##gff-version 3
##sequence-region C09SLf0140E16.1 1 24788
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	match	9298	10105	0.999	-	0	ID=SGN-E545182_alignment_1;Target=SGN-E545182 1 808 +
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	match_part	9298	10105	0.999	-	0	ID=GTH_SGN_E_tom_potato_match_part_1;Target=SGN-E545182 1 808 +;Parent=SGN-E545182_alignment_1
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	match	9326	10219	0.996	-	0	ID=SGN-E727209_alignment_1;Target=SGN-E727209 1 894 +
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	match_part	9326	10219	0.996	-	0	ID=GTH_SGN_E_tom_potato_match_part_2;Target=SGN-E727209 1 894 +;Parent=SGN-E727209_alignment_1
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	match	9392	10224	0.989	-	0	ID=SGN-E697720_alignment_1;Target=SGN-E697720 1 833 +
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	match_part	9392	10224	0.989	-	0	ID=GTH_SGN_E_tom_potato_match_part_3;Target=SGN-E697720 1 833 +;Parent=SGN-E697720_alignment_1
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	match	9447	10213	0.995	-	0	ID=SGN-E545183_alignment_1;Target=SGN-E545183 1 766 +
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	match_part	9447	10213	0.995	-	0	ID=GTH_SGN_E_tom_potato_match_part_4;Target=SGN-E545183 1 766 +;Parent=SGN-E545183_alignment_1
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	match	9527	10214	0.958	-	0	ID=SGN-E596463_alignment_1;Target=SGN-E596463 1 688 +
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	match_part	9527	10214	0.958	-	0	ID=GTH_SGN_E_tom_potato_match_part_5;Target=SGN-E596463 1 688 +;Parent=SGN-E596463_alignment_1
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	match	9830	10214	0.964	-	0	ID=SGN-E596794_alignment_1;Target=SGN-E596794 1 384 +
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	match_part	9830	10214	0.964	-	0	ID=GTH_SGN_E_tom_potato_match_part_6;Target=SGN-E596794 1 384 +;Parent=SGN-E596794_alignment_1
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	match	9830	10214	0.964	-	0	ID=SGN-E596886_alignment_1;Target=SGN-E596886 1 384 +
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	match_part	9830	10214	0.964	-	0	ID=GTH_SGN_E_tom_potato_match_part_7;Target=SGN-E596886 1 384 +;Parent=SGN-E596886_alignment_1
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	match	9886	10212	0.954	-	0	ID=SGN-E308334_alignment_1;Target=SGN-E308334 1 324 +
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	match_part	9886	10212	0.954	-	0	ID=GTH_SGN_E_tom_potato_match_part_8;Target=SGN-E308334 1 324 +;Parent=SGN-E308334_alignment_1
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	match	9934	10212	0.961	-	0	ID=SGN-E308333_alignment_1;Target=SGN-E308333 1 280 +
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	match_part	9934	10212	0.961	-	0	ID=GTH_SGN_E_tom_potato_match_part_9;Target=SGN-E308333 1 280 +;Parent=SGN-E308333_alignment_1
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	match	15122	17785	0.972	+	0	ID=SGN-E411314_alignment_1;Target=SGN-E411314 39 538 +
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	match_part	15122	15229	0.972	+	0	ID=GTH_SGN_E_tom_potato_match_part_10;Target=SGN-E411314 39 146 +;Parent=SGN-E411314_alignment_1
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	match_part	15336	15473	0.986	+	0	ID=GTH_SGN_E_tom_potato_match_part_11;Target=SGN-E411314 147 284 +;Parent=SGN-E411314_alignment_1
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	match_part	17152	17288	0.949	+	0	ID=GTH_SGN_E_tom_potato_match_part_12;Target=SGN-E411314 285 420 +;Parent=SGN-E411314_alignment_1
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	match_part	17668	17785	0.983	+	0	ID=GTH_SGN_E_tom_potato_match_part_13;Target=SGN-E411314 421 538 +;Parent=SGN-E411314_alignment_1
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	match	15133	17288	0.992	+	0	ID=SGN-E246916_alignment_1;Target=SGN-E246916 1 371 +
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	match_part	15133	15229	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_14;Target=SGN-E246916 1 97 +;Parent=SGN-E246916_alignment_1
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	match_part	15336	15473	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_15;Target=SGN-E246916 98 235 +;Parent=SGN-E246916_alignment_1
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	match_part	17152	17288	0.978	+	0	ID=GTH_SGN_E_tom_potato_match_part_16;Target=SGN-E246916 236 371 +;Parent=SGN-E246916_alignment_1
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	match	15162	17787	0.994	+	0	ID=SGN-E269763_alignment_1;Target=SGN-E269763 1 462 +
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	match_part	15162	15229	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_17;Target=SGN-E269763 1 68 +;Parent=SGN-E269763_alignment_1
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	match_part	15336	15473	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_18;Target=SGN-E269763 69 206 +;Parent=SGN-E269763_alignment_1
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	match_part	17152	17288	0.978	+	0	ID=GTH_SGN_E_tom_potato_match_part_19;Target=SGN-E269763 207 342 +;Parent=SGN-E269763_alignment_1
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	match_part	17668	17787	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_20;Target=SGN-E269763 343 462 +;Parent=SGN-E269763_alignment_1
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	match	15186	17754	0.970	+	0	ID=SGN-E442326_alignment_1;Target=SGN-E442326 1 405 +
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	match_part	15186	15229	0.955	+	0	ID=GTH_SGN_E_tom_potato_match_part_21;Target=SGN-E442326 1 44 +;Parent=SGN-E442326_alignment_1
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	match_part	15336	15473	0.978	+	0	ID=GTH_SGN_E_tom_potato_match_part_22;Target=SGN-E442326 45 182 +;Parent=SGN-E442326_alignment_1
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	match_part	17152	17288	0.949	+	0	ID=GTH_SGN_E_tom_potato_match_part_23;Target=SGN-E442326 183 318 +;Parent=SGN-E442326_alignment_1
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	match_part	17668	17754	0.989	+	0	ID=GTH_SGN_E_tom_potato_match_part_24;Target=SGN-E442326 319 405 +;Parent=SGN-E442326_alignment_1
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	match	15394	17757	0.967	+	0	ID=SGN-E607535_alignment_1;Target=SGN-E607535 1 306 +
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	match_part	15394	15473	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_25;Target=SGN-E607535 1 80 +;Parent=SGN-E607535_alignment_1
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	match_part	17152	17288	0.942	+	0	ID=GTH_SGN_E_tom_potato_match_part_26;Target=SGN-E607535 81 216 +;Parent=SGN-E607535_alignment_1
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	match_part	17668	17757	0.978	+	0	ID=GTH_SGN_E_tom_potato_match_part_27;Target=SGN-E607535 217 306 +;Parent=SGN-E607535_alignment_1
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	match	15409	17801	0.958	+	0	ID=SGN-E250607_alignment_1;Target=SGN-E250607 1 335 +
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	match_part	15409	15473	0.985	+	0	ID=GTH_SGN_E_tom_potato_match_part_28;Target=SGN-E250607 1 65 +;Parent=SGN-E250607_alignment_1
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	match_part	17152	17288	0.912	+	0	ID=GTH_SGN_E_tom_potato_match_part_29;Target=SGN-E250607 66 201 +;Parent=SGN-E250607_alignment_1
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	match_part	17668	17801	0.993	+	0	ID=GTH_SGN_E_tom_potato_match_part_30;Target=SGN-E250607 202 335 +;Parent=SGN-E250607_alignment_1
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	match	20516	22839	0.996	+	0	ID=SGN-E700882_alignment_1;Target=SGN-E700882 17 892 +
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	match_part	20516	20564	0.939	+	0	ID=GTH_SGN_E_tom_potato_match_part_31;Target=SGN-E700882 17 65 +;Parent=SGN-E700882_alignment_1
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	match_part	20615	20633	0.842	+	0	ID=GTH_SGN_E_tom_potato_match_part_32;Target=SGN-E700882 66 84 +;Parent=SGN-E700882_alignment_1
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	match_part	20746	20862	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_33;Target=SGN-E700882 85 201 +;Parent=SGN-E700882_alignment_1
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	match_part	21247	21333	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_34;Target=SGN-E700882 202 288 +;Parent=SGN-E700882_alignment_1
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	match_part	21469	21545	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_35;Target=SGN-E700882 289 365 +;Parent=SGN-E700882_alignment_1
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	match_part	21756	21883	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_36;Target=SGN-E700882 366 493 +;Parent=SGN-E700882_alignment_1
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	match_part	22028	22161	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_37;Target=SGN-E700882 494 627 +;Parent=SGN-E700882_alignment_1
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	match_part	22576	22839	0.989	+	0	ID=GTH_SGN_E_tom_potato_match_part_38;Target=SGN-E700882 628 892 +;Parent=SGN-E700882_alignment_1
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	match	20541	21883	0.996	+	0	ID=SGN-E300531_alignment_1;Target=SGN-E300531 1 502 +
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	match_part	20541	20633	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_39;Target=SGN-E300531 1 93 +;Parent=SGN-E300531_alignment_1
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	match_part	20746	20862	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_40;Target=SGN-E300531 94 210 +;Parent=SGN-E300531_alignment_1
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	match_part	21247	21333	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_41;Target=SGN-E300531 211 297 +;Parent=SGN-E300531_alignment_1
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	match_part	21469	21545	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_42;Target=SGN-E300531 298 374 +;Parent=SGN-E300531_alignment_1
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	match_part	21756	21883	0.984	+	0	ID=GTH_SGN_E_tom_potato_match_part_43;Target=SGN-E300531 375 502 +;Parent=SGN-E300531_alignment_1
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	match	20555	22078	1.000	+	0	ID=SGN-E244663_alignment_1;Target=SGN-E244663 1 539 +
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	match_part	20555	20633	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_44;Target=SGN-E244663 1 79 +;Parent=SGN-E244663_alignment_1
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	match_part	20746	20862	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_45;Target=SGN-E244663 80 196 +;Parent=SGN-E244663_alignment_1
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	match_part	21247	21333	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_46;Target=SGN-E244663 197 283 +;Parent=SGN-E244663_alignment_1
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	match_part	21469	21545	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_47;Target=SGN-E244663 284 360 +;Parent=SGN-E244663_alignment_1
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	match_part	21756	21883	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_48;Target=SGN-E244663 361 488 +;Parent=SGN-E244663_alignment_1
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	match_part	22028	22078	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_49;Target=SGN-E244663 489 539 +;Parent=SGN-E244663_alignment_1
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	match	20575	22770	0.990	+	0	ID=SGN-E551898_alignment_1;Target=SGN-E551898 1 797 +
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	match_part	20575	20633	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_50;Target=SGN-E551898 1 59 +;Parent=SGN-E551898_alignment_1
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	match_part	20746	20862	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_51;Target=SGN-E551898 60 176 +;Parent=SGN-E551898_alignment_1
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	match_part	21247	21333	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_52;Target=SGN-E551898 177 263 +;Parent=SGN-E551898_alignment_1
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	match_part	21469	21545	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_53;Target=SGN-E551898 264 340 +;Parent=SGN-E551898_alignment_1
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	match_part	21756	21883	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_54;Target=SGN-E551898 341 468 +;Parent=SGN-E551898_alignment_1
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	match_part	22028	22161	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_55;Target=SGN-E551898 469 602 +;Parent=SGN-E551898_alignment_1
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	match_part	22576	22770	0.959	+	0	ID=GTH_SGN_E_tom_potato_match_part_56;Target=SGN-E551898 603 797 +;Parent=SGN-E551898_alignment_1
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	match	20767	22114	0.937	+	0	ID=SGN-E572735_alignment_1;Target=SGN-E572735 1 481 +
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	match_part	20767	20862	0.969	+	0	ID=GTH_SGN_E_tom_potato_match_part_57;Target=SGN-E572735 1 96 +;Parent=SGN-E572735_alignment_1
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	match_part	21247	21333	0.943	+	0	ID=GTH_SGN_E_tom_potato_match_part_58;Target=SGN-E572735 97 183 +;Parent=SGN-E572735_alignment_1
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	match_part	21469	21545	0.961	+	0	ID=GTH_SGN_E_tom_potato_match_part_59;Target=SGN-E572735 184 260 +;Parent=SGN-E572735_alignment_1
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	match_part	21756	21883	0.922	+	0	ID=GTH_SGN_E_tom_potato_match_part_60;Target=SGN-E572735 261 392 +;Parent=SGN-E572735_alignment_1
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	match_part	22028	22114	0.897	+	0	ID=GTH_SGN_E_tom_potato_match_part_61;Target=SGN-E572735 393 481 +;Parent=SGN-E572735_alignment_1
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	match	21247	22306	1.000	+	0	ID=SGN-E270644_alignment_1;Target=SGN-E270644 16 586 +
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	match_part	21247	21333	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_62;Target=SGN-E270644 16 102 +;Parent=SGN-E270644_alignment_1
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	match_part	21469	21545	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_63;Target=SGN-E270644 103 179 +;Parent=SGN-E270644_alignment_1
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	match_part	21756	21883	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_64;Target=SGN-E270644 180 307 +;Parent=SGN-E270644_alignment_1
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	match_part	22028	22306	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_65;Target=SGN-E270644 308 586 +;Parent=SGN-E270644_alignment_1
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	match	21795	22759	0.998	+	0	ID=SGN-E238878_alignment_1;Target=SGN-E238878 1 406 +
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	match_part	21795	21883	0.989	+	0	ID=GTH_SGN_E_tom_potato_match_part_66;Target=SGN-E238878 1 88 +;Parent=SGN-E238878_alignment_1
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	match_part	22028	22161	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_67;Target=SGN-E238878 89 222 +;Parent=SGN-E238878_alignment_1
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	match_part	22576	22759	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_68;Target=SGN-E238878 223 406 +;Parent=SGN-E238878_alignment_1
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	match	22067	22759	0.975	+	0	ID=SGN-E239377_alignment_1;Target=SGN-E239377 1 279 +
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	match_part	22067	22161	0.958	+	0	ID=GTH_SGN_E_tom_potato_match_part_69;Target=SGN-E239377 1 95 +;Parent=SGN-E239377_alignment_1
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	match_part	22576	22759	0.984	+	0	ID=GTH_SGN_E_tom_potato_match_part_70;Target=SGN-E239377 96 279 +;Parent=SGN-E239377_alignment_1
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	match	24264	24680	0.983	+	0	ID=SGN-E327322_alignment_1;Target=SGN-E327322 1 192 +
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	match_part	24264	24319	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_71;Target=SGN-E327322 1 56 +;Parent=SGN-E327322_alignment_1
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	match_part	24448	24567	0.975	+	0	ID=GTH_SGN_E_tom_potato_match_part_72;Target=SGN-E327322 57 177 +;Parent=SGN-E327322_alignment_1
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	match_part	24667	24680	0.857	+	0	ID=GTH_SGN_E_tom_potato_match_part_73;Target=SGN-E327322 178 192 +;Parent=SGN-E327322_alignment_1
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	match	24265	24687	0.909	+	0	ID=SGN-E399836_alignment_1;Target=SGN-E399836 1 195 +
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	match_part	24265	24319	0.873	+	0	ID=GTH_SGN_E_tom_potato_match_part_74;Target=SGN-E399836 1 55 +;Parent=SGN-E399836_alignment_1
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	match_part	24448	24567	0.925	+	0	ID=GTH_SGN_E_tom_potato_match_part_75;Target=SGN-E399836 56 174 +;Parent=SGN-E399836_alignment_1
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	match_part	24667	24687	0.857	+	0	ID=GTH_SGN_E_tom_potato_match_part_76;Target=SGN-E399836 175 195 +;Parent=SGN-E399836_alignment_1
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	match	24394	24683	0.989	+	0	ID=SGN-E337832_alignment_1;Target=SGN-E337832 1 191 +
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	match_part	24394	24567	0.989	+	0	ID=GTH_SGN_E_tom_potato_match_part_77;Target=SGN-E337832 1 174 +;Parent=SGN-E337832_alignment_1
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	match_part	24667	24683	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_78;Target=SGN-E337832 175 191 +;Parent=SGN-E337832_alignment_1
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	match	24453	24712	0.991	+	0	ID=SGN-E445242_alignment_1;Target=SGN-E445242 1 161 +
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	match_part	24453	24567	0.991	+	0	ID=GTH_SGN_E_tom_potato_match_part_79;Target=SGN-E445242 1 115 +;Parent=SGN-E445242_alignment_1
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	match_part	24667	24712	0.957	+	0	ID=GTH_SGN_E_tom_potato_match_part_80;Target=SGN-E445242 116 161 +;Parent=SGN-E445242_alignment_1
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	gene	9298	10224	.	-	0	ID=GTH_SGN_E_tom_potato_gene_1
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	mRNA	9298	10224	.	-	0	ID=GTH_SGN_E_tom_potato_gene_1_AGS_1;Parent=GTH_SGN_E_tom_potato_gene_1
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	exon	9298	10224	0.996	-	0	ID=GTH_SGN_E_tom_potato_exon_1;Parent=GTH_SGN_E_tom_potato_gene_1_AGS_1
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	gene	15122	17801	.	+	0	ID=GTH_SGN_E_tom_potato_gene_2
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	mRNA	15122	17801	.	+	0	ID=GTH_SGN_E_tom_potato_gene_2_AGS_1;Parent=GTH_SGN_E_tom_potato_gene_2
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	exon	15122	15229	1.000	+	0	ID=GTH_SGN_E_tom_potato_exon_2;Parent=GTH_SGN_E_tom_potato_gene_2_AGS_1
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	exon	15336	15473	1.000	+	0	ID=GTH_SGN_E_tom_potato_exon_3;Parent=GTH_SGN_E_tom_potato_gene_2_AGS_1
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	exon	17152	17288	0.978	+	0	ID=GTH_SGN_E_tom_potato_exon_4;Parent=GTH_SGN_E_tom_potato_gene_2_AGS_1
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	exon	17668	17801	1.000	+	0	ID=GTH_SGN_E_tom_potato_exon_5;Parent=GTH_SGN_E_tom_potato_gene_2_AGS_1
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	gene	20516	22839	.	+	0	ID=GTH_SGN_E_tom_potato_gene_3
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	mRNA	20541	22770	.	+	0	ID=GTH_SGN_E_tom_potato_gene_3_AGS_1;Parent=GTH_SGN_E_tom_potato_gene_3
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	exon	20541	20633	1.000	+	0	ID=GTH_SGN_E_tom_potato_exon_6;Parent=GTH_SGN_E_tom_potato_gene_3_AGS_1
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	exon	20746	20862	1.000	+	0	ID=GTH_SGN_E_tom_potato_exon_7;Parent=GTH_SGN_E_tom_potato_gene_3_AGS_1
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	exon	21247	21333	1.000	+	0	ID=GTH_SGN_E_tom_potato_exon_8;Parent=GTH_SGN_E_tom_potato_gene_3_AGS_1
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	exon	21469	21545	1.000	+	0	ID=GTH_SGN_E_tom_potato_exon_9;Parent=GTH_SGN_E_tom_potato_gene_3_AGS_1
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	exon	21756	21883	1.000	+	0	ID=GTH_SGN_E_tom_potato_exon_10;Parent=GTH_SGN_E_tom_potato_gene_3_AGS_1
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	exon	22028	22161	1.000	+	0	ID=GTH_SGN_E_tom_potato_exon_11;Parent=GTH_SGN_E_tom_potato_gene_3_AGS_1
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	exon	22576	22770	1.000	+	0	ID=GTH_SGN_E_tom_potato_exon_12;Parent=GTH_SGN_E_tom_potato_gene_3_AGS_1
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	mRNA	20541	22306	.	+	0	ID=GTH_SGN_E_tom_potato_gene_3_AGS_2;Parent=GTH_SGN_E_tom_potato_gene_3
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	exon	20541	20633	1.000	+	0	ID=GTH_SGN_E_tom_potato_exon_13;Parent=GTH_SGN_E_tom_potato_gene_3_AGS_2
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	exon	20746	20862	1.000	+	0	ID=GTH_SGN_E_tom_potato_exon_14;Parent=GTH_SGN_E_tom_potato_gene_3_AGS_2
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	exon	21247	21333	1.000	+	0	ID=GTH_SGN_E_tom_potato_exon_15;Parent=GTH_SGN_E_tom_potato_gene_3_AGS_2
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	exon	21469	21545	1.000	+	0	ID=GTH_SGN_E_tom_potato_exon_16;Parent=GTH_SGN_E_tom_potato_gene_3_AGS_2
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	exon	21756	21883	1.000	+	0	ID=GTH_SGN_E_tom_potato_exon_17;Parent=GTH_SGN_E_tom_potato_gene_3_AGS_2
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	exon	22028	22306	1.000	+	0	ID=GTH_SGN_E_tom_potato_exon_18;Parent=GTH_SGN_E_tom_potato_gene_3_AGS_2
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	mRNA	20516	22839	.	+	0	ID=GTH_SGN_E_tom_potato_gene_3_AGS_3;Parent=GTH_SGN_E_tom_potato_gene_3
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	exon	20516	20564	0.939	+	0	ID=GTH_SGN_E_tom_potato_exon_19;Parent=GTH_SGN_E_tom_potato_gene_3_AGS_3
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	exon	20615	20633	0.842	+	0	ID=GTH_SGN_E_tom_potato_exon_20;Parent=GTH_SGN_E_tom_potato_gene_3_AGS_3
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	exon	20746	20862	1.000	+	0	ID=GTH_SGN_E_tom_potato_exon_21;Parent=GTH_SGN_E_tom_potato_gene_3_AGS_3
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	exon	21247	21333	1.000	+	0	ID=GTH_SGN_E_tom_potato_exon_22;Parent=GTH_SGN_E_tom_potato_gene_3_AGS_3
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	exon	21469	21545	1.000	+	0	ID=GTH_SGN_E_tom_potato_exon_23;Parent=GTH_SGN_E_tom_potato_gene_3_AGS_3
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	exon	21756	21883	1.000	+	0	ID=GTH_SGN_E_tom_potato_exon_24;Parent=GTH_SGN_E_tom_potato_gene_3_AGS_3
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	exon	22028	22161	1.000	+	0	ID=GTH_SGN_E_tom_potato_exon_25;Parent=GTH_SGN_E_tom_potato_gene_3_AGS_3
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	exon	22576	22839	0.989	+	0	ID=GTH_SGN_E_tom_potato_exon_26;Parent=GTH_SGN_E_tom_potato_gene_3_AGS_3
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	gene	24264	24712	.	+	0	ID=GTH_SGN_E_tom_potato_gene_4
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	mRNA	24264	24712	.	+	0	ID=GTH_SGN_E_tom_potato_gene_4_AGS_1;Parent=GTH_SGN_E_tom_potato_gene_4
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	exon	24264	24319	1.000	+	0	ID=GTH_SGN_E_tom_potato_exon_27;Parent=GTH_SGN_E_tom_potato_gene_4_AGS_1
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	exon	24448	24567	0.991	+	0	ID=GTH_SGN_E_tom_potato_exon_28;Parent=GTH_SGN_E_tom_potato_gene_4_AGS_1
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	exon	24667	24712	0.957	+	0	ID=GTH_SGN_E_tom_potato_exon_29;Parent=GTH_SGN_E_tom_potato_gene_4_AGS_1
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	mRNA	24394	24712	.	+	0	ID=GTH_SGN_E_tom_potato_gene_4_AGS_2;Parent=GTH_SGN_E_tom_potato_gene_4
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	exon	24394	24567	0.989	+	0	ID=GTH_SGN_E_tom_potato_exon_30;Parent=GTH_SGN_E_tom_potato_gene_4_AGS_2
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato_potato	exon	24667	24712	1.000	+	0	ID=GTH_SGN_E_tom_potato_exon_31;Parent=GTH_SGN_E_tom_potato_gene_4_AGS_2
C09SLf0140E16.1	RepeatMasker	nucleotide_motif	10472	10636	604	-	0	ID=Copia00172_alignment_1;Target=Copia00172 319 501 -
C09SLf0140E16.1	RepeatMasker	nucleotide_motif	11754	12468	2242	-	0	ID=Gypsy00178_alignment_1;Target=Gypsy00178 2782 3493 -
C09SLf0140E16.1	RepeatMasker	nucleotide_motif	15069	15142	253	-	0	ID=Copia00105_alignment_1;Target=Copia00105 462 530 -
C09SLf0140E16.1	RepeatMasker	nucleotide_motif	18068	18137	254	+	0	ID=Gypsy00202_alignment_1;Target=Gypsy00202 2255 2325 +
C09SLf0140E16.1	RepeatMasker	nucleotide_motif	19207	19342	488	-	0	ID=TS_alignment_1;Target=TS 59 2015 -
C09SLf0140E16.1	BLAST_tomato_bacs	match	23572	24788	2371	+	0	ID=C09HBa0168F14.3_rev_alignment_1;blast_gaps=0;Target=clone-C09HBa0168F14.3 112975 114191 -;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=0.0
C09SLf0140E16.1	BLAST_tomato_bacs	match	21285	23000	3360	+	0	ID=C09HBa0168F14.3_rev_alignment_2;blast_gaps=0;Target=clone-C09HBa0168F14.3 114763 116478 -;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=0.0
C09SLf0140E16.1	Contigs	contig	1	5444	.	.	0	ID=contig1_1;length=5444
C09SLf0140E16.1	Contigs	contig	5446	5579	.	.	0	ID=contig2_1;length=134
C09SLf0140E16.1	Contigs	contig	5581	5611	.	.	0	ID=contig3_1;length=31
C09SLf0140E16.1	Contigs	contig	5712	18282	.	.	0	ID=contig4_1;length=12571
C09SLf0140E16.1	Contigs	contig	18284	18315	.	.	0	ID=contig5_1;length=32
C09SLf0140E16.1	Contigs	contig	18416	24788	.	.	0	ID=contig6_1;length=6373
C09SLf0140E16.1	BLAST_tomato_bac_ends	clone	4288	23704	496.5	.	0	is_problematic=1;ID=C09SLf0140E16.1-SL_FOS0110O22_1
C09SLf0140E16.1	BLAST_tomato_bac_ends	clone_start	4288	4676	729	+	0	ID=C09SLf0140E16.1-SL_FOS0110O22_pIBF_500130_1;blast_gaps=0;Target=SL_FOS0110O22_pIBF_500130 2 390 +;Parent=C09SLf0140E16.1-SL_FOS0110O22_1;is_problematic=1;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=0.0
C09SLf0140E16.1	BLAST_tomato_bac_ends	clone_end	23572	23704	264	-	0	ID=C09SLf0140E16.1-SL_FOS0110O22_pIBR_500131_1;blast_gaps=0;Target=SL_FOS0110O22_pIBR_500131 3 135 +;Parent=C09SLf0140E16.1-SL_FOS0110O22_1;is_problematic=1;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=2e-67
C09SLf0140E16.1	BLAST_tomato_bac_ends	clone_start	9143	9487	660	+	0	ID=C09SLf0140E16.1-SL_MboI0011L15_T7_148111_1;blast_gaps=1;Target=SL_MboI0011L15_T7_148111 1 344 +;is_problematic=0;blast_percent_identity=99.42;blast_mismatches=1;blast_evalue=0.0
C09SLf0140E16.1	BLAST_tomato_bac_ends	clone_start	19763	20252	971	+	0	ID=C09SLf0140E16.1-SL_MboI0003O24_T7_144986_1;blast_gaps=0;Target=SL_MboI0003O24_T7_144986 7 496 +;is_problematic=0;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=0.0
C09SLf0140E16.1	BLAST_tomato_bac_ends	clone_start	20467	21292	1574	+	0	ID=C09SLf0140E16.1-LE_HBa0016B07_T7_78781_1;blast_gaps=0;Target=LE_HBa0016B07_T7_78781 1 826 +;is_problematic=0;blast_percent_identity=99.03;blast_mismatches=8;blast_evalue=0.0
C09SLf0140E16.1	BLAST_tomato_bac_ends	clone_start	21280	21785	987	+	0	ID=C09SLf0140E16.1-LE_HBa0168F14_T7_123772_1;blast_gaps=0;Target=LE_HBa0168F14_T7_123772 1 506 +;is_problematic=0;blast_percent_identity=99.60;blast_mismatches=2;blast_evalue=0.0
C09SLf0140E16.1	BLAST_tomato_bac_ends	clone_end	23838	24349	973	-	0	ID=C09SLf0140E16.1-SL_FOS0008F07_pIBR_414418_1;blast_gaps=0;Target=SL_FOS0008F07_pIBR_414418 3 514 +;is_problematic=0;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=0.0
C09SLf0140E16.1	BLAST_tomato_bac_ends	clone_end	24242	24777	1049	-	0	ID=C09SLf0140E16.1-SL_FOS0140E16_pIBR_474433_1;blast_gaps=1;Target=SL_FOS0140E16_pIBR_474433 1 537 +;is_problematic=0;blast_percent_identity=99.81;blast_mismatches=0;blast_evalue=0.0
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato	match	9298	10105	0.999	-	0	ID=SGN-E545182_alignment_2;Target=SGN-E545182 1 808 +
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato	match_part	9298	10105	0.999	-	0	ID=GTH_SGN_E_tom_match_part_1;Target=SGN-E545182 1 808 +;Parent=SGN-E545182_alignment_2
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato	match	9326	10219	0.996	-	0	ID=SGN-E727209_alignment_2;Target=SGN-E727209 1 894 +
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato	match_part	9326	10219	0.996	-	0	ID=GTH_SGN_E_tom_match_part_2;Target=SGN-E727209 1 894 +;Parent=SGN-E727209_alignment_2
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato	match	9392	10224	0.989	-	0	ID=SGN-E697720_alignment_2;Target=SGN-E697720 1 833 +
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato	match_part	9392	10224	0.989	-	0	ID=GTH_SGN_E_tom_match_part_3;Target=SGN-E697720 1 833 +;Parent=SGN-E697720_alignment_2
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato	match	9447	10213	0.995	-	0	ID=SGN-E545183_alignment_2;Target=SGN-E545183 1 766 +
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato	match_part	9447	10213	0.995	-	0	ID=GTH_SGN_E_tom_match_part_4;Target=SGN-E545183 1 766 +;Parent=SGN-E545183_alignment_2
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato	match	9886	10212	0.954	-	0	ID=SGN-E308334_alignment_2;Target=SGN-E308334 1 324 +
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato	match_part	9886	10212	0.954	-	0	ID=GTH_SGN_E_tom_match_part_5;Target=SGN-E308334 1 324 +;Parent=SGN-E308334_alignment_2
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato	match	9934	10212	0.961	-	0	ID=SGN-E308333_alignment_2;Target=SGN-E308333 1 280 +
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato	match_part	9934	10212	0.961	-	0	ID=GTH_SGN_E_tom_match_part_6;Target=SGN-E308333 1 280 +;Parent=SGN-E308333_alignment_2
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato	match	15133	17288	0.992	+	0	ID=SGN-E246916_alignment_2;Target=SGN-E246916 1 371 +
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato	match_part	15133	15229	1.000	+	0	ID=GTH_SGN_E_tom_match_part_7;Target=SGN-E246916 1 97 +;Parent=SGN-E246916_alignment_2
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato	match_part	15336	15473	1.000	+	0	ID=GTH_SGN_E_tom_match_part_8;Target=SGN-E246916 98 235 +;Parent=SGN-E246916_alignment_2
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato	match_part	17152	17288	0.978	+	0	ID=GTH_SGN_E_tom_match_part_9;Target=SGN-E246916 236 371 +;Parent=SGN-E246916_alignment_2
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato	match	15162	17787	0.994	+	0	ID=SGN-E269763_alignment_2;Target=SGN-E269763 1 462 +
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato	match_part	15162	15229	1.000	+	0	ID=GTH_SGN_E_tom_match_part_10;Target=SGN-E269763 1 68 +;Parent=SGN-E269763_alignment_2
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato	match_part	15336	15473	1.000	+	0	ID=GTH_SGN_E_tom_match_part_11;Target=SGN-E269763 69 206 +;Parent=SGN-E269763_alignment_2
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato	match_part	17152	17288	0.978	+	0	ID=GTH_SGN_E_tom_match_part_12;Target=SGN-E269763 207 342 +;Parent=SGN-E269763_alignment_2
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato	match_part	17668	17787	1.000	+	0	ID=GTH_SGN_E_tom_match_part_13;Target=SGN-E269763 343 462 +;Parent=SGN-E269763_alignment_2
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato	match	15409	17801	0.958	+	0	ID=SGN-E250607_alignment_2;Target=SGN-E250607 1 335 +
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato	match_part	15409	15473	0.985	+	0	ID=GTH_SGN_E_tom_match_part_14;Target=SGN-E250607 1 65 +;Parent=SGN-E250607_alignment_2
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato	match_part	17152	17288	0.912	+	0	ID=GTH_SGN_E_tom_match_part_15;Target=SGN-E250607 66 201 +;Parent=SGN-E250607_alignment_2
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato	match_part	17668	17801	0.993	+	0	ID=GTH_SGN_E_tom_match_part_16;Target=SGN-E250607 202 335 +;Parent=SGN-E250607_alignment_2
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato	match	20516	22839	0.996	+	0	ID=SGN-E700882_alignment_2;Target=SGN-E700882 17 892 +
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato	match_part	20516	20564	0.939	+	0	ID=GTH_SGN_E_tom_match_part_17;Target=SGN-E700882 17 65 +;Parent=SGN-E700882_alignment_2
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato	match_part	20615	20633	0.842	+	0	ID=GTH_SGN_E_tom_match_part_18;Target=SGN-E700882 66 84 +;Parent=SGN-E700882_alignment_2
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato	match_part	20746	20862	1.000	+	0	ID=GTH_SGN_E_tom_match_part_19;Target=SGN-E700882 85 201 +;Parent=SGN-E700882_alignment_2
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato	match_part	21247	21333	1.000	+	0	ID=GTH_SGN_E_tom_match_part_20;Target=SGN-E700882 202 288 +;Parent=SGN-E700882_alignment_2
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato	match_part	21469	21545	1.000	+	0	ID=GTH_SGN_E_tom_match_part_21;Target=SGN-E700882 289 365 +;Parent=SGN-E700882_alignment_2
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato	match_part	21756	21883	1.000	+	0	ID=GTH_SGN_E_tom_match_part_22;Target=SGN-E700882 366 493 +;Parent=SGN-E700882_alignment_2
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato	match_part	22028	22161	1.000	+	0	ID=GTH_SGN_E_tom_match_part_23;Target=SGN-E700882 494 627 +;Parent=SGN-E700882_alignment_2
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato	match_part	22576	22839	0.989	+	0	ID=GTH_SGN_E_tom_match_part_24;Target=SGN-E700882 628 892 +;Parent=SGN-E700882_alignment_2
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato	match	20541	21883	0.996	+	0	ID=SGN-E300531_alignment_2;Target=SGN-E300531 1 502 +
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato	match_part	20541	20633	1.000	+	0	ID=GTH_SGN_E_tom_match_part_25;Target=SGN-E300531 1 93 +;Parent=SGN-E300531_alignment_2
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato	match_part	20746	20862	1.000	+	0	ID=GTH_SGN_E_tom_match_part_26;Target=SGN-E300531 94 210 +;Parent=SGN-E300531_alignment_2
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato	match_part	21247	21333	1.000	+	0	ID=GTH_SGN_E_tom_match_part_27;Target=SGN-E300531 211 297 +;Parent=SGN-E300531_alignment_2
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato	match_part	21469	21545	1.000	+	0	ID=GTH_SGN_E_tom_match_part_28;Target=SGN-E300531 298 374 +;Parent=SGN-E300531_alignment_2
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato	match_part	21756	21883	0.984	+	0	ID=GTH_SGN_E_tom_match_part_29;Target=SGN-E300531 375 502 +;Parent=SGN-E300531_alignment_2
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato	match	20555	22078	1.000	+	0	ID=SGN-E244663_alignment_2;Target=SGN-E244663 1 539 +
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato	match_part	20555	20633	1.000	+	0	ID=GTH_SGN_E_tom_match_part_30;Target=SGN-E244663 1 79 +;Parent=SGN-E244663_alignment_2
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato	match_part	20746	20862	1.000	+	0	ID=GTH_SGN_E_tom_match_part_31;Target=SGN-E244663 80 196 +;Parent=SGN-E244663_alignment_2
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato	match_part	21247	21333	1.000	+	0	ID=GTH_SGN_E_tom_match_part_32;Target=SGN-E244663 197 283 +;Parent=SGN-E244663_alignment_2
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato	match_part	21469	21545	1.000	+	0	ID=GTH_SGN_E_tom_match_part_33;Target=SGN-E244663 284 360 +;Parent=SGN-E244663_alignment_2
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato	match_part	21756	21883	1.000	+	0	ID=GTH_SGN_E_tom_match_part_34;Target=SGN-E244663 361 488 +;Parent=SGN-E244663_alignment_2
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato	match_part	22028	22078	1.000	+	0	ID=GTH_SGN_E_tom_match_part_35;Target=SGN-E244663 489 539 +;Parent=SGN-E244663_alignment_2
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato	match	20575	22770	0.990	+	0	ID=SGN-E551898_alignment_2;Target=SGN-E551898 1 797 +
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato	match_part	20575	20633	1.000	+	0	ID=GTH_SGN_E_tom_match_part_36;Target=SGN-E551898 1 59 +;Parent=SGN-E551898_alignment_2
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato	match_part	20746	20862	1.000	+	0	ID=GTH_SGN_E_tom_match_part_37;Target=SGN-E551898 60 176 +;Parent=SGN-E551898_alignment_2
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato	match_part	21247	21333	1.000	+	0	ID=GTH_SGN_E_tom_match_part_38;Target=SGN-E551898 177 263 +;Parent=SGN-E551898_alignment_2
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato	match_part	21469	21545	1.000	+	0	ID=GTH_SGN_E_tom_match_part_39;Target=SGN-E551898 264 340 +;Parent=SGN-E551898_alignment_2
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato	match_part	21756	21883	1.000	+	0	ID=GTH_SGN_E_tom_match_part_40;Target=SGN-E551898 341 468 +;Parent=SGN-E551898_alignment_2
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato	match_part	22028	22161	1.000	+	0	ID=GTH_SGN_E_tom_match_part_41;Target=SGN-E551898 469 602 +;Parent=SGN-E551898_alignment_2
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato	match_part	22576	22770	0.959	+	0	ID=GTH_SGN_E_tom_match_part_42;Target=SGN-E551898 603 797 +;Parent=SGN-E551898_alignment_2
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato	match	21247	22306	1.000	+	0	ID=SGN-E270644_alignment_2;Target=SGN-E270644 16 586 +
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato	match_part	21247	21333	1.000	+	0	ID=GTH_SGN_E_tom_match_part_43;Target=SGN-E270644 16 102 +;Parent=SGN-E270644_alignment_2
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato	match_part	21469	21545	1.000	+	0	ID=GTH_SGN_E_tom_match_part_44;Target=SGN-E270644 103 179 +;Parent=SGN-E270644_alignment_2
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato	match_part	21756	21883	1.000	+	0	ID=GTH_SGN_E_tom_match_part_45;Target=SGN-E270644 180 307 +;Parent=SGN-E270644_alignment_2
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato	match_part	22028	22306	1.000	+	0	ID=GTH_SGN_E_tom_match_part_46;Target=SGN-E270644 308 586 +;Parent=SGN-E270644_alignment_2
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato	match	21795	22759	0.998	+	0	ID=SGN-E238878_alignment_2;Target=SGN-E238878 1 406 +
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato	match_part	21795	21883	0.989	+	0	ID=GTH_SGN_E_tom_match_part_47;Target=SGN-E238878 1 88 +;Parent=SGN-E238878_alignment_2
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato	match_part	22028	22161	1.000	+	0	ID=GTH_SGN_E_tom_match_part_48;Target=SGN-E238878 89 222 +;Parent=SGN-E238878_alignment_2
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato	match_part	22576	22759	1.000	+	0	ID=GTH_SGN_E_tom_match_part_49;Target=SGN-E238878 223 406 +;Parent=SGN-E238878_alignment_2
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato	match	22067	22759	0.975	+	0	ID=SGN-E239377_alignment_2;Target=SGN-E239377 1 279 +
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato	match_part	22067	22161	0.958	+	0	ID=GTH_SGN_E_tom_match_part_50;Target=SGN-E239377 1 95 +;Parent=SGN-E239377_alignment_2
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato	match_part	22576	22759	0.984	+	0	ID=GTH_SGN_E_tom_match_part_51;Target=SGN-E239377 96 279 +;Parent=SGN-E239377_alignment_2
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato	match	24264	24680	0.983	+	0	ID=SGN-E327322_alignment_2;Target=SGN-E327322 1 192 +
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato	match_part	24264	24319	1.000	+	0	ID=GTH_SGN_E_tom_match_part_52;Target=SGN-E327322 1 56 +;Parent=SGN-E327322_alignment_2
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato	match_part	24448	24567	0.975	+	0	ID=GTH_SGN_E_tom_match_part_53;Target=SGN-E327322 57 177 +;Parent=SGN-E327322_alignment_2
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato	match_part	24667	24680	0.857	+	0	ID=GTH_SGN_E_tom_match_part_54;Target=SGN-E327322 178 192 +;Parent=SGN-E327322_alignment_2
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato	match	24394	24683	0.989	+	0	ID=SGN-E337832_alignment_2;Target=SGN-E337832 1 191 +
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato	match_part	24394	24567	0.989	+	0	ID=GTH_SGN_E_tom_match_part_55;Target=SGN-E337832 1 174 +;Parent=SGN-E337832_alignment_2
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato	match_part	24667	24683	1.000	+	0	ID=GTH_SGN_E_tom_match_part_56;Target=SGN-E337832 175 191 +;Parent=SGN-E337832_alignment_2
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato	gene	9298	10224	.	-	0	ID=GTH_SGN_E_tom_gene_1
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato	mRNA	9298	10224	.	-	0	ID=GTH_SGN_E_tom_gene_1_AGS_1;Parent=GTH_SGN_E_tom_gene_1
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato	exon	9298	10224	0.996	-	0	ID=GTH_SGN_E_tom_exon_1;Parent=GTH_SGN_E_tom_gene_1_AGS_1
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato	gene	15133	17801	.	+	0	ID=GTH_SGN_E_tom_gene_2
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato	mRNA	15133	17801	.	+	0	ID=GTH_SGN_E_tom_gene_2_AGS_1;Parent=GTH_SGN_E_tom_gene_2
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato	exon	15133	15229	1.000	+	0	ID=GTH_SGN_E_tom_exon_2;Parent=GTH_SGN_E_tom_gene_2_AGS_1
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato	exon	15336	15473	1.000	+	0	ID=GTH_SGN_E_tom_exon_3;Parent=GTH_SGN_E_tom_gene_2_AGS_1
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato	exon	17152	17288	0.978	+	0	ID=GTH_SGN_E_tom_exon_4;Parent=GTH_SGN_E_tom_gene_2_AGS_1
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato	exon	17668	17801	1.000	+	0	ID=GTH_SGN_E_tom_exon_5;Parent=GTH_SGN_E_tom_gene_2_AGS_1
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato	gene	20516	22839	.	+	0	ID=GTH_SGN_E_tom_gene_3
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato	mRNA	20541	22770	.	+	0	ID=GTH_SGN_E_tom_gene_3_AGS_1;Parent=GTH_SGN_E_tom_gene_3
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato	exon	20541	20633	1.000	+	0	ID=GTH_SGN_E_tom_exon_6;Parent=GTH_SGN_E_tom_gene_3_AGS_1
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato	exon	20746	20862	1.000	+	0	ID=GTH_SGN_E_tom_exon_7;Parent=GTH_SGN_E_tom_gene_3_AGS_1
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato	exon	21247	21333	1.000	+	0	ID=GTH_SGN_E_tom_exon_8;Parent=GTH_SGN_E_tom_gene_3_AGS_1
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato	exon	21469	21545	1.000	+	0	ID=GTH_SGN_E_tom_exon_9;Parent=GTH_SGN_E_tom_gene_3_AGS_1
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato	exon	21756	21883	1.000	+	0	ID=GTH_SGN_E_tom_exon_10;Parent=GTH_SGN_E_tom_gene_3_AGS_1
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato	exon	22028	22161	1.000	+	0	ID=GTH_SGN_E_tom_exon_11;Parent=GTH_SGN_E_tom_gene_3_AGS_1
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato	exon	22576	22770	1.000	+	0	ID=GTH_SGN_E_tom_exon_12;Parent=GTH_SGN_E_tom_gene_3_AGS_1
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato	mRNA	20541	22306	.	+	0	ID=GTH_SGN_E_tom_gene_3_AGS_2;Parent=GTH_SGN_E_tom_gene_3
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato	exon	20541	20633	1.000	+	0	ID=GTH_SGN_E_tom_exon_13;Parent=GTH_SGN_E_tom_gene_3_AGS_2
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato	exon	20746	20862	1.000	+	0	ID=GTH_SGN_E_tom_exon_14;Parent=GTH_SGN_E_tom_gene_3_AGS_2
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato	exon	21247	21333	1.000	+	0	ID=GTH_SGN_E_tom_exon_15;Parent=GTH_SGN_E_tom_gene_3_AGS_2
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato	exon	21469	21545	1.000	+	0	ID=GTH_SGN_E_tom_exon_16;Parent=GTH_SGN_E_tom_gene_3_AGS_2
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato	exon	21756	21883	1.000	+	0	ID=GTH_SGN_E_tom_exon_17;Parent=GTH_SGN_E_tom_gene_3_AGS_2
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato	exon	22028	22306	1.000	+	0	ID=GTH_SGN_E_tom_exon_18;Parent=GTH_SGN_E_tom_gene_3_AGS_2
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato	mRNA	20516	22839	.	+	0	ID=GTH_SGN_E_tom_gene_3_AGS_3;Parent=GTH_SGN_E_tom_gene_3
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato	exon	20516	20564	0.939	+	0	ID=GTH_SGN_E_tom_exon_19;Parent=GTH_SGN_E_tom_gene_3_AGS_3
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato	exon	20615	20633	0.842	+	0	ID=GTH_SGN_E_tom_exon_20;Parent=GTH_SGN_E_tom_gene_3_AGS_3
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato	exon	20746	20862	1.000	+	0	ID=GTH_SGN_E_tom_exon_21;Parent=GTH_SGN_E_tom_gene_3_AGS_3
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato	exon	21247	21333	1.000	+	0	ID=GTH_SGN_E_tom_exon_22;Parent=GTH_SGN_E_tom_gene_3_AGS_3
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato	exon	21469	21545	1.000	+	0	ID=GTH_SGN_E_tom_exon_23;Parent=GTH_SGN_E_tom_gene_3_AGS_3
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato	exon	21756	21883	1.000	+	0	ID=GTH_SGN_E_tom_exon_24;Parent=GTH_SGN_E_tom_gene_3_AGS_3
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato	exon	22028	22161	1.000	+	0	ID=GTH_SGN_E_tom_exon_25;Parent=GTH_SGN_E_tom_gene_3_AGS_3
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato	exon	22576	22839	0.989	+	0	ID=GTH_SGN_E_tom_exon_26;Parent=GTH_SGN_E_tom_gene_3_AGS_3
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato	gene	24264	24683	.	+	0	ID=GTH_SGN_E_tom_gene_4
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato	mRNA	24264	24680	.	+	0	ID=GTH_SGN_E_tom_gene_4_AGS_1;Parent=GTH_SGN_E_tom_gene_4
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato	exon	24264	24319	1.000	+	0	ID=GTH_SGN_E_tom_exon_27;Parent=GTH_SGN_E_tom_gene_4_AGS_1
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato	exon	24448	24567	0.975	+	0	ID=GTH_SGN_E_tom_exon_28;Parent=GTH_SGN_E_tom_gene_4_AGS_1
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato	exon	24667	24680	0.857	+	0	ID=GTH_SGN_E_tom_exon_29;Parent=GTH_SGN_E_tom_gene_4_AGS_1
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato	mRNA	24394	24683	.	+	0	ID=GTH_SGN_E_tom_gene_4_AGS_2;Parent=GTH_SGN_E_tom_gene_4
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato	exon	24394	24567	0.989	+	0	ID=GTH_SGN_E_tom_exon_30;Parent=GTH_SGN_E_tom_gene_4_AGS_2
C09SLf0140E16.1	GenomeThreader_SGN_E_tomato	exon	24667	24683	1.000	+	0	ID=GTH_SGN_E_tom_exon_31;Parent=GTH_SGN_E_tom_gene_4_AGS_2
C09SLf0140E16.1	AUGUSTUS_tom_cdna	gene	9486	10208	1	-	.	ID=g1_1
C09SLf0140E16.1	AUGUSTUS_tom_cdna	transcript	9486	10208	.	-	.	ID=g1.t1_1;Parent=g1_1
C09SLf0140E16.1	AUGUSTUS_tom_cdna	stop_codon	9486	9488	.	-	0	Parent=g1.t1_1
C09SLf0140E16.1	AUGUSTUS_tom_cdna	CDS	9486	10208	.	-	0	ID=g1.t1.cds_1;Parent=g1.t1_1
C09SLf0140E16.1	AUGUSTUS_tom_cdna	start_codon	10206	10208	.	-	0	Parent=g1.t1_1
C09SLf0140E16.1	AUGUSTUS_tom_cdna	gene	15218	17683	1	+	.	ID=g2_1
C09SLf0140E16.1	AUGUSTUS_tom_cdna	transcript	15218	17683	.	+	.	ID=g2.t1_1;Parent=g2_1
C09SLf0140E16.1	AUGUSTUS_tom_cdna	start_codon	15218	15220	.	+	0	Parent=g2.t1_1
C09SLf0140E16.1	AUGUSTUS_tom_cdna	CDS	15218	15229	.	+	0	ID=g2.t1.cds_1;Parent=g2.t1_1
C09SLf0140E16.1	AUGUSTUS_tom_cdna	CDS	15336	15473	.	+	0	ID=g2.t1.cds_2;Parent=g2.t1_1
C09SLf0140E16.1	AUGUSTUS_tom_cdna	CDS	17152	17288	.	+	0	ID=g2.t1.cds_3;Parent=g2.t1_1
C09SLf0140E16.1	AUGUSTUS_tom_cdna	CDS	17668	17683	.	+	1	ID=g2.t1.cds_4;Parent=g2.t1_1
C09SLf0140E16.1	AUGUSTUS_tom_cdna	stop_codon	17681	17683	.	+	0	Parent=g2.t1_1
C09SLf0140E16.1	AUGUSTUS_tom_cdna	gene	17794	22653	1	+	.	ID=g3_1
C09SLf0140E16.1	AUGUSTUS_tom_cdna	transcript	17794	22653	.	+	.	ID=g3.t1_1;Parent=g3_1
C09SLf0140E16.1	AUGUSTUS_tom_cdna	start_codon	17794	17796	.	+	0	Parent=g3.t1_1
C09SLf0140E16.1	AUGUSTUS_tom_cdna	CDS	17794	17801	.	+	0	ID=g3.t1.cds_1;Parent=g3.t1_1
C09SLf0140E16.1	AUGUSTUS_tom_cdna	CDS	20516	20633	.	+	1	ID=g3.t1.cds_2;Parent=g3.t1_1
C09SLf0140E16.1	AUGUSTUS_tom_cdna	CDS	20746	20862	.	+	0	ID=g3.t1.cds_3;Parent=g3.t1_1
C09SLf0140E16.1	AUGUSTUS_tom_cdna	CDS	21247	21333	.	+	0	ID=g3.t1.cds_4;Parent=g3.t1_1
C09SLf0140E16.1	AUGUSTUS_tom_cdna	CDS	21469	21545	.	+	0	ID=g3.t1.cds_5;Parent=g3.t1_1
C09SLf0140E16.1	AUGUSTUS_tom_cdna	CDS	21756	21883	.	+	1	ID=g3.t1.cds_6;Parent=g3.t1_1
C09SLf0140E16.1	AUGUSTUS_tom_cdna	CDS	22028	22161	.	+	2	ID=g3.t1.cds_7;Parent=g3.t1_1
C09SLf0140E16.1	AUGUSTUS_tom_cdna	CDS	22576	22653	.	+	0	ID=g3.t1.cds_8;Parent=g3.t1_1
C09SLf0140E16.1	AUGUSTUS_tom_cdna	stop_codon	22651	22653	.	+	0	Parent=g3.t1_1
C09SLf0140E16.1	tRNAscan-SE	tRNA	23079	23158	68.72	+	0	ID=tRNA:Leu_1;codon=TAG;aminoacid=Leu
C09SLf0140E16.1	AUGUSTUS_ab_initio	gene	9486	10208	1	-	.	ID=g1_2
C09SLf0140E16.1	AUGUSTUS_ab_initio	transcript	9486	10208	.	-	.	ID=g1.t1_2;Parent=g1_2
C09SLf0140E16.1	AUGUSTUS_ab_initio	stop_codon	9486	9488	.	-	0	Parent=g1.t1_2
C09SLf0140E16.1	AUGUSTUS_ab_initio	CDS	9486	10208	.	-	0	ID=g1.t1.cds_2;Parent=g1.t1_2
C09SLf0140E16.1	AUGUSTUS_ab_initio	start_codon	10206	10208	.	-	0	Parent=g1.t1_2
C09SLf0140E16.1	AUGUSTUS_tom_ugs	gene	9486	10208	1	-	.	ID=g1_3
C09SLf0140E16.1	AUGUSTUS_tom_ugs	transcript	9486	10208	.	-	.	ID=g1.t1_3;Parent=g1_3
C09SLf0140E16.1	AUGUSTUS_tom_ugs	stop_codon	9486	9488	.	-	0	Parent=g1.t1_3
C09SLf0140E16.1	AUGUSTUS_tom_ugs	CDS	9486	10208	.	-	0	ID=g1.t1.cds_3;Parent=g1.t1_3
C09SLf0140E16.1	AUGUSTUS_tom_ugs	start_codon	10206	10208	.	-	0	Parent=g1.t1_3
C09SLf0140E16.1	AUGUSTUS_tom_ugs	gene	15218	22653	1	+	.	ID=g2_2
C09SLf0140E16.1	AUGUSTUS_tom_ugs	transcript	15218	22653	.	+	.	ID=g2.t1_2;Parent=g2_2
C09SLf0140E16.1	AUGUSTUS_tom_ugs	start_codon	15218	15220	.	+	0	Parent=g2.t1_2
C09SLf0140E16.1	AUGUSTUS_tom_ugs	CDS	15218	15229	.	+	0	ID=g2.t1.cds_5;Parent=g2.t1_2
C09SLf0140E16.1	AUGUSTUS_tom_ugs	CDS	15336	15473	.	+	0	ID=g2.t1.cds_6;Parent=g2.t1_2
C09SLf0140E16.1	AUGUSTUS_tom_ugs	CDS	17152	17288	.	+	0	ID=g2.t1.cds_7;Parent=g2.t1_2
C09SLf0140E16.1	AUGUSTUS_tom_ugs	CDS	20516	20633	.	+	1	ID=g2.t1.cds_8;Parent=g2.t1_2
C09SLf0140E16.1	AUGUSTUS_tom_ugs	CDS	20746	20862	.	+	0	ID=g2.t1.cds_9;Parent=g2.t1_2
C09SLf0140E16.1	AUGUSTUS_tom_ugs	CDS	21247	21333	.	+	0	ID=g2.t1.cds_10;Parent=g2.t1_2
C09SLf0140E16.1	AUGUSTUS_tom_ugs	CDS	21469	21545	.	+	0	ID=g2.t1.cds_11;Parent=g2.t1_2
C09SLf0140E16.1	AUGUSTUS_tom_ugs	CDS	21756	21883	.	+	1	ID=g2.t1.cds_12;Parent=g2.t1_2
C09SLf0140E16.1	AUGUSTUS_tom_ugs	CDS	22028	22161	.	+	2	ID=g2.t1.cds_13;Parent=g2.t1_2
C09SLf0140E16.1	AUGUSTUS_tom_ugs	CDS	22576	22653	.	+	0	ID=g2.t1.cds_14;Parent=g2.t1_2
C09SLf0140E16.1	AUGUSTUS_tom_ugs	stop_codon	22651	22653	.	+	0	Parent=g2.t1_2
C09SLf0140E16.1	GenomeThreader_SGN_U_tomato	match	9298	10214	0.999	-	0	ID=SGN-U324067_alignment_1;Target=SGN-U324067 1 917 +
C09SLf0140E16.1	GenomeThreader_SGN_U_tomato	match_part	9298	10214	0.999	-	0	ID=GTH_SGN_U_tom_match_part_1;Target=SGN-U324067 1 917 +;Parent=SGN-U324067_alignment_1
C09SLf0140E16.1	GenomeThreader_SGN_U_tomato	gene	9298	10214	.	-	0	ID=GTH_SGN_U_tom_gene_1
C09SLf0140E16.1	GenomeThreader_SGN_U_tomato	mRNA	9298	10214	.	-	0	ID=GTH_SGN_U_tom_gene_1_AGS_1;Parent=GTH_SGN_U_tom_gene_1
C09SLf0140E16.1	GenomeThreader_SGN_U_tomato	exon	9298	10214	0.999	-	0	ID=GTH_SGN_U_tom_exon_1;Parent=GTH_SGN_U_tom_gene_1_AGS_1
C09SLf0140E16.1	AUGUSTUS_tom_pot_cdna	gene	9486	10208	1	-	.	ID=g1_4
C09SLf0140E16.1	AUGUSTUS_tom_pot_cdna	transcript	9486	10208	.	-	.	ID=g1.t1_4;Parent=g1_4
C09SLf0140E16.1	AUGUSTUS_tom_pot_cdna	stop_codon	9486	9488	.	-	0	Parent=g1.t1_4
C09SLf0140E16.1	AUGUSTUS_tom_pot_cdna	CDS	9486	10208	.	-	0	ID=g1.t1.cds_4;Parent=g1.t1_4
C09SLf0140E16.1	AUGUSTUS_tom_pot_cdna	start_codon	10206	10208	.	-	0	Parent=g1.t1_4
C09SLf0140E16.1	AUGUSTUS_tom_pot_cdna	gene	15227	17683	1	+	.	ID=g2_3
C09SLf0140E16.1	AUGUSTUS_tom_pot_cdna	transcript	15227	17683	.	+	.	ID=g2.t1_3;Parent=g2_3
C09SLf0140E16.1	AUGUSTUS_tom_pot_cdna	start_codon	15227	15229	.	+	0	Parent=g2.t1_3
C09SLf0140E16.1	AUGUSTUS_tom_pot_cdna	CDS	15227	15229	.	+	0	ID=g2.t1.cds_15;Parent=g2.t1_3
C09SLf0140E16.1	AUGUSTUS_tom_pot_cdna	CDS	15336	15473	.	+	0	ID=g2.t1.cds_16;Parent=g2.t1_3
C09SLf0140E16.1	AUGUSTUS_tom_pot_cdna	CDS	17152	17288	.	+	0	ID=g2.t1.cds_17;Parent=g2.t1_3
C09SLf0140E16.1	AUGUSTUS_tom_pot_cdna	CDS	17668	17683	.	+	1	ID=g2.t1.cds_18;Parent=g2.t1_3
C09SLf0140E16.1	AUGUSTUS_tom_pot_cdna	stop_codon	17681	17683	.	+	0	Parent=g2.t1_3
C09SLf0140E16.1	AUGUSTUS_tom_pot_cdna	gene	17794	22653	1	+	.	ID=g3_2
C09SLf0140E16.1	AUGUSTUS_tom_pot_cdna	transcript	17794	22653	.	+	.	ID=g3.t1_2;Parent=g3_2
C09SLf0140E16.1	AUGUSTUS_tom_pot_cdna	start_codon	17794	17796	.	+	0	Parent=g3.t1_2
C09SLf0140E16.1	AUGUSTUS_tom_pot_cdna	CDS	17794	17801	.	+	0	ID=g3.t1.cds_9;Parent=g3.t1_2
C09SLf0140E16.1	AUGUSTUS_tom_pot_cdna	CDS	20516	20633	.	+	1	ID=g3.t1.cds_10;Parent=g3.t1_2
C09SLf0140E16.1	AUGUSTUS_tom_pot_cdna	CDS	20746	20862	.	+	0	ID=g3.t1.cds_11;Parent=g3.t1_2
C09SLf0140E16.1	AUGUSTUS_tom_pot_cdna	CDS	21247	21333	.	+	0	ID=g3.t1.cds_12;Parent=g3.t1_2
C09SLf0140E16.1	AUGUSTUS_tom_pot_cdna	CDS	21469	21545	.	+	0	ID=g3.t1.cds_13;Parent=g3.t1_2
C09SLf0140E16.1	AUGUSTUS_tom_pot_cdna	CDS	21756	21883	.	+	1	ID=g3.t1.cds_14;Parent=g3.t1_2
C09SLf0140E16.1	AUGUSTUS_tom_pot_cdna	CDS	22028	22161	.	+	2	ID=g3.t1.cds_15;Parent=g3.t1_2
C09SLf0140E16.1	AUGUSTUS_tom_pot_cdna	CDS	22576	22653	.	+	0	ID=g3.t1.cds_16;Parent=g3.t1_2
C09SLf0140E16.1	AUGUSTUS_tom_pot_cdna	stop_codon	22651	22653	.	+	0	Parent=g3.t1_2