	-	0	ID=SGN-E733650_alignment_1;Target=SGN-E733650 1 581 +
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	match_part	20187	20245	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_3;Target=SGN-E733650 1 59 +;Parent=SGN-E733650_alignment_1
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	match_part	19920	20035	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_4;Target=SGN-E733650 60 175 +;Parent=SGN-E733650_alignment_1
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	match_part	19453	19845	0.997	-	0	ID=GTH_SGN_E_tom_potato_match_part_5;Target=SGN-E733650 176 568 +;Parent=SGN-E733650_alignment_1
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	match_part	19376	19388	0.692	-	0	ID=GTH_SGN_E_tom_potato_match_part_6;Target=SGN-E733650 569 581 +;Parent=SGN-E733650_alignment_1
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	match	19493	20472	0.959	-	0	ID=SGN-E601533_alignment_1;Target=SGN-E601533 1 629 -
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	match_part	20428	20472	0.956	-	0	ID=GTH_SGN_E_tom_potato_match_part_7;Target=SGN-E601533 1 45 -;Parent=SGN-E601533_alignment_1
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	match_part	20187	20299	0.956	-	0	ID=GTH_SGN_E_tom_potato_match_part_8;Target=SGN-E601533 46 158 -;Parent=SGN-E601533_alignment_1
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	match_part	19920	20035	0.974	-	0	ID=GTH_SGN_E_tom_potato_match_part_9;Target=SGN-E601533 159 274 -;Parent=SGN-E601533_alignment_1
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	match_part	19493	19845	0.955	-	0	ID=GTH_SGN_E_tom_potato_match_part_10;Target=SGN-E601533 275 629 -;Parent=SGN-E601533_alignment_1
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	match	19676	21512	0.999	-	0	ID=SGN-E707824_alignment_1;Target=SGN-E707824 1 870 +
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	match_part	21478	21512	0.943	-	0	ID=GTH_SGN_E_tom_potato_match_part_11;Target=SGN-E707824 1 35 +;Parent=SGN-E707824_alignment_1
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	match_part	20858	21034	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_12;Target=SGN-E707824 36 212 +;Parent=SGN-E707824_alignment_1
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	match_part	20652	20771	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_13;Target=SGN-E707824 213 332 +;Parent=SGN-E707824_alignment_1
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	match_part	20428	20566	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_14;Target=SGN-E707824 333 471 +;Parent=SGN-E707824_alignment_1
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	match_part	20187	20299	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_15;Target=SGN-E707824 472 584 +;Parent=SGN-E707824_alignment_1
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	match_part	19920	20035	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_16;Target=SGN-E707824 585 700 +;Parent=SGN-E707824_alignment_1
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	match_part	19676	19845	0.994	-	0	ID=GTH_SGN_E_tom_potato_match_part_17;Target=SGN-E707824 701 870 +;Parent=SGN-E707824_alignment_1
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	match	19711	20672	0.996	-	0	ID=SGN-E240222_alignment_1;Target=SGN-E240222 1 524 +
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	match_part	20652	20672	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_18;Target=SGN-E240222 1 21 +;Parent=SGN-E240222_alignment_1
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	match_part	20428	20566	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_19;Target=SGN-E240222 22 160 +;Parent=SGN-E240222_alignment_1
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	match_part	20187	20299	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_20;Target=SGN-E240222 161 273 +;Parent=SGN-E240222_alignment_1
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	match_part	19920	20035	0.991	-	0	ID=GTH_SGN_E_tom_potato_match_part_21;Target=SGN-E240222 274 389 +;Parent=SGN-E240222_alignment_1
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	match_part	19711	19845	0.993	-	0	ID=GTH_SGN_E_tom_potato_match_part_22;Target=SGN-E240222 390 524 +;Parent=SGN-E240222_alignment_1
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	match	19966	21015	1.000	-	0	ID=SGN-E256473_alignment_1;Target=SGN-E256473 1 600 +
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	match_part	20858	21015	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_23;Target=SGN-E256473 1 158 +;Parent=SGN-E256473_alignment_1
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	match_part	20652	20771	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_24;Target=SGN-E256473 159 278 +;Parent=SGN-E256473_alignment_1
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	match_part	20428	20566	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_25;Target=SGN-E256473 279 417 +;Parent=SGN-E256473_alignment_1
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	match_part	20187	20299	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_26;Target=SGN-E256473 418 530 +;Parent=SGN-E256473_alignment_1
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	match_part	19966	20035	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_27;Target=SGN-E256473 531 600 +;Parent=SGN-E256473_alignment_1
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	match	20019	21016	1.000	-	0	ID=SGN-E551458_alignment_1;Target=SGN-E551458 1 548 +
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	match_part	20858	21016	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_28;Target=SGN-E551458 1 159 +;Parent=SGN-E551458_alignment_1
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	match_part	20652	20771	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_29;Target=SGN-E551458 160 279 +;Parent=SGN-E551458_alignment_1
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	match_part	20428	20566	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_30;Target=SGN-E551458 280 418 +;Parent=SGN-E551458_alignment_1
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	match_part	20187	20299	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_31;Target=SGN-E551458 419 531 +;Parent=SGN-E551458_alignment_1
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	match_part	20019	20035	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_32;Target=SGN-E551458 532 548 +;Parent=SGN-E551458_alignment_1
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	match	20019	21016	1.000	-	0	ID=SGN-E688735_alignment_1;Target=SGN-E688735 1 548 +
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	match_part	20858	21016	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_33;Target=SGN-E688735 1 159 +;Parent=SGN-E688735_alignment_1
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	match_part	20652	20771	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_34;Target=SGN-E688735 160 279 +;Parent=SGN-E688735_alignment_1
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	match_part	20428	20566	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_35;Target=SGN-E688735 280 418 +;Parent=SGN-E688735_alignment_1
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	match_part	20187	20299	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_36;Target=SGN-E688735 419 531 +;Parent=SGN-E688735_alignment_1
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	match_part	20019	20035	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_37;Target=SGN-E688735 532 548 +;Parent=SGN-E688735_alignment_1
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	match	22928	24923	0.994	-	0	ID=SGN-E737991_alignment_1;Target=SGN-E737991 1 856 +
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	match_part	24839	24923	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_38;Target=SGN-E737991 1 85 +;Parent=SGN-E737991_alignment_1
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	match_part	24660	24756	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_39;Target=SGN-E737991 86 182 +;Parent=SGN-E737991_alignment_1
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	match_part	24373	24419	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_40;Target=SGN-E737991 183 229 +;Parent=SGN-E737991_alignment_1
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	match_part	24055	24253	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_41;Target=SGN-E737991 230 428 +;Parent=SGN-E737991_alignment_1
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	match_part	23485	23551	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_42;Target=SGN-E737991 429 495 +;Parent=SGN-E737991_alignment_1
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	match_part	23185	23361	0.994	-	0	ID=GTH_SGN_E_tom_potato_match_part_43;Target=SGN-E737991 496 672 +;Parent=SGN-E737991_alignment_1
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	match_part	22928	23111	0.978	-	0	ID=GTH_SGN_E_tom_potato_match_part_44;Target=SGN-E737991 673 856 +;Parent=SGN-E737991_alignment_1
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	match	24378	26078	0.958	-	0	ID=SGN-E740164_alignment_1;Target=SGN-E740164 1 621 +
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	match_part	25846	26078	0.957	-	0	ID=GTH_SGN_E_tom_potato_match_part_45;Target=SGN-E740164 1 234 +;Parent=SGN-E740164_alignment_1
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	match_part	25082	25186	0.971	-	0	ID=GTH_SGN_E_tom_potato_match_part_46;Target=SGN-E740164 235 339 +;Parent=SGN-E740164_alignment_1
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	match_part	24839	24981	0.958	-	0	ID=GTH_SGN_E_tom_potato_match_part_47;Target=SGN-E740164 340 482 +;Parent=SGN-E740164_alignment_1
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	match_part	24660	24756	0.948	-	0	ID=GTH_SGN_E_tom_potato_match_part_48;Target=SGN-E740164 483 579 +;Parent=SGN-E740164_alignment_1
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	match_part	24378	24419	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_49;Target=SGN-E740164 580 621 +;Parent=SGN-E740164_alignment_1
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	match	29985	30953	0.985	+	0	ID=SGN-E324859_alignment_1;Target=SGN-E324859 1 455 +
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	match_part	29985	30143	0.981	+	0	ID=GTH_SGN_E_tom_potato_match_part_50;Target=SGN-E324859 1 159 +;Parent=SGN-E324859_alignment_1
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	match_part	30658	30953	0.986	+	0	ID=GTH_SGN_E_tom_potato_match_part_51;Target=SGN-E324859 160 455 +;Parent=SGN-E324859_alignment_1
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	match	30047	31304	0.966	+	0	ID=SGN-E389520_alignment_1;Target=SGN-E389520 1 743 +
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	match_part	30047	30143	0.918	+	0	ID=GTH_SGN_E_tom_potato_match_part_52;Target=SGN-E389520 1 96 +;Parent=SGN-E389520_alignment_1
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	match_part	30658	31304	0.974	+	0	ID=GTH_SGN_E_tom_potato_match_part_53;Target=SGN-E389520 97 743 +;Parent=SGN-E389520_alignment_1
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	match	30055	31200	1.000	+	0	ID=SGN-E550171_alignment_1;Target=SGN-E550171 1 632 +
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	match_part	30055	30143	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_54;Target=SGN-E550171 1 89 +;Parent=SGN-E550171_alignment_1
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	match_part	30658	31200	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_55;Target=SGN-E550171 90 632 +;Parent=SGN-E550171_alignment_1
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	match	30056	31168	0.998	+	0	ID=SGN-E244669_alignment_1;Target=SGN-E244669 1 599 +
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	match_part	30056	30143	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_56;Target=SGN-E244669 1 88 +;Parent=SGN-E244669_alignment_1
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	match_part	30658	31168	0.998	+	0	ID=GTH_SGN_E_tom_potato_match_part_57;Target=SGN-E244669 89 599 +;Parent=SGN-E244669_alignment_1
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	match	30056	31079	0.994	+	0	ID=SGN-E226955_alignment_1;Target=SGN-E226955 1 510 +
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	match_part	30056	30143	0.977	+	0	ID=GTH_SGN_E_tom_potato_match_part_58;Target=SGN-E226955 1 88 +;Parent=SGN-E226955_alignment_1
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	match_part	30658	31079	0.998	+	0	ID=GTH_SGN_E_tom_potato_match_part_59;Target=SGN-E226955 89 510 +;Parent=SGN-E226955_alignment_1
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	match	30056	31079	1.000	+	0	ID=SGN-E241423_alignment_1;Target=SGN-E241423 1 510 +
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	match_part	30056	30143	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_60;Target=SGN-E241423 1 88 +;Parent=SGN-E241423_alignment_1
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	match_part	30658	31079	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_61;Target=SGN-E241423 89 510 +;Parent=SGN-E241423_alignment_1
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	match	30546	31078	1.000	+	0	ID=SGN-E241675_alignment_1;Target=SGN-E241675 1 533 +
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	match_part	30546	31078	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_62;Target=SGN-E241675 1 533 +;Parent=SGN-E241675_alignment_1
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	match	30662	31361	1.000	+	0	ID=SGN-E377414_alignment_1;Target=SGN-E377414 1 700 +
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	match_part	30662	31361	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_63;Target=SGN-E377414 1 700 +;Parent=SGN-E377414_alignment_1
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	match	30662	31313	1.000	+	0	ID=SGN-E238385_alignment_1;Target=SGN-E238385 1 652 +
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	match_part	30662	31313	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_64;Target=SGN-E238385 1 652 +;Parent=SGN-E238385_alignment_1
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	match	30662	31248	1.000	+	0	ID=SGN-E236435_alignment_1;Target=SGN-E236435 1 587 +
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	match_part	30662	31248	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_65;Target=SGN-E236435 1 587 +;Parent=SGN-E236435_alignment_1
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	match	30662	31190	1.000	+	0	ID=SGN-E241797_alignment_1;Target=SGN-E241797 1 529 +
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	match_part	30662	31190	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_66;Target=SGN-E241797 1 529 +;Parent=SGN-E241797_alignment_1
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	match	30662	30907	0.992	+	0	ID=SGN-E240001_alignment_1;Target=SGN-E240001 1 247 +
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	match_part	30662	30907	0.992	+	0	ID=GTH_SGN_E_tom_potato_match_part_67;Target=SGN-E240001 1 247 +;Parent=SGN-E240001_alignment_1
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	match	30688	30902	0.930	+	0	ID=SGN-E239864_alignment_1;Target=SGN-E239864 1 216 +
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	match_part	30688	30902	0.930	+	0	ID=GTH_SGN_E_tom_potato_match_part_68;Target=SGN-E239864 1 216 +;Parent=SGN-E239864_alignment_1
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	match	30879	31534	0.995	+	0	ID=SGN-E377413_alignment_1;Target=SGN-E377413 1 656 +
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	match_part	30879	31534	0.995	+	0	ID=GTH_SGN_E_tom_potato_match_part_69;Target=SGN-E377413 1 656 +;Parent=SGN-E377413_alignment_1
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	match	30882	31602	1.000	+	0	ID=SGN-E550421_alignment_1;Target=SGN-E550421 1 721 +
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	match_part	30882	31602	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_70;Target=SGN-E550421 1 721 +;Parent=SGN-E550421_alignment_1
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	match	31012	31630	0.997	+	0	ID=SGN-E389521_alignment_1;Target=SGN-E389521 1 618 +
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	match_part	31012	31630	0.997	+	0	ID=GTH_SGN_E_tom_potato_match_part_71;Target=SGN-E389521 1 618 +;Parent=SGN-E389521_alignment_1
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	gene	4008	4518	.	-	0	ID=GTH_SGN_E_tom_potato_gene_1
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	mRNA	4008	4518	.	-	0	ID=GTH_SGN_E_tom_potato_gene_1_AGS_1;Parent=GTH_SGN_E_tom_potato_gene_1
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	exon	4008	4518	0.992	-	0	ID=GTH_SGN_E_tom_potato_exon_1;Parent=GTH_SGN_E_tom_potato_gene_1_AGS_1
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	gene	8062	8606	.	-	0	ID=GTH_SGN_E_tom_potato_gene_2
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	mRNA	8062	8606	.	-	0	ID=GTH_SGN_E_tom_potato_gene_2_AGS_1;Parent=GTH_SGN_E_tom_potato_gene_2
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	exon	8062	8606	0.983	-	0	ID=GTH_SGN_E_tom_potato_exon_2;Parent=GTH_SGN_E_tom_potato_gene_2_AGS_1
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	gene	19376	21512	.	-	0	ID=GTH_SGN_E_tom_potato_gene_3
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	mRNA	19376	21512	.	-	0	ID=GTH_SGN_E_tom_potato_gene_3_AGS_1;Parent=GTH_SGN_E_tom_potato_gene_3
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	exon	21478	21512	0.943	-	0	ID=GTH_SGN_E_tom_potato_exon_3;Parent=GTH_SGN_E_tom_potato_gene_3_AGS_1
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	exon	20858	21034	1.000	-	0	ID=GTH_SGN_E_tom_potato_exon_4;Parent=GTH_SGN_E_tom_potato_gene_3_AGS_1
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	exon	20652	20771	1.000	-	0	ID=GTH_SGN_E_tom_potato_exon_5;Parent=GTH_SGN_E_tom_potato_gene_3_AGS_1
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	exon	20428	20566	1.000	-	0	ID=GTH_SGN_E_tom_potato_exon_6;Parent=GTH_SGN_E_tom_potato_gene_3_AGS_1
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	exon	20187	20299	1.000	-	0	ID=GTH_SGN_E_tom_potato_exon_7;Parent=GTH_SGN_E_tom_potato_gene_3_AGS_1
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	exon	19920	20035	1.000	-	0	ID=GTH_SGN_E_tom_potato_exon_8;Parent=GTH_SGN_E_tom_potato_gene_3_AGS_1
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	exon	19453	19845	0.997	-	0	ID=GTH_SGN_E_tom_potato_exon_9;Parent=GTH_SGN_E_tom_potato_gene_3_AGS_1
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	exon	19376	19388	0.692	-	0	ID=GTH_SGN_E_tom_potato_exon_10;Parent=GTH_SGN_E_tom_potato_gene_3_AGS_1
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	gene	22928	26078	.	-	0	ID=GTH_SGN_E_tom_potato_gene_4
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	mRNA	22928	26078	.	-	0	ID=GTH_SGN_E_tom_potato_gene_4_AGS_1;Parent=GTH_SGN_E_tom_potato_gene_4
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	exon	25846	26078	0.957	-	0	ID=GTH_SGN_E_tom_potato_exon_11;Parent=GTH_SGN_E_tom_potato_gene_4_AGS_1
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	exon	25082	25186	0.971	-	0	ID=GTH_SGN_E_tom_potato_exon_12;Parent=GTH_SGN_E_tom_potato_gene_4_AGS_1
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	exon	24839	24981	0.958	-	0	ID=GTH_SGN_E_tom_potato_exon_13;Parent=GTH_SGN_E_tom_potato_gene_4_AGS_1
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	exon	24660	24756	1.000	-	0	ID=GTH_SGN_E_tom_potato_exon_14;Parent=GTH_SGN_E_tom_potato_gene_4_AGS_1
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	exon	24373	24419	1.000	-	0	ID=GTH_SGN_E_tom_potato_exon_15;Parent=GTH_SGN_E_tom_potato_gene_4_AGS_1
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	exon	24055	24253	1.000	-	0	ID=GTH_SGN_E_tom_potato_exon_16;Parent=GTH_SGN_E_tom_potato_gene_4_AGS_1
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	exon	23485	23551	1.000	-	0	ID=GTH_SGN_E_tom_potato_exon_17;Parent=GTH_SGN_E_tom_potato_gene_4_AGS_1
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	exon	23185	23361	0.994	-	0	ID=GTH_SGN_E_tom_potato_exon_18;Parent=GTH_SGN_E_tom_potato_gene_4_AGS_1
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	exon	22928	23111	0.978	-	0	ID=GTH_SGN_E_tom_potato_exon_19;Parent=GTH_SGN_E_tom_potato_gene_4_AGS_1
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	gene	29985	31630	.	+	0	ID=GTH_SGN_E_tom_potato_gene_5
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	mRNA	29985	31630	.	+	0	ID=GTH_SGN_E_tom_potato_gene_5_AGS_1;Parent=GTH_SGN_E_tom_potato_gene_5
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	exon	29985	30143	0.981	+	0	ID=GTH_SGN_E_tom_potato_exon_20;Parent=GTH_SGN_E_tom_potato_gene_5_AGS_1
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	exon	30658	31630	1.000	+	0	ID=GTH_SGN_E_tom_potato_exon_21;Parent=GTH_SGN_E_tom_potato_gene_5_AGS_1
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	mRNA	30546	31630	.	+	0	ID=GTH_SGN_E_tom_potato_gene_5_AGS_2;Parent=GTH_SGN_E_tom_potato_gene_5
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato_potato	exon	30546	31630	1.000	+	0	ID=GTH_SGN_E_tom_potato_exon_22;Parent=GTH_SGN_E_tom_potato_gene_5_AGS_2
C09SLf0089D12.1	RepeatMasker	nucleotide_motif	16167	16365	631	-	0	ID=Gypsy00043_alignment_1;Target=Gypsy00043 12841 13035 -
C09SLf0089D12.1	RepeatMasker	nucleotide_motif	24480	24559	306	-	0	ID=SONATA1_alignment_1;Target=SONATA1 159 242 -
C09SLf0089D12.1	RepeatMasker	nucleotide_motif	27038	27106	230	+	0	ID=HELMET3_alignment_1;Target=HELMET3 3685 3754 +
C09SLf0089D12.1	RepeatMasker	nucleotide_motif	27069	27136	245	-	0	ID=Gypsy00019_alignment_1;Target=Gypsy00019 568 638 -
C09SLf0089D12.1	RepeatMasker	nucleotide_motif	27122	27195	235	-	0	ID=Gypsy00073_alignment_1;Target=Gypsy00073 1766 1838 -
C09SLf0089D12.1	RepeatMasker	nucleotide_motif	27293	27414	328	-	0	ID=Gypsy00073_alignment_2;Target=Gypsy00073 1653 1752 -
C09SLf0089D12.1	RepeatMasker	nucleotide_motif	27425	27472	228	+	0	ID=MUDSOLT1_alignment_1;Target=MUDSOLT1 484 530 +
C09SLf0089D12.1	RepeatMasker	nucleotide_motif	31845	31951	364	-	0	ID=Copia00172_alignment_1;Target=Copia00172 5234 5337 -
C09SLf0089D12.1	RepeatMasker	nucleotide_motif	32656	32775	498	-	0	ID=TS2_alignment_1;Target=TS2 527 655 -
C09SLf0089D12.1	BLAST_tomato_bacs	match	31241	32889	3108	+	0	ID=C09HBa0022M02.1_rev_alignment_1;blast_gaps=0;Target=clone-C09HBa0022M02.1 110102 111750 -;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=0.0
C09SLf0089D12.1	Contigs	contig	1	10936	.	.	0	ID=contig1_1;length=10936
C09SLf0089D12.1	Contigs	contig	11037	32889	.	.	0	ID=contig2_1;length=21853
C09SLf0089D12.1	BLAST_tomato_bac_ends	clone_end	31357	31974	1130	+	0	ID=C09SLf0089D12.1-LE_HBa0022M02_SP6_133815_1;blast_gaps=0;Target=LE_HBa0022M02_SP6_133815 1 618 +;is_problematic=0;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=0.0
C09SLf0089D12.1	BLAST_tomato_bac_ends	clone_end	32522	32889	729	-	0	ID=C09SLf0089D12.1-SL_FOS0089D12_pIBR_511136_1;blast_gaps=0;Target=SL_FOS0089D12_pIBR_511136 3 370 +;is_problematic=0;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=0.0
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	match	4008	4518	0.992	-	0	ID=SGN-E244176_alignment_2;Target=SGN-E244176 1 511 +
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	match_part	4008	4518	0.992	-	0	ID=GTH_SGN_E_tom_match_part_1;Target=SGN-E244176 1 511 +;Parent=SGN-E244176_alignment_2
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	match	8062	8606	0.983	-	0	ID=SGN-E744706_alignment_2;Target=SGN-E744706 1 544 +
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	match_part	8062	8606	0.983	-	0	ID=GTH_SGN_E_tom_match_part_2;Target=SGN-E744706 1 544 +;Parent=SGN-E744706_alignment_2
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	match	19376	20245	0.998	-	0	ID=SGN-E733650_alignment_2;Target=SGN-E733650 1 581 +
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	match_part	20187	20245	1.000	-	0	ID=GTH_SGN_E_tom_match_part_3;Target=SGN-E733650 1 59 +;Parent=SGN-E733650_alignment_2
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	match_part	19920	20035	1.000	-	0	ID=GTH_SGN_E_tom_match_part_4;Target=SGN-E733650 60 175 +;Parent=SGN-E733650_alignment_2
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	match_part	19453	19845	0.997	-	0	ID=GTH_SGN_E_tom_match_part_5;Target=SGN-E733650 176 568 +;Parent=SGN-E733650_alignment_2
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	match_part	19376	19388	0.692	-	0	ID=GTH_SGN_E_tom_match_part_6;Target=SGN-E733650 569 581 +;Parent=SGN-E733650_alignment_2
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	match	19676	21512	0.999	-	0	ID=SGN-E707824_alignment_2;Target=SGN-E707824 1 870 +
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	match_part	21478	21512	0.943	-	0	ID=GTH_SGN_E_tom_match_part_7;Target=SGN-E707824 1 35 +;Parent=SGN-E707824_alignment_2
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	match_part	20858	21034	1.000	-	0	ID=GTH_SGN_E_tom_match_part_8;Target=SGN-E707824 36 212 +;Parent=SGN-E707824_alignment_2
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	match_part	20652	20771	1.000	-	0	ID=GTH_SGN_E_tom_match_part_9;Target=SGN-E707824 213 332 +;Parent=SGN-E707824_alignment_2
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	match_part	20428	20566	1.000	-	0	ID=GTH_SGN_E_tom_match_part_10;Target=SGN-E707824 333 471 +;Parent=SGN-E707824_alignment_2
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	match_part	20187	20299	1.000	-	0	ID=GTH_SGN_E_tom_match_part_11;Target=SGN-E707824 472 584 +;Parent=SGN-E707824_alignment_2
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	match_part	19920	20035	1.000	-	0	ID=GTH_SGN_E_tom_match_part_12;Target=SGN-E707824 585 700 +;Parent=SGN-E707824_alignment_2
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	match_part	19676	19845	0.994	-	0	ID=GTH_SGN_E_tom_match_part_13;Target=SGN-E707824 701 870 +;Parent=SGN-E707824_alignment_2
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	match	19711	20672	0.996	-	0	ID=SGN-E240222_alignment_2;Target=SGN-E240222 1 524 +
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	match_part	20652	20672	1.000	-	0	ID=GTH_SGN_E_tom_match_part_14;Target=SGN-E240222 1 21 +;Parent=SGN-E240222_alignment_2
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	match_part	20428	20566	1.000	-	0	ID=GTH_SGN_E_tom_match_part_15;Target=SGN-E240222 22 160 +;Parent=SGN-E240222_alignment_2
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	match_part	20187	20299	1.000	-	0	ID=GTH_SGN_E_tom_match_part_16;Target=SGN-E240222 161 273 +;Parent=SGN-E240222_alignment_2
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	match_part	19920	20035	0.991	-	0	ID=GTH_SGN_E_tom_match_part_17;Target=SGN-E240222 274 389 +;Parent=SGN-E240222_alignment_2
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	match_part	19711	19845	0.993	-	0	ID=GTH_SGN_E_tom_match_part_18;Target=SGN-E240222 390 524 +;Parent=SGN-E240222_alignment_2
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	match	19966	21015	1.000	-	0	ID=SGN-E256473_alignment_2;Target=SGN-E256473 1 600 +
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	match_part	20858	21015	1.000	-	0	ID=GTH_SGN_E_tom_match_part_19;Target=SGN-E256473 1 158 +;Parent=SGN-E256473_alignment_2
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	match_part	20652	20771	1.000	-	0	ID=GTH_SGN_E_tom_match_part_20;Target=SGN-E256473 159 278 +;Parent=SGN-E256473_alignment_2
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	match_part	20428	20566	1.000	-	0	ID=GTH_SGN_E_tom_match_part_21;Target=SGN-E256473 279 417 +;Parent=SGN-E256473_alignment_2
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	match_part	20187	20299	1.000	-	0	ID=GTH_SGN_E_tom_match_part_22;Target=SGN-E256473 418 530 +;Parent=SGN-E256473_alignment_2
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	match_part	19966	20035	1.000	-	0	ID=GTH_SGN_E_tom_match_part_23;Target=SGN-E256473 531 600 +;Parent=SGN-E256473_alignment_2
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	match	20019	21016	1.000	-	0	ID=SGN-E551458_alignment_2;Target=SGN-E551458 1 548 +
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	match_part	20858	21016	1.000	-	0	ID=GTH_SGN_E_tom_match_part_24;Target=SGN-E551458 1 159 +;Parent=SGN-E551458_alignment_2
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	match_part	20652	20771	1.000	-	0	ID=GTH_SGN_E_tom_match_part_25;Target=SGN-E551458 160 279 +;Parent=SGN-E551458_alignment_2
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	match_part	20428	20566	1.000	-	0	ID=GTH_SGN_E_tom_match_part_26;Target=SGN-E551458 280 418 +;Parent=SGN-E551458_alignment_2
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	match_part	20187	20299	1.000	-	0	ID=GTH_SGN_E_tom_match_part_27;Target=SGN-E551458 419 531 +;Parent=SGN-E551458_alignment_2
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	match_part	20019	20035	1.000	-	0	ID=GTH_SGN_E_tom_match_part_28;Target=SGN-E551458 532 548 +;Parent=SGN-E551458_alignment_2
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	match	20019	21016	1.000	-	0	ID=SGN-E688735_alignment_2;Target=SGN-E688735 1 548 +
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	match_part	20858	21016	1.000	-	0	ID=GTH_SGN_E_tom_match_part_29;Target=SGN-E688735 1 159 +;Parent=SGN-E688735_alignment_2
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	match_part	20652	20771	1.000	-	0	ID=GTH_SGN_E_tom_match_part_30;Target=SGN-E688735 160 279 +;Parent=SGN-E688735_alignment_2
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	match_part	20428	20566	1.000	-	0	ID=GTH_SGN_E_tom_match_part_31;Target=SGN-E688735 280 418 +;Parent=SGN-E688735_alignment_2
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	match_part	20187	20299	1.000	-	0	ID=GTH_SGN_E_tom_match_part_32;Target=SGN-E688735 419 531 +;Parent=SGN-E688735_alignment_2
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	match_part	20019	20035	1.000	-	0	ID=GTH_SGN_E_tom_match_part_33;Target=SGN-E688735 532 548 +;Parent=SGN-E688735_alignment_2
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	match	22928	24923	0.994	-	0	ID=SGN-E737991_alignment_2;Target=SGN-E737991 1 856 +
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	match_part	24839	24923	1.000	-	0	ID=GTH_SGN_E_tom_match_part_34;Target=SGN-E737991 1 85 +;Parent=SGN-E737991_alignment_2
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	match_part	24660	24756	1.000	-	0	ID=GTH_SGN_E_tom_match_part_35;Target=SGN-E737991 86 182 +;Parent=SGN-E737991_alignment_2
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	match_part	24373	24419	1.000	-	0	ID=GTH_SGN_E_tom_match_part_36;Target=SGN-E737991 183 229 +;Parent=SGN-E737991_alignment_2
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	match_part	24055	24253	1.000	-	0	ID=GTH_SGN_E_tom_match_part_37;Target=SGN-E737991 230 428 +;Parent=SGN-E737991_alignment_2
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	match_part	23485	23551	1.000	-	0	ID=GTH_SGN_E_tom_match_part_38;Target=SGN-E737991 429 495 +;Parent=SGN-E737991_alignment_2
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	match_part	23185	23361	0.994	-	0	ID=GTH_SGN_E_tom_match_part_39;Target=SGN-E737991 496 672 +;Parent=SGN-E737991_alignment_2
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	match_part	22928	23111	0.978	-	0	ID=GTH_SGN_E_tom_match_part_40;Target=SGN-E737991 673 856 +;Parent=SGN-E737991_alignment_2
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	match	24378	26078	0.958	-	0	ID=SGN-E740164_alignment_2;Target=SGN-E740164 1 621 +
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	match_part	25846	26078	0.957	-	0	ID=GTH_SGN_E_tom_match_part_41;Target=SGN-E740164 1 234 +;Parent=SGN-E740164_alignment_2
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	match_part	25082	25186	0.971	-	0	ID=GTH_SGN_E_tom_match_part_42;Target=SGN-E740164 235 339 +;Parent=SGN-E740164_alignment_2
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	match_part	24839	24981	0.958	-	0	ID=GTH_SGN_E_tom_match_part_43;Target=SGN-E740164 340 482 +;Parent=SGN-E740164_alignment_2
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	match_part	24660	24756	0.948	-	0	ID=GTH_SGN_E_tom_match_part_44;Target=SGN-E740164 483 579 +;Parent=SGN-E740164_alignment_2
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	match_part	24378	24419	1.000	-	0	ID=GTH_SGN_E_tom_match_part_45;Target=SGN-E740164 580 621 +;Parent=SGN-E740164_alignment_2
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	match	29985	30953	0.985	+	0	ID=SGN-E324859_alignment_2;Target=SGN-E324859 1 455 +
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	match_part	29985	30143	0.981	+	0	ID=GTH_SGN_E_tom_match_part_46;Target=SGN-E324859 1 159 +;Parent=SGN-E324859_alignment_2
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	match_part	30658	30953	0.986	+	0	ID=GTH_SGN_E_tom_match_part_47;Target=SGN-E324859 160 455 +;Parent=SGN-E324859_alignment_2
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	match	30047	31304	0.966	+	0	ID=SGN-E389520_alignment_2;Target=SGN-E389520 1 743 +
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	match_part	30047	30143	0.918	+	0	ID=GTH_SGN_E_tom_match_part_48;Target=SGN-E389520 1 96 +;Parent=SGN-E389520_alignment_2
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	match_part	30658	31304	0.974	+	0	ID=GTH_SGN_E_tom_match_part_49;Target=SGN-E389520 97 743 +;Parent=SGN-E389520_alignment_2
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	match	30055	31200	1.000	+	0	ID=SGN-E550171_alignment_2;Target=SGN-E550171 1 632 +
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	match_part	30055	30143	1.000	+	0	ID=GTH_SGN_E_tom_match_part_50;Target=SGN-E550171 1 89 +;Parent=SGN-E550171_alignment_2
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	match_part	30658	31200	1.000	+	0	ID=GTH_SGN_E_tom_match_part_51;Target=SGN-E550171 90 632 +;Parent=SGN-E550171_alignment_2
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	match	30056	31168	0.998	+	0	ID=SGN-E244669_alignment_2;Target=SGN-E244669 1 599 +
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	match_part	30056	30143	1.000	+	0	ID=GTH_SGN_E_tom_match_part_52;Target=SGN-E244669 1 88 +;Parent=SGN-E244669_alignment_2
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	match_part	30658	31168	0.998	+	0	ID=GTH_SGN_E_tom_match_part_53;Target=SGN-E244669 89 599 +;Parent=SGN-E244669_alignment_2
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	match	30056	31079	0.994	+	0	ID=SGN-E226955_alignment_2;Target=SGN-E226955 1 510 +
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	match_part	30056	30143	0.977	+	0	ID=GTH_SGN_E_tom_match_part_54;Target=SGN-E226955 1 88 +;Parent=SGN-E226955_alignment_2
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	match_part	30658	31079	0.998	+	0	ID=GTH_SGN_E_tom_match_part_55;Target=SGN-E226955 89 510 +;Parent=SGN-E226955_alignment_2
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	match	30056	31079	1.000	+	0	ID=SGN-E241423_alignment_2;Target=SGN-E241423 1 510 +
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	match_part	30056	30143	1.000	+	0	ID=GTH_SGN_E_tom_match_part_56;Target=SGN-E241423 1 88 +;Parent=SGN-E241423_alignment_2
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	match_part	30658	31079	1.000	+	0	ID=GTH_SGN_E_tom_match_part_57;Target=SGN-E241423 89 510 +;Parent=SGN-E241423_alignment_2
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	match	30546	31078	1.000	+	0	ID=SGN-E241675_alignment_2;Target=SGN-E241675 1 533 +
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	match_part	30546	31078	1.000	+	0	ID=GTH_SGN_E_tom_match_part_58;Target=SGN-E241675 1 533 +;Parent=SGN-E241675_alignment_2
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	match	30662	31361	1.000	+	0	ID=SGN-E377414_alignment_2;Target=SGN-E377414 1 700 +
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	match_part	30662	31361	1.000	+	0	ID=GTH_SGN_E_tom_match_part_59;Target=SGN-E377414 1 700 +;Parent=SGN-E377414_alignment_2
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	match	30662	31313	1.000	+	0	ID=SGN-E238385_alignment_2;Target=SGN-E238385 1 652 +
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	match_part	30662	31313	1.000	+	0	ID=GTH_SGN_E_tom_match_part_60;Target=SGN-E238385 1 652 +;Parent=SGN-E238385_alignment_2
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	match	30662	31248	1.000	+	0	ID=SGN-E236435_alignment_2;Target=SGN-E236435 1 587 +
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	match_part	30662	31248	1.000	+	0	ID=GTH_SGN_E_tom_match_part_61;Target=SGN-E236435 1 587 +;Parent=SGN-E236435_alignment_2
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	match	30662	31190	1.000	+	0	ID=SGN-E241797_alignment_2;Target=SGN-E241797 1 529 +
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	match_part	30662	31190	1.000	+	0	ID=GTH_SGN_E_tom_match_part_62;Target=SGN-E241797 1 529 +;Parent=SGN-E241797_alignment_2
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	match	30662	30907	0.992	+	0	ID=SGN-E240001_alignment_2;Target=SGN-E240001 1 247 +
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	match_part	30662	30907	0.992	+	0	ID=GTH_SGN_E_tom_match_part_63;Target=SGN-E240001 1 247 +;Parent=SGN-E240001_alignment_2
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	match	30688	30902	0.930	+	0	ID=SGN-E239864_alignment_2;Target=SGN-E239864 1 216 +
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	match_part	30688	30902	0.930	+	0	ID=GTH_SGN_E_tom_match_part_64;Target=SGN-E239864 1 216 +;Parent=SGN-E239864_alignment_2
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	match	30879	31534	0.995	+	0	ID=SGN-E377413_alignment_2;Target=SGN-E377413 1 656 +
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	match_part	30879	31534	0.995	+	0	ID=GTH_SGN_E_tom_match_part_65;Target=SGN-E377413 1 656 +;Parent=SGN-E377413_alignment_2
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	match	30882	31602	1.000	+	0	ID=SGN-E550421_alignment_2;Target=SGN-E550421 1 721 +
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	match_part	30882	31602	1.000	+	0	ID=GTH_SGN_E_tom_match_part_66;Target=SGN-E550421 1 721 +;Parent=SGN-E550421_alignment_2
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	match	31012	31630	0.997	+	0	ID=SGN-E389521_alignment_2;Target=SGN-E389521 1 618 +
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	match_part	31012	31630	0.997	+	0	ID=GTH_SGN_E_tom_match_part_67;Target=SGN-E389521 1 618 +;Parent=SGN-E389521_alignment_2
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	gene	4008	4518	.	-	0	ID=GTH_SGN_E_tom_gene_1
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	mRNA	4008	4518	.	-	0	ID=GTH_SGN_E_tom_gene_1_AGS_1;Parent=GTH_SGN_E_tom_gene_1
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	exon	4008	4518	0.992	-	0	ID=GTH_SGN_E_tom_exon_1;Parent=GTH_SGN_E_tom_gene_1_AGS_1
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	gene	8062	8606	.	-	0	ID=GTH_SGN_E_tom_gene_2
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	mRNA	8062	8606	.	-	0	ID=GTH_SGN_E_tom_gene_2_AGS_1;Parent=GTH_SGN_E_tom_gene_2
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	exon	8062	8606	0.983	-	0	ID=GTH_SGN_E_tom_exon_2;Parent=GTH_SGN_E_tom_gene_2_AGS_1
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	gene	19376	21512	.	-	0	ID=GTH_SGN_E_tom_gene_3
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	mRNA	19376	21512	.	-	0	ID=GTH_SGN_E_tom_gene_3_AGS_1;Parent=GTH_SGN_E_tom_gene_3
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	exon	21478	21512	0.943	-	0	ID=GTH_SGN_E_tom_exon_3;Parent=GTH_SGN_E_tom_gene_3_AGS_1
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	exon	20858	21034	1.000	-	0	ID=GTH_SGN_E_tom_exon_4;Parent=GTH_SGN_E_tom_gene_3_AGS_1
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	exon	20652	20771	1.000	-	0	ID=GTH_SGN_E_tom_exon_5;Parent=GTH_SGN_E_tom_gene_3_AGS_1
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	exon	20428	20566	1.000	-	0	ID=GTH_SGN_E_tom_exon_6;Parent=GTH_SGN_E_tom_gene_3_AGS_1
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	exon	20187	20299	1.000	-	0	ID=GTH_SGN_E_tom_exon_7;Parent=GTH_SGN_E_tom_gene_3_AGS_1
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	exon	19920	20035	1.000	-	0	ID=GTH_SGN_E_tom_exon_8;Parent=GTH_SGN_E_tom_gene_3_AGS_1
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	exon	19453	19845	0.997	-	0	ID=GTH_SGN_E_tom_exon_9;Parent=GTH_SGN_E_tom_gene_3_AGS_1
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	exon	19376	19388	0.692	-	0	ID=GTH_SGN_E_tom_exon_10;Parent=GTH_SGN_E_tom_gene_3_AGS_1
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	gene	22928	26078	.	-	0	ID=GTH_SGN_E_tom_gene_4
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	mRNA	22928	26078	.	-	0	ID=GTH_SGN_E_tom_gene_4_AGS_1;Parent=GTH_SGN_E_tom_gene_4
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	exon	25846	26078	0.957	-	0	ID=GTH_SGN_E_tom_exon_11;Parent=GTH_SGN_E_tom_gene_4_AGS_1
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	exon	25082	25186	0.971	-	0	ID=GTH_SGN_E_tom_exon_12;Parent=GTH_SGN_E_tom_gene_4_AGS_1
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	exon	24839	24981	0.958	-	0	ID=GTH_SGN_E_tom_exon_13;Parent=GTH_SGN_E_tom_gene_4_AGS_1
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	exon	24660	24756	1.000	-	0	ID=GTH_SGN_E_tom_exon_14;Parent=GTH_SGN_E_tom_gene_4_AGS_1
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	exon	24373	24419	1.000	-	0	ID=GTH_SGN_E_tom_exon_15;Parent=GTH_SGN_E_tom_gene_4_AGS_1
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	exon	24055	24253	1.000	-	0	ID=GTH_SGN_E_tom_exon_16;Parent=GTH_SGN_E_tom_gene_4_AGS_1
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	exon	23485	23551	1.000	-	0	ID=GTH_SGN_E_tom_exon_17;Parent=GTH_SGN_E_tom_gene_4_AGS_1
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	exon	23185	23361	0.994	-	0	ID=GTH_SGN_E_tom_exon_18;Parent=GTH_SGN_E_tom_gene_4_AGS_1
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	exon	22928	23111	0.978	-	0	ID=GTH_SGN_E_tom_exon_19;Parent=GTH_SGN_E_tom_gene_4_AGS_1
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	gene	29985	31630	.	+	0	ID=GTH_SGN_E_tom_gene_5
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	mRNA	29985	31630	.	+	0	ID=GTH_SGN_E_tom_gene_5_AGS_1;Parent=GTH_SGN_E_tom_gene_5
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	exon	29985	30143	0.981	+	0	ID=GTH_SGN_E_tom_exon_20;Parent=GTH_SGN_E_tom_gene_5_AGS_1
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	exon	30658	31630	1.000	+	0	ID=GTH_SGN_E_tom_exon_21;Parent=GTH_SGN_E_tom_gene_5_AGS_1
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	mRNA	30546	31630	.	+	0	ID=GTH_SGN_E_tom_gene_5_AGS_2;Parent=GTH_SGN_E_tom_gene_5
C09SLf0089D12.1	GenomeThreader_SGN_E_tomato	exon	30546	31630	1.000	+	0	ID=GTH_SGN_E_tom_exon_22;Parent=GTH_SGN_E_tom_gene_5_AGS_2
C09SLf0089D12.1	AUGUSTUS_tom_cdna	gene	19692	25935	1	-	.	ID=g1_1
C09SLf0089D12.1	AUGUSTUS_tom_cdna	transcript	19692	25935	.	-	.	ID=g1.t1_1;Parent=g1_1
C09SLf0089D12.1	AUGUSTUS_tom_cdna	stop_codon	19692	19694	.	-	0	Parent=g1.t1_1
C09SLf0089D12.1	AUGUSTUS_tom_cdna	CDS	19692	19845	.	-	1	ID=g1.t1.cds_1;Parent=g1.t1_1
C09SLf0089D12.1	AUGUSTUS_tom_cdna	CDS	19920	20035	.	-	0	ID=g1.t1.cds_2;Parent=g1.t1_1
C09SLf0089D12.1	AUGUSTUS_tom_cdna	CDS	20187	20299	.	-	2	ID=g1.t1.cds_3;Parent=g1.t1_1
C09SLf0089D12.1	AUGUSTUS_tom_cdna	CDS	20428	20566	.	-	0	ID=g1.t1.cds_4;Parent=g1.t1_1
C09SLf0089D12.1	AUGUSTUS_tom_cdna	CDS	20652	20771	.	-	0	ID=g1.t1.cds_5;Parent=g1.t1_1
C09SLf0089D12.1	AUGUSTUS_tom_cdna	CDS	20858	21034	.	-	0	ID=g1.t1.cds_6;Parent=g1.t1_1
C09SLf0089D12.1	AUGUSTUS_tom_cdna	CDS	21478	21550	.	-	1	ID=g1.t1.cds_7;Parent=g1.t1_1
C09SLf0089D12.1	AUGUSTUS_tom_cdna	CDS	21650	21809	.	-	2	ID=g1.t1.cds_8;Parent=g1.t1_1
C09SLf0089D12.1	AUGUSTUS_tom_cdna	CDS	21939	22824	.	-	0	ID=g1.t1.cds_9;Parent=g1.t1_1
C09SLf0089D12.1	AUGUSTUS_tom_cdna	CDS	22918	23111	.	-	2	ID=g1.t1.cds_10;Parent=g1.t1_1
C09SLf0089D12.1	AUGUSTUS_tom_cdna	CDS	23185	23361	.	-	2	ID=g1.t1.cds_11;Parent=g1.t1_1
C09SLf0089D12.1	AUGUSTUS_tom_cdna	CDS	23485	23551	.	-	0	ID=g1.t1.cds_12;Parent=g1.t1_1
C09SLf0089D12.1	AUGUSTUS_tom_cdna	CDS	24055	24253	.	-	1	ID=g1.t1.cds_13;Parent=g1.t1_1
C09SLf0089D12.1	AUGUSTUS_tom_cdna	CDS	24373	24419	.	-	0	ID=g1.t1.cds_14;Parent=g1.t1_1
C09SLf0089D12.1	AUGUSTUS_tom_cdna	CDS	24660	24756	.	-	1	ID=g1.t1.cds_15;Parent=g1.t1_1
C09SLf0089D12.1	AUGUSTUS_tom_cdna	CDS	24839	24981	.	-	0	ID=g1.t1.cds_16;Parent=g1.t1_1
C09SLf0089D12.1	AUGUSTUS_tom_cdna	CDS	25082	25186	.	-	0	ID=g1.t1.cds_17;Parent=g1.t1_1
C09SLf0089D12.1	AUGUSTUS_tom_cdna	CDS	25846	25935	.	-	0	ID=g1.t1.cds_18;Parent=g1.t1_1
C09SLf0089D12.1	AUGUSTUS_tom_cdna	start_codon	25933	25935	.	-	0	Parent=g1.t1_1
C09SLf0089D12.1	AUGUSTUS_tom_cdna	gene	29762	31284	1	+	.	ID=g2_1
C09SLf0089D12.1	AUGUSTUS_tom_cdna	transcript	29762	31284	.	+	.	ID=g2.t1_1;Parent=g2_1
C09SLf0089D12.1	AUGUSTUS_tom_cdna	start_codon	29762	29764	.	+	0	Parent=g2.t1_1
C09SLf0089D12.1	AUGUSTUS_tom_cdna	CDS	29762	29884	.	+	0	ID=g2.t1.cds_1;Parent=g2.t1_1
C09SLf0089D12.1	AUGUSTUS_tom_cdna	CDS	30105	30143	.	+	0	ID=g2.t1.cds_2;Parent=g2.t1_1
C09SLf0089D12.1	AUGUSTUS_tom_cdna	CDS	30658	31284	.	+	0	ID=g2.t1.cds_3;Parent=g2.t1_1
C09SLf0089D12.1	AUGUSTUS_tom_cdna	stop_codon	31282	31284	.	+	0	Parent=g2.t1_1
C09SLf0089D12.1	AUGUSTUS_ab_initio	gene	19692	25935	1	-	.	ID=g1_2
C09SLf0089D12.1	AUGUSTUS_ab_initio	transcript	19692	25935	.	-	.	ID=g1.t1_2;Parent=g1_2
C09SLf0089D12.1	AUGUSTUS_ab_initio	stop_codon	19692	19694	.	-	0	Parent=g1.t1_2
C09SLf0089D12.1	AUGUSTUS_ab_initio	CDS	19692	19845	.	-	1	ID=g1.t1.cds_19;Parent=g1.t1_2
C09SLf0089D12.1	AUGUSTUS_ab_initio	CDS	19920	20035	.	-	0	ID=g1.t1.cds_20;Parent=g1.t1_2
C09SLf0089D12.1	AUGUSTUS_ab_initio	CDS	20187	20299	.	-	2	ID=g1.t1.cds_21;Parent=g1.t1_2
C09SLf0089D12.1	AUGUSTUS_ab_initio	CDS	20428	20566	.	-	0	ID=g1.t1.cds_22;Parent=g1.t1_2
C09SLf0089D12.1	AUGUSTUS_ab_initio	CDS	20652	20771	.	-	0	ID=g1.t1.cds_23;Parent=g1.t1_2
C09SLf0089D12.1	AUGUSTUS_ab_initio	CDS	20858	21034	.	-	0	ID=g1.t1.cds_24;Parent=g1.t1_2
C09SLf0089D12.1	AUGUSTUS_ab_initio	CDS	21478	21550	.	-	1	ID=g1.t1.cds_25;Parent=g1.t1_2
C09SLf0089D12.1	AUGUSTUS_ab_initio	CDS	21650	21809	.	-	2	ID=g1.t1.cds_26;Parent=g1.t1_2
C09SLf0089D12.1	AUGUSTUS_ab_initio	CDS	23185	23356	.	-	0	ID=g1.t1.cds_27;Parent=g1.t1_2
C09SLf0089D12.1	AUGUSTUS_ab_initio	CDS	24660	24756	.	-	1	ID=g1.t1.cds_28;Parent=g1.t1_2
C09SLf0089D12.1	AUGUSTUS_ab_initio	CDS	24839	24981	.	-	0	ID=g1.t1.cds_29;Parent=g1.t1_2
C09SLf0089D12.1	AUGUSTUS_ab_initio	CDS	25082	25186	.	-	0	ID=g1.t1.cds_30;Parent=g1.t1_2
C09SLf0089D12.1	AUGUSTUS_ab_initio	CDS	25846	25935	.	-	0	ID=g1.t1.cds_31;Parent=g1.t1_2
C09SLf0089D12.1	AUGUSTUS_ab_initio	start_codon	25933	25935	.	-	0	Parent=g1.t1_2
C09SLf0089D12.1	AUGUSTUS_ab_initio	gene	30673	31284	1	+	.	ID=g2_2
C09SLf0089D12.1	AUGUSTUS_ab_initio	transcript	30673	31284	.	+	.	ID=g2.t1_2;Parent=g2_2
C09SLf0089D12.1	AUGUSTUS_ab_initio	start_codon	30673	30675	.	+	0	Parent=g2.t1_2
C09SLf0089D12.1	AUGUSTUS_ab_initio	CDS	30673	31284	.	+	0	ID=g2.t1.cds_4;Parent=g2.t1_2
C09SLf0089D12.1	AUGUSTUS_ab_initio	stop_codon	31282	31284	.	+	0	Parent=g2.t1_2
C09SLf0089D12.1	AUGUSTUS_tom_ugs	gene	19692	25935	1	-	.	ID=g1_3
C09SLf0089D12.1	AUGUSTUS_tom_ugs	transcript	19692	25935	.	-	.	ID=g1.t1_3;Parent=g1_3
C09SLf0089D12.1	AUGUSTUS_tom_ugs	stop_codon	19692	19694	.	-	0	Parent=g1.t1_3
C09SLf0089D12.1	AUGUSTUS_tom_ugs	CDS	19692	19845	.	-	1	ID=g1.t1.cds_32;Parent=g1.t1_3
C09SLf0089D12.1	AUGUSTUS_tom_ugs	CDS	19920	20035	.	-	0	ID=g1.t1.cds_33;Parent=g1.t1_3
C09SLf0089D12.1	AUGUSTUS_tom_ugs	CDS	20187	20299	.	-	2	ID=g1.t1.cds_34;Parent=g1.t1_3
C09SLf0089D12.1	AUGUSTUS_tom_ugs	CDS	20428	20566	.	-	0	ID=g1.t1.cds_35;Parent=g1.t1_3
C09SLf0089D12.1	AUGUSTUS_tom_ugs	CDS	20652	20771	.	-	0	ID=g1.t1.cds_36;Parent=g1.t1_3
C09SLf0089D12.1	AUGUSTUS_tom_ugs	CDS	20858	21034	.	-	0	ID=g1.t1.cds_37;Parent=g1.t1_3
C09SLf0089D12.1	AUGUSTUS_tom_ugs	CDS	21478	21550	.	-	1	ID=g1.t1.cds_38;Parent=g1.t1_3
C09SLf0089D12.1	AUGUSTUS_tom_ugs	CDS	21650	21809	.	-	2	ID=g1.t1.cds_39;Parent=g1.t1_3
C09SLf0089D12.1	AUGUSTUS_tom_ugs	CDS	21939	22824	.	-	0	ID=g1.t1.cds_40;Parent=g1.t1_3
C09SLf0089D12.1	AUGUSTUS_tom_ugs	CDS	22918	23111	.	-	2	ID=g1.t1.cds_41;Parent=g1.t1_3
C09SLf0089D12.1	AUGUSTUS_tom_ugs	CDS	23185	23361	.	-	2	ID=g1.t1.cds_42;Parent=g1.t1_3
C09SLf0089D12.1	AUGUSTUS_tom_ugs	CDS	23485	23551	.	-	0	ID=g1.t1.cds_43;Parent=g1.t1_3
C09SLf0089D12.1	AUGUSTUS_tom_ugs	CDS	24055	24253	.	-	1	ID=g1.t1.cds_44;Parent=g1.t1_3
C09SLf0089D12.1	AUGUSTUS_tom_ugs	CDS	24373	24419	.	-	0	ID=g1.t1.cds_45;Parent=g1.t1_3
C09SLf0089D12.1	AUGUSTUS_tom_ugs	CDS	24660	24756	.	-	1	ID=g1.t1.cds_46;Parent=g1.t1_3
C09SLf0089D12.1	AUGUSTUS_tom_ugs	CDS	24839	24981	.	-	0	ID=g1.t1.cds_47;Parent=g1.t1_3
C09SLf0089D12.1	AUGUSTUS_tom_ugs	CDS	25082	25186	.	-	0	ID=g1.t1.cds_48;Parent=g1.t1_3
C09SLf0089D12.1	AUGUSTUS_tom_ugs	CDS	25846	25935	.	-	0	ID=g1.t1.cds_49;Parent=g1.t1_3
C09SLf0089D12.1	AUGUSTUS_tom_ugs	start_codon	25933	25935	.	-	0	Parent=g1.t1_3
C09SLf0089D12.1	AUGUSTUS_tom_ugs	gene	30646	31284	1	+	.	ID=g2_3
C09SLf0089D12.1	AUGUSTUS_tom_ugs	transcript	30646	31284	.	+	.	ID=g2.t1_3;Parent=g2_3
C09SLf0089D12.1	AUGUSTUS_tom_ugs	start_codon	30646	30648	.	+	0	Parent=g2.t1_3
C09SLf0089D12.1	AUGUSTUS_tom_ugs	CDS	30646	31284	.	+	0	ID=g2.t1.cds_5;Parent=g2.t1_3
C09SLf0089D12.1	AUGUSTUS_tom_ugs	stop_codon	31282	31284	.	+	0	Parent=g2.t1_3
C09SLf0089D12.1	GenomeThreader_SGN_U_tomato	match	4008	4518	0.992	-	0	ID=SGN-U340296_alignment_1;Target=SGN-U340296 1 511 +
C09SLf0089D12.1	GenomeThreader_SGN_U_tomato	match_part	4008	4518	0.992	-	0	ID=GTH_SGN_U_tom_match_part_1;Target=SGN-U340296 1 511 +;Parent=SGN-U340296_alignment_1
C09SLf0089D12.1	GenomeThreader_SGN_U_tomato	match	8062	8606	0.983	-	0	ID=SGN-U345335_alignment_1;Target=SGN-U345335 1 544 +
C09SLf0089D12.1	GenomeThreader_SGN_U_tomato	match_part	8062	8606	0.983	-	0	ID=GTH_SGN_U_tom_match_part_2;Target=SGN-U345335 1 544 +;Parent=SGN-U345335_alignment_1
C09SLf0089D12.1	GenomeThreader_SGN_U_tomato	match	19376	21511	0.999	-	0	ID=SGN-U322585_alignment_1;Target=SGN-U322585 1 1105 +
C09SLf0089D12.1	GenomeThreader_SGN_U_tomato	match_part	21478	21511	0.971	-	0	ID=GTH_SGN_U_tom_match_part_3;Target=SGN-U322585 1 34 +;Parent=SGN-U322585_alignment_1
C09SLf0089D12.1	GenomeThreader_SGN_U_tomato	match_part	20858	21034	1.000	-	0	ID=GTH_SGN_U_tom_match_part_4;Target=SGN-U322585 35 211 +;Parent=SGN-U322585_alignment_1
C09SLf0089D12.1	GenomeThreader_SGN_U_tomato	match_part	20652	20771	1.000	-	0	ID=GTH_SGN_U_tom_match_part_5;Target=SGN-U322585 212 331 +;Parent=SGN-U322585_alignment_1
C09SLf0089D12.1	GenomeThreader_SGN_U_tomato	match_part	20428	20566	1.000	-	0	ID=GTH_SGN_U_tom_match_part_6;Target=SGN-U322585 332 470 +;Parent=SGN-U322585_alignment_1
C09SLf0089D12.1	GenomeThreader_SGN_U_tomato	match_part	20187	20299	1.000	-	0	ID=GTH_SGN_U_tom_match_part_7;Target=SGN-U322585 471 583 +;Parent=SGN-U322585_alignment_1
C09SLf0089D12.1	GenomeThreader_SGN_U_tomato	match_part	19920	20035	1.000	-	0	ID=GTH_SGN_U_tom_match_part_8;Target=SGN-U322585 584 699 +;Parent=SGN-U322585_alignment_1
C09SLf0089D12.1	GenomeThreader_SGN_U_tomato	match_part	19453	19845	0.997	-	0	ID=GTH_SGN_U_tom_match_part_9;Target=SGN-U322585 700 1092 +;Parent=SGN-U322585_alignment_1
C09SLf0089D12.1	GenomeThreader_SGN_U_tomato	match_part	19376	19388	0.692	-	0	ID=GTH_SGN_U_tom_match_part_10;Target=SGN-U322585 1093 1105 +;Parent=SGN-U322585_alignment_1
C09SLf0089D12.1	GenomeThreader_SGN_U_tomato	match	22928	26062	0.985	-	0	ID=SGN-U330582_alignment_1;Target=SGN-U330582 1 1237 +
C09SLf0089D12.1	GenomeThreader_SGN_U_tomato	match_part	25846	26062	0.968	-	0	ID=GTH_SGN_U_tom_match_part_11;Target=SGN-U330582 1 218 +;Parent=SGN-U330582_alignment_1
C09SLf0089D12.1	GenomeThreader_SGN_U_tomato	match_part	25082	25186	0.971	-	0	ID=GTH_SGN_U_tom_match_part_12;Target=SGN-U330582 219 323 +;Parent=SGN-U330582_alignment_1
C09SLf0089D12.1	GenomeThreader_SGN_U_tomato	match_part	24839	24981	0.979	-	0	ID=GTH_SGN_U_tom_match_part_13;Target=SGN-U330582 324 466 +;Parent=SGN-U330582_alignment_1
C09SLf0089D12.1	GenomeThreader_SGN_U_tomato	match_part	24660	24756	1.000	-	0	ID=GTH_SGN_U_tom_match_part_14;Target=SGN-U330582 467 563 +;Parent=SGN-U330582_alignment_1
C09SLf0089D12.1	GenomeThreader_SGN_U_tomato	match_part	24373	24419	1.000	-	0	ID=GTH_SGN_U_tom_match_part_15;Target=SGN-U330582 564 610 +;Parent=SGN-U330582_alignment_1
C09SLf0089D12.1	GenomeThreader_SGN_U_tomato	match_part	24055	24253	1.000	-	0	ID=GTH_SGN_U_tom_match_part_16;Target=SGN-U330582 611 809 +;Parent=SGN-U330582_alignment_1
C09SLf0089D12.1	GenomeThreader_SGN_U_tomato	match_part	23485	23551	1.000	-	0	ID=GTH_SGN_U_tom_match_part_17;Target=SGN-U330582 810 876 +;Parent=SGN-U330582_alignment_1
C09SLf0089D12.1	GenomeThreader_SGN_U_tomato	match_part	23185	23361	0.994	-	0	ID=GTH_SGN_U_tom_match_part_18;Target=SGN-U330582 877 1053 +;Parent=SGN-U330582_alignment_1
C09SLf0089D12.1	GenomeThreader_SGN_U_tomato	match_part	22928	23111	0.978	-	0	ID=GTH_SGN_U_tom_match_part_19;Target=SGN-U330582 1054 1237 +;Parent=SGN-U330582_alignment_1
C09SLf0089D12.1	GenomeThreader_SGN_U_tomato	match	29985	31630	0.996	+	0	ID=SGN-U318571_alignment_1;Target=SGN-U318571 1 1131 +
C09SLf0089D12.1	GenomeThreader_SGN_U_tomato	match_part	29985	30143	0.981	+	0	ID=GTH_SGN_U_tom_match_part_20;Target=SGN-U318571 1 159 +;Parent=SGN-U318571_alignment_1
C09SLf0089D12.1	GenomeThreader_SGN_U_tomato	match_part	30658	31630	0.998	+	0	ID=GTH_SGN_U_tom_match_part_21;Target=SGN-U318571 160 1131 +;Parent=SGN-U318571_alignment_1
C09SLf0089D12.1	GenomeThreader_SGN_U_tomato	match	30688	30902	0.930	+	0	ID=SGN-U336562_alignment_1;Target=SGN-U336562 1 216 +
C09SLf0089D12.1	GenomeThreader_SGN_U_tomato	match_part	30688	30902	0.930	+	0	ID=GTH_SGN_U_tom_match_part_22;Target=SGN-U336562 1 216 +;Parent=SGN-U336562_alignment_1
C09SLf0089D12.1	GenomeThreader_SGN_U_tomato	gene	4008	4518	.	-	0	ID=GTH_SGN_U_tom_gene_1
C09SLf0089D12.1	GenomeThreader_SGN_U_tomato	mRNA	4008	4518	.	-	0	ID=GTH_SGN_U_tom_gene_1_AGS_1;Parent=GTH_SGN_U_tom_gene_1
C09SLf0089D12.1	GenomeThreader_SGN_U_tomato	exon	4008	4518	0.992	-	0	ID=GTH_SGN_U_tom_exon_1;Parent=GTH_SGN_U_tom_gene_1_AGS_1
C09SLf0089D12.1	GenomeThreader_SGN_U_tomato	gene	8062	8606	.	-	0	ID=GTH_SGN_U_tom_gene_2
C09SLf0089D12.1	GenomeThreader_SGN_U_tomato	mRNA	8062	8606	.	-	0	ID=GTH_SGN_U_tom_gene_2_AGS_1;Parent=GTH_SGN_U_tom_gene_2
C09SLf0089D12.1	GenomeThreader_SGN_U_tomato	exon	8062	8606	0.983	-	0	ID=GTH_SGN_U_tom_exon_2;Parent=GTH_SGN_U_tom_gene_2_AGS_1
C09SLf0089D12.1	GenomeThreader_SGN_U_tomato	gene	19376	21511	.	-	0	ID=GTH_SGN_U_tom_gene_3
C09SLf0089D12.1	GenomeThreader_SGN_U_tomato	mRNA	19376	21511	.	-	0	ID=GTH_SGN_U_tom_gene_3_AGS_1;Parent=GTH_SGN_U_tom_gene_3
C09SLf0089D12.1	GenomeThreader_SGN_U_tomato	exon	21478	21511	0.971	-	0	ID=GTH_SGN_U_tom_exon_3;Parent=GTH_SGN_U_tom_gene_3_AGS_1
C09SLf0089D12.1	GenomeThreader_SGN_U_tomato	exon	20858	21034	1.000	-	0	ID=GTH_SGN_U_tom_exon_4;Parent=GTH_SGN_U_tom_gene_3_AGS_1
C09SLf0089D12.1	GenomeThreader_SGN_U_tomato	exon	20652	20771	1.000	-	0	ID=GTH_SGN_U_tom_exon_5;Parent=GTH_SGN_U_tom_gene_3_AGS_1
C09SLf0089D12.1	GenomeThreader_SGN_U_tomato	exon	20428	20566	1.000	-	0	ID=GTH_SGN_U_tom_exon_6;Parent=GTH_SGN_U_tom_gene_3_AGS_1
C09SLf0089D12.1	GenomeThreader_SGN_U_tomato	exon	20187	20299	1.000	-	0	ID=GTH_SGN_U_tom_exon_7;Parent=GTH_SGN_U_tom_gene_3_AGS_1
C09SLf0089D12.1	GenomeThreader_SGN_U_tomato	exon	19920	20035	1.000	-	0	ID=GTH_SGN_U_tom_exon_8;Parent=GTH_SGN_U_tom_gene_3_AGS_1
C09SLf0089D12.1	GenomeThreader_SGN_U_tomato	exon	19453	19845	0.997	-	0	ID=GTH_SGN_U_tom_exon_9;Parent=GTH_SGN_U_tom_gene_3_AGS_1
C09SLf0089D12.1	GenomeThreader_SGN_U_tomato	exon	19376	19388	0.692	-	0	ID=GTH_SGN_U_tom_exon_10;Parent=GTH_SGN_U_tom_gene_3_AGS_1
C09SLf0089D12.1	GenomeThreader_SGN_U_tomato	gene	22928	26062	.	-	0	ID=GTH_SGN_U_tom_gene_4
C09SLf0089D12.1	GenomeThreader_SGN_U_tomato	mRNA	22928	26062	.	-	0	ID=GTH_SGN_U_tom_gene_4_AGS_1;Parent=GTH_SGN_U_tom_gene_4
C09SLf0089D12.1	GenomeThreader_SGN_U_tomato	exon	25846	26062	0.968	-	0	ID=GTH_SGN_U_tom_exon_11;Parent=GTH_SGN_U_tom_gene_4_AGS_1
C09SLf0089D12.1	GenomeThreader_SGN_U_tomato	exon	25082	25186	0.971	-	0	ID=GTH_SGN_U_tom_exon_12;Parent=GTH_SGN_U_tom_gene_4_AGS_1
C09SLf0089D12.1	GenomeThreader_SGN_U_tomato	exon	24839	24981	0.979	-	0	ID=GTH_SGN_U_tom_exon_13;Parent=GTH_SGN_U_tom_gene_4_AGS_1
C09SLf0089D12.1	GenomeThreader_SGN_U_tomato	exon	24660	24756	1.000	-	0	ID=GTH_SGN_U_tom_exon_14;Parent=GTH_SGN_U_tom_gene_4_AGS_1
C09SLf0089D12.1	GenomeThreader_SGN_U_tomato	exon	24373	24419	1.000	-	0	ID=GTH_SGN_U_tom_exon_15;Parent=GTH_SGN_U_tom_gene_4_AGS_1
C09SLf0089D12.1	GenomeThreader_SGN_U_tomato	exon	24055	24253	1.000	-	0	ID=GTH_SGN_U_tom_exon_16;Parent=GTH_SGN_U_tom_gene_4_AGS_1
C09SLf0089D12.1	GenomeThreader_SGN_U_tomato	exon	23485	23551	1.000	-	0	ID=GTH_SGN_U_tom_exon_17;Parent=GTH_SGN_U_tom_gene_4_AGS_1
C09SLf0089D12.1	GenomeThreader_SGN_U_tomato	exon	23185	23361	0.994	-	0	ID=GTH_SGN_U_tom_exon_18;Parent=GTH_SGN_U_tom_gene_4_AGS_1
C09SLf0089D12.1	GenomeThreader_SGN_U_tomato	exon	22928	23111	0.978	-	0	ID=GTH_SGN_U_tom_exon_19;Parent=GTH_SGN_U_tom_gene_4_AGS_1
C09SLf0089D12.1	GenomeThreader_SGN_U_tomato	gene	29985	31630	.	+	0	ID=GTH_SGN_U_tom_gene_5
C09SLf0089D12.1	GenomeThreader_SGN_U_tomato	mRNA	29985	31630	.	+	0	ID=GTH_SGN_U_tom_gene_5_AGS_1;Parent=GTH_SGN_U_tom_gene_5
C09SLf0089D12.1	GenomeThreader_SGN_U_tomato	exon	29985	30143	0.981	+	0	ID=GTH_SGN_U_tom_exon_20;Parent=GTH_SGN_U_tom_gene_5_AGS_1
C09SLf0089D12.1	GenomeThreader_SGN_U_tomato	exon	30658	31630	0.998	+	0	ID=GTH_SGN_U_tom_exon_21;Parent=GTH_SGN_U_tom_gene_5_AGS_1
C09SLf0089D12.1	AUGUSTUS_tom_pot_cdna	gene	19692	25935	1	-	.	ID=g1_4
C09SLf0089D12.1	AUGUSTUS_tom_pot_cdna	transcript	19692	25935	.	-	.	ID=g1.t1_4;Parent=g1_4
C09SLf0089D12.1	AUGUSTUS_tom_pot_cdna	stop_codon	19692	19694	.	-	0	Parent=g1.t1_4
C09SLf0089D12.1	AUGUSTUS_tom_pot_cdna	CDS	19692	19845	.	-	1	ID=g1.t1.cds_50;Parent=g1.t1_4
C09SLf0089D12.1	AUGUSTUS_tom_pot_cdna	CDS	19920	20035	.	-	0	ID=g1.t1.cds_51;Parent=g1.t1_4
C09SLf0089D12.1	AUGUSTUS_tom_pot_cdna	CDS	20187	20299	.	-	2	ID=g1.t1.cds_52;Parent=g1.t1_4
C09SLf0089D12.1	AUGUSTUS_tom_pot_cdna	CDS	20428	20566	.	-	0	ID=g1.t1.cds_53;Parent=g1.t1_4
C09SLf0089D12.1	AUGUSTUS_tom_pot_cdna	CDS	20652	20771	.	-	0	ID=g1.t1.cds_54;Parent=g1.t1_4
C09SLf0089D12.1	AUGUSTUS_tom_pot_cdna	CDS	20858	21034	.	-	0	ID=g1.t1.cds_55;Parent=g1.t1_4
C09SLf0089D12.1	AUGUSTUS_tom_pot_cdna	CDS	21478	21550	.	-	1	ID=g1.t1.cds_56;Parent=g1.t1_4
C09SLf0089D12.1	AUGUSTUS_tom_pot_cdna	CDS	21650	21809	.	-	2	ID=g1.t1.cds_57;Parent=g1.t1_4
C09SLf0089D12.1	AUGUSTUS_tom_pot_cdna	CDS	21939	22824	.	-	0	ID=g1.t1.cds_58;Parent=g1.t1_4
C09SLf0089D12.1	AUGUSTUS_tom_pot_cdna	CDS	22918	23111	.	-	2	ID=g1.t1.cds_59;Parent=g1.t1_4
C09SLf0089D12.1	AUGUSTUS_tom_pot_cdna	CDS	23185	23361	.	-	2	ID=g1.t1.cds_60;Parent=g1.t1_4
C09SLf0089D12.1	AUGUSTUS_tom_pot_cdna	CDS	23485	23551	.	-	0	ID=g1.t1.cds_61;Parent=g1.t1_4
C09SLf0089D12.1	AUGUSTUS_tom_pot_cdna	CDS	24055	24253	.	-	1	ID=g1.t1.cds_62;Parent=g1.t1_4
C09SLf0089D12.1	AUGUSTUS_tom_pot_cdna	CDS	24373	24419	.	-	0	ID=g1.t1.cds_63;Parent=g1.t1_4
C09SLf0089D12.1	AUGUSTUS_tom_pot_cdna	CDS	24660	24756	.	-	1	ID=g1.t1.cds_64;Parent=g1.t1_4
C09SLf0089D12.1	AUGUSTUS_tom_pot_cdna	CDS	24839	24981	.	-	0	ID=g1.t1.cds_65;Parent=g1.t1_4
C09SLf0089D12.1	AUGUSTUS_tom_pot_cdna	CDS	25082	25186	.	-	0	ID=g1.t1.cds_66;Parent=g1.t1_4
C09SLf0089D12.1	AUGUSTUS_tom_pot_cdna	CDS	25846	25935	.	-	0	ID=g1.t1.cds_67;Parent=g1.t1_4
C09SLf0089D12.1	AUGUSTUS_tom_pot_cdna	start_codon	25933	25935	.	-	0	Parent=g1.t1_4
C09SLf0089D12.1	AUGUSTUS_tom_pot_cdna	gene	29762	31284	1	+	.	ID=g2_4
C09SLf0089D12.1	AUGUSTUS_tom_pot_cdna	transcript	29762	31284	.	+	.	ID=g2.t1_4;Parent=g2_4
C09SLf0089D12.1	AUGUSTUS_tom_pot_cdna	start_codon	29762	29764	.	+	0	Parent=g2.t1_4
C09SLf0089D12.1	AUGUSTUS_tom_pot_cdna	CDS	29762	29884	.	+	0	ID=g2.t1.cds_6;Parent=g2.t1_4
C09SLf0089D12.1	AUGUSTUS_tom_pot_cdna	CDS	30105	30143	.	+	0	ID=g2.t1.cds_7;Parent=g2.t1_4
C09SLf0089D12.1	AUGUSTUS_tom_pot_cdna	CDS	30658	31284	.	+	0	ID=g2.t1.cds_8;Parent=g2.t1_4
C09SLf0089D12.1	AUGUSTUS_tom_pot_cdna	stop_codon	31282	31284	.	+	0	Parent=g2.t1_4
C09SLf0089D12.1	BLAST_ath_pep	match	21256	23112	505	-	0	ID=AT3G12280.1_fwd_alignment_1;blast_gaps=11;Target=AT3G12280.1 306 811 +;blast_percent_identity=54.47;blast_mismatches=278;blast_evalue=6e-142
C09SLf0089D12.1	BLAST_ath_pep	match	20652	20792	69.3	-	0	ID=AT3G12280.1_fwd_alignment_2;blast_gaps=0;Target=AT3G12280.1 789 835 +;blast_percent_identity=65.96;blast_mismatches=16;blast_evalue=1e-35
C09SLf0089D12.1	BLAST_ath_pep	match	20852	21040	104	-	0	ID=AT3G12280.1_fwd_alignment_3;blast_gaps=0;Target=AT3G12280.1 735 797 +;blast_percent_identity=80.95;blast_mismatches=12;blast_evalue=1e-35
C09SLf0089D12.1	BLAST_ath_pep	match	30838	31281	137	+	0	ID=AT5G47920.1_fwd_alignment_1;blast_gaps=5;Target=AT5G47920.1 49 187 +;blast_percent_identity=50.96;blast_mismatches=68;blast_evalue=3e-31