SW perc perc perc query position in query matching repeat position in repeat score div. del. ins. sequence begin end (left) repeat class/family begin end (left) ID 833 23.2 1.8 0.9 C09SLe0076N09.1 1307 1528 (137840) + TLP1 Unknown 387 610 (52) 1 553 16.3 1.1 0.0 C09SLe0076N09.1 1727 1818 (137550) C Copia00143 Copia (5103) 201 109 2 357 15.9 1.6 1.6 C09SLe0076N09.1 1953 2016 (137352) C Copia00143 Copia (5165) 139 76 2 345 14.1 0.0 8.2 C09SLe0076N09.1 5005 5089 (134279) C Copia00105 Copia (175) 8682 8605 3 320 19.1 0.0 2.9 C09SLe0076N09.1 5084 5153 (134215) C Copia00105 Copia (175) 8682 8615 3 * 389 28.9 1.6 0.8 C09SLe0076N09.1 12109 12257 (127111) C Copia00147 Copia (2870) 1917 1523 4 728 32.2 5.1 2.7 C09SLe0076N09.1 12738 13263 (126105) C Copia00061 Copia (3861) 733 195 5 * 804 30.6 6.4 2.9 C09SLe0076N09.1 12839 13292 (126076) + Copia00215 Copia 3948 4417 (135) 6 358 22.2 11.4 5.7 C09SLe0076N09.1 14604 14708 (124660) + SONATA1 Unknown 7 117 (126) 7 345 28.1 3.9 1.5 C09SLe0076N09.1 25846 25975 (113393) + Unknown00040 Unknown 4383 4515 (167) 8 623 19.4 1.7 13.1 C09SLe0076N09.1 32804 33093 (106275) C Copia00113 Copia (6912) 5494 5238 9 461 24.6 8.2 3.5 C09SLe0076N09.1 33066 33297 (106071) C Copia00039 Copia (4052) 498 256 10 468 19.8 0.7 11.0 C09SLe0076N09.1 33096 33231 (106137) + Copia00113 Copia 5318 5439 (6967) 11 422 22.3 4.4 4.4 C09SLe0076N09.1 34259 34394 (104974) C Unknown00043 Unknown (5882) 5442 5307 12 541 17.1 10.8 0.0 C09SLe0076N09.1 36077 36187 (103181) + HarbN_I Unknown 83 205 (0) 13 443 23.0 0.7 5.6 C09SLe0076N09.1 38059 38182 (101186) + TS Unknown 64 2052 (3) 14 333 22.4 8.2 0.0 C09SLe0076N09.1 39933 40017 (99351) + SOD_SINE Unknown 104 195 (50) 15 230 24.6 0.0 1.5 C09SLe0076N09.1 43956 44021 (95347) + Copia00151 Copia 9786 9850 (911) 16 225 20.0 3.6 5.4 C09SLe0076N09.1 65452 65472 (73896) + Unknown00049 Unknown 4579 4686 (4344) 17 690 2.2 0.0 0.0 C09SLe0076N09.1 65473 65561 (73807) C Copia00018 Copia (4297) 89 1 18 275 0.0 0.0 0.0 C09SLe0076N09.1 65562 65592 (73776) C Copia00018 Copia (4355) 31 1 18 502 4.0 1.3 0.0 C09SLe0076N09.1 65593 65667 (73701) + Unknown00049 Unknown 7220 7295 (1736) 19 * 35646 3.7 0.4 1.0 C09SLe0076N09.1 65618 70065 (69303) C Copia00170 Copia (0) 4326 1 20 1375 5.7 0.5 0.0 C09SLe0076N09.1 69978 70171 (69197) + Unknown00049 Unknown 4568 4762 (4269) 21 * 842 20.1 4.0 5.2 C09SLe0076N09.1 72344 72595 (66773) + Unknown00019 Unknown 48 296 (14337) 22 * 949 15.4 5.2 12.3 C09SLe0076N09.1 72427 72775 (66593) C Copia00110 Copia (561) 13571 13248 23 1028 20.4 5.0 6.5 C09SLe0076N09.1 79413 79690 (59678) C Copia00105 Copia (17) 8840 8567 24 450 23.7 5.9 5.9 C09SLe0076N09.1 83716 83935 (55433) C Copia00105 Copia (18) 8839 8620 25 4215 7.8 4.6 3.1 C09SLe0076N09.1 87198 87845 (51523) + Unknown00019 Unknown 48 705 (13928) 26 225 13.9 4.1 1.4 C09SLe0076N09.1 88891 88963 (50405) + Copia00105 Copia 8037 8111 (746) 27 443 20.8 2.0 0.0 C09SLe0076N09.1 88979 89079 (50289) + TLP2 Unknown 127 229 (77) 28 679 7.6 0.0 1.1 C09SLe0076N09.1 90281 90373 (48995) + Unknown00046 Unknown 2744 2835 (7209) 29 229 30.8 3.3 1.1 C09SLe0076N09.1 90707 90798 (48570) C Copia00087 Copia (1973) 2933 2840 30 625 31.1 8.9 1.6 C09SLe0076N09.1 90863 91231 (48137) C SHACOP11_I_MT Unknown (2437) 1955 1560 31 881 5.7 0.0 0.0 C09SLe0076N09.1 91347 91468 (47900) + Copia00200 Copia 4636 4757 (0) 32 2157 5.0 3.2 0.0 C09SLe0076N09.1 91603 91884 (47484) + Copia00090 Copia 1 291 (4584) 33 252 18.5 1.2 0.0 C09SLe0076N09.1 93298 93378 (45990) C SHAMUDRAV_MT Unknown (5172) 1634 1553 34 264 9.1 6.0 1.7 C09SLe0076N09.1 93313 93337 (46031) + SHAMUDRAV_MT Unknown 48 573 (1088) 35 237 9.3 0.0 0.0 C09SLe0076N09.1 93338 93391 (45977) C Copia00105 Copia (1338) 7519 7466 36 264 9.1 6.0 1.7 C09SLe0076N09.1 93392 93436 (45932) + SHAMUDRAV_MT Unknown 574 1537 (124) 35 660 17.6 0.7 4.7 C09SLe0076N09.1 94467 94615 (44753) + Unknown00029 Unknown 1103 1245 (4464) 37 * 5565 19.0 3.2 1.0 C09SLe0076N09.1 94495 95619 (43749) C Gypsy00077 Gypsy (3058) 3055 1906 38 1179 15.6 2.8 6.9 C09SLe0076N09.1 97939 98228 (41140) + Copia00145 Copia 1206 1483 (10936) 39 40380 4.3 1.1 0.7 C09SLe0076N09.1 102141 108776 (30592) C Copia00109 Copia (4) 5718 708 40 561 28.6 1.1 0.6 C09SLe0076N09.1 109958 110133 (29235) C GYPSODE1_LTR Unknown (2554) 409 233 41 292 24.7 3.5 0.0 C09SLe0076N09.1 110277 110361 (29007) + Gypsy00034 Gypsy 681 768 (6237) 42 262 30.6 4.1 0.0 C09SLe0076N09.1 110632 110729 (28639) C GYPSODE1_LTR Unknown (2560) 403 302 43 299 15.5 9.4 5.8 C09SLe0076N09.1 110977 111117 (28251) C SHACOP16_LTR_MT Unknown (17) 612 200 44 * 39155 2.6 0.1 0.1 C09SLe0076N09.1 111036 115628 (23740) + Copia00004 Copia 1 4593 (0) 45 5909 5.1 0.1 0.4 C09SLe0076N09.1 115612 116364 (23004) C TOTO1_LP_I Unknown (271) 3258 2508 46 * 308 28.7 1.1 0.0 C09SLe0076N09.1 116362 116455 (22913) C GYPSODE1_LTR Unknown (2587) 376 282 47 * 417 5.3 0.0 0.0 C09SLe0076N09.1 117545 117601 (21767) + Copia00004 Copia 1009 1065 (3528) 48 482 29.8 5.9 1.8 C09SLe0076N09.1 120377 120598 (18770) C Copia00089 Copia (7624) 3832 3602 49 226 29.1 6.5 4.9 C09SLe0076N09.1 130988 131110 (8258) + HAT1_MT Unknown 1 125 (4464) 50 233 21.8 3.6 6.0 C09SLe0076N09.1 131822 131904 (7464) + Unknown00050 Unknown 3779 3859 (1772) 51 298 24.2 2.1 0.0 C09SLe0076N09.1 133782 133876 (5492) + Unknown00049 Unknown 8119 8215 (816) 52 3263 30.3 3.5 3.6 C09SLe0076N09.1 133987 135663 (3705) C Copia00082 Copia (1961) 2446 773 53 12841 23.1 3.5 3.2 C09SLe0076N09.1 135844 139366 (2) C TORTL1 Unknown (5) 9690 6159 54 * 13882 19.0 0.7 1.7 C09SLe0076N09.1 136628 139368 (0) C Copia00212 Copia (1) 8172 5459 55