SW perc perc perc query position in query matching repeat position in repeat score div. del. ins. sequence begin end (left) repeat class/family begin end (left) ID 263 32.9 8.9 1.3 C09SLm0143I09.1 7300 7456 (113271) + RTE1_MT Unknown 2254 2422 (733) 1 231 10.0 3.9 3.9 C09SLm0143I09.1 7674 7725 (113002) C Copia00151 Copia (1269) 9492 9441 2 480 23.2 1.6 2.3 C09SLm0143I09.1 7729 7856 (112871) C Copia00143 Copia (5087) 217 91 3 225 16.7 0.0 10.4 C09SLm0143I09.1 11148 11214 (109513) C Copia00074 Copia (1379) 3059 3000 4 378 14.5 0.0 0.0 C09SLm0143I09.1 12837 12898 (107829) C Unknown00034 Unknown (3871) 5206 5145 5 11620 8.1 4.3 0.8 C09SLm0143I09.1 13437 15131 (105596) + Gypsy00014 Gypsy 5168 6922 (0) 6 6560 8.8 1.2 0.8 C09SLm0143I09.1 14281 15239 (105488) C Gypsy00002 Gypsy (3) 6998 6036 7 * 7526 12.0 1.6 3.3 C09SLm0143I09.1 26484 27777 (92950) + Gypsy00062 Gypsy 135 1405 (5117) 8 27898 4.3 0.8 1.2 C09SLm0143I09.1 28889 33379 (87348) + Copia00195 Copia 1 4477 (0) 9 558 23.3 0.0 5.8 C09SLm0143I09.1 38563 38717 (82010) + Copia00151 Copia 8204 8349 (2412) 10 764 15.8 5.7 2.9 C09SLm0143I09.1 39517 39567 (81160) + Copia00110 Copia 13102 13203 (929) 11 834 2.9 0.0 1.0 C09SLm0143I09.1 39568 39671 (81056) + Gypsy00043 Gypsy 529 631 (13263) 12 787 23.1 7.4 11.3 C09SLm0143I09.1 39572 40138 (80589) C Unknown00019 Unknown (13935) 698 154 13 764 15.8 5.7 2.9 C09SLm0143I09.1 39672 39725 (81002) + Copia00110 Copia 13204 13311 (821) 11 * 1154 13.6 1.6 3.3 C09SLm0143I09.1 39907 40150 (80577) + Copia00110 Copia 13328 13567 (565) 11 712 22.8 4.2 2.5 C09SLm0143I09.1 39942 40180 (80547) + Gypsy00073 Gypsy 959 1201 (10883) 14 * 1211 13.7 7.1 2.1 C09SLm0143I09.1 40184 40421 (80306) + Gypsy00043 Gypsy 1066 1315 (12579) 15 4581 7.5 0.0 3.7 C09SLm0143I09.1 40802 41477 (79250) + Unknown00019 Unknown 48 698 (13935) 16 794 10.1 6.4 1.4 C09SLm0143I09.1 41352 41492 (79235) C Copia00110 Copia (835) 13297 13150 17 * 762 24.5 1.8 0.9 C09SLm0143I09.1 43192 43413 (77314) + TLP1 Unknown 387 610 (52) 18 553 16.3 1.1 0.0 C09SLm0143I09.1 43612 43703 (77024) C Copia00143 Copia (5103) 201 109 19 357 15.9 1.6 1.6 C09SLm0143I09.1 43838 43901 (76826) C Copia00143 Copia (5165) 139 76 19 345 14.1 0.0 8.2 C09SLm0143I09.1 46737 46821 (73906) C Copia00105 Copia (175) 8682 8605 20 320 19.1 0.0 2.9 C09SLm0143I09.1 46816 46885 (73842) C Copia00105 Copia (175) 8682 8615 20 * 389 28.9 1.6 0.8 C09SLm0143I09.1 53841 53989 (66738) C Copia00147 Copia (2870) 1917 1523 21 728 32.2 5.1 2.7 C09SLm0143I09.1 54470 54995 (65732) C Copia00061 Copia (3861) 733 195 22 * 804 30.6 6.4 2.9 C09SLm0143I09.1 54571 55024 (65703) + Copia00215 Copia 3948 4417 (135) 23 358 22.2 11.4 5.7 C09SLm0143I09.1 56336 56440 (64287) + SONATA1 Unknown 7 117 (126) 24 345 28.1 3.9 1.5 C09SLm0143I09.1 67578 67707 (53020) + Unknown00040 Unknown 4383 4515 (167) 25 623 19.4 1.7 13.1 C09SLm0143I09.1 74536 74825 (45902) C Copia00113 Copia (6912) 5494 5238 26 461 24.6 8.2 3.5 C09SLm0143I09.1 74798 75029 (45698) C Copia00039 Copia (4052) 498 256 27 468 19.8 0.7 11.0 C09SLm0143I09.1 74828 74963 (45764) + Copia00113 Copia 5318 5439 (6967) 28 422 22.3 4.4 4.4 C09SLm0143I09.1 75991 76126 (44601) C Unknown00043 Unknown (5882) 5442 5307 29 541 17.1 10.8 0.0 C09SLm0143I09.1 77809 77919 (42808) + HarbN_I Unknown 83 205 (0) 30 443 23.0 0.7 5.6 C09SLm0143I09.1 79791 79914 (40813) + TS Unknown 64 2052 (3) 31 333 22.4 8.2 0.0 C09SLm0143I09.1 81665 81749 (38978) + SOD_SINE Unknown 104 195 (50) 32 230 24.6 0.0 1.5 C09SLm0143I09.1 85688 85753 (34974) + Copia00151 Copia 9786 9850 (911) 33 225 20.0 3.6 5.4 C09SLm0143I09.1 107183 107203 (13524) + Unknown00049 Unknown 4579 4686 (4344) 34 690 2.2 0.0 0.0 C09SLm0143I09.1 107204 107292 (13435) C Copia00018 Copia (4297) 89 1 35 275 0.0 0.0 0.0 C09SLm0143I09.1 107293 107323 (13404) C Copia00018 Copia (4355) 31 1 35 502 4.0 1.3 0.0 C09SLm0143I09.1 107324 107398 (13329) + Unknown00049 Unknown 7220 7295 (1736) 36 * 35646 3.7 0.5 1.3 C09SLm0143I09.1 107349 111708 (9019) C Copia00170 Copia (0) 4326 1 37 1375 5.7 0.5 0.0 C09SLm0143I09.1 111709 111902 (8825) + Unknown00049 Unknown 4568 4762 (4269) 38 842 20.1 4.0 5.2 C09SLm0143I09.1 114075 114326 (6401) + Unknown00019 Unknown 48 296 (14337) 39 * 949 15.4 5.2 12.3 C09SLm0143I09.1 114158 114506 (6221) C Copia00110 Copia (561) 13571 13248 40