SW perc perc perc query position in query matching repeat position in repeat score div. del. ins. sequence begin end (left) repeat class/family begin end (left) ID 229 10.0 12.0 0.0 C09SLm0017L21.1 10 59 (127615) C Copia00130 Copia (1602) 2411 2356 1 * 2382 28.7 1.5 1.1 C09SLm0017L21.1 30 851 (126823) C Copia00082 Copia (2810) 1597 773 2 16586 21.9 3.0 2.8 C09SLm0017L21.1 1032 5151 (122523) C TORTL1 Unknown (5) 9690 5563 3 * 38731 19.3 2.0 1.9 C09SLm0017L21.1 1823 9688 (117986) + Copia00072 Copia 1 7877 (0) 4 19391 17.8 1.2 0.7 C09SLm0017L21.1 6859 10476 (117198) C TORTL1 Unknown (6057) 3638 1 5 * 335 31.9 4.7 4.4 C09SLm0017L21.1 10575 10849 (116825) C Copia00021 Copia (1853) 2398 2123 6 235 31.3 9.4 2.4 C09SLm0017L21.1 12300 12469 (115205) C ATCOPIA21I Unknown (2930) 1572 1391 7 * 485 31.1 6.0 6.0 C09SLm0017L21.1 12339 12818 (114856) + Copia00105 Copia 2724 3203 (5654) 8 1081 29.0 5.2 3.0 C09SLm0017L21.1 13840 14586 (113088) C Copia00082 Copia (3679) 792 3 9 252 9.7 0.0 4.6 C09SLm0017L21.1 15192 15256 (112418) + Gypsy00178 Gypsy 6503 6564 (2527) 10 * 423 5.6 1.1 0.0 C09SLm0017L21.1 15199 15287 (112387) + HELITRON7_OS Unknown 1577 1666 (8487) 11 348 24.1 4.8 0.7 C09SLm0017L21.1 15512 15657 (112017) C SONATA3 Unknown (18) 229 78 12 252 18.5 3.2 1.1 C09SLm0017L21.1 15646 15738 (111936) C SONATA1 Unknown (85) 158 64 13 * 3808 10.9 1.7 2.3 C09SLm0017L21.1 17408 18053 (109621) + Copia00110 Copia 12982 13623 (509) 14 570 19.6 9.9 3.2 C09SLm0017L21.1 18001 18295 (109379) + Gypsy00073 Gypsy 1066 1375 (10709) 15 * 4303 5.4 6.9 3.1 C09SLm0017L21.1 18413 19048 (108626) + Unknown00019 Unknown 48 707 (13926) 16 2966 9.6 8.1 1.0 C09SLm0017L21.1 19072 19555 (108119) + Copia00110 Copia 13613 14130 (2) 17 1407 11.9 0.9 3.0 C09SLm0017L21.1 19802 20034 (107640) C Unknown00025 Unknown (552) 5756 5529 18 * 11239 9.9 4.0 0.4 C09SLm0017L21.1 19860 21529 (106145) + Copia00110 Copia 2 1732 (12400) 19 2250 29.7 2.1 0.7 C09SLm0017L21.1 21619 22475 (105199) C Copia00065 Copia (1784) 2180 1312 20 350 35.9 0.5 0.5 C09SLm0017L21.1 22539 22759 (104915) C Copia00065 Copia (3367) 597 377 20 244 35.1 2.4 1.9 C09SLm0017L21.1 22573 22781 (104893) C SHACOP21_I_MT Unknown (3376) 683 474 21 * 236 23.1 9.3 3.7 C09SLm0017L21.1 24138 24245 (103429) C RAVLIN_MT Unknown (993) 2814 2701 22 946 34.5 4.8 4.2 C09SLm0017L21.1 24666 26019 (101655) C Unknown00051 Unknown (2127) 3329 1968 23 586 15.4 0.0 0.0 C09SLm0017L21.1 28434 28543 (99131) + Unknown00049 Unknown 1745 1854 (7177) 24 766 27.9 5.1 6.5 C09SLm0017L21.1 28629 29137 (98537) + Copia00191 Copia 3807 4308 (418) 25 243 21.1 2.5 3.8 C09SLm0017L21.1 29258 29336 (98338) C Gypsy00073 Gypsy (23) 12061 11984 26 366 26.4 1.8 1.3 C09SLm0017L21.1 32750 32872 (94802) + TS Unknown 58 2039 (20) 27 28177 7.6 2.1 1.3 C09SLm0017L21.1 33876 37779 (89895) + Copia00068 Copia 1 3923 (70) 28 268 29.4 3.2 6.4 C09SLm0017L21.1 37646 37801 (89873) C Copia00172 Copia (6371) 256 106 29 * 364 7.7 21.5 0.0 C09SLm0017L21.1 37836 37900 (89774) + Copia00068 Copia 3915 3993 (0) 30 361 11.9 1.2 2.3 C09SLm0017L21.1 39847 39863 (87811) + Gypsy00042 Gypsy 5927 6007 (1487) 31 367 1.5 0.0 0.0 C09SLm0017L21.1 39864 39928 (87746) + HELITRON7_OS Unknown 1619 1683 (8470) 32 225 20.6 0.0 1.6 C09SLm0017L21.1 39893 39956 (87718) C Gypsy00155 Gypsy (1214) 5435 5373 33 * 286 27.1 7.8 1.9 C09SLm0017L21.1 45241 45394 (82280) + Unknown00049 Unknown 8105 8267 (764) 34 420 27.1 0.6 4.8 C09SLm0017L21.1 47550 47716 (79958) + Unknown00049 Unknown 2439 2598 (6433) 35 2137 7.9 2.4 0.0 C09SLm0017L21.1 51752 52041 (75633) C Unknown00034 Unknown (5076) 4001 3705 36 2221 11.9 2.7 0.6 C09SLm0017L21.1 53140 53477 (74197) + Unknown00034 Unknown 3690 4034 (5043) 37 339 5.9 0.9 0.0 C09SLm0017L21.1 53484 53562 (74112) C Copia00181 Copia (366) 7534 1796 38 502 28.6 7.2 4.4 C09SLm0017L21.1 54741 54989 (72685) C Gypsy00023 Gypsy (22) 5309 5054 39 240 18.7 8.9 5.1 C09SLm0017L21.1 55953 56031 (71643) C Gypsy00108 Gypsy (1229) 4047 3966 40 399 23.7 9.2 0.8 C09SLm0017L21.1 57301 57419 (70255) C Gypsy00196 Gypsy (4364) 338 210 41 397 27.1 0.6 5.5 C09SLm0017L21.1 57579 57742 (69932) + Copia00089 Copia 3677 3832 (7624) 42 353 4.4 2.1 0.6 C09SLm0017L21.1 58472 58488 (69186) + GYCUME1_LTR Unknown 371 1667 (4297) 43 294 5.7 1.4 0.0 C09SLm0017L21.1 58489 58558 (69116) + Copia00105 Copia 7462 7532 (1325) 44 * 325 5.3 6.6 0.0 C09SLm0017L21.1 58523 58598 (69076) C MUDSOLT1 Unknown (3825) 517 437 45 353 4.4 2.1 0.6 C09SLm0017L21.1 58559 58582 (69092) + GYCUME1_LTR Unknown 1668 3531 (2433) 43 1335 22.7 5.6 6.4 C09SLm0017L21.1 71328 71826 (55848) C Gypsy00046 Gypsy (6322) 4749 4255 46 1444 20.5 3.2 3.9 C09SLm0017L21.1 71367 71802 (55872) + Gypsy00155 Gypsy 4874 5306 (1343) 47 361 7.7 1.9 0.0 C09SLm0017L21.1 71843 71894 (55780) + Copia00078 Copia 2981 3033 (0) 48 2129 16.7 0.5 0.0 C09SLm0017L21.1 72155 72543 (55131) + Copia00078 Copia 2 392 (2641) 49 2090 19.9 5.5 10.0 C09SLm0017L21.1 72541 73466 (54208) C Gypsy00191 Gypsy (84) 4164 3281 50 * 669 27.5 1.6 2.0 C09SLm0017L21.1 73489 73740 (53934) + Copia00089 Copia 2742 2992 (8464) 51 1074 10.3 0.0 0.0 C09SLm0017L21.1 74352 74497 (53177) + Copia00143 Copia 77 222 (5082) 52 * 1122 14.1 2.8 3.2 C09SLm0017L21.1 74486 74703 (52971) + Copia00143 Copia 39 9644 (1117) 53 288 27.9 1.8 0.9 C09SLm0017L21.1 76457 76568 (51106) C Copia00068 Copia (278) 3715 3603 54 1713 32.2 5.1 5.7 C09SLm0017L21.1 76575 77140 (50534) C Copia00201 Copia (488) 2928 1453 55 1911 31.6 2.1 2.2 C09SLm0017L21.1 77141 78059 (49615) + SHACOP18_I_MT Unknown 982 1899 (2037) 56 9417 29.1 3.5 4.4 C09SLm0017L21.1 78410 82808 (44866) C Copia00082 Copia (46) 4361 1 57 813 27.3 2.4 3.6 C09SLm0017L21.1 83099 83429 (44245) C Copia00068 Copia (1862) 2131 1805 54 35146 5.9 2.4 0.1 C09SLm0017L21.1 83531 88038 (39636) C Gypsy00074 Gypsy (5650) 8441 3833 58 561 8.1 2.3 0.0 C09SLm0017L21.1 87963 88049 (39625) C Copia00138 Copia (0) 4039 3951 59 * 1835 25.7 1.5 1.3 C09SLm0017L21.1 88050 88581 (39093) + SHACOP18_I_MT Unknown 2359 2891 (1045) 60 35330 5.6 0.8 0.2 C09SLm0017L21.1 88872 93331 (34343) C Gypsy00074 Gypsy (5772) 8319 3831 61 1964 12.4 0.6 7.4 C09SLm0017L21.1 93399 93764 (33910) + Unknown00040 Unknown 4341 4681 (1) 62 * 2459 9.9 0.3 3.4 C09SLm0017L21.1 93466 93850 (33824) C Unknown00020 Unknown (4832) 373 1 63 * 3846 12.8 1.1 4.4 C09SLm0017L21.1 93517 94224 (33450) C Copia00110 Copia (11720) 2412 1728 64 553 30.1 3.5 4.3 C09SLm0017L21.1 94266 94640 (33034) + Copia00126 Copia 3302 3673 (346) 65 319 20.4 7.4 4.6 C09SLm0017L21.1 94666 94773 (32901) + Copia00089 Copia 3623 3733 (7723) 66 2257 9.3 1.3 0.0 C09SLm0017L21.1 96959 97268 (30406) + Unknown00034 Unknown 3704 4017 (5060) 67 829 9.2 1.7 0.0 C09SLm0017L21.1 97173 97292 (30382) + Copia00094 Copia 4469 4590 (1019) 68 * 2278 23.0 8.2 4.9 C09SLm0017L21.1 98306 99100 (28574) + Gypsy00007 Gypsy 5650 6470 (25) 69 * 4119 12.5 8.1 5.6 C09SLm0017L21.1 98532 99355 (28319) + Copia00205 Copia 4858 5702 (4554) 70 * 4631 20.0 6.8 7.3 C09SLm0017L21.1 98710 100269 (27405) C Copia00191 Copia (1012) 3714 2163 71 387 20.3 6.2 7.6 C09SLm0017L21.1 100084 100307 (27367) C Gypsy00041 Gypsy (211) 4670 4450 72 * 2055 11.4 1.3 0.0 C09SLm0017L21.1 100839 101136 (26538) + Unknown00034 Unknown 3717 4018 (5059) 73 1341 15.8 20.9 9.0 C09SLm0017L21.1 101316 101836 (25838) C Unknown00019 Unknown (13872) 761 179 74 * 5178 8.7 0.1 9.5 C09SLm0017L21.1 101379 102245 (25429) + Gypsy00043 Gypsy 528 1313 (12581) 75 918 15.0 0.0 0.7 C09SLm0017L21.1 102108 102261 (25413) C Unknown00019 Unknown (14449) 184 32 74 * 834 28.6 7.7 7.5 C09SLm0017L21.1 103047 104024 (23650) + Copia00089 Copia 522 1501 (9955) 76 1055 10.7 13.6 0.0 C09SLm0017L21.1 105217 105393 (22281) + HarbN_I Unknown 1 201 (4) 77 396 21.3 0.0 0.0 C09SLm0017L21.1 105557 105631 (22043) C Copia00172 Copia (2846) 3781 3707 78 1676 20.0 11.9 8.1 C09SLm0017L21.1 108440 109042 (18632) + Copia00205 Copia 5078 5703 (4553) 79 * 2003 20.9 6.8 11.5 C09SLm0017L21.1 108522 109269 (18405) C Copia00191 Copia (1176) 3550 2838 80 537 27.6 4.3 4.3 C09SLm0017L21.1 109064 109298 (18376) C Gypsy00161 Gypsy (6389) 677 443 81 * 487 26.3 4.7 2.3 C09SLm0017L21.1 110330 110543 (17131) + Gypsy00161 Gypsy 459 677 (6389) 82 * 1044 19.6 4.2 3.9 C09SLm0017L21.1 110364 110671 (17003) + Copia00191 Copia 2860 3168 (1558) 83 795 18.2 2.1 6.8 C09SLm0017L21.1 110706 110941 (16733) C Gypsy00007 Gypsy (621) 5874 5650 84 443 23.7 1.8 0.0 C09SLm0017L21.1 111232 111345 (16329) + Copia00151 Copia 10056 10171 (590) 85 292 28.7 0.0 0.0 C09SLm0017L21.1 115515 115601 (12073) + SC-5 Unknown 793 879 (2891) 86 1551 30.7 7.6 5.8 C09SLm0017L21.1 116581 117847 (9827) C Gypsy00038 Gypsy (1461) 6257 4968 87 284 26.2 9.5 2.0 C09SLm0017L21.1 118231 118378 (9296) + Unknown00043 Unknown 8399 8557 (2767) 88 753 32.8 3.4 2.4 C09SLm0017L21.1 119807 120215 (7459) + Unknown00043 Unknown 9977 10389 (935) 89 422 19.2 1.5 5.1 C09SLm0017L21.1 122836 122972 (4702) + Unknown00025 Unknown 274 405 (5903) 90 413 24.4 0.0 0.0 C09SLm0017L21.1 123138 123227 (4447) + TLP2 Unknown 10 99 (207) 91 243 15.2 3.7 0.0 C09SLm0017L21.1 123348 123406 (4268) + TLP1 Unknown 92 508 (154) 92 490 12.2 3.6 0.5 C09SLm0017L21.1 123411 123537 (4137) C GYCUME1_LTR Unknown (2161) 1593 364 93 476 7.3 0.9 2.1 C09SLm0017L21.1 126628 126734 (940) C HELITRON7_OS Unknown (7070) 1693 1119 94 415 12.4 1.0 0.0 C09SLm0017L21.1 126653 126749 (925) C Gypsy00042 Gypsy (1472) 6026 5929 95 *