GeneSeqer. Version of March 12, 2006. Date run: Tue Aug 29 00:47:17 2006 (Bayesian) Splice site model (species): Arabidopsis thaliana Fast search parameters: MinMatchLen 16, MinQualityHSP 30, MinQualityCHAIN 50. Total number of ESTs: 175665 Total sequence length: 93213537 Minimum sequence length: 89 Maximum sequence length: 1082 Length distribution (number of sequences of specified length): < 100: 1 < 200: 2188 < 300: 8544 < 400: 20465 < 500: 39499 < 600: 49432 < 700: 32872 < 800: 19308 < 900: 3155 < 1000: 193 >=1000: 8 Input file : /tmp/bac-submission-temp-Nudfm/C10HBa0115K16/C10HBa0115K16.seq.screen ________________________________________________________________________________ Sequence 1: C10HBa0115K16.1, from 1 to 163868, both strands analyzed. ... started at: Tue Aug 29 01:11:55 2006 EST library file: /tmp/cxgn-bacpublish-resources-TKqzEo/sgn_ests; matching gDNA +strand ... ... found all matches, elapsed seconds = 8 ... matches indexed, elapsed seconds = 9 HitsTableSize = 107 EST library file: /tmp/cxgn-bacpublish-resources-TKqzEo/sgn_ests; matching gDNA -strand ... ... found all matches, elapsed seconds = 9 ... matches indexed, elapsed seconds = 9 HitsTableSize = 166 ******************************************************************************** EST sequence 42 -strand 695 n (File: SGN-E241731-) 1 ATTCTATTAT TAGATATATA TGAATATTGT GATTATGACT ATGGGTAACT AAGCTACATA 61 ACTATGGTTG TGGGAACCAT GGGTGAATAA TGAGGTAAAA TCTAACTAAA ATAACAATTC 121 TAGAATAGTG TCTTGCATGT ATTGATAATT GTTTTGCTTA GAAGTCTTTT TAACGGATGG 181 TCAACATTAG AACTCGCCTT AGTGCTACTT GCCGGACCAA GAAGGTAGAT AATAGCAAAA 241 GAATTATTAA CATAAATTTA GTGTATACTT TTTGATAGGC TAGTATTGAT TGGTACGAGG 301 TAATAACTTA GTCAAATATC GAATACAATG CTTAATATGA GGTAATGGTA AGGGTTTATA 361 TAGCAACACA CGTAGACGGA CCAAGGTGCG TAGTGATATT TTCTAGATGC AAGACCAAGG 421 ATATAGAAAT ACATAACTTA TTACTTTGTA TGCAAGATAC TAGGAAAGAA TTGTTATAGT 481 TAGAATTATT AAATTAGGAA CTTGTGGAGA ACACTTAAAC CCTAGTTAAT TATATTATTT 541 GATTAAATTC CAACATTTGA ATTTGTTAGT TGCCTACTTA AATTTAGCTA GCTATTTCCA 601 TTCATTTAGA ACTAAAACCC CCCTTTTTAT TGTCTTTGTT TTCTAAAGAA ATAATTGACT 661 AACTAATAGT AATAACAAAT TGAAAATAAC TCTGA Predicted gene structure (within gDNA segment 76005 to 70123): Exon 1 74696 74034 ( 663 n); cDNA 7 695 ( 689 n); score: 0.787 MATCH C10HBa0115K16.1- SGN-E241731- 0.787 663 0.954 C PGS_C10HBa0115K16.1-_SGN-E241731- (74696 74034) Alignment (genomic DNA sequence = upper lines): TTATATCATA TATATGAATA TTGTTATTAT GATTATGGGT AACTAAACTC CAGAACTAGG 74637 |||| ||| |||||||||| |||| ||||| || ||||||| |||||| || || ||||| | TTATTAGATA TATATGAATA TTGTGATTAT GACTATGGGT AACTAAGCTA CATAACTATG 66 ATTCTGGGAA ACATGGGTGA ATAATGAGGT AAAATGTAAC TAAAATAACA ATTCTAGAAT 74577 || |||||| ||||||||| |||||||||| ||||| |||| |||||||||| |||||||||| GTTGTGGGAA CCATGGGTGA ATAATGAGGT AAAATCTAAC TAAAATAACA ATTCTAGAAT 126 AGTGTCTTAC ATGTATTGAT AATTCTTTCA TTTAGAAGTC TTTTTAATGG ATGCACAACA 74517 |||||||| | |||||||||| |||| ||| ||||||||| ||||||| || ||| ||||| AGTGTCTTGC ATGTATTGAT AATTGTTTTG CTTAGAAGTC TTTTTAACGG ATGGTCAACA 186 TTAGAACTCT CCTTAATGCT ACTTGTCGGA CCAAGGAGGT AGATCATAGG AAAAGAACTA 74457 ||||||||| ||||| |||| ||||| |||| ||||| |||| |||| |||| ||||||| || TTAGAACTCG CCTTAGTGCT ACTTGCCGGA CCAAGAAGGT AGATAATAGC AAAAGAATTA 246 TCAATATATA TTTAGTGTAT ACTATCTAAA AGGCTAGTAT TGATTGGTAC GAGGTAGTAA 74397 | || ||| | |||||||||| ||| | | | |||||||||| |||||||||| |||||| ||| TTAACATAAA TTTAGTGTAT ACTTTTTGAT AGGCTAGTAT TGATTGGTAC GAGGTAATAA 306 CTTAGTCAAA TATCGAATAC AATGATTAAT ATGAGGTAAA GGTAAGAG-- --T-TAG--- 74345 |||||||||| |||||||||| |||| ||||| ||||||||| |||||| | | ||| CTTAGTCAAA TATCGAATAC AATGCTTAAT ATGAGGTAAT GGTAAGGGTT TATATAGCAA 366 --TA--TTG- CGG----A-G T--G-A---A -ATTTTCTAG ATGCCGGACC AAGGATTTAG 74302 | | | ||| | | | | | | ||||||||| |||| |||| |||||| ||| CACACGTAGA CGGACCAAGG TGCGTAGTGA TATTTTCTAG ATGCAAGACC AAGGATATAG 426 AAATACATAA CTTATCACTT TGAATGCAAG ATAATAGGAA AGAATTGTTA TAGTTAGAAT 74242 |||||||||| ||||| |||| || ||||||| ||| |||||| |||||||||| |||||||||| AAATACATAA CTTATTACTT TGTATGCAAG ATACTAGGAA AGAATTGTTA TAGTTAGAAT 486 TATCTAGTTA GGAACTTGTG GGGAACACTT AAACCCTAGT TACTTTTATT AATTGATTAA 74182 ||| | ||| |||||||||| | |||||||| |||||||||| || || |||| | |||||||| TATTAAATTA GGAACTTGTG GAGAACACTT AAACCCTAGT TAATTATATT ATTTGATTAA 546 ACTACAACAT TTGAATTTGT TAGTTGTTTA CTTTAATTTA GCTAGTTATT TTCATTCATT 74122 | | |||||| |||||||||| |||||| || ||| |||||| ||||| |||| | |||||||| ATTCCAACAT TTGAATTTGT TAGTTGCCTA CTTAAATTTA GCTAGCTATT TCCATTCATT 606 TAGAAATCAA AACCCCCCGT TTATTGTCTT T-TTTTCTAA GGAAATAATT GACTTAATAA 74063 ||||| | || | ||||| | |||||||||| | |||||||| ||||||||| |||| | ||| TAGAACTAAA ACCCCCCTTT TTATTGTCTT TGTTTTCTAA AGAAATAATT GACTAACTAA 666 TAATAATAAT AAATTAAAGT TAAGTTTGA 74034 || |||||| ||||| || ||| | ||| TAGTAATAAC AAATTGAAAA TAACTCTGA 695 hqPGS_C10HBa0115K16.1-_SGN-E241731- (74696 74034) ******************************************************************************** EST sequence 45 -strand 713 n (File: SGN-E395433-) 1 CCACATCAAC ATAGTTGAAG TAAGACATAA CGGACCCCAT GACAGTTCAT CGTAATCACG 61 ATGATCCGTC ACCTGGTCCA TCGTGTTTCA CTATTACTGC AGAAAAGTCA TTACAGCTTA 121 GCTCTAATAT TTATTTTGTG TTTTTTTTAT CATCGTGTTT GCTCCTTCTC GTACTAATAT 181 TGATTTTTTA TAGGTAGTAT CTCTAATGGC ACCAAAACAA AATTGAGTTT ATGCACGTAG 241 GCGTTCAAAG TCTATCGCCC CGTCCGCCCG ACTGGTTATA GGCTTTGATG ATGAGCATGA 301 CCCCAAGTAC GTGCCCCCAG GCTATTCCAC TCCATCACGA TCTGCACGTG CTACTAGAGC 361 TATGCCCAAA AAGGTGGCGT CCAACGTAGT CACTTCCTAC AAGTCTGATG AGGAGCACAC 421 ACTAACCGGC ACACCTTCTG GGTCAGCTAC ACATGAATAA GGAGCGTCTG GCTCCTTAGG 481 AGTTTTGTGA TCAGAGGAAG CCTCCGGGTC CGCTGAAGTC CCTGCCCCGG CCACATCTGC 541 ACAGTCTTTC TCGTTTGATG AGGCTGACAG TCTTGTTCCA CTCCAGGCTC AGTGACTAAT 601 GCTCTCACCT CGATTGCCAA CCAGCGCAAC TGATAGTGTG TCGACGAGCA ATATCAAGTG 661 TATTTCGATG CTCAGTTTCT AAATGATAAA GGATTCATGA CAAAGACCCG TAC Predicted gene structure (within gDNA segment 77606 to 75684): Exon 1 76996 76284 ( 713 n); cDNA 1 713 ( 713 n); score: 1.000 MATCH C10HBa0115K16.1- SGN-E395433- 1.000 713 1.000 C PGS_C10HBa0115K16.1-_SGN-E395433- (76996 76284) Alignment (genomic DNA sequence = upper lines): CCACATCAAC ATAGTTGAAG TAAGACATAA CGGACCCCAT GACAGTTCAT CGTAATCACG 76937 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCACATCAAC ATAGTTGAAG TAAGACATAA CGGACCCCAT GACAGTTCAT CGTAATCACG 60 ATGATCCGTC ACCTGGTCCA TCGTGTTTCA CTATTACTGC AGAAAAGTCA TTACAGCTTA 76877 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATGATCCGTC ACCTGGTCCA TCGTGTTTCA CTATTACTGC AGAAAAGTCA TTACAGCTTA 120 GCTCTAATAT TTATTTTGTG TTTTTTTTAT CATCGTGTTT GCTCCTTCTC GTACTAATAT 76817 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCTCTAATAT TTATTTTGTG TTTTTTTTAT CATCGTGTTT GCTCCTTCTC GTACTAATAT 180 TGATTTTTTA TAGGTAGTAT CTCTAATGGC ACCAAAACAA AATTGAGTTT ATGCACGTAG 76757 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGATTTTTTA TAGGTAGTAT CTCTAATGGC ACCAAAACAA AATTGAGTTT ATGCACGTAG 240 GCGTTCAAAG TCTATCGCCC CGTCCGCCCG ACTGGTTATA GGCTTTGATG ATGAGCATGA 76697 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCGTTCAAAG TCTATCGCCC CGTCCGCCCG ACTGGTTATA GGCTTTGATG ATGAGCATGA 300 CCCCAAGTAC GTGCCCCCAG GCTATTCCAC TCCATCACGA TCTGCACGTG CTACTAGAGC 76637 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCCCAAGTAC GTGCCCCCAG GCTATTCCAC TCCATCACGA TCTGCACGTG CTACTAGAGC 360 TATGCCCAAA AAGGTGGCGT CCAACGTAGT CACTTCCTAC AAGTCTGATG AGGAGCACAC 76577 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TATGCCCAAA AAGGTGGCGT CCAACGTAGT CACTTCCTAC AAGTCTGATG AGGAGCACAC 420 ACTAACCGGC ACACCTTCTG GGTCAGCTAC ACATGAATAA GGAGCGTCTG GCTCCTTAGG 76517 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACTAACCGGC ACACCTTCTG GGTCAGCTAC ACATGAATAA GGAGCGTCTG GCTCCTTAGG 480 AGTTTTGTGA TCAGAGGAAG CCTCCGGGTC CGCTGAAGTC CCTGCCCCGG CCACATCTGC 76457 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGTTTTGTGA TCAGAGGAAG CCTCCGGGTC CGCTGAAGTC CCTGCCCCGG CCACATCTGC 540 ACAGTCTTTC TCGTTTGATG AGGCTGACAG TCTTGTTCCA CTCCAGGCTC AGTGACTAAT 76397 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACAGTCTTTC TCGTTTGATG AGGCTGACAG TCTTGTTCCA CTCCAGGCTC AGTGACTAAT 600 GCTCTCACCT CGATTGCCAA CCAGCGCAAC TGATAGTGTG TCGACGAGCA ATATCAAGTG 76337 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCTCTCACCT CGATTGCCAA CCAGCGCAAC TGATAGTGTG TCGACGAGCA ATATCAAGTG 660 TATTTCGATG CTCAGTTTCT AAATGATAAA GGATTCATGA CAAAGACCCG TAC 76284 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||| TATTTCGATG CTCAGTTTCT AAATGATAAA GGATTCATGA CAAAGACCCG TAC 713 hqPGS_C10HBa0115K16.1-_SGN-E395433- (76996 76284) ******************************************************************************** EST sequence 200 +strand 696 n (File: SGN-E395434+) 1 ACTGAGCAAG AACTCCTTGC AGTAGTCTTT GCTTTTGAAA AATTTTGCTC TGATTTGCTA 61 GGTACTAGAG TTATAGTTCA TACTGACCAT TCAGCATTGA GATATTTGAT GGAAAATAAG 121 GATGTGAAAC CGAGGTTAAT TCGTTAGGTA TTACTGCTAC ACAAATTTGA CTTTGAAGTG 181 AGGGATAGAA AAGGAATCAA AAATCAAGTT GCCAATCACT CGTCCTAACT AGAAGATGAA 241 TCTATGAGAG ATTTAGGGTA TAAGTCTGAG CATGTATTGG CTGCCTCACA AGACTTTATT 301 ACATGGTTCG CAGATTTCGA GAACTATCTG GCTAGTGATA TTATTCCATC GGACTTGTCC 361 TTTCATCAAA GAAAAAAGTT CATGCACGAT GTGAAGTTGT TCTATTGGGA TGAACCATAT 421 TTTTACAGTA GTTGTGCCAT AGGGCTTATT CAGTGTTGTG TGCCAGAATG TGAGATGTTG 481 AGTGTTTTAG AGGCTTGCCA TTCCTCACCC ATTGGTGGAC ATCATAGTGG TATCCGAACC 541 ACTCATAAGA TATTACAATG TGGTTACTAT TGCCCCACTC TTCATCAATA TGCTCCTCAT 601 TTTGTTAAAG CATGTGATAG ATGCCAAAGA GATGAAGGAA TTTCAAGAAA GCAAGAGCTC 661 CCTCTAAACC CCATTCTTGT GATTGAGTTA TTTGAT Predicted gene structure (within gDNA segment 80712 to 78807): Exon 1 80112 79417 ( 696 n); cDNA 1 696 ( 696 n); score: 0.999 MATCH C10HBa0115K16.1- SGN-E395434+ 0.999 696 1.000 C PGS_C10HBa0115K16.1-_SGN-E395434+ (80112 79417) Alignment (genomic DNA sequence = upper lines): ACTGAGCAAG AACTCCTTGC AGTAGTCTTT GCTTTTGAAA AATTTTGCTC TGATTTGCTA 80053 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACTGAGCAAG AACTCCTTGC AGTAGTCTTT GCTTTTGAAA AATTTTGCTC TGATTTGCTA 60 GGTACTAGAG TTATAGTTCA TACTGACCAT TCAGCATTGA GATATTTGAT GGAAAATAAG 79993 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGTACTAGAG TTATAGTTCA TACTGACCAT TCAGCATTGA GATATTTGAT GGAAAATAAG 120 GATGTGAAAC CGAGGTTAAT TCGTTAGGTA TTACTGCTAC ACAAATTTGA CTTTGAAGTG 79933 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATGTGAAAC CGAGGTTAAT TCGTTAGGTA TTACTGCTAC ACAAATTTGA CTTTGAAGTG 180 AGGGATAGAA AAGGAATCAA AAATCAAGTT GCCAATCACT CGTCCTAACT AGAAGATGAA 79873 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGGGATAGAA AAGGAATCAA AAATCAAGTT GCCAATCACT CGTCCTAACT AGAAGATGAA 240 TCTATGAGAG ATTTAGGGTA TAAGTCTGAG CATGTATTGG CTGCCTCACA AGACTTTATT 79813 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCTATGAGAG ATTTAGGGTA TAAGTCTGAG CATGTATTGG CTGCCTCACA AGACTTTATT 300 ACATGGTTCG CAGATTTCGA GAACTATCTG GCTAGTGATA TTATTCCATC GGACTTGTCC 79753 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACATGGTTCG CAGATTTCGA GAACTATCTG GCTAGTGATA TTATTCCATC GGACTTGTCC 360 TTTCATCAAA GAAAAAAGTT CATGCACGAT GTGAAGTTGT TCTATTGGGA TGAACCATAT 79693 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTCATCAAA GAAAAAAGTT CATGCACGAT GTGAAGTTGT TCTATTGGGA TGAACCATAT 420 TTTTACAGTA GTTGTGCCAT AGGGCTTATT CAGTGTTGTG TGCCAGAATG TGAGATGTTG 79633 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTTACAGTA GTTGTGCCAT AGGGCTTATT CAGTGTTGTG TGCCAGAATG TGAGATGTTG 480 AGTGTTTTAG AGGCTTGCCA TTCCTCACCC ATTGGTGGAC ATCATAGTGG TATCCGAACC 79573 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGTGTTTTAG AGGCTTGCCA TTCCTCACCC ATTGGTGGAC ATCATAGTGG TATCCGAACC 540 ACTCATAAGA TATTACAATG TGGTTACTAT TGCCCAACTC TTCATCAATA TGCTCCTCAT 79513 |||||||||| |||||||||| |||||||||| ||||| |||| |||||||||| |||||||||| ACTCATAAGA TATTACAATG TGGTTACTAT TGCCCCACTC TTCATCAATA TGCTCCTCAT 600 TTTGTTAAAG CATGTGATAG ATGCCAAAGA GATGAAGGAA TTTCAAGAAA GCAAGAGCTC 79453 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTGTTAAAG CATGTGATAG ATGCCAAAGA GATGAAGGAA TTTCAAGAAA GCAAGAGCTC 660 CCTCTAAACC CCATTCTTGT GATTGAGTTA TTTGAT 79417 |||||||||| |||||||||| |||||||||| |||||| CCTCTAAACC CCATTCTTGT GATTGAGTTA TTTGAT 696 hqPGS_C10HBa0115K16.1-_SGN-E395434+ (80112 79417) ******************************************************************************** EST sequence 189 +strand 487 n (File: SGN-E205922+) 1 CTGAGCAAGA ACTCCTTGCA GTAGTCTTTG CTTTTGAAAG ATTTTGCTCT GATTTGCTAG 61 GTACTATAGT TATAGTTCAT ACTGACCATT CAGCATTGAG ATATTTGATG GAAAATAAGG 121 ATGTGAAACC GAGGTTAATT CGTTAGGTAT TACTGCTACA CAAATTTGAC TTTGAAGTGA 181 GGGATAGAAA AGGAATCAAA AATCAAGTTG CCAATCACTC GTCCTAACTA GAAGATGAAT 241 CTATGAGAGA TTTAGGGTAT AAGTCTGAGC ATGTATTGGC TGCCTCACAA GACTTTATTA 301 CATGGTTCGC AGATTTCGAG AACTATCTGG CTAGTGATAT TATTCCATCG GACTTGTCCT 361 TTCATCAAAG AAAAAAGTTC ATGCACGATG TGAAGTTGTT CTATTGGGAT GAACCATATT 421 TTTACAGTAG TTGTGCCATA GGGCTTATTC AGTGTTGTGT GCCAGAATGT GAGATGTTGA 481 GTGTTTT Predicted gene structure (within gDNA segment 80711 to 79015): Exon 1 80111 79625 ( 487 n); cDNA 1 487 ( 487 n); score: 0.996 MATCH C10HBa0115K16.1- SGN-E205922+ 0.996 487 1.000 C PGS_C10HBa0115K16.1-_SGN-E205922+ (80111 79625) Alignment (genomic DNA sequence = upper lines): CTGAGCAAGA ACTCCTTGCA GTAGTCTTTG CTTTTGAAAA ATTTTGCTCT GATTTGCTAG 80052 |||||||||| |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| CTGAGCAAGA ACTCCTTGCA GTAGTCTTTG CTTTTGAAAG ATTTTGCTCT GATTTGCTAG 60 GTACTAGAGT TATAGTTCAT ACTGACCATT CAGCATTGAG ATATTTGATG GAAAATAAGG 79992 |||||| ||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTACTATAGT TATAGTTCAT ACTGACCATT CAGCATTGAG ATATTTGATG GAAAATAAGG 120 ATGTGAAACC GAGGTTAATT CGTTAGGTAT TACTGCTACA CAAATTTGAC TTTGAAGTGA 79932 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATGTGAAACC GAGGTTAATT CGTTAGGTAT TACTGCTACA CAAATTTGAC TTTGAAGTGA 180 GGGATAGAAA AGGAATCAAA AATCAAGTTG CCAATCACTC GTCCTAACTA GAAGATGAAT 79872 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGGATAGAAA AGGAATCAAA AATCAAGTTG CCAATCACTC GTCCTAACTA GAAGATGAAT 240 CTATGAGAGA TTTAGGGTAT AAGTCTGAGC ATGTATTGGC TGCCTCACAA GACTTTATTA 79812 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTATGAGAGA TTTAGGGTAT AAGTCTGAGC ATGTATTGGC TGCCTCACAA GACTTTATTA 300 CATGGTTCGC AGATTTCGAG AACTATCTGG CTAGTGATAT TATTCCATCG GACTTGTCCT 79752 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATGGTTCGC AGATTTCGAG AACTATCTGG CTAGTGATAT TATTCCATCG GACTTGTCCT 360 TTCATCAAAG AAAAAAGTTC ATGCACGATG TGAAGTTGTT CTATTGGGAT GAACCATATT 79692 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTCATCAAAG AAAAAAGTTC ATGCACGATG TGAAGTTGTT CTATTGGGAT GAACCATATT 420 TTTACAGTAG TTGTGCCATA GGGCTTATTC AGTGTTGTGT GCCAGAATGT GAGATGTTGA 79632 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTACAGTAG TTGTGCCATA GGGCTTATTC AGTGTTGTGT GCCAGAATGT GAGATGTTGA 480 GTGTTTT 79625 ||||||| GTGTTTT 487 hqPGS_C10HBa0115K16.1-_SGN-E205922+ (80111 79625) ******************************************************************************** EST sequence 80 -strand 719 n (File: SGN-E356787-) 1 TTTTCTGCGG TTGGTGATTC ATTCGAGCGG TGTTTGAACA ATTTACCTGA GGTCCTTAAG 61 AGATGTGAAG ACTGTAATTT AGTACTAAAT TGGGAAAAAT GCCATTTCAT GGTGAAAGAA 121 GGTATTGTTT TGGGTCATCG CATTTCAGAA AAGTGCATAG AGGTTGATCG AGTTAAAGTC 181 GAGGTAATAG AGAGACTTCC CCCACCTATC TCTGTAAAAG GTGTGATAAG CTTTCTTGGG 241 CATGTAGGTT TTTACCGAAG ATTCATCAAA GATTGCACAT CCGTTGTGCA AACTGCTGGA 301 GAAAGATTGT AAATTTTGTT TTGATGAATC GTGTCTTAAA GCATTTGACG ATCTAAAAGA 361 AAAATTGGTG TCTACACCTA TCATTATTTC TCTGGATTGG AATAGTCCAT TTGAGGTGAT 421 GTGCGATGCT AGTGGGGTTG CTCTTGGTGT AGTATTGGGA CAAATAAAGA ACAAAATCTT 481 CACCCCATTT ACTATGCTAG TAAAGCCCTA AATGAAGCTC ACAAGAACTA CACAGTGACT 541 GAGCAAGAAC TCCTTACATT AGTCTTTCCT TTCAAAAAAT TTTGCTCCTA TTTGCTAGGT 601 ACTAGAGTTA TAGTGCATAC TGACCATTCA ACATTGAGAT ATTTGATGGC AAAGAAGGAT 661 GCAAAACCGA GGTTGATTGG TTGGGTATTA CTGTTACAAG AATTTGACTA TGAAGTAAA Predicted gene structure (within gDNA segment 81947 to 78701): Exon 1 80662 79934 ( 729 n); cDNA 1 716 ( 716 n); score: 0.897 MATCH C10HBa0115K16.1- SGN-E356787- 0.897 729 1.014 C PGS_C10HBa0115K16.1-_SGN-E356787- (80662 79934) Alignment (genomic DNA sequence = upper lines): TTTTCTATGG TTGGTGAATC ATTCGAGCGT TGTTTGAACA ATTTATCTGA GGTCCTTAAG 80603 |||||| || ||||||| || ||||||||| |||||||||| ||||| |||| |||||||||| TTTTCTGCGG TTGGTGATTC ATTCGAGCGG TGTTTGAACA ATTTACCTGA GGTCCTTAAG 60 ATATGTGAAA ACTGCAATTT AGTACTAAAT TAAAAAAAAA TACCACTTTA TGGTGAAAGA 80543 | ||||||| |||| ||||| |||||||||| | | |||| | ||| || | |||||||||| AGATGTGAAG ACTGTAATTT AGTACTAAAT TGGGA-AAAA TGCCATTTCA TGGTGAAAGA 119 AGGTATTGTT TTAGGTCATT GCATTTCAGA AAAGGGCATA GAGGTTGATC AAGATAAAGG 80483 |||||||||| || |||||| |||||||||| |||| ||||| |||||||||| || ||||| AGGTATTGTT TTGGGTCATC GCATTTCAGA AAAGTGCATA GAGGTTGATC GAGTTAAAGT 179 CGAGGTAATA GAGAGACTTC CCCCACCTAT ATCTGTAAAG GGTGTGAGAA GCTTTCTTGG 80423 |||||||||| |||||||||| |||||||||| |||||||| ||||||| || |||||||||| CGAGGTAATA GAGAGACTTC CCCCACCTAT CTCTGTAAAA GGTGTGATAA GCTTTCTTGG 239 GCATGTAGGT TTTTACCAGA GATTCTTCAA AGATTTTTCA AAAATTGCAC ATTCGTTGTG 80363 |||||||||| ||||||| | | ||||| ||| || ||||||| || ||||||| GCATGTAGGT TTTTACC--- G--------A AGATTCATCA AAGATTGCAC ATCCGTTGTG 288 CAAACTGCTG GAGAAAGATT GTAAATTTTA TTTTGATGAA TCCTGTCTTA AAGCATTTGG 80303 |||||||||| |||||||||| ||||||||| |||||||||| || ||||||| ||||||||| CAAACTGCTG GAGAAAGATT GTAAATTTTG TTTTGATGAA TCGTGTCTTA AAGCATTTGA 348 CGAGCTAAAA GAAAAATTGA TGTCTGCACC TATCATTATT TCTCTAGATT GGAACAGTCT 80243 ||| |||||| ||||||||| ||||| |||| |||||||||| ||||| |||| |||| |||| CGATCTAAAA GAAAAATTGG TGTCTACACC TATCATTATT TCTCTGGATT GGAATAGTCC 408 ATTCGAGGTG ATGTGCGATG CTAGTGGGGT TGCTCTTGGT GTAGTATTGG GACAAAGAAA 80183 ||| |||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||| ||| ATTTGAGGTG ATGTGCGATG CTAGTGGGGT TGCTCTTGGT GTAGTATTGG GACAAATAAA 468 GAACAATATC CTTCACCCCA TTTACTATGC TAGTAAAGAC CTAAATGAAG CTCAGAAGAA 80123 |||||| || |||||||||| |||||||||| |||||||| | |||||||||| |||| ||||| GAACAAAAT- CTTCACCCCA TTTACTATGC TAGTAAAGCC CTAAATGAAG CTCACAAGAA 527 TTACACAGTG ACTGAGCAAG AACTCCTTGC AGTAGTCTTT GCTTTTGAAA AATTTTGCTC 80063 ||||||||| |||||||||| |||||||| | | |||||||| |||| ||| |||||||||| CTACACAGTG ACTGAGCAAG AACTCCTTAC ATTAGTCTTT CCTTTCAAAA AATTTTGCTC 587 TGATTTGCTA GGTACTAGAG TTATAGTTCA TACTGACCAT TCAGCATTGA GATATTTGAT 80003 |||||||| |||||||||| ||||||| || |||||||||| ||| |||||| |||||||||| CTATTTGCTA GGTACTAGAG TTATAGTGCA TACTGACCAT TCAACATTGA GATATTTGAT 647 GGAAAATAAG GATGTGAAAC CGAGGTTAAT TCGTTAGGTA TTACTGCTAC ACAAATTTGA 79943 || ||| ||| |||| |||| ||||||| || | ||| |||| |||||| ||| | ||||||| GGCAAAGAAG GATGCAAAAC CGAGGTTGAT TGGTTGGGTA TTACTGTTAC AAGAATTTGA 707 CTTTGAAGT 79934 || |||||| CTATGAAGT 716 hqPGS_C10HBa0115K16.1-_SGN-E356787- (80662 79934) ******************************************************************************** EST sequence 10 -strand 734 n (File: SGN-E577717-) 1 GAAGAATGCC ATTTAGGTTG TGCAATGCAC CCGCAACCTT TCAGAGATAT ATGATGTCAA 61 TATTTTCTGA CATGGTGGAG GATACTATAG AGGTTTTTAT GGATGATTTT TCTGTGGTTG 121 GTGATTCAAT TGAGCGATGC TTGACCAATT AATCTGAGGT TCTTAAGAGA TGTGAAGACT 181 GCAATCTGGT ACTAAACTGG GAAAAGTGTC ATTTCATGGT AAAAAAAGGT ATTGTGTTGG 241 GTCATCGCAT TTCAGAAAAG GGAATAGAGG TTGATCGAGC TAAAGTTGAG GTAATAGAGA 301 GACTTCCCCC ACCGATCTCT ATGAAAGGTG TGAGAAGCTT TCTTGGGCAT GCAGGTTTTT 361 ATCGGAGATT CATCAAAGAC TTTTCAAAGA TTGCACACCC ATTGTGCAAA TTACTGAAGA 421 AAGAATGTAA ATTTTGTTTT GATGAGTCCT GTCTTAAAGC ATTCAGTGAG CTAAAAGAGA 481 AGTTAGTGTC TGCACCTATC ATTATTTCTC CGGATTGGAA AAGTCCATTT GAGGTAATGT 541 GCGATGCTAG TGGGGTGGCT CTTGGTGTAG TATTGGGACA GAGAAGAAAC AAAATCCTTC 601 ACCCAATTTA CTATGCTAGT AAAGCCCTAA ATGAAGCCCA GAAGAACTAC ACAGTGACTG 661 AGCATGAACT CCTCGCAGTA GTCTTTGCTT TTGAGATATT TTGCTCCTAT TTGCTAGGTA 721 CTAGAGTCAT AGAG Predicted gene structure (within gDNA segment 83961 to 79372): Exon 1 80767 80037 ( 731 n); cDNA 3 732 ( 730 n); score: 0.869 MATCH C10HBa0115K16.1- SGN-E577717- 0.869 731 0.996 C PGS_C10HBa0115K16.1-_SGN-E577717- (80767 80037) Alignment (genomic DNA sequence = upper lines): AGAATGTCGT TTGGGTCGTG CAATGCACCG GCCACATTTC AGAGATGTAT GATGTCGATA 80708 |||||| | | || ||| ||| ||||||||| || || |||| |||||| ||| |||||| ||| AGAATGCCAT TTAGGTTGTG CAATGCACCC GCAACCTTTC AGAGATATAT GATGTCAATA 62 TTGTCCGACA TGGTGAAAGA TACTATAGAT GTTTTTATGG ATGATTTTTC TATGGTTGGT 80648 || || |||| ||||| | || ||||||||| |||||||||| |||||||||| | |||||||| TTTTCTGACA TGGTGGAGGA TACTATAGAG GTTTTTATGG ATGATTTTTC TGTGGTTGGT 122 GAATCATTCG AGCGTTGTTT GAACAATTTA TCTGAGGTCC TTAAGATATG TGAAAACTGC 80588 || ||| | | |||| || || || ||||| | |||||||| | |||||| ||| |||| ||||| GATTCAATTG AGCGATGCTT GACCAATTAA TCTGAGGTTC TTAAGAGATG TGAAGACTGC 182 AATTTAGTAC TAAATTAAAA AAAAATACCA CTTTATGGTG AAAGAAGGTA TTGTTTTAGG 80528 ||| | |||| |||| | |||| | || || ||||| ||| |||||| |||| || || AATCTGGTAC TAAACT-GGG AAAAGTGTCA TTTCATGGTA AAAAAAGGTA TTGTGTTGGG 241 TCATTGCATT TCAGAAAAGG GCATAGAGGT TGATCAAGAT AAAGGCGAGG TAATAGAGAG 80468 |||| ||||| |||||||||| | |||||||| ||||| || | |||| |||| |||||||||| TCATCGCATT TCAGAAAAGG GAATAGAGGT TGATCGAGCT AAAGTTGAGG TAATAGAGAG 301 ACTTCCCCCA CCTATATCTG TAAAGGGTGT GAGAAGCTTT CTTGGGCATG TAGGTTTTTA 80408 |||||||||| || || ||| | || ||||| |||||||||| |||||||||| ||||||||| ACTTCCCCCA CCGATCTCTA TGAAAGGTGT GAGAAGCTTT CTTGGGCATG CAGGTTTTTA 361 CCAGAGATTC TTCAAAGATT TTTCAAAAAT TGCACATTCG TTGTGCAAAC TGCTGGAGAA 80348 | ||||||| ||||||| | ||||||| || |||||| | ||||||||| | ||| |||| TCGGAGATTC ATCAAAGACT TTTCAAAGAT TGCACACCCA TTGTGCAAAT TACTGAAGAA 421 AGATTGTAAA TTTTATTTTG ATGAATCCTG TCTTAAAGCA TTTGGCGAGC TAAAAGAAAA 80288 ||| |||||| |||| ||||| |||| ||||| |||||||||| || | |||| ||||||| || AGAATGTAAA TTTTGTTTTG ATGAGTCCTG TCTTAAAGCA TTCAGTGAGC TAAAAGAGAA 481 ATTGATGTCT GCACCTATCA TTATTTCTCT AGATTGGAAC AGTCTATTCG AGGTGATGTG 80228 || ||||| |||||||||| ||||||||| |||||||| |||| ||| | |||| ||||| GTTAGTGTCT GCACCTATCA TTATTTCTCC GGATTGGAAA AGTCCATTTG AGGTAATGTG 541 CGATGCTAGT GGGGTTGCTC TTGGTGTAGT ATTGGGACAA AGAAAGAACA ATATCCTTCA 80168 |||||||||| ||||| |||| |||||||||| ||||||||| |||| |||| | |||||||| CGATGCTAGT GGGGTGGCTC TTGGTGTAGT ATTGGGACAG AGAAGAAACA AAATCCTTCA 601 CCCCATTTAC TATGCTAGTA AAGACCTAAA TGAAGCTCAG AAGAATTACA CAGTGACTGA 80108 ||| |||||| |||||||||| ||| |||||| |||||| ||| ||||| |||| |||||||||| CCCAATTTAC TATGCTAGTA AAGCCCTAAA TGAAGCCCAG AAGAACTACA CAGTGACTGA 661 GCAAGAACTC CTTGCAGTAG TCTTTGCTTT TGAAAAATTT TGCTCTGATT TGCTAGGTAC 80048 ||| |||||| || ||||||| |||||||||| ||| | |||| ||||| ||| |||||||||| GCATGAACTC CTCGCAGTAG TCTTTGCTTT TGAGATATTT TGCTCCTATT TGCTAGGTAC 721 TAGAGTTATA G 80037 |||||| ||| | TAGAGTCATA G 732 hqPGS_C10HBa0115K16.1-_SGN-E577717- (80767 80037) ******************************************************************************** EST sequence 41 +strand 695 n (File: SGN-E241731+) 1 TCAGAGTTAT TTTCAATTTG TTATTACTAT TAGTTAGTCA ATTATTTCTT TAGAAAACAA 61 AGACAATAAA AAGGGGGGTT TTAGTTCTAA ATGAATGGAA ATAGCTAGCT AAATTTAAGT 121 AGGCAACTAA CAAATTCAAA TGTTGGAATT TAATCAAATA ATATAATTAA CTAGGGTTTA 181 AGTGTTCTCC ACAAGTTCCT AATTTAATAA TTCTAACTAT AACAATTCTT TCCTAGTATC 241 TTGCATACAA AGTAATAAGT TATGTATTTC TATATCCTTG GTCTTGCATC TAGAAAATAT 301 CACTACGCAC CTTGGTCCGT CTACGTGTGT TGCTATATAA ACCCTTACCA TTACCTCATA 361 TTAAGCATTG TATTCGATAT TTGACTAAGT TATTACCTCG TACCAATCAA TACTAGCCTA 421 TCAAAAAGTA TACACTAAAT TTATGTTAAT AATTCTTTTG CTATTATCTA CCTTCTTGGT 481 CCGGCAAGTA GCACTAAGGC GAGTTCTAAT GTTGACCATC CGTTAAAAAG ACTTCTAAGC 541 AAAACAATTA TCAATACATG CAAGACACTA TTCTAGAATT GTTATTTTAG TTAGATTTTA 601 CCTCATTATT CACCCATGGT TCCCACAACC ATAGTTATGT AGCTTAGTTA CCCATAGTCA 661 TAATCACAAT ATTCATATAT ATCTAATAAT AGAAT Predicted gene structure (within gDNA segment 80078 to 86053): Exon 1 84174 84856 ( 683 n); cDNA 1 695 ( 695 n); score: 0.832 MATCH C10HBa0115K16.1+ SGN-E241731+ 0.832 683 0.983 C PGS_C10HBa0115K16.1+_SGN-E241731+ (84174 84856) Alignment (genomic DNA sequence = upper lines): TCAGACTTAA CTTTAA--T- CTATTACTAT TATTTAGTCA ATTATTTCCA TAGAAAACAA 84230 ||||| ||| || || | ||||||||| || ||||||| |||||||| |||||||||| TCAGAGTTAT TTTCAATTTG TTATTACTAT TAGTTAGTCA ATTATTTCTT TAGAAAACAA 60 AGACAATAAA AGGGAGGGTT TTGTTTCTAA ATGAATGAAA ATAACTAAGT AAAGTAAAGT 84290 |||||||||| | || ||||| || |||||| ||||||| || ||| ||| | ||| | |||| AGACAATAAA AAGGGGGGTT TTAGTTCTAA ATGAATGGAA ATAGCTAGCT AAATTTAAGT 120 AAAAAACTTA CAGATTTAAA TGTTGGAGTT TAATCAATTG ATAAAAGTAA CTAGGGTTAA 84350 | |||| | || ||| ||| ||||||| || ||||||| | ||| || ||| |||||||| | AGGCAACTAA CAAATTCAAA TGTTGGAATT TAATCAAATA ATATAATTAA CTAGGGTTTA 180 AGTGTTTCCC ACAAGTTCCT AACTTGATAA TTCTAACTAT AACAACTCTT TCCTAGTACC 84410 |||||| || |||||||||| || || |||| |||||||||| ||||| |||| |||||||| | AGTGTTCTCC ACAAGTTCCT AATTTAATAA TTCTAACTAT AACAATTCTT TCCTAGTATC 240 TTGCATGCAA AATGATAAGT TATGGATTTC TAAATCCTTA GTCTAGCATC TAGAAAATTC 84470 |||||| ||| | | |||||| |||| ||||| || |||||| |||| ||||| |||||||| TTGCATACAA AGTAATAAGT TATGTATTTC TATATCCTTG GTCTTGCATC TAGAAAATAT 300 CACTCCGC-C CTTGGTACGT CTACGTATGT TGCTATACTA ACCCTTACCT TTACCTCATA 84529 |||| ||| | |||||| ||| |||||| ||| ||||||| | ||||||||| |||||||||| CACTACGCAC CTTGGTCCGT CTACGTGTGT TGCTATATAA ACCCTTACCA TTACCTCATA 360 TTAAGCATCG TATTCAATAT TTGACTATGT TATTACCTCG TACCAATCAA TACTAGCCTA 84589 |||||||| | ||||| |||| ||||||| || |||||||||| |||||||||| |||||||||| TTAAGCATTG TATTCGATAT TTGACTAAGT TATTACCTCG TACCAATCAA TACTAGCCTA 420 TTAGATAGGA TACAC----- -TATGTTGAT AATTATTTTC CTATTATCTA TTTCCTTGGT 84643 | | | || | ||||| |||||| || |||| |||| |||||||||| | |||||| TCAAAAAGTA TACACTAAAT TTATGTTAAT AATTCTTTTG CTATTATCTA CCTTCTTGGT 480 CCGGAAAGTA GCATTAAGGT GAGTTCTAAC GTTGGCCATC CGTTAAAAAG ACTTCTAAGC 84703 |||| ||||| ||| ||||| ||||||||| |||| ||||| |||||||||| |||||||||| CCGGCAAGTA GCACTAAGGC GAGTTCTAAT GTTGACCATC CGTTAAAAAG ACTTCTAAGC 540 GAAAGAATTA TCAATATATG GAAGACGCTG TTCTAGAATT GTTATTTTAG TTAGATTTTA 84763 ||| ||||| |||||| ||| ||||| || |||||||||| |||||||||| |||||||||| AAAACAATTA TCAATACATG CAAGACACTA TTCTAGAATT GTTATTTTAG TTAGATTTTA 600 CTTCATTATT TACCCATGGT TCCCACAACC CTAGTTATGG AGTTTAGTTA CCCATATTTA 84823 | |||||||| ||||||||| |||||||||| |||||||| || ||||||| |||||| | | CCTCATTATT CACCCATGGT TCCCACAACC ATAGTTATGT AGCTTAGTTA CCCATAGTCA 660 TAATCACAAT ATT-A-ATAT ATGTAATATA AGAAT 84856 |||||||||| ||| | |||| || ||||| ||||| TAATCACAAT ATTCATATAT ATCTAATAAT AGAAT 695 hqPGS_C10HBa0115K16.1+_SGN-E241731+ (84174 84856) ******************************************************************************** EST sequence 23 +strand 673 n (File: SGN-E352282+) 1 GACGGGCCGT CATGGCCTCC GTCGTCCCAT ACTTCACATA TTCTTCTTCT TCTATCTTCA 61 TTACCCTCAA CAAACAGGTA TGACAGACTG TTCCAAGAAC GATGGTCTGT CGAGGGTCTC 121 CGTTCCATAA TACTTTAACT TATTTGAATT TGGGTACTGG GAGTACTCTC TGATCATTAT 181 GATGAACCAG CAGGATGGAC CGTTGTGGCA ATGACGGTCC GTCATGGACT TCCGTAATCC 241 CACACTAGGT CATACTTCCC CATCTTCCTT CAGCAACTTC TCTTCTCACT ATGATGACAC 301 CTATGGACCG TCACAGACTC GACGGATCGT CATAAGCTCC GTAGGTGGTC TCTGCTGCAT 361 TTATCACTCA AAAACTTCTG CGTTCATCTT TGGACAGATA ACCTGTAAAT AAGTAGAAAC 421 TGACATAAAA ATCAATACAA AAAGGCTTTT GGACACACAC TAAACTTAAG GAAAAAGCAT 481 TAAAAATACC GTGAAACCAC GGTACATCAA CACCCTCAAC TTAAATTTGT TGTTTGTCCT 541 CAAGTGACAC ACTATGACTC ACTACAAAAT CTTTGTACNA GAGTATCTAT ATTTTAGCGT 601 TCGCAATCAT TTGACTATCA ATCCCAATCA TTCTCATCAT GTTTATGCAT GTTATCACTA 661 TTATGCTTGA ATT Predicted gene structure (within gDNA segment 83599 to 88294): Exon 1 85171 85676 ( 506 n); cDNA 1 510 ( 510 n); score: 0.810 Intron 1 85677 86586 ( 910 n); Pd: 0.000 (s: 0.90), Pa: 0.000 (s: 0) Exon 2 86587 86623 ( 37 n); cDNA 511 543 ( 33 n); score: 0.730 MATCH C10HBa0115K16.1+ SGN-E352282+ 0.810 543 0.807 C PGS_C10HBa0115K16.1+_SGN-E352282+ (85171 85676,86587 86623) Alignment (genomic DNA sequence = upper lines): GACAGGACGT CATGGCCTCC GTTATCCTAT GCTTCACAAA TCCTTCTACT GATTTTTTCA 85230 ||| || ||| |||||||||| || ||| || ||||||| | | ||||| || | | |||| GACGGGCCGT CATGGCCTCC GTCGTCCCAT ACTTCACATA TTCTTCTTCT TCTATCTTCA 60 TTACCCTCGA CAAACAGGTA TGACGAACCA TTCCAAGCAC GACGGTCGGT CGAGGGTCTC 85290 |||||||| | |||||||||| |||| || ||||||| || || |||| || |||||||||| TTACCCTCAA CAAACAGGTA TGACAGACTG TTCCAAGAAC GATGGTCTGT CGAGGGTCTC 120 CGTTCCATAA CACTTAAACT TTTTGGAATT TGGGTACTGG GAGTACTCTC TGATCATCAT 85350 |||||||||| |||| |||| | || ||||| |||||||||| |||||||||| ||||||| || CGTTCCATAA TACTTTAACT TATTTGAATT TGGGTACTGG GAGTACTCTC TGATCATTAT 180 GATGAACCAG TAGGATGGAC TGTCGTGGCT ATGACCGTCC GTCATGAACT T-TGTAATCC 85409 |||||||||| ||||||||| || ||||| ||||| |||| |||||| ||| | ||||||| GATGAACCAG CAGGATGGAC CGTTGTGGCA ATGACGGTCC GTCATGGACT TCCGTAATCC 240 CACACTTAGG TCAGTCTTCC CTATCTTCCT TCAGCAGC-T -TCAT-T-AC ---GATGCCA 85462 ||||| |||| ||| ||||| | |||||||| |||||| | | || | | || |||| || CACAC-TAGG TCATACTTCC CCATCTTCCT TCAGCAACTT CTCTTCTCAC TATGATGACA 299 CCTACGGGCC GTCACAAGCT CGATGAACCG TCACAGGCCC TGTAGGAGGG TAACTTTTCT 85522 |||| || || |||||| || ||| | | || ||| | || | ||||| || | || | || CCTATGGACC GTCACAGACT CGACGGATCG TCATAAGCTC CGTAGG-TGG T--CTCTGCT 356 GCATTTCTTG CTCAAAAACT TTTGCGTTCA CCTTTAGACA GATTTCCTTC AAATAAAGAC 85582 |||||| | |||||||||| | |||||||| |||| |||| ||| ||| |||||| | GCATTTATCA CTCAAAAACT TCTGCGTTCA TCTTTGGACA GATAACCTGT AAATAAGTAG 416 AAACTTACAT AAAAATCAAT ACAAAAAGGC TTTTGGACAC ACACTAAACT TAGGGAAAGA 85642 ||||| |||| |||||||||| |||||||||| |||||||||| |||||||||| || ||||| | AAACTGACAT AAAAATCAAT ACAAAAAGGC TTTTGGACAC ACACTAAACT TAAGGAAAAA 476 GCATTAAAAA TATCGTGAAA CCACAGTATA TCAAGCATCT TCAACCACGT TAGCCTTGTT 85702 |||||||||| || ||||||| |||| ||| | |||| GCATTAAAAA TACCGTGAAA CCACGGTACA TCAA...... .......... .......... 510 GGGAAGGTAG AGAACACTCA TGTCATAATC TTTCAATATT TCCAACCATC TTCTTTCTTG 85762 .......... .......... .......... .......... .......... .......... 510 GAGATTCAAC TTCTTTTGAG TGAACACATA TTGAAAACTC TTATGGTTGG TATGCACATC 85822 .......... .......... .......... .......... .......... .......... 510 CACATGAACA CCATACAAGT AATGCCTCCA TATTTTTAAA GAAAACTCTA TGGATGCTAA 85882 .......... .......... .......... .......... .......... .......... 510 TTCAAGATCG TGAGTTGGGT AATTTTTCTC ATGCACCTTG AGTTGTCAAA AGGCATAGGC 85942 .......... .......... .......... .......... .......... .......... 510 TAATACCTTC ATGTTGCGTA AGGACAACCC AAACCCAATT TGATAGTATC CTAATGTACC 86002 .......... .......... .......... .......... .......... .......... 510 ACAAAACCCT TGATACCCTC TGGTAAGGGT CAAAACCGAA GCGGAGGTAA TCCTCTCTTT 86062 .......... .......... .......... .......... .......... .......... 510 CAAAATTTTA AAGCTTATTT CGCATGCCTC CGACCACTCA AATTTAACAT TCTTTTGGGT 86122 .......... .......... .......... .......... .......... .......... 510 CATGTTAGTC AAAGGAGAAG CAATGGACAC AAACCCATCC ACAAACCTCC TATAAGACCA 86182 .......... .......... .......... .......... .......... .......... 510 GGCTAAACCC AAGAAACTTC TAATGTTGGT TTGTGTCAAT GGTCGAGGCC AATTTTTAAC 86242 .......... .......... .......... .......... .......... .......... 510 CGCCTCGGTT TTCTTTGGAT CGACCTCTAT ACCCTCACTT GAGATAATAT GACCAAGAAA 86302 .......... .......... .......... .......... .......... .......... 510 CTCCACCAAT CTCAACCATA ACTAGAAGTT ACTATAATTG GCAAATAGTT GGTGTTCTTT 86362 .......... .......... .......... .......... .......... .......... 510 AAGAACTTGT AATACCACTC TCAAATGGTT CATATGTTCA CCCTCATTCT TCAAATTTAC 86422 .......... .......... .......... .......... .......... .......... 510 CAGAATATCG TCAATGAAGA CAATTGCAAA GAAATCTAGG TAATTTCGGA AAACCCTATT 86482 .......... .......... .......... .......... .......... .......... 510 AATAAGGTCC ATAAAAGTTG TTGGGGCATT ATTGATACCA AAAGACATCA TTAGGAACTC 86542 .......... .......... .......... .......... .......... .......... 510 ATAGTGATCA TACCTAGTTC GAAAAACCAT TTTAGGTACA CCCTCACCTC TCACCCTAAG 86602 |||| | ||| | ||| .......... .......... .......... .......... ....CACC-C TCAACTTAAA 525 TTTGTGATAC CTTGACCTCA A 86623 ||||| | ||| ||||| | TTTGT--T-G TTTGTCCTCA A 543 hqPGS_C10HBa0115K16.1+_SGN-E352282+ (85171 85676,86587 86623) ******************************************************************************** EST sequence 272 -strand 758 n (File: SGN-E349968-) 1 AGAATTATTT TTTAGTAGGG TTTACCTCAT TATTCGCCTG TGTTCCCACA ACCNTAGTTA 61 TGGAGTTTAG TTACACATAG TCATAATCAC AATATTCAAA TATGTAATAT AAGAATTCAT 121 GCACTTACTT CAATAAGAAA GAAAATAATC AAGAAGTTCA CTTGATTAAT CAACAAAATC 181 ACCAAAAATT AATTACTAAA ATTAATTGAA GACTAAAGAT TCTCCAAGAG TGTAATAAAA 241 ATTACCAAGT CTAATCCACA AAAGAAGCTA AAATAACCAA AGTCTAACTA TAAGAGAGTC 301 TAATCACCAA AGAGTCTAAA ACTAAAAACA AGGTTTTTCA AATTATTTAT AAAAAACAAA 361 AACCTAATTA GAGAAGGACC CTCTTGGCTG GAAATCTGTC AAAATGCGGC TAGGTCGACG 421 GACCTCGCGA CGGGTCGTCA TGGTCACGAT GGGCCATAAT GGACTCCGAC ATCCCATACC 481 TATGCAAAGT CTTCTGTTGG TCTCTTTATT ATCCACGACG GCAGGTATGA CGGATCATCA 541 CAGGCACAAC GGTCCGTCGA GGGTCTTCAT TCCATAACAC TTGAATTCTT GGAATTTGGG 601 TATTGGGACT ACTTCTTTGA TCTTCATGAC GAACTAGCAG GACAGACCAC CATGGCTACG 661 ACGGTCCGTC ACACTCTCCA TAACCCCACA CTTGGTCAGA CTTCCCCATC TTCCTTCAGC 721 AGCTTCACTA CGATGCCACT TACGGACCGT CACAAGCT Predicted gene structure (within gDNA segment 83240 to 91390): Exon 1 84738 85482 ( 745 n); cDNA 1 758 ( 758 n); score: 0.724 MATCH C10HBa0115K16.1+ SGN-E349968- 0.724 745 0.983 C PGS_C10HBa0115K16.1+_SGN-E349968- (84738 85482) Alignment (genomic DNA sequence = upper lines): AGAATTGTTA TTTTAGTTAG ATTTTACTTC ATTATTTACC CATGGTTCCC ACAACCCTAG 84797 |||||| || |||||| ||| ||||| || |||||| || | |||||| |||||| ||| AGAATTATT- TTTTAG-TAG GGTTTACCTC ATTATTCGCC TGT-GTTCCC ACAACCNTAG 57 TTATGGAGTT TAGTTACCCA TATTTATAAT CACAATATTA ATATATGTAA TATAAGAATT 84857 |||||||||| ||||||| || || | ||||| ||||||||| | |||||||| |||||||||| TTATGGAGTT TAGTTACACA TAGTCATAAT CACAATATTC AAATATGTAA TATAAGAATT 117 CATGCACTTA CTTCAATGAG AAAGAATAAA ATCCAGAAGT TCACTTGATT AATTAACAAA 84917 |||||||||| ||||||| || |||||| | | ||| |||||| |||||||||| ||| |||||| CATGCACTTA CTTCAATAAG AAAGAAAATA ATCAAGAAGT TCACTTGATT AATCAACAAA 177 CGCACCAACA ATAAATT-C- AAGAAAAAGT G--TA-TCAA -TTACT-GAA -A-T-TAATC 84967 |||||| | || |||| | || | || | | | | || | || || | | |||| ATCACCAAAA ATTAATTACT AAAATTAATT GAAGACTAAA GATTCTCCAA GAGTGTAAT- 236 GAGGAGTA-- AAGA-T--TC TCCAAAAGTA -TAACAATCA -CAAAG-AAA AATATCCAAG 85019 | | || ||| | || |||||| | | ||| | ||||| | | ||| || AAAAATTACC AAGTCTAATC CACAAAAGAA GCTAAAATAA CCAAAGTCTA ACTATAAGAG 296 AGTATACT-A ACAAAGAGTC TAACCGCAAA AACGAGGTTT TTCCAACTAT TTATAAAAAA 85078 ||| || | | ||||||||| ||| ||| ||| |||||| ||| || ||| |||| ||||| AGTCTAATCA CCAAAGAGTC TAAAACTAAA AACAAGGTTT TTCAAATTAT TTAT-AAAAA 355 ACAAAAACCT AATAAAAGAT GGACTCTAAT TGCTGAAAAT CAGTCAAAAC GTGTTCGAGT 85138 |||||||||| ||| | ||| |||| || | |||| |||| | ||||||| | | || ACAAAAACCT AATTAGAGAA GGACCCTCTT GGCTGGAAAT CTGTCAAAAT GCGGCTAGGT 415 CGACGGACAT CGTGACGGGC CGTCATTGTC ATGACAGGAC GTCATGGCCT CCGTTATCCT 85198 |||||||| | || |||||| |||||| ||| | || || | | |||| || ||| |||| CGACGGACCT CGCGACGGGT CGTCATGGTC ACGATGGGCC ATAATGGACT CCGACATCCC 475 AT-GCTTCAC AAATCCTTCT ACTGATTTTT TCATTACCCT CGACAAACAG GTATGACGAA 85257 || || | ||| ||||| || | | | | |||| || |||| ||| |||||||| | ATACCTATGC AAAGTCTTCT GTTGGTCTCT TTATTATCCA CGAC-GGCAG GTATGACGGA 534 CCATTCCAAG CACGACGGTC GGTCGAGGGT CTCCGTTCCA TAACACTTAA ACTTTTTGGA 85317 ||| || | ||| |||||| ||||||||| || | ||||| |||||||| | | || ||||| TCATCACAGG CACAACGGTC CGTCGAGGGT CTTCATTCCA TAACACTTGA A-TTCTTGGA 593 ATTTGGGTAC TGGGAGTAC- TCTCTGATCA TCATGATGAA CCAGTAGGAT GGACTGTCGT 85376 ||||||||| ||||| ||| ||| ||||| |||||| ||| | || |||| ||| | | ATTTGGGTAT TGGGACTACT TCTTTGATCT TCATGACGAA CTAGCAGGAC AGACCACCAT 653 GGCTATGACC GTCCGTCATG AACTTTGTAA TCCCACACTT AGGTCAGTCT TCCCTATCTT 85436 ||||| ||| |||||||| || ||| ||||||||| |||||| || |||| ||||| GGCTACGACG GTCCGTCACA CTCTCCATAA CCCCACACTT -GGTCAGACT TCCCCATCTT 712 CCTTCAGCAG CTTCATTACG ATGCCACCTA CGGGCCGTCA CAAGCT 85482 |||||||||| ||||| |||| ||||||| || ||| |||||| |||||| CCTTCAGCAG CTTCACTACG ATGCCACTTA CGGACCGTCA CAAGCT 758 hqPGS_C10HBa0115K16.1+_SGN-E349968- (84738 85482) ******************************************************************************** EST sequence 37 +strand 542 n (File: SGN-E252199+) 1 CTTGATGAGA ATTTGTCTTA TGAGGAGGAG CCTGTTGCCA TTTTAGATAG AGAAGTCCGC 61 AAATTGAGGT CAAGGGAGAT TGCATCTATC AAAGTTCAAT GGAAGAATCG ACCAGTTGAA 121 GAATCCACTT GGGAGAAGGA AGTTGATATG CGAGAAAGAT ACCCATACCT GTTTACAGAT 181 TCAGGTACTC CTTTTCGCCC TTGTTTTTCT TCTTGTGATC GTTCGGGGAC GAACGATGGG 241 TAAATTGGTA TCTATTGTAA CGACCTGTTT AGTCGTTTTG AGTAACAGAT TTTATTTCTG 301 GAAAAACTGA CTGAGACGAC GGATCCCACG ACGGACCGTC GAGGGGGTCT CGTTCCAAAA 361 CACTTAGAAT TCTGAAATTT GGGTACTGAA ATCGACTCTC TGAACTTCGT GACGGAATGG 421 CAGGACGGAC CGTCACAGGC GTGATGGGCC GTCACAGACC CTTGGTAAAA ATCTAGTCTC 481 TGAACTCTGT GACGGACGTG CAGGACGGAC CGTCACAGAC TGCGTAATCC CAGGCTGGGT 541 CG Predicted gene structure (within gDNA segment 87737 to 94264): Exon 1 88615 88639 ( 25 n); cDNA 227 252 ( 26 n); score: 0.580 Intron 1 88640 92661 (4022 n); Pd: 0.000 (s: 0), Pa: 0.000 (s: 0.84) Exon 2 92662 92946 ( 285 n); cDNA 253 518 ( 266 n); score: 0.796 MATCH C10HBa0115K16.1+ SGN-E252199+ 0.796 310 0.572 C PGS_C10HBa0115K16.1+_SGN-E252199+ (88615 88639,92662 92946) Alignment (genomic DNA sequence = upper lines): GGAGGAATGA CCGG-AGCTT GGTCTTATGG AGGCACTTGA TTGCCTTGTG GAGCGGCTTG 88673 ||| ||| || || | || ||| | GGACGAACGA TGGGTAAATT GGTATC.... .......... .......... .......... 252 GTTCTCTCAG GGAGGAACTC CCGCATTAGC CAAATCTTTC TCTACTCTCC TTGCGGCTTC 88733 .......... .......... .......... .......... .......... .......... 252 CCGTCGTGTA GTCATCTCCA ATATCAATAA GAAAATGATT AGAAGAGAAA GGGACACATA 88793 .......... .......... .......... .......... .......... .......... 252 GAATTACCAT TCATAAGAAA CAACTTTCAA CATTACCAAG AAGTTAGAAT TCTTAATCAT 88853 .......... .......... .......... .......... .......... .......... 252 CACATAGCCT CTCATTCATA AGTCTGACAC GCTTCACACC TATGAACAAG ACTCTACATA 88913 .......... .......... .......... .......... .......... .......... 252 GATGTTTTTT AGTGAGACAT TAACCCTAAG ATTACTTTCA ACCTCATGCT CTGTACCAAG 88973 .......... .......... .......... .......... .......... .......... 252 TTTTTCACGA CCGGGGAGCA ACCCCTAGAT GTAACCGGCG TCATCTTCCT CGGAGAGGAC 89033 .......... .......... .......... .......... .......... .......... 252 TAAGACTAGC TCATAGCATT TGTCATAACA TTTCATAGGT TAAAACGCGC AAAAATTAAA 89093 .......... .......... .......... .......... .......... .......... 252 AACTTTTATA TATTGAGGTT TACATAGACC TCTCACATAC TACTAAGGGA GTTTACTTAG 89153 .......... .......... .......... .......... .......... .......... 252 CCTCCTCGCA TAGAAAGCAA ACATAGGCTT ATCTTTTAGG TGATATAACC AACATATAAG 89213 .......... .......... .......... .......... .......... .......... 252 AATTTAGTCT AATAATATTT TCTCACATTA ATCCATCCAA AACAAATTAG AATATTATAT 89273 .......... .......... .......... .......... .......... .......... 252 CATAACCCTT AATACAAAAT TATAATTGCC GCATAGAGCT TACAACAATT TGTTCAACAA 89333 .......... .......... .......... .......... .......... .......... 252 TAGCAGGGAA ATAAATGCCT TTAGACTATA GAAATACTAC TAAGGTAGAG TACATGGCAC 89393 .......... .......... .......... .......... .......... .......... 252 CATCCTTAAA ACTAGAGGAC TTACCAAAAC TTGGGGAAAT GTCCAAGTCA TCTTGCAAGC 89453 .......... .......... .......... .......... .......... .......... 252 GACCTTGATA CCTTAACGGT CCGAACCTAC ATTATTTATG AAAAGGGAAA GAATATGGGT 89513 .......... .......... .......... .......... .......... .......... 252 AAGTACATTC ACTTCTACTA AGTATGGAAA CATATGCACA TATAATCTTT GAAATCATGC 89573 .......... .......... .......... .......... .......... .......... 252 TTAAAAGGAA ATTTTGTTCA AAGTCGTGCA AAGTCTCTTC TGAAAGACTT AATGCACAAA 89633 .......... .......... .......... .......... .......... .......... 252 TAAGAGCACA TATAAGCCAA TGATCACATA TTCATTAAGA CAAGTCCATA TGCACACAAG 89693 .......... .......... .......... .......... .......... .......... 252 ATCAGCGTCA TCAATAAAGT CATGTCAATA TGGATATTAT CAACATAAGG TCATATCAAC 89753 .......... .......... .......... .......... .......... .......... 252 ATGAATAGTA GTAGCACATA GATATCATAT GACCAAAGCA ACTCCAACAT AATGCCATAA 89813 .......... .......... .......... .......... .......... .......... 252 CAACAAAACA TGTTCAAGAG TTCATATCAC CATTAGCTTA TAAGATCCTT ACAAACAATC 89873 .......... .......... .......... .......... .......... .......... 252 TCATCACATG AATACAAGTG CAATGCTCAA GTGAAGTCCC ATAACCCCAA TAATCAAGTA 89933 .......... .......... .......... .......... .......... .......... 252 AACAAGGAAA GAGATCATAA GTAATTCCTA ACTTCATATA ACATAGCATC CTGAGTAGTC 89993 .......... .......... .......... .......... .......... .......... 252 ATCATCATAT ATAGCAATAT AGACCAATAA CATGTTCATA GACGCTCAAA TCATATAGGA 90053 .......... .......... .......... .......... .......... .......... 252 TCATCAACAT ATAAATTCAA CATACACATA TCACTTACTT TATAAGAGCA TAAGAACAAC 90113 .......... .......... .......... .......... .......... .......... 252 CTCATATGAC TTCTCTCATG TCCAACTTGT GCAATGTATA GGTAGAGTCC CACACCCCAC 90173 .......... .......... .......... .......... .......... .......... 252 CTACATTAAG AAGAAGCCCT TAAGTGACCC TAGTTAGAGT TCACTATTAC TTTCATTTTA 90233 .......... .......... .......... .......... .......... .......... 252 CTTTTGGAAA CAATCGCCTT AACCGACAAT AGACCACGTG ATCTAAACAT GGAATCCAGT 90293 .......... .......... .......... .......... .......... .......... 252 GTCATGAAAC CCTACACCGA AATAAGATGG CCTTCTTTCC AAGGTAGGAC CAAAACATGA 90353 .......... .......... .......... .......... .......... .......... 252 ACATAGCATT CTAGGTTAAT TCACTAGCTA GTATTCCTAT GGGGACAACA TAGTTCAAGA 90413 .......... .......... .......... .......... .......... .......... 252 TCTAGAAGAC ATGTGTTTGA CTCTCTGTAT GCCCTTCTAT GGGAGTCAAC ATCTAGCATT 90473 .......... .......... .......... .......... .......... .......... 252 GTCAAGTTCA CTCGGTGTTA AGATAAAGTC CTTTTTTGAA ATGACGTTAA GTCATTATTT 90533 .......... .......... .......... .......... .......... .......... 252 AACAATCATA CATTAATTTA GGTCATAGGA GACTAACCCT TTATATTGCA TGTCATTTAT 90593 .......... .......... .......... .......... .......... .......... 252 CTCATTAGGA ATAGGACGAG AACTTCCTTT CATCATACAA CAATCATTAG TGAGATCACA 90653 .......... .......... .......... .......... .......... .......... 252 TATTATAGTC ATTATCACAT AAAGCACACA AGAGGATCAT CTTCAACCTT TCACCCTCAC 90713 .......... .......... .......... .......... .......... .......... 252 AACGTTACCA TTGTCACATC CAGGGAGCAC CCCCTTAGAA GTAACATGGT GTACTTGACC 90773 .......... .......... .......... .......... .......... .......... 252 TCTCAAAGGT ATTATACAAG CCCATAGCTA TCATTCATTT GATTATCATA GTAAATTTAG 90833 .......... .......... .......... .......... .......... .......... 252 TAGAAAATTT AAAACTTTTC ATAGCACTTG ATATGCTAGA AATTTTACCT CATAAAAATA 90893 .......... .......... .......... .......... .......... .......... 252 AAATATCACA AGTACATATT CAAACCTTAA GTCTCTTCGT CATCCTAGAC ATAACATCAT 90953 .......... .......... .......... .......... .......... .......... 252 AAGAGTAATT TAGATACACG GCCCTTGAAA CATAACACCT AAGTAAGCTT ATACACTTTA 91013 .......... .......... .......... .......... .......... .......... 252 CATAAGACAT GACTTAGGAA TCATTGAACT TAAGGACTCT TTCCTTGAGC TTGGGTATCA 91073 .......... .......... .......... .......... .......... .......... 252 CATATCAAGC TCCTCAATCA TATAGACATC CTTTAAGCGT CCATAACCTA AACATTGTGC 91133 .......... .......... .......... .......... .......... .......... 252 AAAAAAGTAG AGAATAATAG AGTTAGTAAC AAGAATGCAC TAAGTATGGA AACAATGCAA 91193 .......... .......... .......... .......... .......... .......... 252 AAACATGCAC TTAAAAAGTA ACATTTTTCT TGAAATCCAT ACATAATGCC TTTTTTATGA 91253 .......... .......... .......... .......... .......... .......... 252 AATATTTATA AAACATTTCT ACAATAGAAT TTATATCATT CACATACTTC ATATAGACAT 91313 .......... .......... .......... .......... .......... .......... 252 ATTCAAAGTC CAAATATCAA ATAAAATCAC ATATAGAATT TAAAGCACAT TTGAGGTCAC 91373 .......... .......... .......... .......... .......... .......... 252 TTTATAGTGA GCTCTTTTCT TTTTACAGTA AGCTTTTTTC TTTAACAGTG AATATCTTTC 91433 .......... .......... .......... .......... .......... .......... 252 TTTTAACTTC TTAATCTCCC AAGAACCCTC TAGTGATTCT AGGTGCAATG CATCGCCTTA 91493 .......... .......... .......... .......... .......... .......... 252 AGGCCACAAA GAATTATGCA TACTACTTAT ATAAGCCAAC ACATACCCTC GTAGAAGAAT 91553 .......... .......... .......... .......... .......... .......... 252 AATATTATTG GCAACCAACA TACACTTCAA TATAGGGCCT TACTCACACA GTCATATTAG 91613 .......... .......... .......... .......... .......... .......... 252 AAATTCATGT CATACATATC ATCTCATCAT GTAAACACCA ACACAATGTC ATGCAAGAGA 91673 .......... .......... .......... .......... .......... .......... 252 ACCATAAACA TATACACATG CATTAGAACA CCTTCCTAGG AATTCTCTCA AGTGTCACTT 91733 .......... .......... .......... .......... .......... .......... 252 GTGCAATGGA TAGGTGAAGT CTCATACCCC ATCTACACTA AGCAACTACC CTTAAGTTAT 91793 .......... .......... .......... .......... .......... .......... 252 CCTAGTTAGG GTCCTTACTT TACTTCCATT GTCCATTTTA CTTTAGGGAA ACTATAGTCT 91853 .......... .......... .......... .......... .......... .......... 252 TAACCTACAA TAAGACTATG TAAGCAAAAC ATGGAATTTG ATGTCATCCC CTCACACAAA 91913 .......... .......... .......... .......... .......... .......... 252 AAGAGGGTGC CTTACTTGCC AAGGTAAGAC ATAAGTATCA TGCTAGCATA TTAGGTGATA 91973 .......... .......... .......... .......... .......... .......... 252 TCACTTGCAA GATCCTATGA GGCAACACAT TTATGGAACT TGGAGGCATT GTGGAAACAT 92033 .......... .......... .......... .......... .......... .......... 252 ATCTCTAACA CCCTTTTGGG GTCATGAGGC TATCCACCTC ATGAGGATTA TGGTGACCTA 92093 .......... .......... .......... .......... .......... .......... 252 CTTTCCTCCA ATAAAAGGGA CACTTGTCAC TTCAAGTTCA CTAAGTTCTA AGCTAAGTTC 92153 .......... .......... .......... .......... .......... .......... 252 CCTTTATTAA ATTCTTTATT ACTTTGCTTT ATAAAACATG AGCTTTTAGG AGATTCACTT 92213 .......... .......... .......... .......... .......... .......... 252 CCCATATGCT TAGCTTCATC GGTTATAGAT GAGAAGTCTT TTCATCAACC TATATCATAA 92273 .......... .......... .......... .......... .......... .......... 252 CACAAAACCT TTCATAGGGA CATAGCATAT GTAAGCATTT ATCTAGTTTA GCATACTCTT 92333 .......... .......... .......... .......... .......... .......... 252 GAGAACACCT TTCAAGATCC CCTCTACTAA CTAGATTATC ATTCATGTGT GTGTGTATAT 92393 .......... .......... .......... .......... .......... .......... 252 ACATGTGAGG AAACCTTTCA CATAACACCT TTAGACCACA CATATTCATA CTTCACTTCA 92453 .......... .......... .......... .......... .......... .......... 252 TTCATGCATG AGTGTACAAG TGTAACTATA TGAGCCATGC TTTCATATAA ACACATTTAG 92513 .......... .......... .......... .......... .......... .......... 252 ACACTAGGTA TAATCATACT TCACATTACA GCATGTAAGA TACATTTGTA ACATGATCAT 92573 .......... .......... .......... .......... .......... .......... 252 ATACATTCAC TTTCACGTAC ATAGAAACCA AACCTAGGAA CTATCCTATC AAGGTACATA 92633 .......... .......... .......... .......... .......... .......... 252 TGTGTAATGC ATAAACAAGG TCCCATACCC TTGTAACGAC CCGTTTAGTC ATTTTGAGCG 92693 |||||||||| | |||||||| ||||||| .......... .......... ........TA TTGTAACGAC CTGTTTAGTC GTTTTGAGTA 284 GCAGACTTTA TTTCTGGAAA AACTGGCAGA AGCGACGAAC CCCATGACGG ACCGTCATGG 92753 |||| |||| |||||||||| ||||| | || ||||| | |||| ||||| |||||| ACAGATTTTA TTTCTGGAAA AACTGACTGA GACGACGGAT CCCACGACGG ACCGTC---- 340 GCACGACGGA CTGTCGCAGG GTCTCATTTC AAAACACTTA GAAAATCTGA AA-TTGGGTA 92812 | | | || ||| | || || | |||||||||| | || ||||| || ||||||| G-A-GG-GG- --GTCTC--- GT-TC----C AAAACACTTA G-AATTCTGA AATTTGGGTA 385 CTAAAAATCG ACTCTCTGAA CTTTGTGACG GAATGGAAGG ACGGACCGTC ACAGGTGTGA 92872 || || |||| |||||||||| ||| |||||| |||||| ||| |||||||||| ||||| |||| CTGAA-ATCG ACTCTCTGAA CTTCGTGACG GAATGGCAGG ACGGACCGTC ACAGGCGTGA 444 CGGACCGTCA CAGACCCTTG GTGGAAATTT GGGTCTCTGA ACTCTACGAC -GACCTGCAG 92931 || |||||| |||||||||| || |||| | |||||||| ||||| ||| ||| ||||| TGGGCCGTCA CAGACCCTTG GTAAAAATCT -AGTCTCTGA ACTCTGTGAC GGACGTGCAG 503 GACGGACCGT CGCAG 92946 |||||||||| | ||| GACGGACCGT CACAG 518 hqPGS_C10HBa0115K16.1+_SGN-E252199+ (92662 92946) ******************************************************************************** EST sequence 195 +strand 686 n (File: SGN-E241789+) 1 ATGTCTGATC TTCAAGGACA TCAAGACATG AATGAGAGAG AATCCAGTCC GAGCTAGGAA 61 CAATAGCTCA CCCTGAAATC TGACGTGATG AAGACTGGTT AGAGTTGCGG TTGAGTTGAA 121 GACGACGGTA CGTTTGCTGC ACTCCACAAT TAACAAAAAG AAAACATAAA AGTAGGGGTC 181 AGTACAAACA CGAGTACTGA GTAGATATCA TCGGCCAACT CAGAATAGAG AACAATATAT 241 ATCAAATAAT AAAATAAAAT CAACCATAAC ACTTAACAGG TGACAACAAC AAGTACCATA 301 ACCATTGGGC ACAACCCAAG AACATCTATG AGGACTCAAG CCTCCACACC ATACTCATTT 361 GGGAAACAGG TTCATTAAAT TGAGTACATT AACATAATTC AAGATTCATT CTTTTTACTA 421 TCGTGGTGTC GGAACGTGAT ACTCCGATCC CCTAATGCTA CGTGTCGGTT CGTGACACCC 481 GATCCCCTAA TACTACGTGT CGGTTCGTTA CACCCGATCT CCTAATACTA CGTGCCGATT 541 CGTGACACCC GATCCATTAA TACTATGTGT CGGTTCGTGA CACCCGATCC ATTAATACTA 601 CGTGTCGGTT CGTGACACCC GATCCCCTAA CCTCATTCTT TTAGTTCATC AAGCCTTCTT 661 TTATACCAAG ACATCATCAT TAACAA Predicted gene structure (within gDNA segment 96078 to 91354): Exon 1 94314 93873 ( 442 n); cDNA 1 443 ( 443 n); score: 0.783 Intron 1 93872 93757 ( 116 n); Pd: 0.000 (s: 0.76), Pa: 0.000 (s: 0.96) Exon 2 93756 93572 ( 185 n); cDNA 444 628 ( 185 n); score: 0.919 Intron 2 93571 93525 ( 47 n); Pd: 0.900 (s: 0.92), Pa: 0.000 (s: 0.82) Exon 3 93524 93467 ( 58 n); cDNA 629 686 ( 58 n); score: 0.828 MATCH C10HBa0115K16.1- SGN-E241789+ 0.823 685 0.999 C PGS_C10HBa0115K16.1-_SGN-E241789+ (94314 93873,93756 93572,93524 93467) Alignment (genomic DNA sequence = upper lines): ATGCCAGAAG TTCAAGG-CA TCAAGACTTG AA-GAAGGAG -ATCCAGTCC AAGCTAGAAG 94258 ||| | || ||||||| || ||||||| || || || ||| ||||||||| |||||| | ATGTCTGATC TTCAAGGACA TCAAGACATG AATGAGAGAG AATCCAGTCC GAGCTAGGAA 60 CATTAGCTCA CCCTGAATTT CCGATGTGGT -AAGACTGGC TTGAATTACT GTTGAGTTGA 94199 || ||||||| ||||||| | | || ||| | |||||||| | || || | |||||||||| CAATAGCTCA CCCTGAA-AT CTGACGTGAT GAAGACTGGT TAGAGTTGCG GTTGAGTTGA 119 AGACGATGGC ACGTTTGCTG CACTCCACAA ATAAACAAGA AGAAAACATA AAAGTAGGGG 94139 |||||| || |||||||||| |||||||| | || ||||| | |||||||||| |||||||||| AGACGACGGT ACGTTTGCTG CACTCCAC-A ATTAACAAAA AGAAAACATA AAAGTAGGGG 178 TTAGTACAAA ACACGGGTAC TCAGTAGATA TCATCGGCCA ACTCAAAATA GGGGACAGTA 94079 | ||||| || ||||| |||| | |||||||| |||||||||| ||||| |||| | | ||| || TCAGTAC-AA ACACGAGTAC TGAGTAGATA TCATCGGCCA ACTCAGAATA GAGAACAATA 237 TATATC-AAT ATTATCGT-A AATCAACTAT AAAACTCAAC ATGTAGCCAC AACAAGTATT 94021 |||||| ||| | || | | ||||||| || || ||| ||| | || | || |||||||| TATATCAAAT AATAAAATAA AATCAACCAT AACACTTAAC AGGTGACAAC AACAAGTACC 297 ATAATCATCA ATAAGTACCA TCAAGTTCAT CCATGAGGGC TCAAGCCTTA ACACCATACT 93961 |||| ||| | ||| |||| ||| | |||||| | |||||||| |||||||||| ATAACCATTG GGCACAACC- -CAAGAACAT CTATGAGGAC TCAAGCCTCC ACACCATACT 355 CATTTGGGAA TTATGTTCGT TAGATTGAGT ATATTAACAT CTTTCAAGAT TCATTATCTT 93901 |||||||||| | |||| | || ||||||| | |||||||| |||||||| ||||| | || CATTTGGGAA ACAGGTTCAT TAAATTGAGT ACATTAACAT AATTCAAGAT TCATTCTTTT 415 TAATTCTCTT GTGTCGGTAC GTGACACTTC GATCCCTCAT ATTCATTATT CCTCTTGTGT 93841 || | | ||||||| || |||| ||| TACTATCGTG GTGTCGGAAC GTGATACT.. .......... .......... .......... 443 CGGTACGTGA CACTCCGATC CCCTATATCT ACGTGTCGGT TCGTGACACC CGATCCCCTA 93781 .......... .......... .......... .......... .......... .......... 443 ATTCTACGTG TCGGTTCGTG ACACCCGATC CCCTAATTCT ACGTGTCGGT TCGTGACACC 93721 |||||| ||||||| || |||||||||| |||||||||| .......... .......... ....CCGATC CCCTAATGCT ACGTGTCGGT TCGTGACACC 479 CGATCCCCTA ATTCTACGTG TCGGTTCGTG ACACCCGATC CCCTAATTCT ACGTGTCGGT 93661 |||||||||| || ||||||| ||||||||| |||||||||| |||||| || ||||| || | CGATCCCCTA ATACTACGTG TCGGTTCGTT ACACCCGATC TCCTAATACT ACGTGCCGAT 539 TCGTGACACC CGATCCCCTA ATTCTACGTG TCGGTTCGTG ACACCCGATC CCCTAATTCT 93601 |||||||||| |||||| || || ||| ||| |||||||||| |||||||||| | |||| || TCGTGACACC CGATCCATTA ATACTATGTG TCGGTTCGTG ACACCCGATC CATTAATACT 599 ACATGTCGGT TCGTGACACC CGATCCCCTA TATCATTCTG TAAATCATCA GGCCTTCTCT 93541 || ||||||| |||||||||| ||||||||| ACGTGTCGGT TCGTGACACC CGATCCCCT. .......... .......... .......... 628 ATACCAAGGC ATCATCAATC CCATTAATTT AATTCATAAA GCCTTCTTCT ATACCAAAGC 93481 || | |||| ||| | ||||| || |||||||| | ||||||| | .......... ......AACC TCATTCTTTT AGTTCATCAA GCCTTCTTTT ATACCAAGAC 672 ATCATCATTA ATAA 93467 |||||||||| | || ATCATCATTA ACAA 686 hqPGS_C10HBa0115K16.1-_SGN-E241789+ (94314 93873,93756 93572,93524 93467) ******************************************************************************** EST sequence 124 +strand 729 n (File: SGN-E550212+) 1 ATCGATTCTC CTTCTCTCTC TTTCTGTTCT TTTCTTTTTC TTATTCAAAC CCTCCTTCTT 61 TTACCCTAAT TAGCATATAA TTAAGAATAA AAGATGGAAT AATAACCCAC TAATTTACTC 121 AAGGTTACCT CTTTTAACCC CCAGGTAATT AGACTTATTA ACATAAACCC ACTAACTTTA 181 TAATTAAAGT AGGAATAGTC CAAAACGTCC CTTAAAACGT GTAAAGAAAT CCGACCCAGA 241 CTGGGATTAC GCAACCTGTG ATGGCCCGTC GTGCCTGCGA CGGTCCGTCC TGCAGGTCGT 301 CGCAAGGTTC AGAGACTCAA TTTCCACCAA AGAGTCTGTG ACGGTCCGTC ACGCCCGTGA 361 CGGTCCGTCG TGCCATTCCG TTACGAAGTT CAGAGAGTCG ATTTTTAGTA CCCAATTTCA 421 GAATTTCTAA GTGTTTTGAA ACGAGACTCC TCGACGGTCC ATCGTGCTCA TGACGGTCCG 481 TCGTGGGTTC CGTCGTCTCA ACCTGTTTTT CCAAAAATAA AATCTGCTAC TCAAAACGAC 541 TAAACAGGTC GTTACATTTA TGTTCTTCCT ACTTAAATAT TATTATTATT TTACGATTTA 601 TAACACTATT AGAAACAAAG ATTTTCTCAA CCATGAATTA ATGAAAAAAT TATGCCATAA 661 AATATAAAAA ATTTACTCAT TTTTCATTGA GCTAATTCAT AAAAAAAAAA AAAAAACTCG 721 GGGGGGGGC Predicted gene structure (within gDNA segment 94317 to 89290): Exon 1 93219 92665 ( 555 n); cDNA 2 556 ( 555 n); score: 0.849 PPA cDNA 699 716 MATCH C10HBa0115K16.1- SGN-E550212+ 0.849 555 0.761 C PGS_C10HBa0115K16.1-_SGN-E550212+ (93219 92665) Alignment (genomic DNA sequence = upper lines): TCGATTCTCC CTCTCTCTCT TGTTCTT-TC TATTTTCT-T TATTCCAACC CTATTTCTTT 93162 |||||||||| ||||||||| | | || | | ||| | | ||||| |||| || |||||| TCGATTCTCC TTCTCTCTCT TTCTGTTCTT TTCTTTTTCT TATTCAAACC CTCCTTCTTT 61 TACCCTAATT AGTATATAAT TAAGAATAAA AGATGGCAAT AATACCCCAC TAATTAACTT 93102 |||||||||| || ||||||| |||||||||| |||||| ||| |||| ||||| ||||| ||| TACCCTAATT AGCATATAAT TAAGAATAAA AGATGG-AAT AATAACCCAC TAATTTACTC 120 AGGGTTACCT CTTTTAACCC CTCAAG-AAT TTGAGTTATT AATATAAACC CACGAACTTT 93043 | |||||||| |||||||||| | || | ||| | || ||||| || ||||||| ||| |||||| AAGGTTACCT CTTTTAACCC C-CAGGTAAT TAGACTTATT AACATAAACC CACTAACTTT 179 ATAATTAAGG CAAGAATAGT CAAAAACGTC CCTTAAAACT TAACCAGAAA TCCGACTCTG 92983 |||||||| | | ||||||| | |||||||| ||||||||| | ||||| |||||| | | ATAATTAAAG TAGGAATAGT CCAAAACGTC CCTTAAAACG TGTAAAGAAA TCCGACCCAG 239 CCTGGGATTT GCACAACCTG TGACGGGCCG TCGTGCCTGC GACGGTCCGT CCTGCAGGTC 92923 |||||| || | ||||||| ||| || ||| |||||||||| |||||||||| |||||||||| ACTGGGA-TT ACGCAACCTG TGATGGCCCG TCGTGCCTGC GACGGTCCGT CCTGCAGGTC 298 GTCGTAGAGT TCAGAGACCC AAATTTCCAC C-AAGGGTCT GTGACGGTCC GTCACACCTG 92864 |||| | || |||||||| | ||||||||| | ||| |||| |||||||||| ||||| || | GTCGCAAGGT TCAGAGACTC -AATTTCCAC CAAAGAGTCT GTGACGGTCC GTCACGCCCG 357 TGACGGTCCG TCCTTCCATT CCGTCACAAA GTTCAGAGAG TCGATTTTTA GTACCCAATT 92804 |||||||||| || | ||||| |||| || || |||||||||| |||||||||| |||||||||| TGACGGTCCG TCGTGCCATT CCGTTACGAA GTTCAGAGAG TCGATTTTTA GTACCCAATT 417 TCAGATTTTC TAAGTGTTTT GAAATGAGAC CCTGCGACAG TCCGTCGTGC CCATGACGGT 92744 ||||| |||| |||||||||| |||| ||||| | |||| | ||| |||||| ||||||||| TCAGAATTTC TAAGTGTTTT GAAACGAGAC TCCTCGACGG TCCATCGTGC TCATGACGGT 477 CCGTCATGGG GTTCGTCGCT TCTGCCAGTT TTTCCAGAAA TAAAGTCTGC CGCTCAAAAT 92684 ||||| |||| | ||||| || || ||| |||||| ||| |||| ||||| ||||||| CCGTCGTGGG TTCCGTCGTC TCAACCTGTT TTTCCAAAAA TAAAATCTGC TACTCAAAAC 537 GACTAAACGG GTCGTTACA 92665 |||||||| | ||||||||| GACTAAACAG GTCGTTACA 556 hqPGS_C10HBa0115K16.1-_SGN-E550212+ (93219 92665) ******************************************************************************** EST sequence 126 +strand 710 n (File: SGN-E550065+) 1 ATCGATTCTC CTTCTCTCTC TTTCTGTTCT TTTCTTTTTC TTATTCAAAC CCTCCTTCTT 61 TTACCCTAAT TAGCATATAA TTAAGAATAA AAGATGGAAT AATAACCCAC TAATTTACTC 121 AAGGTTACCT CTTTTAACCC CCAGGTAATT AGACTTATTA ACATAAACCC ACTAACTTTA 181 TAATTAAAGT AGGAATAGTC CAAAACGTCC CTTAAAACGT GTAAAGAAAT CCGACCCAGA 241 CTGGGATTAC GCAACCTGTG ATGGCCCGTC GTGCCTGCGA CGGTCCGTCC TGCAGGTCGT 301 CGCAAGGTTC AGAGACTCAA TTTCCACCAA AGAGTCTGTG ACGGTCCGTC ACGCCCGTGA 361 CGGTCCGTCG TGCCATTCCG TTACGAAGTT CAGAGAGTCG ATTTTTAGTA CCCAATTTCA 421 GAATTTCTAA GTGTTTTGAA ACGAGACTCC TCGACGGTCC ATCGTGCTCA TGACGGTCCG 481 TCGTGGGTTC CGTCGTCTCA ACCTGTTTTT CCAAAAATAA AATCTGCTAC TCAAAACGAC 541 TAAACAGGTC GTTACATTTA TGTTCTTCCT ACTTAAATAT TATTATTATT TTACGATTTA 601 TAACACTATT AGAAACAAAG ATTTTCTCAA CCATGAATTA ATGAAAAAAT TATGCCATGA 661 AATATAAAAA ATTTACTCAT TTTTCATTGA GCTGATTCAT AAGAAAAAAA Predicted gene structure (within gDNA segment 94317 to 89480): Exon 1 93219 92665 ( 555 n); cDNA 2 556 ( 555 n); score: 0.849 MATCH C10HBa0115K16.1- SGN-E550065+ 0.849 555 0.782 C PGS_C10HBa0115K16.1-_SGN-E550065+ (93219 92665) Alignment (genomic DNA sequence = upper lines): TCGATTCTCC CTCTCTCTCT TGTTCTT-TC TATTTTCT-T TATTCCAACC CTATTTCTTT 93162 |||||||||| ||||||||| | | || | | ||| | | ||||| |||| || |||||| TCGATTCTCC TTCTCTCTCT TTCTGTTCTT TTCTTTTTCT TATTCAAACC CTCCTTCTTT 61 TACCCTAATT AGTATATAAT TAAGAATAAA AGATGGCAAT AATACCCCAC TAATTAACTT 93102 |||||||||| || ||||||| |||||||||| |||||| ||| |||| ||||| ||||| ||| TACCCTAATT AGCATATAAT TAAGAATAAA AGATGG-AAT AATAACCCAC TAATTTACTC 120 AGGGTTACCT CTTTTAACCC CTCAAG-AAT TTGAGTTATT AATATAAACC CACGAACTTT 93043 | |||||||| |||||||||| | || | ||| | || ||||| || ||||||| ||| |||||| AAGGTTACCT CTTTTAACCC C-CAGGTAAT TAGACTTATT AACATAAACC CACTAACTTT 179 ATAATTAAGG CAAGAATAGT CAAAAACGTC CCTTAAAACT TAACCAGAAA TCCGACTCTG 92983 |||||||| | | ||||||| | |||||||| ||||||||| | ||||| |||||| | | ATAATTAAAG TAGGAATAGT CCAAAACGTC CCTTAAAACG TGTAAAGAAA TCCGACCCAG 239 CCTGGGATTT GCACAACCTG TGACGGGCCG TCGTGCCTGC GACGGTCCGT CCTGCAGGTC 92923 |||||| || | ||||||| ||| || ||| |||||||||| |||||||||| |||||||||| ACTGGGA-TT ACGCAACCTG TGATGGCCCG TCGTGCCTGC GACGGTCCGT CCTGCAGGTC 298 GTCGTAGAGT TCAGAGACCC AAATTTCCAC C-AAGGGTCT GTGACGGTCC GTCACACCTG 92864 |||| | || |||||||| | ||||||||| | ||| |||| |||||||||| ||||| || | GTCGCAAGGT TCAGAGACTC -AATTTCCAC CAAAGAGTCT GTGACGGTCC GTCACGCCCG 357 TGACGGTCCG TCCTTCCATT CCGTCACAAA GTTCAGAGAG TCGATTTTTA GTACCCAATT 92804 |||||||||| || | ||||| |||| || || |||||||||| |||||||||| |||||||||| TGACGGTCCG TCGTGCCATT CCGTTACGAA GTTCAGAGAG TCGATTTTTA GTACCCAATT 417 TCAGATTTTC TAAGTGTTTT GAAATGAGAC CCTGCGACAG TCCGTCGTGC CCATGACGGT 92744 ||||| |||| |||||||||| |||| ||||| | |||| | ||| |||||| ||||||||| TCAGAATTTC TAAGTGTTTT GAAACGAGAC TCCTCGACGG TCCATCGTGC TCATGACGGT 477 CCGTCATGGG GTTCGTCGCT TCTGCCAGTT TTTCCAGAAA TAAAGTCTGC CGCTCAAAAT 92684 ||||| |||| | ||||| || || ||| |||||| ||| |||| ||||| ||||||| CCGTCGTGGG TTCCGTCGTC TCAACCTGTT TTTCCAAAAA TAAAATCTGC TACTCAAAAC 537 GACTAAACGG GTCGTTACA 92665 |||||||| | ||||||||| GACTAAACAG GTCGTTACA 556 hqPGS_C10HBa0115K16.1-_SGN-E550065+ (93219 92665) ******************************************************************************** EST sequence 130 +strand 732 n (File: SGN-E550201+) 1 ATCGATTCTC CTTCTCTCTC TTTCTGTTCT TTTCTTTTTC TTATTCAAAC CCTCCTTCTT 61 TTACCCTAAT TAGCATATAA TTAAGAATAA AAGATGGAAT AATAACCCAC TAATTTACTC 121 AAGGTTACCT CTTTTAACCC CCAGGTAATT AGACTTATTA ACATAAACCC ACTAACTTTA 181 TAATTAAAGT AGGAATAGTC CAAAACGTCC CTTAAAACGT GTAAAGAAAT CCGACCCAGA 241 CTGGGATTAC GCAACCTGTG ATGGCCCGTC GTGCCTGCGA CGGTCCGTCC TGCAGGTCGT 301 CGCAAGGTTC AGAGACTCAA TTTCCACCAA AGAGTCTGTG ACGGTCCGTC ACGCCCGTGA 361 CGGTCCGTCG TGCCATTCCG TTACGAAGTT CAGAGAGTCG ATTTTTAGTA CCCAATTTCA 421 GAATTTCTAA GTGTTTTGAA ACGAGACTCC TCGACGGTCC ATCGTGCTCA TGACGGTCCG 481 TCGTGGGTTC CGTCGTCTCA ACCTGTTTTT CCAAAAATAA AATCTGCTAC TCAAAACGAC 541 TAAACAGGTC GTTACATTTA TGTTCTTCCT ACTTAAATAT TATTATTATT TTACGATTTA 601 TAACACTATT AGAAACAAAG ATTTTCTCNA CCATGAATTA ATGAAAAAAT TATGCCATAA 661 AATATAAAAA ATTTACTCAT TTTTCATTGA GCTAATTCAT AAAAAAAAAA AAAAAAAACT 721 CGAGGGGGGG CC Predicted gene structure (within gDNA segment 94317 to 89260): Exon 1 93219 92665 ( 555 n); cDNA 2 556 ( 555 n); score: 0.849 PPA cDNA 699 718 MATCH C10HBa0115K16.1- SGN-E550201+ 0.849 555 0.758 C PGS_C10HBa0115K16.1-_SGN-E550201+ (93219 92665) Alignment (genomic DNA sequence = upper lines): TCGATTCTCC CTCTCTCTCT TGTTCTT-TC TATTTTCT-T TATTCCAACC CTATTTCTTT 93162 |||||||||| ||||||||| | | || | | ||| | | ||||| |||| || |||||| TCGATTCTCC TTCTCTCTCT TTCTGTTCTT TTCTTTTTCT TATTCAAACC CTCCTTCTTT 61 TACCCTAATT AGTATATAAT TAAGAATAAA AGATGGCAAT AATACCCCAC TAATTAACTT 93102 |||||||||| || ||||||| |||||||||| |||||| ||| |||| ||||| ||||| ||| TACCCTAATT AGCATATAAT TAAGAATAAA AGATGG-AAT AATAACCCAC TAATTTACTC 120 AGGGTTACCT CTTTTAACCC CTCAAG-AAT TTGAGTTATT AATATAAACC CACGAACTTT 93043 | |||||||| |||||||||| | || | ||| | || ||||| || ||||||| ||| |||||| AAGGTTACCT CTTTTAACCC C-CAGGTAAT TAGACTTATT AACATAAACC CACTAACTTT 179 ATAATTAAGG CAAGAATAGT CAAAAACGTC CCTTAAAACT TAACCAGAAA TCCGACTCTG 92983 |||||||| | | ||||||| | |||||||| ||||||||| | ||||| |||||| | | ATAATTAAAG TAGGAATAGT CCAAAACGTC CCTTAAAACG TGTAAAGAAA TCCGACCCAG 239 CCTGGGATTT GCACAACCTG TGACGGGCCG TCGTGCCTGC GACGGTCCGT CCTGCAGGTC 92923 |||||| || | ||||||| ||| || ||| |||||||||| |||||||||| |||||||||| ACTGGGA-TT ACGCAACCTG TGATGGCCCG TCGTGCCTGC GACGGTCCGT CCTGCAGGTC 298 GTCGTAGAGT TCAGAGACCC AAATTTCCAC C-AAGGGTCT GTGACGGTCC GTCACACCTG 92864 |||| | || |||||||| | ||||||||| | ||| |||| |||||||||| ||||| || | GTCGCAAGGT TCAGAGACTC -AATTTCCAC CAAAGAGTCT GTGACGGTCC GTCACGCCCG 357 TGACGGTCCG TCCTTCCATT CCGTCACAAA GTTCAGAGAG TCGATTTTTA GTACCCAATT 92804 |||||||||| || | ||||| |||| || || |||||||||| |||||||||| |||||||||| TGACGGTCCG TCGTGCCATT CCGTTACGAA GTTCAGAGAG TCGATTTTTA GTACCCAATT 417 TCAGATTTTC TAAGTGTTTT GAAATGAGAC CCTGCGACAG TCCGTCGTGC CCATGACGGT 92744 ||||| |||| |||||||||| |||| ||||| | |||| | ||| |||||| ||||||||| TCAGAATTTC TAAGTGTTTT GAAACGAGAC TCCTCGACGG TCCATCGTGC TCATGACGGT 477 CCGTCATGGG GTTCGTCGCT TCTGCCAGTT TTTCCAGAAA TAAAGTCTGC CGCTCAAAAT 92684 ||||| |||| | ||||| || || ||| |||||| ||| |||| ||||| ||||||| CCGTCGTGGG TTCCGTCGTC TCAACCTGTT TTTCCAAAAA TAAAATCTGC TACTCAAAAC 537 GACTAAACGG GTCGTTACA 92665 |||||||| | ||||||||| GACTAAACAG GTCGTTACA 556 hqPGS_C10HBa0115K16.1-_SGN-E550201+ (93219 92665) ******************************************************************************** EST sequence 132 +strand 709 n (File: SGN-E550207+) 1 ATCGATTCTC CTTCTCTCTC TTTCTGTTCT TTTCTTTTTC TTATTCAAAC CCTCCTTCTT 61 TTACCCTAAT TAGCATATAA TTAAGAATAA AAGATGGAAT AATAACCCAC TAATTTACTC 121 AAGGTTACCT CTTTTAACCC CCAGGTAATT AGACTTATTA ACATAAACCC ACTAACTTTA 181 TAATTAAAGT AGGAATAGTC CAAAACGTCC CTTAAAACGT GTAAAGAAAT CCGACCCAGA 241 CTGGGATTAC GCAACCTGTG ATGGCCCGTC GTGCCTGCGA CGGTCCGTCC TGCAGGTCGT 301 CGCAAGGTTC AGAGACTCAA TTTCCACCAA AGAGTCTGTG ACGGTCCGTC ACGCCCGTGA 361 CGGTCCGTCG TGCCATTCCG TTACGAAGTT CAGAGAGTCG ATTTTTAGTA CCCAATTTCA 421 GAATTTCTAA GTGTTTTGAA ACGAGACTCC TCGACGGTCC ATCGTGCTCA TGACGGTCCG 481 TCGTGGGTTC CGTCGTCTCA ACCTGTTTTT CCAAAAATAA AATCTGCTAC TCAAAACGAC 541 TAAACAGGTC GTTACATTTA TGTTCTTCCT ACTTAAATAT TATTATTATT TTACGATTTA 601 TAACACTATT AGAAACAAAG ATTTTCTNCA CCATGAATTA ATGAAAAAAT TATGCCATAA 661 AATATAAAAA ATTTACTCAT TTTTCATTGA GCTAATTCAT AAAAAAAAA Predicted gene structure (within gDNA segment 94317 to 89490): Exon 1 93219 92665 ( 555 n); cDNA 2 556 ( 555 n); score: 0.849 PPA cDNA 699 709 MATCH C10HBa0115K16.1- SGN-E550207+ 0.849 555 0.783 C PGS_C10HBa0115K16.1-_SGN-E550207+ (93219 92665) Alignment (genomic DNA sequence = upper lines): TCGATTCTCC CTCTCTCTCT TGTTCTT-TC TATTTTCT-T TATTCCAACC CTATTTCTTT 93162 |||||||||| ||||||||| | | || | | ||| | | ||||| |||| || |||||| TCGATTCTCC TTCTCTCTCT TTCTGTTCTT TTCTTTTTCT TATTCAAACC CTCCTTCTTT 61 TACCCTAATT AGTATATAAT TAAGAATAAA AGATGGCAAT AATACCCCAC TAATTAACTT 93102 |||||||||| || ||||||| |||||||||| |||||| ||| |||| ||||| ||||| ||| TACCCTAATT AGCATATAAT TAAGAATAAA AGATGG-AAT AATAACCCAC TAATTTACTC 120 AGGGTTACCT CTTTTAACCC CTCAAG-AAT TTGAGTTATT AATATAAACC CACGAACTTT 93043 | |||||||| |||||||||| | || | ||| | || ||||| || ||||||| ||| |||||| AAGGTTACCT CTTTTAACCC C-CAGGTAAT TAGACTTATT AACATAAACC CACTAACTTT 179 ATAATTAAGG CAAGAATAGT CAAAAACGTC CCTTAAAACT TAACCAGAAA TCCGACTCTG 92983 |||||||| | | ||||||| | |||||||| ||||||||| | ||||| |||||| | | ATAATTAAAG TAGGAATAGT CCAAAACGTC CCTTAAAACG TGTAAAGAAA TCCGACCCAG 239 CCTGGGATTT GCACAACCTG TGACGGGCCG TCGTGCCTGC GACGGTCCGT CCTGCAGGTC 92923 |||||| || | ||||||| ||| || ||| |||||||||| |||||||||| |||||||||| ACTGGGA-TT ACGCAACCTG TGATGGCCCG TCGTGCCTGC GACGGTCCGT CCTGCAGGTC 298 GTCGTAGAGT TCAGAGACCC AAATTTCCAC C-AAGGGTCT GTGACGGTCC GTCACACCTG 92864 |||| | || |||||||| | ||||||||| | ||| |||| |||||||||| ||||| || | GTCGCAAGGT TCAGAGACTC -AATTTCCAC CAAAGAGTCT GTGACGGTCC GTCACGCCCG 357 TGACGGTCCG TCCTTCCATT CCGTCACAAA GTTCAGAGAG TCGATTTTTA GTACCCAATT 92804 |||||||||| || | ||||| |||| || || |||||||||| |||||||||| |||||||||| TGACGGTCCG TCGTGCCATT CCGTTACGAA GTTCAGAGAG TCGATTTTTA GTACCCAATT 417 TCAGATTTTC TAAGTGTTTT GAAATGAGAC CCTGCGACAG TCCGTCGTGC CCATGACGGT 92744 ||||| |||| |||||||||| |||| ||||| | |||| | ||| |||||| ||||||||| TCAGAATTTC TAAGTGTTTT GAAACGAGAC TCCTCGACGG TCCATCGTGC TCATGACGGT 477 CCGTCATGGG GTTCGTCGCT TCTGCCAGTT TTTCCAGAAA TAAAGTCTGC CGCTCAAAAT 92684 ||||| |||| | ||||| || || ||| |||||| ||| |||| ||||| ||||||| CCGTCGTGGG TTCCGTCGTC TCAACCTGTT TTTCCAAAAA TAAAATCTGC TACTCAAAAC 537 GACTAAACGG GTCGTTACA 92665 |||||||| | ||||||||| GACTAAACAG GTCGTTACA 556 hqPGS_C10HBa0115K16.1-_SGN-E550207+ (93219 92665) ******************************************************************************** EST sequence 134 +strand 715 n (File: SGN-E550335+) 1 ATCGATTCTC CTTCTCTCTC TTTCTGTTCT TTTCTTTTTC TTATTCAACC CTCCTTCTTT 61 TACCCTAATT AGCATATAAT TAAGAATAAA AGATGGAATA ATAACCCACT AATTTACTCA 121 AGGTTACCTC TTTTAACCCC CAGGTAATTA GACTTATTAA CATAAACCCA CTAACTTTAT 181 AATTAAAGTA GGAATAGTCC AAAACGTCCC TTAAAACGTG TAAAGAAATC CGACCCAGAC 241 TGGGATTACG CAACCTGTGA TGGCCCGTCG TGCCTGCGAC GGTCCGTCCT GCAGGTCGTC 301 GCAAGGTTCA GAGACTCAAT TTCCACCAAA GAATCTGTGA CGGTCCGTCA CGCCCGTGAC 361 GGTCCGTCGT GCCATTCCGT TACGAAGTTC AGAGAGTCGA TTTTTAGTAC CCAATTTCAG 421 AATTTCTAAG TGTTTTGAAA CGAGACTCCT CGACGGTCCA TCGTGCTCAT GACGGTCCGT 481 CGTGGGTTCC GTCGTCTCAA CCTGTTTTTC CAAAAATAAA ATCTGCTACT CAAAACGACT 541 AAACAGGTCG TTACATTTAT GTTCTTCCTA CTTAAATATT ATTATTATTT TACGATTTAT 601 AACACTATTA GAAACAAAGA TTTTCTCNAC CATGAATTAA TGAAAAAATT ATGCCATAAA 661 ATATAAAAAA TTTACTCATT TTTCATTGAG CTAATTCATA AAAAAAAAAA AAAAA Predicted gene structure (within gDNA segment 94307 to 89420): Exon 1 93219 92665 ( 555 n); cDNA 2 555 ( 554 n); score: 0.846 PPA cDNA 698 715 MATCH C10HBa0115K16.1- SGN-E550335+ 0.846 555 0.776 C PGS_C10HBa0115K16.1-_SGN-E550335+ (93219 92665) Alignment (genomic DNA sequence = upper lines): TCGATTCTCC CTCTCTCTCT TGTTCTT-TC TATTTTCTTT ATTCCAACCC TATTTCTTTT 93161 |||||||||| ||||||||| | | || | | ||| | | | |||||| | ||||||| TCGATTCTCC TTCTCTCTCT TTCTGTTCTT TTCTTTTTCT TATTCAACCC TCCTTCTTTT 61 ACCCTAATTA GTATATAATT AAGAATAAAA GATGGCAATA ATACCCCACT AATTAACTTA 93101 |||||||||| | |||||||| |||||||||| ||||| |||| ||| |||||| |||| ||| | ACCCTAATTA GCATATAATT AAGAATAAAA GATGG-AATA ATAACCCACT AATTTACTCA 120 GGGTTACCTC TTTTAACCCC TCAAG-AATT TGAGTTATTA ATATAAACCC ACGAACTTTA 93042 ||||||||| |||||||||| || | |||| || |||||| | |||||||| || ||||||| AGGTTACCTC TTTTAACCCC -CAGGTAATT AGACTTATTA ACATAAACCC ACTAACTTTA 179 TAATTAAGGC AAGAATAGTC AAAAACGTCC CTTAAAACTT AACCAGAAAT CCGACTCTGC 92982 ||||||| | | |||||||| ||||||||| |||||||| | |||||| ||||| | | TAATTAAAGT AGGAATAGTC CAAAACGTCC CTTAAAACGT GTAAAGAAAT CCGACCCAGA 239 CTGGGATTTG CACAACCTGT GACGGGCCGT CGTGCCTGCG ACGGTCCGTC CTGCAGGTCG 92922 |||||| || | |||||||| || || |||| |||||||||| |||||||||| |||||||||| CTGGGA-TTA CGCAACCTGT GATGGCCCGT CGTGCCTGCG ACGGTCCGTC CTGCAGGTCG 298 TCGTAGAGTT CAGAGACCCA AATTTCCACC -AAGGGTCTG TGACGGTCCG TCACACCTGT 92863 ||| | ||| ||||||| | |||||||||| ||| |||| |||||||||| |||| || || TCGCAAGGTT CAGAGACTC- AATTTCCACC AAAGAATCTG TGACGGTCCG TCACGCCCGT 357 GACGGTCCGT CCTTCCATTC CGTCACAAAG TTCAGAGAGT CGATTTTTAG TACCCAATTT 92803 |||||||||| | | |||||| ||| || ||| |||||||||| |||||||||| |||||||||| GACGGTCCGT CGTGCCATTC CGTTACGAAG TTCAGAGAGT CGATTTTTAG TACCCAATTT 417 CAGATTTTCT AAGTGTTTTG AAATGAGACC CTGCGACAGT CCGTCGTGCC CATGACGGTC 92743 |||| ||||| |||||||||| ||| ||||| | |||| || || |||||| |||||||||| CAGAATTTCT AAGTGTTTTG AAACGAGACT CCTCGACGGT CCATCGTGCT CATGACGGTC 477 CGTCATGGGG TTCGTCGCTT CTGCCAGTTT TTCCAGAAAT AAAGTCTGCC GCTCAAAATG 92683 |||| |||| | ||||| | | || |||| ||||| |||| ||| ||||| ||||||| | CGTCGTGGGT TCCGTCGTCT CAACCTGTTT TTCCAAAAAT AAAATCTGCT ACTCAAAACG 537 ACTAAACGGG TCGTTACA 92665 ||||||| || |||||||| ACTAAACAGG TCGTTACA 555 hqPGS_C10HBa0115K16.1-_SGN-E550335+ (93219 92665) ******************************************************************************** EST sequence 153 +strand 714 n (File: SGN-E390013+) 1 ATCGATTCTC CTTCTCTCTC TTTCTGTTCT TTTCTTTTTC TTATTCAAAC CCTCCTTCTT 61 TTACCCTAAT TAGCATATAA TTAAGAATAA AAGATGGAAT AATAACCCAC TAATTTACTC 121 AAGGTTACCT CTTTTAACCC CCAGGTAATT AGACTTATTA ACATAAACCC ACTAACTTTA 181 TAATTAAAGT AGGAATAGTC CAAAACGTCC CTTAAAACGT GTAAAGAAAT CCGACCCAGA 241 CTGGGATTAC GCAACCTGTG ATGGCCCGTC GTGCCTGCGA CGGTCCGTCC TGCAGGTCGT 301 CGCAAGGTTC AGAGACTCAA TTTCCACCAA AGAGTCTGTG ACGGTCCGTC ACGCCCGTGA 361 CGGTCCGTCG TGCCATTCCG TTACGAAGTT CAGAGAGTCG ATTTTTAGTA CCCAATTTCA 421 GAATTTCTAA GTGTTTTGAA ACGAGACTCC TCGACGGTCC ATCGTGCTCA TGACGGTCCG 481 TCGTGGGTTC CGTCGTCTCA ACCTGTTTTT CCAAAAATAA AATCTGCTAC TCAAAACGAC 541 TAAACAGGTC GTTACATTTA TGTTCTTCCT ACTTAAATAT TATTATTATT TTACGATTTA 601 TAACACTATT AGAAACNAAG ATTTTCTCAA CCATGAATTA ATGAAAAAAT TATGCCATAA 661 AATATAAAAA ATTTACTCAT TTTTCATTGA GCTAATTCAT AAAAAAAAAA AAAA Predicted gene structure (within gDNA segment 94317 to 89440): Exon 1 93219 92665 ( 555 n); cDNA 2 556 ( 555 n); score: 0.849 PPA cDNA 699 714 MATCH C10HBa0115K16.1- SGN-E390013+ 0.849 555 0.777 C PGS_C10HBa0115K16.1-_SGN-E390013+ (93219 92665) Alignment (genomic DNA sequence = upper lines): TCGATTCTCC CTCTCTCTCT TGTTCTT-TC TATTTTCT-T TATTCCAACC CTATTTCTTT 93162 |||||||||| ||||||||| | | || | | ||| | | ||||| |||| || |||||| TCGATTCTCC TTCTCTCTCT TTCTGTTCTT TTCTTTTTCT TATTCAAACC CTCCTTCTTT 61 TACCCTAATT AGTATATAAT TAAGAATAAA AGATGGCAAT AATACCCCAC TAATTAACTT 93102 |||||||||| || ||||||| |||||||||| |||||| ||| |||| ||||| ||||| ||| TACCCTAATT AGCATATAAT TAAGAATAAA AGATGG-AAT AATAACCCAC TAATTTACTC 120 AGGGTTACCT CTTTTAACCC CTCAAG-AAT TTGAGTTATT AATATAAACC CACGAACTTT 93043 | |||||||| |||||||||| | || | ||| | || ||||| || ||||||| ||| |||||| AAGGTTACCT CTTTTAACCC C-CAGGTAAT TAGACTTATT AACATAAACC CACTAACTTT 179 ATAATTAAGG CAAGAATAGT CAAAAACGTC CCTTAAAACT TAACCAGAAA TCCGACTCTG 92983 |||||||| | | ||||||| | |||||||| ||||||||| | ||||| |||||| | | ATAATTAAAG TAGGAATAGT CCAAAACGTC CCTTAAAACG TGTAAAGAAA TCCGACCCAG 239 CCTGGGATTT GCACAACCTG TGACGGGCCG TCGTGCCTGC GACGGTCCGT CCTGCAGGTC 92923 |||||| || | ||||||| ||| || ||| |||||||||| |||||||||| |||||||||| ACTGGGA-TT ACGCAACCTG TGATGGCCCG TCGTGCCTGC GACGGTCCGT CCTGCAGGTC 298 GTCGTAGAGT TCAGAGACCC AAATTTCCAC C-AAGGGTCT GTGACGGTCC GTCACACCTG 92864 |||| | || |||||||| | ||||||||| | ||| |||| |||||||||| ||||| || | GTCGCAAGGT TCAGAGACTC -AATTTCCAC CAAAGAGTCT GTGACGGTCC GTCACGCCCG 357 TGACGGTCCG TCCTTCCATT CCGTCACAAA GTTCAGAGAG TCGATTTTTA GTACCCAATT 92804 |||||||||| || | ||||| |||| || || |||||||||| |||||||||| |||||||||| TGACGGTCCG TCGTGCCATT CCGTTACGAA GTTCAGAGAG TCGATTTTTA GTACCCAATT 417 TCAGATTTTC TAAGTGTTTT GAAATGAGAC CCTGCGACAG TCCGTCGTGC CCATGACGGT 92744 ||||| |||| |||||||||| |||| ||||| | |||| | ||| |||||| ||||||||| TCAGAATTTC TAAGTGTTTT GAAACGAGAC TCCTCGACGG TCCATCGTGC TCATGACGGT 477 CCGTCATGGG GTTCGTCGCT TCTGCCAGTT TTTCCAGAAA TAAAGTCTGC CGCTCAAAAT 92684 ||||| |||| | ||||| || || ||| |||||| ||| |||| ||||| ||||||| CCGTCGTGGG TTCCGTCGTC TCAACCTGTT TTTCCAAAAA TAAAATCTGC TACTCAAAAC 537 GACTAAACGG GTCGTTACA 92665 |||||||| | ||||||||| GACTAAACAG GTCGTTACA 556 hqPGS_C10HBa0115K16.1-_SGN-E390013+ (93219 92665) ******************************************************************************** EST sequence 155 +strand 720 n (File: SGN-E389834+) 1 ATCGATTCTC CTTCTCTCTC TTTCTGTTCT TTTCTTTTTC TTATTCAAAC CCTCCTTCTT 61 TTACCCTAAT TAGCATATAA TTAAGAATAA AAGATGGAAT AATAACCCAC TAATTTACTC 121 AAGGTTACCT CTTTTAACCC CCAGGTAATT AGACTTATTA ACATAAACCC ACTAACTTTA 181 TAATTAAAGT AGGAATAGTC CAAAACGTCC CTTAAAACGT GTAAAGAAAT CCGACCCAGA 241 CTGGGATTAC GCAACCTGTG ATGGCCCGTC GTGCCTGCGA CGGTCCGTCC TGCAGGTCGT 301 CGCAAGGTTC AGAGACTCAA TTTCCACCAA AGAGTCTGTG ACGGTCCGTC ACGCCCGTGA 361 CGGTCCGTCG TGCCATTCCG TTACGAAGTT CAGAGAGTCG ATTTTTAGTA CCCAATTTCA 421 GAATTTCTAA GTGTTTTGAA ACGAGACTCC TCGACGGTCC ATCGTGCTCA TGACGGTCCG 481 TCGTGGGTTA CGTCGACTCA ACCTGTTTTT CCAAAAATAA AATCTGCTAC TCAGAACGAC 541 TAAACAGGAC GTTACATTTA TGATCGTCCT ACTTAAATAT CATTATTATT TTACGATTTA 601 TAACACTATT AGAAACGAAG ATTTTCTCGA CCATGAATTA ATGAAAAAAT ATGCCATGAA 661 ATATAAAAAT TTACTCGTTC TTCATTGAGC TATTCGTGAA AAAAAAAAAA AAATCGAGGG Predicted gene structure (within gDNA segment 94317 to 89380): Exon 1 93219 92665 ( 555 n); cDNA 2 556 ( 555 n); score: 0.845 PPA cDNA 699 714 MATCH C10HBa0115K16.1- SGN-E389834+ 0.845 555 0.771 C PGS_C10HBa0115K16.1-_SGN-E389834+ (93219 92665) Alignment (genomic DNA sequence = upper lines): TCGATTCTCC CTCTCTCTCT TGTTCTT-TC TATTTTCT-T TATTCCAACC CTATTTCTTT 93162 |||||||||| ||||||||| | | || | | ||| | | ||||| |||| || |||||| TCGATTCTCC TTCTCTCTCT TTCTGTTCTT TTCTTTTTCT TATTCAAACC CTCCTTCTTT 61 TACCCTAATT AGTATATAAT TAAGAATAAA AGATGGCAAT AATACCCCAC TAATTAACTT 93102 |||||||||| || ||||||| |||||||||| |||||| ||| |||| ||||| ||||| ||| TACCCTAATT AGCATATAAT TAAGAATAAA AGATGG-AAT AATAACCCAC TAATTTACTC 120 AGGGTTACCT CTTTTAACCC CTCAAG-AAT TTGAGTTATT AATATAAACC CACGAACTTT 93043 | |||||||| |||||||||| | || | ||| | || ||||| || ||||||| ||| |||||| AAGGTTACCT CTTTTAACCC C-CAGGTAAT TAGACTTATT AACATAAACC CACTAACTTT 179 ATAATTAAGG CAAGAATAGT CAAAAACGTC CCTTAAAACT TAACCAGAAA TCCGACTCTG 92983 |||||||| | | ||||||| | |||||||| ||||||||| | ||||| |||||| | | ATAATTAAAG TAGGAATAGT CCAAAACGTC CCTTAAAACG TGTAAAGAAA TCCGACCCAG 239 CCTGGGATTT GCACAACCTG TGACGGGCCG TCGTGCCTGC GACGGTCCGT CCTGCAGGTC 92923 |||||| || | ||||||| ||| || ||| |||||||||| |||||||||| |||||||||| ACTGGGA-TT ACGCAACCTG TGATGGCCCG TCGTGCCTGC GACGGTCCGT CCTGCAGGTC 298 GTCGTAGAGT TCAGAGACCC AAATTTCCAC C-AAGGGTCT GTGACGGTCC GTCACACCTG 92864 |||| | || |||||||| | ||||||||| | ||| |||| |||||||||| ||||| || | GTCGCAAGGT TCAGAGACTC -AATTTCCAC CAAAGAGTCT GTGACGGTCC GTCACGCCCG 357 TGACGGTCCG TCCTTCCATT CCGTCACAAA GTTCAGAGAG TCGATTTTTA GTACCCAATT 92804 |||||||||| || | ||||| |||| || || |||||||||| |||||||||| |||||||||| TGACGGTCCG TCGTGCCATT CCGTTACGAA GTTCAGAGAG TCGATTTTTA GTACCCAATT 417 TCAGATTTTC TAAGTGTTTT GAAATGAGAC CCTGCGACAG TCCGTCGTGC CCATGACGGT 92744 ||||| |||| |||||||||| |||| ||||| | |||| | ||| |||||| ||||||||| TCAGAATTTC TAAGTGTTTT GAAACGAGAC TCCTCGACGG TCCATCGTGC TCATGACGGT 477 CCGTCATGGG GTTCGTCGCT TCTGCCAGTT TTTCCAGAAA TAAAGTCTGC CGCTCAAAAT 92684 ||||| |||| | ||||| || || ||| |||||| ||| |||| ||||| |||| || CCGTCGTGGG TTACGTCGAC TCAACCTGTT TTTCCAAAAA TAAAATCTGC TACTCAGAAC 537 GACTAAACGG GTCGTTACA 92665 |||||||| | | ||||||| GACTAAACAG GACGTTACA 556 hqPGS_C10HBa0115K16.1-_SGN-E389834+ (93219 92665) ******************************************************************************** EST sequence 158 +strand 717 n (File: SGN-E550484+) 1 ATCGATTCTC CTTCTCTCTC TTTCTGTTCT TTTCTTTTTC TTATTCAAAC CCTCCTTCTT 61 TTACCCTAAT TAGCATATAA TTAAGAATAA AAGATGGAAT AATAACCCAC TAATTTACTC 121 AAGGTTACCT CTTTTAACCC CCAGGTAATT AGACTTATTA ACATAAACCC ACTAACTTTA 181 TAATTAAAGT AGGAATAGTC CAAAACGTCC CTTAAAACGT GTAAAGAAAT CCGACCCAGA 241 CTGGGATTAC GCAACCTGTG ATGGCCCGTC GTGCCTGCGA CGGTCCGTCC TGCAGGTCGT 301 CGCAAGGTTC AGAGACTCAA TTTCCACCAA AGAGTCTGTG ACGGTCCGTC ACGCCCGTGA 361 CGGTCCGTCG TGCCATTCCG TTACGAAGTT CAGAGAGTCG ATTTTTAGTA CCCAATTTCA 421 GAATTTCTAA GTGTTTTGAA ACGAGACTCC TCGACGGTCC ATCGTGCTCA TGACGGTCCG 481 TCGTGGGTTC CGTCGTCTCA ACCTGTTTTT CCAAAAATAA AATCTGCTAC TCAAAACGAC 541 TAAACAGGTC GTTACATTTA TGTTCTTCCT ACTTAAATAT TATTATTATT TTACGATTTA 601 TAACACTATT AGAAACAAAG ATTTTCTCAA CCATGAATTA ATGAAAAAAT TATGCCATAA 661 AATATAAAAA ATTTACTCAT TTTTCATTGA GCTAATTCAT AAAAAAAAAA AAAAAAA Predicted gene structure (within gDNA segment 94317 to 89410): Exon 1 93219 92665 ( 555 n); cDNA 2 556 ( 555 n); score: 0.849 PPA cDNA 699 717 MATCH C10HBa0115K16.1- SGN-E550484+ 0.849 555 0.774 C PGS_C10HBa0115K16.1-_SGN-E550484+ (93219 92665) Alignment (genomic DNA sequence = upper lines): TCGATTCTCC CTCTCTCTCT TGTTCTT-TC TATTTTCT-T TATTCCAACC CTATTTCTTT 93162 |||||||||| ||||||||| | | || | | ||| | | ||||| |||| || |||||| TCGATTCTCC TTCTCTCTCT TTCTGTTCTT TTCTTTTTCT TATTCAAACC CTCCTTCTTT 61 TACCCTAATT AGTATATAAT TAAGAATAAA AGATGGCAAT AATACCCCAC TAATTAACTT 93102 |||||||||| || ||||||| |||||||||| |||||| ||| |||| ||||| ||||| ||| TACCCTAATT AGCATATAAT TAAGAATAAA AGATGG-AAT AATAACCCAC TAATTTACTC 120 AGGGTTACCT CTTTTAACCC CTCAAG-AAT TTGAGTTATT AATATAAACC CACGAACTTT 93043 | |||||||| |||||||||| | || | ||| | || ||||| || ||||||| ||| |||||| AAGGTTACCT CTTTTAACCC C-CAGGTAAT TAGACTTATT AACATAAACC CACTAACTTT 179 ATAATTAAGG CAAGAATAGT CAAAAACGTC CCTTAAAACT TAACCAGAAA TCCGACTCTG 92983 |||||||| | | ||||||| | |||||||| ||||||||| | ||||| |||||| | | ATAATTAAAG TAGGAATAGT CCAAAACGTC CCTTAAAACG TGTAAAGAAA TCCGACCCAG 239 CCTGGGATTT GCACAACCTG TGACGGGCCG TCGTGCCTGC GACGGTCCGT CCTGCAGGTC 92923 |||||| || | ||||||| ||| || ||| |||||||||| |||||||||| |||||||||| ACTGGGA-TT ACGCAACCTG TGATGGCCCG TCGTGCCTGC GACGGTCCGT CCTGCAGGTC 298 GTCGTAGAGT TCAGAGACCC AAATTTCCAC C-AAGGGTCT GTGACGGTCC GTCACACCTG 92864 |||| | || |||||||| | ||||||||| | ||| |||| |||||||||| ||||| || | GTCGCAAGGT TCAGAGACTC -AATTTCCAC CAAAGAGTCT GTGACGGTCC GTCACGCCCG 357 TGACGGTCCG TCCTTCCATT CCGTCACAAA GTTCAGAGAG TCGATTTTTA GTACCCAATT 92804 |||||||||| || | ||||| |||| || || |||||||||| |||||||||| |||||||||| TGACGGTCCG TCGTGCCATT CCGTTACGAA GTTCAGAGAG TCGATTTTTA GTACCCAATT 417 TCAGATTTTC TAAGTGTTTT GAAATGAGAC CCTGCGACAG TCCGTCGTGC CCATGACGGT 92744 ||||| |||| |||||||||| |||| ||||| | |||| | ||| |||||| ||||||||| TCAGAATTTC TAAGTGTTTT GAAACGAGAC TCCTCGACGG TCCATCGTGC TCATGACGGT 477 CCGTCATGGG GTTCGTCGCT TCTGCCAGTT TTTCCAGAAA TAAAGTCTGC CGCTCAAAAT 92684 ||||| |||| | ||||| || || ||| |||||| ||| |||| ||||| ||||||| CCGTCGTGGG TTCCGTCGTC TCAACCTGTT TTTCCAAAAA TAAAATCTGC TACTCAAAAC 537 GACTAAACGG GTCGTTACA 92665 |||||||| | ||||||||| GACTAAACAG GTCGTTACA 556 hqPGS_C10HBa0115K16.1-_SGN-E550484+ (93219 92665) ******************************************************************************** EST sequence 160 +strand 713 n (File: SGN-E550211+) 1 ATCGATTCTC CTTCTCTCTC TTTCTGTTCT TTTCTTTTTC TTATTCAACC CTCCTTCTTT 61 TACCCTAATT AGCATATAAT TAAGAATAAA AGATGGAATA ATAACCCACT AATTTACTCA 121 AGGTTACCTC TTTTAACCCC CAGGTAATTA GACTTATTAA CATAAACCCA CTAACTTTAT 181 AATTAAAGTA GGAATAGTCC AAAACGTCCC TTAAAACGTG TAAAGAAATC CGACCCAGAC 241 TGGGATTACG CAACCTGTGA TGGCCCGTCG TGCCTGCGAC GGTCCGTCCT GCAGGTCGTC 301 GCAAGGTTCA GAGACTCAAT TTCCACCAAA GAGTCTGTGA CGGTCCGTCA CGCCCGTGAC 361 GGTCCGTCGT GCCATTCCGT TACGAAGTTC AGAGAGTCGA TTTTTAGTAC CCAATTTCAG 421 AATTTCTAAG TGTTTTGAAA CGAGACTCCT CGACGGTCCA TCGTGCTCAT GACGGTCCGT 481 CGTGGGTTCC GTCGTCTCAA CCTGTTTTTC CAAAAATAAA ATCTGCTACT CAAAACGACT 541 AAACAGGTCG TTACATTTAT GTTCTTCCTA CTTAAATATT ATTATTATTT TACGATTTAT 601 AACACTATTA GAAACAAAGA TTTTCTCAAC CATGAATTAA TGAAAAAATT ATGCCATAAA 661 ATATAAAAAA TTTACTCATT TTTCATTGAG CTAATTCATA AAAAAAAAAA AAA Predicted gene structure (within gDNA segment 94307 to 89440): Exon 1 93219 92665 ( 555 n); cDNA 2 555 ( 554 n); score: 0.848 PPA cDNA 698 713 MATCH C10HBa0115K16.1- SGN-E550211+ 0.848 555 0.778 C PGS_C10HBa0115K16.1-_SGN-E550211+ (93219 92665) Alignment (genomic DNA sequence = upper lines): TCGATTCTCC CTCTCTCTCT TGTTCTT-TC TATTTTCTTT ATTCCAACCC TATTTCTTTT 93161 |||||||||| ||||||||| | | || | | ||| | | | |||||| | ||||||| TCGATTCTCC TTCTCTCTCT TTCTGTTCTT TTCTTTTTCT TATTCAACCC TCCTTCTTTT 61 ACCCTAATTA GTATATAATT AAGAATAAAA GATGGCAATA ATACCCCACT AATTAACTTA 93101 |||||||||| | |||||||| |||||||||| ||||| |||| ||| |||||| |||| ||| | ACCCTAATTA GCATATAATT AAGAATAAAA GATGG-AATA ATAACCCACT AATTTACTCA 120 GGGTTACCTC TTTTAACCCC TCAAG-AATT TGAGTTATTA ATATAAACCC ACGAACTTTA 93042 ||||||||| |||||||||| || | |||| || |||||| | |||||||| || ||||||| AGGTTACCTC TTTTAACCCC -CAGGTAATT AGACTTATTA ACATAAACCC ACTAACTTTA 179 TAATTAAGGC AAGAATAGTC AAAAACGTCC CTTAAAACTT AACCAGAAAT CCGACTCTGC 92982 ||||||| | | |||||||| ||||||||| |||||||| | |||||| ||||| | | TAATTAAAGT AGGAATAGTC CAAAACGTCC CTTAAAACGT GTAAAGAAAT CCGACCCAGA 239 CTGGGATTTG CACAACCTGT GACGGGCCGT CGTGCCTGCG ACGGTCCGTC CTGCAGGTCG 92922 |||||| || | |||||||| || || |||| |||||||||| |||||||||| |||||||||| CTGGGA-TTA CGCAACCTGT GATGGCCCGT CGTGCCTGCG ACGGTCCGTC CTGCAGGTCG 298 TCGTAGAGTT CAGAGACCCA AATTTCCACC -AAGGGTCTG TGACGGTCCG TCACACCTGT 92863 ||| | ||| ||||||| | |||||||||| ||| ||||| |||||||||| |||| || || TCGCAAGGTT CAGAGACTC- AATTTCCACC AAAGAGTCTG TGACGGTCCG TCACGCCCGT 357 GACGGTCCGT CCTTCCATTC CGTCACAAAG TTCAGAGAGT CGATTTTTAG TACCCAATTT 92803 |||||||||| | | |||||| ||| || ||| |||||||||| |||||||||| |||||||||| GACGGTCCGT CGTGCCATTC CGTTACGAAG TTCAGAGAGT CGATTTTTAG TACCCAATTT 417 CAGATTTTCT AAGTGTTTTG AAATGAGACC CTGCGACAGT CCGTCGTGCC CATGACGGTC 92743 |||| ||||| |||||||||| ||| ||||| | |||| || || |||||| |||||||||| CAGAATTTCT AAGTGTTTTG AAACGAGACT CCTCGACGGT CCATCGTGCT CATGACGGTC 477 CGTCATGGGG TTCGTCGCTT CTGCCAGTTT TTCCAGAAAT AAAGTCTGCC GCTCAAAATG 92683 |||| |||| | ||||| | | || |||| ||||| |||| ||| ||||| ||||||| | CGTCGTGGGT TCCGTCGTCT CAACCTGTTT TTCCAAAAAT AAAATCTGCT ACTCAAAACG 537 ACTAAACGGG TCGTTACA 92665 ||||||| || |||||||| ACTAAACAGG TCGTTACA 555 hqPGS_C10HBa0115K16.1-_SGN-E550211+ (93219 92665) ******************************************************************************** EST sequence 162 +strand 713 n (File: SGN-E550464+) 1 ATCGATTCTC CTTCTCTCTC TTTCTGTTCT TTTCTTTTTC TTATTCAAAC CCTCCTTCTT 61 TTACCCTAAT TAGCATATAA TTAAGAATAA AAGATGGAAT AATAACCCAC TAATTTACTC 121 AAGGTTACCT CTTTTAACCC CCAGGTAATT AGACTTATTA ACATAAACCC ACTAACTTTA 181 TAATTAAAGT AGGAATAGTC CAAAACGTCC CTTAAAACGT GTAAAGAAAT CCGACCCAGA 241 CTGGGATTAC GCAACCTGTG ATGGCCCGTC GTGCCTGCGA CGGTCCGTCC TGCAGGTCGT 301 CGCAAGGTTC AGAGACTCAA TTTCCACCAA AGAGTCTGTG ACGGTCCGTC ACGCCCGTGA 361 CGGTCCGTCG TGCCATTCCG TTACGAAGTT CAGAGAGTCG ATTTTTAGTA CCCAATTTCA 421 GAATTTCTAA GTGTTTTGAA ACGAGACTCC TCGACGGTCC ATCGTGCTCA TGACGGTCCG 481 TCGTGGGTTC CGTCGTCTCA ACCTGTTTTT CCAAAAATAA AATCTGCTAC TCAAAACGAC 541 TAAACAGGTC GNTACATTTA TGTTCTTCCT ACTTAAATAT TATTATTATT TTACGATTTA 601 TAACACTATT AGAAACAAAG ATTTTCTCTA CCATGAATTA ATGAAAAATT ATGCCATAAG 661 ATATAAAAAA TTTACTCATT TTTCATTGAG CTAATTCATA AAAAAAAAAA AAA Predicted gene structure (within gDNA segment 94317 to 89450): Exon 1 93219 92665 ( 555 n); cDNA 2 556 ( 555 n); score: 0.847 PPA cDNA 698 713 MATCH C10HBa0115K16.1- SGN-E550464+ 0.847 555 0.778 C PGS_C10HBa0115K16.1-_SGN-E550464+ (93219 92665) Alignment (genomic DNA sequence = upper lines): TCGATTCTCC CTCTCTCTCT TGTTCTT-TC TATTTTCT-T TATTCCAACC CTATTTCTTT 93162 |||||||||| ||||||||| | | || | | ||| | | ||||| |||| || |||||| TCGATTCTCC TTCTCTCTCT TTCTGTTCTT TTCTTTTTCT TATTCAAACC CTCCTTCTTT 61 TACCCTAATT AGTATATAAT TAAGAATAAA AGATGGCAAT AATACCCCAC TAATTAACTT 93102 |||||||||| || ||||||| |||||||||| |||||| ||| |||| ||||| ||||| ||| TACCCTAATT AGCATATAAT TAAGAATAAA AGATGG-AAT AATAACCCAC TAATTTACTC 120 AGGGTTACCT CTTTTAACCC CTCAAG-AAT TTGAGTTATT AATATAAACC CACGAACTTT 93043 | |||||||| |||||||||| | || | ||| | || ||||| || ||||||| ||| |||||| AAGGTTACCT CTTTTAACCC C-CAGGTAAT TAGACTTATT AACATAAACC CACTAACTTT 179 ATAATTAAGG CAAGAATAGT CAAAAACGTC CCTTAAAACT TAACCAGAAA TCCGACTCTG 92983 |||||||| | | ||||||| | |||||||| ||||||||| | ||||| |||||| | | ATAATTAAAG TAGGAATAGT CCAAAACGTC CCTTAAAACG TGTAAAGAAA TCCGACCCAG 239 CCTGGGATTT GCACAACCTG TGACGGGCCG TCGTGCCTGC GACGGTCCGT CCTGCAGGTC 92923 |||||| || | ||||||| ||| || ||| |||||||||| |||||||||| |||||||||| ACTGGGA-TT ACGCAACCTG TGATGGCCCG TCGTGCCTGC GACGGTCCGT CCTGCAGGTC 298 GTCGTAGAGT TCAGAGACCC AAATTTCCAC C-AAGGGTCT GTGACGGTCC GTCACACCTG 92864 |||| | || |||||||| | ||||||||| | ||| |||| |||||||||| ||||| || | GTCGCAAGGT TCAGAGACTC -AATTTCCAC CAAAGAGTCT GTGACGGTCC GTCACGCCCG 357 TGACGGTCCG TCCTTCCATT CCGTCACAAA GTTCAGAGAG TCGATTTTTA GTACCCAATT 92804 |||||||||| || | ||||| |||| || || |||||||||| |||||||||| |||||||||| TGACGGTCCG TCGTGCCATT CCGTTACGAA GTTCAGAGAG TCGATTTTTA GTACCCAATT 417 TCAGATTTTC TAAGTGTTTT GAAATGAGAC CCTGCGACAG TCCGTCGTGC CCATGACGGT 92744 ||||| |||| |||||||||| |||| ||||| | |||| | ||| |||||| ||||||||| TCAGAATTTC TAAGTGTTTT GAAACGAGAC TCCTCGACGG TCCATCGTGC TCATGACGGT 477 CCGTCATGGG GTTCGTCGCT TCTGCCAGTT TTTCCAGAAA TAAAGTCTGC CGCTCAAAAT 92684 ||||| |||| | ||||| || || ||| |||||| ||| |||| ||||| ||||||| CCGTCGTGGG TTCCGTCGTC TCAACCTGTT TTTCCAAAAA TAAAATCTGC TACTCAAAAC 537 GACTAAACGG GTCGTTACA 92665 |||||||| | |||| |||| GACTAAACAG GTCGNTACA 556 hqPGS_C10HBa0115K16.1-_SGN-E550464+ (93219 92665) ******************************************************************************** EST sequence 164 +strand 713 n (File: SGN-E549941+) 1 ATCGATTCTC CTTCTCTCTC TTTCTGTTCT TTTCTTTTTC TTATTCAAAC CCTCCTTCTT 61 TTACCCTAAT TAGCATATAA TTAAGAATAA AAGATGGAAT AATAACCCAC TAATTTACTC 121 AAGGTTACCT CTTTTAACCC CCAGGTAATT AGACTTATTA ACATAAACCC ACTAACTTTA 181 TAATTAAAGT AGGAATAGTC CAAAACGTCC CTTAAAACGT GTAAAGAAAT CCGACCCAGA 241 CTGGGATTAC GCAACCTGTG ATGGCCCGTC GTGCCTGCGA CGGTCCGTCC TGCAGGTCGT 301 CGCAAGGTTC AGAGACTCAA TTTCCACCAA AGAGTCTGTG ACGGTCCGTC ACGCCCGTGA 361 CGGTCCGTCG TGCCATTCCG TTACGAAGTT CAGAGAGTCG ATTTTTAGTA CCCAATTTCA 421 GAATTTCTAA GTGTTTTGAA ACGAGACTCC TCGACGGTCC ATCGTGCTCA TGACGGTCCG 481 TCGTGGGTTC CGTCGTCTCA ACCTGTTTTT CCAAAAATAA TATCTGCTAC TCAAAACGAC 541 TAAACAGGTC GTTACATTTA TGTTCTTCCT ACTTAAATAT TATTATTATT TTACGATTTA 601 TAACACTATT AGAAACAAAG ATTTTCTCGA CCNATGATTA ATGAAAAATT ATGCCATCAA 661 AATATAAAAA ATTTACTCAT TTTTCATTGA GCTAATTCAT AAAAAAAAAA AAA Predicted gene structure (within gDNA segment 94317 to 89450): Exon 1 93219 92665 ( 555 n); cDNA 2 556 ( 555 n); score: 0.847 PPA cDNA 699 713 MATCH C10HBa0115K16.1- SGN-E549941+ 0.847 555 0.778 C PGS_C10HBa0115K16.1-_SGN-E549941+ (93219 92665) Alignment (genomic DNA sequence = upper lines): TCGATTCTCC CTCTCTCTCT TGTTCTT-TC TATTTTCT-T TATTCCAACC CTATTTCTTT 93162 |||||||||| ||||||||| | | || | | ||| | | ||||| |||| || |||||| TCGATTCTCC TTCTCTCTCT TTCTGTTCTT TTCTTTTTCT TATTCAAACC CTCCTTCTTT 61 TACCCTAATT AGTATATAAT TAAGAATAAA AGATGGCAAT AATACCCCAC TAATTAACTT 93102 |||||||||| || ||||||| |||||||||| |||||| ||| |||| ||||| ||||| ||| TACCCTAATT AGCATATAAT TAAGAATAAA AGATGG-AAT AATAACCCAC TAATTTACTC 120 AGGGTTACCT CTTTTAACCC CTCAAG-AAT TTGAGTTATT AATATAAACC CACGAACTTT 93043 | |||||||| |||||||||| | || | ||| | || ||||| || ||||||| ||| |||||| AAGGTTACCT CTTTTAACCC C-CAGGTAAT TAGACTTATT AACATAAACC CACTAACTTT 179 ATAATTAAGG CAAGAATAGT CAAAAACGTC CCTTAAAACT TAACCAGAAA TCCGACTCTG 92983 |||||||| | | ||||||| | |||||||| ||||||||| | ||||| |||||| | | ATAATTAAAG TAGGAATAGT CCAAAACGTC CCTTAAAACG TGTAAAGAAA TCCGACCCAG 239 CCTGGGATTT GCACAACCTG TGACGGGCCG TCGTGCCTGC GACGGTCCGT CCTGCAGGTC 92923 |||||| || | ||||||| ||| || ||| |||||||||| |||||||||| |||||||||| ACTGGGA-TT ACGCAACCTG TGATGGCCCG TCGTGCCTGC GACGGTCCGT CCTGCAGGTC 298 GTCGTAGAGT TCAGAGACCC AAATTTCCAC C-AAGGGTCT GTGACGGTCC GTCACACCTG 92864 |||| | || |||||||| | ||||||||| | ||| |||| |||||||||| ||||| || | GTCGCAAGGT TCAGAGACTC -AATTTCCAC CAAAGAGTCT GTGACGGTCC GTCACGCCCG 357 TGACGGTCCG TCCTTCCATT CCGTCACAAA GTTCAGAGAG TCGATTTTTA GTACCCAATT 92804 |||||||||| || | ||||| |||| || || |||||||||| |||||||||| |||||||||| TGACGGTCCG TCGTGCCATT CCGTTACGAA GTTCAGAGAG TCGATTTTTA GTACCCAATT 417 TCAGATTTTC TAAGTGTTTT GAAATGAGAC CCTGCGACAG TCCGTCGTGC CCATGACGGT 92744 ||||| |||| |||||||||| |||| ||||| | |||| | ||| |||||| ||||||||| TCAGAATTTC TAAGTGTTTT GAAACGAGAC TCCTCGACGG TCCATCGTGC TCATGACGGT 477 CCGTCATGGG GTTCGTCGCT TCTGCCAGTT TTTCCAGAAA TAAAGTCTGC CGCTCAAAAT 92684 ||||| |||| | ||||| || || ||| |||||| ||| ||| ||||| ||||||| CCGTCGTGGG TTCCGTCGTC TCAACCTGTT TTTCCAAAAA TAATATCTGC TACTCAAAAC 537 GACTAAACGG GTCGTTACA 92665 |||||||| | ||||||||| GACTAAACAG GTCGTTACA 556 hqPGS_C10HBa0115K16.1-_SGN-E549941+ (93219 92665) ******************************************************************************** EST sequence 166 +strand 714 n (File: SGN-E550025+) 1 ATCGATTCTC CTTCTCTCTC TTTCTGTTCT TTTCTTTTTC TTATTCAAAC CCTCCTTCTT 61 TTACCCTAAT TAGCATATAA TTAAGAATAA AAGATGGAAT AATAACCCAC TAATTTACTC 121 AAGGTTACCT CTTTTAACCC CCAGGTAATT AGACTTATTA ACATAAACCC ACTAACTTTA 181 TAATTAAAGT AGGAATAGTC CAAAACGTCC CTTAAAACGT GTAAAGAAAT CCGACCCAGA 241 CTGGGATTAC GCAACCTGTG ATGGCCCGTC GTGCCTGCGA CGGTCCGTCC TGCAGGTCGT 301 CGCAAGGTTC AGAGACTCAA TTTCCACCAA AGAGTCTGTG ACGGTCCGTC ACGCCCGTGA 361 CGGTCCGTCG TGCCATTCCG TTACGAAGTT CAGAGAGTCG ATTTTTAGTA CCCAATTTCA 421 GAATTTCTAA GTGTTTTGAA ACGAGACTCC TCGACGGTCC ATCGTGCTCA TGACGGTCCG 481 TCGTGGGTTC CGTCGTCTCA ACCTGTTTTT CCAAAAATAA AATCTGCTAC TCAAAACGAC 541 TAAACAGGTC GTTACATTTA TGTTCTTCCT ACTTAAATAT TATTATTATT TTACGATTTA 601 TAACACTATT AGAAACAAAG ATTTTCTCAA CCATGAATTA ATGAAAAAAT TATGCCATAA 661 AATATAAAAA ATTTACTCAT TTTTCATTGA GCTAATTCAT AAAAAAAAAA AAAA Predicted gene structure (within gDNA segment 94317 to 89440): Exon 1 93219 92665 ( 555 n); cDNA 2 556 ( 555 n); score: 0.849 PPA cDNA 699 714 MATCH C10HBa0115K16.1- SGN-E550025+ 0.849 555 0.777 C PGS_C10HBa0115K16.1-_SGN-E550025+ (93219 92665) Alignment (genomic DNA sequence = upper lines): TCGATTCTCC CTCTCTCTCT TGTTCTT-TC TATTTTCT-T TATTCCAACC CTATTTCTTT 93162 |||||||||| ||||||||| | | || | | ||| | | ||||| |||| || |||||| TCGATTCTCC TTCTCTCTCT TTCTGTTCTT TTCTTTTTCT TATTCAAACC CTCCTTCTTT 61 TACCCTAATT AGTATATAAT TAAGAATAAA AGATGGCAAT AATACCCCAC TAATTAACTT 93102 |||||||||| || ||||||| |||||||||| |||||| ||| |||| ||||| ||||| ||| TACCCTAATT AGCATATAAT TAAGAATAAA AGATGG-AAT AATAACCCAC TAATTTACTC 120 AGGGTTACCT CTTTTAACCC CTCAAG-AAT TTGAGTTATT AATATAAACC CACGAACTTT 93043 | |||||||| |||||||||| | || | ||| | || ||||| || ||||||| ||| |||||| AAGGTTACCT CTTTTAACCC C-CAGGTAAT TAGACTTATT AACATAAACC CACTAACTTT 179 ATAATTAAGG CAAGAATAGT CAAAAACGTC CCTTAAAACT TAACCAGAAA TCCGACTCTG 92983 |||||||| | | ||||||| | |||||||| ||||||||| | ||||| |||||| | | ATAATTAAAG TAGGAATAGT CCAAAACGTC CCTTAAAACG TGTAAAGAAA TCCGACCCAG 239 CCTGGGATTT GCACAACCTG TGACGGGCCG TCGTGCCTGC GACGGTCCGT CCTGCAGGTC 92923 |||||| || | ||||||| ||| || ||| |||||||||| |||||||||| |||||||||| ACTGGGA-TT ACGCAACCTG TGATGGCCCG TCGTGCCTGC GACGGTCCGT CCTGCAGGTC 298 GTCGTAGAGT TCAGAGACCC AAATTTCCAC C-AAGGGTCT GTGACGGTCC GTCACACCTG 92864 |||| | || |||||||| | ||||||||| | ||| |||| |||||||||| ||||| || | GTCGCAAGGT TCAGAGACTC -AATTTCCAC CAAAGAGTCT GTGACGGTCC GTCACGCCCG 357 TGACGGTCCG TCCTTCCATT CCGTCACAAA GTTCAGAGAG TCGATTTTTA GTACCCAATT 92804 |||||||||| || | ||||| |||| || || |||||||||| |||||||||| |||||||||| TGACGGTCCG TCGTGCCATT CCGTTACGAA GTTCAGAGAG TCGATTTTTA GTACCCAATT 417 TCAGATTTTC TAAGTGTTTT GAAATGAGAC CCTGCGACAG TCCGTCGTGC CCATGACGGT 92744 ||||| |||| |||||||||| |||| ||||| | |||| | ||| |||||| ||||||||| TCAGAATTTC TAAGTGTTTT GAAACGAGAC TCCTCGACGG TCCATCGTGC TCATGACGGT 477 CCGTCATGGG GTTCGTCGCT TCTGCCAGTT TTTCCAGAAA TAAAGTCTGC CGCTCAAAAT 92684 ||||| |||| | ||||| || || ||| |||||| ||| |||| ||||| ||||||| CCGTCGTGGG TTCCGTCGTC TCAACCTGTT TTTCCAAAAA TAAAATCTGC TACTCAAAAC 537 GACTAAACGG GTCGTTACA 92665 |||||||| | ||||||||| GACTAAACAG GTCGTTACA 556 hqPGS_C10HBa0115K16.1-_SGN-E550025+ (93219 92665) ******************************************************************************** EST sequence 173 +strand 558 n (File: SGN-E231589+) 1 TCGATTCTCC TTCTCTCTCT TTCTGTTCTT TTCTTTTTCT TATTCAAACC CTCCTTCTTT 61 TACCCTAATT AGCATATAAT TAAGAATAAA AGATGGAATA ATAACCCACT AATTTACTCA 121 AGGTTACCTC TTTTAACCCC CAGGTAATTA GACTTATTAA CATAAACCCA CTAACTTTAT 181 AATTAAAGTA GGAATAGTCC AAAACGTCCC TTAAAACGTG TAAAGAAATC CGACCCAGAC 241 TGGGATTACG CAACCTGTGA TGGCCCGTCG TGCCTGCGAC GGTCCGTCCT GCAGGTCGTC 301 GCAAGGTTCA TAGACTCAAT TTCCACCAAA GAGTCTGTGA CGGTCCGTCA CGCCCGTGAC 361 GGTCCGTCGT GCCATTCCGT TACGAAGTTC AGAGAGTCGA TTTTTAGTAC CCAATTTCAG 421 AATTTCTAAG TGTTTTGAAA CGAGACTCCT CGACGGTCCA TCGTGCTCAT GACGGTCCGT 481 CGTGGGTTCC GTCGTCTCAA CCTGTTTTTC CAAAAATAAA ATCTGCTACT CAAAACGACT 541 AAACAGGTCG TTACATTT Predicted gene structure (within gDNA segment 94307 to 90990): Exon 1 93219 92665 ( 555 n); cDNA 1 555 ( 555 n); score: 0.847 MATCH C10HBa0115K16.1- SGN-E231589+ 0.847 555 0.995 C PGS_C10HBa0115K16.1-_SGN-E231589+ (93219 92665) Alignment (genomic DNA sequence = upper lines): TCGATTCTCC CTCTCTCTCT -TGT-TCTTT CTATTTTCTT TATTCCAACC CTATTTCTTT 93162 |||||||||| ||||||||| | | | || | |||| | ||||| |||| || |||||| TCGATTCTCC TTCTCTCTCT TTCTGTTCTT TTCTTTTTCT TATTCAAACC CTCCTTCTTT 60 TACCCTAATT AGTATATAAT TAAGAATAAA AGATGGCAAT AATACCCCAC TAATTAACTT 93102 |||||||||| || ||||||| |||||||||| |||||| ||| |||| ||||| ||||| ||| TACCCTAATT AGCATATAAT TAAGAATAAA AGATGG-AAT AATAACCCAC TAATTTACTC 119 AGGGTTACCT CTTTTAACCC CTCAAG-AAT TTGAGTTATT AATATAAACC CACGAACTTT 93043 | |||||||| |||||||||| | || | ||| | || ||||| || ||||||| ||| |||||| AAGGTTACCT CTTTTAACCC C-CAGGTAAT TAGACTTATT AACATAAACC CACTAACTTT 178 ATAATTAAGG CAAGAATAGT CAAAAACGTC CCTTAAAACT TAACCAGAAA TCCGACTCTG 92983 |||||||| | | ||||||| | |||||||| ||||||||| | ||||| |||||| | | ATAATTAAAG TAGGAATAGT CCAAAACGTC CCTTAAAACG TGTAAAGAAA TCCGACCCAG 238 CCTGGGATTT GCACAACCTG TGACGGGCCG TCGTGCCTGC GACGGTCCGT CCTGCAGGTC 92923 |||||| || | ||||||| ||| || ||| |||||||||| |||||||||| |||||||||| ACTGGGA-TT ACGCAACCTG TGATGGCCCG TCGTGCCTGC GACGGTCCGT CCTGCAGGTC 297 GTCGTAGAGT TCAGAGACCC AAATTTCCAC C-AAGGGTCT GTGACGGTCC GTCACACCTG 92864 |||| | || ||| |||| | ||||||||| | ||| |||| |||||||||| ||||| || | GTCGCAAGGT TCATAGACTC -AATTTCCAC CAAAGAGTCT GTGACGGTCC GTCACGCCCG 356 TGACGGTCCG TCCTTCCATT CCGTCACAAA GTTCAGAGAG TCGATTTTTA GTACCCAATT 92804 |||||||||| || | ||||| |||| || || |||||||||| |||||||||| |||||||||| TGACGGTCCG TCGTGCCATT CCGTTACGAA GTTCAGAGAG TCGATTTTTA GTACCCAATT 416 TCAGATTTTC TAAGTGTTTT GAAATGAGAC CCTGCGACAG TCCGTCGTGC CCATGACGGT 92744 ||||| |||| |||||||||| |||| ||||| | |||| | ||| |||||| ||||||||| TCAGAATTTC TAAGTGTTTT GAAACGAGAC TCCTCGACGG TCCATCGTGC TCATGACGGT 476 CCGTCATGGG GTTCGTCGCT TCTGCCAGTT TTTCCAGAAA TAAAGTCTGC CGCTCAAAAT 92684 ||||| |||| | ||||| || || ||| |||||| ||| |||| ||||| ||||||| CCGTCGTGGG TTCCGTCGTC TCAACCTGTT TTTCCAAAAA TAAAATCTGC TACTCAAAAC 536 GACTAAACGG GTCGTTACA 92665 |||||||| | ||||||||| GACTAAACAG GTCGTTACA 555 hqPGS_C10HBa0115K16.1-_SGN-E231589+ (93219 92665) ******************************************************************************** EST sequence 207 +strand 649 n (File: SGN-E374999+) 1 TCGATTCTCC TTCTCTCTCT TTCTGTTCTT TTCTTTTTCT TATTCAAACC CTCCTTCTTT 61 TACCCTAATT AGCATATAAT TAAGAATAAA AGATGGAATA ATAACCCACT AATTTACTCA 121 AGGTTACCTC TTTTAACCCC CAGGTAATTA GACTTATTAA CATAAACCCA CTAACTTTAT 181 AATTAAAGTA GGAATAGTCC AAAACGTCCC TTAAAACGTG TAAAGAAATC CGACCCAGAC 241 TGGGATTACG CAACCTGTGA TGGCCCGTCG TGCCTGCGAC GGTCCGTCCT GCAGGTCGTC 301 GCAAGGTTCA GAGACTCAAT TTCCACCAAA GAGTCTGTGA CGGTCCGTCA CGCCCGTGAC 361 GGTCCGTCGT GCCATTCCGT TACGAAGTTC AGAGAGTCGA TTTTTAGTAC CCAATTTCAG 421 AATTTCTAAG TGTTTTGAAA CGAGACTCCT CGACGGTCCA TCGTGCTCAT GACGGTCCGT 481 CGTGGGTTCC GTCGTCTCAA CCTGTTTTTC CAAAAATAAA ATCTGCTACT CCAAACGACT 541 AAACAGGTCG TTACATTTAT GTTCTTCCTA CTTAAATATT ATTATTATTT TACGATTTAT 601 AACACTATTA GAAACAAAGA TTTTCTTCAC CCTGAATTAA TGAAAAAAT Predicted gene structure (within gDNA segment 94307 to 90080): Exon 1 93219 92665 ( 555 n); cDNA 1 555 ( 555 n); score: 0.847 MATCH C10HBa0115K16.1- SGN-E374999+ 0.847 555 0.855 C PGS_C10HBa0115K16.1-_SGN-E374999+ (93219 92665) Alignment (genomic DNA sequence = upper lines): TCGATTCTCC CTCTCTCTCT -TGT-TCTTT CTATTTTCTT TATTCCAACC CTATTTCTTT 93162 |||||||||| ||||||||| | | | || | |||| | ||||| |||| || |||||| TCGATTCTCC TTCTCTCTCT TTCTGTTCTT TTCTTTTTCT TATTCAAACC CTCCTTCTTT 60 TACCCTAATT AGTATATAAT TAAGAATAAA AGATGGCAAT AATACCCCAC TAATTAACTT 93102 |||||||||| || ||||||| |||||||||| |||||| ||| |||| ||||| ||||| ||| TACCCTAATT AGCATATAAT TAAGAATAAA AGATGG-AAT AATAACCCAC TAATTTACTC 119 AGGGTTACCT CTTTTAACCC CTCAAG-AAT TTGAGTTATT AATATAAACC CACGAACTTT 93043 | |||||||| |||||||||| | || | ||| | || ||||| || ||||||| ||| |||||| AAGGTTACCT CTTTTAACCC C-CAGGTAAT TAGACTTATT AACATAAACC CACTAACTTT 178 ATAATTAAGG CAAGAATAGT CAAAAACGTC CCTTAAAACT TAACCAGAAA TCCGACTCTG 92983 |||||||| | | ||||||| | |||||||| ||||||||| | ||||| |||||| | | ATAATTAAAG TAGGAATAGT CCAAAACGTC CCTTAAAACG TGTAAAGAAA TCCGACCCAG 238 CCTGGGATTT GCACAACCTG TGACGGGCCG TCGTGCCTGC GACGGTCCGT CCTGCAGGTC 92923 |||||| || | ||||||| ||| || ||| |||||||||| |||||||||| |||||||||| ACTGGGA-TT ACGCAACCTG TGATGGCCCG TCGTGCCTGC GACGGTCCGT CCTGCAGGTC 297 GTCGTAGAGT TCAGAGACCC AAATTTCCAC C-AAGGGTCT GTGACGGTCC GTCACACCTG 92864 |||| | || |||||||| | ||||||||| | ||| |||| |||||||||| ||||| || | GTCGCAAGGT TCAGAGACTC -AATTTCCAC CAAAGAGTCT GTGACGGTCC GTCACGCCCG 356 TGACGGTCCG TCCTTCCATT CCGTCACAAA GTTCAGAGAG TCGATTTTTA GTACCCAATT 92804 |||||||||| || | ||||| |||| || || |||||||||| |||||||||| |||||||||| TGACGGTCCG TCGTGCCATT CCGTTACGAA GTTCAGAGAG TCGATTTTTA GTACCCAATT 416 TCAGATTTTC TAAGTGTTTT GAAATGAGAC CCTGCGACAG TCCGTCGTGC CCATGACGGT 92744 ||||| |||| |||||||||| |||| ||||| | |||| | ||| |||||| ||||||||| TCAGAATTTC TAAGTGTTTT GAAACGAGAC TCCTCGACGG TCCATCGTGC TCATGACGGT 476 CCGTCATGGG GTTCGTCGCT TCTGCCAGTT TTTCCAGAAA TAAAGTCTGC CGCTCAAAAT 92684 ||||| |||| | ||||| || || ||| |||||| ||| |||| ||||| ||| ||| CCGTCGTGGG TTCCGTCGTC TCAACCTGTT TTTCCAAAAA TAAAATCTGC TACTCCAAAC 536 GACTAAACGG GTCGTTACA 92665 |||||||| | ||||||||| GACTAAACAG GTCGTTACA 555 hqPGS_C10HBa0115K16.1-_SGN-E374999+ (93219 92665) ******************************************************************************** EST sequence 213 +strand 711 n (File: SGN-E396039+) 1 ATCGATTCTC CTTCTCTCTC TTTCTGTTCT TTTCTTTTTC TTATTCAAAC CCTCCTTCTT 61 TTACCCTAAT TAGCATATAA TTAAGAATAA AAGATGGAAT AATAACCCAC TAATTTACTC 121 AAGGTTACCT CTTTTAACCC CCAGGTAATT AGACTTATTA ACATAAACCC ACTAACTTTA 181 TAATTAAAGT AGGAATAGTC CAAAACGTCC CTTAAAACGT GTAAAGAAAT CCGACCCAGA 241 CTGGGATTAC GCAACCTGTG ATGGCCCGTC GTGCCTGCGA CGGTCCGTCC TGCAGGTCGT 301 CGCAAGGTTC AGAGACTCAA TTTCCACCAA AGAGTCTGTG ACGGTCCGTC ACGCCCGTGA 361 CGGTCCGTCG TGCCATTCCG TTACGAAGTT CAGAGAGTCG ATTTTTAGTA CCCAATTTCA 421 GAATTTCTAA GTGTTTTGAA ACGAGACTCC TCGACGGTCC ATCGTGCTCA TGACGGTCCG 481 TCGTGGGTTC CGTCGTCTCA ACCTGTTTTT CCAAAAATAA AATCTGCTAC TCAAAACGAC 541 TAAACAGGTC GTTACATTTA TGTTCTTCCT ACTTAAATAT TATTATTATT TTACGATTTA 601 TAACACTATT AAAAACAAAG ATTTTCTCCA CCATGAATTA ATGAAAAAAT TATGCCATAA 661 AAATAAAAAA AATTTACTCA TTTTTTCTTG GAGCTAATTC AAAAAAAAAA A Predicted gene structure (within gDNA segment 94317 to 89470): Exon 1 93219 92665 ( 555 n); cDNA 2 556 ( 555 n); score: 0.849 PPA cDNA 661 672 MATCH C10HBa0115K16.1- SGN-E396039+ 0.849 555 0.781 C PGS_C10HBa0115K16.1-_SGN-E396039+ (93219 92665) Alignment (genomic DNA sequence = upper lines): TCGATTCTCC CTCTCTCTCT TGTTCTT-TC TATTTTCT-T TATTCCAACC CTATTTCTTT 93162 |||||||||| ||||||||| | | || | | ||| | | ||||| |||| || |||||| TCGATTCTCC TTCTCTCTCT TTCTGTTCTT TTCTTTTTCT TATTCAAACC CTCCTTCTTT 61 TACCCTAATT AGTATATAAT TAAGAATAAA AGATGGCAAT AATACCCCAC TAATTAACTT 93102 |||||||||| || ||||||| |||||||||| |||||| ||| |||| ||||| ||||| ||| TACCCTAATT AGCATATAAT TAAGAATAAA AGATGG-AAT AATAACCCAC TAATTTACTC 120 AGGGTTACCT CTTTTAACCC CTCAAG-AAT TTGAGTTATT AATATAAACC CACGAACTTT 93043 | |||||||| |||||||||| | || | ||| | || ||||| || ||||||| ||| |||||| AAGGTTACCT CTTTTAACCC C-CAGGTAAT TAGACTTATT AACATAAACC CACTAACTTT 179 ATAATTAAGG CAAGAATAGT CAAAAACGTC CCTTAAAACT TAACCAGAAA TCCGACTCTG 92983 |||||||| | | ||||||| | |||||||| ||||||||| | ||||| |||||| | | ATAATTAAAG TAGGAATAGT CCAAAACGTC CCTTAAAACG TGTAAAGAAA TCCGACCCAG 239 CCTGGGATTT GCACAACCTG TGACGGGCCG TCGTGCCTGC GACGGTCCGT CCTGCAGGTC 92923 |||||| || | ||||||| ||| || ||| |||||||||| |||||||||| |||||||||| ACTGGGA-TT ACGCAACCTG TGATGGCCCG TCGTGCCTGC GACGGTCCGT CCTGCAGGTC 298 GTCGTAGAGT TCAGAGACCC AAATTTCCAC C-AAGGGTCT GTGACGGTCC GTCACACCTG 92864 |||| | || |||||||| | ||||||||| | ||| |||| |||||||||| ||||| || | GTCGCAAGGT TCAGAGACTC -AATTTCCAC CAAAGAGTCT GTGACGGTCC GTCACGCCCG 357 TGACGGTCCG TCCTTCCATT CCGTCACAAA GTTCAGAGAG TCGATTTTTA GTACCCAATT 92804 |||||||||| || | ||||| |||| || || |||||||||| |||||||||| |||||||||| TGACGGTCCG TCGTGCCATT CCGTTACGAA GTTCAGAGAG TCGATTTTTA GTACCCAATT 417 TCAGATTTTC TAAGTGTTTT GAAATGAGAC CCTGCGACAG TCCGTCGTGC CCATGACGGT 92744 ||||| |||| |||||||||| |||| ||||| | |||| | ||| |||||| ||||||||| TCAGAATTTC TAAGTGTTTT GAAACGAGAC TCCTCGACGG TCCATCGTGC TCATGACGGT 477 CCGTCATGGG GTTCGTCGCT TCTGCCAGTT TTTCCAGAAA TAAAGTCTGC CGCTCAAAAT 92684 ||||| |||| | ||||| || || ||| |||||| ||| |||| ||||| ||||||| CCGTCGTGGG TTCCGTCGTC TCAACCTGTT TTTCCAAAAA TAAAATCTGC TACTCAAAAC 537 GACTAAACGG GTCGTTACA 92665 |||||||| | ||||||||| GACTAAACAG GTCGTTACA 556 hqPGS_C10HBa0115K16.1-_SGN-E396039+ (93219 92665) ******************************************************************************** EST sequence 215 +strand 618 n (File: SGN-E396054+) 1 ATCGATTCTC CTTCTCTCTC TTTCTGTTCT TTTCTTTTTC TTATTCAAAC CCTCCTTCTT 61 TTACCCTAAT TAGCATATAA TTAAGAATAA AAGATGGAAT AATAACCCAC TAATTTACTC 121 AAGGTTACCT CTTTTAACCC CCAGGTAATT AGACTTATTA ACATAAACCC ACTAACTTTA 181 TAATTAAAGT AGGAATAGTC CAAAACGTCC CTTAAAACGT GTAAAGAAAT CCGACCCAGA 241 CTGGGATTAC GCAACCTGTG ATGGCCCGTC GTGCCTGCGA CGGTCCGTCC TGCAGGTCGT 301 CGCAAGGTTC AGAGACTCAA TTTCCACCAA AGAGTCTGTG ACGGTCCGTC ACGCCCGTGA 361 CGGTCCGTCG TGCCATTCCG TTACGAAGTT CAGAGAGTCG ATTTTTAGTA CCCAATTTCA 421 GAATTTCTAA GTGTTTTGAA ACGAGACTCC TCGACGGTCC ATCGTGCTCA TGACGGTCCG 481 TCGTGGGTTC CGTCGTCTCA ACCTGTTTTT CCAAAAATAA AATCTGCTAC TCAAAACGAC 541 TAAACAGGTC GTTACATTTA TGTTCTTCCT ACTTAAATAT TATTATTATT TTACGATTTA 601 TAACACTATT AGAAACAA Predicted gene structure (within gDNA segment 94317 to 90400): Exon 1 93219 92665 ( 555 n); cDNA 2 556 ( 555 n); score: 0.849 MATCH C10HBa0115K16.1- SGN-E396054+ 0.849 555 0.898 C PGS_C10HBa0115K16.1-_SGN-E396054+ (93219 92665) Alignment (genomic DNA sequence = upper lines): TCGATTCTCC CTCTCTCTCT TGTTCTT-TC TATTTTCT-T TATTCCAACC CTATTTCTTT 93162 |||||||||| ||||||||| | | || | | ||| | | ||||| |||| || |||||| TCGATTCTCC TTCTCTCTCT TTCTGTTCTT TTCTTTTTCT TATTCAAACC CTCCTTCTTT 61 TACCCTAATT AGTATATAAT TAAGAATAAA AGATGGCAAT AATACCCCAC TAATTAACTT 93102 |||||||||| || ||||||| |||||||||| |||||| ||| |||| ||||| ||||| ||| TACCCTAATT AGCATATAAT TAAGAATAAA AGATGG-AAT AATAACCCAC TAATTTACTC 120 AGGGTTACCT CTTTTAACCC CTCAAG-AAT TTGAGTTATT AATATAAACC CACGAACTTT 93043 | |||||||| |||||||||| | || | ||| | || ||||| || ||||||| ||| |||||| AAGGTTACCT CTTTTAACCC C-CAGGTAAT TAGACTTATT AACATAAACC CACTAACTTT 179 ATAATTAAGG CAAGAATAGT CAAAAACGTC CCTTAAAACT TAACCAGAAA TCCGACTCTG 92983 |||||||| | | ||||||| | |||||||| ||||||||| | ||||| |||||| | | ATAATTAAAG TAGGAATAGT CCAAAACGTC CCTTAAAACG TGTAAAGAAA TCCGACCCAG 239 CCTGGGATTT GCACAACCTG TGACGGGCCG TCGTGCCTGC GACGGTCCGT CCTGCAGGTC 92923 |||||| || | ||||||| ||| || ||| |||||||||| |||||||||| |||||||||| ACTGGGA-TT ACGCAACCTG TGATGGCCCG TCGTGCCTGC GACGGTCCGT CCTGCAGGTC 298 GTCGTAGAGT TCAGAGACCC AAATTTCCAC C-AAGGGTCT GTGACGGTCC GTCACACCTG 92864 |||| | || |||||||| | ||||||||| | ||| |||| |||||||||| ||||| || | GTCGCAAGGT TCAGAGACTC -AATTTCCAC CAAAGAGTCT GTGACGGTCC GTCACGCCCG 357 TGACGGTCCG TCCTTCCATT CCGTCACAAA GTTCAGAGAG TCGATTTTTA GTACCCAATT 92804 |||||||||| || | ||||| |||| || || |||||||||| |||||||||| |||||||||| TGACGGTCCG TCGTGCCATT CCGTTACGAA GTTCAGAGAG TCGATTTTTA GTACCCAATT 417 TCAGATTTTC TAAGTGTTTT GAAATGAGAC CCTGCGACAG TCCGTCGTGC CCATGACGGT 92744 ||||| |||| |||||||||| |||| ||||| | |||| | ||| |||||| ||||||||| TCAGAATTTC TAAGTGTTTT GAAACGAGAC TCCTCGACGG TCCATCGTGC TCATGACGGT 477 CCGTCATGGG GTTCGTCGCT TCTGCCAGTT TTTCCAGAAA TAAAGTCTGC CGCTCAAAAT 92684 ||||| |||| | ||||| || || ||| |||||| ||| |||| ||||| ||||||| CCGTCGTGGG TTCCGTCGTC TCAACCTGTT TTTCCAAAAA TAAAATCTGC TACTCAAAAC 537 GACTAAACGG GTCGTTACA 92665 |||||||| | ||||||||| GACTAAACAG GTCGTTACA 556 hqPGS_C10HBa0115K16.1-_SGN-E396054+ (93219 92665) ******************************************************************************** EST sequence 217 +strand 711 n (File: SGN-E396056+) 1 ATCGATTCTC CTTCTCTCTC TTTCTGTTCT TTTCTTTTTC TTATTCAAAC CCTCCTTCTT 61 TTACCCTAAT TAGCATATAA TTAAGAATAA AAGATGGAAT AATAACCCAC TAATTTACTC 121 AAGGTTACCT CTTTTAACCC CCAGGTAATT AGACTTATTA ACATAAACCC ACTAACTTTA 181 TAATTAAAGT AGGAATAGTC CAAAACGTCC CTTAAAACGT GTAAAGAAAT CCGACCCAGA 241 CTGGGATTAC GCAACCTGTG ATGGCCCGTC GTGCCTGCGA CGGTCCGTCC TGCAGGTCGT 301 CGCAAGGTTC AGAGACTCAA TTTCCACCAA AGAGTCTGTG ACGGTCCGTC ACGCCCGTGA 361 CGGTCCGTCG TGCCATTCCG TTACGAAGTT CAGAGAGTCG ATTTTTAGTA CCCAATTTCA 421 GAATTTCTAA GTGTTTTGAA ACGAGACTCC TCGACGGTCC ATCGTGCTCA TGACGGTCCG 481 TCGTGGGTTC CGTCGTCTCA ACCTGTTTTT CCAAAAATAA AATCTGCTAC TCAAAACGAC 541 TAAACAGGTC GTTACATTTA TGTTCTTCCT ACTTAAATAT TATTATTATT TTACGATTTA 601 TAACACTATT AGAAACAAAA ATTTTCTCAC CCATGAATTA ATGAAAAAAT TATGCCATAA 661 AATAATAAAA ATTTACTCAT TTTTTCTTTG AGCTAATTCA TAAAAAAAAA A Predicted gene structure (within gDNA segment 94317 to 89470): Exon 1 93219 92665 ( 555 n); cDNA 2 556 ( 555 n); score: 0.849 PPA cDNA 700 711 MATCH C10HBa0115K16.1- SGN-E396056+ 0.849 555 0.781 C PGS_C10HBa0115K16.1-_SGN-E396056+ (93219 92665) Alignment (genomic DNA sequence = upper lines): TCGATTCTCC CTCTCTCTCT TGTTCTT-TC TATTTTCT-T TATTCCAACC CTATTTCTTT 93162 |||||||||| ||||||||| | | || | | ||| | | ||||| |||| || |||||| TCGATTCTCC TTCTCTCTCT TTCTGTTCTT TTCTTTTTCT TATTCAAACC CTCCTTCTTT 61 TACCCTAATT AGTATATAAT TAAGAATAAA AGATGGCAAT AATACCCCAC TAATTAACTT 93102 |||||||||| || ||||||| |||||||||| |||||| ||| |||| ||||| ||||| ||| TACCCTAATT AGCATATAAT TAAGAATAAA AGATGG-AAT AATAACCCAC TAATTTACTC 120 AGGGTTACCT CTTTTAACCC CTCAAG-AAT TTGAGTTATT AATATAAACC CACGAACTTT 93043 | |||||||| |||||||||| | || | ||| | || ||||| || ||||||| ||| |||||| AAGGTTACCT CTTTTAACCC C-CAGGTAAT TAGACTTATT AACATAAACC CACTAACTTT 179 ATAATTAAGG CAAGAATAGT CAAAAACGTC CCTTAAAACT TAACCAGAAA TCCGACTCTG 92983 |||||||| | | ||||||| | |||||||| ||||||||| | ||||| |||||| | | ATAATTAAAG TAGGAATAGT CCAAAACGTC CCTTAAAACG TGTAAAGAAA TCCGACCCAG 239 CCTGGGATTT GCACAACCTG TGACGGGCCG TCGTGCCTGC GACGGTCCGT CCTGCAGGTC 92923 |||||| || | ||||||| ||| || ||| |||||||||| |||||||||| |||||||||| ACTGGGA-TT ACGCAACCTG TGATGGCCCG TCGTGCCTGC GACGGTCCGT CCTGCAGGTC 298 GTCGTAGAGT TCAGAGACCC AAATTTCCAC C-AAGGGTCT GTGACGGTCC GTCACACCTG 92864 |||| | || |||||||| | ||||||||| | ||| |||| |||||||||| ||||| || | GTCGCAAGGT TCAGAGACTC -AATTTCCAC CAAAGAGTCT GTGACGGTCC GTCACGCCCG 357 TGACGGTCCG TCCTTCCATT CCGTCACAAA GTTCAGAGAG TCGATTTTTA GTACCCAATT 92804 |||||||||| || | ||||| |||| || || |||||||||| |||||||||| |||||||||| TGACGGTCCG TCGTGCCATT CCGTTACGAA GTTCAGAGAG TCGATTTTTA GTACCCAATT 417 TCAGATTTTC TAAGTGTTTT GAAATGAGAC CCTGCGACAG TCCGTCGTGC CCATGACGGT 92744 ||||| |||| |||||||||| |||| ||||| | |||| | ||| |||||| ||||||||| TCAGAATTTC TAAGTGTTTT GAAACGAGAC TCCTCGACGG TCCATCGTGC TCATGACGGT 477 CCGTCATGGG GTTCGTCGCT TCTGCCAGTT TTTCCAGAAA TAAAGTCTGC CGCTCAAAAT 92684 ||||| |||| | ||||| || || ||| |||||| ||| |||| ||||| ||||||| CCGTCGTGGG TTCCGTCGTC TCAACCTGTT TTTCCAAAAA TAAAATCTGC TACTCAAAAC 537 GACTAAACGG GTCGTTACA 92665 |||||||| | ||||||||| GACTAAACAG GTCGTTACA 556 hqPGS_C10HBa0115K16.1-_SGN-E396056+ (93219 92665) ******************************************************************************** EST sequence 219 +strand 610 n (File: SGN-E396058+) 1 ATCGATTCTC CTTCTCTCTC TTTCTGTTCT TTTCTTTTTC TTATTCAAAC CCTCCTTCTT 61 TTACCCTAAT TAGCATATAA TTAAGAATAA AAGATGGAAT AATAACCCAC TAATTTACTC 121 AAGGTTACCT CTTTTAACCC CCAGGTAATT AGACTTATTA ACATAAACCC ACTAACTTTA 181 TAATTAAAGT AGGAATAGTC CAAAACGTCC CTTAAAACGT GTAAAGAAAT CCGACCCAGA 241 CTGGGATTAC GCAACCTGTG ATGGCCCGTC GTGCCTGCGA CGGTCCGTCC TGCAGGTCGT 301 CGCAAGGTTC AGAGACTCAA TTTCCACCAA AGAGTCTGTG ACGGTCCGTC ACGCCCGTGA 361 CGGTCCGTCG TGCCATTCCG TTACGAAGTT CAGAGAGTCG ATTTTTAGTA CCCAATTTCA 421 GAATTTCTAA GTGTTTTGAA ACGAGACTCC TCGACGGTCC ATCGTGCTCA TGACGGTCCG 481 TCGTGGGTTC CGTCGTCTCA ACCTGTGTTT CCAAAAATAA AATCTGCTAC TCACAACGAC 541 TAAACAGGTC GTTACATTTA GGTTCTTCAT AGTTAACTAT TATTATTATT TTACGATTTA 601 TAACACTATT Predicted gene structure (within gDNA segment 94317 to 90480): Exon 1 93219 92665 ( 555 n); cDNA 2 556 ( 555 n); score: 0.845 MATCH C10HBa0115K16.1- SGN-E396058+ 0.845 555 0.910 C PGS_C10HBa0115K16.1-_SGN-E396058+ (93219 92665) Alignment (genomic DNA sequence = upper lines): TCGATTCTCC CTCTCTCTCT TGTTCTT-TC TATTTTCT-T TATTCCAACC CTATTTCTTT 93162 |||||||||| ||||||||| | | || | | ||| | | ||||| |||| || |||||| TCGATTCTCC TTCTCTCTCT TTCTGTTCTT TTCTTTTTCT TATTCAAACC CTCCTTCTTT 61 TACCCTAATT AGTATATAAT TAAGAATAAA AGATGGCAAT AATACCCCAC TAATTAACTT 93102 |||||||||| || ||||||| |||||||||| |||||| ||| |||| ||||| ||||| ||| TACCCTAATT AGCATATAAT TAAGAATAAA AGATGG-AAT AATAACCCAC TAATTTACTC 120 AGGGTTACCT CTTTTAACCC CTCAAG-AAT TTGAGTTATT AATATAAACC CACGAACTTT 93043 | |||||||| |||||||||| | || | ||| | || ||||| || ||||||| ||| |||||| AAGGTTACCT CTTTTAACCC C-CAGGTAAT TAGACTTATT AACATAAACC CACTAACTTT 179 ATAATTAAGG CAAGAATAGT CAAAAACGTC CCTTAAAACT TAACCAGAAA TCCGACTCTG 92983 |||||||| | | ||||||| | |||||||| ||||||||| | ||||| |||||| | | ATAATTAAAG TAGGAATAGT CCAAAACGTC CCTTAAAACG TGTAAAGAAA TCCGACCCAG 239 CCTGGGATTT GCACAACCTG TGACGGGCCG TCGTGCCTGC GACGGTCCGT CCTGCAGGTC 92923 |||||| || | ||||||| ||| || ||| |||||||||| |||||||||| |||||||||| ACTGGGA-TT ACGCAACCTG TGATGGCCCG TCGTGCCTGC GACGGTCCGT CCTGCAGGTC 298 GTCGTAGAGT TCAGAGACCC AAATTTCCAC C-AAGGGTCT GTGACGGTCC GTCACACCTG 92864 |||| | || |||||||| | ||||||||| | ||| |||| |||||||||| ||||| || | GTCGCAAGGT TCAGAGACTC -AATTTCCAC CAAAGAGTCT GTGACGGTCC GTCACGCCCG 357 TGACGGTCCG TCCTTCCATT CCGTCACAAA GTTCAGAGAG TCGATTTTTA GTACCCAATT 92804 |||||||||| || | ||||| |||| || || |||||||||| |||||||||| |||||||||| TGACGGTCCG TCGTGCCATT CCGTTACGAA GTTCAGAGAG TCGATTTTTA GTACCCAATT 417 TCAGATTTTC TAAGTGTTTT GAAATGAGAC CCTGCGACAG TCCGTCGTGC CCATGACGGT 92744 ||||| |||| |||||||||| |||| ||||| | |||| | ||| |||||| ||||||||| TCAGAATTTC TAAGTGTTTT GAAACGAGAC TCCTCGACGG TCCATCGTGC TCATGACGGT 477 CCGTCATGGG GTTCGTCGCT TCTGCCAGTT TTTCCAGAAA TAAAGTCTGC CGCTCAAAAT 92684 ||||| |||| | ||||| || || || |||||| ||| |||| ||||| |||| || CCGTCGTGGG TTCCGTCGTC TCAACCTGTG TTTCCAAAAA TAAAATCTGC TACTCACAAC 537 GACTAAACGG GTCGTTACA 92665 |||||||| | ||||||||| GACTAAACAG GTCGTTACA 556 hqPGS_C10HBa0115K16.1-_SGN-E396058+ (93219 92665) ******************************************************************************** EST sequence 235 +strand 690 n (File: SGN-E377133+) 1 TCGATTCTCC TTCTCTCTCT TTCTGTTCTT TTCTTTTTCT TATTCAAACC CTCCTTCTTT 61 TACCCTAATT AGCATATAAT TAAGAATAAA AGATGGAATA ATAACCCACT AATTTACTCA 121 AGGTTACCTC TTTTAACCCC CAGGTAATTA GACTTATTAA CATAAACCCA CTAACTTTAT 181 AATTAAAGTA GGAATAGTCC AAAACGTCCC TTAAAACGTG TAAAGAAATC CGACCCAGAC 241 TGGGATTACG CAACCTGTGA TGGCCCGTCG TGCCTGCGAC GGTCCGTCCT GCAGGTCGTC 301 GCAAGGTTCA GAGACTCAAT TTCCACCAAA GAGTCTGTGA CGGTCCGTCA CGCCCGTGAC 361 GGTCCGTCGT GCCATTCCGT TACGAAGTTC AGAGAGTCGA TTTTTAGTAC CCAATTTCAG 421 AATTTCTAAG TGTTTTGAAA CGAGACTCCT CGACGGTCCA TCGTGCTCAT GACGGTCCGT 481 CGTGGGTTCC GTCGTCTCAA CCTGTTTTTC CAAAAATAAA ATCTGCTACT CAAAACGACT 541 AAACAGGTCG TTACATTTAT GTTCTTCCTA CTTAAATATT ATTATTATTT TACGATTTAT 601 AACACTATTA GAAACAAAGA TTTTCTCAAC CATGAATTAA TGAAAAAATT ATGCCATAAA 661 ATATAAAAAA TTTACTCATT TTTCATTGAG Predicted gene structure (within gDNA segment 94307 to 89670): Exon 1 93219 92665 ( 555 n); cDNA 1 555 ( 555 n); score: 0.849 MATCH C10HBa0115K16.1- SGN-E377133+ 0.849 555 0.804 C PGS_C10HBa0115K16.1-_SGN-E377133+ (93219 92665) Alignment (genomic DNA sequence = upper lines): TCGATTCTCC CTCTCTCTCT -TGT-TCTTT CTATTTTCTT TATTCCAACC CTATTTCTTT 93162 |||||||||| ||||||||| | | | || | |||| | ||||| |||| || |||||| TCGATTCTCC TTCTCTCTCT TTCTGTTCTT TTCTTTTTCT TATTCAAACC CTCCTTCTTT 60 TACCCTAATT AGTATATAAT TAAGAATAAA AGATGGCAAT AATACCCCAC TAATTAACTT 93102 |||||||||| || ||||||| |||||||||| |||||| ||| |||| ||||| ||||| ||| TACCCTAATT AGCATATAAT TAAGAATAAA AGATGG-AAT AATAACCCAC TAATTTACTC 119 AGGGTTACCT CTTTTAACCC CTCAAG-AAT TTGAGTTATT AATATAAACC CACGAACTTT 93043 | |||||||| |||||||||| | || | ||| | || ||||| || ||||||| ||| |||||| AAGGTTACCT CTTTTAACCC C-CAGGTAAT TAGACTTATT AACATAAACC CACTAACTTT 178 ATAATTAAGG CAAGAATAGT CAAAAACGTC CCTTAAAACT TAACCAGAAA TCCGACTCTG 92983 |||||||| | | ||||||| | |||||||| ||||||||| | ||||| |||||| | | ATAATTAAAG TAGGAATAGT CCAAAACGTC CCTTAAAACG TGTAAAGAAA TCCGACCCAG 238 CCTGGGATTT GCACAACCTG TGACGGGCCG TCGTGCCTGC GACGGTCCGT CCTGCAGGTC 92923 |||||| || | ||||||| ||| || ||| |||||||||| |||||||||| |||||||||| ACTGGGA-TT ACGCAACCTG TGATGGCCCG TCGTGCCTGC GACGGTCCGT CCTGCAGGTC 297 GTCGTAGAGT TCAGAGACCC AAATTTCCAC C-AAGGGTCT GTGACGGTCC GTCACACCTG 92864 |||| | || |||||||| | ||||||||| | ||| |||| |||||||||| ||||| || | GTCGCAAGGT TCAGAGACTC -AATTTCCAC CAAAGAGTCT GTGACGGTCC GTCACGCCCG 356 TGACGGTCCG TCCTTCCATT CCGTCACAAA GTTCAGAGAG TCGATTTTTA GTACCCAATT 92804 |||||||||| || | ||||| |||| || || |||||||||| |||||||||| |||||||||| TGACGGTCCG TCGTGCCATT CCGTTACGAA GTTCAGAGAG TCGATTTTTA GTACCCAATT 416 TCAGATTTTC TAAGTGTTTT GAAATGAGAC CCTGCGACAG TCCGTCGTGC CCATGACGGT 92744 ||||| |||| |||||||||| |||| ||||| | |||| | ||| |||||| ||||||||| TCAGAATTTC TAAGTGTTTT GAAACGAGAC TCCTCGACGG TCCATCGTGC TCATGACGGT 476 CCGTCATGGG GTTCGTCGCT TCTGCCAGTT TTTCCAGAAA TAAAGTCTGC CGCTCAAAAT 92684 ||||| |||| | ||||| || || ||| |||||| ||| |||| ||||| ||||||| CCGTCGTGGG TTCCGTCGTC TCAACCTGTT TTTCCAAAAA TAAAATCTGC TACTCAAAAC 536 GACTAAACGG GTCGTTACA 92665 |||||||| | ||||||||| GACTAAACAG GTCGTTACA 555 hqPGS_C10HBa0115K16.1-_SGN-E377133+ (93219 92665) ******************************************************************************** EST sequence 28 -strand 681 n (File: SGN-E389553-) 1 ATCGATTCTC CTTCTCTCTC TTTCTGTTCT TTTCTTTTTC TTATTCAAAC CCTCCTTCTT 61 TTACCCTAAT TAGCATATAA TTAAGAATAA AAGATGGAAT AATAACCCAC TAATTTACTC 121 AAGGTTACCT CTTTTAACCC CCAGGTAATT AGACTTATTA ACATAAACCC ACTAACTTTA 181 TAATTAAAGT AGGAATAGTC CAAAACGTCC CTTAAAACGT GTAAAGAAAT CCGACCCAGA 241 CTGGGATTAC GCAACCTGTG ATGGCCCGTC GTGCCTGCGA CGGTCCGTCC TGCAGGTCGT 301 CGCAAGGTTC AGAGACTCAA TTTCCACCAA AGAGTCTGTG ACGGTCCGTC ACGCCCGTGA 361 CGGTCCGTCG TGCCATTCCG TTACGAAGTT CAGAGAGTCG ATTTTTAGTA CCCAATTTCA 421 GAATTTCTAA GTGTTTTGAA ACGAGACTCC TCGACGGTCC ATCGTGCTCA TGACGGTCCG 481 TCGTGGGTTC CGTCGTCTCA ACCTGTTTTT CCAAAAATAA AATCTGCTAC TCAAAACGAC 541 TAAACAGGTC GTTACATTTA TGTTCGTTCC TACTTAAATA TTATTATTAT TTTACGATTT 601 ATAACACTAT TAGAAACAAA GATTTTCTCA ACCATGAATT AATGAAAAAA TTATGGAATA 661 AAATATAAAA AATTACTCAT T Predicted gene structure (within gDNA segment 94327 to 88580): Exon 1 93219 92665 ( 555 n); cDNA 2 556 ( 555 n); score: 0.849 MATCH C10HBa0115K16.1- SGN-E389553- 0.849 555 0.815 C PGS_C10HBa0115K16.1-_SGN-E389553- (93219 92665) Alignment (genomic DNA sequence = upper lines): TCGATTCTCC CTCTCTCTCT TGTTCTT-TC TATTTTCT-T TATTCCAACC CTATTTCTTT 93162 |||||||||| ||||||||| | | || | | ||| | | ||||| |||| || |||||| TCGATTCTCC TTCTCTCTCT TTCTGTTCTT TTCTTTTTCT TATTCAAACC CTCCTTCTTT 61 TACCCTAATT AGTATATAAT TAAGAATAAA AGATGGCAAT AATACCCCAC TAATTAACTT 93102 |||||||||| || ||||||| |||||||||| |||||| ||| |||| ||||| ||||| ||| TACCCTAATT AGCATATAAT TAAGAATAAA AGATGG-AAT AATAACCCAC TAATTTACTC 120 AGGGTTACCT CTTTTAACCC CTCAAG-AAT TTGAGTTATT AATATAAACC CACGAACTTT 93043 | |||||||| |||||||||| | || | ||| | || ||||| || ||||||| ||| |||||| AAGGTTACCT CTTTTAACCC C-CAGGTAAT TAGACTTATT AACATAAACC CACTAACTTT 179 ATAATTAAGG CAAGAATAGT CAAAAACGTC CCTTAAAACT TAACCAGAAA TCCGACTCTG 92983 |||||||| | | ||||||| | |||||||| ||||||||| | ||||| |||||| | | ATAATTAAAG TAGGAATAGT CCAAAACGTC CCTTAAAACG TGTAAAGAAA TCCGACCCAG 239 CCTGGGATTT GCACAACCTG TGACGGGCCG TCGTGCCTGC GACGGTCCGT CCTGCAGGTC 92923 |||||| || | ||||||| ||| || ||| |||||||||| |||||||||| |||||||||| ACTGGGA-TT ACGCAACCTG TGATGGCCCG TCGTGCCTGC GACGGTCCGT CCTGCAGGTC 298 GTCGTAGAGT TCAGAGACCC AAATTTCCAC C-AAGGGTCT GTGACGGTCC GTCACACCTG 92864 |||| | || |||||||| | ||||||||| | ||| |||| |||||||||| ||||| || | GTCGCAAGGT TCAGAGACTC -AATTTCCAC CAAAGAGTCT GTGACGGTCC GTCACGCCCG 357 TGACGGTCCG TCCTTCCATT CCGTCACAAA GTTCAGAGAG TCGATTTTTA GTACCCAATT 92804 |||||||||| || | ||||| |||| || || |||||||||| |||||||||| |||||||||| TGACGGTCCG TCGTGCCATT CCGTTACGAA GTTCAGAGAG TCGATTTTTA GTACCCAATT 417 TCAGATTTTC TAAGTGTTTT GAAATGAGAC CCTGCGACAG TCCGTCGTGC CCATGACGGT 92744 ||||| |||| |||||||||| |||| ||||| | |||| | ||| |||||| ||||||||| TCAGAATTTC TAAGTGTTTT GAAACGAGAC TCCTCGACGG TCCATCGTGC TCATGACGGT 477 CCGTCATGGG GTTCGTCGCT TCTGCCAGTT TTTCCAGAAA TAAAGTCTGC CGCTCAAAAT 92684 ||||| |||| | ||||| || || ||| |||||| ||| |||| ||||| ||||||| CCGTCGTGGG TTCCGTCGTC TCAACCTGTT TTTCCAAAAA TAAAATCTGC TACTCAAAAC 537 GACTAAACGG GTCGTTACA 92665 |||||||| | ||||||||| GACTAAACAG GTCGTTACA 556 hqPGS_C10HBa0115K16.1-_SGN-E389553- (93219 92665) ******************************************************************************** EST sequence 12 -strand 679 n (File: SGN-E550127-) 1 ATCGATTCTC CTTCTCTCTC TTTCTGTCCT TTTCTTTTTC TTATCAAAAC CCTCCTTCTT 61 TTACCCTAAT TAGCATATAA TTAAGAATAA AAGATGGAAT AATAACCCAC TAATTTACTC 121 AAGGTTACCT CTTTTAACCC CCAGGTAATT AGACTTATTA ACATAAACCC ACTAACTTTA 181 TAATTAAAGT AGGAATAGTC CAAAACGTCC CTTAAAACGT GTAAAGAAAT CCGACCCAGA 241 CTGGGATTAC GCAACCTGTG ATGGCCCGTC GTGCCTGCGA CGGTCCGTCC TGCAGGTCGT 301 CGCAAGGTTC AGAGACTCAA TTTCCACCAA AGAGTCTGTG ACGGTCCGTC ACGCCCGTGA 361 CGGTCCGTCG TGCCATTCCG TTACGAAGTT CAGAGAGTCG ATTTTTAGTA CCCAATTTCA 421 GAATTTCTAA GTGTTTTGAA ACGAGACTCC TCGACGGTCC ATCGTGCTCA TGACGGTCCG 481 TCGTGGGTTC CGTCGTCTCA ACCTGTTTTT CCAAAAATAA AATCTGCTAC TCAAAACGAC 541 TAAACAGGTC GTTACATTTA TGTTCTTCCT ACTTAAATAT TATTATTATT TTACGATTTA 601 TAACACTATT AGAAACAAAG ATTTGCACAA CCATGAATTA ATGAAAAAAT TATGACATAA 661 AATATAAAAA ATTACTCAT Predicted gene structure (within gDNA segment 94327 to 89200): Exon 1 93219 92665 ( 555 n); cDNA 2 556 ( 555 n); score: 0.847 MATCH C10HBa0115K16.1- SGN-E550127- 0.847 555 0.817 C PGS_C10HBa0115K16.1-_SGN-E550127- (93219 92665) Alignment (genomic DNA sequence = upper lines): TCGATTCTCC CTCTCTCTC- TTGT-TCTTT CTATTTTCTT TATTCCAACC CTATTTCTTT 93162 |||||||||| |||||||| || | || || | |||| | ||| |||| || |||||| TCGATTCTCC TTCTCTCTCT TTCTGTCCTT TTCTTTTTCT TATCAAAACC CTCCTTCTTT 61 TACCCTAATT AGTATATAAT TAAGAATAAA AGATGGCAAT AATACCCCAC TAATTAACTT 93102 |||||||||| || ||||||| |||||||||| |||||| ||| |||| ||||| ||||| ||| TACCCTAATT AGCATATAAT TAAGAATAAA AGATGG-AAT AATAACCCAC TAATTTACTC 120 AGGGTTACCT CTTTTAACCC CTCAAG-AAT TTGAGTTATT AATATAAACC CACGAACTTT 93043 | |||||||| |||||||||| | || | ||| | || ||||| || ||||||| ||| |||||| AAGGTTACCT CTTTTAACCC C-CAGGTAAT TAGACTTATT AACATAAACC CACTAACTTT 179 ATAATTAAGG CAAGAATAGT CAAAAACGTC CCTTAAAACT TAACCAGAAA TCCGACTCTG 92983 |||||||| | | ||||||| | |||||||| ||||||||| | ||||| |||||| | | ATAATTAAAG TAGGAATAGT CCAAAACGTC CCTTAAAACG TGTAAAGAAA TCCGACCCAG 239 CCTGGGATTT GCACAACCTG TGACGGGCCG TCGTGCCTGC GACGGTCCGT CCTGCAGGTC 92923 |||||| || | ||||||| ||| || ||| |||||||||| |||||||||| |||||||||| ACTGGGA-TT ACGCAACCTG TGATGGCCCG TCGTGCCTGC GACGGTCCGT CCTGCAGGTC 298 GTCGTAGAGT TCAGAGACCC AAATTTCCAC C-AAGGGTCT GTGACGGTCC GTCACACCTG 92864 |||| | || |||||||| | ||||||||| | ||| |||| |||||||||| ||||| || | GTCGCAAGGT TCAGAGACTC -AATTTCCAC CAAAGAGTCT GTGACGGTCC GTCACGCCCG 357 TGACGGTCCG TCCTTCCATT CCGTCACAAA GTTCAGAGAG TCGATTTTTA GTACCCAATT 92804 |||||||||| || | ||||| |||| || || |||||||||| |||||||||| |||||||||| TGACGGTCCG TCGTGCCATT CCGTTACGAA GTTCAGAGAG TCGATTTTTA GTACCCAATT 417 TCAGATTTTC TAAGTGTTTT GAAATGAGAC CCTGCGACAG TCCGTCGTGC CCATGACGGT 92744 ||||| |||| |||||||||| |||| ||||| | |||| | ||| |||||| ||||||||| TCAGAATTTC TAAGTGTTTT GAAACGAGAC TCCTCGACGG TCCATCGTGC TCATGACGGT 477 CCGTCATGGG GTTCGTCGCT TCTGCCAGTT TTTCCAGAAA TAAAGTCTGC CGCTCAAAAT 92684 ||||| |||| | ||||| || || ||| |||||| ||| |||| ||||| ||||||| CCGTCGTGGG TTCCGTCGTC TCAACCTGTT TTTCCAAAAA TAAAATCTGC TACTCAAAAC 537 GACTAAACGG GTCGTTACA 92665 |||||||| | ||||||||| GACTAAACAG GTCGTTACA 556 hqPGS_C10HBa0115K16.1-_SGN-E550127- (93219 92665) ******************************************************************************** EST sequence 14 -strand 673 n (File: SGN-E550140-) 1 ATCGATTCTC CTTCTCTCTC TTTCTGTTCT TTTCTTTTTC TTATTCAAAC CCTCCTTCTT 61 TTACCCTAAT TAGCATATAA TTAAGAATAA AAGATGGAAT AATAACCCAC TAATTACTCN 121 AAGGTTACCT CTTTTAACCC CCAGGTAATT AGACTTATTA ACATAAACCC ACTAACTTTA 181 TAATTAAAGT AGGAATAGTC CAAAACGTCC CTTAAAACGT GTAAAGAAAT CCGACCCAGA 241 CTGGGATTAC GCAACCTGTG ATGGCCCGTC GTGCCTGCGA CGGTCCGTCC TGCAGGTCGT 301 CGCAAGGTTC AGAGACTCAA TTTCCACCAA AGAGTCTGTG ACGGTCCGTC ACGCCCGTGA 361 CGGTCCGTCG TGCCATTCCG TTACGAAGTT CAGAGAGTCG ATTTTTAGTA CCCAATTTCA 421 GAATTTCTAA GTGTTTTGAA ACGAGACTCC TCGACGGTCC ATCGTGCTCA TGACGGTCCG 481 TCGTGGGTTC CGTCGTCTCA ACCTGTTTTT CCAAAAATAA AATCTGCTAC TCAAAACGAC 541 TAAACAGGTC GTTACATTTA TGTTCTTCCT ACTTAAATAT TATTATTATT TTACGATTTA 601 TAACACTATT AGAAACAAAG ATGTTATCAA CCATGAATTA ACAAAAAATT AGACCAAAAA 661 TATAAAAAAT TAC Predicted gene structure (within gDNA segment 94327 to 89260): Exon 1 93219 92665 ( 555 n); cDNA 2 556 ( 555 n); score: 0.845 MATCH C10HBa0115K16.1- SGN-E550140- 0.845 555 0.825 C PGS_C10HBa0115K16.1-_SGN-E550140- (93219 92665) Alignment (genomic DNA sequence = upper lines): TCGATTCTCC CTCTCTCTCT TGTTCTT-TC TATTTTCT-T TATTCCAACC CTATTTCTTT 93162 |||||||||| ||||||||| | | || | | ||| | | ||||| |||| || |||||| TCGATTCTCC TTCTCTCTCT TTCTGTTCTT TTCTTTTTCT TATTCAAACC CTCCTTCTTT 61 TACCCTAATT AGTATATAAT TAAGAATAAA AGATGGCAAT AATACCCCAC TAATTAACTT 93102 |||||||||| || ||||||| |||||||||| |||||| ||| |||| ||||| |||||| TACCCTAATT AGCATATAAT TAAGAATAAA AGATGG-AAT AATAACCCAC TAATTACTCN 120 AGGGTTACCT CTTTTAACCC CTCAAG-AAT TTGAGTTATT AATATAAACC CACGAACTTT 93043 | |||||||| |||||||||| | || | ||| | || ||||| || ||||||| ||| |||||| AAGGTTACCT CTTTTAACCC C-CAGGTAAT TAGACTTATT AACATAAACC CACTAACTTT 179 ATAATTAAGG CAAGAATAGT CAAAAACGTC CCTTAAAACT TAACCAGAAA TCCGACTCTG 92983 |||||||| | | ||||||| | |||||||| ||||||||| | ||||| |||||| | | ATAATTAAAG TAGGAATAGT CCAAAACGTC CCTTAAAACG TGTAAAGAAA TCCGACCCAG 239 CCTGGGATTT GCACAACCTG TGACGGGCCG TCGTGCCTGC GACGGTCCGT CCTGCAGGTC 92923 |||||| || | ||||||| ||| || ||| |||||||||| |||||||||| |||||||||| ACTGGGA-TT ACGCAACCTG TGATGGCCCG TCGTGCCTGC GACGGTCCGT CCTGCAGGTC 298 GTCGTAGAGT TCAGAGACCC AAATTTCCAC C-AAGGGTCT GTGACGGTCC GTCACACCTG 92864 |||| | || |||||||| | ||||||||| | ||| |||| |||||||||| ||||| || | GTCGCAAGGT TCAGAGACTC -AATTTCCAC CAAAGAGTCT GTGACGGTCC GTCACGCCCG 357 TGACGGTCCG TCCTTCCATT CCGTCACAAA GTTCAGAGAG TCGATTTTTA GTACCCAATT 92804 |||||||||| || | ||||| |||| || || |||||||||| |||||||||| |||||||||| TGACGGTCCG TCGTGCCATT CCGTTACGAA GTTCAGAGAG TCGATTTTTA GTACCCAATT 417 TCAGATTTTC TAAGTGTTTT GAAATGAGAC CCTGCGACAG TCCGTCGTGC CCATGACGGT 92744 ||||| |||| |||||||||| |||| ||||| | |||| | ||| |||||| ||||||||| TCAGAATTTC TAAGTGTTTT GAAACGAGAC TCCTCGACGG TCCATCGTGC TCATGACGGT 477 CCGTCATGGG GTTCGTCGCT TCTGCCAGTT TTTCCAGAAA TAAAGTCTGC CGCTCAAAAT 92684 ||||| |||| | ||||| || || ||| |||||| ||| |||| ||||| ||||||| CCGTCGTGGG TTCCGTCGTC TCAACCTGTT TTTCCAAAAA TAAAATCTGC TACTCAAAAC 537 GACTAAACGG GTCGTTACA 92665 |||||||| | ||||||||| GACTAAACAG GTCGTTACA 556 hqPGS_C10HBa0115K16.1-_SGN-E550140- (93219 92665) ******************************************************************************** EST sequence 128 +strand 726 n (File: SGN-E550322+) 1 TCGCACCAGA TCGATTCTCC TTCTCTCTCT TTCTGTTCTT TTCTTTTTCT TATTCAAACC 61 CTCCTTCTTT TACCCTAATT AGCATATAAT TAAGAATAAA AGATGGAATA ATAACCCACT 121 AATTTACTCA AGGTTACCTC TTTTAACCCC CAGGTAATTA GACTTATTAA CATAAACCCA 181 CTAACTTTAT AATTAAAGTA GGAATAGTCC AAAACGTCCC TTAAAACGTG TAAAGAAATC 241 CGACCCAGAC TGGGATTACG CAACCTGTGA TGGCCCGTCG TGCCTGCGAC GGTCCGTCCT 301 GCAGGTCGTC GCAAGGTTCA GAGACTCAAT TTCCACCAAA GAGTCTGTGA CGGTCCGTCA 361 CGCCCGTGAC GGTCCGTCGT GCCATTCCGT TACGAAGTTC AGAGAGTCGA TTTTTAGTAC 421 CCAATTTCAG AATTTCTAAG TGTTTTGAAA CGAGACTCCT CGACGGTCCA TCGTGCTCAT 481 GACGGTCCGT CGTGGGTTCC GTCGTCTCAA CCTGTTTTTC CAAAAATAAA ATCTGCTACT 541 CAAAACGACT AAACAGGTCG TTACATTTAT GTTCTTCCTA CTTAAATATT ATTATTATTT 601 TACGATTTAT AACACTATTA GAAACAAAGA TTTTCTCAAC CATGAATTAA TGAAAAAATT 661 ATGCCATAAA ATATAAAAAA TTTACTCATT TTTCATTGAG CTAATTCATA AAAAAAAAAA 721 AAAAAC Predicted gene structure (within gDNA segment 94407 to 89410): Exon 1 93198 92665 ( 534 n); cDNA 35 565 ( 531 n); score: 0.860 PPA cDNA 708 725 MATCH C10HBa0115K16.1- SGN-E550322+ 0.860 534 0.736 C PGS_C10HBa0115K16.1-_SGN-E550322+ (93198 92665) Alignment (genomic DNA sequence = upper lines): GTTCTTTCTA TTTTCTTTAT TCCAACCCTA TTTCTTTTAC CCTAATTAGT ATATAATTAA 93139 ||||||| | |||| |||| || |||||| ||||||||| ||||||||| |||||||||| GTTCTTT-TC TTTTTCTTAT TCAAACCCTC CTTCTTTTAC CCTAATTAGC ATATAATTAA 93 GAATAAAAGA TGGCAATAAT ACCCCACTAA TTAACTTAGG GTTACCTCTT TTAACCCCTC 93079 |||||||||| ||| |||||| | |||||||| || ||| | | |||||||||| |||||||| | GAATAAAAGA TGG-AATAAT AACCCACTAA TTTACTCAAG GTTACCTCTT TTAACCCC-C 151 AAG-AATTTG AGTTATTAAT ATAAACCCAC GAACTTTATA ATTAAGGCAA GAATAGTCAA 93020 | | |||| | | ||||||| |||||||||| ||||||||| ||||| | | |||||||| | AGGTAATTAG ACTTATTAAC ATAAACCCAC TAACTTTATA ATTAAAGTAG GAATAGTCCA 211 AAACGTCCCT TAAAACTTAA CCAGAAATCC GACTCTGCCT GGGATTTGCA CAACCTGTGA 92960 |||||||||| |||||| | |||||||| ||| | | || |||| || | |||||||||| AAACGTCCCT TAAAACGTGT AAAGAAATCC GACCCAGACT GGGA-TTACG CAACCTGTGA 270 CGGGCCGTCG TGCCTGCGAC GGTCCGTCCT GCAGGTCGTC GTAGAGTTCA GAGACCCAAA 92900 || |||||| |||||||||| |||||||||| |||||||||| | | ||||| ||||| | || TGGCCCGTCG TGCCTGCGAC GGTCCGTCCT GCAGGTCGTC GCAAGGTTCA GAGACTC-AA 329 TTTCCACC-A AGGGTCTGTG ACGGTCCGTC ACACCTGTGA CGGTCCGTCC TTCCATTCCG 92841 |||||||| | || ||||||| |||||||||| || || |||| ||||||||| | |||||||| TTTCCACCAA AGAGTCTGTG ACGGTCCGTC ACGCCCGTGA CGGTCCGTCG TGCCATTCCG 389 TCACAAAGTT CAGAGAGTCG ATTTTTAGTA CCCAATTTCA GATTTTCTAA GTGTTTTGAA 92781 | || ||||| |||||||||| |||||||||| |||||||||| || ||||||| |||||||||| TTACGAAGTT CAGAGAGTCG ATTTTTAGTA CCCAATTTCA GAATTTCTAA GTGTTTTGAA 449 ATGAGACCCT GCGACAGTCC GTCGTGCCCA TGACGGTCCG TCATGGGGTT CGTCGCTTCT 92721 | ||||| | |||| |||| |||||| || |||||||||| || |||| | ||||| || ACGAGACTCC TCGACGGTCC ATCGTGCTCA TGACGGTCCG TCGTGGGTTC CGTCGTCTCA 509 GCCAGTTTTT CCAGAAATAA AGTCTGCCGC TCAAAATGAC TAAACGGGTC GTTACA 92665 || |||||| ||| |||||| | ||||| | |||||| ||| ||||| |||| |||||| ACCTGTTTTT CCAAAAATAA AATCTGCTAC TCAAAACGAC TAAACAGGTC GTTACA 565 hqPGS_C10HBa0115K16.1-_SGN-E550322+ (93198 92665) ******************************************************************************** EST sequence 59 -strand 674 n (File: SGN-E396057-) 1 TTTTTTATTC AAACCTTCTT TTTTTTACCC TAATTAGCAT ATAATTAAGA ATAAAAGATG 61 GAATAATAAC CCACTAATTT ACTCAAGGTT ACCTCTTTTA ACCCCCAGGT AATTAGACTT 121 ATTAACATAA ACCCACTAAC TTTATAATTA AAGTAGGAAT AGTCCAAAAC GTCCCTTAAA 181 ACGTGTAAAG AAATCCGACC CAGACTGGGA TTACGCAACC TGTGATGGCC CGTCGTGCCT 241 GCGACGGTCC GTCCTGCAGG TCGTCGCAAG GTTCAGAGAC TCAATTTCCA CCAAAGAGTC 301 TGTGACGGTC CGTCACGCCC GTGACGGTCC GTCGTGCCAT TCCGTTACGA AGTTCAGAGA 361 GTCGATTTTT AGTACCCAAT TTCAGAATTT TTAAGTGTTT TGAAACGAGA CTCCTCGACG 421 GTCCATCGTG CTCATGACGG TCCGTCGTGG GTTCCGTCGT CTCAACCTGT TTTTCCAAAA 481 ATAAAATCTG CTACTCAAAA CGACTAAACA GGTCGTTACA TTTATGTTCT TCCTACTTAA 541 ATATTATTAT TATTTTACGA TTTATAACAC TATTAGAAAC AAAGATTTTC TCAACCATGA 601 ATTAATGAAA AAATTATGCC ATAAAATATA AAAAATTTAC TCATTTTTCA TTGAGCTAAT 661 TCATAAAAAA AAAA Predicted gene structure (within gDNA segment 95855 to 89319): Exon 1 93186 92665 ( 522 n); cDNA 1 520 ( 520 n); score: 0.858 PPA cDNA 663 674 MATCH C10HBa0115K16.1- SGN-E396057- 0.858 522 0.774 C PGS_C10HBa0115K16.1-_SGN-E396057- (93186 92665) Alignment (genomic DNA sequence = upper lines): TTCTTTATTC CAACCCTATT TCTTTTACCC TAATTAGTAT ATAATTAAGA ATAAAAGATG 93127 || ||||||| |||| | || | |||||||| ||||||| || |||||||||| |||||||||| TTTTTTATTC AAACCTTCTT TTTTTTACCC TAATTAGCAT ATAATTAAGA ATAAAAGATG 60 GCAATAATAC CCCACTAATT AACTTAGGGT TACCTCTTTT AACCCCTCAA G-AATTTGAG 93068 | ||||||| |||||||||| ||| | ||| |||||||||| |||||| || | |||| || G-AATAATAA CCCACTAATT TACTCAAGGT TACCTCTTTT AACCCC-CAG GTAATTAGAC 118 TTATTAATAT AAACCCACGA ACTTTATAAT TAAGGCAAGA ATAGTCAAAA ACGTCCCTTA 93008 ||||||| || |||||||| | |||||||||| ||| | | || |||||| ||| |||||||||| TTATTAACAT AAACCCACTA ACTTTATAAT TAAAGTAGGA ATAGTCCAAA ACGTCCCTTA 178 AAACTTAACC AGAAATCCGA CTCTGCCTGG GATTTGCACA ACCTGTGACG GGCCGTCGTG 92948 |||| | |||||||||| | | | |||| || || | || |||||||| | | |||||||| AAACGTGTAA AGAAATCCGA CCCAGACTGG GA-TTACGCA ACCTGTGATG GCCCGTCGTG 237 CCTGCGACGG TCCGTCCTGC AGGTCGTCGT AGAGTTCAGA GACCCAAATT TCCACC-AAG 92889 |||||||||| |||||||||| ||||||||| | ||||||| ||| | |||| |||||| ||| CCTGCGACGG TCCGTCCTGC AGGTCGTCGC AAGGTTCAGA GACTC-AATT TCCACCAAAG 296 GGTCTGTGAC GGTCCGTCAC ACCTGTGACG GTCCGTCCTT CCATTCCGTC ACAAAGTTCA 92829 ||||||||| |||||||||| || |||||| ||||||| | ||||||||| || ||||||| AGTCTGTGAC GGTCCGTCAC GCCCGTGACG GTCCGTCGTG CCATTCCGTT ACGAAGTTCA 356 GAGAGTCGAT TTTTAGTACC CAATTTCAGA TTTTCTAAGT GTTTTGAAAT GAGACCCTGC 92769 |||||||||| |||||||||| |||||||||| ||| ||||| ||||||||| ||||| | | GAGAGTCGAT TTTTAGTACC CAATTTCAGA ATTTTTAAGT GTTTTGAAAC GAGACTCCTC 416 GACAGTCCGT CGTGCCCATG ACGGTCCGTC ATGGGGTTCG TCGCTTCTGC CAGTTTTTCC 92709 ||| |||| | ||||| |||| |||||||||| |||| | || ||| || | | |||||||| GACGGTCCAT CGTGCTCATG ACGGTCCGTC GTGGGTTCCG TCGTCTCAAC CTGTTTTTCC 476 AGAAATAAAG TCTGCCGCTC AAAATGACTA AACGGGTCGT TACA 92665 | ||||||| ||||| ||| |||| ||||| ||| |||||| |||| AAAAATAAAA TCTGCTACTC AAAACGACTA AACAGGTCGT TACA 520 hqPGS_C10HBa0115K16.1-_SGN-E396057- (93186 92665) ******************************************************************************** EST sequence 69 -strand 658 n (File: SGN-E377132-) 1 TTCCTTCTTT TACCCTAATT AGCATATATT TAAGAATAAA AGATGGAATA ATAACCCACT 61 AATTTACTCA AGGTTACCTC TTTTAACCCC CAGGTAATTA GACTTATTAA CATAAACCCA 121 CTAACTTTAT AATTAAAGTA GGAATAGTCC AAAACGTCCC TTAAAACGTG TAAAGAAATC 181 CGACCCAGAC TGGGATTACG CAACCTGTGA TGGCCCGTCG TGCCTGCGAC GGTCCGTCCT 241 GCAGGTCGTC GCAAGGTTCA GAGACTCAAT TTCCACCAAA GAGTCTGTGA CGGTCCGTCA 301 CGCCCGTGAC GGTCCGTCGT GCCATTCCGT TACGAAGTTC AGAGAGTCGA TTTTTAGTAC 361 CCAATTTCAG AATTTCTAAG TGTTTTGAAA CGAGACTCCT CGACGGTCCA TCGTGCTCAT 421 GACGGTCCGT CGTGGGTTCC GTCGTCTCAA CCTGTTTTTC CAAAAATAAA ATCTGCTACT 481 CAAAACGACT AAACAGGTCG TTACATTTAT GTTCTTCCTA CTTAAATATT ATTATTATTT 541 TACGATTTAT AACACTATTA GAAACAAAGA TTTTCTCAAC CATGAATTAA TGAAAAAATT 601 ATGCCATAAA ATATAAAAAA TTTACTCATT TTTCATTGAG CTAATTCATA AAAAAAAA Predicted gene structure (within gDNA segment 93817 to 88900): Exon 1 93167 92665 ( 503 n); cDNA 5 505 ( 501 n); score: 0.863 PPA cDNA 648 658 MATCH C10HBa0115K16.1- SGN-E377132- 0.863 503 0.764 C PGS_C10HBa0115K16.1-_SGN-E377132- (93167 92665) Alignment (genomic DNA sequence = upper lines): TTCTTTTACC CTAATTAGTA TATAATTAAG AATAAAAGAT GGCAATAATA CCCCACTAAT 93108 |||||||||| |||||||| | |||| ||||| |||||||||| || ||||||| ||||||||| TTCTTTTACC CTAATTAGCA TATATTTAAG AATAAAAGAT GG-AATAATA ACCCACTAAT 63 TAACTTAGGG TTACCTCTTT TAACCCCTCA AG-AATTTGA GTTATTAATA TAAACCCACG 93049 | ||| | || |||||||||| ||||||| || | |||| || ||||||| | ||||||||| TTACTCAAGG TTACCTCTTT TAACCCC-CA GGTAATTAGA CTTATTAACA TAAACCCACT 122 AACTTTATAA TTAAGGCAAG AATAGTCAAA AACGTCCCTT AAAACTTAAC CAGAAATCCG 92989 |||||||||| |||| | | | ||||||| || |||||||||| ||||| | ||||||||| AACTTTATAA TTAAAGTAGG AATAGTCCAA AACGTCCCTT AAAACGTGTA AAGAAATCCG 182 ACTCTGCCTG GGATTTGCAC AACCTGTGAC GGGCCGTCGT GCCTGCGACG GTCCGTCCTG 92929 || | | ||| ||| || | | ||||||||| || ||||||| |||||||||| |||||||||| ACCCAGACTG GGA-TTACGC AACCTGTGAT GGCCCGTCGT GCCTGCGACG GTCCGTCCTG 241 CAGGTCGTCG TAGAGTTCAG AGACCCAAAT TTCCACC-AA GGGTCTGTGA CGGTCCGTCA 92870 |||||||||| | |||||| |||| | ||| ||||||| || | |||||||| |||||||||| CAGGTCGTCG CAAGGTTCAG AGACTC-AAT TTCCACCAAA GAGTCTGTGA CGGTCCGTCA 300 CACCTGTGAC GGTCCGTCCT TCCATTCCGT CACAAAGTTC AGAGAGTCGA TTTTTAGTAC 92810 | || ||||| |||||||| | ||||||||| || |||||| |||||||||| |||||||||| CGCCCGTGAC GGTCCGTCGT GCCATTCCGT TACGAAGTTC AGAGAGTCGA TTTTTAGTAC 360 CCAATTTCAG ATTTTCTAAG TGTTTTGAAA TGAGACCCTG CGACAGTCCG TCGTGCCCAT 92750 |||||||||| | |||||||| |||||||||| ||||| | |||| |||| |||||| ||| CCAATTTCAG AATTTCTAAG TGTTTTGAAA CGAGACTCCT CGACGGTCCA TCGTGCTCAT 420 GACGGTCCGT CATGGGGTTC GTCGCTTCTG CCAGTTTTTC CAGAAATAAA GTCTGCCGCT 92690 |||||||||| | |||| | | |||| || || ||||||| || ||||||| ||||| || GACGGTCCGT CGTGGGTTCC GTCGTCTCAA CCTGTTTTTC CAAAAATAAA ATCTGCTACT 480 CAAAATGACT AAACGGGTCG TTACA 92665 ||||| |||| |||| ||||| ||||| CAAAACGACT AAACAGGTCG TTACA 505 hqPGS_C10HBa0115K16.1-_SGN-E377132- (93167 92665) ******************************************************************************** EST sequence 57 -strand 647 n (File: SGN-E396055-) 1 ATTAGCATAT AATTAAGAAT AAAAAGATGG AAATAATAAC CCACTAATTT ACTCAAGGGT 61 TCCTTTTTTT AACCCCCAGG GTAATTAGAC TTATTAACAT AAACCCCACT AACTTTATAA 121 TTAAAGTAGG AATAGTCCAA AACGTCCCTT AAAACGTGTA AAGAAATCCG ACCCAGACTG 181 GGATTACGCA ACCTGTGATG GCCCGTCGTG CCTGCGACGG TCCGTCCTGC AGGTCGTCGC 241 AAGGTTCAGA GACTCAATTT CCACCAAAGA GTCTGTGACG GTCCGTCACG CCCGTGACGG 301 TCCGTCGTGC CATTCCGTTA CGAAGTTCAG AGAGTCGATT TTTAGTACCC AATTTCAGAA 361 TTTCTAAGTG TTTTGAAACG AGACTCCTCG ACGGTCCATC GTGCTCATGA CGGTCCGTCG 421 TGGGTTCCGT CGTCTCAACC TGTTTTTCCA AAAATAAAAT CTGCTACTCA AAACGACTAA 481 ACAGGTCGTT ACATTTATGT TCTTCCTACT TAAATATTAT TATTATTTTA CGATTTATAA 541 CACTATTAGA AACAAAGATT TTCTCAACCA TGAATTAATG AAAAAATTAT GCCATAAAAT 601 ATAAAAAATT TACTCATTTT TCATTGAGCT AATTCATAAA AAAAAAA Predicted gene structure (within gDNA segment 95585 to 88290): Exon 1 93154 92665 ( 490 n); cDNA 1 493 ( 493 n); score: 0.838 PPA cDNA 636 647 MATCH C10HBa0115K16.1- SGN-E396055- 0.838 490 0.757 C PGS_C10HBa0115K16.1-_SGN-E396055- (93154 92665) Alignment (genomic DNA sequence = upper lines): ATTAGTATAT AATTAAGAAT -AAAAGATGG CAATAATACC CCACTAATTA ACT-TAGGGT 93097 ||||| |||| |||||||||| ||||||||| ||||||| | ||||||||| ||| ||||| ATTAGCATAT AATTAAGAAT AAAAAGATGG AAATAATAAC CCACTAATTT ACTCAAGGGT 60 TACCTCTTTT AACCCCTCAA G-AATTTGAG TTATTAATAT AAA-CCCACG AACTTTATAA 93039 | | | |||| |||||| | |||| || ||||||| || ||| ||||| |||||||||| TCCTTTTTTT AACCCCCAGG GTAATTAGAC TTATTAACAT AAACCCCACT AACTTTATAA 120 TTAAGGCAAG AATAGTCAAA AACGTCCCTT AAAACTTAAC CAGAAATCCG ACTCTGCCTG 92979 |||| | | | ||||||| || |||||||||| ||||| | ||||||||| || | | ||| TTAAAGTAGG AATAGTCCAA AACGTCCCTT AAAACGTGTA AAGAAATCCG ACCCAGACTG 180 GGATTTGCAC AACCTGTGAC GGGCCGTCGT GCCTGCGACG GTCCGTCCTG CAGGTCGTCG 92919 ||| || | | ||||||||| || ||||||| |||||||||| |||||||||| |||||||||| GGA-TTACGC AACCTGTGAT GGCCCGTCGT GCCTGCGACG GTCCGTCCTG CAGGTCGTCG 239 TAGAGTTCAG AGACCCAAAT TTCCACC-AA GGGTCTGTGA CGGTCCGTCA CACCTGTGAC 92860 | |||||| |||| | ||| ||||||| || | |||||||| |||||||||| | || ||||| CAAGGTTCAG AGACTC-AAT TTCCACCAAA GAGTCTGTGA CGGTCCGTCA CGCCCGTGAC 298 GGTCCGTCCT TCCATTCCGT CACAAAGTTC AGAGAGTCGA TTTTTAGTAC CCAATTTCAG 92800 |||||||| | ||||||||| || |||||| |||||||||| |||||||||| |||||||||| GGTCCGTCGT GCCATTCCGT TACGAAGTTC AGAGAGTCGA TTTTTAGTAC CCAATTTCAG 358 ATTTTCTAAG TGTTTTGAAA TGAGACCCTG CGACAGTCCG TCGTGCCCAT GACGGTCCGT 92740 | |||||||| |||||||||| ||||| | |||| |||| |||||| ||| |||||||||| AATTTCTAAG TGTTTTGAAA CGAGACTCCT CGACGGTCCA TCGTGCTCAT GACGGTCCGT 418 CATGGGGTTC GTCGCTTCTG CCAGTTTTTC CAGAAATAAA GTCTGCCGCT CAAAATGACT 92680 | |||| | | |||| || || ||||||| || ||||||| ||||| || ||||| |||| CGTGGGTTCC GTCGTCTCAA CCTGTTTTTC CAAAAATAAA ATCTGCTACT CAAAACGACT 478 AAACGGGTCG TTACA 92665 |||| ||||| ||||| AAACAGGTCG TTACA 493 hqPGS_C10HBa0115K16.1-_SGN-E396055- (93154 92665) ******************************************************************************** EST sequence 55 -strand 640 n (File: SGN-E398551-) 1 TAGCATATAA TTAAGAATAA AAGATGGAAT AATAACCCAA TAATTTACTC AAGGTTACCT 61 CTTTTAACCC CCAGGTAATT AGACTTATTA ACATAAACCC ACTAACTTTA TAATTAAAGT 121 AGGAATAGTC CAAAACGTCC CTTAAAACGT GTAAAGAAAT CCGACCCAGA CTGGGATTAC 181 GCAACCTGTG ATGGCCCGTC GTGCCTGCGA CGGTCCGTCC TGCAGGTCGT CGCAAGGTTC 241 AGAGACTCAA TTTCCACCAA AGAGTCTGTG ACGGTCCGTC ACGCCCGTGA CGGTCCGTCG 301 TGCCATTCCG TTACGAAGTT CAGAGAGTCG ATTTTTAGTA CCCAATTTCA GAATTTCTAA 361 GTGTTTTGAA ACGAGACTCC TCGACGGTCC ATCGTGCTCA TGACGGTCCG TCGTGGGTTC 421 CGTCGTCTCA ACCTGTTTTT CCAAAAATAA AATCTGCTAC TCAAAACGAC TAAACAGGTC 481 GTTACATTTA TGTTCTTCCT ACTTAAATAT TATTATTATT TTACGATTTA TAACACTATT 541 AGAAACAAAG ATTTTCTCAA CCATGAATTA ATGAAAAAAT TATGCCATAA AATATAAAAA 601 ATTTACTCAT TTTTCATTGA GCTAATTCAT AAAAAAAAAA Predicted gene structure (within gDNA segment 95515 to 88290): Exon 1 93152 92665 ( 488 n); cDNA 1 486 ( 486 n); score: 0.858 PPA cDNA 629 640 MATCH C10HBa0115K16.1- SGN-E398551- 0.858 488 0.762 C PGS_C10HBa0115K16.1-_SGN-E398551- (93152 92665) Alignment (genomic DNA sequence = upper lines): TAGTATATAA TTAAGAATAA AAGATGGCAA TAATACCCCA CTAATTAACT TAGGGTTACC 93093 ||| |||||| |||||||||| ||||||| || ||||| |||| ||||| ||| | ||||||| TAGCATATAA TTAAGAATAA AAGATGG-AA TAATAACCCA ATAATTTACT CAAGGTTACC 59 TCTTTTAACC CCTCAAGAAT TTGAGTTATT AATATAAACC CACGAACTTT ATAATTAAGG 93033 |||||||||| || ||| | || ||||| || ||||||| ||| |||||| |||||||| | TCTTTTAACC CCCAGGTAAT TAGACTTATT AACATAAACC CACTAACTTT ATAATTAAAG 119 CAAGAATAGT CAAAAACGTC CCTTAAAACT TAACCAGAAA TCCGACTCTG CCTGGGATTT 92973 | ||||||| | |||||||| ||||||||| | ||||| |||||| | | |||||| || TAGGAATAGT CCAAAACGTC CCTTAAAACG TGTAAAGAAA TCCGACCCAG ACTGGGA-TT 178 GCACAACCTG TGACGGGCCG TCGTGCCTGC GACGGTCCGT CCTGCAGGTC GTCGTAGAGT 92913 | ||||||| ||| || ||| |||||||||| |||||||||| |||||||||| |||| | || ACGCAACCTG TGATGGCCCG TCGTGCCTGC GACGGTCCGT CCTGCAGGTC GTCGCAAGGT 238 TCAGAGACCC AAATTTCCAC C-AAGGGTCT GTGACGGTCC GTCACACCTG TGACGGTCCG 92854 |||||||| | ||||||||| | ||| |||| |||||||||| ||||| || | |||||||||| TCAGAGACTC -AATTTCCAC CAAAGAGTCT GTGACGGTCC GTCACGCCCG TGACGGTCCG 297 TCCTTCCATT CCGTCACAAA GTTCAGAGAG TCGATTTTTA GTACCCAATT TCAGATTTTC 92794 || | ||||| |||| || || |||||||||| |||||||||| |||||||||| ||||| |||| TCGTGCCATT CCGTTACGAA GTTCAGAGAG TCGATTTTTA GTACCCAATT TCAGAATTTC 357 TAAGTGTTTT GAAATGAGAC CCTGCGACAG TCCGTCGTGC CCATGACGGT CCGTCATGGG 92734 |||||||||| |||| ||||| | |||| | ||| |||||| ||||||||| ||||| |||| TAAGTGTTTT GAAACGAGAC TCCTCGACGG TCCATCGTGC TCATGACGGT CCGTCGTGGG 417 GTTCGTCGCT TCTGCCAGTT TTTCCAGAAA TAAAGTCTGC CGCTCAAAAT GACTAAACGG 92674 | ||||| || || ||| |||||| ||| |||| ||||| ||||||| |||||||| | TTCCGTCGTC TCAACCTGTT TTTCCAAAAA TAAAATCTGC TACTCAAAAC GACTAAACAG 477 GTCGTTACA 92665 ||||||||| GTCGTTACA 486 hqPGS_C10HBa0115K16.1-_SGN-E398551- (93152 92665) ******************************************************************************** EST sequence 53 -strand 630 n (File: SGN-E396038-) 1 TTAAGAATAA AAGATGGAAT AATAACCCAC TAATTTACTC AAGGTTACCT CTTTTAACCC 61 CCAGGTAATT AGACTTATTA ACATAAACCC ACTAACTTTA TAATTAAAGT AGGAATAGTC 121 CAAAACGTCC CTTAAAACGT GTAAAGAAAT CCGACCCAGA CTGGGATTAC GCAACCTGTG 181 ATGGCCCGTC GTGCCTGCGA CGGTCCGTCC TGCAGGTCGT CGCAAGGTTC AGAGACTCAA 241 TTTCCACCAA AGAGTCTGTG ACGGTCCGTC ACGCCCGTGA CGGTCCGTCG TGCCATTCCG 301 TTACGAAGTT CAGAGAGTCG ATTTTTAGTA CCCAATTTCA GAATTTCTAA GTGTTTTGAA 361 ACGAGACTCC TCGACGGTCC ATCGTGCTCA TGACGGTCCG TCGTGGGTTC CGTCGTCTCA 421 ACCTGTTTTT CCAAAAATAA AATCTGCTAC TCAAAACGAC TAAACAGGTC GTTACATTTA 481 TGTTCTTCCT ACTTAAATAT TATTATTATT TTACGATTTA TAACACTATT AGAAACAAAG 541 ATTTTCTCAA CCATGAATTA ATGAAAAAAT TATGCCATAA AATATAAAAA ATTTACTCAT 601 TTTTCATAGA GTTAAATAAT AAAAAAAAAA Predicted gene structure (within gDNA segment 95415 to 88290): Exon 1 93142 92665 ( 478 n); cDNA 1 476 ( 476 n); score: 0.859 PPA cDNA 621 630 MATCH C10HBa0115K16.1- SGN-E396038- 0.859 478 0.759 C PGS_C10HBa0115K16.1-_SGN-E396038- (93142 92665) Alignment (genomic DNA sequence = upper lines): TTAAGAATAA AAGATGGCAA TAATACCCCA CTAATTAACT TAGGGTTACC TCTTTTAACC 93083 |||||||||| ||||||| || ||||| |||| |||||| ||| | ||||||| |||||||||| TTAAGAATAA AAGATGG-AA TAATAACCCA CTAATTTACT CAAGGTTACC TCTTTTAACC 59 CCTCAAGAAT TTGAGTTATT AATATAAACC CACGAACTTT ATAATTAAGG CAAGAATAGT 93023 || ||| | || ||||| || ||||||| ||| |||||| |||||||| | | ||||||| CCCAGGTAAT TAGACTTATT AACATAAACC CACTAACTTT ATAATTAAAG TAGGAATAGT 119 CAAAAACGTC CCTTAAAACT TAACCAGAAA TCCGACTCTG CCTGGGATTT GCACAACCTG 92963 | |||||||| ||||||||| | ||||| |||||| | | |||||| || | ||||||| CCAAAACGTC CCTTAAAACG TGTAAAGAAA TCCGACCCAG ACTGGGA-TT ACGCAACCTG 178 TGACGGGCCG TCGTGCCTGC GACGGTCCGT CCTGCAGGTC GTCGTAGAGT TCAGAGACCC 92903 ||| || ||| |||||||||| |||||||||| |||||||||| |||| | || |||||||| | TGATGGCCCG TCGTGCCTGC GACGGTCCGT CCTGCAGGTC GTCGCAAGGT TCAGAGACTC 238 AAATTTCCAC C-AAGGGTCT GTGACGGTCC GTCACACCTG TGACGGTCCG TCCTTCCATT 92844 ||||||||| | ||| |||| |||||||||| ||||| || | |||||||||| || | ||||| -AATTTCCAC CAAAGAGTCT GTGACGGTCC GTCACGCCCG TGACGGTCCG TCGTGCCATT 297 CCGTCACAAA GTTCAGAGAG TCGATTTTTA GTACCCAATT TCAGATTTTC TAAGTGTTTT 92784 |||| || || |||||||||| |||||||||| |||||||||| ||||| |||| |||||||||| CCGTTACGAA GTTCAGAGAG TCGATTTTTA GTACCCAATT TCAGAATTTC TAAGTGTTTT 357 GAAATGAGAC CCTGCGACAG TCCGTCGTGC CCATGACGGT CCGTCATGGG GTTCGTCGCT 92724 |||| ||||| | |||| | ||| |||||| ||||||||| ||||| |||| | ||||| GAAACGAGAC TCCTCGACGG TCCATCGTGC TCATGACGGT CCGTCGTGGG TTCCGTCGTC 417 TCTGCCAGTT TTTCCAGAAA TAAAGTCTGC CGCTCAAAAT GACTAAACGG GTCGTTACA 92665 || || ||| |||||| ||| |||| ||||| ||||||| |||||||| | ||||||||| TCAACCTGTT TTTCCAAAAA TAAAATCTGC TACTCAAAAC GACTAAACAG GTCGTTACA 476 hqPGS_C10HBa0115K16.1-_SGN-E396038- (93142 92665) ******************************************************************************** EST sequence 61 -strand 525 n (File: SGN-E396069-) 1 AAAGTAGGAA TAGTCCAAAA CGTCCCTTAA AACGTGTAAA GAAATCCGAC CCCCACCGGG 61 ATTACGCAAC CTGTGATGGC CCGTCGTGCC TGCGACGGTC CGTCCTGCAG GTCGTCGCAA 121 GGTTCAGAGA CTCAATTTCC ACCAAAGAGT CTGTGACGGT CCGTCACGCC CGTGACGGTC 181 CGTCGTGCCA TTCCGTTACG AAGTTCAGAG AGTCGATTTT TAGTACCCAA TTTCAGAATT 241 TCTAAGTGTT TTGAAACGAG ACTCCTCGAC GGTCCATCGT GCTCATGACG GTCCGTCGTG 301 GGTTCCGTCG TCTCAACCTG TTTTTCCAAA AATAAAATCT GCTACTCAAA ACGACTAAAC 361 AGGTCGTTAC ATTTATGTTC TTCCTACTTA AATATTATTA TTATTTTACG ATTTATAACA 421 CTATTAGAAA CAAAGATTTT CTCAACCATG AATTAATGAA AAAATTATGC CATAAAATAT 481 AAAAAATTTA CTCATTTTTC ATTGAGCTAA TTCATAAAAA AAAAA Predicted gene structure (within gDNA segment 94365 to 88290): Exon 1 93036 92665 ( 372 n); cDNA 1 371 ( 371 n); score: 0.851 PPA cDNA 514 525 MATCH C10HBa0115K16.1- SGN-E396069- 0.851 372 0.709 C PGS_C10HBa0115K16.1-_SGN-E396069- (93036 92665) Alignment (genomic DNA sequence = upper lines): AAGGCAAGAA TAGTCAAAAA CGTCCCTTAA AACTTAACCA GAAATCCGAC TCTGCCTGGG 92977 || | | ||| ||||| |||| |||||||||| ||| | | |||||||||| | | ||| AAAGTAGGAA TAGTCCAAAA CGTCCCTTAA AACGTGTAAA GAAATCCGAC CCCCACCGGG 60 ATTTGCACAA CCTGTGACGG GCCGTCGTGC CTGCGACGGT CCGTCCTGCA GGTCGTCGTA 92917 | || | ||| ||||||| || ||||||||| |||||||||| |||||||||| |||||||| | A-TTACGCAA CCTGTGATGG CCCGTCGTGC CTGCGACGGT CCGTCCTGCA GGTCGTCGCA 119 GAGTTCAGAG ACCCAAATTT CCACC-AAGG GTCTGTGACG GTCCGTCACA CCTGTGACGG 92858 |||||||| || | ||||| ||||| ||| |||||||||| ||||||||| || ||||||| AGGTTCAGAG ACTC-AATTT CCACCAAAGA GTCTGTGACG GTCCGTCACG CCCGTGACGG 178 TCCGTCCTTC CATTCCGTCA CAAAGTTCAG AGAGTCGATT TTTAGTACCC AATTTCAGAT 92798 |||||| | | |||||||| | | |||||||| |||||||||| |||||||||| ||||||||| TCCGTCGTGC CATTCCGTTA CGAAGTTCAG AGAGTCGATT TTTAGTACCC AATTTCAGAA 238 TTTCTAAGTG TTTTGAAATG AGACCCTGCG ACAGTCCGTC GTGCCCATGA CGGTCCGTCA 92738 |||||||||| |||||||| | |||| | || || |||| || |||| ||||| ||||||||| TTTCTAAGTG TTTTGAAACG AGACTCCTCG ACGGTCCATC GTGCTCATGA CGGTCCGTCG 298 TGGGGTTCGT CGCTTCTGCC AGTTTTTCCA GAAATAAAGT CTGCCGCTCA AAATGACTAA 92678 |||| | ||| || || || ||||||||| ||||||| | |||| |||| ||| |||||| TGGGTTCCGT CGTCTCAACC TGTTTTTCCA AAAATAAAAT CTGCTACTCA AAACGACTAA 358 ACGGGTCGTT ACA 92665 || ||||||| ||| ACAGGTCGTT ACA 371 hqPGS_C10HBa0115K16.1-_SGN-E396069- (93036 92665) ******************************************************************************** EST sequence 51 -strand 519 n (File: SGN-E374998-) 1 GGAATAGTAC ATAACGTCCC TTAAAACGTG TAAAAGAAAT CCGACCCAGA CTGGGATTAC 61 GCAACCTGTG ATGGCCCGTC GTGCCTGCGA CGGTCCGTCC TGCAGGTCGT CGCAAGGTTC 121 AGAGACTCAA TTTCCACCAA AGAGTCTGTG ACGGTCCGTC ACGCCCGTGA CGGTCCGTCG 181 TGCCATTCCG TTACGAAGTT CAGAGAGTCG ATTTTTAGTA CCCAATTTCA GAATTTCTAA 241 GTGTTTTGAA ACGAGACTCC TCGACGGTCC ATCGTGCTCA TGACGGTCCG TCGTGGGTTC 301 CGTCGTCTCA ACCTGTTTTT CCAAAAATAA AATCTGCTAC TCAAAACGAC TAAACAGGTC 361 GTTACATTTA TGTTCTTCCT ACTTAAATAT TATTATTATT TTACGATTTA TAACACTATT 421 AGAAACAAAG ATTTTCTCAA CCATGAATTA ATGAAAAAAT TATGCCATAA AATATAAAAA 481 ATTTACTCAT TTTTCATTGA GCTAATTCAT AAAAAAAAA Predicted gene structure (within gDNA segment 94315 to 88900): Exon 1 93029 92665 ( 365 n); cDNA 2 366 ( 365 n); score: 0.852 PPA cDNA 509 519 MATCH C10HBa0115K16.1- SGN-E374998- 0.852 365 0.703 C PGS_C10HBa0115K16.1-_SGN-E374998- (93029 92665) Alignment (genomic DNA sequence = upper lines): GAATAGTCAA AAACGTCCCT TAAAAC-TTA ACCAGAAATC CGACTCTGCC TGGGATTTGC 92971 ||||||| | ||||||||| |||||| | | ||||||| |||| | | | ||||| || | GAATAGTACA TAACGTCCCT TAAAACGTGT AAAAGAAATC CGACCCAGAC TGGGA-TTAC 60 ACAACCTGTG ACGGGCCGTC GTGCCTGCGA CGGTCCGTCC TGCAGGTCGT CGTAGAGTTC 92911 ||||||||| | || ||||| |||||||||| |||||||||| |||||||||| || | |||| GCAACCTGTG ATGGCCCGTC GTGCCTGCGA CGGTCCGTCC TGCAGGTCGT CGCAAGGTTC 120 AGAGACCCAA ATTTCCACC- AAGGGTCTGT GACGGTCCGT CACACCTGTG ACGGTCCGTC 92852 |||||| | | ||||||||| ||| |||||| |||||||||| ||| || ||| |||||||||| AGAGACTC-A ATTTCCACCA AAGAGTCTGT GACGGTCCGT CACGCCCGTG ACGGTCCGTC 179 CTTCCATTCC GTCACAAAGT TCAGAGAGTC GATTTTTAGT ACCCAATTTC AGATTTTCTA 92792 | ||||||| || || |||| |||||||||| |||||||||| |||||||||| ||| |||||| GTGCCATTCC GTTACGAAGT TCAGAGAGTC GATTTTTAGT ACCCAATTTC AGAATTTCTA 239 AGTGTTTTGA AATGAGACCC TGCGACAGTC CGTCGTGCCC ATGACGGTCC GTCATGGGGT 92732 |||||||||| || ||||| | |||| ||| | |||||| | |||||||||| ||| |||| | AGTGTTTTGA AACGAGACTC CTCGACGGTC CATCGTGCTC ATGACGGTCC GTCGTGGGTT 299 TCGTCGCTTC TGCCAGTTTT TCCAGAAATA AAGTCTGCCG CTCAAAATGA CTAAACGGGT 92672 ||||| || || ||||| |||| ||||| || ||||| ||||||| || |||||| ||| CCGTCGTCTC AACCTGTTTT TCCAAAAATA AAATCTGCTA CTCAAAACGA CTAAACAGGT 359 CGTTACA 92665 ||||||| CGTTACA 366 hqPGS_C10HBa0115K16.1-_SGN-E374998- (93029 92665) ******************************************************************************** EST sequence 241 +strand 548 n (File: SGN-E356257+) 1 AAAACACTTA GAAAATCTGA AATTGGGTAC TGAAAATCGA CTCTCTGAAC TTCGTGACGG 61 AATGACAGGA CGGACCATCA CAGGCGTGAC GGACCGTCAT AGATTGTTCA GTGGAAATTG 121 ACTCTCTGAC CCTTGCGACG ACCTGCAGGA CGGACCGTCA CAGTCACGAC GGCCCGTCAC 181 AGGTTGCGCA AATCCCAGGC AGAATCGGAT TTCCTTACAC GTTTTAAGGG ACGTTTTTGG 241 ACTATTCTTT CCTTAATTAT AGATTTCGTG GGTTTATATT AATAACTCAA ATTCTTGGGG 301 TTAAAAGAGG TAACCCTAAG TTAATTAGTG GGGTATTATT GCCATCTTTT ATTCTTAATT 361 ATATGTTAAT TTGGGGTAAA AGAAAGAGGG TTTTGAAACG AGACCCTGCG ATGGTCCGTC 421 GTGCCCATGA CGGTCCGTCG TGGGGTCCGT CGCTTCTGCC AGTTTTTCCA GAAATAAAGT 481 CTGCTGCTCA AAACGACTAA ACGGGTCGTT ACATTATTTG ACTCTATCAC TTTAATTTTC 541 TAGTTAAC Predicted gene structure (within gDNA segment 97494 to 91705): Exon 1 92791 92665 ( 127 n); cDNA 387 513 ( 127 n); score: 0.937 MATCH C10HBa0115K16.1- SGN-E356257+ 0.937 127 0.232 C PGS_C10HBa0115K16.1-_SGN-E356257+ (92791 92665) Alignment (genomic DNA sequence = upper lines): AGTGTTTTGA AATGAGACCC TGCGACAGTC CGTCGTGCCC ATGACGGTCC GTCATGGGGT 92732 || ||||||| || ||||||| ||||| ||| |||||||||| |||||||||| ||| |||||| AGGGTTTTGA AACGAGACCC TGCGATGGTC CGTCGTGCCC ATGACGGTCC GTCGTGGGGT 446 TCGTCGCTTC TGCCAGTTTT TCCAGAAATA AAGTCTGCCG CTCAAAATGA CTAAACGGGT 92672 ||||||||| |||||||||| |||||||||| |||||||| | ||||||| || |||||||||| CCGTCGCTTC TGCCAGTTTT TCCAGAAATA AAGTCTGCTG CTCAAAACGA CTAAACGGGT 506 CGTTACA 92665 ||||||| CGTTACA 513 hqPGS_C10HBa0115K16.1-_SGN-E356257+ (92791 92665) ******************************************************************************** EST sequence 270 +strand 545 n (File: SGN-E241959+) 1 TCGATTCTCC TTCTCTCTCT TTCTGTTCTT TTCTTTTTCT TATTCAAACC CTCCTTCTTT 61 TACCCTAATT AGCATATAAT TAAGAATAAA AGATGGAATA ATAACCCACT AATTTACTCA 121 AGGTTACCTC TTTTAACCCC CAGGTAATTA GACTTATTAA CATAAACCCA CTAACTTTAT 181 AATTAAAGTA GGAATAGTCC AAAACGTCCC TTAAAACGTG TAAAGAAATC CGACCCAGAC 241 TGGGATTACG CAACCTGTGA TGGCCCGTCG TGCCTGCGAC GGTCCGTCCT GCAGGTCGTC 301 GCAAGGTTCA GAGACTCAAT TTCCACCAAA GAGTCTGTGA CGGTCCGTCA CGCCCGTGAC 361 GGTCCGTCGT GCCATTCCGT TACGAAGTTC AGAGAGTCGA TTTTTAGTAC CCAATTTCAG 421 AATTTCTAAG TGTTTTGAAA CGAGACTCCT CGACGGTCCA TCGTGCTCAT GACGGTCCGT 481 CGTGGGTTCC GTCGTCTCAA CCTGTTTTTC CAAAAATAAA ATCTGCTACT CAAAACGACT 541 AAACA Predicted gene structure (within gDNA segment 94307 to 91120): Exon 1 93219 92676 ( 544 n); cDNA 1 544 ( 544 n); score: 0.847 MATCH C10HBa0115K16.1- SGN-E241959+ 0.847 544 0.998 C PGS_C10HBa0115K16.1-_SGN-E241959+ (93219 92676) Alignment (genomic DNA sequence = upper lines): TCGATTCTCC CTCTCTCTCT -TGT-TCTTT CTATTTTCTT TATTCCAACC CTATTTCTTT 93162 |||||||||| ||||||||| | | | || | |||| | ||||| |||| || |||||| TCGATTCTCC TTCTCTCTCT TTCTGTTCTT TTCTTTTTCT TATTCAAACC CTCCTTCTTT 60 TACCCTAATT AGTATATAAT TAAGAATAAA AGATGGCAAT AATACCCCAC TAATTAACTT 93102 |||||||||| || ||||||| |||||||||| |||||| ||| |||| ||||| ||||| ||| TACCCTAATT AGCATATAAT TAAGAATAAA AGATGG-AAT AATAACCCAC TAATTTACTC 119 AGGGTTACCT CTTTTAACCC CTCAAG-AAT TTGAGTTATT AATATAAACC CACGAACTTT 93043 | |||||||| |||||||||| | || | ||| | || ||||| || ||||||| ||| |||||| AAGGTTACCT CTTTTAACCC C-CAGGTAAT TAGACTTATT AACATAAACC CACTAACTTT 178 ATAATTAAGG CAAGAATAGT CAAAAACGTC CCTTAAAACT TAACCAGAAA TCCGACTCTG 92983 |||||||| | | ||||||| | |||||||| ||||||||| | ||||| |||||| | | ATAATTAAAG TAGGAATAGT CCAAAACGTC CCTTAAAACG TGTAAAGAAA TCCGACCCAG 238 CCTGGGATTT GCACAACCTG TGACGGGCCG TCGTGCCTGC GACGGTCCGT CCTGCAGGTC 92923 |||||| || | ||||||| ||| || ||| |||||||||| |||||||||| |||||||||| ACTGGGA-TT ACGCAACCTG TGATGGCCCG TCGTGCCTGC GACGGTCCGT CCTGCAGGTC 297 GTCGTAGAGT TCAGAGACCC AAATTTCCAC C-AAGGGTCT GTGACGGTCC GTCACACCTG 92864 |||| | || |||||||| | ||||||||| | ||| |||| |||||||||| ||||| || | GTCGCAAGGT TCAGAGACTC -AATTTCCAC CAAAGAGTCT GTGACGGTCC GTCACGCCCG 356 TGACGGTCCG TCCTTCCATT CCGTCACAAA GTTCAGAGAG TCGATTTTTA GTACCCAATT 92804 |||||||||| || | ||||| |||| || || |||||||||| |||||||||| |||||||||| TGACGGTCCG TCGTGCCATT CCGTTACGAA GTTCAGAGAG TCGATTTTTA GTACCCAATT 416 TCAGATTTTC TAAGTGTTTT GAAATGAGAC CCTGCGACAG TCCGTCGTGC CCATGACGGT 92744 ||||| |||| |||||||||| |||| ||||| | |||| | ||| |||||| ||||||||| TCAGAATTTC TAAGTGTTTT GAAACGAGAC TCCTCGACGG TCCATCGTGC TCATGACGGT 476 CCGTCATGGG GTTCGTCGCT TCTGCCAGTT TTTCCAGAAA TAAAGTCTGC CGCTCAAAAT 92684 ||||| |||| | ||||| || || ||| |||||| ||| |||| ||||| ||||||| CCGTCGTGGG TTCCGTCGTC TCAACCTGTT TTTCCAAAAA TAAAATCTGC TACTCAAAAC 536 GACTAAAC 92676 |||||||| GACTAAAC 544 hqPGS_C10HBa0115K16.1-_SGN-E241959+ (93219 92676) ******************************************************************************** EST sequence 103 -strand 660 n (File: SGN-E349296-) 1 AATATTATCA ATACATATTA TTCGCTATTA AGAGCTTACT ACGAATATCG TAAGAGAAAC 61 CATAACCTAC CTCCACCGAA GATTCGTGAT CAAGCAAGTG ATTTCCCAAG CTTTGTGTTT 121 TTTCCTCTCG TTCGATCCTC TTTCTCGTTC GACTTTCTCT CTCTTTCTCT TGTTCTTTCT 181 ATTTTCTTTA TTCAAACCCT CTTTCTTTTA CCCTAATTAG TATATAATTA AGAATAAAAT 241 ATGGCAATAA TAACCCACTA ATTAACTTAA GGTTACCTCT TTTAACCCCC AAGTAATTAG 301 ACTTATTAAC ATTAACCCAC TAACTTTATA ATTAAAGCAG GAATAGTCAA AAACGTCCCT 361 TAAAACAATT GAGGAATTCC GACTCAGACT GGGATTTACG CAGCCTGTGA CAGCCCGTTG 421 TGCCTGCGAC GGTCCGTCCT GCAGGTCGTC GCAAGGTTCA GAGACTGGAT TTTCACTGAA 481 GACTCTGTGA TGGTCCATCA CGCCTGTGAC GGTCCGTCTT GCCATTCCGT TACGAAGTTC 541 AGAGAGTCGA TTTTCAGTAC CCAATTTCAG ATTTCCTAAG TGTTTTGAAA TGAGACCCTG 601 CGACGGTCCG TCGTGCCCAT GATGGTCCGT CGTGGGGTCC GTCATTTCTG CCAGTTTTTC Predicted gene structure (within gDNA segment 95464 to 91768): Exon 1 93251 92710 ( 542 n); cDNA 119 660 ( 542 n); score: 0.861 MATCH C10HBa0115K16.1- SGN-E349296- 0.861 542 0.821 C PGS_C10HBa0115K16.1-_SGN-E349296- (93251 92710) Alignment (genomic DNA sequence = upper lines): TTTTTCTTCA AGCTTTGTTT CTCCCTTCTC GTTCGA--TT CTCCCTCTCT CTCTTGTTCT 93194 |||||| || | || | | ||| ||||| |||||| || ||| |||| | |||||||||| TTTTTCCTCT CG-TTCGATC CTCT-TTCTC GTTCGACTTT CTCTCTCTTT CTCTTGTTCT 176 TTCTATTTTC TTTATTCCAA CCCTATTTCT TTTACCCTAA TTAGTATATA ATTAAGAATA 93134 |||||||||| ||||||| || |||| ||||| |||||||||| |||||||||| |||||||||| TTCTATTTTC TTTATTCAAA CCCTCTTTCT TTTACCCTAA TTAGTATATA ATTAAGAATA 236 AAAGATGGCA ATAATACCCC ACTAATTAAC TTAGGGTTAC CTCTTTTAAC CCCTCAAG-A 93075 ||| |||||| |||||| ||| |||||||||| ||| |||||| |||||||||| ||| |||| | AAATATGGCA ATAATAACCC ACTAATTAAC TTAAGGTTAC CTCTTTTAAC CCC-CAAGTA 295 ATTTGAGTTA TTAATATAAA CCCACGAACT TTATAATTAA GGCAAGAATA GTCAAAAACG 93015 ||| || ||| |||| || || ||||| |||| |||||||||| ||| ||||| |||||||||| ATTAGACTTA TTAACATTAA CCCACTAACT TTATAATTAA AGCAGGAATA GTCAAAAACG 355 TCCCTTAAAA CTTAACCAGA AATCCGACTC TGCCTGGGAT TTGCACAACC TGTGACGGGC 92955 |||||||||| | || | |||||||| | ||||||| || | || || |||||| | | TCCCTTAAAA CAATTGAGGA ATTCCGACTC AGACTGGGAT TTACGCAGCC TGTGACAGCC 415 CGTCGTGCCT GCGACGGTCC GTCCTGCAGG TCGTCGTAGA GTTCAGAGAC CCAAATTTCC 92895 ||| |||||| |||||||||| |||||||||| |||||| | |||||||||| | |||| CGTTGTGCCT GCGACGGTCC GTCCTGCAGG TCGTCGCAAG GTTCAGAGAC TGGATTTTCA 475 ACCAAGGGTC TGTGACGGTC CGTCACACCT GTGACGGTCC GTCCTTCCAT TCCGTCACAA 92835 ||| || ||||| |||| | |||| ||| |||||||||| ||| | |||| ||||| || | CTGAAGACTC TGTGATGGTC CATCACGCCT GTGACGGTCC GTCTTGCCAT TCCGTTACGA 535 AGTTCAGAGA GTCGATTTTT AGTACCCAAT TTCAGATTTT CTAAGTGTTT TGAAATGAGA 92775 |||||||||| ||||||||| |||||||||| ||||||||| |||||||||| |||||||||| AGTTCAGAGA GTCGATTTTC AGTACCCAAT TTCAGATTTC CTAAGTGTTT TGAAATGAGA 595 CCCTGCGACA GTCCGTCGTG CCCATGACGG TCCGTCATGG GGTTCGTCGC TTCTGCCAGT 92715 ||||||||| |||||||||| ||||||| || |||||| ||| ||| |||| |||||||||| CCCTGCGACG GTCCGTCGTG CCCATGATGG TCCGTCGTGG GGTCCGTCAT TTCTGCCAGT 655 TTTTC 92710 ||||| TTTTC 660 hqPGS_C10HBa0115K16.1-_SGN-E349296- (93251 92710) ******************************************************************************** EST sequence 225 +strand 472 n (File: SGN-E236652+) 1 TCGATTCTCC TTCTCTCTCT TTCTGTTCTT TTCTTTTTCT TATTCAAACC CTCCTTCTTT 61 TACCCTAATT AGCATATAAT TAAGAATAAA AGATGGAATA ATAACCCACT AATTTACTCA 121 AGGTTACCTC TTTTAACCCC CAGGTAATTA GACTTATTAA CATAAACCCA CTAACTTTAT 181 AATTAAAGTA GGAATAGTCC AAAACGTCCC TTAAAACGTG TAAAGAAATC CGACCCAGAC 241 TGGGATTACG CAACCTGTGA TGGCCCGTCG TGCCTGCGAC GGTCCGTCCT GCAGGTCGTC 301 GCAAGGTTCA GAGACTCAAT TTCCACCAAA GAGTCTGTGA CGGTCCGTCA CGCCCGTGAC 361 GGTCCGTCGT GCCATTCCGT TACGAAGTTC AGAGAGTCGA TTTTTAGTAC CCAATTTCAG 421 AATTTCTAAG TGTTTTGAAA CGAGACTCCT CGACGGTCCA TCGTGCTCAT GA Predicted gene structure (within gDNA segment 94307 to 91850): Exon 1 93219 92748 ( 472 n); cDNA 1 472 ( 472 n); score: 0.852 MATCH C10HBa0115K16.1- SGN-E236652+ 0.852 472 1.000 C PGS_C10HBa0115K16.1-_SGN-E236652+ (93219 92748) Alignment (genomic DNA sequence = upper lines): TCGATTCTCC CTCTCTCTCT -TGT-TCTTT CTATTTTCTT TATTCCAACC CTATTTCTTT 93162 |||||||||| ||||||||| | | | || | |||| | ||||| |||| || |||||| TCGATTCTCC TTCTCTCTCT TTCTGTTCTT TTCTTTTTCT TATTCAAACC CTCCTTCTTT 60 TACCCTAATT AGTATATAAT TAAGAATAAA AGATGGCAAT AATACCCCAC TAATTAACTT 93102 |||||||||| || ||||||| |||||||||| |||||| ||| |||| ||||| ||||| ||| TACCCTAATT AGCATATAAT TAAGAATAAA AGATGG-AAT AATAACCCAC TAATTTACTC 119 AGGGTTACCT CTTTTAACCC CTCAAG-AAT TTGAGTTATT AATATAAACC CACGAACTTT 93043 | |||||||| |||||||||| | || | ||| | || ||||| || ||||||| ||| |||||| AAGGTTACCT CTTTTAACCC C-CAGGTAAT TAGACTTATT AACATAAACC CACTAACTTT 178 ATAATTAAGG CAAGAATAGT CAAAAACGTC CCTTAAAACT TAACCAGAAA TCCGACTCTG 92983 |||||||| | | ||||||| | |||||||| ||||||||| | ||||| |||||| | | ATAATTAAAG TAGGAATAGT CCAAAACGTC CCTTAAAACG TGTAAAGAAA TCCGACCCAG 238 CCTGGGATTT GCACAACCTG TGACGGGCCG TCGTGCCTGC GACGGTCCGT CCTGCAGGTC 92923 |||||| || | ||||||| ||| || ||| |||||||||| |||||||||| |||||||||| ACTGGGA-TT ACGCAACCTG TGATGGCCCG TCGTGCCTGC GACGGTCCGT CCTGCAGGTC 297 GTCGTAGAGT TCAGAGACCC AAATTTCCAC C-AAGGGTCT GTGACGGTCC GTCACACCTG 92864 |||| | || |||||||| | ||||||||| | ||| |||| |||||||||| ||||| || | GTCGCAAGGT TCAGAGACTC -AATTTCCAC CAAAGAGTCT GTGACGGTCC GTCACGCCCG 356 TGACGGTCCG TCCTTCCATT CCGTCACAAA GTTCAGAGAG TCGATTTTTA GTACCCAATT 92804 |||||||||| || | ||||| |||| || || |||||||||| |||||||||| |||||||||| TGACGGTCCG TCGTGCCATT CCGTTACGAA GTTCAGAGAG TCGATTTTTA GTACCCAATT 416 TCAGATTTTC TAAGTGTTTT GAAATGAGAC CCTGCGACAG TCCGTCGTGC CCATGA 92748 ||||| |||| |||||||||| |||| ||||| | |||| | ||| |||||| ||||| TCAGAATTTC TAAGTGTTTT GAAACGAGAC TCCTCGACGG TCCATCGTGC TCATGA 472 hqPGS_C10HBa0115K16.1-_SGN-E236652+ (93219 92748) ******************************************************************************** EST sequence 221 +strand 454 n (File: SGN-E396070+) 1 ATCGATTCTC CTTCTCTCTC TTTCTGTTCT TTTCTTTTTC TTATTCAAAC CCTCCTTCTT 61 TTACCCTAAT TAGCATATAA TTAAGAATAA AAGATGGAAT AATAACCCAC TAATTTACTC 121 AAGGTTACCT CTTTTAACCC CCAGGTAATT AGACTTATTA ACATAAACCC ACTAACTTTA 181 TAATTAAAGT AGGAATAGTC CAAAACGTCC CTTAAAACGT GTAAAGAAAT CCGACCCAGA 241 CTGGGATTAC GCAACCTGTG ATGGCCCGTC GTGCCTGCGA CGGTCCGTCC TGCAGGTCGT 301 CGCAAGGTTC AGAGACTCAA TTTCCACCAA AGAGTCTGTG ACGGTCCGTC ACGCCCGTGA 361 CGGTCCGTCG TGCCATTCCG TTACGAAGTT CAGAGAGTCG ATTTTTAGTA CCGGGGGGGG 421 GAGTTTCTAA TTGTTTTGAA ACTAGACTCC TCGA Predicted gene structure (within gDNA segment 94317 to 90789): Exon 1 93219 92767 ( 453 n); cDNA 2 454 ( 453 n); score: 0.830 MATCH C10HBa0115K16.1- SGN-E396070+ 0.830 453 0.998 C PGS_C10HBa0115K16.1-_SGN-E396070+ (93219 92767) Alignment (genomic DNA sequence = upper lines): TCGATTCTCC CTCTCTCTCT TGTTCTT-TC TATTTTCT-T TATTCCAACC CTATTTCTTT 93162 |||||||||| ||||||||| | | || | | ||| | | ||||| |||| || |||||| TCGATTCTCC TTCTCTCTCT TTCTGTTCTT TTCTTTTTCT TATTCAAACC CTCCTTCTTT 61 TACCCTAATT AGTATATAAT TAAGAATAAA AGATGGCAAT AATACCCCAC TAATTAACTT 93102 |||||||||| || ||||||| |||||||||| |||||| ||| |||| ||||| ||||| ||| TACCCTAATT AGCATATAAT TAAGAATAAA AGATGG-AAT AATAACCCAC TAATTTACTC 120 AGGGTTACCT CTTTTAACCC CTCAAG-AAT TTGAGTTATT AATATAAACC CACGAACTTT 93043 | |||||||| |||||||||| | || | ||| | || ||||| || ||||||| ||| |||||| AAGGTTACCT CTTTTAACCC C-CAGGTAAT TAGACTTATT AACATAAACC CACTAACTTT 179 ATAATTAAGG CAAGAATAGT CAAAAACGTC CCTTAAAACT TAACCAGAAA TCCGACTCTG 92983 |||||||| | | ||||||| | |||||||| ||||||||| | ||||| |||||| | | ATAATTAAAG TAGGAATAGT CCAAAACGTC CCTTAAAACG TGTAAAGAAA TCCGACCCAG 239 CCTGGGATTT GCACAACCTG TGACGGGCCG TCGTGCCTGC GACGGTCCGT CCTGCAGGTC 92923 |||||| || | ||||||| ||| || ||| |||||||||| |||||||||| |||||||||| ACTGGGA-TT ACGCAACCTG TGATGGCCCG TCGTGCCTGC GACGGTCCGT CCTGCAGGTC 298 GTCGTAGAGT TCAGAGACCC AAATTTCCAC C-AAGGGTCT GTGACGGTCC GTCACACCTG 92864 |||| | || |||||||| | ||||||||| | ||| |||| |||||||||| ||||| || | GTCGCAAGGT TCAGAGACTC -AATTTCCAC CAAAGAGTCT GTGACGGTCC GTCACGCCCG 357 TGACGGTCCG TCCTTCCATT CCGTCACAAA GTTCAGAGAG TCGATTTTTA GTACCCAATT 92804 |||||||||| || | ||||| |||| || || |||||||||| |||||||||| ||||| TGACGGTCCG TCGTGCCATT CCGTTACGAA GTTCAGAGAG TCGATTTTTA GTACCGGGGG 417 TCAGATTTTC TAAGTGTTTT GAAATGAGAC CCTGCGA 92767 || |||| ||| |||||| |||| |||| | ||| GGGGAGTTTC TAATTGTTTT GAAACTAGAC TCCTCGA 454 hqPGS_C10HBa0115K16.1-_SGN-E396070+ (93219 92767) ******************************************************************************** EST sequence 78 -strand 548 n (File: SGN-E356257-) 1 GTTAACTAGA AAATTAAAGT GATAGAGTCA AATAATGTAA CGACCCGTTT AGTCGTTTTG 61 AGCAGCAGAC TTTATTTCTG GAAAAACTGG CAGAAGCGAC GGACCCCACG ACGGACCGTC 121 ATGGGCACGA CGGACCATCG CAGGGTCTCG TTTCAAAACC CTCTTTCTTT TACCCCAAAT 181 TAACATATAA TTAAGAATAA AAGATGGCAA TAATACCCCA CTAATTAACT TAGGGTTACC 241 TCTTTTAACC CCAAGAATTT GAGTTATTAA TATAAACCCA CGAAATCTAT AATTAAGGAA 301 AGAATAGTCC AAAAACGTCC CTTAAAACGT GTAAGGAAAT CCGATTCTGC CTGGGATTTG 361 CGCAACCTGT GACGGGCCGT CGTGACTGTG ACGGTCCGTC CTGCAGGTCG TCGCAAGGGT 421 CAGAGAGTCA ATTTCCACTG AACAATCTAT GACGGTCCGT CACGCCTGTG ATGGTCCGTC 481 CTGTCATTCC GTCACGAAGT TCAGAGAGTC GATTTTCAGT ACCCAATTTC AGATTTTCTA 541 AGTGTTTT Predicted gene structure (within gDNA segment 95598 to 92184): Exon 1 93175 92784 ( 392 n); cDNA 157 548 ( 392 n); score: 0.886 MATCH C10HBa0115K16.1- SGN-E356257- 0.886 392 0.715 C PGS_C10HBa0115K16.1-_SGN-E356257- (93175 92784) Alignment (genomic DNA sequence = upper lines): AACCCTATTT CTTTTACCCT AA-TTAGTAT ATAATTAAGA ATAAAAGATG GCAATAATAC 93117 |||||| ||| ||||||||| || ||| || |||||||||| |||||||||| |||||||||| AACCCTCTTT CTTTTACCCC AAATTAACAT ATAATTAAGA ATAAAAGATG GCAATAATAC 216 CCCACTAATT AACTTAGGGT TACCTCTTTT AACCCCTCAA GAATTTGAGT TATTAATATA 93057 |||||||||| |||||||||| |||||||||| || ||| ||| |||||||||| |||||||||| CCCACTAATT AACTTAGGGT TACCTCTTTT AA-CCC-CAA GAATTTGAGT TATTAATATA 274 AACCCACGAA CTTTATAATT AAGGCAAGAA TAGT-CAAAA ACGTCCCTTA AAACTTAACC 92998 |||||||||| | ||||||| |||| ||||| |||| ||||| |||||||||| |||| | AACCCACGAA ATCTATAATT AAGGAAAGAA TAGTCCAAAA ACGTCCCTTA AAACGTGTAA 334 AGAAATCCGA CTCTGCCTGG GATTTGCACA ACCTGTGACG GGCCGTCGTG CCTGCGACGG 92938 ||||||||| ||||||||| ||||||| || |||||||||| |||||||||| ||| ||||| GGAAATCCGA TTCTGCCTGG GATTTGCGCA ACCTGTGACG GGCCGTCGTG ACTGTGACGG 394 TCCGTCCTGC AGGTCGTCGT AGAGTTCAGA GACCCAAATT TCCAC-CAAG GGTCTGTGAC 92879 |||||||||| ||||||||| | | ||||| || | |||| ||||| || ||| |||| TCCGTCCTGC AGGTCGTCGC AAGGGTCAGA GAGTC-AATT TCCACTGAAC AATCTATGAC 453 GGTCCGTCAC ACCTGTGACG GTCCGTCCTT CCATTCCGTC ACAAAGTTCA GAGAGTCGAT 92819 |||||||||| ||||||| | ||||||||| ||||||||| || ||||||| |||||||||| GGTCCGTCAC GCCTGTGATG GTCCGTCCTG TCATTCCGTC ACGAAGTTCA GAGAGTCGAT 513 TTTTAGTACC CAATTTCAGA TTTTCTAAGT GTTTT 92784 ||| |||||| |||||||||| |||||||||| ||||| TTTCAGTACC CAATTTCAGA TTTTCTAAGT GTTTT 548 hqPGS_C10HBa0115K16.1-_SGN-E356257- (93175 92784) ******************************************************************************** EST sequence 2 -strand 605 n (File: SGN-E347579-) 1 ATCCCCTAAT TCTACGTGTC GGTTCGTGAC ACCCGATCCC CTAATTCTAC GTGTCGGTTC 61 GTGACACCTG ATCCCCTAAT CTACGTGCCG GTTCGTGACA CCCGATCCCC TAATTCTACG 121 TGCCAGTTCG TGACACCCGA TCCCCTAATT CTACGTGTCG GTTCGTGACA CCCGATCCCC 181 TGCATGTGTC GGTACGTGAC ACTCCGATCC ACTAATATCA TTCTGTAAAT CATCAGGCCT 241 TCTCTATACC AAGGCATCAT CAATCCCATT ACTTTTATTC ATCAAGCCTT CTTCTATACC 301 AAGGCATCAT CATTAATAAG AGATTAGATT TTTATCAAGA TTTGGGATTC AATAACTTCA 361 TCATGCTTAA TATAATCACA ATTATATAAT CACGTTCATG CATGCATACA ATTAAGCATA 421 TAGCAGGGTT TACAATACTA CCAATACATA TCATTCTCTA TTAAGAGTTT ACTATGAAAG 481 CATGAAAACC ATAACCTACC TCCACCGAAG ATTAGTGATC AAGCAAGCAA ATTTTTCTCC 541 AAGCTTTGTT TCTCCCTTCT CGTTCGATTC TTCCTCTCTC TCTTGTTCTT TCTATTTTCT 601 TTATT Predicted gene structure (within gDNA segment 94423 to 92578): Exon 1 93788 93178 ( 611 n); cDNA 1 605 ( 605 n); score: 0.917 MATCH C10HBa0115K16.1- SGN-E347579- 0.917 611 1.010 C PGS_C10HBa0115K16.1-_SGN-E347579- (93788 93178) Alignment (genomic DNA sequence = upper lines): ATCCCCTAAT TCTACGTGTC GGTTCGTGAC ACCCGATCCC CTAATTCTAC GTGTCGGTTC 93729 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATCCCCTAAT TCTACGTGTC GGTTCGTGAC ACCCGATCCC CTAATTCTAC GTGTCGGTTC 60 GTGACACCCG ATCCCCTAAT TCTACGTGTC GGTTCGTGAC ACCCGATCCC CTAATTCTAC 93669 |||||||| | ||||||||| |||||||| | |||||||||| |||||||||| |||||||||| GTGACACCTG ATCCCCTAA- TCTACGTGCC GGTTCGTGAC ACCCGATCCC CTAATTCTAC 119 GTGTCGGTTC GTGACACCCG ATCCCCTAAT TCTACGTGTC GGTTCGTGAC ACCCGATCCC 93609 ||| | |||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTGCCAGTTC GTGACACCCG ATCCCCTAAT TCTACGTGTC GGTTCGTGAC ACCCGATCCC 179 CTAATTCTAC ATGTCGGTTC GTGACAC-CC GATCCCCT-A TATCATTCTG TAAATCATCA 93551 | | | | ||||||| | ||||||| || ||||| || | |||||||||| |||||||||| C---TGC-AT GTGTCGGTAC GTGACACTCC GATCCACTAA TATCATTCTG TAAATCATCA 235 GGCCTTCTCT ATACCAAGGC ATCATCAATC CCATTAATTT AATTCATAAA GCCTTCTTCT 93491 |||||||||| |||||||||| |||||||||| |||||| ||| |||||| || |||||||||| GGCCTTCTCT ATACCAAGGC ATCATCAATC CCATTACTTT TATTCATCAA GCCTTCTTCT 295 ATACCAAAGC ATCATCATTA ATAATGTATA TTAAAGTTTC CTTTCAAGAT TTGGGATTCA 93431 ||||||| || |||||||||| |||| | | | ||| | ||| | ||||||| |||||||||| ATACCAAGGC ATCATCATTA ATAA-G-AGA TTAGA-TTT- TTATCAAGAT TTGGGATTCA 351 ATATTTTCAT CATGCTT-AT CTTATCACAA TCACATAATC ATATTCACGC AAACATAAAA 93372 ||| ||||| ||||||| || | ||||||| | | |||||| | |||| || | |||| || ATAACTTCAT CATGCTTAAT ATAATCACAA TTATATAATC ACGTTCATGC ATGCATACAA 411 TTAAGCATAT AGTAGGGTTT ACAATACTAC CAATACATAT CATTCTCTAT TAAGAGTTTA 93312 |||||||||| || ||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTAAGCATAT AGCAGGGTTT ACAATACTAC CAATACATAT CATTCTCTAT TAAGAGTTTA 471 CTATGAAAGT ATGAAAACCA TAACCAACCT CCACCGAAGA TTAGTGATCA AGCAAGCAAA 93252 ||||||||| |||||||||| ||||| |||| |||||||||| |||||||||| |||||||||| CTATGAAAGC ATGAAAACCA TAACCTACCT CCACCGAAGA TTAGTGATCA AGCAAGCAAA 531 TTTTTCTTCA AGCTTTGTTT CTCCCTTCTC GTTCGATTCT CCCTCTCTCT CTTGTTCTTT 93192 ||||||| || |||||||||| |||||||||| |||||||||| ||||||||| |||||||||| TTTTTCTCCA AGCTTTGTTT CTCCCTTCTC GTTCGATTCT TCCTCTCTCT CTTGTTCTTT 591 CTATTTTCTT TATT 93178 |||||||||| |||| CTATTTTCTT TATT 605 hqPGS_C10HBa0115K16.1-_SGN-E347579- (93788 93178) ******************************************************************************** EST sequence 105 -strand 717 n (File: SGN-E349726-) 1 TTATGTTCAT TAGATTGAGT ATATAACATC TTTCAAGATT CATTGTCTTT ATTTCTCTTG 61 TGTCGGTACG TGACATTCCG CTCCNTCATA TTCATTAATC TTCTTGTGTC GGTACGTGAT 121 ACTCTGATCC CCTAAATCTA CGTGTCGGAA CGTGACACTC CGATCCCCTA AATCTACGTG 181 TCGGTTCGTG ACACCTGATC CCCTAAATCT ACGTGTCGGT TCGTGACACC CGATCCCCTA 241 AATCTACGTG TCGGTTCGTG ACACCCGATC CCCTAAATCT ACGTGTCGGT TCGTGACACC 301 CGATCCCCTA ATCTATGTGT TGGTTCGTGA CACCTGATCC CTTAATCTAC GTGTCGGTTT 361 GTGACACCCG ATCCCCTAAT TCTACGTGTC AGTTCGTGAC ACCCGATCCC CTAATCTCAT 421 TCTATCAATT CATCAAGCCT TCTCCCTTAC CAAGGCATCA TCAATCTCAT TACTTTAGTT 481 CATCAAGCCT TCTCCCTTAC CAAGGCATCA TCATTAAAAA GAGATTAGGT TTTTACAAGA 541 TTTGGGATTC AATAACTTCA TCATGCTTAT ATAATAACAA TTATATAGTT ACATTCATGC 601 AAGCATACAA TTAAGCACAT AGCAGGGTTT ACAATATTAT CAATACATAT CATTCTCTAT 661 TAAGAGTTTA CTACGAATAT CGTAAGAGAA ACAATAACCT ACCTCCACCG AAGACTA Predicted gene structure (within gDNA segment 94766 to 92269): Exon 1 93910 93269 ( 642 n); cDNA 86 717 ( 632 n); score: 0.848 MATCH C10HBa0115K16.1- SGN-E349726- 0.848 642 0.895 C PGS_C10HBa0115K16.1-_SGN-E349726- (93910 93269) Alignment (genomic DNA sequence = upper lines): TCATTATCTT TAATTCTCTT GTGTCGGTAC GTGACACTTC GATCCCTCAT ATTCATTATT 93851 |||| || | |||| |||| |||||||||| |||| ||| |||||| | | | | | | TCATATTCAT TAATCTTCTT GTGTCGGTAC GTGATACTCT GATCCC-C-T A---A--A-T 137 CCTCTTGTGT CGGTACGTGA CACTCCGATC CCCTATATCT ACGTGTCGGT TCGTGACACC 93791 || |||| ||| |||||| |||||||||| ||||| |||| |||||||||| |||||||||| -CT-ACGTGT CGGAACGTGA CACTCCGATC CCCTAAATCT ACGTGTCGGT TCGTGACACC 195 CGATCCCCTA ATTCTACGTG TCGGTTCGTG ACACCCGATC CCCTAATTCT ACGTGTCGGT 93731 ||||||||| | |||||||| |||||||||| |||||||||| |||||| ||| |||||||||| TGATCCCCTA AATCTACGTG TCGGTTCGTG ACACCCGATC CCCTAAATCT ACGTGTCGGT 255 TCGTGACACC CGATCCCCTA ATTCTACGTG TCGGTTCGTG ACACCCGATC CCCTAATTCT 93671 |||||||||| |||||||||| | |||||||| |||||||||| |||||||||| |||||| ||| TCGTGACACC CGATCCCCTA AATCTACGTG TCGGTTCGTG ACACCCGATC CCCTAA-TCT 314 ACGTGTCGGT TCGTGACACC CGATCCCCTA ATTCTACGTG TCGGTTCGTG ACACCCGATC 93611 | |||| ||| |||||||||| |||||| || | |||||||| |||||| ||| |||||||||| ATGTGTTGGT TCGTGACACC TGATCCCTTA A-TCTACGTG TCGGTTTGTG ACACCCGATC 373 CCCTAATTCT ACATGTCGGT TCGTGACACC CGATCCCCT- ATATCATTCT GT-AAATCAT 93553 |||||||||| || |||| || |||||||||| ||||||||| || ||||||| | || |||| CCCTAATTCT ACGTGTCAGT TCGTGACACC CGATCCCCTA ATCTCATTCT ATCAATTCAT 433 CAGGCCTTCT -CTATACCAA GGCATCATCA ATCCCATTAA TTTAATTCAT AAAGCCTTCT 93494 || ||||||| | |||||| |||||||||| ||| ||||| |||| ||||| ||||||||| CAAGCCTTCT CCCTTACCAA GGCATCATCA ATCTCATTAC TTTAGTTCAT CAAGCCTTCT 493 TCTATACCAA AGCATCATCA TTAATAATGT ATATTAAAGT TTCCTTTCAA GATTTGGGAT 93434 | |||||| ||||||||| |||| || | | ||| | || || || ||| |||||||||| CCCTTACCAA GGCATCATCA TTAA-AAAG- AGATT-AGGT TT--TTACAA GATTTGGGAT 548 TCAATATTTT CATCATGCTT ATCTTATCAC AATCACATAA TCATATTCAC GCAAACATAA 93374 |||||| || |||||||||| || | || || ||| | ||| | | ||||| |||| |||| TCAATAACTT CATCATGCTT ATATAATAAC AATTATATAG TTACATTCAT GCAAGCATAC 608 AATTAAGCAT ATAGTAGGGT TTACAATACT ACCAATACAT ATCATTCTCT ATTAAGAGTT 93314 ||||||||| |||| ||||| |||||||| | | |||||||| |||||||||| |||||||||| AATTAAGCAC ATAGCAGGGT TTACAATATT ATCAATACAT ATCATTCTCT ATTAAGAGTT 668 TACTATGAA- A--GTATGA- AAACCATAAC CAACCTCCAC CGAAGATTA 93269 ||||| ||| | ||| || |||| ||||| | |||||||| |||||| || TACTACGAAT ATCGTAAGAG AAACAATAAC CTACCTCCAC CGAAGACTA 717 hqPGS_C10HBa0115K16.1-_SGN-E349726- (93910 93269) ******************************************************************************** EST sequence 91 -strand 402 n (File: SGN-E357559-) 1 TGTGTTGGTT CGTGACACCT GATCCCTTAA TCTACGTGTC GGTTTGTGAC ACCCGATCCC 61 CTAATTCTAC GTGTCAGTTC GTGACACCCG ATCCCCTAAT CTCATTCTAT CAATTCATCA 121 AGCCTTCTCC CTTACCAAGG CATCATCAAT CTCATTACTT TAGTTCATCA AGCCTTCTCC 181 CTTACCAAGG CATCATCATT AAAAAGAGAT TAGGTTTTTA CAAGATTTGG GATTCAATAA 241 CTTCATCATG CTTATATAAT AACAATTATA TAGTTACATT CATGCAAGCA TACAATTAAG 301 CACATAGCAG GGTTTACAAT ATTATCAATA CATATCATTC TCTATTAAGA GTTTACTACG 361 AATATCGTAA GAGAAACAAT AACCTACCTC CACCGAAGAC TA Predicted gene structure (within gDNA segment 94757 to 92269): Exon 1 93668 93269 ( 400 n); cDNA 2 402 ( 401 n); score: 0.826 MATCH C10HBa0115K16.1- SGN-E357559- 0.826 400 0.995 C PGS_C10HBa0115K16.1-_SGN-E357559- (93668 93269) Alignment (genomic DNA sequence = upper lines): GTGTCGGTTC GTGACACCCG ATCCCCTAAT TCTACGTGTC GGTTCGTGAC ACCCGATCCC 93609 |||| ||||| |||||||| | ||||| ||| |||||||||| |||| ||||| |||||||||| GTGTTGGTTC GTGACACCTG ATCCCTTAA- TCTACGTGTC GGTTTGTGAC ACCCGATCCC 60 CTAATTCTAC ATGTCGGTTC GTGACACCCG ATCCCCT-AT ATCATTCTGT -AAATCATCA 93551 |||||||||| |||| |||| |||||||||| ||||||| || ||||||| | || |||||| CTAATTCTAC GTGTCAGTTC GTGACACCCG ATCCCCTAAT CTCATTCTAT CAATTCATCA 120 GGCCTTCT-C TATACCAAGG CATCATCAAT CCCATTAATT TAATTCATAA AGCCTTCTTC 93492 ||||||| | |||||||| |||||||||| | ||||| || || ||||| | |||||||| | AGCCTTCTCC CTTACCAAGG CATCATCAAT CTCATTACTT TAGTTCATCA AGCCTTCTCC 180 TATACCAAAG CATCATCATT AATAATGTAT ATTAAAGTTT CCTTTCAAGA TTTGGGATTC 93432 |||||| | |||||||||| || || | | ||| | |||| || ||||| |||||||||| CTTACCAAGG CATCATCATT AA-AAAG-AG ATT-AGGTTT --TTACAAGA TTTGGGATTC 235 AATATTTTCA TCATGCTTAT CTTATCACAA TCACATAATC ATATTCACGC AAACATAAAA 93372 |||| |||| |||||||||| | || |||| | | ||| | | ||||| || || |||| || AATAACTTCA TCATGCTTAT ATAATAACAA TTATATAGTT ACATTCATGC AAGCATACAA 295 TTAAGCATAT AGTAGGGTTT ACAATACTAC CAATACATAT CATTCTCTAT TAAGAGTTTA 93312 ||||||| || || ||||||| |||||| || |||||||||| |||||||||| |||||||||| TTAAGCACAT AGCAGGGTTT ACAATATTAT CAATACATAT CATTCTCTAT TAAGAGTTTA 355 CTATGAA-A- -GTATGA-AA ACCATAACCA ACCTCCACCG AAGATTA 93269 ||| ||| | ||| || || || |||||| |||||||||| |||| || CTACGAATAT CGTAAGAGAA ACAATAACCT ACCTCCACCG AAGACTA 402 hqPGS_C10HBa0115K16.1-_SGN-E357559- (93668 93269) ******************************************************************************** EST sequence 4 -strand 774 n (File: SGN-E349977-) 1 AGTAGATATC ATCGCTAACT CAAAATAGGG AACAATATAT ATCAATAATA ATGTAAATCA 61 ACTACAATAC TCATCATGTA GCAATAGCAA TTTCTTNATC ATTAACAATT ACCGTCAAGT 121 TCACACATGA GGACTCAAGC CTCAATACCA TACTCATTTG GGAATTAAGT TCATTAGATT 181 GAGTATATTC ATTATCTTTC AAGATTCATT ATCTTTCTTC CTCTTGTGTC GGTACGTGAC 241 ACTCCGCTCC TCTATTTCTA TCCTGGTGCC GGAACGTGGC ACTCCGATCC TCATATTCAT 301 TCTATCCTGG TACCGGAACG TGGCACCCGA TCCTCATATT CTATCCTGGT GTCGGAACGT 361 AACACTCCGA TCCTCATATT CATTCTATCC TGGTACCGGA ACGTGGCACC CGATCCTCAT 421 ATTCTATCCT GGTGTCGGAA CGTGACACTC CGATCCTCAT ATTCTATCCT GGTGTCGGAA 481 CGTGACACTC CGATCCTCAT ATTCATTCTA TCCTGGTACC GAAACGTGGC ACCCGATCCC 541 CTAATTCATC AAGCCTTCTT CTACACTAAG GCATCATCAT TCTCATTATA TAATTTATCA 601 AGCCTTCTCT CATACTAAGG CCTCATCAAT CTTATTATAT AATATATCAA GTGAATTAGG 661 GTTCTTTCAA GATTTGGGAT TCAATAGCTT CATCATGCTT TGTTAATTCA TAACAATTTC 721 ATAATCATAA TCATGCAAGC ATACCAATAA GCATATAGAC AGGTTTACAA CATC Predicted gene structure (within gDNA segment 96038 to 87720): Exon 1 94116 93501 ( 616 n); cDNA 1 650 ( 650 n); score: 0.644 Intron 1 93500 93466 ( 35 n); Pd: 0.000 (s: 0.77), Pa: 0.000 (s: 0.84) Exon 2 93465 93348 ( 118 n); cDNA 651 770 ( 120 n); score: 0.729 MATCH C10HBa0115K16.1- SGN-E349977- 0.657 734 0.948 C PGS_C10HBa0115K16.1-_SGN-E349977- (94116 93501,93465 93348) Alignment (genomic DNA sequence = upper lines): AGTAGATATC ATCGGCCAAC TCAAAATAGG GGACAGTATA TATCAATATT ATCGTAAATC 94057 |||||||||| ||| || ||| |||||||||| | ||| |||| |||||||| | | ||||||| AGTAGATATC ATC-GCTAAC TCAAAATAGG GAACAATATA TATCAATAAT AATGTAAATC 59 AACTATAAAA CTCAACATGT AGCCACAACA AGTATTATAA TCATCAATAA GTACCATCAA 93997 ||||| || | |||| ||||| ||| | | || | | | | | |||| || || |||| |||| AACTACAATA CTCATCATGT AGCAATAGCA A-TTTCTTNA TCATTAACAA TTACCGTCAA 118 GTTCATCCAT GAGGGCTCAA GCCTTAACAC CATACTCATT TGGGAATTAT GTTCGTTAGA 93937 ||||| ||| |||| ||||| |||| || || |||||||||| ||||||||| |||| ||||| GTTCACACAT GAGGACTCAA GCCTCAATAC CATACTCATT TGGGAATTAA GTTCATTAGA 178 TTGAGTATAT T-AACATCTT TCAAGATTCA TTATCTTTAA TTCTCTTGTG TCGGTACGTG 93878 |||||||||| | | ||||| |||||||||| |||||||| | |||||||| |||||||||| TTGAGTATAT TCATTATCTT TCAAGATTCA TTATCTTTCT TCCTCTTGTG TCGGTACGTG 238 ACACTTCGAT CCCTCATATT CATTATTCCT CTTGTGTCGG TACGTGACAC TCCGATCC-C 93819 ||||| || | |||| |||| || | | || ||| ||| ||||| ||| |||||||| | ACACTCCGCT -CCTC-TATT -TCTA-T-C- CTGGTGCCGG AACGTGGCAC TCCGATCCTC 292 CTA-T-A-TC TA-CGT-GT- -CGGTTCGTG ACACCCGATC CCCTAATTCT A--C--GTGT 93770 || | | || || | | || ||| |||| ||||||||| | | ||||| | | |||| ATATTCATTC TATCCTGGTA CCGGAACGTG GCACCCGATC CTCATATTCT ATCCTGGTGT 352 CGGTTCGTGA CAC-CCGATC C-CCTA---A TTCTA-CGT- GT--CGGTTC GTGACACCCG 93719 ||| ||| | ||| |||||| | | || | ||||| | | || ||| | ||| |||||| CGGAACGTAA CACTCCGATC CTCATATTCA TTCTATCCTG GTACCGGAAC GTGGCACCCG 412 ATCCCCTAAT TCTA--C--G TGTCGGTTCG TGACAC-CCG ATCCCCTAAT TCTA--C--G 93668 |||| | || |||| | | |||||| || |||||| ||| |||| | || |||| | | ATCCTCATAT TCTATCCTGG TGTCGGAACG TGACACTCCG ATCCTCATAT TCTATCCTGG 472 TGTCGGTTCG TGACAC-CCG ATCC-CCTA- --ATTCTA-C GT-GT--CGG TTCGTGACAC 93617 |||||| || |||||| ||| |||| | || |||||| | | || || |||| ||| TGTCGGAACG TGACACTCCG ATCCTCATAT TCATTCTATC CTGGTACCGA AACGTGGCAC 532 CCGATCCCCT AATTCTACAT GTC-GGTTCG TGAC-ACCCG ATCCCCTATA TCATTCTGTA 93559 |||||||||| ||||| || | | ||| || | ||| | | ||||| | || CCGATCCCCT AATTCATCAA GCCTTCTTCT ACACTAAGGC ATCATCATTC TCATTATATA 592 AATCATCAGG CCTTCTCT-A TACCAAGGCA TCATCAATCC CATTAATTTA ATTCATAAAG 93500 | | |||| | |||||||| | ||| ||||| ||||||||| ||| || || || || || ATTTATCAAG CCTTCTCTCA TACTAAGGCC TCATCAATCT TATT-ATATA ATATATCAA. 650 CCTTCTTCTA TACCAAAGCA TCATCATTAA TAATGTATAT TAAAGTTTCC TTTCAAGATT 93440 || || | | | || | |||||||||| .......... .......... .......... ....GTGAAT T-AGGGTT-C TTTCAAGATT 674 TGGGATTCAA TATTTTCATC ATGC-TT-AT -CTT-ATCAC AATCACATAA TCATATTCAC 93384 |||||||||| || |||||| |||| || | || || || ||| ||||| ||||| ||| TGGGATTCAA TAGCTTCATC ATGCTTTGTT AATTCATAAC AATTTCATAA TCATAATCAT 734 GCAAACATAA AATTAAGCAT ATAGTAGGGT TTACAA 93348 |||| |||| | ||||||| |||| ||| |||||| GCAAGCATAC CAATAAGCAT ATAGACAGGT TTACAA 770 hqPGS_C10HBa0115K16.1-_SGN-E349977- (93465 93348) ******************************************************************************** EST sequence 250 +strand 337 n (File: SGN-E357033+) 1 ACTGAATAGA TATCATCGCC CAACTCAAAA TAGAAATCAA TATATATCAA GNATTATCAT 61 AAAATCAACT ATGATACTCA ACATGTAGCA ACAACAAGCA CTATATCATT AACAATTACC 121 GTCACGTTCA CACATGAGGA CTCAAGCCTC AATACCATAC TCATTTGGGA ATCATGTTCA 181 TTAGATTTAG TATATTAACA TCTTTCAAGA TTCATTATCT TTATTTCTCT TGTGACGGAA 241 CATGACATTC CGCTCCCTCA TATTCATTAA TCCTCTTGTG TGAACACATG ACACTCCGAT 301 CCCCTAAATC TACATGACAG TTTCATGAAC GCTATCC Predicted gene structure (within gDNA segment 96098 to 92149): Exon 1 94120 93785 ( 336 n); cDNA 1 337 ( 337 n); score: 0.829 MATCH C10HBa0115K16.1- SGN-E357033+ 0.829 336 0.997 C PGS_C10HBa0115K16.1-_SGN-E357033+ (94120 93785) Alignment (genomic DNA sequence = upper lines): ACTCAGTAGA TATCATCGGC CAACTCAAAA TAGGGGACAG TATATATCAA -TATTATCGT 94062 ||| | |||| |||||||| | |||||||||| ||| || |||||||||| |||||| | ACTGAATAGA TATCATCGCC CAACTCAAAA TAGAAATCAA TATATATCAA GNATTATCAT 60 -AAATCAACT ATAAAACTCA ACATGTAGCC ACAACAAGTA TTATAATCAT CAATAAGTAC 94003 ||||||||| || | ||||| ||||||||| |||||||| | ||| ||||| || || ||| AAAATCAACT ATGATACTCA ACATGTAGCA ACAACAAGCA CTAT-ATCAT TAACAATTAC 119 CATCAAGTTC ATCCATGAGG GCTCAAGCCT TAACACCATA CTCATTTGGG AATTATGTTC 93943 | ||| |||| | ||||||| ||||||||| || |||||| |||||||||| ||| |||||| CGTCACGTTC ACACATGAGG ACTCAAGCCT CAATACCATA CTCATTTGGG AATCATGTTC 179 GTTAGATTGA GTATATTAAC ATCTTTCAAG ATTCATTATC TTTAATTCTC TTGTGTCGGT 93883 ||||||| | |||||||||| |||||||||| |||||||||| |||| ||||| ||||| ||| ATTAGATTTA GTATATTAAC ATCTTTCAAG ATTCATTATC TTTATTTCTC TTGTGACGGA 239 ACGTGACACT TCGATCCCTC ATATTCATTA TTCCTCTTGT GTCGGTACGT GACACTCCGA 93823 || ||||| | || |||||| |||||||||| ||||||||| || || | |||||||||| ACATGACATT CCGCTCCCTC ATATTCATTA ATCCTCTTGT GTGAACACAT GACACTCCGA 299 TCCCCTATAT CTACGTGTC- GGTTCGTGAC ACCCGATCC 93785 ||||||| || |||| || | | ||| ||| || | |||| TCCCCTAAAT CTACATGACA GTTTCATGA- ACGCTATCC 337 hqPGS_C10HBa0115K16.1-_SGN-E357033+ (94120 93785) ******************************************************************************** EST sequence 93 -strand 239 n (File: SGN-E391780-) 1 ATCAACAAAT ACTATATCAT TAACAATTAC CGTCAAGTTC ACACATGAGG ACTCAAGCCT 61 CAATACCATA CTCATTTGGG AATCATGTTC ATTAGATTGA GTATATTAAC ATCTTTCAAG 121 ATTCATTATC TTTATTTCTC TTGTGTCGGT ACGTGACACT CCGCTCCCTC AATATTCATT 181 AATCCTCTTG TGTCGGTACG TGACACTCCG ATCCCCTAAA TCTATATGTC GGTTTGTGA Predicted gene structure (within gDNA segment 95218 to 92483): Exon 1 94031 93795 ( 237 n); cDNA 3 239 ( 237 n); score: 0.897 MATCH C10HBa0115K16.1- SGN-E391780- 0.897 237 0.992 C PGS_C10HBa0115K16.1-_SGN-E391780- (94031 93795) Alignment (genomic DNA sequence = upper lines): CAACAAGTAT TATAATCATC AATAAGTACC ATCAAGTTCA TCCATGAGGG CTCAAGCCTT 93972 |||||| || ||| ||||| || || |||| ||||||||| ||||||| ||||||||| CAACAAATAC TAT-ATCATT AACAATTACC GTCAAGTTCA CACATGAGGA CTCAAGCCTC 61 AACACCATAC TCATTTGGGA ATTATGTTCG TTAGATTGAG TATATTAACA TCTTTCAAGA 93912 || ||||||| |||||||||| || |||||| |||||||||| |||||||||| |||||||||| AATACCATAC TCATTTGGGA ATCATGTTCA TTAGATTGAG TATATTAACA TCTTTCAAGA 121 TTCATTATCT TTAATTCTCT TGTGTCGGTA CGTGACACTT CGATCCCTC- ATATTCATTA 93853 |||||||||| ||| |||||| |||||||||| ||||||||| || |||||| |||||||||| TTCATTATCT TTATTTCTCT TGTGTCGGTA CGTGACACTC CGCTCCCTCA ATATTCATTA 181 TTCCTCTTGT GTCGGTACGT GACACTCCGA TCCCCTATAT CTACGTGTCG GTTCGTGA 93795 ||||||||| |||||||||| |||||||||| ||||||| || ||| ||||| ||| |||| ATCCTCTTGT GTCGGTACGT GACACTCCGA TCCCCTAAAT CTATATGTCG GTTTGTGA 239 hqPGS_C10HBa0115K16.1-_SGN-E391780- (94031 93795) ******************************************************************************** EST sequence 73 -strand 481 n (File: SGN-E246710-) 1 AGTCCAAGCT AGAAGCATTA GCTCACCCTG AATTTCCGAT GTAGTAAGAC TGGCTTGAAT 61 TACTGTTGAG TTGAACACGA TGGCACGTTT GCTGCACTCC ACAAATAAAC AAGAAGAGAA 121 CATAAAAGTA GGGGTCAGTA CAAAACACGG GTACTGAGTA GATATCATCG GCCAACTCAA 181 AATAGAAATC AATATATATA CCAAGTAATA TCATAAAATC AACTATGATA CTCAACATGT 241 AGCAACAACA AATACTATAT CATTAACAAT TACCGTCAAG TTCACACATG AGGACTCAAG 301 CCTCAATACC ATACTCATTT GGGAATCATG TTCATTAGAT TGAGTATATT AACATCTTTC 361 AAGATTCATT ATCTTTATTT CTCTTGTGTC GGTACGTGAC ACTCCGCTCC CTCAATATTC 421 ATTAATCCTC TTGTGTCGGT ACGTGACACT CCGATCCCCT AAATCTATAT GTCGGTTTGT 481 G Predicted gene structure (within gDNA segment 94882 to 92493): Exon 1 94272 93796 ( 477 n); cDNA 1 481 ( 481 n); score: 0.896 MATCH C10HBa0115K16.1- SGN-E246710- 0.896 477 0.992 C PGS_C10HBa0115K16.1-_SGN-E246710- (94272 93796) Alignment (genomic DNA sequence = upper lines): AGTCCAAGCT AGAAGCATTA GCTCACCCTG AATTTCCGAT GTGGTAAGAC TGGCTTGAAT 94213 |||||||||| |||||||||| |||||||||| |||||||||| || ||||||| |||||||||| AGTCCAAGCT AGAAGCATTA GCTCACCCTG AATTTCCGAT GTAGTAAGAC TGGCTTGAAT 60 TACTGTTGAG TTGAAGACGA TGGCACGTTT GCTGCACTCC ACAAATAAAC AAGAAGAAAA 94153 |||||||||| ||||| |||| |||||||||| |||||||||| |||||||||| ||||||| || TACTGTTGAG TTGAACACGA TGGCACGTTT GCTGCACTCC ACAAATAAAC AAGAAGAGAA 120 CATAAAAGTA GGGGTTAGTA CAAAACACGG GTACTCAGTA GATATCATCG GCCAACTCAA 94093 |||||||||| ||||| |||| |||||||||| ||||| |||| |||||||||| |||||||||| CATAAAAGTA GGGGTCAGTA CAAAACACGG GTACTGAGTA GATATCATCG GCCAACTCAA 180 AATAGGGGAC AGTATATAT- -CAA-TATTA TCGT-AAATC AACTATAAAA CTCAACATGT 94037 ||||| | | ||||||| ||| || || || | ||||| |||||| | | |||||||||| AATAGAAATC AATATATATA CCAAGTAATA TCATAAAATC AACTATGATA CTCAACATGT 240 AGCCACAACA AGTATTATAA TCATCAATAA GTACCATCAA GTTCATCCAT GAGGGCTCAA 93977 ||| |||||| | || ||| | |||| || || |||| |||| ||||| ||| |||| ||||| AGCAACAACA AATACTAT-A TCATTAACAA TTACCGTCAA GTTCACACAT GAGGACTCAA 299 GCCTTAACAC CATACTCATT TGGGAATTAT GTTCGTTAGA TTGAGTATAT TAACATCTTT 93917 |||| || || |||||||||| ||||||| || |||| ||||| |||||||||| |||||||||| GCCTCAATAC CATACTCATT TGGGAATCAT GTTCATTAGA TTGAGTATAT TAACATCTTT 359 CAAGATTCAT TATCTTTAAT TCTCTTGTGT CGGTACGTGA CACTTCGATC CCTC-ATATT 93858 |||||||||| |||||||| | |||||||||| |||||||||| |||| || || |||| ||||| CAAGATTCAT TATCTTTATT TCTCTTGTGT CGGTACGTGA CACTCCGCTC CCTCAATATT 419 CATTATTCCT CTTGTGTCGG TACGTGACAC TCCGATCCCC TATATCTACG TGTCGGTTCG 93798 ||||| |||| |||||||||| |||||||||| |||||||||| || ||||| |||||||| | CATTAATCCT CTTGTGTCGG TACGTGACAC TCCGATCCCC TAAATCTATA TGTCGGTTTG 479 TG 93796 || TG 481 hqPGS_C10HBa0115K16.1-_SGN-E246710- (94272 93796) ******************************************************************************** EST sequence 265 +strand 730 n (File: SGN-E546506+) 1 TTTTTTTTTT TTTTTTTTAA TAAAAACAAT TCAATACTAT TATTATTATC CCCAAAATCT 61 GGAAGTCATC ATCACAAGAA CATCTATCTC AAATTACTTA ACTAGGAATG TCTAAGAACA 121 AAATAACTAA AAAGCTAGTC CATGCCGGAA ATTCAAGGCA TCAAGACTTG AAGAAGAAGA 181 CCCAGTCCAA GCTAGACGCA TTAGCTCACC CTGAATTTTC CGATGAAGTG AAGACTGGCT 241 AGATCTACTG TTGAGTTGAA GTTGACGGAA CGTTTGCTGC ATTACACAAA TAACAAAGAG 301 GAAAACATGA AAGTAGGGGT CAGTACAACC ACACGTACTG AGTAGATATC ATCGGCCAAC 361 TCAAAATAGG GAACAGTATA TATCAATAAT AATGTAAATC AACTACAATA CTCAACATGT 421 AGCAATAACA CCATGAATTC ATCAATAACT ACAACCGAGT TCACACATGA GGACTCAAGC 481 CTCAATACCA TACTCATTTG GGAATTAAGT TCATTAGATT GAGTATATTC ATTATCTTTC 541 AAGATTCATT ATCTTTCTTC CTCTTGTGTC GGTACGTGAC ACTCCGATCC TCTATTTCTA 601 TCCTGGTGCC GGAACGTGGC ACTCCGATCC TCATTCTATC CTGGTACCGG AACGTGGCAC 661 CCGATCCATT TTCTATCCTG GTGTCGGAAC GTGACACTCC GATCCTCATA TTCTATCCTG 721 GTACCGGAAC Predicted gene structure (within gDNA segment 98116 to 91810): Exon 1 94416 93820 ( 597 n); cDNA 44 630 ( 587 n); score: 0.840 PPA cDNA 18 1 MATCH C10HBa0115K16.1- SGN-E546506+ 0.840 597 0.818 C PGS_C10HBa0115K16.1-_SGN-E546506+ (94416 93820) Alignment (genomic DNA sequence = upper lines): TATTATTCCC AAAACCTGGA AGTCATCATC ACAAGAACAT CTACGATCAA ATGACTAAAC 94357 |||||| ||| |||| ||||| |||||||||| |||||||||| ||| |||| || ||| ||| TATTATCCCC AAAATCTGGA AGTCATCATC ACAAGAACAT CTA-TCTCAA ATTACTTAAC 102 TAAGAGTATT CTAAAAGCTA AAAATACATC AGAAGCTAGT CCATGCCAGA AGTTCAAGGC 94297 || || | | |||| | | |||||| | | |||||||| ||||||| || | |||||||| TAGGAAT-GT CTAAGAAC-- AAAATAACTA AAAAGCTAGT CCATGCCGGA AATTCAAGGC 159 ATCAAGACTT GAAGAAGGAG ATCCAGTCCA AGCTAGAAGC ATTAGCTCAC CCTGAA-TTT 94238 |||||||||| ||||||| || | |||||||| ||||||| || |||||||||| |||||| ||| ATCAAGACTT GAAGAAGAAG ACCCAGTCCA AGCTAGACGC ATTAGCTCAC CCTGAATTTT 219 CCGATGTGGT -AAGACTGGC TTGAATTACT GTTGAGTTGA AGACGATGGC ACGTTTGCTG 94179 |||||| || ||||||||| | || |||| |||||||||| || || || |||||||||| CCGATGAAGT GAAGACTGGC TAGATCTACT GTTGAGTTGA AGTTGACGGA ACGTTTGCTG 279 CACTCCACAA ATAAACAAGA AGAAAACATA AAAGTAGGGG TTAGTACAAA ACACGGGTAC 94119 || | ||||| |||| |||| |||||||| |||||||||| | ||||| || ||| |||| CATTACACAA ATAACAAAGA GGAAAACATG AAAGTAGGGG TCAGTAC-AA CCACACGTAC 338 TCAGTAGATA TCATCGGCCA ACTCAAAATA GGGGACAGTA TATATCAATA TTATCGTAAA 94059 | |||||||| |||||||||| |||||||||| ||| |||||| |||||||||| || ||||| TGAGTAGATA TCATCGGCCA ACTCAAAATA GGGAACAGTA TATATCAATA ATAATGTAAA 398 TCAACTATAA AACTCAACAT GTAGCCACAA CAAGTATTAT AATCATCAAT AAGTACCATC 93999 ||||||| || ||||||||| ||||| | || | | || | | |||||||| || ||| | | TCAACTACAA TACTCAACAT GTAGCAATAA C-ACCATGA- ATTCATCAAT AACTACAACC 456 AAGTTCATCC ATGAGGGCTC AAGCCTTAAC ACCATACTCA TTTGGGAATT ATGTTCGTTA 93939 |||||| | |||||| ||| |||||| || |||||||||| |||||||||| | |||| ||| GAGTTCACAC ATGAGGACTC AAGCCTCAAT ACCATACTCA TTTGGGAATT AAGTTCATTA 516 GATTGAGTAT ATT-AACATC TTTCAAGATT CATTATCTTT AATTCTCTTG TGTCGGTACG 93880 |||||||||| ||| | ||| |||||||||| |||||||||| | |||||| |||||||||| GATTGAGTAT ATTCATTATC TTTCAAGATT CATTATCTTT CTTCCTCTTG TGTCGGTACG 576 TGACACTTCG ATCCCTCATA TTCATTATTC CTCTTGTGTC GGTACGTGAC ACTCCGATCC 93820 ||||||| || || |||| || || || | | || ||| | || ||||| | |||||||||| TGACACTCCG AT-CCTC-TA TT-TCTA-T- C-CTGGTGCC GGAACGTGGC ACTCCGATCC 630 hqPGS_C10HBa0115K16.1-_SGN-E546506+ (94416 93820) ******************************************************************************** EST sequence 48 -strand 729 n (File: SGN-E351546-) 1 AGTCGTTGCT CTAGTTCTAC CCATCTGGCA AGAGAGTGAG NATGGTCAGA TACCAATTCG 61 TATCGCTTAG ATACCAATTG ACTCGAAGTA GTAGCACGAA AGAAAGAATG AAAGAGTGAA 121 GTTTTCCTAA AGTCTTATAG CCTCTCAAGG AAAAGTAAAA GCGTCCCCCT ACCGTTCCTT 181 AAGACTCTAC TAGACTTGTT CTTGTGTGAT GAGACCAACG AACCTAATGC TCTGATACCA 241 AGTTTTGTCA CGACCCAAAT CCGGGCCGCC ACTGGCACCC ACACTTACCC TCCTATGTGA 301 GCGAACCAAC CAATCTAAAC CTTAACATTT CAATGTAATA GCAACAGAAA GTAATGCGGA 361 AGACTTAAAC TCATTAATAA AATCAATAAC TACTATTATT AAACATCTAT TATTCCCAAA 421 ACCTGGAAGT CATCATCACA AGAACATCTA CTTTAAACTA CTAATTCTAA GAGTTTCTAA 481 GAAGCTAAAA AATTACATAA GAAGCTAGTC CATGCCGGAA GTTCAAGGCA TCAAGACATG 541 AAGGAGAAGA TCCAGTCCAA GCTAGAAGCG TTAGCTCACC CTGAAGATCC GGTGTGACGA 601 AGACTGGCTT GAGTTACTGT TGAGTCGAAG ATGACGGCAC GTTTGCTGCA CTCCACAAAT 661 ACCAAGAAGA AAAACATAAA AGTAGGGGTC AGTACAAAAC ACGGCTACTG AGTAGATATC 721 ATCGGCCAA Predicted gene structure (within gDNA segment 96319 to 93138): Exon 1 94828 94098 ( 731 n); cDNA 1 729 ( 729 n); score: 0.885 MATCH C10HBa0115K16.1- SGN-E351546- 0.885 731 1.003 C PGS_C10HBa0115K16.1-_SGN-E351546- (94828 94098) Alignment (genomic DNA sequence = upper lines): AGTCGTTGCT CTAGTTCTAA CCATCTGCGA AAGAGAGTGA AGATGGTCAG ATACCAATTC 94769 |||||||||| ||||||||| ||||||| | |||||||||| |||||||| |||||||||| AGTCGTTGCT CTAGTTCTAC CCATCTG-GC AAGAGAGTGA GNATGGTCAG ATACCAATTC 59 GTATCGCCTA GATACCAATT GGACTC-AAG TAGTAGCATA AAAGAAAGAA TGAAAGAGTG 94710 ||||||| || |||||||||| ||||| ||| |||||||| |||||||||| |||||||||| GTATCGCTTA GATACCAATT -GACTCGAAG TAGTAGCACG AAAGAAAGAA TGAAAGAGTG 118 AAATTTTTCC GAAAGTCTTA TAGCCTCTCA AGGAAAAGTA AAGGCGTCCC CCTACCGTTC 94650 || |||||| ||||||||| |||||||||| |||||||||| || ||||||| |||||||||| -AAGTTTTCC TAAAGTCTTA TAGCCTCTCA AGGAAAAGTA AAAGCGTCCC CCTACCGTTC 177 CTTAAGACTC TACTAGACCT GTTCTTGTGT GATGAGACCA ACGAACCTAA GGCTCTGATA 94590 |||||||||| |||||||| | |||||||||| |||||||||| |||||||||| ||||||||| CTTAAGACTC TACTAGACTT GTTCTTGTGT GATGAGACCA ACGAACCTAA TGCTCTGATA 237 CCAAG-TTTG TCACGACCCA AA-CCGGGTT GCGACTGGCA CCCACACTTA CCCTCCTATG 94532 ||||| |||| |||||||||| || ||||| || ||||||| |||||||||| |||||||||| CCAAGTTTTG TCACGACCCA AATCCGGGCC GCCACTGGCA CCCACACTTA CCCTCCTATG 297 TGAGCGAACC AACCGATCTA AACCTTAACA TTTCTATGTA ATAACAACAG AAAGTAATGC 94472 |||||||||| |||| ||||| |||||||||| |||| ||||| ||| |||||| |||||||||| TGAGCGAACC AACCAATCTA AACCTTAACA TTTCAATGTA ATAGCAACAG AAAGTAATGC 357 GGAACACTT- AACTCATTAA TAAAAACCAA TTCAATAACT ATCAATATTC AACATCTATT 94413 |||| |||| |||||||||| | || || ||||||||| | | |||| |||||||||| GGAAGACTTA AACTCATTAA T---AA--AA -TCAATAACT ACTATTATTA AACATCTATT 411 ATTCCCAAAA CCTGGAAGTC ATCATCACAA GAACATCTAC GATCAAATGA CTAA-ACTAA 94354 |||||||||| |||||||||| |||||||||| |||||||||| | ||| | |||| |||| ATTCCCAAAA CCTGGAAGTC ATCATCACAA GAACATCTAC -TTTAAACTA CTAATTCTAA 470 GAGTATTCTA A-AAGCT-AA AAA-TACATC AGAAGCTAGT CCATGCCAGA AGTTCAAGGC 94297 |||| ||||| | ||||| || ||| ||||| |||||||||| ||||||| || |||||||||| GAGT-TTCTA AGAAGCTAAA AAATTACATA AGAAGCTAGT CCATGCCGGA AGTTCAAGGC 529 ATCAAGACTT GAAGAAGGAG ATCCAGTCCA AGCTAGAAGC ATTAGCTCAC CCTGAATTTC 94237 |||||||| | |||| || || |||||||||| |||||||||| ||||||||| |||||| || ATCAAGACAT GAAGGAGAAG ATCCAGTCCA AGCTAGAAGC GTTAGCTCAC CCTGAAGATC 589 CGATGTG-GT AAGACTGGCT TGAATTACTG TTGAGTTGAA GACGATGGCA CGTTTGCTGC 94178 || |||| |||||||||| ||| |||||| |||||| ||| || || |||| |||||||||| CGGTGTGACG AAGACTGGCT TGAGTTACTG TTGAGTCGAA GATGACGGCA CGTTTGCTGC 649 ACTCCACAAA TAAACAAGAA G-AAAACATA AAAGTAGGGG TTAGTACAAA ACACGGGTAC 94119 |||||||||| | | |||||| | |||||||| |||||||||| | |||||||| |||||| ||| ACTCCACAAA T-ACCAAGAA GAAAAACATA AAAGTAGGGG TCAGTACAAA ACACGGCTAC 708 TCAGTAGATA TCATCGGCCA A 94098 | |||||||| |||||||||| | TGAGTAGATA TCATCGGCCA A 729 hqPGS_C10HBa0115K16.1-_SGN-E351546- (94828 94098) ******************************************************************************** EST sequence 84 -strand 655 n (File: SGN-E356696-) 1 CAATTGGACT CAAGTAGTAG CACGAAAGAA AGAATGAAAG AGTGAAGTTT TCCTAAAGTC 61 TTATAGCCTC TCAAGGAAAA GTAAAAGCGT CCCCCTACCG TTCCTTAAGA CTCTACTAGA 121 CTTGTTCTTG TGTGATGAGA CCAACGAACC TAATGCTCTG ATACCAAGTT TTGTCACGAC 181 CCAAATCCGG GCCGCCACTG GCACCCACAC TTACCCTCNT ATGTGAGCGA ACCAACCAAT 241 CTAAACCTTA ACATTTCAAT GTAATAGCAA CAGAAAGTAA TGCGGAAGAC TTAAACTCAT 301 TAATAAAATC AATAACTACT ATTATTAAAC ATCTATTATT CCCAAAACCT GGAAGTCATC 361 ATCACAAGAA CATCTACTTT AAACTACTAA TTCTAAGAGT TTCTAAGAAG CTAAAAAATT 421 ACATAAGAAG CTAGTCCATG CCGGAAGTTC AAGGCATCAA GACATGAAGG AGAAGATCCA 481 GTCCAAGCTA GAAGCGTTAG CTCACCCTGA AGATCCGGTG TGACGAAGAC TGGCTTGAGT 541 TACTGTTGAG TCGAAGATGA CGGCACGTTT GCTGCACTCC ACAAATAACA AGAAGAAAAA 601 CATAAAAGTA GGGGTCAGTA CAAAACACGG CTACTGAGTA GATATCATCG GCCAA Predicted gene structure (within gDNA segment 95363 to 93138): Exon 1 94753 94098 ( 656 n); cDNA 1 655 ( 655 n); score: 0.886 MATCH C10HBa0115K16.1- SGN-E356696- 0.886 656 1.002 C PGS_C10HBa0115K16.1-_SGN-E356696- (94753 94098) Alignment (genomic DNA sequence = upper lines): CAATTGGACT CAAGTAGTAG CATAAAAGAA AGAATGAAAG AGTGAAATTT TTCCGAAAGT 94694 |||||||||| |||||||||| || |||||| |||||||||| |||| || || |||| ||||| CAATTGGACT CAAGTAGTAG CACGAAAGAA AGAATGAAAG AGTG-AAGTT TTCCTAAAGT 59 CTTATAGCCT CTCAAGGAAA AGTAAAGGCG TCCCCCTACC GTTCCTTAAG ACTCTACTAG 94634 |||||||||| |||||||||| |||||| ||| |||||||||| |||||||||| |||||||||| CTTATAGCCT CTCAAGGAAA AGTAAAAGCG TCCCCCTACC GTTCCTTAAG ACTCTACTAG 119 ACCTGTTCTT GTGTGATGAG ACCAACGAAC CTAAGGCTCT GATACCAAG- TTTGTCACGA 94575 || ||||||| |||||||||| |||||||||| |||| ||||| ||||||||| |||||||||| ACTTGTTCTT GTGTGATGAG ACCAACGAAC CTAATGCTCT GATACCAAGT TTTGTCACGA 179 CCCAAA-CCG GGTTGCGACT GGCACCCACA CTTACCCTCC TATGTGAGCG AACCAACCGA 94516 |||||| ||| || || ||| |||||||||| ||||||||| |||||||||| |||||||| | CCCAAATCCG GGCCGCCACT GGCACCCACA CTTACCCTCN TATGTGAGCG AACCAACCAA 239 TCTAAACCTT AACATTTCTA TGTAATAACA ACAGAAAGTA ATGCGGAACA CTT-AACTCA 94457 |||||||||| |||||||| | ||||||| || |||||||||| |||||||| | ||| |||||| TCTAAACCTT AACATTTCAA TGTAATAGCA ACAGAAAGTA ATGCGGAAGA CTTAAACTCA 299 TTAATAAAAA CCAATTCAAT AACTATCAAT ATTCAACATC TATTATTCCC AAAACCTGGA 94397 ||||| || || ||||| ||||| | | ||| |||||| |||||||||| |||||||||| TTAAT---AA --AA-TCAAT AACTACTATT ATTAAACATC TATTATTCCC AAAACCTGGA 353 AGTCATCATC ACAAGAACAT CTACGATCAA ATGACTAA-A CTAAGAGTAT TCTAA-AAGC 94339 |||||||||| |||||||||| |||| | || | ||||| |||||||| | ||||| |||| AGTCATCATC ACAAGAACAT CTAC-TTTAA ACTACTAATT CTAAGAGT-T TCTAAGAAGC 411 T-AAAAA-TA CATCAGAAGC TAGTCCATGC CAGAAGTTCA AGGCATCAAG ACTTGAAGAA 94281 | ||||| || ||| |||||| |||||||||| | |||||||| |||||||||| || ||||| | TAAAAAATTA CATAAGAAGC TAGTCCATGC CGGAAGTTCA AGGCATCAAG ACATGAAGGA 471 GGAGATCCAG TCCAAGCTAG AAGCATTAGC TCACCCTGAA TTTCCGATGT G-GTAAGACT 94222 | |||||||| |||||||||| |||| ||||| |||||||||| |||| ||| | |||||| GAAGATCCAG TCCAAGCTAG AAGCGTTAGC TCACCCTGAA GATCCGGTGT GACGAAGACT 531 GGCTTGAATT ACTGTTGAGT TGAAGACGAT GGCACGTTTG CTGCACTCCA CAAATAAACA 94162 ||||||| || |||||||||| ||||| || |||||||||| |||||||||| ||||| |||| GGCTTGAGTT ACTGTTGAGT CGAAGATGAC GGCACGTTTG CTGCACTCCA CAAAT-AACA 590 AGAAG-AAAA CATAAAAGTA GGGGTTAGTA CAAAACACGG GTACTCAGTA GATATCATCG 94103 ||||| |||| |||||||||| ||||| |||| |||||||||| |||| |||| |||||||||| AGAAGAAAAA CATAAAAGTA GGGGTCAGTA CAAAACACGG CTACTGAGTA GATATCATCG 650 GCCAA 94098 ||||| GCCAA 655 hqPGS_C10HBa0115K16.1-_SGN-E356696- (94753 94098) ******************************************************************************** EST sequence 75 -strand 580 n (File: SGN-E356206-) 1 GAAAAGTAAA AGCGTCCCCN TACCGTCCCT TAAGACTCTA CTAGACTTGT TCTTGTGTGA 61 TGAGACCAAC GACCCTAATG CTCTGATACC AAGTTTTGTC ACGACCCAAA TCCGGGCCGC 121 CACTGGCACC CACACTTACC CTCCTATGTG AGCGAACCAA CCAATCTAAA CCTTAACATT 181 TCAATGTAAT AGCAACAGAA AGTAATGCGG AAGACTTAAA CTCATTAATA AAATCAATAA 241 CTACTATTAT TAAACATCTA TTATTCCCAA AACCTGGAAG TCATCATCAC AAGAACATCT 301 ACTTTAAACT ACTAATTCTA AGAGTTTCTA AGAAGCTAAA AAATTACATA AGAAGCTAGT 361 CCATGCCGGA AGTTCAAGGC ATCAAGACAT GAAGGAGAAG ATCCAGTCCA AGCTAGAAGC 421 GTTAGCTCAC CCTGAAGATC CGGTGTGACG AAGACTGGCT TGAGTTACTG TTGAGTCGAA 481 GATGACGGCA CGTTTGCTGC ACTCCACAAA TAACAAGAAG AAAAACATAA AAGTAGGGGT 541 CAGTACAAAA CACGGCTACT GAGTAGATAT CATCGGCCAA Predicted gene structure (within gDNA segment 95530 to 93138): Exon 1 94677 94098 ( 580 n); cDNA 1 580 ( 580 n); score: 0.877 MATCH C10HBa0115K16.1- SGN-E356206- 0.877 580 1.000 C PGS_C10HBa0115K16.1-_SGN-E356206- (94677 94098) Alignment (genomic DNA sequence = upper lines): GAAAAGTAAA GGCGTCCCCC TACCGTTCCT TAAGACTCTA CTAGACCTGT TCTTGTGTGA 94618 |||||||||| |||||||| |||||| ||| |||||||||| |||||| ||| |||||||||| GAAAAGTAAA AGCGTCCCCN TACCGTCCCT TAAGACTCTA CTAGACTTGT TCTTGTGTGA 60 TGAGACCAAC GAACCTAAGG CTCTGATACC AAG-TTTGTC ACGACCCAAA -CCGGGTTGC 94560 |||||||||| || ||||| | |||||||||| ||| |||||| |||||||||| ||||| || TGAGACCAAC GACCCTAATG CTCTGATACC AAGTTTTGTC ACGACCCAAA TCCGGGCCGC 120 GACTGGCACC CACACTTACC CTCCTATGTG AGCGAACCAA CCGATCTAAA CCTTAACATT 94500 ||||||||| |||||||||| |||||||||| |||||||||| || ||||||| |||||||||| CACTGGCACC CACACTTACC CTCCTATGTG AGCGAACCAA CCAATCTAAA CCTTAACATT 180 TCTATGTAAT AACAACAGAA AGTAATGCGG AACACTT-AA CTCATTAATA AAAACCAATT 94441 || ||||||| | |||||||| |||||||||| || |||| || ||||||||| || || | TCAATGTAAT AGCAACAGAA AGTAATGCGG AAGACTTAAA CTCATTAAT- --AA--AA-T 234 CAATAACTAT CAATATTCAA CATCTATTAT TCCCAAAACC TGGAAGTCAT CATCACAAGA 94381 ||||||||| | |||| || |||||||||| |||||||||| |||||||||| |||||||||| CAATAACTAC TATTATTAAA CATCTATTAT TCCCAAAACC TGGAAGTCAT CATCACAAGA 294 ACATCTACGA TCAAATGACT AA-ACTAAGA GTATTCTAA- AAGCT-AAAA A-TACATCAG 94325 |||||||| | ||| ||| || |||||| || |||||| ||||| |||| | ||||| || ACATCTAC-T TTAAACTACT AATTCTAAGA GT-TTCTAAG AAGCTAAAAA ATTACATAAG 352 AAGCTAGTCC ATGCCAGAAG TTCAAGGCAT CAAGACTTGA AGAAGGAGAT CCAGTCCAAG 94265 |||||||||| ||||| |||| |||||||||| |||||| ||| || || |||| |||||||||| AAGCTAGTCC ATGCCGGAAG TTCAAGGCAT CAAGACATGA AGGAGAAGAT CCAGTCCAAG 412 CTAGAAGCAT TAGCTCACCC TGAATTTCCG ATGTG-GTAA GACTGGCTTG AATTACTGTT 94206 |||||||| | |||||||||| |||| |||| |||| || |||||||||| | |||||||| CTAGAAGCGT TAGCTCACCC TGAAGATCCG GTGTGACGAA GACTGGCTTG AGTTACTGTT 472 GAGTTGAAGA CGATGGCACG TTTGCTGCAC TCCACAAATA AACAAGAAG- AAAACATAAA 94147 |||| ||||| || |||||| |||||||||| ||||||||| ||||||||| |||||||||| GAGTCGAAGA TGACGGCACG TTTGCTGCAC TCCACAAAT- AACAAGAAGA AAAACATAAA 531 AGTAGGGGTT AGTACAAAAC ACGGGTACTC AGTAGATATC ATCGGCCAA 94098 ||||||||| |||||||||| |||| |||| |||||||||| ||||||||| AGTAGGGGTC AGTACAAAAC ACGGCTACTG AGTAGATATC ATCGGCCAA 580 hqPGS_C10HBa0115K16.1-_SGN-E356206- (94677 94098) ******************************************************************************** EST sequence 120 +strand 434 n (File: SGN-E222578+) 1 TTTTTTTTTT TTTTTTTTTA ATAAAAACCA ATTCAATAAC TATCAATATT CAACATCTAT 61 TATTCCCAAA ACCTGGAAGT CATCATCACA AGAACATCTA CTTTAAACTA CTAATTCTAA 121 GAGTTTCTAA AAGCTAAAAA TACATAAGAA GCTAGTCCAT GCCGGAGGTT CAAGGCATCA 181 AGACATGAAG GAGAAGATCC AGTCCAAGCT AGACGCGTTA GCTCACCCTG AAGATCCGGT 241 GTGACGAAGA CTGGCTTGAG TTACTGTTGA GTCGAAGATG ACGGCACGTT TGCTGCACTC 301 CACAACTTTC TAGATGGGGA CTTTCTTCAA GGCTTCGAGA TGGAAACTTG CTTGCAGAGC 361 TTCGAGTGTT ACCAGCTTCA AGATGGAGTT TCAGTGATGA GGCTTGCTAG TCTCGAGTTT 421 TTTTTTTTTT TTTT Predicted gene structure (within gDNA segment 95226 to 91440): Exon 1 94456 94169 ( 288 n); cDNA 18 305 ( 288 n); score: 0.899 PPA cDNA 17 1 MATCH C10HBa0115K16.1- SGN-E222578+ 0.899 288 0.664 C PGS_C10HBa0115K16.1-_SGN-E222578+ (94456 94169) Alignment (genomic DNA sequence = upper lines): TTAATAAAAA CCAATTCAAT AACTATCAAT ATTCAACATC TATTATTCCC AAAACCTGGA 94397 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTAATAAAAA CCAATTCAAT AACTATCAAT ATTCAACATC TATTATTCCC AAAACCTGGA 77 AGTCATCATC ACAAGAACAT CTACGATCAA ATGACTAA-A CTAAGAGTAT TCTAAAAGCT 94338 |||||||||| |||||||||| |||| | || | ||||| |||||||| | |||||||||| AGTCATCATC ACAAGAACAT CTAC-TTTAA ACTACTAATT CTAAGAGT-T TCTAAAAGCT 135 AAAAATACAT CAGAAGCTAG TCCATGCCAG AAGTTCAAGG CATCAAGACT TGAAGAAGGA 94278 |||||||||| ||||||||| |||||||| | | |||||||| ||||||||| ||||| || | AAAAATACAT AAGAAGCTAG TCCATGCCGG AGGTTCAAGG CATCAAGACA TGAAGGAGAA 195 GATCCAGTCC AAGCTAGAAG CATTAGCTCA CCCTGAATTT CCGATGTG-G TAAGACTGGC 94219 |||||||||| |||||||| | | |||||||| ||||||| | ||| |||| ||||||||| GATCCAGTCC AAGCTAGACG CGTTAGCTCA CCCTGAAGAT CCGGTGTGAC GAAGACTGGC 255 TTGAATTACT GTTGAGTTGA AGACGATGGC ACGTTTGCTG CACTCCACAA 94169 |||| ||||| ||||||| || ||| || ||| |||||||||| |||||||||| TTGAGTTACT GTTGAGTCGA AGATGACGGC ACGTTTGCTG CACTCCACAA 305 hqPGS_C10HBa0115K16.1-_SGN-E222578+ (94456 94169) ******************************************************************************** EST sequence 255 +strand 710 n (File: SGN-E392027+) 1 CCACAGCCCC AGTGGCTGGC TCAGTCGCAC CCTGTCCCGC CGGTGCTGGT GTTGATGCTG 61 GCGTAGTCGT TGCTCTAGTT CTAACCATCT GCGAAATAGA GTGAAGATGG TCAGATACCA 121 ATTTGTATCA CCTAGATACC AATTGGACCC AAGTAATAGC ACGAAAGAAG AAAGAATGGA 181 ATTTTCCAAA AGTCTTATAG CCTCTCAAGG AAAAGTAAAG GCATCCCCCT ACCGTTCCTT 241 AAGACTCTAC TAGACTCGTT CTTGTGTGAT GAGACCAACG AACCTAATGC TCTGATACCA 301 AGTTTGTCAC GACCAAAACC GGGTTGCGAC TGGCACCCAC ACTTACCCTC CTATGTGAGC 361 GAACCAACCA ATCTAACCTT AACATTTCAA TATAATATCA ACAGAAAGTA ATGTGGAAGA 421 CTTAAACTCA TTAAATACAG ACCAATTCAT TAACTTCTAA AATTCAACAT CTATTATTCC 481 CCAAAATCTG GAAGTCATCA CCACAAGAAC ATCTACGATC AAATGACTAA ACTAAGAGTA 541 GTCTAAAAGC TAAAAATACA TAAGAAGCTA GTCCATGCCG GAAGTTCAAG GCATCAAGAC 601 TTGAAGAAGA AGATCCAGTC CAAGCTAGAA GCATTAGCTC ACCCTGAATT TCCGATGTAG 661 TAAGACTGGC TTGAATTACT GTTGAGTTGA ACACGATGGC ACGTTTGCTG Predicted gene structure (within gDNA segment 96041 to 93569): Exon 1 94845 94179 ( 667 n); cDNA 48 710 ( 663 n); score: 0.921 MATCH C10HBa0115K16.1- SGN-E392027+ 0.921 667 0.939 C PGS_C10HBa0115K16.1-_SGN-E392027+ (94845 94179) Alignment (genomic DNA sequence = upper lines): GGTGTTGGTG TTGACGTAGT CGTTGCTCTA GTTCTAACCA TCTGCGAAAG AGAGTGAAGA 94786 ||||||| || || |||||| |||||||||| |||||||||| ||||||||| |||||||||| GGTGTTGATG CTGGCGTAGT CGTTGCTCTA GTTCTAACCA TCTGCGAAAT AGAGTGAAGA 107 TGGTCAGATA CCAATTCGTA TCGCCTAGAT ACCAATTGGA CTCAAGTAGT AGCATAAAAG 94726 |||||||||| |||||| ||| || ||||||| |||||||||| | |||||| | ||| | | TGGTCAGATA CCAATTTGTA TCACCTAGAT ACCAATTGGA CCCAAGTAAT AGC----ACG 163 AAAGAATGAA AGAGTGAAAT TTTTCCGAAA GTCTTATAGC CTCTCAAGGA AAAGTAAAGG 94666 |||||| ||| ||| || || |||||| ||| |||||||||| |||||||||| |||||||||| AAAGAA-GAA AGAATGGAA- TTTTCCAAAA GTCTTATAGC CTCTCAAGGA AAAGTAAAGG 221 CGTCCCCCTA CCGTTCCTTA AGACTCTACT AGACCTGTTC TTGTGTGATG AGACCAACGA 94606 | |||||||| |||||||||| |||||||||| |||| |||| |||||||||| |||||||||| CATCCCCCTA CCGTTCCTTA AGACTCTACT AGACTCGTTC TTGTGTGATG AGACCAACGA 281 ACCTAAGGCT CTGATACCAA GTTTGTCACG ACCCAAACCG GGTTGCGACT GGCACCCACA 94546 |||||| ||| |||||||||| |||||||||| ||| |||||| |||||||||| |||||||||| ACCTAATGCT CTGATACCAA GTTTGTCACG ACCAAAACCG GGTTGCGACT GGCACCCACA 341 CTTACCCTCC TATGTGAGCG AACCAACCGA TCTAAACCTT AACATTTCTA TGTAATAACA 94486 |||||||||| |||||||||| |||||||| | ||| |||||| |||||||| | | ||||| || CTTACCCTCC TATGTGAGCG AACCAACCAA TCT-AACCTT AACATTTCAA TATAATATCA 400 ACAGAAAGTA ATGCGGAACA CTT-AACTCA TT-AATAAAA ACCAATTCAA TAACTATCAA 94428 |||||||||| ||| |||| | ||| |||||| || |||| | ||||||||| ||||| || ACAGAAAGTA ATGTGGAAGA CTTAAACTCA TTAAATACAG ACCAATTCAT TAACTTCTAA 460 TATTCAACAT CTATTATT-C CCAAAACCTG GAAGTCATCA TCACAAGAAC ATCTACGATC 94369 ||||||||| |||||||| | |||||| ||| |||||||||| ||||||||| |||||||||| AATTCAACAT CTATTATTCC CCAAAATCTG GAAGTCATCA CCACAAGAAC ATCTACGATC 520 AAATGACTAA ACTAAGAGTA TTCTAAAAGC TAAAAATACA TCAGAAGCTA GTCCATGCCA 94309 |||||||||| |||||||||| ||||||||| |||||||||| | |||||||| ||||||||| AAATGACTAA ACTAAGAGTA GTCTAAAAGC TAAAAATACA TAAGAAGCTA GTCCATGCCG 580 GAAGTTCAAG GCATCAAGAC TTGAAGAAGG AGATCCAGTC CAAGCTAGAA GCATTAGCTC 94249 |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| |||||||||| GAAGTTCAAG GCATCAAGAC TTGAAGAAGA AGATCCAGTC CAAGCTAGAA GCATTAGCTC 640 ACCCTGAATT TCCGATGTGG TAAGACTGGC TTGAATTACT GTTGAGTTGA AGACGATGGC 94189 |||||||||| |||||||| | |||||||||| |||||||||| |||||||||| | |||||||| ACCCTGAATT TCCGATGTAG TAAGACTGGC TTGAATTACT GTTGAGTTGA ACACGATGGC 700 ACGTTTGCTG 94179 |||||||||| ACGTTTGCTG 710 hqPGS_C10HBa0115K16.1-_SGN-E392027+ (94845 94179) ******************************************************************************** EST sequence 118 +strand 679 n (File: SGN-E370357+) 1 TTTTTTTTTT CTTACAATTA TATTATGAAT TCGATAATCT TTAATGTCAC GACCCAAATC 61 GAGCCGCAAG TGGCACCCAC ACTTACCCTC CTATGTGAGC GAACCAACCA ATACAAAATC 121 CAACATTTCA ATATAATGAC GGAATATAAT GCGGAAGACT TAAACTCATT AATGAAAATC 181 AATTAAATAA CTTCTAAAAA CTCAACAACT ATTATTATCC CCAAAATCTG GAAGTCATCA 241 TCACAAGAAC ATCTATCCTC AAATTACTAA TTCTAAGAGT ATCTAGAAAG CTAGAATAAC 301 TAAAAAGCTA GTCCATGCCG GAACTTCAAG GCATCAAGAC ATGAAGAAGA AGATCCAGTC 361 CAAGCTAGAA GCGTTAGCTC ACACTGAAAT CCGGTATAAT GAAGACTGGC TAGAGTTGCG 421 GTTGAGTTGA AGACGACGGT ACGTTTGCTT TATTCGAGTG TCAATTAATC ATTCGGCTGT 481 CACCCAAATA TTATTGATTG ATTACACCTC TGCCATTTGT AAAATTTTTC AAATTTGCCT 541 ACGGATGCAG AATTTTCCTC GAATTTCTGA TGTGTTTTCT TGTAAATAGT GGCCATTTGT 601 GTAAGTAAAT GCCCATTTCT CCTCCTACAA AGTCCAATTC CATTTTTCCC CCAATCCACC 661 ATGGCAACAC CACCTCCAA Predicted gene structure (within gDNA segment 95856 to 90577): Exon 1 94582 94180 ( 403 n); cDNA 45 449 ( 405 n); score: 0.797 PPA cDNA 13 1 MATCH C10HBa0115K16.1- SGN-E370357+ 0.797 403 0.594 C PGS_C10HBa0115K16.1-_SGN-E370357+ (94582 94180) Alignment (genomic DNA sequence = upper lines): TGTCACGACC CAAACCGGGT TGCGACTGGC ACCCACACTT ACCCTCCTAT GTGAGCGAAC 94523 |||||||||| |||| || | || | |||| |||||||||| |||||||||| |||||||||| TGTCACGACC CAAATCGAGC CGCAAGTGGC ACCCACACTT ACCCTCCTAT GTGAGCGAAC 104 CAACCGATCT AAACCTTAAC ATTTCTATGT AATAACAACA GAAAGTAATG CGGAACACTT 94463 ||||| || ||| ||| ||||| || | ||| || | | | ||||| ||||| |||| CAACCAATAC AAAATCCAAC ATTTCAATAT AATGAC-GGA -ATA-TAATG CGGAAGACTT 161 -AACTCATTA ATAAAAACCA ATTCAATAAC -TATCAATAT TCAACATCTA TTA-T-T-CC 94408 ||||||||| || |||| || ||| |||||| | | || | |||||| ||| ||| | | || AAACTCATTA ATGAAAATCA ATTAAATAAC TTCTAAAAAC TCAACAACTA TTATTATCCC 221 CAAAACCTGG AAGTCATCAT CACAAGAACA TCTACGATCA AATGACTAA- ACTAAGAGTA 94349 ||||| |||| |||||||||| |||||||||| |||| ||| ||| ||||| ||||||||| CAAAATCTGG AAGTCATCAT CACAAGAACA TCTATCCTCA AATTACTAAT TCTAAGAGTA 281 TTCTA-AAAG CTAAAAATAC ATCAGAAGCT AGTCCATGCC AGAAGTTCAA GGCATCAAGA 94290 |||| |||| || | |||| | | ||||| |||||||||| ||| ||||| |||||||||| -TCTAGAAAG CT-AGAATAA CTAAAAAGCT AGTCCATGCC GGAACTTCAA GGCATCAAGA 339 CTTGAAGAAG GAGATCCAGT CCAAGCTAGA AGCATTAGCT CACCCTGAAT TTCCGATGTG 94230 | |||||||| ||||||||| |||||||||| ||| |||||| ||| ||||| |||| | | CATGAAGAAG AAGATCCAGT CCAAGCTAGA AGCGTTAGCT CACACTGAA- ATCCGGTATA 398 GT-AAGACTG GCTTGAATTA CTGTTGAGTT GAAGACGATG GCACGTTTGC T 94180 | ||||||| ||| || || | |||||||| |||||||| | | |||||||| | ATGAAGACTG GCTAGAGTTG CGGTTGAGTT GAAGACGACG GTACGTTTGC T 449 hqPGS_C10HBa0115K16.1-_SGN-E370357+ (94582 94180) ******************************************************************************** EST sequence 268 +strand 265 n (File: SGN-E216150+) 1 TTTTTTTTTT TTTTTTTTAA TAAAAATCAA TAATCAACTT GTATAACTCA AAACTTATCA 61 TTCCCCAAAA TCTGGAAGTC ATCATCACCA GAGCCTCTAT CATAAAATTA CTAAACTAAG 121 AGTATTCTAA GAAGCTAAAA ATACATACGA AGCTAGTCCA TGCCGGAAGT TCAAGGCATC 181 AAGACTTGAA GAAGAAGATC CAGTCAAACC TAGAAGCATT AGCTCACCCT GAATTTCCGA 241 TGTAGTAGGA CTGGCTTGAG TTACT Predicted gene structure (within gDNA segment 96053 to 93401): Exon 1 94409 94209 ( 201 n); cDNA 64 265 ( 202 n); score: 0.903 PPA cDNA 18 1 MATCH C10HBa0115K16.1- SGN-E216150+ 0.903 201 0.758 C PGS_C10HBa0115K16.1-_SGN-E216150+ (94409 94209) Alignment (genomic DNA sequence = upper lines): CCCAAAACCT GGAAGTCATC ATCACAAGAA CATCTACGAT CAAATGACTA AACTAAGAGT 94350 ||||||| || |||||||||| ||||| ||| | |||| || |||| |||| |||||||||| CCCAAAATCT GGAAGTCATC ATCACCAGAG CCTCTATCAT AAAATTACTA AACTAAGAGT 123 ATTCTAA-AA GCTAAAAATA CATCAGAAGC TAGTCCATGC CAGAAGTTCA AGGCATCAAG 94291 ||||||| || |||||||||| ||| ||||| |||||||||| | |||||||| |||||||||| ATTCTAAGAA GCTAAAAATA CATACGAAGC TAGTCCATGC CGGAAGTTCA AGGCATCAAG 183 ACTTGAAGAA GGAGATCCAG TCCAAGCTAG AAGCATTAGC TCACCCTGAA TTTCCGATGT 94231 |||||||||| | |||||||| || || |||| |||||||||| |||||||||| |||||||||| ACTTGAAGAA GAAGATCCAG TCAAACCTAG AAGCATTAGC TCACCCTGAA TTTCCGATGT 243 GGTAAGACTG GCTTGAATTA CT 94209 ||| ||||| |||||| ||| || AGTAGGACTG GCTTGAGTTA CT 265 hqPGS_C10HBa0115K16.1-_SGN-E216150+ (94409 94209) ******************************************************************************** EST sequence 67 -strand 286 n (File: SGN-E355114-) 1 CCACAGCCCC AGTGGCTGGC TCAGTTGTTT CTTGTCTGGC CGGTGTTGGT GTTGACGTGG 61 TCGTTGCTCT AGTTCTAACC ATCTGCAAAA GAGAGTGAAG ATGGTCAGAT ACCAATTTGT 121 ATCGCCTAGA TACCAATTGG ACTCAAGTAG TAGCACGAAA GAAAGAATGA AAGGGTGAAA 181 TTTTCCTAAA GTCTTATAGC CTCTCAAAGA AAAGTAAAGG CGTCCCCCTA CCGTTCCTAA 241 AGACTCTACT AGACCTGTTC TTGTGTGATG AGACCAACGA ACCTAA Predicted gene structure (within gDNA segment 95550 to 94000): Exon 1 94886 94600 ( 287 n); cDNA 1 286 ( 286 n); score: 0.958 MATCH C10HBa0115K16.1- SGN-E355114- 0.958 287 1.003 C PGS_C10HBa0115K16.1-_SGN-E355114- (94886 94600) Alignment (genomic DNA sequence = upper lines): CCACAACCCC AGTGGCTGGC TCCGTTGTTT CTTGTCTGGC CGGTGTTGGT GTTGACGTAG 94827 ||||| |||| |||||||||| || ||||||| |||||||||| |||||||||| |||||||| | CCACAGCCCC AGTGGCTGGC TCAGTTGTTT CTTGTCTGGC CGGTGTTGGT GTTGACGTGG 60 TCGTTGCTCT AGTTCTAACC ATCTGCGAAA GAGAGTGAAG ATGGTCAGAT ACCAATTCGT 94767 |||||||||| |||||||||| |||||| ||| |||||||||| |||||||||| ||||||| || TCGTTGCTCT AGTTCTAACC ATCTGCAAAA GAGAGTGAAG ATGGTCAGAT ACCAATTTGT 120 ATCGCCTAGA TACCAATTGG ACTCAAGTAG TAGCATAAAA GAAAGAATGA AAGAGTGAAA 94707 |||||||||| |||||||||| |||||||||| ||||| ||| |||||||||| ||| |||||| ATCGCCTAGA TACCAATTGG ACTCAAGTAG TAGCACGAAA GAAAGAATGA AAGGGTGAAA 180 TTTTTCCGAA AGTCTTATAG CCTCTCAAGG AAAAGTAAAG GCGTCCCCCT ACCGTTCCTT 94647 |||||| || |||||||||| |||||||| | |||||||||| |||||||||| ||||||||| -TTTTCCTAA AGTCTTATAG CCTCTCAAAG AAAAGTAAAG GCGTCCCCCT ACCGTTCCTA 239 AAGACTCTAC TAGACCTGTT CTTGTGTGAT GAGACCAACG AACCTAA 94600 |||||||||| |||||||||| |||||||||| |||||||||| ||||||| AAGACTCTAC TAGACCTGTT CTTGTGTGAT GAGACCAACG AACCTAA 286 hqPGS_C10HBa0115K16.1-_SGN-E355114- (94886 94600) ******************************************************************************** EST sequence 209 +strand 433 n (File: SGN-E352180+) 1 CCCTTGAAGA CCGGAGGTTT CAATTTCAAG AACTTACTGA AAAGTTCATG CTGATCATTT 61 GTCATTATAG GCCCAGTAGT CAAACGTGGA AATGTACCTA TGTGCAATGG AACATCCATG 121 CGGGGAGCCA TAGTAGCCGC ATGTTGTACT TCTGAAACCG GAGGTGTTGG CGCAGAAAAC 181 ACTGGAGGTG CTTGACCTTG ATCAGATAAA CCGCTAAGAT AAGCCAGAAC CTGATTGATC 241 ATCTCTGGGG TAGGTTGGGG TGGCATTTCC TCATTTTGCA CTTGTTCAGT TTCCCCATCC 301 TCCCCTTCTC TTATTACTTC CTCAGTCGGT GGAGGAGTCA CCGCCCTAGT ACCAGATGGG 361 CTCGGTTCTC GTTCTCTTCC TCTAGATGAC GTCCTCCCAC GACCTCTACC ACGGCCCCTT 421 GCCGCTGTTC TCC Predicted gene structure (within gDNA segment 96078 to 94247): Exon 1 95325 94897 ( 429 n); cDNA 1 429 ( 429 n); score: 0.946 MATCH C10HBa0115K16.1- SGN-E352180+ 0.946 429 0.991 C PGS_C10HBa0115K16.1-_SGN-E352180+ (95325 94897) Alignment (genomic DNA sequence = upper lines): CCCTTGAAGA CTGGAGTTTT CAATTTCAAG AACATACTGA AAAGTTCATG CTGATCATTT 95266 |||||||||| | |||| ||| |||||||||| ||| |||||| |||||||||| |||||||||| CCCTTGAAGA CCGGAGGTTT CAATTTCAAG AACTTACTGA AAAGTTCATG CTGATCATTT 60 GTCATTATAG GCCCAGTAGT CAGACGTGGA AACGTGCCTA TTTCCAATGG AACATCCATG 95206 |||||||||| |||||||||| || ||||||| || || |||| | | |||||| |||||||||| GTCATTATAG GCCCAGTAGT CAAACGTGGA AATGTACCTA TGTGCAATGG AACATCCATG 120 CGGGGAGCCA TAGTAGCCGC ATGTTGTACT TCTGAAACCG GAGGTGTTGG CGCAGAAAAC 95146 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGGGGAGCCA TAGTAGCCGC ATGTTGTACT TCTGAAACCG GAGGTGTTGG CGCAGAAAAC 180 ACTGGAGGTG CCTGACCTTG ATCAGATAAC CCGCTAAGAT AAGTCAGAAC CTGATTGATC 95086 |||||||||| | |||||||| ||||||||| |||||||||| ||| |||||| |||||||||| ACTGGAGGTG CTTGACCTTG ATCAGATAAA CCGCTAAGAT AAGCCAGAAC CTGATTGATC 240 ATCTCTAGGG TAGGTTGGGG TGGCATTTCC TCATTTTGCA CTTGTTCAGT TTCTCCATCC 95026 |||||| ||| |||||||||| |||||||||| |||||||||| |||||||||| ||| |||||| ATCTCTGGGG TAGGTTGGGG TGGCATTTCC TCATTTTGCA CTTGTTCAGT TTCCCCATCC 300 TCCCCTTCTC TTATTACTTC CTCGGTCGGT GGAGGAGTCA CTGCCCTAGT ATCAGATGGG 94966 |||||||||| |||||||||| ||| |||||| |||||||||| | |||||||| | |||||||| TCCCCTTCTC TTATTACTTC CTCAGTCGGT GGAGGAGTCA CCGCCCTAGT ACCAGATGGG 360 CTAGGTGCTT GTCCTCTCCC TCTAGAGGAC GTCCTCCCAC GACCTCTTCC ACGGCCCCTT 94906 || ||| || || |||| || |||||| ||| |||||||||| ||||||| || |||||||||| CTCGGTTCTC GTTCTCTTCC TCTAGATGAC GTCCTCCCAC GACCTCTACC ACGGCCCCTT 420 GCCGCTGTT 94897 ||||||||| GCCGCTGTT 429 hqPGS_C10HBa0115K16.1-_SGN-E352180+ (95325 94897) ******************************************************************************** EST sequence 87 -strand 554 n (File: SGN-E329287-) 1 AGAATGATGC CCAAGTCATA CGTGGTGCCT CTGTTGGTTG ACACTCAACA TGTGACCGCC 61 ACCACATTTT GGCGTTCCCT TGAAACTGAT AAGTCACAAA CTCAACACCA AACCGTTCTA 121 CTATACCCAT CTTGTGTAGT AGCTCATGAC AGTCAACCAG AAAATCGTAG GCATCCTCAG 181 ATTCAACACC CTTGTAGACT TGAGGTTTCA ATTTCAAGAA CTTACTAAAA AGTTCATGCT 241 GATCATTTGT CATTATAGGC CCTGTAGTCA GACGGGGAAA CGTTCCTATT TCCAATGAGG 301 TATCGATGCG GGGAGTCACA GTAGGCGCAT GTTGTACCTC CGGAGCCTGA GGTGCTAGTG 361 CAGAAAACAC TGGAGGTGCT TGGCCTTGAT CAGATAACCC GCTAAGGTAA GCAAGAACCT 421 GATTGATCAT CTCTTGGGTA GGTTGGGGTG GCAATTCCTC ATTCTGCACT TGTTCATTCT 481 CCCCATCCTC ACCCTCTCTT ACCACTTCCT CAGTTGGTGG AGGTGTCACC GCCTTAGTAC 541 CAGATGGGCT AGGT Predicted gene structure (within gDNA segment 96564 to 93451): Exon 1 95513 94960 ( 554 n); cDNA 1 554 ( 554 n); score: 0.897 MATCH C10HBa0115K16.1- SGN-E329287- 0.897 554 1.000 C PGS_C10HBa0115K16.1-_SGN-E329287- (95513 94960) Alignment (genomic DNA sequence = upper lines): AGAATGAGGC CCAAGTCATA GGTGGTGCCT CTATTGGTTG ACACTCGATA TGTGACCGCC 95454 ||||||| || |||||||||| ||||||||| || ||||||| |||||| | | |||||||||| AGAATGATGC CCAAGTCATA CGTGGTGCCT CTGTTGGTTG ACACTCAACA TGTGACCGCC 60 ACCACATTTT GGCATTCCCT TGAAACTGAT AAGTCACAAA CTCCACACCA AACCGTTCTA 95394 |||||||||| ||| |||||| |||||||||| |||||||||| ||| |||||| |||||||||| ACCACATTTT GGCGTTCCCT TGAAACTGAT AAGTCACAAA CTCAACACCA AACCGTTCTA 120 CTATACCCAT CTTGTGTAGT AGCTCGTGAC AGTCAACCAG AAAATCATAA GCATCCTCAG 95334 |||||||||| |||||||||| ||||| |||| |||||||||| |||||| || |||||||||| CTATACCCAT CTTGTGTAGT AGCTCATGAC AGTCAACCAG AAAATCGTAG GCATCCTCAG 180 ATTCCGCACC CTTGAAGACT GGAGTTTTCA ATTTCAAGAA CATACTGAAA AGTTCATGCT 95274 |||| |||| |||| ||||| ||| ||||| |||||||||| | |||| ||| |||||||||| ATTCAACACC CTTGTAGACT TGAGGTTTCA ATTTCAAGAA CTTACTAAAA AGTTCATGCT 240 GATCATTTGT CATTATAGGC CCAGTAGTCA GACGTGGAAA CGTGCCTATT TCCAATGGAA 95214 |||||||||| |||||||||| || ||||||| |||| ||||| ||| |||||| ||||||| GATCATTTGT CATTATAGGC CCTGTAGTCA GACGGGGAAA CGTTCCTATT TCCAATGAGG 300 CATCCATGCG GGGAGCCATA GTAGCCGCAT GTTGTACTTC TGAAACCGGA GGTGTTGGCG 95154 ||| ||||| ||||| || | |||| ||||| ||||||| || | | || || |||| | | | TATCGATGCG GGGAGTCACA GTAGGCGCAT GTTGTACCTC CGGAGCCTGA GGTGCTAGTG 360 CAGAAAACAC TGGAGGTGCC TGACCTTGAT CAGATAACCC GCTAAGATAA GTCAGAACCT 95094 |||||||||| ||||||||| || ||||||| |||||||||| |||||| ||| | ||||||| CAGAAAACAC TGGAGGTGCT TGGCCTTGAT CAGATAACCC GCTAAGGTAA GCAAGAACCT 420 GATTGATCAT CTCTAGGGTA GGTTGGGGTG GCATTTCCTC ATTTTGCACT TGTTCAGTTT 95034 |||||||||| |||| ||||| |||||||||| ||| |||||| ||| |||||| |||||| | | GATTGATCAT CTCTTGGGTA GGTTGGGGTG GCAATTCCTC ATTCTGCACT TGTTCATTCT 480 CTCCATCCTC CCCTTCTCTT ATTACTTCCT CGGTCGGTGG AGGAGTCACT GCCCTAGTAT 94974 | |||||||| || |||||| | ||||||| | || ||||| ||| ||||| ||| ||||| CCCCATCCTC ACCCTCTCTT ACCACTTCCT CAGTTGGTGG AGGTGTCACC GCCTTAGTAC 540 CAGATGGGCT AGGT 94960 |||||||||| |||| CAGATGGGCT AGGT 554 hqPGS_C10HBa0115K16.1-_SGN-E329287- (95513 94960) ******************************************************************************** EST sequence 247 +strand 720 n (File: SGN-E356614+) 1 GCGAATCCGC TCTTGAGGAC TGAAACAGAG TTGAGTGGCA TATCTGGATA GTGCACGAAA 61 CTTAGCCTCA TAAGCATTAA CTGACACCCT ACCTTGCTCT AGGCTCAAGA ACTCATCCCT 121 TTTCTTATCC CTCAAAGTCC GGGGGATATA CTTCTCCATA AACAAACTAT AGAATGAGGC 181 CCAAGTCATA GGTGATGCCT CTATTGGTTG ACACTCGATA TGTGACCGCC ACCACATTTG 241 GGCGTTCCCT TGAAACTGAT AAGTCACAAA CTCCACACCA AACCGTTCTA CTATACCCAT 301 CTTGTGTAGT AGCTCGTGAC AGTCAACCAG AAAATCATAA GCATCCTCCG ATTCAGCACC 361 CTTGAAGACC GGAGGTTTCA ATTTCAAGAA CTTACTGAAA AGTTCATGCT GATCATTTGT 421 CATTATAGGG ACAGTAGTCA AACGTGGAAA TGTGCCTATG TCCAATGGAA CATCCATGCG 481 GGGAGCCATA GTAGCCGCAT GTTGTACTTC TGAAACCGGA GGTGTTGGCG CAGAAAACAC 541 TGGAGGTGCT TGACCTTGAT CAGATAACCC GCTAAGATAA GCCAGAACCT GATTGATCAT 601 CTCTGGGGTA GGTTGGGGTG GCATTTCCTC ATTTTGCACT TGNTCAGTTT CCCCATCCCT 661 CCCTTTCTCT ATTACTTCCT CAGTCAGTGG AAGAGTCACT GCCCTAGTAT CAGATGGGCT Predicted gene structure (within gDNA segment 96283 to 93652): Exon 1 95683 94964 ( 720 n); cDNA 1 720 ( 720 n); score: 0.955 MATCH C10HBa0115K16.1- SGN-E356614+ 0.955 720 1.000 C PGS_C10HBa0115K16.1-_SGN-E356614+ (95683 94964) Alignment (genomic DNA sequence = upper lines): GCGAATCCGC TCTTGAGGAC TGAAACAGAG TTGAGTGGCA TATCTAGATA ATGCACGAAA 95624 |||||||||| |||||||||| |||||||||| |||||||||| ||||| |||| ||||||||| GCGAATCCGC TCTTGAGGAC TGAAACAGAG TTGAGTGGCA TATCTGGATA GTGCACGAAA 60 CTTAGCCTCA TAAGCATTAA CCGACATCCT ACCTTGCTCT AGGCTCAAGA ACTCATCCCT 95564 |||||||||| |||||||||| | |||| ||| |||||||||| |||||||||| |||||||||| CTTAGCCTCA TAAGCATTAA CTGACACCCT ACCTTGCTCT AGGCTCAAGA ACTCATCCCT 120 TTTCCTATCC CTCAAAGTTC GGGGGATATA CTTCTCCATA AACAAACTAG AGAATGAGGC 95504 |||| ||||| |||||||| | |||||||||| |||||||||| ||||||||| |||||||||| TTTCTTATCC CTCAAAGTCC GGGGGATATA CTTCTCCATA AACAAACTAT AGAATGAGGC 180 CCAAGTCATA GGTGGTGCCT CTATTGGTTG ACACTCGATA TGTGACCGCC ACCACATTTT 95444 |||||||||| |||| ||||| |||||||||| |||||||||| |||||||||| ||||||||| CCAAGTCATA GGTGATGCCT CTATTGGTTG ACACTCGATA TGTGACCGCC ACCACATTTG 240 GGCATTCCCT TGAAACTGAT AAGTCACAAA CTCCACACCA AACCGTTCTA CTATACCCAT 95384 ||| |||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGCGTTCCCT TGAAACTGAT AAGTCACAAA CTCCACACCA AACCGTTCTA CTATACCCAT 300 CTTGTGTAGT AGCTCGTGAC AGTCAACCAG AAAATCATAA GCATCCTCAG ATTCCGCACC 95324 |||||||||| |||||||||| |||||||||| |||||||||| |||||||| | |||| ||||| CTTGTGTAGT AGCTCGTGAC AGTCAACCAG AAAATCATAA GCATCCTCCG ATTCAGCACC 360 CTTGAAGACT GGAGTTTTCA ATTTCAAGAA CATACTGAAA AGTTCATGCT GATCATTTGT 95264 ||||||||| |||| ||||| |||||||||| | |||||||| |||||||||| |||||||||| CTTGAAGACC GGAGGTTTCA ATTTCAAGAA CTTACTGAAA AGTTCATGCT GATCATTTGT 420 CATTATAGGC CCAGTAGTCA GACGTGGAAA CGTGCCTATT TCCAATGGAA CATCCATGCG 95204 ||||||||| ||||||||| ||||||||| |||||||| |||||||||| |||||||||| CATTATAGGG ACAGTAGTCA AACGTGGAAA TGTGCCTATG TCCAATGGAA CATCCATGCG 480 GGGAGCCATA GTAGCCGCAT GTTGTACTTC TGAAACCGGA GGTGTTGGCG CAGAAAACAC 95144 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGGAGCCATA GTAGCCGCAT GTTGTACTTC TGAAACCGGA GGTGTTGGCG CAGAAAACAC 540 TGGAGGTGCC TGACCTTGAT CAGATAACCC GCTAAGATAA GTCAGAACCT GATTGATCAT 95084 ||||||||| |||||||||| |||||||||| |||||||||| | |||||||| |||||||||| TGGAGGTGCT TGACCTTGAT CAGATAACCC GCTAAGATAA GCCAGAACCT GATTGATCAT 600 CTCTAGGGTA GGTTGGGGTG GCATTTCCTC ATTTTGCACT TGTTCAGTTT CTCCAT-CCT 95025 |||| ||||| |||||||||| |||||||||| |||||||||| || ||||||| | |||| ||| CTCTGGGGTA GGTTGGGGTG GCATTTCCTC ATTTTGCACT TGNTCAGTTT CCCCATCCCT 660 CCCCTTCTCT TATTACTTCC TCGGTCGGTG GAGGAGTCAC TGCCCTAGTA TCAGATGGGC 94965 ||| ||||| |||||||||| || ||| ||| || ||||||| |||||||||| |||||||||| CCCTTTCTC- TATTACTTCC TCAGTCAGTG GAAGAGTCAC TGCCCTAGTA TCAGATGGGC 719 T 94964 | T 720 hqPGS_C10HBa0115K16.1-_SGN-E356614+ (95683 94964) ******************************************************************************** EST sequence 150 +strand 664 n (File: SGN-E352401+) 1 AATCCGCTCT TGAGGACTGA AACAGAGTTG AGTGGCATAT CTGGATAGTG CACGAAACTT 61 AGCCTCATAA GCATTAACTG ACACCCTACC TTGCTCTAGG CTCAAGAACT CATCCCTTTT 121 CTTATCCCTC AAAGTCCGGG GGATATACTT CTCCATAAAC AAACTATAGA ATGAGGCCCA 181 AGTCATAGGT GATGCCTCTA TTGGTTGACA CTCGATATGT GACCGCCACC ACATTTGGGC 241 GTTCCCTTGA AACTGATAAG TCACAAACTC CACACCAAAC CGTTCTACTA TACCCATCTT 301 GTGTAGTAGC TCGTGACAGT CAACCAGAAA ATCATAAGCA TCCTCCGATT CAGCACCCTT 361 GAAGACCGGA GGTTTCAATT TCAAGAACTT ACTGAAAAGT TCATGCTGAT CATTTGTCAT 421 TATAGGGACA GTAGTCAAAC GTGGAAATGT GCCTATGTCC AATGGAACAT CCATGCGGGG 481 AGCCATAGTA GCCGCATGTT GTACTTCTGA AACCGGAGGT GTTGGCGCAG AAAACACTGG 541 AGGTGCTTGA CCTTGATCAG ATAACCCGCT AAGATAAGCC AGAACCTGAT TGATCATCTC 601 TGGGGTAGGT TGGGGTGCCA TTTCCCTCAT TTGCACTTGT TCAGTTTCCC CATCCTCCCC 661 TTCT Predicted gene structure (within gDNA segment 96280 to 93840): Exon 1 95680 95017 ( 664 n); cDNA 1 664 ( 664 n); score: 0.956 MATCH C10HBa0115K16.1- SGN-E352401+ 0.956 664 1.000 C PGS_C10HBa0115K16.1-_SGN-E352401+ (95680 95017) Alignment (genomic DNA sequence = upper lines): AATCCGCTCT TGAGGACTGA AACAGAGTTG AGTGGCATAT CTAGATAATG CACGAAACTT 95621 |||||||||| |||||||||| |||||||||| |||||||||| || |||| || |||||||||| AATCCGCTCT TGAGGACTGA AACAGAGTTG AGTGGCATAT CTGGATAGTG CACGAAACTT 60 AGCCTCATAA GCATTAACCG ACATCCTACC TTGCTCTAGG CTCAAGAACT CATCCCTTTT 95561 |||||||||| |||||||| | ||| |||||| |||||||||| |||||||||| |||||||||| AGCCTCATAA GCATTAACTG ACACCCTACC TTGCTCTAGG CTCAAGAACT CATCCCTTTT 120 CCTATCCCTC AAAGTTCGGG GGATATACTT CTCCATAAAC AAACTAGAGA ATGAGGCCCA 95501 | |||||||| ||||| |||| |||||||||| |||||||||| |||||| ||| |||||||||| CTTATCCCTC AAAGTCCGGG GGATATACTT CTCCATAAAC AAACTATAGA ATGAGGCCCA 180 AGTCATAGGT GGTGCCTCTA TTGGTTGACA CTCGATATGT GACCGCCACC ACATTTTGGC 95441 |||||||||| | |||||||| |||||||||| |||||||||| |||||||||| |||||| ||| AGTCATAGGT GATGCCTCTA TTGGTTGACA CTCGATATGT GACCGCCACC ACATTTGGGC 240 ATTCCCTTGA AACTGATAAG TCACAAACTC CACACCAAAC CGTTCTACTA TACCCATCTT 95381 ||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTCCCTTGA AACTGATAAG TCACAAACTC CACACCAAAC CGTTCTACTA TACCCATCTT 300 GTGTAGTAGC TCGTGACAGT CAACCAGAAA ATCATAAGCA TCCTCAGATT CCGCACCCTT 95321 |||||||||| |||||||||| |||||||||| |||||||||| ||||| |||| | |||||||| GTGTAGTAGC TCGTGACAGT CAACCAGAAA ATCATAAGCA TCCTCCGATT CAGCACCCTT 360 GAAGACTGGA GTTTTCAATT TCAAGAACAT ACTGAAAAGT TCATGCTGAT CATTTGTCAT 95261 |||||| ||| | |||||||| |||||||| | |||||||||| |||||||||| |||||||||| GAAGACCGGA GGTTTCAATT TCAAGAACTT ACTGAAAAGT TCATGCTGAT CATTTGTCAT 420 TATAGGCCCA GTAGTCAGAC GTGGAAACGT GCCTATTTCC AATGGAACAT CCATGCGGGG 95201 |||||| || ||||||| || ||||||| || |||||| ||| |||||||||| |||||||||| TATAGGGACA GTAGTCAAAC GTGGAAATGT GCCTATGTCC AATGGAACAT CCATGCGGGG 480 AGCCATAGTA GCCGCATGTT GTACTTCTGA AACCGGAGGT GTTGGCGCAG AAAACACTGG 95141 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGCCATAGTA GCCGCATGTT GTACTTCTGA AACCGGAGGT GTTGGCGCAG AAAACACTGG 540 AGGTGCCTGA CCTTGATCAG ATAACCCGCT AAGATAAGTC AGAACCTGAT TGATCATCTC 95081 |||||| ||| |||||||||| |||||||||| |||||||| | |||||||||| |||||||||| AGGTGCTTGA CCTTGATCAG ATAACCCGCT AAGATAAGCC AGAACCTGAT TGATCATCTC 600 TAGGGTAGGT TGGGGTGGCA TTTCCTCATT TTGCACTTGT TCAGTTTCTC CATCCTCCCC 95021 | |||||||| ||||||| || ||||| | |||||||||| |||||||| | |||||||||| TGGGGTAGGT TGGGGTGCCA TTTCCCTCAT TTGCACTTGT TCAGTTTCCC CATCCTCCCC 660 TTCT 95017 |||| TTCT 664 hqPGS_C10HBa0115K16.1-_SGN-E352401+ (95680 95017) ******************************************************************************** EST sequence 237 +strand 713 n (File: SGN-E349404+) 1 GGGGTTCTGT CCTCTAGAAT AAGAACCATT ATACTCTCCT CCCCTTCTAA ACCTCTTCGA 61 TGTCGATGTC GTGGTGAAGT CATCCGGTTT CACTCCTTCC ACCTCAATCA CAAAGTCTAC 121 CACCTCTTGA AAGGATGTTG CTGTTGCCGC TATCTGTAAG GCTGAAATCC GCAATTCTGA 181 TCTCAACCCC TTCACAAAAC GGCGGATCCG TTCTTGTGGA CTAAAACAGA GTTGGGTGGC 241 GTATCTGGAT AGTGCGCGAA ATTTAGCCTC ATACGCGTTT ACTGTCATCC TTCCCTGTTC 301 AAGACTCAAG AACTCATCCC TTTTCCTATC TCTCAAAGTC CTTGGGATAT ATTTCTCCAT 361 GAACAAACTA GAGAATGATT CCCAAGTCAT AGGTGGTGCC TCTGTTGGTT GACACTCAAC 421 ATGTGAACGC CACCACATCT TGGCGTTCCC TTGGAACTGA TAGCTCACGA ACTCGACGCC 481 AAACCTCTCT ACTATCCCCA TTTTGTGTAG TAGCTCATGA CAATCAACCA GAAAATCATA 541 AGCATCTTCA GATTCTGCAC CCTTGAAGAC TGGAGGTTTC AGTTTCAAGA ACTTACTGAA 601 AAGTTCATGT TGATCGTTTG TCATAATAGG CCCAGTAGTC AGACGTGGAA ATGTGCCTAT 661 TCCCAATGGT GCATCTATGC GGGGAGCCAT AGTAGCCGCA TGTCGTATCT CTG Predicted gene structure (within gDNA segment 97438 to 94004): Exon 1 95878 95172 ( 707 n); cDNA 7 713 ( 707 n); score: 0.880 MATCH C10HBa0115K16.1- SGN-E349404+ 0.880 707 0.992 C PGS_C10HBa0115K16.1-_SGN-E349404+ (95878 95172) Alignment (genomic DNA sequence = upper lines): CTGTCCTCTA GTGTAAGAAC CATTAAACTC ACCTCCCTTT CGAAGCCTTT TTGATGTCGA 95819 |||||||||| | ||||||| ||||| |||| |||||| || | || ||| | | |||||||| CTGTCCTCTA GAATAAGAAC CATTATACTC TCCTCCCCTT CTAAACCTCT TCGATGTCGA 66 TGTTGTGGTG AAGTCGCCTG GCTTCACTCC TTTCACTTCT ATCACAAAGT CTACCACCTC 95759 ||| |||||| ||||| | | | |||||||| || ||| || |||||||||| |||||||||| TGTCGTGGTG AAGTCATCCG GTTTCACTCC TTCCACCTCA ATCACAAAGT CTACCACCTC 126 TTGGAAGGAT TTTGCTGTTG CCGCTATCTG TAAGGCCGAG ATCCGCAATT CTGACCTCAA 95699 ||| |||||| ||||||||| |||||||||| |||||| || |||||||||| |||| ||||| TTGAAAGGAT GTTGCTGTTG CCGCTATCTG TAAGGCTGAA ATCCGCAATT CTGATCTCAA 186 CCCCTTCACA AACCGGCGAA TCCGCTCTTG AGGACTGAAA CAGAGTTGAG TGGCATATCT 95639 |||||||||| || ||||| | |||| ||||| ||||| ||| |||||||| | |||| ||||| CCCCTTCACA AAACGGCGGA TCCGTTCTTG TGGACTAAAA CAGAGTTGGG TGGCGTATCT 246 AGATAATGCA CGAAACTTAG CCTCATAAGC ATTAACCGAC ATCCTACCTT GCTCTAGGCT 95579 |||| ||| ||||| |||| ||||||| || || || | | ||||| || | | || || || GGATAGTGCG CGAAATTTAG CCTCATACGC GTTTACTGTC ATCCTTCCCT GTTCAAGACT 306 CAAGAACTCA TCCCTTTTCC TATCCCTCAA AGTTCGGGGG ATATACTTCT CCATAAACAA 95519 |||||||||| |||||||||| |||| ||||| ||| | ||| ||||| |||| |||| ||||| CAAGAACTCA TCCCTTTTCC TATCTCTCAA AGTCCTTGGG ATATATTTCT CCATGAACAA 366 ACTAGAGAAT GAGGCCCAAG TCATAGGTGG TGCCTCTATT GGTTGACACT CGATATGTGA 95459 |||||||||| || |||||| |||||||||| ||||||| || |||||||||| | | |||||| ACTAGAGAAT GATTCCCAAG TCATAGGTGG TGCCTCTGTT GGTTGACACT CAACATGTGA 426 CCGCCACCAC ATTTTGGCAT TCCCTTGAAA CTGATAAGTC ACAAACTCCA CACCAAACCG 95399 ||||||||| || ||||| | ||||||| || |||||| || || ||||| | | ||||||| ACGCCACCAC ATCTTGGCGT TCCCTTGGAA CTGATAGCTC ACGAACTCGA CGCCAAACCT 486 TTCTACTATA CCCATCTTGT GTAGTAGCTC GTGACAGTCA ACCAGAAAAT CATAAGCATC 95339 |||||||| ||||| |||| |||||||||| ||||| ||| |||||||||| |||||||||| CTCTACTATC CCCATTTTGT GTAGTAGCTC ATGACAATCA ACCAGAAAAT CATAAGCATC 546 CTCAGATTCC GCACCCTTGA AGACTGGAGT TTTCAATTTC AAGAACATAC TGAAAAGTTC 95279 |||||||| |||||||||| ||||||||| ||||| |||| |||||| ||| |||||||||| TTCAGATTCT GCACCCTTGA AGACTGGAGG TTTCAGTTTC AAGAACTTAC TGAAAAGTTC 606 ATGCTGATCA TTTGTCATTA TAGGCCCAGT AGTCAGACGT GGAAACGTGC CTATTTCCAA 95219 ||| ||||| |||||||| | |||||||||| |||||||||| ||||| |||| ||||| |||| ATGTTGATCG TTTGTCATAA TAGGCCCAGT AGTCAGACGT GGAAATGTGC CTATTCCCAA 666 TGGAACATCC ATGCGGGGAG CCATAGTAGC CGCATGTTGT ACTTCTG 95172 ||| |||| |||||||||| |||||||||| ||||||| || | |||| TGGTGCATCT ATGCGGGGAG CCATAGTAGC CGCATGTCGT ATCTCTG 713 hqPGS_C10HBa0115K16.1-_SGN-E349404+ (95878 95172) ******************************************************************************** EST sequence 206 +strand 679 n (File: SGN-E351625+) 1 GGGGTTCTGT CCTCTAGAAT AAGAACCATT ATACTCTCCT CCCCTTCTAA ACCTCTTCGA 61 TGTCGATGTC GTGGTGAAGT CATCCGGTTT CACTCCTTCC ACCTCAATCA CAAAGTCTAC 121 CACCTCTTGA AAGGATGTTG CTGTTGCCGC TATCTGTAAG GCTGAAATCC GCAATTCTGA 181 TCTCAACCCC TTCACAAAAC GGCGGATCCG TTCTTGTGGA CTAAAACAGA GTTGGGTGGC 241 GTATCTGGAT AGTGCGCGAA ATTTAGCCTC ATACGCGTTT ACTGTCATCC TTCCCTGTTC 301 AAGACTCAAG AACTCATCCC TTTTCCTATC TCTCAAAGTC CTTGGGATAT ATTTCTCCAT 361 GAACAAACTA GAGAATGATT CCCAAGTCAT AGGTGGTGCC TCTGTTGGTT GACACTCAAC 421 ATGTGAACGC CACCACATCT TGGCGTTCCC TTGGAACTGA TAGCTCACGA ACTCGACGCC 481 AAACCTCTCT ACTATCCCCA TTTTGTGTAG TAGCTCATGA CAATCAACCA GAAAATCATA 541 AGCATCTTCA GATTCTGCAC CCTTGAAGAC TGGAGGTTTC AGTTTCAAGA ACTTACTGAA 601 AAGTTCATGT TGATCGTTTG TCATAATAAG CCCAGTAGTC AGACGTGGAA ATGTGCCTAT 661 TCCCAATGGT GCATCTATG Predicted gene structure (within gDNA segment 97438 to 93966): Exon 1 95878 95206 ( 673 n); cDNA 7 679 ( 673 n); score: 0.877 MATCH C10HBa0115K16.1- SGN-E351625+ 0.877 673 0.991 C PGS_C10HBa0115K16.1-_SGN-E351625+ (95878 95206) Alignment (genomic DNA sequence = upper lines): CTGTCCTCTA GTGTAAGAAC CATTAAACTC ACCTCCCTTT CGAAGCCTTT TTGATGTCGA 95819 |||||||||| | ||||||| ||||| |||| |||||| || | || ||| | | |||||||| CTGTCCTCTA GAATAAGAAC CATTATACTC TCCTCCCCTT CTAAACCTCT TCGATGTCGA 66 TGTTGTGGTG AAGTCGCCTG GCTTCACTCC TTTCACTTCT ATCACAAAGT CTACCACCTC 95759 ||| |||||| ||||| | | | |||||||| || ||| || |||||||||| |||||||||| TGTCGTGGTG AAGTCATCCG GTTTCACTCC TTCCACCTCA ATCACAAAGT CTACCACCTC 126 TTGGAAGGAT TTTGCTGTTG CCGCTATCTG TAAGGCCGAG ATCCGCAATT CTGACCTCAA 95699 ||| |||||| ||||||||| |||||||||| |||||| || |||||||||| |||| ||||| TTGAAAGGAT GTTGCTGTTG CCGCTATCTG TAAGGCTGAA ATCCGCAATT CTGATCTCAA 186 CCCCTTCACA AACCGGCGAA TCCGCTCTTG AGGACTGAAA CAGAGTTGAG TGGCATATCT 95639 |||||||||| || ||||| | |||| ||||| ||||| ||| |||||||| | |||| ||||| CCCCTTCACA AAACGGCGGA TCCGTTCTTG TGGACTAAAA CAGAGTTGGG TGGCGTATCT 246 AGATAATGCA CGAAACTTAG CCTCATAAGC ATTAACCGAC ATCCTACCTT GCTCTAGGCT 95579 |||| ||| ||||| |||| ||||||| || || || | | ||||| || | | || || || GGATAGTGCG CGAAATTTAG CCTCATACGC GTTTACTGTC ATCCTTCCCT GTTCAAGACT 306 CAAGAACTCA TCCCTTTTCC TATCCCTCAA AGTTCGGGGG ATATACTTCT CCATAAACAA 95519 |||||||||| |||||||||| |||| ||||| ||| | ||| ||||| |||| |||| ||||| CAAGAACTCA TCCCTTTTCC TATCTCTCAA AGTCCTTGGG ATATATTTCT CCATGAACAA 366 ACTAGAGAAT GAGGCCCAAG TCATAGGTGG TGCCTCTATT GGTTGACACT CGATATGTGA 95459 |||||||||| || |||||| |||||||||| ||||||| || |||||||||| | | |||||| ACTAGAGAAT GATTCCCAAG TCATAGGTGG TGCCTCTGTT GGTTGACACT CAACATGTGA 426 CCGCCACCAC ATTTTGGCAT TCCCTTGAAA CTGATAAGTC ACAAACTCCA CACCAAACCG 95399 ||||||||| || ||||| | ||||||| || |||||| || || ||||| | | ||||||| ACGCCACCAC ATCTTGGCGT TCCCTTGGAA CTGATAGCTC ACGAACTCGA CGCCAAACCT 486 TTCTACTATA CCCATCTTGT GTAGTAGCTC GTGACAGTCA ACCAGAAAAT CATAAGCATC 95339 |||||||| ||||| |||| |||||||||| ||||| ||| |||||||||| |||||||||| CTCTACTATC CCCATTTTGT GTAGTAGCTC ATGACAATCA ACCAGAAAAT CATAAGCATC 546 CTCAGATTCC GCACCCTTGA AGACTGGAGT TTTCAATTTC AAGAACATAC TGAAAAGTTC 95279 |||||||| |||||||||| ||||||||| ||||| |||| |||||| ||| |||||||||| TTCAGATTCT GCACCCTTGA AGACTGGAGG TTTCAGTTTC AAGAACTTAC TGAAAAGTTC 606 ATGCTGATCA TTTGTCATTA TAGGCCCAGT AGTCAGACGT GGAAACGTGC CTATTTCCAA 95219 ||| ||||| |||||||| | || ||||||| |||||||||| ||||| |||| ||||| |||| ATGTTGATCG TTTGTCATAA TAAGCCCAGT AGTCAGACGT GGAAATGTGC CTATTCCCAA 666 TGGAACATCC ATG 95206 ||| |||| ||| TGGTGCATCT ATG 679 hqPGS_C10HBa0115K16.1-_SGN-E351625+ (95878 95206) ******************************************************************************** EST sequence 253 +strand 612 n (File: SGN-E357065+) 1 GGGTTCTGTC CTCTAGAATA AGAACCATTA TACTCTCCTC CCCTTCTAAA CCTCTTCGAT 61 GTCGATGTCG TGGTGAAGTC ATCCGGTTTC ACTCCTTCCA CCTCAATCAC AAAGTCTACC 121 ACCTCTTGAA AGGATGTTGC TGTTGCCGCT ATCTGTAAGG CTGAAATCCG CAATTCTGAT 181 CTCAACCCCT TCACAAAACG GCGGATCCGT TCTTGTGGAC TAAAACAGAG TTGGGTGGCG 241 TATCTGGATA GTGCGCGAAA TTTAGCCTCA TACGCGTTTA CTGTCATCCT TCCCTGTTCA 301 AGACTCAAGA ACTCATCCCT TTTCCTATCT CTCAAAGTCC TTGGGATATA TTTCTCCATG 361 AACAAACTAG AGAATGATTC CCAAGTCATA GGTGGTGCCT CTGTTGGTTG ACACTCAACA 421 TGTGAACGCC ACCACATCTT GGCGTTCCCT TGGAACTGAT AGCTCACGAA CTCGACGCCA 481 AACCTCTCTA CTATCCCCAT TTTGTGTAGT AGCTCATGAC AATCAACCAG AAAATCATAA 541 GCATCTTCAG ATTCTGCACC CTTGAAGACT GGAGGTTTCA GTTTCAAGAA CTTACTGAAA 601 AGTCATGTTG AT Predicted gene structure (within gDNA segment 97428 to 94320): Exon 1 95878 95271 ( 608 n); cDNA 6 612 ( 607 n); score: 0.875 MATCH C10HBa0115K16.1- SGN-E357065+ 0.875 608 0.993 C PGS_C10HBa0115K16.1-_SGN-E357065+ (95878 95271) Alignment (genomic DNA sequence = upper lines): CTGTCCTCTA GTGTAAGAAC CATTAAACTC ACCTCCCTTT CGAAGCCTTT TTGATGTCGA 95819 |||||||||| | ||||||| ||||| |||| |||||| || | || ||| | | |||||||| CTGTCCTCTA GAATAAGAAC CATTATACTC TCCTCCCCTT CTAAACCTCT TCGATGTCGA 65 TGTTGTGGTG AAGTCGCCTG GCTTCACTCC TTTCACTTCT ATCACAAAGT CTACCACCTC 95759 ||| |||||| ||||| | | | |||||||| || ||| || |||||||||| |||||||||| TGTCGTGGTG AAGTCATCCG GTTTCACTCC TTCCACCTCA ATCACAAAGT CTACCACCTC 125 TTGGAAGGAT TTTGCTGTTG CCGCTATCTG TAAGGCCGAG ATCCGCAATT CTGACCTCAA 95699 ||| |||||| ||||||||| |||||||||| |||||| || |||||||||| |||| ||||| TTGAAAGGAT GTTGCTGTTG CCGCTATCTG TAAGGCTGAA ATCCGCAATT CTGATCTCAA 185 CCCCTTCACA AACCGGCGAA TCCGCTCTTG AGGACTGAAA CAGAGTTGAG TGGCATATCT 95639 |||||||||| || ||||| | |||| ||||| ||||| ||| |||||||| | |||| ||||| CCCCTTCACA AAACGGCGGA TCCGTTCTTG TGGACTAAAA CAGAGTTGGG TGGCGTATCT 245 AGATAATGCA CGAAACTTAG CCTCATAAGC ATTAACCGAC ATCCTACCTT GCTCTAGGCT 95579 |||| ||| ||||| |||| ||||||| || || || | | ||||| || | | || || || GGATAGTGCG CGAAATTTAG CCTCATACGC GTTTACTGTC ATCCTTCCCT GTTCAAGACT 305 CAAGAACTCA TCCCTTTTCC TATCCCTCAA AGTTCGGGGG ATATACTTCT CCATAAACAA 95519 |||||||||| |||||||||| |||| ||||| ||| | ||| ||||| |||| |||| ||||| CAAGAACTCA TCCCTTTTCC TATCTCTCAA AGTCCTTGGG ATATATTTCT CCATGAACAA 365 ACTAGAGAAT GAGGCCCAAG TCATAGGTGG TGCCTCTATT GGTTGACACT CGATATGTGA 95459 |||||||||| || |||||| |||||||||| ||||||| || |||||||||| | | |||||| ACTAGAGAAT GATTCCCAAG TCATAGGTGG TGCCTCTGTT GGTTGACACT CAACATGTGA 425 CCGCCACCAC ATTTTGGCAT TCCCTTGAAA CTGATAAGTC ACAAACTCCA CACCAAACCG 95399 ||||||||| || ||||| | ||||||| || |||||| || || ||||| | | ||||||| ACGCCACCAC ATCTTGGCGT TCCCTTGGAA CTGATAGCTC ACGAACTCGA CGCCAAACCT 485 TTCTACTATA CCCATCTTGT GTAGTAGCTC GTGACAGTCA ACCAGAAAAT CATAAGCATC 95339 |||||||| ||||| |||| |||||||||| ||||| ||| |||||||||| |||||||||| CTCTACTATC CCCATTTTGT GTAGTAGCTC ATGACAATCA ACCAGAAAAT CATAAGCATC 545 CTCAGATTCC GCACCCTTGA AGACTGGAGT TTTCAATTTC AAGAACATAC TGAAAAGTTC 95279 |||||||| |||||||||| ||||||||| ||||| |||| |||||| ||| ||||||| || TTCAGATTCT GCACCCTTGA AGACTGGAGG TTTCAGTTTC AAGAACTTAC TGAAAAG-TC 604 ATGCTGAT 95271 ||| |||| ATGTTGAT 612 hqPGS_C10HBa0115K16.1-_SGN-E357065+ (95878 95271) ******************************************************************************** EST sequence 152 +strand 524 n (File: SGN-E352365+) 1 GGGGTTCTGT CCTCTAGAAT AAGAACCATT ATACTCTCCT CCCCTTCTAA ACCTCTTCGA 61 TGTCGATGTC GTGGTGAAGT CATCCGGTTT CACTCCTTCC ACCTCAATCA CAAAGTCTAC 121 CACCTCTTGA AAGGATGTTG CTGTTGCCGC TATCTGTAAG GCTGAAATCC GCAATTCTGA 181 TCTCAACCCC TTCACAAAAC GGCGGATCCG TTCTTGTGGA CTAAAACAGA GTTGGGTGGC 241 GTATCTGGAT AGTGCGCGAA ATTTAGCCTC ATACGCGTTT ACTGTCATCC TTCCCTGTTC 301 AAGACTCAAG AACTCATCCC TTTTCCTATC TCTCAAAGTC CTTGGGATAT ATTTCTCCAT 361 GAACAAACTA GAGAATGATT CCCAAGTCAT AGGTGGTGCC TCTGTTGGTT GACACTCAAC 421 ATGTGAACGC CACCACATCT TGGCGTTCCC TTGGAACTGA TAGCTCACGA ACTCGACGCC 481 AAACCTCTCT ACTATCCCCA TTTTGTGTAG TAGCTCATGA CAAT Predicted gene structure (within gDNA segment 97438 to 93662): Exon 1 95878 95363 ( 516 n); cDNA 7 522 ( 516 n); score: 0.868 MATCH C10HBa0115K16.1- SGN-E352365+ 0.868 516 0.985 C PGS_C10HBa0115K16.1-_SGN-E352365+ (95878 95363) Alignment (genomic DNA sequence = upper lines): CTGTCCTCTA GTGTAAGAAC CATTAAACTC ACCTCCCTTT CGAAGCCTTT TTGATGTCGA 95819 |||||||||| | ||||||| ||||| |||| |||||| || | || ||| | | |||||||| CTGTCCTCTA GAATAAGAAC CATTATACTC TCCTCCCCTT CTAAACCTCT TCGATGTCGA 66 TGTTGTGGTG AAGTCGCCTG GCTTCACTCC TTTCACTTCT ATCACAAAGT CTACCACCTC 95759 ||| |||||| ||||| | | | |||||||| || ||| || |||||||||| |||||||||| TGTCGTGGTG AAGTCATCCG GTTTCACTCC TTCCACCTCA ATCACAAAGT CTACCACCTC 126 TTGGAAGGAT TTTGCTGTTG CCGCTATCTG TAAGGCCGAG ATCCGCAATT CTGACCTCAA 95699 ||| |||||| ||||||||| |||||||||| |||||| || |||||||||| |||| ||||| TTGAAAGGAT GTTGCTGTTG CCGCTATCTG TAAGGCTGAA ATCCGCAATT CTGATCTCAA 186 CCCCTTCACA AACCGGCGAA TCCGCTCTTG AGGACTGAAA CAGAGTTGAG TGGCATATCT 95639 |||||||||| || ||||| | |||| ||||| ||||| ||| |||||||| | |||| ||||| CCCCTTCACA AAACGGCGGA TCCGTTCTTG TGGACTAAAA CAGAGTTGGG TGGCGTATCT 246 AGATAATGCA CGAAACTTAG CCTCATAAGC ATTAACCGAC ATCCTACCTT GCTCTAGGCT 95579 |||| ||| ||||| |||| ||||||| || || || | | ||||| || | | || || || GGATAGTGCG CGAAATTTAG CCTCATACGC GTTTACTGTC ATCCTTCCCT GTTCAAGACT 306 CAAGAACTCA TCCCTTTTCC TATCCCTCAA AGTTCGGGGG ATATACTTCT CCATAAACAA 95519 |||||||||| |||||||||| |||| ||||| ||| | ||| ||||| |||| |||| ||||| CAAGAACTCA TCCCTTTTCC TATCTCTCAA AGTCCTTGGG ATATATTTCT CCATGAACAA 366 ACTAGAGAAT GAGGCCCAAG TCATAGGTGG TGCCTCTATT GGTTGACACT CGATATGTGA 95459 |||||||||| || |||||| |||||||||| ||||||| || |||||||||| | | |||||| ACTAGAGAAT GATTCCCAAG TCATAGGTGG TGCCTCTGTT GGTTGACACT CAACATGTGA 426 CCGCCACCAC ATTTTGGCAT TCCCTTGAAA CTGATAAGTC ACAAACTCCA CACCAAACCG 95399 ||||||||| || ||||| | ||||||| || |||||| || || ||||| | | ||||||| ACGCCACCAC ATCTTGGCGT TCCCTTGGAA CTGATAGCTC ACGAACTCGA CGCCAAACCT 486 TTCTACTATA CCCATCTTGT GTAGTAGCTC GTGACA 95363 |||||||| ||||| |||| |||||||||| ||||| CTCTACTATC CCCATTTTGT GTAGTAGCTC ATGACA 522 hqPGS_C10HBa0115K16.1-_SGN-E352365+ (95878 95363) ******************************************************************************** EST sequence 252 +strand 790 n (File: SGN-E356912+) 1 CAGGATCAAA CAATACGGAA GCCATGCAAT CACAAACTAG AAGATTACCT GTGATGACAG 61 CATCAGATGC CTCCGCTTCA GACCGCCCAG GGAAAGCGTA ACAATGGGCC CTATCGTTTG 121 TCTGCCCATT GCCCCTACCA TGTTGTGATG TAGTGGCCCC AGTTTGCCCA TTACCTCTGC 181 CGTTTTGGTG ACCACCATTA CCTCGACCAC CACGTCCTCC AGAATAACGG CCTCTACCAT 241 GACCACCTCT ACCTCTAGCT ATTGGGGGTC TATAACTTGG TCCAGGACAA TTTATCCTAA 301 TATGTCCAAT CTCCCCACAT CCATAACATT CTCTGGAGTC ACTCATAGGC CCCTTGGAGA 361 AGTGTTGACC GGTCTGAGGT GGACCCCCAA CTACAGTCTG TAGTGAAGAC TGAATGGGTC 421 GAGCCGAGTA ACCTCCGGAA CCTTGTCCTC TAGAGTAAGA ACCCTTAAAC TCACCTCCCT 481 TTCGAAACCT CTTTGATGTT GATGTCGTGG TGAAGTCGTC TGGCTTCACT CCTTCCACTT 541 CTATCACAAA GTCTACCACT TCTTGGAAGG ATTTTGCCGT TGCCGCTACC TGTAAGGCCG 601 AAATCCGCAA TTCTGACCTC AACCCCTTCA CAAACCGGAG AATCCGCTCT TGAGGACTGA 661 AACAGAGTTG AGTGGCATAT CCGGATAGTG CACGGAACTT AGCCTCATAA GCATTAACCG 721 ACATCCTACC TTGCTCTAGG CTCAGGAACT CATCTCTTTT CCTATCCCTC AAAGTCCGGG 781 GGATATACTT Predicted gene structure (within gDNA segment 97262 to 94786): Exon 1 96320 95531 ( 790 n); cDNA 3 790 ( 788 n); score: 0.929 MATCH C10HBa0115K16.1- SGN-E356912+ 0.929 790 1.000 C PGS_C10HBa0115K16.1-_SGN-E356912+ (96320 95531) Alignment (genomic DNA sequence = upper lines): GGTTCAAGAT CAATACAGAA GTCATGCAAT CACAAACCAG AAGATTACCT GTGATGACAG 96261 || |||| | |||||| ||| | |||||||| ||||||| || |||||||||| |||||||||| GGATCAA-A- CAATACGGAA GCCATGCAAT CACAAACTAG AAGATTACCT GTGATGACAG 60 CATCAGATGC TTCCGGTTCA GACCGCCCAG GGAAAGCGTA ACAATGGTCC CTATCGTTCG 96201 |||||||||| |||| |||| |||||||||| |||||||||| ||||||| || |||||||| | CATCAGATGC CTCCGCTTCA GACCGCCCAG GGAAAGCGTA ACAATGGGCC CTATCGTTTG 120 TCTGTCCGTT GCCCCTACCA TGTTGTGATG TAGTGGCCCC ATTTTGCCCA TTACCTCTGC 96141 |||| || || |||||||||| |||||||||| |||||||||| | |||||||| |||||||||| TCTGCCCATT GCCCCTACCA TGTTGTGATG TAGTGGCCCC AGTTTGCCCA TTACCTCTGC 180 CGTTTTGGTG ACCACTATTA CCTCGACCAC CACGCCCTCC AGAAAAACGG CCTCTATCAT 96081 |||||||||| ||||| |||| |||||||||| |||| ||||| |||| ||||| |||||| ||| CGTTTTGGTG ACCACCATTA CCTCGACCAC CACGTCCTCC AGAATAACGG CCTCTACCAT 240 GACCACCTCT ACCTCTAGTT ATTGGGGGTC TGTAACTTGG TCTGGGACAA TTTCTCCTAA 96021 |||||||||| |||||||| | |||||||||| | |||||||| || |||||| ||| |||||| GACCACCTCT ACCTCTAGCT ATTGGGGGTC TATAACTTGG TCCAGGACAA TTTATCCTAA 300 TATGTCCAAT CTCCCCACAT CCATAACATT CTTTGGAGTC GATCATATGC CCCTCGGAGA 95961 |||||||||| |||||||||| |||||||||| || ||||||| ||||| || |||| ||||| TATGTCCAAT CTCCCCACAT CCATAACATT CTCTGGAGTC ACTCATAGGC CCCTTGGAGA 360 AGTGTTGACC GGTCTGAGGT GGTCCCCCAA CTACAGTCTG TAGAGAAGAC TGAATTGGTC 95901 |||||||||| |||||||||| || ||||||| |||||||||| ||| |||||| ||||| |||| AGTGTTGACC GGTCTGAGGT GGACCCCCAA CTACAGTCTG TAGTGAAGAC TGAATGGGTC 420 GGACTGAGTA ACTTCCCGAA CCCTGTCCTC TAGTGTAAGA ACCATTAAAC TCACCTCCCT 95841 | | ||||| || ||| ||| || ||||||| ||| |||||| ||| |||||| |||||||||| GAGCCGAGTA ACCTCCGGAA CCTTGTCCTC TAGAGTAAGA ACCCTTAAAC TCACCTCCCT 480 TTCGAAGCCT TTTTGATGTC GATGTTGTGG TGAAGTCGCC TGGCTTCACT CCTTTCACTT 95781 |||||| ||| |||||||| ||||| |||| |||||||| | |||||||||| |||| ||||| TTCGAAACCT CTTTGATGTT GATGTCGTGG TGAAGTCGTC TGGCTTCACT CCTTCCACTT 540 CTATCACAAA GTCTACCACC TCTTGGAAGG ATTTTGCTGT TGCCGCTATC TGTAAGGCCG 95721 |||||||||| ||||||||| |||||||||| ||||||| || |||||||| | |||||||||| CTATCACAAA GTCTACCACT TCTTGGAAGG ATTTTGCCGT TGCCGCTACC TGTAAGGCCG 600 AGATCCGCAA TTCTGACCTC AACCCCTTCA CAAACCGGCG AATCCGCTCT TGAGGACTGA 95661 | |||||||| |||||||||| |||||||||| |||||||| | |||||||||| |||||||||| AAATCCGCAA TTCTGACCTC AACCCCTTCA CAAACCGGAG AATCCGCTCT TGAGGACTGA 660 AACAGAGTTG AGTGGCATAT CTAGATAATG CACGAAACTT AGCCTCATAA GCATTAACCG 95601 |||||||||| |||||||||| | |||| || |||| ||||| |||||||||| |||||||||| AACAGAGTTG AGTGGCATAT CCGGATAGTG CACGGAACTT AGCCTCATAA GCATTAACCG 720 ACATCCTACC TTGCTCTAGG CTCAAGAACT CATCCCTTTT CCTATCCCTC AAAGTTCGGG 95541 |||||||||| |||||||||| |||| ||||| |||| ||||| |||||||||| ||||| |||| ACATCCTACC TTGCTCTAGG CTCAGGAACT CATCTCTTTT CCTATCCCTC AAAGTCCGGG 780 GGATATACTT 95531 |||||||||| GGATATACTT 790 hqPGS_C10HBa0115K16.1-_SGN-E356912+ (96320 95531) ******************************************************************************** EST sequence 239 +strand 698 n (File: SGN-E356209+) 1 TTCAGACCGC CCAGGGAAAG CGTAACAATG GGCCCTATCG TTCGTCTGTC CGTTGCCCCT 61 ACCATGTTGT GATGTAGTGG CCCCAGTTTG CCCATTACCT CTGCCATTTT GGTGACCACC 121 ATTACCTCGA CCACCACGTC CTCCAGAATA ACGGCCTCTA CCATGACCAC CTCTACCTCT 181 AGCTATTGGG GGTCTATAAC TTTGTCTGGG ACAATTTTTC CTAATATGTC CAATCTCCCC 241 ACATCCATAA CATTCTCTGG AGTCAAGCAT AGGCCCCTCG GAGAAGTGTT AACCGGTCTG 301 AGGTGGTCTC CCAACTACAG TCTGTAGTGA AGACTGAATT GGTCGGACTG AGTAACTTCC 361 CGAACCCTGT CCTCTAGTGT AAGAACCATT AAACTCACCT CCCTTCCGAA ACCTTTTTGA 421 TGTCGATGTT GTGGTGAAGT CGTCTGGCTT CACTCCTTCC ACTTCTATCA CAAAGTCTAC 481 CACTTCTTGG AAGGATTTTG CCGTTGCCGC TATCTGTAAG GACGAAATCC GCAATTCTGA 541 CCTCAACCCC TTCACAAACC GGCGAATCCG CTCTTGAGGA CTGAAACAGA GTTGAGTGGC 601 ATATCTGGAT AGTGCACGAA ACTTAGCCTC ATAAGCATTA ACCGACATCC TACCTTGCTC 661 TAGGCTCAAG AACTCATCCC TTTTCCTATC CCTCAAAG Predicted gene structure (within gDNA segment 96844 to 94937): Exon 1 96244 95547 ( 698 n); cDNA 1 698 ( 698 n); score: 0.960 MATCH C10HBa0115K16.1- SGN-E356209+ 0.960 698 1.000 C PGS_C10HBa0115K16.1-_SGN-E356209+ (96244 95547) Alignment (genomic DNA sequence = upper lines): TTCAGACCGC CCAGGGAAAG CGTAACAATG GTCCCTATCG TTCGTCTGTC CGTTGCCCCT 96185 |||||||||| |||||||||| |||||||||| | |||||||| |||||||||| |||||||||| TTCAGACCGC CCAGGGAAAG CGTAACAATG GGCCCTATCG TTCGTCTGTC CGTTGCCCCT 60 ACCATGTTGT GATGTAGTGG CCCCATTTTG CCCATTACCT CTGCCGTTTT GGTGACCACT 96125 |||||||||| |||||||||| ||||| |||| |||||||||| ||||| |||| ||||||||| ACCATGTTGT GATGTAGTGG CCCCAGTTTG CCCATTACCT CTGCCATTTT GGTGACCACC 120 ATTACCTCGA CCACCACGCC CTCCAGAAAA ACGGCCTCTA TCATGACCAC CTCTACCTCT 96065 |||||||||| |||||||| | |||||||| | |||||||||| ||||||||| |||||||||| ATTACCTCGA CCACCACGTC CTCCAGAATA ACGGCCTCTA CCATGACCAC CTCTACCTCT 180 AGTTATTGGG GGTCTGTAAC TTGGTCTGGG ACAATTTCTC CTAATATGTC CAATCTCCCC 96005 || ||||||| ||||| |||| || ||||||| ||||||| || |||||||||| |||||||||| AGCTATTGGG GGTCTATAAC TTTGTCTGGG ACAATTTTTC CTAATATGTC CAATCTCCCC 240 ACATCCATAA CATTCTTTGG AGTCGATCAT ATGCCCCTCG GAGAAGTGTT GACCGGTCTG 95945 |||||||||| |||||| ||| |||| | ||| | |||||||| |||||||||| ||||||||| ACATCCATAA CATTCTCTGG AGTCAAGCAT AGGCCCCTCG GAGAAGTGTT AACCGGTCTG 300 AGGTGGTCCC CCAACTACAG TCTGTAGAGA AGACTGAATT GGTCGGACTG AGTAACTTCC 95885 |||||||| | |||||||||| ||||||| || |||||||||| |||||||||| |||||||||| AGGTGGTCTC CCAACTACAG TCTGTAGTGA AGACTGAATT GGTCGGACTG AGTAACTTCC 360 CGAACCCTGT CCTCTAGTGT AAGAACCATT AAACTCACCT CCCTTTCGAA GCCTTTTTGA 95825 |||||||||| |||||||||| |||||||||| |||||||||| ||||| |||| ||||||||| CGAACCCTGT CCTCTAGTGT AAGAACCATT AAACTCACCT CCCTTCCGAA ACCTTTTTGA 420 TGTCGATGTT GTGGTGAAGT CGCCTGGCTT CACTCCTTTC ACTTCTATCA CAAAGTCTAC 95765 |||||||||| |||||||||| || ||||||| |||||||| | |||||||||| |||||||||| TGTCGATGTT GTGGTGAAGT CGTCTGGCTT CACTCCTTCC ACTTCTATCA CAAAGTCTAC 480 CACCTCTTGG AAGGATTTTG CTGTTGCCGC TATCTGTAAG GCCGAGATCC GCAATTCTGA 95705 ||| |||||| |||||||||| | |||||||| |||||||||| | ||| |||| |||||||||| CACTTCTTGG AAGGATTTTG CCGTTGCCGC TATCTGTAAG GACGAAATCC GCAATTCTGA 540 CCTCAACCCC TTCACAAACC GGCGAATCCG CTCTTGAGGA CTGAAACAGA GTTGAGTGGC 95645 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCTCAACCCC TTCACAAACC GGCGAATCCG CTCTTGAGGA CTGAAACAGA GTTGAGTGGC 600 ATATCTAGAT AATGCACGAA ACTTAGCCTC ATAAGCATTA ACCGACATCC TACCTTGCTC 95585 |||||| ||| | |||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATATCTGGAT AGTGCACGAA ACTTAGCCTC ATAAGCATTA ACCGACATCC TACCTTGCTC 660 TAGGCTCAAG AACTCATCCC TTTTCCTATC CCTCAAAG 95547 |||||||||| |||||||||| |||||||||| |||||||| TAGGCTCAAG AACTCATCCC TTTTCCTATC CCTCAAAG 698 hqPGS_C10HBa0115K16.1-_SGN-E356209+ (96244 95547) ******************************************************************************** EST sequence 223 +strand 694 n (File: SGN-E353359+) 1 TGTAGTCTAT GCACATTCAA AAACTGCCGA TCTTTACAAC AAAACCGGAG CACCCCAAGG 61 AGATGCACTT GGTCTAATGA AGCCTTTGTT CAATAACTCT TGAAGTTGTG CCTTTAACTC 121 TCTTAACTCT GCGGGAGCCA TTCTATAAGG GGGTATAAAA ATGGGGCGTG TGCCCGGTTC 181 GAGATCAATA CAGAAGTCAA TATCCCTATC CGGTGGCATA CCAGGATGAT CTGCAGGGAA 241 CACATCCATA AACTCACGAA CTACTGAAAC TGAGTCAATC GAAGGTACTT GGGTAGTGTT 301 ATCCTTGAGA TGTGCCAAGA AAGCTAAACA CCCTTTACTA ACCATTTTCT TAGCACGAAG 361 AAAGGAGATG ATACGCACCG GATTGGAAGT GTAGTCACCC TCCTACACTA ACAGATCTGT 421 CCCAGGCTTG GCTAACGTCA CGGTTTTAGC ATTACAATCC AAGATTGCAA AATTTGGAGA 481 AAGCCAAGTC ATACCCAGAA TTACATCGAA GTCAACCATT TCTTGCAAGG ATTTTGCCGT 541 AGCCGCTACC TGTAACGCTG AAATCCGCAA CTCTGACCTC AACCCTTTCA CAAAACGACG 601 AATCCTCTCT TGTGGACTGA AACAAAGTTG AGTGGCATAT CTGGATAGTG CACGAAACTT 661 AGCCTCATAT GCATTGACCT ACATCCTACC TTGC Predicted gene structure (within gDNA segment 97509 to 94752): Exon 1 96458 95977 ( 482 n); cDNA 38 507 ( 470 n); score: 0.604 Intron 1 95976 95774 ( 203 n); Pd: 0.000 (s: 0.50), Pa: 0.000 (s: 0.82) Exon 2 95773 95587 ( 187 n); cDNA 508 694 ( 187 n); score: 0.877 MATCH C10HBa0115K16.1- SGN-E353359+ 0.680 669 0.964 C PGS_C10HBa0115K16.1-_SGN-E353359+ (96458 95977,95773 95587) Alignment (genomic DNA sequence = upper lines): AACAAAACTG GAGCACCCCA AGGAGATGCA CTTGGTCTAA TGAAGCCTTT GTTCAATAAC 96399 |||||||| | |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AACAAAACCG GAGCACCCCA AGGAGATGCA CTTGGTCTAA TGAAGCCTTT GTTCAATAAC 97 TCTTGAAGTT GTGCTTTTAA CTCTCTTAAC TCCGCGGGAG CCATTCTATA AGGGGGTATA 96339 |||||||||| |||| ||||| |||||||||| || ||||||| |||||||||| |||||||||| TCTTGAAGTT GTGCCTTTAA CTCTCTTAAC TCTGCGGGAG CCATTCTATA AGGGGGTATA 157 GAAATGGGGT GAGTACCGGG TTCAAGATCA ATACAGAAGT CATGCAATCA CAAACCAGAA 96279 |||||||| | || || || ||| |||||| |||||||||| || ||| | | || | AAAATGGGGC GTGTGCCCGG TTCGAGATCA ATACAGAAGT CA--ATATCC CTATCCGGTG 215 GATTACCTGT GATGA-CAGC ATCAGATGCT TCC-GGTTCA GACCGCCCAG GGAAAGCGTA 96221 | |||| | ||||| | || | | | ||| | || | | |||| | GCATACCAG- GATGATCTGC AGGGAACACA TCCATAAACT CACGAACTAC TGAAACTGAG 274 ACAATGGTCC CTATCGTTCG TCTGTCCGTT GCCCCTACCA TGTTGTGATG TAGTGGCCCC 96161 |||| | || | || | || ||| || | | || || | | | | TCAATCGAAG GTA-C-TTGG GTAGT--GTT ATCCTTGAGA TG-TGCCAAG AAAGCTAAAC 329 ATTTTGCCCA TTACCTCTGC CGTTTTGGTG ACCACTATTA CCTCGACCAC CACGCCCT-C 96102 | | | | ||| | | || | | | | | | | | || | ACCCTTTAC- TAACCATTTT C-TTAGCACG AAGA-AAGGA GATGATACGC ACCGGATTGG 386 CAG-AAAAAC GGCCTCTATC ATGACCACCT CTACCTCTAG TTATTGGGGG TCTGTAACTT 96043 || | | |||| | | | || | || | | || |||| | || || AAGTGTAGTC ACCCTCCTAC ACTAACAGAT CTGTC-CCAG -GCTTGGCTA AC-GTCAC-G 442 GGTCTGGGAC AATTTCTCCT AATATGTCCA ATCTCCCCAC ATCCATAACA TTCTTTGGAG 95983 | | | | | | ||| | || | || | | | ||| || | | | | GTTTTAGCAT TA-CAATCCA AGATTGCAAA ATTTGGAGAA AGCCAAGTCA TACCCAGAAT 501 TCGATCATAT GCCCCTCGGA GAAGTGTTGA CCGGTCTGAG GTGGTCCCCC AACTACAGTC 95923 | ||| TACATC.... .......... .......... .......... .......... .......... 507 TGTAGAGAAG ACTGAATTGG TCGGACTGAG TAACTTCCCG AACCCTGTCC TCTAGTGTAA 95863 .......... .......... .......... .......... .......... .......... 507 GAACCATTAA ACTCACCTCC CTTTCGAAGC CTTTTTGATG TCGATGTTGT GGTGAAGTCG 95803 .......... .......... .......... .......... .......... .......... 507 CCTGGCTTCA CTCCTTTCAC TTCTATCACA AAGTCTACCA CCTCTTGGAA GGATTTTGCT 95743 ||||| |||| ||||| || ||||||||| .......... .......... .........G AAGTCAACCA TTTCTTGCAA GGATTTTGCC 538 GTTGCCGCTA TCTGTAAGGC CGAGATCCGC AATTCTGACC TCAACCCCTT CACAAACCGG 95683 || ||||||| |||||| || || |||||| || ||||||| ||||||| || |||||| || GTAGCCGCTA CCTGTAACGC TGAAATCCGC AACTCTGACC TCAACCCTTT CACAAAACGA 598 CGAATCCGCT CTTGAGGACT GAAACAGAGT TGAGTGGCAT ATCTAGATAA TGCACGAAAC 95623 ||||||| || |||| ||||| |||||| ||| |||||||||| |||| |||| |||||||||| CGAATCCTCT CTTGTGGACT GAAACAAAGT TGAGTGGCAT ATCTGGATAG TGCACGAAAC 658 TTAGCCTCAT AAGCATTAAC CGACATCCTA CCTTGC 95587 |||||||||| | ||||| || | |||||||| |||||| TTAGCCTCAT ATGCATTGAC CTACATCCTA CCTTGC 694 hqPGS_C10HBa0115K16.1-_SGN-E353359+ (95773 95587) ******************************************************************************** EST sequence 197 +strand 763 n (File: SGN-E214046+) 1 ACGAATAGGC ATATCAAGAA ATTCACAATG TAAATTTAGA CCATTAGCAA ATGAGGAAGA 61 TACATAAGAA AACGTGGATC CAGGATCAAA CAATACGGAA GCCATGCAAT CACAAACAAG 121 AAGATTACCT GTGATGACAG CATCAGATGC CTCCGCTTTA GACCGCCCAG GGAAAGCGTA 181 ACAATGGGCC CTATAGTTTG TTTGTCCATT GCCCCTACCA TGTCGTGATG TAGTGGCCCC 241 AGTTTGTCCA TTACCTCTGC CGTTTTGGTG ACCACCATTG CCTCGACCAC CACGTCCTCC 301 AAAATAACGG CCTCTACCAT GACAACCTCT ACCTCTAACT ATTGGGGGTC TATAACTTGG 361 TCCGGGAAAA TTTCTCCTAA TATGTCCAAT CTCCCCACAT CCATAACATT CTCTAGAGTC 421 ACTCATAGGC CCCTCGGAGA AGTGTTGACC GGTCTGAGGT GGACCCCCAA CTACAGTTTG 481 TAGTGAAGAC TGAATGGGTC GAACTGAGTA ACCTCCAGAA CCTTGTCCTC TAGAGTAAGA 541 ACCCTTAAAC TCATCTCCCC TTTGAAACCT CATCGATGTC GATGTCGTGG TGAAGTCGTC 601 TGGTTTCACT CCTTCCACTT CTATCAAAAA GTCTACCACT TCTTGGAAGG ATTTTGCCGT 661 TGCCGCTACC TGTAAGGGCG AAATCCGCAA TTCTGACCTC AACCCCTTCA CAACCGGCGA 721 ATCCGCTCTT GAGGGACTGA ACAGAGTTGA GTGGCATATC TGG Predicted gene structure (within gDNA segment 98062 to 95009): Exon 1 96320 95639 ( 682 n); cDNA 83 761 ( 679 n); score: 0.904 MATCH C10HBa0115K16.1- SGN-E214046+ 0.904 682 0.894 C PGS_C10HBa0115K16.1-_SGN-E214046+ (96320 95639) Alignment (genomic DNA sequence = upper lines): GGTTCAAGAT CAATACAGAA GTCATGCAAT CACAAACCAG AAGATTACCT GTGATGACAG 96261 || |||| | |||||| ||| | |||||||| ||||||| || |||||||||| |||||||||| GGATCAA-A- CAATACGGAA GCCATGCAAT CACAAACAAG AAGATTACCT GTGATGACAG 140 CATCAGATGC TTCCGGTTCA GACCGCCCAG GGAAAGCGTA ACAATGGTCC CTATCGTTCG 96201 |||||||||| |||| || | |||||||||| |||||||||| ||||||| || |||| ||| | CATCAGATGC CTCCGCTTTA GACCGCCCAG GGAAAGCGTA ACAATGGGCC CTATAGTTTG 200 TCTGTCCGTT GCCCCTACCA TGTTGTGATG TAGTGGCCCC ATTTTGCCCA TTACCTCTGC 96141 | ||||| || |||||||||| ||| |||||| |||||||||| | |||| ||| |||||||||| TTTGTCCATT GCCCCTACCA TGTCGTGATG TAGTGGCCCC AGTTTGTCCA TTACCTCTGC 260 CGTTTTGGTG ACCACTATTA CCTCGACCAC CACGCCCTCC AGAAAAACGG CCTCTATCAT 96081 |||||||||| ||||| ||| |||||||||| |||| ||||| | || ||||| |||||| ||| CGTTTTGGTG ACCACCATTG CCTCGACCAC CACGTCCTCC AAAATAACGG CCTCTACCAT 320 GACCACCTCT ACCTCTAGTT ATTGGGGGTC TGTAACTTGG TCTGGGACAA TTTCTCCTAA 96021 ||| |||||| ||||||| | |||||||||| | |||||||| || |||| || |||||||||| GACAACCTCT ACCTCTAACT ATTGGGGGTC TATAACTTGG TCCGGGAAAA TTTCTCCTAA 380 TATGTCCAAT CTCCCCACAT CCATAACATT CTTTGGAGTC GATCATATGC CCCTCGGAGA 95961 |||||||||| |||||||||| |||||||||| || | ||||| ||||| || |||||||||| TATGTCCAAT CTCCCCACAT CCATAACATT CTCTAGAGTC ACTCATAGGC CCCTCGGAGA 440 AGTGTTGACC GGTCTGAGGT GGTCCCCCAA CTACAGTCTG TAGAGAAGAC TGAATTGGTC 95901 |||||||||| |||||||||| || ||||||| ||||||| || ||| |||||| ||||| |||| AGTGTTGACC GGTCTGAGGT GGACCCCCAA CTACAGTTTG TAGTGAAGAC TGAATGGGTC 500 GGACTGAGTA ACTTCCCGAA CCCTGTCCTC TAGTGTAAGA ACCATTAAAC TCACCTCCCT 95841 | |||||||| || ||| ||| || ||||||| ||| |||||| ||| |||||| ||| ||||| GAACTGAGTA ACCTCCAGAA CCTTGTCCTC TAGAGTAAGA ACCCTTAAAC TCATCTCCCC 560 TTCGAAGCCT TTTTGATGTC GATGTTGTGG TGAAGTCGCC TGGCTTCACT CCTTTCACTT 95781 || ||| ||| | |||||| ||||| |||| |||||||| | ||| |||||| |||| ||||| TTTGAAACCT CATCGATGTC GATGTCGTGG TGAAGTCGTC TGGTTTCACT CCTTCCACTT 620 CTATCACAAA GTCTACCACC TCTTGGAAGG ATTTTGCTGT TGCCGCTATC TGTAAGGCCG 95721 |||||| ||| ||||||||| |||||||||| ||||||| || |||||||| | ||||||| || CTATCAAAAA GTCTACCACT TCTTGGAAGG ATTTTGCCGT TGCCGCTACC TGTAAGGGCG 680 AGATCCGCAA TTCTGACCTC AACCCCTTCA CAAACCGGCG AATCCGCTCT TGA-GGACTG 95662 | |||||||| |||||||||| |||||||||| | |||||||| |||||||||| ||| |||||| AAATCCGCAA TTCTGACCTC AACCCCTTCA C-AACCGGCG AATCCGCTCT TGAGGGACTG 739 AAACAGAGTT GAGTGGCATA TCT 95639 ||||||||| |||||||||| ||| -AACAGAGTT GAGTGGCATA TCT 761 hqPGS_C10HBa0115K16.1-_SGN-E214046+ (96320 95639) ******************************************************************************** EST sequence 188 +strand 533 n (File: SGN-E353805+) 1 GGATCAACAA TACGGAAGCC ATGCAATCAC AAACTAGAAG ATTACCTGTG ATGACAGCAT 61 CAGATGCCTC CGCTTCAGAC CGCCCAGGGA AAGCGTAACA ATGGGCCCTA TCGTTTGTCT 121 GCCCATTGCC CCTACCATGT TGTGATGTAG TGGCCCCAGT TTGCCCATTA CCTCTGCCGT 181 TTTGGTGACC ACCATTACCT CGACCACCAC GTCCTCCAGA ATAACGGCCT CTACCATGAC 241 CACCTCTACC TCTAGCTATT GGGGGTCTAT AACTTGGTCC AGGACAATTT ATCCTAATAT 301 GTCCAATCTC CCCACATCCA TAACATTCTC TGGAGTCACT CATAGGCCCC TTGGAGAAGT 361 GTTGACCGGT CTGAGGTGGA CCCCCAACTA CAGTCTGTAG TGAAGACTGA ATGGGTCGAG 421 CCGAGTAACC TCCGGAACCT TGTCCTCTAA AGTAAGAACC CTTAAACTCA CCTCCCTTTC 481 GAAACCTCTT TGATGTTGAT GTCGTGGTGA AGTCGTCTGG CTTCACTCCT TCC Predicted gene structure (within gDNA segment 97232 to 93978): Exon 1 96310 95787 ( 524 n); cDNA 8 531 ( 524 n); score: 0.922 MATCH C10HBa0115K16.1- SGN-E353805+ 0.922 524 0.983 C PGS_C10HBa0115K16.1-_SGN-E353805+ (96310 95787) Alignment (genomic DNA sequence = upper lines): CAATACAGAA GTCATGCAAT CACAAACCAG AAGATTACCT GTGATGACAG CATCAGATGC 96251 |||||| ||| | |||||||| ||||||| || |||||||||| |||||||||| |||||||||| CAATACGGAA GCCATGCAAT CACAAACTAG AAGATTACCT GTGATGACAG CATCAGATGC 67 TTCCGGTTCA GACCGCCCAG GGAAAGCGTA ACAATGGTCC CTATCGTTCG TCTGTCCGTT 96191 |||| |||| |||||||||| |||||||||| ||||||| || |||||||| | |||| || || CTCCGCTTCA GACCGCCCAG GGAAAGCGTA ACAATGGGCC CTATCGTTTG TCTGCCCATT 127 GCCCCTACCA TGTTGTGATG TAGTGGCCCC ATTTTGCCCA TTACCTCTGC CGTTTTGGTG 96131 |||||||||| |||||||||| |||||||||| | |||||||| |||||||||| |||||||||| GCCCCTACCA TGTTGTGATG TAGTGGCCCC AGTTTGCCCA TTACCTCTGC CGTTTTGGTG 187 ACCACTATTA CCTCGACCAC CACGCCCTCC AGAAAAACGG CCTCTATCAT GACCACCTCT 96071 ||||| |||| |||||||||| |||| ||||| |||| ||||| |||||| ||| |||||||||| ACCACCATTA CCTCGACCAC CACGTCCTCC AGAATAACGG CCTCTACCAT GACCACCTCT 247 ACCTCTAGTT ATTGGGGGTC TGTAACTTGG TCTGGGACAA TTTCTCCTAA TATGTCCAAT 96011 |||||||| | |||||||||| | |||||||| || |||||| ||| |||||| |||||||||| ACCTCTAGCT ATTGGGGGTC TATAACTTGG TCCAGGACAA TTTATCCTAA TATGTCCAAT 307 CTCCCCACAT CCATAACATT CTTTGGAGTC GATCATATGC CCCTCGGAGA AGTGTTGACC 95951 |||||||||| |||||||||| || ||||||| ||||| || |||| ||||| |||||||||| CTCCCCACAT CCATAACATT CTCTGGAGTC ACTCATAGGC CCCTTGGAGA AGTGTTGACC 367 GGTCTGAGGT GGTCCCCCAA CTACAGTCTG TAGAGAAGAC TGAATTGGTC GGACTGAGTA 95891 |||||||||| || ||||||| |||||||||| ||| |||||| ||||| |||| | | ||||| GGTCTGAGGT GGACCCCCAA CTACAGTCTG TAGTGAAGAC TGAATGGGTC GAGCCGAGTA 427 ACTTCCCGAA CCCTGTCCTC TAGTGTAAGA ACCATTAAAC TCACCTCCCT TTCGAAGCCT 95831 || ||| ||| || ||||||| || |||||| ||| |||||| |||||||||| |||||| ||| ACCTCCGGAA CCTTGTCCTC TAAAGTAAGA ACCCTTAAAC TCACCTCCCT TTCGAAACCT 487 TTTTGATGTC GATGTTGTGG TGAAGTCGCC TGGCTTCACT CCTT 95787 |||||||| ||||| |||| |||||||| | |||||||||| |||| CTTTGATGTT GATGTCGTGG TGAAGTCGTC TGGCTTCACT CCTT 531 hqPGS_C10HBa0115K16.1-_SGN-E353805+ (96310 95787) ******************************************************************************** EST sequence 122 +strand 716 n (File: SGN-E577713+) 1 CGGTGGATAC CTAGGCACCC AGAGACGAGG AAGGGCGTAG TAATCGACGA AATGCTTCGG 61 GGAGTTGAAA ATAAGCATAG ATCCGGAGAT TCCCGAATAG GGCAACCTTT CGAACTGCTG 121 CTGAATCCAT GGGCAGGCAA GAGACAACCT GGCGAACTGA AACATCTTAG TAGCCAGAGG 181 AAAAGAAAGC AAATAAGGAA GATACATAAG AAAACGTGGA TCCAGGATCA AACAATACAG 241 AAGCCATGCA ATCACAAACC AGAAGATTAC CTGTGATGAC AACATCAGAT GCCTCCGCTT 301 CACACCGCCC AGGGAAAGCG TAACAATGGG CCCTATCGTT CGTCTGTCCG TTGCCCCTAC 361 CATGTTGTGA TGTAGTGGCC CAAGTTTGCC CATTACCTCT GCCGTTTTGG TGACCACCAT 421 TACCTCGACC ACCACGTCCT CCAGAATAAC GGCCTCTACC ATGACCACCT CTACCTCTAG 481 CTATTGGGGG TCTATAACTT TGTCTGGGAC AATTTTTCCT AATATGTCCA ATCTCCCCAC 541 ATCCATACCA TTCTCTGGAG TCAATCCTAG GCCCCTCGGA GAAGTGTTGA CCGGTCTGAG 601 GTGGTCCCCC AACTACAGTC TGTAGTGAAG ACTCAATTGG TCGGACTGAG TAACTTCCCG 661 AACCCTGTCC TCTAGTGTAA GAACCATTAA ACTCACCTCC CTTTCGAAGC CTTTTT Predicted gene structure (within gDNA segment 99338 to 95217): Exon 1 96320 95827 ( 494 n); cDNA 225 716 ( 492 n); score: 0.947 MATCH C10HBa0115K16.1- SGN-E577713+ 0.947 494 0.690 C PGS_C10HBa0115K16.1-_SGN-E577713+ (96320 95827) Alignment (genomic DNA sequence = upper lines): GGTTCAAGAT CAATACAGAA GTCATGCAAT CACAAACCAG AAGATTACCT GTGATGACAG 96261 || |||| | |||||||||| | |||||||| |||||||||| |||||||||| ||||||||| GGATCAA-A- CAATACAGAA GCCATGCAAT CACAAACCAG AAGATTACCT GTGATGACAA 282 CATCAGATGC TTCCGGTTCA GACCGCCCAG GGAAAGCGTA ACAATGGTCC CTATCGTTCG 96201 |||||||||| |||| |||| ||||||||| |||||||||| ||||||| || |||||||||| CATCAGATGC CTCCGCTTCA CACCGCCCAG GGAAAGCGTA ACAATGGGCC CTATCGTTCG 342 TCTGTCCGTT GCCCCTACCA TGTTGTGATG TAGTGGCCCC ATTTTGCCCA TTACCTCTGC 96141 |||||||||| |||||||||| |||||||||| ||||||||| | |||||||| |||||||||| TCTGTCCGTT GCCCCTACCA TGTTGTGATG TAGTGGCCCA AGTTTGCCCA TTACCTCTGC 402 CGTTTTGGTG ACCACTATTA CCTCGACCAC CACGCCCTCC AGAAAAACGG CCTCTATCAT 96081 |||||||||| ||||| |||| |||||||||| |||| ||||| |||| ||||| |||||| ||| CGTTTTGGTG ACCACCATTA CCTCGACCAC CACGTCCTCC AGAATAACGG CCTCTACCAT 462 GACCACCTCT ACCTCTAGTT ATTGGGGGTC TGTAACTTGG TCTGGGACAA TTTCTCCTAA 96021 |||||||||| |||||||| | |||||||||| | |||||| | |||||||||| ||| |||||| GACCACCTCT ACCTCTAGCT ATTGGGGGTC TATAACTTTG TCTGGGACAA TTTTTCCTAA 522 TATGTCCAAT CTCCCCACAT CCATAACATT CTTTGGAGTC GATCATATGC CCCTCGGAGA 95961 |||||||||| |||||||||| ||||| |||| || ||||||| ||| || || |||||||||| TATGTCCAAT CTCCCCACAT CCATACCATT CTCTGGAGTC AATCCTAGGC CCCTCGGAGA 582 AGTGTTGACC GGTCTGAGGT GGTCCCCCAA CTACAGTCTG TAGAGAAGAC TGAATTGGTC 95901 |||||||||| |||||||||| |||||||||| |||||||||| ||| |||||| | |||||||| AGTGTTGACC GGTCTGAGGT GGTCCCCCAA CTACAGTCTG TAGTGAAGAC TCAATTGGTC 642 GGACTGAGTA ACTTCCCGAA CCCTGTCCTC TAGTGTAAGA ACCATTAAAC TCACCTCCCT 95841 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGACTGAGTA ACTTCCCGAA CCCTGTCCTC TAGTGTAAGA ACCATTAAAC TCACCTCCCT 702 TTCGAAGCCT TTTT 95827 |||||||||| |||| TTCGAAGCCT TTTT 716 hqPGS_C10HBa0115K16.1-_SGN-E577713+ (96320 95827) ******************************************************************************** EST sequence 203 +strand 559 n (File: SGN-E244046+) 1 AAACACGAAT AGGCATATCA AGTAATTCAC AATGTAAAGT TAGACCATTA GCAAATGAGG 61 AAGATACATA AGAAAATGTG GATCCAGGAT CAAACAATAC AGAAGCCATG CAATCACAAA 121 CCAAAAGATT ACCTGTGATG ACAACATCAG ATTCCTCCGC TTCAGACCGC CCAGGGAAAG 181 CGTAACAATG GGCCCTATCA TTCTTATGTC TGTTGCCCCT ACCATGTTGT GATGTAGTGG 241 CTCCAGTTTG CCCATCACCT CGGCCGTTTT GGTGACCACC ATTTCCTCGA CCGCCACGTC 301 CTCCAGAATA ACGGACTCTG CCATGACCAC CTCTACCTCT AACCTTTGGA GGTCTGTAAC 361 TCTGTTTTGG ACAATATCTC TTAATATGTC CAATCTCCCC ACACCCATAG CACTCTCTGG 421 GTTCATGCAT AAGTCTCTCA GAGAAGTGTT GACCGGTCGA AGGTGGACCC CCAACTACAG 481 TCTGTAGTGA AGACTGAATT GGTCGGACTG AGTAACTTCC CGAACCCTGT CCTCTAGTGT 541 AAGCACCATT AAACTCACC Predicted gene structure (within gDNA segment 97958 to 95092): Exon 1 96320 95846 ( 475 n); cDNA 87 559 ( 473 n); score: 0.884 MATCH C10HBa0115K16.1- SGN-E244046+ 0.884 475 0.850 C PGS_C10HBa0115K16.1-_SGN-E244046+ (96320 95846) Alignment (genomic DNA sequence = upper lines): GGTTCAAGAT CAATACAGAA GTCATGCAAT CACAAACCAG AAGATTACCT GTGATGACAG 96261 || |||| | |||||||||| | |||||||| ||||||||| |||||||||| ||||||||| GGATCAA-A- CAATACAGAA GCCATGCAAT CACAAACCAA AAGATTACCT GTGATGACAA 144 CATCAGATGC TTCCGGTTCA GACCGCCCAG GGAAAGCGTA ACAATGGTCC CTATCGTTCG 96201 |||||||| | |||| |||| |||||||||| |||||||||| ||||||| || ||||| ||| CATCAGATTC CTCCGCTTCA GACCGCCCAG GGAAAGCGTA ACAATGGGCC CTATCATTCT 204 TCTGTCCGTT GCCCCTACCA TGTTGTGATG TAGTGGCCCC ATTTTGCCCA TTACCTCTGC 96141 | |||| ||| |||||||||| |||||||||| ||||||| || | |||||||| | ||||| || TATGTCTGTT GCCCCTACCA TGTTGTGATG TAGTGGCTCC AGTTTGCCCA TCACCTCGGC 264 CGTTTTGGTG ACCACTATTA CCTCGACCAC CACGCCCTCC AGAAAAACGG CCTCTATCAT 96081 |||||||||| ||||| ||| |||||||| | |||| ||||| |||| ||||| |||| ||| CGTTTTGGTG ACCACCATTT CCTCGACCGC CACGTCCTCC AGAATAACGG ACTCTGCCAT 324 GACCACCTCT ACCTCTAGTT ATTGGGGGTC TGTAACTTGG TCTGGGACAA TTTCTCCTAA 96021 |||||||||| ||||||| |||| |||| ||||||| | | | |||||| | |||| ||| GACCACCTCT ACCTCTAACC TTTGGAGGTC TGTAACTCTG TTTTGGACAA TATCTCTTAA 384 TATGTCCAAT CTCCCCACAT CCATAACATT CTTTGGAGTC GATCATATGC CCCTCGGAGA 95961 |||||||||| ||||||||| ||||| || | || ||| || |||| | | ||| |||| TATGTCCAAT CTCCCCACAC CCATAGCACT CTCTGGGTTC ATGCATAAGT CTCTCAGAGA 444 AGTGTTGACC GGTCTGAGGT GGTCCCCCAA CTACAGTCTG TAGAGAAGAC TGAATTGGTC 95901 |||||||||| |||| |||| || ||||||| |||||||||| ||| |||||| |||||||||| AGTGTTGACC GGTCGAAGGT GGACCCCCAA CTACAGTCTG TAGTGAAGAC TGAATTGGTC 504 GGACTGAGTA ACTTCCCGAA CCCTGTCCTC TAGTGTAAGA ACCATTAAAC TCACC 95846 |||||||||| |||||||||| |||||||||| ||||||||| |||||||||| ||||| GGACTGAGTA ACTTCCCGAA CCCTGTCCTC TAGTGTAAGC ACCATTAAAC TCACC 559 hqPGS_C10HBa0115K16.1-_SGN-E244046+ (96320 95846) ******************************************************************************** EST sequence 233 +strand 658 n (File: SGN-E355232+) 1 TCAATGCGAG GAAGAGGATA CTTGTTCTTA ATAGTTACCT TGTTCAGTTG TCTGTAGTCT 61 ATGCACATTC TAAAACTTCC ATCCTTCTTC TTCACAAATA AAACTGGAGC ACCCCAAGGA 121 GATGCACTTG GTCTAATGAA GACCTTGCTC AACAACTCTT GAAGTTGAGC CTTTAACTCT 181 CTTAATTCGG CGGGAGCCAT TCTATAAGGG GGTATAGAAA TGGGGCGTGT GCCTGGTTCA 241 AGATCGATAC AGAAGTCAAT ATCCCTATCT GGTGGCATAC CAGGAAGATC TGCAGGAAAC 301 ACGTCCAAAA ACTCGCGGAC TACCGAAACC GACTCAATTG AGGGTACTTG AGTAGTGTCA 361 TCCTTGAGAT GTGCCAAGAA AGCTGAACAC CCTTTACTAA CCATTTTCTT AGCACGAAGA 421 AAGGATATGA TACGCACCAG ATTGGAAGTG TAGTCACCCT CCCACACTAA CGGATCTGTC 481 CCAGGCTTGG CTAACGTCAC CGTTTTAGCA TTACAATCCA AGATCGCAAA ATTTGGAGAA 541 AGCCAAGTCA TACCCAGAAT TACATCAATG TCACCCATTT CTAAAAAACC AAATCTACAT 601 AAGTGTTGCT CCCCACGAAA TTCNACAAAA CAGAACTATG TACCTTTTCA ACTACCAC Predicted gene structure (within gDNA segment 97236 to 91390): Exon 1 96555 96298 ( 258 n); cDNA 1 257 ( 257 n); score: 0.911 MATCH C10HBa0115K16.1- SGN-E355232+ 0.911 258 0.392 C PGS_C10HBa0115K16.1-_SGN-E355232+ (96555 96298) Alignment (genomic DNA sequence = upper lines): TCAATGCGGG GAAGAGGATA CTTGTTCTTT ATGGTTACCT TGTTTTAGTT GTCTGTAGTC 96496 |||||||| | |||||||||| ||||||||| || ||||||| || || |||| |||||||||| TCAATGCGAG GAAGAGGATA CTTGTTCTTA ATAGTTACCT TG-TTCAGTT GTCTGTAGTC 59 TATACACATT CGAAAACTCC CATCCTTCTT CTTTACAAAC AAAACTGGAG CACCCCAAGG 96436 ||| |||||| | |||||| | |||||||||| ||| ||||| |||||||||| |||||||||| TATGCACATT CTAAAACTTC CATCCTTCTT CTTCACAAAT AAAACTGGAG CACCCCAAGG 119 AGATGCACTT GGTCTAATGA AGCCTTTGTT CAATAACTCT TGAAGTTGTG CTTTTAACTC 96376 |||||||||| |||||||||| || | ||| | ||| |||||| |||||||| | | |||||||| AGATGCACTT GGTCTAATGA AGACCTTGCT CAACAACTCT TGAAGTTGAG CCTTTAACTC 179 TCTTAACTCC GCGGGAGCCA TTCTATAAGG GGGTATAGAA ATGGGGTGAG TACCGGGTTC 96316 |||||| || |||||||||| |||||||||| |||||||||| |||||| | | | || ||||| TCTTAATTCG GCGGGAGCCA TTCTATAAGG GGGTATAGAA ATGGGGCGTG TGCCTGGTTC 239 AAGATCAATA CAGAAGTC 96298 |||||| ||| |||||||| AAGATCGATA CAGAAGTC 257 hqPGS_C10HBa0115K16.1-_SGN-E355232+ (96555 96298) ******************************************************************************** EST sequence 202 +strand 661 n (File: SGN-E351414+) 1 CGGAAACTCC CATCCTTCTT CTTCACAAAC AAAATCGGAG CACCCCAAGG AGATGCACTT 61 GGTCTAATGA AACCTTTGCT CAACAACTCT TGAAGTTGGG CCTTTAACTC TCTTAACTCT 121 ACGGGAGCCA TTCTATAAGG GGGTATAGAA ATGGGGCGTG TGCCCGGTTC AAGATCGATA 181 CAGAAGTCAA TATCCCTATC TGGTGGCATA CCAGGAAGAT CTGCAGGGAA CACATCCAAA 241 AACTCACAGA CTATAAAAAC CGACTCAATC GAAGGTACTT GGGTAGTGTC ATCCTTGAGA 301 TGTGCCAAGA AAGCTAAACA CCCTTTACTA ACCATTTTCT TAGCACGAAG AAAGGAGATG 361 ATGCACACCG GATTGGAAGT GTAGTCACCC TCCCACACTA ACGGATCTGT CCCAGGCTTG 421 GCTAATGTCA CCGTTTTAGC ATTACAATCC AAGATCGCAA ATTGCGGAGA AAGCCAAGTC 481 ATACCCAGAA TTACATCAAA ATCAACCATT TCTAAGATAA CCAAATCTAC ATAAGTGTTG 541 CTCCCCACAA AGTTCACCAA ACAAGACCTA TATACCTTTT CAACTACCAC AGACTCACCC 601 ACCGGAGTAG AAACACGAAT AGGCATATCA AGTAATTCAC AATGTAAATT TAGACCGTTA 661 G Predicted gene structure (within gDNA segment 97112 to 90670): Exon 1 96485 96298 ( 188 n); cDNA 1 188 ( 188 n); score: 0.915 MATCH C10HBa0115K16.1- SGN-E351414+ 0.915 188 0.284 C PGS_C10HBa0115K16.1-_SGN-E351414+ (96485 96298) Alignment (genomic DNA sequence = upper lines): CGAAAACTCC CATCCTTCTT CTTTACAAAC AAAACTGGAG CACCCCAAGG AGATGCACTT 96426 || ||||||| |||||||||| ||| |||||| |||| |||| |||||||||| |||||||||| CGGAAACTCC CATCCTTCTT CTTCACAAAC AAAATCGGAG CACCCCAAGG AGATGCACTT 60 GGTCTAATGA AGCCTTTGTT CAATAACTCT TGAAGTTGTG CTTTTAACTC TCTTAACTCC 96366 |||||||||| | |||||| | ||| |||||| |||||||| | | |||||||| ||||||||| GGTCTAATGA AACCTTTGCT CAACAACTCT TGAAGTTGGG CCTTTAACTC TCTTAACTCT 120 GCGGGAGCCA TTCTATAAGG GGGTATAGAA ATGGGGTGAG TACCGGGTTC AAGATCAATA 96306 ||||||||| |||||||||| |||||||||| |||||| | | | || ||||| |||||| ||| ACGGGAGCCA TTCTATAAGG GGGTATAGAA ATGGGGCGTG TGCCCGGTTC AAGATCGATA 180 CAGAAGTC 96298 |||||||| CAGAAGTC 188 hqPGS_C10HBa0115K16.1-_SGN-E351414+ (96485 96298) ******************************************************************************** EST sequence 234 +strand 761 n (File: SGN-E355244+) 1 CGGAAACTCC CATCCTTCTT CTTCACAAAC AAAATCGGAG CACCCCAAGG AGATGCACTT 61 GGTCTAATGA AACCTTTGCT CAACAACTCT TGAAGTTGGG CCTTTAACTC TCTTAACTCT 121 ACGGGAGCCA TTCTATAAGG GGGTATAGAA ATGGGGCGTG TGCCCGGTTC AAGATCGATA 181 CAGAAGTCAA TATCCCTATC TGGTGGCATA CCAGGAAGAT CTGCAGGGAA CACATCCAAA 241 AACTCACAGA CTATAAAAAC CGACTCAATC GAAGGTACTT GGGTAGTGTC ATCCTTGAGA 301 TGTGCCAAGA AAGCTAAACA CCCTTTACTA ACCATTTTCT TAGCACGAAG AAAGGAGATG 361 ATGCACACCG GATTGGAAGT GTAGTCACCC TCCCACACTA ACGGATCTGT CCCAGGCTTG 421 GCTAATGTCA CCGTTTTAGC ATTACAATCC AAGATCGCAA ATTGCGGAGA AAGCCAAGTC 481 ATACCCAGAA TTACATCAAA ATCAACCATT TCTAAGATAA CCAAATCTAC ATAAGTGTTG 541 CTCCCCACAA AGTTCACCAA ACAAGACCTA TATACCTTTT CAACTACCAC AGACTCACCC 601 ACCGGAGTAG AAACACGAAT AGGCATATCA AGTAATTCAC AATGTAAATT TAGACCGTTA 661 GCAAATGAGG AAGATACANT AGAAAACGTG GATCCCAGGA TCAACAATAC AGAAGCCATG 721 CAATCACAAT CGAAAGATTA CCTGTGATGA CAGCATCTAA T Predicted gene structure (within gDNA segment 97112 to 89670): Exon 1 96485 96298 ( 188 n); cDNA 1 188 ( 188 n); score: 0.915 MATCH C10HBa0115K16.1- SGN-E355244+ 0.915 188 0.247 C PGS_C10HBa0115K16.1-_SGN-E355244+ (96485 96298) Alignment (genomic DNA sequence = upper lines): CGAAAACTCC CATCCTTCTT CTTTACAAAC AAAACTGGAG CACCCCAAGG AGATGCACTT 96426 || ||||||| |||||||||| ||| |||||| |||| |||| |||||||||| |||||||||| CGGAAACTCC CATCCTTCTT CTTCACAAAC AAAATCGGAG CACCCCAAGG AGATGCACTT 60 GGTCTAATGA AGCCTTTGTT CAATAACTCT TGAAGTTGTG CTTTTAACTC TCTTAACTCC 96366 |||||||||| | |||||| | ||| |||||| |||||||| | | |||||||| ||||||||| GGTCTAATGA AACCTTTGCT CAACAACTCT TGAAGTTGGG CCTTTAACTC TCTTAACTCT 120 GCGGGAGCCA TTCTATAAGG GGGTATAGAA ATGGGGTGAG TACCGGGTTC AAGATCAATA 96306 ||||||||| |||||||||| |||||||||| |||||| | | | || ||||| |||||| ||| ACGGGAGCCA TTCTATAAGG GGGTATAGAA ATGGGGCGTG TGCCCGGTTC AAGATCGATA 180 CAGAAGTC 96298 |||||||| CAGAAGTC 188 hqPGS_C10HBa0115K16.1-_SGN-E355244+ (96485 96298) ******************************************************************************** EST sequence 238 +strand 679 n (File: SGN-E368762+) 1 GTCTCACCCA ATTCTTCACT GTCTCAATCT TACAAGGATC CACCATCACT CCATCCTTAG 61 AAACCACGTG CCCCAAGAAG GACACTGCAT CTATCCAAAA CTCACACTTA GAGAACTTGG 121 CATAAAGCTT TTTCTCCCTC AACATTTCTA ATACAATTCT CAAATGCTCC TCATGTTCCT 181 TCTTACTATT AGAGTATATC AGTATATCAT CAATAAACAT GATGACAAAG AGATCCAAAT 241 ATGGCTTAAA ATCCCGTTCA TCAAGCTCAT GAACGCAGCA GGGGCATTCG TAAGACCAAA 301 AGACATCACT ACAAATTCGT AATGCCCATA CCTGGTTCTA AAAGCAGTCT TTGGCACATC 361 CGTTGCCCGT ATTTTCAATT GATGATAACC GGATCTCAAG TCAATCTTAG AGAAGACACA 421 AGCACCTTGT AACTGATCGA ACAAGTCATC AATGCGAGGA AGTGGATACT TGTTCTTAAT 481 AGTTACCTTG TTCAACTGCC GGTAGTCTAT GCACATCCGA AAACTCCCAT CCTTCTTCTT 541 CACAAACCAA ACCGGAGCAC CCCAAGGAGA TGCACTTGGT CTAATGAAGA CTTTGCTCAA 601 AAACTCTTGA AGTTGGGCCT TTAACTCTCT TAACTCCGCG GGAGCCATTC TATAAGGGGG 661 TATAGAAATG GGGCGAGTG Predicted gene structure (within gDNA segment 97649 to 95660): Exon 1 97004 96325 ( 680 n); cDNA 1 678 ( 678 n); score: 0.932 MATCH C10HBa0115K16.1- SGN-E368762+ 0.932 680 1.001 C PGS_C10HBa0115K16.1-_SGN-E368762+ (97004 96325) Alignment (genomic DNA sequence = upper lines): GTCTTACCCA ATTCTTCACT GTCTCAATCT TAGAAGGATC CACCATCACT CCATCCTTAG 96945 |||| ||||| |||||||||| |||||||||| || ||||||| |||||||||| |||||||||| GTCTCACCCA ATTCTTCACT GTCTCAATCT TACAAGGATC CACCATCACT CCATCCTTAG 60 AAACCACGTG CCCCAAGAAG GACACCGCAT CTAGACAAAA CTCACACTTA GAGAACTTGG 96885 |||||||||| |||||||||| ||||| |||| ||| ||||| |||||||||| |||||||||| AAACCACGTG CCCCAAGAAG GACACTGCAT CTATCCAAAA CTCACACTTA GAGAACTTGG 120 CATAAAGCTT TTTCTCCCTC AACATTTCCA ATACCATTCT CAAATGCTCT TCATGTTCCT 96825 |||||||||| |||||||||| |||||||| | |||| ||||| ||||||||| |||||||||| CATAAAGCTT TTTCTCCCTC AACATTTCTA ATACAATTCT CAAATGCTCC TCATGTTCCT 180 TCTTGCTCTT TGAGTATACC AATATATCAT CAATAAATAC GATCACGAAG AGGTCCAAAT 96765 |||| || || ||||||| | | |||||||| ||||||| | ||| || ||| || ||||||| TCTTACTATT AGAGTATATC AGTATATCAT CAATAAACAT GATGACAAAG AGATCCAAAT 240 ATGGCTTAAA AATCCCGTTC ATCAAGCTCA TGAACGCAGC AGGGGCATTC GTAAGACCAA 96705 ||||||| || |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATGGCTT-AA AATCCCGTTC ATCAAGCTCA TGAACGCAGC AGGGGCATTC GTAAGACCAA 299 AGGACATCAC TACAAATTCG TAATGCCCAT ACCTCGTTCG AAAAGCAGTC TTTGGCACAT 96645 | |||||||| |||||||||| |||||||||| |||| |||| |||||||||| |||||||||| AAGACATCAC TACAAATTCG TAATGCCCAT ACCTGGTTCT AAAAGCAGTC TTTGGCACAT 359 CCGTTGCCCA TATTTTCAAT TGATGATAAC CGGATCTCAA GTCAATCTTA GAGAAGACAC 96585 ||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCGTTGCCCG TATTTTCAAT TGATGATAAC CGGATCTCAA GTCAATCTTA GAGAAGACAC 419 AAGCACCTTG TAACTGATTG AACAAATCAT CAATGCGGGG AAGAGGATAC TTGTTCTTTA 96525 |||||||||| |||||||| | ||||| |||| ||||||| || ||| |||||| |||||||| | AAGCACCTTG TAACTGATCG AACAAGTCAT CAATGCGAGG AAGTGGATAC TTGTTCTTAA 479 TGGTTACCTT GTTTTAGTTG TCTGTAGTCT ATACACATTC GAAAACTCCC ATCCTTCTTC 96465 | |||||||| | || | || | ||||||| || ||||| | |||||||||| |||||||||| TAGTTACCTT G-TTCAACTG CCGGTAGTCT ATGCACATCC GAAAACTCCC ATCCTTCTTC 538 TTTACAAACA AAACTGGAGC ACCCCAAGGA GATGCACTTG GTCTAATGAA GCCTTTGTTC 96405 || |||||| |||| ||||| |||||||||| |||||||||| |||||||||| | ||||| || TTCACAAACC AAACCGGAGC ACCCCAAGGA GATGCACTTG GTCTAATGAA GACTTTGCTC 598 AATAACTCTT GAAGTTGTGC TTTTAACTCT CTTAACTCCG CGGGAGCCAT TCTATAAGGG 96345 || ||||||| ||||||| || ||||||||| |||||||||| |||||||||| |||||||||| AAAAACTCTT GAAGTTGGGC CTTTAACTCT CTTAACTCCG CGGGAGCCAT TCTATAAGGG 658 GGTATAGAAA TGGGGTGAGT 96325 |||||||||| ||||| |||| GGTATAGAAA TGGGGCGAGT 678 hqPGS_C10HBa0115K16.1-_SGN-E368762+ (97004 96325) ******************************************************************************** EST sequence 138 +strand 712 n (File: SGN-E379315+) 1 GAATCCCTTG ACAAATCGGC GGTAGTAGCT AGCTAACCCA ACAAAGCTCC TTATTTCTGA 61 CACATTAGTA GGTCTTACCC AATTCTTCAC TGTCTCAATC TTAGAAGGAT CCACCATCAC 121 TCCATCCTTA GAAACCACGT TCCCCAAGAA GGACACTACA TCTAGCCAAA ACTCACACTT 181 AGAGAACTTG GCATAAAACT TTTTCTCCCT CAACATTTCC AATACCATTC TCAAATGCTC 241 TTCATGTTCC TCCTTACTTT TAGAGTATAT CAGTATATCA TCAATAAATA CGATCACAAA 301 GAGATCCAAA TATGGCTTAA AAATCCCTTT TATTAAACTC ATAAACGCAG CAGGGGCATT 361 CATAAGACCA AAAGACATCA CTACAAATTT GTAATGCCCA TACCTGGTTC TAAAAGCAGT 421 CTTTGGCACA TCCGTTGCCC GTATTTTCAA TTGATGATAA CCGGATCTCA AGTCAATCTT 481 AGAAAAGACA CAAGCACCTT GTAACTGATC GAACAAGTCA TTAATGCGAG GAAGAGGATA 541 CTTGTTCTTT ATGGTTACCT TGTTNCACTG CCGGTAGCCT ATGCACATCC GAAAACTCCA 601 ATCCTTCTTC TTTACAAACA AAACCGGAGC ACCCCAAGGA GATGCAGTTG GTCTAATGAA 661 GCCTTTGCTC ACAACTCTTT GAAGTGGTCT TTTAACTCTC TTAACTCTGC GG Predicted gene structure (within gDNA segment 97675 to 95348): Exon 1 97075 96362 ( 714 n); cDNA 1 712 ( 712 n); score: 0.928 MATCH C10HBa0115K16.1- SGN-E379315+ 0.928 714 1.003 C PGS_C10HBa0115K16.1-_SGN-E379315+ (97075 96362) Alignment (genomic DNA sequence = upper lines): GAATCCCTTG ACAAATCGGC GGTAGTAGCT AGCTAACCCA ACAAAGCTCC TTATTTCTAA 97016 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||| | GAATCCCTTG ACAAATCGGC GGTAGTAGCT AGCTAACCCA ACAAAGCTCC TTATTTCTGA 60 CACATTAGTG GGTCTTACCC AATTCTTCAC TGTCTCAATC TTAGAAGGAT CCACCATCAC 96956 ||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CACATTAGTA GGTCTTACCC AATTCTTCAC TGTCTCAATC TTAGAAGGAT CCACCATCAC 120 TCCATCCTTA GAAACCACGT GCCCCAAGAA GGACACCGCA TCTAGACAAA ACTCACACTT 96896 |||||||||| |||||||||| ||||||||| |||||| || ||||| |||| |||||||||| TCCATCCTTA GAAACCACGT TCCCCAAGAA GGACACTACA TCTAGCCAAA ACTCACACTT 180 AGAGAACTTG GCATAAAGCT TTTTCTCCCT CAACATTTCC AATACCATTC TCAAATGCTC 96836 |||||||||| ||||||| || |||||||||| |||||||||| |||||||||| |||||||||| AGAGAACTTG GCATAAAACT TTTTCTCCCT CAACATTTCC AATACCATTC TCAAATGCTC 240 TTCATGTTCC TTCTTGCTCT TTGAGTATAC CAATATATCA TCAATAAATA CGATCACGAA 96776 |||||||||| | ||| || | | ||||||| || ||||||| |||||||||| ||||||| || TTCATGTTCC TCCTTACTTT TAGAGTATAT CAGTATATCA TCAATAAATA CGATCACAAA 300 GAGGTCCAAA TATGGCTTAA AAATCCCGTT CATCAAGCTC ATGAACGCAG CAGGGGCATT 96716 ||| |||||| |||||||||| ||||||| || || || ||| || ||||||| |||||||||| GAGATCCAAA TATGGCTTAA AAATCCCTTT TATTAAACTC ATAAACGCAG CAGGGGCATT 360 CGTAAGACCA AAGGACATCA CTACAAATTC GTAATGCCCA TACCTCGTTC GAAAAGCAGT 96656 | |||||||| || ||||||| ||||||||| |||||||||| ||||| |||| ||||||||| CATAAGACCA AAAGACATCA CTACAAATTT GTAATGCCCA TACCTGGTTC TAAAAGCAGT 420 CTTTGGCACA TCCGTTGCCC ATATTTTCAA TTGATGATAA CCGGATCTCA AGTCAATCTT 96596 |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| |||||||||| CTTTGGCACA TCCGTTGCCC GTATTTTCAA TTGATGATAA CCGGATCTCA AGTCAATCTT 480 AGAGAAGACA CAAGCACCTT GTAACTGATT GAACAAATCA TCAATGCGGG GAAGAGGATA 96536 ||| |||||| |||||||||| ||||||||| |||||| ||| | |||||| | |||||||||| AGAAAAGACA CAAGCACCTT GTAACTGATC GAACAAGTCA TTAATGCGAG GAAGAGGATA 540 CTTGTTCTTT ATGGTTACCT TGTTTTAGTT GTCTGTAGTC TATACACATT CGAAAACTCC 96476 |||||||||| |||||||||| |||| | | | | |||| | ||| ||||| |||||||||| CTTGTTCTTT ATGGTTACCT TGTTNCA-CT GCCGGTAGCC TATGCACATC CGAAAACTCC 599 CATCCTTCTT CTTTACAAAC AAAACTGGAG CACCCCAAGG AGATGCACTT GGTCTAATGA 96416 ||||||||| |||||||||| ||||| |||| |||||||||| ||||||| || |||||||||| AATCCTTCTT CTTTACAAAC AAAACCGGAG CACCCCAAGG AGATGCAGTT GGTCTAATGA 659 AGCCTTTGTT CAATAACTC- TTGAAGTTGT GCTTTTAACT CTCTTAACTC CGCGG 96362 |||||||| | | | ||||| ||||||| || ||||||||| |||||||||| |||| AGCCTTTGCT C-ACAACTCT TTGAAGTGGT -CTTTTAACT CTCTTAACTC TGCGG 712 hqPGS_C10HBa0115K16.1-_SGN-E379315+ (97075 96362) ******************************************************************************** EST sequence 116 +strand 709 n (File: SGN-E578271+) 1 GTTCTTTATG GTTACCTTGT TTAGTTGTCT GTAGTCTATA TACATTCGAA AACTCCCATC 61 CTTCTTCTTT ACAAACAAAA CCGGAGCACC CAAGGGGATG CACTTGGTCT AATGAAGCCT 121 TTGTTGCTAC AAAGATATGA CCTATATATC ATATCTTGAC TGGTTCTTTA GATCCAGATA 181 ATGCGAAGTG ATGGGTTGGT TATTAGTTCT ATAGTTTTTA GTTCATACTA TGTGGGCTGG 241 GTTTTTTTAA TCCTAACCCT AACAAAACCC ACGAGTCACA CACTAAGCAT AGCAATTATA 301 TCAAATGGTC AATCGAATTT TTATTCAACC TTATAGAATT AAGAATTAGA AAGAATTAAG 361 AATTAGAAAT GTTCCCCTTG ATTAGAAAAA GAATGAATTG GTCTTTTTTT TTGTTCAATC 421 ATTGGATAGA AGGGAAAGAC AAGTAGTAAA ATTATTCCTC GTCTAGAAAT ATCCAAATTT 481 TGATGCCCAA TATTCCATAG ATAGTTCGAA CTGTATAAGA GCAATAATCA ATTTTAGCTC 541 GAATCGTTTG TAGGGGAACC CTGCCTTCTC TGATCCATTC GACACGTGCA ATTTCTTTTC 601 CGTCGATACG CCCCGCAATT TGTATTTGAA TTCCTTGTGT ATCCGCTTGT TCTGTTAATT 661 CAATAGCCTT TTTCATTGCT TTTCGAAATG AAACTCTATT CTTTAATTG Predicted gene structure (within gDNA segment 97132 to 89956): Exon 1 96532 96409 ( 124 n); cDNA 1 122 ( 122 n); score: 0.960 Intron 1 96408 92263 (4146 n); Pd: 0.000 (s: 0.94), Pa: 0.987 (s: 0) Exon 2 92262 92237 ( 26 n); cDNA 123 148 ( 26 n); score: 0.654 MATCH C10HBa0115K16.1- SGN-E578271+ 0.960 150 0.212 C PGS_C10HBa0115K16.1-_SGN-E578271+ (96532 96409,92262 92237) Alignment (genomic DNA sequence = upper lines): GTTCTTTATG GTTACCTTGT TTTAGTTGTC TGTAGTCTAT ACACATTCGA AAACTCCCAT 96473 |||||||||| ||||||||| |||||||||| |||||||||| | |||||||| |||||||||| GTTCTTTATG GTTACCTTG- TTTAGTTGTC TGTAGTCTAT ATACATTCGA AAACTCCCAT 59 CCTTCTTCTT TACAAACAAA ACTGGAGCAC CCCAAGGAGA TGCACTTGGT CTAATGAAGC 96413 |||||||||| |||||||||| || |||||| ||||||| || |||||||||| |||||||||| CCTTCTTCTT TACAAACAAA ACCGGAGCA- CCCAAGGGGA TGCACTTGGT CTAATGAAGC 118 CTTTGTTCAA TAACTCTTGA AGTTGTGCTT TTAACTCTCT TAACTCCGCG GGAGCCATTC 96353 |||| CTTT...... .......... .......... .......... .......... .......... 122 TATAAGGGGG TATAGAAATG GGGTGAGTAC CGGGTTCAAG ATCAATACAG AAGTCATGCA 96293 .......... .......... .......... .......... .......... .......... 122 ATCACAAACC AGAAGATTAC CTGTGATGAC AGCATCAGAT GCTTCCGGTT CAGACCGCCC 96233 .......... .......... .......... .......... .......... .......... 122 AGGGAAAGCG TAACAATGGT CCCTATCGTT CGTCTGTCCG TTGCCCCTAC CATGTTGTGA 96173 .......... .......... .......... .......... .......... .......... 122 TGTAGTGGCC CCATTTTGCC CATTACCTCT GCCGTTTTGG TGACCACTAT TACCTCGACC 96113 .......... .......... .......... .......... .......... .......... 122 ACCACGCCCT CCAGAAAAAC GGCCTCTATC ATGACCACCT CTACCTCTAG TTATTGGGGG 96053 .......... .......... .......... .......... .......... .......... 122 TCTGTAACTT GGTCTGGGAC AATTTCTCCT AATATGTCCA ATCTCCCCAC ATCCATAACA 95993 .......... .......... .......... .......... .......... .......... 122 TTCTTTGGAG TCGATCATAT GCCCCTCGGA GAAGTGTTGA CCGGTCTGAG GTGGTCCCCC 95933 .......... .......... .......... .......... .......... .......... 122 AACTACAGTC TGTAGAGAAG ACTGAATTGG TCGGACTGAG TAACTTCCCG AACCCTGTCC 95873 .......... .......... .......... .......... .......... .......... 122 TCTAGTGTAA GAACCATTAA ACTCACCTCC CTTTCGAAGC CTTTTTGATG TCGATGTTGT 95813 .......... .......... .......... .......... .......... .......... 122 GGTGAAGTCG CCTGGCTTCA CTCCTTTCAC TTCTATCACA AAGTCTACCA CCTCTTGGAA 95753 .......... .......... .......... .......... .......... .......... 122 GGATTTTGCT GTTGCCGCTA TCTGTAAGGC CGAGATCCGC AATTCTGACC TCAACCCCTT 95693 .......... .......... .......... .......... .......... .......... 122 CACAAACCGG CGAATCCGCT CTTGAGGACT GAAACAGAGT TGAGTGGCAT ATCTAGATAA 95633 .......... .......... .......... .......... .......... .......... 122 TGCACGAAAC TTAGCCTCAT AAGCATTAAC CGACATCCTA CCTTGCTCTA GGCTCAAGAA 95573 .......... .......... .......... .......... .......... .......... 122 CTCATCCCTT TTCCTATCCC TCAAAGTTCG GGGGATATAC TTCTCCATAA ACAAACTAGA 95513 .......... .......... .......... .......... .......... .......... 122 GAATGAGGCC CAAGTCATAG GTGGTGCCTC TATTGGTTGA CACTCGATAT GTGACCGCCA 95453 .......... .......... .......... .......... .......... .......... 122 CCACATTTTG GCATTCCCTT GAAACTGATA AGTCACAAAC TCCACACCAA ACCGTTCTAC 95393 .......... .......... .......... .......... .......... .......... 122 TATACCCATC TTGTGTAGTA GCTCGTGACA GTCAACCAGA AAATCATAAG CATCCTCAGA 95333 .......... .......... .......... .......... .......... .......... 122 TTCCGCACCC TTGAAGACTG GAGTTTTCAA TTTCAAGAAC ATACTGAAAA GTTCATGCTG 95273 .......... .......... .......... .......... .......... .......... 122 ATCATTTGTC ATTATAGGCC CAGTAGTCAG ACGTGGAAAC GTGCCTATTT CCAATGGAAC 95213 .......... .......... .......... .......... .......... .......... 122 ATCCATGCGG GGAGCCATAG TAGCCGCATG TTGTACTTCT GAAACCGGAG GTGTTGGCGC 95153 .......... .......... .......... .......... .......... .......... 122 AGAAAACACT GGAGGTGCCT GACCTTGATC AGATAACCCG CTAAGATAAG TCAGAACCTG 95093 .......... .......... .......... .......... .......... .......... 122 ATTGATCATC TCTAGGGTAG GTTGGGGTGG CATTTCCTCA TTTTGCACTT GTTCAGTTTC 95033 .......... .......... .......... .......... .......... .......... 122 TCCATCCTCC CCTTCTCTTA TTACTTCCTC GGTCGGTGGA GGAGTCACTG CCCTAGTATC 94973 .......... .......... .......... .......... .......... .......... 122 AGATGGGCTA GGTGCTTGTC CTCTCCCTCT AGAGGACGTC CTCCCACGAC CTCTTCCACG 94913 .......... .......... .......... .......... .......... .......... 122 GCCCCTTGCC GCTGTTTTTC CTCGAGCCAC AACCCCAGTG GCTGGCTCCG TTGTTTCTTG 94853 .......... .......... .......... .......... .......... .......... 122 TCTGGCCGGT GTTGGTGTTG ACGTAGTCGT TGCTCTAGTT CTAACCATCT GCGAAAGAGA 94793 .......... .......... .......... .......... .......... .......... 122 GTGAAGATGG TCAGATACCA ATTCGTATCG CCTAGATACC AATTGGACTC AAGTAGTAGC 94733 .......... .......... .......... .......... .......... .......... 122 ATAAAAGAAA GAATGAAAGA GTGAAATTTT TCCGAAAGTC TTATAGCCTC TCAAGGAAAA 94673 .......... .......... .......... .......... .......... .......... 122 GTAAAGGCGT CCCCCTACCG TTCCTTAAGA CTCTACTAGA CCTGTTCTTG TGTGATGAGA 94613 .......... .......... .......... .......... .......... .......... 122 CCAACGAACC TAAGGCTCTG ATACCAAGTT TGTCACGACC CAAACCGGGT TGCGACTGGC 94553 .......... .......... .......... .......... .......... .......... 122 ACCCACACTT ACCCTCCTAT GTGAGCGAAC CAACCGATCT AAACCTTAAC ATTTCTATGT 94493 .......... .......... .......... .......... .......... .......... 122 AATAACAACA GAAAGTAATG CGGAACACTT AACTCATTAA TAAAAACCAA TTCAATAACT 94433 .......... .......... .......... .......... .......... .......... 122 ATCAATATTC AACATCTATT ATTCCCAAAA CCTGGAAGTC ATCATCACAA GAACATCTAC 94373 .......... .......... .......... .......... .......... .......... 122 GATCAAATGA CTAAACTAAG AGTATTCTAA AAGCTAAAAA TACATCAGAA GCTAGTCCAT 94313 .......... .......... .......... .......... .......... .......... 122 GCCAGAAGTT CAAGGCATCA AGACTTGAAG AAGGAGATCC AGTCCAAGCT AGAAGCATTA 94253 .......... .......... .......... .......... .......... .......... 122 GCTCACCCTG AATTTCCGAT GTGGTAAGAC TGGCTTGAAT TACTGTTGAG TTGAAGACGA 94193 .......... .......... .......... .......... .......... .......... 122 TGGCACGTTT GCTGCACTCC ACAAATAAAC AAGAAGAAAA CATAAAAGTA GGGGTTAGTA 94133 .......... .......... .......... .......... .......... .......... 122 CAAAACACGG GTACTCAGTA GATATCATCG GCCAACTCAA AATAGGGGAC AGTATATATC 94073 .......... .......... .......... .......... .......... .......... 122 AATATTATCG TAAATCAACT ATAAAACTCA ACATGTAGCC ACAACAAGTA TTATAATCAT 94013 .......... .......... .......... .......... .......... .......... 122 CAATAAGTAC CATCAAGTTC ATCCATGAGG GCTCAAGCCT TAACACCATA CTCATTTGGG 93953 .......... .......... .......... .......... .......... .......... 122 AATTATGTTC GTTAGATTGA GTATATTAAC ATCTTTCAAG ATTCATTATC TTTAATTCTC 93893 .......... .......... .......... .......... .......... .......... 122 TTGTGTCGGT ACGTGACACT TCGATCCCTC ATATTCATTA TTCCTCTTGT GTCGGTACGT 93833 .......... .......... .......... .......... .......... .......... 122 GACACTCCGA TCCCCTATAT CTACGTGTCG GTTCGTGACA CCCGATCCCC TAATTCTACG 93773 .......... .......... .......... .......... .......... .......... 122 TGTCGGTTCG TGACACCCGA TCCCCTAATT CTACGTGTCG GTTCGTGACA CCCGATCCCC 93713 .......... .......... .......... .......... .......... .......... 122 TAATTCTACG TGTCGGTTCG TGACACCCGA TCCCCTAATT CTACGTGTCG GTTCGTGACA 93653 .......... .......... .......... .......... .......... .......... 122 CCCGATCCCC TAATTCTACG TGTCGGTTCG TGACACCCGA TCCCCTAATT CTACATGTCG 93593 .......... .......... .......... .......... .......... .......... 122 GTTCGTGACA CCCGATCCCC TATATCATTC TGTAAATCAT CAGGCCTTCT CTATACCAAG 93533 .......... .......... .......... .......... .......... .......... 122 GCATCATCAA TCCCATTAAT TTAATTCATA AAGCCTTCTT CTATACCAAA GCATCATCAT 93473 .......... .......... .......... .......... .......... .......... 122 TAATAATGTA TATTAAAGTT TCCTTTCAAG ATTTGGGATT CAATATTTTC ATCATGCTTA 93413 .......... .......... .......... .......... .......... .......... 122 TCTTATCACA ATCACATAAT CATATTCACG CAAACATAAA ATTAAGCATA TAGTAGGGTT 93353 .......... .......... .......... .......... .......... .......... 122 TACAATACTA CCAATACATA TCATTCTCTA TTAAGAGTTT ACTATGAAAG TATGAAAACC 93293 .......... .......... .......... .......... .......... .......... 122 ATAACCAACC TCCACCGAAG ATTAGTGATC AAGCAAGCAA ATTTTTCTTC AAGCTTTGTT 93233 .......... .......... .......... .......... .......... .......... 122 TCTCCCTTCT CGTTCGATTC TCCCTCTCTC TCTTGTTCTT TCTATTTTCT TTATTCCAAC 93173 .......... .......... .......... .......... .......... .......... 122 CCTATTTCTT TTACCCTAAT TAGTATATAA TTAAGAATAA AAGATGGCAA TAATACCCCA 93113 .......... .......... .......... .......... .......... .......... 122 CTAATTAACT TAGGGTTACC TCTTTTAACC CCTCAAGAAT TTGAGTTATT AATATAAACC 93053 .......... .......... .......... .......... .......... .......... 122 CACGAACTTT ATAATTAAGG CAAGAATAGT CAAAAACGTC CCTTAAAACT TAACCAGAAA 92993 .......... .......... .......... .......... .......... .......... 122 TCCGACTCTG CCTGGGATTT GCACAACCTG TGACGGGCCG TCGTGCCTGC GACGGTCCGT 92933 .......... .......... .......... .......... .......... .......... 122 CCTGCAGGTC GTCGTAGAGT TCAGAGACCC AAATTTCCAC CAAGGGTCTG TGACGGTCCG 92873 .......... .......... .......... .......... .......... .......... 122 TCACACCTGT GACGGTCCGT CCTTCCATTC CGTCACAAAG TTCAGAGAGT CGATTTTTAG 92813 .......... .......... .......... .......... .......... .......... 122 TACCCAATTT CAGATTTTCT AAGTGTTTTG AAATGAGACC CTGCGACAGT CCGTCGTGCC 92753 .......... .......... .......... .......... .......... .......... 122 CATGACGGTC CGTCATGGGG TTCGTCGCTT CTGCCAGTTT TTCCAGAAAT AAAGTCTGCC 92693 .......... .......... .......... .......... .......... .......... 122 GCTCAAAATG ACTAAACGGG TCGTTACAAG GGTATGGGAC CTTGTTTATG CATTACACAT 92633 .......... .......... .......... .......... .......... .......... 122 ATGTACCTTG ATAGGATAGT TCCTAGGTTT GGTTTCTATG TACGTGAAAG TGAATGTATA 92573 .......... .......... .......... .......... .......... .......... 122 TGATCATGTT ACAAATGTAT CTTACATGCT GTAATGTGAA GTATGATTAT ACCTAGTGTC 92513 .......... .......... .......... .......... .......... .......... 122 TAAATGTGTT TATATGAAAG CATGGCTCAT ATAGTTACAC TTGTACACTC ATGCATGAAT 92453 .......... .......... .......... .......... .......... .......... 122 GAAGTGAAGT ATGAATATGT GTGGTCTAAA GGTGTTATGT GAAAGGTTTC CTCACATGTA 92393 .......... .......... .......... .......... .......... .......... 122 TATACACACA CACATGAATG ATAATCTAGT TAGTAGAGGG GATCTTGAAA GGTGTTCTCA 92333 .......... .......... .......... .......... .......... .......... 122 AGAGTATGCT AAACTAGATA AATGCTTACA TATGCTATGT CCCTATGAAA GGTTTTGTGT 92273 .......... .......... .......... .......... .......... .......... 122 TATGATATAG GTTGATGAAA AGACTTCTCA TCTATA 92237 |||| | || ||| | | | |||| .......... GTTGCTACAA AGATATGACC TATATA 148 hqPGS_C10HBa0115K16.1-_SGN-E578271+ (96532 96409) ******************************************************************************** EST sequence 187 +strand 596 n (File: SGN-E375319+) 1 GAATCCCTTG ACAAATCGGC GGTAGTAGCT AGCTAACCCA ACAAAGCTCC TTATTTCTGA 61 CACATTAGTA GGTCTTACCC AATTCTTCAC TGTCTCAATC TTAGAAGGAT CCACCATCAC 121 TCCATCCTTA GAAACCACGT TCCCCAAGAA GGACACTACA TCTAGCCAAA ACTCACACTT 181 AGAGAACTTG GCATAAAACT TTTTCTCCCT CAACATTTCC AATACCATTC TCAAATGCTC 241 TTCATGTTCC TCCTTACTTT TAGAGTATAT CAGTATATCA TCAATAAATA CGATCACAAA 301 GAGATCCAAA TATGGCTTAA AAATCCCTTT TATTAAACTC ATAAACGCAG CAGGGGCATT 361 CATAAGACCA AAAGACATCA CTACAAATTT GTAATGCCCA TACCTGGTTC TAAAAGCAGT 421 CTTTGGCACA TCCGTTGCCC GTATTTTCAA TTGATGATAA CCGGATCTCA AGTCAATCTT 481 AGAAAAGACA CAAGCACCTT GTAACTGATC GAACAAGTCA TTAATGCGAG GAAGAGGATA 541 CTTGTTCTTT ATGGTTACCT TGTTCAACTG CCGGTAGCCT ATGCACATCC GAAAAC Predicted gene structure (within gDNA segment 97675 to 95582): Exon 1 97075 96479 ( 597 n); cDNA 1 596 ( 596 n); score: 0.933 MATCH C10HBa0115K16.1- SGN-E375319+ 0.933 597 1.002 C PGS_C10HBa0115K16.1-_SGN-E375319+ (97075 96479) Alignment (genomic DNA sequence = upper lines): GAATCCCTTG ACAAATCGGC GGTAGTAGCT AGCTAACCCA ACAAAGCTCC TTATTTCTAA 97016 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||| | GAATCCCTTG ACAAATCGGC GGTAGTAGCT AGCTAACCCA ACAAAGCTCC TTATTTCTGA 60 CACATTAGTG GGTCTTACCC AATTCTTCAC TGTCTCAATC TTAGAAGGAT CCACCATCAC 96956 ||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CACATTAGTA GGTCTTACCC AATTCTTCAC TGTCTCAATC TTAGAAGGAT CCACCATCAC 120 TCCATCCTTA GAAACCACGT GCCCCAAGAA GGACACCGCA TCTAGACAAA ACTCACACTT 96896 |||||||||| |||||||||| ||||||||| |||||| || ||||| |||| |||||||||| TCCATCCTTA GAAACCACGT TCCCCAAGAA GGACACTACA TCTAGCCAAA ACTCACACTT 180 AGAGAACTTG GCATAAAGCT TTTTCTCCCT CAACATTTCC AATACCATTC TCAAATGCTC 96836 |||||||||| ||||||| || |||||||||| |||||||||| |||||||||| |||||||||| AGAGAACTTG GCATAAAACT TTTTCTCCCT CAACATTTCC AATACCATTC TCAAATGCTC 240 TTCATGTTCC TTCTTGCTCT TTGAGTATAC CAATATATCA TCAATAAATA CGATCACGAA 96776 |||||||||| | ||| || | | ||||||| || ||||||| |||||||||| ||||||| || TTCATGTTCC TCCTTACTTT TAGAGTATAT CAGTATATCA TCAATAAATA CGATCACAAA 300 GAGGTCCAAA TATGGCTTAA AAATCCCGTT CATCAAGCTC ATGAACGCAG CAGGGGCATT 96716 ||| |||||| |||||||||| ||||||| || || || ||| || ||||||| |||||||||| GAGATCCAAA TATGGCTTAA AAATCCCTTT TATTAAACTC ATAAACGCAG CAGGGGCATT 360 CGTAAGACCA AAGGACATCA CTACAAATTC GTAATGCCCA TACCTCGTTC GAAAAGCAGT 96656 | |||||||| || ||||||| ||||||||| |||||||||| ||||| |||| ||||||||| CATAAGACCA AAAGACATCA CTACAAATTT GTAATGCCCA TACCTGGTTC TAAAAGCAGT 420 CTTTGGCACA TCCGTTGCCC ATATTTTCAA TTGATGATAA CCGGATCTCA AGTCAATCTT 96596 |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| |||||||||| CTTTGGCACA TCCGTTGCCC GTATTTTCAA TTGATGATAA CCGGATCTCA AGTCAATCTT 480 AGAGAAGACA CAAGCACCTT GTAACTGATT GAACAAATCA TCAATGCGGG GAAGAGGATA 96536 ||| |||||| |||||||||| ||||||||| |||||| ||| | |||||| | |||||||||| AGAAAAGACA CAAGCACCTT GTAACTGATC GAACAAGTCA TTAATGCGAG GAAGAGGATA 540 CTTGTTCTTT ATGGTTACCT TGTTTTAGTT GTCTGTAGTC TATACACATT CGAAAAC 96479 |||||||||| |||||||||| || || | | | | |||| | ||| ||||| ||||||| CTTGTTCTTT ATGGTTACCT TG-TTCAACT GCCGGTAGCC TATGCACATC CGAAAAC 596 hqPGS_C10HBa0115K16.1-_SGN-E375319+ (97075 96479) ******************************************************************************** EST sequence 157 +strand 526 n (File: SGN-E204434+) 1 GAATCCCTTG ACAAATCGGC GGTAGTAGCT AGCTAACCCA ACAAAGCTCC TTATTTCTGA 61 CACATTAGTA GGTCTTACCC AATTCTTCAC TGTCTCAATC TTAGAAGGAT CCACCATCAC 121 TCCATCCTTA GAAACCACGT TCCCCAAGAA GGACACTACA TCTAGCCAAA ACTCACACTT 181 AGAGAACTTG GCATAAAACT TTTTCTCCCT CAACATTTCC AATACCATTC TCAAATGCTC 241 TTCATGTTCC TCCTTACTTT TAGAGTATAT CAGTATATCA TCAATAAATA CGATCACAAA 301 GAGATCCAAA TATGGCTTAA AAATCCCTTT TATTAAACTC ATAAACGCAG CAGGGGCATT 361 CATAAGACCA AAAGACATCA CTACAAATTT GTAATGCCCA TACCTGGTTC TAAAAGCAGT 421 CTTTGGCACA TCCGTTGCCC GTATTTTCAA TTGATGATAA CCGGATCTCA AGTCAATCTT 481 AGAAAAGACA CAAGCACCTT GTAACTGATC GAACAAGTCA TTAATG Predicted gene structure (within gDNA segment 97675 to 95787): Exon 1 97075 96550 ( 526 n); cDNA 1 526 ( 526 n); score: 0.943 MATCH C10HBa0115K16.1- SGN-E204434+ 0.943 526 1.000 C PGS_C10HBa0115K16.1-_SGN-E204434+ (97075 96550) Alignment (genomic DNA sequence = upper lines): GAATCCCTTG ACAAATCGGC GGTAGTAGCT AGCTAACCCA ACAAAGCTCC TTATTTCTAA 97016 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||| | GAATCCCTTG ACAAATCGGC GGTAGTAGCT AGCTAACCCA ACAAAGCTCC TTATTTCTGA 60 CACATTAGTG GGTCTTACCC AATTCTTCAC TGTCTCAATC TTAGAAGGAT CCACCATCAC 96956 ||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CACATTAGTA GGTCTTACCC AATTCTTCAC TGTCTCAATC TTAGAAGGAT CCACCATCAC 120 TCCATCCTTA GAAACCACGT GCCCCAAGAA GGACACCGCA TCTAGACAAA ACTCACACTT 96896 |||||||||| |||||||||| ||||||||| |||||| || ||||| |||| |||||||||| TCCATCCTTA GAAACCACGT TCCCCAAGAA GGACACTACA TCTAGCCAAA ACTCACACTT 180 AGAGAACTTG GCATAAAGCT TTTTCTCCCT CAACATTTCC AATACCATTC TCAAATGCTC 96836 |||||||||| ||||||| || |||||||||| |||||||||| |||||||||| |||||||||| AGAGAACTTG GCATAAAACT TTTTCTCCCT CAACATTTCC AATACCATTC TCAAATGCTC 240 TTCATGTTCC TTCTTGCTCT TTGAGTATAC CAATATATCA TCAATAAATA CGATCACGAA 96776 |||||||||| | ||| || | | ||||||| || ||||||| |||||||||| ||||||| || TTCATGTTCC TCCTTACTTT TAGAGTATAT CAGTATATCA TCAATAAATA CGATCACAAA 300 GAGGTCCAAA TATGGCTTAA AAATCCCGTT CATCAAGCTC ATGAACGCAG CAGGGGCATT 96716 ||| |||||| |||||||||| ||||||| || || || ||| || ||||||| |||||||||| GAGATCCAAA TATGGCTTAA AAATCCCTTT TATTAAACTC ATAAACGCAG CAGGGGCATT 360 CGTAAGACCA AAGGACATCA CTACAAATTC GTAATGCCCA TACCTCGTTC GAAAAGCAGT 96656 | |||||||| || ||||||| ||||||||| |||||||||| ||||| |||| ||||||||| CATAAGACCA AAAGACATCA CTACAAATTT GTAATGCCCA TACCTGGTTC TAAAAGCAGT 420 CTTTGGCACA TCCGTTGCCC ATATTTTCAA TTGATGATAA CCGGATCTCA AGTCAATCTT 96596 |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| |||||||||| CTTTGGCACA TCCGTTGCCC GTATTTTCAA TTGATGATAA CCGGATCTCA AGTCAATCTT 480 AGAGAAGACA CAAGCACCTT GTAACTGATT GAACAAATCA TCAATG 96550 ||| |||||| |||||||||| ||||||||| |||||| ||| | |||| AGAAAAGACA CAAGCACCTT GTAACTGATC GAACAAGTCA TTAATG 526 hqPGS_C10HBa0115K16.1-_SGN-E204434+ (97075 96550) ******************************************************************************** EST sequence 259 +strand 358 n (File: SGN-E240817+) 1 GTCTCACCCA TTTCTTCACT GTCTCAATCT TACCAGGATC CACCATCACT CCATCCTTAG 61 AAACCACGTG CCCCAAGAAG GACACTGCAT CTATCCAAAA CTCACACTTA GAGAACTTGG 121 CATAAAGCTT TTTCTCCCTC AACATTTCTA ATACAATTCT CAAATGCTCC TCATGTTCCT 181 TCTTACTATT AGAGGATATC AGTATATCAT CAATGAACAT GATGACGCAG AGATCCAAAT 241 ATGGCTTAAA ATCCCGTTCA TCAAGCTCAT GAACGCAGCA GGGGCATTCG TAAGACCAAA 301 AGACATCACT ACAAATTCGT AATGCCCATA CCTGGTTCTA AAAGCAGTCT TTGGCACA Predicted gene structure (within gDNA segment 97703 to 96036): Exon 1 97004 96646 ( 359 n); cDNA 1 358 ( 358 n); score: 0.928 MATCH C10HBa0115K16.1- SGN-E240817+ 0.928 359 1.003 C PGS_C10HBa0115K16.1-_SGN-E240817+ (97004 96646) Alignment (genomic DNA sequence = upper lines): GTCTTACCCA ATTCTTCACT GTCTCAATCT TAGAAGGATC CACCATCACT CCATCCTTAG 96945 |||| ||||| ||||||||| |||||||||| || |||||| |||||||||| |||||||||| GTCTCACCCA TTTCTTCACT GTCTCAATCT TACCAGGATC CACCATCACT CCATCCTTAG 60 AAACCACGTG CCCCAAGAAG GACACCGCAT CTAGACAAAA CTCACACTTA GAGAACTTGG 96885 |||||||||| |||||||||| ||||| |||| ||| ||||| |||||||||| |||||||||| AAACCACGTG CCCCAAGAAG GACACTGCAT CTATCCAAAA CTCACACTTA GAGAACTTGG 120 CATAAAGCTT TTTCTCCCTC AACATTTCCA ATACCATTCT CAAATGCTCT TCATGTTCCT 96825 |||||||||| |||||||||| |||||||| | |||| ||||| ||||||||| |||||||||| CATAAAGCTT TTTCTCCCTC AACATTTCTA ATACAATTCT CAAATGCTCC TCATGTTCCT 180 TCTTGCTCTT TGAGTATACC AATATATCAT CAATAAATAC GATCACGAAG AGGTCCAAAT 96765 |||| || || ||| ||| | | |||||||| |||| || | ||| ||| || || ||||||| TCTTACTATT AGAGGATATC AGTATATCAT CAATGAACAT GATGACGCAG AGATCCAAAT 240 ATGGCTTAAA AATCCCGTTC ATCAAGCTCA TGAACGCAGC AGGGGCATTC GTAAGACCAA 96705 ||||||| || |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATGGCTT-AA AATCCCGTTC ATCAAGCTCA TGAACGCAGC AGGGGCATTC GTAAGACCAA 299 AGGACATCAC TACAAATTCG TAATGCCCAT ACCTCGTTCG AAAAGCAGTC TTTGGCACA 96646 | |||||||| |||||||||| |||||||||| |||| |||| |||||||||| ||||||||| AAGACATCAC TACAAATTCG TAATGCCCAT ACCTGGTTCT AAAAGCAGTC TTTGGCACA 358 hqPGS_C10HBa0115K16.1-_SGN-E240817+ (97004 96646) ******************************************************************************** EST sequence 210 -strand 542 n (File: SGN-E353207-) 1 AAAGAAGCAA AAATCGATGA GGAAGGTGTT TTGAGAATAA GGGAAGGAGT ATGTGTACCC 61 CGCGTCGATG ATTTGATTCA CACTATTCTT ATATAGGCTC ATAGTTCGAA GTACTCTATA 121 CATCCTGGTG CAAACAAGAT GTATCGTGAC CTAAAGCAAC ATTTTTGGTG GAGTAGGATG 181 AAGCGTGACA TTGTTAATTT TGTTGCTCAA TGCCCGAATT GTCAGCAAGT AAAGTATGAA 241 CACCAGAGGC CTGGAGGGAC ACTTCAGAGA ATGCCCATTC CTGAATGGAA GTGGGAGAGA 301 ATTGCAATGG ACTTCGTGGT TAGTCATCCA AAGACGATGG GTAGGTATGA CTCTATTTGG 361 GTGATTGTTG ACAGATTAAC TAAGTCTGCT CACTCTATTT CGGTTAAGGT GACTTACAAT 421 GCAGAGAAGT TAGCCAAACT TTACATCTTA GAAATTGTTC GATTGCACGG AGTTCCACTC 481 TCCATCATAT CAGATAGAGG TACGCAATTT ACTTCTAAGT TTTGGAAAAC AGTACATGCC 541 GA Predicted gene structure (within gDNA segment 97093 to 99078): Exon 1 97793 98334 ( 542 n); cDNA 1 542 ( 542 n); score: 0.881 MATCH C10HBa0115K16.1+ SGN-E353207- 0.881 542 1.000 C PGS_C10HBa0115K16.1+_SGN-E353207- (97793 98334) Alignment (genomic DNA sequence = upper lines): AAGGAAGCAC AAATCGATGA GGAAGGTGTT TTGAGAATCA AGGGAAGG-G TATGCGTACC 97851 || |||||| |||||||||| |||||||||| |||||||| | |||||||| | |||| ||||| AAAGAAGCAA AAATCGATGA GGAAGGTGTT TTGAGAAT-A AGGGAAGGAG TATGTGTACC 59 CCGCGTCGAT GATTTGATCA ACACTATTCT GACAGAGGCT CATAGTTCAA AGTATTCGAT 97911 |||||||||| |||||||| |||||||||| | | ||||| |||||||| | |||| || || CCGCGTCGAT GATTTGATTC ACACTATTCT TATATAGGCT CATAGTTCGA AGTACTCTAT 119 ACATCCGGGT GCAACCAAGA TGTACCGTGA CCTAAAGCAA CACTTTTGGT GGAGTAGAAT 97971 |||||| ||| |||| ||||| |||| ||||| |||||||||| || ||||||| ||||||| || ACATCCTGGT GCAAACAAGA TGTATCGTGA CCTAAAGCAA CATTTTTGGT GGAGTAGGAT 179 GAAGCGTGAC GTTGTGGATT TTATTGCCAA ATGTCCAAAC TGTCAACAAG TAAAGTATGA 98031 |||||||||| |||| ||| || |||| | ||| || || ||||| |||| |||||||||| GAAGCGTGAC ATTGTTAATT TTGTTGCTCA ATGCCCGAAT TGTCAGCAAG TAAAGTATGA 239 ACACCAAAGG CCCGGAGGAA CACTTCAGAG AATGCCCATT CCAGAATGGA AGTGGGAAAG 98091 |||||| ||| || ||||| | |||||||||| |||||||||| || ||||||| ||||||| || ACACCAGAGG CCTGGAGGGA CACTTCAGAG AATGCCCATT CCTGAATGGA AGTGGGAGAG 299 AATTGCAATG GATTTTGTGG TTGGTCTTCC GAAGACAATG GGTAAGTATG ACTCCATTTG 98151 |||||||||| || || |||| || ||| ||| ||||| ||| |||| ||||| |||| ||||| AATTGCAATG GACTTCGTGG TTAGTCATCC AAAGACGATG GGTAGGTATG ACTCTATTTG 359 GGTGATTGTT GATAGGTTAA CTAAATCTGC TCATTTCATT CCGGTCAAGG TGACTTACAA 98211 |||||||||| || || |||| |||| ||||| ||| | ||| |||| |||| |||||||||| GGTGATTGTT GACAGATTAA CTAAGTCTGC TCACTCTATT TCGGTTAAGG TGACTTACAA 419 TGCAGAAAAG TTAGCCAAAC TTTACATCTC GGAAGTGGTG CGATTGCATG GGGTTCCACT 98271 |||||| ||| |||||||||| ||||||||| ||| | || |||||||| | | |||||||| TGCAGAGAAG TTAGCCAAAC TTTACATCTT AGAAATTGTT CGATTGCACG GAGTTCCACT 479 ATCCATCATA TCAGATAGAG GTACGCAGTT TACTTCTAAG TTTTGGATAA CATTGCATGC 98331 ||||||||| |||||||||| ||||||| || |||||||||| ||||||| || || | ||||| CTCCATCATA TCAGATAGAG GTACGCAATT TACTTCTAAG TTTTGGAAAA CAGTACATGC 539 GGA 98334 || CGA 542 hqPGS_C10HBa0115K16.1+_SGN-E353207- (97793 98334) ******************************************************************************** EST sequence 110 -strand 188 n (File: SGN-E577888-) 1 ACTAGTTCTC CCGATGGTCA GTCTGAGCGA ACGATTCAAG TGTTGGAGAA TATGCTTCGT 61 GCGTGTGTGA TAGAGTTTGG TGGTCATTGG GATAGCTTCC TACCCTTAGC GGAGTTTTCA 121 TACAATAATA GCTATCAATC AAGCATTGAT ATGGCTCCAT TTGAAGCATT GTATGGTAGG 181 AGATGTAG Predicted gene structure (within gDNA segment 97669 to 99156): Exon 1 98380 98556 ( 177 n); cDNA 12 188 ( 177 n); score: 0.955 MATCH C10HBa0115K16.1+ SGN-E577888- 0.955 177 0.941 C PGS_C10HBa0115K16.1+_SGN-E577888- (98380 98556) Alignment (genomic DNA sequence = upper lines): CGATGGTCAG TCTGAGAGAA CGATTCAAGT GTTGGAAGAT ATGCTTCGTG CATGTGTGAT 98439 |||||||||| |||||| ||| |||||||||| |||||| || |||||||||| | |||||||| CGATGGTCAG TCTGAGCGAA CGATTCAAGT GTTGGAGAAT ATGCTTCGTG CGTGTGTGAT 71 AGAGTTTGGT GGCCATTGGG ATAGCTTCTT TCCCTTAGCG GAGTTTTCAT ACAATAATAG 98499 |||||||||| || ||||||| |||||||| | ||||||||| |||||||||| |||||||||| AGAGTTTGGT GGTCATTGGG ATAGCTTCCT ACCCTTAGCG GAGTTTTCAT ACAATAATAG 131 CTATCACTCA AGCATTGATA TGGCTCCATT TGAAGCATTG TATGGTAGGA GATGTAG 98556 |||||| ||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||| CTATCAATCA AGCATTGATA TGGCTCCATT TGAAGCATTG TATGGTAGGA GATGTAG 188 hqPGS_C10HBa0115K16.1+_SGN-E577888- (98380 98556) ******************************************************************************** EST sequence 222 -strand 454 n (File: SGN-E396070-) 1 TCGAGGAGTC TAGTTTCAAA ACAATTAGAA ACTCCCCCCC CCGGTACTAA AAATCGACTC 61 TCTGAACTTC GTAACGGAAT GGCACGACGG ACCGTCACGG GCGTGACGGA CCGTCACAGA 121 CTCTTTGGTG GAAATTGAGT CTCTGAACCT TGCGACGACC TGCAGGACGG ACCGTCGCAG 181 GCACGACGGG CCATCACAGG TTGCGTAATC CCAGTCTGGG TCGGATTTCT TTACACGTTT 241 TAAGGGACGT TTTGGACTAT TCCTACTTTA ATTATAAAGT TAGTGGGTTT ATGTTAATAA 301 GTCTAATTAC CTGGGGGTTA AAAGAGGTAA CCTTGAGTAA ATTAGTGGGT TATTATTCCA 361 TCTTTTATTC TTAATTATAT GCTAATTAGG GTAAAAGAAG GAGGGTTTGA ATAAGAAAAA 421 GAAAAGAACA GAAAGAGAGA GAAGGAGAAT CGAT Predicted gene structure (within gDNA segment 97320 to 100848): Exon 1 99303 99327 ( 25 n); cDNA 81 104 ( 24 n); score: 0.840 Intron 1 99328 99401 ( 74 n); Pd: 0.000 (s: 0), Pa: 0.641 (s: 0.79) Exon 2 99402 99750 ( 349 n); cDNA 105 453 ( 349 n); score: 0.835 MATCH C10HBa0115K16.1+ SGN-E396070- 0.835 374 0.824 C PGS_C10HBa0115K16.1+_SGN-E396070- (99303 99327,99402 99750) Alignment (genomic DNA sequence = upper lines): GGCACGACGG ACCGTCGCAG GGTCTCGTTT CAAAACACTT AGAAAATCTG AAATTGGGTA 99362 |||||||||| |||||| | | || | GGCACGACGG ACCGTCAC-G GGCGT..... .......... .......... .......... 104 CTAAAAATCG ACTCTCTGAA CTTTGTGACG GAATGGCAGG ACGGACCGTC ACAGAC-CCG 99421 | |||||||||| |||||| | .......... .......... .......... .........G ACGGACCGTC ACAGACTCTT 125 TGGTGGAAAT TTGGGTCTCT AAACTCTACG ACGACCTGCA GGACGGACCG TCGCAGGCAC 99481 ||||||||| ||| |||||| ||| | || |||||||||| |||||||||| |||||||||| TGGTGGAAA- TTGAGTCTCT GAACCTTGCG ACGACCTGCA GGACGGACCG TCGCAGGCAC 184 GACGGCCCGT CAAAGGTTGC GCAAATCCCA GGCAGAGTCG GATTTCTGGT TAAGTTTTAA 99541 ||||| || | || ||||||| | ||||||| | | | |||| ||||||| | ||||||| GACGGGCCAT CACAGGTTGC G-TAATCCCA GTCTGGGTCG GATTTCTTTA CACGTTTTAA 243 GGGACGTTTT TGACTATTCT TGCCTTAATT ATAAAGTTCG TGGGTTTATA TTAATAACTC 99601 |||||||||| |||||||| | | |||||| |||||||| | ||||||||| ||||||| || GGGACGTTTT GGACTATTCC TACTTTAATT ATAAAGTTAG TGGGTTTATG TTAATAAGTC 303 AAATTCTGGA GGGGTTAAAA GAGGTAACCC TAAGTTAATT AGTGGGGTAT TATTGCCATC 99661 |||| |||||||||| ||||||||| | ||| |||| |||||| ||| |||| ||||| TAATTACCTG GGGGTTAAAA GAGGTAACCT TGAGTAAATT AGTGGGTTAT TATT-CCATC 362 TTTTATTCTT AATTATATAC TAATTAGGGT AAAAGAAAGA GGGTTGGAAT AA-AGAAA-A 99719 |||||||||| |||||||| | |||||||||| ||||||| || ||||| |||| || | ||| | TTTTATTCTT AATTATATGC TAATTAGGGT AAAAGAAGGA GGGTTTGAAT AAGAAAAAGA 422 TAGAAAGAAC AAGAGAGAGA GGGAGAATCG A 99750 | || | |||||||||| ||||||||| | AAAGAACAGA AAGAGAGAGA AGGAGAATCG A 453 hqPGS_C10HBa0115K16.1+_SGN-E396070- (99303 99327,99402 99750) ******************************************************************************** EST sequence 226 -strand 472 n (File: SGN-E236652-) 1 TCATGAGCAC GATGGACCGT CGAGGAGTCT CGTTTCAAAA CACTTAGAAA TTCTGAAATT 61 GGGTACTAAA AATCGACTCT CTGAACTTCG TAACGGAATG GCACGACGGA CCGTCACGGG 121 CGTGACGGAC CGTCACAGAC TCTTTGGTGG AAATTGAGTC TCTGAACCTT GCGACGACCT 181 GCAGGACGGA CCGTCGCAGG CACGACGGGC CATCACAGGT TGCGTAATCC CAGTCTGGGT 241 CGGATTTCTT TACACGTTTT AAGGGACGTT TTGGACTATT CCTACTTTAA TTATAAAGTT 301 AGTGGGTTTA TGTTAATAAG TCTAATTACC TGGGGGTTAA AAGAGGTAAC CTTGAGTAAA 361 TTAGTGGGTT ATTATTCCAT CTTTTATTCT TAATTATATG CTAATTAGGG TAAAAGAAGG 421 AGGGTTTGAA TAAGAAAAAG AAAAGAACAG AAAGAGAGAG AAGGAGAATC GA Predicted gene structure (within gDNA segment 98454 to 100838): Exon 1 99303 99327 ( 25 n); cDNA 100 123 ( 24 n); score: 0.840 Intron 1 99328 99401 ( 74 n); Pd: 0.000 (s: 0), Pa: 0.641 (s: 0.79) Exon 2 99402 99750 ( 349 n); cDNA 124 472 ( 349 n); score: 0.835 MATCH C10HBa0115K16.1+ SGN-E236652- 0.835 374 0.792 C PGS_C10HBa0115K16.1+_SGN-E236652- (99303 99327,99402 99750) Alignment (genomic DNA sequence = upper lines): GGCACGACGG ACCGTCGCAG GGTCTCGTTT CAAAACACTT AGAAAATCTG AAATTGGGTA 99362 |||||||||| |||||| | | || | GGCACGACGG ACCGTCAC-G GGCGT..... .......... .......... .......... 123 CTAAAAATCG ACTCTCTGAA CTTTGTGACG GAATGGCAGG ACGGACCGTC ACAGAC-CCG 99421 | |||||||||| |||||| | .......... .......... .......... .........G ACGGACCGTC ACAGACTCTT 144 TGGTGGAAAT TTGGGTCTCT AAACTCTACG ACGACCTGCA GGACGGACCG TCGCAGGCAC 99481 ||||||||| ||| |||||| ||| | || |||||||||| |||||||||| |||||||||| TGGTGGAAA- TTGAGTCTCT GAACCTTGCG ACGACCTGCA GGACGGACCG TCGCAGGCAC 203 GACGGCCCGT CAAAGGTTGC GCAAATCCCA GGCAGAGTCG GATTTCTGGT TAAGTTTTAA 99541 ||||| || | || ||||||| | ||||||| | | | |||| ||||||| | ||||||| GACGGGCCAT CACAGGTTGC G-TAATCCCA GTCTGGGTCG GATTTCTTTA CACGTTTTAA 262 GGGACGTTTT TGACTATTCT TGCCTTAATT ATAAAGTTCG TGGGTTTATA TTAATAACTC 99601 |||||||||| |||||||| | | |||||| |||||||| | ||||||||| ||||||| || GGGACGTTTT GGACTATTCC TACTTTAATT ATAAAGTTAG TGGGTTTATG TTAATAAGTC 322 AAATTCTGGA GGGGTTAAAA GAGGTAACCC TAAGTTAATT AGTGGGGTAT TATTGCCATC 99661 |||| |||||||||| ||||||||| | ||| |||| |||||| ||| |||| ||||| TAATTACCTG GGGGTTAAAA GAGGTAACCT TGAGTAAATT AGTGGGTTAT TATT-CCATC 381 TTTTATTCTT AATTATATAC TAATTAGGGT AAAAGAAAGA GGGTTGGAAT AA-AGAAA-A 99719 |||||||||| |||||||| | |||||||||| ||||||| || ||||| |||| || | ||| | TTTTATTCTT AATTATATGC TAATTAGGGT AAAAGAAGGA GGGTTTGAAT AAGAAAAAGA 441 TAGAAAGAAC AAGAGAGAGA GGGAGAATCG A 99750 | || | |||||||||| ||||||||| | AAAGAACAGA AAGAGAGAGA AGGAGAATCG A 472 hqPGS_C10HBa0115K16.1+_SGN-E236652- (99303 99327,99402 99750) ******************************************************************************** EST sequence 65 +strand 763 n (File: SGN-E354383+) 1 AGATTCGATG GAGAAAGTGA AGTCTATTCA AGAAAAGCTT CTAGCGGCGC AAAGTAGACA 61 AAAAGAATAT GCAGATCGAA AGGTTAGAGA CTTAGAGTTC ATGGAGGGCG AACAAGTCTT 121 GTTGAAAGTC TCGCCAATGA AAGGGGTGAT GCGGTTTCGT AAAAGAGGTA AGTTAAGTCC 181 AAGGTATATT GGACCATTTG AGGTACTAAA GCGAGTAGGG GAGGTGGCTT ATGAATTAGC 241 CTTACCTCCA GGGCTGTCCG GAGTACATCC GGTATTTCAT GTATCCATGT TGAAAAGATA 301 CCATGGAGAT GGAAACTACA TCATCCGTTG GGATTCAGTT TCGCTTGGTG AGAATTGGAC 361 TTATGAGGAG GAACCAGTTG CTATTTTAGA TAGAGAGGTT CGCAAGTTGA GGTCGAGAGA 421 AATTGCATCC ATCAAAGTTC AATGGAAGAA TCGACCGGTT GAAGAAGCTA CTTGGGAGAA 481 GGAGGCAGAT ATGCAAGAAA AATACCCACA TCTGTTTACA GATTCAGGTA CTCCTTTTCG 541 CCATTGTTTT TCTTCATTTG ATCGTTCGGG GACGAACGAT GGGTAAATTG GTATCTATTG 601 TAACGACCTG TTTAGTCGTT TTGAGCAGCA GATTTTAATT CTGGAAAAAC TGGCCAAGAC 661 CACGGGCACT GCGACGGACC GTCACAGGCA CGACGGCCCG TCGAAGGTGC ATCGTTTCAG 721 CATACTTAGA ATTTCTGAAT TTGGATATGA AAATCGACTC TCT Predicted gene structure (within gDNA segment 97927 to 101222): Exon 1 98618 99379 ( 762 n); cDNA 2 763 ( 762 n); score: 0.897 MATCH C10HBa0115K16.1+ SGN-E354383+ 0.897 762 0.999 C PGS_C10HBa0115K16.1+_SGN-E354383+ (98618 99379) Alignment (genomic DNA sequence = upper lines): GATTCGATAG AGAAAGTGAA GTCTATTCAA GAAAAGCTTC TAGCGGCGCA AAGTAGACAA 98677 |||||||| | |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATTCGATGG AGAAAGTGAA GTCTATTCAA GAAAAGCTTC TAGCGGCGCA AAGTAGACAA 61 AAAGAATATG CAGATCGAAA GGTTAGAGAC TTAGAGTTCA TGGAGGGTGA ACAAGTCTTG 98737 |||||||||| |||||||||| |||||||||| |||||||||| ||||||| || |||||||||| AAAGAATATG CAGATCGAAA GGTTAGAGAC TTAGAGTTCA TGGAGGGCGA ACAAGTCTTG 121 TTGAAAGTTT CACCAATGAA AGGGGTGATG CGGTTTGGAA AAAGGGGTAA ACTAAGTCCA 98797 |||||||| | | |||||||| |||||||||| |||||| | | |||| ||||| |||||||| TTGAAAGTCT CGCCAATGAA AGGGGTGATG CGGTTTCGTA AAAGAGGTAA GTTAAGTCCA 181 AGGTACATTG GACCATTTGA AGTACTTAAG CGAGTAGGAG AGGTGGCTTA TGAGTTAGCC 98857 ||||| |||| |||||||||| ||||| ||| |||||||| | |||||||||| ||| |||||| AGGTATATTG GACCATTTGA GGTACTAAAG CGAGTAGGGG AGGTGGCTTA TGAATTAGCC 241 TTGCCTCCAG GGCTGTCCGG AGTACATCCG GTATTCCATG TGTCGATGTT GAAAAGATAC 98917 || ||||||| |||||||||| |||||||||| ||||| |||| | || ||||| |||||||||| TTACCTCCAG GGCTGTCCGG AGTACATCCG GTATTTCATG TATCCATGTT GAAAAGATAC 301 CACGGGGATG GAAACTACAT TATCTGTTGG GATTCAGTTT TGCTTGATGA GAACTTGTCT 98977 || || |||| |||||||||| ||| ||||| |||||||||| ||||| ||| ||| | | || CATGGAGATG GAAACTACAT CATCCGTTGG GATTCAGTTT CGCTTGGTGA GAATTGGACT 361 TATGAGGAGG AGCCTGTTGC TATTTTAGAT AGAGAAGTTC GCAAGTTGAG GTCAAGAGAG 99037 |||||||||| | || ||||| |||||||||| ||||| |||| |||||||||| ||| ||||| TATGAGGAGG AACCAGTTGC TATTTTAGAT AGAGAGGTTC GCAAGTTGAG GTCGAGAGAA 421 ATTGCATCCA TCAAGGTGCA ATGGAAGAAT CGACCGGTTG AAGAAGCCAC TTGGGAGAAG 99097 |||||||||| |||| || || |||||||||| |||||||||| ||||||| || |||||||||| ATTGCATCCA TCAAAGTTCA ATGGAAGAAT CGACCGGTTG AAGAAGCTAC TTGGGAGAAG 481 GAGGCGGATA TGCGAGAAAG ATACATACAT CTGTTTAAAG ATTCAGGTAC TCCTTTTCGC 99157 ||||| |||| ||| ||||| |||| |||| ||||||| || |||||||||| |||||||||| GAGGCAGATA TGCAAGAAAA ATACCCACAT CTGTTTACAG ATTCAGGTAC TCCTTTTCGC 541 CCTTGTTTTC CTTCTTTTGA TCGTTCGGGG ATGAACGATG GGTAAATTGG TATCTAATGT 99217 | ||||||| |||| ||||| |||||||||| | |||||||| |||||||||| |||||| ||| CATTGTTTTT CTTCATTTGA TCGTTCGGGG ACGAACGATG GGTAAATTGG TATCTATTGT 601 AACGACCCGT TTAGTCGTTT TGAGCGGCAG ACTTTATTTT TGGAAAAACT GGCAGAAGCG 99277 ||||||| || |||||||||| ||||| |||| | |||| || |||||||||| ||| | | AACGACCTGT TTAGTCGTTT TGAGCAGCAG ATTTTAATTC TGGAAAAACT GGCCAAGACC 661 ACGGACCCCA CGACGGACCA TCATGGGCAC GACGGACCGT CGCAGG-GTC TCGTTTCAAA 99336 |||| | | ||||||||| ||| ||||| ||||| |||| || ||| | |||||||| ACGGGCACTG CGACGGACCG TCACAGGCAC GACGGCCCGT CGAAGGTGCA TCGTTTCAGC 721 ACACTTAGAA AATCTGAAAT TGGGTACTAA AAATCGACTC TCT 99379 | |||||||| |||||| | ||| || | | |||||||||| ||| ATACTTAGAA TTTCTGAATT TGGATA-TGA AAATCGACTC TCT 763 hqPGS_C10HBa0115K16.1+_SGN-E354383+ (98618 99379) ******************************************************************************** EST sequence 242 -strand 548 n (File: SGN-E356257-) 1 GTTAACTAGA AAATTAAAGT GATAGAGTCA AATAATGTAA CGACCCGTTT AGTCGTTTTG 61 AGCAGCAGAC TTTATTTCTG GAAAAACTGG CAGAAGCGAC GGACCCCACG ACGGACCGTC 121 ATGGGCACGA CGGACCATCG CAGGGTCTCG TTTCAAAACC CTCTTTCTTT TACCCCAAAT 181 TAACATATAA TTAAGAATAA AAGATGGCAA TAATACCCCA CTAATTAACT TAGGGTTACC 241 TCTTTTAACC CCAAGAATTT GAGTTATTAA TATAAACCCA CGAAATCTAT AATTAAGGAA 301 AGAATAGTCC AAAAACGTCC CTTAAAACGT GTAAGGAAAT CCGATTCTGC CTGGGATTTG 361 CGCAACCTGT GACGGGCCGT CGTGACTGTG ACGGTCCGTC CTGCAGGTCG TCGCAAGGGT 421 CAGAGAGTCA ATTTCCACTG AACAATCTAT GACGGTCCGT CACGCCTGTG ATGGTCCGTC 481 CTGTCATTCC GTCACGAAGT TCAGAGAGTC GATTTTCAGT ACCCAATTTC AGATTTTCTA 541 AGTGTTTT Predicted gene structure (within gDNA segment 98282 to 103828): Exon 1 99212 99341 ( 130 n); cDNA 33 162 ( 130 n); score: 0.962 MATCH C10HBa0115K16.1+ SGN-E356257- 0.962 130 0.237 C PGS_C10HBa0115K16.1+_SGN-E356257- (99212 99341) Alignment (genomic DNA sequence = upper lines): TAATGTAACG ACCCGTTTAG TCGTTTTGAG CGGCAGACTT TATTTTTGGA AAAACTGGCA 99271 |||||||||| |||||||||| |||||||||| | |||||||| ||||| |||| |||||||||| TAATGTAACG ACCCGTTTAG TCGTTTTGAG CAGCAGACTT TATTTCTGGA AAAACTGGCA 92 GAAGCGACGG ACCCCACGAC GGACCATCAT GGGCACGACG GACCGTCGCA GGGTCTCGTT 99331 |||||||||| |||||||||| ||||| |||| |||||||||| |||| ||||| |||||||||| GAAGCGACGG ACCCCACGAC GGACCGTCAT GGGCACGACG GACCATCGCA GGGTCTCGTT 152 TCAAAACACT 99341 ||||||| || TCAAAACCCT 162 hqPGS_C10HBa0115K16.1+_SGN-E356257- (99212 99341) ******************************************************************************** EST sequence 1 +strand 605 n (File: SGN-E347579+) 1 AATAAAGAAA ATAGAAAGAA CAAGAGAGAG AGGAAGAATC GAACGAGAAG GGAGAAACAA 61 AGCTTGGAGA AAAATTTGCT TGCTTGATCA CTAATCTTCG GTGGAGGTAG GTTATGGTTT 121 TCATGCTTTC ATAGTAAACT CTTAATAGAG AATGATATGT ATTGGTAGTA TTGTAAACCC 181 TGCTATATGC TTAATTGTAT GCATGCATGA ACGTGATTAT ATAATTGTGA TTATATTAAG 241 CATGATGAAG TTATTGAATC CCAAATCTTG ATAAAAATCT AATCTCTTAT TAATGATGAT 301 GCCTTGGTAT AGAAGAAGGC TTGATGAATA AAAGTAATGG GATTGATGAT GCCTTGGTAT 361 AGAGAAGGCC TGATGATTTA CAGAATGATA TTAGTGGATC GGAGTGTCAC GTACCGACAC 421 ATGCAGGGGA TCGGGTGTCA CGAACCGACA CGTAGAATTA GGGGATCGGG TGTCACGAAC 481 TGGCACGTAG AATTAGGGGA TCGGGTGTCA CGAACCGGCA CGTAGATTAG GGGATCAGGT 541 GTCACGAACC GACACGTAGA ATTAGGGGAT CGGGTGTCAC GAACCGACAC GTAGAATTAG 601 GGGAT Predicted gene structure (within gDNA segment 99109 to 100824): Exon 1 99709 100129 ( 421 n); cDNA 1 420 ( 420 n); score: 0.913 Intron 1 100130 100168 ( 39 n); Pd: 0.000 (s: 0.81), Pa: 0.000 (s: 0.94) Exon 2 100169 100354 ( 186 n); cDNA 421 605 ( 185 n); score: 0.957 MATCH C10HBa0115K16.1+ SGN-E347579+ 0.927 607 1.003 C PGS_C10HBa0115K16.1+_SGN-E347579+ (99709 100129,100169 100354) Alignment (genomic DNA sequence = upper lines): AATAAAGAAA ATAGAAAGAA CAAGAGAGAG AGGGAGAATC GAACGAGAAG GGAGAAACAA 99768 |||||||||| |||||||||| |||||||||| ||| |||||| |||||||||| |||||||||| AATAAAGAAA ATAGAAAGAA CAAGAGAGAG AGGAAGAATC GAACGAGAAG GGAGAAACAA 60 AGCTTGGAGA AAGATTTGCT TGCTTGATCA CTAATCTTCG GTGGAGGTAG GTTATGGTTT 99828 |||||||||| || ||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGCTTGGAGA AAAATTTGCT TGCTTGATCA CTAATCTTCG GTGGAGGTAG GTTATGGTTT 120 TCATGCTTTC ATAGTAAACT CTTAATAGAG AATGATATGT ATTGGTAGTA TTGTAAACCC 99888 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCATGCTTTC ATAGTAAACT CTTAATAGAG AATGATATGT ATTGGTAGTA TTGTAAACCC 180 TACTATATGC TTAATTGTAT GTTTGCGTGA ATATGATTAT GTGATTGTGA TAAGA-TAAG 99947 | |||||||| |||||||||| | ||| ||| | ||||||| | ||||||| | | | |||| TGCTATATGC TTAATTGTAT GCATGCATGA ACGTGATTAT ATAATTGTGA TTATATTAAG 240 CATGATTAAA ATATTGAATC CCAAATCTTG AAAGGAAACT TTAATATACA TTATTAATGA 100007 |||||| || ||||||||| |||||||||| | | ||| | |||| | | |||||||||| CATGATGAAG TTATTGAATC CCAAATCTTG ATA--AAAAT CTAATCT-C- TTATTAATGA 296 TGATGCCTTG GTATAGAAGA AGGCTTGATG AATTAAAGTA ATGGGATTGA TGATGCCTTG 100067 |||||||||| |||||||||| |||||||||| ||| |||||| |||||||||| |||||||||| TGATGCCTTG GTATAGAAGA AGGCTTGATG AATAAAAGTA ATGGGATTGA TGATGCCTTG 356 GAATAGAGAA GGCCTGATGA TTTACAGAAT GAT-GTAGGG GACCGG-GTG TCACGAACCG 100125 | |||||||| |||||||||| |||||||||| ||| ||| | || ||| ||| ||||| |||| GTATAGAGAA GGCCTGATGA TTTACAGAAT GATATTAGTG GATCGGAGTG TCACGTACCG 416 ACACGTAGAA TTAGGGGATC GGGTGTCACG AACCGACACG TAGAATTAGG GGATCGGGTG 100185 |||| | ||| |||||||||| ACAC...... .......... .......... .......... ...ATGCAGG GGATCGGGTG 437 TCACGAACCG ACACGTAGAA TTAGGGGATC GGGTGTCACG AACTGACACG TAGAATTAGG 100245 |||||||||| |||||||||| |||||||||| |||||||||| ||||| |||| |||||||||| TCACGAACCG ACACGTAGAA TTAGGGGATC GGGTGTCACG AACTGGCACG TAGAATTAGG 497 GGATCGGGTG TCACAAACCG ACACGTAGAA TTAGGGGATC GGGTGTCACG AACCGACACG 100305 |||||||||| |||| ||||| ||||||| | |||||||||| ||||||||| |||||||||| GGATCGGGTG TCACGAACCG GCACGTAG-A TTAGGGGATC AGGTGTCACG AACCGACACG 556 TAGAATTAGG GGATCGGGTG TCACGAACCG ACACGTAGAA TTAGGGGAT 100354 |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| TAGAATTAGG GGATCGGGTG TCACGAACCG ACACGTAGAA TTAGGGGAT 605 hqPGS_C10HBa0115K16.1+_SGN-E347579+ (99709 100129,100169 100354) ******************************************************************************** EST sequence 36 +strand 542 n (File: SGN-E252199+) 1 CTTGATGAGA ATTTGTCTTA TGAGGAGGAG CCTGTTGCCA TTTTAGATAG AGAAGTCCGC 61 AAATTGAGGT CAAGGGAGAT TGCATCTATC AAAGTTCAAT GGAAGAATCG ACCAGTTGAA 121 GAATCCACTT GGGAGAAGGA AGTTGATATG CGAGAAAGAT ACCCATACCT GTTTACAGAT 181 TCAGGTACTC CTTTTCGCCC TTGTTTTTCT TCTTGTGATC GTTCGGGGAC GAACGATGGG 241 TAAATTGGTA TCTATTGTAA CGACCTGTTT AGTCGTTTTG AGTAACAGAT TTTATTTCTG 301 GAAAAACTGA CTGAGACGAC GGATCCCACG ACGGACCGTC GAGGGGGTCT CGTTCCAAAA 361 CACTTAGAAT TCTGAAATTT GGGTACTGAA ATCGACTCTC TGAACTTCGT GACGGAATGG 421 CAGGACGGAC CGTCACAGGC GTGATGGGCC GTCACAGACC CTTGGTAAAA ATCTAGTCTC 481 TGAACTCTGT GACGGACGTG CAGGACGGAC CGTCACAGAC TGCGTAATCC CAGGCTGGGT 541 CG Predicted gene structure (within gDNA segment 98252 to 101102): Exon 1 98960 99416 ( 457 n); cDNA 1 438 ( 438 n); score: 0.868 MATCH C10HBa0115K16.1+ SGN-E252199+ 0.868 457 0.843 C PGS_C10HBa0115K16.1+_SGN-E252199+ (98960 99416) Alignment (genomic DNA sequence = upper lines): CTTGATGAGA ACTTGTCTTA TGAGGAGGAG CCTGTTGCTA TTTTAGATAG AGAAGTTCGC 99019 |||||||||| | |||||||| |||||||||| |||||||| | |||||||||| |||||| ||| CTTGATGAGA ATTTGTCTTA TGAGGAGGAG CCTGTTGCCA TTTTAGATAG AGAAGTCCGC 60 AAGTTGAGGT CAAGAGAGAT TGCATCCATC AAGGTGCAAT GGAAGAATCG ACCGGTTGAA 99079 || ||||||| |||| ||||| |||||| ||| || || |||| |||||||||| ||| |||||| AAATTGAGGT CAAGGGAGAT TGCATCTATC AAAGTTCAAT GGAAGAATCG ACCAGTTGAA 120 GAAGCCACTT GGGAGAAGGA GGCGGATATG CGAGAAAGAT ACATACATCT GTTTAAAGAT 99139 ||| |||||| |||||||||| | |||||| |||||||||| || | | || ||||| |||| GAATCCACTT GGGAGAAGGA AGTTGATATG CGAGAAAGAT ACCCATACCT GTTTACAGAT 180 TCAGGTACTC CTTTTCGCCC TTGTTTTCCT TCTTTTGATC GTTCGGGGAT GAACGATGGG 99199 |||||||||| |||||||||| ||||||| || |||| ||||| ||||||||| |||||||||| TCAGGTACTC CTTTTCGCCC TTGTTTTTCT TCTTGTGATC GTTCGGGGAC GAACGATGGG 240 TAAATTGGTA TCTAATGTAA CGACCCGTTT AGTCGTTTTG AGCGGCAGAC TTTATTTTTG 99259 |||||||||| |||| ||||| ||||| |||| |||||||||| || |||| ||||||| || TAAATTGGTA TCTATTGTAA CGACCTGTTT AGTCGTTTTG AGTAACAGAT TTTATTTCTG 300 GAAAAACTGG CAGAAGCGAC GGACCCCACG ACGGACCATC ATGGGCACGA CGGACCGTCG 99319 ||||||||| | || |||| ||| |||||| |||| | | || | || | | GAAAAACTGA CTGAGACGAC GGATCCCACG ACGG------ A----C-CGT C-GA--G--G 344 CAGGGTCTCG TTTCAAAACA CTTAGAAAAT CTGAAA-TTG GGTACTAAAA ATCGACTCTC 99378 |||||||| || ||||||| ||||| || | |||||| ||| |||||| || |||||||||| --GGGTCTCG TTCCAAAACA CTTAG-AATT CTGAAATTTG GGTACT-GAA ATCGACTCTC 400 TGAACTTTGT GACGGAATGG CAGGACGGAC CGTCACAG 99416 ||||||| || |||||||||| |||||||||| |||||||| TGAACTTCGT GACGGAATGG CAGGACGGAC CGTCACAG 438 hqPGS_C10HBa0115K16.1+_SGN-E252199+ (98960 99416) ******************************************************************************** EST sequence 50 +strand 519 n (File: SGN-E374998+) 1 TTTTTTTTTA TGAATTAGCT CAATGAAAAA TGAGTAAATT TTTTATATTT TATGGCATAA 61 TTTTTTCATT AATTCATGGT TGAGAAAATC TTTGTTTCTA ATAGTGTTAT AAATCGTAAA 121 ATAATAATAA TATTTAAGTA GGAAGAACAT AAATGTAACG ACCTGTTTAG TCGTTTTGAG 181 TAGCAGATTT TATTTTTGGA AAAACAGGTT GAGACGACGG AACCCACGAC GGACCGTCAT 241 GAGCACGATG GACCGTCGAG GAGTCTCGTT TCAAAACACT TAGAAATTCT GAAATTGGGT 301 ACTAAAAATC GACTCTCTGA ACTTCGTAAC GGAATGGCAC GACGGACCGT CACGGGCGTG 361 ACGGACCGTC ACAGACTCTT TGGTGGAAAT TGAGTCTCTG AACCTTGCGA CGACCTGCAG 421 GACGGACCGT CGCAGGCACG ACGGGCCATC ACAGGTTGCG TAATCCCAGT CTGGGTCGGA 481 TTTCTTTTAC ACGTTTTAAG GGACGTTATG TACTATTCC Predicted gene structure (within gDNA segment 96986 to 100846): Exon 1 99213 99420 ( 208 n); cDNA 152 359 ( 208 n); score: 0.885 Intron 1 99421 99462 ( 42 n); Pd: 0.000 (s: 0.86), Pa: 0.000 (s: 0) Exon 2 99463 99477 ( 15 n); cDNA 360 374 ( 15 n); score: 0.933 Intron 2 99478 99800 ( 323 n); Pd: 0.000 (s: 0), Pa: 0.000 (s: 0) Exon 3 99801 99813 ( 13 n); cDNA 375 387 ( 13 n); score: 0.846 PPA cDNA 11 1 MATCH C10HBa0115K16.1+ SGN-E374998+ 0.885 236 0.455 C PGS_C10HBa0115K16.1+_SGN-E374998+ (99213 99420,99463 99477,99801 99813) Alignment (genomic DNA sequence = upper lines): AATGTAACGA CCCGTTTAGT CGTTTTGAGC GGCAGACTTT ATTTTTGGAA AAACTGGCAG 99272 |||||||||| || ||||||| ||||||||| ||||| ||| |||||||||| |||| || | AATGTAACGA CCTGTTTAGT CGTTTTGAGT AGCAGATTTT ATTTTTGGAA AAACAGGTTG 211 AAGCGACGGA CCCCACGACG GACCATCATG GGCACGACGG ACCGTCGCAG GGTCTCGTTT 99332 | ||||||| ||||||||| |||| ||||| |||||| || ||||||| | ||||||||| AGACGACGGA ACCCACGACG GACCGTCATG AGCACGATGG ACCGTCGAGG AGTCTCGTTT 271 CAAAACACTT AGAAAATCTG AAATTGGGTA CTAAAAATCG ACTCTCTGAA CTTTGTGACG 99392 |||||||||| ||||| |||| |||||||||| |||||||||| |||||||||| ||| || ||| CAAAACACTT AGAAATTCTG AAATTGGGTA CTAAAAATCG ACTCTCTGAA CTTCGTAACG 331 GAATGGCAGG ACGGACCGTC ACAGACCCGT GGTGGAAATT TGGGTCTCTA AACTCTACGA 99452 |||||||| | |||||||||| || | | GAATGGCACG ACGGACCGTC ACGGGCGT.. .......... .......... .......... 359 CGACCTGCAG GACGGACCGT CGCAGGCACG ACGGCCCGTC AAAGGTTGCG CAAATCCCAG 99512 |||||||||| | ||| .......... GACGGACCGT CACAG..... .......... .......... .......... 374 GCAGAGTCGG ATTTCTGGTT AAGTTTTAAG GGACGTTTTT GACTATTCTT GCCTTAATTA 99572 .......... .......... .......... .......... .......... .......... 374 TAAAGTTCGT GGGTTTATAT TAATAACTCA AATTCTGGAG GGGTTAAAAG AGGTAACCCT 99632 .......... .......... .......... .......... .......... .......... 374 AAGTTAATTA GTGGGGTATT ATTGCCATCT TTTATTCTTA ATTATATACT AATTAGGGTA 99692 .......... .......... .......... .......... .......... .......... 374 AAAGAAAGAG GGTTGGAATA AAGAAAATAG AAAGAACAAG AGAGAGAGGG AGAATCGAAC 99752 .......... .......... .......... .......... .......... .......... 374 GAGAAGGGAG AAACAAAGCT TGGAGAAAGA TTTGCTTGCT TGATCACTAA TCTTCGGTGG 99812 | |||| ||||| .......... .......... .......... .......... ........AC TCTTTGGTGG 386 A 99813 | A 387 hqPGS_C10HBa0115K16.1+_SGN-E374998+ (99213 99420) ******************************************************************************** EST sequence 60 +strand 525 n (File: SGN-E396069+) 1 TTTTTTTTTT ATGAATTAGC TCAATGAAAA ATGAGTAAAT TTTTTATATT TTATGGCATA 61 ATTTTTTCAT TAATTCATGG TTGAGAAAAT CTTTGTTTCT AATAGTGTTA TAAATCGTAA 121 AATAATAATA ATATTTAAGT AGGAAGAACA TAAATGTAAC GACCTGTTTA GTCGTTTTGA 181 GTAGCAGATT TTATTTTTGG AAAAACAGGT TGAGACGACG GAACCCACGA CGGACCGTCA 241 TGAGCACGAT GGACCGTCGA GGAGTCTCGT TTCAAAACAC TTAGAAATTC TGAAATTGGG 301 TACTAAAAAT CGACTCTCTG AACTTCGTAA CGGAATGGCA CGACGGACCG TCACGGGCGT 361 GACGGACCGT CACAGACTCT TTGGTGGAAA TTGAGTCTCT GAACCTTGCG ACGACCTGCA 421 GGACGGACCG TCGCAGGCAC GACGGGCCAT CACAGGTTGC GTAATCCCGG TGGGGGTCGG 481 ATTTCTTTAC ACGTTTTAAG GGACGTTTTG GACTATTCCT ACTTT Predicted gene structure (within gDNA segment 96976 to 100896): Exon 1 99213 99420 ( 208 n); cDNA 153 360 ( 208 n); score: 0.885 Intron 1 99421 99462 ( 42 n); Pd: 0.000 (s: 0.86), Pa: 0.000 (s: 0) Exon 2 99463 99477 ( 15 n); cDNA 361 375 ( 15 n); score: 0.933 Intron 2 99478 99800 ( 323 n); Pd: 0.000 (s: 0), Pa: 0.000 (s: 0) Exon 3 99801 99813 ( 13 n); cDNA 376 388 ( 13 n); score: 0.846 PPA cDNA 12 1 MATCH C10HBa0115K16.1+ SGN-E396069+ 0.885 236 0.450 C PGS_C10HBa0115K16.1+_SGN-E396069+ (99213 99420,99463 99477,99801 99813) Alignment (genomic DNA sequence = upper lines): AATGTAACGA CCCGTTTAGT CGTTTTGAGC GGCAGACTTT ATTTTTGGAA AAACTGGCAG 99272 |||||||||| || ||||||| ||||||||| ||||| ||| |||||||||| |||| || | AATGTAACGA CCTGTTTAGT CGTTTTGAGT AGCAGATTTT ATTTTTGGAA AAACAGGTTG 212 AAGCGACGGA CCCCACGACG GACCATCATG GGCACGACGG ACCGTCGCAG GGTCTCGTTT 99332 | ||||||| ||||||||| |||| ||||| |||||| || ||||||| | ||||||||| AGACGACGGA ACCCACGACG GACCGTCATG AGCACGATGG ACCGTCGAGG AGTCTCGTTT 272 CAAAACACTT AGAAAATCTG AAATTGGGTA CTAAAAATCG ACTCTCTGAA CTTTGTGACG 99392 |||||||||| ||||| |||| |||||||||| |||||||||| |||||||||| ||| || ||| CAAAACACTT AGAAATTCTG AAATTGGGTA CTAAAAATCG ACTCTCTGAA CTTCGTAACG 332 GAATGGCAGG ACGGACCGTC ACAGACCCGT GGTGGAAATT TGGGTCTCTA AACTCTACGA 99452 |||||||| | |||||||||| || | | GAATGGCACG ACGGACCGTC ACGGGCGT.. .......... .......... .......... 360 CGACCTGCAG GACGGACCGT CGCAGGCACG ACGGCCCGTC AAAGGTTGCG CAAATCCCAG 99512 |||||||||| | ||| .......... GACGGACCGT CACAG..... .......... .......... .......... 375 GCAGAGTCGG ATTTCTGGTT AAGTTTTAAG GGACGTTTTT GACTATTCTT GCCTTAATTA 99572 .......... .......... .......... .......... .......... .......... 375 TAAAGTTCGT GGGTTTATAT TAATAACTCA AATTCTGGAG GGGTTAAAAG AGGTAACCCT 99632 .......... .......... .......... .......... .......... .......... 375 AAGTTAATTA GTGGGGTATT ATTGCCATCT TTTATTCTTA ATTATATACT AATTAGGGTA 99692 .......... .......... .......... .......... .......... .......... 375 AAAGAAAGAG GGTTGGAATA AAGAAAATAG AAAGAACAAG AGAGAGAGGG AGAATCGAAC 99752 .......... .......... .......... .......... .......... .......... 375 GAGAAGGGAG AAACAAAGCT TGGAGAAAGA TTTGCTTGCT TGATCACTAA TCTTCGGTGG 99812 | |||| ||||| .......... .......... .......... .......... ........AC TCTTTGGTGG 387 A 99813 | A 388 hqPGS_C10HBa0115K16.1+_SGN-E396069+ (99213 99420) ******************************************************************************** EST sequence 90 +strand 402 n (File: SGN-E357559+) 1 TAGTCTTCGG TGGAGGTAGG TTATTGTTTC TCTTACGATA TTCGTAGTAA ACTCTTAATA 61 GAGAATGATA TGTATTGATA ATATTGTAAA CCCTGCTATG TGCTTAATTG TATGCTTGCA 121 TGAATGTAAC TATATAATTG TTATTATATA AGCATGATGA AGTTATTGAA TCCCAAATCT 181 TGTAAAAACC TAATCTCTTT TTAATGATGA TGCCTTGGTA AGGGAGAAGG CTTGATGAAC 241 TAAAGTAATG AGATTGATGA TGCCTTGGTA AGGGAGAAGG CTTGATGAAT TGATAGAATG 301 AGATTAGGGG ATCGGGTGTC ACGAACTGAC ACGTAGAATT AGGGGATCGG GTGTCACAAA 361 CCGACACGTA GATTAAGGGA TCAGGTGTCA CGAACCAACA CA Predicted gene structure (within gDNA segment 98800 to 101208): Exon 1 99800 100099 ( 300 n); cDNA 1 301 ( 301 n); score: 0.813 Intron 1 100100 100203 ( 104 n); Pd: 0.000 (s: 0.79), Pa: 0.000 (s: 0.98) Exon 2 100204 100304 ( 101 n); cDNA 302 401 ( 100 n); score: 0.950 MATCH C10HBa0115K16.1+ SGN-E357559+ 0.848 401 0.998 C PGS_C10HBa0115K16.1+_SGN-E357559+ (99800 100099,100204 100304) Alignment (genomic DNA sequence = upper lines): TAATCTTCGG TGGAGGTAGG TTATGGTTT- TC--ATGCT- TTCATAGTAA ACTCTTAATA 99855 || ||||||| |||||||||| |||| |||| || | | | ||| |||||| |||||||||| TAGTCTTCGG TGGAGGTAGG TTATTGTTTC TCTTACGATA TTCGTAGTAA ACTCTTAATA 60 GAGAATGATA TGTATTGGTA GTATTGTAAA CCCTACTATA TGCTTAATTG TATGTTTGCG 99915 |||||||||| ||||||| || ||||||||| |||| |||| |||||||||| |||| |||| GAGAATGATA TGTATTGATA ATATTGTAAA CCCTGCTATG TGCTTAATTG TATGCTTGCA 120 TGAATATGAT TATGTGATTG TGATAAGATA AGCATGATTA AAATATTGAA TCCCAAATCT 99975 ||||| | | ||| | |||| | || | ||| |||||||| | | ||||||| |||||||||| TGAATGTAAC TATATAATTG TTATTATATA AGCATGATGA AGTTATTGAA TCCCAAATCT 180 TGAAAGGAAA CTTTAATATA CATTATTAAT GATGATGCCT TGGTATAGAA GAAGGCTTGA 100035 || || ||| | |||| | | || ||||| |||||||||| ||||| | | |||||||||| TGTAA--AAA C-CTAATCT- C-TTTTTAAT GATGATGCCT TGGTAAGGGA GAAGGCTTGA 235 TGAATTAAAG TAATGGGATT GATGATGCCT TGG-AATAGA GAAGGCCTGA TG-ATTTACA 100093 |||| ||||| ||||| |||| |||||||||| ||| || || |||||| ||| || ||| | | TGAACTAAAG TAATGAGATT GATGATGCCT TGGTAAGGGA GAAGGCTTGA TGAATTGATA 295 GAATGATGTA GGGGACCGGG TGTCACGAAC CGACACGTAG AATTAGGGGA TCGGGTGTCA 100153 |||||| GAATGA.... .......... .......... .......... .......... .......... 301 CGAACCGACA CGTAGAATTA GGGGATCGGG TGTCACGAAC CGACACGTAG AATTAGGGGA 100213 ||||||||| .......... .......... .......... .......... .......... GATTAGGGGA 311 TCGGGTGTCA CGAACTGACA CGTAGAATTA GGGGATCGGG TGTCACAAAC CGACACGTAG 100273 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCGGGTGTCA CGAACTGACA CGTAGAATTA GGGGATCGGG TGTCACAAAC CGACACGTAG 371 AATTAGGGGA TCGGGTGTCA CGAACCGACA C 100304 |||| |||| || ||||||| |||||| ||| | -ATTAAGGGA TCAGGTGTCA CGAACCAACA C 401 hqPGS_C10HBa0115K16.1+_SGN-E357559+ (99800 100099,100204 100304) ******************************************************************************** EST sequence 56 +strand 647 n (File: SGN-E396055+) 1 TTTTTTTTTT ATGAATTAGC TCAATGAAAA ATGAGTAAAT TTTTTATATT TTATGGCATA 61 ATTTTTTCAT TAATTCATGG TTGAGAAAAT CTTTGTTTCT AATAGTGTTA TAAATCGTAA 121 AATAATAATA ATATTTAAGT AGGAAGAACA TAAATGTAAC GACCTGTTTA GTCGTTTTGA 181 GTAGCAGATT TTATTTTTGG AAAAACAGGT TGAGACGACG GAACCCACGA CGGACCGTCA 241 TGAGCACGAT GGACCGTCGA GGAGTCTCGT TTCAAAACAC TTAGAAATTC TGAAATTGGG 301 TACTAAAAAT CGACTCTCTG AACTTCGTAA CGGAATGGCA CGACGGACCG TCACGGGCGT 361 GACGGACCGT CACAGACTCT TTGGTGGAAA TTGAGTCTCT GAACCTTGCG ACGACCTGCA 421 GGACGGACCG TCGCAGGCAC GACGGGCCAT CACAGGTTGC GTAATCCCAG TCTGGGTCGG 481 ATTTCTTTAC ACGTTTTAAG GGACGTTTTG GACTATTCCT ACTTTAATTA TAAAGTTAGT 541 GGGGTTTATG TTAATAAGTC TAATTACCCT GGGGGTTAAA AAAAGGAACC CTTGAGTAAA 601 TTAGTGGGTT ATTATTTCCA TCTTTTTATT CTTAATTATA TGCTAAT Predicted gene structure (within gDNA segment 96976 to 102116): Exon 1 99213 99685 ( 473 n); cDNA 153 647 ( 495 n); score: 0.748 PPA cDNA 12 1 MATCH C10HBa0115K16.1+ SGN-E396055+ 0.748 473 0.731 C PGS_C10HBa0115K16.1+_SGN-E396055+ (99213 99685) Alignment (genomic DNA sequence = upper lines): AATGTAACGA CCCGTTTAGT CGTTTTGAGC GGCAGACTTT ATTTTTGGAA AAACTGGCAG 99272 |||||||||| || ||||||| ||||||||| ||||| ||| |||||||||| |||| || | AATGTAACGA CCTGTTTAGT CGTTTTGAGT AGCAGATTTT ATTTTTGGAA AAACAGGTTG 212 AAGCGACGGA CCCCACGACG GACCATCATG GGCACGACGG ACCGTCGCAG GGTCTCGTTT 99332 | ||||||| ||||||||| |||| ||||| |||||| || ||||||| | ||||||||| AGACGACGGA ACCCACGACG GACCGTCATG AGCACGATGG ACCGTCGAGG AGTCTCGTTT 272 CAAAACACTT AGAAAATCTG AAATTGGGTA CTAAAAATCG ACTCTCTGAA CTTTGTGACG 99392 |||||||||| ||||| |||| |||||||||| |||||||||| |||||||||| ||| || ||| CAAAACACTT AGAAATTCTG AAATTGGGTA CTAAAAATCG ACTCTCTGAA CTTCGTAACG 332 GAATGGCAGG ACGGACCGTC A----C---A --GA-C--C- C-G------T GGTGGAAATT 99432 |||||||| | |||||||||| | | | || | | | | | |||||||| | GAATGGCACG ACGGACCGTC ACGGGCGTGA CGGACCGTCA CAGACTCTTT GGTGGAAA-T 391 TGGGTCTCTA AACTCTACGA CGACCTGCAG GACGGACCGT CGCAGGCACG ACGGCCCGTC 99492 || |||||| ||| | ||| |||||||||| |||||||||| |||||||||| |||| || || TGAGTCTCTG AACCTTGCGA CGACCTGCAG GACGGACCGT CGCAGGCACG ACGGGCCATC 451 AAAGGTTGCG CAAATCCCAG GCAGAGTCGG ATTTCTGGTT AAGTTTTAAG GGACGTTTTT 99552 | |||||||| |||||||| | | ||||| |||||| | |||||||| ||||||||| ACAGGTTGCG -TAATCCCAG TCTGGGTCGG ATTTCTTTAC ACGTTTTAAG GGACGTTTTG 510 GACTATTCTT GCCTTAATTA TAAAGTTCGT -GGGTTTATA TTAATAACTC AAATT-CTGG 99610 |||||||| | | ||||||| ||||||| || |||||||| ||||||| || |||| | GACTATTCCT ACTTTAATTA TAAAGTTAGT GGGGTTTATG TTAATAAGTC TAATTACCCT 570 AGGGGTTAAA AGAGGTAACC C-TAAGTTAA TTAGTGGGGT ATTATTGCCA TC-TTTTATT 99668 ||||||||| | | | |||| | | ||| || |||||||| | |||||| ||| || ||||||| GGGGGTTAAA AAAAGGAACC CTTGAGTAAA TTAGTGGGTT ATTATTTCCA TCTTTTTATT 630 CTTAATTATA TACTAAT 99685 |||||||||| | ||||| CTTAATTATA TGCTAAT 647 hqPGS_C10HBa0115K16.1+_SGN-E396055+ (99213 99685) ******************************************************************************** EST sequence 54 +strand 640 n (File: SGN-E398551+) 1 TTTTTTTTTT ATGAATTAGC TCAATGAAAA ATGAGTAAAT TTTTTATATT TTATGGCATA 61 ATTTTTTCAT TAATTCATGG TTGAGAAAAT CTTTGTTTCT AATAGTGTTA TAAATCGTAA 121 AATAATAATA ATATTTAAGT AGGAAGAACA TAAATGTAAC GACCTGTTTA GTCGTTTTGA 181 GTAGCAGATT TTATTTTTGG AAAAACAGGT TGAGACGACG GAACCCACGA CGGACCGTCA 241 TGAGCACGAT GGACCGTCGA GGAGTCTCGT TTCAAAACAC TTAGAAATTC TGAAATTGGG 301 TACTAAAAAT CGACTCTCTG AACTTCGTAA CGGAATGGCA CGACGGACCG TCACGGGCGT 361 GACGGACCGT CACAGACTCT TTGGTGGAAA TTGAGTCTCT GAACCTTGCG ACGACCTGCA 421 GGACGGACCG TCGCAGGCAC GACGGGCCAT CACAGGTTGC GTAATCCCAG TCTGGGTCGG 481 ATTTCTTTAC ACGTTTTAAG GGACGTTTTG GACTATTCCT ACTTTAATTA TAAAGTTAGT 541 GGGTTTATGT TAATAAGTCT AATTACCTGG GGGTTAAAAG AGGTAACCTT GAGTAAATTA 601 TTGGGTTATT ATTCCATCTT TTATTCTTAA TTATATGCTA Predicted gene structure (within gDNA segment 96976 to 102046): Exon 1 99213 99683 ( 471 n); cDNA 153 640 ( 488 n); score: 0.769 PPA cDNA 12 1 MATCH C10HBa0115K16.1+ SGN-E398551+ 0.769 471 0.736 C PGS_C10HBa0115K16.1+_SGN-E398551+ (99213 99683) Alignment (genomic DNA sequence = upper lines): AATGTAACGA CCCGTTTAGT CGTTTTGAGC GGCAGACTTT ATTTTTGGAA AAACTGGCAG 99272 |||||||||| || ||||||| ||||||||| ||||| ||| |||||||||| |||| || | AATGTAACGA CCTGTTTAGT CGTTTTGAGT AGCAGATTTT ATTTTTGGAA AAACAGGTTG 212 AAGCGACGGA CCCCACGACG GACCATCATG GGCACGACGG ACCGTCGCAG GGTCTCGTTT 99332 | ||||||| ||||||||| |||| ||||| |||||| || ||||||| | ||||||||| AGACGACGGA ACCCACGACG GACCGTCATG AGCACGATGG ACCGTCGAGG AGTCTCGTTT 272 CAAAACACTT AGAAAATCTG AAATTGGGTA CTAAAAATCG ACTCTCTGAA CTTTGTGACG 99392 |||||||||| ||||| |||| |||||||||| |||||||||| |||||||||| ||| || ||| CAAAACACTT AGAAATTCTG AAATTGGGTA CTAAAAATCG ACTCTCTGAA CTTCGTAACG 332 GAATGGCAGG ACGGACCGTC A----C---A --GA-C--C- C-G------T GGTGGAAATT 99432 |||||||| | |||||||||| | | | || | | | | | |||||||| | GAATGGCACG ACGGACCGTC ACGGGCGTGA CGGACCGTCA CAGACTCTTT GGTGGAAA-T 391 TGGGTCTCTA AACTCTACGA CGACCTGCAG GACGGACCGT CGCAGGCACG ACGGCCCGTC 99492 || |||||| ||| | ||| |||||||||| |||||||||| |||||||||| |||| || || TGAGTCTCTG AACCTTGCGA CGACCTGCAG GACGGACCGT CGCAGGCACG ACGGGCCATC 451 AAAGGTTGCG CAAATCCCAG GCAGAGTCGG ATTTCTGGTT AAGTTTTAAG GGACGTTTTT 99552 | |||||||| |||||||| | | ||||| |||||| | |||||||| ||||||||| ACAGGTTGCG -TAATCCCAG TCTGGGTCGG ATTTCTTTAC ACGTTTTAAG GGACGTTTTG 510 GACTATTCTT GCCTTAATTA TAAAGTTCGT GGGTTTATAT TAATAACTCA AATTCTGGAG 99612 |||||||| | | ||||||| ||||||| || |||||||| | |||||| || |||| | GACTATTCCT ACTTTAATTA TAAAGTTAGT GGGTTTATGT TAATAAGTCT AATTACCTGG 570 GGGTTAAAAG AGGTAACCCT AAGTTAATTA GTGGGGTATT ATTGCCATCT TTTATTCTTA 99672 |||||||||| |||||||| | ||| ||||| |||| |||| ||| |||||| |||||||||| GGGTTAAAAG AGGTAACCTT GAGTAAATTA TTGGGTTATT ATT-CCATCT TTTATTCTTA 629 ATTATATACT A 99683 ||||||| || | ATTATATGCT A 640 hqPGS_C10HBa0115K16.1+_SGN-E398551+ (99213 99683) ******************************************************************************** EST sequence 52 +strand 630 n (File: SGN-E396038+) 1 TTTTTTTTTT ATTATTTAAC TCTATGAAAA ATGAGTAAAT TTTTTATATT TTATGGCATA 61 ATTTTTTCAT TAATTCATGG TTGAGAAAAT CTTTGTTTCT AATAGTGTTA TAAATCGTAA 121 AATAATAATA ATATTTAAGT AGGAAGAACA TAAATGTAAC GACCTGTTTA GTCGTTTTGA 181 GTAGCAGATT TTATTTTTGG AAAAACAGGT TGAGACGACG GAACCCACGA CGGACCGTCA 241 TGAGCACGAT GGACCGTCGA GGAGTCTCGT TTCAAAACAC TTAGAAATTC TGAAATTGGG 301 TACTAAAAAT CGACTCTCTG AACTTCGTAA CGGAATGGCA CGACGGACCG TCACGGGCGT 361 GACGGACCGT CACAGACTCT TTGGTGGAAA TTGAGTCTCT GAACCTTGCG ACGACCTGCA 421 GGACGGACCG TCGCAGGCAC GACGGGCCAT CACAGGTTGC GTAATCCCAG TCTGGGTCGG 481 ATTTCTTTAC ACGTTTTAAG GGACGTTTTG GACTATTCCT ACTTTAATTA TAAAGTTAGT 541 GGGTTTATGT TAATAAGTCT AATTACCTGG GGGTTAAAAG AGGTAACCTT GAGTAAATTA 601 GTGGGTTATT ATTCCATCTT TTATTCTTAA Predicted gene structure (within gDNA segment 96976 to 101946): Exon 1 99213 99673 ( 461 n); cDNA 153 630 ( 478 n); score: 0.768 PPA cDNA 10 1 MATCH C10HBa0115K16.1+ SGN-E396038+ 0.768 461 0.732 C PGS_C10HBa0115K16.1+_SGN-E396038+ (99213 99673) Alignment (genomic DNA sequence = upper lines): AATGTAACGA CCCGTTTAGT CGTTTTGAGC GGCAGACTTT ATTTTTGGAA AAACTGGCAG 99272 |||||||||| || ||||||| ||||||||| ||||| ||| |||||||||| |||| || | AATGTAACGA CCTGTTTAGT CGTTTTGAGT AGCAGATTTT ATTTTTGGAA AAACAGGTTG 212 AAGCGACGGA CCCCACGACG GACCATCATG GGCACGACGG ACCGTCGCAG GGTCTCGTTT 99332 | ||||||| ||||||||| |||| ||||| |||||| || ||||||| | ||||||||| AGACGACGGA ACCCACGACG GACCGTCATG AGCACGATGG ACCGTCGAGG AGTCTCGTTT 272 CAAAACACTT AGAAAATCTG AAATTGGGTA CTAAAAATCG ACTCTCTGAA CTTTGTGACG 99392 |||||||||| ||||| |||| |||||||||| |||||||||| |||||||||| ||| || ||| CAAAACACTT AGAAATTCTG AAATTGGGTA CTAAAAATCG ACTCTCTGAA CTTCGTAACG 332 GAATGGCAGG ACGGACCGTC A----C---A --GA-C--C- C-G------T GGTGGAAATT 99432 |||||||| | |||||||||| | | | || | | | | | |||||||| | GAATGGCACG ACGGACCGTC ACGGGCGTGA CGGACCGTCA CAGACTCTTT GGTGGAAA-T 391 TGGGTCTCTA AACTCTACGA CGACCTGCAG GACGGACCGT CGCAGGCACG ACGGCCCGTC 99492 || |||||| ||| | ||| |||||||||| |||||||||| |||||||||| |||| || || TGAGTCTCTG AACCTTGCGA CGACCTGCAG GACGGACCGT CGCAGGCACG ACGGGCCATC 451 AAAGGTTGCG CAAATCCCAG GCAGAGTCGG ATTTCTGGTT AAGTTTTAAG GGACGTTTTT 99552 | |||||||| |||||||| | | ||||| |||||| | |||||||| ||||||||| ACAGGTTGCG -TAATCCCAG TCTGGGTCGG ATTTCTTTAC ACGTTTTAAG GGACGTTTTG 510 GACTATTCTT GCCTTAATTA TAAAGTTCGT GGGTTTATAT TAATAACTCA AATTCTGGAG 99612 |||||||| | | ||||||| ||||||| || |||||||| | |||||| || |||| | GACTATTCCT ACTTTAATTA TAAAGTTAGT GGGTTTATGT TAATAAGTCT AATTACCTGG 570 GGGTTAAAAG AGGTAACCCT AAGTTAATTA GTGGGGTATT ATTGCCATCT TTTATTCTTA 99672 |||||||||| |||||||| | ||| ||||| ||||| |||| ||| |||||| |||||||||| GGGTTAAAAG AGGTAACCTT GAGTAAATTA GTGGGTTATT ATT-CCATCT TTTATTCTTA 629 A 99673 | A 630 hqPGS_C10HBa0115K16.1+_SGN-E396038+ (99213 99673) ******************************************************************************** EST sequence 196 -strand 686 n (File: SGN-E241789-) 1 TTGTTAATGA TGATGTCTTG GTATAAAAGA AGGCTTGATG AACTAAAAGA ATGAGGTTAG 61 GGGATCGGGT GTCACGAACC GACACGTAGT ATTAATGGAT CGGGTGTCAC GAACCGACAC 121 ATAGTATTAA TGGATCGGGT GTCACGAATC GGCACGTAGT ATTAGGAGAT CGGGTGTAAC 181 GAACCGACAC GTAGTATTAG GGGATCGGGT GTCACGAACC GACACGTAGC ATTAGGGGAT 241 CGGAGTATCA CGTTCCGACA CCACGATAGT AAAAAGAATG AATCTTGAAT TATGTTAATG 301 TACTCAATTT AATGAACCTG TTTCCCAAAT GAGTATGGTG TGGAGGCTTG AGTCCTCATA 361 GATGTTCTTG GGTTGTGCCC AATGGTTATG GTACTTGTTG TTGTCACCTG TTAAGTGTTA 421 TGGTTGATTT TATTTTATTA TTTGATATAT ATTGTTCTCT ATTCTGAGTT GGCCGATGAT 481 ATCTACTCAG TACTCGTGTT TGTACTGACC CCTACTTTTA TGTTTTCTTT TTGTTAATTG 541 TGGAGTGCAG CAAACGTACC GTCGTCTTCA ACTCAACCGC AACTCTAACC AGTCTTCATC 601 ACGTCAGATT TCAGGGTGAG CTATTGTTCC TAGCTCGGAC TGGATTCTCT CTCATTCATG 661 TCTTGATGTC CTTGAAGATC AGACAT Predicted gene structure (within gDNA segment 97920 to 102644): Exon 1 99998 100052 ( 55 n); cDNA 1 55 ( 55 n); score: 0.873 Intron 1 100053 100169 ( 117 n); Pd: 0.000 (s: 0.88), Pa: 0.000 (s: 0.92) Exon 2 100170 100350 ( 181 n); cDNA 56 236 ( 181 n); score: 0.906 Intron 2 100351 100431 ( 81 n); Pd: 0.000 (s: 0.96), Pa: 0.000 (s: 0.80) Exon 3 100432 100840 ( 409 n); cDNA 237 643 ( 407 n); score: 0.806 MATCH C10HBa0115K16.1+ SGN-E241789- 0.840 645 0.940 C PGS_C10HBa0115K16.1+_SGN-E241789- (99998 100052,100170 100350,100432 100840) Alignment (genomic DNA sequence = upper lines): TTATTAATGA TGATGCCTTG GTATAGAAGA AGGCTTGATG AATTAAAGTA ATGGGATTGA 100057 || ||||||| ||||| |||| ||||| |||| |||||||||| || |||| | ||| | TTGTTAATGA TGATGTCTTG GTATAAAAGA AGGCTTGATG AACTAAAAGA ATGAG..... 55 TGATGCCTTG GAATAGAGAA GGCCTGATGA TTTACAGAAT GATGTAGGGG ACCGGGTGTC 100117 .......... .......... .......... .......... .......... .......... 55 ACGAACCGAC ACGTAGAATT AGGGGATCGG GTGTCACGAA CCGACACGTA GAATTAGGGG 100177 ||||||| .......... .......... .......... .......... .......... ..GTTAGGGG 63 ATCGGGTGTC ACGAACCGAC ACGTAGAATT AGGGGATCGG GTGTCACGAA CTGACACGTA 100237 |||||||||| |||||||||| |||||| ||| | ||||||| |||||||||| | ||||| || ATCGGGTGTC ACGAACCGAC ACGTAGTATT AATGGATCGG GTGTCACGAA CCGACACATA 123 GAATTAGGGG ATCGGGTGTC ACAAACCGAC ACGTAGAATT AGGGGATCGG GTGTCACGAA 100297 | |||| || |||||||||| || || || | |||||| ||| ||| |||||| |||| ||||| GTATTAATGG ATCGGGTGTC ACGAATCGGC ACGTAGTATT AGGAGATCGG GTGTAACGAA 183 CCGACACGTA GAATTAGGGG ATCGGGTGTC ACGAACCGAC ACGTAGAATT AGGGGATCGG 100357 |||||||||| | |||||||| |||||||||| |||||||||| |||||| ||| ||| CCGACACGTA GTATTAGGGG ATCGGGTGTC ACGAACCGAC ACGTAGCATT AGG....... 236 GTGTCACGAA CCGACACGTA GATATAGGGG ATCGGAGTGT CACGTACCGA CACAAGAGGA 100417 .......... .......... .......... .......... .......... .......... 236 ATAATGAATA TGAGGGATCG GAGTGTCACG TACCGACACA AGAGAATTAA AGATAATGAA 100477 |||||| |||| ||||| | ||||||| | | ||| | | |||||| .......... ....GGATCG GAGTATCACG TTCCGACACC ACGATAGTAA AAAGAATGAA 282 TCTTGAAAGA TGTTAATATA CTCAATCTAA CGAACATAAT TCCCAAATGA GTATGGTGTT 100537 ||||||| | ||||||| || |||||| ||| |||| | | |||||||||| ||||||||| TCTTGAATTA TGTTAATGTA CTCAATTTAA TGAACCTGTT TCCCAAATGA GTATGGTGTG 342 GAGGCTTGAG CCCTCATGGA TGAACTTGAT GGTACTTATT GATGATTATA ATACTTGTTG 100597 |||||||||| |||||| || || |||| ||| | ||| |||| ||||||||| GAGGCTTGAG TCCTCATAGA TGTTCTTG-- GGTTGTGCCC AATGGTTATG GTACTTGTTG 400 TGGCTACATG TTGAATTTTA TAGTTGA-TT TATGATAATA -TTGATATAT ATTGTCCCCT 100655 | | || || || | | ||| | ||||| || ||| || || ||||||||| ||||| | || TTGTCACCTG TTAAGTGTTA TGGTTGATTT TATTTTATTA TTTGATATAT ATTGTTCTCT 460 ATTTTGAGTT GGCCGATGAT ATCTACTGAG TACCCGTGTT TTGTACTGAC CCCTACTTTT 100715 ||| |||||| |||||||||| ||||||| || ||| |||| | |||||||||| |||||||||| ATTCTGAGTT GGCCGATGAT ATCTACTCAG TACTCGTG-T TTGTACTGAC CCCTACTTTT 519 ATGTTTTCTT CTTGTTTATT TGTGGAGTGC AGCAAACGTG CCATCGTCTT CAACTCAACA 100775 |||||||||| ||| ||| | |||||||||| ||||||||| || ||||||| ||||||||| ATGTTTTCTT TTTG-TTAAT TGTGGAGTGC AGCAAACGTA CCGTCGTCTT CAACTCAACC 578 GTAATTCAAG CCAGTCTT-A CTACATCGGA AATTCAGGGT GAGCTAATGC TTCTAGCTTG 100834 | || || | |||||||| | || || | | |||||||| |||||| || | |||||| | GCAACTCTAA CCAGTCTTCA TCACGTCAG- ATTTCAGGGT GAGCTATTGT TCCTAGCTCG 637 GACTGG 100840 |||||| GACTGG 643 hqPGS_C10HBa0115K16.1+_SGN-E241789- (99998 100052,100170 100350,100432 100840) ******************************************************************************** EST sequence 129 -strand 726 n (File: SGN-E550322-) 1 GTTTTTTTTT TTTTTTTATG AATTAGCTCA ATGAAAAATG AGTAAATTTT TTATATTTTA 61 TGGCATAATT TTTTCATTAA TTCATGGTTG AGAAAATCTT TGTTTCTAAT AGTGTTATAA 121 ATCGTAAAAT AATAATAATA TTTAAGTAGG AAGAACATAA ATGTAACGAC CTGTTTAGTC 181 GTTTTGAGTA GCAGATTTTA TTTTTGGAAA AACAGGTTGA GACGACGGAA CCCACGACGG 241 ACCGTCATGA GCACGATGGA CCGTCGAGGA GTCTCGTTTC AAAACACTTA GAAATTCTGA 301 AATTGGGTAC TAAAAATCGA CTCTCTGAAC TTCGTAACGG AATGGCACGA CGGACCGTCA 361 CGGGCGTGAC GGACCGTCAC AGACTCTTTG GTGGAAATTG AGTCTCTGAA CCTTGCGACG 421 ACCTGCAGGA CGGACCGTCG CAGGCACGAC GGGCCATCAC AGGTTGCGTA ATCCCAGTCT 481 GGGTCGGATT TCTTTACACG TTTTAAGGGA CGTTTTGGAC TATTCCTACT TTAATTATAA 541 AGTTAGTGGG TTTATGTTAA TAAGTCTAAT TACCTGGGGG TTAAAAGAGG TAACCTTGAG 601 TAAATTAGTG GGTTATTATT CCATCTTTTA TTCTTAATTA TATGCTAATT AGGGTAAAAG 661 AAGGAGGGTT TGAATAAGAA AAAGAAAAGA ACAGAAAGAG AGAGAAGGAG AATCGATCTG 721 GTGCGA Predicted gene structure (within gDNA segment 96896 to 100938): Exon 1 99213 99761 ( 549 n); cDNA 160 726 ( 567 n); score: 0.765 PPA cDNA 19 2 MATCH C10HBa0115K16.1+ SGN-E550322- 0.765 549 0.756 C PGS_C10HBa0115K16.1+_SGN-E550322- (99213 99761) Alignment (genomic DNA sequence = upper lines): AATGTAACGA CCCGTTTAGT CGTTTTGAGC GGCAGACTTT ATTTTTGGAA AAACTGGCAG 99272 |||||||||| || ||||||| ||||||||| ||||| ||| |||||||||| |||| || | AATGTAACGA CCTGTTTAGT CGTTTTGAGT AGCAGATTTT ATTTTTGGAA AAACAGGTTG 219 AAGCGACGGA CCCCACGACG GACCATCATG GGCACGACGG ACCGTCGCAG GGTCTCGTTT 99332 | ||||||| ||||||||| |||| ||||| |||||| || ||||||| | ||||||||| AGACGACGGA ACCCACGACG GACCGTCATG AGCACGATGG ACCGTCGAGG AGTCTCGTTT 279 CAAAACACTT AGAAAATCTG AAATTGGGTA CTAAAAATCG ACTCTCTGAA CTTTGTGACG 99392 |||||||||| ||||| |||| |||||||||| |||||||||| |||||||||| ||| || ||| CAAAACACTT AGAAATTCTG AAATTGGGTA CTAAAAATCG ACTCTCTGAA CTTCGTAACG 339 GAATGGCAGG ACGGACCGTC A----C---A --GA-C--C- C-G------T GGTGGAAATT 99432 |||||||| | |||||||||| | | | || | | | | | |||||||| | GAATGGCACG ACGGACCGTC ACGGGCGTGA CGGACCGTCA CAGACTCTTT GGTGGAAA-T 398 TGGGTCTCTA AACTCTACGA CGACCTGCAG GACGGACCGT CGCAGGCACG ACGGCCCGTC 99492 || |||||| ||| | ||| |||||||||| |||||||||| |||||||||| |||| || || TGAGTCTCTG AACCTTGCGA CGACCTGCAG GACGGACCGT CGCAGGCACG ACGGGCCATC 458 AAAGGTTGCG CAAATCCCAG GCAGAGTCGG ATTTCTGGTT AAGTTTTAAG GGACGTTTTT 99552 | |||||||| |||||||| | | ||||| |||||| | |||||||| ||||||||| ACAGGTTGCG -TAATCCCAG TCTGGGTCGG ATTTCTTTAC ACGTTTTAAG GGACGTTTTG 517 GACTATTCTT GCCTTAATTA TAAAGTTCGT GGGTTTATAT TAATAACTCA AATTCTGGAG 99612 |||||||| | | ||||||| ||||||| || |||||||| | |||||| || |||| | GACTATTCCT ACTTTAATTA TAAAGTTAGT GGGTTTATGT TAATAAGTCT AATTACCTGG 577 GGGTTAAAAG AGGTAACCCT AAGTTAATTA GTGGGGTATT ATTGCCATCT TTTATTCTTA 99672 |||||||||| |||||||| | ||| ||||| ||||| |||| ||| |||||| |||||||||| GGGTTAAAAG AGGTAACCTT GAGTAAATTA GTGGGTTATT ATT-CCATCT TTTATTCTTA 636 ATTATATACT AATTAGGGTA AAAGAAAGAG GGTTGGAATA AAGAAAA-TA GA-AAGAACA 99730 ||||||| || |||||||||| |||||| ||| |||| ||||| | |||| | | || | | ATTATATGCT AATTAGGGTA AAAGAAGGAG GGTTTGAATA AGAAAAAGAA AAGAACAGAA 696 AGAGAGAGAG GGAGAATCGA ACGAGAAGGG A 99761 ||||||||| |||||||||| | | | | | AGAGAGAGAA GGAGAATCGA TC-TGGTGCG A 726 hqPGS_C10HBa0115K16.1+_SGN-E550322- (99213 99761) ******************************************************************************** EST sequence 125 -strand 729 n (File: SGN-E550212-) 1 GCCCCCCCCC GAGTTTTTTT TTTTTTTTTA TGAATTAGCT CAATGAAAAA TGAGTAAATT 61 TTTTATATTT TATGGCATAA TTTTTTCATT AATTCATGGT TGAGAAAATC TTTGTTTCTA 121 ATAGTGTTAT AAATCGTAAA ATAATAATAA TATTTAAGTA GGAAGAACAT AAATGTAACG 181 ACCTGTTTAG TCGTTTTGAG TAGCAGATTT TATTTTTGGA AAAACAGGTT GAGACGACGG 241 AACCCACGAC GGACCGTCAT GAGCACGATG GACCGTCGAG GAGTCTCGTT TCAAAACACT 301 TAGAAATTCT GAAATTGGGT ACTAAAAATC GACTCTCTGA ACTTCGTAAC GGAATGGCAC 361 GACGGACCGT CACGGGCGTG ACGGACCGTC ACAGACTCTT TGGTGGAAAT TGAGTCTCTG 421 AACCTTGCGA CGACCTGCAG GACGGACCGT CGCAGGCACG ACGGGCCATC ACAGGTTGCG 481 TAATCCCAGT CTGGGTCGGA TTTCTTTACA CGTTTTAAGG GACGTTTTGG ACTATTCCTA 541 CTTTAATTAT AAAGTTAGTG GGTTTATGTT AATAAGTCTA ATTACCTGGG GGTTAAAAGA 601 GGTAACCTTG AGTAAATTAG TGGGTTATTA TTCCATCTTT TATTCTTAAT TATATGCTAA 661 TTAGGGTAAA AGAAGGAGGG TTTGAATAAG AAAAAGAAAA GAACAGAAAG AGAGAGAAGG 721 AGAATCGAT Predicted gene structure (within gDNA segment 96776 to 100848): Exon 1 99213 99750 ( 538 n); cDNA 172 728 ( 557 n); score: 0.771 PPA cDNA 31 14 MATCH C10HBa0115K16.1+ SGN-E550212- 0.771 538 0.738 C PGS_C10HBa0115K16.1+_SGN-E550212- (99213 99750) Alignment (genomic DNA sequence = upper lines): AATGTAACGA CCCGTTTAGT CGTTTTGAGC GGCAGACTTT ATTTTTGGAA AAACTGGCAG 99272 |||||||||| || ||||||| ||||||||| ||||| ||| |||||||||| |||| || | AATGTAACGA CCTGTTTAGT CGTTTTGAGT AGCAGATTTT ATTTTTGGAA AAACAGGTTG 231 AAGCGACGGA CCCCACGACG GACCATCATG GGCACGACGG ACCGTCGCAG GGTCTCGTTT 99332 | ||||||| ||||||||| |||| ||||| |||||| || ||||||| | ||||||||| AGACGACGGA ACCCACGACG GACCGTCATG AGCACGATGG ACCGTCGAGG AGTCTCGTTT 291 CAAAACACTT AGAAAATCTG AAATTGGGTA CTAAAAATCG ACTCTCTGAA CTTTGTGACG 99392 |||||||||| ||||| |||| |||||||||| |||||||||| |||||||||| ||| || ||| CAAAACACTT AGAAATTCTG AAATTGGGTA CTAAAAATCG ACTCTCTGAA CTTCGTAACG 351 GAATGGCAGG ACGGACCGTC A----C---A --GA-C--C- C-G------T GGTGGAAATT 99432 |||||||| | |||||||||| | | | || | | | | | |||||||| | GAATGGCACG ACGGACCGTC ACGGGCGTGA CGGACCGTCA CAGACTCTTT GGTGGAAA-T 410 TGGGTCTCTA AACTCTACGA CGACCTGCAG GACGGACCGT CGCAGGCACG ACGGCCCGTC 99492 || |||||| ||| | ||| |||||||||| |||||||||| |||||||||| |||| || || TGAGTCTCTG AACCTTGCGA CGACCTGCAG GACGGACCGT CGCAGGCACG ACGGGCCATC 470 AAAGGTTGCG CAAATCCCAG GCAGAGTCGG ATTTCTGGTT AAGTTTTAAG GGACGTTTTT 99552 | |||||||| |||||||| | | ||||| |||||| | |||||||| ||||||||| ACAGGTTGCG -TAATCCCAG TCTGGGTCGG ATTTCTTTAC ACGTTTTAAG GGACGTTTTG 529 GACTATTCTT GCCTTAATTA TAAAGTTCGT GGGTTTATAT TAATAACTCA AATTCTGGAG 99612 |||||||| | | ||||||| ||||||| || |||||||| | |||||| || |||| | GACTATTCCT ACTTTAATTA TAAAGTTAGT GGGTTTATGT TAATAAGTCT AATTACCTGG 589 GGGTTAAAAG AGGTAACCCT AAGTTAATTA GTGGGGTATT ATTGCCATCT TTTATTCTTA 99672 |||||||||| |||||||| | ||| ||||| ||||| |||| ||| |||||| |||||||||| GGGTTAAAAG AGGTAACCTT GAGTAAATTA GTGGGTTATT ATT-CCATCT TTTATTCTTA 648 ATTATATACT AATTAGGGTA AAAGAAAGAG GGTTGGAATA A-AGAAA-AT AGAAAGAACA 99730 ||||||| || |||||||||| |||||| ||| |||| ||||| | | ||| | | || | | ATTATATGCT AATTAGGGTA AAAGAAGGAG GGTTTGAATA AGAAAAAGAA AAGAACAGAA 708 AGAGAGAGAG GGAGAATCGA 99750 ||||||||| |||||||||| AGAGAGAGAA GGAGAATCGA 728 hqPGS_C10HBa0115K16.1+_SGN-E550212- (99213 99750) ******************************************************************************** EST sequence 127 -strand 710 n (File: SGN-E550065-) 1 TTTTTTTCTT ATGAATCAGC TCAATGAAAA ATGAGTAAAT TTTTTATATT TCATGGCATA 61 ATTTTTTCAT TAATTCATGG TTGAGAAAAT CTTTGTTTCT AATAGTGTTA TAAATCGTAA 121 AATAATAATA ATATTTAAGT AGGAAGAACA TAAATGTAAC GACCTGTTTA GTCGTTTTGA 181 GTAGCAGATT TTATTTTTGG AAAAACAGGT TGAGACGACG GAACCCACGA CGGACCGTCA 241 TGAGCACGAT GGACCGTCGA GGAGTCTCGT TTCAAAACAC TTAGAAATTC TGAAATTGGG 301 TACTAAAAAT CGACTCTCTG AACTTCGTAA CGGAATGGCA CGACGGACCG TCACGGGCGT 361 GACGGACCGT CACAGACTCT TTGGTGGAAA TTGAGTCTCT GAACCTTGCG ACGACCTGCA 421 GGACGGACCG TCGCAGGCAC GACGGGCCAT CACAGGTTGC GTAATCCCAG TCTGGGTCGG 481 ATTTCTTTAC ACGTTTTAAG GGACGTTTTG GACTATTCCT ACTTTAATTA TAAAGTTAGT 541 GGGTTTATGT TAATAAGTCT AATTACCTGG GGGTTAAAAG AGGTAACCTT GAGTAAATTA 601 GTGGGTTATT ATTCCATCTT TTATTCTTAA TTATATGCTA ATTAGGGTAA AAGAAGGAGG 661 GTTTGAATAA GAAAAAGAAA AGAACAGAAA GAGAGAGAAG GAGAATCGAT Predicted gene structure (within gDNA segment 96966 to 100848): Exon 1 99213 99750 ( 538 n); cDNA 153 709 ( 557 n); score: 0.771 MATCH C10HBa0115K16.1+ SGN-E550065- 0.771 538 0.758 C PGS_C10HBa0115K16.1+_SGN-E550065- (99213 99750) Alignment (genomic DNA sequence = upper lines): AATGTAACGA CCCGTTTAGT CGTTTTGAGC GGCAGACTTT ATTTTTGGAA AAACTGGCAG 99272 |||||||||| || ||||||| ||||||||| ||||| ||| |||||||||| |||| || | AATGTAACGA CCTGTTTAGT CGTTTTGAGT AGCAGATTTT ATTTTTGGAA AAACAGGTTG 212 AAGCGACGGA CCCCACGACG GACCATCATG GGCACGACGG ACCGTCGCAG GGTCTCGTTT 99332 | ||||||| ||||||||| |||| ||||| |||||| || ||||||| | ||||||||| AGACGACGGA ACCCACGACG GACCGTCATG AGCACGATGG ACCGTCGAGG AGTCTCGTTT 272 CAAAACACTT AGAAAATCTG AAATTGGGTA CTAAAAATCG ACTCTCTGAA CTTTGTGACG 99392 |||||||||| ||||| |||| |||||||||| |||||||||| |||||||||| ||| || ||| CAAAACACTT AGAAATTCTG AAATTGGGTA CTAAAAATCG ACTCTCTGAA CTTCGTAACG 332 GAATGGCAGG ACGGACCGTC A----C---A --GA-C--C- C-G------T GGTGGAAATT 99432 |||||||| | |||||||||| | | | || | | | | | |||||||| | GAATGGCACG ACGGACCGTC ACGGGCGTGA CGGACCGTCA CAGACTCTTT GGTGGAAA-T 391 TGGGTCTCTA AACTCTACGA CGACCTGCAG GACGGACCGT CGCAGGCACG ACGGCCCGTC 99492 || |||||| ||| | ||| |||||||||| |||||||||| |||||||||| |||| || || TGAGTCTCTG AACCTTGCGA CGACCTGCAG GACGGACCGT CGCAGGCACG ACGGGCCATC 451 AAAGGTTGCG CAAATCCCAG GCAGAGTCGG ATTTCTGGTT AAGTTTTAAG GGACGTTTTT 99552 | |||||||| |||||||| | | ||||| |||||| | |||||||| ||||||||| ACAGGTTGCG -TAATCCCAG TCTGGGTCGG ATTTCTTTAC ACGTTTTAAG GGACGTTTTG 510 GACTATTCTT GCCTTAATTA TAAAGTTCGT GGGTTTATAT TAATAACTCA AATTCTGGAG 99612 |||||||| | | ||||||| ||||||| || |||||||| | |||||| || |||| | GACTATTCCT ACTTTAATTA TAAAGTTAGT GGGTTTATGT TAATAAGTCT AATTACCTGG 570 GGGTTAAAAG AGGTAACCCT AAGTTAATTA GTGGGGTATT ATTGCCATCT TTTATTCTTA 99672 |||||||||| |||||||| | ||| ||||| ||||| |||| ||| |||||| |||||||||| GGGTTAAAAG AGGTAACCTT GAGTAAATTA GTGGGTTATT ATT-CCATCT TTTATTCTTA 629 ATTATATACT AATTAGGGTA AAAGAAAGAG GGTTGGAATA A-AGAAA-AT AGAAAGAACA 99730 ||||||| || |||||||||| |||||| ||| |||| ||||| | | ||| | | || | | ATTATATGCT AATTAGGGTA AAAGAAGGAG GGTTTGAATA AGAAAAAGAA AAGAACAGAA 689 AGAGAGAGAG GGAGAATCGA 99750 ||||||||| |||||||||| AGAGAGAGAA GGAGAATCGA 709 hqPGS_C10HBa0115K16.1+_SGN-E550065- (99213 99750) ******************************************************************************** EST sequence 131 -strand 732 n (File: SGN-E550201-) 1 GGCCCCCCCT CGAGTTTTTT TTTTTTTTTT TTATGAATTA GCTCAATGAA AAATGAGTAA 61 ATTTTTTATA TTTTATGGCA TAATTTTTTC ATTAATTCAT GGTNGAGAAA ATCTTTGTTT 121 CTAATAGTGT TATAAATCGT AAAATAATAA TAATATTTAA GTAGGAAGAA CATAAATGTA 181 ACGACCTGTT TAGTCGTTTT GAGTAGCAGA TTTTATTTTT GGAAAAACAG GTTGAGACGA 241 CGGAACCCAC GACGGACCGT CATGAGCACG ATGGACCGTC GAGGAGTCTC GTTTCAAAAC 301 ACTTAGAAAT TCTGAAATTG GGTACTAAAA ATCGACTCTC TGAACTTCGT AACGGAATGG 361 CACGACGGAC CGTCACGGGC GTGACGGACC GTCACAGACT CTTTGGTGGA AATTGAGTCT 421 CTGAACCTTG CGACGACCTG CAGGACGGAC CGTCGCAGGC ACGACGGGCC ATCACAGGTT 481 GCGTAATCCC AGTCTGGGTC GGATTTCTTT ACACGTTTTA AGGGACGTTT TGGACTATTC 541 CTACTTTAAT TATAAAGTTA GTGGGTTTAT GTTAATAAGT CTAATTACCT GGGGGTTAAA 601 AGAGGTAACC TTGAGTAAAT TAGTGGGTTA TTATTCCATC TTTTATTCTT AATTATATGC 661 TAATTAGGGT AAAAGAAGGA GGGTTTGAAT AAGAAAAAGA AAAGAACAGA AAGAGAGAGA 721 AGGAGAATCG AT Predicted gene structure (within gDNA segment 96746 to 100848): Exon 1 99213 99750 ( 538 n); cDNA 175 731 ( 557 n); score: 0.771 PPA cDNA 34 15 MATCH C10HBa0115K16.1+ SGN-E550201- 0.771 538 0.735 C PGS_C10HBa0115K16.1+_SGN-E550201- (99213 99750) Alignment (genomic DNA sequence = upper lines): AATGTAACGA CCCGTTTAGT CGTTTTGAGC GGCAGACTTT ATTTTTGGAA AAACTGGCAG 99272 |||||||||| || ||||||| ||||||||| ||||| ||| |||||||||| |||| || | AATGTAACGA CCTGTTTAGT CGTTTTGAGT AGCAGATTTT ATTTTTGGAA AAACAGGTTG 234 AAGCGACGGA CCCCACGACG GACCATCATG GGCACGACGG ACCGTCGCAG GGTCTCGTTT 99332 | ||||||| ||||||||| |||| ||||| |||||| || ||||||| | ||||||||| AGACGACGGA ACCCACGACG GACCGTCATG AGCACGATGG ACCGTCGAGG AGTCTCGTTT 294 CAAAACACTT AGAAAATCTG AAATTGGGTA CTAAAAATCG ACTCTCTGAA CTTTGTGACG 99392 |||||||||| ||||| |||| |||||||||| |||||||||| |||||||||| ||| || ||| CAAAACACTT AGAAATTCTG AAATTGGGTA CTAAAAATCG ACTCTCTGAA CTTCGTAACG 354 GAATGGCAGG ACGGACCGTC A----C---A --GA-C--C- C-G------T GGTGGAAATT 99432 |||||||| | |||||||||| | | | || | | | | | |||||||| | GAATGGCACG ACGGACCGTC ACGGGCGTGA CGGACCGTCA CAGACTCTTT GGTGGAAA-T 413 TGGGTCTCTA AACTCTACGA CGACCTGCAG GACGGACCGT CGCAGGCACG ACGGCCCGTC 99492 || |||||| ||| | ||| |||||||||| |||||||||| |||||||||| |||| || || TGAGTCTCTG AACCTTGCGA CGACCTGCAG GACGGACCGT CGCAGGCACG ACGGGCCATC 473 AAAGGTTGCG CAAATCCCAG GCAGAGTCGG ATTTCTGGTT AAGTTTTAAG GGACGTTTTT 99552 | |||||||| |||||||| | | ||||| |||||| | |||||||| ||||||||| ACAGGTTGCG -TAATCCCAG TCTGGGTCGG ATTTCTTTAC ACGTTTTAAG GGACGTTTTG 532 GACTATTCTT GCCTTAATTA TAAAGTTCGT GGGTTTATAT TAATAACTCA AATTCTGGAG 99612 |||||||| | | ||||||| ||||||| || |||||||| | |||||| || |||| | GACTATTCCT ACTTTAATTA TAAAGTTAGT GGGTTTATGT TAATAAGTCT AATTACCTGG 592 GGGTTAAAAG AGGTAACCCT AAGTTAATTA GTGGGGTATT ATTGCCATCT TTTATTCTTA 99672 |||||||||| |||||||| | ||| ||||| ||||| |||| ||| |||||| |||||||||| GGGTTAAAAG AGGTAACCTT GAGTAAATTA GTGGGTTATT ATT-CCATCT TTTATTCTTA 651 ATTATATACT AATTAGGGTA AAAGAAAGAG GGTTGGAATA A-AGAAA-AT AGAAAGAACA 99730 ||||||| || |||||||||| |||||| ||| |||| ||||| | | ||| | | || | | ATTATATGCT AATTAGGGTA AAAGAAGGAG GGTTTGAATA AGAAAAAGAA AAGAACAGAA 711 AGAGAGAGAG GGAGAATCGA 99750 ||||||||| |||||||||| AGAGAGAGAA GGAGAATCGA 731 hqPGS_C10HBa0115K16.1+_SGN-E550201- (99213 99750) ******************************************************************************** EST sequence 133 -strand 709 n (File: SGN-E550207-) 1 TTTTTTTTTA TGAATTAGCT CAATGAAAAA TGAGTAAATT TTTTATATTT TATGGCATAA 61 TTTTTTCATT AATTCATGGT GNAGAAAATC TTTGTTTCTA ATAGTGTTAT AAATCGTAAA 121 ATAATAATAA TATTTAAGTA GGAAGAACAT AAATGTAACG ACCTGTTTAG TCGTTTTGAG 181 TAGCAGATTT TATTTTTGGA AAAACAGGTT GAGACGACGG AACCCACGAC GGACCGTCAT 241 GAGCACGATG GACCGTCGAG GAGTCTCGTT TCAAAACACT TAGAAATTCT GAAATTGGGT 301 ACTAAAAATC GACTCTCTGA ACTTCGTAAC GGAATGGCAC GACGGACCGT CACGGGCGTG 361 ACGGACCGTC ACAGACTCTT TGGTGGAAAT TGAGTCTCTG AACCTTGCGA CGACCTGCAG 421 GACGGACCGT CGCAGGCACG ACGGGCCATC ACAGGTTGCG TAATCCCAGT CTGGGTCGGA 481 TTTCTTTACA CGTTTTAAGG GACGTTTTGG ACTATTCCTA CTTTAATTAT AAAGTTAGTG 541 GGTTTATGTT AATAAGTCTA ATTACCTGGG GGTTAAAAGA GGTAACCTTG AGTAAATTAG 601 TGGGTTATTA TTCCATCTTT TATTCTTAAT TATATGCTAA TTAGGGTAAA AGAAGGAGGG 661 TTTGAATAAG AAAAAGAAAA GAACAGAAAG AGAGAGAAGG AGAATCGAT Predicted gene structure (within gDNA segment 96976 to 100848): Exon 1 99213 99750 ( 538 n); cDNA 152 708 ( 557 n); score: 0.771 PPA cDNA 11 1 MATCH C10HBa0115K16.1+ SGN-E550207- 0.771 538 0.759 C PGS_C10HBa0115K16.1+_SGN-E550207- (99213 99750) Alignment (genomic DNA sequence = upper lines): AATGTAACGA CCCGTTTAGT CGTTTTGAGC GGCAGACTTT ATTTTTGGAA AAACTGGCAG 99272 |||||||||| || ||||||| ||||||||| ||||| ||| |||||||||| |||| || | AATGTAACGA CCTGTTTAGT CGTTTTGAGT AGCAGATTTT ATTTTTGGAA AAACAGGTTG 211 AAGCGACGGA CCCCACGACG GACCATCATG GGCACGACGG ACCGTCGCAG GGTCTCGTTT 99332 | ||||||| ||||||||| |||| ||||| |||||| || ||||||| | ||||||||| AGACGACGGA ACCCACGACG GACCGTCATG AGCACGATGG ACCGTCGAGG AGTCTCGTTT 271 CAAAACACTT AGAAAATCTG AAATTGGGTA CTAAAAATCG ACTCTCTGAA CTTTGTGACG 99392 |||||||||| ||||| |||| |||||||||| |||||||||| |||||||||| ||| || ||| CAAAACACTT AGAAATTCTG AAATTGGGTA CTAAAAATCG ACTCTCTGAA CTTCGTAACG 331 GAATGGCAGG ACGGACCGTC A----C---A --GA-C--C- C-G------T GGTGGAAATT 99432 |||||||| | |||||||||| | | | || | | | | | |||||||| | GAATGGCACG ACGGACCGTC ACGGGCGTGA CGGACCGTCA CAGACTCTTT GGTGGAAA-T 390 TGGGTCTCTA AACTCTACGA CGACCTGCAG GACGGACCGT CGCAGGCACG ACGGCCCGTC 99492 || |||||| ||| | ||| |||||||||| |||||||||| |||||||||| |||| || || TGAGTCTCTG AACCTTGCGA CGACCTGCAG GACGGACCGT CGCAGGCACG ACGGGCCATC 450 AAAGGTTGCG CAAATCCCAG GCAGAGTCGG ATTTCTGGTT AAGTTTTAAG GGACGTTTTT 99552 | |||||||| |||||||| | | ||||| |||||| | |||||||| ||||||||| ACAGGTTGCG -TAATCCCAG TCTGGGTCGG ATTTCTTTAC ACGTTTTAAG GGACGTTTTG 509 GACTATTCTT GCCTTAATTA TAAAGTTCGT GGGTTTATAT TAATAACTCA AATTCTGGAG 99612 |||||||| | | ||||||| ||||||| || |||||||| | |||||| || |||| | GACTATTCCT ACTTTAATTA TAAAGTTAGT GGGTTTATGT TAATAAGTCT AATTACCTGG 569 GGGTTAAAAG AGGTAACCCT AAGTTAATTA GTGGGGTATT ATTGCCATCT TTTATTCTTA 99672 |||||||||| |||||||| | ||| ||||| ||||| |||| ||| |||||| |||||||||| GGGTTAAAAG AGGTAACCTT GAGTAAATTA GTGGGTTATT ATT-CCATCT TTTATTCTTA 628 ATTATATACT AATTAGGGTA AAAGAAAGAG GGTTGGAATA A-AGAAA-AT AGAAAGAACA 99730 ||||||| || |||||||||| |||||| ||| |||| ||||| | | ||| | | || | | ATTATATGCT AATTAGGGTA AAAGAAGGAG GGTTTGAATA AGAAAAAGAA AAGAACAGAA 688 AGAGAGAGAG GGAGAATCGA 99750 ||||||||| |||||||||| AGAGAGAGAA GGAGAATCGA 708 hqPGS_C10HBa0115K16.1+_SGN-E550207- (99213 99750) ******************************************************************************** EST sequence 135 -strand 715 n (File: SGN-E550335-) 1 TTTTTTTTTT TTTTTTATGA ATTAGCTCAA TGAAAAATGA GTAAATTTTT TATATTTTAT 61 GGCATAATTT TTTCATTAAT TCATGGTNGA GAAAATCTTT GTTTCTAATA GTGTTATAAA 121 TCGTAAAATA ATAATAATAT TTAAGTAGGA AGAACATAAA TGTAACGACC TGTTTAGTCG 181 TTTTGAGTAG CAGATTTTAT TTTTGGAAAA ACAGGTTGAG ACGACGGAAC CCACGACGGA 241 CCGTCATGAG CACGATGGAC CGTCGAGGAG TCTCGTTTCA AAACACTTAG AAATTCTGAA 301 ATTGGGTACT AAAAATCGAC TCTCTGAACT TCGTAACGGA ATGGCACGAC GGACCGTCAC 361 GGGCGTGACG GACCGTCACA GATTCTTTGG TGGAAATTGA GTCTCTGAAC CTTGCGACGA 421 CCTGCAGGAC GGACCGTCGC AGGCACGACG GGCCATCACA GGTTGCGTAA TCCCAGTCTG 481 GGTCGGATTT CTTTACACGT TTTAAGGGAC GTTTTGGACT ATTCCTACTT TAATTATAAA 541 GTTAGTGGGT TTATGTTAAT AAGTCTAATT ACCTGGGGGT TAAAAGAGGT AACCTTGAGT 601 AAATTAGTGG GTTATTATTC CATCTTTTAT TCTTAATTAT ATGCTAATTA GGGTAAAAGA 661 AGGAGGGTTG AATAAGAAAA AGAAAAGAAC AGAAAGAGAG AGAAGGAGAA TCGAT Predicted gene structure (within gDNA segment 96906 to 100838): Exon 1 99213 99750 ( 538 n); cDNA 159 714 ( 556 n); score: 0.770 PPA cDNA 18 1 MATCH C10HBa0115K16.1+ SGN-E550335- 0.770 538 0.752 C PGS_C10HBa0115K16.1+_SGN-E550335- (99213 99750) Alignment (genomic DNA sequence = upper lines): AATGTAACGA CCCGTTTAGT CGTTTTGAGC GGCAGACTTT ATTTTTGGAA AAACTGGCAG 99272 |||||||||| || ||||||| ||||||||| ||||| ||| |||||||||| |||| || | AATGTAACGA CCTGTTTAGT CGTTTTGAGT AGCAGATTTT ATTTTTGGAA AAACAGGTTG 218 AAGCGACGGA CCCCACGACG GACCATCATG GGCACGACGG ACCGTCGCAG GGTCTCGTTT 99332 | ||||||| ||||||||| |||| ||||| |||||| || ||||||| | ||||||||| AGACGACGGA ACCCACGACG GACCGTCATG AGCACGATGG ACCGTCGAGG AGTCTCGTTT 278 CAAAACACTT AGAAAATCTG AAATTGGGTA CTAAAAATCG ACTCTCTGAA CTTTGTGACG 99392 |||||||||| ||||| |||| |||||||||| |||||||||| |||||||||| ||| || ||| CAAAACACTT AGAAATTCTG AAATTGGGTA CTAAAAATCG ACTCTCTGAA CTTCGTAACG 338 GAATGGCAGG ACGGACCGTC A----C---A --GA-C--C- C-G------T GGTGGAAATT 99432 |||||||| | |||||||||| | | | || | | | | | |||||||| | GAATGGCACG ACGGACCGTC ACGGGCGTGA CGGACCGTCA CAGATTCTTT GGTGGAAA-T 397 TGGGTCTCTA AACTCTACGA CGACCTGCAG GACGGACCGT CGCAGGCACG ACGGCCCGTC 99492 || |||||| ||| | ||| |||||||||| |||||||||| |||||||||| |||| || || TGAGTCTCTG AACCTTGCGA CGACCTGCAG GACGGACCGT CGCAGGCACG ACGGGCCATC 457 AAAGGTTGCG CAAATCCCAG GCAGAGTCGG ATTTCTGGTT AAGTTTTAAG GGACGTTTTT 99552 | |||||||| |||||||| | | ||||| |||||| | |||||||| ||||||||| ACAGGTTGCG -TAATCCCAG TCTGGGTCGG ATTTCTTTAC ACGTTTTAAG GGACGTTTTG 516 GACTATTCTT GCCTTAATTA TAAAGTTCGT GGGTTTATAT TAATAACTCA AATTCTGGAG 99612 |||||||| | | ||||||| ||||||| || |||||||| | |||||| || |||| | GACTATTCCT ACTTTAATTA TAAAGTTAGT GGGTTTATGT TAATAAGTCT AATTACCTGG 576 GGGTTAAAAG AGGTAACCCT AAGTTAATTA GTGGGGTATT ATTGCCATCT TTTATTCTTA 99672 |||||||||| |||||||| | ||| ||||| ||||| |||| ||| |||||| |||||||||| GGGTTAAAAG AGGTAACCTT GAGTAAATTA GTGGGTTATT ATT-CCATCT TTTATTCTTA 635 ATTATATACT AATTAGGGTA AAAGAAAGAG GGTTGGA-AT AAAGAAAATA GAAAGAACAA 99731 ||||||| || |||||||||| |||||| ||| ||||| | | || || | | || | || ATTATATGCT AATTAGGGTA AAAGAAGGAG GGTTGAATAA GAAAAAGAAA AGAACAGAAA 695 GAGAGAGAGG GAGAATCGA 99750 |||||||| | ||||||||| GAGAGAGAAG GAGAATCGA 714 hqPGS_C10HBa0115K16.1+_SGN-E550335- (99213 99750) ******************************************************************************** EST sequence 154 -strand 714 n (File: SGN-E390013-) 1 TTTTTTTTTT TTTTATGAAT TAGCTCAATG AAAAATGAGT AAATTTTTTA TATTTTATGG 61 CATAATTTTT TCATTAATTC ATGGTTGAGA AAATCTTNGT TTCTAATAGT GTTATAAATC 121 GTAAAATAAT AATAATATTT AAGTAGGAAG AACATAAATG TAACGACCTG TTTAGTCGTT 181 TTGAGTAGCA GATTTTATTT TTGGAAAAAC AGGTTGAGAC GACGGAACCC ACGACGGACC 241 GTCATGAGCA CGATGGACCG TCGAGGAGTC TCGTTTCAAA ACACTTAGAA ATTCTGAAAT 301 TGGGTACTAA AAATCGACTC TCTGAACTTC GTAACGGAAT GGCACGACGG ACCGTCACGG 361 GCGTGACGGA CCGTCACAGA CTCTTTGGTG GAAATTGAGT CTCTGAACCT TGCGACGACC 421 TGCAGGACGG ACCGTCGCAG GCACGACGGG CCATCACAGG TTGCGTAATC CCAGTCTGGG 481 TCGGATTTCT TTACACGTTT TAAGGGACGT TTTGGACTAT TCCTACTTTA ATTATAAAGT 541 TAGTGGGTTT ATGTTAATAA GTCTAATTAC CTGGGGGTTA AAAGAGGTAA CCTTGAGTAA 601 ATTAGTGGGT TATTATTCCA TCTTTTATTC TTAATTATAT GCTAATTAGG GTAAAAGAAG 661 GAGGGTTTGA ATAAGAAAAA GAAAAGAACA GAAAGAGAGA GAAGGAGAAT CGAT Predicted gene structure (within gDNA segment 96926 to 100848): Exon 1 99213 99750 ( 538 n); cDNA 157 713 ( 557 n); score: 0.771 PPA cDNA 16 1 MATCH C10HBa0115K16.1+ SGN-E390013- 0.771 538 0.754 C PGS_C10HBa0115K16.1+_SGN-E390013- (99213 99750) Alignment (genomic DNA sequence = upper lines): AATGTAACGA CCCGTTTAGT CGTTTTGAGC GGCAGACTTT ATTTTTGGAA AAACTGGCAG 99272 |||||||||| || ||||||| ||||||||| ||||| ||| |||||||||| |||| || | AATGTAACGA CCTGTTTAGT CGTTTTGAGT AGCAGATTTT ATTTTTGGAA AAACAGGTTG 216 AAGCGACGGA CCCCACGACG GACCATCATG GGCACGACGG ACCGTCGCAG GGTCTCGTTT 99332 | ||||||| ||||||||| |||| ||||| |||||| || ||||||| | ||||||||| AGACGACGGA ACCCACGACG GACCGTCATG AGCACGATGG ACCGTCGAGG AGTCTCGTTT 276 CAAAACACTT AGAAAATCTG AAATTGGGTA CTAAAAATCG ACTCTCTGAA CTTTGTGACG 99392 |||||||||| ||||| |||| |||||||||| |||||||||| |||||||||| ||| || ||| CAAAACACTT AGAAATTCTG AAATTGGGTA CTAAAAATCG ACTCTCTGAA CTTCGTAACG 336 GAATGGCAGG ACGGACCGTC A----C---A --GA-C--C- C-G------T GGTGGAAATT 99432 |||||||| | |||||||||| | | | || | | | | | |||||||| | GAATGGCACG ACGGACCGTC ACGGGCGTGA CGGACCGTCA CAGACTCTTT GGTGGAAA-T 395 TGGGTCTCTA AACTCTACGA CGACCTGCAG GACGGACCGT CGCAGGCACG ACGGCCCGTC 99492 || |||||| ||| | ||| |||||||||| |||||||||| |||||||||| |||| || || TGAGTCTCTG AACCTTGCGA CGACCTGCAG GACGGACCGT CGCAGGCACG ACGGGCCATC 455 AAAGGTTGCG CAAATCCCAG GCAGAGTCGG ATTTCTGGTT AAGTTTTAAG GGACGTTTTT 99552 | |||||||| |||||||| | | ||||| |||||| | |||||||| ||||||||| ACAGGTTGCG -TAATCCCAG TCTGGGTCGG ATTTCTTTAC ACGTTTTAAG GGACGTTTTG 514 GACTATTCTT GCCTTAATTA TAAAGTTCGT GGGTTTATAT TAATAACTCA AATTCTGGAG 99612 |||||||| | | ||||||| ||||||| || |||||||| | |||||| || |||| | GACTATTCCT ACTTTAATTA TAAAGTTAGT GGGTTTATGT TAATAAGTCT AATTACCTGG 574 GGGTTAAAAG AGGTAACCCT AAGTTAATTA GTGGGGTATT ATTGCCATCT TTTATTCTTA 99672 |||||||||| |||||||| | ||| ||||| ||||| |||| ||| |||||| |||||||||| GGGTTAAAAG AGGTAACCTT GAGTAAATTA GTGGGTTATT ATT-CCATCT TTTATTCTTA 633 ATTATATACT AATTAGGGTA AAAGAAAGAG GGTTGGAATA A-AGAAA-AT AGAAAGAACA 99730 ||||||| || |||||||||| |||||| ||| |||| ||||| | | ||| | | || | | ATTATATGCT AATTAGGGTA AAAGAAGGAG GGTTTGAATA AGAAAAAGAA AAGAACAGAA 693 AGAGAGAGAG GGAGAATCGA 99750 ||||||||| |||||||||| AGAGAGAGAA GGAGAATCGA 713 hqPGS_C10HBa0115K16.1+_SGN-E390013- (99213 99750) ******************************************************************************** EST sequence 156 -strand 720 n (File: SGN-E389834-) 1 CCCTCGATTT TTTTTTTTTT TTCACGAATA GCTCAATGAA GAACGAGTAA ATTTTTATAT 61 TTCATGGCAT ATTTTTTCAT TAATTCATGG TCGAGAAAAT CTTCGTTTCT AATAGTGTTA 121 TAAATCGTAA AATAATAATG ATATTTAAGT AGGACGATCA TAAATGTAAC GTCCTGTTTA 181 GTCGTTCTGA GTAGCAGATT TTATTTTTGG AAAAACAGGT TGAGTCGACG TAACCCACGA 241 CGGACCGTCA TGAGCACGAT GGACCGTCGA GGAGTCTCGT TTCAAAACAC TTAGAAATTC 301 TGAAATTGGG TACTAAAAAT CGACTCTCTG AACTTCGTAA CGGAATGGCA CGACGGACCG 361 TCACGGGCGT GACGGACCGT CACAGACTCT TTGGTGGAAA TTGAGTCTCT GAACCTTGCG 421 ACGACCTGCA GGACGGACCG TCGCAGGCAC GACGGGCCAT CACAGGTTGC GTAATCCCAG 481 TCTGGGTCGG ATTTCTTTAC ACGTTTTAAG GGACGTTTTG GACTATTCCT ACTTTAATTA 541 TAAAGTTAGT GGGTTTATGT TAATAAGTCT AATTACCTGG GGGTTAAAAG AGGTAACCTT 601 GAGTAAATTA GTGGGTTATT ATTCCATCTT TTATTCTTAA TTATATGCTA ATTAGGGTAA 661 AAGAAGGAGG GTTTGAATAA GAAAAAGAAA AGAACAGAAA GAGAGAGAAG GAGAATCGAT Predicted gene structure (within gDNA segment 95984 to 100848): Exon 1 99213 99750 ( 538 n); cDNA 163 719 ( 557 n); score: 0.766 PPA cDNA 22 7 MATCH C10HBa0115K16.1+ SGN-E389834- 0.766 538 0.747 C PGS_C10HBa0115K16.1+_SGN-E389834- (99213 99750) Alignment (genomic DNA sequence = upper lines): AATGTAACGA CCCGTTTAGT CGTTTTGAGC GGCAGACTTT ATTTTTGGAA AAACTGGCAG 99272 ||||||||| || ||||||| |||| |||| ||||| ||| |||||||||| |||| || | AATGTAACGT CCTGTTTAGT CGTTCTGAGT AGCAGATTTT ATTTTTGGAA AAACAGGTTG 222 AAGCGACGGA CCCCACGACG GACCATCATG GGCACGACGG ACCGTCGCAG GGTCTCGTTT 99332 | ||||| | ||||||||| |||| ||||| |||||| || ||||||| | ||||||||| AGTCGACGTA ACCCACGACG GACCGTCATG AGCACGATGG ACCGTCGAGG AGTCTCGTTT 282 CAAAACACTT AGAAAATCTG AAATTGGGTA CTAAAAATCG ACTCTCTGAA CTTTGTGACG 99392 |||||||||| ||||| |||| |||||||||| |||||||||| |||||||||| ||| || ||| CAAAACACTT AGAAATTCTG AAATTGGGTA CTAAAAATCG ACTCTCTGAA CTTCGTAACG 342 GAATGGCAGG ACGGACCGTC A----C---A --GA-C--C- C-G------T GGTGGAAATT 99432 |||||||| | |||||||||| | | | || | | | | | |||||||| | GAATGGCACG ACGGACCGTC ACGGGCGTGA CGGACCGTCA CAGACTCTTT GGTGGAAA-T 401 TGGGTCTCTA AACTCTACGA CGACCTGCAG GACGGACCGT CGCAGGCACG ACGGCCCGTC 99492 || |||||| ||| | ||| |||||||||| |||||||||| |||||||||| |||| || || TGAGTCTCTG AACCTTGCGA CGACCTGCAG GACGGACCGT CGCAGGCACG ACGGGCCATC 461 AAAGGTTGCG CAAATCCCAG GCAGAGTCGG ATTTCTGGTT AAGTTTTAAG GGACGTTTTT 99552 | |||||||| |||||||| | | ||||| |||||| | |||||||| ||||||||| ACAGGTTGCG -TAATCCCAG TCTGGGTCGG ATTTCTTTAC ACGTTTTAAG GGACGTTTTG 520 GACTATTCTT GCCTTAATTA TAAAGTTCGT GGGTTTATAT TAATAACTCA AATTCTGGAG 99612 |||||||| | | ||||||| ||||||| || |||||||| | |||||| || |||| | GACTATTCCT ACTTTAATTA TAAAGTTAGT GGGTTTATGT TAATAAGTCT AATTACCTGG 580 GGGTTAAAAG AGGTAACCCT AAGTTAATTA GTGGGGTATT ATTGCCATCT TTTATTCTTA 99672 |||||||||| |||||||| | ||| ||||| ||||| |||| ||| |||||| |||||||||| GGGTTAAAAG AGGTAACCTT GAGTAAATTA GTGGGTTATT ATT-CCATCT TTTATTCTTA 639 ATTATATACT AATTAGGGTA AAAGAAAGAG GGTTGGAATA A-AGAAA-AT AGAAAGAACA 99730 ||||||| || |||||||||| |||||| ||| |||| ||||| | | ||| | | || | | ATTATATGCT AATTAGGGTA AAAGAAGGAG GGTTTGAATA AGAAAAAGAA AAGAACAGAA 699 AGAGAGAGAG GGAGAATCGA 99750 ||||||||| |||||||||| AGAGAGAGAA GGAGAATCGA 719 hqPGS_C10HBa0115K16.1+_SGN-E389834- (99213 99750) ******************************************************************************** EST sequence 159 -strand 717 n (File: SGN-E550484-) 1 TTTTTTTTTT TTTTTTTATG AATTAGCTCA ATGAAAAATG AGTAAATTTT TTATATTTTA 61 TGGCATAATT TTTTCATTAA TTCATGGTTG AGAAAATCTT TGTTTCTAAT AGTGTTATAA 121 ATCGTAAAAT AATAATAATA TTTAAGTAGG AAGAACATAA ATGTAACGAC CTGTTTAGTC 181 GTTTTGAGTA GCAGATTTTA TTTTTGGAAA AACAGGTTGA GACGACGGAA CCCACGACGG 241 ACCGTCATGA GCACGATGGA CCGTCGAGGA GTCTCGTTTC AAAACACTTA GAAATTCTGA 301 AATTGGGTAC TAAAAATCGA CTCTCTGAAC TTCGTAACGG AATGGCACGA CGGACCGTCA 361 CGGGCGTGAC GGACCGTCAC AGACTCTTTG GTGGAAATTG AGTCTCTGAA CCTTGCGACG 421 ACCTGCAGGA CGGACCGTCG CAGGCACGAC GGGCCATCAC AGGTTGCGTA ATCCCAGTCT 481 GGGTCGGATT TCTTTACACG TTTTAAGGGA CGTTTTGGAC TATTCCTACT TTAATTATAA 541 AGTTAGTGGG TTTATGTTAA TAAGTCTAAT TACCTGGGGG TTAAAAGAGG TAACCTTGAG 601 TAAATTAGTG GGTTATTATT CCATCTTTTA TTCTTAATTA TATGCTAATT AGGGTAAAAG 661 AAGGAGGGTT TGAATAAGAA AAAGAAAAGA ACAGAAAGAG AGAGAAGGAG AATCGAT Predicted gene structure (within gDNA segment 96896 to 100848): Exon 1 99213 99750 ( 538 n); cDNA 160 716 ( 557 n); score: 0.771 PPA cDNA 19 1 MATCH C10HBa0115K16.1+ SGN-E550484- 0.771 538 0.750 C PGS_C10HBa0115K16.1+_SGN-E550484- (99213 99750) Alignment (genomic DNA sequence = upper lines): AATGTAACGA CCCGTTTAGT CGTTTTGAGC GGCAGACTTT ATTTTTGGAA AAACTGGCAG 99272 |||||||||| || ||||||| ||||||||| ||||| ||| |||||||||| |||| || | AATGTAACGA CCTGTTTAGT CGTTTTGAGT AGCAGATTTT ATTTTTGGAA AAACAGGTTG 219 AAGCGACGGA CCCCACGACG GACCATCATG GGCACGACGG ACCGTCGCAG GGTCTCGTTT 99332 | ||||||| ||||||||| |||| ||||| |||||| || ||||||| | ||||||||| AGACGACGGA ACCCACGACG GACCGTCATG AGCACGATGG ACCGTCGAGG AGTCTCGTTT 279 CAAAACACTT AGAAAATCTG AAATTGGGTA CTAAAAATCG ACTCTCTGAA CTTTGTGACG 99392 |||||||||| ||||| |||| |||||||||| |||||||||| |||||||||| ||| || ||| CAAAACACTT AGAAATTCTG AAATTGGGTA CTAAAAATCG ACTCTCTGAA CTTCGTAACG 339 GAATGGCAGG ACGGACCGTC A----C---A --GA-C--C- C-G------T GGTGGAAATT 99432 |||||||| | |||||||||| | | | || | | | | | |||||||| | GAATGGCACG ACGGACCGTC ACGGGCGTGA CGGACCGTCA CAGACTCTTT GGTGGAAA-T 398 TGGGTCTCTA AACTCTACGA CGACCTGCAG GACGGACCGT CGCAGGCACG ACGGCCCGTC 99492 || |||||| ||| | ||| |||||||||| |||||||||| |||||||||| |||| || || TGAGTCTCTG AACCTTGCGA CGACCTGCAG GACGGACCGT CGCAGGCACG ACGGGCCATC 458 AAAGGTTGCG CAAATCCCAG GCAGAGTCGG ATTTCTGGTT AAGTTTTAAG GGACGTTTTT 99552 | |||||||| |||||||| | | ||||| |||||| | |||||||| ||||||||| ACAGGTTGCG -TAATCCCAG TCTGGGTCGG ATTTCTTTAC ACGTTTTAAG GGACGTTTTG 517 GACTATTCTT GCCTTAATTA TAAAGTTCGT GGGTTTATAT TAATAACTCA AATTCTGGAG 99612 |||||||| | | ||||||| ||||||| || |||||||| | |||||| || |||| | GACTATTCCT ACTTTAATTA TAAAGTTAGT GGGTTTATGT TAATAAGTCT AATTACCTGG 577 GGGTTAAAAG AGGTAACCCT AAGTTAATTA GTGGGGTATT ATTGCCATCT TTTATTCTTA 99672 |||||||||| |||||||| | ||| ||||| ||||| |||| ||| |||||| |||||||||| GGGTTAAAAG AGGTAACCTT GAGTAAATTA GTGGGTTATT ATT-CCATCT TTTATTCTTA 636 ATTATATACT AATTAGGGTA AAAGAAAGAG GGTTGGAATA A-AGAAA-AT AGAAAGAACA 99730 ||||||| || |||||||||| |||||| ||| |||| ||||| | | ||| | | || | | ATTATATGCT AATTAGGGTA AAAGAAGGAG GGTTTGAATA AGAAAAAGAA AAGAACAGAA 696 AGAGAGAGAG GGAGAATCGA 99750 ||||||||| |||||||||| AGAGAGAGAA GGAGAATCGA 716 hqPGS_C10HBa0115K16.1+_SGN-E550484- (99213 99750) ******************************************************************************** EST sequence 161 -strand 713 n (File: SGN-E550211-) 1 TTTTTTTTTT TTTTATGAAT TAGCTCAATG AAAAATGAGT AAATTTTTTA TATTTTATGG 61 CATAATTTTT TCATTAATTC ATGGTTGAGA AAATCTTTGT TTCTAATAGT GTTATAAATC 121 GTAAAATAAT AATAATATTT AAGTAGGAAG AACATAAATG TAACGACCTG TTTAGTCGTT 181 TTGAGTAGCA GATTTTATTT TTGGAAAAAC AGGTTGAGAC GACGGAACCC ACGACGGACC 241 GTCATGAGCA CGATGGACCG TCGAGGAGTC TCGTTTCAAA ACACTTAGAA ATTCTGAAAT 301 TGGGTACTAA AAATCGACTC TCTGAACTTC GTAACGGAAT GGCACGACGG ACCGTCACGG 361 GCGTGACGGA CCGTCACAGA CTCTTTGGTG GAAATTGAGT CTCTGAACCT TGCGACGACC 421 TGCAGGACGG ACCGTCGCAG GCACGACGGG CCATCACAGG TTGCGTAATC CCAGTCTGGG 481 TCGGATTTCT TTACACGTTT TAAGGGACGT TTTGGACTAT TCCTACTTTA ATTATAAAGT 541 TAGTGGGTTT ATGTTAATAA GTCTAATTAC CTGGGGGTTA AAAGAGGTAA CCTTGAGTAA 601 ATTAGTGGGT TATTATTCCA TCTTTTATTC TTAATTATAT GCTAATTAGG GTAAAAGAAG 661 GAGGGTTGAA TAAGAAAAAG AAAAGAACAG AAAGAGAGAG AAGGAGAATC GAT Predicted gene structure (within gDNA segment 96926 to 100838): Exon 1 99213 99750 ( 538 n); cDNA 157 712 ( 556 n); score: 0.770 PPA cDNA 16 1 MATCH C10HBa0115K16.1+ SGN-E550211- 0.770 538 0.755 C PGS_C10HBa0115K16.1+_SGN-E550211- (99213 99750) Alignment (genomic DNA sequence = upper lines): AATGTAACGA CCCGTTTAGT CGTTTTGAGC GGCAGACTTT ATTTTTGGAA AAACTGGCAG 99272 |||||||||| || ||||||| ||||||||| ||||| ||| |||||||||| |||| || | AATGTAACGA CCTGTTTAGT CGTTTTGAGT AGCAGATTTT ATTTTTGGAA AAACAGGTTG 216 AAGCGACGGA CCCCACGACG GACCATCATG GGCACGACGG ACCGTCGCAG GGTCTCGTTT 99332 | ||||||| ||||||||| |||| ||||| |||||| || ||||||| | ||||||||| AGACGACGGA ACCCACGACG GACCGTCATG AGCACGATGG ACCGTCGAGG AGTCTCGTTT 276 CAAAACACTT AGAAAATCTG AAATTGGGTA CTAAAAATCG ACTCTCTGAA CTTTGTGACG 99392 |||||||||| ||||| |||| |||||||||| |||||||||| |||||||||| ||| || ||| CAAAACACTT AGAAATTCTG AAATTGGGTA CTAAAAATCG ACTCTCTGAA CTTCGTAACG 336 GAATGGCAGG ACGGACCGTC A----C---A --GA-C--C- C-G------T GGTGGAAATT 99432 |||||||| | |||||||||| | | | || | | | | | |||||||| | GAATGGCACG ACGGACCGTC ACGGGCGTGA CGGACCGTCA CAGACTCTTT GGTGGAAA-T 395 TGGGTCTCTA AACTCTACGA CGACCTGCAG GACGGACCGT CGCAGGCACG ACGGCCCGTC 99492 || |||||| ||| | ||| |||||||||| |||||||||| |||||||||| |||| || || TGAGTCTCTG AACCTTGCGA CGACCTGCAG GACGGACCGT CGCAGGCACG ACGGGCCATC 455 AAAGGTTGCG CAAATCCCAG GCAGAGTCGG ATTTCTGGTT AAGTTTTAAG GGACGTTTTT 99552 | |||||||| |||||||| | | ||||| |||||| | |||||||| ||||||||| ACAGGTTGCG -TAATCCCAG TCTGGGTCGG ATTTCTTTAC ACGTTTTAAG GGACGTTTTG 514 GACTATTCTT GCCTTAATTA TAAAGTTCGT GGGTTTATAT TAATAACTCA AATTCTGGAG 99612 |||||||| | | ||||||| ||||||| || |||||||| | |||||| || |||| | GACTATTCCT ACTTTAATTA TAAAGTTAGT GGGTTTATGT TAATAAGTCT AATTACCTGG 574 GGGTTAAAAG AGGTAACCCT AAGTTAATTA GTGGGGTATT ATTGCCATCT TTTATTCTTA 99672 |||||||||| |||||||| | ||| ||||| ||||| |||| ||| |||||| |||||||||| GGGTTAAAAG AGGTAACCTT GAGTAAATTA GTGGGTTATT ATT-CCATCT TTTATTCTTA 633 ATTATATACT AATTAGGGTA AAAGAAAGAG GGTTGGA-AT AAAGAAAATA GAAAGAACAA 99731 ||||||| || |||||||||| |||||| ||| ||||| | | || || | | || | || ATTATATGCT AATTAGGGTA AAAGAAGGAG GGTTGAATAA GAAAAAGAAA AGAACAGAAA 693 GAGAGAGAGG GAGAATCGA 99750 |||||||| | ||||||||| GAGAGAGAAG GAGAATCGA 712 hqPGS_C10HBa0115K16.1+_SGN-E550211- (99213 99750) ******************************************************************************** EST sequence 163 -strand 713 n (File: SGN-E550464-) 1 TTTTTTTTTT TTTTATGAAT TAGCTCAATG AAAAATGAGT AAATTTTTTA TATCTTATGG 61 CATAATTTTT CATTAATTCA TGGTAGAGAA AATCTTTGTT TCTAATAGTG TTATAAATCG 121 TAAAATAATA ATAATATTTA AGTAGGAAGA ACATAAATGT ANCGACCTGT TTAGTCGTTT 181 TGAGTAGCAG ATTTTATTTT TGGAAAAACA GGTTGAGACG ACGGAACCCA CGACGGACCG 241 TCATGAGCAC GATGGACCGT CGAGGAGTCT CGTTTCAAAA CACTTAGAAA TTCTGAAATT 301 GGGTACTAAA AATCGACTCT CTGAACTTCG TAACGGAATG GCACGACGGA CCGTCACGGG 361 CGTGACGGAC CGTCACAGAC TCTTTGGTGG AAATTGAGTC TCTGAACCTT GCGACGACCT 421 GCAGGACGGA CCGTCGCAGG CACGACGGGC CATCACAGGT TGCGTAATCC CAGTCTGGGT 481 CGGATTTCTT TACACGTTTT AAGGGACGTT TTGGACTATT CCTACTTTAA TTATAAAGTT 541 AGTGGGTTTA TGTTAATAAG TCTAATTACC TGGGGGTTAA AAGAGGTAAC CTTGAGTAAA 601 TTAGTGGGTT ATTATTCCAT CTTTTATTCT TAATTATATG CTAATTAGGG TAAAAGAAGG 661 AGGGTTTGAA TAAGAAAAAG AAAAGAACAG AAAGAGAGAG AAGGAGAATC GAT Predicted gene structure (within gDNA segment 96936 to 100848): Exon 1 99213 99750 ( 538 n); cDNA 156 712 ( 557 n); score: 0.770 PPA cDNA 16 1 MATCH C10HBa0115K16.1+ SGN-E550464- 0.770 538 0.755 C PGS_C10HBa0115K16.1+_SGN-E550464- (99213 99750) Alignment (genomic DNA sequence = upper lines): AATGTAACGA CCCGTTTAGT CGTTTTGAGC GGCAGACTTT ATTTTTGGAA AAACTGGCAG 99272 |||||| ||| || ||||||| ||||||||| ||||| ||| |||||||||| |||| || | AATGTANCGA CCTGTTTAGT CGTTTTGAGT AGCAGATTTT ATTTTTGGAA AAACAGGTTG 215 AAGCGACGGA CCCCACGACG GACCATCATG GGCACGACGG ACCGTCGCAG GGTCTCGTTT 99332 | ||||||| ||||||||| |||| ||||| |||||| || ||||||| | ||||||||| AGACGACGGA ACCCACGACG GACCGTCATG AGCACGATGG ACCGTCGAGG AGTCTCGTTT 275 CAAAACACTT AGAAAATCTG AAATTGGGTA CTAAAAATCG ACTCTCTGAA CTTTGTGACG 99392 |||||||||| ||||| |||| |||||||||| |||||||||| |||||||||| ||| || ||| CAAAACACTT AGAAATTCTG AAATTGGGTA CTAAAAATCG ACTCTCTGAA CTTCGTAACG 335 GAATGGCAGG ACGGACCGTC A----C---A --GA-C--C- C-G------T GGTGGAAATT 99432 |||||||| | |||||||||| | | | || | | | | | |||||||| | GAATGGCACG ACGGACCGTC ACGGGCGTGA CGGACCGTCA CAGACTCTTT GGTGGAAA-T 394 TGGGTCTCTA AACTCTACGA CGACCTGCAG GACGGACCGT CGCAGGCACG ACGGCCCGTC 99492 || |||||| ||| | ||| |||||||||| |||||||||| |||||||||| |||| || || TGAGTCTCTG AACCTTGCGA CGACCTGCAG GACGGACCGT CGCAGGCACG ACGGGCCATC 454 AAAGGTTGCG CAAATCCCAG GCAGAGTCGG ATTTCTGGTT AAGTTTTAAG GGACGTTTTT 99552 | |||||||| |||||||| | | ||||| |||||| | |||||||| ||||||||| ACAGGTTGCG -TAATCCCAG TCTGGGTCGG ATTTCTTTAC ACGTTTTAAG GGACGTTTTG 513 GACTATTCTT GCCTTAATTA TAAAGTTCGT GGGTTTATAT TAATAACTCA AATTCTGGAG 99612 |||||||| | | ||||||| ||||||| || |||||||| | |||||| || |||| | GACTATTCCT ACTTTAATTA TAAAGTTAGT GGGTTTATGT TAATAAGTCT AATTACCTGG 573 GGGTTAAAAG AGGTAACCCT AAGTTAATTA GTGGGGTATT ATTGCCATCT TTTATTCTTA 99672 |||||||||| |||||||| | ||| ||||| ||||| |||| ||| |||||| |||||||||| GGGTTAAAAG AGGTAACCTT GAGTAAATTA GTGGGTTATT ATT-CCATCT TTTATTCTTA 632 ATTATATACT AATTAGGGTA AAAGAAAGAG GGTTGGAATA A-AGAAA-AT AGAAAGAACA 99730 ||||||| || |||||||||| |||||| ||| |||| ||||| | | ||| | | || | | ATTATATGCT AATTAGGGTA AAAGAAGGAG GGTTTGAATA AGAAAAAGAA AAGAACAGAA 692 AGAGAGAGAG GGAGAATCGA 99750 ||||||||| |||||||||| AGAGAGAGAA GGAGAATCGA 712 hqPGS_C10HBa0115K16.1+_SGN-E550464- (99213 99750) ******************************************************************************** EST sequence 165 -strand 713 n (File: SGN-E549941-) 1 TTTTTTTTTT TTTATGAATT AGCTCAATGA AAAATGAGTA AATTTTTTAT ATTTTGATGG 61 CATAATTTTT CATTAATCAT NGGTCGAGAA AATCTTTGTT TCTAATAGTG TTATAAATCG 121 TAAAATAATA ATAATATTTA AGTAGGAAGA ACATAAATGT AACGACCTGT TTAGTCGTTT 181 TGAGTAGCAG ATATTATTTT TGGAAAAACA GGTTGAGACG ACGGAACCCA CGACGGACCG 241 TCATGAGCAC GATGGACCGT CGAGGAGTCT CGTTTCAAAA CACTTAGAAA TTCTGAAATT 301 GGGTACTAAA AATCGACTCT CTGAACTTCG TAACGGAATG GCACGACGGA CCGTCACGGG 361 CGTGACGGAC CGTCACAGAC TCTTTGGTGG AAATTGAGTC TCTGAACCTT GCGACGACCT 421 GCAGGACGGA CCGTCGCAGG CACGACGGGC CATCACAGGT TGCGTAATCC CAGTCTGGGT 481 CGGATTTCTT TACACGTTTT AAGGGACGTT TTGGACTATT CCTACTTTAA TTATAAAGTT 541 AGTGGGTTTA TGTTAATAAG TCTAATTACC TGGGGGTTAA AAGAGGTAAC CTTGAGTAAA 601 TTAGTGGGTT ATTATTCCAT CTTTTATTCT TAATTATATG CTAATTAGGG TAAAAGAAGG 661 AGGGTTTGAA TAAGAAAAAG AAAAGAACAG AAAGAGAGAG AAGGAGAATC GAT Predicted gene structure (within gDNA segment 96936 to 100848): Exon 1 99213 99750 ( 538 n); cDNA 156 712 ( 557 n); score: 0.770 PPA cDNA 15 1 MATCH C10HBa0115K16.1+ SGN-E549941- 0.770 538 0.755 C PGS_C10HBa0115K16.1+_SGN-E549941- (99213 99750) Alignment (genomic DNA sequence = upper lines): AATGTAACGA CCCGTTTAGT CGTTTTGAGC GGCAGACTTT ATTTTTGGAA AAACTGGCAG 99272 |||||||||| || ||||||| ||||||||| ||||| || |||||||||| |||| || | AATGTAACGA CCTGTTTAGT CGTTTTGAGT AGCAGATATT ATTTTTGGAA AAACAGGTTG 215 AAGCGACGGA CCCCACGACG GACCATCATG GGCACGACGG ACCGTCGCAG GGTCTCGTTT 99332 | ||||||| ||||||||| |||| ||||| |||||| || ||||||| | ||||||||| AGACGACGGA ACCCACGACG GACCGTCATG AGCACGATGG ACCGTCGAGG AGTCTCGTTT 275 CAAAACACTT AGAAAATCTG AAATTGGGTA CTAAAAATCG ACTCTCTGAA CTTTGTGACG 99392 |||||||||| ||||| |||| |||||||||| |||||||||| |||||||||| ||| || ||| CAAAACACTT AGAAATTCTG AAATTGGGTA CTAAAAATCG ACTCTCTGAA CTTCGTAACG 335 GAATGGCAGG ACGGACCGTC A----C---A --GA-C--C- C-G------T GGTGGAAATT 99432 |||||||| | |||||||||| | | | || | | | | | |||||||| | GAATGGCACG ACGGACCGTC ACGGGCGTGA CGGACCGTCA CAGACTCTTT GGTGGAAA-T 394 TGGGTCTCTA AACTCTACGA CGACCTGCAG GACGGACCGT CGCAGGCACG ACGGCCCGTC 99492 || |||||| ||| | ||| |||||||||| |||||||||| |||||||||| |||| || || TGAGTCTCTG AACCTTGCGA CGACCTGCAG GACGGACCGT CGCAGGCACG ACGGGCCATC 454 AAAGGTTGCG CAAATCCCAG GCAGAGTCGG ATTTCTGGTT AAGTTTTAAG GGACGTTTTT 99552 | |||||||| |||||||| | | ||||| |||||| | |||||||| ||||||||| ACAGGTTGCG -TAATCCCAG TCTGGGTCGG ATTTCTTTAC ACGTTTTAAG GGACGTTTTG 513 GACTATTCTT GCCTTAATTA TAAAGTTCGT GGGTTTATAT TAATAACTCA AATTCTGGAG 99612 |||||||| | | ||||||| ||||||| || |||||||| | |||||| || |||| | GACTATTCCT ACTTTAATTA TAAAGTTAGT GGGTTTATGT TAATAAGTCT AATTACCTGG 573 GGGTTAAAAG AGGTAACCCT AAGTTAATTA GTGGGGTATT ATTGCCATCT TTTATTCTTA 99672 |||||||||| |||||||| | ||| ||||| ||||| |||| ||| |||||| |||||||||| GGGTTAAAAG AGGTAACCTT GAGTAAATTA GTGGGTTATT ATT-CCATCT TTTATTCTTA 632 ATTATATACT AATTAGGGTA AAAGAAAGAG GGTTGGAATA A-AGAAA-AT AGAAAGAACA 99730 ||||||| || |||||||||| |||||| ||| |||| ||||| | | ||| | | || | | ATTATATGCT AATTAGGGTA AAAGAAGGAG GGTTTGAATA AGAAAAAGAA AAGAACAGAA 692 AGAGAGAGAG GGAGAATCGA 99750 ||||||||| |||||||||| AGAGAGAGAA GGAGAATCGA 712 hqPGS_C10HBa0115K16.1+_SGN-E549941- (99213 99750) ******************************************************************************** EST sequence 167 -strand 714 n (File: SGN-E550025-) 1 TTTTTTTTTT TTTTATGAAT TAGCTCAATG AAAAATGAGT AAATTTTTTA TATTTTATGG 61 CATAATTTTT TCATTAATTC ATGGTTGAGA AAATCTTTGT TTCTAATAGT GTTATAAATC 121 GTAAAATAAT AATAATATTT AAGTAGGAAG AACATAAATG TAACGACCTG TTTAGTCGTT 181 TTGAGTAGCA GATTTTATTT TTGGAAAAAC AGGTTGAGAC GACGGAACCC ACGACGGACC 241 GTCATGAGCA CGATGGACCG TCGAGGAGTC TCGTTTCAAA ACACTTAGAA ATTCTGAAAT 301 TGGGTACTAA AAATCGACTC TCTGAACTTC GTAACGGAAT GGCACGACGG ACCGTCACGG 361 GCGTGACGGA CCGTCACAGA CTCTTTGGTG GAAATTGAGT CTCTGAACCT TGCGACGACC 421 TGCAGGACGG ACCGTCGCAG GCACGACGGG CCATCACAGG TTGCGTAATC CCAGTCTGGG 481 TCGGATTTCT TTACACGTTT TAAGGGACGT TTTGGACTAT TCCTACTTTA ATTATAAAGT 541 TAGTGGGTTT ATGTTAATAA GTCTAATTAC CTGGGGGTTA AAAGAGGTAA CCTTGAGTAA 601 ATTAGTGGGT TATTATTCCA TCTTTTATTC TTAATTATAT GCTAATTAGG GTAAAAGAAG 661 GAGGGTTTGA ATAAGAAAAA GAAAAGAACA GAAAGAGAGA GAAGGAGAAT CGAT Predicted gene structure (within gDNA segment 96926 to 100848): Exon 1 99213 99750 ( 538 n); cDNA 157 713 ( 557 n); score: 0.771 PPA cDNA 16 1 MATCH C10HBa0115K16.1+ SGN-E550025- 0.771 538 0.754 C PGS_C10HBa0115K16.1+_SGN-E550025- (99213 99750) Alignment (genomic DNA sequence = upper lines): AATGTAACGA CCCGTTTAGT CGTTTTGAGC GGCAGACTTT ATTTTTGGAA AAACTGGCAG 99272 |||||||||| || ||||||| ||||||||| ||||| ||| |||||||||| |||| || | AATGTAACGA CCTGTTTAGT CGTTTTGAGT AGCAGATTTT ATTTTTGGAA AAACAGGTTG 216 AAGCGACGGA CCCCACGACG GACCATCATG GGCACGACGG ACCGTCGCAG GGTCTCGTTT 99332 | ||||||| ||||||||| |||| ||||| |||||| || ||||||| | ||||||||| AGACGACGGA ACCCACGACG GACCGTCATG AGCACGATGG ACCGTCGAGG AGTCTCGTTT 276 CAAAACACTT AGAAAATCTG AAATTGGGTA CTAAAAATCG ACTCTCTGAA CTTTGTGACG 99392 |||||||||| ||||| |||| |||||||||| |||||||||| |||||||||| ||| || ||| CAAAACACTT AGAAATTCTG AAATTGGGTA CTAAAAATCG ACTCTCTGAA CTTCGTAACG 336 GAATGGCAGG ACGGACCGTC A----C---A --GA-C--C- C-G------T GGTGGAAATT 99432 |||||||| | |||||||||| | | | || | | | | | |||||||| | GAATGGCACG ACGGACCGTC ACGGGCGTGA CGGACCGTCA CAGACTCTTT GGTGGAAA-T 395 TGGGTCTCTA AACTCTACGA CGACCTGCAG GACGGACCGT CGCAGGCACG ACGGCCCGTC 99492 || |||||| ||| | ||| |||||||||| |||||||||| |||||||||| |||| || || TGAGTCTCTG AACCTTGCGA CGACCTGCAG GACGGACCGT CGCAGGCACG ACGGGCCATC 455 AAAGGTTGCG CAAATCCCAG GCAGAGTCGG ATTTCTGGTT AAGTTTTAAG GGACGTTTTT 99552 | |||||||| |||||||| | | ||||| |||||| | |||||||| ||||||||| ACAGGTTGCG -TAATCCCAG TCTGGGTCGG ATTTCTTTAC ACGTTTTAAG GGACGTTTTG 514 GACTATTCTT GCCTTAATTA TAAAGTTCGT GGGTTTATAT TAATAACTCA AATTCTGGAG 99612 |||||||| | | ||||||| ||||||| || |||||||| | |||||| || |||| | GACTATTCCT ACTTTAATTA TAAAGTTAGT GGGTTTATGT TAATAAGTCT AATTACCTGG 574 GGGTTAAAAG AGGTAACCCT AAGTTAATTA GTGGGGTATT ATTGCCATCT TTTATTCTTA 99672 |||||||||| |||||||| | ||| ||||| ||||| |||| ||| |||||| |||||||||| GGGTTAAAAG AGGTAACCTT GAGTAAATTA GTGGGTTATT ATT-CCATCT TTTATTCTTA 633 ATTATATACT AATTAGGGTA AAAGAAAGAG GGTTGGAATA A-AGAAA-AT AGAAAGAACA 99730 ||||||| || |||||||||| |||||| ||| |||| ||||| | | ||| | | || | | ATTATATGCT AATTAGGGTA AAAGAAGGAG GGTTTGAATA AGAAAAAGAA AAGAACAGAA 693 AGAGAGAGAG GGAGAATCGA 99750 ||||||||| |||||||||| AGAGAGAGAA GGAGAATCGA 713 hqPGS_C10HBa0115K16.1+_SGN-E550025- (99213 99750) ******************************************************************************** EST sequence 174 -strand 558 n (File: SGN-E231589-) 1 AAATGTAACG ACCTGTTTAG TCGTTTTGAG TAGCAGATTT TATTTTTGGA AAAACAGGTT 61 GAGACGACGG AACCCACGAC GGACCGTCAT GAGCACGATG GACCGTCGAG GAGTCTCGTT 121 TCAAAACACT TAGAAATTCT GAAATTGGGT ACTAAAAATC GACTCTCTGA ACTTCGTAAC 181 GGAATGGCAC GACGGACCGT CACGGGCGTG ACGGACCGTC ACAGACTCTT TGGTGGAAAT 241 TGAGTCTATG AACCTTGCGA CGACCTGCAG GACGGACCGT CGCAGGCACG ACGGGCCATC 301 ACAGGTTGCG TAATCCCAGT CTGGGTCGGA TTTCTTTACA CGTTTTAAGG GACGTTTTGG 361 ACTATTCCTA CTTTAATTAT AAAGTTAGTG GGTTTATGTT AATAAGTCTA ATTACCTGGG 421 GGTTAAAAGA GGTAACCTTG AGTAAATTAG TGGGTTATTA TTCCATCTTT TATTCTTAAT 481 TATATGCTAA TTAGGGTAAA AGAAGGAGGG TTTGAATAAG AAAAAGAAAA GAACAGAAAG 541 AGAGAGAAGG AGAATCGA Predicted gene structure (within gDNA segment 98476 to 100838): Exon 1 99213 99750 ( 538 n); cDNA 2 558 ( 557 n); score: 0.770 MATCH C10HBa0115K16.1+ SGN-E231589- 0.770 538 0.964 C PGS_C10HBa0115K16.1+_SGN-E231589- (99213 99750) Alignment (genomic DNA sequence = upper lines): AATGTAACGA CCCGTTTAGT CGTTTTGAGC GGCAGACTTT ATTTTTGGAA AAACTGGCAG 99272 |||||||||| || ||||||| ||||||||| ||||| ||| |||||||||| |||| || | AATGTAACGA CCTGTTTAGT CGTTTTGAGT AGCAGATTTT ATTTTTGGAA AAACAGGTTG 61 AAGCGACGGA CCCCACGACG GACCATCATG GGCACGACGG ACCGTCGCAG GGTCTCGTTT 99332 | ||||||| ||||||||| |||| ||||| |||||| || ||||||| | ||||||||| AGACGACGGA ACCCACGACG GACCGTCATG AGCACGATGG ACCGTCGAGG AGTCTCGTTT 121 CAAAACACTT AGAAAATCTG AAATTGGGTA CTAAAAATCG ACTCTCTGAA CTTTGTGACG 99392 |||||||||| ||||| |||| |||||||||| |||||||||| |||||||||| ||| || ||| CAAAACACTT AGAAATTCTG AAATTGGGTA CTAAAAATCG ACTCTCTGAA CTTCGTAACG 181 GAATGGCAGG ACGGACCGTC A----C---A --GA-C--C- C-G------T GGTGGAAATT 99432 |||||||| | |||||||||| | | | || | | | | | |||||||| | GAATGGCACG ACGGACCGTC ACGGGCGTGA CGGACCGTCA CAGACTCTTT GGTGGAAA-T 240 TGGGTCTCTA AACTCTACGA CGACCTGCAG GACGGACCGT CGCAGGCACG ACGGCCCGTC 99492 || |||| | ||| | ||| |||||||||| |||||||||| |||||||||| |||| || || TGAGTCTATG AACCTTGCGA CGACCTGCAG GACGGACCGT CGCAGGCACG ACGGGCCATC 300 AAAGGTTGCG CAAATCCCAG GCAGAGTCGG ATTTCTGGTT AAGTTTTAAG GGACGTTTTT 99552 | |||||||| |||||||| | | ||||| |||||| | |||||||| ||||||||| ACAGGTTGCG -TAATCCCAG TCTGGGTCGG ATTTCTTTAC ACGTTTTAAG GGACGTTTTG 359 GACTATTCTT GCCTTAATTA TAAAGTTCGT GGGTTTATAT TAATAACTCA AATTCTGGAG 99612 |||||||| | | ||||||| ||||||| || |||||||| | |||||| || |||| | GACTATTCCT ACTTTAATTA TAAAGTTAGT GGGTTTATGT TAATAAGTCT AATTACCTGG 419 GGGTTAAAAG AGGTAACCCT AAGTTAATTA GTGGGGTATT ATTGCCATCT TTTATTCTTA 99672 |||||||||| |||||||| | ||| ||||| ||||| |||| ||| |||||| |||||||||| GGGTTAAAAG AGGTAACCTT GAGTAAATTA GTGGGTTATT ATT-CCATCT TTTATTCTTA 478 ATTATATACT AATTAGGGTA AAAGAAAGAG GGTTGGAATA A-AGAAA-AT AGAAAGAACA 99730 ||||||| || |||||||||| |||||| ||| |||| ||||| | | ||| | | || | | ATTATATGCT AATTAGGGTA AAAGAAGGAG GGTTTGAATA AGAAAAAGAA AAGAACAGAA 538 AGAGAGAGAG GGAGAATCGA 99750 ||||||||| |||||||||| AGAGAGAGAA GGAGAATCGA 558 hqPGS_C10HBa0115K16.1+_SGN-E231589- (99213 99750) ******************************************************************************** EST sequence 208 -strand 649 n (File: SGN-E374999-) 1 ATTTTTTCAT TAATTCAGGG TGAAGAAAAT CTTTGTTTCT AATAGTGTTA TAAATCGTAA 61 AATAATAATA ATATTTAAGT AGGAAGAACA TAAATGTAAC GACCTGTTTA GTCGTTTGGA 121 GTAGCAGATT TTATTTTTGG AAAAACAGGT TGAGACGACG GAACCCACGA CGGACCGTCA 181 TGAGCACGAT GGACCGTCGA GGAGTCTCGT TTCAAAACAC TTAGAAATTC TGAAATTGGG 241 TACTAAAAAT CGACTCTCTG AACTTCGTAA CGGAATGGCA CGACGGACCG TCACGGGCGT 301 GACGGACCGT CACAGACTCT TTGGTGGAAA TTGAGTCTCT GAACCTTGCG ACGACCTGCA 361 GGACGGACCG TCGCAGGCAC GACGGGCCAT CACAGGTTGC GTAATCCCAG TCTGGGTCGG 421 ATTTCTTTAC ACGTTTTAAG GGACGTTTTG GACTATTCCT ACTTTAATTA TAAAGTTAGT 481 GGGTTTATGT TAATAAGTCT AATTACCTGG GGGTTAAAAG AGGTAACCTT GAGTAAATTA 541 GTGGGTTATT ATTCCATCTT TTATTCTTAA TTATATGCTA ATTAGGGTAA AAGAAGGAGG 601 GTTTGAATAA GAAAAAGAAA AGAACAGAAA GAGAGAGAAG GAGAATCGA Predicted gene structure (within gDNA segment 96684 to 100838): Exon 1 99213 99750 ( 538 n); cDNA 93 649 ( 557 n); score: 0.770 MATCH C10HBa0115K16.1+ SGN-E374999- 0.770 538 0.829 C PGS_C10HBa0115K16.1+_SGN-E374999- (99213 99750) Alignment (genomic DNA sequence = upper lines): AATGTAACGA CCCGTTTAGT CGTTTTGAGC GGCAGACTTT ATTTTTGGAA AAACTGGCAG 99272 |||||||||| || ||||||| ||||| ||| ||||| ||| |||||||||| |||| || | AATGTAACGA CCTGTTTAGT CGTTTGGAGT AGCAGATTTT ATTTTTGGAA AAACAGGTTG 152 AAGCGACGGA CCCCACGACG GACCATCATG GGCACGACGG ACCGTCGCAG GGTCTCGTTT 99332 | ||||||| ||||||||| |||| ||||| |||||| || ||||||| | ||||||||| AGACGACGGA ACCCACGACG GACCGTCATG AGCACGATGG ACCGTCGAGG AGTCTCGTTT 212 CAAAACACTT AGAAAATCTG AAATTGGGTA CTAAAAATCG ACTCTCTGAA CTTTGTGACG 99392 |||||||||| ||||| |||| |||||||||| |||||||||| |||||||||| ||| || ||| CAAAACACTT AGAAATTCTG AAATTGGGTA CTAAAAATCG ACTCTCTGAA CTTCGTAACG 272 GAATGGCAGG ACGGACCGTC A----C---A --GA-C--C- C-G------T GGTGGAAATT 99432 |||||||| | |||||||||| | | | || | | | | | |||||||| | GAATGGCACG ACGGACCGTC ACGGGCGTGA CGGACCGTCA CAGACTCTTT GGTGGAAA-T 331 TGGGTCTCTA AACTCTACGA CGACCTGCAG GACGGACCGT CGCAGGCACG ACGGCCCGTC 99492 || |||||| ||| | ||| |||||||||| |||||||||| |||||||||| |||| || || TGAGTCTCTG AACCTTGCGA CGACCTGCAG GACGGACCGT CGCAGGCACG ACGGGCCATC 391 AAAGGTTGCG CAAATCCCAG GCAGAGTCGG ATTTCTGGTT AAGTTTTAAG GGACGTTTTT 99552 | |||||||| |||||||| | | ||||| |||||| | |||||||| ||||||||| ACAGGTTGCG -TAATCCCAG TCTGGGTCGG ATTTCTTTAC ACGTTTTAAG GGACGTTTTG 450 GACTATTCTT GCCTTAATTA TAAAGTTCGT GGGTTTATAT TAATAACTCA AATTCTGGAG 99612 |||||||| | | ||||||| ||||||| || |||||||| | |||||| || |||| | GACTATTCCT ACTTTAATTA TAAAGTTAGT GGGTTTATGT TAATAAGTCT AATTACCTGG 510 GGGTTAAAAG AGGTAACCCT AAGTTAATTA GTGGGGTATT ATTGCCATCT TTTATTCTTA 99672 |||||||||| |||||||| | ||| ||||| ||||| |||| ||| |||||| |||||||||| GGGTTAAAAG AGGTAACCTT GAGTAAATTA GTGGGTTATT ATT-CCATCT TTTATTCTTA 569 ATTATATACT AATTAGGGTA AAAGAAAGAG GGTTGGAATA A-AGAAA-AT AGAAAGAACA 99730 ||||||| || |||||||||| |||||| ||| |||| ||||| | | ||| | | || | | ATTATATGCT AATTAGGGTA AAAGAAGGAG GGTTTGAATA AGAAAAAGAA AAGAACAGAA 629 AGAGAGAGAG GGAGAATCGA 99750 ||||||||| |||||||||| AGAGAGAGAA GGAGAATCGA 649 hqPGS_C10HBa0115K16.1+_SGN-E374999- (99213 99750) ******************************************************************************** EST sequence 214 -strand 711 n (File: SGN-E396039-) 1 TTTTTTTTTT TGAATTAGCT CCAAGAAAAA ATGAGTAAAT TTTTTTTATT TTTATGGCAT 61 AATTTTTTCA TTAATTCATG GTGGAGAAAA TCTTTGTTTT TAATAGTGTT ATAAATCGTA 121 AAATAATAAT AATATTTAAG TAGGAAGAAC ATAAATGTAA CGACCTGTTT AGTCGTTTTG 181 AGTAGCAGAT TTTATTTTTG GAAAAACAGG TTGAGACGAC GGAACCCACG ACGGACCGTC 241 ATGAGCACGA TGGACCGTCG AGGAGTCTCG TTTCAAAACA CTTAGAAATT CTGAAATTGG 301 GTACTAAAAA TCGACTCTCT GAACTTCGTA ACGGAATGGC ACGACGGACC GTCACGGGCG 361 TGACGGACCG TCACAGACTC TTTGGTGGAA ATTGAGTCTC TGAACCTTGC GACGACCTGC 421 AGGACGGACC GTCGCAGGCA CGACGGGCCA TCACAGGTTG CGTAATCCCA GTCTGGGTCG 481 GATTTCTTTA CACGTTTTAA GGGACGTTTT GGACTATTCC TACTTTAATT ATAAAGTTAG 541 TGGGTTTATG TTAATAAGTC TAATTACCTG GGGGTTAAAA GAGGTAACCT TGAGTAAATT 601 AGTGGGTTAT TATTCCATCT TTTATTCTTA ATTATATGCT AATTAGGGTA AAAGAAGGAG 661 GGTTTGAATA AGAAAAAGAA AAGAACAGAA AGAGAGAGAA GGAGAATCGA T Predicted gene structure (within gDNA segment 96956 to 100848): Exon 1 99213 99750 ( 538 n); cDNA 154 710 ( 557 n); score: 0.771 PPA cDNA 50 40 MATCH C10HBa0115K16.1+ SGN-E396039- 0.771 538 0.757 C PGS_C10HBa0115K16.1+_SGN-E396039- (99213 99750) Alignment (genomic DNA sequence = upper lines): AATGTAACGA CCCGTTTAGT CGTTTTGAGC GGCAGACTTT ATTTTTGGAA AAACTGGCAG 99272 |||||||||| || ||||||| ||||||||| ||||| ||| |||||||||| |||| || | AATGTAACGA CCTGTTTAGT CGTTTTGAGT AGCAGATTTT ATTTTTGGAA AAACAGGTTG 213 AAGCGACGGA CCCCACGACG GACCATCATG GGCACGACGG ACCGTCGCAG GGTCTCGTTT 99332 | ||||||| ||||||||| |||| ||||| |||||| || ||||||| | ||||||||| AGACGACGGA ACCCACGACG GACCGTCATG AGCACGATGG ACCGTCGAGG AGTCTCGTTT 273 CAAAACACTT AGAAAATCTG AAATTGGGTA CTAAAAATCG ACTCTCTGAA CTTTGTGACG 99392 |||||||||| ||||| |||| |||||||||| |||||||||| |||||||||| ||| || ||| CAAAACACTT AGAAATTCTG AAATTGGGTA CTAAAAATCG ACTCTCTGAA CTTCGTAACG 333 GAATGGCAGG ACGGACCGTC A----C---A --GA-C--C- C-G------T GGTGGAAATT 99432 |||||||| | |||||||||| | | | || | | | | | |||||||| | GAATGGCACG ACGGACCGTC ACGGGCGTGA CGGACCGTCA CAGACTCTTT GGTGGAAA-T 392 TGGGTCTCTA AACTCTACGA CGACCTGCAG GACGGACCGT CGCAGGCACG ACGGCCCGTC 99492 || |||||| ||| | ||| |||||||||| |||||||||| |||||||||| |||| || || TGAGTCTCTG AACCTTGCGA CGACCTGCAG GACGGACCGT CGCAGGCACG ACGGGCCATC 452 AAAGGTTGCG CAAATCCCAG GCAGAGTCGG ATTTCTGGTT AAGTTTTAAG GGACGTTTTT 99552 | |||||||| |||||||| | | ||||| |||||| | |||||||| ||||||||| ACAGGTTGCG -TAATCCCAG TCTGGGTCGG ATTTCTTTAC ACGTTTTAAG GGACGTTTTG 511 GACTATTCTT GCCTTAATTA TAAAGTTCGT GGGTTTATAT TAATAACTCA AATTCTGGAG 99612 |||||||| | | ||||||| ||||||| || |||||||| | |||||| || |||| | GACTATTCCT ACTTTAATTA TAAAGTTAGT GGGTTTATGT TAATAAGTCT AATTACCTGG 571 GGGTTAAAAG AGGTAACCCT AAGTTAATTA GTGGGGTATT ATTGCCATCT TTTATTCTTA 99672 |||||||||| |||||||| | ||| ||||| ||||| |||| ||| |||||| |||||||||| GGGTTAAAAG AGGTAACCTT GAGTAAATTA GTGGGTTATT ATT-CCATCT TTTATTCTTA 630 ATTATATACT AATTAGGGTA AAAGAAAGAG GGTTGGAATA A-AGAAA-AT AGAAAGAACA 99730 ||||||| || |||||||||| |||||| ||| |||| ||||| | | ||| | | || | | ATTATATGCT AATTAGGGTA AAAGAAGGAG GGTTTGAATA AGAAAAAGAA AAGAACAGAA 690 AGAGAGAGAG GGAGAATCGA 99750 ||||||||| |||||||||| AGAGAGAGAA GGAGAATCGA 710 hqPGS_C10HBa0115K16.1+_SGN-E396039- (99213 99750) ******************************************************************************** EST sequence 218 -strand 711 n (File: SGN-E396056-) 1 TTTTTTTTTT ATGAATTAGC TCAAAGAAAA AATGAGTAAA TTTTTATTAT TTTATGGCAT 61 AATTTTTTCA TTAATTCATG GGTGAGAAAA TTTTTGTTTC TAATAGTGTT ATAAATCGTA 121 AAATAATAAT AATATTTAAG TAGGAAGAAC ATAAATGTAA CGACCTGTTT AGTCGTTTTG 181 AGTAGCAGAT TTTATTTTTG GAAAAACAGG TTGAGACGAC GGAACCCACG ACGGACCGTC 241 ATGAGCACGA TGGACCGTCG AGGAGTCTCG TTTCAAAACA CTTAGAAATT CTGAAATTGG 301 GTACTAAAAA TCGACTCTCT GAACTTCGTA ACGGAATGGC ACGACGGACC GTCACGGGCG 361 TGACGGACCG TCACAGACTC TTTGGTGGAA ATTGAGTCTC TGAACCTTGC GACGACCTGC 421 AGGACGGACC GTCGCAGGCA CGACGGGCCA TCACAGGTTG CGTAATCCCA GTCTGGGTCG 481 GATTTCTTTA CACGTTTTAA GGGACGTTTT GGACTATTCC TACTTTAATT ATAAAGTTAG 541 TGGGTTTATG TTAATAAGTC TAATTACCTG GGGGTTAAAA GAGGTAACCT TGAGTAAATT 601 AGTGGGTTAT TATTCCATCT TTTATTCTTA ATTATATGCT AATTAGGGTA AAAGAAGGAG 661 GGTTTGAATA AGAAAAAGAA AAGAACAGAA AGAGAGAGAA GGAGAATCGA T Predicted gene structure (within gDNA segment 96956 to 100848): Exon 1 99213 99750 ( 538 n); cDNA 154 710 ( 557 n); score: 0.771 PPA cDNA 12 1 MATCH C10HBa0115K16.1+ SGN-E396056- 0.771 538 0.757 C PGS_C10HBa0115K16.1+_SGN-E396056- (99213 99750) Alignment (genomic DNA sequence = upper lines): AATGTAACGA CCCGTTTAGT CGTTTTGAGC GGCAGACTTT ATTTTTGGAA AAACTGGCAG 99272 |||||||||| || ||||||| ||||||||| ||||| ||| |||||||||| |||| || | AATGTAACGA CCTGTTTAGT CGTTTTGAGT AGCAGATTTT ATTTTTGGAA AAACAGGTTG 213 AAGCGACGGA CCCCACGACG GACCATCATG GGCACGACGG ACCGTCGCAG GGTCTCGTTT 99332 | ||||||| ||||||||| |||| ||||| |||||| || ||||||| | ||||||||| AGACGACGGA ACCCACGACG GACCGTCATG AGCACGATGG ACCGTCGAGG AGTCTCGTTT 273 CAAAACACTT AGAAAATCTG AAATTGGGTA CTAAAAATCG ACTCTCTGAA CTTTGTGACG 99392 |||||||||| ||||| |||| |||||||||| |||||||||| |||||||||| ||| || ||| CAAAACACTT AGAAATTCTG AAATTGGGTA CTAAAAATCG ACTCTCTGAA CTTCGTAACG 333 GAATGGCAGG ACGGACCGTC A----C---A --GA-C--C- C-G------T GGTGGAAATT 99432 |||||||| | |||||||||| | | | || | | | | | |||||||| | GAATGGCACG ACGGACCGTC ACGGGCGTGA CGGACCGTCA CAGACTCTTT GGTGGAAA-T 392 TGGGTCTCTA AACTCTACGA CGACCTGCAG GACGGACCGT CGCAGGCACG ACGGCCCGTC 99492 || |||||| ||| | ||| |||||||||| |||||||||| |||||||||| |||| || || TGAGTCTCTG AACCTTGCGA CGACCTGCAG GACGGACCGT CGCAGGCACG ACGGGCCATC 452 AAAGGTTGCG CAAATCCCAG GCAGAGTCGG ATTTCTGGTT AAGTTTTAAG GGACGTTTTT 99552 | |||||||| |||||||| | | ||||| |||||| | |||||||| ||||||||| ACAGGTTGCG -TAATCCCAG TCTGGGTCGG ATTTCTTTAC ACGTTTTAAG GGACGTTTTG 511 GACTATTCTT GCCTTAATTA TAAAGTTCGT GGGTTTATAT TAATAACTCA AATTCTGGAG 99612 |||||||| | | ||||||| ||||||| || |||||||| | |||||| || |||| | GACTATTCCT ACTTTAATTA TAAAGTTAGT GGGTTTATGT TAATAAGTCT AATTACCTGG 571 GGGTTAAAAG AGGTAACCCT AAGTTAATTA GTGGGGTATT ATTGCCATCT TTTATTCTTA 99672 |||||||||| |||||||| | ||| ||||| ||||| |||| ||| |||||| |||||||||| GGGTTAAAAG AGGTAACCTT GAGTAAATTA GTGGGTTATT ATT-CCATCT TTTATTCTTA 630 ATTATATACT AATTAGGGTA AAAGAAAGAG GGTTGGAATA A-AGAAA-AT AGAAAGAACA 99730 ||||||| || |||||||||| |||||| ||| |||| ||||| | | ||| | | || | | ATTATATGCT AATTAGGGTA AAAGAAGGAG GGTTTGAATA AGAAAAAGAA AAGAACAGAA 690 AGAGAGAGAG GGAGAATCGA 99750 ||||||||| |||||||||| AGAGAGAGAA GGAGAATCGA 710 hqPGS_C10HBa0115K16.1+_SGN-E396056- (99213 99750) ******************************************************************************** EST sequence 236 -strand 690 n (File: SGN-E377133-) 1 CTCAATGAAA AATGAGTAAA TTTTTTATAT TTTATGGCAT AATTTTTTCA TTAATTCATG 61 GTTGAGAAAA TCTTTGTTTC TAATAGTGTT ATAAATCGTA AAATAATAAT AATATTTAAG 121 TAGGAAGAAC ATAAATGTAA CGACCTGTTT AGTCGTTTTG AGTAGCAGAT TTTATTTTTG 181 GAAAAACAGG TTGAGACGAC GGAACCCACG ACGGACCGTC ATGAGCACGA TGGACCGTCG 241 AGGAGTCTCG TTTCAAAACA CTTAGAAATT CTGAAATTGG GTACTAAAAA TCGACTCTCT 301 GAACTTCGTA ACGGAATGGC ACGACGGACC GTCACGGGCG TGACGGACCG TCACAGACTC 361 TTTGGTGGAA ATTGAGTCTC TGAACCTTGC GACGACCTGC AGGACGGACC GTCGCAGGCA 421 CGACGGGCCA TCACAGGTTG CGTAATCCCA GTCTGGGTCG GATTTCTTTA CACGTTTTAA 481 GGGACGTTTT GGACTATTCC TACTTTAATT ATAAAGTTAG TGGGTTTATG TTAATAAGTC 541 TAATTACCTG GGGGTTAAAA GAGGTAACCT TGAGTAAATT AGTGGGTTAT TATTCCATCT 601 TTTATTCTTA ATTATATGCT AATTAGGGTA AAAGAAGGAG GGTTTGAATA AGAAAAAGAA 661 AAGAACAGAA AGAGAGAGAA GGAGAATCGA Predicted gene structure (within gDNA segment 97156 to 100838): Exon 1 99213 99750 ( 538 n); cDNA 134 690 ( 557 n); score: 0.771 MATCH C10HBa0115K16.1+ SGN-E377133- 0.771 538 0.780 C PGS_C10HBa0115K16.1+_SGN-E377133- (99213 99750) Alignment (genomic DNA sequence = upper lines): AATGTAACGA CCCGTTTAGT CGTTTTGAGC GGCAGACTTT ATTTTTGGAA AAACTGGCAG 99272 |||||||||| || ||||||| ||||||||| ||||| ||| |||||||||| |||| || | AATGTAACGA CCTGTTTAGT CGTTTTGAGT AGCAGATTTT ATTTTTGGAA AAACAGGTTG 193 AAGCGACGGA CCCCACGACG GACCATCATG GGCACGACGG ACCGTCGCAG GGTCTCGTTT 99332 | ||||||| ||||||||| |||| ||||| |||||| || ||||||| | ||||||||| AGACGACGGA ACCCACGACG GACCGTCATG AGCACGATGG ACCGTCGAGG AGTCTCGTTT 253 CAAAACACTT AGAAAATCTG AAATTGGGTA CTAAAAATCG ACTCTCTGAA CTTTGTGACG 99392 |||||||||| ||||| |||| |||||||||| |||||||||| |||||||||| ||| || ||| CAAAACACTT AGAAATTCTG AAATTGGGTA CTAAAAATCG ACTCTCTGAA CTTCGTAACG 313 GAATGGCAGG ACGGACCGTC A----C---A --GA-C--C- C-G------T GGTGGAAATT 99432 |||||||| | |||||||||| | | | || | | | | | |||||||| | GAATGGCACG ACGGACCGTC ACGGGCGTGA CGGACCGTCA CAGACTCTTT GGTGGAAA-T 372 TGGGTCTCTA AACTCTACGA CGACCTGCAG GACGGACCGT CGCAGGCACG ACGGCCCGTC 99492 || |||||| ||| | ||| |||||||||| |||||||||| |||||||||| |||| || || TGAGTCTCTG AACCTTGCGA CGACCTGCAG GACGGACCGT CGCAGGCACG ACGGGCCATC 432 AAAGGTTGCG CAAATCCCAG GCAGAGTCGG ATTTCTGGTT AAGTTTTAAG GGACGTTTTT 99552 | |||||||| |||||||| | | ||||| |||||| | |||||||| ||||||||| ACAGGTTGCG -TAATCCCAG TCTGGGTCGG ATTTCTTTAC ACGTTTTAAG GGACGTTTTG 491 GACTATTCTT GCCTTAATTA TAAAGTTCGT GGGTTTATAT TAATAACTCA AATTCTGGAG 99612 |||||||| | | ||||||| ||||||| || |||||||| | |||||| || |||| | GACTATTCCT ACTTTAATTA TAAAGTTAGT GGGTTTATGT TAATAAGTCT AATTACCTGG 551 GGGTTAAAAG AGGTAACCCT AAGTTAATTA GTGGGGTATT ATTGCCATCT TTTATTCTTA 99672 |||||||||| |||||||| | ||| ||||| ||||| |||| ||| |||||| |||||||||| GGGTTAAAAG AGGTAACCTT GAGTAAATTA GTGGGTTATT ATT-CCATCT TTTATTCTTA 610 ATTATATACT AATTAGGGTA AAAGAAAGAG GGTTGGAATA A-AGAAA-AT AGAAAGAACA 99730 ||||||| || |||||||||| |||||| ||| |||| ||||| | | ||| | | || | | ATTATATGCT AATTAGGGTA AAAGAAGGAG GGTTTGAATA AGAAAAAGAA AAGAACAGAA 670 AGAGAGAGAG GGAGAATCGA 99750 ||||||||| |||||||||| AGAGAGAGAA GGAGAATCGA 690 hqPGS_C10HBa0115K16.1+_SGN-E377133- (99213 99750) ******************************************************************************** EST sequence 11 +strand 679 n (File: SGN-E550127+) 1 ATGAGTAATT TTTTATATTT TATGTCATAA TTTTTTCATT AATTCATGGT TGTGCAAATC 61 TTTGTTTCTA ATAGTGTTAT AAATCGTAAA ATAATAATAA TATTTAAGTA GGAAGAACAT 121 AAATGTAACG ACCTGTTTAG TCGTTTTGAG TAGCAGATTT TATTTTTGGA AAAACAGGTT 181 GAGACGACGG AACCCACGAC GGACCGTCAT GAGCACGATG GACCGTCGAG GAGTCTCGTT 241 TCAAAACACT TAGAAATTCT GAAATTGGGT ACTAAAAATC GACTCTCTGA ACTTCGTAAC 301 GGAATGGCAC GACGGACCGT CACGGGCGTG ACGGACCGTC ACAGACTCTT TGGTGGAAAT 361 TGAGTCTCTG AACCTTGCGA CGACCTGCAG GACGGACCGT CGCAGGCACG ACGGGCCATC 421 ACAGGTTGCG TAATCCCAGT CTGGGTCGGA TTTCTTTACA CGTTTTAAGG GACGTTTTGG 481 ACTATTCCTA CTTTAATTAT AAAGTTAGTG GGTTTATGTT AATAAGTCTA ATTACCTGGG 541 GGTTAAAAGA GGTAACCTTG AGTAAATTAG TGGGTTATTA TTCCATCTTT TATTCTTAAT 601 TATATGCTAA TTAGGGTAAA AGAAGGAGGG TTTTGATAAG AAAAAGAAAA GGACAGAAAG 661 AGAGAGAAGG AGAATCGAT Predicted gene structure (within gDNA segment 97286 to 100858): Exon 1 99213 99750 ( 538 n); cDNA 122 678 ( 557 n); score: 0.770 MATCH C10HBa0115K16.1+ SGN-E550127+ 0.770 538 0.792 C PGS_C10HBa0115K16.1+_SGN-E550127+ (99213 99750) Alignment (genomic DNA sequence = upper lines): AATGTAACGA CCCGTTTAGT CGTTTTGAGC GGCAGACTTT ATTTTTGGAA AAACTGGCAG 99272 |||||||||| || ||||||| ||||||||| ||||| ||| |||||||||| |||| || | AATGTAACGA CCTGTTTAGT CGTTTTGAGT AGCAGATTTT ATTTTTGGAA AAACAGGTTG 181 AAGCGACGGA CCCCACGACG GACCATCATG GGCACGACGG ACCGTCGCAG GGTCTCGTTT 99332 | ||||||| ||||||||| |||| ||||| |||||| || ||||||| | ||||||||| AGACGACGGA ACCCACGACG GACCGTCATG AGCACGATGG ACCGTCGAGG AGTCTCGTTT 241 CAAAACACTT AGAAAATCTG AAATTGGGTA CTAAAAATCG ACTCTCTGAA CTTTGTGACG 99392 |||||||||| ||||| |||| |||||||||| |||||||||| |||||||||| ||| || ||| CAAAACACTT AGAAATTCTG AAATTGGGTA CTAAAAATCG ACTCTCTGAA CTTCGTAACG 301 GAATGGCAGG ACGGACCGTC A----C---A --GA-C--C- C-G------T GGTGGAAATT 99432 |||||||| | |||||||||| | | | || | | | | | |||||||| | GAATGGCACG ACGGACCGTC ACGGGCGTGA CGGACCGTCA CAGACTCTTT GGTGGAAA-T 360 TGGGTCTCTA AACTCTACGA CGACCTGCAG GACGGACCGT CGCAGGCACG ACGGCCCGTC 99492 || |||||| ||| | ||| |||||||||| |||||||||| |||||||||| |||| || || TGAGTCTCTG AACCTTGCGA CGACCTGCAG GACGGACCGT CGCAGGCACG ACGGGCCATC 420 AAAGGTTGCG CAAATCCCAG GCAGAGTCGG ATTTCTGGTT AAGTTTTAAG GGACGTTTTT 99552 | |||||||| |||||||| | | ||||| |||||| | |||||||| ||||||||| ACAGGTTGCG -TAATCCCAG TCTGGGTCGG ATTTCTTTAC ACGTTTTAAG GGACGTTTTG 479 GACTATTCTT GCCTTAATTA TAAAGTTCGT GGGTTTATAT TAATAACTCA AATTCTGGAG 99612 |||||||| | | ||||||| ||||||| || |||||||| | |||||| || |||| | GACTATTCCT ACTTTAATTA TAAAGTTAGT GGGTTTATGT TAATAAGTCT AATTACCTGG 539 GGGTTAAAAG AGGTAACCCT AAGTTAATTA GTGGGGTATT ATTGCCATCT TTTATTCTTA 99672 |||||||||| |||||||| | ||| ||||| ||||| |||| ||| |||||| |||||||||| GGGTTAAAAG AGGTAACCTT GAGTAAATTA GTGGGTTATT ATT-CCATCT TTTATTCTTA 598 ATTATATACT AATTAGGGTA AAAGAAAGAG GGTTGGAATA AAGAAAATAG AAAGA-A-CA 99730 ||||||| || |||||||||| |||||| ||| |||| ||| | |||| | || || | | ATTATATGCT AATTAGGGTA AAAGAAGGAG GGTTTTGATA AGAAAAAGAA AAGGACAGAA 658 AGAGAGAGAG GGAGAATCGA 99750 ||||||||| |||||||||| AGAGAGAGAA GGAGAATCGA 678 hqPGS_C10HBa0115K16.1+_SGN-E550127+ (99213 99750) ******************************************************************************** EST sequence 13 +strand 673 n (File: SGN-E550140+) 1 GTAATTTTTT ATATTTTTGG TCTAATTTTT TGTTAATTCA TGGTTGATAA CATCTTTGTT 61 TCTAATAGTG TTATAAATCG TAAAATAATA ATAATATTTA AGTAGGAAGA ACATAAATGT 121 AACGACCTGT TTAGTCGTTT TGAGTAGCAG ATTTTATTTT TGGAAAAACA GGTTGAGACG 181 ACGGAACCCA CGACGGACCG TCATGAGCAC GATGGACCGT CGAGGAGTCT CGTTTCAAAA 241 CACTTAGAAA TTCTGAAATT GGGTACTAAA AATCGACTCT CTGAACTTCG TAACGGAATG 301 GCACGACGGA CCGTCACGGG CGTGACGGAC CGTCACAGAC TCTTTGGTGG AAATTGAGTC 361 TCTGAACCTT GCGACGACCT GCAGGACGGA CCGTCGCAGG CACGACGGGC CATCACAGGT 421 TGCGTAATCC CAGTCTGGGT CGGATTTCTT TACACGTTTT AAGGGACGTT TTGGACTATT 481 CCTACTTTAA TTATAAAGTT AGTGGGTTTA TGTTAATAAG TCTAATTACC TGGGGGTTAA 541 AAGAGGTAAC CTTNGAGTAA TTAGTGGGTT ATTATTCCAT CTTTTATTCT TAATTATATG 601 CTAATTAGGG TAAAAGAAGG AGGGTTTGAA TAAGAAAAAG AAAAGAACAG AAAGAGAGAG 661 AAGGAGAATC GAT Predicted gene structure (within gDNA segment 97346 to 100858): Exon 1 99213 99750 ( 538 n); cDNA 116 672 ( 557 n); score: 0.768 MATCH C10HBa0115K16.1+ SGN-E550140+ 0.768 538 0.799 C PGS_C10HBa0115K16.1+_SGN-E550140+ (99213 99750) Alignment (genomic DNA sequence = upper lines): AATGTAACGA CCCGTTTAGT CGTTTTGAGC GGCAGACTTT ATTTTTGGAA AAACTGGCAG 99272 |||||||||| || ||||||| ||||||||| ||||| ||| |||||||||| |||| || | AATGTAACGA CCTGTTTAGT CGTTTTGAGT AGCAGATTTT ATTTTTGGAA AAACAGGTTG 175 AAGCGACGGA CCCCACGACG GACCATCATG GGCACGACGG ACCGTCGCAG GGTCTCGTTT 99332 | ||||||| ||||||||| |||| ||||| |||||| || ||||||| | ||||||||| AGACGACGGA ACCCACGACG GACCGTCATG AGCACGATGG ACCGTCGAGG AGTCTCGTTT 235 CAAAACACTT AGAAAATCTG AAATTGGGTA CTAAAAATCG ACTCTCTGAA CTTTGTGACG 99392 |||||||||| ||||| |||| |||||||||| |||||||||| |||||||||| ||| || ||| CAAAACACTT AGAAATTCTG AAATTGGGTA CTAAAAATCG ACTCTCTGAA CTTCGTAACG 295 GAATGGCAGG ACGGACCGTC A----C---A --GA-C--C- C-G------T GGTGGAAATT 99432 |||||||| | |||||||||| | | | || | | | | | |||||||| | GAATGGCACG ACGGACCGTC ACGGGCGTGA CGGACCGTCA CAGACTCTTT GGTGGAAA-T 354 TGGGTCTCTA AACTCTACGA CGACCTGCAG GACGGACCGT CGCAGGCACG ACGGCCCGTC 99492 || |||||| ||| | ||| |||||||||| |||||||||| |||||||||| |||| || || TGAGTCTCTG AACCTTGCGA CGACCTGCAG GACGGACCGT CGCAGGCACG ACGGGCCATC 414 AAAGGTTGCG CAAATCCCAG GCAGAGTCGG ATTTCTGGTT AAGTTTTAAG GGACGTTTTT 99552 | |||||||| |||||||| | | ||||| |||||| | |||||||| ||||||||| ACAGGTTGCG -TAATCCCAG TCTGGGTCGG ATTTCTTTAC ACGTTTTAAG GGACGTTTTG 473 GACTATTCTT GCCTTAATTA TAAAGTTCGT GGGTTTATAT TAATAACTCA AATTCTGGAG 99612 |||||||| | | ||||||| ||||||| || |||||||| | |||||| || |||| | GACTATTCCT ACTTTAATTA TAAAGTTAGT GGGTTTATGT TAATAAGTCT AATTACCTGG 533 GGGTTAAAAG AGGTAACCCT AAGTTAATTA GTGGGGTATT ATTGCCATCT TTTATTCTTA 99672 |||||||||| |||||||| | |||||| ||||| |||| ||| |||||| |||||||||| GGGTTAAAAG AGGTAACCTT NGAGTAATTA GTGGGTTATT ATT-CCATCT TTTATTCTTA 592 ATTATATACT AATTAGGGTA AAAGAAAGAG GGTTGGAATA A-AGAAA-AT AGAAAGAACA 99730 ||||||| || |||||||||| |||||| ||| |||| ||||| | | ||| | | || | | ATTATATGCT AATTAGGGTA AAAGAAGGAG GGTTTGAATA AGAAAAAGAA AAGAACAGAA 652 AGAGAGAGAG GGAGAATCGA 99750 ||||||||| |||||||||| AGAGAGAGAA GGAGAATCGA 672 hqPGS_C10HBa0115K16.1+_SGN-E550140+ (99213 99750) ******************************************************************************** EST sequence 27 +strand 681 n (File: SGN-E389553+) 1 AATGAGTAAT TTTTTATATT TTATTCCATA ATTTTTTCAT TAATTCATGG TTGAGAAAAT 61 CTTTGTTTCT AATAGTGTTA TAAATCGTAA AATAATAATA ATATTTAAGT AGGAACGAAC 121 ATAAATGTAA CGACCTGTTT AGTCGTTTTG AGTAGCAGAT TTTATTTTTG GAAAAACAGG 181 TTGAGACGAC GGAACCCACG ACGGACCGTC ATGAGCACGA TGGACCGTCG AGGAGTCTCG 241 TTTCAAAACA CTTAGAAATT CTGAAATTGG GTACTAAAAA TCGACTCTCT GAACTTCGTA 301 ACGGAATGGC ACGACGGACC GTCACGGGCG TGACGGACCG TCACAGACTC TTTGGTGGAA 361 ATTGAGTCTC TGAACCTTGC GACGACCTGC AGGACGGACC GTCGCAGGCA CGACGGGCCA 421 TCACAGGTTG CGTAATCCCA GTCTGGGTCG GATTTCTTTA CACGTTTTAA GGGACGTTTT 481 GGACTATTCC TACTTTAATT ATAAAGTTAG TGGGTTTATG TTAATAAGTC TAATTACCTG 541 GGGGTTAAAA GAGGTAACCT TGAGTAAATT AGTGGGTTAT TATTCCATCT TTTATTCTTA 601 ATTATATGCT AATTAGGGTA AAAGAAGGAG GGTTTGAATA AGAAAAAGAA AAGAACAGAA 661 AGAGAGAGAA GGAGAATCGA T Predicted gene structure (within gDNA segment 97266 to 100858): Exon 1 99213 99750 ( 538 n); cDNA 124 680 ( 557 n); score: 0.771 MATCH C10HBa0115K16.1+ SGN-E389553+ 0.771 538 0.790 C PGS_C10HBa0115K16.1+_SGN-E389553+ (99213 99750) Alignment (genomic DNA sequence = upper lines): AATGTAACGA CCCGTTTAGT CGTTTTGAGC GGCAGACTTT ATTTTTGGAA AAACTGGCAG 99272 |||||||||| || ||||||| ||||||||| ||||| ||| |||||||||| |||| || | AATGTAACGA CCTGTTTAGT CGTTTTGAGT AGCAGATTTT ATTTTTGGAA AAACAGGTTG 183 AAGCGACGGA CCCCACGACG GACCATCATG GGCACGACGG ACCGTCGCAG GGTCTCGTTT 99332 | ||||||| ||||||||| |||| ||||| |||||| || ||||||| | ||||||||| AGACGACGGA ACCCACGACG GACCGTCATG AGCACGATGG ACCGTCGAGG AGTCTCGTTT 243 CAAAACACTT AGAAAATCTG AAATTGGGTA CTAAAAATCG ACTCTCTGAA CTTTGTGACG 99392 |||||||||| ||||| |||| |||||||||| |||||||||| |||||||||| ||| || ||| CAAAACACTT AGAAATTCTG AAATTGGGTA CTAAAAATCG ACTCTCTGAA CTTCGTAACG 303 GAATGGCAGG ACGGACCGTC A----C---A --GA-C--C- C-G------T GGTGGAAATT 99432 |||||||| | |||||||||| | | | || | | | | | |||||||| | GAATGGCACG ACGGACCGTC ACGGGCGTGA CGGACCGTCA CAGACTCTTT GGTGGAAA-T 362 TGGGTCTCTA AACTCTACGA CGACCTGCAG GACGGACCGT CGCAGGCACG ACGGCCCGTC 99492 || |||||| ||| | ||| |||||||||| |||||||||| |||||||||| |||| || || TGAGTCTCTG AACCTTGCGA CGACCTGCAG GACGGACCGT CGCAGGCACG ACGGGCCATC 422 AAAGGTTGCG CAAATCCCAG GCAGAGTCGG ATTTCTGGTT AAGTTTTAAG GGACGTTTTT 99552 | |||||||| |||||||| | | ||||| |||||| | |||||||| ||||||||| ACAGGTTGCG -TAATCCCAG TCTGGGTCGG ATTTCTTTAC ACGTTTTAAG GGACGTTTTG 481 GACTATTCTT GCCTTAATTA TAAAGTTCGT GGGTTTATAT TAATAACTCA AATTCTGGAG 99612 |||||||| | | ||||||| ||||||| || |||||||| | |||||| || |||| | GACTATTCCT ACTTTAATTA TAAAGTTAGT GGGTTTATGT TAATAAGTCT AATTACCTGG 541 GGGTTAAAAG AGGTAACCCT AAGTTAATTA GTGGGGTATT ATTGCCATCT TTTATTCTTA 99672 |||||||||| |||||||| | ||| ||||| ||||| |||| ||| |||||| |||||||||| GGGTTAAAAG AGGTAACCTT GAGTAAATTA GTGGGTTATT ATT-CCATCT TTTATTCTTA 600 ATTATATACT AATTAGGGTA AAAGAAAGAG GGTTGGAATA A-AGAAA-AT AGAAAGAACA 99730 ||||||| || |||||||||| |||||| ||| |||| ||||| | | ||| | | || | | ATTATATGCT AATTAGGGTA AAAGAAGGAG GGTTTGAATA AGAAAAAGAA AAGAACAGAA 660 AGAGAGAGAG GGAGAATCGA 99750 ||||||||| |||||||||| AGAGAGAGAA GGAGAATCGA 680 hqPGS_C10HBa0115K16.1+_SGN-E389553+ (99213 99750) ******************************************************************************** EST sequence 216 -strand 618 n (File: SGN-E396054-) 1 TTGTTTCTAA TAGTGTTATA AATCGTAAAA TAATAATAAT ATTTAAGTAG GAAGAACATA 61 AATGTAACGA CCTGTTTAGT CGTTTTGAGT AGCAGATTTT ATTTTTGGAA AAACAGGTTG 121 AGACGACGGA ACCCACGACG GACCGTCATG AGCACGATGG ACCGTCGAGG AGTCTCGTTT 181 CAAAACACTT AGAAATTCTG AAATTGGGTA CTAAAAATCG ACTCTCTGAA CTTCGTAACG 241 GAATGGCACG ACGGACCGTC ACGGGCGTGA CGGACCGTCA CAGACTCTTT GGTGGAAATT 301 GAGTCTCTGA ACCTTGCGAC GACCTGCAGG ACGGACCGTC GCAGGCACGA CGGGCCATCA 361 CAGGTTGCGT AATCCCAGTC TGGGTCGGAT TTCTTTACAC GTTTTAAGGG ACGTTTTGGA 421 CTATTCCTAC TTTAATTATA AAGTTAGTGG GTTTATGTTA ATAAGTCTAA TTACCTGGGG 481 GTTAAAAGAG GTAACCTTGA GTAAATTAGT GGGTTATTAT TCCATCTTTT ATTCTTAATT 541 ATATGCTAAT TAGGGTAAAA GAAGGAGGGT TTGAATAAGA AAAAGAAAAG AACAGAAAGA 601 GAGAGAAGGA GAATCGAT Predicted gene structure (within gDNA segment 97886 to 100848): Exon 1 99213 99750 ( 538 n); cDNA 61 617 ( 557 n); score: 0.771 MATCH C10HBa0115K16.1+ SGN-E396054- 0.771 538 0.871 C PGS_C10HBa0115K16.1+_SGN-E396054- (99213 99750) Alignment (genomic DNA sequence = upper lines): AATGTAACGA CCCGTTTAGT CGTTTTGAGC GGCAGACTTT ATTTTTGGAA AAACTGGCAG 99272 |||||||||| || ||||||| ||||||||| ||||| ||| |||||||||| |||| || | AATGTAACGA CCTGTTTAGT CGTTTTGAGT AGCAGATTTT ATTTTTGGAA AAACAGGTTG 120 AAGCGACGGA CCCCACGACG GACCATCATG GGCACGACGG ACCGTCGCAG GGTCTCGTTT 99332 | ||||||| ||||||||| |||| ||||| |||||| || ||||||| | ||||||||| AGACGACGGA ACCCACGACG GACCGTCATG AGCACGATGG ACCGTCGAGG AGTCTCGTTT 180 CAAAACACTT AGAAAATCTG AAATTGGGTA CTAAAAATCG ACTCTCTGAA CTTTGTGACG 99392 |||||||||| ||||| |||| |||||||||| |||||||||| |||||||||| ||| || ||| CAAAACACTT AGAAATTCTG AAATTGGGTA CTAAAAATCG ACTCTCTGAA CTTCGTAACG 240 GAATGGCAGG ACGGACCGTC A----C---A --GA-C--C- C-G------T GGTGGAAATT 99432 |||||||| | |||||||||| | | | || | | | | | |||||||| | GAATGGCACG ACGGACCGTC ACGGGCGTGA CGGACCGTCA CAGACTCTTT GGTGGAAA-T 299 TGGGTCTCTA AACTCTACGA CGACCTGCAG GACGGACCGT CGCAGGCACG ACGGCCCGTC 99492 || |||||| ||| | ||| |||||||||| |||||||||| |||||||||| |||| || || TGAGTCTCTG AACCTTGCGA CGACCTGCAG GACGGACCGT CGCAGGCACG ACGGGCCATC 359 AAAGGTTGCG CAAATCCCAG GCAGAGTCGG ATTTCTGGTT AAGTTTTAAG GGACGTTTTT 99552 | |||||||| |||||||| | | ||||| |||||| | |||||||| ||||||||| ACAGGTTGCG -TAATCCCAG TCTGGGTCGG ATTTCTTTAC ACGTTTTAAG GGACGTTTTG 418 GACTATTCTT GCCTTAATTA TAAAGTTCGT GGGTTTATAT TAATAACTCA AATTCTGGAG 99612 |||||||| | | ||||||| ||||||| || |||||||| | |||||| || |||| | GACTATTCCT ACTTTAATTA TAAAGTTAGT GGGTTTATGT TAATAAGTCT AATTACCTGG 478 GGGTTAAAAG AGGTAACCCT AAGTTAATTA GTGGGGTATT ATTGCCATCT TTTATTCTTA 99672 |||||||||| |||||||| | ||| ||||| ||||| |||| ||| |||||| |||||||||| GGGTTAAAAG AGGTAACCTT GAGTAAATTA GTGGGTTATT ATT-CCATCT TTTATTCTTA 537 ATTATATACT AATTAGGGTA AAAGAAAGAG GGTTGGAATA A-AGAAA-AT AGAAAGAACA 99730 ||||||| || |||||||||| |||||| ||| |||| ||||| | | ||| | | || | | ATTATATGCT AATTAGGGTA AAAGAAGGAG GGTTTGAATA AGAAAAAGAA AAGAACAGAA 597 AGAGAGAGAG GGAGAATCGA 99750 ||||||||| |||||||||| AGAGAGAGAA GGAGAATCGA 617 hqPGS_C10HBa0115K16.1+_SGN-E396054- (99213 99750) ******************************************************************************** EST sequence 220 -strand 610 n (File: SGN-E396058-) 1 AATAGTGTTA TAAATCGTAA AATAATAATA ATAGTTAACT ATGAAGAACC TAAATGTAAC 61 GACCTGTTTA GTCGTTGTGA GTAGCAGATT TTATTTTTGG AAACACAGGT TGAGACGACG 121 GAACCCACGA CGGACCGTCA TGAGCACGAT GGACCGTCGA GGAGTCTCGT TTCAAAACAC 181 TTAGAAATTC TGAAATTGGG TACTAAAAAT CGACTCTCTG AACTTCGTAA CGGAATGGCA 241 CGACGGACCG TCACGGGCGT GACGGACCGT CACAGACTCT TTGGTGGAAA TTGAGTCTCT 301 GAACCTTGCG ACGACCTGCA GGACGGACCG TCGCAGGCAC GACGGGCCAT CACAGGTTGC 361 GTAATCCCAG TCTGGGTCGG ATTTCTTTAC ACGTTTTAAG GGACGTTTTG GACTATTCCT 421 ACTTTAATTA TAAAGTTAGT GGGTTTATGT TAATAAGTCT AATTACCTGG GGGTTAAAAG 481 AGGTAACCTT GAGTAAATTA GTGGGTTATT ATTCCATCTT TTATTCTTAA TTATATGCTA 541 ATTAGGGTAA AAGAAGGAGG GTTTGAATAA GAAAAAGAAA AGAACAGAAA GAGAGAGAAG 601 GAGAATCGAT Predicted gene structure (within gDNA segment 97084 to 100848): Exon 1 99213 99750 ( 538 n); cDNA 53 609 ( 557 n); score: 0.768 MATCH C10HBa0115K16.1+ SGN-E396058- 0.768 538 0.882 C PGS_C10HBa0115K16.1+_SGN-E396058- (99213 99750) Alignment (genomic DNA sequence = upper lines): AATGTAACGA CCCGTTTAGT CGTTTTGAGC GGCAGACTTT ATTTTTGGAA AAACTGGCAG 99272 |||||||||| || ||||||| |||| |||| ||||| ||| |||||||||| | || || | AATGTAACGA CCTGTTTAGT CGTTGTGAGT AGCAGATTTT ATTTTTGGAA ACACAGGTTG 112 AAGCGACGGA CCCCACGACG GACCATCATG GGCACGACGG ACCGTCGCAG GGTCTCGTTT 99332 | ||||||| ||||||||| |||| ||||| |||||| || ||||||| | ||||||||| AGACGACGGA ACCCACGACG GACCGTCATG AGCACGATGG ACCGTCGAGG AGTCTCGTTT 172 CAAAACACTT AGAAAATCTG AAATTGGGTA CTAAAAATCG ACTCTCTGAA CTTTGTGACG 99392 |||||||||| ||||| |||| |||||||||| |||||||||| |||||||||| ||| || ||| CAAAACACTT AGAAATTCTG AAATTGGGTA CTAAAAATCG ACTCTCTGAA CTTCGTAACG 232 GAATGGCAGG ACGGACCGTC A----C---A --GA-C--C- C-G------T GGTGGAAATT 99432 |||||||| | |||||||||| | | | || | | | | | |||||||| | GAATGGCACG ACGGACCGTC ACGGGCGTGA CGGACCGTCA CAGACTCTTT GGTGGAAA-T 291 TGGGTCTCTA AACTCTACGA CGACCTGCAG GACGGACCGT CGCAGGCACG ACGGCCCGTC 99492 || |||||| ||| | ||| |||||||||| |||||||||| |||||||||| |||| || || TGAGTCTCTG AACCTTGCGA CGACCTGCAG GACGGACCGT CGCAGGCACG ACGGGCCATC 351 AAAGGTTGCG CAAATCCCAG GCAGAGTCGG ATTTCTGGTT AAGTTTTAAG GGACGTTTTT 99552 | |||||||| |||||||| | | ||||| |||||| | |||||||| ||||||||| ACAGGTTGCG -TAATCCCAG TCTGGGTCGG ATTTCTTTAC ACGTTTTAAG GGACGTTTTG 410 GACTATTCTT GCCTTAATTA TAAAGTTCGT GGGTTTATAT TAATAACTCA AATTCTGGAG 99612 |||||||| | | ||||||| ||||||| || |||||||| | |||||| || |||| | GACTATTCCT ACTTTAATTA TAAAGTTAGT GGGTTTATGT TAATAAGTCT AATTACCTGG 470 GGGTTAAAAG AGGTAACCCT AAGTTAATTA GTGGGGTATT ATTGCCATCT TTTATTCTTA 99672 |||||||||| |||||||| | ||| ||||| ||||| |||| ||| |||||| |||||||||| GGGTTAAAAG AGGTAACCTT GAGTAAATTA GTGGGTTATT ATT-CCATCT TTTATTCTTA 529 ATTATATACT AATTAGGGTA AAAGAAAGAG GGTTGGAATA A-AGAAA-AT AGAAAGAACA 99730 ||||||| || |||||||||| |||||| ||| |||| ||||| | | ||| | | || | | ATTATATGCT AATTAGGGTA AAAGAAGGAG GGTTTGAATA AGAAAAAGAA AAGAACAGAA 589 AGAGAGAGAG GGAGAATCGA 99750 ||||||||| |||||||||| AGAGAGAGAA GGAGAATCGA 609 hqPGS_C10HBa0115K16.1+_SGN-E396058- (99213 99750) ******************************************************************************** EST sequence 58 +strand 674 n (File: SGN-E396057+) 1 TTTTTTTTTT ATGAATTAGC TCAATGAAAA ATGAGTAAAT TTTTTATATT TTATGGCATA 61 ATTTTTTCAT TAATTCATGG TTGAGAAAAT CTTTGTTTCT AATAGTGTTA TAAATCGTAA 121 AATAATAATA ATATTTAAGT AGGAAGAACA TAAATGTAAC GACCTGTTTA GTCGTTTTGA 181 GTAGCAGATT TTATTTTTGG AAAAACAGGT TGAGACGACG GAACCCACGA CGGACCGTCA 241 TGAGCACGAT GGACCGTCGA GGAGTCTCGT TTCAAAACAC TTAAAAATTC TGAAATTGGG 301 TACTAAAAAT CGACTCTCTG AACTTCGTAA CGGAATGGCA CGACGGACCG TCACGGGCGT 361 GACGGACCGT CACAGACTCT TTGGTGGAAA TTGAGTCTCT GAACCTTGCG ACGACCTGCA 421 GGACGGACCG TCGCAGGCAC GACGGGCCAT CACAGGTTGC GTAATCCCAG TCTGGGTCGG 481 ATTTCTTTAC ACGTTTTAAG GGACGTTTTG GACTATTCCT ACTTTAATTA TAAAGTTAGT 541 GGGTTTATGT TAATAAGTCT AATTACCTGG GGGTTAAAAG AGGTAACCTT GAGTAAATTA 601 GTGGGTTATT ATTCCATCTT TTATTCTTAA TTATATGCTA ATTAGGGTAA AAAAAAGAAG 661 GTTTGAATAA AAAA Predicted gene structure (within gDNA segment 96976 to 102386): Exon 1 99213 99717 ( 505 n); cDNA 153 674 ( 522 n); score: 0.776 PPA cDNA 12 1 MATCH C10HBa0115K16.1+ SGN-E396057+ 0.776 505 0.749 C PGS_C10HBa0115K16.1+_SGN-E396057+ (99213 99717) Alignment (genomic DNA sequence = upper lines): AATGTAACGA CCCGTTTAGT CGTTTTGAGC GGCAGACTTT ATTTTTGGAA AAACTGGCAG 99272 |||||||||| || ||||||| ||||||||| ||||| ||| |||||||||| |||| || | AATGTAACGA CCTGTTTAGT CGTTTTGAGT AGCAGATTTT ATTTTTGGAA AAACAGGTTG 212 AAGCGACGGA CCCCACGACG GACCATCATG GGCACGACGG ACCGTCGCAG GGTCTCGTTT 99332 | ||||||| ||||||||| |||| ||||| |||||| || ||||||| | ||||||||| AGACGACGGA ACCCACGACG GACCGTCATG AGCACGATGG ACCGTCGAGG AGTCTCGTTT 272 CAAAACACTT AGAAAATCTG AAATTGGGTA CTAAAAATCG ACTCTCTGAA CTTTGTGACG 99392 |||||||||| | ||| |||| |||||||||| |||||||||| |||||||||| ||| || ||| CAAAACACTT AAAAATTCTG AAATTGGGTA CTAAAAATCG ACTCTCTGAA CTTCGTAACG 332 GAATGGCAGG ACGGACCGTC A----C---A --GA-C--C- C-G------T GGTGGAAATT 99432 |||||||| | |||||||||| | | | || | | | | | |||||||| | GAATGGCACG ACGGACCGTC ACGGGCGTGA CGGACCGTCA CAGACTCTTT GGTGGAAA-T 391 TGGGTCTCTA AACTCTACGA CGACCTGCAG GACGGACCGT CGCAGGCACG ACGGCCCGTC 99492 || |||||| ||| | ||| |||||||||| |||||||||| |||||||||| |||| || || TGAGTCTCTG AACCTTGCGA CGACCTGCAG GACGGACCGT CGCAGGCACG ACGGGCCATC 451 AAAGGTTGCG CAAATCCCAG GCAGAGTCGG ATTTCTGGTT AAGTTTTAAG GGACGTTTTT 99552 | |||||||| |||||||| | | ||||| |||||| | |||||||| ||||||||| ACAGGTTGCG -TAATCCCAG TCTGGGTCGG ATTTCTTTAC ACGTTTTAAG GGACGTTTTG 510 GACTATTCTT GCCTTAATTA TAAAGTTCGT GGGTTTATAT TAATAACTCA AATTCTGGAG 99612 |||||||| | | ||||||| ||||||| || |||||||| | |||||| || |||| | GACTATTCCT ACTTTAATTA TAAAGTTAGT GGGTTTATGT TAATAAGTCT AATTACCTGG 570 GGGTTAAAAG AGGTAACCCT AAGTTAATTA GTGGGGTATT ATTGCCATCT TTTATTCTTA 99672 |||||||||| |||||||| | ||| ||||| ||||| |||| ||| |||||| |||||||||| GGGTTAAAAG AGGTAACCTT GAGTAAATTA GTGGGTTATT ATT-CCATCT TTTATTCTTA 629 ATTATATACT AATTAGGGTA AAAGAAAGAG GGTTGGAATA AAGAA 99717 ||||||| || |||||||||| ||| ||||| |||| ||||| || || ATTATATGCT AATTAGGGTA AAAAAAAGAA GGTTTGAATA AAAAA 674 hqPGS_C10HBa0115K16.1+_SGN-E396057+ (99213 99717) ******************************************************************************** EST sequence 68 +strand 658 n (File: SGN-E377132+) 1 TTTTTTTTTA TGAATTAGCT CAATGAAAAA TGAGTAAATT TTTTATATTT TATGGCATAA 61 TTTTTTCATT AATTCATGGT TGAGAAAATC TTTGTTTCTA ATAGTGTTAT AAATCGTAAA 121 ATAATAATAA TATTTAAGTA GGAAGAACAT AAATGTAACG ACCTGTTTAG TCGTTTTGAG 181 TAGCAGATTT TATTTTTGGA AAAACAGGTT GAGACGACGG AACCCACGAC GGACCGTCAT 241 GAGCACGATG GACCGTCGAG GAGTCTCGTT TCAAAACACT TAGAAATTCT GAAATTGGGT 301 ACTAAAAATC GACTCTCTGA ACTTCGTAAC GGAATGGCAC GACGGACCGT CACGGGCGTG 361 ACGGACCGTC ACAGACTCTT TGGTGGAAAT TGAGTCTCTG AACCTTGCGA CGACCTGCAG 421 GACGGACCGT CGCAGGCACG ACGGGCCATC ACAGGTTGCG TAATCCCAGT CTGGGTCGGA 481 TTTCTTTACA CGTTTTAAGG GACGTTTTGG ACTATTCCTA CTTTAATTAT AAAGTTAGTG 541 GGTTTATGTT AATAAGTCTA ATTACCTGGG GGTTAAAAGA GGTAACCTTG AGTAAATTAG 601 TGGGTTATTA TTCCATCTTT TATTCTTAAA TATATGCTAA TTAGGGTAAA AGAAGGAA Predicted gene structure (within gDNA segment 96986 to 100348): Exon 1 99213 99701 ( 489 n); cDNA 152 657 ( 506 n); score: 0.775 PPA cDNA 11 1 MATCH C10HBa0115K16.1+ SGN-E377132+ 0.775 489 0.743 C PGS_C10HBa0115K16.1+_SGN-E377132+ (99213 99701) Alignment (genomic DNA sequence = upper lines): AATGTAACGA CCCGTTTAGT CGTTTTGAGC GGCAGACTTT ATTTTTGGAA AAACTGGCAG 99272 |||||||||| || ||||||| ||||||||| ||||| ||| |||||||||| |||| || | AATGTAACGA CCTGTTTAGT CGTTTTGAGT AGCAGATTTT ATTTTTGGAA AAACAGGTTG 211 AAGCGACGGA CCCCACGACG GACCATCATG GGCACGACGG ACCGTCGCAG GGTCTCGTTT 99332 | ||||||| ||||||||| |||| ||||| |||||| || ||||||| | ||||||||| AGACGACGGA ACCCACGACG GACCGTCATG AGCACGATGG ACCGTCGAGG AGTCTCGTTT 271 CAAAACACTT AGAAAATCTG AAATTGGGTA CTAAAAATCG ACTCTCTGAA CTTTGTGACG 99392 |||||||||| ||||| |||| |||||||||| |||||||||| |||||||||| ||| || ||| CAAAACACTT AGAAATTCTG AAATTGGGTA CTAAAAATCG ACTCTCTGAA CTTCGTAACG 331 GAATGGCAGG ACGGACCGTC A----C---A --GA-C--C- C-G------T GGTGGAAATT 99432 |||||||| | |||||||||| | | | || | | | | | |||||||| | GAATGGCACG ACGGACCGTC ACGGGCGTGA CGGACCGTCA CAGACTCTTT GGTGGAAA-T 390 TGGGTCTCTA AACTCTACGA CGACCTGCAG GACGGACCGT CGCAGGCACG ACGGCCCGTC 99492 || |||||| ||| | ||| |||||||||| |||||||||| |||||||||| |||| || || TGAGTCTCTG AACCTTGCGA CGACCTGCAG GACGGACCGT CGCAGGCACG ACGGGCCATC 450 AAAGGTTGCG CAAATCCCAG GCAGAGTCGG ATTTCTGGTT AAGTTTTAAG GGACGTTTTT 99552 | |||||||| |||||||| | | ||||| |||||| | |||||||| ||||||||| ACAGGTTGCG -TAATCCCAG TCTGGGTCGG ATTTCTTTAC ACGTTTTAAG GGACGTTTTG 509 GACTATTCTT GCCTTAATTA TAAAGTTCGT GGGTTTATAT TAATAACTCA AATTCTGGAG 99612 |||||||| | | ||||||| ||||||| || |||||||| | |||||| || |||| | GACTATTCCT ACTTTAATTA TAAAGTTAGT GGGTTTATGT TAATAAGTCT AATTACCTGG 569 GGGTTAAAAG AGGTAACCCT AAGTTAATTA GTGGGGTATT ATTGCCATCT TTTATTCTTA 99672 |||||||||| |||||||| | ||| ||||| ||||| |||| ||| |||||| |||||||||| GGGTTAAAAG AGGTAACCTT GAGTAAATTA GTGGGTTATT ATT-CCATCT TTTATTCTTA 628 ATTATATACT AATTAGGGTA AAAGAAAGA 99701 | ||||| || |||||||||| |||||| || AATATATGCT AATTAGGGTA AAAGAAGGA 657 hqPGS_C10HBa0115K16.1+_SGN-E377132+ (99213 99701) ******************************************************************************** EST sequence 271 -strand 545 n (File: SGN-E241959-) 1 TGTTTAGTCG TTTTGAGTAG CAGATTTTAT TTTTGGAAAA ACAGGTTGAG ACGACGGAAC 61 CCACGACGGA CCGTCATGAG CACGATGGAC CGTCGAGGAG TCTCGTTTCA AAACACTTAG 121 AAATTCTGAA ATTGGGTACT AAAAATCGAC TCTCTGAACT TCGTAACGGA ATGGCACGAC 181 GGACCGTCAC GGGCGTGACG GACCGTCACA GACTCTTTGG TGGAAATTGA GTCTCTGAAC 241 CTTGCGACGA CCTGCAGGAC GGACCGTCGC AGGCACGACG GGCCATCACA GGTTGCGTAA 301 TCCCAGTCTG GGTCGGATTT CTTTACACGT TTTAAGGGAC GTTTTGGACT ATTCCTACTT 361 TAATTATAAA GTTAGTGGGT TTATGTTAAT AAGTCTAATT ACCTGGGGGT TAAAAGAGGT 421 AACCTTGAGT AAATTAGTGG GTTATTATTC CATCTTTTAT TCTTAATTAT ATGCTAATTA 481 GGGTAAAAGA AGGAGGGTTT GAATAAGAAA AAGAAAAGAA CAGAAAGAGA GAGAAGGAGA 541 ATCGA Predicted gene structure (within gDNA segment 98606 to 100838): Exon 1 99226 99750 ( 525 n); cDNA 2 545 ( 544 n); score: 0.768 MATCH C10HBa0115K16.1+ SGN-E241959- 0.768 525 0.963 C PGS_C10HBa0115K16.1+_SGN-E241959- (99226 99750) Alignment (genomic DNA sequence = upper lines): GTTTAGTCGT TTTGAGCGGC AGACTTTATT TTTGGAAAAA CTGGCAGAAG CGACGGACCC 99285 |||||||||| |||||| || ||| |||||| |||||||||| | || || ||||||| || GTTTAGTCGT TTTGAGTAGC AGATTTTATT TTTGGAAAAA CAGGTTGAGA CGACGGAACC 61 CACGACGGAC CATCATGGGC ACGACGGACC GTCGCAGGGT CTCGTTTCAA AACACTTAGA 99345 |||||||||| | ||||| || |||| ||||| |||| | || |||||||||| |||||||||| CACGACGGAC CGTCATGAGC ACGATGGACC GTCGAGGAGT CTCGTTTCAA AACACTTAGA 121 AAATCTGAAA TTGGGTACTA AAAATCGACT CTCTGAACTT TGTGACGGAA TGGCAGGACG 99405 || ||||||| |||||||||| |||||||||| |||||||||| || |||||| ||||| |||| AATTCTGAAA TTGGGTACTA AAAATCGACT CTCTGAACTT CGTAACGGAA TGGCACGACG 181 GACCGTCA-- --C---A--G A-C--C-C-G ------TGGT GGAAATTTGG GTCTCTAAAC 99445 |||||||| | | | | | | | | |||| ||||| ||| |||||| ||| GACCGTCACG GGCGTGACGG ACCGTCACAG ACTCTTTGGT GGAAA-TTGA GTCTCTGAAC 240 TCTACGACGA CCTGCAGGAC GGACCGTCGC AGGCACGACG GCCCGTCAAA GGTTGCGCAA 99505 | |||||| |||||||||| |||||||||| |||||||||| | || ||| | ||||||| | CTTGCGACGA CCTGCAGGAC GGACCGTCGC AGGCACGACG GGCCATCACA GGTTGCG-TA 299 ATCCCAGGCA GAGTCGGATT TCTGGTTAAG TTTTAAGGGA CGTTTTTGAC TATTCTTGCC 99565 ||||||| | | |||||||| ||| | | |||||||||| |||||| ||| ||||| | | ATCCCAGTCT GGGTCGGATT TCTTTACACG TTTTAAGGGA CGTTTTGGAC TATTCCTACT 359 TTAATTATAA AGTTCGTGGG TTTATATTAA TAACTCAAAT TCTGGAGGGG TTAAAAGAGG 99625 |||||||||| |||| ||||| ||||| |||| ||| || ||| | |||| |||||||||| TTAATTATAA AGTTAGTGGG TTTATGTTAA TAAGTCTAAT TACCTGGGGG TTAAAAGAGG 419 TAACCCTAAG TTAATTAGTG GGGTATTATT GCCATCTTTT ATTCTTAATT ATATACTAAT 99685 ||||| | || | |||||||| || ||||||| ||||||||| |||||||||| |||| ||||| TAACCTTGAG TAAATTAGTG GGTTATTATT -CCATCTTTT ATTCTTAATT ATATGCTAAT 478 TAGGGTAAAA GAAAGAGGGT TGGAATAA-A GAAA-ATAGA AAGAACAAGA GAGAGAGGGA 99743 |||||||||| ||| |||||| | |||||| | ||| | | || | |||| |||||| ||| TAGGGTAAAA GAAGGAGGGT TTGAATAAGA AAAAGAAAAG AACAGAAAGA GAGAGAAGGA 538 GAATCGA 99750 ||||||| GAATCGA 545 hqPGS_C10HBa0115K16.1+_SGN-E241959- (99226 99750) ******************************************************************************** EST sequence 102 +strand 660 n (File: SGN-E349296+) 1 GAAAAACTGG CAGAAATGAC GGACCCCACG ACGGACCATC ATGGGCACGA CGGACCGTCG 61 CAGGGTCTCA TTTCAAAACA CTTAGGAAAT CTGAAATTGG GTACTGAAAA TCGACTCTCT 121 GAACTTCGTA ACGGAATGGC AAGACGGACC GTCACAGGCG TGATGGACCA TCACAGAGTC 181 TTCAGTGAAA ATCCAGTCTC TGAACCTTGC GACGACCTGC AGGACGGACC GTCGCAGGCA 241 CAACGGGCTG TCACAGGCTG CGTAAATCCC AGTCTGAGTC GGAATTCCTC AATTGTTTTA 301 AGGGACGTTT TTGACTATTC CTGCTTTAAT TATAAAGTTA GTGGGTTAAT GTTAATAAGT 361 CTAATTACTT GGGGGTTAAA AGAGGTAACC TTAAGTTAAT TAGTGGGTTA TTATTGCCAT 421 ATTTTATTCT TAATTATATA CTAATTAGGG TAAAAGAAAG AGGGTTTGAA TAAAGAAAAT 481 AGAAAGAACA AGAGAAAGAG AGAGAAAGTC GAACGAGAAA GAGGATCGAA CGAGAGGAAA 541 AAACACAAAG CTTGGGAAAT CACTTGCTTG ATCACGAATC TTCGGTGGAG GTAGGTTATG 601 GTTTCTCTTA CGATATTCGT AGTAAGCTCT TAATAGCGAA TAATATGTAT TGATAATATT Predicted gene structure (within gDNA segment 98507 to 101995): Exon 1 99260 99769 ( 510 n); cDNA 1 530 ( 530 n); score: 0.786 MATCH C10HBa0115K16.1+ SGN-E349296+ 0.786 510 0.773 C PGS_C10HBa0115K16.1+_SGN-E349296+ (99260 99769) Alignment (genomic DNA sequence = upper lines): GAAAAACTGG CAGAAGCGAC GGACCCCACG ACGGACCATC ATGGGCACGA CGGACCGTCG 99319 |||||||||| ||||| ||| |||||||||| |||||||||| |||||||||| |||||||||| GAAAAACTGG CAGAAATGAC GGACCCCACG ACGGACCATC ATGGGCACGA CGGACCGTCG 60 CAGGGTCTCG TTTCAAAACA CTTAGAAAAT CTGAAATTGG GTACTAAAAA TCGACTCTCT 99379 ||||||||| |||||||||| ||||| |||| |||||||||| ||||| |||| |||||||||| CAGGGTCTCA TTTCAAAACA CTTAGGAAAT CTGAAATTGG GTACTGAAAA TCGACTCTCT 120 GAACTTTGTG ACGGAATGGC AGGACGGACC GTCACAGACC CG-TGG---- T-GGA-AAT- 99431 |||||| || |||||||||| | |||||||| ||||||| | | ||| | | | | GAACTTCGTA ACGGAATGGC AAGACGGACC GTCACAGGCG TGATGGACCA TCACAGAGTC 180 TT--G-G--- -----GTCTC TAAACTCTAC GACGACCTGC AGGACGGACC GTCGCAGGCA 99480 || | | ||||| | ||| | | |||||||||| |||||||||| |||||||||| TTCAGTGAAA ATCCAGTCTC TGAACCTTGC GACGACCTGC AGGACGGACC GTCGCAGGCA 240 CGACGGCCCG TCAAAGGTTG CGCAAATCCC AGGCAGAGTC GGATTTCTGG TTAAGTTTTA 99540 | |||| | | ||| ||| || || ||||||| || | ||||| ||| ||| |||||| CAACGGGCTG TCACAGGCTG CGTAAATCCC AGTCTGAGTC GGAATTCCTC AATTGTTTTA 300 AGGGACGTTT TTGACTATTC TTGCCTTAAT TATAAAGTTC GTGGGTTTAT ATTAATAACT 99600 |||||||||| |||||||||| ||| ||||| ||||||||| ||||||| || ||||||| | AGGGACGTTT TTGACTATTC CTGCTTTAAT TATAAAGTTA GTGGGTTAAT GTTAATAAGT 360 CAAATT-CTG GAGGGGTTAA AAGAGGTAAC CCTAAGTTAA TTAGTGGGGT ATTATTGCCA 99659 | |||| || | |||||||| |||||||||| | |||||||| |||||||| | |||||||||| CTAATTACTT G-GGGGTTAA AAGAGGTAAC CTTAAGTTAA TTAGTGGGTT ATTATTGCCA 419 TCTTTTATTC TTAATTATAT ACTAATTAGG GTAAAAGAAA GAGGGTTGGA ATAAAGAAAA 99719 | |||||||| |||||||||| |||||||||| |||||||||| ||||||| || |||||||||| TATTTTATTC TTAATTATAT ACTAATTAGG GTAAAAGAAA GAGGGTTTGA ATAAAGAAAA 479 TAGAAAGAAC AAGAGAGAGA GGGAG-AA-T CGAACGAGAA GGGAGAAACA AA 99769 |||||||||| |||||| ||| | ||| || | |||||||||| ||| | | || TAGAAAGAAC AAGAGAAAGA GAGAGAAAGT CGAACGAGAA -AGAGGATCG AA 530 hqPGS_C10HBa0115K16.1+_SGN-E349296+ (99260 99769) ******************************************************************************** EST sequence 77 +strand 548 n (File: SGN-E356257+) 1 AAAACACTTA GAAAATCTGA AATTGGGTAC TGAAAATCGA CTCTCTGAAC TTCGTGACGG 61 AATGACAGGA CGGACCATCA CAGGCGTGAC GGACCGTCAT AGATTGTTCA GTGGAAATTG 121 ACTCTCTGAC CCTTGCGACG ACCTGCAGGA CGGACCGTCA CAGTCACGAC GGCCCGTCAC 181 AGGTTGCGCA AATCCCAGGC AGAATCGGAT TTCCTTACAC GTTTTAAGGG ACGTTTTTGG 241 ACTATTCTTT CCTTAATTAT AGATTTCGTG GGTTTATATT AATAACTCAA ATTCTTGGGG 301 TTAAAAGAGG TAACCCTAAG TTAATTAGTG GGGTATTATT GCCATCTTTT ATTCTTAATT 361 ATATGTTAAT TTGGGGTAAA AGAAAGAGGG TTTTGAAACG AGACCCTGCG ATGGTCCGTC 421 GTGCCCATGA CGGTCCGTCG TGGGGTCCGT CGCTTCTGCC AGTTTTTCCA GAAATAAAGT 481 CTGCTGCTCA AAACGACTAA ACGGGTCGTT ACATTATTTG ACTCTATCAC TTTAATTTTC 541 TAGTTAAC Predicted gene structure (within gDNA segment 98734 to 101876): Exon 1 99402 99706 ( 305 n); cDNA 88 392 ( 305 n); score: 0.867 MATCH C10HBa0115K16.1+ SGN-E356257+ 0.867 305 0.557 C PGS_C10HBa0115K16.1+_SGN-E356257+ (99402 99706) Alignment (genomic DNA sequence = upper lines): GACGGACCGT CACAGACCCG T-GGTGGAAA TTTGGGTCTC TAAACTCTAC GACGACCTGC 99460 |||||||||| || ||| | ||||||| ||| |||| | | | | | |||||||||| GACGGACCGT CATAGATTGT TCAGTGGAAA -TTGACTCTC TGACCCTTGC GACGACCTGC 146 AGGACGGACC GTCGCAGGCA CGACGGCCCG TCAAAGGTTG CGCAAATCCC AGGCAGAGTC 99520 |||||||||| ||| ||| || |||||||||| ||| |||||| |||||||||| ||||||| || AGGACGGACC GTCACAGTCA CGACGGCCCG TCACAGGTTG CGCAAATCCC AGGCAGAATC 206 GGATTTCTGG TTAAGTTTTA AGGGACGTTT TT-GACTATT CTTGCCTTAA TTATAAAGTT 99579 ||||||| | |||||| |||||||||| || ||||||| ||| |||||| ||||| | || GGATTTCCTT ACACGTTTTA AGGGACGTTT TTGGACTATT CTTTCCTTAA TTATAGATTT 266 CGTGGGTTTA TATTAATAAC TCAAATTCTG GAGGGGTTAA AAGAGGTAAC CCTAAGTTAA 99639 |||||||||| |||||||||| ||||||||| |||||||| |||||||||| |||||||||| CGTGGGTTTA TATTAATAAC TCAAATTCT- -TGGGGTTAA AAGAGGTAAC CCTAAGTTAA 324 TTAGTGGGGT ATTATTGCCA TCTTTTATTC TTAATTATAT ACTAA-TTAG GGTAAAAGAA 99698 |||||||||| |||||||||| |||||||||| |||||||||| ||| || | |||||||||| TTAGTGGGGT ATTATTGCCA TCTTTTATTC TTAATTATAT GTTAATTTGG GGTAAAAGAA 384 AGAGGGTT 99706 |||||||| AGAGGGTT 392 hqPGS_C10HBa0115K16.1+_SGN-E356257+ (99402 99706) ******************************************************************************** EST sequence 3 +strand 774 n (File: SGN-E349977+) 1 GATGTTGTAA ACCTGTCTAT ATGCTTATTG GTATGCTTGC ATGATTATGA TTATGAAATT 61 GTTATGAATT AACAAAGCAT GATGAAGCTA TTGAATCCCA AATCTTGAAA GAACCCTAAT 121 TCACTTGATA TATTATATAA TAAGATTGAT GAGGCCTTAG TATGAGAGAA GGCTTGATAA 181 ATTATATAAT GAGAATGATG ATGCCTTAGT GTAGAAGAAG GCTTGATGAA TTAGGGGATC 241 GGGTGCCACG TTTCGGTACC AGGATAGAAT GAATATGAGG ATCGGAGTGT CACGTTCCGA 301 CACCAGGATA GAATATGAGG ATCGGAGTGT CACGTTCCGA CACCAGGATA GAATATGAGG 361 ATCGGGTGCC ACGTTCCGGT ACCAGGATAG AATGAATATG AGGATCGGAG TGTTACGTTC 421 CGACACCAGG ATAGAATATG AGGATCGGGT GCCACGTTCC GGTACCAGGA TAGAATGAAT 481 ATGAGGATCG GAGTGCCACG TTCCGGCACC AGGATAGAAA TAGAGGAGCG GAGTGTCACG 541 TACCGACACA AGAGGAAGAA AGATAATGAA TCTTGAAAGA TAATGAATAT ACTCAATCTA 601 ATGAACTTAA TTCCCAAATG AGTATGGTAT TGAGGCTTGA GTCCTCATGT GTGAACTTGA 661 CGGTAATTGT TAATGATNAA GAAATTGCTA TTGCTACATG ATGAGTATTG TAGTTGATTT 721 ACATTATTAT TGATATATAT TGTTCCCTAT TTTGAGTTAG CGATGATATC TACT Predicted gene structure (within gDNA segment 94286 to 102604): Exon 1 99989 100169 ( 181 n); cDNA 131 308 ( 178 n); score: 0.671 Intron 1 100170 100200 ( 31 n); Pd: 0.000 (s: 0.58), Pa: 0.000 (s: 0.71) Exon 2 100201 100239 ( 39 n); cDNA 309 348 ( 40 n); score: 0.705 Intron 2 100240 100270 ( 31 n); Pd: 0.000 (s: 0.71), Pa: 0.000 (s: 0.43) Exon 3 100271 100682 ( 412 n); cDNA 349 774 ( 426 n); score: 0.706 MATCH C10HBa0115K16.1+ SGN-E349977+ 0.696 632 0.817 C PGS_C10HBa0115K16.1+_SGN-E349977+ (99989 100169,100201 100239,100271 100682) Alignment (genomic DNA sequence = upper lines): TAATATACAT TATTAATGAT GATGCCTTGG TATAGAAGAA GGCTTGATGA ATTAAAGTAA 100048 || |||| | || | |||| || ||||| | ||| |||| |||||||| | |||| | ||| TATTATATAA TAAGATTGAT GAGGCCTTAG TATGAGAGAA GGCTTGATAA ATTATA-TAA 189 TGGGATTGAT GATGCCTTGG AATAG-AGAA GGCCTGATGA TTTACAGAAT GATGTAGGGG 100107 || || |||| |||||||| | ||| |||| ||| |||||| ||| | || | || | TGAGAATGAT GATGCCTTAG TGTAGAAGAA GGCTTGATGA ATTAGGGGAT --CG--GGTG 245 ACCGGGTGTC ACGAAC-CGA CACGTAGAAT TAGGGGATCG G-GTGTCACG AACCGACACG 100165 || || || | | || | |||| | |||||| | |||||||| ||||||| -CCACGTTTC GGTACCAGGA TAGAATGAAT ATGAGGATCG GAGTGTCACG TTCCGACACC 304 TAGAATTAGG GGATCGGGTG TCACGAACCG ACACGTAGAA TTAGGGGATC GG-GTGTCAC 100224 || ||||| | | ||||| || ||||||| AGGA...... .......... .......... .....TAGAA TATGAGGATC GGAGTGTCAC 333 GAACTGACAC GTAGAATTAG GGGATCGGGT GTCACAAACC GACACGTAGA ATTAGGGGAT 100284 | | ||||| || |||| || | |||| GTTCCGACAC CAGGA..... .......... .......... ......TAGA ATATGAGGAT 362 CGGGTGTCAC GAACC-G-A- CACG-TAGAA T---TA-GGG GATCGG-GTG TCACGAACCG 100335 |||||| ||| | || | | || | ||||| | || | | |||||| ||| | ||| ||| CGGGTGCCAC GTTCCGGTAC CAGGATAGAA TGAATATGAG GATCGGAGTG TTACGTTCCG 422 ACAC---G-T AGAATTAGGG GATCGGGTGT CACGAACC-G -A-CACG-TA G-AT--ATA- 100383 |||| | | ||||| | | ||||||||| |||| || | | || | || | || ||| ACACCAGGAT AGAATATGAG GATCGGGTGC CACGTTCCGG TACCAGGATA GAATGAATAT 482 GGGGATCGGA GTGTCACGTA CCGACACAAG AGGAATAATG AATATGAGGG ATCGGAGTGT 100443 | |||||||| ||| ||||| ||| ||| || | || | |||| || || | |||||||| GAGGATCGGA GTGCCACGTT CCGGCACCAG --G-AT-AGA AATA-GA-GG AGCGGAGTGT 536 CACGTACCGA CACAAGAGAA TTAAAGATAA TGAATCTTGA AAGAT-GTTA ATATACTCAA 100502 |||||||||| |||||||| | |||||||| |||||||||| ||||| | | |||||||||| CACGTACCGA CACAAGAGGA AGAAAGATAA TGAATCTTGA AAGATAATGA ATATACTCAA 596 TCTAACGAAC ATAATTCCCA AATGAGTATG GTGTTGAGGC TTGAGCCCTC ATGGATGAAC 100562 ||||| |||| ||||||||| |||||||||| || ||||||| ||||| |||| ||| ||||| TCTAATGAAC TTAATTCCCA AATGAGTATG GTATTGAGGC TTGAGTCCTC ATGTGTGAAC 656 TTGATGGTAC TTATTGATGA TTATAATACT TGTTGTGGCT ACATGTTGAA TTTTATAGTT 100622 |||| |||| || || |||| | | | | | || | | ||| ||||| ||| | || ||||| TTGACGGTAA TTGTTAATGA TNA-AGAAAT TGCTATTGCT ACATGATGAG TATTGTAGTT 715 GATTTATGAT AATATTGATA TATATTGTCC CCTATTTTGA GTTGGCCGAT GATATCTACT 100682 |||||| | | |||||||| |||||||| | |||||||||| ||| | |||| |||||||||| GATTTACATT ATTATTGATA TATATTGTTC CCTATTTTGA GTTAG-CGAT GATATCTACT 774 hqPGS_C10HBa0115K16.1+_SGN-E349977+ (100201 100239,100271 100682) ******************************************************************************** EST sequence 5 +strand 731 n (File: SGN-E578076+) 1 TTTCTCGGCC AAACGCGTCA TTTTTCTGTA GTTTTTCATA CTTCAATTTC CTTTTCATTT 61 CTTGGTTGAC CGACGAAACC CACCAACTCA CCACCTCATT CCGCCGTGGT CAGCTCGCTT 121 ACTAGGGTAT ACTCTACGTC TTCTTTAACT CATATAAGAC TCTATCTTTT GTATCTATAA 181 CTGAAGAACA AATTTGCAGT TCAACTGTTC GACGCTTTGC CCCAATTAAT CACAACGTAA 241 ATTTCTTCTG CTCTTAACCC TTGTTCAATT TCAGTGAATT ATCTATATCT CTGGTAAATT 301 GGAAGTCGGG AAACCGAAAA AAGTTGAAAT TTTTAGGGTT GTTTTGTTCT CTGTTTTGCT 361 CGTTAGGACG TTTGAATAAG AAAAATAGAA AGAACAAAGA GAAAACAGAA AAAGAAAGAG 421 AAACGAAGAG GATAGCAAGG ATTTTGAGAA GATAACTTGT TGATCGCAAT TCTTCGGTGG 481 AGGTAGGTTA TGGTTTCTCT TACGATATTC GTAGTAAACT CTTAATAGAG AATGATATGT 541 ATTGATAATA TTGTAAACCC TGCTATGTGC TTAATTGTAT GCTTGCATGA ATGTAACTAT 601 ATAATTGTGA TTATATAAGC ATGATGAAGT TATTGAATCC CAAATCTTGC AAAATCTTAA 661 TCTCTTTGTT CATAATGAGG CCTTGGTATA AAAGAAGGCG TGATGAACTA AAATAATGGG 721 ATTGATGATG C Predicted gene structure (within gDNA segment 94503 to 102352): Exon 1 98955 98973 ( 19 n); cDNA 354 372 ( 19 n); score: 0.684 Intron 1 98974 99688 ( 715 n); Pd: 0.000 (s: 0), Pa: 0.967 (s: 0.64) Exon 2 99689 100063 ( 375 n); cDNA 373 731 ( 359 n); score: 0.771 MATCH C10HBa0115K16.1+ SGN-E578076+ 0.771 394 0.539 C PGS_C10HBa0115K16.1+_SGN-E578076+ (98955 98973,99689 100063) Alignment (genomic DNA sequence = upper lines): TTTTGCTTGA TGAGAACTTG TCTTATGAGG AGGAGCCTGT TGCTATTTTA GATAGAGAAG 99014 ||||||| | | || || TTTTGCTCGT TAGGACGTT. .......... .......... .......... .......... 372 TTCGCAAGTT GAGGTCAAGA GAGATTGCAT CCATCAAGGT GCAATGGAAG AATCGACCGG 99074 .......... .......... .......... .......... .......... .......... 372 TTGAAGAAGC CACTTGGGAG AAGGAGGCGG ATATGCGAGA AAGATACATA CATCTGTTTA 99134 .......... .......... .......... .......... .......... .......... 372 AAGATTCAGG TACTCCTTTT CGCCCTTGTT TTCCTTCTTT TGATCGTTCG GGGATGAACG 99194 .......... .......... .......... .......... .......... .......... 372 ATGGGTAAAT TGGTATCTAA TGTAACGACC CGTTTAGTCG TTTTGAGCGG CAGACTTTAT 99254 .......... .......... .......... .......... .......... .......... 372 TTTTGGAAAA ACTGGCAGAA GCGACGGACC CCACGACGGA CCATCATGGG CACGACGGAC 99314 .......... .......... .......... .......... .......... .......... 372 CGTCGCAGGG TCTCGTTTCA AAACACTTAG AAAATCTGAA ATTGGGTACT AAAAATCGAC 99374 .......... .......... .......... .......... .......... .......... 372 TCTCTGAACT TTGTGACGGA ATGGCAGGAC GGACCGTCAC AGACCCGTGG TGGAAATTTG 99434 .......... .......... .......... .......... .......... .......... 372 GGTCTCTAAA CTCTACGACG ACCTGCAGGA CGGACCGTCG CAGGCACGAC GGCCCGTCAA 99494 .......... .......... .......... .......... .......... .......... 372 AGGTTGCGCA AATCCCAGGC AGAGTCGGAT TTCTGGTTAA GTTTTAAGGG ACGTTTTTGA 99554 .......... .......... .......... .......... .......... .......... 372 CTATTCTTGC CTTAATTATA AAGTTCGTGG GTTTATATTA ATAACTCAAA TTCTGGAGGG 99614 .......... .......... .......... .......... .......... .......... 372 GTTAAAAGAG GTAACCCTAA GTTAATTAGT GGGGTATTAT TGCCATCTTT TATTCTTAAT 99674 .......... .......... .......... .......... .......... .......... 372 TATATACTAA TTAGGGTAAA AGAAAGAGGG TTGGAATAAA GAAAATAGAA AGAACAAGAG 99734 | | | ||||| | | ||| ||| || || | | |||| || || .......... ....TGAATA AGAAAAATAG AAAGAACAAA GAGAA-A-AC AGAA-AA-AG 414 AGAGAGGGAG AATCGAACGA GAAGGGAGAA ACAAAGCTTG GAGAAAGATT TGCTTGCTTG 99794 | | | ||| || |||| || | | || | | | || ||| ||||| |||| ||| A-A-A--GAG AAACGAA-GA G--GATAGCA AGGAT--TTT GAG-AAGATA -ACTTG-TTG 462 ATCACTAATC TTCGGTGGAG GTAGGTTATG GTTT-TC--A TGCT-TTCAT AGTAAACTCT 99850 ||| | | || |||||||||| |||||||||| |||| || | | | ||| | |||||||||| ATCGCAATTC TTCGGTGGAG GTAGGTTATG GTTTCTCTTA CGATATTCGT AGTAAACTCT 522 TAATAGAGAA TGATATGTAT TGGTAGTATT GTAAACCCTA CTATATGCTT AATTGTATGT 99910 |||||||||| |||||||||| || || |||| ||||||||| |||| ||||| ||||||||| TAATAGAGAA TGATATGTAT TGATAATATT GTAAACCCTG CTATGTGCTT AATTGTATGC 582 TTGCGTGAAT ATGATTATGT GATTGTGATA AGATAAGCAT GATTAAAATA TTGAATCCCA 99970 |||| ||||| | | ||| | |||||||| | |||||||| ||| || || |||||||||| TTGCATGAAT GTAACTATAT AATTGTGATT ATATAAGCAT GATGAAGTTA TTGAATCCCA 642 AATCTTGAAA GGAAACTTTA ATATACATTA TTAATGATGA TGCCTTGGTA TAGAAGAAGG 100030 ||||||| || || | ||| || | | || || || |||| ||||||||| || ||||||| AATCTTGCAA --AATC-TTA ATCT-CTTTG TTCATAATGA GGCCTTGGTA TAAAAGAAGG 698 CTTGATGAAT TAAAGTAATG GGATTGATGA TGC 100063 | ||||||| |||| ||||| |||||||||| ||| CGTGATGAAC TAAAATAATG GGATTGATGA TGC 731 hqPGS_C10HBa0115K16.1+_SGN-E578076+ (99689 100063) ******************************************************************************** EST sequence 104 +strand 717 n (File: SGN-E349726+) 1 TAGTCTTCGG TGGAGGTAGG TTATTGTTTC TCTTACGATA TTCGTAGTAA ACTCTTAATA 61 GAGAATGATA TGTATTGATA ATATTGTAAA CCCTGCTATG TGCTTAATTG TATGCTTGCA 121 TGAATGTAAC TATATAATTG TTATTATATA AGCATGATGA AGTTATTGAA TCCCAAATCT 181 TGTAAAAACC TAATCTCTTT TTAATGATGA TGCCTTGGTA AGGGAGAAGG CTTGATGAAC 241 TAAAGTAATG AGATTGATGA TGCCTTGGTA AGGGAGAAGG CTTGATGAAT TGATAGAATG 301 AGATTAGGGG ATCGGGTGTC ACGAACTGAC ACGTAGAATT AGGGGATCGG GTGTCACAAA 361 CCGACACGTA GATTAAGGGA TCAGGTGTCA CGAACCAACA CATAGATTAG GGGATCGGGT 421 GTCACGAACC GACACGTAGA TTTAGGGGAT CGGGTGTCAC GAACCGACAC GTAGATTTAG 481 GGGATCGGGT GTCACGAACC GACACGTAGA TTTAGGGGAT CAGGTGTCAC GAACCGACAC 541 GTAGATTTAG GGGATCGGAG TGTCACGTTC CGACACGTAG ATTTAGGGGA TCAGAGTATC 601 ACGTACCGAC ACAAGAAGAT TAATGAATAT GANGGAGCGG AATGTCACGT ACCGACACAA 661 GAGAAATAAA GACAATGAAT CTTGAAAGAT GTTATATACT CAATCTAATG AACATAA Predicted gene structure (within gDNA segment 98800 to 101332): Exon 1 99800 100516 ( 717 n); cDNA 1 717 ( 717 n); score: 0.870 MATCH C10HBa0115K16.1+ SGN-E349726+ 0.870 717 1.000 C PGS_C10HBa0115K16.1+_SGN-E349726+ (99800 100516) Alignment (genomic DNA sequence = upper lines): TAATCTTCGG TGGAGGTAGG TTATGGTTT- TC--ATGCT- TTCATAGTAA ACTCTTAATA 99855 || ||||||| |||||||||| |||| |||| || | | | ||| |||||| |||||||||| TAGTCTTCGG TGGAGGTAGG TTATTGTTTC TCTTACGATA TTCGTAGTAA ACTCTTAATA 60 GAGAATGATA TGTATTGGTA GTATTGTAAA CCCTACTATA TGCTTAATTG TATGTTTGCG 99915 |||||||||| ||||||| || ||||||||| |||| |||| |||||||||| |||| |||| GAGAATGATA TGTATTGATA ATATTGTAAA CCCTGCTATG TGCTTAATTG TATGCTTGCA 120 TGAATATGAT TATGTGATTG TGATAAGATA AGCATGATTA AAATATTGAA TCCCAAATCT 99975 ||||| | | ||| | |||| | || | ||| |||||||| | | ||||||| |||||||||| TGAATGTAAC TATATAATTG TTATTATATA AGCATGATGA AGTTATTGAA TCCCAAATCT 180 TGAAAGGAAA CTTTAATATA CATTATTAAT GATGATGCCT TGGTATAGAA GAAGGCTTGA 100035 || || ||| | |||| | | || ||||| |||||||||| ||||| | | |||||||||| TGTAA--AAA C-CTAATCT- C-TTTTTAAT GATGATGCCT TGGTAAGGGA GAAGGCTTGA 235 TGAATTAAAG TAATGGGATT GATGATGCCT TGG-AATAGA GAAGGCCTGA TG-ATTTACA 100093 |||| ||||| ||||| |||| |||||||||| ||| || || |||||| ||| || ||| | | TGAACTAAAG TAATGAGATT GATGATGCCT TGGTAAGGGA GAAGGCTTGA TGAATTGATA 295 GAATGA-TGT AGGGGACCGG GTGTCACGAA CCGACACGTA GAATTAGGGG ATCGGGTGTC 100152 |||||| | |||||| ||| |||||||||| | |||||||| |||||||||| |||||||||| GAATGAGATT AGGGGATCGG GTGTCACGAA CTGACACGTA GAATTAGGGG ATCGGGTGTC 355 ACGAACCGAC ACGTAGAATT AGGGGATCGG GTGTCACGAA CCGACACGTA GAATTAGGGG 100212 || ||||||| |||||| ||| | |||||| | |||||||||| || |||| || | |||||||| ACAAACCGAC ACGTAG-ATT AAGGGATCAG GTGTCACGAA CCAACACATA G-ATTAGGGG 413 ATCGGGTGTC ACGAACTGAC ACGTAGAATT AGGGGATCGG GTGTCACAAA CCGACACGTA 100272 |||||||||| |||||| ||| ||||||| || |||||||||| ||||||| || |||||||||| ATCGGGTGTC ACGAACCGAC ACGTAGATTT AGGGGATCGG GTGTCACGAA CCGACACGTA 473 GAATTAGGGG ATCGGGTGTC ACGAACCGAC ACGTAGAATT AGGGGATCGG GTGTCACGAA 100332 || ||||||| |||||||||| |||||||||| ||||||| || |||||||| | |||||||||| GATTTAGGGG ATCGGGTGTC ACGAACCGAC ACGTAGATTT AGGGGATCAG GTGTCACGAA 533 CCGACACGTA GAATTAGGGG ATCGG-GTGT CACGAACCGA CACGTAGATA TAGGGGATCG 100391 |||||||||| || ||||||| ||||| |||| |||| |||| ||||||||| ||||||||| CCGACACGTA GATTTAGGGG ATCGGAGTGT CACGTTCCGA CACGTAGATT TAGGGGATCA 593 GAGTGTCACG TACCGACACA AGAGGAATAA TGAATATGAG GGATCGGAGT GTCACGTACC 100451 |||| ||||| |||||||||| ||| || ||| ||||||||| ||| |||| | |||||||||| GAGTATCACG TACCGACACA AGAAGATTAA TGAATATGAN GGAGCGGAAT GTCACGTACC 653 GACACAAGAG AATTAAAGAT AATGAATCTT GAAAGATGTT AATATACTCA ATCTAACGAA 100511 |||||||||| || |||||| |||||||||| |||||||||| ||||||||| |||||| ||| GACACAAGAG AAATAAAGAC AATGAATCTT GAAAGATGTT -ATATACTCA ATCTAATGAA 712 CATAA 100516 ||||| CATAA 717 hqPGS_C10HBa0115K16.1+_SGN-E349726+ (99800 100516) ******************************************************************************** EST sequence 26 +strand 680 n (File: SGN-E346859+) 1 TTGATATGCC TTGGTATAAA AGAAGGCTTG ATCGATTGAC AGAATAAGAT TAGTGGAGCG 61 GGTGTCATGA ACCGACACGT AGAATTAGGG GATCGGGTAT CACGAACTGA CACGTAGAAC 121 TAGGGGATTG ATATACCGTG GTTTCACGGT ATAATTAATA CTTTTTCCTT AAGTTTAGTG 181 TGTCCGAAAG CCCTTTTTGT GCTAATTTTG ATATAAGTTT TTCTTTGTTT TGCAGGAAAT 241 CTGTCTAAAG CTGAATGCGG AGATTTTGAG CGATAAATGC AGAAGAGACC ACCTACGGAG 301 CTTATGACGG TCCGTCGTGC TTGTGACGGT CCGTAGGTGG CAGCGTAGAG AAGCTGCTGA 361 AGGAAGATGG GGAAGTCTGA CCAAGTGTGG GATTACGAAG CTTGTGACGG TCCGTCATGG 421 ATATGACGGT CCGTCCTGCA GGTTCGTCGC GAAGATCAGA GAAGTGATCC CAGTACCCAA 481 ATTCCAAAAG TTGAAGTATT TTGTAACGAA GACCCTCGAC GGACCGTCGT GCCTGTGACG 541 GTCCGTCACA CTTGCCGTCG AGGGGAATGA AGAAAGCAGC AGAAGAATTG CACCCAAGTA 601 TGGGGCGACG GAGCCCATGA CGGTCCGTCA TGACCACGAC GTTCTGTCGC GTGGTCCGTC 661 GACCCAGCCG CGTTTTGGCA Predicted gene structure (within gDNA segment 98910 to 106474): Exon 1 100054 100179 ( 126 n); cDNA 1 128 ( 128 n); score: 0.829 MATCH C10HBa0115K16.1+ SGN-E346859+ 0.829 126 0.185 C PGS_C10HBa0115K16.1+_SGN-E346859+ (100054 100179) Alignment (genomic DNA sequence = upper lines): TTGATGATGC CTTGGAAT-A GAGAAGGCCT GAT-GATTTA CAGAATGA-T GTAGGGGACC 100110 ||||| |||| ||||| || | ||||||| | ||| |||| | |||||| | ||| ||| | TTGAT-ATGC CTTGGTATAA AAGAAGGCTT GATCGATTGA CAGAATAAGA TTAGTGGAGC 59 GGGTGTCACG AACCGACACG TAGAATTAGG GGATCGGGTG TCACGAACCG ACACGTAGAA 100170 |||||||| | |||||||||| |||||||||| ||||||||| |||||||| | |||||||||| GGGTGTCATG AACCGACACG TAGAATTAGG GGATCGGGTA TCACGAACTG ACACGTAGAA 119 TTAGGGGAT 100179 |||||||| CTAGGGGAT 128 hqPGS_C10HBa0115K16.1+_SGN-E346859+ (100054 100179) ******************************************************************************** EST sequence 251 -strand 337 n (File: SGN-E357033-) 1 GGATAGCGTT CATGAAACTG TCATGTAGAT TTAGGGGATC GGAGTGTCAT GTGTTCACAC 61 AAGAGGATTA ATGAATATGA GGGAGCGGAA TGTCATGTTC CGTCACAAGA GAAATAAAGA 121 TAATGAATCT TGAAAGATGT TAATATACTA AATCTAATGA ACATGATTCC CAAATGAGTA 181 TGGTATTGAG GCTTGAGTCC TCATGTGTGA ACGTGACGGT AATTGTTAAT GATATAGTGC 241 TTGTTGTTGC TACATGTTGA GTATCATAGT TGATTTTATG ATAATNCTTG ATATATATTG 301 ATTTCTATTT TGAGTTGGGC GATGATATCT ATTCAGT Predicted gene structure (within gDNA segment 98715 to 102664): Exon 1 100351 100686 ( 336 n); cDNA 1 337 ( 337 n); score: 0.838 MATCH C10HBa0115K16.1+ SGN-E357033- 0.838 336 0.997 C PGS_C10HBa0115K16.1+_SGN-E357033- (100351 100686) Alignment (genomic DNA sequence = upper lines): GGATCGGGTG TCACGA-ACC GACACGTAGA TATAGGGGAT CGGAGTGTCA CGTACCGACA 100409 |||| | || ||| || || | || ||||| | |||||||| |||||||||| || ||| GGATAGCGT- TCATGAAACT GTCATGTAGA TTTAGGGGAT CGGAGTGTCA TGTGTTCACA 59 CAAGAGGAAT AATGAATATG AGGGATCGGA GTGTCACGTA CCGACACAAG AGAATTAAAG 100469 |||||||| | |||||||||| ||||| |||| ||||| || ||| |||||| |||| ||||| CAAGAGGATT AATGAATATG AGGGAGCGGA ATGTCATGTT CCGTCACAAG AGAAATAAAG 119 ATAATGAATC TTGAAAGATG TTAATATACT CAATCTAACG AACATAATTC CCAAATGAGT 100529 |||||||||| |||||||||| |||||||||| ||||||| | ||||| |||| |||||||||| ATAATGAATC TTGAAAGATG TTAATATACT AAATCTAATG AACATGATTC CCAAATGAGT 179 ATGGTGTTGA GGCTTGAGCC CTCATGGATG AACTTGATGG TACTTATTGA TGATTATAAT 100589 ||||| |||| |||||||| | |||||| || ||| ||| || || || || | ||| |||| | ATGGTATTGA GGCTTGAGTC CTCATGTGTG AACGTGACGG TAATTGTTAA TGA-TATAGT 238 ACTTGTTGTG GCTACATGTT GAATTTTATA GTTGA-TTTA TGATAATA-T TGATATATAT 100647 |||||||| |||||||||| || | | ||| ||||| |||| ||||||| | |||||||||| GCTTGTTGTT GCTACATGTT GAGTATCATA GTTGATTTTA TGATAATNCT TGATATATAT 298 TGTCCCCTAT TTTGAGTTGG CCGATGATAT CTACTGAGT 100686 || |||| |||||||||| ||||||||| ||| | ||| TGATTTCTAT TTTGAGTTGG GCGATGATAT CTATTCAGT 337 hqPGS_C10HBa0115K16.1+_SGN-E357033- (100351 100686) ******************************************************************************** EST sequence 92 +strand 239 n (File: SGN-E391780+) 1 TCACAAACCG ACATATAGAT TTAGGGGATC GGAGTGTCAC GTACCGACAC AAGAGGATTA 61 ATGAATATTG AGGGAGCGGA GTGTCACGTA CCGACACAAG AGAAATAAAG ATAATGAATC 121 TTGAAAGATG TTAATATACT CAATCTAATG AACATGATTC CCAAATGAGT ATGGTATTGA 181 GGCTTGAGTC CTCATGTGTG AACTTGACGG TAATTGTTAA TGATATAGTA TTTGTTGAT Predicted gene structure (within gDNA segment 99076 to 101784): Exon 1 100361 100597 ( 237 n); cDNA 1 237 ( 237 n); score: 0.905 MATCH C10HBa0115K16.1+ SGN-E391780+ 0.905 237 0.992 C PGS_C10HBa0115K16.1+_SGN-E391780+ (100361 100597) Alignment (genomic DNA sequence = upper lines): TCACGAACCG ACACGTAGAT ATAGGGGATC GGAGTGTCAC GTACCGACAC AAGAGGAATA 100420 |||| ||||| ||| ||||| ||||||||| |||||||||| |||||||||| ||||||| || TCACAAACCG ACATATAGAT TTAGGGGATC GGAGTGTCAC GTACCGACAC AAGAGGATTA 60 ATGAATA-TG AGGGATCGGA GTGTCACGTA CCGACACAAG AGAATTAAAG ATAATGAATC 100479 ||||||| || ||||| |||| |||||||||| |||||||||| |||| ||||| |||||||||| ATGAATATTG AGGGAGCGGA GTGTCACGTA CCGACACAAG AGAAATAAAG ATAATGAATC 120 TTGAAAGATG TTAATATACT CAATCTAACG AACATAATTC CCAAATGAGT ATGGTGTTGA 100539 |||||||||| |||||||||| |||||||| | ||||| |||| |||||||||| ||||| |||| TTGAAAGATG TTAATATACT CAATCTAATG AACATGATTC CCAAATGAGT ATGGTATTGA 180 GGCTTGAGCC CTCATGGATG AACTTGATGG TACTTATTGA TGATTATAAT ACTTGTTG 100597 |||||||| | |||||| || ||||||| || || || || | ||| |||| | | |||||| GGCTTGAGTC CTCATGTGTG AACTTGACGG TAATTGTTAA TGA-TATAGT ATTTGTTG 237 hqPGS_C10HBa0115K16.1+_SGN-E391780+ (100361 100597) ******************************************************************************** EST sequence 72 +strand 481 n (File: SGN-E246710+) 1 CACAAACCGA CATATAGATT TAGGGGATCG GAGTGTCACG TACCGACACA AGAGGATTAA 61 TGAATATTGA GGGAGCGGAG TGTCACGTAC CGACACAAGA GAAATAAAGA TAATGAATCT 121 TGAAAGATGT TAATATACTC AATCTAATGA ACATGATTCC CAAATGAGTA TGGTATTGAG 181 GCTTGAGTCC TCATGTGTGA ACTTGACGGT AATTGTTAAT GATATAGTAT TTGTTGTTGC 241 TACATGTTGA GTATCATAGT TGATTTTATG ATATTACTTG GTATATATAT TGATTTCTAT 301 TTTGAGTTGG CCGATGATAT CTACTCAGTA CCCGTGTTTT GTACTGACCC CTACTTTTAT 361 GTTCTCTTCT TGTTTATTTG TGGAGTGCAG CAAACGTGCC ATCGTGTTCA ACTCAACAGT 421 AATTCAAGCC AGTCTTACTA CATCGGAAAT TCAGGGTGAG CTAATGCTTC TAGCTTGGAC 481 T Predicted gene structure (within gDNA segment 99086 to 101448): Exon 1 100362 100838 ( 477 n); cDNA 1 481 ( 481 n); score: 0.907 MATCH C10HBa0115K16.1+ SGN-E246710+ 0.907 477 0.992 C PGS_C10HBa0115K16.1+_SGN-E246710+ (100362 100838) Alignment (genomic DNA sequence = upper lines): CACGAACCGA CACGTAGATA TAGGGGATCG GAGTGTCACG TACCGACACA AGAGGAATAA 100421 ||| |||||| || ||||| |||||||||| |||||||||| |||||||||| |||||| ||| CACAAACCGA CATATAGATT TAGGGGATCG GAGTGTCACG TACCGACACA AGAGGATTAA 60 TGAATA-TGA GGGATCGGAG TGTCACGTAC CGACACAAGA GAATTAAAGA TAATGAATCT 100480 |||||| ||| |||| ||||| |||||||||| |||||||||| ||| |||||| |||||||||| TGAATATTGA GGGAGCGGAG TGTCACGTAC CGACACAAGA GAAATAAAGA TAATGAATCT 120 TGAAAGATGT TAATATACTC AATCTAACGA ACATAATTCC CAAATGAGTA TGGTGTTGAG 100540 |||||||||| |||||||||| ||||||| || |||| ||||| |||||||||| |||| ||||| TGAAAGATGT TAATATACTC AATCTAATGA ACATGATTCC CAAATGAGTA TGGTATTGAG 180 GCTTGAGCCC TCATGGATGA ACTTGATGGT ACTTATTGAT GATTATAATA CTTGTTGTGG 100600 ||||||| || ||||| ||| |||||| ||| | || || || || |||| || ||||||| | GCTTGAGTCC TCATGTGTGA ACTTGACGGT AATTGTTAAT GA-TATAGTA TTTGTTGTTG 239 CTACATGTTG AATTTTATAG TTGA-TTTAT GATAATA-TT -G-ATATATA TTGTCCCCTA 100656 |||||||||| | | | |||| |||| ||||| |||| || || | ||||||| ||| ||| CTACATGTTG AGTATCATAG TTGATTTTAT GATATTACTT GGTATATATA TTGATTTCTA 299 TTTTGAGTTG GCCGATGATA TCTACTGAGT ACCCGTGTTT TGTACTGACC CCTACTTTTA 100716 |||||||||| |||||||||| |||||| ||| |||||||||| |||||||||| |||||||||| TTTTGAGTTG GCCGATGATA TCTACTCAGT ACCCGTGTTT TGTACTGACC CCTACTTTTA 359 TGTTTTCTTC TTGTTTATTT GTGGAGTGCA GCAAACGTGC CATCGTCTTC AACTCAACAG 100776 |||| ||||| |||||||||| |||||||||| |||||||||| |||||| ||| |||||||||| TGTTCTCTTC TTGTTTATTT GTGGAGTGCA GCAAACGTGC CATCGTGTTC AACTCAACAG 419 TAATTCAAGC CAGTCTTACT ACATCGGAAA TTCAGGGTGA GCTAATGCTT CTAGCTTGGA 100836 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAATTCAAGC CAGTCTTACT ACATCGGAAA TTCAGGGTGA GCTAATGCTT CTAGCTTGGA 479 CT 100838 || CT 481 hqPGS_C10HBa0115K16.1+_SGN-E246710+ (100362 100838) ******************************************************************************** EST sequence 266 -strand 730 n (File: SGN-E546506-) 1 GTTCCGGTAC CAGGATAGAA TATGAGGATC GGAGTGTCAC GTTCCGACAC CAGGATAGAA 61 AATGGATCGG GTGCCACGTT CCGGTACCAG GATAGAATGA GGATCGGAGT GCCACGTTCC 121 GGCACCAGGA TAGAAATAGA GGATCGGAGT GTCACGTACC GACACAAGAG GAAGAAAGAT 181 AATGAATCTT GAAAGATAAT GAATATACTC AATCTAATGA ACTTAATTCC CAAATGAGTA 241 TGGTATTGAG GCTTGAGTCC TCATGTGTGA ACTCGGTTGT AGTTATTGAT GAATTCATGG 301 TGTTATTGCT ACATGTTGAG TATTGTAGTT GATTTACATT ATTATTGATA TATACTGTTC 361 CCTATTTTGA GTTGGCCGAT GATATCTACT CAGTACGTGT GGTTGTACTG ACCCCTACTT 421 TCATGTTTTC CTCTTTGTTA TTTGTGTAAT GCAGCAAACG TTCCGTCAAC TTCAACTCAA 481 CAGTAGATCT AGCCAGTCTT CACTTCATCG GAAAATTCAG GGTGAGCTAA TGCGTCTAGC 541 TTGGACTGGG TCTTCTTCTT CAAGTCTTGA TGCCTTGAAT TTCCGGCATG GACTAGCTTT 601 TTAGTTATTT TGTTCTTAGA CATTCCTAGT TAAGTAATTT GAGATAGATG TTCTTGTGAT 661 GATGACTTCC AGATTTTGGG GATAATAATA ATAGTATTGA ATTGTTTTTA TTAAAAAAAA 721 AAAAAAAAAA Predicted gene structure (within gDNA segment 98376 to 104404): Exon 1 100386 100982 ( 597 n); cDNA 101 687 ( 587 n); score: 0.842 PPA cDNA 713 730 MATCH C10HBa0115K16.1+ SGN-E546506- 0.842 597 0.818 C PGS_C10HBa0115K16.1+_SGN-E546506- (100386 100982) Alignment (genomic DNA sequence = upper lines): GGATCGGAGT GTCACGTACC GACACAAGAG GAATAATGAA TATGAGGGAT CGGAGTGTCA 100445 |||||||||| | ||||| || | ||| || | || | || || || |||| |||||||||| GGATCGGAGT GCCACGTTCC GGCAC--CAG G-AT-AGAAA TA-GA-GGAT CGGAGTGTCA 154 CGTACCGACA CAAGAGAATT AAAGATAATG AATCTTGAAA GAT-GTTAAT ATACTCAATC 100504 |||||||||| |||||| | |||||||||| |||||||||| ||| | ||| |||||||||| CGTACCGACA CAAGAGGAAG AAAGATAATG AATCTTGAAA GATAATGAAT ATACTCAATC 214 TAACGAACAT AATTCCCAAA TGAGTATGGT GTTGAGGCTT GAGCCCTCAT GGATGAACTT 100564 ||| |||| | |||||||||| |||||||||| ||||||||| ||| |||||| | |||||| TAATGAACTT AATTCCCAAA TGAGTATGGT ATTGAGGCTT GAGTCCTCAT GTGTGAACTC 274 GATGGTACTT ATTGATGATT ATAATACTTG TTGTGGCTAC ATGTTGAATT TTATAGTTGA 100624 | | ||| || |||||||| | | || || || | ||||| ||||||| | || ||||||| GGTTGTAGTT ATTGATGAAT -TCAT-GGTG TTATTGCTAC ATGTTGAGTA TTGTAGTTGA 332 TTTATGATAA TATTGATATA TATTGTCCCC TATTTTGAGT TGGCCGATGA TATCTACTGA 100684 |||| || |||||||||| || ||| ||| |||||||||| |||||||||| |||||||| | TTTACATTAT TATTGATATA TACTGTTCCC TATTTTGAGT TGGCCGATGA TATCTACTCA 392 GTACCCGTGT TTTGTACTGA CCCCTACTTT TATGTTTTCT TCTTGTTTAT TTGTGGAGTG 100744 |||| ||| ||||||||| |||||||||| |||||||| |||| |||| ||||| | || GTACGTGTG- GTTGTACTGA CCCCTACTTT CATGTTTTCC TCTTTGTTAT TTGTGTAATG 451 CAGCAAACGT GCCATCGTCT TCAACTCAAC AGTAATTCAA GCCAGTCTT- ACTACATCGG 100803 |||||||||| || || || |||||||||| |||| || | ||||||||| ||| |||||| CAGCAAACGT TCCGTCAACT TCAACTCAAC AGTAGATCTA GCCAGTCTTC ACTTCATCGG 511 -AAATTCAGG GTGAGCTAAT GCTTCTAGCT TGGACTGGAT CTCCTTCTTC AAGTCTTGAT 100862 ||||||||| |||||||||| || ||||||| |||||||| | || ||||||| |||||||||| AAAATTCAGG GTGAGCTAAT GCGTCTAGCT TGGACTGGGT CTTCTTCTTC AAGTCTTGAT 571 GCCTTGAACT TCCGGCATGG AGTACCTTCT TATGTATTTT TAGCTTTTAG AATACTCTTA 100922 |||||||| | |||||||||| | || ||| | || || | || | | | |||| | | || || GCCTTGAATT TCCGGCATGG ACTAGCTTTT TA-GT-TATT TTGTTCTTAG -ACATTCCTA 628 GTTTAGTCAT TTGATCGTAG ATGTTCTTGT GATGATGACT TCCAGGTTTT GGGAATAATA 100982 ||| ||| || |||| ||| |||||||||| |||||||||| ||||| |||| ||| |||||| GTTAAGTAAT TTGA-GATAG ATGTTCTTGT GATGATGACT TCCAGATTTT GGGGATAATA 687 hqPGS_C10HBa0115K16.1+_SGN-E546506- (100386 100982) ******************************************************************************** EST sequence 106 +strand 236 n (File: SGN-E209683+) 1 TAATGAACTA AATTCCCAAA TGAGTATGAT GAGGAGGTGT GAGTCCTCAT TGATGTGCTT 61 GGTGTTGTAA CCAAGGGTTA TGGTAACTAT AAATGCTGCA TGTTAAGGAT ATTAGTTGAT 121 TTTATGATAT TGCTTAATAC ATACTGTTCC CTATTTTGAG TTGGCCGATG ATATCTACTC 181 AGTACCCGTG GTTTGTACTG ACCCCTACTT TTATGTTTAT CTTCTTGTTA TTTGTG Predicted gene structure (within gDNA segment 98572 to 101511): Exon 1 100505 100739 ( 235 n); cDNA 1 236 ( 236 n); score: 0.768 MATCH C10HBa0115K16.1+ SGN-E209683+ 0.768 235 0.996 C PGS_C10HBa0115K16.1+_SGN-E209683+ (100505 100739) Alignment (genomic DNA sequence = upper lines): TAACGAACAT AATTCCCAAA TGAGTATGGT GTTGAGGCTT GAGCCCTCAT GGATGAACTT 100564 ||| |||| |||||||||| |||||||| | | |||| | ||| |||||| |||| ||| TAATGAACTA AATTCCCAAA TGAGTATGAT GAGGAGGTGT GAGTCCTCAT TGATGTGCTT 60 GATGGTACTT ATTGATGATT ATAATACTTG TTGTGGCTAC ATGTTGAATT TTATAGTTGA 100624 | | || | | | | || || || | | ||| | ||||| | | ||||||| GGT-GTTGTA ACCAAGGGTT ATGGTAACTA TAAATGCTGC ATGTTAAGGA TATTAGTTGA 119 -TTTATGATA AT-ATTGATA TATATTGTCC CCTATTTTGA GTTGGCCGAT GATATCTACT 100682 ||||||||| | || ||| ||| ||| | |||||||||| |||||||||| |||||||||| TTTTATGATA TTGCTTAATA CATACTGTTC CCTATTTTGA GTTGGCCGAT GATATCTACT 179 GAGTACCCGT GTTTTGTACT GACCCCTACT TTTATGTTT- TCTTCTTGTT TATTTGTG 100739 ||||||||| | |||||||| |||||||||| ||||||||| |||||||| | |||||||| CAGTACCCGT GGTTTGTACT GACCCCTACT TTTATGTTTA TCTTCTTG-T TATTTGTG 236 hqPGS_C10HBa0115K16.1+_SGN-E209683+ (100505 100739) ******************************************************************************** EST sequence 47 +strand 729 n (File: SGN-E351546+) 1 TTGGCCGATG ATATCTACTC AGTAGCCGTG TTTTGTACTG ACCCCTACTT TTATGTTTTT 61 CTTCTTGGTA TTTGTGGAGT GCAGCAAACG TGCCGTCATC TTCGACTCAA CAGTAACTCA 121 AGCCAGTCTT CGTCACACCG GATCTTCAGG GTGAGCTAAC GCTTCTAGCT TGGACTGGAT 181 CTTCTCCTTC ATGTCTTGAT GCCTTGAACT TCCGGCATGG ACTAGCTTCT TATGTAATTT 241 TTTAGCTTCT TAGAAACTCT TAGAATTAGT AGTTTAAAGT AGATGTTCTT GTGATGATGA 301 CTTCCAGGTT TTGGGAATAA TAGATGTTTA ATAATAGTAG TTATTGATTT TATTAATGAG 361 TTTAAGTCTT CCGCATTACT TTCTGTTGCT ATTACATTGA AATGTTAAGG TTTAGATTGG 421 TTGGTTCGCT CACATAGGAG GGTAAGTGTG GGTGCCAGTG GCGGCCCGGA TTTGGGTCGT 481 GACAAAACTT GGTATCAGAG CATTAGGTTC GTTGGTCTCA TCACACAAGA ACAAGTCTAG 541 TAGAGTCTTA AGGAACGGTA GGGGGACGCT TTTACTTTTC CTTGAGAGGC TATAAGACTT 601 TAGGAAAACT TCACTCTTTC ATTCTTTCTT TCGTGCTACT ACTTCGAGTC AATTGGTATC 661 TAAGCGATAC GAATTGGTAT CTGACCATNC TCACTCTCTT GCCAGATGGG TAGAACTAGA 721 GCAACGACT Predicted gene structure (within gDNA segment 100064 to 104434): Exon 1 100664 101160 ( 497 n); cDNA 1 495 ( 495 n); score: 0.865 MATCH C10HBa0115K16.1+ SGN-E351546+ 0.865 497 0.682 C PGS_C10HBa0115K16.1+_SGN-E351546+ (100664 101160) Alignment (genomic DNA sequence = upper lines): TTGGCCGATG ATATCTACTG AGTACCCGTG TTTTGTACTG ACCCCTACTT TTATG-TTTT 100722 |||||||||| ||||||||| |||| ||||| |||||||||| |||||||||| ||||| |||| TTGGCCGATG ATATCTACTC AGTAGCCGTG TTTTGTACTG ACCCCTACTT TTATGTTTTT 60 CTTCTTGTTT ATTTGTGGAG TGCAGCAAAC GTGCCATCGT CTTCAACTCA ACAGTAATTC 100782 ||||||| | |||||||||| |||||||||| ||||| || | |||| ||||| ||||||| || CTTCTTG-GT ATTTGTGGAG TGCAGCAAAC GTGCCGTCAT CTTCGACTCA ACAGTAACTC 119 AAGCCAGTCT TACT-ACATC GGAAATTCAG GGTGAGCTAA TGCTTCTAGC TTGGACTGGA 100841 |||||||||| | | ||| | ||| ||||| |||||||||| ||||||||| |||||||||| AAGCCAGTCT TCGTCACACC GGATCTTCAG GGTGAGCTAA CGCTTCTAGC TTGGACTGGA 179 TCTCCTTCTT CAAGTCTTGA TGCCTTGAAC TTCCGGCATG GAGTACCTTC TTATGT-A-T 100899 ||| || ||| || ||||||| |||||||||| |||||||||| || || |||| |||||| | | TCTTCTCCTT CATGTCTTGA TGCCTTGAAC TTCCGGCATG GACTAGCTTC TTATGTAATT 239 TTTTAGCTT- TTAGAATACT CTTAG-TTTA GTCATTTGAT CGTAGATGTT CTTGTGATGA 100957 ||||||||| |||||| ||| ||||| ||| || | || | ||||||||| |||||||||| TTTTAGCTTC TTAGAA-ACT CTTAGAATTA GT-AGTTTAA AGTAGATGTT CTTGTGATGA 297 TGACTTCCAG GTTTTGGGAA TAATAGATGT TTAATATTGA TAGTTATTGA ATTGGTTTTT 101017 |||||||||| |||||||||| |||||||||| |||||| | ||| || | ||| | |||| TGACTTCCAG GTTTTGGGAA TAATAGATGT TTAATA---A TAG-TAGT-T ATT-GATTTT 351 ATTAATGAG- TTAAGTCTTG CGCATTACTT TCTGTTGTTA TTACATAGAA ATGTTAAGGT 101076 ||||||||| ||||||||| |||||||||| ||||||| || |||||| ||| |||||||||| ATTAATGAGT TTAAGTCTTC CGCATTACTT TCTGTTGCTA TTACATTGAA ATGTTAAGGT 411 TTAGATTGGT TGGTTCGCTC ACATAGGAGG GTAAGTGTGG GTGCCAGTCG CAACCCGG-T 101135 |||||||||| |||||||||| |||||||||| |||||||||| |||||||| | | ||||| | TTAGATTGGT TGGTTCGCTC ACATAGGAGG GTAAGTGTGG GTGCCAGTGG CGGCCCGGAT 471 TTGGGTCGTG ACAACCCTTT ACCAT 101160 |||||||||| |||| | || || TTGGGTCGTG ACAAAAC-TT GGTAT 495 hqPGS_C10HBa0115K16.1+_SGN-E351546+ (100664 101160) ******************************************************************************** EST sequence 74 +strand 580 n (File: SGN-E356206+) 1 TTGGCCGATG ATATCTACTC AGTAGCCGTG TTTTGTACTG ACCCCTACTT TTATGTTTTT 61 CTTCTTGTTA TTTGTGGAGT GCAGCAAACG TGCCGTCATC TTCGACTCAA CAGTAACTCA 121 AGCCAGTCTT CGTCACACCG GATCTTCAGG GTGAGCTAAC GCTTCTAGCT TGGACTGGAT 181 CTTCTCCTTC ATGTCTTGAT GCCTTGAACT TCCGGCATGG ACTAGCTTCT TATGTAATTT 241 TTTAGCTTCT TAGAAACTCT TAGAATTAGT AGTTTAAAGT AGATGTTCTT GTGATGATGA 301 CTTCCAGGTT TTGGGAATAA TAGATGTTTA ATAATAGTAG TTATTGATTT TATTAATGAG 361 TTTAAGTCTT CCGCATTACT TTCTGTTGCT ATTACATTGA AATGTTAAGG TTTAGATTGG 421 TTGGTTCGCT CACATAGGAG GGTAAGTGTG GGTGCCAGTG GCGGCCCGGA TTTGGGTCGT 481 GACAAAACTT GGTATCAGAG CATTAGGGTC GTTGGTCTCA TCACACAAGA ACAAGTCTAG 541 TAGAGTCTTA AGGGACGGTA NGGGGACGCT TTTACTTTTC Predicted gene structure (within gDNA segment 100064 to 102944): Exon 1 100664 101160 ( 497 n); cDNA 1 495 ( 495 n); score: 0.867 MATCH C10HBa0115K16.1+ SGN-E356206+ 0.867 497 0.857 C PGS_C10HBa0115K16.1+_SGN-E356206+ (100664 101160) Alignment (genomic DNA sequence = upper lines): TTGGCCGATG ATATCTACTG AGTACCCGTG TTTTGTACTG ACCCCTACTT TTATG-TTTT 100722 |||||||||| ||||||||| |||| ||||| |||||||||| |||||||||| ||||| |||| TTGGCCGATG ATATCTACTC AGTAGCCGTG TTTTGTACTG ACCCCTACTT TTATGTTTTT 60 CTTCTTGTTT ATTTGTGGAG TGCAGCAAAC GTGCCATCGT CTTCAACTCA ACAGTAATTC 100782 ||||||| || |||||||||| |||||||||| ||||| || | |||| ||||| ||||||| || CTTCTTG-TT ATTTGTGGAG TGCAGCAAAC GTGCCGTCAT CTTCGACTCA ACAGTAACTC 119 AAGCCAGTCT TACT-ACATC GGAAATTCAG GGTGAGCTAA TGCTTCTAGC TTGGACTGGA 100841 |||||||||| | | ||| | ||| ||||| |||||||||| ||||||||| |||||||||| AAGCCAGTCT TCGTCACACC GGATCTTCAG GGTGAGCTAA CGCTTCTAGC TTGGACTGGA 179 TCTCCTTCTT CAAGTCTTGA TGCCTTGAAC TTCCGGCATG GAGTACCTTC TTATGT-A-T 100899 ||| || ||| || ||||||| |||||||||| |||||||||| || || |||| |||||| | | TCTTCTCCTT CATGTCTTGA TGCCTTGAAC TTCCGGCATG GACTAGCTTC TTATGTAATT 239 TTTTAGCTT- TTAGAATACT CTTAG-TTTA GTCATTTGAT CGTAGATGTT CTTGTGATGA 100957 ||||||||| |||||| ||| ||||| ||| || | || | ||||||||| |||||||||| TTTTAGCTTC TTAGAA-ACT CTTAGAATTA GT-AGTTTAA AGTAGATGTT CTTGTGATGA 297 TGACTTCCAG GTTTTGGGAA TAATAGATGT TTAATATTGA TAGTTATTGA ATTGGTTTTT 101017 |||||||||| |||||||||| |||||||||| |||||| | ||| || | ||| | |||| TGACTTCCAG GTTTTGGGAA TAATAGATGT TTAATA---A TAG-TAGT-T ATT-GATTTT 351 ATTAATGAG- TTAAGTCTTG CGCATTACTT TCTGTTGTTA TTACATAGAA ATGTTAAGGT 101076 ||||||||| ||||||||| |||||||||| ||||||| || |||||| ||| |||||||||| ATTAATGAGT TTAAGTCTTC CGCATTACTT TCTGTTGCTA TTACATTGAA ATGTTAAGGT 411 TTAGATTGGT TGGTTCGCTC ACATAGGAGG GTAAGTGTGG GTGCCAGTCG CAACCCGG-T 101135 |||||||||| |||||||||| |||||||||| |||||||||| |||||||| | | ||||| | TTAGATTGGT TGGTTCGCTC ACATAGGAGG GTAAGTGTGG GTGCCAGTGG CGGCCCGGAT 471 TTGGGTCGTG ACAACCCTTT ACCAT 101160 |||||||||| |||| | || || TTGGGTCGTG ACAAAAC-TT GGTAT 495 hqPGS_C10HBa0115K16.1+_SGN-E356206+ (100664 101160) ******************************************************************************** EST sequence 83 +strand 655 n (File: SGN-E356696+) 1 TTGGCCGATG ATATCTACTC AGTAGCCGTG TTTTGTACTG ACCCCTACTT TTATGTTTTT 61 CTTCTTGTTA TTTGTGGAGT GCAGCAAACG TGCCGTCATC TTCGACTCAA CAGTAACTCA 121 AGCCAGTCTT CGTCACACCG GATCTTCAGG GTGAGCTAAC GCTTCTAGCT TGGACTGGAT 181 CTTCTCCTTC ATGTCTTGAT GCCTTGAACT TCCGGCATGG ACTAGCTTCT TATGTAATTT 241 TTTAGCTTCT TAGAAACTCT TAGAATTAGT AGTTTAAAGT AGATGTTCTT GTGATGATGA 301 CTTCCAGGTT TTGGGAATAA TAGATGTTTA ATAATAGTAG TTATTGATTT TATTAATGAG 361 TTTAAGTCTT CCGCATTACT TTCTGTTGCT ATTACATTGA AATGTTAAGG TTTAGATTGG 421 TTGGTTCGCT CACATANGAG GGTAAGTGTG GGTGCCAGTG GCGGCCCGGA TTTGGGTCGT 481 GACAAAACTT GGTATCAGAG CATTAGGTTC GTTGGTCTCA TCACACAAGA ACAAGTCTAG 541 TAGAGTCTTA AGGAACGGTA GGGGGACGCT TTTACTTTTC CTTGAGAGGC TATAAGACTT 601 TAGGAAAACT TCACTCTTTC ATTCTTTCTT TCGTGCTACT ACTTGAGTCC AATTG Predicted gene structure (within gDNA segment 100064 to 103694): Exon 1 100664 101160 ( 497 n); cDNA 1 495 ( 495 n); score: 0.865 MATCH C10HBa0115K16.1+ SGN-E356696+ 0.865 497 0.759 C PGS_C10HBa0115K16.1+_SGN-E356696+ (100664 101160) Alignment (genomic DNA sequence = upper lines): TTGGCCGATG ATATCTACTG AGTACCCGTG TTTTGTACTG ACCCCTACTT TTATG-TTTT 100722 |||||||||| ||||||||| |||| ||||| |||||||||| |||||||||| ||||| |||| TTGGCCGATG ATATCTACTC AGTAGCCGTG TTTTGTACTG ACCCCTACTT TTATGTTTTT 60 CTTCTTGTTT ATTTGTGGAG TGCAGCAAAC GTGCCATCGT CTTCAACTCA ACAGTAATTC 100782 ||||||| || |||||||||| |||||||||| ||||| || | |||| ||||| ||||||| || CTTCTTG-TT ATTTGTGGAG TGCAGCAAAC GTGCCGTCAT CTTCGACTCA ACAGTAACTC 119 AAGCCAGTCT TACT-ACATC GGAAATTCAG GGTGAGCTAA TGCTTCTAGC TTGGACTGGA 100841 |||||||||| | | ||| | ||| ||||| |||||||||| ||||||||| |||||||||| AAGCCAGTCT TCGTCACACC GGATCTTCAG GGTGAGCTAA CGCTTCTAGC TTGGACTGGA 179 TCTCCTTCTT CAAGTCTTGA TGCCTTGAAC TTCCGGCATG GAGTACCTTC TTATGT-A-T 100899 ||| || ||| || ||||||| |||||||||| |||||||||| || || |||| |||||| | | TCTTCTCCTT CATGTCTTGA TGCCTTGAAC TTCCGGCATG GACTAGCTTC TTATGTAATT 239 TTTTAGCTT- TTAGAATACT CTTAG-TTTA GTCATTTGAT CGTAGATGTT CTTGTGATGA 100957 ||||||||| |||||| ||| ||||| ||| || | || | ||||||||| |||||||||| TTTTAGCTTC TTAGAA-ACT CTTAGAATTA GT-AGTTTAA AGTAGATGTT CTTGTGATGA 297 TGACTTCCAG GTTTTGGGAA TAATAGATGT TTAATATTGA TAGTTATTGA ATTGGTTTTT 101017 |||||||||| |||||||||| |||||||||| |||||| | ||| || | ||| | |||| TGACTTCCAG GTTTTGGGAA TAATAGATGT TTAATA---A TAG-TAGT-T ATT-GATTTT 351 ATTAATGAG- TTAAGTCTTG CGCATTACTT TCTGTTGTTA TTACATAGAA ATGTTAAGGT 101076 ||||||||| ||||||||| |||||||||| ||||||| || |||||| ||| |||||||||| ATTAATGAGT TTAAGTCTTC CGCATTACTT TCTGTTGCTA TTACATTGAA ATGTTAAGGT 411 TTAGATTGGT TGGTTCGCTC ACATAGGAGG GTAAGTGTGG GTGCCAGTCG CAACCCGG-T 101135 |||||||||| |||||||||| ||||| |||| |||||||||| |||||||| | | ||||| | TTAGATTGGT TGGTTCGCTC ACATANGAGG GTAAGTGTGG GTGCCAGTGG CGGCCCGGAT 471 TTGGGTCGTG ACAACCCTTT ACCAT 101160 |||||||||| |||| | || || TTGGGTCGTG ACAAAAC-TT GGTAT 495 hqPGS_C10HBa0115K16.1+_SGN-E356696+ (100664 101160) ******************************************************************************** EST sequence 121 -strand 434 n (File: SGN-E222578-) 1 AAAAAAAAAA AAAAAAACTC GAGACTAGCA AGCCTCATCA CTGAAACTCC ATCTTGAAGC 61 TGGTAACACT CGAAGCTCTG CAAGCAAGTT TCCATCTCGA AGCCTTGAAG AAAGTCCCCA 121 TCTAGAAAGT TGTGGAGTGC AGCAAACGTG CCGTCATCTT CGACTCAACA GTAACTCAAG 181 CCAGTCTTCG TCACACCGGA TCTTCAGGGT GAGCTAACGC GTCTAGCTTG GACTGGATCT 241 TCTCCTTCAT GTCTTGATGC CTTGAACCTC CGGCATGGAC TAGCTTCTTA TGTATTTTTA 301 GCTTTTAGAA ACTCTTAGAA TTAGTAGTTT AAAGTAGATG TTCTTGTGAT GATGACTTCC 361 AGGTTTTGGG AATAATAGAT GTTGAATATT GATAGTTATT GAATTGGTTT TTATTAAAAA 421 AAAAAAAAAA AAAA Predicted gene structure (within gDNA segment 98006 to 101792): Exon 1 100735 101021 ( 287 n); cDNA 130 416 ( 287 n); score: 0.895 PPA cDNA 417 434 MATCH C10HBa0115K16.1+ SGN-E222578- 0.895 287 0.661 C PGS_C10HBa0115K16.1+_SGN-E222578- (100735 101021) Alignment (genomic DNA sequence = upper lines): TTGTGGAGTG CAGCAAACGT GCCATCGTCT TCAACTCAAC AGTAATTCAA GCCAGTCTTA 100794 |||||||||| |||||||||| ||| || ||| || ||||||| ||||| |||| ||||||||| TTGTGGAGTG CAGCAAACGT GCCGTCATCT TCGACTCAAC AGTAACTCAA GCCAGTCTTC 189 CT-ACATCGG AAATTCAGGG TGAGCTAATG CTTCTAGCTT GGACTGGATC TCCTTCTTCA 100853 | ||| ||| | ||||||| |||||||| | | |||||||| |||||||||| | || ||||| GTCACACCGG ATCTTCAGGG TGAGCTAACG CGTCTAGCTT GGACTGGATC TTCTCCTTCA 249 AGTCTTGATG CCTTGAACTT CCGGCATGGA GTACCTTCTT ATGTATTTTT AGCTTTTAGA 100913 ||||||||| |||||||| | |||||||||| || |||||| |||||||||| |||||||||| TGTCTTGATG CCTTGAACCT CCGGCATGGA CTAGCTTCTT ATGTATTTTT AGCTTTTAGA 309 ATACTCTTAG -TTTAGTCAT TTGATCGTAG ATGTTCTTGT GATGATGACT TCCAGGTTTT 100972 | |||||||| ||||| | || | |||| |||||||||| |||||||||| |||||||||| A-ACTCTTAG AATTAGT-AG TTTAAAGTAG ATGTTCTTGT GATGATGACT TCCAGGTTTT 367 GGGAATAATA GATGTTTAAT ATTGATAGTT ATTGAATTGG TTTTTATTA 101021 |||||||||| |||||| ||| |||||||||| |||||||||| ||||||||| GGGAATAATA GATGTTGAAT ATTGATAGTT ATTGAATTGG TTTTTATTA 416 hqPGS_C10HBa0115K16.1+_SGN-E222578- (100735 101021) ******************************************************************************** EST sequence 256 -strand 710 n (File: SGN-E392027-) 1 CAGCAAACGT GCCATCGTGT TCAACTCAAC AGTAATTCAA GCCAGTCTTA CTACATCGGA 61 AATTCAGGGT GAGCTAATGC TTCTAGCTTG GACTGGATCT TCTTCTTCAA GTCTTGATGC 121 CTTGAACTTC CGGCATGGAC TAGCTTCTTA TGTATTTTTA GCTTTTAGAC TACTCTTAGT 181 TTAGTCATTT GATCGTAGAT GTTCTTGTGG TGATGACTTC CAGATTTTGG GGAATAATAG 241 ATGTTGAATT TTAGAAGTTA ATGAATTGGT CTGTATTTAA TGAGTTTAAG TCTTCCACAT 301 TACTTTCTGT TGATATTATA TTGAAATGTT AAGGTTAGAT TGGTTGGTTC GCTCACATAG 361 GAGGGTAAGT GTGGGTGCCA GTCGCAACCC GGTTTTGGTC GTGACAAACT TGGTATCAGA 421 GCATTAGGTT CGTTGGTCTC ATCACACAAG AACGAGTCTA GTAGAGTCTT AAGGAACGGT 481 AGGGGGATGC CTTTACTTTT CCTTGAGAGG CTATAAGACT TTTGGAAAAT TCCATTCTTT 541 CTTCTTTCGT GCTATTACTT GGGTCCAATT GGTATCTAGG TGATACAAAT TGGTATCTGA 601 CCATCTTCAC TCTATTTCGC AGATGGTTAG AACTAGAGCA ACGACTACGC CAGCATCAAC 661 ACCAGCACCG GCGGGACAGG GTGCGACTGA GCCAGCCACT GGGGCTGTGG Predicted gene structure (within gDNA segment 100135 to 104887): Exon 1 100745 101159 ( 415 n); cDNA 1 418 ( 418 n); score: 0.913 MATCH C10HBa0115K16.1+ SGN-E392027- 0.913 415 0.585 C PGS_C10HBa0115K16.1+_SGN-E392027- (100745 101159) Alignment (genomic DNA sequence = upper lines): CAGCAAACGT GCCATCGTCT TCAACTCAAC AGTAATTCAA GCCAGTCTTA CTACATCGGA 100804 |||||||||| |||||||| | |||||||||| |||||||||| |||||||||| |||||||||| CAGCAAACGT GCCATCGTGT TCAACTCAAC AGTAATTCAA GCCAGTCTTA CTACATCGGA 60 AATTCAGGGT GAGCTAATGC TTCTAGCTTG GACTGGATCT CCTTCTTCAA GTCTTGATGC 100864 |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| |||||||||| AATTCAGGGT GAGCTAATGC TTCTAGCTTG GACTGGATCT TCTTCTTCAA GTCTTGATGC 120 CTTGAACTTC CGGCATGGAG TACCTTCTTA TGTATTTTTA GCTTTTAGAA TACTCTTAGT 100924 |||||||||| ||||||||| || ||||||| |||||||||| ||||||||| |||||||||| CTTGAACTTC CGGCATGGAC TAGCTTCTTA TGTATTTTTA GCTTTTAGAC TACTCTTAGT 180 TTAGTCATTT GATCGTAGAT GTTCTTGTGA TGATGACTTC CAGGTTTT-G GGAATAATAG 100983 |||||||||| |||||||||| ||||||||| |||||||||| ||| |||| | |||||||||| TTAGTCATTT GATCGTAGAT GTTCTTGTGG TGATGACTTC CAGATTTTGG GGAATAATAG 240 ATGTTTAATA TTGATAGTTA TTGAATTGGT TTTTA-TTAA TGAG-TTAAG TCTTGCGCAT 101041 ||||| ||| || ||||| ||||||||| | || |||| |||| ||||| |||| | ||| ATGTTGAATT TTAGAAGTTA ATGAATTGGT CTGTATTTAA TGAGTTTAAG TCTTCCACAT 300 TACTTTCTGT TGTTATTACA TAGAAATGTT AAGGTTTAGA TTGGTTGGTT CGCTCACATA 101101 |||||||||| || ||||| | | |||||||| |||| ||||| |||||||||| |||||||||| TACTTTCTGT TGATATTATA TTGAAATGTT AAGG-TTAGA TTGGTTGGTT CGCTCACATA 359 GGAGGGTAAG TGTGGGTGCC AGTCGCAACC CGGTTTGGGT CGTGACAACC CT-TTACCA 101159 |||||||||| |||||||||| |||||||||| |||||| ||| |||||||| | | || || GGAGGGTAAG TGTGGGTGCC AGTCGCAACC CGGTTTTGGT CGTGACAAAC TTGGTATCA 418 hqPGS_C10HBa0115K16.1+_SGN-E392027- (100745 101159) ******************************************************************************** EST sequence 119 -strand 679 n (File: SGN-E370357-) 1 TTGGAGGTGG TGTTGCCATG GTGGATTGGG GGAAAAATGG AATTGGACTT TGTAGGAGGA 61 GAAATGGGCA TTTACTTACA CAAATGGCCA CTATTTACAA GAAAACACAT CAGAAATTCG 121 AGGAAAATTC TGCATCCGTA GGCAAATTTG AAAAATTTTA CAAATGGCAG AGGTGTAATC 181 AATCAATAAT ATTTGGGTGA CAGCCGAATG ATTAATTGAC ACTCGAATAA AGCAAACGTA 241 CCGTCGTCTT CAACTCAACC GCAACTCTAG CCAGTCTTCA TTATACCGGA TTTCAGTGTG 301 AGCTAACGCT TCTAGCTTGG ACTGGATCTT CTTCTTCATG TCTTGATGCC TTGAAGTTCC 361 GGCATGGACT AGCTTTTTAG TTATTCTAGC TTTCTAGATA CTCTTAGAAT TAGTAATTTG 421 AGGATAGATG TTCTTGTGAT GATGACTTCC AGATTTTGGG GATAATAATA GTTGTTGAGT 481 TTTTAGAAGT TATTTAATTG ATTTTCATTA ATGAGTTTAA GTCTTCCGCA TTATATTCCG 541 TCATTATATT GAAATGTTGG ATTTTGTATT GGTTGGTTCG CTCACATAGG AGGGTAAGTG 601 TGGGTGCCAC TTGCGGCTCG ATTTGGGTCG TGACATTAAA GATTATCGAA TTCATAATAT 661 AATTGTAAGA AAAAAAAAA Predicted gene structure (within gDNA segment 97143 to 102422): Exon 1 100746 101148 ( 403 n); cDNA 231 635 ( 405 n); score: 0.799 PPA cDNA 667 679 MATCH C10HBa0115K16.1+ SGN-E370357- 0.799 403 0.594 C PGS_C10HBa0115K16.1+_SGN-E370357- (100746 101148) Alignment (genomic DNA sequence = upper lines): AGCAAACGTG CCATCGTCTT CAACTCAACA GTAATTCAAG CCAGTCTT-A CTACATCGGA 100804 ||||||||| || ||||||| ||||||||| | || || || |||||||| | || | ||| AGCAAACGTA CCGTCGTCTT CAACTCAACC GCAACTCTAG CCAGTCTTCA TTATACCGG- 289 AATTCAGGGT GAGCTAATGC TTCTAGCTTG GACTGGATCT CCTTCTTCAA GTCTTGATGC 100864 | ||||| || ||||||| || |||||||||| |||||||||| |||||||| |||||||||| ATTTCAGTGT GAGCTAACGC TTCTAGCTTG GACTGGATCT TCTTCTTCAT GTCTTGATGC 349 CTTGAACTTC CGGCATGGAG TACCTTCTTA TGTATTTTTA GCTTT-TAGA ATACTCTTAG 100923 |||||| ||| ||||||||| || ||| ||| || || || ||||| ||| |||||||||| CTTGAAGTTC CGGCATGGAC TAGCTTTTTA -GTTATTCTA GCTTTCTAG- ATACTCTTAG 407 -TTTAGTCAT TTGATCGTAG ATGTTCTTGT GATGATGACT TCCAGGTTTT -GGG--AATA 100979 ||||| || |||| ||| |||||||||| |||||||||| ||||| |||| ||| |||| AATTAGTAAT TTGAGGATAG ATGTTCTTGT GATGATGACT TCCAGATTTT GGGGATAATA 467 ATAGATGTTT AATATTGA-T AGTTATTGAA TTGGTTTTTA TTAATGAG-T TAAGTCTTGC 101037 |||| |||| | | || | ||||||| || ||| |||| | |||||||| | |||||||| | ATAGTTGTTG AGTTTTTAGA AGTTATTTAA TTGATTTTCA TTAATGAGTT TAAGTCTTCC 527 GCATTACTTT CTGTTGTTAT TACATAGAAA TGTTAAGGTT TAGATTGGTT GGTTCGCTCA 101097 |||||| | | | || || || || |||| |||| || | ||||||| |||||||||| GCATTA-TAT -T-CCGTCAT TATATTGAAA TGTTGGATTT TGTATTGGTT GGTTCGCTCA 584 CATAGGAGGG TAAGTGTGGG TGCCAGTCGC AACCCGGTTT GGGTCGTGAC A 101148 |||||||||| |||||||||| ||||| | || | || ||| |||||||||| | CATAGGAGGG TAAGTGTGGG TGCCACTTGC GGCTCGATTT GGGTCGTGAC A 635 hqPGS_C10HBa0115K16.1+_SGN-E370357- (100746 101148) ******************************************************************************** EST sequence 269 -strand 265 n (File: SGN-E216150-) 1 AGTAACTCAA GCCAGTCCTA CTACATCGGA AATTCAGGGT GAGCTAATGC TTCTAGGTTT 61 GACTGGATCT TCTTCTTCAA GTCTTGATGC CTTGAACTTC CGGCATGGAC TAGCTTCGTA 121 TGTATTTTTA GCTTCTTAGA ATACTCTTAG TTTAGTAATT TTATGATAGA GGCTCTGGTG 181 ATGATGACTT CCAGATTTTG GGGAATGATA AGTTTTGAGT TATACAAGTT GATTATTGAT 241 TTTTATTAAA AAAAAAAAAA AAAAA Predicted gene structure (within gDNA segment 100003 to 102619): Exon 1 100775 100975 ( 201 n); cDNA 1 202 ( 202 n); score: 0.908 PPA cDNA 248 265 MATCH C10HBa0115K16.1+ SGN-E216150- 0.908 201 0.758 C PGS_C10HBa0115K16.1+_SGN-E216150- (100775 100975) Alignment (genomic DNA sequence = upper lines): AGTAATTCAA GCCAGTCTTA CTACATCGGA AATTCAGGGT GAGCTAATGC TTCTAGCTTG 100834 ||||| |||| ||||||| || |||||||||| |||||||||| |||||||||| |||||| || AGTAACTCAA GCCAGTCCTA CTACATCGGA AATTCAGGGT GAGCTAATGC TTCTAGGTTT 60 GACTGGATCT CCTTCTTCAA GTCTTGATGC CTTGAACTTC CGGCATGGAG TACCTTCTTA 100894 |||||||||| ||||||||| |||||||||| |||||||||| ||||||||| || |||| || GACTGGATCT TCTTCTTCAA GTCTTGATGC CTTGAACTTC CGGCATGGAC TAGCTTCGTA 120 TGTATTTTTA GCTT-TTAGA ATACTCTTAG TTTAGTCATT TGATCGTAGA TGTTCTTGTG 100953 |||||||||| |||| ||||| |||||||||| |||||| ||| | || |||| | ||| ||| TGTATTTTTA GCTTCTTAGA ATACTCTTAG TTTAGTAATT TTATGATAGA GGCTCTGGTG 180 ATGATGACTT CCAGGTTTTG GG 100975 |||||||||| |||| ||||| || ATGATGACTT CCAGATTTTG GG 202 hqPGS_C10HBa0115K16.1+_SGN-E216150- (100775 100975) ******************************************************************************** EST sequence 64 +strand 847 n (File: SGN-E543334+) 1 CGGGCCCCCC TCGAGTTTTT TTTTTTTTTT TTTTAGTCTT CAATCTCTTT CATATAAAAG 61 TAATAGGAAA TACTAAGTCT CAATCTCATA ATCTTAAGAC ACAAGAATAC TTGGGACACA 121 GCCCATACTT CAAAATACGA ATATAGAAAT ACTTAGTCTA TTACAATACT TTGAATGAAA 181 ACATAAAAGA CATATATGCC CTTGAGTCAA GTAAGGACAT ACTTCAACTT CTCTTGAACG 241 ATATTCTAAG TCCAAGTCTT CACTTCTCAA AACTCCTCAC CTACCAAGAA CTATATAGAT 301 AGATAAAAAT ATGGAGTTAG TACAACCACA TATACTAAGT ATGGCATTAT ACATAAAAAT 361 CATGAAAACG GACTTTATCG GAAATATGCA TCTTTTCATT TTTCAAAACA TATTTAATCA 421 TAATAACATC AAAAATCAAT TTGGAAACAC ATAAGATACT TATAGCATGT AATTTCCTCA 481 CTTAAATTCA TCCTAAGATT CACTTACGTC ACACAAAGAG AGACCGTCCA TACACCCTCT 541 CTAAATGTGC CAAAACGATC CTTAGGATTA CATATAATGA GTCACATACA CACTTCAAGG 601 CATCAAACAT ATCAACATAT AGACACTATG ACCTTTCCTC ATCAAAGGCT ATCAAAAGAC 661 TTACTTAAGT AGGTCAAGAA GATAAAGTCT ATGATTGACC TCTTCAAGAC TACCTAAATA 721 ATCCTTATGA CTTCCCAAGT TCGGATCATG TCCACATAAT CAACATCTTC CCTAATTAGA 781 GTCATTCTTA AGACTCATCT AGGTAAGATA TAAAGTGACC ATTCCTATGC CCCTTTCCAA 841 CTTAACT Predicted gene structure (within gDNA segment 105212 to 110918): Exon 1 106429 107001 ( 573 n); cDNA 42 616 ( 575 n); score: 0.873 Intron 1 107002 107142 ( 141 n); Pd: 0.997 (s: 0.78), Pa: 0.000 (s: 0.76) Exon 2 107143 107376 ( 234 n); cDNA 617 847 ( 231 n); score: 0.733 PPA cDNA 34 15 MATCH C10HBa0115K16.1+ SGN-E543334+ 0.833 807 0.953 C PGS_C10HBa0115K16.1+_SGN-E543334+ (106429 107001,107143 107376) Alignment (genomic DNA sequence = upper lines): AATCTCTTTC GTTTTAAAGT AAAAGGAAAT ACTAAGTCTC AATCTCATCG TCTTAGGACA 106488 |||||||||| | | ||||| || ||||||| |||||||||| |||||||| ||||| |||| AATCTCTTTC ATATAAAAGT AATAGGAAAT ACTAAGTCTC AATCTCATAA TCTTAAGACA 101 CAAGAATACT TGGGACACGG ACCATACTTC AAAATATGAA TATAGAAATA CTTAGTCTAT 106548 |||||||||| |||||||| | ||||||||| |||||| ||| |||||||||| |||||||||| CAAGAATACT TGGGACACAG CCCATACTTC AAAATACGAA TATAGAAATA CTTAGTCTAT 161 TACAATACTT TGAATGAAAA CATAAAAGAC ATATATATGC CCTCGAGTCA AGTGAGGACA 106608 |||||||||| |||||||||| |||||||||| |||||||| ||| |||||| ||| |||||| TACAATACTT TGAATGAAAA CATAAAAGAC --ATATATGC CCTTGAGTCA AGTAAGGACA 219 TACTTCAACT TCACTTGAAC GATCTTCTAA GTCCAAGCCT TCACTTCTCA AAGCTCCTCA 106668 |||||||||| || ||||||| ||| |||||| ||||||| || |||||||||| || ||||||| TACTTCAACT TCTCTTGAAC GATATTCTAA GTCCAAGTCT TCACTTCTCA AAACTCCTCA 279 CCTACCAAGA AC--TAT--A TAGATAAAAG CATGGAAATA GTACAACCAC ATGTACTAAG 106724 |||||||||| || ||| | ||||||||| ||||| || |||||||||| || ||||||| CCTACCAAGA ACTATATAGA TAGATAAAAA TATGGAGTTA GTACAACCAC ATATACTAAG 339 TATGGC-TTA TGCATAAAAA TCATGAAAAC GGACTTTATT GGAAATATGC CTCTTTTCA- 106782 |||||| ||| | |||||||| |||||||||| ||||||||| |||||||||| |||||||| TATGGCATTA TACATAAAAA TCATGAAAAC GGACTTTATC GGAAATATGC ATCTTTTCAT 399 -TTTAAAATC ATATTATAAT CATAATAACA TCATAAATCA ATTTAGAAAC ACATAAGATA 106841 ||| ||| | ||||| |||| |||||||||| ||| |||||| |||| ||||| |||||||||| TTTTCAAAAC ATATT-TAAT CATAATAACA TCAAAAATCA ATTTGGAAAC ACATAAGATA 458 CTTCTAGCAT GTAATTTCCT CACTTAAAGT CATCCTAAGA TTCACTTGAG TGACAGAAAG 106901 ||| |||||| |||||||||| |||||||| | |||||||||| ||||||| | | ||| |||| CTTATAGCAT GTAATTTCCT CACTTAAATT CATCCTAAGA TTCACTTACG TCACACAAAG 518 AGAGACCGCT CATACACTCT CTCTAGATGT GCCTAAACGA CCCTTAAGAT TACCTTTAAT 106961 |||||||| ||||||| || ||||| |||| ||| |||||| ||||| ||| ||| | |||| AGAGACCGTC CATACACCCT CTCTAAATGT GCCAAAACGA TCCTTAGGAT TACATATAAT 578 GATTCACATA CATACTTACA AAGCAATCAT AAACATCAAG GTAAGATTCT TCTACCAAAG 107021 || ||||||| || |||| || | || |||| | | ||||| GAGTCACATA CACACTT-CA AGGC-ATCAA ACATATCAAC .......... .......... 616 GTAAACTCTA AGTCTCACTT GAGTGAGTTG TGAAGCGACT GCCCATACAA TCCCTTACAC 107081 .......... .......... .......... .......... .......... .......... 616 ACACACTTAA GAGATCCAAT AGACTCAATA AGATAGAATC ATGCTCACAT AAATCACCAA 107141 .......... .......... .......... .......... .......... .......... 616 CACATAGATG ATATGACATT CTCTTTCCAA AGGCTATCAA AATACCTACT TAAGTAAATG 107201 | ||||| |||||| || || ||| |||||||||| || || |||| |||||| | .ATATAGACA CTATGACCTT TCCTCATCAA AGGCTATCAA AAGACTTACT TAAGTAGGTC 675 AAGAAGATAA CATACAT-AG TGACCTCTTC AAGATTACCT AAATAATCCT TAAAACAACG 107260 |||||||||| | || | |||||||||| |||| ||||| |||||||||| || || | AAGAAGATAA AGTCTATGAT TGACCTCTTC AAGACTACCT AAATAATCCT TATGACTTCC 735 TAAGGCTTAA AATATGTCCA CAAAATCAAC AAAATTCCCT AACTAGAGTC ATACTCAAGA 107320 || | | | ||||||| || ||||||| | |||||| || ||||||| || || |||| CAA-GTTCGG ATCATGTCCA CATAATCAAC -ATCTTCCCT AATTAGAGTC ATTCTTAAGA 793 CTTCCAAAGA TAAGACATGA AGAGATTATC CCTTATGCCC TCTTCACACT TTAGCT 107376 || || ||||| || | || || || || ||||||| ||| || ||| || CTCATCTAGG TAAGATATAA AGTGACCATT CC-TATGCCC -CTTTCCAAC TTAACT 847 hqPGS_C10HBa0115K16.1+_SGN-E543334+ (106429 107001,107143 107376) ******************************************************************************** EST sequence 224 -strand 709 n (File: SGN-E353367-) 1 CTTAAAGTCA TTCTAAGATT CACTTAAGTC ACACAAAGAG AGACCGCCCA TATACCCTCT 61 CTAGGTGTGC CTAAACAATC CTTATGATTA CTTATAATGA GTCACAGACA CACTTCAAGA 121 CATCAAATAT ATCAATATAT AAACCCTATG ACATTTCCTC ATCAAAGGCT ATAAAAAGAC 181 TTACTTAAGT AGGTCAAGAA GATAACGTCC ATGATTGACC TCTTCAAGAC TACCTAAATA 241 ATCCTTATGA CTTCCTTCGT TCGGATCATG TCCACATAAT CAACATCTTT CCTAATTAGG 301 GTCATTCTTA AGACTCATTT AGGTAAGATA CGAAGTGACC ATTCCTATTC CCCCTTCACA 361 CCTTAACTAG ACAACCCTTA ACTACTCTAT ATAGGTACTT ATTCCTTTTA CATACTCCAT 421 AACATAAGTC ATTAGTTCAT TAAGACTCAT ACATCACATA AAGGACATTC AAATAATTGT 481 CTTGCACAAA ACCTAGGAAA TCCACATAAC ACCTTCAAAG TCTATTGTGC AATGTTTAGA 541 TAGCGTCCCA TACCACCTCC TAAACTTCAT AAACTCCTCT AATTCTAATA GGTTTTCCAT 601 ATGATGAGAA TAGGCAATAA CCGACATAGA CCATGATAAC AAGACATGGA ATCTGAAGTT 661 CTATCCTACT TTGATGAGGT CGTTTAACTT GCCAATGGTA GAACTTAGA Predicted gene structure (within gDNA segment 102556 to 109055): Exon 1 106864 107001 ( 138 n); cDNA 1 136 ( 136 n); score: 0.826 Intron 1 107002 107142 ( 141 n); Pd: 0.997 (s: 0.74), Pa: 0.000 (s: 0.74) Exon 2 107143 107645 ( 503 n); cDNA 137 628 ( 492 n); score: 0.785 MATCH C10HBa0115K16.1+ SGN-E353367- 0.794 641 0.904 C PGS_C10HBa0115K16.1+_SGN-E353367- (106864 107001,107143 107645) Alignment (genomic DNA sequence = upper lines): CTTAAAGTCA TCCTAAGATT CACTTGAGTG ACAGAAAGAG AGACCGCTCA TACACTCTCT 106923 |||||||||| | |||||||| ||||| ||| ||| |||||| ||||||| || || || |||| CTTAAAGTCA TTCTAAGATT CACTTAAGTC ACACAAAGAG AGACCGCCCA TATACCCTCT 60 CTAGATGTGC CTAAACGACC CTTAAGATTA CCTTTAATGA TTCACATACA TACTTACAAA 106983 |||| ||||| |||||| | | |||| ||||| | | |||||| ||||| ||| |||| | || CTAGGTGTGC CTAAACAATC CTTATGATTA CTTATAATGA GTCACAGACA CACTT-C-AA 118 GCAATCATAA ACATCAAGGT AAGATTCTTC TACCAAAGGT AAACTCTAAG TCTCACTTGA 107043 | |||| | | ||||| GACATCAAAT ATATCAAT.. .......... .......... .......... .......... 136 GTGAGTTGTG AAGCGACTGC CCATACAATC CCTTACACAC ACACTTAAGA GATCCAATAG 107103 .......... .......... .......... .......... .......... .......... 136 ACTCAATAAG ATAGAATCAT GCTCACATAA ATCACCAACA CATAGATGAT ATGACATTCT 107163 | ||| | | |||||||| .......... .......... .......... .........A TATAAACCCT ATGACATTTC 157 CTTTCCAAAG GCTATCAAAA TACCTACTTA AGTAAATGAA GAAGATAACA TACAT-AGTG 107222 || ||||| ||||| |||| || |||||| |||| | || ||||||||| | ||| | || CTCATCAAAG GCTATAAAAA GACTTACTTA AGTAGGTCAA GAAGATAACG TCCATGATTG 217 ACCTCTTCAA GATTACCTAA ATAATCCTTA AAACAACGTA AGGCTTAAAA TATGTCCACA 107282 |||||||||| || ||||||| |||||||||| || | | | | | ||||||||| ACCTCTTCAA GACTACCTAA ATAATCCTTA TGACTTCCT- TCGTTCGGAT CATGTCCACA 276 AAATCAACAA AATTCCCTAA CTAGAGTCAT ACTCAAGACT TCCAAAGATA AGACATGAAG 107342 ||||||| | || ||||| ||| ||||| || |||||| || || ||| | |||| TAATCAAC-A TCTTTCCTAA TTAGGGTCAT TCTTAAGACT CATTTAGGTA AGATACGAAG 335 AGATTATCCC TTATGCCCTC TTCACACTTT AGCTAATAAA TCCTTAAGTC ACTTTAGATT 107402 || || || ||| ||| | ||||||| || | ||| || |||||| | ||| || | | TGACCATTCC -TATTCCCCC TTCACACCTT AACTAGACAA CCCTTAACT- ACTCTATA-T 392 AGGTACTCAT T-TATTTACG TACTCCTTAA CATAAATTAT TAGTTCATTA GTTCATTAAG 107461 ||||||| || | ||||| |||||| ||| | | || || |||||| |||||||||| AGGTACTTAT TCCTTTTACA TACTCCATAA C----A-TA- -AG-TCATTA GTTCATTAAG 444 GCACATACAT CACATAAAGG ACATTCTAGG AATGGTCTTG AACAAGACCT AGGAACTTCA 107521 | ||||||| |||||||||| |||||| | ||| |||||| |||| |||| ||||| | || ACTCATACAT CACATAAAGG ACATTCAAAT AATTGTCTTG CACAAAACCT AGGAAATCCA 504 AATAACACCT TTAAAGTCTA TTGTGCAATG TCTAGATAGC GTCCCATATC ACCACCTAAA 107581 ||||||||| | |||||||| |||||||||| | |||||||| |||||||| | ||| |||||| CATAACACCT TCAAAGTCTA TTGTGCAATG TTTAGATAGC GTCCCATACC ACCTCCTAAA 564 CTCCATCCAC TCCTCAAATG CTAATAGGTA TTCCATATGA TGAGAATAGG CAATAACCGA 107641 || ||| || ||||| ||| ||||||||| |||||||||| |||||||||| |||||||||| CTTCATAAAC TCCTCTAATT CTAATAGGTT TTCCATATGA TGAGAATAGG CAATAACCGA 624 CATA 107645 |||| CATA 628 hqPGS_C10HBa0115K16.1+_SGN-E353367- (106864 107001,107143 107645) ******************************************************************************** EST sequence 230 -strand 823 n (File: SGN-E548861-) 1 TGAGTCACAT ACACACTTCA AGGCATCAAA CATATCAACA TATAGACACT ATGACCTTTC 61 CTCATCAAAG GCTATCAAAA GACTTACTTA AGTAGGTCAA GAAGATAAAG TCTATGATTG 121 ACCTCTTCAA GACTACCTAA ATAATCCTTA TGACTTCCCA AGTTCGGATC ATGTCCACAT 181 AATCAACATC TTCCCTAATT AGAGTCATTC TTAAGACTCA TCTAGGTAAG ATATAAAGTG 241 ACCATTCCTA TGCCCCTTTC ACAACTTAAC TAGACAACCC TTAACTATTC TAGATAGGTA 301 TTTATTCCTT TTATACTCTC CATAACATAA GTTATTAGTT CATTAAAACT CATATATCAC 361 ATAAGGACAT TCAAATAATG GTCTTGGACA AGACCTAGGA ACTCCACATA ACACCTTCAA 421 AGTCTATTGG GCAATGTTTA GATAGTGTCC CATACAGCCA CCTAAACTCC ATAAACTCCT 481 CTAATGCTTA TAGGTATTAA ATATGATGAG AATACGCAAT TACCGACATA GACCATGATA 541 GCTAGCCATG GAATCTGGAG TTCTATACTA CTGCGATGAG GTTATTCTAC TTGCCAATGG 601 TAGAACTTGG ACACATCCCA TGTAGGCACA TGGTTAAGGA ATATGAAGAA CATGCTTCGT 661 AATCTAGTCT CTTTGTTAAC TAGAACTACT TTACCTTACC ATACTCACTC GGTGGTAGGC 721 TTCGTTCTTA TAGAGTAATT CATACATTAG GTTCACATAA AAGGGTTCCA TAACAAGTTC 781 ATAACCCAAT CACATTTACC CTACCAAGGA AGGTTCACTA GGG Predicted gene structure (within gDNA segment 100994 to 109055): Exon 1 106961 107001 ( 41 n); cDNA 1 39 ( 39 n); score: 0.780 Intron 1 107002 107142 ( 141 n); Pd: 0.997 (s: 0.78), Pa: 0.000 (s: 0.76) Exon 2 107143 107866 ( 724 n); cDNA 40 774 ( 735 n); score: 0.733 MATCH C10HBa0115K16.1+ SGN-E548861- 0.733 765 0.930 C PGS_C10HBa0115K16.1+_SGN-E548861- (106961 107001,107143 107866) Alignment (genomic DNA sequence = upper lines): TGATTCACAT ACATACTTAC AAAGCAATCA TAAACATCAA GGTAAGATTC TTCTACCAAA 107020 ||| |||||| ||| |||| | || || |||| | | ||||| TGAGTCACAT ACACACTT-C AAGGC-ATCA AACATATCAA C......... .......... 39 GGTAAACTCT AAGTCTCACT TGAGTGAGTT GTGAAGCGAC TGCCCATACA ATCCCTTACA 107080 .......... .......... .......... .......... .......... .......... 39 CACACACTTA AGAGATCCAA TAGACTCAAT AAGATAGAAT CATGCTCACA TAAATCACCA 107140 .......... .......... .......... .......... .......... .......... 39 ACACATAGAT GATATGACAT TCTCTTTCCA AAGGCTATCA AAATACCTAC TTAAGTAAAT 107200 | ||||| |||||| | | || || |||||||||| ||| || ||| ||||||| | ..ATATAGAC ACTATGACCT TTCCTCATCA AAGGCTATCA AAAGACTTAC TTAAGTAGGT 97 GAAGAAGATA ACATACAT-A GTGACCTCTT CAAGATTACC TAAATAATCC TTAAAACAAC 107259 ||||||||| | | || | ||||||||| ||||| |||| |||||||||| ||| || | CAAGAAGATA AAGTCTATGA TTGACCTCTT CAAGACTACC TAAATAATCC TTATGACTTC 157 GTAAGGCTTA AAATATGTCC ACAAAATCAA CAAAATTCCC TAACTAGAGT CATACTCAAG 107319 || | | | |||||| ||| |||||| | | ||||| ||| |||||| ||| || ||| CCAA-GTTCG GATCATGTCC ACATAATCAA C-ATCTTCCC TAATTAGAGT CATTCTTAAG 215 ACTTCCAAAG ATAAGACATG AAGAGATTAT CCCTTATGCC CTCTTCACAC TTTAGCTAAT 107379 ||| || ||||| || ||| || || || |||||| | |||||| ||| ||| ACTCATCTAG GTAAGATATA AAGTGACCAT TCC-TATGCC CCTTTCACAA CTTAACTAGA 274 AAATCCTTAA GTCACTTTAG ATTAGGTACT CATTTATTTA CGTACTCCTT AACATAAATT 107439 || |||||| | | | ||| | |||||| | ||| ||| |||| | | ||| || CAACCCTTAA CT-ATTCTAG A-TAGGTATT TATTCCTTT- TATACT-C-T -CCAT-AA-C 326 ATTAGTTCAT TAGTTCATTA AGGCACATAC ATCACATAAA GGACATTCTA GGAATGGTCT 107499 || |||| || |||||||||| | | |||| ||||||| || |||||||| | |||||||| ATAAGTT-AT TAGTTCATTA AAACTCATAT ATCACAT-AA GGACATTCAA ATAATGGTCT 384 TGAACAAGAC CTAGGAACTT CAAATAACAC CTTTAAAGTC TATTGTGCAA TGTCTAGATA 107559 || ||||||| ||||||||| || ||||||| ||| |||||| ||||| |||| ||| |||||| TGGACAAGAC CTAGGAACTC CACATAACAC CTTCAAAGTC TATTGGGCAA TGTTTAGATA 444 GCGTCCCATA TCACCACCTA AACTCCATCC ACTCCTCAAA TGCTAATAGG TATTCCATAT 107619 | |||||||| ||||||| |||||||| ||||||| || |||| ||||| |||| |||| GTGTCCCATA CAGCCACCTA AACTCCATAA ACTCCTCTAA TGCTTATAGG TATTAAATAT 504 GATGAGAATA GGCAA-TA-- -AC--CGA-C AT-A-A--T- -CC---G-A- ----AGTTCT 107657 |||||||||| |||| || || || | || | | | || | | |||||| GATGAGAATA CGCAATTACC GACATAGACC ATGATAGCTA GCCATGGAAT CTGGAGTTCT 564 ATCCTACTCC GATGAGGTTG TTCTACTTGT CAATGGTAGA ACTTGAACAC ATCCCATGTA 107717 || ||||| | ||||||||| ||||||||| |||||||||| ||||| |||| |||||||||| ATACTACTGC GATGAGGTTA TTCTACTTGC CAATGGTAGA ACTTGGACAC ATCCCATGTA 624 GGCACATGGT TAAGGAATAT GAAGGAC-TT ATTTGTATTC TAGTCTCATA CTTAACTAGA 107776 |||||||||| |||||||||| |||| || | || ||| || ||||||| | ||||||||| GGCACATGGT TAAGGAATAT GAAGAACATG CTTCGTAATC TAGTCTCTTT GTTAACTAGA 684 ATTACTTTCC CTTATTATAC TAACTCGGTG CTAGCCTTAG TTCTCATAGA GTAATTCATA 107836 | |||||| | |||| |||| | |||||||| ||| ||| | |||| ||||| |||||||||| ACTACTTTAC CTTACCATAC TCACTCGGTG GTAGGCTTCG TTCTTATAGA GTAATTCATA 744 CATTAGGTTC ACATAAAAGA GTTCCATAAC 107866 |||||||||| ||||||||| |||||||||| CATTAGGTTC ACATAAAAGG GTTCCATAAC 774 hqPGS_C10HBa0115K16.1+_SGN-E548861- (106961 107001,107143 107866) ******************************************************************************** EST sequence 175 -strand 506 n (File: SGN-E303196-) 1 TCTCCATAAC ATAAGTTATT AGTTCATTAA AACTCATATA TCACATAAGG ACATTCAAAT 61 AATGGTCTTG GACAAGACCT AGGAACTCCA CATAACACCT TCAAAGTCTA TTGGGCAATG 121 TTTAGATAGT GTCCCATACA GCCACCTAAA CTCCATAAAC TCCTCTAATG CTTATAGGTA 181 TTAAATATGA TGAGAATACG CAATTACCGA CATAGACCAT GATAGCTAGC CATGGAATCT 241 GGAGTTCTAT ACTACTGCGA TGAGGTTATT CTACTTGCCA ATGGTAGAAC TTGGACACAT 301 CCCATGTAGG CACATGGTTA AGGAATATGA AGAACATGCT TCGTAATCTA GTCTCTTTGT 361 TAACTAGAAC TACTTTACCT TACCATACTC ACTCGGTGGT AGGCTTCGTT CTTATAGAGT 421 AATTCATACA TTAGGTTCAC ATAAAAGGGT TCCATAACAA GTTCATAACC CAATCACATT 481 TACCCTACCA AGGAAGGTTC ACTAGG Predicted gene structure (within gDNA segment 104154 to 109045): Exon 1 107440 107866 ( 427 n); cDNA 11 458 ( 448 n); score: 0.746 MATCH C10HBa0115K16.1+ SGN-E303196- 0.746 427 0.844 C PGS_C10HBa0115K16.1+_SGN-E303196- (107440 107866) Alignment (genomic DNA sequence = upper lines): ATTAGTTCAT TAGTTCATTA AGGCACATAC ATCACATAAA GGACATTCTA GGAATGGTCT 107499 || |||| || |||||||||| | | |||| ||||||| || |||||||| | |||||||| ATAAGTT-AT TAGTTCATTA AAACTCATAT ATCACAT-AA GGACATTCAA ATAATGGTCT 68 TGAACAAGAC CTAGGAACTT CAAATAACAC CTTTAAAGTC TATTGTGCAA TGTCTAGATA 107559 || ||||||| ||||||||| || ||||||| ||| |||||| ||||| |||| ||| |||||| TGGACAAGAC CTAGGAACTC CACATAACAC CTTCAAAGTC TATTGGGCAA TGTTTAGATA 128 GCGTCCCATA TCACCACCTA AACTCCATCC ACTCCTCAAA TGCTAATAGG TATTCCATAT 107619 | |||||||| ||||||| |||||||| ||||||| || |||| ||||| |||| |||| GTGTCCCATA CAGCCACCTA AACTCCATAA ACTCCTCTAA TGCTTATAGG TATTAAATAT 188 GATGAGAATA GGCAA-TA-- -AC--CGA-C AT-A-A--T- -CC---GAA- -----GTTCT 107657 |||||||||| |||| || || || | || | | | || ||| ||||| GATGAGAATA CGCAATTACC GACATAGACC ATGATAGCTA GCCATGGAAT CTGGAGTTCT 248 ATCCTACTCC GATGAGGTTG TTCTACTTGT CAATGGTAGA ACTTGAACAC ATCCCATGTA 107717 || ||||| | ||||||||| ||||||||| |||||||||| ||||| |||| |||||||||| ATACTACTGC GATGAGGTTA TTCTACTTGC CAATGGTAGA ACTTGGACAC ATCCCATGTA 308 GGCACATGGT TAAGGAATAT GAAGGAC-TT ATTTGTATTC TAGTCTCATA CTTAACTAGA 107776 |||||||||| |||||||||| |||| || | || ||| || ||||||| | ||||||||| GGCACATGGT TAAGGAATAT GAAGAACATG CTTCGTAATC TAGTCTCTTT GTTAACTAGA 368 ATTACTTTCC CTTATTATAC TAACTCGGTG CTAGCCTTAG TTCTCATAGA GTAATTCATA 107836 | |||||| | |||| |||| | |||||||| ||| ||| | |||| ||||| |||||||||| ACTACTTTAC CTTACCATAC TCACTCGGTG GTAGGCTTCG TTCTTATAGA GTAATTCATA 428 CATTAGGTTC ACATAAAAGA GTTCCATAAC 107866 |||||||||| ||||||||| |||||||||| CATTAGGTTC ACATAAAAGG GTTCCATAAC 458 hqPGS_C10HBa0115K16.1+_SGN-E303196- (107440 107866) ******************************************************************************** EST sequence 109 +strand 782 n (File: SGN-E547215+) 1 CTCTCAAGTC AAATCCTCCA TTGAAGAAAC TTTAAGCTCC AAGGAAGAGG ATCAAATTCC 61 CCATGTTTTA ACCTAAATTT CGTGGATAGG TCTTCAATGA GGTGGTGGCA ACTGAGGATT 121 CCTAGAGTTG AAGCTTGGGA AGTAGATTTC TCTCAAGATT GGATATGAGT CGAAGGAGGA 181 CACCTGCATG AAGTGTGAAG AAAGGAGTAG TGAATGAGGG ATTTCCTTCC CTAGACAAAT 241 AAGTTCCTCA AGATGAAAAA ATGCCTACAG CTAGTTAAGC GAATGAGGTT CTGGTAGTTC 301 CCCTGGAGAT GACTAAAGAG GAGGTTAAAA GAGCTCTTAT TGCCCTATAC CGAGCCACTT 361 AAGAATATAG TGAAGTGGGG CCTAGGGTGA ATTCTCTTGA GAGTACCATG ACTTCTAGGT 421 TGAGGTACTT TGTTCAAAGG TGGGATAGGA TCCCCAAGAG TTTCTAGATT GTGTTTATAA 481 GGTGTTGAAT GCTATGGACG TGACTTCAAA AGAGAAGGTG GAGTTGTGTT CATATCAATT 541 GAGGAAGGTT GCTCAAGTGT GGTACATATA ATGGAAAGAA AATAGTCCGG TTGAATCCGA 601 TCCTATAGAA CAAGATGAGT TTAAGGAAGC ATTCTTAGCA AAGTACTTTT TACGAGAACA 661 GAGAAGATAA GGTTGAGAAG TTTATAAGCC TTAGGCAAGG TAACATGAGT ATGGATGAAA 721 TTTTCCTTGA AATTTACCCT ATTGTCTAAG TATGATCCAT CTTTAGTGTC TAACCCTAGG 781 GA Predicted gene structure (within gDNA segment 120178 to 112179): Exon 1 114043 113984 ( 60 n); cDNA 105 161 ( 57 n); score: 0.700 Intron 1 113983 113443 ( 541 n); Pd: 0.000 (s: 0.66), Pa: 0.998 (s: 0.60) Exon 2 113442 113159 ( 284 n); cDNA 162 438 ( 277 n); score: 0.671 Intron 2 113158 113129 ( 30 n); Pd: 0.000 (s: 0.79), Pa: 0.000 (s: 0.87) ?? Exon 3 113128 112789 ( 340 n); cDNA 439 782 ( 344 n); score: 0.790 MATCH C10HBa0115K16.1- SGN-E547215+ 0.732 684 0.875 C PGS_C10HBa0115K16.1-_SGN-E547215+ (114043 113984,113442 113159,113128 112789) Alignment (genomic DNA sequence = upper lines): GTGGCAAGTG AGGAGTCTCT TGGAAGTGAA GCTTGGGAAT AACATTTTTA CAACCTATTT 113984 ||||||| || |||| || | | || |||| ||||||||| | |||| | | ||| GTGGCAACTG AGGATTC-C- TAGAGTTGAA GCTTGGGAAG TAGATTTCT- CTCAAGATTG 161 GTTATGTCCT CATATGATTT GAGGACATAG GTAGTTTAAT TTTTCAAAAG ACATTGTAAT 113924 .......... .......... .......... .......... .......... .......... 161 AGACTTTAGT ATTCCATTTT ATTGATAAAT GGGTTGTGAC CCTAAGATTG TCATGTGTCT 113864 .......... .......... .......... .......... .......... .......... 161 AAGATGGCTA TGAAGAGACT TAGTCTTTCT TATGTTTCTA TAAAAGAGAT TTGAACTATT 113804 .......... .......... .......... .......... .......... .......... 161 GTTATGAATA TATATATATA TATATATATA TATATATATA TATATATATA TATATATATA 113744 .......... .......... .......... .......... .......... .......... 161 TATATCTGAG AGGTCGAGTA CGCCTTGTGG TGACTTAAGG ATGCCCTAAC TTCTAGGGTG 113684 .......... .......... .......... .......... .......... .......... 161 TACTTTGGAT CGTGACAAAC TTGGTAGCAG AGCATAAGGT TATGAAGTAG TCTTTAGGAT 113624 .......... .......... .......... .......... .......... .......... 161 TCAAAATCTC ATGAAAATAA CATCTAGTAG AGTCTTGTTC ATTGTGGTAG GTCGCGACAC 113564 .......... .......... .......... .......... .......... .......... 161 ATCTATGAGC AAGATGTTAT AGGACGATAG AAGTTACCCT TTGCTTCATT GACTGTTGTG 113504 .......... .......... .......... .......... .......... .......... 161 TCATCCTCAT AGAGTTGAGG TTATGATTGT CTTTTCCTTA TATCTTCTCT TATGTTTATA 113444 .......... .......... .......... .......... .......... .......... 161 GGATATGACT ACAAGAAGGA TGACCACTAG AAGAGTGGAA GAGAAAGTTC CTCCTCGAGT 113384 ||||||| | ||| |||| | | | ||| || ||| || | | | ||| .GATATGAGT CGAAGGAGGA CACCTGCATG AAGTGT-GAA GAAAGGAGTA GTGAATGAG- 218 TGAACATACT CCACAAGGTG TTCAAGTTCC TCAAGTTGAA CAAGTCCCTA TAACTAATGA 113324 || | || | | || ||||||| ||||| |||| || | |||| | ||| | | GGAT-TTCCT TCCCTAGACA AATAAGTTCC TCAAGATGAA AAAATGCCTA CAGCTAGTTA 277 AGGGAATGAG GTTTCGGTTG TTCCCTCAGA CATAACTAAT GGGGAGATTA GAGAGGCTCT 113264 || ||||||| ||| ||| | ||||| || || ||||| | |||| ||| | ||||| AGCGAATGAG GTTCTGGTAG TTCCCCTGGA GATGACTAAA GAGGAGGTTA AAAGAGCTCT 337 CCTTACCCTA GACCAAACCA TGACAACTCA AGTGATAGAG ACATTGGGCC TAGGATGAAT 113204 || ||||| ||| | ||| || | | | |||| | | | ||||| |||| ||||| TATTGCCCTA TACCGAGCCA -CTTAA--GA A-T-ATAGTG AAGTGGGGCC TAGGGTGAAT 392 GATTTTGAGA GTACCATGAC CTCTAGATTG AGGGGCTTTG -TCAGAATGA ATCCTCATAT 113145 | |||||| |||||||||| ||||| ||| ||| ||||| ||| | TCTCTTGAGA GTACCATGAC TTCTAGGTTG AGGTACTTTG TTCAAA.... .......... 438 GGTCCTTGGT TCTAAGG-TG GGAGAGGATC CGCAAGAGTT TCTAGATGGT GTCTATAAGG 113086 | || ||| |||||| | |||||||| ||||||| || || ||||||| .......... ......GGTG GGATAGGATC CCCAAGAGTT TCTAGATTGT GTTTATAAGG 482 TGTTGAGTGC TATGGGAGTG ACTTCTAGGG TGAAGAGGGA GTTAGCTTCA TACCAATTGA 113026 |||||| ||| ||||| ||| ||||| | | |||| ||| ||| |||| || ||||||| TGTTGAATGC TATGGACGTG ACTTCAAAAG AGAAGGTGGA GTTGTGTTCA TATCAATTGA 542 GGGTAGATGC TCAAGTATGG TACACTCAAT GGAAAGACAA TAGGCCGGTT GAGTCGGGTC 112966 || | ||| |||||| ||| |||| ||| ||||||| || ||| |||||| || || | || GGAAGGTTGC TCAAGTGTGG TACATATAAT GGAAAGAAAA TAGTCCGGTT GAATCCGATC 602 CTATAGAATG AGAAGAGGTT AAGGAAACTT TCTTAGGAAT GTACTTTCCC ATGAAAAGAG 112906 |||||||| ||| ||| || |||||| | | |||||| || ||||||| | || || || CTATAGAACA AGATGAGTTT AAGGAAGCAT TCTTAGCAAA GTACTTT-TT ACGAGAACAG 661 GGAGGTGAAG GTTGAGAAGT TTATAAACCT TAGGCAAGGT AACATGAGTG TTGA--AGAG 112848 || | ||| |||||||||| |||||| ||| |||||||||| ||||||||| | || | | AGAAGATAAG GTTGAGAAGT TTATAAGCCT TAGGCAAGGT AACATGAGTA TGGATGAAAT 721 TAT--TTGAA GTTTACCCTA TTGTCTAAGT ATTCTCCATC CTTGGTGTCT AACCCTAGGG 112790 | | ||||| ||||||||| |||||||||| || |||||| || |||||| |||||||||| TTTCCTTGAA ATTTACCCTA TTGTCTAAGT ATGATCCATC TTTAGTGTCT AACCCTAGGG 781 A 112789 | A 782 hqPGS_C10HBa0115K16.1-_SGN-E547215+ (113128 112789) ******************************************************************************** EST sequence 179 +strand 574 n (File: SGN-E550629+) 1 CTTTTGAGCC AAAGAATTAT TAATACATGC AAGACACTAT TCTAGAATTG TTATTTTAGT 61 TAGGTTTTAC CTCAATATTC TCCTATGGTT CCCACAATCC TAGTTATGGA GTTTAGTTAA 121 CCATAGTCAT AATCACAATA TTCAAATATA TCATATAAGA ATTCATGTAC TTAATTCAAA 181 GAGAAAGAGT AAAATCTGAG AGTTTTCTTG ATTTATCACA AAAAATCACC AACAATTAAT 241 GATAATCAAA AGTCTAACAA TAAAATGTTT TCTTATACGA TGTCTAACAA TACGGAGTCT 301 AACAATGATC CAGAGTCTTA CCTCAAAAAT GATGTTTTTA GAACTATTTA TAGAAAATAA 361 AAACCTAATT AAACAAGGAC TATATTTGCT GGAAATCTGC CAAAACGCGG CTGGGTCGAC 421 GGACCTCACG ACGGATCGTC GTGGTCACGA CAGACCGTCA TGGACTCCGT TGTCCCATAC 481 TTATGCAATT TCTTTTGCTG CTCTCTTCAT TACCCTCGAC GGCATGTATG ACGGACCGTC 541 GTAGGCACAA CGGTCCGTCG AGGGTCTTCG TTCC Predicted gene structure (within gDNA segment 121761 to 118561): Exon 1 121071 120642 ( 430 n); cDNA 1 444 ( 444 n); score: 0.751 Intron 1 120641 120345 ( 297 n); Pd: 0.000 (s: 0.94), Pa: 0.000 (s: 0) Exon 2 120344 120321 ( 24 n); cDNA 445 468 ( 24 n); score: 0.750 MATCH C10HBa0115K16.1- SGN-E550629+ 0.751 454 0.791 C PGS_C10HBa0115K16.1-_SGN-E550629+ (121071 120642,120344 120321) Alignment (genomic DNA sequence = upper lines): CTTCTAAGCG AAAGAATTAT TAATACATAC AAGACACTAT TCTAGAATTG TTCTTTTAGC 121012 ||| | ||| |||||||||| |||||||| | |||||||||| |||||||||| || |||||| CTTTTGAGCC AAAGAATTAT TAATACATGC AAGACACTAT TCTAGAATTG TTATTTTAGT 60 TAGGGTTTAT CTCATTATTT GCCTATGGTT CCCACAACCC TAGTTATGGA TTTTAGTTCC 120952 |||| |||| |||| |||| ||||||||| ||||||| || |||||||||| ||||||| TAGGTTTTAC CTCAATATTC TCCTATGGTT CCCACAATCC TAGTTATGGA GTTTAGTTAA 120 TCATAGCCAT AAACACAATA TTCAAATATA TTAAATAAGA ATTCATCTAC TTAATTCAAT 120892 ||||| ||| || ||||||| |||||||||| | | |||||| |||||| ||| ||||||||| CCATAGTCAT AATCACAATA TTCAAATATA TCATATAAGA ATTCATGTAC TTAATTCAAA 180 GAGAAAGAGT AAAGTCCGAA AAATTGCTTG ATTAATTACC AAAAATCACT TGTAA-GAAT 120833 |||||||||| ||| || || | || |||| ||| || || ||||||||| || ||| GAGAAAGAGT AAAATCTGAG AGTTTTCTTG ATTTATCACA AAAAATCACC AACAATTAAT 240 -CT-CCAAAA AATCAAACAC T--AA----- ---TAAACAA AGTCTAATAA TATGATGTCT 120785 | ||| | || |||| | || || || | |||||| || || | |||| GATAATCAAA AGTCTAACAA TAAAATGTTT TCTTATACGA TGTCTAACAA TACGGAGTCT 300 ---AATCTCC CAGAGTCTAA CCTCAAAAAT GAGGTTTTTC GAACTATTTA TAAAAAAATA 120728 ||| | |||||||| | |||||||||| || |||||| |||||||||| | | |||||| AACAATGATC CAGAGTCTTA CCTCAAAAAT GATGTTTTTA GAACTATTTA T-AGAAAATA 359 AAAACCTAAT TAAAGAAGGA TTCTAAATTA CTGGAAATCT GCCAAAACGC GGCTGGGTCG 120668 |||||||||| |||| ||||| | | | || |||||||||| |||||||||| |||||||||| AAAACCTAAT TAAACAAGGA CTAT-ATTTG CTGGAAATCT GCCAAAACGC GGCTGGGTCG 418 ACGGACCACG CGACGGACCG TCGTGGACTC CGTCGTCCCA TACTTGGTGC AATTTTCTTC 120608 ||||||| | ||||||| || |||||| ACGGACCTCA CGACGGATCG TCGTGG.... .......... .......... .......... 444 TGTTGCTTTC TTCATTCCCC TCGACGGCAA GTGTGACGGA CCGTCATTAG GCACAACGGT 120548 .......... .......... .......... .......... .......... .......... 444 CCGTCAGAGG GTCTCGTTTC AAAATACTTC AACTCTTGAA ATCTGGGTAC TGGGATCACT 120488 .......... .......... .......... .......... .......... .......... 444 TCTCTGATCT TCACGACGAA CCTGCAGGAC GGACCGTCAT AGCCATGACG GGACCGTCGC 120428 .......... .......... .......... .......... .......... .......... 444 AAGCTTCGTA ATGCCACACT TGGTCAGACT TCCCCATCTT CCTTCAGCAG CTTCGCTACG 120368 .......... .......... .......... .......... .......... .......... 444 CTGCCACCTA CGGACCGTCA CAGGCACGAC GGACCATCAT AAGCTCC 120321 |||||| |||| |||| |||| .......... .......... ...TCACGAC AGACCGTCAT GGACTCC 468 hqPGS_C10HBa0115K16.1-_SGN-E550629+ (121071 120642,120344 120321) ******************************************************************************** EST sequence 181 +strand 574 n (File: SGN-E550645+) 1 CTTTTGAGCC AAAGAATTAT TAATACATGC AAGACACTAT TCTAGAATTG TTATTTTAGT 61 TAGGTTTTAC CTCAATATTC TCCTATGGTT CCCACAATCC TAGTTATGGA GTTTAGTTAA 121 CCATAGTCAT AATCACAATA TTCAAATATA TCATATAAGA ATTCATGTAC TTAATTCAAA 181 GAGAAAGAGT AAAATCTGAG AGTTTTCTTG ATTTATCACA AAAAATCACC AACAATTAAT 241 GATAATCAAA AGTCTAACAA TAAAATGTTT TCTTATACGA TGTCTAACAA TACGGAGTCT 301 AACAATGATC CAGAGTCTTA CCTCAAAAAT GATGTTTTTA GAACTATTTA TAGAAAATAA 361 AAACCTAATT AAACAAGGAC TATATTTGCT GGAAATCTGC CAAAACGCGG CTGGGTCGAC 421 GGACCTCACG ACGGATCGTC GTGGTCACGA CAGACCGTCA TGGACTCCGT TGTCCCATAC 481 TTATGCAATT TCTTTTGCTG CTCTCTTCAT TACCCTCGAC GGCATGTATG ACGGACCGTC 541 GTAGGCACAA CGGTCCGACG AGGGTCTTCG TTCC Predicted gene structure (within gDNA segment 121761 to 118561): Exon 1 121071 120642 ( 430 n); cDNA 1 444 ( 444 n); score: 0.751 Intron 1 120641 120345 ( 297 n); Pd: 0.000 (s: 0.94), Pa: 0.000 (s: 0) Exon 2 120344 120321 ( 24 n); cDNA 445 468 ( 24 n); score: 0.750 MATCH C10HBa0115K16.1- SGN-E550645+ 0.751 454 0.791 C PGS_C10HBa0115K16.1-_SGN-E550645+ (121071 120642,120344 120321) Alignment (genomic DNA sequence = upper lines): CTTCTAAGCG AAAGAATTAT TAATACATAC AAGACACTAT TCTAGAATTG TTCTTTTAGC 121012 ||| | ||| |||||||||| |||||||| | |||||||||| |||||||||| || |||||| CTTTTGAGCC AAAGAATTAT TAATACATGC AAGACACTAT TCTAGAATTG TTATTTTAGT 60 TAGGGTTTAT CTCATTATTT GCCTATGGTT CCCACAACCC TAGTTATGGA TTTTAGTTCC 120952 |||| |||| |||| |||| ||||||||| ||||||| || |||||||||| ||||||| TAGGTTTTAC CTCAATATTC TCCTATGGTT CCCACAATCC TAGTTATGGA GTTTAGTTAA 120 TCATAGCCAT AAACACAATA TTCAAATATA TTAAATAAGA ATTCATCTAC TTAATTCAAT 120892 ||||| ||| || ||||||| |||||||||| | | |||||| |||||| ||| ||||||||| CCATAGTCAT AATCACAATA TTCAAATATA TCATATAAGA ATTCATGTAC TTAATTCAAA 180 GAGAAAGAGT AAAGTCCGAA AAATTGCTTG ATTAATTACC AAAAATCACT TGTAA-GAAT 120833 |||||||||| ||| || || | || |||| ||| || || ||||||||| || ||| GAGAAAGAGT AAAATCTGAG AGTTTTCTTG ATTTATCACA AAAAATCACC AACAATTAAT 240 -CT-CCAAAA AATCAAACAC T--AA----- ---TAAACAA AGTCTAATAA TATGATGTCT 120785 | ||| | || |||| | || || || | |||||| || || | |||| GATAATCAAA AGTCTAACAA TAAAATGTTT TCTTATACGA TGTCTAACAA TACGGAGTCT 300 ---AATCTCC CAGAGTCTAA CCTCAAAAAT GAGGTTTTTC GAACTATTTA TAAAAAAATA 120728 ||| | |||||||| | |||||||||| || |||||| |||||||||| | | |||||| AACAATGATC CAGAGTCTTA CCTCAAAAAT GATGTTTTTA GAACTATTTA T-AGAAAATA 359 AAAACCTAAT TAAAGAAGGA TTCTAAATTA CTGGAAATCT GCCAAAACGC GGCTGGGTCG 120668 |||||||||| |||| ||||| | | | || |||||||||| |||||||||| |||||||||| AAAACCTAAT TAAACAAGGA CTAT-ATTTG CTGGAAATCT GCCAAAACGC GGCTGGGTCG 418 ACGGACCACG CGACGGACCG TCGTGGACTC CGTCGTCCCA TACTTGGTGC AATTTTCTTC 120608 ||||||| | ||||||| || |||||| ACGGACCTCA CGACGGATCG TCGTGG.... .......... .......... .......... 444 TGTTGCTTTC TTCATTCCCC TCGACGGCAA GTGTGACGGA CCGTCATTAG GCACAACGGT 120548 .......... .......... .......... .......... .......... .......... 444 CCGTCAGAGG GTCTCGTTTC AAAATACTTC AACTCTTGAA ATCTGGGTAC TGGGATCACT 120488 .......... .......... .......... .......... .......... .......... 444 TCTCTGATCT TCACGACGAA CCTGCAGGAC GGACCGTCAT AGCCATGACG GGACCGTCGC 120428 .......... .......... .......... .......... .......... .......... 444 AAGCTTCGTA ATGCCACACT TGGTCAGACT TCCCCATCTT CCTTCAGCAG CTTCGCTACG 120368 .......... .......... .......... .......... .......... .......... 444 CTGCCACCTA CGGACCGTCA CAGGCACGAC GGACCATCAT AAGCTCC 120321 |||||| |||| |||| |||| .......... .......... ...TCACGAC AGACCGTCAT GGACTCC 468 hqPGS_C10HBa0115K16.1-_SGN-E550645+ (121071 120642,120344 120321) ******************************************************************************** EST sequence 114 +strand 716 n (File: SGN-E578039+) 1 CGAGGGTCTT TGTTCTAATA CACTTCAACT CTTGGAATTT GGGTACTGGG ATCACTTCTC 61 TGAACTTCAC GACGAACCTG CAGGACGGAC CGTCAGATCC ACGACGGACC GTCACAAGCT 121 TCGTAATCCC ACACTTAGTC AGACTTCCCT ATCTTCCTTC AGCAGCTGCA CTACGCTTCC 181 ACCTACGGAC CGTCACAAGC ACGACGGACC GTCATAAGCT CCGTAGGTGG TTTCTTCTGC 241 ATTTCTTCGC TCAAAATCTC CGCATTCAGC TTTGGACAGA TTTCCTGCAA AACAAAGAGT 301 AACTTATATA AAAATTAGCA CAAAAAGGCT TTTGGACACA CTAAGCTTAA GGAAAAAGTA 361 TTAATAATAC CGTGAAACCA CGGTATATCA ACACCCTCAA CTTAAATTAG TTGTTTGTCC 421 TCAAGCGACG CACTATGACT CACTACACAA TCTTTGTACA ATAGTATCCA TGTTTTATCC 481 TTTGCAATCA TTTGGCTATC AATCCCGATT AATCTCATCA AATCTATGCA TGCTATCACT 541 ATTAGGTTTG AATTTTGTGG GATCAGAATA TGACACAGAC TTACCATGCA CTAACACCTA 601 TCCTCTTCAA TTTCTCACCG AGGTGCTAAC AATTCTAGTA TTGCAACTAG TGTCCTCACT 661 ATAAGACAAA ATCCTCCTTT TTCACACAGT GATTTTAGTT TGAGTATAAG GATTAC Predicted gene structure (within gDNA segment 121494 to 116284): Exon 1 120541 120136 ( 406 n); cDNA 2 408 ( 407 n); score: 0.890 MATCH C10HBa0115K16.1- SGN-E578039+ 0.890 406 0.567 C PGS_C10HBa0115K16.1-_SGN-E578039+ (120541 120136) Alignment (genomic DNA sequence = upper lines): GAGGGTCTCG TTTCAAA-AT ACTTCAACTC TTGAAATCTG GGTACTGGGA TCACTTCTCT 120483 |||||||| ||| || | |||||||||| ||| ||| || |||||||||| |||||||||| GAGGGTCTTT GTTCTAATAC ACTTCAACTC TTGGAATTTG GGTACTGGGA TCACTTCTCT 61 GATCTTCACG ACGAACCTGC AGGACGGACC GTCATAGCCA TGACGGGACC GTCGCAAGCT 120423 || ||||||| |||||||||| |||||||||| |||| | ||| ||| ||||| ||| |||||| GAACTTCACG ACGAACCTGC AGGACGGACC GTCAGATCCA CGAC-GGACC GTCACAAGCT 120 TCGTAATGCC ACACTTGGTC AGACTTCCCC ATCTTCCTTC AGCAGCTTCG CTACGCTGCC 120363 ||||||| || |||||| ||| ||||||||| |||||||||| ||||||| | ||||||| || TCGTAATCCC ACACTTAGTC AGACTTCCCT ATCTTCCTTC AGCAGCTGCA CTACGCTTCC 180 ACCTACGGAC CGTCACAGGC ACGACGGACC ATCATAAGCT CCGTAGGTGG TCTCTTCTGC 120303 |||||||||| ||||||| || |||||||||| ||||||||| |||||||||| | |||||||| ACCTACGGAC CGTCACAAGC ACGACGGACC GTCATAAGCT CCGTAGGTGG TTTCTTCTGC 240 A-TT-TTCGC TCAAAATCTC CGCATTCAGC TTTGGACAGA TTTCCTGCAA AACAAAGAGC 120245 | || ||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| ATTTCTTCGC TCAAAATCTC CGCATTCAGC TTTGGACAGA TTTCCTGCAA AACAAAGAGT 300 AATTTATATC AAAATTAGCA CAAAAAAGAC TTTCGGACAC ACTAAACTTA AGGAAAAAGT 120185 || |||||| |||||||||| | |||||| | ||| |||||| ||||| |||| |||||||||| AACTTATATA AAAATTAGCA C-AAAAAGGC TTTTGGACAC ACTAAGCTTA AGGAAAAAGT 359 ATTAATTATA CCGTGAAACC ACGGTATATC ACCTCTCTCA ATTTTTCTT 120136 |||||| ||| |||||||||| |||||||||| | | | |||| | || || ATTAATAATA CCGTGAAACC ACGGTATATC AACACCCTCA ACTTAAATT 408 hqPGS_C10HBa0115K16.1-_SGN-E578039+ (120541 120136) ******************************************************************************** EST sequence 177 +strand 800 n (File: SGN-E540293+) 1 GTCGCGAGGT CCGTCATGGT CACGACGGAC CGTCATGGAC TCCGTCGTCC CATACTTATG 61 CAATTTCTTT TGTTGCTCTT CTTCATTACC CTCAACGGCA AGTATGGCGG ACCGTCATAG 121 GCACAACGGT CCGTCGAGGG CCTTCGTTCC AAAACACTTT AACTCTTGGA ATATGGGTAC 181 TGGGATTACT TCTCTGAACT TCATGACGAA CCTGTAGGAC GGACCGTCAT AGACACGATG 241 GACCGTCACA AGCTTCGTAA CCCCATACTT GGTCAGACTT CCCCATCTTC CTTCAGCAGC 301 TGCACTACGC TGACACCTAC GGACCGTCAC AAGCACGACG GACCGTCATA AGCTCCGTAG 361 GTGGTCTCTT CTGCATTTCT TCGCTCAAAA TCTCCGCATT CAGCTTTGGA CAGATTTCCT 421 GCAAAATAAA AAGAAACTAA TATAGAAATT AGCACAAAAA GGATTTTAGA CACACTAAAC 481 TTAAGGAAAA AGTATTAATA ATACCATGAA ACCACGGTAT ATCACTTGGC CACCACTTCC 541 TTAACCCCTC AAAACTAAGT CCCCACCACG AGCCTTTCCA CGGCCAATAA TAGCTTTCAC 601 GAGCCGTGAA ATAGCTTGTG TGGAGGGGGC TATTTTGGGC AGATTTCACC TAGCCACAGC 661 CTAGCCCACC ACGATCTGTG GTCCTCAGCA TTGTCCATTA CGGTGGTCGT GAGAAGGTGG 721 GAAATGTCTG GGGAAAATTT GGCTGCCCTA GCCCTCTTCC TTGGCTCTAG ACCTCTCACA 781 TAGACTTAGT TTAGGCTACT Predicted gene structure (within gDNA segment 123670 to 116193): Exon 1 120657 120162 ( 496 n); cDNA 23 516 ( 494 n); score: 0.885 Intron 1 120161 117261 (2901 n); Pd: 0.979 (s: 0.92), Pa: 1.000 (s: 0) Exon 2 117260 117252 ( 9 n); cDNA 517 524 ( 8 n); score: 0.667 MATCH C10HBa0115K16.1- SGN-E540293+ 0.885 505 0.631 C PGS_C10HBa0115K16.1-_SGN-E540293+ (120657 120162,117260 117252) Alignment (genomic DNA sequence = upper lines): CGACGGACCG TCGTGGACTC CGTCGTCCCA TACTTGGTGC AATTTTCTTC TGTTGCT-TT 120599 |||||||||| || ||||||| |||||||||| ||||| ||| || |||||| ||||||| || CGACGGACCG TCATGGACTC CGTCGTCCCA TACTT-ATGC AA-TTTCTTT TGTTGCTCTT 80 CTTCATTCCC CTCGACGGCA AGTGTGACGG ACCGTCATTA GGCACAACGG TCCGTCAGAG 120539 ||||||| || ||| |||||| ||| || ||| |||||||| | |||||||||| |||||| ||| CTTCATTACC CTCAACGGCA AGTATGGCGG ACCGTCAT-A GGCACAACGG TCCGTC-GAG 138 GGTC-TCGTT TCAAAATACT TCAACTCTTG AAATCTGGGT ACTGGGATCA CTTCTCTGAT 120480 || | ||||| ||||| ||| | |||||||| ||| ||||| |||||||| | ||||||||| GGCCTTCGTT CCAAAACACT TTAACTCTTG GAATATGGGT ACTGGGATTA CTTCTCTGAA 198 CTTCACGACG AACCTGCAGG ACGGACCGTC ATAGCCATGA CGGGACCGTC GCAAGCTTCG 120420 ||||| |||| |||||| ||| |||||||||| |||| || || |||||||| ||||||||| CTTCATGACG AACCTGTAGG ACGGACCGTC ATAGACACGA -TGGACCGTC ACAAGCTTCG 257 TAATGCCACA CTTGGTCAGA CTTCCCCATC TTCCTTCAGC AGCTTCGCTA CGCTGCCACC 120360 ||| ||| | |||||||||| |||||||||| |||||||||| |||| | ||| ||||| |||| TAACCCCATA CTTGGTCAGA CTTCCCCATC TTCCTTCAGC AGCTGCACTA CGCTGACACC 317 TACGGACCGT CACAGGCACG ACGGACCATC ATAAGCTCCG TAGGTGGTCT CTTCTGCA-T 120301 |||||||||| |||| ||||| ||||||| || |||||||||| |||||||||| |||||||| | TACGGACCGT CACAAGCACG ACGGACCGTC ATAAGCTCCG TAGGTGGTCT CTTCTGCATT 377 T-TTCGCTCA AAATCTCCGC ATTCAGCTTT GGACAGATTT CCTGCAAAAC AAAGAGCAAT 120242 | |||||||| |||||||||| |||||||||| |||||||||| ||||||||| ||| || || TCTTCGCTCA AAATCTCCGC ATTCAGCTTT GGACAGATTT CCTGCAAAAT AAAAAGAAAC 437 TTATATCAAA ATTAGCACAA AAAAGACTTT CGGACACACT AAACTTAAGG AAAAAGTATT 120182 | |||| || |||||||||| ||| || ||| |||||||| |||||||||| |||||||||| TAATATAGAA ATTAGCACAA AAAGGA-TTT TAGACACACT AAACTTAAGG AAAAAGTATT 496 AATTATACCG TGAAACCACG GTATATCACC TCTCTCAATT TTTCTTGCCA TATATACAAA 120122 ||| ||||| |||||||||| AATAATACCA TGAAACCACG .......... .......... .......... .......... 516 TACATATGTA TAAAATATAA AATTATATAA CCAATATAAA TATACAATTC ACCTCTCTCT 120062 .......... .......... .......... .......... .......... .......... 516 CACTCTTTGT CCTATGTCGC TCTCCTCTCT CCTCTCTCGC AATCTCGCTT GCCTCTCTCC 120002 .......... .......... .......... .......... .......... .......... 516 TCTCTCTCGC AGTGTCGCTT GCCTCTCTCC TCTCTATAAC ATGTAGCTAT GAATTGAAAT 119942 .......... .......... .......... .......... .......... .......... 516 TATCAAACTA TAGCTATGGA TAGTAATAAT GATATTTTTG AGTCGCTATA TGTGAAAGTT 119882 .......... .......... .......... .......... .......... .......... 516 TCTTTCCAAA AAATGGTCAG TAAAGCCGAC AAGTACGTGG ACGAGCTTGT CGGATCAGTC 119822 .......... .......... .......... .......... .......... .......... 516 CTCTTTGCTT ATTTTTTTCG AATTAAATTA TAATCTAAAA ATAATATCAT AAATATCGAA 119762 .......... .......... .......... .......... .......... .......... 516 AAAATAATAT TATATGGCGT TAGTATTACT ACTTGTTAAT CAAATACACA AATAAAATTA 119702 .......... .......... .......... .......... .......... .......... 516 TTCTTATAAT ATTTTTATTG AGTTTGATTT CAAATAAAAG CATAAATAAC TTAATAGTAA 119642 .......... .......... .......... .......... .......... .......... 516 TATTAACCTA ATTGTTTTCC AATAATCATA ATAAAACACA AAAAATATGA CAATATTCCA 119582 .......... .......... .......... .......... .......... .......... 516 TAGGCTATGT AATATTTCAA ACTTTAAATA GATTTTGAGT TTAGACTCTT ATTATTTTTA 119522 .......... .......... .......... .......... .......... .......... 516 ATACTCTATT TTATTTTTAT TTTTTGATTA AATTTATTTG GCTCATGGGC CGTCCCTATC 119462 .......... .......... .......... .......... .......... .......... 516 CATATTTCTC AAGCTCCACA AATTGTTAGA CTTATTCAAA CCAGACTAAA AAGTCCTTTT 119402 .......... .......... .......... .......... .......... .......... 516 CTTAAATGAG ATCAAAAAAT CATTGTCCAA CCCTATCAAG TCACGGATTA GGCCAGCGCA 119342 .......... .......... .......... .......... .......... .......... 516 GCTTAACAGA CCTATCACAT ATTAACGACT ATAATTACAT AAACCAAAAG AAATGGTTAA 119282 .......... .......... .......... .......... .......... .......... 516 TTATAAACAC ATAGATAAGA ATTTTTTAGA AGTACAAAAC TTTATGATAA AACTTTTTAC 119222 .......... .......... .......... .......... .......... .......... 516 TTAAACAAGA AACATGATAA TTCACTGTTA CACTAAATAG TGGTGAGCTG GTCACTAATA 119162 .......... .......... .......... .......... .......... .......... 516 ACTTAAACAA TACAGAAAAT ATAAAATATA AGTAGATAGA TCAAATATGA GCTCTAAACT 119102 .......... .......... .......... .......... .......... .......... 516 AATACTTGAA CTTTACTTTG TAATGTGAGT TCAAGGATTT GAGGTAACTA GTTTCAATGG 119042 .......... .......... .......... .......... .......... .......... 516 ACATACGTTG CACGTGAATA TTAAATCATG TACTAAACTA TTTTTAAAAT TAATGTCAAT 118982 .......... .......... .......... .......... .......... .......... 516 ATTATTAAAT TAAAAAACAA ACAATTATAC GTGGAATGAT AATGTATATG TTTTTATGAA 118922 .......... .......... .......... .......... .......... .......... 516 TAGTGGATGT AAACTTTCTT TTGATTACTA TTGAAAGTTG TCAAATCAAC ATCCAAAAAT 118862 .......... .......... .......... .......... .......... .......... 516 ACATATGACT ATTTTTAATA TAAAATTTGA TATAGATAAG GTGATTTGAC ACTACCCTAT 118802 .......... .......... .......... .......... .......... .......... 516 GACCTTTAAT TAAGTTTATC TTTTTTTTGA ATCTTTTCTT CATTTTATAA TTAATTGTAA 118742 .......... .......... .......... .......... .......... .......... 516 TACGTAAAAA GAAAAAGTCA CTCTTAAAAT CTCTTCGTTA TCCCTTTTAA ATATGTTTCC 118682 .......... .......... .......... .......... .......... .......... 516 TCCTTCTTTT CATATAGTAT ATCACTTAGT TATTATTGTA TTATTGGAGT TCTTACTTTT 118622 .......... .......... .......... .......... .......... .......... 516 AATATATAGT ACAATCTACA TAAATATTAG TATGAAATAT AGAAGATATA CTAAATTGGA 118562 .......... .......... .......... .......... .......... .......... 516 TGTTTTTAAT TGGAATATTA TATTAATTTA ATATTCATGT CAGGGAGTGT TTAATTGAAT 118502 .......... .......... .......... .......... .......... .......... 516 ACTTTGAGAT TCACAACGTC TTTAAATCAC ACATGAAATT TTAACAAGAT AAAGAATAGA 118442 .......... .......... .......... .......... .......... .......... 516 AAACATAAAA AAATATAGTT TAAAATGTGA GGGAACTCCT CCATTTAAAG TTAACAAATA 118382 .......... .......... .......... .......... .......... .......... 516 GTAGTATGAC CATTTGCATA TTGCGCCTTA TGATAAAACT CACAACCCTT CGAAAAAGAT 118322 .......... .......... .......... .......... .......... .......... 516 CACCACTCAT CGAAATGTCT CAACTCTTTG AAAAAGTCTT AAGCATTCAT TGTGAAGAGG 118262 .......... .......... .......... .......... .......... .......... 516 CCTTATTTTA TTATAATTTA GTATAAATAT AATATAAAAT ATAGAAGATG TACCGAATTA 118202 .......... .......... .......... .......... .......... .......... 516 TGTGTTTTAA GAAGAAGAAC AATAAAAAAA CTTTTAAATG TTGTAGTTTA AAATGTGAGG 118142 .......... .......... .......... .......... .......... .......... 516 AAACCCCTCT TTTAAAAGCC AAAAAAGGGT AGTGTCTGAA AAAATGTTTA TTGTGCCTTA 118082 .......... .......... .......... .......... .......... .......... 516 TTAGAAAAAT CACAATTCTT CAAAAGTGTC GCAACTCATT GGAAAACTCA CAATTCTTGA 118022 .......... .......... .......... .......... .......... .......... 516 GTGTGATAAC TTATTTTTAA TGTTATAAGT AAGATCCCGT TAAATTCAAA ACTTATAATA 117962 .......... .......... .......... .......... .......... .......... 516 AAAACAATAA AATGAGGTTC TAGCTAGGAT CAAACCCTAA TCATGCAGGT GTATGTGTTT 117902 .......... .......... .......... .......... .......... .......... 516 GCTTGTACTA GTGGTATCAA GCGCCCTTCT AGTTTTTCAT GGGCCACTAT TCGTAATATT 117842 .......... .......... .......... .......... .......... .......... 516 GAGTTTTTTC TAGTTTCTCA AGATATTCTT GGTTTGAGAC CCCGACATAC CTTTTTTTAG 117782 .......... .......... .......... .......... .......... .......... 516 CCGGGTTCGA GGCCTTGGCG TATATCCTTA GTTATACTTT GAGGCCCTAA CTCGTCCTTT 117722 .......... .......... .......... .......... .......... .......... 516 ACCCTCAATT CATGTCCGTT CACACCTCTA TTAGTCGTGT TCGAGTTCAA ACTCTACAAT 117662 .......... .......... .......... .......... .......... .......... 516 TCTTTGTGGT TTTTGTTTTG GCTTTACCAC AATTTGAATT CGTAGAAGGC TAAGGAAATT 117602 .......... .......... .......... .......... .......... .......... 516 CTGAAAGTGT TCTGTAGTTT TTGTAGTAGT TCCTTATCAC TTATGTGTAT CCATCATGTT 117542 .......... .......... .......... .......... .......... .......... 516 TATGGGGTCC GTTTGGATTT ACTTTAAATT ATGTATGAAA TGTACCGTTT TTGATTGTAG 117482 .......... .......... .......... .......... .......... .......... 516 GGTCTAGTTA GGTTTAGCTA GCTTTATGGT TCCTTTTTTC CTTAGCCCGT GCTCCTCTTA 117422 .......... .......... .......... .......... .......... .......... 516 GTTAGGATTT TGTTATTATT TTCATTTTAT GGTTTCGAGT TGTTTCCGTT TCCAATTTTC 117362 .......... .......... .......... .......... .......... .......... 516 ATTATTTCTT TCACTTTCCA AGCTCATTCG ACCTATGATG CTACTAGGTA CATATTATTT 117302 .......... .......... .......... .......... .......... .......... 516 TGATAGTCAT ACTACACTAT AAATCTGTTT ATCTGATGTA GGTACGAGCA 117252 ||| | || .......... .......... .......... .......... .GTA-TATCA 524 hqPGS_C10HBa0115K16.1-_SGN-E540293+ (120657 120162) ******************************************************************************** EST sequence 191 +strand 534 n (File: SGN-E286708+) 1 TCGCGAGGTC CGTCATGGTC ACGACGGACC GTCATGGACT CCGTCGTCCC ATACTTATGC 61 AATTTCTTTT GTTGCTCTTC TTCATTACCC TCAACGGCAA GTATGGCGGA CCGTCATAGG 121 CACAACGGTC CGTCGAGGGC CTTCGTTCCA AAACACTTTA ACTCTTGGAA TATGGGTACT 181 GGGATTACTT CTCTGAACTT CATGACGAAC CTGTAGGACG GACCGTCATA GACACGATGG 241 ACCGTCACAA GCTTCGTAAC CCCATACTTG GTCAGACTTC CCCATCTTCC TTCAGCAGCT 301 GCACTACGCT GACACCTACG GACCGTCACA AGCACGACGG ACCGTCATAA GCTCCGTAGG 361 TGGTCTCTTC TGCATTTCTT CGCTCAAAAT CTCCGCATTC AGCTTTGGAC AGATTTCCTG 421 CAAAATAAAA AGAAACTAAT ATAGAAATTA GCACAAAAAG GATTTTAGAC ACACTAAACT 481 TAAGGAAAAA GTATTAATAA TACCATGAAA CCACGGTATA TCACTTGGCC ACCA Predicted gene structure (within gDNA segment 123660 to 119443): Exon 1 120657 120162 ( 496 n); cDNA 22 515 ( 494 n); score: 0.885 MATCH C10HBa0115K16.1- SGN-E286708+ 0.885 496 0.929 C PGS_C10HBa0115K16.1-_SGN-E286708+ (120657 120162) Alignment (genomic DNA sequence = upper lines): CGACGGACCG TCGTGGACTC CGTCGTCCCA TACTTGGTGC AATTTTCTTC TGTTGCT-TT 120599 |||||||||| || ||||||| |||||||||| ||||| ||| || |||||| ||||||| || CGACGGACCG TCATGGACTC CGTCGTCCCA TACTT-ATGC AA-TTTCTTT TGTTGCTCTT 79 CTTCATTCCC CTCGACGGCA AGTGTGACGG ACCGTCATTA GGCACAACGG TCCGTCAGAG 120539 ||||||| || ||| |||||| ||| || ||| ||||||| || |||||||||| |||||| ||| CTTCATTACC CTCAACGGCA AGTATGGCGG ACCGTCA-TA GGCACAACGG TCCGTC-GAG 137 GGTC-TCGTT TCAAAATACT TCAACTCTTG AAATCTGGGT ACTGGGATCA CTTCTCTGAT 120480 || | ||||| ||||| ||| | |||||||| ||| ||||| |||||||| | ||||||||| GGCCTTCGTT CCAAAACACT TTAACTCTTG GAATATGGGT ACTGGGATTA CTTCTCTGAA 197 CTTCACGACG AACCTGCAGG ACGGACCGTC ATAGCCATGA CGGGACCGTC GCAAGCTTCG 120420 ||||| |||| |||||| ||| |||||||||| |||| || || |||||||| ||||||||| CTTCATGACG AACCTGTAGG ACGGACCGTC ATAGACACGA -TGGACCGTC ACAAGCTTCG 256 TAATGCCACA CTTGGTCAGA CTTCCCCATC TTCCTTCAGC AGCTTCGCTA CGCTGCCACC 120360 ||| ||| | |||||||||| |||||||||| |||||||||| |||| | ||| ||||| |||| TAACCCCATA CTTGGTCAGA CTTCCCCATC TTCCTTCAGC AGCTGCACTA CGCTGACACC 316 TACGGACCGT CACAGGCACG ACGGACCATC ATAAGCTCCG TAGGTGGTCT CTTCTGCA-T 120301 |||||||||| |||| ||||| ||||||| || |||||||||| |||||||||| |||||||| | TACGGACCGT CACAAGCACG ACGGACCGTC ATAAGCTCCG TAGGTGGTCT CTTCTGCATT 376 T-TTCGCTCA AAATCTCCGC ATTCAGCTTT GGACAGATTT CCTGCAAAAC AAAGAGCAAT 120242 | |||||||| |||||||||| |||||||||| |||||||||| ||||||||| ||| || || TCTTCGCTCA AAATCTCCGC ATTCAGCTTT GGACAGATTT CCTGCAAAAT AAAAAGAAAC 436 TTATATCAAA ATTAGCACAA AAAAGACTTT CGGACACACT AAACTTAAGG AAAAAGTATT 120182 | |||| || |||||||||| ||| || ||| |||||||| |||||||||| |||||||||| TAATATAGAA ATTAGCACAA AAAGGA-TTT TAGACACACT AAACTTAAGG AAAAAGTATT 495 AATTATACCG TGAAACCACG 120162 ||| ||||| |||||||||| AATAATACCA TGAAACCACG 515 hqPGS_C10HBa0115K16.1-_SGN-E286708+ (120657 120162) ******************************************************************************** EST sequence 25 -strand 680 n (File: SGN-E346859-) 1 TGCCAAAACG CGGCTGGGTC GACGGACCAC GCGACAGAAC GTCGTGGTCA TGACGGACCG 61 TCATGGGCTC CGTCGCCCCA TACTTGGGTG CAATTCTTCT GCTGCTTTCT TCATTCCCCT 121 CGACGGCAAG TGTGACGGAC CGTCACAGGC ACGACGGTCC GTCGAGGGTC TTCGTTACAA 181 AATACTTCAA CTTTTGGAAT TTGGGTACTG GGATCACTTC TCTGATCTTC GCGACGAACC 241 TGCAGGACGG ACCGTCATAT CCATGACGGA CCGTCACAAG CTTCGTAATC CCACACTTGG 301 TCAGACTTCC CCATCTTCCT TCAGCAGCTT CTCTACGCTG CCACCTACGG ACCGTCACAA 361 GCACGACGGA CCGTCATAAG CTCCGTAGGT GGTCTCTTCT GCATTTATCG CTCAAAATCT 421 CCGCATTCAG CTTTAGACAG ATTTCCTGCA AAACAAAGAA AAACTTATAT CAAAATTAGC 481 ACAAAAAGGG CTTTCGGACA CACTAAACTT AAGGAAAAAG TATTAATTAT ACCGTGAAAC 541 CACGGTATAT CAATCCCCTA GTTCTACGTG TCAGTTCGTG ATACCCGATC CCCTAATTCT 601 ACGTGTCGGT TCATGACACC CGCTCCACTA ATCTTATTCT GTCAATCGAT CAAGCCTTCT 661 TTTATACCAA GGCATATCAA Predicted gene structure (within gDNA segment 121298 to 118274): Exon 1 120653 120162 ( 492 n); cDNA 55 544 ( 490 n); score: 0.928 MATCH C10HBa0115K16.1- SGN-E346859- 0.928 492 0.724 C PGS_C10HBa0115K16.1-_SGN-E346859- (120653 120162) Alignment (genomic DNA sequence = upper lines): GGACCGTCGT GGACTCCGTC GTCCCATACT TG-GTGCAAT TTTCTTCTGT TGCTTTCTTC 120595 |||||||| | || ||||||| | |||||||| || |||||| |||||||| |||||||||| GGACCGTCAT GGGCTCCGTC GCCCCATACT TGGGTGCAA- -TTCTTCTGC TGCTTTCTTC 112 ATTCCCCTCG ACGGCAAGTG TGACGGACCG TCATTAGGCA CAACGGTCCG TCAGAGGGTC 120535 |||||||||| |||||||||| |||||||||| ||| ||||| | |||||||| || ||||||| ATTCCCCTCG ACGGCAAGTG TGACGGACCG TCA-CAGGCA CGACGGTCCG TC-GAGGGTC 170 -TCGTTTCAA AATACTTCAA CTCTTGAAAT CTGGGTACTG GGATCACTTC TCTGATCTTC 120476 ||||| ||| |||||||||| || ||| ||| ||||||||| |||||||||| |||||||||| TTCGTTACAA AATACTTCAA CTTTTGGAAT TTGGGTACTG GGATCACTTC TCTGATCTTC 230 ACGACGAACC TGCAGGACGG ACCGTCATAG CCATGACGGG ACCGTCGCAA GCTTCGTAAT 120416 ||||||||| |||||||||| ||||||||| ||||||| || |||||| ||| |||||||||| GCGACGAACC TGCAGGACGG ACCGTCATAT CCATGAC-GG ACCGTCACAA GCTTCGTAAT 289 GCCACACTTG GTCAGACTTC CCCATCTTCC TTCAGCAGCT TCGCTACGCT GCCACCTACG 120356 ||||||||| |||||||||| |||||||||| |||||||||| || ||||||| |||||||||| CCCACACTTG GTCAGACTTC CCCATCTTCC TTCAGCAGCT TCTCTACGCT GCCACCTACG 349 GACCGTCACA GGCACGACGG ACCATCATAA GCTCCGTAGG TGGTCTCTTC TGCATTT-TC 120297 |||||||||| ||||||||| ||| |||||| |||||||||| |||||||||| ||||||| || GACCGTCACA AGCACGACGG ACCGTCATAA GCTCCGTAGG TGGTCTCTTC TGCATTTATC 409 GCTCAAAATC TCCGCATTCA GCTTTGGACA GATTTCCTGC AAAACAAAGA GCAATTTATA 120237 |||||||||| |||||||||| ||||| |||| |||||||||| |||||||||| || ||||| GCTCAAAATC TCCGCATTCA GCTTTAGACA GATTTCCTGC AAAACAAAGA AAAACTTATA 469 TCAAAATTAG CACAAAAAAG ACTTTCGGAC ACACTAAACT TAAGGAAAAA GTATTAATTA 120177 |||||||||| |||||||| | ||||||||| |||||||||| |||||||||| |||||||||| TCAAAATTAG CACAAAAAGG GCTTTCGGAC ACACTAAACT TAAGGAAAAA GTATTAATTA 529 TACCGTGAAA CCACG 120162 |||||||||| ||||| TACCGTGAAA CCACG 544 hqPGS_C10HBa0115K16.1-_SGN-E346859- (120653 120162) ******************************************************************************** EST sequence 111 +strand 411 n (File: SGN-E577891+) 1 TTCGTTTCAA AATACTTCAG CTCTTGGAAT CTGGGTACTG GAATCACTTC TCTGATCTTC 61 ACGACGAACC TGCAGGACGG ACCGTCATAG CCATGACGGA CCGTCACAAT CTTCGTAATC 121 CCACACTTGG TGAGACTTCC CCATCTTCCT TCAGCAGCTT CTCTACGCTG CCACCTACGG 181 AGCGTCAAAG GCACGATGGA CCGTCATAAG CTCAGTAGGT GGTCTCTTCT ACATTTTTTC 241 GCTCAAAATC TCTGCTTTCA GCTTTGGACA GATTTCCTGC AAAATAAAGA GAAACTTATA 301 CCAAAATTAG CACAAAAAGG CTTACGGACA CACTAAACTT AAGGCAAAAG TATTAATTAT 361 ACCGTGAAAC CACGGTATAT CAGGGACATG AACTCGAAGG CCATTGTTGG C Predicted gene structure (within gDNA segment 121513 to 119254): Exon 1 120534 120162 ( 373 n); cDNA 2 374 ( 373 n); score: 0.920 MATCH C10HBa0115K16.1- SGN-E577891+ 0.920 373 0.908 C PGS_C10HBa0115K16.1-_SGN-E577891+ (120534 120162) Alignment (genomic DNA sequence = upper lines): TCGTTTCAAA ATACTTCAAC TCTTGAAATC TGGGTACTGG GATCACTTCT CTGATCTTCA 120475 |||||||||| |||||||| | ||||| |||| |||||||||| ||||||||| |||||||||| TCGTTTCAAA ATACTTCAGC TCTTGGAATC TGGGTACTGG AATCACTTCT CTGATCTTCA 61 CGACGAACCT GCAGGACGGA CCGTCATAGC CATGACGGGA CCGTCGCAAG CTTCGTAATG 120415 |||||||||| |||||||||| |||||||||| |||||| ||| ||||| ||| ||||||||| CGACGAACCT GCAGGACGGA CCGTCATAGC CATGAC-GGA CCGTCACAAT CTTCGTAATC 120 CCACACTTGG TCAGACTTCC CCATCTTCCT TCAGCAGCTT CGCTACGCTG CCACCTACGG 120355 |||||||||| | |||||||| |||||||||| |||||||||| | |||||||| |||||||||| CCACACTTGG TGAGACTTCC CCATCTTCCT TCAGCAGCTT CTCTACGCTG CCACCTACGG 180 ACCGTCACAG GCACGACGGA CCATCATAAG CTCCGTAGGT GGTCTCTTCT GCA--TTTTC 120297 | ||||| || |||||| ||| || ||||||| ||| |||||| |||||||||| || ||||| AGCGTCAAAG GCACGATGGA CCGTCATAAG CTCAGTAGGT GGTCTCTTCT ACATTTTTTC 240 GCTCAAAATC TCCGCATTCA GCTTTGGACA GATTTCCTGC AAAACAAAGA GCAATTTATA 120237 |||||||||| || || |||| |||||||||| |||||||||| |||| ||||| | || ||||| GCTCAAAATC TCTGCTTTCA GCTTTGGACA GATTTCCTGC AAAATAAAGA GAAACTTATA 300 TCAAAATTAG CACAAAAAAG ACTTTCGGAC ACACTAAACT TAAGGAAAAA GTATTAATTA 120177 ||||||||| ||| |||||| ||| ||||| |||||||||| ||||| |||| |||||||||| CCAAAATTAG CAC-AAAAAG GCTTACGGAC ACACTAAACT TAAGGCAAAA GTATTAATTA 359 TACCGTGAAA CCACG 120162 |||||||||| ||||| TACCGTGAAA CCACG 374 hqPGS_C10HBa0115K16.1-_SGN-E577891+ (120534 120162) ******************************************************************************** EST sequence 198 +strand 522 n (File: SGN-E243969+) 1 GGAAATCTGC CAAAACGCGG CTTGGTCGAC GGACCACGCG ACGGACCGTC GTGGACTCTG 61 TCGTCCCATA CTTGGTGCAA TTTCTTCTGC TGCTTTCTTC ATTCCCCTCG ACGGCAAGTG 121 TAACGGACCG TCATAGGTAC AACGGTCTGT CGAGGGTCTT CGTTTCAAAA TACTTCAACT 181 CTTGGAATCT GGGTACTGGG ATCACTTCTC TGATCTTCAC GACGAACCTG CAGGACGGAC 241 CGTCATAGCC ATGACGGACC GTCACAAGCT TCGTAATCCC ACACTTGGTC AGACTTCCCC 301 ATCTTCCTTC AGCAGCTTCT CTACGCTACC ACCTACGGAC CGTCACAAGC ACGACAGACC 361 TTCAAAAGCT CCGTAGGTGG TCTCTTCTGC ATTTTTTTGC TCAAAATCTC CGCTTTCAGC 421 TTTTGACAGA TTTCCTGCAA AACAAAGAGA AACTTATATC AAAATTAGCA CAAAAAAGGC 481 TTTCGGACAC TTTAAACTTA AGGCAAAAGT ATTAATTATA CC Predicted gene structure (within gDNA segment 121295 to 118418): Exon 1 120695 120173 ( 523 n); cDNA 1 522 ( 522 n); score: 0.932 MATCH C10HBa0115K16.1- SGN-E243969+ 0.932 523 1.002 C PGS_C10HBa0115K16.1-_SGN-E243969+ (120695 120173) Alignment (genomic DNA sequence = upper lines): GGAAATCTGC CAAAACGCGG CTGGGTCGAC GGACCACGCG ACGGACCGTC GTGGACTCCG 120636 |||||||||| |||||||||| || ||||||| |||||||||| |||||||||| |||||||| | GGAAATCTGC CAAAACGCGG CTTGGTCGAC GGACCACGCG ACGGACCGTC GTGGACTCTG 60 TCGTCCCATA CTTGGTGCAA TTTTCTTCTG TTGCTTTCTT CATTCCCCTC GACGGCAAGT 120576 |||||||||| |||||||||| ||||||||| ||||||||| |||||||||| |||||||||| TCGTCCCATA CTTGGTGCAA -TTTCTTCTG CTGCTTTCTT CATTCCCCTC GACGGCAAGT 119 GTGACGGACC GTCATTAGGC ACAACGGTCC GTCAGAGGGT C-TCGTTTCA AAATACTTCA 120517 || ||||||| |||| |||| ||||||||| ||| |||||| | |||||||| |||||||||| GTAACGGACC GTCA-TAGGT ACAACGGTCT GTC-GAGGGT CTTCGTTTCA AAATACTTCA 177 ACTCTTGAAA TCTGGGTACT GGGATCACTT CTCTGATCTT CACGACGAAC CTGCAGGACG 120457 ||||||| || |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACTCTTGGAA TCTGGGTACT GGGATCACTT CTCTGATCTT CACGACGAAC CTGCAGGACG 237 GACCGTCATA GCCATGACGG GACCGTCGCA AGCTTCGTAA TGCCACACTT GGTCAGACTT 120397 |||||||||| |||||||| | ||||||| || |||||||||| | |||||||| |||||||||| GACCGTCATA GCCATGAC-G GACCGTCACA AGCTTCGTAA TCCCACACTT GGTCAGACTT 296 CCCCATCTTC CTTCAGCAGC TTCGCTACGC TGCCACCTAC GGACCGTCAC AGGCACGACG 120337 |||||||||| |||||||||| ||| |||||| | |||||||| |||||||||| | ||||||| CCCCATCTTC CTTCAGCAGC TTCTCTACGC TACCACCTAC GGACCGTCAC AAGCACGACA 356 GACCATCATA AGCTCCGTAG GTGGTCTCTT CTGCA--TTT TCGCTCAAAA TCTCCGCATT 120279 |||| ||| | |||||||||| |||||||||| ||||| ||| | |||||||| ||||||| || GACCTTCAAA AGCTCCGTAG GTGGTCTCTT CTGCATTTTT TTGCTCAAAA TCTCCGCTTT 416 CAGCTTTGGA CAGATTTCCT GCAAAACAAA GAGCAATTTA TATCAAAATT AGCACAAAAA 120219 ||||||| || |||||||||| |||||||||| ||| || ||| |||||||||| |||||||||| CAGCTTTTGA CAGATTTCCT GCAAAACAAA GAGAAACTTA TATCAAAATT AGCACAAAAA 476 AGACTTTCGG ACACACTAAA CTTAAGGAAA AAGTATTAAT TATACC 120173 || ||||||| |||| |||| ||||||| || |||||||||| |||||| AGGCTTTCGG ACACTTTAAA CTTAAGGCAA AAGTATTAAT TATACC 522 hqPGS_C10HBa0115K16.1-_SGN-E243969+ (120695 120173) ******************************************************************************** EST sequence 100 -strand 787 n (File: SGN-E369291-) 1 TTTTTTTTTT TTTTTTTTTT TTTTAAAATT CAAAAAGTTT GGTTGATTAA TCACCAATAA 61 TCACTGCAAA GAATCTTAAA GTAATCAACA ATCTCACAAA AAGTGTAATG ATTCTCAAAA 121 GTCTAACAAT ACAGTGTCTA CTAATATGAT GTCTAACAAT ACGGAGTATA ACCTCAAAAA 181 CGAGGTTTTT CGAACTATTT ATAGAAAATA AAAACCTAAC TAAACAAGGA CTCTATTTGC 241 TGGAAATCTG CCAAAACGCG GCTGGGTCGA CAGAACTCAC GACGGATCGT CATGGTCACG 301 ATGGACCGTC ATGGACTCTG TCGTCCCATA CTTATGCAAT TTCTTTTGCT TCTCTCTTCA 361 TTACCCTCGA CGGCAGGTAT GACGGACCGT CATAGGCACA ACGGTCTATC GAGGGTCTTC 421 GTTTCAACAC ACTTGAACTC TTGGAATATG GGTACTGGGA CTACTTCTCT GAACTTCATG 481 ACGAACCTGC AGGACGGACC GTCATGAACT CCGTAGCCCC GCACTTGGTC AGACTTCCCC 541 ATCTTCTTTC AGCAGCTGCA CTACGCTGCC ACCTACAGAC CGTCACAAGC ACGACGGACC 601 GTCATAAGCT CTGTAGGTCG TCTATTCTGC ATTTCTTCAC TCAAAATCTC CGCATTCATC 661 TTTGGACAGA TTTCCTTAAA AAGTAAATCG CTTACTACTG AATGGAGATG CTTGGCGTCG 721 AAAACATTGA GAACATGACC ACCAGTATAT CTTTTTCGTG AGATAAACCT TGCACCATAC 781 GTCCATA Predicted gene structure (within gDNA segment 124297 to 118549): Exon 1 122629 122614 ( 16 n); cDNA 89 103 ( 15 n); score: 0.812 Intron 1 122613 120842 (1772 n); Pd: 0.552 (s: 0), Pa: 0.000 (s: 0.70) Exon 2 120841 120253 ( 589 n); cDNA 104 682 ( 579 n); score: 0.750 PPA cDNA 24 1 MATCH C10HBa0115K16.1- SGN-E369291- 0.750 605 0.769 C PGS_C10HBa0115K16.1-_SGN-E369291- (122629 122614,120841 120253) Alignment (genomic DNA sequence = upper lines): CAATCTCAGC ATAAGGGCAT TCTCCATAAG ATCCACCTGC TATAGTGTCC AACACTGCTT 122570 |||||||| | | || | CAATCTCA-C AAAAAG.... .......... .......... .......... .......... 103 TATTGTTATT ATCCTGTCCC CGATAGAAGT ATTCCTTCAG TGACTCATCA TCAATACGGT 122510 .......... .......... .......... .......... .......... .......... 103 GATTTGGAAC ACTTCTCAAG AATGACGTGA ATCTATCCCA AGAACTACTA ACTGACTCTC 122450 .......... .......... .......... .......... .......... .......... 103 CTGGTAGTGC CACAAAGTTA TTCACCCTGT CTTTGTGGTT TAATTTCTTG GAGACCGGAT 122390 .......... .......... .......... .......... .......... .......... 103 AGTAGCGTGC TAAGAAGACA TCCCGTAGTT GGTTCCAAGT GAAGATGGAG TTGTATGGGA 122330 .......... .......... .......... .......... .......... .......... 103 GCTCAGTAAA CCACATAGAA GCCTCTCCCG TCAGTGAGAG AGGAAACACT CTGAGACCTA 122270 .......... .......... .......... .......... .......... .......... 103 TTACATCTAG ATCCAAATCA GGCCTCCCCA CACAACTTTT ACACACTGCC CTAACCTTAG 122210 .......... .......... .......... .......... .......... .......... 103 CTATATGGGC ATGTGGATCC TCAGAAGGTA GCCCTGAAAA CAAACCTCTG GCAGTGAGCA 122150 .......... .......... .......... .......... .......... .......... 103 TTTGCATCAG GCTACTAGTT ACCACAAAAG TGTGGCCTGT GGGTAGAGGG GGCAAGACAA 122090 .......... .......... .......... .......... .......... .......... 103 GTGGCCCATC CGAGTCTGTG ATGTTATCAT ACCCTCTGTA GTATGCTTGG GGCCGTGGAA 122030 .......... .......... .......... .......... .......... .......... 103 TGGGATTTTG TCCCCTCTGT TGATGTTCAC CCAGAGCGTC GAGTACCATC TGACCATGAA 121970 .......... .......... .......... .......... .......... .......... 103 CATCCACTGG ATTTAGGATG TTCTGGTTTG GATCCTCATC ATTTATTCCC AAGTTTCGAT 121910 .......... .......... .......... .......... .......... .......... 103 TCATATTGCG CAGTGTACGC TCTAGCTCGT GATCGTTGGG AAAAAAGGGT TCTCTTCCTC 121850 .......... .......... .......... .......... .......... .......... 103 TCCGTGTATT TGGCATACAA GGAGGATAGT TCTGAAAGGA AATAAAAAAC AATAAAACAA 121790 .......... .......... .......... .......... .......... .......... 103 AGTAAAATCA AGAAAATATC AACTAAACTT TAGTAATAAG TTTAAGTTAA TCTAAAAGCT 121730 .......... .......... .......... .......... .......... .......... 103 AAATTCCCCG GCAGCGGCGC CAAAATTTGA TACGCTCAAA CTTACTTCTC AAATGAGAAG 121670 .......... .......... .......... .......... .......... .......... 103 TAAAGCGGTC GCGTCAAGTA AATAACCCAA CTAGTGAGGT TGGGATCGTT CCCACGAGGA 121610 .......... .......... .......... .......... .......... .......... 103 AAATAGTCTA GACTTACCTT CAACTTGTTA TTACTATTGT TCGGTTGATG ATTTCCTTAG 121550 .......... .......... .......... .......... .......... .......... 103 AAAGTAAAAA CATAAAAAGG GGGTTTTGTA TTTCCTAATG AGTAAAAATA ACTAACGGAC 121490 .......... .......... .......... .......... .......... .......... 103 TTGAAAGAGA CACTTAACAA CTTTTAATGT TGGGTTTTAA TCAATTAATC AAAGTAACTA 121430 .......... .......... .......... .......... .......... .......... 103 GGGTTTACGT GTTCCCCACA GGTTCATAAC TTGATAATTC TAACTATAAC AATTCTTTCC 121370 .......... .......... .......... .......... .......... .......... 103 TAGTATCTTG CATGCAAAGT GATAAATTAT GTATTTCTAA ATCCTTGGTC CGGCATCTAG 121310 .......... .......... .......... .......... .......... .......... 103 AAAATCTCAC TCCGCACCTT GGTCTGGCTG CGTGTGTTGC TTTCCTAACC CTTATCTTTA 121250 .......... .......... .......... .......... .......... .......... 103 CCTCATATTA AGCATCGTAT TCGATATTTG ACTAAGTTAT TACCTCGTAC CAATCAATAC 121190 .......... .......... .......... .......... .......... .......... 103 TAGCCTATTA GATAGCATAC ACTAAATCTA TGTTAATACT TCTTTTCCTA TTATCTACCT 121130 .......... .......... .......... .......... .......... .......... 103 CCTTGGTCCG ACAAGTAGCA TTAAGGCGAG TTCTAACGTT GATCATCCGT TAAAAAGACT 121070 .......... .......... .......... .......... .......... .......... 103 TCTAAGCGAA AGAATTATTA ATACATACAA GACACTATTC TAGAATTGTT CTTTTAGCTA 121010 .......... .......... .......... .......... .......... .......... 103 GGGTTTATCT CATTATTTGC CTATGGTTCC CACAACCCTA GTTATGGATT TTAGTTCCTC 120950 .......... .......... .......... .......... .......... .......... 103 ATAGCCATAA ACACAATATT CAAATATATT AAATAAGAAT TCATCTACTT AATTCAATGA 120890 .......... .......... .......... .......... .......... .......... 103 GAAAGAGTAA AGTCCGAAAA ATTGCTTGAT TAATTACCAA AAATCACTTG TAAGAATCTC 120830 || ||| || || .......... .......... .......... .......... ........TG TAATGAT-TC 114 CAAAAAATCA AACACTAATA AACAAAGTCT AATAATATGA TGTCTAATCT CCCAGAGTCT 120770 |||| || | || |||| || |||| | |||||||| ||||||| | |||| | TCAAAAGTCT A--AC-AATA --CAGTGTCT ACTAATATGA TGTCTAACAA TACGGAGTAT 169 AACCTCAAAA ATGAGGTTTT TCGAACTATT TATAAAAAAA TAAAAACCTA ATTAAAGAAG 120710 |||||||||| | |||||||| |||||||||| ||| | |||| |||||||||| | |||| ||| AACCTCAAAA ACGAGGTTTT TCGAACTATT TAT-AGAAAA TAAAAACCTA ACTAAACAAG 228 GATTCTAAAT TACTGGAAAT CTGCCAAAAC GCGGCTGGGT CGACGGACCA CGCGACGGAC 120650 || ||| | | | |||||||| |||||||||| |||||||||| |||| || | | ||||||| GACTCT-ATT TGCTGGAAAT CTGCCAAAAC GCGGCTGGGT CGACAGAACT CACGACGGAT 287 CGTCGTGGAC TCCGTCGTCC --CAT--ACT -TG--GT-GC A-A-TT-TTC ---TTCTGTT 120604 |||| ||| | | | | || ||| ||| || || | | | || | | |||| || CGTCATGGTC ACGATGGACC GTCATGGACT CTGTCGTCCC ATACTTATGC AATTTCTTTT 347 GC-T-T-TCT TCATTCCCCT CGACGGCAAG TGTGACGGAC CGTCATTAGG CACAACGGTC 120547 || | | ||| ||||| |||| |||||||| | | |||||||| ||||| |||| |||||||||| GCTTCTCTCT TCATTACCCT CGACGGCAGG TATGACGGAC CGTCA-TAGG CACAACGGTC 406 CGTCAGAGGG TC-TCGTTTC AAAATACTTC AACTCTTGAA ATCTGGGTAC TGGGATCACT 120488 || ||||| || ||||||| || | |||| |||||||| | || ||||||| ||||| ||| TATC-GAGGG TCTTCGTTTC AACACACTTG AACTCTTGGA ATATGGGTAC TGGGACTACT 465 TCTCTGATCT TCACGACGAA CCTGCAGGAC GGACCGTCAT AGCCATGACG GGACCGTCGC 120428 ||||||| || ||| |||||| |||||||||| |||||||||| | | || |||| TCTCTGAACT TCATGACGAA CCTGCAGGAC GGACCGTCAT -G--A--AC- --TCCGT--- 514 AAGCTTCGTA ATGCCACACT TGGTCAGACT TCCCCATCTT CCTTCAGCAG CTTCGCTACG 120368 ||| | || |||| |||||||||| |||||||||| | |||||||| || | ||||| -AGC--C--- ---CCGCACT TGGTCAGACT TCCCCATCTT CTTTCAGCAG CTGCACTACG 565 CTGCCACCTA CGGACCGTCA CAGGCACGAC GGACCATCAT AAGCTCCGTA GGTGGTCTCT 120308 |||||||||| | |||||||| || ||||||| ||||| |||| |||||| ||| ||| |||| | CTGCCACCTA CAGACCGTCA CAAGCACGAC GGACCGTCAT AAGCTCTGTA GGTCGTCTAT 625 TCTGCA-TT- TTCGCTCAAA ATCTCCGCAT TCAGCTTTGG ACAGATTTCC TGCAAAA 120253 |||||| || ||| |||||| |||||||||| ||| |||||| |||||||||| | |||| TCTGCATTTC TTCACTCAAA ATCTCCGCAT TCATCTTTGG ACAGATTTCC TTAAAAA 682 hqPGS_C10HBa0115K16.1-_SGN-E369291- (120841 120253) ******************************************************************************** EST sequence 8 -strand 731 n (File: SGN-E261921-) 1 AATATCACTG CAAAAGATCT TAAAGTAATC ACCAATCTCA CAAAAAGTGT AATGATTCTC 61 AAAAGTCTAA CAATACAGTG TCTACTAATA TGATGTCTAA CAATACGGAG TATAACCTCA 121 AAAACGAGGT TTTTCGAACT ATTTATAGAA AATAAAAACC TAACTAAACA AGGACTCTAT 181 TTGCTGGAAA TCTGCCAAAA CGCGGCTGGG TCGACAGAAC TCACGACGGA TCGTCATGGT 241 CACGATGGAC CGTCATGGAC TCTGTCGTCC CATACTTATG CAATTTCTTT TGCTTCTCTC 301 TTCATTACCC TCGACGGCAG GTATGACGGA CCGTCATAGG CACAACGGTC TATCGAGGGT 361 CTTCGTTTCA ACACACTTGA ACTCTTGGAA TATGGGTACT GGGACTACTT CTCTGAACTT 421 CATGACGAAC CTGCAGGACG GACCGTCATG AACTCCGTAG CCCCGCACTT GGTCAGACTT 481 CCCCATCTTC TTTCAGCAGC TGCACTACGC TGCCACCTAC AGACCGTCAC AAGCACGACG 541 GACCGTCATA AGCTCTGTAG GTCGTCTATT CTGCATTTCT TCACTCAAAA TCTCCGCATT 601 CATCTTTGGA CAGATTTCCT TAAAAAGTAA ATCGCTTACT ACTGAATGGA GATGCTTGGC 661 GTCGAAAACA TTGAGAACAT GACCACCAGT ATATCTTTTT CGTGAGATAA ACCTTGCACC 721 ATACGTCCAT A Predicted gene structure (within gDNA segment 123137 to 118549): Exon 1 120802 120253 ( 550 n); cDNA 81 626 ( 546 n); score: 0.758 MATCH C10HBa0115K16.1- SGN-E261921- 0.758 550 0.752 C PGS_C10HBa0115K16.1-_SGN-E261921- (120802 120253) Alignment (genomic DNA sequence = upper lines): TCTAATAATA TGATGTCTAA TCTCCCAGAG TCTAACCTCA AAAATGAGGT TTTTCGAACT 120743 |||| ||||| |||||||||| | ||| | |||||||| |||| ||||| |||||||||| TCTACTAATA TGATGTCTAA CAATACGGAG TATAACCTCA AAAACGAGGT TTTTCGAACT 140 ATTTATAAAA AAATAAAAAC CTAATTAAAG AAGGATTCTA AATTACTGGA AATCTGCCAA 120683 |||||| | | |||||||||| |||| |||| ||||| ||| | || ||||| |||||||||| ATTTAT-AGA AAATAAAAAC CTAACTAAAC AAGGACTCT- ATTTGCTGGA AATCTGCCAA 198 AACGCGGCTG GGTCGACGGA CCACGCGACG GACCGTCGTG GACTCCGTCG TCC--CAT-- 120627 |||||||||| ||||||| || | | ||||| || |||| || | | | | | || ||| AACGCGGCTG GGTCGACAGA ACTCACGACG GATCGTCATG GTCACGATGG ACCGTCATGG 258 ACT-TG--GT -GCA-A-TT- TTC---TTCT GTTGC-T-T- TCTTCATTCC CCTCGACGGC 120580 ||| || || || | || | | |||| |||| | | |||||||| | |||||||||| ACTCTGTCGT CCCATACTTA TGCAATTTCT TTTGCTTCTC TCTTCATTAC CCTCGACGGC 318 AAGTGTGACG GACCGTCATT AGGCACAACG GTCCGTCAGA GGGTC-TCGT TTCAAAATAC 120521 | || ||||| |||||||| | |||||||||| ||| || || ||||| |||| ||||| | || AGGTATGACG GACCGTCA-T AGGCACAACG GTCTATC-GA GGGTCTTCGT TTCAACACAC 376 TTCAACTCTT GAAATCTGGG TACTGGGATC ACTTCTCTGA TCTTCACGAC GAACCTGCAG 120461 || ||||||| | ||| |||| |||||||| |||||||||| ||||| ||| |||||||||| TTGAACTCTT GGAATATGGG TACTGGGACT ACTTCTCTGA ACTTCATGAC GAACCTGCAG 436 GACGGACCGT CATAGCCATG ACGGGACCGT CGCAAGCTTC GTAATGCCAC ACTTGGTCAG 120401 |||||||||| ||| | | || |||| ||| | || | |||||||||| GACGGACCGT CAT-G--A-- AC---TCCGT ----AGC--C ------CCGC ACTTGGTCAG 476 ACTTCCCCAT CTTCCTTCAG CAGCTTCGCT ACGCTGCCAC CTACGGACCG TCACAGGCAC 120341 |||||||||| |||| ||||| ||||| | || |||||||||| |||| ||||| ||||| |||| ACTTCCCCAT CTTCTTTCAG CAGCTGCACT ACGCTGCCAC CTACAGACCG TCACAAGCAC 536 GACGGACCAT CATAAGCTCC GTAGGTGGTC TCTTCTGCA- TT-TTCGCTC AAAATCTCCG 120283 |||||||| | ||||||||| |||||| ||| | ||||||| || ||| ||| |||||||||| GACGGACCGT CATAAGCTCT GTAGGTCGTC TATTCTGCAT TTCTTCACTC AAAATCTCCG 596 CATTCAGCTT TGGACAGATT TCCTGCAAAA 120253 |||||| ||| |||||||||| |||| |||| CATTCATCTT TGGACAGATT TCCTTAAAAA 626 hqPGS_C10HBa0115K16.1-_SGN-E261921- (120802 120253) ******************************************************************************** EST sequence 89 -strand 498 n (File: SGN-E258752-) 1 TCATGGTCAC GATGGACCGT CATGGACTCT GTCGTCCCAT ACTTATGCAA TTTCTTTTGC 61 TTCTCTCTTC ATTACCCTCG ACGGCAGGTA TGACGGACCG TCATAGGCAC AACGGTCTAT 121 CGAGGGTCTT CGTTTCAACA CACTTGAACT CTTGGAATAT GGGTACTGGG ACTACTTCTC 181 TGAACTTCAT GACGAACCTG CAGGACGGAC CGTCATGAAC TCCGTAGCCC CGCACTTGGT 241 CAGACTTCCC CATCTTCTTT CAGCAGCTGC ACTACGCTGC CACCTACAGA CCGTCACAAG 301 CACGACGGAC CGTCATAAGC TCTGTAGGTC GTCTATTCTG CATTTCTTCA CTCAAAATCT 361 CCGCATTCAT CTTTGGACAG ATTTCCTTAA AAAGTAAATC GCTTACTACT GAATGGAGAT 421 GCTTGGCGTC GAAAACATTG AGAACATGAC CACCAGTATA TCTTTTTCGT GAGATAAACC 481 TTGCACCATA CGTCCATA Predicted gene structure (within gDNA segment 123341 to 118549): Exon 1 121290 121281 ( 10 n); cDNA 4 13 ( 10 n); score: 0.700 Intron 1 121280 120654 ( 627 n); Pd: 0.999 (s: 0), Pa: 0.000 (s: 0.86) Exon 2 120653 120253 ( 401 n); cDNA 14 393 ( 380 n); score: 0.832 MATCH C10HBa0115K16.1- SGN-E258752- 0.832 411 0.825 C PGS_C10HBa0115K16.1-_SGN-E258752- (121290 121281,120653 120253) Alignment (genomic DNA sequence = upper lines): TGGTCTGGCT GCGTGTGTTG CTTTCCTAAC CCTTATCTTT ACCTCATATT AAGCATCGTA 121231 ||||| | | TGGTCACGAT .......... .......... .......... .......... .......... 13 TTCGATATTT GACTAAGTTA TTACCTCGTA CCAATCAATA CTAGCCTATT AGATAGCATA 121171 .......... .......... .......... .......... .......... .......... 13 CACTAAATCT ATGTTAATAC TTCTTTTCCT ATTATCTACC TCCTTGGTCC GACAAGTAGC 121111 .......... .......... .......... .......... .......... .......... 13 ATTAAGGCGA GTTCTAACGT TGATCATCCG TTAAAAAGAC TTCTAAGCGA AAGAATTATT 121051 .......... .......... .......... .......... .......... .......... 13 AATACATACA AGACACTATT CTAGAATTGT TCTTTTAGCT AGGGTTTATC TCATTATTTG 120991 .......... .......... .......... .......... .......... .......... 13 CCTATGGTTC CCACAACCCT AGTTATGGAT TTTAGTTCCT CATAGCCATA AACACAATAT 120931 .......... .......... .......... .......... .......... .......... 13 TCAAATATAT TAAATAAGAA TTCATCTACT TAATTCAATG AGAAAGAGTA AAGTCCGAAA 120871 .......... .......... .......... .......... .......... .......... 13 AATTGCTTGA TTAATTACCA AAAATCACTT GTAAGAATCT CCAAAAAATC AAACACTAAT 120811 .......... .......... .......... .......... .......... .......... 13 AAACAAAGTC TAATAATATG ATGTCTAATC TCCCAGAGTC TAACCTCAAA AATGAGGTTT 120751 .......... .......... .......... .......... .......... .......... 13 TTCGAACTAT TTATAAAAAA ATAAAAACCT AATTAAAGAA GGATTCTAAA TTACTGGAAA 120691 .......... .......... .......... .......... .......... .......... 13 TCTGCCAAAA CGCGGCTGGG TCGACGGACC ACGCGACGGA CCGTCGTGGA CTCCGTCGTC 120631 ||| ||||| |||| ||| |||||| .......... .......... .......... .......GGA CCGTCATGGA CTCTGTCGTC 36 CCATACTTGG TGCAATTTTC TTCTGTTGCT TTCTTCATTC CCCTCGACGG CAAGTGTGAC 120571 |||||||| ||||| |||| || || | || |||||||| |||||||||| || || |||| CCATACTT-A TGCAA-TTTC TTTTGCTTCT CTCTTCATTA CCCTCGACGG CAGGTATGAC 94 GGACCGTCAT TAGGCACAAC GGTCCGTCAG AGGGTC-TCG TTTCAAAATA CTTCAACTCT 120512 ||||||||| |||||||||| |||| || | |||||| ||| |||||| | | ||| |||||| GGACCGTCA- TAGGCACAAC GGTCTATC-G AGGGTCTTCG TTTCAACACA CTTGAACTCT 152 TGAAATCTGG GTACTGGGAT CACTTCTCTG ATCTTCACGA CGAACCTGCA GGACGGACCG 120452 || ||| ||| ||||||||| ||||||||| | ||||| || |||||||||| |||||||||| TGGAATATGG GTACTGGGAC TACTTCTCTG AACTTCATGA CGAACCTGCA GGACGGACCG 212 TCATAGCCAT GACGGGACCG TCGCAAGCTT CGTAATGCCA CACTTGGTCA GACTTCCCCA 120392 |||| | | || ||| | ||| | || |||||||||| |||||||||| TCAT-G--A- -AC---TCCG T----AGC-- C------CCG CACTTGGTCA GACTTCCCCA 252 TCTTCCTTCA GCAGCTTCGC TACGCTGCCA CCTACGGACC GTCACAGGCA CGACGGACCA 120332 ||||| |||| |||||| | | |||||||||| ||||| |||| |||||| ||| ||||||||| TCTTCTTTCA GCAGCTGCAC TACGCTGCCA CCTACAGACC GTCACAAGCA CGACGGACCG 312 TCATAAGCTC CGTAGGTGGT CTCTTCTGCA -TT-TTCGCT CAAAATCTCC GCATTCAGCT 120274 |||||||||| |||||| || || ||||||| || ||| || |||||||||| ||||||| || TCATAAGCTC TGTAGGTCGT CTATTCTGCA TTTCTTCACT CAAAATCTCC GCATTCATCT 372 TTGGACAGAT TTCCTGCAAA A 120253 |||||||||| ||||| ||| | TTGGACAGAT TTCCTTAAAA A 393 hqPGS_C10HBa0115K16.1-_SGN-E258752- (120653 120253) ******************************************************************************** EST sequence 82 -strand 582 n (File: SGN-E322644-) 1 AACAAGGACT CTATTTGCTG GAAATCTGCC AAAACGCGGC TGGGTCGACA GAACTCACGA 61 CGGATCGTCA TGGTCACGAT GGACCGTCAT GGACTCTGTC GTCCCATACT TATGCAATTT 121 CTTTTGCTTC TCTCTTCATT ACCCTCGACG GCAGGTATGA CGGACCGTCA TAGGCACAAC 181 GGTCTATCGA GGGTCTTCGT TTCAACACAC TTGAACTCTT GGAATATGGG TACTGGGACT 241 ACTTCTCTGA ACTTCATGAC GAACCTGCAG GACGGACCGT CATGAACTCC GTAGCCCCGC 301 ACTTGGTCAG ACTTCCCCAT CTTCTTTCAG CAGCTGCACT ACGCTGCCAC CTACAGACCG 361 TCACAAGCAC GACGGACCGT CATAAGCTCT GTAGGTCGTC TATTCTGCAT TTCTTCACTC 421 AAAATCTCCG CATTCATCTT TGGACAGATT TCCTTAAAAA GTAAATCGCT TACTACTGAA 481 TGGAGATGCT TGGCGTCGAA AACATTGAGA ACATGACCAC CAGTATATCT TTTTCGTGAG 541 ATAAACCTTG CACCATACGT CCATACCAGA TAGCCAAAGC AT Predicted gene structure (within gDNA segment 121477 to 118379): Exon 1 120653 120253 ( 401 n); cDNA 81 460 ( 380 n); score: 0.832 MATCH C10HBa0115K16.1- SGN-E322644- 0.832 401 0.689 C PGS_C10HBa0115K16.1-_SGN-E322644- (120653 120253) Alignment (genomic DNA sequence = upper lines): GGACCGTCGT GGACTCCGTC GTCCCATACT TGGTGCAATT TTCTTCTGTT GCTTTCTTCA 120594 |||||||| | |||||| ||| |||||||||| | ||||| | ||||| || | || |||||| GGACCGTCAT GGACTCTGTC GTCCCATACT T-ATGCAA-T TTCTTTTGCT TCTCTCTTCA 138 TTCCCCTCGA CGGCAAGTGT GACGGACCGT CATTAGGCAC AACGGTCCGT CAGAGGGTC- 120535 || ||||||| ||||| || | |||||||||| || ||||||| ||||||| | | ||||||| TTACCCTCGA CGGCAGGTAT GACGGACCGT CA-TAGGCAC AACGGTCTAT C-GAGGGTCT 196 TCGTTTCAAA ATACTTCAAC TCTTGAAATC TGGGTACTGG GATCACTTCT CTGATCTTCA 120475 ||||||||| | |||| ||| ||||| ||| |||||||||| || |||||| |||| ||||| TCGTTTCAAC ACACTTGAAC TCTTGGAATA TGGGTACTGG GACTACTTCT CTGAACTTCA 256 CGACGAACCT GCAGGACGGA CCGTCATAGC CATGACGGGA CCGTCGCAAG CTTCGTAATG 120415 ||||||||| |||||||||| ||||||| | | || |||| || | | TGACGAACCT GCAGGACGGA CCGTCAT-G- -A--AC---T CCGT----AG C--C------ 296 CCACACTTGG TCAGACTTCC CCATCTTCCT TCAGCAGCTT CGCTACGCTG CCACCTACGG 120355 || ||||||| |||||||||| |||||||| | ||||||||| | |||||||| |||||||| | CCGCACTTGG TCAGACTTCC CCATCTTCTT TCAGCAGCTG CACTACGCTG CCACCTACAG 356 ACCGTCACAG GCACGACGGA CCATCATAAG CTCCGTAGGT GGTCTCTTCT GCA-TT-TTC 120297 ||||||||| |||||||||| || ||||||| ||| |||||| |||| |||| ||| || ||| ACCGTCACAA GCACGACGGA CCGTCATAAG CTCTGTAGGT CGTCTATTCT GCATTTCTTC 416 GCTCAAAATC TCCGCATTCA GCTTTGGACA GATTTCCTGC AAAA 120253 ||||||||| |||||||||| ||||||||| |||||||| |||| ACTCAAAATC TCCGCATTCA TCTTTGGACA GATTTCCTTA AAAA 460 hqPGS_C10HBa0115K16.1-_SGN-E322644- (120653 120253) ******************************************************************************** EST sequence 33 -strand 464 n (File: SGN-E255290-) 1 TCCCATACTT ATGCAATTTC TTTTGCTTCT CTCTTCATTA CCCTCGACGG CAGGTATGAC 61 GGACCGTCAT AGGCACAACG GTCTATCGAG GGTCTTCGTT TCAACACACT TGAACTCTTG 121 GAATATGGGT ACTGGGACTA CTTCTCTGAA CTTCATGACG AACCTGCAGG ACGGACCGTC 181 ATGAACTCCG TAGCCCCGCA CTTGGTCAGA CTTCCCCATC TTCTTTCAGC AGCTGCACTA 241 CGCTGCCACC TACAGACCGT CACAAGCACG ACGGACCGTC ATAAGCTCTG TAGGTCGTCT 301 ATTCTGCATT TCTTCACTCA AAATCTCCGC ATTCATCTTT GGACAGATTT CCTTAAAAAG 361 TAAATCGCTT ACTACTGAAT GGAGATGCTT GGCGTCGAAA ACATTGAGAA CATGACCACC 421 AGTATATCTT TTTCGTGAGA TAAACCTTGC ACCATACGTC CATA Predicted gene structure (within gDNA segment 123001 to 118549): Exon 1 120632 120253 ( 380 n); cDNA 1 359 ( 359 n); score: 0.828 MATCH C10HBa0115K16.1- SGN-E255290- 0.828 380 0.819 C PGS_C10HBa0115K16.1-_SGN-E255290- (120632 120253) Alignment (genomic DNA sequence = upper lines): TCCCATACTT GGTGCAATTT TCTTCTGTTG CTTTCTTCAT TCCCCTCGAC GGCAAGTGTG 120573 |||||||||| ||||| || |||| || | || ||||||| | |||||||| |||| || || TCCCATACTT -ATGCAA-TT TCTTTTGCTT CTCTCTTCAT TACCCTCGAC GGCAGGTATG 58 ACGGACCGTC ATTAGGCACA ACGGTCCGTC AGAGGGTC-T CGTTTCAAAA TACTTCAACT 120514 |||||||||| | |||||||| |||||| || ||||||| | |||||||| | |||| |||| ACGGACCGTC A-TAGGCACA ACGGTCTATC -GAGGGTCTT CGTTTCAACA CACTTGAACT 116 CTTGAAATCT GGGTACTGGG ATCACTTCTC TGATCTTCAC GACGAACCTG CAGGACGGAC 120454 |||| ||| | |||||||||| | ||||||| ||| ||||| |||||||||| |||||||||| CTTGGAATAT GGGTACTGGG ACTACTTCTC TGAACTTCAT GACGAACCTG CAGGACGGAC 176 CGTCATAGCC ATGACGGGAC CGTCGCAAGC TTCGTAATGC CACACTTGGT CAGACTTCCC 120394 |||||| | | || | ||| ||| | | | |||||||| |||||||||| CGTCAT-G-- A--AC---TC CGT----AGC --C------C CGCACTTGGT CAGACTTCCC 216 CATCTTCCTT CAGCAGCTTC GCTACGCTGC CACCTACGGA CCGTCACAGG CACGACGGAC 120334 ||||||| || |||||||| | ||||||||| ||||||| || |||||||| | |||||||||| CATCTTCTTT CAGCAGCTGC ACTACGCTGC CACCTACAGA CCGTCACAAG CACGACGGAC 276 CATCATAAGC TCCGTAGGTG GTCTCTTCTG CA-TT-TTCG CTCAAAATCT CCGCATTCAG 120276 | |||||||| || |||||| |||| ||||| || || ||| |||||||||| ||||||||| CGTCATAAGC TCTGTAGGTC GTCTATTCTG CATTTCTTCA CTCAAAATCT CCGCATTCAT 336 CTTTGGACAG ATTTCCTGCA AAA 120253 |||||||||| ||||||| | ||| CTTTGGACAG ATTTCCTTAA AAA 359 hqPGS_C10HBa0115K16.1-_SGN-E255290- (120632 120253) ******************************************************************************** EST sequence 86 -strand 402 n (File: SGN-E258181-) 1 ACGGACCGTC ATAGGCACAA CGGTCTATAG AGGGTTTTCG TTTCAACACA CTTGAACTCT 61 TGGAATATGG GTACTGGGAC TACTTCTCTG AACTTCATGA CGAACCTGCA GGACGGACCG 121 TCATGAACTC CGTAGCCCCG CACTTGGTCA GACTTCCCCA TCTTCTTTCA GCAGCTGCAC 181 TACGCTGCCA CCTACAGACC GTCACAAGCA CGACGGACCG TCATAAGCTC TGTAGGTCGT 241 CTATTCTGCA TTTCTTCACT CAAAATCTCC GCATTCATCT TTGGACAGAT TTCCTTAAAA 301 AGTAAATCGC TTACTACTGA ATGGAGATGC TTGGCGTCGA AAACATTGAG AACATGACCA 361 CCAGTATATC TTTTTCGTGA GATAAACCTT GCACCATACG TC Predicted gene structure (within gDNA segment 122421 to 118589): Exon 1 120572 120253 ( 320 n); cDNA 1 301 ( 301 n); score: 0.823 MATCH C10HBa0115K16.1- SGN-E258181- 0.823 320 0.796 C PGS_C10HBa0115K16.1-_SGN-E258181- (120572 120253) Alignment (genomic DNA sequence = upper lines): ACGGACCGTC ATTAGGCACA ACGGTCCGTC AGAGGG-TCT CGTTTCAAAA TACTTCAACT 120514 |||||||||| | |||||||| |||||| | |||||| | | |||||||| | |||| |||| ACGGACCGTC A-TAGGCACA ACGGTCTAT- AGAGGGTTTT CGTTTCAACA CACTTGAACT 58 CTTGAAATCT GGGTACTGGG ATCACTTCTC TGATCTTCAC GACGAACCTG CAGGACGGAC 120454 |||| ||| | |||||||||| | ||||||| ||| ||||| |||||||||| |||||||||| CTTGGAATAT GGGTACTGGG ACTACTTCTC TGAACTTCAT GACGAACCTG CAGGACGGAC 118 CGTCATAGCC ATGACGGGAC CGTCGCAAGC TTCGTAATGC CACACTTGGT CAGACTTCCC 120394 |||||| | | || | ||| ||| | | | |||||||| |||||||||| CGTCAT-G-- A--AC---TC CGT----AGC --C------C CGCACTTGGT CAGACTTCCC 158 CATCTTCCTT CAGCAGCTTC GCTACGCTGC CACCTACGGA CCGTCACAGG CACGACGGAC 120334 ||||||| || |||||||| | ||||||||| ||||||| || |||||||| | |||||||||| CATCTTCTTT CAGCAGCTGC ACTACGCTGC CACCTACAGA CCGTCACAAG CACGACGGAC 218 CATCATAAGC TCCGTAGGTG GTCTCTTCTG CA-TT-TTCG CTCAAAATCT CCGCATTCAG 120276 | |||||||| || |||||| |||| ||||| || || ||| |||||||||| ||||||||| CGTCATAAGC TCTGTAGGTC GTCTATTCTG CATTTCTTCA CTCAAAATCT CCGCATTCAT 278 CTTTGGACAG ATTTCCTGCA AAA 120253 |||||||||| ||||||| | ||| CTTTGGACAG ATTTCCTTAA AAA 301 hqPGS_C10HBa0115K16.1-_SGN-E258181- (120572 120253) ******************************************************************************** EST sequence 262 +strand 737 n (File: SGN-E369290+) 1 TTTTTTTTTT TTTTTTTTTT TTTAAAATCC AAAAGTTTGC TTGATTAATC ACCAATAATC 61 ACTTGCAAGA ATCTTAAAGT AATCAACAAT CTCACAAAAA GTGTAATGAT TCTCAAAAGT 121 CTAACAATAC AGTGTCTACT AATATGATGT CTAACAATAC GGAGTATAAC CTCAAAAACG 181 AGGTTTTTCG AACTATTTAT AGAAAATAAA AACCTAACTA AACAAGGACT CTATTTGCTG 241 GAAATCTGCC AAAACGCGGC TGGGTCGACA GAACTCACGA CGGATCGTCA TGGTCACGAT 301 GGACCGTCAT GGACTCTGTC GTCCCATACT TATGCAATTT CTTTTGCTTC TCTCTTCATT 361 ACCCTCGACG GCAGGTATGA CGGACCGTCA TAGGCACAAC GGTCTATCGA GGGTCTTCGT 421 TTCAACACAC TTGAACTCTT GGAATATGGG TACTGGGACT ACTTCTCTGA ACTTCATGAC 481 GAACCTGCAG GACGGACCGT CATGAACTCC GTAGCCCCGC ACTTGGTCAG ACTTCCCCAT 541 CTTCTTTCAG CAGCTGCACT ACGCTGCCAC CTACAGACCG TCACAAGCAC GACGGACCGT 601 CATAAGCTCT GTAGGTCGTC TATTCTGCAT TTCTTCACTC AAAATCTCCG CATTCATCTT 661 TGGACAGATT TCCTTAAAAA GTAAATCGCT TACTACTGAA TGGAGATGCT TGGCGTCGAA 721 AACATTGAGA ACATGAC Predicted gene structure (within gDNA segment 123667 to 119019): Exon 1 122629 122614 ( 16 n); cDNA 87 101 ( 15 n); score: 0.812 Intron 1 122613 120842 (1772 n); Pd: 0.552 (s: 0), Pa: 0.000 (s: 0.70) Exon 2 120841 120259 ( 583 n); cDNA 102 674 ( 573 n); score: 0.751 PPA cDNA 23 1 MATCH C10HBa0115K16.1- SGN-E369290+ 0.751 599 0.813 C PGS_C10HBa0115K16.1-_SGN-E369290+ (122629 122614,120841 120259) Alignment (genomic DNA sequence = upper lines): CAATCTCAGC ATAAGGGCAT TCTCCATAAG ATCCACCTGC TATAGTGTCC AACACTGCTT 122570 |||||||| | | || | CAATCTCA-C AAAAAG.... .......... .......... .......... .......... 101 TATTGTTATT ATCCTGTCCC CGATAGAAGT ATTCCTTCAG TGACTCATCA TCAATACGGT 122510 .......... .......... .......... .......... .......... .......... 101 GATTTGGAAC ACTTCTCAAG AATGACGTGA ATCTATCCCA AGAACTACTA ACTGACTCTC 122450 .......... .......... .......... .......... .......... .......... 101 CTGGTAGTGC CACAAAGTTA TTCACCCTGT CTTTGTGGTT TAATTTCTTG GAGACCGGAT 122390 .......... .......... .......... .......... .......... .......... 101 AGTAGCGTGC TAAGAAGACA TCCCGTAGTT GGTTCCAAGT GAAGATGGAG TTGTATGGGA 122330 .......... .......... .......... .......... .......... .......... 101 GCTCAGTAAA CCACATAGAA GCCTCTCCCG TCAGTGAGAG AGGAAACACT CTGAGACCTA 122270 .......... .......... .......... .......... .......... .......... 101 TTACATCTAG ATCCAAATCA GGCCTCCCCA CACAACTTTT ACACACTGCC CTAACCTTAG 122210 .......... .......... .......... .......... .......... .......... 101 CTATATGGGC ATGTGGATCC TCAGAAGGTA GCCCTGAAAA CAAACCTCTG GCAGTGAGCA 122150 .......... .......... .......... .......... .......... .......... 101 TTTGCATCAG GCTACTAGTT ACCACAAAAG TGTGGCCTGT GGGTAGAGGG GGCAAGACAA 122090 .......... .......... .......... .......... .......... .......... 101 GTGGCCCATC CGAGTCTGTG ATGTTATCAT ACCCTCTGTA GTATGCTTGG GGCCGTGGAA 122030 .......... .......... .......... .......... .......... .......... 101 TGGGATTTTG TCCCCTCTGT TGATGTTCAC CCAGAGCGTC GAGTACCATC TGACCATGAA 121970 .......... .......... .......... .......... .......... .......... 101 CATCCACTGG ATTTAGGATG TTCTGGTTTG GATCCTCATC ATTTATTCCC AAGTTTCGAT 121910 .......... .......... .......... .......... .......... .......... 101 TCATATTGCG CAGTGTACGC TCTAGCTCGT GATCGTTGGG AAAAAAGGGT TCTCTTCCTC 121850 .......... .......... .......... .......... .......... .......... 101 TCCGTGTATT TGGCATACAA GGAGGATAGT TCTGAAAGGA AATAAAAAAC AATAAAACAA 121790 .......... .......... .......... .......... .......... .......... 101 AGTAAAATCA AGAAAATATC AACTAAACTT TAGTAATAAG TTTAAGTTAA TCTAAAAGCT 121730 .......... .......... .......... .......... .......... .......... 101 AAATTCCCCG GCAGCGGCGC CAAAATTTGA TACGCTCAAA CTTACTTCTC AAATGAGAAG 121670 .......... .......... .......... .......... .......... .......... 101 TAAAGCGGTC GCGTCAAGTA AATAACCCAA CTAGTGAGGT TGGGATCGTT CCCACGAGGA 121610 .......... .......... .......... .......... .......... .......... 101 AAATAGTCTA GACTTACCTT CAACTTGTTA TTACTATTGT TCGGTTGATG ATTTCCTTAG 121550 .......... .......... .......... .......... .......... .......... 101 AAAGTAAAAA CATAAAAAGG GGGTTTTGTA TTTCCTAATG AGTAAAAATA ACTAACGGAC 121490 .......... .......... .......... .......... .......... .......... 101 TTGAAAGAGA CACTTAACAA CTTTTAATGT TGGGTTTTAA TCAATTAATC AAAGTAACTA 121430 .......... .......... .......... .......... .......... .......... 101 GGGTTTACGT GTTCCCCACA GGTTCATAAC TTGATAATTC TAACTATAAC AATTCTTTCC 121370 .......... .......... .......... .......... .......... .......... 101 TAGTATCTTG CATGCAAAGT GATAAATTAT GTATTTCTAA ATCCTTGGTC CGGCATCTAG 121310 .......... .......... .......... .......... .......... .......... 101 AAAATCTCAC TCCGCACCTT GGTCTGGCTG CGTGTGTTGC TTTCCTAACC CTTATCTTTA 121250 .......... .......... .......... .......... .......... .......... 101 CCTCATATTA AGCATCGTAT TCGATATTTG ACTAAGTTAT TACCTCGTAC CAATCAATAC 121190 .......... .......... .......... .......... .......... .......... 101 TAGCCTATTA GATAGCATAC ACTAAATCTA TGTTAATACT TCTTTTCCTA TTATCTACCT 121130 .......... .......... .......... .......... .......... .......... 101 CCTTGGTCCG ACAAGTAGCA TTAAGGCGAG TTCTAACGTT GATCATCCGT TAAAAAGACT 121070 .......... .......... .......... .......... .......... .......... 101 TCTAAGCGAA AGAATTATTA ATACATACAA GACACTATTC TAGAATTGTT CTTTTAGCTA 121010 .......... .......... .......... .......... .......... .......... 101 GGGTTTATCT CATTATTTGC CTATGGTTCC CACAACCCTA GTTATGGATT TTAGTTCCTC 120950 .......... .......... .......... .......... .......... .......... 101 ATAGCCATAA ACACAATATT CAAATATATT AAATAAGAAT TCATCTACTT AATTCAATGA 120890 .......... .......... .......... .......... .......... .......... 101 GAAAGAGTAA AGTCCGAAAA ATTGCTTGAT TAATTACCAA AAATCACTTG TAAGAATCTC 120830 || ||| || || .......... .......... .......... .......... ........TG TAATGAT-TC 112 CAAAAAATCA AACACTAATA AACAAAGTCT AATAATATGA TGTCTAATCT CCCAGAGTCT 120770 |||| || | || ||| ||| |||| | |||||||| ||||||| | |||| | TCAAAAGTC- TA-AC-AAT- -ACAGTGTCT ACTAATATGA TGTCTAACAA TACGGAGTAT 167 AACCTCAAAA ATGAGGTTTT TCGAACTATT TATAAAAAAA TAAAAACCTA ATTAAAGAAG 120710 |||||||||| | |||||||| |||||||||| ||| | |||| |||||||||| | |||| ||| AACCTCAAAA ACGAGGTTTT TCGAACTATT TAT-AGAAAA TAAAAACCTA ACTAAACAAG 226 GATTCTAAAT TACTGGAAAT CTGCCAAAAC GCGGCTGGGT CGACGGACCA CGCGACGGAC 120650 || ||| | | | |||||||| |||||||||| |||||||||| |||| || | | ||||||| GACTCT-ATT TGCTGGAAAT CTGCCAAAAC GCGGCTGGGT CGACAGAACT CACGACGGAT 285 CGTCGTGGAC TCCGTCGTCC --CAT--ACT -TG--GT-GC A-A-TT-TTC ---TTCTGTT 120604 |||| ||| | | | | || ||| ||| || || | | | || | | |||| || CGTCATGGTC ACGATGGACC GTCATGGACT CTGTCGTCCC ATACTTATGC AATTTCTTTT 345 GC-T-T-TCT TCATTCCCCT CGACGGCAAG TGTGACGGAC CGTCATTAGG CACAACGGTC 120547 || | | ||| ||||| |||| |||||||| | | |||||||| ||||| |||| |||||||||| GCTTCTCTCT TCATTACCCT CGACGGCAGG TATGACGGAC CGTCA-TAGG CACAACGGTC 404 CGTCAGAGGG TC-TCGTTTC AAAATACTTC AACTCTTGAA ATCTGGGTAC TGGGATCACT 120488 || ||||| || ||||||| || | |||| |||||||| | || ||||||| ||||| ||| TATC-GAGGG TCTTCGTTTC AACACACTTG AACTCTTGGA ATATGGGTAC TGGGACTACT 463 TCTCTGATCT TCACGACGAA CCTGCAGGAC GGACCGTCAT AGCCATGACG GGACCGTCGC 120428 ||||||| || ||| |||||| |||||||||| |||||||||| | | || |||| TCTCTGAACT TCATGACGAA CCTGCAGGAC GGACCGTCAT -G--A--AC- --TCCGT--- 512 AAGCTTCGTA ATGCCACACT TGGTCAGACT TCCCCATCTT CCTTCAGCAG CTTCGCTACG 120368 ||| | || |||| |||||||||| |||||||||| | |||||||| || | ||||| -AGC--C--- ---CCGCACT TGGTCAGACT TCCCCATCTT CTTTCAGCAG CTGCACTACG 563 CTGCCACCTA CGGACCGTCA CAGGCACGAC GGACCATCAT AAGCTCCGTA GGTGGTCTCT 120308 |||||||||| | |||||||| || ||||||| ||||| |||| |||||| ||| ||| |||| | CTGCCACCTA CAGACCGTCA CAAGCACGAC GGACCGTCAT AAGCTCTGTA GGTCGTCTAT 623 TCTGCA-TT- TTCGCTCAAA ATCTCCGCAT TCAGCTTTGG ACAGATTTCC T 120259 |||||| || ||| |||||| |||||||||| ||| |||||| |||||||||| | TCTGCATTTC TTCACTCAAA ATCTCCGCAT TCATCTTTGG ACAGATTTCC T 674 hqPGS_C10HBa0115K16.1-_SGN-E369290+ (120841 120259) ******************************************************************************** EST sequence 260 +strand 783 n (File: SGN-E546250+) 1 TTTTTTTTTT TTGAGAAAAA ATAAAATTCA GAAATTTACT TGATTAATCG ACAAAATCAC 61 CAACAATCAA CTCCAGAGAA AAGTGTAATA ATAAAAATAA TCTCCTCACA AAGAATATAA 121 CATAAAAGTG TCTAATAACT AAGAGTCTAA CCCCAAAAAT GAGGTTTTTT GAACTATTTT 181 TTTAAAAAAT AAAAATCTAA TCAAAGAAGG ACTCTATTTG TTGAAAATCT GTCGAAACGC 241 GATTTGGTCG ACGGACCTCG GGACGGGTCG TCGTGGTCAC GACGGGTCAT CATGGACTCC 301 GTCGTCCCAT ACTTGGCGAA TTCTTCTGCT GCTGTCTTCA TTACGCTCGG CGGCAGGTAT 361 GACGGATTGT CACATGCATA ATTTCTCTGA CTACTTCTCT GATCTTCACG ACGAACCAGC 421 AGGACGGACC GTCATGGTTA CGACGGTCCG TCACGCACTC CGTAACCCAC ACTTGGTCAG 481 ACTTCCCCAT CTTCCTTCAG CAGCTTCACT ACGATGCCAC CTATGGACCG TTACAGGCAC 541 GACGGACCGT TACAAGCTCC GTAGGTGGTA CTTTTCTGCA GTTTTTGCTC AAAAACTTCC 601 GCGTTCATCT TTAGACAAAT TTCCTGGACG GGTCTGTTAC AGATCTGTCT TTGACAAACT 661 CAAAATTTCA AAAGTTTCAC CGGAGCTCAC TTGTTCAGAG TCTCGCCTAG AGATGCTTGG 721 TTGTTGGAGC TTGTGTTGCT CTCCTCATCG GCTGTCGTTG CTGCTGCTTT TGGTTGTTTT 781 GTC Predicted gene structure (within gDNA segment 125010 to 117562): Exon 1 122628 122614 ( 15 n); cDNA 99 113 ( 15 n); score: 0.733 Intron 1 122613 121800 ( 814 n); Pd: 0.552 (s: 0), Pa: 0.000 (s: 0) Exon 2 121799 121789 ( 11 n); cDNA 114 124 ( 11 n); score: 0.818 Intron 2 121788 120794 ( 995 n); Pd: 0.932 (s: 0), Pa: 0.000 (s: 0.82) Exon 3 120793 120528 ( 266 n); cDNA 125 385 ( 261 n); score: 0.658 Intron 3 120527 120498 ( 30 n); Pd: 0.000 (s: 0.52), Pa: 0.000 (s: 0.90) ?? Exon 4 120497 120259 ( 239 n); cDNA 386 625 ( 240 n); score: 0.835 PPA cDNA 12 1 MATCH C10HBa0115K16.1- SGN-E546250+ 0.742 531 0.678 C PGS_C10HBa0115K16.1-_SGN-E546250+ (122628 122614,121799 121789,120793 120528,120497 120259) Alignment (genomic DNA sequence = upper lines): AATCTCAGCA TAAGGGCATT CTCCATAAGA TCCACCTGCT ATAGTGTCCA ACACTGCTTT 122569 |||||| || || | AATCTCCTCA CAAAG..... .......... .......... .......... .......... 113 ATTGTTATTA TCCTGTCCCC GATAGAAGTA TTCCTTCAGT GACTCATCAT CAATACGGTG 122509 .......... .......... .......... .......... .......... .......... 113 ATTTGGAACA CTTCTCAAGA ATGACGTGAA TCTATCCCAA GAACTACTAA CTGACTCTCC 122449 .......... .......... .......... .......... .......... .......... 113 TGGTAGTGCC ACAAAGTTAT TCACCCTGTC TTTGTGGTTT AATTTCTTGG AGACCGGATA 122389 .......... .......... .......... .......... .......... .......... 113 GTAGCGTGCT AAGAAGACAT CCCGTAGTTG GTTCCAAGTG AAGATGGAGT TGTATGGGAG 122329 .......... .......... .......... .......... .......... .......... 113 CTCAGTAAAC CACATAGAAG CCTCTCCCGT CAGTGAGAGA GGAAACACTC TGAGACCTAT 122269 .......... .......... .......... .......... .......... .......... 113 TACATCTAGA TCCAAATCAG GCCTCCCCAC ACAACTTTTA CACACTGCCC TAACCTTAGC 122209 .......... .......... .......... .......... .......... .......... 113 TATATGGGCA TGTGGATCCT CAGAAGGTAG CCCTGAAAAC AAACCTCTGG CAGTGAGCAT 122149 .......... .......... .......... .......... .......... .......... 113 TTGCATCAGG CTACTAGTTA CCACAAAAGT GTGGCCTGTG GGTAGAGGGG GCAAGACAAG 122089 .......... .......... .......... .......... .......... .......... 113 TGGCCCATCC GAGTCTGTGA TGTTATCATA CCCTCTGTAG TATGCTTGGG GCCGTGGAAT 122029 .......... .......... .......... .......... .......... .......... 113 GGGATTTTGT CCCCTCTGTT GATGTTCACC CAGAGCGTCG AGTACCATCT GACCATGAAC 121969 .......... .......... .......... .......... .......... .......... 113 ATCCACTGGA TTTAGGATGT TCTGGTTTGG ATCCTCATCA TTTATTCCCA AGTTTCGATT 121909 .......... .......... .......... .......... .......... .......... 113 CATATTGCGC AGTGTACGCT CTAGCTCGTG ATCGTTGGGA AAAAAGGGTT CTCTTCCTCT 121849 .......... .......... .......... .......... .......... .......... 113 CCGTGTATTT GGCATACAAG GAGGATAGTT CTGAAAGGAA ATAAAAAACA ATAAAACAAA 121789 | ||| |||| | .......... .......... .......... .......... .........A ATATAACATA 124 GTAAAATCAA GAAAATATCA ACTAAACTTT AGTAATAAGT TTAAGTTAAT CTAAAAGCTA 121729 .......... .......... .......... .......... .......... .......... 124 AATTCCCCGG CAGCGGCGCC AAAATTTGAT ACGCTCAAAC TTACTTCTCA AATGAGAAGT 121669 .......... .......... .......... .......... .......... .......... 124 AAAGCGGTCG CGTCAAGTAA ATAACCCAAC TAGTGAGGTT GGGATCGTTC CCACGAGGAA 121609 .......... .......... .......... .......... .......... .......... 124 AATAGTCTAG ACTTACCTTC AACTTGTTAT TACTATTGTT CGGTTGATGA TTTCCTTAGA 121549 .......... .......... .......... .......... .......... .......... 124 AAGTAAAAAC ATAAAAAGGG GGTTTTGTAT TTCCTAATGA GTAAAAATAA CTAACGGACT 121489 .......... .......... .......... .......... .......... .......... 124 TGAAAGAGAC ACTTAACAAC TTTTAATGTT GGGTTTTAAT CAATTAATCA AAGTAACTAG 121429 .......... .......... .......... .......... .......... .......... 124 GGTTTACGTG TTCCCCACAG GTTCATAACT TGATAATTCT AACTATAACA ATTCTTTCCT 121369 .......... .......... .......... .......... .......... .......... 124 AGTATCTTGC ATGCAAAGTG ATAAATTATG TATTTCTAAA TCCTTGGTCC GGCATCTAGA 121309 .......... .......... .......... .......... .......... .......... 124 AAATCTCACT CCGCACCTTG GTCTGGCTGC GTGTGTTGCT TTCCTAACCC TTATCTTTAC 121249 .......... .......... .......... .......... .......... .......... 124 CTCATATTAA GCATCGTATT CGATATTTGA CTAAGTTATT ACCTCGTACC AATCAATACT 121189 .......... .......... .......... .......... .......... .......... 124 AGCCTATTAG ATAGCATACA CTAAATCTAT GTTAATACTT CTTTTCCTAT TATCTACCTC 121129 .......... .......... .......... .......... .......... .......... 124 CTTGGTCCGA CAAGTAGCAT TAAGGCGAGT TCTAACGTTG ATCATCCGTT AAAAAGACTT 121069 .......... .......... .......... .......... .......... .......... 124 CTAAGCGAAA GAATTATTAA TACATACAAG ACACTATTCT AGAATTGTTC TTTTAGCTAG 121009 .......... .......... .......... .......... .......... .......... 124 GGTTTATCTC ATTATTTGCC TATGGTTCCC ACAACCCTAG TTATGGATTT TAGTTCCTCA 120949 .......... .......... .......... .......... .......... .......... 124 TAGCCATAAA CACAATATTC AAATATATTA AATAAGAATT CATCTACTTA ATTCAATGAG 120889 .......... .......... .......... .......... .......... .......... 124 AAAGAGTAAA GTCCGAAAAA TTGCTTGATT AATTACCAAA AATCACTTGT AAGAATCTCC 120829 .......... .......... .......... .......... .......... .......... 124 AAAAAATCAA ACACTAATAA ACAAAGTCTA ATAATATGAT GTCTAATCTC CCAGAGTCTA 120769 | | ||||||| | |||||||| .......... .......... .......... .....AAAGT GTCTAATAAC TAAGAGTCTA 149 ACCTCAAAAA TGAGGTTTTT CGAACTA-TT TATAAAAAAA TAAAAACCTA ATTAAAGAAG 120710 ||| |||||| |||||||||| |||||| || | | |||||| |||||| ||| || ||||||| ACCCCAAAAA TGAGGTTTTT TGAACTATTT TTTTAAAAAA TAAAAATCTA ATCAAAGAAG 209 GATTCTAAAT TACTGGAAAT CTGCCAAAAC GCGGCTGGGT CGACGGACCA CGCGACGGAC 120650 || ||| | | | || |||| ||| | |||| ||| | ||| ||||||||| || ||||| GACTCT-ATT TGTTGAAAAT CTGTCGAAAC GCGATTTGGT CGACGGACCT CGGGACGGGT 268 CGTCGTGGAC TCCGTCGTCC CATACTTGGT GCAATTTTCT TCTGTTGCTT TCTTCATTCC 120590 |||||||| | || || ||| | ||| | || || | ||| |||| CGTCGTGGTC -ACGACGGGT CAT-CATGG- AC-TCCGTCG TCCCATACTT GGCGAATTCT 324 CCT-CGACGG CAAGTGTGAC GGACCGTCAT TAGGCACAAC GGTCCGTCAG AGGGTCTCGT 120531 || | | | | || | || | ||| | || || |||| | | | | TCTGCTGCTG TCTTCATTAC -GCTCGGCGG CAGGTATGAC GGATTGTCAC A-TGCATAAT 382 TTCAAAATAC TTCAACTCTT GAAATCTGGG TACTGGGATC ACTTCTCTGA TCTTCACGAC 120471 ||| | || |||||||||| |||||||||| TTC....... .......... .......... ...TCTGACT ACTTCTCTGA TCTTCACGAC 412 GAACCTGCAG GACGGACCGT CATAGCCATG ACGGGACCGT CGCAAGCTTC GTAATGCCAC 120411 ||||| |||| |||||||||| ||| | | | || || |||| | | || | |||| |||| GAACCAGCAG GACGGACCGT CATGGTTACG AC-GGTCCGT CACGCACTCC GTAA-CCCAC 470 ACTTGGTCAG ACTTCCCCAT CTTCCTTCAG CAGCTTCGCT ACGCTGCCAC CTACGGACCG 120351 |||||||||| |||||||||| |||||||||| ||||||| || ||| |||||| ||| |||||| ACTTGGTCAG ACTTCCCCAT CTTCCTTCAG CAGCTTCACT ACGATGCCAC CTATGGACCG 530 TCACAGGCAC GACGGACCAT CATAAGCTCC GTAGGTGGT- CTCTTCTGCA -TTTTCGCTC 120293 | |||||||| |||||||| | | ||||||| ||||||||| || ||||||| |||| |||| TTACAGGCAC GACGGACCGT TACAAGCTCC GTAGGTGGTA CTTTTCTGCA GTTTTTGCTC 590 AAAATC-TCC GCATTCAGCT TTGGACAGAT TTCCT 120259 |||| | ||| || |||| || || |||| || ||||| AAAAACTTCC GCGTTCATCT TTAGACAAAT TTCCT 625 hqPGS_C10HBa0115K16.1-_SGN-E546250+ (120497 120259) ******************************************************************************** EST sequence 97 -strand 767 n (File: SGN-E546251-) 1 CTGCTGCTGT CTTCATTACG CTCGGCGGCA GGTATGACGG ATTGTCACAT GCATAATTTC 61 TCTGACTACT TCTCTGATCT TCACGACGAA CCAGCAGGAC GGACCGTCAT GGTTACGACG 121 GTCCGTCACG CACTTCCGTA ACCCACACTT GGTCAGACTT CCCCATCTTC CTTCAGCAGC 181 TTCACTACGA TGCCACCTAT GGACCGTTAC AGGCACGACG GACCGTTACA AGCTCCGTAG 241 GTGGTACTTT TCTGCAGTTT TTGCTCAAAA ACTTCCGCGT TCATCTTTAG ACAAATTTCC 301 TGGACGGGTC TGTTACAGAT CTGTCTTTGA CAAACTCAAA ATTTCAAAAG TTTCACCGGA 361 GCTCACTTGT TCAGAGTCTC GCCTAGAGAT GCTTGGTTGT TGGAGCTTGT GTTGCTCTCC 421 TCATCGGCTG TCGTTGCTGC TGCTTTTGGT TGTTTTGTCG GAGACAAGGA GAAGAGGAGA 481 GGAGTTGAGC GACGTTGCCT CACCACTGCT ACTGGTGTTT CTGTCCGGAT GCTGGTTGCT 541 GCTTCTCGTT GCTTTCACCG AGCTGCTGTC CACAGAATAA GAGCAGAGGC AGCCAGCGCC 601 TGCTGGTTCC TGCACTGTTG CTCCTCTACC GGAGGAGAAG AGAAAAAATG AGAGGGAGCG 661 AAGGCGAAGA GAAGAGAGGG GAGGAACAGA GGGACGGAGG AAGGTGGCCA CCTCTGCCTT 721 CGCGGCGTTT TGCCGGAGCA AGGAGAGAGG AGGGGTAGCG GCTGCTT Predicted gene structure (within gDNA segment 121770 to 113892): Exon 1 120488 120259 ( 230 n); cDNA 70 301 ( 232 n); score: 0.839 Intron 1 120258 114731 (5528 n); Pd: 0.000 (s: 0.77), Pa: 0.638 (s: 0.57) Exon 2 114730 114682 ( 49 n); cDNA 302 349 ( 48 n); score: 0.571 MATCH C10HBa0115K16.1- SGN-E546251- 0.839 279 0.364 C PGS_C10HBa0115K16.1-_SGN-E546251- (120488 120259,114730 114682) Alignment (genomic DNA sequence = upper lines): TTCTCTGATC TTCACGACGA ACCTGCAGGA CGGACCGTCA TAGCCATGAC GGGACCGTCG 120429 |||||||||| |||||||||| ||| |||||| |||||||||| | | | ||| || ||||| TTCTCTGATC TTCACGACGA ACCAGCAGGA CGGACCGTCA TGGTTACGAC -GGTCCGTCA 128 CAAGCTTC-G TAATGCCACA CTTGGTCAGA CTTCCCCATC TTCCTTCAGC AGCTTCGCTA 120370 | |||| | ||| ||||| |||||||||| |||||||||| |||||||||| |||||| ||| CGCACTTCCG TAA-CCCACA CTTGGTCAGA CTTCCCCATC TTCCTTCAGC AGCTTCACTA 187 CGCTGCCACC TACGGACCGT CACAGGCACG ACGGACCATC ATAAGCTCCG TAGGTGGT-C 120311 || ||||||| || ||||||| ||||||||| ||||||| | | |||||||| |||||||| | CGATGCCACC TATGGACCGT TACAGGCACG ACGGACCGTT ACAAGCTCCG TAGGTGGTAC 247 TCTTCTGCA- TTTTCGCTCA AAATC-TCCG CATTCAGCTT TGGACAGATT TCCTGCAAAA 120253 | ||||||| |||| ||||| ||| | |||| | |||| ||| | |||| ||| |||| TTTTCTGCAG TTTTTGCTCA AAAACTTCCG CGTTCATCTT TAGACAAATT TCCT...... 301 CAAAGAGCAA TTTATATCAA AATTAGCACA AAAAAGACTT TCGGACACAC TAAACTTAAG 120193 .......... .......... .......... .......... .......... .......... 301 GAAAAAGTAT TAATTATACC GTGAAACCAC GGTATATCAC CTCTCTCAAT TTTTCTTGCC 120133 .......... .......... .......... .......... .......... .......... 301 ATATATACAA ATACATATGT ATAAAATATA AAATTATATA ACCAATATAA ATATACAATT 120073 .......... .......... .......... .......... .......... .......... 301 CACCTCTCTC TCACTCTTTG TCCTATGTCG CTCTCCTCTC TCCTCTCTCG CAATCTCGCT 120013 .......... .......... .......... .......... .......... .......... 301 TGCCTCTCTC CTCTCTCTCG CAGTGTCGCT TGCCTCTCTC CTCTCTATAA CATGTAGCTA 119953 .......... .......... .......... .......... .......... .......... 301 TGAATTGAAA TTATCAAACT ATAGCTATGG ATAGTAATAA TGATATTTTT GAGTCGCTAT 119893 .......... .......... .......... .......... .......... .......... 301 ATGTGAAAGT TTCTTTCCAA AAAATGGTCA GTAAAGCCGA CAAGTACGTG GACGAGCTTG 119833 .......... .......... .......... .......... .......... .......... 301 TCGGATCAGT CCTCTTTGCT TATTTTTTTC GAATTAAATT ATAATCTAAA AATAATATCA 119773 .......... .......... .......... .......... .......... .......... 301 TAAATATCGA AAAAATAATA TTATATGGCG TTAGTATTAC TACTTGTTAA TCAAATACAC 119713 .......... .......... .......... .......... .......... .......... 301 AAATAAAATT ATTCTTATAA TATTTTTATT GAGTTTGATT TCAAATAAAA GCATAAATAA 119653 .......... .......... .......... .......... .......... .......... 301 CTTAATAGTA ATATTAACCT AATTGTTTTC CAATAATCAT AATAAAACAC AAAAAATATG 119593 .......... .......... .......... .......... .......... .......... 301 ACAATATTCC ATAGGCTATG TAATATTTCA AACTTTAAAT AGATTTTGAG TTTAGACTCT 119533 .......... .......... .......... .......... .......... .......... 301 TATTATTTTT AATACTCTAT TTTATTTTTA TTTTTTGATT AAATTTATTT GGCTCATGGG 119473 .......... .......... .......... .......... .......... .......... 301 CCGTCCCTAT CCATATTTCT CAAGCTCCAC AAATTGTTAG ACTTATTCAA ACCAGACTAA 119413 .......... .......... .......... .......... .......... .......... 301 AAAGTCCTTT TCTTAAATGA GATCAAAAAA TCATTGTCCA ACCCTATCAA GTCACGGATT 119353 .......... .......... .......... .......... .......... .......... 301 AGGCCAGCGC AGCTTAACAG ACCTATCACA TATTAACGAC TATAATTACA TAAACCAAAA 119293 .......... .......... .......... .......... .......... .......... 301 GAAATGGTTA ATTATAAACA CATAGATAAG AATTTTTTAG AAGTACAAAA CTTTATGATA 119233 .......... .......... .......... .......... .......... .......... 301 AAACTTTTTA CTTAAACAAG AAACATGATA ATTCACTGTT ACACTAAATA GTGGTGAGCT 119173 .......... .......... .......... .......... .......... .......... 301 GGTCACTAAT AACTTAAACA ATACAGAAAA TATAAAATAT AAGTAGATAG ATCAAATATG 119113 .......... .......... .......... .......... .......... .......... 301 AGCTCTAAAC TAATACTTGA ACTTTACTTT GTAATGTGAG TTCAAGGATT TGAGGTAACT 119053 .......... .......... .......... .......... .......... .......... 301 AGTTTCAATG GACATACGTT GCACGTGAAT ATTAAATCAT GTACTAAACT ATTTTTAAAA 118993 .......... .......... .......... .......... .......... .......... 301 TTAATGTCAA TATTATTAAA TTAAAAAACA AACAATTATA CGTGGAATGA TAATGTATAT 118933 .......... .......... .......... .......... .......... .......... 301 GTTTTTATGA ATAGTGGATG TAAACTTTCT TTTGATTACT ATTGAAAGTT GTCAAATCAA 118873 .......... .......... .......... .......... .......... .......... 301 CATCCAAAAA TACATATGAC TATTTTTAAT ATAAAATTTG ATATAGATAA GGTGATTTGA 118813 .......... .......... .......... .......... .......... .......... 301 CACTACCCTA TGACCTTTAA TTAAGTTTAT CTTTTTTTTG AATCTTTTCT TCATTTTATA 118753 .......... .......... .......... .......... .......... .......... 301 ATTAATTGTA ATACGTAAAA AGAAAAAGTC ACTCTTAAAA TCTCTTCGTT ATCCCTTTTA 118693 .......... .......... .......... .......... .......... .......... 301 AATATGTTTC CTCCTTCTTT TCATATAGTA TATCACTTAG TTATTATTGT ATTATTGGAG 118633 .......... .......... .......... .......... .......... .......... 301 TTCTTACTTT TAATATATAG TACAATCTAC ATAAATATTA GTATGAAATA TAGAAGATAT 118573 .......... .......... .......... .......... .......... .......... 301 ACTAAATTGG ATGTTTTTAA TTGGAATATT ATATTAATTT AATATTCATG TCAGGGAGTG 118513 .......... .......... .......... .......... .......... .......... 301 TTTAATTGAA TACTTTGAGA TTCACAACGT CTTTAAATCA CACATGAAAT TTTAACAAGA 118453 .......... .......... .......... .......... .......... .......... 301 TAAAGAATAG AAAACATAAA AAAATATAGT TTAAAATGTG AGGGAACTCC TCCATTTAAA 118393 .......... .......... .......... .......... .......... .......... 301 GTTAACAAAT AGTAGTATGA CCATTTGCAT ATTGCGCCTT ATGATAAAAC TCACAACCCT 118333 .......... .......... .......... .......... .......... .......... 301 TCGAAAAAGA TCACCACTCA TCGAAATGTC TCAACTCTTT GAAAAAGTCT TAAGCATTCA 118273 .......... .......... .......... .......... .......... .......... 301 TTGTGAAGAG GCCTTATTTT ATTATAATTT AGTATAAATA TAATATAAAA TATAGAAGAT 118213 .......... .......... .......... .......... .......... .......... 301 GTACCGAATT ATGTGTTTTA AGAAGAAGAA CAATAAAAAA ACTTTTAAAT GTTGTAGTTT 118153 .......... .......... .......... .......... .......... .......... 301 AAAATGTGAG GAAACCCCTC TTTTAAAAGC CAAAAAAGGG TAGTGTCTGA AAAAATGTTT 118093 .......... .......... .......... .......... .......... .......... 301 ATTGTGCCTT ATTAGAAAAA TCACAATTCT TCAAAAGTGT CGCAACTCAT TGGAAAACTC 118033 .......... .......... .......... .......... .......... .......... 301 ACAATTCTTG AGTGTGATAA CTTATTTTTA ATGTTATAAG TAAGATCCCG TTAAATTCAA 117973 .......... .......... .......... .......... .......... .......... 301 AACTTATAAT AAAAACAATA AAATGAGGTT CTAGCTAGGA TCAAACCCTA ATCATGCAGG 117913 .......... .......... .......... .......... .......... .......... 301 TGTATGTGTT TGCTTGTACT AGTGGTATCA AGCGCCCTTC TAGTTTTTCA TGGGCCACTA 117853 .......... .......... .......... .......... .......... .......... 301 TTCGTAATAT TGAGTTTTTT CTAGTTTCTC AAGATATTCT TGGTTTGAGA CCCCGACATA 117793 .......... .......... .......... .......... .......... .......... 301 CCTTTTTTTA GCCGGGTTCG AGGCCTTGGC GTATATCCTT AGTTATACTT TGAGGCCCTA 117733 .......... .......... .......... .......... .......... .......... 301 ACTCGTCCTT TACCCTCAAT TCATGTCCGT TCACACCTCT ATTAGTCGTG TTCGAGTTCA 117673 .......... .......... .......... .......... .......... .......... 301 AACTCTACAA TTCTTTGTGG TTTTTGTTTT GGCTTTACCA CAATTTGAAT TCGTAGAAGG 117613 .......... .......... .......... .......... .......... .......... 301 CTAAGGAAAT TCTGAAAGTG TTCTGTAGTT TTTGTAGTAG TTCCTTATCA CTTATGTGTA 117553 .......... .......... .......... .......... .......... .......... 301 TCCATCATGT TTATGGGGTC CGTTTGGATT TACTTTAAAT TATGTATGAA ATGTACCGTT 117493 .......... .......... .......... .......... .......... .......... 301 TTTGATTGTA GGGTCTAGTT AGGTTTAGCT AGCTTTATGG TTCCTTTTTT CCTTAGCCCG 117433 .......... .......... .......... .......... .......... .......... 301 TGCTCCTCTT AGTTAGGATT TTGTTATTAT TTTCATTTTA TGGTTTCGAG TTGTTTCCGT 117373 .......... .......... .......... .......... .......... .......... 301 TTCCAATTTT CATTATTTCT TTCACTTTCC AAGCTCATTC GACCTATGAT GCTACTAGGT 117313 .......... .......... .......... .......... .......... .......... 301 ACATATTATT TTGATAGTCA TACTACACTA TAAATCTGTT TATCTGATGT AGGTACGAGC 117253 .......... .......... .......... .......... .......... .......... 301 AGCAGTTGCC ATCATTGAGA TTATGTCGAT TGTGGAGACA GTTGGAGGCG AAGGCGAGCT 117193 .......... .......... .......... .......... .......... .......... 301 TATGGCATTT TGTATCATGC ATGTCTCTTT CTATTTGATT GTTGTTGTTT TTTTTCCTTT 117133 .......... .......... .......... .......... .......... .......... 301 AACATGTCTT ATAACACCCC TAAAAATAAA CTAGGTCAAA CTAGATCCTA AAATATGTGT 117073 .......... .......... .......... .......... .......... .......... 301 CATGAGTTGG TAAGGTGTAA AAATGATGAA TATAAGTGTT AGGAGTCAGT TTGAAGAGTT 117013 .......... .......... .......... .......... .......... .......... 301 TAGAAGTGAA ATGTCAAAGA ACGTCTAATA TGTTTGGAAA CTAGTTGTTG TGTGTTTTAG 116953 .......... .......... .......... .......... .......... .......... 301 TGTGACTTTA CATGTTTGAC GTGTTGTTTG GTGTCTATAT TTATAGGAAA GGAGCCTAAC 116893 .......... .......... .......... .......... .......... .......... 301 ATCTAGATAA ACATGTTTAG GATTGAAACT TTTGGGCACG ACTCTCCAAG GACCACCCTA 116833 .......... .......... .......... .......... .......... .......... 301 AGGGTCCTTG AGGAGGATCC AAACTTTGGC ATGAAACTGC CCAAGGCAGT CCCAATTGAC 116773 .......... .......... .......... .......... .......... .......... 301 GACCCGAAGC GACGCCCCGT CAAGTAGTCC ACGCCCCGTC GATGGGGGAA GTTGCTTCAC 116713 .......... .......... .......... .......... .......... .......... 301 ACTTAGGTGT GGGAGATTAA GTCCCCAAGC GATCAGTCTC TGACCAAAAC AACGGCCTGC 116653 .......... .......... .......... .......... .......... .......... 301 AGGATAGTCA ATCTTCTTGT TGACGGCCTA TAGATGCCAA CGTCGATTGA CCCCTGCAAT 116593 .......... .......... .......... .......... .......... .......... 301 TTTCTACTGG TGTCTTGACC AATCTTGGGG TATTTTGGAA AATTCATCTA AGGTCCTAAT 116533 .......... .......... .......... .......... .......... .......... 301 TAAGTCATGG ACATTTATTT TGAGTTGTTT ATGGTATATT AAGTTAGTTT ATAATCATAG 116473 .......... .......... .......... .......... .......... .......... 301 ACCTTAACTT AGACCTCATT ATTCAAAAAC AAAACCCCAA GACCAAAAGA GTTCTCTCTA 116413 .......... .......... .......... .......... .......... .......... 301 GACTCCATTG AAGCTAGGAG CAAGGTTGAG TCTAGGATTT GAATTCATCC ATTGATTCTA 116353 .......... .......... .......... .......... .......... .......... 301 CAAATTTCGT TGGTTATCTT AAATATATGT ATGGTGTTTC ATCCTTGTCT ATTATTCCAT 116293 .......... .......... .......... .......... .......... .......... 301 TCAAGAAGTC AAATTACAAA TGCTTTTCTA ATACTTTCTC AAACCATAAA GTTCTATTTT 116233 .......... .......... .......... .......... .......... .......... 301 GAATTCTAGC TATGCGTTCT TGCATAAAAG GATTTAAATA AATGTTTTAT GATATAATTG 116173 .......... .......... .......... .......... .......... .......... 301 ATGTTAATTG AATATTTTTA GATCAAAAAC TCTATGAACC CATGATTTTT ATGAATTCCT 116113 .......... .......... .......... .......... .......... .......... 301 ATATTTGGCT CTGAAGTGGG TGAATTGAAC ATAGCTTGAT CTTTGTAAAT TCATGTGTAG 116053 .......... .......... .......... .......... .......... .......... 301 GTTGTATTAA GCTATTGAAC TATGTAGAAA TCCTGATAGA ATTGTCAATA ACCTGACTTA 115993 .......... .......... .......... .......... .......... .......... 301 TAATGATTAT ATTTATAATA TATGTTGTTG GATCATGGAA TATGGATTGG TTATTGGCTT 115933 .......... .......... .......... .......... .......... .......... 301 AATATTGTGT ATATGACTAT TGGTAAGAGC ATTTGTAATG TGAATTGATT GAAAAATCTA 115873 .......... .......... .......... .......... .......... .......... 301 AGAAATGGTG TTGATAATGA TGGAAAGGTG GCGAGTTGAC CTAATTGTGT AAAATTAATT 115813 .......... .......... .......... .......... .......... .......... 301 TTGAATTGTA TTGATTGGTA ATGTCCACTT ATGGTGGCAA TGTTTATGTG TTATAATTTT 115753 .......... .......... .......... .......... .......... .......... 301 TATGAACATG GCATTGTCAA CATTAGTATA AGAATGGTGC TACATGTTGT AGCTTGTATG 115693 .......... .......... .......... .......... .......... .......... 301 GATGATCAAG GTGAAGGATG ATAATGTGTA TATGTATGTA TGAGGTTAAA GTAGGATTTC 115633 .......... .......... .......... .......... .......... .......... 301 CTCTACATGA TTATTTGTGA GTATGATGAA ATTATGATAT GTTTCTATAT GTGTTGATAG 115573 .......... .......... .......... .......... .......... .......... 301 GGTATCTTGT TAGGTAGACT TAGTTGTCCA TATATGGTGC TTGAATGTTA TTGAATATGT 115513 .......... .......... .......... .......... .......... .......... 301 GATATGATGA TGTTGTGTCT TGATTGGTAG ACTTAGGTCC TTCTACTTGA TACGTGGAAG 115453 .......... .......... .......... .......... .......... .......... 301 CTACGTGAAT GTCAACTATT GAATTAGTAG GTTTAAGTAC CTTTGTCATG TATGTGTGTG 115393 .......... .......... .......... .......... .......... .......... 301 AATGGAAATC TAGGATTGGT AGGGTACCTT CTAAGGATGA CTAATATAGG ATATTGAACA 115333 .......... .......... .......... .......... .......... .......... 301 AGTAAAGAAG GTTCAAGACA TTGAACCTTT AATATAGAAA AGAAGGTAAA TAGAAACCTT 115273 .......... .......... .......... .......... .......... .......... 301 CAAGTGAAAG ACCGTACTCA TATCCTTCTT GAGTTGATGA TGGACTTAGT CATAGGTTGG 115213 .......... .......... .......... .......... .......... .......... 301 TTGGAACGAC ATGAAATCCT TCTTGAGTTG ACTGATGGAC CTAGGGATAG GTTGACTGGA 115153 .......... .......... .......... .......... .......... .......... 301 ACGACATGAA ACCCTCTCTA AGGAAGTCAT AACAGCTATC CTTATTGACC TTGTGTGCCA 115093 .......... .......... .......... .......... .......... .......... 301 GCCCTAATGG ACCCATCCTT GGTAGGGTAT TATGATTTGG TAAGACTAAG AAATGGTACC 115033 .......... .......... .......... .......... .......... .......... 301 TTCTCATATA TCTTTATGTG AATGAACATA CTCTGTGAGA ACAAAGCTAA GCACAGAGTG 114973 .......... .......... .......... .......... .......... .......... 301 GATATGCTTG TGGTAGTGGA TTTACTTAAG ATGAGACTAG AGTACAAAGA AACCCTTGAT 114913 .......... .......... .......... .......... .......... .......... 301 ATTGCTTAAC CATGTGCCAA CATAAGATGT GTCCTAGTTC TACCCTTGGC AAGTAGAACA 114853 .......... .......... .......... .......... .......... .......... 301 CCCTTCTCGG AGTAGGGGTA GACTTCAGAT TCCATGCCTA GCTAGTGTGG TCTATGTCGG 114793 .......... .......... .......... .......... .......... .......... 301 TTAATGTCTA TTCTCATCAT GTTGGATGCA TTCTAGTGTT GGAGAAAATC TACAACGTGT 114733 .......... .......... .......... .......... .......... .......... 301 AGGTAGTGGA ATGGGACGCT ATCTATATAT GGCACATGTA GACTTTAAAA A 114682 | | || || || |||| | | | | || | | | ||| ||| | ..GGACGGGT CTGTTAC-AG ATCTGTCTTT GACAAACTCA AAATTTCAAA A 349 hqPGS_C10HBa0115K16.1-_SGN-E546251- (120488 120259) ******************************************************************************** EST sequence 257 +strand 746 n (File: SGN-E546025+) 1 TTTTTTTTTT TTAATCAATA ATCTCACGAA AAGTCTAATG ATTATCAAGA ATTTTCCAAT 61 ACAATGTTCA CCAATACGAA GTTTTAACAA TCTAAGAGTC TAACTATCAG GTGTCTAACC 121 TCAAAAATGA GGTTTTTCGA ACTATTTATA TAAAAATAAA AACCTAATTA CACAAGAATT 181 CTAATTGGTG GAAATCTGCC AAAACGCGGC TGGGTCGACG GACCATGCGA CGGACCGTCG 241 TGGTCATGAC GGACCGTCAT GGACTCCGTC GTCCCATACT TGTGCACTTT CTTCTGCTGC 301 TCTCTTCATT CCCCTCGACG GCAAGTATGA CGGACTGTCA TAGGCACAAC GGTCTGTCAA 361 GGGTCTTCGT TTCAAAATAC TTCAACTCTC GGAATCTAGG TACTGGATTA CTTCTCTGAA 421 CTCCACGACG AACCTGCAGA ACAGACCGTC ATAGCCATGA CGGACCGTCA CAAGCTTCGT 481 AATCCCACAC TTGGTCAGAC TTCCCCATCT TCCTTCAGCA ACTTCTCTAC ACTGCCACCT 541 ACGGACCGTC ACAAGCACGA CGGACCGTCA TCAGCTCCAT AGGTGGTCTC TTCTGCATTT 601 CTTCTCTCAA AATCTCCGCA TTTGGCTTTG GACAAATTTC ATGATCACTT CAGCTCGCGG 661 CTCAATCCAC ACGTCTGGAT CTTCGGNATT TTTCTTCTTT CTTATGTGTG TTGCCTTGAA 721 TGCCTCAGCT TGAGTTACTG GTCTTC Predicted gene structure (within gDNA segment 122493 to 118429): Exon 1 120800 120261 ( 540 n); cDNA 85 640 ( 556 n); score: 0.798 PPA cDNA 12 1 MATCH C10HBa0115K16.1- SGN-E546025+ 0.798 540 0.724 C PGS_C10HBa0115K16.1-_SGN-E546025+ (120800 120261) Alignment (genomic DNA sequence = upper lines): TAATAATATG A-TGTCTAAT CTCCCA-GAG TCTAACCTCA AAAATGAGGT TTTTCGAACT 120743 ||| ||| | | |||||| || || | | |||||||||| |||||||||| |||||||||| TAACAATCTA AGAGTCTAA- CTATCAGGTG TCTAACCTCA AAAATGAGGT TTTTCGAACT 143 ATTTATAAAA AAATAAAAAC CTAATTAAAG AAGGATTCTA AATTACTGGA AATCTGCCAA 120683 ||||||| || |||||||||| ||||||| | ||| ||||| |||| |||| |||||||||| ATTTATATAA AAATAAAAAC CTAATTACAC AAGAATTCT- AATTGGTGGA AATCTGCCAA 202 AACGCGGCTG GGTCGACGGA CCACGCGACG GACCGTC--- G---T---GG A----C-T-- 120639 |||||||||| |||||||||| ||| |||||| ||||||| | | || | | | AACGCGGCTG GGTCGACGGA CCATGCGACG GACCGTCGTG GTCATGACGG ACCGTCATGG 262 -C-C-GTCGT CCCATACTTG GTGCAATTTT CTTCTGTTGC TTTCTTCATT CCCCTCGACG 120582 | | ||||| ||||||||| |||| | ||| |||||| ||| | |||||||| |||||||||| ACTCCGTCGT CCCATACTT- GTGC-ACTTT CTTCTGCTGC TCTCTTCATT CCCCTCGACG 320 GCAAGTGTGA CGGACCGTCA TTAGGCACAA CGGTCCGTCA GAGGGTC-TC GTTTCAAAAT 120523 |||||| ||| ||||| |||| ||||||||| ||||| |||| |||||| || |||||||||| GCAAGTATGA CGGACTGTCA -TAGGCACAA CGGTCTGTCA -AGGGTCTTC GTTTCAAAAT 378 ACTTCAACTC TTGAAATCTG GGTACTGGGA TCACTTCTCT GATCTTCACG ACGAACCTGC 120463 |||||||||| | | ||||| |||||| ||| | |||||||| || || |||| |||||||||| ACTTCAACTC TCGGAATCTA GGTACT-GGA TTACTTCTCT GAACTCCACG ACGAACCTGC 437 AGGACGGACC GTCATAGCCA TGACGGGACC GTCGCAAGCT TCGTAATGCC ACACTTGGTC 120403 || || |||| |||||||||| |||| ||||| ||| |||||| ||||||| || |||||||||| AGAACAGACC GTCATAGCCA TGAC-GGACC GTCACAAGCT TCGTAATCCC ACACTTGGTC 496 AGACTTCCCC ATCTTCCTTC AGCAGCTTCG CTACGCTGCC ACCTACGGAC CGTCACAGGC 120343 |||||||||| |||||||||| |||| |||| |||| ||||| |||||||||| ||||||| || AGACTTCCCC ATCTTCCTTC AGCAACTTCT CTACACTGCC ACCTACGGAC CGTCACAAGC 556 ACGACGGACC ATCATAAGCT CCGTAGGTGG TCTCTTCTGC A-TT-TTCGC TCAAAATCTC 120285 |||||||||| |||| |||| || ||||||| |||||||||| | || ||| | |||||||||| ACGACGGACC GTCATCAGCT CCATAGGTGG TCTCTTCTGC ATTTCTTCTC TCAAAATCTC 616 CGCATTCAGC TTTGGACAGA TTTC 120261 |||||| || |||||||| | |||| CGCATTTGGC TTTGGACAAA TTTC 640 hqPGS_C10HBa0115K16.1-_SGN-E546025+ (120800 120261) ******************************************************************************** EST sequence 193 +strand 695 n (File: SGN-E241731+) 1 TCAGAGTTAT TTTCAATTTG TTATTACTAT TAGTTAGTCA ATTATTTCTT TAGAAAACAA 61 AGACAATAAA AAGGGGGGTT TTAGTTCTAA ATGAATGGAA ATAGCTAGCT AAATTTAAGT 121 AGGCAACTAA CAAATTCAAA TGTTGGAATT TAATCAAATA ATATAATTAA CTAGGGTTTA 181 AGTGTTCTCC ACAAGTTCCT AATTTAATAA TTCTAACTAT AACAATTCTT TCCTAGTATC 241 TTGCATACAA AGTAATAAGT TATGTATTTC TATATCCTTG GTCTTGCATC TAGAAAATAT 301 CACTACGCAC CTTGGTCCGT CTACGTGTGT TGCTATATAA ACCCTTACCA TTACCTCATA 361 TTAAGCATTG TATTCGATAT TTGACTAAGT TATTACCTCG TACCAATCAA TACTAGCCTA 421 TCAAAAAGTA TACACTAAAT TTATGTTAAT AATTCTTTTG CTATTATCTA CCTTCTTGGT 481 CCGGCAAGTA GCACTAAGGC GAGTTCTAAT GTTGACCATC CGTTAAAAAG ACTTCTAAGC 541 AAAACAATTA TCAATACATG CAAGACACTA TTCTAGAATT GTTATTTTAG TTAGATTTTA 601 CCTCATTATT CACCCATGGT TCCCACAACC ATAGTTATGT AGCTTAGTTA CCCATAGTCA 661 TAATCACAAT ATTCATATAT ATCTAATAAT AGAAT Predicted gene structure (within gDNA segment 124056 to 117832): Exon 1 121600 120914 ( 687 n); cDNA 3 689 ( 687 n); score: 0.848 MATCH C10HBa0115K16.1- SGN-E241731+ 0.848 687 0.988 C PGS_C10HBa0115K16.1-_SGN-E241731+ (121600 120914) Alignment (genomic DNA sequence = upper lines): AGACTTACCT TCAACTTGTT ATTACTATTG TTCGGTTGAT GATTTCCTTA GAAAGTAAAA 121541 ||| ||| | |||| ||||| ||||||||| | || || ||||| ||| |||| ||| AGAGTTATTT TCAATTTGTT ATTACTATTA GTTAGTCAAT TATTTCTTTA GAAAACAAAG 62 AC-ATAAAAA GGGGGTTTTG TATTTCCTAA TGAGTAAAAA TAACTAACGG ACTTGAAAGA 121482 || ||||||| ||||| ||| || ||| || ||| | ||| || ||| | | || || | ACAATAAAAA GGGGGGTTT- TAGTTCTAAA TGAATGGAAA TAGCTAGCTA AATTTAAGTA 121 GACACTTAAC AACTTTTAAT GTTGGGTTTT AATCAATTAA TCAAAGTAAC TAGGGTTTAC 121422 | || |||| || || ||| ||||| ||| |||||| ||| | || |||| ||||||||| GGCAACTAAC AAATTCAAAT GTTGGAATTT AATCAAATAA TATAATTAAC TAGGGTTTAA 181 GTGTTCCCCA CAGGTTCATA ACTTGATAAT TCTAACTATA ACAATTCTTT CCTAGTATCT 121362 |||||| ||| || |||| || | || ||||| |||||||||| |||||||||| |||||||||| GTGTTCTCCA CAAGTTCCTA ATTTAATAAT TCTAACTATA ACAATTCTTT CCTAGTATCT 241 TGCATGCAAA GTGATAAATT ATGTATTTCT AAATCCTTGG TCCGGCATCT AGAAAATCTC 121302 ||||| |||| || |||| || |||||||||| | |||||||| || |||||| ||||||| || TGCATACAAA GTAATAAGTT ATGTATTTCT ATATCCTTGG TCTTGCATCT AGAAAATATC 301 ACTCCGCACC TTGGTCTGGC TGCGTGTGTT GCTTTCCTAA CCCTTATCTT TACCTCATAT 121242 ||| |||||| |||||| | | | |||||||| ||| | || |||||| | | |||||||||| ACTACGCACC TTGGTCCGTC TACGTGTGTT GCTATATAAA CCCTTACCAT TACCTCATAT 361 TAAGCATCGT ATTCGATATT TGACTAAGTT ATTACCTCGT ACCAATCAAT ACTAGCCTAT 121182 ||||||| || |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAAGCATTGT ATTCGATATT TGACTAAGTT ATTACCTCGT ACCAATCAAT ACTAGCCTAT 421 TAGATAGCAT ACACTAAATC TATGTTAATA CTTCTTTTCC TATTATCTAC CTCCTTGGTC 121122 | | || || ||||||||| |||||||||| ||||||| | |||||||||| || ||||||| CAAAAAGTAT ACACTAAATT TATGTTAATA ATTCTTTTGC TATTATCTAC CTTCTTGGTC 481 CGACAAGTAG CATTAAGGCG AGTTCTAACG TTGATCATCC GTTAAAAAGA CTTCTAAGCG 121062 || ||||||| || ||||||| |||||||| | |||| ||||| |||||||||| ||||||||| CGGCAAGTAG CACTAAGGCG AGTTCTAATG TTGACCATCC GTTAAAAAGA CTTCTAAGCA 541 AAAGAATTAT TAATACATAC AAGACACTAT TCTAGAATTG TTCTTTTAGC TAGGGTTTAT 121002 ||| |||||| ||||||| | |||||||||| |||||||||| || |||||| ||| |||| AAACAATTAT CAATACATGC AAGACACTAT TCTAGAATTG TTATTTTAGT TAGATTTTAC 601 CTCATTATTT GCCTATGGTT CCCACAACCC TAGTTATGGA TTTTAGTTCC TCATAGCCAT 120942 ||||||||| || |||||| ||||||||| |||||||| | |||||| | ||||| ||| CTCATTATTC ACCCATGGTT CCCACAACCA TAGTTATGTA GCTTAGTTAC CCATAGTCAT 661 AAACACAATA TTCAAATATA TTAAATAA 120914 || ||||||| |||| ||||| | ||||| AATCACAATA TTCATATATA TCTAATAA 689 hqPGS_C10HBa0115K16.1-_SGN-E241731+ (121600 120914) ******************************************************************************** EST sequence 140 -strand 589 n (File: SGN-E351864-) 1 TTTATGGTAA CTAGTAGCCT GATGCAAATG CTCACTGCTA GAGGTTTGTT TTCAGGGCTA 61 CCGCCTGAGG ATCCACATGC CCAAATAGCT AAGGTAAGGG CAGTGTGTAA ATGTAGTGTG 121 GGGAGGCCTG ACATGGATCT AGATGTAATA GGGCTCACAG TGTTTCCTCT CTCACTGAAG 181 GGAGAGGCTC CTATATGGTT CACTGAGCTT CCATGCAACT CAATCTTCAC TTGGAACCAA 241 TTAAGAGATG TTTTCTTGGC ACTCTACTAT CCAATCTCGA AGAAACTAAA CCACAAAGAC 301 AGAGTAAATA ATTTTGTGGC ACTACCAGTA GAGTCAGTTA GTAGTTCTTG GGATAGATCA 361 CCTCATTCTT GAGAAGTGTT CCAAATCACT GTATAGATGA TGAGTCACGG AAGAAATAGT 421 TCTATCAGGG ACAGGATGAT AGTAACAAAG AAGTGTTGGA CATTATAGAA GGTGGATCTT 481 ATGGAGAATG CCCTTATGCT GAGATCGCTT AAAAATTAGT GAAAATCTCC CGGAATAACA 541 AAGTTTGGAG TACTAGGAAG TCTGATACAG GGAGAAACAC CTTCGAAGT Predicted gene structure (within gDNA segment 121476 to 123347): Exon 1 122122 122711 ( 590 n); cDNA 1 589 ( 589 n); score: 0.903 MATCH C10HBa0115K16.1+ SGN-E351864- 0.903 590 1.002 C PGS_C10HBa0115K16.1+_SGN-E351864- (122122 122711) Alignment (genomic DNA sequence = upper lines): TTTGTGGTAA CTAGTAGCCT GATGCAAATG CTCACTGCCA GAGGTTTGTT TTCAGGGCTA 122181 ||| |||||| |||||||||| |||||||||| |||||||| | |||||||||| |||||||||| TTTATGGTAA CTAGTAGCCT GATGCAAATG CTCACTGCTA GAGGTTTGTT TTCAGGGCTA 60 CCTTCTGAGG ATCCACATGC CCATATAGCT AAGGTTAGGG CAGTGTGTAA AAGTTGTGTG 122241 || |||||| |||||||||| ||| |||||| ||||| |||| |||||||||| | || ||||| CCGCCTGAGG ATCCACATGC CCAAATAGCT AAGGTAAGGG CAGTGTGTAA ATGTAGTGTG 120 GGGAGGCCTG ATTTGGATCT AGATGTAATA GGTCTCAGAG TGTTTCCTCT CTCACTGACG 122301 |||||||||| | ||||||| |||||||||| || |||| || |||||||||| |||||||| | GGGAGGCCTG ACATGGATCT AGATGTAATA GGGCTCACAG TGTTTCCTCT CTCACTGAAG 180 GGAGAGGCTT CTATGTGGTT TACTGAGCTC CCATACAACT CCATCTTCAC TTGGAACCAA 122361 ||||||||| |||| ||||| |||||||| |||| ||||| | |||||||| |||||||||| GGAGAGGCTC CTATATGGTT CACTGAGCTT CCATGCAACT CAATCTTCAC TTGGAACCAA 240 CTACGGGATG TCTTCTTAGC ACGCTACTAT CCGGTCTCCA AGAAATTAAA CCACAAAGAC 122421 || | |||| | ||||| || || ||||||| || |||| | ||||| |||| |||||||||| TTAAGAGATG TTTTCTTGGC ACTCTACTAT CCAATCTCGA AGAAACTAAA CCACAAAGAC 300 AGGGTGAATA ACTTTGTGGC ACTACCAGGA GAGTCAGTTA GTAGTTCTTG GGATAGATTC 122481 || || |||| | |||||||| |||||||| | |||||||||| |||||||||| ||||||| || AGAGTAAATA ATTTTGTGGC ACTACCAGTA GAGTCAGTTA GTAGTTCTTG GGATAGA-TC 359 ACGTCATTCT TGAGAAGTGT TCCAAATCAC CGTATTGATG ATGAGTCACT GAAGGAATAC 122541 || ||||||| |||||||||| |||||||||| |||| |||| ||||||||| |||| |||| ACCTCATTCT TGAGAAGTGT TCCAAATCAC TGTATAGATG ATGAGTCACG GAAGAAATAG 419 TTCTATCGGG GACAGGATAA TAACAATAAA GCAGTGTTGG ACACTATAGC AGGTGGATCT 122601 ||||||| || |||||||| | || || ||| | |||||||| ||| ||||| |||||||||| TTCTATCAGG GACAGGATGA TAGTAACAAA GAAGTGTTGG ACATTATAGA AGGTGGATCT 479 TATGGAGAAT GCCCTTATGC TGAGATTGCT GAGAAATTAG AGAAAATCTC CCGTAACAAC 122661 |||||||||| |||||||||| |||||| ||| | ||||||| ||||||||| ||| || ||| TATGGAGAAT GCCCTTATGC TGAGATCGCT TAAAAATTAG TGAAAATCTC CCGGAATAAC 539 AAAGCTTGGA GTACTAGGAA GTCCGATACA GGGAGAAACA CCTTCGCAGT 122711 |||| ||||| |||||||||| ||| |||||| |||||||||| |||||| ||| AAAGTTTGGA GTACTAGGAA GTCTGATACA GGGAGAAACA CCTTCGAAGT 589 hqPGS_C10HBa0115K16.1+_SGN-E351864- (122122 122711) ******************************************************************************** EST sequence 46 -strand 696 n (File: SGN-E395434-) 1 ATCAAATAAC TCAATCACAA GAATGGGGTT TAGAGGGAGC TCTTGCTTTC TTGAAATTCC 61 TTCATCTCTT TGGCATCTAT CACATGCTTT AACAAAATGA GGAGCATATT GATGAAGAGT 121 GGGGCAATAG TAACCACATT GTAATATCTT ATGAGTGGTT CGGATACCAC TATGATGTCC 181 ACCAATGGGT GAGGAATGGC AAGCCTCTAA AACACTCAAC ATCTCACATT CTGGCACACA 241 ACACTGAATA AGCCCTATGG CACAACTACT GTAAAAATAT GGTTCATCCC AATAGAACAA 301 CTTCACATCG TGCATGAACT TTTTTCTTTG ATGAAAGGAC AAGTCCGATG GAATAATATC 361 ACTAGCCAGA TAGTTCTCGA AATCTGCGAA CCATGTAATA AAGTCTTGTG AGGCAGCCAA 421 TACATGCTCA GACTTATACC CTAAATCTCT CATAGATTCA TCTTCTAGTT AGGACGAGTG 481 ATTGGCAACT TGATTTTTGA TTCCTTTTCT ATCCCTCACT TCAAAGTCAA ATTTGTGTAG 541 CAGTAATACC TAACGAATTA ACCTCGGTTT CACATCCTTA TTTTCCATCA AATATCTCAA 601 TGCTGAATGG TCAGTATGAA CTATAACTCT AGTACCTAGC AAATCAGAGC AAAATTTTTC 661 AAAAGCAAAG ACTACTGCAA GGAGTTCTTG CTCAGT Predicted gene structure (within gDNA segment 127015 to 125089): Exon 1 126405 125984 ( 422 n); cDNA 1 425 ( 425 n); score: 0.852 Intron 1 125983 125954 ( 30 n); Pd: 0.000 (s: 0.88), Pa: 0.000 (s: 0.48) ?? Exon 2 125953 125689 ( 265 n); cDNA 426 696 ( 271 n); score: 0.792 MATCH C10HBa0115K16.1- SGN-E395434- 0.829 687 0.987 C PGS_C10HBa0115K16.1-_SGN-E395434- (126405 125984,125953 125689) Alignment (genomic DNA sequence = upper lines): ATCAAATAAC TCAATCACAA GAATGGGGTT TAGAGGGAGC TCTTGCTTTC TTGAAATACC 126346 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||| || ATCAAATAAC TCAATCACAA GAATGGGGTT TAGAGGGAGC TCTTGCTTTC TTGAAATTCC 60 ACCATATCGT TGACATTTGT CACATGATTT AGCAAACCCA TGAGTATCTT GATGAAGAGT 126286 ||| || | || ||| | | |||||| ||| | |||| | ||| || || |||||||||| TTCATCTCTT TGGCATCTAT CACATGCTTT AACAAAATGA GGAGCATATT GATGAAGAGT 120 TGGCCAATAG TAACCACATT GCAATATCTT GTGAGCGGTT CGGATACCAC TGTGATGTCC 126226 || |||||| |||||||||| | |||||||| |||| |||| |||||||||| | |||||||| GGGGCAATAG TAACCACATT GTAATATCTT ATGAGTGGTT CGGATACCAC TATGATGTCC 180 GCCAACAGGT GAAAAATGGC TTTTCTCCAA CACACTCAAC ATTTCACATT CTGGCACACA 126166 |||| ||| || |||||| ||| || ||||||||| || ||||||| |||||||||| ACCAATGGGT GAGGAATGGC AAGCCTCTAA AACACTCAAC ATCTCACATT CTGGCACACA 240 ACGCCGAATA AGCGCGTCGG CACAACTCCT ATACAAGTAT GGTTCATCCC -A-A-AAGAA 126109 || | ||||| ||| | || ||||||| || || || ||| |||||||||| | | || || ACACTGAATA AGCCCTATGG CACAACTACT GTAAAAATAT GGTTCATCCC AATAGAACAA 300 CTTCACATCG TACATGAACT TTTTCCTTTG ATGAAAGGAC AAGTCTGATG GAACAATATC 126049 |||||||||| | |||||||| |||| ||||| |||||||||| ||||| |||| ||| |||||| CTTCACATCG TGCATGAACT TTTTTCTTTG ATGAAAGGAC AAGTCCGATG GAATAATATC 360 ACTAGCCAGA TAGTTCGCAA AATTTGCGAA CCATGGAATC AAGTCTTGTG AAGCAGCCAA 125989 |||||||||| |||||| | | ||| |||||| ||||| ||| |||||||||| | |||||||| ACTAGCCAGA TAGTTCTCGA AATCTGCGAA CCATGTAATA AAGTCTTGTG AGGCAGCCAA 420 TACATGTTCA TCGGGGAAAG TATCATCAAT GTCAG--T-- -A-TTATCCC CTAACTCTCT 125935 ||||| | | |||| || |||| ||||| TACAT..... .......... .......... .....GCTCA GACTTATACC CTAAATCTCT 450 CATAGCTTCA TCCTCTAGAC GAGACAAATG ATCAGCAACT TGATTTTCAG TCCCTTTTCT 125875 ||||| |||| || ||||| ||| | || || |||||| ||||||| | |||||||| CATAGATTCA TCTTCTAGTT AGGACGAGTG ATTGGCAACT TGATTTTTGA TTCCTTTTCT 510 ATGCAGCACT TCAAAGTCAA ATTCTTGCTG CAGTAATACC CAACGAATAA GCCTTGGTTT 125815 || | |||| |||||||||| ||| || | |||||||||| ||||||| | ||| ||||| ATCCCTCACT TCAAAGTCAA ATTTGTGTAG CAGTAATACC TAACGAATTA ACCTCGGTTT 570 CGCATCCTTT TTCGCCATCA AATATCTCAA TACTGAATGG TCAGTATGCA CTATAACTCT 125755 | ||||||| || |||||| |||||||||| | |||||||| |||||||| | |||||||||| CACATCCTTA TTTTCCATCA AATATCTCAA TGCTGAATGG TCAGTATGAA CTATAACTCT 630 AGTACCTAGC AAATAGAAGT GAAATTTCTC AAAAGCAAAG ACTACTGCGA GGAGTTCTTG 125695 |||||||||| |||| || |||||| || |||||||||| |||||||| | |||||||||| AGTACCTAGC AAATCAGAGC AAAATTTTTC AAAAGCAAAG ACTACTGCAA GGAGTTCTTG 690 CTCAGT 125689 |||||| CTCAGT 696 hqPGS_C10HBa0115K16.1-_SGN-E395434- (126405 125984,125953 125689) ******************************************************************************** EST sequence 38 -strand 487 n (File: SGN-E205922-) 1 AAAACACTCA ACATCTCACA TTCTGGCACA CAACACTGAA TAAGCCCTAT GGCACAACTA 61 CTGTAAAAAT ATGGTTCATC CCAATAGAAC AACTTCACAT CGTGCATGAA CTTTTTTCTT 121 TGATGAAAGG ACAAGTCCGA TGGAATAATA TCACTAGCCA GATAGTTCTC GAAATCTGCG 181 AACCATGTAA TAAAGTCTTG TGAGGCAGCC AATACATGCT CAGACTTATA CCCTAAATCT 241 CTCATAGATT CATCTTCTAG TTAGGACGAG TGATTGGCAA CTTGATTTTT GATTCCTTTT 301 CTATCCCTCA CTTCAAAGTC AAATTTGTGT AGCAGTAATA CCTAACGAAT TAACCTCGGT 361 TTCACATCCT TATTTTCCAT CAAATATCTC AATGCTGAAT GGTCAGTATG AACTATAACT 421 ATAGTACCTA GCAAATCAGA GCAAAATCTT TCAAAAGCAA AGACTACTGC AAGGAGTTCT 481 TGCTCAG Predicted gene structure (within gDNA segment 127863 to 125090): Exon 1 126197 125984 ( 214 n); cDNA 1 217 ( 217 n); score: 0.857 Intron 1 125983 125954 ( 30 n); Pd: 0.000 (s: 0.88), Pa: 0.000 (s: 0.48) ?? Exon 2 125953 125690 ( 264 n); cDNA 218 487 ( 270 n); score: 0.784 MATCH C10HBa0115K16.1- SGN-E205922- 0.817 478 0.982 C PGS_C10HBa0115K16.1-_SGN-E205922- (126197 125984,125953 125690) Alignment (genomic DNA sequence = upper lines): AACACACTCA ACATTTCACA TTCTGGCACA CAACGCCGAA TAAGCGCGTC GGCACAACTC 126138 || ||||||| |||| ||||| |||||||||| |||| | ||| ||||| | ||||||||| AAAACACTCA ACATCTCACA TTCTGGCACA CAACACTGAA TAAGCCCTAT GGCACAACTA 60 CTATACAAGT ATGGTTCATC CC-A-A-AAG AACTTCACAT CGTACATGAA CTTTTTCCTT 126081 || || || | |||||||||| || | | || |||||||||| ||| |||||| |||||| ||| CTGTAAAAAT ATGGTTCATC CCAATAGAAC AACTTCACAT CGTGCATGAA CTTTTTTCTT 120 TGATGAAAGG ACAAGTCTGA TGGAACAATA TCACTAGCCA GATAGTTCGC AAAATTTGCG 126021 |||||||||| ||||||| || ||||| |||| |||||||||| |||||||| | |||| |||| TGATGAAAGG ACAAGTCCGA TGGAATAATA TCACTAGCCA GATAGTTCTC GAAATCTGCG 180 AACCATGGAA TCAAGTCTTG TGAAGCAGCC AATACATGTT CATCGGGGAA AGTATCATCA 125961 ||||||| || | |||||||| ||| |||||| ||||||| AACCATGTAA TAAAGTCTTG TGAGGCAGCC AATACAT... .......... .......... 217 ATGTCAG--T ---A-TTATC CCCTAACTCT CTCATAGCTT CATCCTCTAG ACGAGACAAA 125907 | | |||| |||||| ||| ||||||| || |||| ||||| ||| | .......GCT CAGACTTATA CCCTAAATCT CTCATAGATT CATCTTCTAG TTAGGACGAG 270 TGATCAGCAA CTTGATTTTC AGTCCCTTTT CTATGCAGCA CTTCAAAGTC AAATTCTTGC 125847 |||| |||| ||||||||| | |||||| |||| | || |||||||||| ||||| || TGATTGGCAA CTTGATTTTT GATTCCTTTT CTATCCCTCA CTTCAAAGTC AAATTTGTGT 330 TGCAGTAATA CCCAACGAAT AAGCCTTGGT TTCGCATCCT TTTTCGCCAT CAAATATCTC 125787 ||||||||| || ||||||| | ||| ||| ||| |||||| | || |||| |||||||||| AGCAGTAATA CCTAACGAAT TAACCTCGGT TTCACATCCT TATTTTCCAT CAAATATCTC 390 AATACTGAAT GGTCAGTATG CACTATAACT CTAGTACCTA GCAAATAGAA GTGAAATTTC 125727 ||| |||||| |||||||||| ||||||||| ||||||||| |||||| | | |||| | AATGCTGAAT GGTCAGTATG AACTATAACT ATAGTACCTA GCAAATCAGA GCAAAATCTT 450 TCAAAAGCAA AGACTACTGC GAGGAGTTCT TGCTCAG 125690 |||||||||| |||||||||| ||||||||| ||||||| TCAAAAGCAA AGACTACTGC AAGGAGTTCT TGCTCAG 487 hqPGS_C10HBa0115K16.1-_SGN-E205922- (126197 125984,125953 125690) ******************************************************************************** EST sequence 123 +strand 734 n (File: SGN-E577717+) 1 CTCTATGACT CTAGTACCTA GCAAATAGGA GCAAAATATC TCAAAAGCAA AGACTACTGC 61 GAGGAGTTCA TGCTCAGTCA CTGTGTAGTT CTTCTGGGCT TCATTTAGGG CTTTACTAGC 121 ATAGTAAATT GGGTGAAGGA TTTTGTTTCT TCTCTGTCCC AATACTACAC CAAGAGCCAC 181 CCCACTAGCA TCGCACATTA CCTCAAATGG ACTTTTCCAA TCCGGAGAAA TAATGATAGG 241 TGCAGACACT AACTTCTCTT TTAGCTCACT GAATGCTTTA AGACAGGACT CATCAAAACA 301 AAATTTACAT TCTTTCTTCA GTAATTTGCA CAATGGGTGT GCAATCTTTG AAAAGTCTTT 361 GATGAATCTC CGATAAAAAC CTGCATGCCC AAGAAAGCTT CTCACACCTT TCATAGAGAT 421 CGGTGGGGGA AGTCTCTCTA TTACCTCAAC TTTAGCTCGA TCAACCTCTA TTCCCTTTTC 481 TGAAATGCGA TGACCCAACA CAATACCTTT TTTTACCATG AAATGACACT TTTCCCAGTT 541 TAGTACCAGA TTGCAGTCTT CACATCTCTT AAGAACCTCA GATTAATTGG TCAAGCATCG 601 CTCAATTGAA TCACCAACCA CAGAAAAATC ATCCATAAAA ACCTCTATAG TATCCTCCAC 661 CATGTCAGAA AATATTGACA TCATATATCT CTGAAAGGTT GCGGGTGCAT TGCACAACCT 721 AAATGGCATT CTTC Predicted gene structure (within gDNA segment 126429 to 124288): Exon 1 125764 125033 ( 732 n); cDNA 3 734 ( 732 n); score: 0.949 MATCH C10HBa0115K16.1- SGN-E577717+ 0.949 732 0.997 C PGS_C10HBa0115K16.1-_SGN-E577717+ (125764 125033) Alignment (genomic DNA sequence = upper lines): CTATAACTCT AGTACCTAGC AAATAGAAGT GAAATTTCTC AAAAGCAAAG ACTACTGCGA 125705 |||| ||||| |||||||||| |||||| || |||| |||| |||||||||| |||||||||| CTATGACTCT AGTACCTAGC AAATAGGAGC AAAATATCTC AAAAGCAAAG ACTACTGCGA 62 GGAGTTCTTG CTCAGTCACT GTGTAGTTCT TCTGGGCTTC ATTTAGGGCT TTACTAGCAT 125645 ||||||| || |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGAGTTCATG CTCAGTCACT GTGTAGTTCT TCTGGGCTTC ATTTAGGGCT TTACTAGCAT 122 AGTAAATTGG GTGAAGGATT TTGTTTCTTC TCTGTCCCAA TACTACACCA AGAGCCACCC 125585 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGTAAATTGG GTGAAGGATT TTGTTTCTTC TCTGTCCCAA TACTACACCA AGAGCCACCC 182 CACTGGCATC ACACATTACC TCAAATGGAC TGTTCCAATC CGGAGAAATA ATGATAGGTA 125525 |||| ||||| ||||||||| |||||||||| | |||||||| |||||||||| ||||||||| CACTAGCATC GCACATTACC TCAAATGGAC TTTTCCAATC CGGAGAAATA ATGATAGGTG 242 CAGACCCTAA CTTCTCTTTT AGCTCACCGA ACACTTTAAG ACAGGATTCA TCAAAACAAA 125465 ||||| |||| |||||||||| ||||||| || | ||||||| |||||| ||| |||||||||| CAGACACTAA CTTCTCTTTT AGCTCACTGA ATGCTTTAAG ACAGGACTCA TCAAAACAAA 302 ATTTACATTC TTTCTCCAGC AATTTGCACA ATGAGTGTGC AATCTTTGAA ATGTCTTTGA 125405 |||||||||| ||||| ||| |||||||||| ||| |||||| |||||||||| | |||||||| ATTTACATTC TTTCTTCAGT AATTTGCACA ATGGGTGTGC AATCTTTGAA AAGTCTTTGA 362 TGAATCTCCG ATAAAAACCT GCATGCCCAA GAAAGCTTCT CACACCTTTT ACAGAGATCG 125345 |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| | |||||||| TGAATCTCCG ATAAAAACCT GCATGCCCAA GAAAGCTTCT CACACCTTTC ATAGAGATCG 422 GCGGGGGAAG TCTCTCTATT ACCTCAACTT TAGCTCGATC AACCTCTATG CCCTTTTCTG 125285 | |||||||| |||||||||| |||||||||| |||||||||| ||||||||| |||||||||| GTGGGGGAAG TCTCTCTATT ACCTCAACTT TAGCTCGATC AACCTCTATT CCCTTTTCTG 482 AAATGCGATG ACCTAACACA GTACCCTCTT TCACCATGAA ATGACACTTT TCCCAGTTTA 125225 |||||||||| ||| |||||| |||| | || | |||||||| |||||||||| |||||||||| AAATGCGATG ACCCAACACA ATACCTTTTT TTACCATGAA ATGACACTTT TCCCAGTTTA 542 GTACCAAATT GCAGTCTTCA CATCTCTTAA GAACCTCAGA TAAATTGGTC AAGCACTGCT 125165 |||||| ||| |||||||||| |||||||||| |||||||||| | |||||||| ||||| ||| GTACCAGATT GCAGTCTTCA CATCTCTTAA GAACCTCAGA TTAATTGGTC AAGCATCGCT 602 CGAATGAATC ACCAACCACA GAAAAATCAT CCATAAAAAC CTCTATAGTA TCCTCCACCA 125105 | | |||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAATTGAATC ACCAACCACA GAAAAATCAT CCATAAAAAC CTCTATAGTA TCCTCCACCA 662 TGTCAGAAAA TATTGACATC ATACATCTCT GAAAGGTTGC GGGTGCATTG CACAACCCAA 125045 |||||||||| |||||||||| ||| |||||| |||||||||| |||||||||| ||||||| || TGTCAGAAAA TATTGACATC ATATATCTCT GAAAGGTTGC GGGTGCATTG CACAACCTAA 722 ATGACATTCT TC 125033 ||| |||||| || ATGGCATTCT TC 734 hqPGS_C10HBa0115K16.1-_SGN-E577717+ (125764 125033) ******************************************************************************** EST sequence 245 +strand 719 n (File: SGN-E356787+) 1 TTTACTTCAT AGTCAAATTC TTGTAACAGT AATACCCAAC CAATCAACCT CGGTTTTGCA 61 TCCTTCTTTG CCATCAAATA TCTCAATGTT GAATGGTCAG TATGCACTAT AACTCTAGTA 121 CCTAGCAAAT AGGAGCAAAA TTTTTTGAAA GGAAAGACTA ATGTAAGGAG TTCTTGCTCA 181 GTCACTGTGT AGTTCTTGTG AGCTTCATTT AGGGCTTTAC TAGCATAGTA AATGGGGTGA 241 AGATTTTGTT CTTTATTTGT CCCAATACTA CACCAAGAGC AACCCCACTA GCATCGCACA 301 TCACCTCAAA TGGACTATTC CAATCCAGAG AAATAATGAT AGGTGTAGAC ACCAATTTTT 361 CTTTTAGATC GTCAAATGCT TTAAGACACG ATTCATCAAA ACAAAATTTA CAATCTTTCT 421 CCAGCAGTTT GCACAACGGA TGTGCAATCT TTGATGAATC TTCGGTAAAA ACCTACATGC 481 CCAAGAAAGC TTATCACACC TTTTACAGAG ATAGGTGGGG GAAGTCTCTC TATTACCTCG 541 ACTTTAACTC GATCAACCTC TATGCACTTT TCTGAAATGC GATGACCCAA AACAATACCT 601 TCTTTCACCA TGAAATGGCA TTTTTCCCAA TTTAGTACTA AATTACAGTC TTCACATCTC 661 TTAAGGACCT CAGGTAAATT GTTCAAACAC CGCTCGAATG AATCACCAAC CGCAGAAAA Predicted gene structure (within gDNA segment 127091 to 123612): Exon 1 125867 125140 ( 728 n); cDNA 4 719 ( 716 n); score: 0.876 MATCH C10HBa0115K16.1- SGN-E356787+ 0.876 728 1.013 C PGS_C10HBa0115K16.1-_SGN-E356787+ (125867 125140) Alignment (genomic DNA sequence = upper lines): ACTTCAAAGT CAAATTCTTG CTGCAGTAAT ACCCAACGAA TAAGCCTTGG TTTCGCATCC 125808 |||||| ||| |||||||||| ||||||| ||||||| || | | ||| || ||| |||||| ACTTCATAGT CAAATTCTTG TAACAGTAAT ACCCAACCAA TCAACCTCGG TTTTGCATCC 63 TTTTTCGCCA TCAAATATCT CAATACTGAA TGGTCAGTAT GCACTATAAC TCTAGTACCT 125748 || || |||| |||||||||| |||| |||| |||||||||| |||||||||| |||||||||| TTCTTTGCCA TCAAATATCT CAATGTTGAA TGGTCAGTAT GCACTATAAC TCTAGTACCT 123 AGCAAATAGA AGTGAAATTT CTCAAAAGCA AAGACTACTG CGAGGAGTTC TTGCTCAGTC 125688 ||||||||| || |||||| | |||| | ||||||| || |||||||| |||||||||| AGCAAATAGG AGCAAAATTT TTTGAAAGGA AAGACTAATG TAAGGAGTTC TTGCTCAGTC 183 ACTGTGTAGT TCTTCTGGGC TTCATTTAGG GCTTTACTAG CATAGTAAAT TGGGTGAAGG 125628 |||||||||| |||| || || |||||||||| |||||||||| |||||||||| ||||||| | ACTGTGTAGT TCTTGTGAGC TTCATTTAGG GCTTTACTAG CATAGTAAAT GGGGTGAA-G 242 ATTTTGTTTC TTCTCTGTCC CAATACTACA CCAAGAGCCA CCCCACTGGC ATCACACATT 125568 |||||||| || | ||||| |||||||||| |||||||| | ||||||| || ||| ||||| ATTTTGTTCT TTATTTGTCC CAATACTACA CCAAGAGCAA CCCCACTAGC ATCGCACATC 302 ACCTCAAATG GACTGTTCCA ATCCGGAGAA ATAATGATAG GTACAGACCC TAACTTCTCT 125508 |||||||||| |||| ||||| |||| ||||| |||||||||| || |||| | || || ||| ACCTCAAATG GACTATTCCA ATCCAGAGAA ATAATGATAG GTGTAGACAC CAATTTTTCT 362 TTTAGCTCAC CGAACACTTT AAGACAGGAT TCATCAAAAC AAAATTTACA TTCTTTCTCC 125448 ||||| || | || |||| |||||| ||| |||||||||| |||||||||| ||||||||| TTTAGATCGT CAAATGCTTT AAGACACGAT TCATCAAAAC AAAATTTACA ATCTTTCTCC 422 AGCAATTTGC ACAATGAGTG TGCAATCTTT GAAATGTCTT TGATGAATCT CCGATAAAAA 125388 |||| ||||| || | | | | | | | | || |||| |||||||||| || |||||| AGCAGTTTGC AC-A--A-CG -G--A--TGT GCAA--TCTT TGATGAATCT TCGGTAAAAA 471 CCTGCATGCC CAAGAAAGCT TCTCACACCT TTTACAGAGA TCGGCGGGGG AAGTCTCTCT 125328 ||| |||||| |||||||||| | |||||||| |||||||||| | || ||||| |||||||||| CCTACATGCC CAAGAAAGCT TATCACACCT TTTACAGAGA TAGGTGGGGG AAGTCTCTCT 531 ATTACCTCAA CTTTAGCTCG ATCAACCTCT ATGCCCTTTT CTGAAATGCG ATGACCTAAC 125268 |||||||| | ||||| |||| |||||||||| |||| ||||| |||||||||| |||||| || ATTACCTCGA CTTTAACTCG ATCAACCTCT ATGCACTTTT CTGAAATGCG ATGACCCAAA 591 ACAGTACCCT CTTTCACCAT GAAATGACAC TTTTCCCAGT TTAGTACCAA ATTGCAGTCT 125208 ||| |||| | |||||||||| |||||| || |||||||| | ||||||| || ||| |||||| ACAATACCTT CTTTCACCAT GAAATGGCAT TTTTCCCAAT TTAGTACTAA ATTACAGTCT 651 TCACATCTCT TAAGAACCTC AGATAAATTG GTCAAGCACT GCTCGAATGA ATCACCAACC 125148 |||||||||| |||| ||||| || ||||||| |||| ||| |||||||||| |||||||||| TCACATCTCT TAAGGACCTC AGGTAAATTG TTCAAACACC GCTCGAATGA ATCACCAACC 711 ACAGAAAA 125140 ||||||| GCAGAAAA 719 hqPGS_C10HBa0115K16.1-_SGN-E356787+ (125867 125140) ******************************************************************************** EST sequence 63 -strand 586 n (File: SGN-E543103-) 1 GGCAGCCATG GAAATGGAGA AAATCAACCA TGCAACTCTT GACCAGCAGC TGCAAAGAAT 61 TTGGTTTGAT TAATAGCTTG AGCAGTAAAT ATTGGACGTG CGGCTCGACT ATACGGTGTA 121 GACGCTCAGT TCGGTGATCC TCCCGCCTAG GATATCTACT TTGCTGAGTG GGAGAGCTCC 181 ACTGTTTCGT AGCCCAGTCA TTTTGGTACA TAACTTTTTG TGTAGTCTTT TGCTTGTCTA 241 TGGGTATGGT GGGGCCCTGT CCCGTCGAGT TTCACTACTA TACTCTTAGA GGTCCATAGA 301 CATCGCGTGG GTTGTATATA TATGTTTTGG ATAATGGTCT GGACATGGTT TGTTTGGGAT 361 GTCCACTTGT ACAAGGGCAG CCTTGTCAGC TGCGTACATC TTTGTGTATT GTGTAGTGGC 421 AGCCTTGTCG GCTGCGTATG CTATTATGCT TTGGATAGTG GCGGCCTTGT CGGCTCGCGT 481 ATGTTGTTAC GGTTGAATGG TTATGACTCC TTATGAGACA GATCCACTTT ATATATATAT 541 ATATGGCGTT GGGGTTGGCG TGATTGATAA AAAAAAGGGG GGCCCG Predicted gene structure (within gDNA segment 129126 to 125459): Exon 1 128468 128400 ( 69 n); cDNA 1 68 ( 68 n); score: 0.862 Intron 1 128399 127846 ( 554 n); Pd: 0.900 (s: 0.86), Pa: 0.868 (s: 0.98) Exon 2 127845 127799 ( 47 n); cDNA 69 115 ( 47 n); score: 0.979 Intron 2 127798 127072 ( 727 n); Pd: 0.991 (s: 0.98), Pa: 0.000 (s: 0.96) Exon 3 127071 126739 ( 333 n); cDNA 116 448 ( 333 n); score: 0.899 Intron 3 126738 126621 ( 118 n); Pd: 0.404 (s: 0.82), Pa: 0.922 (s: 0) Exon 4 126620 126596 ( 25 n); cDNA 449 473 ( 25 n); score: 0.560 MATCH C10HBa0115K16.1- SGN-E543103- 0.893 474 0.809 C PGS_C10HBa0115K16.1-_SGN-E543103- (128468 128400,127845 127799,127071 126739,126620 126596) Alignment (genomic DNA sequence = upper lines): GGCAGCCATG GAAATGGAG- AAACCAACCC TGCAACTCTT GGCCAGCAGC TGCAAATAAT 128410 |||||||||| ||||||||| ||| ||||| |||||||||| | |||||||| |||||| ||| GGCAGCCATG GAAATGGAGA AAATCAACCA TGCAACTCTT GACCAGCAGC TGCAAAGAAT 60 TTGGTTAGTA ATCTCCTTGT TTGGTGTGTT AATTCTTTAG AATACCCTTG TTAATTATCC 128350 |||||| | TTGGTT--TG .......... .......... .......... .......... .......... 68 ATTAATTTTA AGAAGGGGGC GTGACCAGTA GCTTAGGAAG TTTGTTTTAG TTATTGAATG 128290 .......... .......... .......... .......... .......... .......... 68 TACTAAGTAT GAATGGAAAC CATAATCGGA TTATTAGTGG TGTCGTGTTG GTGCTTGGGC 128230 .......... .......... .......... .......... .......... .......... 68 TGTTTTGATT AAAGCAAACT GCAGGAAAAT TCTGTTTTGG CATTATGTAT ATGTTGAATG 128170 .......... .......... .......... .......... .......... .......... 68 TGATTATGAG TATATACTCC AAAGGATGAA TACGATAAGG TAGATGTGTT ACGAATTATA 128110 .......... .......... .......... .......... .......... .......... 68 AAACGAGTTA TCACTCGGTG TGTCATTGCT TCGCTGATAT AGTTGCCGAG ATGGAACTGT 128050 .......... .......... .......... .......... .......... .......... 68 TTTGGGGAGG GGGCTGTTTA ATATGATTCT TTGGGTTATA TGTGTTATTG GTATTGTTGT 127990 .......... .......... .......... .......... .......... .......... 68 GGATAATTTG GATTGTTGTC GGATTGGGAC GAAGTAAGGA AAATAGGGGA GGTGCTGCCG 127930 .......... .......... .......... .......... .......... .......... 68 AATTTTCGTT AGATTATTAG CTAGCTTACA AGAAAGTAAA GCACGATGTT TATCTAATTG 127870 .......... .......... .......... .......... .......... .......... 68 CGGCACGATT GTTGCTTGTT ATAGATTAAT AGCTTGAGCA GTAAATATTG GACGTGCGGC 127810 |||||| |||||||||| |||||||||| |||||||||| .......... .......... ....ATTAAT AGCTTGAGCA GTAAATATTG GACGTGCGGC 104 TCGATTATAC GGTATGTAAC GCTGTCCCTT CTTTCTTTGC TTGGCATGAC TTTTAAAAAT 127750 |||| ||||| | TCGACTATAC G......... .......... .......... .......... .......... 115 AAGCGAATAA CGGACAGATT TGATACTTAC CTCTAAAGCG TCTAGGTGAT GTATATTCTT 127690 .......... .......... .......... .......... .......... .......... 115 GCTTCCACAA TTATTCCTCT ATATATCGGT TATGTCTAAG GCTATGATGA TCTCTAATAT 127630 .......... .......... .......... .......... .......... .......... 115 CTATGGTAAT GCTTCTTAGA GTCATTGAAA TTTTACGTTT TCATATCGTA TTAAAGGTTC 127570 .......... .......... .......... .......... .......... .......... 115 ATAATCTTGA TAAAACATTA ATCTTTGGTA ATACTCCTTG CTGGTTCACG TTGATTGTTC 127510 .......... .......... .......... .......... .......... .......... 115 TATTGAGTTA TAAGAAATGA TTTTAATTGC ATATGGTTGC TCACAATATT CTGCTCGTGC 127450 .......... .......... .......... .......... .......... .......... 115 ATAGAGTCAT TTATCATTTC ACCGAGTCCC GGGCCGGGTA ATGTTCGTGC GGAGTTTCTT 127390 .......... .......... .......... .......... .......... .......... 115 GCATATGTCA CCGAGTTCCT CACTAGAGGG CCGGGTATGT ATATTATATA TATGATTGGT 127330 .......... .......... .......... .......... .......... .......... 115 GATGAGGATG GTTATGATGA TGATGATGAC GGAGATGACG TGATGATTAT TTTGCCGAGC 127270 .......... .......... .......... .......... .......... .......... 115 CCCTTACTAG GGAAGCTGGG CACCTTAAAT GTTAAATATA TGCATGATTT TCACTTAAAA 127210 .......... .......... .......... .......... .......... .......... 115 AGTATATGTG TAGCGATATT TGTTTCGAGT TGCCACATTG GTATCCTGTC ATCTTTACCT 127150 .......... .......... .......... .......... .......... .......... 115 TATGCTTTAC ATACTCAGTA CATTGGTCCG TACTGGACCC CCCCTTTCCT CGGGGGGGCT 127090 .......... .......... .......... .......... .......... .......... 115 GCGTTTCATG CCCGCAGGGT GTAGACGCGC AGTTCGGTGA TCCTCCCGCC TAGGATATCT 127030 || |||||||| | |||||||||| |||||||||| |||||||||| .......... ........GT GTAGACGCTC AGTTCGGTGA TCCTCCCGCC TAGGATATCT 157 ACTCTGCTGA TTGGGAGAGC TCCACTGTTC CGGAGCCCAT TCGTTTTGGT ACATAAC-TT 126971 ||| |||||| ||||||||| ||||||||| || |||||| || ||||||| ||||||| || ACTTTGCTGA GTGGGAGAGC TCCACTGTTT CGTAGCCCAG TCATTTTGGT ACATAACTTT 217 TTGTGTAGTC TTTTGCTCGT CTATGGGTAT GGCGGGGCCC TGTCCCGTCG AGTTTCACTA 126911 |||||||||| ||||||| || |||||||||| || ||||||| |||||||||| |||||||||| TTGTGTAGTC TTTTGCTTGT CTATGGGTAT GGTGGGGCCC TGTCCCGTCG AGTTTCACTA 277 ATGTACCCTT AGAGGTCTGT GGACATTATG TGGGTTGTAT ATATATGTTT TGGATAATGG 126851 | ||| ||| ||||||| | ||||| | |||||||||| |||||||||| |||||||||| CTATACTCTT AGAGGTCCAT AGACATCGCG TGGGTTGTAT ATATATGTTT TGGATAATGG 337 TCTGGACATG GTTTGTTTGG GATGTCCGCT TGTACAGGGG CAGCCTTGTC GGCTGTGTAC 126791 |||||||||| |||||||||| ||||||| || |||||| ||| |||||||||| |||| |||| TCTGGACATG GTTTGTTTGG GATGTCCACT TGTACAAGGG CAGCCTTGTC AGCTGCGTAC 397 ATCATTATGC TTTGAATAGT GGCGGCCTTG TCGGCTCGCG TATGCTGTTA TGGTTAAATG 126731 ||| || || ||| |||| ||| |||||| |||||| ||| |||||| ||| || ATCTTTGTGT ATTGTGTAGT GGCAGCCTTG TCGGCT-GCG TATGCTATTA TG........ 448 GTTATGACTC CTTATGAGAC AGGTCCTCTT ATATATATAT ATGACGTTGG GGTTGGCTTG 126671 .......... .......... .......... .......... .......... .......... 448 ATTTGATTAA ATTCCATATT GTCTTAGTTT CAGTTGGTCA TACTTAGCAG GTTTGTATGT 126611 |||| || .......... .......... .......... .......... .......... CTTTGGATAG 458 CGGTGTCCAA AACGG 126596 || | || ||| TGGCGGCCTT GTCGG 473 hqPGS_C10HBa0115K16.1-_SGN-E543103- (128468 128400,127845 127799,127071 126739,126620 126596) ******************************************************************************** EST sequence 227 +strand 577 n (File: SGN-E543104+) 1 GGCAGCCATG GAAATGGAGA AAATCAACCA TGCAACTCTT GACCAGCAGC TGCAAAGAAT 61 TTGGTTTGAT TAATAGCTTG AGCAGTAAAT ATTGGACGTG CGGCTCGACT ATACGGTGTA 121 GACGCTCAGT TCGGTGATCC TCCCGCCTAG GATATCTACT TTGCTGAGTG GGAGAGCTCC 181 ACTGTTTCGT AGCCCAGTCA TTTTGGTACA TAACTTTTTG TGTAGTCTTT TGCTTGTCTA 241 TGGGTATGGT GGGGCCCTGT CCCGTCGAGT TTCACTACTA TACTCTTAGA GGTCCATAGA 301 CATCGCGTGG GTTGTATATA TATGTTTTGG ATAATGGTCT GGACATGGTT TGTTTGGGAT 361 GTCCACTTGT ACAAGGGCAG CCTTGTCAGC TGCGTACATC TTTGTGTATT GTGTAGTGGC 421 AGCCTTGTCG GCTGCGTATG CTATTATGCT TTGGATAGTG GCGGCCTTGT CGGCTCGCGT 481 ATGTTGTTAC GGTTGAATGG TTATGACTCC TTATGAGACA GATCCACTTT ATATATATAT 541 ATATGGCGAT GGGGTTGGCT TGATTTGATT AAAAAAA Predicted gene structure (within gDNA segment 129116 to 125539): Exon 1 128468 128400 ( 69 n); cDNA 1 68 ( 68 n); score: 0.862 Intron 1 128399 127846 ( 554 n); Pd: 0.900 (s: 0.86), Pa: 0.868 (s: 0.98) Exon 2 127845 127799 ( 47 n); cDNA 69 115 ( 47 n); score: 0.979 Intron 2 127798 127072 ( 727 n); Pd: 0.991 (s: 0.98), Pa: 0.000 (s: 0.96) Exon 3 127071 126739 ( 333 n); cDNA 116 448 ( 333 n); score: 0.899 Intron 3 126738 126621 ( 118 n); Pd: 0.404 (s: 0.82), Pa: 0.922 (s: 0) Exon 4 126620 126596 ( 25 n); cDNA 449 473 ( 25 n); score: 0.560 MATCH C10HBa0115K16.1- SGN-E543104+ 0.893 474 0.821 C PGS_C10HBa0115K16.1-_SGN-E543104+ (128468 128400,127845 127799,127071 126739,126620 126596) Alignment (genomic DNA sequence = upper lines): GGCAGCCATG GAAATGGAG- AAACCAACCC TGCAACTCTT GGCCAGCAGC TGCAAATAAT 128410 |||||||||| ||||||||| ||| ||||| |||||||||| | |||||||| |||||| ||| GGCAGCCATG GAAATGGAGA AAATCAACCA TGCAACTCTT GACCAGCAGC TGCAAAGAAT 60 TTGGTTAGTA ATCTCCTTGT TTGGTGTGTT AATTCTTTAG AATACCCTTG TTAATTATCC 128350 |||||| | TTGGTT--TG .......... .......... .......... .......... .......... 68 ATTAATTTTA AGAAGGGGGC GTGACCAGTA GCTTAGGAAG TTTGTTTTAG TTATTGAATG 128290 .......... .......... .......... .......... .......... .......... 68 TACTAAGTAT GAATGGAAAC CATAATCGGA TTATTAGTGG TGTCGTGTTG GTGCTTGGGC 128230 .......... .......... .......... .......... .......... .......... 68 TGTTTTGATT AAAGCAAACT GCAGGAAAAT TCTGTTTTGG CATTATGTAT ATGTTGAATG 128170 .......... .......... .......... .......... .......... .......... 68 TGATTATGAG TATATACTCC AAAGGATGAA TACGATAAGG TAGATGTGTT ACGAATTATA 128110 .......... .......... .......... .......... .......... .......... 68 AAACGAGTTA TCACTCGGTG TGTCATTGCT TCGCTGATAT AGTTGCCGAG ATGGAACTGT 128050 .......... .......... .......... .......... .......... .......... 68 TTTGGGGAGG GGGCTGTTTA ATATGATTCT TTGGGTTATA TGTGTTATTG GTATTGTTGT 127990 .......... .......... .......... .......... .......... .......... 68 GGATAATTTG GATTGTTGTC GGATTGGGAC GAAGTAAGGA AAATAGGGGA GGTGCTGCCG 127930 .......... .......... .......... .......... .......... .......... 68 AATTTTCGTT AGATTATTAG CTAGCTTACA AGAAAGTAAA GCACGATGTT TATCTAATTG 127870 .......... .......... .......... .......... .......... .......... 68 CGGCACGATT GTTGCTTGTT ATAGATTAAT AGCTTGAGCA GTAAATATTG GACGTGCGGC 127810 |||||| |||||||||| |||||||||| |||||||||| .......... .......... ....ATTAAT AGCTTGAGCA GTAAATATTG GACGTGCGGC 104 TCGATTATAC GGTATGTAAC GCTGTCCCTT CTTTCTTTGC TTGGCATGAC TTTTAAAAAT 127750 |||| ||||| | TCGACTATAC G......... .......... .......... .......... .......... 115 AAGCGAATAA CGGACAGATT TGATACTTAC CTCTAAAGCG TCTAGGTGAT GTATATTCTT 127690 .......... .......... .......... .......... .......... .......... 115 GCTTCCACAA TTATTCCTCT ATATATCGGT TATGTCTAAG GCTATGATGA TCTCTAATAT 127630 .......... .......... .......... .......... .......... .......... 115 CTATGGTAAT GCTTCTTAGA GTCATTGAAA TTTTACGTTT TCATATCGTA TTAAAGGTTC 127570 .......... .......... .......... .......... .......... .......... 115 ATAATCTTGA TAAAACATTA ATCTTTGGTA ATACTCCTTG CTGGTTCACG TTGATTGTTC 127510 .......... .......... .......... .......... .......... .......... 115 TATTGAGTTA TAAGAAATGA TTTTAATTGC ATATGGTTGC TCACAATATT CTGCTCGTGC 127450 .......... .......... .......... .......... .......... .......... 115 ATAGAGTCAT TTATCATTTC ACCGAGTCCC GGGCCGGGTA ATGTTCGTGC GGAGTTTCTT 127390 .......... .......... .......... .......... .......... .......... 115 GCATATGTCA CCGAGTTCCT CACTAGAGGG CCGGGTATGT ATATTATATA TATGATTGGT 127330 .......... .......... .......... .......... .......... .......... 115 GATGAGGATG GTTATGATGA TGATGATGAC GGAGATGACG TGATGATTAT TTTGCCGAGC 127270 .......... .......... .......... .......... .......... .......... 115 CCCTTACTAG GGAAGCTGGG CACCTTAAAT GTTAAATATA TGCATGATTT TCACTTAAAA 127210 .......... .......... .......... .......... .......... .......... 115 AGTATATGTG TAGCGATATT TGTTTCGAGT TGCCACATTG GTATCCTGTC ATCTTTACCT 127150 .......... .......... .......... .......... .......... .......... 115 TATGCTTTAC ATACTCAGTA CATTGGTCCG TACTGGACCC CCCCTTTCCT CGGGGGGGCT 127090 .......... .......... .......... .......... .......... .......... 115 GCGTTTCATG CCCGCAGGGT GTAGACGCGC AGTTCGGTGA TCCTCCCGCC TAGGATATCT 127030 || |||||||| | |||||||||| |||||||||| |||||||||| .......... ........GT GTAGACGCTC AGTTCGGTGA TCCTCCCGCC TAGGATATCT 157 ACTCTGCTGA TTGGGAGAGC TCCACTGTTC CGGAGCCCAT TCGTTTTGGT ACATAAC-TT 126971 ||| |||||| ||||||||| ||||||||| || |||||| || ||||||| ||||||| || ACTTTGCTGA GTGGGAGAGC TCCACTGTTT CGTAGCCCAG TCATTTTGGT ACATAACTTT 217 TTGTGTAGTC TTTTGCTCGT CTATGGGTAT GGCGGGGCCC TGTCCCGTCG AGTTTCACTA 126911 |||||||||| ||||||| || |||||||||| || ||||||| |||||||||| |||||||||| TTGTGTAGTC TTTTGCTTGT CTATGGGTAT GGTGGGGCCC TGTCCCGTCG AGTTTCACTA 277 ATGTACCCTT AGAGGTCTGT GGACATTATG TGGGTTGTAT ATATATGTTT TGGATAATGG 126851 | ||| ||| ||||||| | ||||| | |||||||||| |||||||||| |||||||||| CTATACTCTT AGAGGTCCAT AGACATCGCG TGGGTTGTAT ATATATGTTT TGGATAATGG 337 TCTGGACATG GTTTGTTTGG GATGTCCGCT TGTACAGGGG CAGCCTTGTC GGCTGTGTAC 126791 |||||||||| |||||||||| ||||||| || |||||| ||| |||||||||| |||| |||| TCTGGACATG GTTTGTTTGG GATGTCCACT TGTACAAGGG CAGCCTTGTC AGCTGCGTAC 397 ATCATTATGC TTTGAATAGT GGCGGCCTTG TCGGCTCGCG TATGCTGTTA TGGTTAAATG 126731 ||| || || ||| |||| ||| |||||| |||||| ||| |||||| ||| || ATCTTTGTGT ATTGTGTAGT GGCAGCCTTG TCGGCT-GCG TATGCTATTA TG........ 448 GTTATGACTC CTTATGAGAC AGGTCCTCTT ATATATATAT ATGACGTTGG GGTTGGCTTG 126671 .......... .......... .......... .......... .......... .......... 448 ATTTGATTAA ATTCCATATT GTCTTAGTTT CAGTTGGTCA TACTTAGCAG GTTTGTATGT 126611 |||| || .......... .......... .......... .......... .......... CTTTGGATAG 458 CGGTGTCCAA AACGG 126596 || | || ||| TGGCGGCCTT GTCGG 473 hqPGS_C10HBa0115K16.1-_SGN-E543104+ (128468 128400,127845 127799,127071 126739,126620 126596) ******************************************************************************** EST sequence 35 -strand 542 n (File: SGN-E374134-) 1 CAGCCATGGA AATGGAGAAA ACCAGCCATT AAACTCTTGG ACAGCAGCTG CAAAGAAATT 61 GATTTATACC TTGAGCAGTA AATATTGGAC GTACGGCTCG ACTATTCGGT GTAGACGCTC 121 AGTTCGGTGA TCCTCCCGCC TAGGATATCT ACTCTGCTTT TTGGGAGAGC TCCACTGTTC 181 CGGAGCCCAG TCGTTTTGGT ACATAACTTC TTATGTAGTC TTTTGCTTGT CTATGGGTAT 241 GGCGGGGCCC TGTCCCGTCA AGTTTCACTA CTATACTCTT AGAGGTCTGT AGACATCGTG 301 TGGGTTGTAT AATTATGTTT TGGATAATGG TCTGGACATG GTTTGTTTGG GATGTCCATT 361 TGTACAAGTG CAGCCTTGTC GGTTGTGAAC ATCATTGTGT ATTGTGTAGT GGCAGCCTCG 421 TCGGCTGCGT ATGCTATTAT GTTTTGGATA GTGGCGGCCT TGTCGGCTCG CATATGTTGT 481 TACGATTTAA TGGTTATGAC TCTTTATGAG ATAGATCCAC TTTATATATA AAAAAAAAAA 541 AA Predicted gene structure (within gDNA segment 128860 to 124374): Exon 1 128466 128407 ( 60 n); cDNA 1 61 ( 61 n); score: 0.842 Intron 1 128406 127846 ( 561 n); Pd: 0.997 (s: 0.81), Pa: 0.868 (s: 0.89) Exon 2 127845 127799 ( 47 n); cDNA 62 108 ( 47 n); score: 0.894 Intron 2 127798 127072 ( 727 n); Pd: 0.991 (s: 0.89), Pa: 0.000 (s: 0.98) Exon 3 127071 126739 ( 333 n); cDNA 109 441 ( 333 n); score: 0.902 Intron 3 126738 126621 ( 118 n); Pd: 0.404 (s: 0.82), Pa: 0.922 (s: 0) Exon 4 126620 126596 ( 25 n); cDNA 442 466 ( 25 n); score: 0.560 PPA cDNA 528 542 MATCH C10HBa0115K16.1- SGN-E374134- 0.893 465 0.858 C PGS_C10HBa0115K16.1-_SGN-E374134- (128466 128407,127845 127799,127071 126739,126620 126596) Alignment (genomic DNA sequence = upper lines): CAGCCATGGA AATGGAG-AA ACCAACCCTG CAACTCTTGG CCAGCAGCTG CAAATAATTT 128408 |||||||||| ||||||| || |||| || | ||||||||| ||||||||| |||| || || CAGCCATGGA AATGGAGAAA ACCAGCCATT AAACTCTTGG ACAGCAGCTG CAAAGAAATT 60 GGTTAGTAAT CTCCTTGTTT GGTGTGTTAA TTCTTTAGAA TACCCTTGTT AATTATCCAT 128348 | G......... .......... .......... .......... .......... .......... 61 TAATTTTAAG AAGGGGGCGT GACCAGTAGC TTAGGAAGTT TGTTTTAGTT ATTGAATGTA 128288 .......... .......... .......... .......... .......... .......... 61 CTAAGTATGA ATGGAAACCA TAATCGGATT ATTAGTGGTG TCGTGTTGGT GCTTGGGCTG 128228 .......... .......... .......... .......... .......... .......... 61 TTTTGATTAA AGCAAACTGC AGGAAAATTC TGTTTTGGCA TTATGTATAT GTTGAATGTG 128168 .......... .......... .......... .......... .......... .......... 61 ATTATGAGTA TATACTCCAA AGGATGAATA CGATAAGGTA GATGTGTTAC GAATTATAAA 128108 .......... .......... .......... .......... .......... .......... 61 ACGAGTTATC ACTCGGTGTG TCATTGCTTC GCTGATATAG TTGCCGAGAT GGAACTGTTT 128048 .......... .......... .......... .......... .......... .......... 61 TGGGGAGGGG GCTGTTTAAT ATGATTCTTT GGGTTATATG TGTTATTGGT ATTGTTGTGG 127988 .......... .......... .......... .......... .......... .......... 61 ATAATTTGGA TTGTTGTCGG ATTGGGACGA AGTAAGGAAA ATAGGGGAGG TGCTGCCGAA 127928 .......... .......... .......... .......... .......... .......... 61 TTTTCGTTAG ATTATTAGCT AGCTTACAAG AAAGTAAAGC ACGATGTTTA TCTAATTGCG 127868 .......... .......... .......... .......... .......... .......... 61 GCACGATTGT TGCTTGTTAT AGATTAATAG CTTGAGCAGT AAATATTGGA CGTGCGGCTC 127808 ||| ||| |||||||||| |||||||||| ||| |||||| .......... .......... ..ATTTATAC CTTGAGCAGT AAATATTGGA CGTACGGCTC 99 GATTATACGG TATGTAACGC TGTCCCTTCT TTCTTTGCTT GGCATGACTT TTAAAAATAA 127748 || ||| || GACTATTCG. .......... .......... .......... .......... .......... 108 GCGAATAACG GACAGATTTG ATACTTACCT CTAAAGCGTC TAGGTGATGT ATATTCTTGC 127688 .......... .......... .......... .......... .......... .......... 108 TTCCACAATT ATTCCTCTAT ATATCGGTTA TGTCTAAGGC TATGATGATC TCTAATATCT 127628 .......... .......... .......... .......... .......... .......... 108 ATGGTAATGC TTCTTAGAGT CATTGAAATT TTACGTTTTC ATATCGTATT AAAGGTTCAT 127568 .......... .......... .......... .......... .......... .......... 108 AATCTTGATA AAACATTAAT CTTTGGTAAT ACTCCTTGCT GGTTCACGTT GATTGTTCTA 127508 .......... .......... .......... .......... .......... .......... 108 TTGAGTTATA AGAAATGATT TTAATTGCAT ATGGTTGCTC ACAATATTCT GCTCGTGCAT 127448 .......... .......... .......... .......... .......... .......... 108 AGAGTCATTT ATCATTTCAC CGAGTCCCGG GCCGGGTAAT GTTCGTGCGG AGTTTCTTGC 127388 .......... .......... .......... .......... .......... .......... 108 ATATGTCACC GAGTTCCTCA CTAGAGGGCC GGGTATGTAT ATTATATATA TGATTGGTGA 127328 .......... .......... .......... .......... .......... .......... 108 TGAGGATGGT TATGATGATG ATGATGACGG AGATGACGTG ATGATTATTT TGCCGAGCCC 127268 .......... .......... .......... .......... .......... .......... 108 CTTACTAGGG AAGCTGGGCA CCTTAAATGT TAAATATATG CATGATTTTC ACTTAAAAAG 127208 .......... .......... .......... .......... .......... .......... 108 TATATGTGTA GCGATATTTG TTTCGAGTTG CCACATTGGT ATCCTGTCAT CTTTACCTTA 127148 .......... .......... .......... .......... .......... .......... 108 TGCTTTACAT ACTCAGTACA TTGGTCCGTA CTGGACCCCC CCTTTCCTCG GGGGGGCTGC 127088 .......... .......... .......... .......... .......... .......... 108 GTTTCATGCC CGCAGGGTGT AGACGCGCAG TTCGGTGATC CTCCCGCCTA GGATATCTAC 127028 |||| |||||| ||| |||||||||| |||||||||| |||||||||| .......... ......GTGT AGACGCTCAG TTCGGTGATC CTCCCGCCTA GGATATCTAC 152 TCTGCTGATT GGGAGAGCTC CACTGTTCCG GAGCCCATTC GTTTTGGTAC ATAACTT-TT 126969 |||||| || |||||||||| |||||||||| ||||||| || |||||||||| ||||||| || TCTGCTTTTT GGGAGAGCTC CACTGTTCCG GAGCCCAGTC GTTTTGGTAC ATAACTTCTT 212 GTGTAGTCTT TTGCTCGTCT ATGGGTATGG CGGGGCCCTG TCCCGTCGAG TTTCACTAAT 126909 ||||||||| ||||| |||| |||||||||| |||||||||| ||||||| || |||||||| | ATGTAGTCTT TTGCTTGTCT ATGGGTATGG CGGGGCCCTG TCCCGTCAAG TTTCACTACT 272 GTACCCTTAG AGGTCTGTGG ACATTATGTG GGTTGTATAT ATATGTTTTG GATAATGGTC 126849 ||| ||||| |||||||| | |||| |||| ||||||||| ||||||||| |||||||||| ATACTCTTAG AGGTCTGTAG ACATCGTGTG GGTTGTATAA TTATGTTTTG GATAATGGTC 332 TGGACATGGT TTGTTTGGGA TGTCCGCTTG TACAGGGGCA GCCTTGTCGG CTGTGTACAT 126789 |||||||||| |||||||||| ||||| ||| |||| | ||| |||||||||| |||| |||| TGGACATGGT TTGTTTGGGA TGTCCATTTG TACAAGTGCA GCCTTGTCGG TTGTGAACAT 392 CATTATGCTT TGAATAGTGG CGGCCTTGTC GGCTCGCGTA TGCTGTTATG GTTAAATGGT 126729 |||| || | || |||||| | |||| ||| |||| ||||| |||| ||||| CATTGTGTAT TGTGTAGTGG CAGCCTCGTC GGCT-GCGTA TGCTATTATG .......... 441 TATGACTCCT TATGAGACAG GTCCTCTTAT ATATATATAT GACGTTGGGG TTGGCTTGAT 126669 .......... .......... .......... .......... .......... .......... 441 TTGATTAAAT TCCATATTGT CTTAGTTTCA GTTGGTCATA CTTAGCAGGT TTGTATGTCG 126609 | ||| || | .......... .......... .......... .......... ........TT TTGGATAGTG 453 GTGTCCAAAA CGG 126596 | | || ||| GCGGCCTTGT CGG 466 hqPGS_C10HBa0115K16.1-_SGN-E374134- (128466 128407,127845 127799,127071 126739,126620 126596) ******************************************************************************** EST sequence 148 +strand 547 n (File: SGN-E305738+) 1 AGCCATGGAA ATGGAGAAAA CCAGCCATTA AACTCTTGGA CAGCAGCTGC AAAGAAATTG 61 ATTTATACCT TGAGCAGTAA ATATTGGACG TACGGCTCGA CTATTCGGTG TAGACGCTCA 121 GTTCGGTGAT CCTCCCGCCT AGGATATCTA CTCTGCTTTT TGGGAGAGCT CCACTGTTCC 181 GGAGCCCAGT CGTTTTGGTA CATAACTTCT TATGTAGTCT TTTGCTTGTC TATGGGTATG 241 GCGGGGCCCT GTCCCGTCAA GTTTCACTAC TATACTCTTA GAGGTCTGTA GACATCGTGT 301 GGGTTGTATA ATTATGTTTT GGATAATGGT CTGGACATGG TTTGTTTGGG ATGTCCATTT 361 GTACAAGTGC AGCCTTGTCG GTTGTGAACA TCATTGTGTA TTGTGTAGTG GCAGCCTCGT 421 CGGCTGCGTA TGCTATTATG TTTTGGATAG TGGCGGCCTT GTCGGCTCGC ATATGTTGTT 481 ACGATTTAAT GGTTATGACT CTTTATGAGA TAGATCCACT TTATATATGA AATGAATGGA 541 CTAACTA Predicted gene structure (within gDNA segment 128840 to 124304): Exon 1 128465 128407 ( 59 n); cDNA 1 60 ( 60 n); score: 0.839 Intron 1 128406 127846 ( 561 n); Pd: 0.997 (s: 0.81), Pa: 0.868 (s: 0.89) Exon 2 127845 127799 ( 47 n); cDNA 61 107 ( 47 n); score: 0.894 Intron 2 127798 127072 ( 727 n); Pd: 0.991 (s: 0.89), Pa: 0.000 (s: 0.98) Exon 3 127071 126739 ( 333 n); cDNA 108 440 ( 333 n); score: 0.902 Intron 3 126738 126621 ( 118 n); Pd: 0.404 (s: 0.82), Pa: 0.922 (s: 0) Exon 4 126620 126596 ( 25 n); cDNA 441 465 ( 25 n); score: 0.560 MATCH C10HBa0115K16.1- SGN-E305738+ 0.893 464 0.848 C PGS_C10HBa0115K16.1-_SGN-E305738+ (128465 128407,127845 127799,127071 126739,126620 126596) Alignment (genomic DNA sequence = upper lines): AGCCATGGAA ATGGAGA-AA CCAACCCTGC AACTCTTGGC CAGCAGCTGC AAATAATTTG 128407 |||||||||| ||||||| || ||| || | ||||||||| |||||||||| ||| || ||| AGCCATGGAA ATGGAGAAAA CCAGCCATTA AACTCTTGGA CAGCAGCTGC AAAGAAATTG 60 GTTAGTAATC TCCTTGTTTG GTGTGTTAAT TCTTTAGAAT ACCCTTGTTA ATTATCCATT 128347 .......... .......... .......... .......... .......... .......... 60 AATTTTAAGA AGGGGGCGTG ACCAGTAGCT TAGGAAGTTT GTTTTAGTTA TTGAATGTAC 128287 .......... .......... .......... .......... .......... .......... 60 TAAGTATGAA TGGAAACCAT AATCGGATTA TTAGTGGTGT CGTGTTGGTG CTTGGGCTGT 128227 .......... .......... .......... .......... .......... .......... 60 TTTGATTAAA GCAAACTGCA GGAAAATTCT GTTTTGGCAT TATGTATATG TTGAATGTGA 128167 .......... .......... .......... .......... .......... .......... 60 TTATGAGTAT ATACTCCAAA GGATGAATAC GATAAGGTAG ATGTGTTACG AATTATAAAA 128107 .......... .......... .......... .......... .......... .......... 60 CGAGTTATCA CTCGGTGTGT CATTGCTTCG CTGATATAGT TGCCGAGATG GAACTGTTTT 128047 .......... .......... .......... .......... .......... .......... 60 GGGGAGGGGG CTGTTTAATA TGATTCTTTG GGTTATATGT GTTATTGGTA TTGTTGTGGA 127987 .......... .......... .......... .......... .......... .......... 60 TAATTTGGAT TGTTGTCGGA TTGGGACGAA GTAAGGAAAA TAGGGGAGGT GCTGCCGAAT 127927 .......... .......... .......... .......... .......... .......... 60 TTTCGTTAGA TTATTAGCTA GCTTACAAGA AAGTAAAGCA CGATGTTTAT CTAATTGCGG 127867 .......... .......... .......... .......... .......... .......... 60 CACGATTGTT GCTTGTTATA GATTAATAGC TTGAGCAGTA AATATTGGAC GTGCGGCTCG 127807 ||| ||| | |||||||||| |||||||||| || ||||||| .......... .......... .ATTTATACC TTGAGCAGTA AATATTGGAC GTACGGCTCG 99 ATTATACGGT ATGTAACGCT GTCCCTTCTT TCTTTGCTTG GCATGACTTT TAAAAATAAG 127747 | ||| || ACTATTCG.. .......... .......... .......... .......... .......... 107 CGAATAACGG ACAGATTTGA TACTTACCTC TAAAGCGTCT AGGTGATGTA TATTCTTGCT 127687 .......... .......... .......... .......... .......... .......... 107 TCCACAATTA TTCCTCTATA TATCGGTTAT GTCTAAGGCT ATGATGATCT CTAATATCTA 127627 .......... .......... .......... .......... .......... .......... 107 TGGTAATGCT TCTTAGAGTC ATTGAAATTT TACGTTTTCA TATCGTATTA AAGGTTCATA 127567 .......... .......... .......... .......... .......... .......... 107 ATCTTGATAA AACATTAATC TTTGGTAATA CTCCTTGCTG GTTCACGTTG ATTGTTCTAT 127507 .......... .......... .......... .......... .......... .......... 107 TGAGTTATAA GAAATGATTT TAATTGCATA TGGTTGCTCA CAATATTCTG CTCGTGCATA 127447 .......... .......... .......... .......... .......... .......... 107 GAGTCATTTA TCATTTCACC GAGTCCCGGG CCGGGTAATG TTCGTGCGGA GTTTCTTGCA 127387 .......... .......... .......... .......... .......... .......... 107 TATGTCACCG AGTTCCTCAC TAGAGGGCCG GGTATGTATA TTATATATAT GATTGGTGAT 127327 .......... .......... .......... .......... .......... .......... 107 GAGGATGGTT ATGATGATGA TGATGACGGA GATGACGTGA TGATTATTTT GCCGAGCCCC 127267 .......... .......... .......... .......... .......... .......... 107 TTACTAGGGA AGCTGGGCAC CTTAAATGTT AAATATATGC ATGATTTTCA CTTAAAAAGT 127207 .......... .......... .......... .......... .......... .......... 107 ATATGTGTAG CGATATTTGT TTCGAGTTGC CACATTGGTA TCCTGTCATC TTTACCTTAT 127147 .......... .......... .......... .......... .......... .......... 107 GCTTTACATA CTCAGTACAT TGGTCCGTAC TGGACCCCCC CTTTCCTCGG GGGGGCTGCG 127087 .......... .......... .......... .......... .......... .......... 107 TTTCATGCCC GCAGGGTGTA GACGCGCAGT TCGGTGATCC TCCCGCCTAG GATATCTACT 127027 ||||| ||||| |||| |||||||||| |||||||||| |||||||||| .......... .....GTGTA GACGCTCAGT TCGGTGATCC TCCCGCCTAG GATATCTACT 152 CTGCTGATTG GGAGAGCTCC ACTGTTCCGG AGCCCATTCG TTTTGGTACA TAACTT-TTG 126968 ||||| ||| |||||||||| |||||||||| |||||| ||| |||||||||| |||||| || CTGCTTTTTG GGAGAGCTCC ACTGTTCCGG AGCCCAGTCG TTTTGGTACA TAACTTCTTA 212 TGTAGTCTTT TGCTCGTCTA TGGGTATGGC GGGGCCCTGT CCCGTCGAGT TTCACTAATG 126908 |||||||||| |||| ||||| |||||||||| |||||||||| |||||| ||| ||||||| | TGTAGTCTTT TGCTTGTCTA TGGGTATGGC GGGGCCCTGT CCCGTCAAGT TTCACTACTA 272 TACCCTTAGA GGTCTGTGGA CATTATGTGG GTTGTATATA TATGTTTTGG ATAATGGTCT 126848 ||| |||||| ||||||| || ||| ||||| |||||||| |||||||||| |||||||||| TACTCTTAGA GGTCTGTAGA CATCGTGTGG GTTGTATAAT TATGTTTTGG ATAATGGTCT 332 GGACATGGTT TGTTTGGGAT GTCCGCTTGT ACAGGGGCAG CCTTGTCGGC TGTGTACATC 126788 |||||||||| |||||||||| |||| |||| ||| | |||| ||||||||| |||| ||||| GGACATGGTT TGTTTGGGAT GTCCATTTGT ACAAGTGCAG CCTTGTCGGT TGTGAACATC 392 ATTATGCTTT GAATAGTGGC GGCCTTGTCG GCTCGCGTAT GCTGTTATGG TTAAATGGTT 126728 ||| || || | ||||||| |||| |||| ||| |||||| ||| ||||| ATTGTGTATT GTGTAGTGGC AGCCTCGTCG GCT-GCGTAT GCTATTATG. .......... 440 ATGACTCCTT ATGAGACAGG TCCTCTTATA TATATATATG ACGTTGGGGT TGGCTTGATT 126668 .......... .......... .......... .......... .......... .......... 440 TGATTAAATT CCATATTGTC TTAGTTTCAG TTGGTCATAC TTAGCAGGTT TGTATGTCGG 126608 || || || || .......... .......... .......... .......... .......TTT TGGATAGTGG 453 TGTCCAAAAC GG 126596 | || | || CGGCCTTGTC GG 465 hqPGS_C10HBa0115K16.1-_SGN-E305738+ (128465 128407,127845 127799,127071 126739,126620 126596) ******************************************************************************** EST sequence 185 +strand 542 n (File: SGN-E374135+) 1 AGCCATGGAA ATGGAGAAAA CCAGCCATTA AACTCTTGGA CAGCAGCTGC AAAGAAATTG 61 ATTTATACCT TGAGCAGTAA ATATTGGACG TACGGCTCGA CTATTCGGTG TAGACGCTCA 121 GTTCGGTGAT CCTCCCGCCT AGGATATCTA CTCTGCTTTT TGGGAGAGCT CCACTGTTCC 181 GGAGCCCAGT CGTTTTGGTA CATAACTTCT TATGTAGTCT TTTGCTTGTC TATGGGTATG 241 GCGGGGCCCT GTCCCGTCAA GTTTCACTAC TATACTCTTA GAGGTCTGTA GACATCGTGT 301 GGGTTGTATA ATTATGTTTT GGATAATGGT CTGGACATGG TTTGTTTGGG ATGTCCATTT 361 GTACAAGTGC AGCCTTGTCG GTTGTGAACA TCATTGTGTA TTGTGTAGTG GCAGCCTCGT 421 CGGCTGCGTA TGCTATTATG TTTTGGATAG TGGCGGCCTT GTCGGCTCGC ATATGTTGTT 481 ACGATTTAAT GGTTATGACT CTTTATGAGA TAGATCCACT TTATATATAA AAAAAAAAAA 541 AA Predicted gene structure (within gDNA segment 128840 to 124354): Exon 1 128465 128407 ( 59 n); cDNA 1 60 ( 60 n); score: 0.839 Intron 1 128406 127846 ( 561 n); Pd: 0.997 (s: 0.81), Pa: 0.868 (s: 0.89) Exon 2 127845 127799 ( 47 n); cDNA 61 107 ( 47 n); score: 0.894 Intron 2 127798 127072 ( 727 n); Pd: 0.991 (s: 0.89), Pa: 0.000 (s: 0.98) Exon 3 127071 126739 ( 333 n); cDNA 108 440 ( 333 n); score: 0.902 Intron 3 126738 126621 ( 118 n); Pd: 0.404 (s: 0.82), Pa: 0.922 (s: 0) Exon 4 126620 126596 ( 25 n); cDNA 441 465 ( 25 n); score: 0.560 PPA cDNA 527 542 MATCH C10HBa0115K16.1- SGN-E374135+ 0.893 464 0.856 C PGS_C10HBa0115K16.1-_SGN-E374135+ (128465 128407,127845 127799,127071 126739,126620 126596) Alignment (genomic DNA sequence = upper lines): AGCCATGGAA ATGGAGA-AA CCAACCCTGC AACTCTTGGC CAGCAGCTGC AAATAATTTG 128407 |||||||||| ||||||| || ||| || | ||||||||| |||||||||| ||| || ||| AGCCATGGAA ATGGAGAAAA CCAGCCATTA AACTCTTGGA CAGCAGCTGC AAAGAAATTG 60 GTTAGTAATC TCCTTGTTTG GTGTGTTAAT TCTTTAGAAT ACCCTTGTTA ATTATCCATT 128347 .......... .......... .......... .......... .......... .......... 60 AATTTTAAGA AGGGGGCGTG ACCAGTAGCT TAGGAAGTTT GTTTTAGTTA TTGAATGTAC 128287 .......... .......... .......... .......... .......... .......... 60 TAAGTATGAA TGGAAACCAT AATCGGATTA TTAGTGGTGT CGTGTTGGTG CTTGGGCTGT 128227 .......... .......... .......... .......... .......... .......... 60 TTTGATTAAA GCAAACTGCA GGAAAATTCT GTTTTGGCAT TATGTATATG TTGAATGTGA 128167 .......... .......... .......... .......... .......... .......... 60 TTATGAGTAT ATACTCCAAA GGATGAATAC GATAAGGTAG ATGTGTTACG AATTATAAAA 128107 .......... .......... .......... .......... .......... .......... 60 CGAGTTATCA CTCGGTGTGT CATTGCTTCG CTGATATAGT TGCCGAGATG GAACTGTTTT 128047 .......... .......... .......... .......... .......... .......... 60 GGGGAGGGGG CTGTTTAATA TGATTCTTTG GGTTATATGT GTTATTGGTA TTGTTGTGGA 127987 .......... .......... .......... .......... .......... .......... 60 TAATTTGGAT TGTTGTCGGA TTGGGACGAA GTAAGGAAAA TAGGGGAGGT GCTGCCGAAT 127927 .......... .......... .......... .......... .......... .......... 60 TTTCGTTAGA TTATTAGCTA GCTTACAAGA AAGTAAAGCA CGATGTTTAT CTAATTGCGG 127867 .......... .......... .......... .......... .......... .......... 60 CACGATTGTT GCTTGTTATA GATTAATAGC TTGAGCAGTA AATATTGGAC GTGCGGCTCG 127807 ||| ||| | |||||||||| |||||||||| || ||||||| .......... .......... .ATTTATACC TTGAGCAGTA AATATTGGAC GTACGGCTCG 99 ATTATACGGT ATGTAACGCT GTCCCTTCTT TCTTTGCTTG GCATGACTTT TAAAAATAAG 127747 | ||| || ACTATTCG.. .......... .......... .......... .......... .......... 107 CGAATAACGG ACAGATTTGA TACTTACCTC TAAAGCGTCT AGGTGATGTA TATTCTTGCT 127687 .......... .......... .......... .......... .......... .......... 107 TCCACAATTA TTCCTCTATA TATCGGTTAT GTCTAAGGCT ATGATGATCT CTAATATCTA 127627 .......... .......... .......... .......... .......... .......... 107 TGGTAATGCT TCTTAGAGTC ATTGAAATTT TACGTTTTCA TATCGTATTA AAGGTTCATA 127567 .......... .......... .......... .......... .......... .......... 107 ATCTTGATAA AACATTAATC TTTGGTAATA CTCCTTGCTG GTTCACGTTG ATTGTTCTAT 127507 .......... .......... .......... .......... .......... .......... 107 TGAGTTATAA GAAATGATTT TAATTGCATA TGGTTGCTCA CAATATTCTG CTCGTGCATA 127447 .......... .......... .......... .......... .......... .......... 107 GAGTCATTTA TCATTTCACC GAGTCCCGGG CCGGGTAATG TTCGTGCGGA GTTTCTTGCA 127387 .......... .......... .......... .......... .......... .......... 107 TATGTCACCG AGTTCCTCAC TAGAGGGCCG GGTATGTATA TTATATATAT GATTGGTGAT 127327 .......... .......... .......... .......... .......... .......... 107 GAGGATGGTT ATGATGATGA TGATGACGGA GATGACGTGA TGATTATTTT GCCGAGCCCC 127267 .......... .......... .......... .......... .......... .......... 107 TTACTAGGGA AGCTGGGCAC CTTAAATGTT AAATATATGC ATGATTTTCA CTTAAAAAGT 127207 .......... .......... .......... .......... .......... .......... 107 ATATGTGTAG CGATATTTGT TTCGAGTTGC CACATTGGTA TCCTGTCATC TTTACCTTAT 127147 .......... .......... .......... .......... .......... .......... 107 GCTTTACATA CTCAGTACAT TGGTCCGTAC TGGACCCCCC CTTTCCTCGG GGGGGCTGCG 127087 .......... .......... .......... .......... .......... .......... 107 TTTCATGCCC GCAGGGTGTA GACGCGCAGT TCGGTGATCC TCCCGCCTAG GATATCTACT 127027 ||||| ||||| |||| |||||||||| |||||||||| |||||||||| .......... .....GTGTA GACGCTCAGT TCGGTGATCC TCCCGCCTAG GATATCTACT 152 CTGCTGATTG GGAGAGCTCC ACTGTTCCGG AGCCCATTCG TTTTGGTACA TAACTT-TTG 126968 ||||| ||| |||||||||| |||||||||| |||||| ||| |||||||||| |||||| || CTGCTTTTTG GGAGAGCTCC ACTGTTCCGG AGCCCAGTCG TTTTGGTACA TAACTTCTTA 212 TGTAGTCTTT TGCTCGTCTA TGGGTATGGC GGGGCCCTGT CCCGTCGAGT TTCACTAATG 126908 |||||||||| |||| ||||| |||||||||| |||||||||| |||||| ||| ||||||| | TGTAGTCTTT TGCTTGTCTA TGGGTATGGC GGGGCCCTGT CCCGTCAAGT TTCACTACTA 272 TACCCTTAGA GGTCTGTGGA CATTATGTGG GTTGTATATA TATGTTTTGG ATAATGGTCT 126848 ||| |||||| ||||||| || ||| ||||| |||||||| |||||||||| |||||||||| TACTCTTAGA GGTCTGTAGA CATCGTGTGG GTTGTATAAT TATGTTTTGG ATAATGGTCT 332 GGACATGGTT TGTTTGGGAT GTCCGCTTGT ACAGGGGCAG CCTTGTCGGC TGTGTACATC 126788 |||||||||| |||||||||| |||| |||| ||| | |||| ||||||||| |||| ||||| GGACATGGTT TGTTTGGGAT GTCCATTTGT ACAAGTGCAG CCTTGTCGGT TGTGAACATC 392 ATTATGCTTT GAATAGTGGC GGCCTTGTCG GCTCGCGTAT GCTGTTATGG TTAAATGGTT 126728 ||| || || | ||||||| |||| |||| ||| |||||| ||| ||||| ATTGTGTATT GTGTAGTGGC AGCCTCGTCG GCT-GCGTAT GCTATTATG. .......... 440 ATGACTCCTT ATGAGACAGG TCCTCTTATA TATATATATG ACGTTGGGGT TGGCTTGATT 126668 .......... .......... .......... .......... .......... .......... 440 TGATTAAATT CCATATTGTC TTAGTTTCAG TTGGTCATAC TTAGCAGGTT TGTATGTCGG 126608 || || || || .......... .......... .......... .......... .......TTT TGGATAGTGG 453 TGTCCAAAAC GG 126596 | || | || CGGCCTTGTC GG 465 hqPGS_C10HBa0115K16.1-_SGN-E374135+ (128465 128407,127845 127799,127071 126739,126620 126596) ******************************************************************************** EST sequence 17 -strand 432 n (File: SGN-E225616-) 1 TATTCGGTGT AGACGCTCAG TTCGGTGATC CTCCCGCCTA GGATATCTAC TCTGCTTTTT 61 GGGAGAGCTC CACTGTTCCG GAGCCCAGTC GTTTTGGTAC ATAACTTCTT ATGTAGTCTT 121 TTGCTTGTCT ATGGGTATGG CGGGGCCCTG TCCCGTCAAG TTTCACTACT ATACTCTTAG 181 AGGTCTGTAG ACATCGTGTG GGTTGTATAA TTATGTTTTG GATAATGGTC TGGACATGGT 241 TTGTTTGGGA TGTCCATTTG TACAAGTGCA GCCTTGTCGG TTGTGAACAT CATTGTGTAT 301 TGTGTAGTGG CAGCCTCGTC GGCTGCGTAT GCTATTATGT TTTGGATAGT GGCGGCCTTG 361 TCGGCTCGCA TATGTTGTTA CGATTTAATG GTTATGACTC TTTATGAAAA AACCAAAAAA 421 AAAAAAAAAA AA Predicted gene structure (within gDNA segment 127840 to 124454): Exon 1 127072 126739 ( 334 n); cDNA 6 339 ( 334 n); score: 0.903 Intron 1 126738 126621 ( 118 n); Pd: 0.404 (s: 0.82), Pa: 0.922 (s: 0) Exon 2 126620 126596 ( 25 n); cDNA 340 364 ( 25 n); score: 0.560 PPA cDNA 415 432 MATCH C10HBa0115K16.1- SGN-E225616- 0.903 359 0.831 C PGS_C10HBa0115K16.1-_SGN-E225616- (127072 126739,126620 126596) Alignment (genomic DNA sequence = upper lines): GGTGTAGACG CGCAGTTCGG TGATCCTCCC GCCTAGGATA TCTACTCTGC TGATTGGGAG 127013 |||||||||| | |||||||| |||||||||| |||||||||| |||||||||| | ||||||| GGTGTAGACG CTCAGTTCGG TGATCCTCCC GCCTAGGATA TCTACTCTGC TTTTTGGGAG 65 AGCTCCACTG TTCCGGAGCC CATTCGTTTT GGTACATAAC TT-TTGTGTA GTCTTTTGCT 126954 |||||||||| |||||||||| || ||||||| |||||||||| || || |||| |||||||||| AGCTCCACTG TTCCGGAGCC CAGTCGTTTT GGTACATAAC TTCTTATGTA GTCTTTTGCT 125 CGTCTATGGG TATGGCGGGG CCCTGTCCCG TCGAGTTTCA CTAATGTACC CTTAGAGGTC 126894 ||||||||| |||||||||| |||||||||| || ||||||| ||| | ||| |||||||||| TGTCTATGGG TATGGCGGGG CCCTGTCCCG TCAAGTTTCA CTACTATACT CTTAGAGGTC 185 TGTGGACATT ATGTGGGTTG TATATATATG TTTTGGATAA TGGTCTGGAC ATGGTTTGTT 126834 ||| ||||| ||||||||| |||| |||| |||||||||| |||||||||| |||||||||| TGTAGACATC GTGTGGGTTG TATAATTATG TTTTGGATAA TGGTCTGGAC ATGGTTTGTT 245 TGGGATGTCC GCTTGTACAG GGGCAGCCTT GTCGGCTGTG TACATCATTA TGCTTTGAAT 126774 |||||||||| ||||||| | |||||||| ||||| |||| |||||||| || ||| | TGGGATGTCC ATTTGTACAA GTGCAGCCTT GTCGGTTGTG AACATCATTG TGTATTGTGT 305 AGTGGCGGCC TTGTCGGCTC GCGTATGCTG TTATGGTTAA ATGGTTATGA CTCCTTATGA 126714 |||||| ||| | ||||||| ||||||||| ||||| AGTGGCAGCC TCGTCGGCT- GCGTATGCTA TTATG..... .......... .......... 339 GACAGGTCCT CTTATATATA TATATGACGT TGGGGTTGGC TTGATTTGAT TAAATTCCAT 126654 .......... .......... .......... .......... .......... .......... 339 ATTGTCTTAG TTTCAGTTGG TCATACTTAG CAGGTTTGTA TGTCGGTGTC CAAAACGG 126596 |||| | | || | | | ||| .......... .......... .......... ...TTTTGGA TAGTGGCGGC CTTGTCGG 364 hqPGS_C10HBa0115K16.1-_SGN-E225616- (127072 126739,126620 126596) ******************************************************************************** EST sequence 141 +strand 495 n (File: SGN-E306317+) 1 TAAACTCTTG GACAGCAGCT GCAAAGAAAT TGGTGTAGAC GCTCAGTTCG GTGATCCTCC 61 CGCCTAGGAT ATCTACTCTG CTGTTTGGGA GAGCTCCACT GTTCCGGAGC CCAGTCGTTT 121 TGGTACATAA CTTCTTATGT AGTCTTTTGC TTGTCTATGG GTATGGCGGG GCCCTGTCCC 181 GTCAAGTTTC ACTACTATAC TCTTAGAGGT CTGTAGACAT CGTGTGGGTT GTATAATTAT 241 GTTTTGGATA ATGGTCTGGA CATGGTTTGT TTGGGATGTC CATTTGTACA AGTGCAGCCT 301 TGTCGGTTGT GAACATCATT GTGTATTGTG TAGTGGCAGC CTCGTCGGCT GCGTATGCTA 361 TTATGTTTTG GATAGTGGCG GCCTTGTCGG CTCGCATATG TTGTTACGAT TTAATGGTTA 421 TGACTCTTTA TGAGATAGAT CCACTTTATA TATATATATA TATATATGGC GTTGGGTTTN 481 AAAAAAAAAA AAAAA Predicted gene structure (within gDNA segment 128090 to 124074): Exon 1 127072 126739 ( 334 n); cDNA 32 365 ( 334 n); score: 0.906 Intron 1 126738 126621 ( 118 n); Pd: 0.404 (s: 0.82), Pa: 0.922 (s: 0) Exon 2 126620 126596 ( 25 n); cDNA 366 390 ( 25 n); score: 0.560 PPA cDNA 481 495 MATCH C10HBa0115K16.1- SGN-E306317+ 0.906 359 0.725 C PGS_C10HBa0115K16.1-_SGN-E306317+ (127072 126739,126620 126596) Alignment (genomic DNA sequence = upper lines): GGTGTAGACG CGCAGTTCGG TGATCCTCCC GCCTAGGATA TCTACTCTGC TGATTGGGAG 127013 |||||||||| | |||||||| |||||||||| |||||||||| |||||||||| || ||||||| GGTGTAGACG CTCAGTTCGG TGATCCTCCC GCCTAGGATA TCTACTCTGC TGTTTGGGAG 91 AGCTCCACTG TTCCGGAGCC CATTCGTTTT GGTACATAAC TT-TTGTGTA GTCTTTTGCT 126954 |||||||||| |||||||||| || ||||||| |||||||||| || || |||| |||||||||| AGCTCCACTG TTCCGGAGCC CAGTCGTTTT GGTACATAAC TTCTTATGTA GTCTTTTGCT 151 CGTCTATGGG TATGGCGGGG CCCTGTCCCG TCGAGTTTCA CTAATGTACC CTTAGAGGTC 126894 ||||||||| |||||||||| |||||||||| || ||||||| ||| | ||| |||||||||| TGTCTATGGG TATGGCGGGG CCCTGTCCCG TCAAGTTTCA CTACTATACT CTTAGAGGTC 211 TGTGGACATT ATGTGGGTTG TATATATATG TTTTGGATAA TGGTCTGGAC ATGGTTTGTT 126834 ||| ||||| ||||||||| |||| |||| |||||||||| |||||||||| |||||||||| TGTAGACATC GTGTGGGTTG TATAATTATG TTTTGGATAA TGGTCTGGAC ATGGTTTGTT 271 TGGGATGTCC GCTTGTACAG GGGCAGCCTT GTCGGCTGTG TACATCATTA TGCTTTGAAT 126774 |||||||||| ||||||| | |||||||| ||||| |||| |||||||| || ||| | TGGGATGTCC ATTTGTACAA GTGCAGCCTT GTCGGTTGTG AACATCATTG TGTATTGTGT 331 AGTGGCGGCC TTGTCGGCTC GCGTATGCTG TTATGGTTAA ATGGTTATGA CTCCTTATGA 126714 |||||| ||| | ||||||| ||||||||| ||||| AGTGGCAGCC TCGTCGGCT- GCGTATGCTA TTATG..... .......... .......... 365 GACAGGTCCT CTTATATATA TATATGACGT TGGGGTTGGC TTGATTTGAT TAAATTCCAT 126654 .......... .......... .......... .......... .......... .......... 365 ATTGTCTTAG TTTCAGTTGG TCATACTTAG CAGGTTTGTA TGTCGGTGTC CAAAACGG 126596 |||| | | || | | | ||| .......... .......... .......... ...TTTTGGA TAGTGGCGGC CTTGTCGG 390 hqPGS_C10HBa0115K16.1-_SGN-E306317+ (127072 126739,126620 126596) ******************************************************************************** EST sequence 231 +strand 523 n (File: SGN-E303695+) 1 AAATGGAGAA AACCAGCCAT TAAACTCTTG GACAGCAGCT GCAAAGAAAT TGGTGTAGAC 61 GCTCAGTTCG GTGATCCTCC CGCCTAGGAT ATCTACTCTG CTTTTTGGGA GAGCTCCACT 121 GTTCCGGAGC CCAGTCGTTT TGGTACATAA CTTCTTATGT AGTCTTTTGC TTGTCTATGG 181 GTATGGCGGG GCCCTGTCCC GTCAAGTTTC ACTACTATAC TCTTAGAGGT CTGTAGACAT 241 CGTGTGGGTT GTATAATTAT GTTTTGGATA ATGGTCTGGA CATGGTTTGT TTGGGATGTC 301 CATTTGTACA AGTGCAGCCT TGTCGGTTGT GAACATCATT GTGTATTGTG TAGTGGCAGC 361 CTCGTCGGCT GCGTATGCTA TTATGTTTTG GATAGTGGCG GCCTTGTCGG CTCGCATATG 421 TTGTTACGAT TTAATGGTTA TGACTCTTTA TGAGATAGAT CCACTTTATA TATATATATA 481 TATATATGGC GTTGGGTTTA GCTTGATTTG ATTAAAAAAA AAA Predicted gene structure (within gDNA segment 128290 to 123994): Exon 1 127072 126739 ( 334 n); cDNA 52 385 ( 334 n); score: 0.903 Intron 1 126738 126621 ( 118 n); Pd: 0.404 (s: 0.82), Pa: 0.922 (s: 0) Exon 2 126620 126596 ( 25 n); cDNA 386 410 ( 25 n); score: 0.560 PPA cDNA 514 523 MATCH C10HBa0115K16.1- SGN-E303695+ 0.903 359 0.686 C PGS_C10HBa0115K16.1-_SGN-E303695+ (127072 126739,126620 126596) Alignment (genomic DNA sequence = upper lines): GGTGTAGACG CGCAGTTCGG TGATCCTCCC GCCTAGGATA TCTACTCTGC TGATTGGGAG 127013 |||||||||| | |||||||| |||||||||| |||||||||| |||||||||| | ||||||| GGTGTAGACG CTCAGTTCGG TGATCCTCCC GCCTAGGATA TCTACTCTGC TTTTTGGGAG 111 AGCTCCACTG TTCCGGAGCC CATTCGTTTT GGTACATAAC TT-TTGTGTA GTCTTTTGCT 126954 |||||||||| |||||||||| || ||||||| |||||||||| || || |||| |||||||||| AGCTCCACTG TTCCGGAGCC CAGTCGTTTT GGTACATAAC TTCTTATGTA GTCTTTTGCT 171 CGTCTATGGG TATGGCGGGG CCCTGTCCCG TCGAGTTTCA CTAATGTACC CTTAGAGGTC 126894 ||||||||| |||||||||| |||||||||| || ||||||| ||| | ||| |||||||||| TGTCTATGGG TATGGCGGGG CCCTGTCCCG TCAAGTTTCA CTACTATACT CTTAGAGGTC 231 TGTGGACATT ATGTGGGTTG TATATATATG TTTTGGATAA TGGTCTGGAC ATGGTTTGTT 126834 ||| ||||| ||||||||| |||| |||| |||||||||| |||||||||| |||||||||| TGTAGACATC GTGTGGGTTG TATAATTATG TTTTGGATAA TGGTCTGGAC ATGGTTTGTT 291 TGGGATGTCC GCTTGTACAG GGGCAGCCTT GTCGGCTGTG TACATCATTA TGCTTTGAAT 126774 |||||||||| ||||||| | |||||||| ||||| |||| |||||||| || ||| | TGGGATGTCC ATTTGTACAA GTGCAGCCTT GTCGGTTGTG AACATCATTG TGTATTGTGT 351 AGTGGCGGCC TTGTCGGCTC GCGTATGCTG TTATGGTTAA ATGGTTATGA CTCCTTATGA 126714 |||||| ||| | ||||||| ||||||||| ||||| AGTGGCAGCC TCGTCGGCT- GCGTATGCTA TTATG..... .......... .......... 385 GACAGGTCCT CTTATATATA TATATGACGT TGGGGTTGGC TTGATTTGAT TAAATTCCAT 126654 .......... .......... .......... .......... .......... .......... 385 ATTGTCTTAG TTTCAGTTGG TCATACTTAG CAGGTTTGTA TGTCGGTGTC CAAAACGG 126596 |||| | | || | | | ||| .......... .......... .......... ...TTTTGGA TAGTGGCGGC CTTGTCGG 410 hqPGS_C10HBa0115K16.1-_SGN-E303695+ (127072 126739,126620 126596) ******************************************************************************** EST sequence 243 +strand 519 n (File: SGN-E310669+) 1 AGCCATGGAA ATGGAGAAAA CCAGCCATTA AACTCTTGGA CAGCAGCTGC AAAGAAATTG 61 ATTTATACCT TGAGCAGTAA ATATTGGACG TACGGCTCGA CTATTCGGTG TAGACGCTCA 121 GTTCGGTGAT CCTCCCGCCT AGGATATCTA CTCTGCTGTT TGGGAGAGCT CCACTGTTCC 181 GGAGCCCAGT CGTTTTGGTA CATAACTTCT TATGTAGTCT TTTGCTTGTC TATGGGTATG 241 GCGGGGCCCT GTCCCGTCAA GTTTCACTAC TATACTCTTA GAGGTCTGTA GACATCGTGT 301 GGGTTGTATA ATTATGTTTT GGATAATGGT CTGGACATGG TTTGTTTGGG ATGTCCATTT 361 GTACAAGTGC AGCCTTGTCG GTTGTGAACA TCATTGTGTA TTGTGTAGTG GCAGCCTCGT 421 CGGCTGCGTA TGCTATTATG TTTTGGATAG TGGCGGCCTT GTCGGCTCGC ATATGTTGTT 481 ACGATTTAAT GGTTATGACT CTTTATGAAA AAAAAAAAA Predicted gene structure (within gDNA segment 128840 to 124584): Exon 1 128465 128407 ( 59 n); cDNA 1 60 ( 60 n); score: 0.839 Intron 1 128406 127846 ( 561 n); Pd: 0.997 (s: 0.81), Pa: 0.868 (s: 0.89) Exon 2 127845 127799 ( 47 n); cDNA 61 107 ( 47 n); score: 0.894 Intron 2 127798 127072 ( 727 n); Pd: 0.991 (s: 0.89), Pa: 0.000 (s: 0.98) Exon 3 127071 126739 ( 333 n); cDNA 108 440 ( 333 n); score: 0.905 PPA cDNA 508 519 MATCH C10HBa0115K16.1- SGN-E310669+ 0.895 439 0.846 C PGS_C10HBa0115K16.1-_SGN-E310669+ (128465 128407,127845 127799,127071 126739) Alignment (genomic DNA sequence = upper lines): AGCCATGGAA ATGGAGA-AA CCAACCCTGC AACTCTTGGC CAGCAGCTGC AAATAATTTG 128407 |||||||||| ||||||| || ||| || | ||||||||| |||||||||| ||| || ||| AGCCATGGAA ATGGAGAAAA CCAGCCATTA AACTCTTGGA CAGCAGCTGC AAAGAAATTG 60 GTTAGTAATC TCCTTGTTTG GTGTGTTAAT TCTTTAGAAT ACCCTTGTTA ATTATCCATT 128347 .......... .......... .......... .......... .......... .......... 60 AATTTTAAGA AGGGGGCGTG ACCAGTAGCT TAGGAAGTTT GTTTTAGTTA TTGAATGTAC 128287 .......... .......... .......... .......... .......... .......... 60 TAAGTATGAA TGGAAACCAT AATCGGATTA TTAGTGGTGT CGTGTTGGTG CTTGGGCTGT 128227 .......... .......... .......... .......... .......... .......... 60 TTTGATTAAA GCAAACTGCA GGAAAATTCT GTTTTGGCAT TATGTATATG TTGAATGTGA 128167 .......... .......... .......... .......... .......... .......... 60 TTATGAGTAT ATACTCCAAA GGATGAATAC GATAAGGTAG ATGTGTTACG AATTATAAAA 128107 .......... .......... .......... .......... .......... .......... 60 CGAGTTATCA CTCGGTGTGT CATTGCTTCG CTGATATAGT TGCCGAGATG GAACTGTTTT 128047 .......... .......... .......... .......... .......... .......... 60 GGGGAGGGGG CTGTTTAATA TGATTCTTTG GGTTATATGT GTTATTGGTA TTGTTGTGGA 127987 .......... .......... .......... .......... .......... .......... 60 TAATTTGGAT TGTTGTCGGA TTGGGACGAA GTAAGGAAAA TAGGGGAGGT GCTGCCGAAT 127927 .......... .......... .......... .......... .......... .......... 60 TTTCGTTAGA TTATTAGCTA GCTTACAAGA AAGTAAAGCA CGATGTTTAT CTAATTGCGG 127867 .......... .......... .......... .......... .......... .......... 60 CACGATTGTT GCTTGTTATA GATTAATAGC TTGAGCAGTA AATATTGGAC GTGCGGCTCG 127807 ||| ||| | |||||||||| |||||||||| || ||||||| .......... .......... .ATTTATACC TTGAGCAGTA AATATTGGAC GTACGGCTCG 99 ATTATACGGT ATGTAACGCT GTCCCTTCTT TCTTTGCTTG GCATGACTTT TAAAAATAAG 127747 | ||| || ACTATTCG.. .......... .......... .......... .......... .......... 107 CGAATAACGG ACAGATTTGA TACTTACCTC TAAAGCGTCT AGGTGATGTA TATTCTTGCT 127687 .......... .......... .......... .......... .......... .......... 107 TCCACAATTA TTCCTCTATA TATCGGTTAT GTCTAAGGCT ATGATGATCT CTAATATCTA 127627 .......... .......... .......... .......... .......... .......... 107 TGGTAATGCT TCTTAGAGTC ATTGAAATTT TACGTTTTCA TATCGTATTA AAGGTTCATA 127567 .......... .......... .......... .......... .......... .......... 107 ATCTTGATAA AACATTAATC TTTGGTAATA CTCCTTGCTG GTTCACGTTG ATTGTTCTAT 127507 .......... .......... .......... .......... .......... .......... 107 TGAGTTATAA GAAATGATTT TAATTGCATA TGGTTGCTCA CAATATTCTG CTCGTGCATA 127447 .......... .......... .......... .......... .......... .......... 107 GAGTCATTTA TCATTTCACC GAGTCCCGGG CCGGGTAATG TTCGTGCGGA GTTTCTTGCA 127387 .......... .......... .......... .......... .......... .......... 107 TATGTCACCG AGTTCCTCAC TAGAGGGCCG GGTATGTATA TTATATATAT GATTGGTGAT 127327 .......... .......... .......... .......... .......... .......... 107 GAGGATGGTT ATGATGATGA TGATGACGGA GATGACGTGA TGATTATTTT GCCGAGCCCC 127267 .......... .......... .......... .......... .......... .......... 107 TTACTAGGGA AGCTGGGCAC CTTAAATGTT AAATATATGC ATGATTTTCA CTTAAAAAGT 127207 .......... .......... .......... .......... .......... .......... 107 ATATGTGTAG CGATATTTGT TTCGAGTTGC CACATTGGTA TCCTGTCATC TTTACCTTAT 127147 .......... .......... .......... .......... .......... .......... 107 GCTTTACATA CTCAGTACAT TGGTCCGTAC TGGACCCCCC CTTTCCTCGG GGGGGCTGCG 127087 .......... .......... .......... .......... .......... .......... 107 TTTCATGCCC GCAGGGTGTA GACGCGCAGT TCGGTGATCC TCCCGCCTAG GATATCTACT 127027 ||||| ||||| |||| |||||||||| |||||||||| |||||||||| .......... .....GTGTA GACGCTCAGT TCGGTGATCC TCCCGCCTAG GATATCTACT 152 CTGCTGATTG GGAGAGCTCC ACTGTTCCGG AGCCCATTCG TTTTGGTACA TAACTT-TTG 126968 |||||| ||| |||||||||| |||||||||| |||||| ||| |||||||||| |||||| || CTGCTGTTTG GGAGAGCTCC ACTGTTCCGG AGCCCAGTCG TTTTGGTACA TAACTTCTTA 212 TGTAGTCTTT TGCTCGTCTA TGGGTATGGC GGGGCCCTGT CCCGTCGAGT TTCACTAATG 126908 |||||||||| |||| ||||| |||||||||| |||||||||| |||||| ||| ||||||| | TGTAGTCTTT TGCTTGTCTA TGGGTATGGC GGGGCCCTGT CCCGTCAAGT TTCACTACTA 272 TACCCTTAGA GGTCTGTGGA CATTATGTGG GTTGTATATA TATGTTTTGG ATAATGGTCT 126848 ||| |||||| ||||||| || ||| ||||| |||||||| |||||||||| |||||||||| TACTCTTAGA GGTCTGTAGA CATCGTGTGG GTTGTATAAT TATGTTTTGG ATAATGGTCT 332 GGACATGGTT TGTTTGGGAT GTCCGCTTGT ACAGGGGCAG CCTTGTCGGC TGTGTACATC 126788 |||||||||| |||||||||| |||| |||| ||| | |||| ||||||||| |||| ||||| GGACATGGTT TGTTTGGGAT GTCCATTTGT ACAAGTGCAG CCTTGTCGGT TGTGAACATC 392 ATTATGCTTT GAATAGTGGC GGCCTTGTCG GCTCGCGTAT GCTGTTATG 126739 ||| || || | ||||||| |||| |||| ||| |||||| ||| ||||| ATTGTGTATT GTGTAGTGGC AGCCTCGTCG GCT-GCGTAT GCTATTATG 440 hqPGS_C10HBa0115K16.1-_SGN-E310669+ (128465 128407,127845 127799,127071 126739) ******************************************************************************** EST sequence 143 +strand 606 n (File: SGN-E538151+) 1 GAGAAAACCA GCCATTAAAC TCTTGGACAG CAGCTGCAAA GAAATTGAGT CATTTATCAT 61 TTCACCGAGT CCCGGGCCGG GTAATGTTCG TGCGGAGTTT CTTGCATATG TCACCGAGTC 121 CCTCACTAGA GGGCCGGGAA TGTATATTAT ATATATGATT GGTGATGAGG ATGGTTATGA 181 TGATGATGAT GACGGAGATG ATGTGATGAC TATTTCACTG AGTCCCTCAC TAGAGGGCCG 241 GGTGTAGACG CTCAGTTTGG TGATCCTCCC GCCTAGGATA TCTACTCTGC TGTTTGGGAG 301 AGCTCCACTG TTCCGGAGCC CAGTCGTTTT GGTACATAAC TTCTTATGTA GTCTTTTGCT 361 TGTCTATGGG TATGCGGGGC CCTGTCCCGT CAAGTTTCAC TACTATACTC TTAGAGGTCT 421 GTAGACATCG TGTGGGTTGT ATAATTATGT TTTTGATAAT GGTCTGGACA TGGTTTGTTT 481 GGGATGTCCA CTTGTACAAG TGCAACCTTG TCGGTTGTGT ACATCTTTGT GTATTGTGTA 541 GTGGCAGCCT TGTCGGCTGC GTATGCTATT ATGCTTTGAA TAGTGGCAGC CTTGTCGGCT 601 CGCGTA Predicted gene structure (within gDNA segment 128506 to 126139): Exon 1 128449 128407 ( 43 n); cDNA 5 47 ( 43 n); score: 0.837 Intron 1 128406 127446 ( 961 n); Pd: 0.997 (s: 0.84), Pa: 0.963 (s: 1.00) Exon 2 127445 127257 ( 189 n); cDNA 48 236 ( 189 n); score: 0.942 Intron 2 127256 127077 ( 180 n); Pd: 0.000 (s: 0.82), Pa: 0.000 (s: 0.94) Exon 3 127076 126739 ( 338 n); cDNA 237 573 ( 337 n); score: 0.898 MATCH C10HBa0115K16.1- SGN-E538151+ 0.914 570 0.941 C PGS_C10HBa0115K16.1-_SGN-E538151+ (128449 128407,127445 127257,127076 126739) Alignment (genomic DNA sequence = upper lines): AAACCAACCC TGCAACTCTT GGCCAGCAGC TGCAAATAAT TTGGTTAGTA ATCTCCTTGT 128390 |||||| || | ||||||| || ||||||| |||||| || ||| AAACCAGCCA TTAAACTCTT GGACAGCAGC TGCAAAGAAA TTG....... .......... 47 TTGGTGTGTT AATTCTTTAG AATACCCTTG TTAATTATCC ATTAATTTTA AGAAGGGGGC 128330 .......... .......... .......... .......... .......... .......... 47 GTGACCAGTA GCTTAGGAAG TTTGTTTTAG TTATTGAATG TACTAAGTAT GAATGGAAAC 128270 .......... .......... .......... .......... .......... .......... 47 CATAATCGGA TTATTAGTGG TGTCGTGTTG GTGCTTGGGC TGTTTTGATT AAAGCAAACT 128210 .......... .......... .......... .......... .......... .......... 47 GCAGGAAAAT TCTGTTTTGG CATTATGTAT ATGTTGAATG TGATTATGAG TATATACTCC 128150 .......... .......... .......... .......... .......... .......... 47 AAAGGATGAA TACGATAAGG TAGATGTGTT ACGAATTATA AAACGAGTTA TCACTCGGTG 128090 .......... .......... .......... .......... .......... .......... 47 TGTCATTGCT TCGCTGATAT AGTTGCCGAG ATGGAACTGT TTTGGGGAGG GGGCTGTTTA 128030 .......... .......... .......... .......... .......... .......... 47 ATATGATTCT TTGGGTTATA TGTGTTATTG GTATTGTTGT GGATAATTTG GATTGTTGTC 127970 .......... .......... .......... .......... .......... .......... 47 GGATTGGGAC GAAGTAAGGA AAATAGGGGA GGTGCTGCCG AATTTTCGTT AGATTATTAG 127910 .......... .......... .......... .......... .......... .......... 47 CTAGCTTACA AGAAAGTAAA GCACGATGTT TATCTAATTG CGGCACGATT GTTGCTTGTT 127850 .......... .......... .......... .......... .......... .......... 47 ATAGATTAAT AGCTTGAGCA GTAAATATTG GACGTGCGGC TCGATTATAC GGTATGTAAC 127790 .......... .......... .......... .......... .......... .......... 47 GCTGTCCCTT CTTTCTTTGC TTGGCATGAC TTTTAAAAAT AAGCGAATAA CGGACAGATT 127730 .......... .......... .......... .......... .......... .......... 47 TGATACTTAC CTCTAAAGCG TCTAGGTGAT GTATATTCTT GCTTCCACAA TTATTCCTCT 127670 .......... .......... .......... .......... .......... .......... 47 ATATATCGGT TATGTCTAAG GCTATGATGA TCTCTAATAT CTATGGTAAT GCTTCTTAGA 127610 .......... .......... .......... .......... .......... .......... 47 GTCATTGAAA TTTTACGTTT TCATATCGTA TTAAAGGTTC ATAATCTTGA TAAAACATTA 127550 .......... .......... .......... .......... .......... .......... 47 ATCTTTGGTA ATACTCCTTG CTGGTTCACG TTGATTGTTC TATTGAGTTA TAAGAAATGA 127490 .......... .......... .......... .......... .......... .......... 47 TTTTAATTGC ATATGGTTGC TCACAATATT CTGCTCGTGC ATAGAGTCAT TTATCATTTC 127430 |||||| |||||||||| .......... .......... .......... .......... ....AGTCAT TTATCATTTC 63 ACCGAGTCCC GGGCCGGGTA ATGTTCGTGC GGAGTTTCTT GCATATGTCA CCGAGTTCCT 127370 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||| ||| ACCGAGTCCC GGGCCGGGTA ATGTTCGTGC GGAGTTTCTT GCATATGTCA CCGAGTCCCT 123 CACTAGAGGG CCGGGTATGT ATATTATATA TATGATTGGT GATGAGGATG GTTATGATGA 127310 |||||||||| ||||| |||| |||||||||| |||||||||| |||||||||| |||||||||| CACTAGAGGG CCGGGAATGT ATATTATATA TATGATTGGT GATGAGGATG GTTATGATGA 183 TGATGATGAC GGAGATGACG TGATGATTAT TTTGCCGAGC CCCTTACTAG GGAAGCTGGG 127250 |||||||||| |||||||| | |||||| ||| || | ||| |||| ||||| | TGATGATGAC GGAGATGATG TGATGACTAT TTCACTGAGT CCCTCACTAG AGG....... 236 CACCTTAAAT GTTAAATATA TGCATGATTT TCACTTAAAA AGTATATGTG TAGCGATATT 127190 .......... .......... .......... .......... .......... .......... 236 TGTTTCGAGT TGCCACATTG GTATCCTGTC ATCTTTACCT TATGCTTTAC ATACTCAGTA 127130 .......... .......... .......... .......... .......... .......... 236 CATTGGTCCG TACTGGACCC CCCCTTTCCT CGGGGGGGCT GCGTTTCATG CCCGCAGGGT 127070 || |||| .......... .......... .......... .......... .......... ...GCCGGGT 243 GTAGACGCGC AGTTCGGTGA TCCTCCCGCC TAGGATATCT ACTCTGCTGA TTGGGAGAGC 127010 |||||||| | |||| ||||| |||||||||| |||||||||| ||||||||| |||||||||| GTAGACGCTC AGTTTGGTGA TCCTCCCGCC TAGGATATCT ACTCTGCTGT TTGGGAGAGC 303 TCCACTGTTC CGGAGCCCAT TCGTTTTGGT ACATAACTT- TTGTGTAGTC TTTTGCTCGT 126951 |||||||||| ||||||||| |||||||||| ||||||||| || ||||||| ||||||| || TCCACTGTTC CGGAGCCCAG TCGTTTTGGT ACATAACTTC TTATGTAGTC TTTTGCTTGT 363 CTATGGGTAT GGCGGGGCCC TGTCCCGTCG AGTTTCACTA ATGTACCCTT AGAGGTCTGT 126891 |||||||||| ||||||||| ||||||||| |||||||||| | ||| ||| |||||||||| CTATGGGTAT -GCGGGGCCC TGTCCCGTCA AGTTTCACTA CTATACTCTT AGAGGTCTGT 422 GGACATTATG TGGGTTGTAT ATATATGTTT TGGATAATGG TCTGGACATG GTTTGTTTGG 126831 ||||| || |||||||||| | ||||||| | |||||||| |||||||||| |||||||||| AGACATCGTG TGGGTTGTAT AATTATGTTT TTGATAATGG TCTGGACATG GTTTGTTTGG 482 GATGTCCGCT TGTACAGGGG CAGCCTTGTC GGCTGTGTAC ATCATTATGC TTTGAATAGT 126771 ||||||| || |||||| | | || ||||||| || ||||||| ||| || || ||| |||| GATGTCCACT TGTACAAGTG CAACCTTGTC GGTTGTGTAC ATCTTTGTGT ATTGTGTAGT 542 GGCGGCCTTG TCGGCTCGCG TATGCTGTTA TG 126739 ||| |||||| |||||| ||| |||||| ||| || GGCAGCCTTG TCGGCT-GCG TATGCTATTA TG 573 hqPGS_C10HBa0115K16.1-_SGN-E538151+ (128449 128407,127445 127257,127076 126739) ******************************************************************************** EST sequence 145 +strand 644 n (File: SGN-E538156+) 1 GAGAAAACCA GCCATTAAAC TCTTGGACAG CAGCTGCAAA GAAATTGAGT CATTTATCAT 61 TTCACCGAGT CCCGGGCCGG GTAATGTTCG TGCGGAGTTT CTTGCATATG TCACCGAGTC 121 CCTCACTAGA GGGCCGGGAA TGTATATTAT ATATATGATT GGTGATGAGG ATGGTTATGA 181 TGATGATGAT GACGGAGATG ATGTGATGAC TATTTCACTG AGTCCCTCAC TAGAGGGCCG 241 GGTGTAGACG CTCAGTTTGG TGATCCTCCC GCCTAGGATA TCTACTCTGC TGTTTGGGAG 301 AGCTCCACTG TTCCGGAGCC CAGTCGTTGT GGTACATAAC TTCTTATGTA GTCTTTTGCT 361 TGTCTATGGG TATGCGGGGC CCTGTCCCGT CAAGTTTCAC TACTATACTC TTAGAGGTCT 421 GTAGACATCG TGTGGGTTGT ATAATTATGT TTTTGATAAT GGTCTGGACA TGGTTTGTTT 481 GGGATGTCCA CTTGTACAAG TGCAACCTTG TCGGTTGTGT ACATCTTTGT GTATTGTGTA 541 GTGGCAGCCT TGACGGCTGC GTATGCTATT ATGCTTTGAA TAGTGGCAGC CTTGTCGGCT 601 CGCGTATGTT GTTACGGTTG AATGGGTATG ACTCTTTATG AGAT Predicted gene structure (within gDNA segment 128506 to 125777): Exon 1 128449 128407 ( 43 n); cDNA 5 47 ( 43 n); score: 0.837 Intron 1 128406 127446 ( 961 n); Pd: 0.997 (s: 0.84), Pa: 0.963 (s: 1.00) Exon 2 127445 127257 ( 189 n); cDNA 48 236 ( 189 n); score: 0.942 Intron 2 127256 127077 ( 180 n); Pd: 0.000 (s: 0.82), Pa: 0.000 (s: 0.94) Exon 3 127076 126739 ( 338 n); cDNA 237 573 ( 337 n); score: 0.892 MATCH C10HBa0115K16.1- SGN-E538156+ 0.910 570 0.885 C PGS_C10HBa0115K16.1-_SGN-E538156+ (128449 128407,127445 127257,127076 126739) Alignment (genomic DNA sequence = upper lines): AAACCAACCC TGCAACTCTT GGCCAGCAGC TGCAAATAAT TTGGTTAGTA ATCTCCTTGT 128390 |||||| || | ||||||| || ||||||| |||||| || ||| AAACCAGCCA TTAAACTCTT GGACAGCAGC TGCAAAGAAA TTG....... .......... 47 TTGGTGTGTT AATTCTTTAG AATACCCTTG TTAATTATCC ATTAATTTTA AGAAGGGGGC 128330 .......... .......... .......... .......... .......... .......... 47 GTGACCAGTA GCTTAGGAAG TTTGTTTTAG TTATTGAATG TACTAAGTAT GAATGGAAAC 128270 .......... .......... .......... .......... .......... .......... 47 CATAATCGGA TTATTAGTGG TGTCGTGTTG GTGCTTGGGC TGTTTTGATT AAAGCAAACT 128210 .......... .......... .......... .......... .......... .......... 47 GCAGGAAAAT TCTGTTTTGG CATTATGTAT ATGTTGAATG TGATTATGAG TATATACTCC 128150 .......... .......... .......... .......... .......... .......... 47 AAAGGATGAA TACGATAAGG TAGATGTGTT ACGAATTATA AAACGAGTTA TCACTCGGTG 128090 .......... .......... .......... .......... .......... .......... 47 TGTCATTGCT TCGCTGATAT AGTTGCCGAG ATGGAACTGT TTTGGGGAGG GGGCTGTTTA 128030 .......... .......... .......... .......... .......... .......... 47 ATATGATTCT TTGGGTTATA TGTGTTATTG GTATTGTTGT GGATAATTTG GATTGTTGTC 127970 .......... .......... .......... .......... .......... .......... 47 GGATTGGGAC GAAGTAAGGA AAATAGGGGA GGTGCTGCCG AATTTTCGTT AGATTATTAG 127910 .......... .......... .......... .......... .......... .......... 47 CTAGCTTACA AGAAAGTAAA GCACGATGTT TATCTAATTG CGGCACGATT GTTGCTTGTT 127850 .......... .......... .......... .......... .......... .......... 47 ATAGATTAAT AGCTTGAGCA GTAAATATTG GACGTGCGGC TCGATTATAC GGTATGTAAC 127790 .......... .......... .......... .......... .......... .......... 47 GCTGTCCCTT CTTTCTTTGC TTGGCATGAC TTTTAAAAAT AAGCGAATAA CGGACAGATT 127730 .......... .......... .......... .......... .......... .......... 47 TGATACTTAC CTCTAAAGCG TCTAGGTGAT GTATATTCTT GCTTCCACAA TTATTCCTCT 127670 .......... .......... .......... .......... .......... .......... 47 ATATATCGGT TATGTCTAAG GCTATGATGA TCTCTAATAT CTATGGTAAT GCTTCTTAGA 127610 .......... .......... .......... .......... .......... .......... 47 GTCATTGAAA TTTTACGTTT TCATATCGTA TTAAAGGTTC ATAATCTTGA TAAAACATTA 127550 .......... .......... .......... .......... .......... .......... 47 ATCTTTGGTA ATACTCCTTG CTGGTTCACG TTGATTGTTC TATTGAGTTA TAAGAAATGA 127490 .......... .......... .......... .......... .......... .......... 47 TTTTAATTGC ATATGGTTGC TCACAATATT CTGCTCGTGC ATAGAGTCAT TTATCATTTC 127430 |||||| |||||||||| .......... .......... .......... .......... ....AGTCAT TTATCATTTC 63 ACCGAGTCCC GGGCCGGGTA ATGTTCGTGC GGAGTTTCTT GCATATGTCA CCGAGTTCCT 127370 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||| ||| ACCGAGTCCC GGGCCGGGTA ATGTTCGTGC GGAGTTTCTT GCATATGTCA CCGAGTCCCT 123 CACTAGAGGG CCGGGTATGT ATATTATATA TATGATTGGT GATGAGGATG GTTATGATGA 127310 |||||||||| ||||| |||| |||||||||| |||||||||| |||||||||| |||||||||| CACTAGAGGG CCGGGAATGT ATATTATATA TATGATTGGT GATGAGGATG GTTATGATGA 183 TGATGATGAC GGAGATGACG TGATGATTAT TTTGCCGAGC CCCTTACTAG GGAAGCTGGG 127250 |||||||||| |||||||| | |||||| ||| || | ||| |||| ||||| | TGATGATGAC GGAGATGATG TGATGACTAT TTCACTGAGT CCCTCACTAG AGG....... 236 CACCTTAAAT GTTAAATATA TGCATGATTT TCACTTAAAA AGTATATGTG TAGCGATATT 127190 .......... .......... .......... .......... .......... .......... 236 TGTTTCGAGT TGCCACATTG GTATCCTGTC ATCTTTACCT TATGCTTTAC ATACTCAGTA 127130 .......... .......... .......... .......... .......... .......... 236 CATTGGTCCG TACTGGACCC CCCCTTTCCT CGGGGGGGCT GCGTTTCATG CCCGCAGGGT 127070 || |||| .......... .......... .......... .......... .......... ...GCCGGGT 243 GTAGACGCGC AGTTCGGTGA TCCTCCCGCC TAGGATATCT ACTCTGCTGA TTGGGAGAGC 127010 |||||||| | |||| ||||| |||||||||| |||||||||| ||||||||| |||||||||| GTAGACGCTC AGTTTGGTGA TCCTCCCGCC TAGGATATCT ACTCTGCTGT TTGGGAGAGC 303 TCCACTGTTC CGGAGCCCAT TCGTTTTGGT ACATAACTT- TTGTGTAGTC TTTTGCTCGT 126951 |||||||||| ||||||||| ||||| |||| ||||||||| || ||||||| ||||||| || TCCACTGTTC CGGAGCCCAG TCGTTGTGGT ACATAACTTC TTATGTAGTC TTTTGCTTGT 363 CTATGGGTAT GGCGGGGCCC TGTCCCGTCG AGTTTCACTA ATGTACCCTT AGAGGTCTGT 126891 |||||||||| ||||||||| ||||||||| |||||||||| | ||| ||| |||||||||| CTATGGGTAT -GCGGGGCCC TGTCCCGTCA AGTTTCACTA CTATACTCTT AGAGGTCTGT 422 GGACATTATG TGGGTTGTAT ATATATGTTT TGGATAATGG TCTGGACATG GTTTGTTTGG 126831 ||||| || |||||||||| | ||||||| | |||||||| |||||||||| |||||||||| AGACATCGTG TGGGTTGTAT AATTATGTTT TTGATAATGG TCTGGACATG GTTTGTTTGG 482 GATGTCCGCT TGTACAGGGG CAGCCTTGTC GGCTGTGTAC ATCATTATGC TTTGAATAGT 126771 ||||||| || |||||| | | || ||||||| || ||||||| ||| || || ||| |||| GATGTCCACT TGTACAAGTG CAACCTTGTC GGTTGTGTAC ATCTTTGTGT ATTGTGTAGT 542 GGCGGCCTTG TCGGCTCGCG TATGCTGTTA TG 126739 ||| |||||| ||||| ||| |||||| ||| || GGCAGCCTTG ACGGCT-GCG TATGCTATTA TG 573 hqPGS_C10HBa0115K16.1-_SGN-E538156+ (128449 128407,127445 127257,127076 126739) ******************************************************************************** EST sequence 71 -strand 843 n (File: SGN-E544254-) 1 GAGTCATTTA TCATTTCACC GAGTCCCGGG CCGGGTAATG TTCGTGCGGA GTTTCTTGCA 61 TATGTCACCG AGTCCCTCAC TAGAGGGCCG GGAATGTATA TTATATATAT GATTGGTGAT 121 GAGGATGGTT ATGATGATGA TGATGACGGA GATGATGTGA TGACTATTTC ACCGAGTCCC 181 TCACTAGAGG GCCGGGTACT ATGATGTATA TATAATGATG ATTATTTTGC CGAGTCCCTT 241 ACTAGGGAAG TTAGGCATCT TATATGTTAA AGATATGCAT GATTTTCACT TAAAAAGTAC 301 ATGTGTAGAG ATATCTTGTT TCGACTTATC ATGTTGGTAT CCTGTCATCT TTACCTTATG 361 CTTTACATAC TCAGTACATT GTCCGTACTG ACCCCCTTTT CTCGGGGGGC TGCGTTTCAT 421 GCCCGCAGGT GTAGACGCTC AGTTCGGTGA TCCTCCCGCC TAGGATATCT ACTCTGCTTT 481 TTGGGAGAGC TCCACTGTTC CGGAGCCCAG TCGTTTTGGT ACATAACTTC TTATGTAGTC 541 TTTTGCTTGT CTATGGGTAT GGCGGGGCCC TGTCCCGTCA AGTTTCACTA CTATACTCTT 601 AGAGGTCTGT AGACATCGTG TGGGTTGTAT AATTATGTTT TGGATAATGG TCTGGACATG 661 GTTTGTTTGG GATGTCCATT TGTACAAGTG CAGCCTTGTC GGTTGTGAAC ATCATTGTGT 721 ATTGTGTAGT GGCAGCCTCG TCGGCTGCGT ATGCTATTAT GTTTTGGATA GTGGCGGCCT 781 TGTCGGCTCG CATATGTTGT TACGATTTAA TGGTTATGAC TCTTTATGAG AAAAAAAAAG 841 AAA Predicted gene structure (within gDNA segment 128056 to 124564): Exon 1 127390 127336 ( 55 n); cDNA 161 214 ( 54 n); score: 0.818 Intron 1 127335 127291 ( 45 n); Pd: 0.000 (s: 0.84), Pa: 0.000 (s: 0.88) Exon 2 127290 126739 ( 552 n); cDNA 215 761 ( 547 n); score: 0.899 PPA cDNA 829 839 MATCH C10HBa0115K16.1- SGN-E544254- 0.891 607 0.720 C PGS_C10HBa0115K16.1-_SGN-E544254- (127390 127336,127290 126739) Alignment (genomic DNA sequence = upper lines): TGCATATGTC ACCGAGTTCC TCACTAGAGG GCCGGGTATG TATATTATAT ATATGATTGG 127331 || ||| || ||||||| || |||||||||| |||||||| ||| | ||| |||| TGACTATTTC ACCGAGTCCC TCACTAGAGG GCCGGGTA-C TATGATGTAT ATATA..... 214 TGATGAGGAT GGTTATGATG ATGATGATGA CGGAGATGAC GTGATGATTA TTTTGCCGAG 127271 ||||||||| |||||||||| .......... .......... .......... .......... ATGATGATTA TTTTGCCGAG 234 CCCCTTACTA GGGAAGCTGG GCACCTTAAA TGTTAAATAT ATGCATGATT TTCACTTAAA 127211 ||||||||| |||||| | | ||| |||| | ||||||| || |||||||||| |||||||||| TCCCTTACTA GGGAAGTTAG GCATCTTATA TGTTAAAGAT ATGCATGATT TTCACTTAAA 294 AAGTATATGT GTAGCGATAT -TTGTTTCGA GTTGCCACAT TGGTATCCTG TCATCTTTAC 127152 ||||| |||| |||| ||||| ||||||||| || || | |||||||||| |||||||||| AAGTACATGT GTAGAGATAT CTTGTTTCGA CTTATCATGT TGGTATCCTG TCATCTTTAC 354 CTTATGCTTT ACATACTCAG TACATTGGTC CGTACTGGAC CCCCCCTTTC CTCGGGGGGG 127092 |||||||||| |||||||||| |||||| ||| |||||| || |||||||| ||| |||||| CTTATGCTTT ACATACTCAG TACATT-GTC CGTACT-GA- -CCCCCTTTT CTC-GGGGGG 409 CTGCGTTTCA TGCCCGCAGG GTGTAGACGC GCAGTTCGGT GATCCTCCCG CCTAGGATAT 127032 |||||||||| |||||||| | |||||||||| ||||||||| |||||||||| |||||||||| CTGCGTTTCA TGCCCGCA-G GTGTAGACGC TCAGTTCGGT GATCCTCCCG CCTAGGATAT 468 CTACTCTGCT GATTGGGAGA GCTCCACTGT TCCGGAGCCC ATTCGTTTTG GTACATAACT 126972 |||||||||| |||||||| |||||||||| |||||||||| | |||||||| |||||||||| CTACTCTGCT TTTTGGGAGA GCTCCACTGT TCCGGAGCCC AGTCGTTTTG GTACATAACT 528 T-TTGTGTAG TCTTTTGCTC GTCTATGGGT ATGGCGGGGC CCTGTCCCGT CGAGTTTCAC 126913 | || ||||| ||||||||| |||||||||| |||||||||| |||||||||| | |||||||| TCTTATGTAG TCTTTTGCTT GTCTATGGGT ATGGCGGGGC CCTGTCCCGT CAAGTTTCAC 588 TAATGTACCC TTAGAGGTCT GTGGACATTA TGTGGGTTGT ATATATATGT TTTGGATAAT 126853 || | ||| | |||||||||| || ||||| |||||||||| ||| ||||| |||||||||| TACTATACTC TTAGAGGTCT GTAGACATCG TGTGGGTTGT ATAATTATGT TTTGGATAAT 648 GGTCTGGACA TGGTTTGTTT GGGATGTCCG CTTGTACAGG GGCAGCCTTG TCGGCTGTGT 126793 |||||||||| |||||||||| ||||||||| ||||||| | ||||||||| |||| |||| GGTCTGGACA TGGTTTGTTT GGGATGTCCA TTTGTACAAG TGCAGCCTTG TCGGTTGTGA 708 ACATCATTAT GCTTTGAATA GTGGCGGCCT TGTCGGCTCG CGTATGCTGT TATG 126739 |||||||| | | ||| || ||||| |||| ||||||| | |||||||| | |||| ACATCATTGT GTATTGTGTA GTGGCAGCCT CGTCGGCT-G CGTATGCTAT TATG 761 hqPGS_C10HBa0115K16.1-_SGN-E544254- (127390 127336,127290 126739) ******************************************************************************** EST sequence 211 +strand 470 n (File: SGN-E268096+) 1 GAAAACCAGC CATTAAACTC TTGGACAGCA GCTGCAAAGA AATTGAGTCA TTTATCATTG 61 CACCGAGTCC CGGGCCGGGT AATGTTCGTG CGGAGTTTCT TGCATATGTC ACCGAGTCCC 121 TCACTAGAGG GCCGGGAATG TATATTATAT ATATGATTGG TGATGAGGAT GGTTATGATG 181 ATGATGATGA CGGAGATGAT GTGATGACTA TTTCACTGAG TCCCTCACTA GAGGGCCGGG 241 TGTAGACGCT CAGTTTGGTG ATCCTCCCGC CTAGGATATC TACTCTGCTG TTTGGGAGAG 301 CTCCACTGTT CCGGAGCCCA GTCGTTTTGG TACATAACTT CTTATGTAGT CTTTTGCTTG 361 TCTATGGGTA TGCGGGGCCC TGTCCCGTCA AGTTTCACTA CTATACTCTT AGAGGTCTGT 421 AGACATCGTG TGGGTAGTAT AATTATGTTT TTGATAATGG GCTGGACATG Predicted gene structure (within gDNA segment 128630 to 125061): Exon 1 128449 128407 ( 43 n); cDNA 3 45 ( 43 n); score: 0.837 Intron 1 128406 127446 ( 961 n); Pd: 0.997 (s: 0.84), Pa: 0.963 (s: 0.98) Exon 2 127445 127257 ( 189 n); cDNA 46 234 ( 189 n); score: 0.937 Intron 2 127256 127077 ( 180 n); Pd: 0.000 (s: 0.82), Pa: 0.000 (s: 0.94) Exon 3 127076 126841 ( 236 n); cDNA 235 470 ( 236 n); score: 0.905 MATCH C10HBa0115K16.1- SGN-E268096+ 0.919 468 0.996 C PGS_C10HBa0115K16.1-_SGN-E268096+ (128449 128407,127445 127257,127076 126841) Alignment (genomic DNA sequence = upper lines): AAACCAACCC TGCAACTCTT GGCCAGCAGC TGCAAATAAT TTGGTTAGTA ATCTCCTTGT 128390 |||||| || | ||||||| || ||||||| |||||| || ||| AAACCAGCCA TTAAACTCTT GGACAGCAGC TGCAAAGAAA TTG....... .......... 45 TTGGTGTGTT AATTCTTTAG AATACCCTTG TTAATTATCC ATTAATTTTA AGAAGGGGGC 128330 .......... .......... .......... .......... .......... .......... 45 GTGACCAGTA GCTTAGGAAG TTTGTTTTAG TTATTGAATG TACTAAGTAT GAATGGAAAC 128270 .......... .......... .......... .......... .......... .......... 45 CATAATCGGA TTATTAGTGG TGTCGTGTTG GTGCTTGGGC TGTTTTGATT AAAGCAAACT 128210 .......... .......... .......... .......... .......... .......... 45 GCAGGAAAAT TCTGTTTTGG CATTATGTAT ATGTTGAATG TGATTATGAG TATATACTCC 128150 .......... .......... .......... .......... .......... .......... 45 AAAGGATGAA TACGATAAGG TAGATGTGTT ACGAATTATA AAACGAGTTA TCACTCGGTG 128090 .......... .......... .......... .......... .......... .......... 45 TGTCATTGCT TCGCTGATAT AGTTGCCGAG ATGGAACTGT TTTGGGGAGG GGGCTGTTTA 128030 .......... .......... .......... .......... .......... .......... 45 ATATGATTCT TTGGGTTATA TGTGTTATTG GTATTGTTGT GGATAATTTG GATTGTTGTC 127970 .......... .......... .......... .......... .......... .......... 45 GGATTGGGAC GAAGTAAGGA AAATAGGGGA GGTGCTGCCG AATTTTCGTT AGATTATTAG 127910 .......... .......... .......... .......... .......... .......... 45 CTAGCTTACA AGAAAGTAAA GCACGATGTT TATCTAATTG CGGCACGATT GTTGCTTGTT 127850 .......... .......... .......... .......... .......... .......... 45 ATAGATTAAT AGCTTGAGCA GTAAATATTG GACGTGCGGC TCGATTATAC GGTATGTAAC 127790 .......... .......... .......... .......... .......... .......... 45 GCTGTCCCTT CTTTCTTTGC TTGGCATGAC TTTTAAAAAT AAGCGAATAA CGGACAGATT 127730 .......... .......... .......... .......... .......... .......... 45 TGATACTTAC CTCTAAAGCG TCTAGGTGAT GTATATTCTT GCTTCCACAA TTATTCCTCT 127670 .......... .......... .......... .......... .......... .......... 45 ATATATCGGT TATGTCTAAG GCTATGATGA TCTCTAATAT CTATGGTAAT GCTTCTTAGA 127610 .......... .......... .......... .......... .......... .......... 45 GTCATTGAAA TTTTACGTTT TCATATCGTA TTAAAGGTTC ATAATCTTGA TAAAACATTA 127550 .......... .......... .......... .......... .......... .......... 45 ATCTTTGGTA ATACTCCTTG CTGGTTCACG TTGATTGTTC TATTGAGTTA TAAGAAATGA 127490 .......... .......... .......... .......... .......... .......... 45 TTTTAATTGC ATATGGTTGC TCACAATATT CTGCTCGTGC ATAGAGTCAT TTATCATTTC 127430 |||||| |||||||| | .......... .......... .......... .......... ....AGTCAT TTATCATTGC 61 ACCGAGTCCC GGGCCGGGTA ATGTTCGTGC GGAGTTTCTT GCATATGTCA CCGAGTTCCT 127370 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||| ||| ACCGAGTCCC GGGCCGGGTA ATGTTCGTGC GGAGTTTCTT GCATATGTCA CCGAGTCCCT 121 CACTAGAGGG CCGGGTATGT ATATTATATA TATGATTGGT GATGAGGATG GTTATGATGA 127310 |||||||||| ||||| |||| |||||||||| |||||||||| |||||||||| |||||||||| CACTAGAGGG CCGGGAATGT ATATTATATA TATGATTGGT GATGAGGATG GTTATGATGA 181 TGATGATGAC GGAGATGACG TGATGATTAT TTTGCCGAGC CCCTTACTAG GGAAGCTGGG 127250 |||||||||| |||||||| | |||||| ||| || | ||| |||| ||||| | TGATGATGAC GGAGATGATG TGATGACTAT TTCACTGAGT CCCTCACTAG AGG....... 234 CACCTTAAAT GTTAAATATA TGCATGATTT TCACTTAAAA AGTATATGTG TAGCGATATT 127190 .......... .......... .......... .......... .......... .......... 234 TGTTTCGAGT TGCCACATTG GTATCCTGTC ATCTTTACCT TATGCTTTAC ATACTCAGTA 127130 .......... .......... .......... .......... .......... .......... 234 CATTGGTCCG TACTGGACCC CCCCTTTCCT CGGGGGGGCT GCGTTTCATG CCCGCAGGGT 127070 || |||| .......... .......... .......... .......... .......... ...GCCGGGT 241 GTAGACGCGC AGTTCGGTGA TCCTCCCGCC TAGGATATCT ACTCTGCTGA TTGGGAGAGC 127010 |||||||| | |||| ||||| |||||||||| |||||||||| ||||||||| |||||||||| GTAGACGCTC AGTTTGGTGA TCCTCCCGCC TAGGATATCT ACTCTGCTGT TTGGGAGAGC 301 TCCACTGTTC CGGAGCCCAT TCGTTTTGGT ACATAACTT- TTGTGTAGTC TTTTGCTCGT 126951 |||||||||| ||||||||| |||||||||| ||||||||| || ||||||| ||||||| || TCCACTGTTC CGGAGCCCAG TCGTTTTGGT ACATAACTTC TTATGTAGTC TTTTGCTTGT 361 CTATGGGTAT GGCGGGGCCC TGTCCCGTCG AGTTTCACTA ATGTACCCTT AGAGGTCTGT 126891 |||||||||| ||||||||| ||||||||| |||||||||| | ||| ||| |||||||||| CTATGGGTAT -GCGGGGCCC TGTCCCGTCA AGTTTCACTA CTATACTCTT AGAGGTCTGT 420 GGACATTATG TGGGTTGTAT ATATATGTTT TGGATAATGG TCTGGACATG 126841 ||||| || ||||| |||| | ||||||| | |||||||| ||||||||| AGACATCGTG TGGGTAGTAT AATTATGTTT TTGATAATGG GCTGGACATG 470 hqPGS_C10HBa0115K16.1-_SGN-E268096+ (128449 128407,127445 127257,127076 126841) ******************************************************************************** EST sequence 171 +strand 453 n (File: SGN-E303256+) 1 AACCAGCCAT TAAACTCTTG GACAGCAGCT GCAAAGAAAT TGGTGTAGAC GCTCAGTTCG 61 GTGATCCTCC CGCCTAGGAT ATCTACTCTG CTTTTTGGGA GAGCTCCACT GTTCCGGAGC 121 CCAGTCGTTT TGGTACATAA CTTCTTATGT AGTCTTTTGC TTGTCTATGG GTATGGCGGG 181 GCCCTGTCCC GTCAAGTTTC ACTACTATAC TCTTAGAGGT CTGTAGACAT CGTGTGGGTT 241 GTATAATTAT GTTTTGGATA ATGGTCTGGA CATGGTTTGT TTGGGATGTC CATTTGTACA 301 AGTGCAGCCT TGTCGGTTGT GAACATCATT GTGTATTGTG TAGTGGCAGC CTCGTCGGCT 361 GCGTATGCTA TTATGTTTTG GATAGTGGCG GCCTTGTCGG CTCGCATATG TTGTTACGAT 421 TTAATGGTTA TGACTCTTTA TGAAAAAAAA AAA Predicted gene structure (within gDNA segment 128190 to 124594): Exon 1 127072 126739 ( 334 n); cDNA 42 375 ( 334 n); score: 0.903 PPA cDNA 443 453 MATCH C10HBa0115K16.1- SGN-E303256+ 0.903 334 0.737 C PGS_C10HBa0115K16.1-_SGN-E303256+ (127072 126739) Alignment (genomic DNA sequence = upper lines): GGTGTAGACG CGCAGTTCGG TGATCCTCCC GCCTAGGATA TCTACTCTGC TGATTGGGAG 127013 |||||||||| | |||||||| |||||||||| |||||||||| |||||||||| | ||||||| GGTGTAGACG CTCAGTTCGG TGATCCTCCC GCCTAGGATA TCTACTCTGC TTTTTGGGAG 101 AGCTCCACTG TTCCGGAGCC CATTCGTTTT GGTACATAAC TT-TTGTGTA GTCTTTTGCT 126954 |||||||||| |||||||||| || ||||||| |||||||||| || || |||| |||||||||| AGCTCCACTG TTCCGGAGCC CAGTCGTTTT GGTACATAAC TTCTTATGTA GTCTTTTGCT 161 CGTCTATGGG TATGGCGGGG CCCTGTCCCG TCGAGTTTCA CTAATGTACC CTTAGAGGTC 126894 ||||||||| |||||||||| |||||||||| || ||||||| ||| | ||| |||||||||| TGTCTATGGG TATGGCGGGG CCCTGTCCCG TCAAGTTTCA CTACTATACT CTTAGAGGTC 221 TGTGGACATT ATGTGGGTTG TATATATATG TTTTGGATAA TGGTCTGGAC ATGGTTTGTT 126834 ||| ||||| ||||||||| |||| |||| |||||||||| |||||||||| |||||||||| TGTAGACATC GTGTGGGTTG TATAATTATG TTTTGGATAA TGGTCTGGAC ATGGTTTGTT 281 TGGGATGTCC GCTTGTACAG GGGCAGCCTT GTCGGCTGTG TACATCATTA TGCTTTGAAT 126774 |||||||||| ||||||| | |||||||| ||||| |||| |||||||| || ||| | TGGGATGTCC ATTTGTACAA GTGCAGCCTT GTCGGTTGTG AACATCATTG TGTATTGTGT 341 AGTGGCGGCC TTGTCGGCTC GCGTATGCTG TTATG 126739 |||||| ||| | ||||||| ||||||||| ||||| AGTGGCAGCC TCGTCGGCT- GCGTATGCTA TTATG 375 hqPGS_C10HBa0115K16.1-_SGN-E303256+ (127072 126739) ******************************************************************************** EST sequence 169 +strand 691 n (File: SGN-E328093+) 1 GAAAACCAGC CATTAAACTC TTGGACAGCA GCTGCAAAGA AATTGGTTAG TAATCTCTTT 61 GCTTGGTTTG TTAATTCCTT AGAATACCTT TGTTAATTAG ACATTTATGT TAAGAAGGGG 121 GACGTGAACA GTATCTTAGG AATTTGTTTT AGTTATTGAA TGTGCTAAGG ATGAGCAGAA 181 ACCATGATCG GATTGCTAGC GGTGTTATAT TTGTGTTGGG CTGTTTTGAT TAAAGTAAGC 241 TGCTGGAAAT TCTGTTTTGG TGTTATGCAT ATGTTAATAT GATTATGGGT ATATACTCCA 301 AAGGATGAAT ACAATAAGGT AGATGTGTTG CGAATTATAA AACGAATTAT CGGTCGGTGT 361 GTCGTTGTTT TGTTACTATG GTTGCTAAAA ACGGAACTGT TTTGGGGGAG GCTGTTTAAT 421 ATGATTTGTT GGATTATATG TGTTGTTGGT ATTGTTGTGG ATAATTTGGG TTGTTGTTGG 481 ATTGGGATGA AGTAAAGAAA ATAGGGGAAG TGCTGCCGGA TTTTCGTTAG ATTATTAGCT 541 AGCTTACATA AGTAGTAAGC GCGACATTTA TCTAATTGCG GCACGATTGG TGCTTGTTAT 601 AGATTTATAC CTTGAGCAGT AAATATTGGA CGTACGGCTC GACTATTCGG TATGTAACGC 661 TATCCTTTCC TTCTTTGTTT GGCATGACCT T Predicted gene structure (within gDNA segment 131640 to 126229): Exon 1 128449 127757 ( 693 n); cDNA 3 691 ( 689 n); score: 0.859 MATCH C10HBa0115K16.1- SGN-E328093+ 0.859 693 1.003 C PGS_C10HBa0115K16.1-_SGN-E328093+ (128449 127757) Alignment (genomic DNA sequence = upper lines): AAACCAACCC TGCAACTCTT GGCCAGCAGC TGCAAATAAT TTGGTTAGTA ATCTCCTTGT 128390 |||||| || | ||||||| || ||||||| |||||| || |||||||||| ||||| ||| AAACCAGCCA TTAAACTCTT GGACAGCAGC TGCAAAGAAA TTGGTTAGTA ATCTCTTTGC 62 TTGGTGTGTT AATTCTTTAG AATACCCTTG TTAATTATCC ATTAATTTTA AGAAGGGGG- 128331 ||||| |||| ||||| |||| |||||| ||| ||||||| | ||| || ||| ||||||||| TTGGTTTGTT AATTCCTTAG AATACCTTTG TTAATTAGAC ATTTATGTTA AGAAGGGGGA 122 CGTGACCAGT AGCTTAGGAA GTTTGTTTTA GTTATTGAAT GTACTAAGTA TGAATGGAAA 128271 ||||| |||| | |||||||| ||||||||| |||||||||| || ||||| | ||| |||| CGTGAACAGT ATCTTAGGAA -TTTGTTTTA GTTATTGAAT GTGCTAAGGA TGAGCAGAAA 181 CCATAATCGG ATTATTAGTG GTGTCGTGTT GGTGCTTGGG CTGTTTTGAT TAAAGCAAAC 128211 |||| ||||| ||| ||| | |||| | || ||| ||||| |||||||||| ||||| || | CCATGATCGG ATTGCTAGCG GTGTTATATT TGTG-TTGGG CTGTTTTGAT TAAAGTAAGC 240 TGCAGGAAAA TTCTGTTTTG GCATTATGTA TATGTTGAAT GTGATTATGA GTATATACTC 128151 ||| || ||| |||||||||| | ||||| | |||||| ||| |||||||| |||||||||| TGCTGG-AAA TTCTGTTTTG GTGTTATGCA TATGTT-AAT ATGATTATGG GTATATACTC 298 CAAAGGATGA ATACGATAAG GTAGATGTGT TACGAATTAT AAAACGAGTT ATCACTCGGT 128091 |||||||||| |||| ||||| |||||||||| | |||||||| ||||||| || ||| ||||| CAAAGGATGA ATACAATAAG GTAGATGTGT TGCGAATTAT AAAACGAATT ATCGGTCGGT 358 GTGTCATTGC TTCGCTGATA TAGTTGC-CG AGATGGAACT GTTTTGGGGA GGGGGCTGTT 128032 ||||| ||| || | | || | ||||| | | |||||| ||||| ||| || ||||||| GTGTCGTTGT TTTGTTACTA TGGTTGCTAA AAACGGAACT GTTTT-GGG- GGAGGCTGTT 416 TAATATGATT CTTTGGGTTA TATGTGTTAT TGGTATTGTT GTGGATAATT TGGATTGTTG 127972 |||||||||| |||| ||| |||||||| | |||||||||| |||||||||| ||| |||||| TAATATGATT TGTTGGATTA TATGTGTTGT TGGTATTGTT GTGGATAATT TGGGTTGTTG 476 TCGGATTGGG ACGAAGTAAG GAAAATAGGG GAGGTGCTGC CGAATTTTCG TTAGATTATT 127912 | |||||||| | ||||||| |||||||||| || ||||||| || ||||||| |||||||||| TTGGATTGGG ATGAAGTAAA GAAAATAGGG GAAGTGCTGC CGGATTTTCG TTAGATTATT 536 AGCTAGCTTA CA-AGAAAGT AAAGCACGAT GTTTATCTAA TTGCGGCACG ATTGTTGCTT 127853 |||||||||| || | ||| |||| ||| ||||||||| |||||||||| |||| ||||| AGCTAGCTTA CATAAGTAGT -AAGCGCGAC ATTTATCTAA TTGCGGCACG ATTGGTGCTT 595 GTTATAGATT AATAGCTTGA GCAGTAAATA TTGGACGTGC GGCTCGATTA TACGGTATGT 127793 |||||||||| ||| ||||| |||||||||| |||||||| | ||||||| || | |||||||| GTTATAGATT TATACCTTGA GCAGTAAATA TTGGACGTAC GGCTCGACTA TTCGGTATGT 655 AACGCTGTCC CTTCTTTCTT TGCTTGGCAT GACTTT 127757 |||||| ||| ||| ||||| || ||||||| ||| || AACGCTATCC TTTCCTTCTT TGTTTGGCAT GACCTT 691 hqPGS_C10HBa0115K16.1-_SGN-E328093+ (128449 127757) ******************************************************************************** EST sequence 248 +strand 455 n (File: SGN-E298250+) 1 AAATGGAGAA ACCAACCCTG CAACTCTTGG CCAGTAGCTG CAAATAATTT GGGGAGTAAT 61 CTCCTTGTTT GGTGTGTTAA TTCTTTAGAA CACCCTTGTT AATTATCCAT TAATTTTAAG 121 AAGGGGGCGT GACCAGTTGC TTACGAAGTT TGTTTTAGTT ATTGAATGTG CTAAGTATGA 181 ATGGAAACCA TAATCGGATT ATTAGTGGTG TCGTGTTGGT GCTTGGGCTG TTTTGATTAA 241 AGCAAACTGC AGGAAAATTC TATTTTGGCA TTATGTATAT GCTGAATGTG ATTATGAGTA 301 TATACTCCAA CGGATGAATA CGATTAGGTA AATGTGTTGC GAATTATAAA ACGAGTTATC 361 GCTCGGTGTG TCGGTGCTTC GCTGCTATAG TTGCCCAGAC GGAACTGTTT TGGGGAGGGG 421 GCTGCCTAAT GTGATACTTC GGGTTATATG TGTTA Predicted gene structure (within gDNA segment 129057 to 126088): Exon 1 128457 128003 ( 455 n); cDNA 1 455 ( 455 n); score: 0.947 MATCH C10HBa0115K16.1- SGN-E298250+ 0.947 455 1.000 C PGS_C10HBa0115K16.1-_SGN-E298250+ (128457 128003) Alignment (genomic DNA sequence = upper lines): AAATGGAGAA ACCAACCCTG CAACTCTTGG CCAGCAGCTG CAAATAATTT GGTTAGTAAT 128398 |||||||||| |||||||||| |||||||||| |||| ||||| |||||||||| || |||||| AAATGGAGAA ACCAACCCTG CAACTCTTGG CCAGTAGCTG CAAATAATTT GGGGAGTAAT 60 CTCCTTGTTT GGTGTGTTAA TTCTTTAGAA TACCCTTGTT AATTATCCAT TAATTTTAAG 128338 |||||||||| |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| CTCCTTGTTT GGTGTGTTAA TTCTTTAGAA CACCCTTGTT AATTATCCAT TAATTTTAAG 120 AAGGGGGCGT GACCAGTAGC TTAGGAAGTT TGTTTTAGTT ATTGAATGTA CTAAGTATGA 128278 |||||||||| ||||||| || ||| |||||| |||||||||| ||||||||| |||||||||| AAGGGGGCGT GACCAGTTGC TTACGAAGTT TGTTTTAGTT ATTGAATGTG CTAAGTATGA 180 ATGGAAACCA TAATCGGATT ATTAGTGGTG TCGTGTTGGT GCTTGGGCTG TTTTGATTAA 128218 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATGGAAACCA TAATCGGATT ATTAGTGGTG TCGTGTTGGT GCTTGGGCTG TTTTGATTAA 240 AGCAAACTGC AGGAAAATTC TGTTTTGGCA TTATGTATAT GTTGAATGTG ATTATGAGTA 128158 |||||||||| |||||||||| | |||||||| |||||||||| | |||||||| |||||||||| AGCAAACTGC AGGAAAATTC TATTTTGGCA TTATGTATAT GCTGAATGTG ATTATGAGTA 300 TATACTCCAA AGGATGAATA CGATAAGGTA GATGTGTTAC GAATTATAAA ACGAGTTATC 128098 |||||||||| ||||||||| |||| ||||| ||||||| | |||||||||| |||||||||| TATACTCCAA CGGATGAATA CGATTAGGTA AATGTGTTGC GAATTATAAA ACGAGTTATC 360 ACTCGGTGTG TCATTGCTTC GCTGATATAG TTGCCGAGAT GGAACTGTTT TGGGGAGGGG 128038 ||||||||| || |||||| |||| ||||| ||||| ||| |||||||||| |||||||||| GCTCGGTGTG TCGGTGCTTC GCTGCTATAG TTGCCCAGAC GGAACTGTTT TGGGGAGGGG 420 GCTGTTTAAT ATGATTCTTT GGGTTATATG TGTTA 128003 |||| |||| |||| ||| |||||||||| ||||| GCTGCCTAAT GTGATACTTC GGGTTATATG TGTTA 455 hqPGS_C10HBa0115K16.1-_SGN-E298250+ (128457 128003) ******************************************************************************** EST sequence 19 -strand 730 n (File: SGN-E379982-) 1 AAAGGTAAGT TCATTTCATA CTTCAAGGCC GGGAAGATGT TTAGAAAAGG CTATATTTAC 61 CATCTGATTC GGGTGCATGA CATAAAGGCA GAGGCACTGA CTCTTCAATC AGTCTCGGTA 121 GTTAATGAAT TTCCTGATGT ATTCCCCGAG GAACTTCCAG GCCTTCCTCC AGAACGGGAG 181 ATAGAGTTTA CTATAGATGT ACTGCCAGAT ACCCAACCTA TATCTATACC TCCTTATAGA 241 ATGGCACCTG CTGAGTTGAA AGAATTGAAA GAGCAATTGA GGGATTTACT AGAAAAGGGC 301 TTCATCAGGC CTAGTACGTC ACCTTGGGGA GCACCGGTAC TATTTGTGAG GAAGAAGGAT 361 GGGTCGCTCC GGATGTGCAT TGATTATAGG CAGCTGAACA AAGTAACAAT AATGAACAGG 421 TATCCCCTCC CAAGGATTGA CGATCTATTT GACCAGTTGC AGGGTGCAAA GGGTTTTTCA 481 AAGATAGACT TGCGGTCAGG TTATCATCAG GTACGGGTTA GGGAGGCAGA TATCCCAATG 541 ACGGCATTCC GGACCCGATA TGGGCATTAT GTGTTTAGAG TGTTGTCTTT TGGGCTGACT 601 ATTGCTCCAG CGGTATTCAT GGATTTAATG AATTGAGTAT TTAATCCATT CCTTGATATG 661 TTTGTTATTG GATTTATAGA CGATATTCTG GTCTATTCAC GTTCAGAAGA GGAGCATGAA 721 GACTATTTAA Predicted gene structure (within gDNA segment 132647 to 130600): Exon 1 132037 131308 ( 730 n); cDNA 1 730 ( 730 n); score: 0.963 MATCH C10HBa0115K16.1- SGN-E379982- 0.963 730 1.000 C PGS_C10HBa0115K16.1-_SGN-E379982- (132037 131308) Alignment (genomic DNA sequence = upper lines): AAAGGTAAGT TCATTTCATA CCTCAAGGCC GGGAAGATGG TTAGAAAAGG CTATATTTAC 131978 |||||||||| |||||||||| | |||||||| ||||||||| |||||||||| |||||||||| AAAGGTAAGT TCATTTCATA CTTCAAGGCC GGGAAGATGT TTAGAAAAGG CTATATTTAC 60 CATCTGATTC GGGTGCATGA CATAAAGGCA GAGGCACCGA CTCTTCAATC AGTCCCGGTA 131918 |||||||||| |||||||||| |||||||||| ||||||| || |||||||||| |||| ||||| CATCTGATTC GGGTGCATGA CATAAAGGCA GAGGCACTGA CTCTTCAATC AGTCTCGGTA 120 GTTAATGAAT TTCCTGATGT ATTCCCCGAG GAACTTCCAG GCCTTCCTCC AGAACGGGAG 131858 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTAATGAAT TTCCTGATGT ATTCCCCGAG GAACTTCCAG GCCTTCCTCC AGAACGGGAG 180 ATAGAGTTTA CTATAGATGT ACTGCCAGAT ACCCAGCCTA TATCTATACC TCCTTTTAGA 131798 |||||||||| |||||||||| |||||||||| ||||| |||| |||||||||| ||||| |||| ATAGAGTTTA CTATAGATGT ACTGCCAGAT ACCCAACCTA TATCTATACC TCCTTATAGA 240 ATGGCACCTG CTGAGTTGAA AGAATTGAAA GAGCAATTGA GGGATTTGCT AGAAAAGGGC 131738 |||||||||| |||||||||| |||||||||| |||||||||| ||||||| || |||||||||| ATGGCACCTG CTGAGTTGAA AGAATTGAAA GAGCAATTGA GGGATTTACT AGAAAAGGGC 300 TTCATCAGGC CTAGTACGTC ACCTTGGGGA GCACCAGTAC TGTTTGTGAG GAAGAAGGAT 131678 |||||||||| |||||||||| |||||||||| ||||| |||| | |||||||| |||||||||| TTCATCAGGC CTAGTACGTC ACCTTGGGGA GCACCGGTAC TATTTGTGAG GAAGAAGGAT 360 GGGTCGCTGC GGATGTGCAT TGATTATAGG CAGTTGAACA AAGTAACAAT AAAGAACAGG 131618 |||||||| | |||||||||| |||||||||| ||| |||||| |||||||||| || ||||||| GGGTCGCTCC GGATGTGCAT TGATTATAGG CAGCTGAACA AAGTAACAAT AATGAACAGG 420 TATCCCCTCC CAAGGATTGA CGATCTATTT GACCAGTTGC AGGGTGCAAA GTGTTTTTCA 131558 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| | |||||||| TATCCCCTCC CAAGGATTGA CGATCTATTT GACCAGTTGC AGGGTGCAAA GGGTTTTTCA 480 AAGATAGACT TGCGGTCAGG TTATCATCAG GTGCGGGTAA GGGAGGCAGA TATTCCAAAG 131498 |||||||||| |||||||||| |||||||||| || ||||| | |||||||||| ||| |||| | AAGATAGACT TGCGGTCAGG TTATCATCAG GTACGGGTTA GGGAGGCAGA TATCCCAATG 540 ACAGCATTCC GGACCCGATA TGGGCATTAT GAGTTTAGAG TGCTGTCTTT TGGGCTGACT 131438 || ||||||| |||||||||| |||||||||| | |||||||| || ||||||| |||||||||| ACGGCATTCC GGACCCGATA TGGGCATTAT GTGTTTAGAG TGTTGTCTTT TGGGCTGACT 600 AATGCTCCAG CGGTATTCAT GGATTTAATG AATCGAGTAT TTAAACCATT CCTTGATATG 131378 | |||||||| |||||||||| |||||||||| ||| |||||| |||| ||||| |||||||||| ATTGCTCCAG CGGTATTCAT GGATTTAATG AATTGAGTAT TTAATCCATT CCTTGATATG 660 TTTGTTATTG TATTTATAGA CGATATTCTG GTCTATTCAC GTTCAGAAGA GGAGCATGCA 131318 |||||||||| ||||||||| |||||||||| |||||||||| |||||||||| |||||||| | TTTGTTATTG GATTTATAGA CGATATTCTG GTCTATTCAC GTTCAGAAGA GGAGCATGAA 720 GATCATTTAA 131308 || |||||| GACTATTTAA 730 hqPGS_C10HBa0115K16.1-_SGN-E379982- (132037 131308) ******************************************************************************** EST sequence 94 -strand 521 n (File: SGN-E201553-) 1 TACCCAACCT ATATCTATAC CTCCTTATAG AATGGCACCT GCTGAGTTGA AAGAATTGAA 61 AGAGCAATTG AGGGATTTAC TAGAAAAGGG CTTCATCAGG CCTAGTACGT CACCTTGGGG 121 AGCACCGGTA CTATTTGTGA GGAAGAAGGA TGGGTCGCTC CGGATGTGCA TTGATTATAG 181 GCAGCTGAAC AAAGTAACAA TAATGAACAG GTATCCCCTC CCAAGGATTG ACGATCTATT 241 TGACCAGTTG CAGGGTGCAA AGGGTTTTTC AAAGATAGAC TTGCGGTCAG GTTATCATCA 301 GGTACGGGTT AGGGAGGCAG ATATCCCAAT GACGGCATTC CGGACCCGAT ATGGGCATTA 361 TGTGTTTAGA GTGTTGTCTT TTGGGCTGAC TATTGCTCCA GCGGTATTCA TGGATTTAAT 421 GAATTGAGTA TTTAATCCAT TCCTTGATAT GTTTGTTATT GGATTTATAG CCCCTATTAT 481 GGTCTATTCA CGTTCAGAAA AGGAGCATGA AGACTATTTA A Predicted gene structure (within gDNA segment 132501 to 130510): Exon 1 131828 131308 ( 521 n); cDNA 1 521 ( 521 n); score: 0.946 MATCH C10HBa0115K16.1- SGN-E201553- 0.946 521 1.000 C PGS_C10HBa0115K16.1-_SGN-E201553- (131828 131308) Alignment (genomic DNA sequence = upper lines): TACCCAGCCT ATATCTATAC CTCCTTTTAG AATGGCACCT GCTGAGTTGA AAGAATTGAA 131769 |||||| ||| |||||||||| |||||| ||| |||||||||| |||||||||| |||||||||| TACCCAACCT ATATCTATAC CTCCTTATAG AATGGCACCT GCTGAGTTGA AAGAATTGAA 60 AGAGCAATTG AGGGATTTGC TAGAAAAGGG CTTCATCAGG CCTAGTACGT CACCTTGGGG 131709 |||||||||| |||||||| | |||||||||| |||||||||| |||||||||| |||||||||| AGAGCAATTG AGGGATTTAC TAGAAAAGGG CTTCATCAGG CCTAGTACGT CACCTTGGGG 120 AGCACCAGTA CTGTTTGTGA GGAAGAAGGA TGGGTCGCTG CGGATGTGCA TTGATTATAG 131649 |||||| ||| || ||||||| |||||||||| ||||||||| |||||||||| |||||||||| AGCACCGGTA CTATTTGTGA GGAAGAAGGA TGGGTCGCTC CGGATGTGCA TTGATTATAG 180 GCAGTTGAAC AAAGTAACAA TAAAGAACAG GTATCCCCTC CCAAGGATTG ACGATCTATT 131589 |||| ||||| |||||||||| ||| |||||| |||||||||| |||||||||| |||||||||| GCAGCTGAAC AAAGTAACAA TAATGAACAG GTATCCCCTC CCAAGGATTG ACGATCTATT 240 TGACCAGTTG CAGGGTGCAA AGTGTTTTTC AAAGATAGAC TTGCGGTCAG GTTATCATCA 131529 |||||||||| |||||||||| || ||||||| |||||||||| |||||||||| |||||||||| TGACCAGTTG CAGGGTGCAA AGGGTTTTTC AAAGATAGAC TTGCGGTCAG GTTATCATCA 300 GGTGCGGGTA AGGGAGGCAG ATATTCCAAA GACAGCATTC CGGACCCGAT ATGGGCATTA 131469 ||| ||||| |||||||||| |||| |||| ||| |||||| |||||||||| |||||||||| GGTACGGGTT AGGGAGGCAG ATATCCCAAT GACGGCATTC CGGACCCGAT ATGGGCATTA 360 TGAGTTTAGA GTGCTGTCTT TTGGGCTGAC TAATGCTCCA GCGGTATTCA TGGATTTAAT 131409 || ||||||| ||| |||||| |||||||||| || ||||||| |||||||||| |||||||||| TGTGTTTAGA GTGTTGTCTT TTGGGCTGAC TATTGCTCCA GCGGTATTCA TGGATTTAAT 420 GAATCGAGTA TTTAAACCAT TCCTTGATAT GTTTGTTATT GTATTTATAG ACGATATTCT 131349 |||| ||||| ||||| |||| |||||||||| |||||||||| | |||||||| | |||| | GAATTGAGTA TTTAATCCAT TCCTTGATAT GTTTGTTATT GGATTTATAG CCCCTATTAT 480 GGTCTATTCA CGTTCAGAAG AGGAGCATGC AGATCATTTA A 131308 |||||||||| ||||||||| ||||||||| ||| ||||| | GGTCTATTCA CGTTCAGAAA AGGAGCATGA AGACTATTTA A 521 hqPGS_C10HBa0115K16.1-_SGN-E201553- (131828 131308) ******************************************************************************** EST sequence 15 -strand 598 n (File: SGN-E350824-) 1 AGCATGTTAG ATTTTCTTCC CAGCCAGCAC AGAGTGCACC CCCACGTTTC ATGGGTAGGG 61 GGTTCGATCG TATGGGATAT TCAGAAGCTG GTCAGAGCTC TAGGGCGTTA GGGTCACAGA 121 TGGGCAGGAG TTTGAGCCAG TCGAGGCCAC CTTTGCCTCA GTGTTCTCAT TGTGGTAAGT 181 CCCATCCTGG GGAATGTCGT TGGGCTACAG GTGCGTGTTT TTCTTGCGGC CGTCAGGGCC 241 ATACTATGAG GGAGTGTCAC CTTAGAGGTA GTGCAGGTGG TATGGCACAG CCTACAGGGT 301 CCGTTGCTGG TTCATTTTCT TCTGTGGCTA TGCGCCCTAC GGGGCAGGGT ATTCAGGCGC 361 CAGCAGGCCA TGGTAGAGGA CGTGGTGGAG CTTCCAGTTC TAGCAGTGCC TCGAACCGTA 421 TATATGCTTT GACTAATAGG CAGGATCAGG GGGTGTCACC TAATGTGATC ACAGGTATAT 481 TATCACTATT CTCCCGAAGT GTGTATACAT TGATAGACCC AGGTTCCACC TTATCATATA 541 TATCTCCCTT TGTTGCTAGT AGGATCGGAA TAGAGTATGA GTTGATAGAA CCATTTGA Predicted gene structure (within gDNA segment 133489 to 131682): Exon 1 132879 132282 ( 598 n); cDNA 1 598 ( 598 n); score: 0.967 MATCH C10HBa0115K16.1- SGN-E350824- 0.967 598 1.000 C PGS_C10HBa0115K16.1-_SGN-E350824- (132879 132282) Alignment (genomic DNA sequence = upper lines): AGCATGTTAG ATTTTCTTCC CAGCCAGCAC AGAGTGCACC CCCACGTTTC ATGGGTAGGG 132820 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGCATGTTAG ATTTTCTTCC CAGCCAGCAC AGAGTGCACC CCCACGTTTC ATGGGTAGGG 60 GGTTCGATCG TATGGGATAT TCAGAACCTG GTCAGAGCTC TAGGGCGTCA GGGTCACAGA 132760 |||||||||| |||||||||| |||||| ||| |||||||||| |||||||| | |||||||||| GGTTCGATCG TATGGGATAT TCAGAAGCTG GTCAGAGCTC TAGGGCGTTA GGGTCACAGA 120 TGGGCAGGGG TTTGAGCCAG TCGAGGCCAC CTTTGCCTCG GTGTTCTCGT TGTGGTAAGT 132700 |||||||| | |||||||||| |||||||||| ||||||||| |||||||| | |||||||||| TGGGCAGGAG TTTGAGCCAG TCGAGGCCAC CTTTGCCTCA GTGTTCTCAT TGTGGTAAGT 180 CCCATCCTGG GGAATGTCGT TGGGCTACAG GTGCGTGTTT TTCTTGCGGA CGTCAGGGCC 132640 |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| |||||||||| CCCATCCTGG GGAATGTCGT TGGGCTACAG GTGCGTGTTT TTCTTGCGGC CGTCAGGGCC 240 ATACTATGAG GGAGTGTCAC CTTAGAGGTA GTGCAGGTGG TATGACACAG CCTACAGGGT 132580 |||||||||| |||||||||| |||||||||| |||||||||| |||| ||||| |||||||||| ATACTATGAG GGAGTGTCAC CTTAGAGGTA GTGCAGGTGG TATGGCACAG CCTACAGGGT 300 CCATTGCTGG TTCATCTTCT TCTGTGGCTA TGCGCCCTAC GGGGCAGGGT ATTCAGGCAC 132520 || ||||||| ||||| |||| |||||||||| |||||||||| |||||||||| |||||||| | CCGTTGCTGG TTCATTTTCT TCTGTGGCTA TGCGCCCTAC GGGGCAGGGT ATTCAGGCGC 360 CAGCAGGCCG TGGTAGAGGA CGTGGTGGAG CTTCCAGTTC TAGCGGTCCC TCAAACCGTA 132460 ||||||||| |||||||||| |||||||||| |||||||||| |||| || || || ||||||| CAGCAGGCCA TGGTAGAGGA CGTGGTGGAG CTTCCAGTTC TAGCAGTGCC TCGAACCGTA 420 TATATGCTTT GACTAATAGG CAAGATCAAG AGGCGTCACC TAATGTGATC ACAGGTATAT 132400 |||||||||| |||||||||| || ||||| | || |||||| |||||||||| |||||||||| TATATGCTTT GACTAATAGG CAGGATCAGG GGGTGTCACC TAATGTGATC ACAGGTATAT 480 TATCACTATT CTCCCGAAGT GTGTATGCAT TGATAGACCC AGGTTCCACC TTATCATATA 132340 |||||||||| |||||||||| |||||| ||| |||||||||| |||||||||| |||||||||| TATCACTATT CTCCCGAAGT GTGTATACAT TGATAGACCC AGGTTCCACC TTATCATATA 540 TATCTCCCTT TGTTGCTAGT AGGATCGGAA TAGAGTCTGA GTTGATAGAA CCATTTGA 132282 |||||||||| |||||||||| |||||||||| |||||| ||| |||||||||| |||||||| TATCTCCCTT TGTTGCTAGT AGGATCGGAA TAGAGTATGA GTTGATAGAA CCATTTGA 598 hqPGS_C10HBa0115K16.1-_SGN-E350824- (132879 132282) ******************************************************************************** EST sequence 137 +strand 196 n (File: SGN-E379248+) 1 CATCGTTATG TGATGGGATT GGATGGTTAT CTGATTGACA TTCCTATGGC AGTGACTCTT 61 CATCCAGGTA TGGACATTGC TCGGGTGCAG GCATATGCAC AGGGGGTAGA GGATCGGCAC 121 CGGGGACGTT AGCCAGATAG AGATTATAAT AGAGGGCCCC ATAAGAGGGC TAGATCACCA 181 GGTTATCTTG ACGAGT Predicted gene structure (within gDNA segment 134093 to 131923): Exon 1 133097 132902 ( 196 n); cDNA 1 196 ( 196 n); score: 0.939 MATCH C10HBa0115K16.1- SGN-E379248+ 0.939 196 1.000 C PGS_C10HBa0115K16.1-_SGN-E379248+ (133097 132902) Alignment (genomic DNA sequence = upper lines): CATCGTTATG TGATGGGATT GGATCGTTAT CTGATTGACG GTTGTATGGC AGTGACTCTT 133038 |||||||||| |||||||||| |||| ||||| ||||||||| | |||||| |||||||||| CATCGTTATG TGATGGGATT GGATGGTTAT CTGATTGACA TTCCTATGGC AGTGACTCTT 60 CAGCCAGGTA TGGACATTGC TCGGGTGCAG GCATATGCAC AGGGGGTAGA GGATCGGCAC 132978 || ||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CATCCAGGTA TGGACATTGC TCGGGTGCAG GCATATGCAC AGGGGGTAGA GGATCGGCAC 120 CGGGGACGTC AGCCAGATAG AGATTATAAT AGAGGCCAGC ATAAGAGGGC TAGATCAGCA 132918 ||||||||| |||||||||| |||||||||| ||||| | | |||||||||| ||||||| || CGGGGACGTT AGCCAGATAG AGATTATAAT AGAGGGCCCC ATAAGAGGGC TAGATCACCA 180 GGTTATCCTG ACGAGT 132902 ||||||| || |||||| GGTTATCTTG ACGAGT 196 hqPGS_C10HBa0115K16.1-_SGN-E379248+ (133097 132902) ******************************************************************************** EST sequence 62 -strand 586 n (File: SGN-E543103-) 1 GGCAGCCATG GAAATGGAGA AAATCAACCA TGCAACTCTT GACCAGCAGC TGCAAAGAAT 61 TTGGTTTGAT TAATAGCTTG AGCAGTAAAT ATTGGACGTG CGGCTCGACT ATACGGTGTA 121 GACGCTCAGT TCGGTGATCC TCCCGCCTAG GATATCTACT TTGCTGAGTG GGAGAGCTCC 181 ACTGTTTCGT AGCCCAGTCA TTTTGGTACA TAACTTTTTG TGTAGTCTTT TGCTTGTCTA 241 TGGGTATGGT GGGGCCCTGT CCCGTCGAGT TTCACTACTA TACTCTTAGA GGTCCATAGA 301 CATCGCGTGG GTTGTATATA TATGTTTTGG ATAATGGTCT GGACATGGTT TGTTTGGGAT 361 GTCCACTTGT ACAAGGGCAG CCTTGTCAGC TGCGTACATC TTTGTGTATT GTGTAGTGGC 421 AGCCTTGTCG GCTGCGTATG CTATTATGCT TTGGATAGTG GCGGCCTTGT CGGCTCGCGT 481 ATGTTGTTAC GGTTGAATGG TTATGACTCC TTATGAGACA GATCCACTTT ATATATATAT 541 ATATGGCGTT GGGGTTGGCG TGATTGATAA AAAAAAGGGG GGCCCG Predicted gene structure (within gDNA segment 136619 to 133172): Exon 1 135961 135893 ( 69 n); cDNA 1 68 ( 68 n); score: 0.862 Intron 1 135892 135339 ( 554 n); Pd: 0.900 (s: 0.86), Pa: 0.868 (s: 0.98) Exon 2 135338 135292 ( 47 n); cDNA 69 115 ( 47 n); score: 0.979 Intron 2 135291 134568 ( 724 n); Pd: 0.991 (s: 0.98), Pa: 0.000 (s: 0.96) Exon 3 134567 134235 ( 333 n); cDNA 116 448 ( 333 n); score: 0.899 Intron 3 134234 134115 ( 120 n); Pd: 0.086 (s: 0.82), Pa: 0.922 (s: 0) Exon 4 134114 134107 ( 8 n); cDNA 449 456 ( 8 n); score: 0.750 MATCH C10HBa0115K16.1- SGN-E543103- 0.893 457 0.780 C PGS_C10HBa0115K16.1-_SGN-E543103- (135961 135893,135338 135292,134567 134235,134114 134107) Alignment (genomic DNA sequence = upper lines): GGCAGCCATG GAAATGGAG- AAACCAACCC TGCAACTCTT GGCCAGCAGC TGCAAATAAT 135903 |||||||||| ||||||||| ||| ||||| |||||||||| | |||||||| |||||| ||| GGCAGCCATG GAAATGGAGA AAATCAACCA TGCAACTCTT GACCAGCAGC TGCAAAGAAT 60 TTGGTTAGTA ATCTCCTTGT TTGGTGTGTT AATTCTTTAG AATACCCTTG TTAATTATCC 135843 |||||| | TTGGTT--TG .......... .......... .......... .......... .......... 68 ATTAATTTTA AGAAGGGGGC GTGACCAGTA GCTTAGGAAG TTTGTTTTAG TTATTGAATG 135783 .......... .......... .......... .......... .......... .......... 68 TACTAAGTAT GAATGGAAAC CATAATCGGA TTATTAGTGG TGTCGTGTTG GTGCTTGGGC 135723 .......... .......... .......... .......... .......... .......... 68 TGTTTTGACT AAAGCAAACT GCAGGAAAAT TCTGTTTTGG CATTATGTAT ATGTTGAATG 135663 .......... .......... .......... .......... .......... .......... 68 TGATTATGAG TATATACTCC AAAGGATGAA TACGATAAGG TAGATGTGTT ACGAATTATA 135603 .......... .......... .......... .......... .......... .......... 68 AAACGAGTTA TCACTCGGTG TGTCGTTGCT TCGCTGATAT AGTTGCCGAG ATGGAACTGT 135543 .......... .......... .......... .......... .......... .......... 68 TTTGGGGAGG GGGCTGTTTA ATATGATTCT TTGGGTTATA TGTGTTATTG GTATTGTTGT 135483 .......... .......... .......... .......... .......... .......... 68 GGATAATTTG GATTGTTGTC GGATTGGGAC GAAGTAAGGA AAATAGGGGA GGTGCTGCCG 135423 .......... .......... .......... .......... .......... .......... 68 AATTTTCGTT AGATTATTAG CTAGCTTACA AGAAAGTAAA GCACGATGTT TATCTAATTG 135363 .......... .......... .......... .......... .......... .......... 68 CGGCACGATT GTTGCTTGTT ATAGATTAAT AGCTTGAGCA GTAAATATTG GACGTGCGGC 135303 |||||| |||||||||| |||||||||| |||||||||| .......... .......... ....ATTAAT AGCTTGAGCA GTAAATATTG GACGTGCGGC 104 TCGATTATAC GGTATGTAAC GCTGTCCCTT CTTTCTTTGC TTGGCATGAC TTTTAAAAAT 135243 |||| ||||| | TCGACTATAC G......... .......... .......... .......... .......... 115 AAGCGAATAA CGGACAGATT TGATACTTAC CTCTAAAGCG TCTAGGTGAT GTATATTCTT 135183 .......... .......... .......... .......... .......... .......... 115 GCTTCCACAA TTATTCCTCT ATATATCGGT TATGTCTAAG GCTATGATGA TCTCTAATAT 135123 .......... .......... .......... .......... .......... .......... 115 CTATGGTAAT GCTTCTTAGA GTCATTGAAA TTTTACGTTT TCATATCGTA TTAAAGGTTC 135063 .......... .......... .......... .......... .......... .......... 115 ATAATCTTGA TAAAATATTA ATCTTTGGTA ATACTCTTTG CTGGTTCACG TTGATTGTTC 135003 .......... .......... .......... .......... .......... .......... 115 TATTGAGTTA TAAGAAATGA TTTTAATTGC ATATGGTTGC TCACAATATT CTGCTCGTGC 134943 .......... .......... .......... .......... .......... .......... 115 ATAGAGTCAT TTATCATTTC ACCGAGTCCC GGGCCGGGTA ATGTTCGTGC GGAGTTTCTT 134883 .......... .......... .......... .......... .......... .......... 115 GCATATGTCA CCGAGTTCCT CACTAGAGGG CCGGGTATGT ATATTATATA TATGATTGGT 134823 .......... .......... .......... .......... .......... .......... 115 GATGAGGATG GTTATGATGA TGATGATGAC GGAGATGACG TGATGATTAT TTTGCCGAGC 134763 .......... .......... .......... .......... .......... .......... 115 CCCTTACTAG GGAAGCTGGG CACCTTAAAT GTTAAATATA TGCATGATTT TCACTTAAAA 134703 .......... .......... .......... .......... .......... .......... 115 AGTATATGTG TAGCGATATT TTGTTTCGAG TTGCCACATT GGTATCCTGT CATCTTTACC 134643 .......... .......... .......... .......... .......... .......... 115 TTATGCTTTA CATACTCAGT ACATTGTCCG TACTGACCCC CCCTTTCCTC GGGGGGCTGC 134583 .......... .......... .......... .......... .......... .......... 115 GTTTCATGCC CGCAGGTGTA GACGCGCAGT TCGGTGATCC TCCCGCCTAG GATATCTACT 134523 ||||| ||||| |||| |||||||||| |||||||||| |||||||||| .......... .....GTGTA GACGCTCAGT TCGGTGATCC TCCCGCCTAG GATATCTACT 160 CTGCTGATTG GGAGAGCTCC ACTGTTCCGG AGCCCATTCG TTTTGGTACA TAAC-TTTTG 134464 |||||| || |||||||||| |||||| || |||||| || |||||||||| |||| ||||| TTGCTGAGTG GGAGAGCTCC ACTGTTTCGT AGCCCAGTCA TTTTGGTACA TAACTTTTTG 220 TGTAGTCTTT TGCTCGTCTA TGGGTATGGC GGGGCCCTGT CCCGTCGAGT TTCACTAATG 134404 |||||||||| |||| ||||| ||||||||| |||||||||| |||||||||| ||||||| | TGTAGTCTTT TGCTTGTCTA TGGGTATGGT GGGGCCCTGT CCCGTCGAGT TTCACTACTA 280 TACCCTTAGA GGTCTGTGGA CATTATGTGG GTTGTATATA TATGTTTTGG ATAATGGTCT 134344 ||| |||||| |||| | || ||| |||| |||||||||| |||||||||| |||||||||| TACTCTTAGA GGTCCATAGA CATCGCGTGG GTTGTATATA TATGTTTTGG ATAATGGTCT 340 GGACATGGTT TGTTTGGGAT GTCCGCTTGT ACAGGGGCAG CCTTGTCGGC TGTGTACATC 134284 |||||||||| |||||||||| |||| ||||| ||| |||||| ||||||| || || ||||||| GGACATGGTT TGTTTGGGAT GTCCACTTGT ACAAGGGCAG CCTTGTCAGC TGCGTACATC 400 ATTATGCTTT GAATAGTGGC GGCCTTGTCG GCTCGCGTAT GCTGTTATGG TTGAATGGTT 134224 || || || | ||||||| ||||||||| ||| |||||| ||| ||||| TTTGTGTATT GTGTAGTGGC AGCCTTGTCG GCT-GCGTAT GCTATTATG. .......... 448 ATGACTCCTT ATGAGACAGG TCCTCTTATA TATATATATA TGACGTTGGG GTTGGCTTGA 134164 .......... .......... .......... .......... .......... .......... 448 TTTGATTAAA TTCCATATTG TCTTAGTTTC AGTTGGTCAT ACTTAGCAGG TTTGTAT 134107 |||| || .......... .......... .......... .......... .........C TTTGGAT 456 hqPGS_C10HBa0115K16.1-_SGN-E543103- (135961 135893,135338 135292,134567 134235,134114 134107) ******************************************************************************** EST sequence 228 +strand 577 n (File: SGN-E543104+) 1 GGCAGCCATG GAAATGGAGA AAATCAACCA TGCAACTCTT GACCAGCAGC TGCAAAGAAT 61 TTGGTTTGAT TAATAGCTTG AGCAGTAAAT ATTGGACGTG CGGCTCGACT ATACGGTGTA 121 GACGCTCAGT TCGGTGATCC TCCCGCCTAG GATATCTACT TTGCTGAGTG GGAGAGCTCC 181 ACTGTTTCGT AGCCCAGTCA TTTTGGTACA TAACTTTTTG TGTAGTCTTT TGCTTGTCTA 241 TGGGTATGGT GGGGCCCTGT CCCGTCGAGT TTCACTACTA TACTCTTAGA GGTCCATAGA 301 CATCGCGTGG GTTGTATATA TATGTTTTGG ATAATGGTCT GGACATGGTT TGTTTGGGAT 361 GTCCACTTGT ACAAGGGCAG CCTTGTCAGC TGCGTACATC TTTGTGTATT GTGTAGTGGC 421 AGCCTTGTCG GCTGCGTATG CTATTATGCT TTGGATAGTG GCGGCCTTGT CGGCTCGCGT 481 ATGTTGTTAC GGTTGAATGG TTATGACTCC TTATGAGACA GATCCACTTT ATATATATAT 541 ATATGGCGAT GGGGTTGGCT TGATTTGATT AAAAAAA Predicted gene structure (within gDNA segment 136609 to 133252): Exon 1 135961 135893 ( 69 n); cDNA 1 68 ( 68 n); score: 0.862 Intron 1 135892 135339 ( 554 n); Pd: 0.900 (s: 0.86), Pa: 0.868 (s: 0.98) Exon 2 135338 135292 ( 47 n); cDNA 69 115 ( 47 n); score: 0.979 Intron 2 135291 134568 ( 724 n); Pd: 0.991 (s: 0.98), Pa: 0.000 (s: 0.96) Exon 3 134567 134235 ( 333 n); cDNA 116 448 ( 333 n); score: 0.899 Intron 3 134234 134115 ( 120 n); Pd: 0.086 (s: 0.82), Pa: 0.922 (s: 0) Exon 4 134114 134107 ( 8 n); cDNA 449 456 ( 8 n); score: 0.750 MATCH C10HBa0115K16.1- SGN-E543104+ 0.893 457 0.792 C PGS_C10HBa0115K16.1-_SGN-E543104+ (135961 135893,135338 135292,134567 134235,134114 134107) Alignment (genomic DNA sequence = upper lines): GGCAGCCATG GAAATGGAG- AAACCAACCC TGCAACTCTT GGCCAGCAGC TGCAAATAAT 135903 |||||||||| ||||||||| ||| ||||| |||||||||| | |||||||| |||||| ||| GGCAGCCATG GAAATGGAGA AAATCAACCA TGCAACTCTT GACCAGCAGC TGCAAAGAAT 60 TTGGTTAGTA ATCTCCTTGT TTGGTGTGTT AATTCTTTAG AATACCCTTG TTAATTATCC 135843 |||||| | TTGGTT--TG .......... .......... .......... .......... .......... 68 ATTAATTTTA AGAAGGGGGC GTGACCAGTA GCTTAGGAAG TTTGTTTTAG TTATTGAATG 135783 .......... .......... .......... .......... .......... .......... 68 TACTAAGTAT GAATGGAAAC CATAATCGGA TTATTAGTGG TGTCGTGTTG GTGCTTGGGC 135723 .......... .......... .......... .......... .......... .......... 68 TGTTTTGACT AAAGCAAACT GCAGGAAAAT TCTGTTTTGG CATTATGTAT ATGTTGAATG 135663 .......... .......... .......... .......... .......... .......... 68 TGATTATGAG TATATACTCC AAAGGATGAA TACGATAAGG TAGATGTGTT ACGAATTATA 135603 .......... .......... .......... .......... .......... .......... 68 AAACGAGTTA TCACTCGGTG TGTCGTTGCT TCGCTGATAT AGTTGCCGAG ATGGAACTGT 135543 .......... .......... .......... .......... .......... .......... 68 TTTGGGGAGG GGGCTGTTTA ATATGATTCT TTGGGTTATA TGTGTTATTG GTATTGTTGT 135483 .......... .......... .......... .......... .......... .......... 68 GGATAATTTG GATTGTTGTC GGATTGGGAC GAAGTAAGGA AAATAGGGGA GGTGCTGCCG 135423 .......... .......... .......... .......... .......... .......... 68 AATTTTCGTT AGATTATTAG CTAGCTTACA AGAAAGTAAA GCACGATGTT TATCTAATTG 135363 .......... .......... .......... .......... .......... .......... 68 CGGCACGATT GTTGCTTGTT ATAGATTAAT AGCTTGAGCA GTAAATATTG GACGTGCGGC 135303 |||||| |||||||||| |||||||||| |||||||||| .......... .......... ....ATTAAT AGCTTGAGCA GTAAATATTG GACGTGCGGC 104 TCGATTATAC GGTATGTAAC GCTGTCCCTT CTTTCTTTGC TTGGCATGAC TTTTAAAAAT 135243 |||| ||||| | TCGACTATAC G......... .......... .......... .......... .......... 115 AAGCGAATAA CGGACAGATT TGATACTTAC CTCTAAAGCG TCTAGGTGAT GTATATTCTT 135183 .......... .......... .......... .......... .......... .......... 115 GCTTCCACAA TTATTCCTCT ATATATCGGT TATGTCTAAG GCTATGATGA TCTCTAATAT 135123 .......... .......... .......... .......... .......... .......... 115 CTATGGTAAT GCTTCTTAGA GTCATTGAAA TTTTACGTTT TCATATCGTA TTAAAGGTTC 135063 .......... .......... .......... .......... .......... .......... 115 ATAATCTTGA TAAAATATTA ATCTTTGGTA ATACTCTTTG CTGGTTCACG TTGATTGTTC 135003 .......... .......... .......... .......... .......... .......... 115 TATTGAGTTA TAAGAAATGA TTTTAATTGC ATATGGTTGC TCACAATATT CTGCTCGTGC 134943 .......... .......... .......... .......... .......... .......... 115 ATAGAGTCAT TTATCATTTC ACCGAGTCCC GGGCCGGGTA ATGTTCGTGC GGAGTTTCTT 134883 .......... .......... .......... .......... .......... .......... 115 GCATATGTCA CCGAGTTCCT CACTAGAGGG CCGGGTATGT ATATTATATA TATGATTGGT 134823 .......... .......... .......... .......... .......... .......... 115 GATGAGGATG GTTATGATGA TGATGATGAC GGAGATGACG TGATGATTAT TTTGCCGAGC 134763 .......... .......... .......... .......... .......... .......... 115 CCCTTACTAG GGAAGCTGGG CACCTTAAAT GTTAAATATA TGCATGATTT TCACTTAAAA 134703 .......... .......... .......... .......... .......... .......... 115 AGTATATGTG TAGCGATATT TTGTTTCGAG TTGCCACATT GGTATCCTGT CATCTTTACC 134643 .......... .......... .......... .......... .......... .......... 115 TTATGCTTTA CATACTCAGT ACATTGTCCG TACTGACCCC CCCTTTCCTC GGGGGGCTGC 134583 .......... .......... .......... .......... .......... .......... 115 GTTTCATGCC CGCAGGTGTA GACGCGCAGT TCGGTGATCC TCCCGCCTAG GATATCTACT 134523 ||||| ||||| |||| |||||||||| |||||||||| |||||||||| .......... .....GTGTA GACGCTCAGT TCGGTGATCC TCCCGCCTAG GATATCTACT 160 CTGCTGATTG GGAGAGCTCC ACTGTTCCGG AGCCCATTCG TTTTGGTACA TAAC-TTTTG 134464 |||||| || |||||||||| |||||| || |||||| || |||||||||| |||| ||||| TTGCTGAGTG GGAGAGCTCC ACTGTTTCGT AGCCCAGTCA TTTTGGTACA TAACTTTTTG 220 TGTAGTCTTT TGCTCGTCTA TGGGTATGGC GGGGCCCTGT CCCGTCGAGT TTCACTAATG 134404 |||||||||| |||| ||||| ||||||||| |||||||||| |||||||||| ||||||| | TGTAGTCTTT TGCTTGTCTA TGGGTATGGT GGGGCCCTGT CCCGTCGAGT TTCACTACTA 280 TACCCTTAGA GGTCTGTGGA CATTATGTGG GTTGTATATA TATGTTTTGG ATAATGGTCT 134344 ||| |||||| |||| | || ||| |||| |||||||||| |||||||||| |||||||||| TACTCTTAGA GGTCCATAGA CATCGCGTGG GTTGTATATA TATGTTTTGG ATAATGGTCT 340 GGACATGGTT TGTTTGGGAT GTCCGCTTGT ACAGGGGCAG CCTTGTCGGC TGTGTACATC 134284 |||||||||| |||||||||| |||| ||||| ||| |||||| ||||||| || || ||||||| GGACATGGTT TGTTTGGGAT GTCCACTTGT ACAAGGGCAG CCTTGTCAGC TGCGTACATC 400 ATTATGCTTT GAATAGTGGC GGCCTTGTCG GCTCGCGTAT GCTGTTATGG TTGAATGGTT 134224 || || || | ||||||| ||||||||| ||| |||||| ||| ||||| TTTGTGTATT GTGTAGTGGC AGCCTTGTCG GCT-GCGTAT GCTATTATG. .......... 448 ATGACTCCTT ATGAGACAGG TCCTCTTATA TATATATATA TGACGTTGGG GTTGGCTTGA 134164 .......... .......... .......... .......... .......... .......... 448 TTTGATTAAA TTCCATATTG TCTTAGTTTC AGTTGGTCAT ACTTAGCAGG TTTGTAT 134107 |||| || .......... .......... .......... .......... .........C TTTGGAT 456 hqPGS_C10HBa0115K16.1-_SGN-E543104+ (135961 135893,135338 135292,134567 134235,134114 134107) ******************************************************************************** EST sequence 34 -strand 542 n (File: SGN-E374134-) 1 CAGCCATGGA AATGGAGAAA ACCAGCCATT AAACTCTTGG ACAGCAGCTG CAAAGAAATT 61 GATTTATACC TTGAGCAGTA AATATTGGAC GTACGGCTCG ACTATTCGGT GTAGACGCTC 121 AGTTCGGTGA TCCTCCCGCC TAGGATATCT ACTCTGCTTT TTGGGAGAGC TCCACTGTTC 181 CGGAGCCCAG TCGTTTTGGT ACATAACTTC TTATGTAGTC TTTTGCTTGT CTATGGGTAT 241 GGCGGGGCCC TGTCCCGTCA AGTTTCACTA CTATACTCTT AGAGGTCTGT AGACATCGTG 301 TGGGTTGTAT AATTATGTTT TGGATAATGG TCTGGACATG GTTTGTTTGG GATGTCCATT 361 TGTACAAGTG CAGCCTTGTC GGTTGTGAAC ATCATTGTGT ATTGTGTAGT GGCAGCCTCG 421 TCGGCTGCGT ATGCTATTAT GTTTTGGATA GTGGCGGCCT TGTCGGCTCG CATATGTTGT 481 TACGATTTAA TGGTTATGAC TCTTTATGAG ATAGATCCAC TTTATATATA AAAAAAAAAA 541 AA Predicted gene structure (within gDNA segment 136356 to 131870): Exon 1 135959 135900 ( 60 n); cDNA 1 61 ( 61 n); score: 0.842 Intron 1 135899 135339 ( 561 n); Pd: 0.997 (s: 0.81), Pa: 0.868 (s: 0.89) Exon 2 135338 135292 ( 47 n); cDNA 62 108 ( 47 n); score: 0.894 Intron 2 135291 134568 ( 724 n); Pd: 0.991 (s: 0.89), Pa: 0.000 (s: 0.98) Exon 3 134567 134235 ( 333 n); cDNA 109 441 ( 333 n); score: 0.902 Intron 3 134234 134115 ( 120 n); Pd: 0.086 (s: 0.82), Pa: 0.922 (s: 0) Exon 4 134114 134107 ( 8 n); cDNA 442 449 ( 8 n); score: 0.750 PPA cDNA 528 542 MATCH C10HBa0115K16.1- SGN-E374134- 0.893 448 0.827 C PGS_C10HBa0115K16.1-_SGN-E374134- (135959 135900,135338 135292,134567 134235,134114 134107) Alignment (genomic DNA sequence = upper lines): CAGCCATGGA AATGGAG-AA ACCAACCCTG CAACTCTTGG CCAGCAGCTG CAAATAATTT 135901 |||||||||| ||||||| || |||| || | ||||||||| ||||||||| |||| || || CAGCCATGGA AATGGAGAAA ACCAGCCATT AAACTCTTGG ACAGCAGCTG CAAAGAAATT 60 GGTTAGTAAT CTCCTTGTTT GGTGTGTTAA TTCTTTAGAA TACCCTTGTT AATTATCCAT 135841 | G......... .......... .......... .......... .......... .......... 61 TAATTTTAAG AAGGGGGCGT GACCAGTAGC TTAGGAAGTT TGTTTTAGTT ATTGAATGTA 135781 .......... .......... .......... .......... .......... .......... 61 CTAAGTATGA ATGGAAACCA TAATCGGATT ATTAGTGGTG TCGTGTTGGT GCTTGGGCTG 135721 .......... .......... .......... .......... .......... .......... 61 TTTTGACTAA AGCAAACTGC AGGAAAATTC TGTTTTGGCA TTATGTATAT GTTGAATGTG 135661 .......... .......... .......... .......... .......... .......... 61 ATTATGAGTA TATACTCCAA AGGATGAATA CGATAAGGTA GATGTGTTAC GAATTATAAA 135601 .......... .......... .......... .......... .......... .......... 61 ACGAGTTATC ACTCGGTGTG TCGTTGCTTC GCTGATATAG TTGCCGAGAT GGAACTGTTT 135541 .......... .......... .......... .......... .......... .......... 61 TGGGGAGGGG GCTGTTTAAT ATGATTCTTT GGGTTATATG TGTTATTGGT ATTGTTGTGG 135481 .......... .......... .......... .......... .......... .......... 61 ATAATTTGGA TTGTTGTCGG ATTGGGACGA AGTAAGGAAA ATAGGGGAGG TGCTGCCGAA 135421 .......... .......... .......... .......... .......... .......... 61 TTTTCGTTAG ATTATTAGCT AGCTTACAAG AAAGTAAAGC ACGATGTTTA TCTAATTGCG 135361 .......... .......... .......... .......... .......... .......... 61 GCACGATTGT TGCTTGTTAT AGATTAATAG CTTGAGCAGT AAATATTGGA CGTGCGGCTC 135301 ||| ||| |||||||||| |||||||||| ||| |||||| .......... .......... ..ATTTATAC CTTGAGCAGT AAATATTGGA CGTACGGCTC 99 GATTATACGG TATGTAACGC TGTCCCTTCT TTCTTTGCTT GGCATGACTT TTAAAAATAA 135241 || ||| || GACTATTCG. .......... .......... .......... .......... .......... 108 GCGAATAACG GACAGATTTG ATACTTACCT CTAAAGCGTC TAGGTGATGT ATATTCTTGC 135181 .......... .......... .......... .......... .......... .......... 108 TTCCACAATT ATTCCTCTAT ATATCGGTTA TGTCTAAGGC TATGATGATC TCTAATATCT 135121 .......... .......... .......... .......... .......... .......... 108 ATGGTAATGC TTCTTAGAGT CATTGAAATT TTACGTTTTC ATATCGTATT AAAGGTTCAT 135061 .......... .......... .......... .......... .......... .......... 108 AATCTTGATA AAATATTAAT CTTTGGTAAT ACTCTTTGCT GGTTCACGTT GATTGTTCTA 135001 .......... .......... .......... .......... .......... .......... 108 TTGAGTTATA AGAAATGATT TTAATTGCAT ATGGTTGCTC ACAATATTCT GCTCGTGCAT 134941 .......... .......... .......... .......... .......... .......... 108 AGAGTCATTT ATCATTTCAC CGAGTCCCGG GCCGGGTAAT GTTCGTGCGG AGTTTCTTGC 134881 .......... .......... .......... .......... .......... .......... 108 ATATGTCACC GAGTTCCTCA CTAGAGGGCC GGGTATGTAT ATTATATATA TGATTGGTGA 134821 .......... .......... .......... .......... .......... .......... 108 TGAGGATGGT TATGATGATG ATGATGACGG AGATGACGTG ATGATTATTT TGCCGAGCCC 134761 .......... .......... .......... .......... .......... .......... 108 CTTACTAGGG AAGCTGGGCA CCTTAAATGT TAAATATATG CATGATTTTC ACTTAAAAAG 134701 .......... .......... .......... .......... .......... .......... 108 TATATGTGTA GCGATATTTT GTTTCGAGTT GCCACATTGG TATCCTGTCA TCTTTACCTT 134641 .......... .......... .......... .......... .......... .......... 108 ATGCTTTACA TACTCAGTAC ATTGTCCGTA CTGACCCCCC CTTTCCTCGG GGGGCTGCGT 134581 .......... .......... .......... .......... .......... .......... 108 TTCATGCCCG CAGGTGTAGA CGCGCAGTTC GGTGATCCTC CCGCCTAGGA TATCTACTCT 134521 ||||||| ||| |||||| |||||||||| |||||||||| |||||||||| .......... ...GTGTAGA CGCTCAGTTC GGTGATCCTC CCGCCTAGGA TATCTACTCT 155 GCTGATTGGG AGAGCTCCAC TGTTCCGGAG CCCATTCGTT TTGGTACATA ACTT-TTGTG 134462 ||| ||||| |||||||||| |||||||||| |||| ||||| |||||||||| |||| || || GCTTTTTGGG AGAGCTCCAC TGTTCCGGAG CCCAGTCGTT TTGGTACATA ACTTCTTATG 215 TAGTCTTTTG CTCGTCTATG GGTATGGCGG GGCCCTGTCC CGTCGAGTTT CACTAATGTA 134402 |||||||||| || ||||||| |||||||||| |||||||||| |||| ||||| ||||| | || TAGTCTTTTG CTTGTCTATG GGTATGGCGG GGCCCTGTCC CGTCAAGTTT CACTACTATA 275 CCCTTAGAGG TCTGTGGACA TTATGTGGGT TGTATATATA TGTTTTGGAT AATGGTCTGG 134342 | |||||||| ||||| |||| | ||||||| |||||| || |||||||||| |||||||||| CTCTTAGAGG TCTGTAGACA TCGTGTGGGT TGTATAATTA TGTTTTGGAT AATGGTCTGG 335 ACATGGTTTG TTTGGGATGT CCGCTTGTAC AGGGGCAGCC TTGTCGGCTG TGTACATCAT 134282 |||||||||| |||||||||| || |||||| | | |||||| ||||||| || || ||||||| ACATGGTTTG TTTGGGATGT CCATTTGTAC AAGTGCAGCC TTGTCGGTTG TGAACATCAT 395 TATGCTTTGA ATAGTGGCGG CCTTGTCGGC TCGCGTATGC TGTTATGGTT GAATGGTTAT 134222 | || ||| ||||||| | ||| |||||| | |||||||| | ||||| TGTGTATTGT GTAGTGGCAG CCTCGTCGGC T-GCGTATGC TATTATG... .......... 441 GACTCCTTAT GAGACAGGTC CTCTTATATA TATATATATG ACGTTGGGGT TGGCTTGATT 134162 .......... .......... .......... .......... .......... .......... 441 TGATTAAATT CCATATTGTC TTAGTTTCAG TTGGTCATAC TTAGCAGGTT TGTAT 134107 || || || .......... .......... .......... .......... .......TTT TGGAT 449 hqPGS_C10HBa0115K16.1-_SGN-E374134- (135959 135900,135338 135292,134567 134235,134114 134107) ******************************************************************************** EST sequence 149 +strand 547 n (File: SGN-E305738+) 1 AGCCATGGAA ATGGAGAAAA CCAGCCATTA AACTCTTGGA CAGCAGCTGC AAAGAAATTG 61 ATTTATACCT TGAGCAGTAA ATATTGGACG TACGGCTCGA CTATTCGGTG TAGACGCTCA 121 GTTCGGTGAT CCTCCCGCCT AGGATATCTA CTCTGCTTTT TGGGAGAGCT CCACTGTTCC 181 GGAGCCCAGT CGTTTTGGTA CATAACTTCT TATGTAGTCT TTTGCTTGTC TATGGGTATG 241 GCGGGGCCCT GTCCCGTCAA GTTTCACTAC TATACTCTTA GAGGTCTGTA GACATCGTGT 301 GGGTTGTATA ATTATGTTTT GGATAATGGT CTGGACATGG TTTGTTTGGG ATGTCCATTT 361 GTACAAGTGC AGCCTTGTCG GTTGTGAACA TCATTGTGTA TTGTGTAGTG GCAGCCTCGT 421 CGGCTGCGTA TGCTATTATG TTTTGGATAG TGGCGGCCTT GTCGGCTCGC ATATGTTGTT 481 ACGATTTAAT GGTTATGACT CTTTATGAGA TAGATCCACT TTATATATGA AATGAATGGA 541 CTAACTA Predicted gene structure (within gDNA segment 136336 to 131800): Exon 1 135958 135900 ( 59 n); cDNA 1 60 ( 60 n); score: 0.839 Intron 1 135899 135339 ( 561 n); Pd: 0.997 (s: 0.81), Pa: 0.868 (s: 0.89) Exon 2 135338 135292 ( 47 n); cDNA 61 107 ( 47 n); score: 0.894 Intron 2 135291 134568 ( 724 n); Pd: 0.991 (s: 0.89), Pa: 0.000 (s: 0.98) Exon 3 134567 134235 ( 333 n); cDNA 108 440 ( 333 n); score: 0.902 Intron 3 134234 134115 ( 120 n); Pd: 0.086 (s: 0.82), Pa: 0.922 (s: 0) Exon 4 134114 134107 ( 8 n); cDNA 441 448 ( 8 n); score: 0.750 MATCH C10HBa0115K16.1- SGN-E305738+ 0.893 447 0.817 C PGS_C10HBa0115K16.1-_SGN-E305738+ (135958 135900,135338 135292,134567 134235,134114 134107) Alignment (genomic DNA sequence = upper lines): AGCCATGGAA ATGGAGA-AA CCAACCCTGC AACTCTTGGC CAGCAGCTGC AAATAATTTG 135900 |||||||||| ||||||| || ||| || | ||||||||| |||||||||| ||| || ||| AGCCATGGAA ATGGAGAAAA CCAGCCATTA AACTCTTGGA CAGCAGCTGC AAAGAAATTG 60 GTTAGTAATC TCCTTGTTTG GTGTGTTAAT TCTTTAGAAT ACCCTTGTTA ATTATCCATT 135840 .......... .......... .......... .......... .......... .......... 60 AATTTTAAGA AGGGGGCGTG ACCAGTAGCT TAGGAAGTTT GTTTTAGTTA TTGAATGTAC 135780 .......... .......... .......... .......... .......... .......... 60 TAAGTATGAA TGGAAACCAT AATCGGATTA TTAGTGGTGT CGTGTTGGTG CTTGGGCTGT 135720 .......... .......... .......... .......... .......... .......... 60 TTTGACTAAA GCAAACTGCA GGAAAATTCT GTTTTGGCAT TATGTATATG TTGAATGTGA 135660 .......... .......... .......... .......... .......... .......... 60 TTATGAGTAT ATACTCCAAA GGATGAATAC GATAAGGTAG ATGTGTTACG AATTATAAAA 135600 .......... .......... .......... .......... .......... .......... 60 CGAGTTATCA CTCGGTGTGT CGTTGCTTCG CTGATATAGT TGCCGAGATG GAACTGTTTT 135540 .......... .......... .......... .......... .......... .......... 60 GGGGAGGGGG CTGTTTAATA TGATTCTTTG GGTTATATGT GTTATTGGTA TTGTTGTGGA 135480 .......... .......... .......... .......... .......... .......... 60 TAATTTGGAT TGTTGTCGGA TTGGGACGAA GTAAGGAAAA TAGGGGAGGT GCTGCCGAAT 135420 .......... .......... .......... .......... .......... .......... 60 TTTCGTTAGA TTATTAGCTA GCTTACAAGA AAGTAAAGCA CGATGTTTAT CTAATTGCGG 135360 .......... .......... .......... .......... .......... .......... 60 CACGATTGTT GCTTGTTATA GATTAATAGC TTGAGCAGTA AATATTGGAC GTGCGGCTCG 135300 ||| ||| | |||||||||| |||||||||| || ||||||| .......... .......... .ATTTATACC TTGAGCAGTA AATATTGGAC GTACGGCTCG 99 ATTATACGGT ATGTAACGCT GTCCCTTCTT TCTTTGCTTG GCATGACTTT TAAAAATAAG 135240 | ||| || ACTATTCG.. .......... .......... .......... .......... .......... 107 CGAATAACGG ACAGATTTGA TACTTACCTC TAAAGCGTCT AGGTGATGTA TATTCTTGCT 135180 .......... .......... .......... .......... .......... .......... 107 TCCACAATTA TTCCTCTATA TATCGGTTAT GTCTAAGGCT ATGATGATCT CTAATATCTA 135120 .......... .......... .......... .......... .......... .......... 107 TGGTAATGCT TCTTAGAGTC ATTGAAATTT TACGTTTTCA TATCGTATTA AAGGTTCATA 135060 .......... .......... .......... .......... .......... .......... 107 ATCTTGATAA AATATTAATC TTTGGTAATA CTCTTTGCTG GTTCACGTTG ATTGTTCTAT 135000 .......... .......... .......... .......... .......... .......... 107 TGAGTTATAA GAAATGATTT TAATTGCATA TGGTTGCTCA CAATATTCTG CTCGTGCATA 134940 .......... .......... .......... .......... .......... .......... 107 GAGTCATTTA TCATTTCACC GAGTCCCGGG CCGGGTAATG TTCGTGCGGA GTTTCTTGCA 134880 .......... .......... .......... .......... .......... .......... 107 TATGTCACCG AGTTCCTCAC TAGAGGGCCG GGTATGTATA TTATATATAT GATTGGTGAT 134820 .......... .......... .......... .......... .......... .......... 107 GAGGATGGTT ATGATGATGA TGATGACGGA GATGACGTGA TGATTATTTT GCCGAGCCCC 134760 .......... .......... .......... .......... .......... .......... 107 TTACTAGGGA AGCTGGGCAC CTTAAATGTT AAATATATGC ATGATTTTCA CTTAAAAAGT 134700 .......... .......... .......... .......... .......... .......... 107 ATATGTGTAG CGATATTTTG TTTCGAGTTG CCACATTGGT ATCCTGTCAT CTTTACCTTA 134640 .......... .......... .......... .......... .......... .......... 107 TGCTTTACAT ACTCAGTACA TTGTCCGTAC TGACCCCCCC TTTCCTCGGG GGGCTGCGTT 134580 .......... .......... .......... .......... .......... .......... 107 TCATGCCCGC AGGTGTAGAC GCGCAGTTCG GTGATCCTCC CGCCTAGGAT ATCTACTCTG 134520 |||||||| || ||||||| |||||||||| |||||||||| |||||||||| .......... ..GTGTAGAC GCTCAGTTCG GTGATCCTCC CGCCTAGGAT ATCTACTCTG 155 CTGATTGGGA GAGCTCCACT GTTCCGGAGC CCATTCGTTT TGGTACATAA CTT-TTGTGT 134461 || |||||| |||||||||| |||||||||| ||| |||||| |||||||||| ||| || ||| CTTTTTGGGA GAGCTCCACT GTTCCGGAGC CCAGTCGTTT TGGTACATAA CTTCTTATGT 215 AGTCTTTTGC TCGTCTATGG GTATGGCGGG GCCCTGTCCC GTCGAGTTTC ACTAATGTAC 134401 |||||||||| | |||||||| |||||||||| |||||||||| ||| |||||| |||| | ||| AGTCTTTTGC TTGTCTATGG GTATGGCGGG GCCCTGTCCC GTCAAGTTTC ACTACTATAC 275 CCTTAGAGGT CTGTGGACAT TATGTGGGTT GTATATATAT GTTTTGGATA ATGGTCTGGA 134341 ||||||||| |||| ||||| |||||||| ||||| ||| |||||||||| |||||||||| TCTTAGAGGT CTGTAGACAT CGTGTGGGTT GTATAATTAT GTTTTGGATA ATGGTCTGGA 335 CATGGTTTGT TTGGGATGTC CGCTTGTACA GGGGCAGCCT TGTCGGCTGT GTACATCATT 134281 |||||||||| |||||||||| | ||||||| | ||||||| |||||| ||| | |||||||| CATGGTTTGT TTGGGATGTC CATTTGTACA AGTGCAGCCT TGTCGGTTGT GAACATCATT 395 ATGCTTTGAA TAGTGGCGGC CTTGTCGGCT CGCGTATGCT GTTATGGTTG AATGGTTATG 134221 || ||| ||||||| || || ||||||| ||||||||| ||||| GTGTATTGTG TAGTGGCAGC CTCGTCGGCT -GCGTATGCT ATTATG.... .......... 440 ACTCCTTATG AGACAGGTCC TCTTATATAT ATATATATGA CGTTGGGGTT GGCTTGATTT 134161 .......... .......... .......... .......... .......... .......... 440 GATTAAATTC CATATTGTCT TAGTTTCAGT TGGTCATACT TAGCAGGTTT GTAT 134107 ||| | || .......... .......... .......... .......... ......TTTT GGAT 448 hqPGS_C10HBa0115K16.1-_SGN-E305738+ (135958 135900,135338 135292,134567 134235,134114 134107) ******************************************************************************** EST sequence 186 +strand 542 n (File: SGN-E374135+) 1 AGCCATGGAA ATGGAGAAAA CCAGCCATTA AACTCTTGGA CAGCAGCTGC AAAGAAATTG 61 ATTTATACCT TGAGCAGTAA ATATTGGACG TACGGCTCGA CTATTCGGTG TAGACGCTCA 121 GTTCGGTGAT CCTCCCGCCT AGGATATCTA CTCTGCTTTT TGGGAGAGCT CCACTGTTCC 181 GGAGCCCAGT CGTTTTGGTA CATAACTTCT TATGTAGTCT TTTGCTTGTC TATGGGTATG 241 GCGGGGCCCT GTCCCGTCAA GTTTCACTAC TATACTCTTA GAGGTCTGTA GACATCGTGT 301 GGGTTGTATA ATTATGTTTT GGATAATGGT CTGGACATGG TTTGTTTGGG ATGTCCATTT 361 GTACAAGTGC AGCCTTGTCG GTTGTGAACA TCATTGTGTA TTGTGTAGTG GCAGCCTCGT 421 CGGCTGCGTA TGCTATTATG TTTTGGATAG TGGCGGCCTT GTCGGCTCGC ATATGTTGTT 481 ACGATTTAAT GGTTATGACT CTTTATGAGA TAGATCCACT TTATATATAA AAAAAAAAAA 541 AA Predicted gene structure (within gDNA segment 136336 to 131850): Exon 1 135958 135900 ( 59 n); cDNA 1 60 ( 60 n); score: 0.839 Intron 1 135899 135339 ( 561 n); Pd: 0.997 (s: 0.81), Pa: 0.868 (s: 0.89) Exon 2 135338 135292 ( 47 n); cDNA 61 107 ( 47 n); score: 0.894 Intron 2 135291 134568 ( 724 n); Pd: 0.991 (s: 0.89), Pa: 0.000 (s: 0.98) Exon 3 134567 134235 ( 333 n); cDNA 108 440 ( 333 n); score: 0.902 Intron 3 134234 134115 ( 120 n); Pd: 0.086 (s: 0.82), Pa: 0.922 (s: 0) Exon 4 134114 134107 ( 8 n); cDNA 441 448 ( 8 n); score: 0.750 PPA cDNA 527 542 MATCH C10HBa0115K16.1- SGN-E374135+ 0.893 447 0.825 C PGS_C10HBa0115K16.1-_SGN-E374135+ (135958 135900,135338 135292,134567 134235,134114 134107) Alignment (genomic DNA sequence = upper lines): AGCCATGGAA ATGGAGA-AA CCAACCCTGC AACTCTTGGC CAGCAGCTGC AAATAATTTG 135900 |||||||||| ||||||| || ||| || | ||||||||| |||||||||| ||| || ||| AGCCATGGAA ATGGAGAAAA CCAGCCATTA AACTCTTGGA CAGCAGCTGC AAAGAAATTG 60 GTTAGTAATC TCCTTGTTTG GTGTGTTAAT TCTTTAGAAT ACCCTTGTTA ATTATCCATT 135840 .......... .......... .......... .......... .......... .......... 60 AATTTTAAGA AGGGGGCGTG ACCAGTAGCT TAGGAAGTTT GTTTTAGTTA TTGAATGTAC 135780 .......... .......... .......... .......... .......... .......... 60 TAAGTATGAA TGGAAACCAT AATCGGATTA TTAGTGGTGT CGTGTTGGTG CTTGGGCTGT 135720 .......... .......... .......... .......... .......... .......... 60 TTTGACTAAA GCAAACTGCA GGAAAATTCT GTTTTGGCAT TATGTATATG TTGAATGTGA 135660 .......... .......... .......... .......... .......... .......... 60 TTATGAGTAT ATACTCCAAA GGATGAATAC GATAAGGTAG ATGTGTTACG AATTATAAAA 135600 .......... .......... .......... .......... .......... .......... 60 CGAGTTATCA CTCGGTGTGT CGTTGCTTCG CTGATATAGT TGCCGAGATG GAACTGTTTT 135540 .......... .......... .......... .......... .......... .......... 60 GGGGAGGGGG CTGTTTAATA TGATTCTTTG GGTTATATGT GTTATTGGTA TTGTTGTGGA 135480 .......... .......... .......... .......... .......... .......... 60 TAATTTGGAT TGTTGTCGGA TTGGGACGAA GTAAGGAAAA TAGGGGAGGT GCTGCCGAAT 135420 .......... .......... .......... .......... .......... .......... 60 TTTCGTTAGA TTATTAGCTA GCTTACAAGA AAGTAAAGCA CGATGTTTAT CTAATTGCGG 135360 .......... .......... .......... .......... .......... .......... 60 CACGATTGTT GCTTGTTATA GATTAATAGC TTGAGCAGTA AATATTGGAC GTGCGGCTCG 135300 ||| ||| | |||||||||| |||||||||| || ||||||| .......... .......... .ATTTATACC TTGAGCAGTA AATATTGGAC GTACGGCTCG 99 ATTATACGGT ATGTAACGCT GTCCCTTCTT TCTTTGCTTG GCATGACTTT TAAAAATAAG 135240 | ||| || ACTATTCG.. .......... .......... .......... .......... .......... 107 CGAATAACGG ACAGATTTGA TACTTACCTC TAAAGCGTCT AGGTGATGTA TATTCTTGCT 135180 .......... .......... .......... .......... .......... .......... 107 TCCACAATTA TTCCTCTATA TATCGGTTAT GTCTAAGGCT ATGATGATCT CTAATATCTA 135120 .......... .......... .......... .......... .......... .......... 107 TGGTAATGCT TCTTAGAGTC ATTGAAATTT TACGTTTTCA TATCGTATTA AAGGTTCATA 135060 .......... .......... .......... .......... .......... .......... 107 ATCTTGATAA AATATTAATC TTTGGTAATA CTCTTTGCTG GTTCACGTTG ATTGTTCTAT 135000 .......... .......... .......... .......... .......... .......... 107 TGAGTTATAA GAAATGATTT TAATTGCATA TGGTTGCTCA CAATATTCTG CTCGTGCATA 134940 .......... .......... .......... .......... .......... .......... 107 GAGTCATTTA TCATTTCACC GAGTCCCGGG CCGGGTAATG TTCGTGCGGA GTTTCTTGCA 134880 .......... .......... .......... .......... .......... .......... 107 TATGTCACCG AGTTCCTCAC TAGAGGGCCG GGTATGTATA TTATATATAT GATTGGTGAT 134820 .......... .......... .......... .......... .......... .......... 107 GAGGATGGTT ATGATGATGA TGATGACGGA GATGACGTGA TGATTATTTT GCCGAGCCCC 134760 .......... .......... .......... .......... .......... .......... 107 TTACTAGGGA AGCTGGGCAC CTTAAATGTT AAATATATGC ATGATTTTCA CTTAAAAAGT 134700 .......... .......... .......... .......... .......... .......... 107 ATATGTGTAG CGATATTTTG TTTCGAGTTG CCACATTGGT ATCCTGTCAT CTTTACCTTA 134640 .......... .......... .......... .......... .......... .......... 107 TGCTTTACAT ACTCAGTACA TTGTCCGTAC TGACCCCCCC TTTCCTCGGG GGGCTGCGTT 134580 .......... .......... .......... .......... .......... .......... 107 TCATGCCCGC AGGTGTAGAC GCGCAGTTCG GTGATCCTCC CGCCTAGGAT ATCTACTCTG 134520 |||||||| || ||||||| |||||||||| |||||||||| |||||||||| .......... ..GTGTAGAC GCTCAGTTCG GTGATCCTCC CGCCTAGGAT ATCTACTCTG 155 CTGATTGGGA GAGCTCCACT GTTCCGGAGC CCATTCGTTT TGGTACATAA CTT-TTGTGT 134461 || |||||| |||||||||| |||||||||| ||| |||||| |||||||||| ||| || ||| CTTTTTGGGA GAGCTCCACT GTTCCGGAGC CCAGTCGTTT TGGTACATAA CTTCTTATGT 215 AGTCTTTTGC TCGTCTATGG GTATGGCGGG GCCCTGTCCC GTCGAGTTTC ACTAATGTAC 134401 |||||||||| | |||||||| |||||||||| |||||||||| ||| |||||| |||| | ||| AGTCTTTTGC TTGTCTATGG GTATGGCGGG GCCCTGTCCC GTCAAGTTTC ACTACTATAC 275 CCTTAGAGGT CTGTGGACAT TATGTGGGTT GTATATATAT GTTTTGGATA ATGGTCTGGA 134341 ||||||||| |||| ||||| |||||||| ||||| ||| |||||||||| |||||||||| TCTTAGAGGT CTGTAGACAT CGTGTGGGTT GTATAATTAT GTTTTGGATA ATGGTCTGGA 335 CATGGTTTGT TTGGGATGTC CGCTTGTACA GGGGCAGCCT TGTCGGCTGT GTACATCATT 134281 |||||||||| |||||||||| | ||||||| | ||||||| |||||| ||| | |||||||| CATGGTTTGT TTGGGATGTC CATTTGTACA AGTGCAGCCT TGTCGGTTGT GAACATCATT 395 ATGCTTTGAA TAGTGGCGGC CTTGTCGGCT CGCGTATGCT GTTATGGTTG AATGGTTATG 134221 || ||| ||||||| || || ||||||| ||||||||| ||||| GTGTATTGTG TAGTGGCAGC CTCGTCGGCT -GCGTATGCT ATTATG.... .......... 440 ACTCCTTATG AGACAGGTCC TCTTATATAT ATATATATGA CGTTGGGGTT GGCTTGATTT 134161 .......... .......... .......... .......... .......... .......... 440 GATTAAATTC CATATTGTCT TAGTTTCAGT TGGTCATACT TAGCAGGTTT GTAT 134107 ||| | || .......... .......... .......... .......... ......TTTT GGAT 448 hqPGS_C10HBa0115K16.1-_SGN-E374135+ (135958 135900,135338 135292,134567 134235,134114 134107) ******************************************************************************** EST sequence 16 -strand 432 n (File: SGN-E225616-) 1 TATTCGGTGT AGACGCTCAG TTCGGTGATC CTCCCGCCTA GGATATCTAC TCTGCTTTTT 61 GGGAGAGCTC CACTGTTCCG GAGCCCAGTC GTTTTGGTAC ATAACTTCTT ATGTAGTCTT 121 TTGCTTGTCT ATGGGTATGG CGGGGCCCTG TCCCGTCAAG TTTCACTACT ATACTCTTAG 181 AGGTCTGTAG ACATCGTGTG GGTTGTATAA TTATGTTTTG GATAATGGTC TGGACATGGT 241 TTGTTTGGGA TGTCCATTTG TACAAGTGCA GCCTTGTCGG TTGTGAACAT CATTGTGTAT 301 TGTGTAGTGG CAGCCTCGTC GGCTGCGTAT GCTATTATGT TTTGGATAGT GGCGGCCTTG 361 TCGGCTCGCA TATGTTGTTA CGATTTAATG GTTATGACTC TTTATGAAAA AACCAAAAAA 421 AAAAAAAAAA AA Predicted gene structure (within gDNA segment 135336 to 131950): Exon 1 134568 134235 ( 334 n); cDNA 6 339 ( 334 n); score: 0.903 Intron 1 134234 134115 ( 120 n); Pd: 0.086 (s: 0.82), Pa: 0.922 (s: 0) Exon 2 134114 134107 ( 8 n); cDNA 340 347 ( 8 n); score: 0.750 PPA cDNA 415 432 MATCH C10HBa0115K16.1- SGN-E225616- 0.903 342 0.792 C PGS_C10HBa0115K16.1-_SGN-E225616- (134568 134235,134114 134107) Alignment (genomic DNA sequence = upper lines): GGTGTAGACG CGCAGTTCGG TGATCCTCCC GCCTAGGATA TCTACTCTGC TGATTGGGAG 134509 |||||||||| | |||||||| |||||||||| |||||||||| |||||||||| | ||||||| GGTGTAGACG CTCAGTTCGG TGATCCTCCC GCCTAGGATA TCTACTCTGC TTTTTGGGAG 65 AGCTCCACTG TTCCGGAGCC CATTCGTTTT GGTACATAAC TT-TTGTGTA GTCTTTTGCT 134450 |||||||||| |||||||||| || ||||||| |||||||||| || || |||| |||||||||| AGCTCCACTG TTCCGGAGCC CAGTCGTTTT GGTACATAAC TTCTTATGTA GTCTTTTGCT 125 CGTCTATGGG TATGGCGGGG CCCTGTCCCG TCGAGTTTCA CTAATGTACC CTTAGAGGTC 134390 ||||||||| |||||||||| |||||||||| || ||||||| ||| | ||| |||||||||| TGTCTATGGG TATGGCGGGG CCCTGTCCCG TCAAGTTTCA CTACTATACT CTTAGAGGTC 185 TGTGGACATT ATGTGGGTTG TATATATATG TTTTGGATAA TGGTCTGGAC ATGGTTTGTT 134330 ||| ||||| ||||||||| |||| |||| |||||||||| |||||||||| |||||||||| TGTAGACATC GTGTGGGTTG TATAATTATG TTTTGGATAA TGGTCTGGAC ATGGTTTGTT 245 TGGGATGTCC GCTTGTACAG GGGCAGCCTT GTCGGCTGTG TACATCATTA TGCTTTGAAT 134270 |||||||||| ||||||| | |||||||| ||||| |||| |||||||| || ||| | TGGGATGTCC ATTTGTACAA GTGCAGCCTT GTCGGTTGTG AACATCATTG TGTATTGTGT 305 AGTGGCGGCC TTGTCGGCTC GCGTATGCTG TTATGGTTGA ATGGTTATGA CTCCTTATGA 134210 |||||| ||| | ||||||| ||||||||| ||||| AGTGGCAGCC TCGTCGGCT- GCGTATGCTA TTATG..... .......... .......... 339 GACAGGTCCT CTTATATATA TATATATGAC GTTGGGGTTG GCTTGATTTG ATTAAATTCC 134150 .......... .......... .......... .......... .......... .......... 339 ATATTGTCTT AGTTTCAGTT GGTCATACTT AGCAGGTTTG TAT 134107 |||| || .......... .......... .......... .....TTTTG GAT 347 hqPGS_C10HBa0115K16.1-_SGN-E225616- (134568 134235,134114 134107) ******************************************************************************** EST sequence 142 +strand 495 n (File: SGN-E306317+) 1 TAAACTCTTG GACAGCAGCT GCAAAGAAAT TGGTGTAGAC GCTCAGTTCG GTGATCCTCC 61 CGCCTAGGAT ATCTACTCTG CTGTTTGGGA GAGCTCCACT GTTCCGGAGC CCAGTCGTTT 121 TGGTACATAA CTTCTTATGT AGTCTTTTGC TTGTCTATGG GTATGGCGGG GCCCTGTCCC 181 GTCAAGTTTC ACTACTATAC TCTTAGAGGT CTGTAGACAT CGTGTGGGTT GTATAATTAT 241 GTTTTGGATA ATGGTCTGGA CATGGTTTGT TTGGGATGTC CATTTGTACA AGTGCAGCCT 301 TGTCGGTTGT GAACATCATT GTGTATTGTG TAGTGGCAGC CTCGTCGGCT GCGTATGCTA 361 TTATGTTTTG GATAGTGGCG GCCTTGTCGG CTCGCATATG TTGTTACGAT TTAATGGTTA 421 TGACTCTTTA TGAGATAGAT CCACTTTATA TATATATATA TATATATGGC GTTGGGTTTN 481 AAAAAAAAAA AAAAA Predicted gene structure (within gDNA segment 135586 to 131570): Exon 1 134567 134235 ( 333 n); cDNA 33 365 ( 333 n); score: 0.905 Intron 1 134234 134115 ( 120 n); Pd: 0.086 (s: 0.82), Pa: 0.922 (s: 0) Exon 2 134114 134107 ( 8 n); cDNA 366 373 ( 8 n); score: 0.750 PPA cDNA 481 495 MATCH C10HBa0115K16.1- SGN-E306317+ 0.905 341 0.689 C PGS_C10HBa0115K16.1-_SGN-E306317+ (134567 134235,134114 134107) Alignment (genomic DNA sequence = upper lines): GTGTAGACGC GCAGTTCGGT GATCCTCCCG CCTAGGATAT CTACTCTGCT GATTGGGAGA 134508 |||||||||| ||||||||| |||||||||| |||||||||| |||||||||| | |||||||| GTGTAGACGC TCAGTTCGGT GATCCTCCCG CCTAGGATAT CTACTCTGCT GTTTGGGAGA 92 GCTCCACTGT TCCGGAGCCC ATTCGTTTTG GTACATAACT T-TTGTGTAG TCTTTTGCTC 134449 |||||||||| |||||||||| | |||||||| |||||||||| | || ||||| ||||||||| GCTCCACTGT TCCGGAGCCC AGTCGTTTTG GTACATAACT TCTTATGTAG TCTTTTGCTT 152 GTCTATGGGT ATGGCGGGGC CCTGTCCCGT CGAGTTTCAC TAATGTACCC TTAGAGGTCT 134389 |||||||||| |||||||||| |||||||||| | |||||||| || | ||| | |||||||||| GTCTATGGGT ATGGCGGGGC CCTGTCCCGT CAAGTTTCAC TACTATACTC TTAGAGGTCT 212 GTGGACATTA TGTGGGTTGT ATATATATGT TTTGGATAAT GGTCTGGACA TGGTTTGTTT 134329 || ||||| |||||||||| ||| ||||| |||||||||| |||||||||| |||||||||| GTAGACATCG TGTGGGTTGT ATAATTATGT TTTGGATAAT GGTCTGGACA TGGTTTGTTT 272 GGGATGTCCG CTTGTACAGG GGCAGCCTTG TCGGCTGTGT ACATCATTAT GCTTTGAATA 134269 ||||||||| ||||||| | ||||||||| |||| |||| |||||||| | | ||| || GGGATGTCCA TTTGTACAAG TGCAGCCTTG TCGGTTGTGA ACATCATTGT GTATTGTGTA 332 GTGGCGGCCT TGTCGGCTCG CGTATGCTGT TATGGTTGAA TGGTTATGAC TCCTTATGAG 134209 ||||| |||| ||||||| | |||||||| | |||| GTGGCAGCCT CGTCGGCT-G CGTATGCTAT TATG...... .......... .......... 365 ACAGGTCCTC TTATATATAT ATATATGACG TTGGGGTTGG CTTGATTTGA TTAAATTCCA 134149 .......... .......... .......... .......... .......... .......... 365 TATTGTCTTA GTTTCAGTTG GTCATACTTA GCAGGTTTGT AT 134107 |||| || .......... .......... .......... ....TTTTGG AT 373 hqPGS_C10HBa0115K16.1-_SGN-E306317+ (134567 134235,134114 134107) ******************************************************************************** EST sequence 232 +strand 523 n (File: SGN-E303695+) 1 AAATGGAGAA AACCAGCCAT TAAACTCTTG GACAGCAGCT GCAAAGAAAT TGGTGTAGAC 61 GCTCAGTTCG GTGATCCTCC CGCCTAGGAT ATCTACTCTG CTTTTTGGGA GAGCTCCACT 121 GTTCCGGAGC CCAGTCGTTT TGGTACATAA CTTCTTATGT AGTCTTTTGC TTGTCTATGG 181 GTATGGCGGG GCCCTGTCCC GTCAAGTTTC ACTACTATAC TCTTAGAGGT CTGTAGACAT 241 CGTGTGGGTT GTATAATTAT GTTTTGGATA ATGGTCTGGA CATGGTTTGT TTGGGATGTC 301 CATTTGTACA AGTGCAGCCT TGTCGGTTGT GAACATCATT GTGTATTGTG TAGTGGCAGC 361 CTCGTCGGCT GCGTATGCTA TTATGTTTTG GATAGTGGCG GCCTTGTCGG CTCGCATATG 421 TTGTTACGAT TTAATGGTTA TGACTCTTTA TGAGATAGAT CCACTTTATA TATATATATA 481 TATATATGGC GTTGGGTTTA GCTTGATTTG ATTAAAAAAA AAA Predicted gene structure (within gDNA segment 135786 to 133474): Exon 1 134567 134235 ( 333 n); cDNA 53 385 ( 333 n); score: 0.902 Intron 1 134234 134115 ( 120 n); Pd: 0.086 (s: 0.82), Pa: 0.922 (s: 0) Exon 2 134114 134107 ( 8 n); cDNA 386 393 ( 8 n); score: 0.750 PPA cDNA 514 523 MATCH C10HBa0115K16.1- SGN-E303695+ 0.902 341 0.652 C PGS_C10HBa0115K16.1-_SGN-E303695+ (134567 134235,134114 134107) Alignment (genomic DNA sequence = upper lines): GTGTAGACGC GCAGTTCGGT GATCCTCCCG CCTAGGATAT CTACTCTGCT GATTGGGAGA 134508 |||||||||| ||||||||| |||||||||| |||||||||| |||||||||| |||||||| GTGTAGACGC TCAGTTCGGT GATCCTCCCG CCTAGGATAT CTACTCTGCT TTTTGGGAGA 112 GCTCCACTGT TCCGGAGCCC ATTCGTTTTG GTACATAACT T-TTGTGTAG TCTTTTGCTC 134449 |||||||||| |||||||||| | |||||||| |||||||||| | || ||||| ||||||||| GCTCCACTGT TCCGGAGCCC AGTCGTTTTG GTACATAACT TCTTATGTAG TCTTTTGCTT 172 GTCTATGGGT ATGGCGGGGC CCTGTCCCGT CGAGTTTCAC TAATGTACCC TTAGAGGTCT 134389 |||||||||| |||||||||| |||||||||| | |||||||| || | ||| | |||||||||| GTCTATGGGT ATGGCGGGGC CCTGTCCCGT CAAGTTTCAC TACTATACTC TTAGAGGTCT 232 GTGGACATTA TGTGGGTTGT ATATATATGT TTTGGATAAT GGTCTGGACA TGGTTTGTTT 134329 || ||||| |||||||||| ||| ||||| |||||||||| |||||||||| |||||||||| GTAGACATCG TGTGGGTTGT ATAATTATGT TTTGGATAAT GGTCTGGACA TGGTTTGTTT 292 GGGATGTCCG CTTGTACAGG GGCAGCCTTG TCGGCTGTGT ACATCATTAT GCTTTGAATA 134269 ||||||||| ||||||| | ||||||||| |||| |||| |||||||| | | ||| || GGGATGTCCA TTTGTACAAG TGCAGCCTTG TCGGTTGTGA ACATCATTGT GTATTGTGTA 352 GTGGCGGCCT TGTCGGCTCG CGTATGCTGT TATGGTTGAA TGGTTATGAC TCCTTATGAG 134209 ||||| |||| ||||||| | |||||||| | |||| GTGGCAGCCT CGTCGGCT-G CGTATGCTAT TATG...... .......... .......... 385 ACAGGTCCTC TTATATATAT ATATATGACG TTGGGGTTGG CTTGATTTGA TTAAATTCCA 134149 .......... .......... .......... .......... .......... .......... 385 TATTGTCTTA GTTTCAGTTG GTCATACTTA GCAGGTTTGT AT 134107 |||| || .......... .......... .......... ....TTTTGG AT 393 hqPGS_C10HBa0115K16.1-_SGN-E303695+ (134567 134235,134114 134107) ******************************************************************************** EST sequence 244 +strand 519 n (File: SGN-E310669+) 1 AGCCATGGAA ATGGAGAAAA CCAGCCATTA AACTCTTGGA CAGCAGCTGC AAAGAAATTG 61 ATTTATACCT TGAGCAGTAA ATATTGGACG TACGGCTCGA CTATTCGGTG TAGACGCTCA 121 GTTCGGTGAT CCTCCCGCCT AGGATATCTA CTCTGCTGTT TGGGAGAGCT CCACTGTTCC 181 GGAGCCCAGT CGTTTTGGTA CATAACTTCT TATGTAGTCT TTTGCTTGTC TATGGGTATG 241 GCGGGGCCCT GTCCCGTCAA GTTTCACTAC TATACTCTTA GAGGTCTGTA GACATCGTGT 301 GGGTTGTATA ATTATGTTTT GGATAATGGT CTGGACATGG TTTGTTTGGG ATGTCCATTT 361 GTACAAGTGC AGCCTTGTCG GTTGTGAACA TCATTGTGTA TTGTGTAGTG GCAGCCTCGT 421 CGGCTGCGTA TGCTATTATG TTTTGGATAG TGGCGGCCTT GTCGGCTCGC ATATGTTGTT 481 ACGATTTAAT GGTTATGACT CTTTATGAAA AAAAAAAAA Predicted gene structure (within gDNA segment 136336 to 132080): Exon 1 135958 135900 ( 59 n); cDNA 1 60 ( 60 n); score: 0.839 Intron 1 135899 135339 ( 561 n); Pd: 0.997 (s: 0.81), Pa: 0.868 (s: 0.89) Exon 2 135338 135292 ( 47 n); cDNA 61 107 ( 47 n); score: 0.894 Intron 2 135291 134568 ( 724 n); Pd: 0.991 (s: 0.89), Pa: 0.000 (s: 0.98) Exon 3 134567 134235 ( 333 n); cDNA 108 440 ( 333 n); score: 0.905 PPA cDNA 508 519 MATCH C10HBa0115K16.1- SGN-E310669+ 0.895 439 0.846 C PGS_C10HBa0115K16.1-_SGN-E310669+ (135958 135900,135338 135292,134567 134235) Alignment (genomic DNA sequence = upper lines): AGCCATGGAA ATGGAGA-AA CCAACCCTGC AACTCTTGGC CAGCAGCTGC AAATAATTTG 135900 |||||||||| ||||||| || ||| || | ||||||||| |||||||||| ||| || ||| AGCCATGGAA ATGGAGAAAA CCAGCCATTA AACTCTTGGA CAGCAGCTGC AAAGAAATTG 60 GTTAGTAATC TCCTTGTTTG GTGTGTTAAT TCTTTAGAAT ACCCTTGTTA ATTATCCATT 135840 .......... .......... .......... .......... .......... .......... 60 AATTTTAAGA AGGGGGCGTG ACCAGTAGCT TAGGAAGTTT GTTTTAGTTA TTGAATGTAC 135780 .......... .......... .......... .......... .......... .......... 60 TAAGTATGAA TGGAAACCAT AATCGGATTA TTAGTGGTGT CGTGTTGGTG CTTGGGCTGT 135720 .......... .......... .......... .......... .......... .......... 60 TTTGACTAAA GCAAACTGCA GGAAAATTCT GTTTTGGCAT TATGTATATG TTGAATGTGA 135660 .......... .......... .......... .......... .......... .......... 60 TTATGAGTAT ATACTCCAAA GGATGAATAC GATAAGGTAG ATGTGTTACG AATTATAAAA 135600 .......... .......... .......... .......... .......... .......... 60 CGAGTTATCA CTCGGTGTGT CGTTGCTTCG CTGATATAGT TGCCGAGATG GAACTGTTTT 135540 .......... .......... .......... .......... .......... .......... 60 GGGGAGGGGG CTGTTTAATA TGATTCTTTG GGTTATATGT GTTATTGGTA TTGTTGTGGA 135480 .......... .......... .......... .......... .......... .......... 60 TAATTTGGAT TGTTGTCGGA TTGGGACGAA GTAAGGAAAA TAGGGGAGGT GCTGCCGAAT 135420 .......... .......... .......... .......... .......... .......... 60 TTTCGTTAGA TTATTAGCTA GCTTACAAGA AAGTAAAGCA CGATGTTTAT CTAATTGCGG 135360 .......... .......... .......... .......... .......... .......... 60 CACGATTGTT GCTTGTTATA GATTAATAGC TTGAGCAGTA AATATTGGAC GTGCGGCTCG 135300 ||| ||| | |||||||||| |||||||||| || ||||||| .......... .......... .ATTTATACC TTGAGCAGTA AATATTGGAC GTACGGCTCG 99 ATTATACGGT ATGTAACGCT GTCCCTTCTT TCTTTGCTTG GCATGACTTT TAAAAATAAG 135240 | ||| || ACTATTCG.. .......... .......... .......... .......... .......... 107 CGAATAACGG ACAGATTTGA TACTTACCTC TAAAGCGTCT AGGTGATGTA TATTCTTGCT 135180 .......... .......... .......... .......... .......... .......... 107 TCCACAATTA TTCCTCTATA TATCGGTTAT GTCTAAGGCT ATGATGATCT CTAATATCTA 135120 .......... .......... .......... .......... .......... .......... 107 TGGTAATGCT TCTTAGAGTC ATTGAAATTT TACGTTTTCA TATCGTATTA AAGGTTCATA 135060 .......... .......... .......... .......... .......... .......... 107 ATCTTGATAA AATATTAATC TTTGGTAATA CTCTTTGCTG GTTCACGTTG ATTGTTCTAT 135000 .......... .......... .......... .......... .......... .......... 107 TGAGTTATAA GAAATGATTT TAATTGCATA TGGTTGCTCA CAATATTCTG CTCGTGCATA 134940 .......... .......... .......... .......... .......... .......... 107 GAGTCATTTA TCATTTCACC GAGTCCCGGG CCGGGTAATG TTCGTGCGGA GTTTCTTGCA 134880 .......... .......... .......... .......... .......... .......... 107 TATGTCACCG AGTTCCTCAC TAGAGGGCCG GGTATGTATA TTATATATAT GATTGGTGAT 134820 .......... .......... .......... .......... .......... .......... 107 GAGGATGGTT ATGATGATGA TGATGACGGA GATGACGTGA TGATTATTTT GCCGAGCCCC 134760 .......... .......... .......... .......... .......... .......... 107 TTACTAGGGA AGCTGGGCAC CTTAAATGTT AAATATATGC ATGATTTTCA CTTAAAAAGT 134700 .......... .......... .......... .......... .......... .......... 107 ATATGTGTAG CGATATTTTG TTTCGAGTTG CCACATTGGT ATCCTGTCAT CTTTACCTTA 134640 .......... .......... .......... .......... .......... .......... 107 TGCTTTACAT ACTCAGTACA TTGTCCGTAC TGACCCCCCC TTTCCTCGGG GGGCTGCGTT 134580 .......... .......... .......... .......... .......... .......... 107 TCATGCCCGC AGGTGTAGAC GCGCAGTTCG GTGATCCTCC CGCCTAGGAT ATCTACTCTG 134520 |||||||| || ||||||| |||||||||| |||||||||| |||||||||| .......... ..GTGTAGAC GCTCAGTTCG GTGATCCTCC CGCCTAGGAT ATCTACTCTG 155 CTGATTGGGA GAGCTCCACT GTTCCGGAGC CCATTCGTTT TGGTACATAA CTT-TTGTGT 134461 ||| |||||| |||||||||| |||||||||| ||| |||||| |||||||||| ||| || ||| CTGTTTGGGA GAGCTCCACT GTTCCGGAGC CCAGTCGTTT TGGTACATAA CTTCTTATGT 215 AGTCTTTTGC TCGTCTATGG GTATGGCGGG GCCCTGTCCC GTCGAGTTTC ACTAATGTAC 134401 |||||||||| | |||||||| |||||||||| |||||||||| ||| |||||| |||| | ||| AGTCTTTTGC TTGTCTATGG GTATGGCGGG GCCCTGTCCC GTCAAGTTTC ACTACTATAC 275 CCTTAGAGGT CTGTGGACAT TATGTGGGTT GTATATATAT GTTTTGGATA ATGGTCTGGA 134341 ||||||||| |||| ||||| |||||||| ||||| ||| |||||||||| |||||||||| TCTTAGAGGT CTGTAGACAT CGTGTGGGTT GTATAATTAT GTTTTGGATA ATGGTCTGGA 335 CATGGTTTGT TTGGGATGTC CGCTTGTACA GGGGCAGCCT TGTCGGCTGT GTACATCATT 134281 |||||||||| |||||||||| | ||||||| | ||||||| |||||| ||| | |||||||| CATGGTTTGT TTGGGATGTC CATTTGTACA AGTGCAGCCT TGTCGGTTGT GAACATCATT 395 ATGCTTTGAA TAGTGGCGGC CTTGTCGGCT CGCGTATGCT GTTATG 134235 || ||| ||||||| || || ||||||| ||||||||| ||||| GTGTATTGTG TAGTGGCAGC CTCGTCGGCT -GCGTATGCT ATTATG 440 hqPGS_C10HBa0115K16.1-_SGN-E310669+ (135958 135900,135338 135292,134567 134235) ******************************************************************************** EST sequence 144 +strand 606 n (File: SGN-E538151+) 1 GAGAAAACCA GCCATTAAAC TCTTGGACAG CAGCTGCAAA GAAATTGAGT CATTTATCAT 61 TTCACCGAGT CCCGGGCCGG GTAATGTTCG TGCGGAGTTT CTTGCATATG TCACCGAGTC 121 CCTCACTAGA GGGCCGGGAA TGTATATTAT ATATATGATT GGTGATGAGG ATGGTTATGA 181 TGATGATGAT GACGGAGATG ATGTGATGAC TATTTCACTG AGTCCCTCAC TAGAGGGCCG 241 GGTGTAGACG CTCAGTTTGG TGATCCTCCC GCCTAGGATA TCTACTCTGC TGTTTGGGAG 301 AGCTCCACTG TTCCGGAGCC CAGTCGTTTT GGTACATAAC TTCTTATGTA GTCTTTTGCT 361 TGTCTATGGG TATGCGGGGC CCTGTCCCGT CAAGTTTCAC TACTATACTC TTAGAGGTCT 421 GTAGACATCG TGTGGGTTGT ATAATTATGT TTTTGATAAT GGTCTGGACA TGGTTTGTTT 481 GGGATGTCCA CTTGTACAAG TGCAACCTTG TCGGTTGTGT ACATCTTTGT GTATTGTGTA 541 GTGGCAGCCT TGTCGGCTGC GTATGCTATT ATGCTTTGAA TAGTGGCAGC CTTGTCGGCT 601 CGCGTA Predicted gene structure (within gDNA segment 135999 to 133635): Exon 1 135942 135900 ( 43 n); cDNA 5 47 ( 43 n); score: 0.837 Intron 1 135899 134939 ( 961 n); Pd: 0.997 (s: 0.84), Pa: 0.963 (s: 1.00) Exon 2 134938 134744 ( 195 n); cDNA 48 241 ( 194 n); score: 0.933 Intron 2 134743 134568 ( 176 n); Pd: 0.000 (s: 0.78), Pa: 0.000 (s: 0.96) Exon 3 134567 134235 ( 333 n); cDNA 242 573 ( 332 n); score: 0.899 MATCH C10HBa0115K16.1- SGN-E538151+ 0.912 571 0.942 C PGS_C10HBa0115K16.1-_SGN-E538151+ (135942 135900,134938 134744,134567 134235) Alignment (genomic DNA sequence = upper lines): AAACCAACCC TGCAACTCTT GGCCAGCAGC TGCAAATAAT TTGGTTAGTA ATCTCCTTGT 135883 |||||| || | ||||||| || ||||||| |||||| || ||| AAACCAGCCA TTAAACTCTT GGACAGCAGC TGCAAAGAAA TTG....... .......... 47 TTGGTGTGTT AATTCTTTAG AATACCCTTG TTAATTATCC ATTAATTTTA AGAAGGGGGC 135823 .......... .......... .......... .......... .......... .......... 47 GTGACCAGTA GCTTAGGAAG TTTGTTTTAG TTATTGAATG TACTAAGTAT GAATGGAAAC 135763 .......... .......... .......... .......... .......... .......... 47 CATAATCGGA TTATTAGTGG TGTCGTGTTG GTGCTTGGGC TGTTTTGACT AAAGCAAACT 135703 .......... .......... .......... .......... .......... .......... 47 GCAGGAAAAT TCTGTTTTGG CATTATGTAT ATGTTGAATG TGATTATGAG TATATACTCC 135643 .......... .......... .......... .......... .......... .......... 47 AAAGGATGAA TACGATAAGG TAGATGTGTT ACGAATTATA AAACGAGTTA TCACTCGGTG 135583 .......... .......... .......... .......... .......... .......... 47 TGTCGTTGCT TCGCTGATAT AGTTGCCGAG ATGGAACTGT TTTGGGGAGG GGGCTGTTTA 135523 .......... .......... .......... .......... .......... .......... 47 ATATGATTCT TTGGGTTATA TGTGTTATTG GTATTGTTGT GGATAATTTG GATTGTTGTC 135463 .......... .......... .......... .......... .......... .......... 47 GGATTGGGAC GAAGTAAGGA AAATAGGGGA GGTGCTGCCG AATTTTCGTT AGATTATTAG 135403 .......... .......... .......... .......... .......... .......... 47 CTAGCTTACA AGAAAGTAAA GCACGATGTT TATCTAATTG CGGCACGATT GTTGCTTGTT 135343 .......... .......... .......... .......... .......... .......... 47 ATAGATTAAT AGCTTGAGCA GTAAATATTG GACGTGCGGC TCGATTATAC GGTATGTAAC 135283 .......... .......... .......... .......... .......... .......... 47 GCTGTCCCTT CTTTCTTTGC TTGGCATGAC TTTTAAAAAT AAGCGAATAA CGGACAGATT 135223 .......... .......... .......... .......... .......... .......... 47 TGATACTTAC CTCTAAAGCG TCTAGGTGAT GTATATTCTT GCTTCCACAA TTATTCCTCT 135163 .......... .......... .......... .......... .......... .......... 47 ATATATCGGT TATGTCTAAG GCTATGATGA TCTCTAATAT CTATGGTAAT GCTTCTTAGA 135103 .......... .......... .......... .......... .......... .......... 47 GTCATTGAAA TTTTACGTTT TCATATCGTA TTAAAGGTTC ATAATCTTGA TAAAATATTA 135043 .......... .......... .......... .......... .......... .......... 47 ATCTTTGGTA ATACTCTTTG CTGGTTCACG TTGATTGTTC TATTGAGTTA TAAGAAATGA 134983 .......... .......... .......... .......... .......... .......... 47 TTTTAATTGC ATATGGTTGC TCACAATATT CTGCTCGTGC ATAGAGTCAT TTATCATTTC 134923 |||||| |||||||||| .......... .......... .......... .......... ....AGTCAT TTATCATTTC 63 ACCGAGTCCC GGGCCGGGTA ATGTTCGTGC GGAGTTTCTT GCATATGTCA CCGAGTTCCT 134863 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||| ||| ACCGAGTCCC GGGCCGGGTA ATGTTCGTGC GGAGTTTCTT GCATATGTCA CCGAGTCCCT 123 CACTAGAGGG CCGGGTATGT ATATTATATA TATGATTGGT GATGAGGATG GTTATGATGA 134803 |||||||||| ||||| |||| |||||||||| |||||||||| |||||||||| |||||||||| CACTAGAGGG CCGGGAATGT ATATTATATA TATGATTGGT GATGAGGATG GTTATGATGA 183 TGATGATGAC GGAGATGACG TGATGATTAT TTTGCCGAGC CCCTTACTAG GGAAGCTGGG 134743 |||||||||| |||||||| | |||||| ||| || | ||| |||| ||||| | || || TGATGATGAC GGAGATGATG TGATGACTAT TTCACTGAGT CCCTCACTAG AG-GGCCGG. 241 CACCTTAAAT GTTAAATATA TGCATGATTT TCACTTAAAA AGTATATGTG TAGCGATATT 134683 .......... .......... .......... .......... .......... .......... 241 TTGTTTCGAG TTGCCACATT GGTATCCTGT CATCTTTACC TTATGCTTTA CATACTCAGT 134623 .......... .......... .......... .......... .......... .......... 241 ACATTGTCCG TACTGACCCC CCCTTTCCTC GGGGGGCTGC GTTTCATGCC CGCAGGTGTA 134563 ||||| .......... .......... .......... .......... .......... .....GTGTA 246 GACGCGCAGT TCGGTGATCC TCCCGCCTAG GATATCTACT CTGCTGATTG GGAGAGCTCC 134503 ||||| |||| | |||||||| |||||||||| |||||||||| |||||| ||| |||||||||| GACGCTCAGT TTGGTGATCC TCCCGCCTAG GATATCTACT CTGCTGTTTG GGAGAGCTCC 306 ACTGTTCCGG AGCCCATTCG TTTTGGTACA TAACTT-TTG TGTAGTCTTT TGCTCGTCTA 134444 |||||||||| |||||| ||| |||||||||| |||||| || |||||||||| |||| ||||| ACTGTTCCGG AGCCCAGTCG TTTTGGTACA TAACTTCTTA TGTAGTCTTT TGCTTGTCTA 366 TGGGTATGGC GGGGCCCTGT CCCGTCGAGT TTCACTAATG TACCCTTAGA GGTCTGTGGA 134384 ||||||| || |||||||||| |||||| ||| ||||||| | ||| |||||| ||||||| || TGGGTAT-GC GGGGCCCTGT CCCGTCAAGT TTCACTACTA TACTCTTAGA GGTCTGTAGA 425 CATTATGTGG GTTGTATATA TATGTTTTGG ATAATGGTCT GGACATGGTT TGTTTGGGAT 134324 ||| ||||| |||||||| |||||||| | |||||||||| |||||||||| |||||||||| CATCGTGTGG GTTGTATAAT TATGTTTTTG ATAATGGTCT GGACATGGTT TGTTTGGGAT 485 GTCCGCTTGT ACAGGGGCAG CCTTGTCGGC TGTGTACATC ATTATGCTTT GAATAGTGGC 134264 |||| ||||| ||| | ||| ||||||||| |||||||||| || || || | ||||||| GTCCACTTGT ACAAGTGCAA CCTTGTCGGT TGTGTACATC TTTGTGTATT GTGTAGTGGC 545 GGCCTTGTCG GCTCGCGTAT GCTGTTATG 134235 ||||||||| ||| |||||| ||| ||||| AGCCTTGTCG GCT-GCGTAT GCTATTATG 573 hqPGS_C10HBa0115K16.1-_SGN-E538151+ (135942 135900,134938 134744,134567 134235) ******************************************************************************** EST sequence 146 +strand 644 n (File: SGN-E538156+) 1 GAGAAAACCA GCCATTAAAC TCTTGGACAG CAGCTGCAAA GAAATTGAGT CATTTATCAT 61 TTCACCGAGT CCCGGGCCGG GTAATGTTCG TGCGGAGTTT CTTGCATATG TCACCGAGTC 121 CCTCACTAGA GGGCCGGGAA TGTATATTAT ATATATGATT GGTGATGAGG ATGGTTATGA 181 TGATGATGAT GACGGAGATG ATGTGATGAC TATTTCACTG AGTCCCTCAC TAGAGGGCCG 241 GGTGTAGACG CTCAGTTTGG TGATCCTCCC GCCTAGGATA TCTACTCTGC TGTTTGGGAG 301 AGCTCCACTG TTCCGGAGCC CAGTCGTTGT GGTACATAAC TTCTTATGTA GTCTTTTGCT 361 TGTCTATGGG TATGCGGGGC CCTGTCCCGT CAAGTTTCAC TACTATACTC TTAGAGGTCT 421 GTAGACATCG TGTGGGTTGT ATAATTATGT TTTTGATAAT GGTCTGGACA TGGTTTGTTT 481 GGGATGTCCA CTTGTACAAG TGCAACCTTG TCGGTTGTGT ACATCTTTGT GTATTGTGTA 541 GTGGCAGCCT TGACGGCTGC GTATGCTATT ATGCTTTGAA TAGTGGCAGC CTTGTCGGCT 601 CGCGTATGTT GTTACGGTTG AATGGGTATG ACTCTTTATG AGAT Predicted gene structure (within gDNA segment 135999 to 133273): Exon 1 135942 135900 ( 43 n); cDNA 5 47 ( 43 n); score: 0.837 Intron 1 135899 134939 ( 961 n); Pd: 0.997 (s: 0.84), Pa: 0.963 (s: 1.00) Exon 2 134938 134744 ( 195 n); cDNA 48 241 ( 194 n); score: 0.933 Intron 2 134743 134568 ( 176 n); Pd: 0.000 (s: 0.78), Pa: 0.000 (s: 0.96) Exon 3 134567 134235 ( 333 n); cDNA 242 573 ( 332 n); score: 0.893 MATCH C10HBa0115K16.1- SGN-E538156+ 0.908 571 0.887 C PGS_C10HBa0115K16.1-_SGN-E538156+ (135942 135900,134938 134744,134567 134235) Alignment (genomic DNA sequence = upper lines): AAACCAACCC TGCAACTCTT GGCCAGCAGC TGCAAATAAT TTGGTTAGTA ATCTCCTTGT 135883 |||||| || | ||||||| || ||||||| |||||| || ||| AAACCAGCCA TTAAACTCTT GGACAGCAGC TGCAAAGAAA TTG....... .......... 47 TTGGTGTGTT AATTCTTTAG AATACCCTTG TTAATTATCC ATTAATTTTA AGAAGGGGGC 135823 .......... .......... .......... .......... .......... .......... 47 GTGACCAGTA GCTTAGGAAG TTTGTTTTAG TTATTGAATG TACTAAGTAT GAATGGAAAC 135763 .......... .......... .......... .......... .......... .......... 47 CATAATCGGA TTATTAGTGG TGTCGTGTTG GTGCTTGGGC TGTTTTGACT AAAGCAAACT 135703 .......... .......... .......... .......... .......... .......... 47 GCAGGAAAAT TCTGTTTTGG CATTATGTAT ATGTTGAATG TGATTATGAG TATATACTCC 135643 .......... .......... .......... .......... .......... .......... 47 AAAGGATGAA TACGATAAGG TAGATGTGTT ACGAATTATA AAACGAGTTA TCACTCGGTG 135583 .......... .......... .......... .......... .......... .......... 47 TGTCGTTGCT TCGCTGATAT AGTTGCCGAG ATGGAACTGT TTTGGGGAGG GGGCTGTTTA 135523 .......... .......... .......... .......... .......... .......... 47 ATATGATTCT TTGGGTTATA TGTGTTATTG GTATTGTTGT GGATAATTTG GATTGTTGTC 135463 .......... .......... .......... .......... .......... .......... 47 GGATTGGGAC GAAGTAAGGA AAATAGGGGA GGTGCTGCCG AATTTTCGTT AGATTATTAG 135403 .......... .......... .......... .......... .......... .......... 47 CTAGCTTACA AGAAAGTAAA GCACGATGTT TATCTAATTG CGGCACGATT GTTGCTTGTT 135343 .......... .......... .......... .......... .......... .......... 47 ATAGATTAAT AGCTTGAGCA GTAAATATTG GACGTGCGGC TCGATTATAC GGTATGTAAC 135283 .......... .......... .......... .......... .......... .......... 47 GCTGTCCCTT CTTTCTTTGC TTGGCATGAC TTTTAAAAAT AAGCGAATAA CGGACAGATT 135223 .......... .......... .......... .......... .......... .......... 47 TGATACTTAC CTCTAAAGCG TCTAGGTGAT GTATATTCTT GCTTCCACAA TTATTCCTCT 135163 .......... .......... .......... .......... .......... .......... 47 ATATATCGGT TATGTCTAAG GCTATGATGA TCTCTAATAT CTATGGTAAT GCTTCTTAGA 135103 .......... .......... .......... .......... .......... .......... 47 GTCATTGAAA TTTTACGTTT TCATATCGTA TTAAAGGTTC ATAATCTTGA TAAAATATTA 135043 .......... .......... .......... .......... .......... .......... 47 ATCTTTGGTA ATACTCTTTG CTGGTTCACG TTGATTGTTC TATTGAGTTA TAAGAAATGA 134983 .......... .......... .......... .......... .......... .......... 47 TTTTAATTGC ATATGGTTGC TCACAATATT CTGCTCGTGC ATAGAGTCAT TTATCATTTC 134923 |||||| |||||||||| .......... .......... .......... .......... ....AGTCAT TTATCATTTC 63 ACCGAGTCCC GGGCCGGGTA ATGTTCGTGC GGAGTTTCTT GCATATGTCA CCGAGTTCCT 134863 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||| ||| ACCGAGTCCC GGGCCGGGTA ATGTTCGTGC GGAGTTTCTT GCATATGTCA CCGAGTCCCT 123 CACTAGAGGG CCGGGTATGT ATATTATATA TATGATTGGT GATGAGGATG GTTATGATGA 134803 |||||||||| ||||| |||| |||||||||| |||||||||| |||||||||| |||||||||| CACTAGAGGG CCGGGAATGT ATATTATATA TATGATTGGT GATGAGGATG GTTATGATGA 183 TGATGATGAC GGAGATGACG TGATGATTAT TTTGCCGAGC CCCTTACTAG GGAAGCTGGG 134743 |||||||||| |||||||| | |||||| ||| || | ||| |||| ||||| | || || TGATGATGAC GGAGATGATG TGATGACTAT TTCACTGAGT CCCTCACTAG AG-GGCCGG. 241 CACCTTAAAT GTTAAATATA TGCATGATTT TCACTTAAAA AGTATATGTG TAGCGATATT 134683 .......... .......... .......... .......... .......... .......... 241 TTGTTTCGAG TTGCCACATT GGTATCCTGT CATCTTTACC TTATGCTTTA CATACTCAGT 134623 .......... .......... .......... .......... .......... .......... 241 ACATTGTCCG TACTGACCCC CCCTTTCCTC GGGGGGCTGC GTTTCATGCC CGCAGGTGTA 134563 ||||| .......... .......... .......... .......... .......... .....GTGTA 246 GACGCGCAGT TCGGTGATCC TCCCGCCTAG GATATCTACT CTGCTGATTG GGAGAGCTCC 134503 ||||| |||| | |||||||| |||||||||| |||||||||| |||||| ||| |||||||||| GACGCTCAGT TTGGTGATCC TCCCGCCTAG GATATCTACT CTGCTGTTTG GGAGAGCTCC 306 ACTGTTCCGG AGCCCATTCG TTTTGGTACA TAACTT-TTG TGTAGTCTTT TGCTCGTCTA 134444 |||||||||| |||||| ||| || ||||||| |||||| || |||||||||| |||| ||||| ACTGTTCCGG AGCCCAGTCG TTGTGGTACA TAACTTCTTA TGTAGTCTTT TGCTTGTCTA 366 TGGGTATGGC GGGGCCCTGT CCCGTCGAGT TTCACTAATG TACCCTTAGA GGTCTGTGGA 134384 ||||||| || |||||||||| |||||| ||| ||||||| | ||| |||||| ||||||| || TGGGTAT-GC GGGGCCCTGT CCCGTCAAGT TTCACTACTA TACTCTTAGA GGTCTGTAGA 425 CATTATGTGG GTTGTATATA TATGTTTTGG ATAATGGTCT GGACATGGTT TGTTTGGGAT 134324 ||| ||||| |||||||| |||||||| | |||||||||| |||||||||| |||||||||| CATCGTGTGG GTTGTATAAT TATGTTTTTG ATAATGGTCT GGACATGGTT TGTTTGGGAT 485 GTCCGCTTGT ACAGGGGCAG CCTTGTCGGC TGTGTACATC ATTATGCTTT GAATAGTGGC 134264 |||| ||||| ||| | ||| ||||||||| |||||||||| || || || | ||||||| GTCCACTTGT ACAAGTGCAA CCTTGTCGGT TGTGTACATC TTTGTGTATT GTGTAGTGGC 545 GGCCTTGTCG GCTCGCGTAT GCTGTTATG 134235 |||||| || ||| |||||| ||| ||||| AGCCTTGACG GCT-GCGTAT GCTATTATG 573 hqPGS_C10HBa0115K16.1-_SGN-E538156+ (135942 135900,134938 134744,134567 134235) ******************************************************************************** EST sequence 70 -strand 843 n (File: SGN-E544254-) 1 GAGTCATTTA TCATTTCACC GAGTCCCGGG CCGGGTAATG TTCGTGCGGA GTTTCTTGCA 61 TATGTCACCG AGTCCCTCAC TAGAGGGCCG GGAATGTATA TTATATATAT GATTGGTGAT 121 GAGGATGGTT ATGATGATGA TGATGACGGA GATGATGTGA TGACTATTTC ACCGAGTCCC 181 TCACTAGAGG GCCGGGTACT ATGATGTATA TATAATGATG ATTATTTTGC CGAGTCCCTT 241 ACTAGGGAAG TTAGGCATCT TATATGTTAA AGATATGCAT GATTTTCACT TAAAAAGTAC 301 ATGTGTAGAG ATATCTTGTT TCGACTTATC ATGTTGGTAT CCTGTCATCT TTACCTTATG 361 CTTTACATAC TCAGTACATT GTCCGTACTG ACCCCCTTTT CTCGGGGGGC TGCGTTTCAT 421 GCCCGCAGGT GTAGACGCTC AGTTCGGTGA TCCTCCCGCC TAGGATATCT ACTCTGCTTT 481 TTGGGAGAGC TCCACTGTTC CGGAGCCCAG TCGTTTTGGT ACATAACTTC TTATGTAGTC 541 TTTTGCTTGT CTATGGGTAT GGCGGGGCCC TGTCCCGTCA AGTTTCACTA CTATACTCTT 601 AGAGGTCTGT AGACATCGTG TGGGTTGTAT AATTATGTTT TGGATAATGG TCTGGACATG 661 GTTTGTTTGG GATGTCCATT TGTACAAGTG CAGCCTTGTC GGTTGTGAAC ATCATTGTGT 721 ATTGTGTAGT GGCAGCCTCG TCGGCTGCGT ATGCTATTAT GTTTTGGATA GTGGCGGCCT 781 TGTCGGCTCG CATATGTTGT TACGATTTAA TGGTTATGAC TCTTTATGAG AAAAAAAAAG 841 AAA Predicted gene structure (within gDNA segment 135549 to 132060): Exon 1 134883 134829 ( 55 n); cDNA 161 214 ( 54 n); score: 0.818 Intron 1 134828 134784 ( 45 n); Pd: 0.000 (s: 0.84), Pa: 0.000 (s: 0.88) Exon 2 134783 134235 ( 549 n); cDNA 215 761 ( 547 n); score: 0.908 PPA cDNA 829 839 MATCH C10HBa0115K16.1- SGN-E544254- 0.900 604 0.716 C PGS_C10HBa0115K16.1-_SGN-E544254- (134883 134829,134783 134235) Alignment (genomic DNA sequence = upper lines): TGCATATGTC ACCGAGTTCC TCACTAGAGG GCCGGGTATG TATATTATAT ATATGATTGG 134824 || ||| || ||||||| || |||||||||| |||||||| ||| | ||| |||| TGACTATTTC ACCGAGTCCC TCACTAGAGG GCCGGGTA-C TATGATGTAT ATATA..... 214 TGATGAGGAT GGTTATGATG ATGATGATGA CGGAGATGAC GTGATGATTA TTTTGCCGAG 134764 ||||||||| |||||||||| .......... .......... .......... .......... ATGATGATTA TTTTGCCGAG 234 CCCCTTACTA GGGAAGCTGG GCACCTTAAA TGTTAAATAT ATGCATGATT TTCACTTAAA 134704 ||||||||| |||||| | | ||| |||| | ||||||| || |||||||||| |||||||||| TCCCTTACTA GGGAAGTTAG GCATCTTATA TGTTAAAGAT ATGCATGATT TTCACTTAAA 294 AAGTATATGT GTAGCGATAT TTTGTTTCGA GTTGCCACAT TGGTATCCTG TCATCTTTAC 134644 ||||| |||| |||| ||||| ||||||||| || || | |||||||||| |||||||||| AAGTACATGT GTAGAGATAT CTTGTTTCGA CTTATCATGT TGGTATCCTG TCATCTTTAC 354 CTTATGCTTT ACATACTCAG TACATTGTCC GTACTGACCC CCCCTTTCCT CGGGGGGCTG 134584 |||||||||| |||||||||| |||||||||| ||||||| | ||||||| || |||||||||| CTTATGCTTT ACATACTCAG TACATTGTCC GTACTGA--C CCCCTTTTCT CGGGGGGCTG 412 CGTTTCATGC CCGCAGGTGT AGACGCGCAG TTCGGTGATC CTCCCGCCTA GGATATCTAC 134524 |||||||||| |||||||||| |||||| ||| |||||||||| |||||||||| |||||||||| CGTTTCATGC CCGCAGGTGT AGACGCTCAG TTCGGTGATC CTCCCGCCTA GGATATCTAC 472 TCTGCTGATT GGGAGAGCTC CACTGTTCCG GAGCCCATTC GTTTTGGTAC ATAACTT-TT 134465 |||||| || |||||||||| |||||||||| ||||||| || |||||||||| ||||||| || TCTGCTTTTT GGGAGAGCTC CACTGTTCCG GAGCCCAGTC GTTTTGGTAC ATAACTTCTT 532 GTGTAGTCTT TTGCTCGTCT ATGGGTATGG CGGGGCCCTG TCCCGTCGAG TTTCACTAAT 134405 ||||||||| ||||| |||| |||||||||| |||||||||| ||||||| || |||||||| | ATGTAGTCTT TTGCTTGTCT ATGGGTATGG CGGGGCCCTG TCCCGTCAAG TTTCACTACT 592 GTACCCTTAG AGGTCTGTGG ACATTATGTG GGTTGTATAT ATATGTTTTG GATAATGGTC 134345 ||| ||||| |||||||| | |||| |||| ||||||||| ||||||||| |||||||||| ATACTCTTAG AGGTCTGTAG ACATCGTGTG GGTTGTATAA TTATGTTTTG GATAATGGTC 652 TGGACATGGT TTGTTTGGGA TGTCCGCTTG TACAGGGGCA GCCTTGTCGG CTGTGTACAT 134285 |||||||||| |||||||||| ||||| ||| |||| | ||| |||||||||| |||| |||| TGGACATGGT TTGTTTGGGA TGTCCATTTG TACAAGTGCA GCCTTGTCGG TTGTGAACAT 712 CATTATGCTT TGAATAGTGG CGGCCTTGTC GGCTCGCGTA TGCTGTTATG 134235 |||| || | || |||||| | |||| ||| |||| ||||| |||| ||||| CATTGTGTAT TGTGTAGTGG CAGCCTCGTC GGCT-GCGTA TGCTATTATG 761 hqPGS_C10HBa0115K16.1-_SGN-E544254- (134883 134829,134783 134235) ******************************************************************************** EST sequence 212 +strand 470 n (File: SGN-E268096+) 1 GAAAACCAGC CATTAAACTC TTGGACAGCA GCTGCAAAGA AATTGAGTCA TTTATCATTG 61 CACCGAGTCC CGGGCCGGGT AATGTTCGTG CGGAGTTTCT TGCATATGTC ACCGAGTCCC 121 TCACTAGAGG GCCGGGAATG TATATTATAT ATATGATTGG TGATGAGGAT GGTTATGATG 181 ATGATGATGA CGGAGATGAT GTGATGACTA TTTCACTGAG TCCCTCACTA GAGGGCCGGG 241 TGTAGACGCT CAGTTTGGTG ATCCTCCCGC CTAGGATATC TACTCTGCTG TTTGGGAGAG 301 CTCCACTGTT CCGGAGCCCA GTCGTTTTGG TACATAACTT CTTATGTAGT CTTTTGCTTG 361 TCTATGGGTA TGCGGGGCCC TGTCCCGTCA AGTTTCACTA CTATACTCTT AGAGGTCTGT 421 AGACATCGTG TGGGTAGTAT AATTATGTTT TTGATAATGG GCTGGACATG Predicted gene structure (within gDNA segment 136123 to 132557): Exon 1 135942 135900 ( 43 n); cDNA 3 45 ( 43 n); score: 0.837 Intron 1 135899 134939 ( 961 n); Pd: 0.997 (s: 0.84), Pa: 0.963 (s: 0.98) Exon 2 134938 134744 ( 195 n); cDNA 46 239 ( 194 n); score: 0.928 Intron 2 134743 134568 ( 176 n); Pd: 0.000 (s: 0.78), Pa: 0.000 (s: 0.96) Exon 3 134567 134337 ( 231 n); cDNA 240 470 ( 231 n); score: 0.907 MATCH C10HBa0115K16.1- SGN-E268096+ 0.917 469 0.998 C PGS_C10HBa0115K16.1-_SGN-E268096+ (135942 135900,134938 134744,134567 134337) Alignment (genomic DNA sequence = upper lines): AAACCAACCC TGCAACTCTT GGCCAGCAGC TGCAAATAAT TTGGTTAGTA ATCTCCTTGT 135883 |||||| || | ||||||| || ||||||| |||||| || ||| AAACCAGCCA TTAAACTCTT GGACAGCAGC TGCAAAGAAA TTG....... .......... 45 TTGGTGTGTT AATTCTTTAG AATACCCTTG TTAATTATCC ATTAATTTTA AGAAGGGGGC 135823 .......... .......... .......... .......... .......... .......... 45 GTGACCAGTA GCTTAGGAAG TTTGTTTTAG TTATTGAATG TACTAAGTAT GAATGGAAAC 135763 .......... .......... .......... .......... .......... .......... 45 CATAATCGGA TTATTAGTGG TGTCGTGTTG GTGCTTGGGC TGTTTTGACT AAAGCAAACT 135703 .......... .......... .......... .......... .......... .......... 45 GCAGGAAAAT TCTGTTTTGG CATTATGTAT ATGTTGAATG TGATTATGAG TATATACTCC 135643 .......... .......... .......... .......... .......... .......... 45 AAAGGATGAA TACGATAAGG TAGATGTGTT ACGAATTATA AAACGAGTTA TCACTCGGTG 135583 .......... .......... .......... .......... .......... .......... 45 TGTCGTTGCT TCGCTGATAT AGTTGCCGAG ATGGAACTGT TTTGGGGAGG GGGCTGTTTA 135523 .......... .......... .......... .......... .......... .......... 45 ATATGATTCT TTGGGTTATA TGTGTTATTG GTATTGTTGT GGATAATTTG GATTGTTGTC 135463 .......... .......... .......... .......... .......... .......... 45 GGATTGGGAC GAAGTAAGGA AAATAGGGGA GGTGCTGCCG AATTTTCGTT AGATTATTAG 135403 .......... .......... .......... .......... .......... .......... 45 CTAGCTTACA AGAAAGTAAA GCACGATGTT TATCTAATTG CGGCACGATT GTTGCTTGTT 135343 .......... .......... .......... .......... .......... .......... 45 ATAGATTAAT AGCTTGAGCA GTAAATATTG GACGTGCGGC TCGATTATAC GGTATGTAAC 135283 .......... .......... .......... .......... .......... .......... 45 GCTGTCCCTT CTTTCTTTGC TTGGCATGAC TTTTAAAAAT AAGCGAATAA CGGACAGATT 135223 .......... .......... .......... .......... .......... .......... 45 TGATACTTAC CTCTAAAGCG TCTAGGTGAT GTATATTCTT GCTTCCACAA TTATTCCTCT 135163 .......... .......... .......... .......... .......... .......... 45 ATATATCGGT TATGTCTAAG GCTATGATGA TCTCTAATAT CTATGGTAAT GCTTCTTAGA 135103 .......... .......... .......... .......... .......... .......... 45 GTCATTGAAA TTTTACGTTT TCATATCGTA TTAAAGGTTC ATAATCTTGA TAAAATATTA 135043 .......... .......... .......... .......... .......... .......... 45 ATCTTTGGTA ATACTCTTTG CTGGTTCACG TTGATTGTTC TATTGAGTTA TAAGAAATGA 134983 .......... .......... .......... .......... .......... .......... 45 TTTTAATTGC ATATGGTTGC TCACAATATT CTGCTCGTGC ATAGAGTCAT TTATCATTTC 134923 |||||| |||||||| | .......... .......... .......... .......... ....AGTCAT TTATCATTGC 61 ACCGAGTCCC GGGCCGGGTA ATGTTCGTGC GGAGTTTCTT GCATATGTCA CCGAGTTCCT 134863 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||| ||| ACCGAGTCCC GGGCCGGGTA ATGTTCGTGC GGAGTTTCTT GCATATGTCA CCGAGTCCCT 121 CACTAGAGGG CCGGGTATGT ATATTATATA TATGATTGGT GATGAGGATG GTTATGATGA 134803 |||||||||| ||||| |||| |||||||||| |||||||||| |||||||||| |||||||||| CACTAGAGGG CCGGGAATGT ATATTATATA TATGATTGGT GATGAGGATG GTTATGATGA 181 TGATGATGAC GGAGATGACG TGATGATTAT TTTGCCGAGC CCCTTACTAG GGAAGCTGGG 134743 |||||||||| |||||||| | |||||| ||| || | ||| |||| ||||| | || || TGATGATGAC GGAGATGATG TGATGACTAT TTCACTGAGT CCCTCACTAG AG-GGCCGG. 239 CACCTTAAAT GTTAAATATA TGCATGATTT TCACTTAAAA AGTATATGTG TAGCGATATT 134683 .......... .......... .......... .......... .......... .......... 239 TTGTTTCGAG TTGCCACATT GGTATCCTGT CATCTTTACC TTATGCTTTA CATACTCAGT 134623 .......... .......... .......... .......... .......... .......... 239 ACATTGTCCG TACTGACCCC CCCTTTCCTC GGGGGGCTGC GTTTCATGCC CGCAGGTGTA 134563 ||||| .......... .......... .......... .......... .......... .....GTGTA 244 GACGCGCAGT TCGGTGATCC TCCCGCCTAG GATATCTACT CTGCTGATTG GGAGAGCTCC 134503 ||||| |||| | |||||||| |||||||||| |||||||||| |||||| ||| |||||||||| GACGCTCAGT TTGGTGATCC TCCCGCCTAG GATATCTACT CTGCTGTTTG GGAGAGCTCC 304 ACTGTTCCGG AGCCCATTCG TTTTGGTACA TAACTT-TTG TGTAGTCTTT TGCTCGTCTA 134444 |||||||||| |||||| ||| |||||||||| |||||| || |||||||||| |||| ||||| ACTGTTCCGG AGCCCAGTCG TTTTGGTACA TAACTTCTTA TGTAGTCTTT TGCTTGTCTA 364 TGGGTATGGC GGGGCCCTGT CCCGTCGAGT TTCACTAATG TACCCTTAGA GGTCTGTGGA 134384 ||||||| || |||||||||| |||||| ||| ||||||| | ||| |||||| ||||||| || TGGGTAT-GC GGGGCCCTGT CCCGTCAAGT TTCACTACTA TACTCTTAGA GGTCTGTAGA 423 CATTATGTGG GTTGTATATA TATGTTTTGG ATAATGGTCT GGACATG 134337 ||| ||||| || ||||| |||||||| | ||||||| || ||||||| CATCGTGTGG GTAGTATAAT TATGTTTTTG ATAATGGGCT GGACATG 470 hqPGS_C10HBa0115K16.1-_SGN-E268096+ (135942 135900,134938 134744,134567 134337) ******************************************************************************** EST sequence 20 -strand 573 n (File: SGN-E538150-) 1 CTGCGTATGC TATTATGCTT TGAATAGTGG CAGCCTTGTC GGCTCGCGTA TGTTGTTACG 61 GTTGAATGGT TATGACTCTT TATGAGATAG ATCCACTTTA TATATATATA TATGGTGTTG 121 GGTTTGGCTT GAAAAAAAAA AAAAAAAAAA AACTCTTGAT ACAGTATTGG TTGGAAATTC 181 CCAAAGAGTT GCAGGTGCAG ATTATGCATT AGAAAGTATC CACAACATCA GGGAAGCAAT 241 ACCACAACTT TGGGAAGTAG ACAGGCTGGC TGAAGTTAAC TACTCTGGTG TAGCTGTTGA 301 GACATCTGTC ACAGCTTAGA ATCAGTAGTA CTACTATATC TCATCATCAT GCTGATGGCA 361 GAAGGAAAAA AAAATTAATC AAGAATCATG AGAAGATCCA AAATTTTCTG TCAAATTTGA 421 TTTTAAATGA TGTTGATGTT TTGTTGTCAT CAATTAATAA CTAGCTTTTA GTATTTCCTT 481 TCCATCCACA AATCTTGTAA ATAAATTCTA TATTTATCAG TCTACCTTTC TATGATTATA 541 TAATAATGAA GTTCAATTAT TAAAAAAAAA AAA Predicted gene structure (within gDNA segment 135003 to 128667): Exon 1 134294 134164 ( 131 n); cDNA 1 132 ( 132 n); score: 0.866 Intron 1 134163 130732 (3432 n); Pd: 0.000 (s: 0.83), Pa: 0.863 (s: 0.48) Exon 2 130731 130677 ( 55 n); cDNA 133 188 ( 56 n); score: 0.518 PPA cDNA 562 573 MATCH C10HBa0115K16.1- SGN-E538150- 0.763 186 0.325 C PGS_C10HBa0115K16.1-_SGN-E538150- (134294 134164,130731 130677) Alignment (genomic DNA sequence = upper lines): CTGTGTACAT CATTATGCTT TGAATAGTGG CGGCCTTGTC GGCTCGCGTA TGCTGTTATG 134235 ||| ||| ||||||||| |||||||||| | |||||||| |||||||||| || ||||| | CTGCGTATGC TATTATGCTT TGAATAGTGG CAGCCTTGTC GGCTCGCGTA TGTTGTTACG 60 GTTGAATGGT TATGACTCCT TATGAGACAG GTCCTCT-TA TATATATATA TATGACGTTG 134176 |||||||||| |||||||| | ||||||| || ||| || || |||||||||| |||| |||| GTTGAATGGT TATGACTCTT TATGAGATAG ATCCACTTTA TATATATATA TATGGTGTTG 120 GGGTTGGCTT GATTTGATTA AATTCCATAT TGTCTTAGTT TCAGTTGGTC ATACTTAGCA 134116 || ||||||| || GGTTTGGCTT GA........ .......... .......... .......... .......... 132 GGTTTGTATG TCGGTGTCCA AAACGGGCAC TAATCACGGC CTATCGGGTT GGGTCGTGAC 134056 .......... .......... .......... .......... .......... .......... 132 AAAGAGTGGT ATCAGAGCGG TTCTTCCTCG GAAGTGTCTA CAGACCGTGT CTAGTAGAGT 133996 .......... .......... .......... .......... .......... .......... 132 CTTGTTTATC GGTGTGTTGT GCACCACATC TATAAACAGG AAGCTACAGG ACATTTATGA 133936 .......... .......... .......... .......... .......... .......... 132 TGTCATTCTT TCTTCTTATT CTAGATCGTG CGATAGAGCG ATATTAACAG GATAATCCCT 133876 .......... .......... .......... .......... .......... .......... 132 CTCTAACGAA TCCATGTGTT TTCAGCTATG CCTCCAAAGA AAGCGACAGC CGCCCAGAAG 133816 .......... .......... .......... .......... .......... .......... 132 GGAAAATCGG TAGCAGAAGG TACTAGTCAG ACCCGAAGAG TTACTAGGGC CCGTGCCCAG 133756 .......... .......... .......... .......... .......... .......... 132 TCTATGCCTG GTATTATGCT CCAGTCGGAG AGCTCTGCTA CACCCCCACC GCCAGAAGAG 133696 .......... .......... .......... .......... .......... .......... 132 CTTAGAGCAG CAGCAGCTCC AGTTCGGGGG ACACCACCAG CCCCCGAGGC CCCAACATCT 133636 .......... .......... .......... .......... .......... .......... 132 GAACCTCCAG CTCCTCAGTC AGGGGCGGAG GATAGGGCCA TGAGAGATGC GGTTCAATTG 133576 .......... .......... .......... .......... .......... .......... 132 CTGACTAGAT TAGTGGCAGA TCAGGCTCGC AGGCATGGAC GAGGAGTTGA TCATGTGGAC 133516 .......... .......... .......... .......... .......... .......... 132 AGATCTGATA GCTTAAGGGC TCGTGACTTC TTAAGTTGTA ATCCTCCAGA GTTCTTTGGG 133456 .......... .......... .......... .......... .......... .......... 132 TCAAGGCCAC AGGATGATCC GCAAGAGTTT ATTCGTCAGA TGCAGCGTAC ATTGAGGATA 133396 .......... .......... .......... .......... .......... .......... 132 ATCAAGGCTT CGGAGACCGA GTCTGTTGAG TTGGCTACGT ATCGTTTGCG GGATGTAGCT 133336 .......... .......... .......... .......... .......... .......... 132 ATTAATTGGT ATGAGTCTTG GGAGTTATCT AGGGGTGAGG GTGCCCCTCC AGCGGTATGG 133276 .......... .......... .......... .......... .......... .......... 132 GATGAATTTG TGGAGGCCTT TCCAGGGCCA CTTCCTGCCT CCAGAGATGA AGCGAGCTAG 133216 .......... .......... .......... .......... .......... .......... 132 AGTCGATAAA TTCTTGCGTT TGAAGCAAAA TGGCAGGAGC GTTCAAGAGT ATAGCCTCGA 133156 .......... .......... .......... .......... .......... .......... 132 GTTTGATTCA TTGGCTAGGC ATGCGCCTAC TATTGTGGCT GATATGGCAG ATAGGGTACA 133096 .......... .......... .......... .......... .......... .......... 132 TCGTTATGTG ATGGGATTGG ATCGTTATCT GATTGACGGT TGTATGGCAG TGACTCTTCA 133036 .......... .......... .......... .......... .......... .......... 132 GCCAGGTATG GACATTGCTC GGGTGCAGGC ATATGCACAG GGGGTAGAGG ATCGGCACCG 132976 .......... .......... .......... .......... .......... .......... 132 GGGACGTCAG CCAGATAGAG ATTATAATAG AGGCCAGCAT AAGAGGGCTA GATCAGCAGG 132916 .......... .......... .......... .......... .......... .......... 132 TTATCCTGAC GAGTTTCAAA GCAAGGCAGT CTCAGCAGCA TGTTAGATTT TCTTCCCAGC 132856 .......... .......... .......... .......... .......... .......... 132 CAGCACAGAG TGCACCCCCA CGTTTCATGG GTAGGGGGTT CGATCGTATG GGATATTCAG 132796 .......... .......... .......... .......... .......... .......... 132 AACCTGGTCA GAGCTCTAGG GCGTCAGGGT CACAGATGGG CAGGGGTTTG AGCCAGTCGA 132736 .......... .......... .......... .......... .......... .......... 132 GGCCACCTTT GCCTCGGTGT TCTCGTTGTG GTAAGTCCCA TCCTGGGGAA TGTCGTTGGG 132676 .......... .......... .......... .......... .......... .......... 132 CTACAGGTGC GTGTTTTTCT TGCGGACGTC AGGGCCATAC TATGAGGGAG TGTCACCTTA 132616 .......... .......... .......... .......... .......... .......... 132 GAGGTAGTGC AGGTGGTATG ACACAGCCTA CAGGGTCCAT TGCTGGTTCA TCTTCTTCTG 132556 .......... .......... .......... .......... .......... .......... 132 TGGCTATGCG CCCTACGGGG CAGGGTATTC AGGCACCAGC AGGCCGTGGT AGAGGACGTG 132496 .......... .......... .......... .......... .......... .......... 132 GTGGAGCTTC CAGTTCTAGC GGTCCCTCAA ACCGTATATA TGCTTTGACT AATAGGCAAG 132436 .......... .......... .......... .......... .......... .......... 132 ATCAAGAGGC GTCACCTAAT GTGATCACAG GTATATTATC ACTATTCTCC CGAAGTGTGT 132376 .......... .......... .......... .......... .......... .......... 132 ATGCATTGAT AGACCCAGGT TCCACCTTAT CATATATATC TCCCTTTGTT GCTAGTAGGA 132316 .......... .......... .......... .......... .......... .......... 132 TCGGAATAGA GTCTGAGTTG ATAGAACCAT TTGAGGTAGC TACACCTGTA GGAGATTTTG 132256 .......... .......... .......... .......... .......... .......... 132 TCATAGCTAC GCGAGTATAT AGGAATTGTT CAGTAGCTAT ATATAGTCGT CTTACCGTAG 132196 .......... .......... .......... .......... .......... .......... 132 CAGATCTAAT AGAGTTAAAT ATGATTGAGT TTGATATTAT TATAGGCATG GATTGGTTGG 132136 .......... .......... .......... .......... .......... .......... 132 CTGCTTGTTA TGCTAATGTT GATTGTAGAG GAAAGATAGT TCGATTTCAA TTTCCAGGGG 132076 .......... .......... .......... .......... .......... .......... 132 AACCGATTAT AGAGTGGAAG GGAAGTACAG TATCGCCGAA AGGTAAGTTC ATTTCATACC 132016 .......... .......... .......... .......... .......... .......... 132 TCAAGGCCGG GAAGATGGTT AGAAAAGGCT ATATTTACCA TCTGATTCGG GTGCATGACA 131956 .......... .......... .......... .......... .......... .......... 132 TAAAGGCAGA GGCACCGACT CTTCAATCAG TCCCGGTAGT TAATGAATTT CCTGATGTAT 131896 .......... .......... .......... .......... .......... .......... 132 TCCCCGAGGA ACTTCCAGGC CTTCCTCCAG AACGGGAGAT AGAGTTTACT ATAGATGTAC 131836 .......... .......... .......... .......... .......... .......... 132 TGCCAGATAC CCAGCCTATA TCTATACCTC CTTTTAGAAT GGCACCTGCT GAGTTGAAAG 131776 .......... .......... .......... .......... .......... .......... 132 AATTGAAAGA GCAATTGAGG GATTTGCTAG AAAAGGGCTT CATCAGGCCT AGTACGTCAC 131716 .......... .......... .......... .......... .......... .......... 132 CTTGGGGAGC ACCAGTACTG TTTGTGAGGA AGAAGGATGG GTCGCTGCGG ATGTGCATTG 131656 .......... .......... .......... .......... .......... .......... 132 ATTATAGGCA GTTGAACAAA GTAACAATAA AGAACAGGTA TCCCCTCCCA AGGATTGACG 131596 .......... .......... .......... .......... .......... .......... 132 ATCTATTTGA CCAGTTGCAG GGTGCAAAGT GTTTTTCAAA GATAGACTTG CGGTCAGGTT 131536 .......... .......... .......... .......... .......... .......... 132 ATCATCAGGT GCGGGTAAGG GAGGCAGATA TTCCAAAGAC AGCATTCCGG ACCCGATATG 131476 .......... .......... .......... .......... .......... .......... 132 GGCATTATGA GTTTAGAGTG CTGTCTTTTG GGCTGACTAA TGCTCCAGCG GTATTCATGG 131416 .......... .......... .......... .......... .......... .......... 132 ATTTAATGAA TCGAGTATTT AAACCATTCC TTGATATGTT TGTTATTGTA TTTATAGACG 131356 .......... .......... .......... .......... .......... .......... 132 ATATTCTGGT CTATTCACGT TCAGAAGAGG AGCATGCAGA TCATTTAAGG ACGGTACTTA 131296 .......... .......... .......... .......... .......... .......... 132 GGGTGCTTCA GCACCAGAAG TTGTATGCTA AATTTTCTAA GTGCGAGTTC TGGTTGACTT 131236 .......... .......... .......... .......... .......... .......... 132 CAGTGGCATT CTTGGGGCAT ATTATTGGAG CTGATGGTAT TCGGGTAGAT ACGCAGAAGA 131176 .......... .......... .......... .......... .......... .......... 132 TTGAGGCAGT AAAGACTTGG CCCAGACCTA CGACACCTAC TGAGGTACAC AGCTTTTTGG 131116 .......... .......... .......... .......... .......... .......... 132 GGTTAGCAGG ATATTACAGG AGATTCGTAG AAAAGTTTGC CTCAATTTCA GTGCCTTTGA 131056 .......... .......... .......... .......... .......... .......... 132 CAAGGCTAAC TCAAAAGGCA GCCAAGTTCC AGTGGACAGA TGCTTGTGAG CGAAGCTTCC 130996 .......... .......... .......... .......... .......... .......... 132 AGCTATTAAA AGACAAATTG ACTACAGCTC CAGTCCTAAC TCTTCTAGAG GGGCCAGACG 130936 .......... .......... .......... .......... .......... .......... 132 GCTATGTTAT TTATTGTGAT GCTTCGGGTG TTGGGCTAGG ATGTGTATTG ATGCAGCATG 130876 .......... .......... .......... .......... .......... .......... 132 GCAAAGTTAT AGCCTATGCC TCCCGACAAC TTAGGAAGCA TGAAAAGAAC TATCCTACTC 130816 .......... .......... .......... .......... .......... .......... 132 ACGATCTGGA GTTAGCGGTC GTGGTTCATG CCTTGAAGAT ATGGAGACAT TATTTATATG 130756 .......... .......... .......... .......... .......... .......... 132 GTGTCCATGT GGACATCTAT ACAGATCATA AGAGTCTCCA ATATATCTTT AAACAGAAGG 130696 | | | | | | | | |||| | |||| | .......... .......... ....AAAAAA AAAAAAAAAA AAAACTCTTG ATACAGTATT 168 AGCTG-AACT TACGACAGAG 130677 | || || | | | | |||| GGTTGGAAAT TCCCAAAGAG 188 hqPGS_C10HBa0115K16.1-_SGN-E538150- (134294 134164) ******************************************************************************** EST sequence 172 +strand 453 n (File: SGN-E303256+) 1 AACCAGCCAT TAAACTCTTG GACAGCAGCT GCAAAGAAAT TGGTGTAGAC GCTCAGTTCG 61 GTGATCCTCC CGCCTAGGAT ATCTACTCTG CTTTTTGGGA GAGCTCCACT GTTCCGGAGC 121 CCAGTCGTTT TGGTACATAA CTTCTTATGT AGTCTTTTGC TTGTCTATGG GTATGGCGGG 181 GCCCTGTCCC GTCAAGTTTC ACTACTATAC TCTTAGAGGT CTGTAGACAT CGTGTGGGTT 241 GTATAATTAT GTTTTGGATA ATGGTCTGGA CATGGTTTGT TTGGGATGTC CATTTGTACA 301 AGTGCAGCCT TGTCGGTTGT GAACATCATT GTGTATTGTG TAGTGGCAGC CTCGTCGGCT 361 GCGTATGCTA TTATGTTTTG GATAGTGGCG GCCTTGTCGG CTCGCATATG TTGTTACGAT 421 TTAATGGTTA TGACTCTTTA TGAAAAAAAA AAA Predicted gene structure (within gDNA segment 135686 to 132090): Exon 1 134567 134235 ( 333 n); cDNA 43 375 ( 333 n); score: 0.902 PPA cDNA 443 453 MATCH C10HBa0115K16.1- SGN-E303256+ 0.902 333 0.735 C PGS_C10HBa0115K16.1-_SGN-E303256+ (134567 134235) Alignment (genomic DNA sequence = upper lines): GTGTAGACGC GCAGTTCGGT GATCCTCCCG CCTAGGATAT CTACTCTGCT GATTGGGAGA 134508 |||||||||| ||||||||| |||||||||| |||||||||| |||||||||| |||||||| GTGTAGACGC TCAGTTCGGT GATCCTCCCG CCTAGGATAT CTACTCTGCT TTTTGGGAGA 102 GCTCCACTGT TCCGGAGCCC ATTCGTTTTG GTACATAACT T-TTGTGTAG TCTTTTGCTC 134449 |||||||||| |||||||||| | |||||||| |||||||||| | || ||||| ||||||||| GCTCCACTGT TCCGGAGCCC AGTCGTTTTG GTACATAACT TCTTATGTAG TCTTTTGCTT 162 GTCTATGGGT ATGGCGGGGC CCTGTCCCGT CGAGTTTCAC TAATGTACCC TTAGAGGTCT 134389 |||||||||| |||||||||| |||||||||| | |||||||| || | ||| | |||||||||| GTCTATGGGT ATGGCGGGGC CCTGTCCCGT CAAGTTTCAC TACTATACTC TTAGAGGTCT 222 GTGGACATTA TGTGGGTTGT ATATATATGT TTTGGATAAT GGTCTGGACA TGGTTTGTTT 134329 || ||||| |||||||||| ||| ||||| |||||||||| |||||||||| |||||||||| GTAGACATCG TGTGGGTTGT ATAATTATGT TTTGGATAAT GGTCTGGACA TGGTTTGTTT 282 GGGATGTCCG CTTGTACAGG GGCAGCCTTG TCGGCTGTGT ACATCATTAT GCTTTGAATA 134269 ||||||||| ||||||| | ||||||||| |||| |||| |||||||| | | ||| || GGGATGTCCA TTTGTACAAG TGCAGCCTTG TCGGTTGTGA ACATCATTGT GTATTGTGTA 342 GTGGCGGCCT TGTCGGCTCG CGTATGCTGT TATG 134235 ||||| |||| ||||||| | |||||||| | |||| GTGGCAGCCT CGTCGGCT-G CGTATGCTAT TATG 375 hqPGS_C10HBa0115K16.1-_SGN-E303256+ (134567 134235) ******************************************************************************** EST sequence 170 +strand 691 n (File: SGN-E328093+) 1 GAAAACCAGC CATTAAACTC TTGGACAGCA GCTGCAAAGA AATTGGTTAG TAATCTCTTT 61 GCTTGGTTTG TTAATTCCTT AGAATACCTT TGTTAATTAG ACATTTATGT TAAGAAGGGG 121 GACGTGAACA GTATCTTAGG AATTTGTTTT AGTTATTGAA TGTGCTAAGG ATGAGCAGAA 181 ACCATGATCG GATTGCTAGC GGTGTTATAT TTGTGTTGGG CTGTTTTGAT TAAAGTAAGC 241 TGCTGGAAAT TCTGTTTTGG TGTTATGCAT ATGTTAATAT GATTATGGGT ATATACTCCA 301 AAGGATGAAT ACAATAAGGT AGATGTGTTG CGAATTATAA AACGAATTAT CGGTCGGTGT 361 GTCGTTGTTT TGTTACTATG GTTGCTAAAA ACGGAACTGT TTTGGGGGAG GCTGTTTAAT 421 ATGATTTGTT GGATTATATG TGTTGTTGGT ATTGTTGTGG ATAATTTGGG TTGTTGTTGG 481 ATTGGGATGA AGTAAAGAAA ATAGGGGAAG TGCTGCCGGA TTTTCGTTAG ATTATTAGCT 541 AGCTTACATA AGTAGTAAGC GCGACATTTA TCTAATTGCG GCACGATTGG TGCTTGTTAT 601 AGATTTATAC CTTGAGCAGT AAATATTGGA CGTACGGCTC GACTATTCGG TATGTAACGC 661 TATCCTTTCC TTCTTTGTTT GGCATGACCT T Predicted gene structure (within gDNA segment 139133 to 133722): Exon 1 135942 135250 ( 693 n); cDNA 3 691 ( 689 n); score: 0.859 MATCH C10HBa0115K16.1- SGN-E328093+ 0.859 693 1.003 C PGS_C10HBa0115K16.1-_SGN-E328093+ (135942 135250) Alignment (genomic DNA sequence = upper lines): AAACCAACCC TGCAACTCTT GGCCAGCAGC TGCAAATAAT TTGGTTAGTA ATCTCCTTGT 135883 |||||| || | ||||||| || ||||||| |||||| || |||||||||| ||||| ||| AAACCAGCCA TTAAACTCTT GGACAGCAGC TGCAAAGAAA TTGGTTAGTA ATCTCTTTGC 62 TTGGTGTGTT AATTCTTTAG AATACCCTTG TTAATTATCC ATTAATTTTA AGAAGGGGG- 135824 ||||| |||| ||||| |||| |||||| ||| ||||||| | ||| || ||| ||||||||| TTGGTTTGTT AATTCCTTAG AATACCTTTG TTAATTAGAC ATTTATGTTA AGAAGGGGGA 122 CGTGACCAGT AGCTTAGGAA GTTTGTTTTA GTTATTGAAT GTACTAAGTA TGAATGGAAA 135764 ||||| |||| | |||||||| ||||||||| |||||||||| || ||||| | ||| |||| CGTGAACAGT ATCTTAGGAA -TTTGTTTTA GTTATTGAAT GTGCTAAGGA TGAGCAGAAA 181 CCATAATCGG ATTATTAGTG GTGTCGTGTT GGTGCTTGGG CTGTTTTGAC TAAAGCAAAC 135704 |||| ||||| ||| ||| | |||| | || ||| ||||| ||||||||| ||||| || | CCATGATCGG ATTGCTAGCG GTGTTATATT TGTG-TTGGG CTGTTTTGAT TAAAGTAAGC 240 TGCAGGAAAA TTCTGTTTTG GCATTATGTA TATGTTGAAT GTGATTATGA GTATATACTC 135644 ||| || ||| |||||||||| | ||||| | |||||| ||| |||||||| |||||||||| TGCTGG-AAA TTCTGTTTTG GTGTTATGCA TATGTT-AAT ATGATTATGG GTATATACTC 298 CAAAGGATGA ATACGATAAG GTAGATGTGT TACGAATTAT AAAACGAGTT ATCACTCGGT 135584 |||||||||| |||| ||||| |||||||||| | |||||||| ||||||| || ||| ||||| CAAAGGATGA ATACAATAAG GTAGATGTGT TGCGAATTAT AAAACGAATT ATCGGTCGGT 358 GTGTCGTTGC TTCGCTGATA TAGTTGC-CG AGATGGAACT GTTTTGGGGA GGGGGCTGTT 135525 ||||||||| || | | || | ||||| | | |||||| ||||| ||| || ||||||| GTGTCGTTGT TTTGTTACTA TGGTTGCTAA AAACGGAACT GTTTT-GGG- GGAGGCTGTT 416 TAATATGATT CTTTGGGTTA TATGTGTTAT TGGTATTGTT GTGGATAATT TGGATTGTTG 135465 |||||||||| |||| ||| |||||||| | |||||||||| |||||||||| ||| |||||| TAATATGATT TGTTGGATTA TATGTGTTGT TGGTATTGTT GTGGATAATT TGGGTTGTTG 476 TCGGATTGGG ACGAAGTAAG GAAAATAGGG GAGGTGCTGC CGAATTTTCG TTAGATTATT 135405 | |||||||| | ||||||| |||||||||| || ||||||| || ||||||| |||||||||| TTGGATTGGG ATGAAGTAAA GAAAATAGGG GAAGTGCTGC CGGATTTTCG TTAGATTATT 536 AGCTAGCTTA CA-AGAAAGT AAAGCACGAT GTTTATCTAA TTGCGGCACG ATTGTTGCTT 135346 |||||||||| || | ||| |||| ||| ||||||||| |||||||||| |||| ||||| AGCTAGCTTA CATAAGTAGT -AAGCGCGAC ATTTATCTAA TTGCGGCACG ATTGGTGCTT 595 GTTATAGATT AATAGCTTGA GCAGTAAATA TTGGACGTGC GGCTCGATTA TACGGTATGT 135286 |||||||||| ||| ||||| |||||||||| |||||||| | ||||||| || | |||||||| GTTATAGATT TATACCTTGA GCAGTAAATA TTGGACGTAC GGCTCGACTA TTCGGTATGT 655 AACGCTGTCC CTTCTTTCTT TGCTTGGCAT GACTTT 135250 |||||| ||| ||| ||||| || ||||||| ||| || AACGCTATCC TTTCCTTCTT TGTTTGGCAT GACCTT 691 hqPGS_C10HBa0115K16.1-_SGN-E328093+ (135942 135250) ******************************************************************************** EST sequence 249 +strand 455 n (File: SGN-E298250+) 1 AAATGGAGAA ACCAACCCTG CAACTCTTGG CCAGTAGCTG CAAATAATTT GGGGAGTAAT 61 CTCCTTGTTT GGTGTGTTAA TTCTTTAGAA CACCCTTGTT AATTATCCAT TAATTTTAAG 121 AAGGGGGCGT GACCAGTTGC TTACGAAGTT TGTTTTAGTT ATTGAATGTG CTAAGTATGA 181 ATGGAAACCA TAATCGGATT ATTAGTGGTG TCGTGTTGGT GCTTGGGCTG TTTTGATTAA 241 AGCAAACTGC AGGAAAATTC TATTTTGGCA TTATGTATAT GCTGAATGTG ATTATGAGTA 301 TATACTCCAA CGGATGAATA CGATTAGGTA AATGTGTTGC GAATTATAAA ACGAGTTATC 361 GCTCGGTGTG TCGGTGCTTC GCTGCTATAG TTGCCCAGAC GGAACTGTTT TGGGGAGGGG 421 GCTGCCTAAT GTGATACTTC GGGTTATATG TGTTA Predicted gene structure (within gDNA segment 136550 to 133581): Exon 1 135950 135496 ( 455 n); cDNA 1 455 ( 455 n); score: 0.947 MATCH C10HBa0115K16.1- SGN-E298250+ 0.947 455 1.000 C PGS_C10HBa0115K16.1-_SGN-E298250+ (135950 135496) Alignment (genomic DNA sequence = upper lines): AAATGGAGAA ACCAACCCTG CAACTCTTGG CCAGCAGCTG CAAATAATTT GGTTAGTAAT 135891 |||||||||| |||||||||| |||||||||| |||| ||||| |||||||||| || |||||| AAATGGAGAA ACCAACCCTG CAACTCTTGG CCAGTAGCTG CAAATAATTT GGGGAGTAAT 60 CTCCTTGTTT GGTGTGTTAA TTCTTTAGAA TACCCTTGTT AATTATCCAT TAATTTTAAG 135831 |||||||||| |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| CTCCTTGTTT GGTGTGTTAA TTCTTTAGAA CACCCTTGTT AATTATCCAT TAATTTTAAG 120 AAGGGGGCGT GACCAGTAGC TTAGGAAGTT TGTTTTAGTT ATTGAATGTA CTAAGTATGA 135771 |||||||||| ||||||| || ||| |||||| |||||||||| ||||||||| |||||||||| AAGGGGGCGT GACCAGTTGC TTACGAAGTT TGTTTTAGTT ATTGAATGTG CTAAGTATGA 180 ATGGAAACCA TAATCGGATT ATTAGTGGTG TCGTGTTGGT GCTTGGGCTG TTTTGACTAA 135711 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||| ||| ATGGAAACCA TAATCGGATT ATTAGTGGTG TCGTGTTGGT GCTTGGGCTG TTTTGATTAA 240 AGCAAACTGC AGGAAAATTC TGTTTTGGCA TTATGTATAT GTTGAATGTG ATTATGAGTA 135651 |||||||||| |||||||||| | |||||||| |||||||||| | |||||||| |||||||||| AGCAAACTGC AGGAAAATTC TATTTTGGCA TTATGTATAT GCTGAATGTG ATTATGAGTA 300 TATACTCCAA AGGATGAATA CGATAAGGTA GATGTGTTAC GAATTATAAA ACGAGTTATC 135591 |||||||||| ||||||||| |||| ||||| ||||||| | |||||||||| |||||||||| TATACTCCAA CGGATGAATA CGATTAGGTA AATGTGTTGC GAATTATAAA ACGAGTTATC 360 ACTCGGTGTG TCGTTGCTTC GCTGATATAG TTGCCGAGAT GGAACTGTTT TGGGGAGGGG 135531 ||||||||| ||| |||||| |||| ||||| ||||| ||| |||||||||| |||||||||| GCTCGGTGTG TCGGTGCTTC GCTGCTATAG TTGCCCAGAC GGAACTGTTT TGGGGAGGGG 420 GCTGTTTAAT ATGATTCTTT GGGTTATATG TGTTA 135496 |||| |||| |||| ||| |||||||||| ||||| GCTGCCTAAT GTGATACTTC GGGTTATATG TGTTA 455 hqPGS_C10HBa0115K16.1-_SGN-E298250+ (135950 135496) ******************************************************************************** EST sequence 18 +strand 594 n (File: SGN-E350708+) 1 GGGGATTTAG TGCTTCTATT CAATTCCAGA TTGCGCTTGT TTCCAGGCAA ACTCAAGTCC 61 AAATGGACTG GTCCTTACAC GGTTACCCAA CTATTCCCTC ATGGAGCAGT TGAGTTGGAA 121 ACGAAGGAGG GTGTGCGGTT CAAGGTGAAT GGACAGCGCA TAAAAATCTA TCTCGGACAT 181 GCTGAATCGG CGAATGAAGT GATCGAGGCA TACCATCTTG ATGAAGTCTG AGTAATCAAG 241 TGGCCCCAGT CGTGCCGCGA CATTAAATCA GGCGCTTGTT GGGAGGCAAC CCAATACTTA 301 TCGTCTTTTT AATAATGGTA GCATTTTTTT CTATAAATGG GTTTTAAATT TGCAGGCACA 361 TCACCAAGAA ATTCTGCAGA AAACTACTCC GCAGTAGCCA CTGACGGATA CAACAACGGA 421 CCGTCGTATG CATCCGTCAC ACCAGGTATG TATTTCTGTC ATTTTTGAAA TTAGGGCGCA 481 TACGACGGAA CCTACGATGG GGCGTCGCAA GTGCGATGGA CCGTCGTCGG GGAACCGTTG 541 CGCGATTAAT GAAATCTNAC CGACCCACCC GGCTGGACCT TTTCAAATCT GACC Predicted gene structure (within gDNA segment 136239 to 138932): Exon 1 136839 137452 ( 614 n); cDNA 1 594 ( 594 n); score: 0.897 MATCH C10HBa0115K16.1+ SGN-E350708+ 0.897 614 1.034 C PGS_C10HBa0115K16.1+_SGN-E350708+ (136839 137452) Alignment (genomic DNA sequence = upper lines): GGGGATTTAG TGCTTCTATT CAATTCCAGA TTGCGCTTGT TTCCAGGCAA ACTCAAGTCC 136898 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGGGATTTAG TGCTTCTATT CAATTCCAGA TTGCGCTTGT TTCCAGGCAA ACTCAAGTCC 60 AAATGGACTG GTCCTTACAC TGTTACCCAA CTATTCCCTC ATGGAGCAGT TGATTTGGAA 136958 |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| ||| |||||| AAATGGACTG GTCCTTACAC GGTTACCCAA CTATTCCCTC ATGGAGCAGT TGAGTTGGAA 120 ACTAAGGAGG GTGTGCGGTT CAAGGTGAAT GGACAGTGCA TAAAAATCTA TCTCGGGCAT 137018 || ||||||| |||||||||| |||||||||| |||||| ||| |||||||||| |||||| ||| ACGAAGGAGG GTGTGCGGTT CAAGGTGAAT GGACAGCGCA TAAAAATCTA TCTCGGACAT 180 GCTGAATCGG CGAATGAAGT GATCGAGGCA TACCATCTTC ATGAAGTTTG AGTAATCAAG 137078 |||||||||| |||||||||| |||||||||| ||||||||| ||||||| || |||||||||| GCTGAATCGG CGAATGAAGT GATCGAGGCA TACCATCTTG ATGAAGTCTG AGTAATCAAG 240 TGGCCCCAGT CGTG-CGCGA CATTAAATCA GGCGCTGGTT GGGAGGCAAA CCAATACTTA 137137 |||||||||| |||| ||||| |||||||||| |||||| ||| ||||||||| |||||||||| TGGCCCCAGT CGTGCCGCGA CATTAAATCA GGCGCTTGTT GGGAGGCAAC CCAATACTTA 300 TCGTCTTTTT AATAATGGTA G-AATTCTTT CTATTAATGC GTTTTAAATT TGCAGGCACA 137196 |||||||||| |||||||||| | | || ||| |||| |||| |||||||||| |||||||||| TCGTCTTTTT AATAATGGTA GCATTTTTTT CTATAAATGG GTTTTAAATT TGCAGGCACA 360 TCACCAGGAA ATTCTGTAGA AAACTACTCC GCAGTAGCCA CTGACGGATA CAACGACGGA 137256 |||||| ||| |||||| ||| |||||||||| |||||||||| ||||||||| || | TCACCAAGAA ATTCTGCAGA AAACTACTCC GCAGTAGCCA CTGACGGAT- -----AC--A 412 CCGTTGTGCA TGCAACGGAC CGTCGTATGC ATCCGTCACA CCAGGTATGT ATTTCTGTCA 137316 | |||||||| |||||||||| |||||||||| |||||||||| |||||||||| ---------A --CAACGGAC CGTCGTATGC ATCCGTCACA CCAGGTATGT ATTTCTGTCA 461 TTTTGAATAT TAGGGCACAC ACGACGGAAC CTACGACAGC TCATCACAAA TGCGACAGAC 137376 |||| | || |||||| || |||||||||| |||||| | | || ||| ||||| ||| TTTTTGAAAT TAGGGCGCAT ACGACGGAAC CTACGATGGG GCGTCGCAAG TGCGATGGAC 521 CGTCGTCCGG GAACCGTCGC GTGATTAATG AATTCTACCC GACCCGACCC GGCTGGACCC 137436 ||||||| || ||||||| || | |||||||| || ||| || ||||| |||| ||||||| || CGTCGTCGGG GAACCGTTGC GCGATTAATG AAATCTNACC GACCC-ACCC GGCTGGA-CC 579 TTTTCAAAAT ATGACC 137452 ||||| |||| ||||| TTTTC-AAAT CTGACC 594 hqPGS_C10HBa0115K16.1+_SGN-E350708+ (136839 137452) ******************************************************************************** EST sequence 6 -strand 684 n (File: SGN-E350443-) 1 GGTGCCATAG TAAACAGTAC TTGTAAAGGA TCAATATTAG TACGGGTAGT GGCAAACAAG 61 ACAAGCAAAA CCATACTGAA CAAAACACTG GAAATAGTAG GTCATTACTA TAGAAACAGT 121 GACACACGAC GGGCCTGGTG ATGGCTCGTC GTGACTATGA CGGACCGTCA TAAGGTCCGT 181 CGTGTTTTAC TTAGACTATT TATATATAGA GAACCCTAAA GGAGAGTCTC TGACTAGCAT 241 AACGGTATGT GCAGGACGGA CCGTCACAGG TACGACGGTC CGTCGTAGGT GTCCGTCGTA 301 GGACACTTAA AAAAATATGG AGACCCTTAG GAGAGGGGTC TCTGACCGTC ATGACGGTCG 361 TGCAGGACGG AACATCGTGG GTATAACGGT CTGTCACATA TATTCGTTGA AGGACACTTA 421 GAAAAAATGA GAGACCCTTA GAAACAGGGT CTCTTACAAC CGGATTAGTT GTGCGGGACG 481 GACCGTCGTG AAGACGACGG TCCGTCACCA TGTGTCCGTT GGGACAAGGT GCTAGGGATT 541 TTCGAATGGA CCCTACAACG GTCCATAGTG GGTACGACGG TCCGTCATCG GGGTCTCGTT 601 CTGAATAACA GTGACAAAAC TGAGGGTACC CTATGCATCC CTGATGAACC CACATCAAAC 661 TTGTAATGTT TTGGACCTAC ATTT Predicted gene structure (within gDNA segment 141503 to 136540): Exon 1 138643 138355 ( 289 n); cDNA 1 289 ( 289 n); score: 0.794 Intron 1 138354 138255 ( 100 n); Pd: 0.000 (s: 0.81), Pa: 0.000 (s: 0.78) Exon 2 138254 137863 ( 392 n); cDNA 290 682 ( 393 n); score: 0.792 MATCH C10HBa0115K16.1- SGN-E350443- 0.793 681 0.996 C PGS_C10HBa0115K16.1-_SGN-E350443- (138643 138355,138254 137863) Alignment (genomic DNA sequence = upper lines): GGTGCCATAG TAGATAGTAC CTGCAAAGGA TTACTATTAG TACGAGTAGT GTCAAACAAA 138584 |||||||||| || | ||||| || |||||| | | |||||| |||| ||||| | ||||||| GGTGCCATAG TAAACAGTAC TTGTAAAGGA TCAATATTAG TACGGGTAGT GGCAAACAAG 60 ACAGGCAAGC CCATACAACA TAAAACATTT AAAATAGTGT GTTAGTGATA GTGAAACTGT 138524 ||| |||| |||||| | |||||| | ||||||| || | | || ||||| || ACAAGCAAAA CCATACTGAA CAAAACACTG GAAATAGTAG GTCATTACTA TAGAAACAGT 120 ATCACACGAA AGGCTAGATG ACGGCTCGTC GTGGATATGA CAGACCGTCA TGAGGTCCGT 138464 ||||||| ||| | || | |||||||| ||| ||||| | |||||||| | |||||||| GACACACGAC GGGCCTGGTG ATGGCTCGTC GTGACTATGA CGGACCGTCA TAAGGTCCGT 180 CGTGTTGTAC TTAGCCTATG TATATAGAAA GAACCCTGAA GGAGGGGTCT CTGACCATCA 138404 |||||| ||| |||| |||| |||||| | | ||||||| || ||| | |||| ||||| | || CGTGTTTTAC TTAGACTATT TATATATAGA GAACCCTAAA GGA-GAGTCT CTGACTAGCA 239 TGACGGT-CA AGCAGGACGG ACCGTCATTG GTATGACGGT CCGTCGTAGG ACACTTAGAA 138345 | ||||| ||||||||| ||||||| | ||| |||||| |||||||||| TAACGGTATG TGCAGGACGG ACCGTCACAG GTACGACGGT CCGTCGTAGG .......... 289 AATATTGGGA GACCCTTATC AGAGAAGTCT CTGACCATCA TGACGGTCAA GCAGGACGGA 138285 .......... .......... .......... .......... .......... .......... 289 CCGTTGTTGG TACGATGGTC CCGTTGTAAG AGTCCGTCGT AGGACACTTA GAAAATGTTG 138225 ||||||||| |||||||||| |||| | .......... .......... .......... TGTCCGTCGT AGGACACTTA -AAAAAATAT 318 GGATACCCTT ATCAGAGAAG TCTCTGACCA TCATGATGGT CAAGCAGGAC GGACCATCGT 138165 ||| |||||| | |||| | ||||||||| |||||| ||| | ||||||| ||| |||||| GGAGACCCTT AGGAGAGGGG TCTCTGACCG TCATGACGGT CGTGCAGGAC GGAACATCGT 378 TGGTACGACG GTCCGTCGTA AGAGTCCGTC GTAGGACAAT TAGAAAATGT TAGGAGACCC 138105 |||| ||| ||| ||| | | ||| | |||||| | ||||||| | | ||||||| GGGTATAACG GTCTGTCACA TATATTCGTT GAAGGACACT TAGAAAAAAT GA-GAGACCC 437 TTAGAAACAG GGTCTCTGAA AACCAGAATG GTTGTGCAGA ATGGACCGTC GTGAAGACAA 138045 |||||||||| ||||||| | |||| || | ||||||| | | |||||||| |||||||| | TTAGAAACAG GGTCTCTTAC AACCGGATTA GTTGTGCGGG ACGGACCGTC GTGAAGACGA 497 CGGTCCGTCA -CAGGCGT-C GTTGGGCAGG GGTTCTAGGG CTTGTGCAAT GGACCCTACG 137987 |||||||||| || | || | |||||| ||| |||||| || | ||| ||||||||| CGGTCCGTCA CCATGTGTCC GTTGGGACAA GGTGCTAGGG ATTTTCGAAT GGACCCTACA 557 ACGGTCCGTC GTGTGTGCGA CGGTCCGTCA TCGGGGTCTC GTTCTGAGTA GTAGTGTTAG 137927 ||||||| | ||| || ||| |||||||||| |||||||||| ||||||| || |||| | ACGGTCCATA GTGGGTACGA CGGTCCGTCA TCGGGGTCTC GTTCTGAATA ACAGTGACAA 617 AACTGGGGGT ACCCTACGCA TCCCCGATGA ACCCACAT-G GTCTTGTAGT GTTGTGGACC 137868 ||||| |||| |||||| ||| |||| ||||| |||||||| |||||| | ||| |||||| AACTGAGGGT ACCCTATGCA TCCCTGATGA ACCCACATCA AACTTGTAAT GTTTTGGACC 677 TATAT 137863 || || TACAT 682 hqPGS_C10HBa0115K16.1-_SGN-E350443- (138643 138355,138254 137863) ******************************************************************************** EST sequence 113 -strand 706 n (File: SGN-E577987-) 1 AGGTGTGTGT GGACATTGAC TTTGACAATT TTGCGGAGCA CAATAACTTT CTGTTGTTCC 61 ACACCAACTC CAAATACTAC AACACTCATT GCTTTTACAT TTTCCACCAC CACCTCCCAT 121 TCCACATCGC GGATATGGAG GTGGAGGTGA TAAGGAGGCG GGGGTCGAAA GGAGGATGAG 181 GCTAGAGCAC GGAAGAAGGA GCGCCGCAAG ACGGAGGCTA TGAGGACACT ACTGAAGGTG 241 TCTAGATTAC AGAGGTAGTG GGTTCCGGGG AACCACACCC ACTAGCTTGC TGATCGTCTG 301 CGCTTTGCGC CCCATGTTTT CTTCACCTAC CACTCTCGTA TTTCAATTTT TTATGCATTG 361 GGGACAATTC CATGTCTTTT TGTTGGGGGT GGGGTAAATG GAATGTGAGT TCTAGGGTGA 421 AGTCTGAGTA TCCCCATTCA CTATCATCTT TTGGGTTTTT CTTGCCTATG TTCTTTTTCC 481 CCAAGAGACT GATTATTTTT ACTGTTGAAC CGGCATGTCT ATATCTTGTG TACATAAAAT 541 AACTCTAAAG CATGATGGCT AAAACAAAAA TGATATCCTT ATGAAATGAA AATGATGCAT 601 GACTAGAAAT AGTAATAATT GTTGAAAAAG AAGAAAGTTG ACGATTGGAA CAGGTCCAAC 661 ACGTATCTGC AGCAAGTGTG GATGAAGAAG GAAGCTGATG ATTGAA Predicted gene structure (within gDNA segment 136747 to 145451): Exon 1 140462 140526 ( 65 n); cDNA 156 219 ( 64 n); score: 0.762 Intron 1 140527 140680 ( 154 n); Pd: 0.000 (s: 0.74), Pa: 0.000 (s: 0.82) Exon 2 140681 141024 ( 344 n); cDNA 220 563 ( 344 n); score: 0.844 Intron 2 141025 143193 (2169 n); Pd: 0.000 (s: 0.79), Pa: 0.742 (s: 0) Exon 3 143194 143207 ( 14 n); cDNA 564 576 ( 13 n); score: 0.786 Intron 3 143208 144475 (1268 n); Pd: 0.000 (s: 0), Pa: 0.629 (s: 0) Exon 4 144476 144507 ( 32 n); cDNA 577 607 ( 31 n); score: 0.609 MATCH C10HBa0115K16.1+ SGN-E577987- 0.831 455 0.644 C PGS_C10HBa0115K16.1+_SGN-E577987- (140462 140526,140681 141024,143194 143207,144476 144507) Alignment (genomic DNA sequence = upper lines): AGGCGTAGGG GTCGATCAGA GAATGAGGCG TGAGCAAGGA AGAAGGAGCG CCGAGAG-TG 140520 ||||| ||| ||||| || | ||||||| ||||| ||| |||||||||| ||| || | AGGCG--GGG GTCGAAAGGA GGATGAGGCT AGAGCACGGA AGAAGGAGCG CCGCAAGACG 213 GAGGCCGCGA GGAGAGCCTC ACTTGATGAG GCGGAGGCAC ACCAAATCAG ATCATCGCAG 140580 ||||| GAGGCT.... .......... .......... .......... .......... .......... 219 ATAGCGGCTG GGGCGTCTAG CTCCCGCACT GTAGAGACAG CACGAGGAAC TACTGATTGT 140640 .......... .......... .......... .......... .......... .......... 219 GCGGTTGTTG CTGAGGACAT CACTGAGGGT GTCCAGATTG CTGAGGACAC CACTGAGGGT 140700 ||||||||| ||||| ||| .......... .......... .......... .......... ATGAGGACAC TACTGAAGGT 239 GTCCAGATTG TAGAGGATGT GGGTTCTGGG AAACCGGACC CACCAGCTTG CTGATCGACG 140760 ||| ||||| ||||| || |||||| ||| |||| ||| ||| |||||| ||||||| | GTCTAGATTA CAGAGGTAGT GGGTTCCGGG GAACCACACC CACTAGCTTG CTGATCGTCT 299 ACGCTATGCG CCACAGGTTT GCTTCACCTA CCCCTCTAAT CTTTAGATTT TTTATGCATT 140820 |||| |||| || || |||| ||||||||| || |||| | ||| |||| |||||||||| GCGCTTTGCG CCCCATGTTT TCTTCACCTA CCACTCTCGT ATTTCAATTT TTTATGCATT 359 GGGGACAATT GCATGCTTCT TTGTTGGGGG TGGGGTAAAT GGAAAGTGAG TGTTAGGGTG 140880 |||||||||| |||| | | |||||||||| |||||||||| |||| ||||| | ||||||| GGGGACAATT CCATGTCTTT TTGTTGGGGG TGGGGTAAAT GGAATGTGAG TTCTAGGGTG 419 AAGTCTGAGT AGCCCAACTC ACTATCCTCT TTTGGGGGTT TTCTTGCCTG TGTTCTTTTT 140940 |||||||||| | ||| | || |||||| ||| ||| ||| || ||||||||| |||||||||| AAGTCTGAGT ATCCCCATTC ACTATCATCT TTT-GGGTTT TTCTTGCCTA TGTTCTTTTT 478 CCCCAAAAGA CTGATTACTT TTTCTGTTGA ACCGGCACGT -TTTATCTTT TGTACATAGT 140999 |||||| ||| ||||||| || || ||||||| ||||||| || | |||||| |||||||| CCCCAAGAGA CTGATTATTT TTACTGTTGA ACCGGCATGT CTATATCTTG TGTACATAAA 538 TTAACTCTGA AGCATGATGG ATAAAATTAT ATCCCGATAA AACTGGAAAA TGTTGCATGA 141059 ||||||| | |||||||||| |||| ATAACTCTAA AGCATGATGG CTAAA..... .......... .......... .......... 563 CTAGGCGTAG TAACTGATAA TTGTGTGGCT CTAAACATGA AATAGAGTTA CACCATTGCA 141119 .......... .......... .......... .......... .......... .......... 563 TTACCCTAAA TCTTCAAGTC AAACTAGGTG TCTGATAATC TGGTATAGTG ATGAGATGTC 141179 .......... .......... .......... .......... .......... .......... 563 AAGTGAGTGT GAGGAAAGTT GAATAGTCCA CTACTGGTAC TGAGCTAGAA CTTGCCTGGT 141239 .......... .......... .......... .......... .......... .......... 563 TAGTCTTGCT AAAAGTAAGC TCTAACAGAC AATTAGGAAA GGATCATAGG CCCTTATTCA 141299 .......... .......... .......... .......... .......... .......... 563 ATATGGCCCA TTTCTAGCCT AAATAAAAGA AATCAAATGA AAGTTATCCT TCTTTGATCC 141359 .......... .......... .......... .......... .......... .......... 563 AAATAATTTG AGATTAAAAT TAGACCTTTC TTTTTCACCC CAACTGATCT TTTCTGGGAA 141419 .......... .......... .......... .......... .......... .......... 563 CAATATGTTG GCCCTGGTCC CTCCTTGGAC ATGTGCACCT CAGCTTATGC CAAAAGCATA 141479 .......... .......... .......... .......... .......... .......... 563 AGTTGAGGGT GGCTACTGTA TAAACAACCT TCGTTATGGC CCTGAACCGA CTTTGGGTAT 141539 .......... .......... .......... .......... .......... .......... 563 TATGTACCTT GATTCATGGC AAAGCCATGA GTTGAGGGTG GCTGTTTTGA GGAATGCTCT 141599 .......... .......... .......... .......... .......... .......... 563 GGAAAGTGGG GTTGAAAGAA CAAAGAGAGA GAAAGAACAA AAGTAAAGTG ACTCAAGAAC 141659 .......... .......... .......... .......... .......... .......... 563 TCGTTGAAAG AAAAGGAAAG AAAAAGAGAA ATATTCAAGA ATTACAAACA AGAAAAGAAA 141719 .......... .......... .......... .......... .......... .......... 563 AGAGTTACTT ACACAAATGA AGAAAGAAGG GAAACAGCAA GGTGAAAGAA TAAGAGAAAC 141779 .......... .......... .......... .......... .......... .......... 563 TGGGCGAGAT AAAGTGATAG AAAGTGGAAG GTTTAGCCGA TATGTCAAGG AGGGCAAAAA 141839 .......... .......... .......... .......... .......... .......... 563 GTCACTAAAG TATACCTAAA TATACCCTAC CTGACTCTGA GCCTACGTTA CAAGCTAAAA 141899 .......... .......... .......... .......... .......... .......... 563 AAGTCCTATC GCGATCCTAA GGGTTGTATA GCGAACTTAA GGCAGTGAAA ATAAGGGCAA 141959 .......... .......... .......... .......... .......... .......... 563 GCTTATGGCA ATAGGTATGA ATGAGTGTGA CTTTGTTCTG AGAGCGAGTG TTGAAATGTA 142019 .......... .......... .......... .......... .......... .......... 563 ATCCTTATAC TCAAACTGAA ATCATTGTAT GAAAAATGAG GATTTTGTTC TAAAGTGAGG 142079 .......... .......... .......... .......... .......... .......... 563 ACACTAGTTG CAATACCGGA ATTGTTAGCA CCTCGGTGAG AAATTGAAGT GGATAGGTGT 142139 .......... .......... .......... .......... .......... .......... 563 TAGTGCATGG TGAGTCTGTG TCATGTTCGA ATCCCACAAA ATTCAAGCCT AATAGTGATA 142199 .......... .......... .......... .......... .......... .......... 563 GCATGCATTG ATTTGATGAG ATTAATCGGG ATTGATAGCC AAATGATTGC AAAGGATAAA 142259 .......... .......... .......... .......... .......... .......... 563 ACATGAATAC TATTGTACAA AGATTGTGTA GTGAGTCATA GTGCGTCGCT TGAGGACAAA 142319 .......... .......... .......... .......... .......... .......... 563 CAACGAATTT AAGTTGAGGG TGTTGATATA CCGTGATTTC ACGGCATAAT TAATACTTTT 142379 .......... .......... .......... .......... .......... .......... 563 TCCTTAAGTT TAGTGTGTCC GAAAGCCTTT TTTGTGCTAA TTTTGATATA AGTTTCTCTT 142439 .......... .......... .......... .......... .......... .......... 563 TGTTTTGCAG GAATCTGTCC AAAGATGAAT GCGGAGATTT TGAGCAAAAA ATGCAGAAGA 142499 .......... .......... .......... .......... .......... .......... 563 GACCACCCTA CGGAGCTTAT GACGGTCCGC CGTGCCTCTG ACGGTCCGTA GGTGGCAGCG 142559 .......... .......... .......... .......... .......... .......... 563 TAGAGAAGTT GCTGAAGGAA GATGGGGAAG TCTGACCAAG TGTGGGATTA CGAAGCTTGT 142619 .......... .......... .......... .......... .......... .......... 563 GACGGTCCGT CATGGCTATG ACGGTCCGTC CTACAGGTTC GTCGTGAAGA TCAGAGAAGT 142679 .......... .......... .......... .......... .......... .......... 563 GATCCCAGTA CTCAGATTCC AAGAGTTGTA GTATTTTGAA ACGAGACCCT CGATGGACCG 142739 .......... .......... .......... .......... .......... .......... 563 TTGTGCCTAT GACGGTCCGT CACACTTGCC GTCGAGGGGA ATGAAGAAAG CAGCAGAAGA 142799 .......... .......... .......... .......... .......... .......... 563 AATTGCACCA AGTATGGGAC GACGGAGTCC ACGACGATCC GTCATGACCA CGACGGTCCG 142859 .......... .......... .......... .......... .......... .......... 563 TCGCGTGGTC CGTCGACCCA GCCGCATTTT GGCAGATTTC TAGTAATTAG AATCCTTCTT 142919 .......... .......... .......... .......... .......... .......... 563 TAATTAAGTT TTTATTTTTT TATAAATAGT TCGAAAAACC TCGTTTTTGA GGTTAGACTC 142979 .......... .......... .......... .......... .......... .......... 563 TGGGAGATTA GACATCATAT TATTAGACTT TGTTTATTAG TGTTTGATTT TTTGGAGATT 143039 .......... .......... .......... .......... .......... .......... 563 CTTACAAGTA ATTTTTGGTG ATTAATCAAG CAATTTTTCG GACTTTACTC TTTCTCATTG 143099 .......... .......... .......... .......... .......... .......... 563 AAGTAAGTAC ATGAATTCTT ATTTAATATA TTTGAATATT GTGTTTATGG CTATGAGGAA 143159 .......... .......... .......... .......... .......... .......... 563 CTAAACTCCA TAACTAGGGT TGTGGGAACC ATAGGCAAAT AATGAGATAA ACCCTAGCTA 143219 |||| ||||| || .......... .......... .......... ....ACAAA- AATGATAT.. .......... 576 AAAGAACAAT TCTAGAATAG TGTCTTGCAT GTATTAATAA TTCTTTCACT TAGAAGTCTT 143279 .......... .......... .......... .......... .......... .......... 576 TTTAACGGAT GATCAACGTT AGAACTCGCC TTAATGCTAC TTGCCAGACC AAGGTGGTAG 143339 .......... .......... .......... .......... .......... .......... 576 ATAATAGGAA ACGAAGTATT AACATAGATT TAGTGTATAC TATCTAATAG GCTAGTATTG 143399 .......... .......... .......... .......... .......... .......... 576 ATTGGTACGA GGTAATAACT TAGTCAAATA TCGAATACGA TGCTTAATAT GAGGTAAAGA 143459 .......... .......... .......... .......... .......... .......... 576 TAAGGGTTAG GAAAGCAACA CACGTAGCCG GACCAAGGTG CGGAGTGAGA TTTTCTAGAT 143519 .......... .......... .......... .......... .......... .......... 576 GCCGGACCAA GGATTTAGAA ATACATAACT TATCACTTTG CATGCAAGAT ACTAGGAAAG 143579 .......... .......... .......... .......... .......... .......... 576 AATTGTTATA GTTAGAATTA TCAAGTTATG AACCTGCGGG GAACACGTAA ACCCTAGTTA 143639 .......... .......... .......... .......... .......... .......... 576 CTTTGATTAA TTGATTAAAA CCCAACATTA AAAGCTGTTA AGTGTCTCTT TCAAGTCCGT 143699 .......... .......... .......... .......... .......... .......... 576 TAGTTATTTT TACTCATTAG GAAATACAAA CCCCCTTTTT ATGCTTTTAC TTTCTAAGGA 143759 .......... .......... .......... .......... .......... .......... 576 AGTCATCAAC CGAACAATAG TAATAACAAG TTGAAGTTAA GTCTAGACTA TTTTCCTCGT 143819 .......... .......... .......... .......... .......... .......... 576 GGGAACGATC CCAACCTCTC TAGTTGGATT ATTTACTTGA CGCGACCGCT TTACTTCTCA 143879 .......... .......... .......... .......... .......... .......... 576 TTTGAGAAGT AAGTTTGAGC GTATCAAGAG GGAGGAGACA GGTGAGTGAA ATTGTGAGAG 143939 .......... .......... .......... .......... .......... .......... 576 AGAGGAGAGA GGCGAGCGGG AGAGTGGGAG AGATGTGAAT TGTATATGTA TATAGGTAAG 143999 .......... .......... .......... .......... .......... .......... 576 ATAATTGTAT ATTGCACATA TGCACTTGTC TATATGGAAA GCGATATTGG GAGAGAGAGG 144059 .......... .......... .......... .......... .......... .......... 576 AAAGAGGTGA GCGAGATTGG GAGAGGGAAG AGAGAGGCGA GTGAGAGAGG TGAATTGTAT 144119 .......... .......... .......... .......... .......... .......... 576 AAGTATATCA GTTAGATAAT TGTATATTCT ATATATGTAT TTATATATTC TGATAAATTA 144179 .......... .......... .......... .......... .......... .......... 576 TACATCTAAA AACGTGGCTA ATTATACAAA CTCAAAGTCA ACCCACATAA TTGATGTTAG 144239 .......... .......... .......... .......... .......... .......... 576 TCGCAAGTGG TAATTATAAC AAACTATAGC TATGATGAGT AATTAATTAG TATAAGTTTG 144299 .......... .......... .......... .......... .......... .......... 576 CTTAACAATG TAATTTTTCC TTTTCTGGAC AAAAAAGTAT AACCCGATCT GACCCGTCAA 144359 .......... .......... .......... .......... .......... .......... 576 ATTTCAAAGC TCGTATAAGT TAATCCAAAT GAAATGAATC CACCTATATT AATAGCTCTA 144419 .......... .......... .......... .......... .......... .......... 576 GACGTAATTA ACCCTATTCA CTAGTTAATG TAATGCAATA AGGGATCGTT TTGTAGGCTG 144479 || .......... .......... .......... .......... .......... ......CCT- 579 CATTAGA-AA AAATAATCCA TGTATTAGA 144507 || | | | |||| || || || | |||| TATGAAATGA AAATGATGCA TG-ACTAGA 607 hqPGS_C10HBa0115K16.1+_SGN-E577987- (140462 140526,140681 141024) ******************************************************************************** EST sequence 44 +strand 547 n (File: SGN-E243970+) 1 CCCCCTCGAG AGAGTGCCAA GAGGCGTAGG GGCCGATCAG AGGATGAGGC ACAAGCAAAG 61 AAGAAGGAGC GCCGAGAGAT GGAGGCTGCG AGGAGAGCCT CGCTGAGACG GAGGCACACC 121 AAATCAGAGC ATCGCAGATA GCGGATGGGG CGTCTAGCTC CCGCACTGTA GAGATAGCAA 181 GAGGCACTAC TGATGGTGCG GTTGTTGCTG AGGACATCAC TGAGGGTGTC CAGATTGCTG 241 AGGACACCAC TGAGGGTGTC CAGATTGCAG AGGATGTGGG TTCCAGGAAA CCGGACCCAC 301 CATCTTGTTA AATCGACGGT GCTTTGCGCC ACAGGTTTGC TTCACCTACC ACTCTAATAT 361 TTAGATTTTT TATGCATTGG GGACAGTTGC ATGCTTTTTT GTTGGGGGTG GGGTAAATGG 421 AAAGTGAGTG TTAGGGTGAA GTCTGAGTAG CCCAACTCAC TATCCTCTTT TGGGGTTTTC 481 TTGCCTGTGT TCTTTTTCCC CAAAAGACTG ATTACTTTTT TTGTTGAACC GACACGTTAT 541 ATATTTT Predicted gene structure (within gDNA segment 138872 to 141843): Exon 1 140442 140990 ( 549 n); cDNA 2 547 ( 546 n); score: 0.923 MATCH C10HBa0115K16.1+ SGN-E243970+ 0.923 549 1.004 C PGS_C10HBa0115K16.1+_SGN-E243970+ (140442 140990) Alignment (genomic DNA sequence = upper lines): CCCCTCGAGA GAGTTCCAAG AGGCGTAGGG GTCGATCAGA GAATGAGGCG TGAGCAAGGA 140501 |||||||||| |||| ||||| |||||||||| | |||||||| | ||||||| ||||| || CCCCTCGAGA GAGTGCCAAG AGGCGTAGGG GCCGATCAGA GGATGAGGCA CAAGCAAAGA 61 AGAAGGAGCG CCGAGAG-TG GAGGCCGCGA GGAGAGCCTC ACTTGATGAG GCGGAGGCAC 140560 |||||||||| ||||||| || ||||| |||| |||||||||| | ||| || ||||||||| AGAAGGAGCG CCGAGAGATG GAGGCTGCGA GGAGAGCCTC GC-TGA-GA- -CGGAGGCAC 117 ACCAAATCAG ATCATCGCAG ATAGCGGCTG GGGCGTCTAG CTCCCGCACT GTAGAGACAG 140620 |||||||||| | |||||||| ||||||| || |||||||||| |||||||||| ||||||| || ACCAAATCAG AGCATCGCAG ATAGCGGATG GGGCGTCTAG CTCCCGCACT GTAGAGATAG 177 CACGAGGAAC TACTGATTGT GCGGTTGTTG CTGAGGACAT CACTGAGGGT GTCCAGATTG 140680 || |||| || ||||||| || |||||||||| |||||||||| |||||||||| |||||||||| CAAGAGGCAC TACTGATGGT GCGGTTGTTG CTGAGGACAT CACTGAGGGT GTCCAGATTG 237 CTGAGGACAC CACTGAGGGT GTCCAGATTG TAGAGGATGT GGGTTCTGGG AAACCGGACC 140740 |||||||||| |||||||||| |||||||||| ||||||||| |||||| || |||||||||| CTGAGGACAC CACTGAGGGT GTCCAGATTG CAGAGGATGT GGGTTCCAGG AAACCGGACC 297 CACCAGCTTG CT-GATCGAC GACGCTATGC GCCACAGGTT TGCTTCACCT ACCCCTCTAA 140799 ||||| |||| | |||||| | ||| ||| |||||||||| |||||||||| ||| |||||| CACCATCTTG TTAAATCGAC GGTGCTTTGC GCCACAGGTT TGCTTCACCT ACCACTCTAA 357 TCTTTAGATT TTTTATGCAT TGGGGACAAT TGCATGCTTC TTTGTTGGGG GTGGGGTAAA 140859 | |||||||| |||||||||| |||||||| | ||||||||| |||||||||| |||||||||| TATTTAGATT TTTTATGCAT TGGGGACAGT TGCATGCTTT TTTGTTGGGG GTGGGGTAAA 417 TGGAAAGTGA GTGTTAGGGT GAAGTCTGAG TAGCCCAACT CACTATCCTC TTTTGGGGGT 140919 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||| ||||| TGGAAAGTGA GTGTTAGGGT GAAGTCTGAG TAGCCCAACT CACTATCCTC TTTT-GGGGT 476 TTTCTTGCCT GTGTTCTTTT TCCCCAAAAG ACTGATTACT TTTTCTGTTG AACCGGCACG 140979 |||||||||| |||||||||| |||||||||| |||||||||| |||| ||||| ||||| |||| TTTCTTGCCT GTGTTCTTTT TCCCCAAAAG ACTGATTACT TTTTTTGTTG AACCGACACG 536 TTTTATCTTT T 140990 || ||| ||| | TTATATATTT T 547 hqPGS_C10HBa0115K16.1+_SGN-E243970+ (140442 140990) ******************************************************************************** EST sequence 204 -strand 560 n (File: SGN-E244201-) 1 TTGGACATGT GCACCTCAGA TTATGCCAAA AGCATAAGTT GAGAGTGGCT AATGTAGTAA 61 ACAACCCTTT TTATGGCTCT GACCCAACTT TGGGTATTGA ATACTTTGAC TCATGGCAAA 121 GCCATGAGTT GAGAGTGGTT ATTATGAGGA ATGCTCTTGA AAGTGGGGTT GAAAGAACAA 181 AGAGAGAGAA AGAATAAAAG TAAATTGACT CAAGAATTAG TTGAAAGAAA AGTTAATATA 241 TATATATATA TATATATATA TATATACACA CACACACACA CACACACACA CACAAGAAAT 301 ACAAGCAAGA AAAGAAGAGT CACTTACAAA AATGAAGAAA GAAGGGAAAA TAACAAGGTG 361 AAAAAATATG AGAAACTGGG CAAATAAAAT GATAGAAAAT GGTATGTTTA GCCGATATTT 421 CAAGGAGGGC AAAAAGTCAC TAAAGTATAC CTAAATATAC CCTACCTGAC CCTGAGCCTA 481 TGTTACAAGC TAAGAAAGTC CTATCGCGAT CCTAAGAGTT GTATAGCAAA CTTAATGCAG 541 TGAAAATAAG TGCAAGCTTA Predicted gene structure (within gDNA segment 140834 to 143374): Exon 1 141444 141964 ( 521 n); cDNA 1 560 ( 560 n); score: 0.712 MATCH C10HBa0115K16.1+ SGN-E244201- 0.712 521 0.930 C PGS_C10HBa0115K16.1+_SGN-E244201- (141444 141964) Alignment (genomic DNA sequence = upper lines): TTGGACATGT GCACCTCAGC TTATGCCAAA AGCATAAGTT GAGGGTGGCT ACTGTA-TAA 141502 |||||||||| ||||||||| |||||||||| |||||||||| ||| |||||| | |||| ||| TTGGACATGT GCACCTCAGA TTATGCCAAA AGCATAAGTT GAGAGTGGCT AATGTAGTAA 60 ACAACCTTCG TTATGGCCCT GAACCGACTT TGGGTATTAT GTACCTTGAT TCATGGCAAA 141562 |||||| | ||||||| || || || |||| |||||||| ||| |||| |||||||||| ACAACCCTTT TTATGGCTCT GACCCAACTT TGGGTATTGA ATACTTTGAC TCATGGCAAA 120 GCCATGAGTT GAGGGTGGCT GTTTTGAGGA ATGCTCTGGA AAGTGGGGTT GAAAGAACAA 141622 |||||||||| ||| |||| | || |||||| ||||||| || |||||||||| |||||||||| GCCATGAGTT GAGAGTGGTT ATTATGAGGA ATGCTCTTGA AAGTGGGGTT GAAAGAACAA 180 AGAGAGAGAA AGAACAAAAG TAAAGTGACT CAAGAACTCG TTGAAAGAAA AG----GA-A 141677 |||||||||| |||| ||||| |||| ||||| |||||| | | |||||||||| || | | AGAGAGAGAA AGAATAAAAG TAAATTGACT CAAGAATTAG TTGAAAGAAA AGTTAATATA 240 -AGA-A-A-A -AGAGA-A-A TAT-T----- CA-AGA-A-- ---TTACA-A -ACAAG--A- 141712 | | | | | | | | | | ||| | || | | | ||| | ||||| | TATATATATA TATATATATA TATATACACA CACACACACA CACACACACA CACAAGAAAT 300 A-AAG-AA-- ----AAGAGT TACTTACACA AATGAAGAAA GAAGGG-AAA CAGCAAGGTG 141763 | ||| || |||||| ||||||| | |||||||||| |||||| ||| | ||||||| ACAAGCAAGA AAAGAAGAGT CACTTACAAA AATGAAGAAA GAAGGGAAAA TAACAAGGTG 360 AAAGAATAAG AGAAACTGGG CGAGATAAAG TGATAGAAAG TGGAAGGTTT AGCCGATATG 141823 ||| |||| | |||||||||| | | ||||| ||||||||| ||| | |||| ||||||||| AAAAAATATG AGAAACTGGG C-AAATAAAA TGATAGAAAA TGGTATGTTT AGCCGATATT 419 TCAAGGAGGG CAAAAAGTCA CTAAAGTATA CCTAAATATA CCCTACCTGA CTCTGAGCCT 141883 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| | |||||||| TCAAGGAGGG CAAAAAGTCA CTAAAGTATA CCTAAATATA CCCTACCTGA CCCTGAGCCT 479 ACGTTACAAG CTAAAAAAGT CCTATCGCGA TCCTAAGGGT TGTATAGCGA ACTTAAGGCA 141943 | |||||||| |||| ||||| |||||||||| ||||||| || |||||||| | |||||| ||| ATGTTACAAG CTAAGAAAGT CCTATCGCGA TCCTAAGAGT TGTATAGCAA ACTTAATGCA 539 GTGAAAATAA GGGCAAGCTT A 141964 |||||||||| | |||||||| | GTGAAAATAA GTGCAAGCTT A 560 hqPGS_C10HBa0115K16.1+_SGN-E244201- (141444 141964) ******************************************************************************** EST sequence 115 -strand 716 n (File: SGN-E578039-) 1 GTAATCCTTA TACTCAAACT AAAATCACTG TGTGAAAAAG GAGGATTTTG TCTTATAGTG 61 AGGACACTAG TTGCAATACT AGAATTGTTA GCACCTCGGT GAGAAATTGA AGAGGATAGG 121 TGTTAGTGCA TGGTAAGTCT GTGTCATATT CTGATCCCAC AAAATTCAAA CCTAATAGTG 181 ATAGCATGCA TAGATTTGAT GAGATTAATC GGGATTGATA GCCAAATGAT TGCAAAGGAT 241 AAAACATGGA TACTATTGTA CAAAGATTGT GTAGTGAGTC ATAGTGCGTC GCTTGAGGAC 301 AAACAACTAA TTTAAGTTGA GGGTGTTGAT ATACCGTGGT TTCACGGTAT TATTAATACT 361 TTTTCCTTAA GCTTAGTGTG TCCAAAAGCC TTTTTGTGCT AATTTTTATA TAAGTTACTC 421 TTTGTTTTGC AGGAAATCTG TCCAAAGCTG AATGCGGAGA TTTTGAGCGA AGAAATGCAG 481 AAGAAACCAC CTACGGAGCT TATGACGGTC CGTCGTGCTT GTGACGGTCC GTAGGTGGAA 541 GCGTAGTGCA GCTGCTGAAG GAAGATAGGG AAGTCTGACT AAGTGTGGGA TTACGAAGCT 601 TGTGACGGTC CGTCGTGGAT CTGACGGTCC GTCCTGCAGG TTCGTCGTGA AGTTCAGAGA 661 AGTGATCCCA GTACCCAAAT TCCAAGAGTT GAAGTGTATT AGAACAAAGA CCCTCG Predicted gene structure (within gDNA segment 140903 to 143710): Exon 1 142017 142731 ( 715 n); cDNA 1 716 ( 716 n); score: 0.917 MATCH C10HBa0115K16.1+ SGN-E578039- 0.917 715 0.999 C PGS_C10HBa0115K16.1+_SGN-E578039- (142017 142731) Alignment (genomic DNA sequence = upper lines): GTAATCCTTA TACTCAAACT GAAATCATTG TATGAAAAAT GAGGATTTTG TTCTAAAGTG 142076 |||||||||| |||||||||| |||||| || | ||||||| |||||||||| | || |||| GTAATCCTTA TACTCAAACT AAAATCACTG TGTGAAAAAG GAGGATTTTG TCTTATAGTG 60 AGGACACTAG TTGCAATACC GGAATTGTTA GCACCTCGGT GAGAAATTGA AGTGGATAGG 142136 |||||||||| ||||||||| ||||||||| |||||||||| |||||||||| || ||||||| AGGACACTAG TTGCAATACT AGAATTGTTA GCACCTCGGT GAGAAATTGA AGAGGATAGG 120 TGTTAGTGCA TGGTGAGTCT GTGTCATGTT CGAATCCCAC AAAATTCAAG CCTAATAGTG 142196 |||||||||| |||| ||||| ||||||| || | ||||||| ||||||||| |||||||||| TGTTAGTGCA TGGTAAGTCT GTGTCATATT CTGATCCCAC AAAATTCAAA CCTAATAGTG 180 ATAGCATGCA TTGATTTGAT GAGATTAATC GGGATTGATA GCCAAATGAT TGCAAAGGAT 142256 |||||||||| | |||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATAGCATGCA TAGATTTGAT GAGATTAATC GGGATTGATA GCCAAATGAT TGCAAAGGAT 240 AAAACATGAA TACTATTGTA CAAAGATTGT GTAGTGAGTC ATAGTGCGTC GCTTGAGGAC 142316 |||||||| | |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAACATGGA TACTATTGTA CAAAGATTGT GTAGTGAGTC ATAGTGCGTC GCTTGAGGAC 300 AAACAACGAA TTTAAGTTGA GGGTGTTGAT ATACCGTGAT TTCACGGCAT AATTAATACT 142376 ||||||| || |||||||||| |||||||||| |||||||| | ||||||| || ||||||||| AAACAACTAA TTTAAGTTGA GGGTGTTGAT ATACCGTGGT TTCACGGTAT TATTAATACT 360 TTTTCCTTAA GTTTAGTGTG TCCGAAAGCC TTTTTTGTGC TAATTTTGAT ATAAGTTTCT 142436 |||||||||| | |||||||| ||| |||||| ||||||||| ||||||| || ||||||| || TTTTCCTTAA GCTTAGTGTG TCCAAAAGCC -TTTTTGTGC TAATTTTTAT ATAAGTTACT 419 CTTTGTTTTG CAGG-AATCT GTCCAAAGAT GAATGCGGAG ATTTTGAGC- AAAAAATGCA 142494 |||||||||| |||| ||||| |||||||| | |||||||||| ||||||||| || ||||||| CTTTGTTTTG CAGGAAATCT GTCCAAAGCT GAATGCGGAG ATTTTGAGCG AAGAAATGCA 479 GAAGAGACCA CCCTACGGAG CTTATGACGG TCCGCCGTGC CTCTGACGGT CCGTAGGTGG 142554 ||||| |||| ||||||||| |||||||||| |||| ||||| | ||||||| |||||||||| GAAGAAACCA -CCTACGGAG CTTATGACGG TCCGTCGTGC TTGTGACGGT CCGTAGGTGG 538 CAGCGTAGAG AAGTTGCTGA AGGAAGATGG GGAAGTCTGA CCAAGTGTGG GATTACGAAG 142614 ||||||| | || |||||| |||||||| | |||||||||| | |||||||| |||||||||| AAGCGTAGTG CAGCTGCTGA AGGAAGATAG GGAAGTCTGA CTAAGTGTGG GATTACGAAG 598 CTTGTGACGG TCCGTCATGG CTATGACGGT CCGTCCTACA GGTTCGTCGT GAAGATCAGA 142674 |||||||||| |||||| ||| | ||||||| ||||||| || |||||||||| |||| ||||| CTTGTGACGG TCCGTCGTGG ATCTGACGGT CCGTCCTGCA GGTTCGTCGT GAAGTTCAGA 658 GAAGTGATCC CAGTACTCAG ATTCCAAGAG TTGTAGTAT- TTTGAAACGA GACCCTCG 142731 |||||||||| |||||| || |||||||||| ||| ||| | || ||| | |||||||| GAAGTGATCC CAGTACCCAA ATTCCAAGAG TTGAAGTGTA TTAGAACAAA GACCCTCG 716 hqPGS_C10HBa0115K16.1+_SGN-E578039- (142017 142731) ******************************************************************************** EST sequence 147 -strand 673 n (File: SGN-E352282-) 1 AATTCAAGCA TAATAGTGAT AACATGCATA AACATGATGA GAATGATTGG GATTGATAGT 61 CAAATGATTG CGAACGCTAA AATATAGATA CTCTNGTACA AAGATTTTGT AGTGAGTCAT 121 AGTGTGTCAC TTGAGGACAA ACAACAAATT TAAGTTGAGG GTGTTGATGT ACCGTGGTTT 181 CACGGTATTT TTAATGCTTT TTCCTTAAGT TTAGTGTGTG TCCAAAAGCC TTTTTGTATT 241 GATTTTTATG TCAGTTTCTA CTTATTTACA GGTTATCTGT CCAAAGATGA ACGCAGAAGT 301 TTTTGAGTGA TAAATGCAGC AGAGACCACC TACGGAGCTT ATGACGATCC GTCGAGTCTG 361 TGACGGTCCA TAGGTGTCAT CATAGTGAGA AGAGAAGTTG CTGAAGGAAG ATGGGGAAGT 421 ATGACCTAGT GTGGGATTAC GGAAGTCCAT GACGGACCGT CATTGCCACA ACGGTCCATC 481 CTGCTGGTTC ATCATAATGA TCAGAGAGTA CTCCCAGTAC CCAAATTCAA ATAAGTTAAA 541 GTATTATGGA ACGGAGACCC TCGACAGACC ATCGTTCTTG GAACAGTCTG TCATACCTGT 601 TTGTTGAGGG TAATGAAGAT AGAAGAAGAA GAATATGTGA AGTATGGGAC GACGGAGGCC 661 ATGACGGCCC GTC Predicted gene structure (within gDNA segment 140606 to 145720): Exon 1 142179 142842 ( 664 n); cDNA 1 673 ( 673 n); score: 0.767 MATCH C10HBa0115K16.1+ SGN-E352282- 0.767 664 0.987 C PGS_C10HBa0115K16.1+_SGN-E352282- (142179 142842) Alignment (genomic DNA sequence = upper lines): AATTCAAGCC TAATAGTGAT AGCATGCATT GATTTGATGA GATTAATCGG GATTGATAGC 142238 ||||||||| |||||||||| | ||||||| | |||||| || | || || ||||||||| AATTCAAGCA TAATAGTGAT AACATGCATA AACATGATGA GAATGATTGG GATTGATAGT 60 CAAATGATTG CAAAGGATAA AACATGAATA CTATTGTACA AAGATTGTGT AGTGAGTCAT 142298 |||||||||| | || | ||| || || ||| || | ||||| |||||| ||| |||||||||| CAAATGATTG CGAACGCTAA AATATAGATA CTCTNGTACA AAGATTTTGT AGTGAGTCAT 120 AGTGCGTCGC TTGAGGACAA ACAACGAATT TAAGTTGAGG GTGTTGATAT ACCGTGATTT 142358 |||| ||| | |||||||||| ||||| |||| |||||||||| |||||||| | |||||| ||| AGTGTGTCAC TTGAGGACAA ACAACAAATT TAAGTTGAGG GTGTTGATGT ACCGTGGTTT 180 CACGGCATAA TTAATACTTT TTCCTTAAGT TTA--GTGTG TCCGAAAGCC TTTTTTGTGC 142416 ||||| || ||||| |||| |||||||||| ||| ||||| ||| |||||| ||||||| CACGGTATTT TTAATGCTTT TTCCTTAAGT TTAGTGTGTG TCCAAAAGCC -TTTTTGTAT 239 TAATTTTGAT ATAAGTTTCT CTTTGTTTTG CAGG-AATCT GTCCAAAGAT GAATGC-GGA 142474 | ||||| || | ||||||| || ||| |||| |||| |||||||||| ||| || | | TGATTTTTAT GTCAGTTTCT ACTT-ATTTA CAGGTTATCT GTCCAAAGAT GAACGCAGAA 298 GATTTTGAGC AAAAAATGCA GAAGAGACCA CCCTACGGAG CTTATGACGG TCCGCCGTGC 142534 | ||||||| | ||||||| | |||||||| ||||||||| ||||||||| |||| || | GTTTTTGAGT GATAAATGCA GCAGAGACCA -CCTACGGAG CTTATGACGA TCCGTCGAGT 357 CTCTGACGGT CCGTAGGTGG CAGC---GT- ---AGAGAAG TTGCTGAAGG AAGATGGGGA 142587 || ||||||| || |||||| || | || ||||||| |||||||||| |||||||||| CTGTGACGGT CCATAGGTGT CATCATAGTG AGAAGAGAAG TTGCTGAAGG AAGATGGGGA 417 AGTCTGACCA AGTGTGGGAT TAC-GAAGCT TGTGACGGTC CGTCATGGCT ATGACGGTCC 142646 ||| ||||| |||||||||| ||| |||| |||||| | |||||| || | ||||||| AGTATGACCT AGTGTGGGAT TACGGAAGTC CATGACGGAC CGTCATTGCC ACAACGGTCC 477 GTCCTACAGG TTCGTCGTGA AGATCAGAGA AGTGATCCCA GTACTCAGAT TCCAA-GAGT 142705 |||| | || ||| || | | |||||||| ||| ||||| |||| || || || || ||| ATCCTGCTGG TTCATCATAA TGATCAGAG- AGTACTCCCA GTACCCAAAT TCAAATAAGT 536 TGTAGTATTT TGAAAC-GAG ACCCTCGATG GACCGTTGTG CCTATGACGG TCCGTCACAC 142764 | |||||| || ||| ||| |||||||| |||| | || | | || | || |||| || TAAAGTATTA TGGAACGGAG ACCCTCGACA GACCATCGTT CTTGGAACAG TCTGTCATAC 596 TTG-CCGTCG AGGGGAATGA AGAAAGCAGC AGAAGAAATT GCACCAAGTA TGGGACGACG 142823 || || | |||| ||||| ||| || || ||||||| | | ||||| |||||||||| CTGTTTGTTG AGGGTAATGA AGATAGAAGA AGAAGAATAT G--TGAAGTA TGGGACGACG 654 GAGTCCACGA CGATCCGTC 142842 ||| ||| || || ||||| GAGGCCATGA CGGCCCGTC 673 hqPGS_C10HBa0115K16.1+_SGN-E352282- (142179 142842) ******************************************************************************** EST sequence 112 -strand 411 n (File: SGN-E577891-) 1 GCCAACAATG GCCTTCGAGT TCATGTCCCT GATATACCGT GGTTTCACGG TATAATTAAT 61 ACTTTTGCCT TAAGTTTAGT GTGTCCGTAA GCCTTTTTGT GCTAATTTTG GTATAAGTTT 121 CTCTTTATTT TGCAGGAAAT CTGTCCAAAG CTGAAAGCAG AGATTTTGAG CGAAAAAATG 181 TAGAAGAGAC CACCTACTGA GCTTATGACG GTCCATCGTG CCTTTGACGC TCCGTAGGTG 241 GCAGCGTAGA GAAGCTGCTG AAGGAAGATG GGGAAGTCTC ACCAAGTGTG GGATTACGAA 301 GATTGTGACG GTCCGTCATG GCTATGACGG TCCGTCCTGC AGGTTCGTCG TGAAGATCAG 361 AGAAGTGATT CCAGTACCCA GATTCCAAGA GCTGAAGTAT TTTGAAACGA A Predicted gene structure (within gDNA segment 141101 to 143702): Exon 1 142316 142723 ( 408 n); cDNA 3 410 ( 408 n); score: 0.892 MATCH C10HBa0115K16.1+ SGN-E577891- 0.892 408 0.993 C PGS_C10HBa0115K16.1+_SGN-E577891- (142316 142723) Alignment (genomic DNA sequence = upper lines): CAAACAACGA ATTTAAGTTG AGGGTGTTGA TATACCGTGA TTTCACGGCA TAATTAATAC 142375 ||| | | || |||| | | ||| ||||||||| |||||||| | |||||||||| CAACAATGGC CTTCGAGTTC ATGTCCCTGA TATACCGTGG TTTCACGGTA TAATTAATAC 62 TTTTTCCTTA AGTTTAGTGT GTCCGAAAGC CTTTTTTGTG CTAATTTTGA TATAAGTTTC 142435 |||| ||||| |||||||||| ||||| |||| | |||||||| ||||||||| |||||||||| TTTTGCCTTA AGTTTAGTGT GTCCGTAAGC C-TTTTTGTG CTAATTTTGG TATAAGTTTC 121 TCTTTGTTTT GCAGG-AATC TGTCCAAAGA TGAATGCGGA GATTTTGAGC -AAAAAATGC 142493 ||||| |||| ||||| |||| ||||||||| |||| || || |||||||||| |||||||| TCTTTATTTT GCAGGAAATC TGTCCAAAGC TGAAAGCAGA GATTTTGAGC GAAAAAATGT 181 AGAAGAGACC ACCCTACGGA GCTTATGACG GTCCGCCGTG CCTCTGACGG TCCGTAGGTG 142553 |||||||||| | ||||| || |||||||||| |||| |||| ||| ||||| |||||||||| AGAAGAGACC A-CCTACTGA GCTTATGACG GTCCATCGTG CCTTTGACGC TCCGTAGGTG 240 GCAGCGTAGA GAAGTTGCTG AAGGAAGATG GGGAAGTCTG ACCAAGTGTG GGATTACGAA 142613 |||||||||| |||| ||||| |||||||||| ||||||||| |||||||||| |||||||||| GCAGCGTAGA GAAGCTGCTG AAGGAAGATG GGGAAGTCTC ACCAAGTGTG GGATTACGAA 300 GCTTGTGACG GTCCGTCATG GCTATGACGG TCCGTCCTAC AGGTTCGTCG TGAAGATCAG 142673 | |||||||| |||||||||| |||||||||| |||||||| | |||||||||| |||||||||| GATTGTGACG GTCCGTCATG GCTATGACGG TCCGTCCTGC AGGTTCGTCG TGAAGATCAG 360 AGAAGTGATC CCAGTACTCA GATTCCAAGA GTTGTAGTAT TTTGAAACGA 142723 ||||||||| ||||||| || |||||||||| | || ||||| |||||||||| AGAAGTGATT CCAGTACCCA GATTCCAAGA GCTGAAGTAT TTTGAAACGA 410 hqPGS_C10HBa0115K16.1+_SGN-E577891- (142316 142723) ******************************************************************************** EST sequence 24 +strand 680 n (File: SGN-E346859+) 1 TTGATATGCC TTGGTATAAA AGAAGGCTTG ATCGATTGAC AGAATAAGAT TAGTGGAGCG 61 GGTGTCATGA ACCGACACGT AGAATTAGGG GATCGGGTAT CACGAACTGA CACGTAGAAC 121 TAGGGGATTG ATATACCGTG GTTTCACGGT ATAATTAATA CTTTTTCCTT AAGTTTAGTG 181 TGTCCGAAAG CCCTTTTTGT GCTAATTTTG ATATAAGTTT TTCTTTGTTT TGCAGGAAAT 241 CTGTCTAAAG CTGAATGCGG AGATTTTGAG CGATAAATGC AGAAGAGACC ACCTACGGAG 301 CTTATGACGG TCCGTCGTGC TTGTGACGGT CCGTAGGTGG CAGCGTAGAG AAGCTGCTGA 361 AGGAAGATGG GGAAGTCTGA CCAAGTGTGG GATTACGAAG CTTGTGACGG TCCGTCATGG 421 ATATGACGGT CCGTCCTGCA GGTTCGTCGC GAAGATCAGA GAAGTGATCC CAGTACCCAA 481 ATTCCAAAAG TTGAAGTATT TTGTAACGAA GACCCTCGAC GGACCGTCGT GCCTGTGACG 541 GTCCGTCACA CTTGCCGTCG AGGGGAATGA AGAAAGCAGC AGAAGAATTG CACCCAAGTA 601 TGGGGCGACG GAGCCCATGA CGGTCCGTCA TGACCACGAC GTTCTGTCGC GTGGTCCGTC 661 GACCCAGCCG CGTTTTGGCA Predicted gene structure (within gDNA segment 140265 to 144340): Exon 1 142336 142890 ( 555 n); cDNA 122 677 ( 556 n); score: 0.925 MATCH C10HBa0115K16.1+ SGN-E346859+ 0.925 555 0.816 C PGS_C10HBa0115K16.1+_SGN-E346859+ (142336 142890) Alignment (genomic DNA sequence = upper lines): AGGGTGTTGA TATACCGTGA TTTCACGGCA TAATTAATAC TTTTTCCTTA AGTTTAGTGT 142395 |||| |||| ||||||||| |||||||| | |||||||||| |||||||||| |||||||||| AGGGGATTGA TATACCGTGG TTTCACGGTA TAATTAATAC TTTTTCCTTA AGTTTAGTGT 181 GTCCGAAAGC CTTTTTTGTG CTAATTTTGA TATAAGTTTC TCTTTGTTTT GCAGG-AATC 142454 |||||||||| | |||||||| |||||||||| ||||||||| |||||||||| ||||| |||| GTCCGAAAGC CCTTTTTGTG CTAATTTTGA TATAAGTTTT TCTTTGTTTT GCAGGAAATC 241 TGTCCAAAGA TGAATGCGGA GATTTTGAGC AAAAAATGCA GAAGAGACCA CCCTACGGAG 142514 |||| |||| |||||||||| |||||||||| | ||||||| |||||||||| ||||||||| TGTCTAAAGC TGAATGCGGA GATTTTGAGC GATAAATGCA GAAGAGACCA -CCTACGGAG 300 CTTATGACGG TCCGCCGTGC CTCTGACGGT CCGTAGGTGG CAGCGTAGAG AAGTTGCTGA 142574 |||||||||| |||| ||||| | ||||||| |||||||||| |||||||||| ||| |||||| CTTATGACGG TCCGTCGTGC TTGTGACGGT CCGTAGGTGG CAGCGTAGAG AAGCTGCTGA 360 AGGAAGATGG GGAAGTCTGA CCAAGTGTGG GATTACGAAG CTTGTGACGG TCCGTCATGG 142634 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGGAAGATGG GGAAGTCTGA CCAAGTGTGG GATTACGAAG CTTGTGACGG TCCGTCATGG 420 CTATGACGGT CCGTCCTACA GGTTCGTCGT GAAGATCAGA GAAGTGATCC CAGTACTCAG 142694 ||||||||| ||||||| || ||||||||| |||||||||| |||||||||| |||||| || ATATGACGGT CCGTCCTGCA GGTTCGTCGC GAAGATCAGA GAAGTGATCC CAGTACCCAA 480 ATTCCAAGAG TTGTAGTATT TTGAAACG-A GACCCTCGAT GGACCGTTGT GCCTATGACG 142753 ||||||| || ||| |||||| ||| |||| | ||||||||| ||||||| || |||| ||||| ATTCCAAAAG TTGAAGTATT TTGTAACGAA GACCCTCGAC GGACCGTCGT GCCTGTGACG 540 GTCCGTCACA CTTGCCGTCG AGGGGAATGA AGAAAGCAGC AGAAGAAATT GCA-CCAAGT 142812 |||||||||| |||||||||| |||||||||| |||||||||| ||||| |||| ||| |||||| GTCCGTCACA CTTGCCGTCG AGGGGAATGA AGAAAGCAGC AGAAG-AATT GCACCCAAGT 599 ATGGGACGAC GGAGTCCACG ACGATCCGTC ATGACCACGA CGGTCCGTCG CGTGGTCCGT 142872 ||||| |||| |||| ||| | ||| |||||| |||||||||| || || |||| |||||||||| ATGGGGCGAC GGAGCCCATG ACGGTCCGTC ATGACCACGA CGTTCTGTCG CGTGGTCCGT 659 CGACCCAGCC GCATTTTG 142890 |||||||||| || ||||| CGACCCAGCC GCGTTTTG 677 hqPGS_C10HBa0115K16.1+_SGN-E346859+ (142336 142890) ******************************************************************************** EST sequence 178 -strand 800 n (File: SGN-E540293-) 1 AGTAGCCTAA ACTAAGTCTA TGTGAGAGGT CTAGAGCCAA GGAAGAGGGC TAGGGCAGCC 61 AAATTTTCCC CAGACATTTC CCACCTTCTC ACGACCACCG TAATGGACAA TGCTGAGGAC 121 CACAGATCGT GGTGGGCTAG GCTGTGGCTA GGTGAAATCT GCCCAAAATA GCCCCCTCCA 181 CACAAGCTAT TTCACGGCTC GTGAAAGCTA TTATTGGCCG TGGAAAGGCT CGTGGTGGGG 241 ACTTAGTTTT GAGGGGTTAA GGAAGTGGTG GCCAAGTGAT ATACCGTGGT TTCATGGTAT 301 TATTAATACT TTTTCCTTAA GTTTAGTGTG TCTAAAATCC TTTTTGTGCT AATTTCTATA 361 TTAGTTTCTT TTTATTTTGC AGGAAATCTG TCCAAAGCTG AATGCGGAGA TTTTGAGCGA 421 AGAAATGCAG AAGAGACCAC CTACGGAGCT TATGACGGTC CGTCGTGCTT GTGACGGTCC 481 GTAGGTGTCA GCGTAGTGCA GCTGCTGAAG GAAGATGGGG AAGTCTGACC AAGTATGGGG 541 TTACGAAGCT TGTGACGGTC CATCGTGTCT ATGACGGTCC GTCCTACAGG TTCGTCATGA 601 AGTTCAGAGA AGTAATCCCA GTACCCATAT TCCAAGAGTT AAAGTGTTTT GGAACGAAGG 661 CCCTCGACGG ACCGTTGTGC CTATGACGGT CCGCCATACT TGCCGTTGAG GGTAATGAAG 721 AAGAGCAACA AAAGAAATTG CATAAGTATG GGACGACGGA GTCCATGACG GTCCGTCGTG 781 ACCATGACGG ACCTCGCGAC Predicted gene structure (within gDNA segment 138748 to 145302): Exon 1 142343 142864 ( 522 n); cDNA 277 798 ( 522 n); score: 0.879 MATCH C10HBa0115K16.1+ SGN-E540293- 0.879 522 0.652 C PGS_C10HBa0115K16.1+_SGN-E540293- (142343 142864) Alignment (genomic DNA sequence = upper lines): TGATATACCG TGATTTCACG GCATAATTAA TACTTTTTCC TTAAGTTTAG TGTGTCCGAA 142402 |||||||||| || ||||| | | || ||||| |||||||||| |||||||||| |||||| || TGATATACCG TGGTTTCATG GTATTATTAA TACTTTTTCC TTAAGTTTAG TGTGTCTAAA 336 AGCCTTTTTT GTGCTAATTT TGATATAAGT TTCTCTTTGT TTTGCAGGAA -TCTGTCCAA 142461 | || ||||| |||||||||| |||| ||| |||| ||| | |||||||||| ||||||||| ATCC-TTTTT GTGCTAATTT CTATATTAGT TTCTTTTTAT TTTGCAGGAA ATCTGTCCAA 395 AGATGAATGC GGAGATTTTG AGC-AAAAAA TGCAGAAGAG ACCACCCTAC GGAGCTTATG 142520 || ||||||| |||||||||| ||| || ||| |||||||||| |||| ||||| |||||||||| AGCTGAATGC GGAGATTTTG AGCGAAGAAA TGCAGAAGAG ACCA-CCTAC GGAGCTTATG 454 ACGGTCCGCC GTGCCTCTGA CGGTCCGTAG GTGGCAGCGT AGAGAAGTTG CTGAAGGAAG 142580 |||||||| | |||| | ||| |||||||||| ||| |||||| || | || || |||||||||| ACGGTCCGTC GTGCTTGTGA CGGTCCGTAG GTGTCAGCGT AGTGCAGCTG CTGAAGGAAG 514 ATGGGGAAGT CTGACCAAGT GTGGGATTAC GAAGCTTGTG ACGGTCCGTC ATGGCTATGA 142640 |||||||||| |||||||||| |||| |||| |||||||||| ||||||| || || |||||| ATGGGGAAGT CTGACCAAGT ATGGGGTTAC GAAGCTTGTG ACGGTCCATC GTGTCTATGA 574 CGGTCCGTCC TACAGGTTCG TCGTGAAGAT CAGAGAAGTG ATCCCAGTAC TCAGATTCCA 142700 |||||||||| |||||||||| || ||||| | ||||||||| |||||||||| || |||||| CGGTCCGTCC TACAGGTTCG TCATGAAGTT CAGAGAAGTA ATCCCAGTAC CCATATTCCA 634 AGAGTTGTAG TATTTTGAAA CG-AGACCCT CGATGGACCG TTGTGCCTAT GACGGTCCGT 142759 |||||| || | ||||| || || || |||| ||| |||||| |||||||||| ||||||||| AGAGTTAAAG TGTTTTGGAA CGAAGGCCCT CGACGGACCG TTGTGCCTAT GACGGTCCGC 694 CACACTTGCC GTCGAGGGGA ATGAAGAA-A GCAGCAGAAG AAATTGCACC AAGTATGGGA 142818 || ||||||| || ||||| | |||||||| | ||| || ||| |||||||| |||||||||| CATACTTGCC GTTGAGGGTA ATGAAGAAGA GCAACAAAAG AAATTGCA-T AAGTATGGGA 753 CGACGGAGTC CACGACGATC CGTCATGACC ACGACGGTCC GTCGCG 142864 |||||||||| || |||| || |||| ||||| | ||||| || ||||| CGACGGAGTC CATGACGGTC CGTCGTGACC ATGACGGACC -TCGCG 798 hqPGS_C10HBa0115K16.1+_SGN-E540293- (142343 142864) ******************************************************************************** EST sequence 192 -strand 534 n (File: SGN-E286708-) 1 TGGTGGCCAA GTGATATACC GTGGTTTCAT GGTATTATTA ATACTTTTTC CTTAAGTTTA 61 GTGTGTCTAA AATCCTTTTT GTGCTAATTT CTATATTAGT TTCTTTTTAT TTTGCAGGAA 121 ATCTGTCCAA AGCTGAATGC GGAGATTTTG AGCGAAGAAA TGCAGAAGAG ACCACCTACG 181 GAGCTTATGA CGGTCCGTCG TGCTTGTGAC GGTCCGTAGG TGTCAGCGTA GTGCAGCTGC 241 TGAAGGAAGA TGGGGAAGTC TGACCAAGTA TGGGGTTACG AAGCTTGTGA CGGTCCATCG 301 TGTCTATGAC GGTCCGTCCT ACAGGTTCGT CATGAAGTTC AGAGAAGTAA TCCCAGTACC 361 CATATTCCAA GAGTTAAAGT GTTTTGGAAC GAAGGCCCTC GACGGACCGT TGTGCCTATG 421 ACGGTCCGCC ATACTTGCCG TTGAGGGTAA TGAAGAAGAG CAACAAAAGA AATTGCATAA 481 GTATGGGACG ACGGAGTCCA TGACGGTCCG TCGTGACCAT GACGGACCTC GCGA Predicted gene structure (within gDNA segment 141398 to 145292): Exon 1 142343 142864 ( 522 n); cDNA 12 533 ( 522 n); score: 0.879 MATCH C10HBa0115K16.1+ SGN-E286708- 0.879 522 0.978 C PGS_C10HBa0115K16.1+_SGN-E286708- (142343 142864) Alignment (genomic DNA sequence = upper lines): TGATATACCG TGATTTCACG GCATAATTAA TACTTTTTCC TTAAGTTTAG TGTGTCCGAA 142402 |||||||||| || ||||| | | || ||||| |||||||||| |||||||||| |||||| || TGATATACCG TGGTTTCATG GTATTATTAA TACTTTTTCC TTAAGTTTAG TGTGTCTAAA 71 AGCCTTTTTT GTGCTAATTT TGATATAAGT TTCTCTTTGT TTTGCAGG-A ATCTGTCCAA 142461 | || ||||| |||||||||| |||| ||| |||| ||| | |||||||| | |||||||||| ATCC-TTTTT GTGCTAATTT CTATATTAGT TTCTTTTTAT TTTGCAGGAA ATCTGTCCAA 130 AGATGAATGC GGAGATTTTG AGC-AAAAAA TGCAGAAGAG ACCACCCTAC GGAGCTTATG 142520 || ||||||| |||||||||| ||| || ||| |||||||||| |||| ||||| |||||||||| AGCTGAATGC GGAGATTTTG AGCGAAGAAA TGCAGAAGAG ACCA-CCTAC GGAGCTTATG 189 ACGGTCCGCC GTGCCTCTGA CGGTCCGTAG GTGGCAGCGT AGAGAAGTTG CTGAAGGAAG 142580 |||||||| | |||| | ||| |||||||||| ||| |||||| || | || || |||||||||| ACGGTCCGTC GTGCTTGTGA CGGTCCGTAG GTGTCAGCGT AGTGCAGCTG CTGAAGGAAG 249 ATGGGGAAGT CTGACCAAGT GTGGGATTAC GAAGCTTGTG ACGGTCCGTC ATGGCTATGA 142640 |||||||||| |||||||||| |||| |||| |||||||||| ||||||| || || |||||| ATGGGGAAGT CTGACCAAGT ATGGGGTTAC GAAGCTTGTG ACGGTCCATC GTGTCTATGA 309 CGGTCCGTCC TACAGGTTCG TCGTGAAGAT CAGAGAAGTG ATCCCAGTAC TCAGATTCCA 142700 |||||||||| |||||||||| || ||||| | ||||||||| |||||||||| || |||||| CGGTCCGTCC TACAGGTTCG TCATGAAGTT CAGAGAAGTA ATCCCAGTAC CCATATTCCA 369 AGAGTTGTAG TATTTTGAAA CG-AGACCCT CGATGGACCG TTGTGCCTAT GACGGTCCGT 142759 |||||| || | ||||| || || || |||| ||| |||||| |||||||||| ||||||||| AGAGTTAAAG TGTTTTGGAA CGAAGGCCCT CGACGGACCG TTGTGCCTAT GACGGTCCGC 429 CACACTTGCC GTCGAGGGGA ATGAAGAA-A GCAGCAGAAG AAATTGCACC AAGTATGGGA 142818 || ||||||| || ||||| | |||||||| | ||| || ||| |||||||| |||||||||| CATACTTGCC GTTGAGGGTA ATGAAGAAGA GCAACAAAAG AAATTGCA-T AAGTATGGGA 488 CGACGGAGTC CACGACGATC CGTCATGACC ACGACGGTCC GTCGCG 142864 |||||||||| || |||| || |||| ||||| | ||||| || ||||| CGACGGAGTC CATGACGGTC CGTCGTGACC ATGACGGACC -TCGCG 533 hqPGS_C10HBa0115K16.1+_SGN-E286708- (142343 142864) ******************************************************************************** EST sequence 199 -strand 522 n (File: SGN-E243969-) 1 GGTATAATTA ATACTTTTGC CTTAAGTTTA AAGTGTCCGA AAGCCTTTTT TGTGCTAATT 61 TTGATATAAG TTTCTCTTTG TTTTGCAGGA AATCTGTCAA AAGCTGAAAG CGGAGATTTT 121 GAGCAAAAAA ATGCAGAAGA GACCACCTAC GGAGCTTTTG AAGGTCTGTC GTGCTTGTGA 181 CGGTCCGTAG GTGGTAGCGT AGAGAAGCTG CTGAAGGAAG ATGGGGAAGT CTGACCAAGT 241 GTGGGATTAC GAAGCTTGTG ACGGTCCGTC ATGGCTATGA CGGTCCGTCC TGCAGGTTCG 301 TCGTGAAGAT CAGAGAAGTG ATCCCAGTAC CCAGATTCCA AGAGTTGAAG TATTTTGAAA 361 CGAAGACCCT CGACAGACCG TTGTACCTAT GACGGTCCGT TACACTTGCC GTCGAGGGGA 421 ATGAAGAAAG CAGCAGAAGA AATTGCACCA AGTATGGGAC GACAGAGTCC ACGACGGTCC 481 GTCGCGTGGT CCGTCGACCA AGCCGCGTTT TGGCAGATTT CC Predicted gene structure (within gDNA segment 141464 to 143707): Exon 1 142362 142842 ( 481 n); cDNA 1 483 ( 483 n); score: 0.932 MATCH C10HBa0115K16.1+ SGN-E243969- 0.932 481 0.921 C PGS_C10HBa0115K16.1+_SGN-E243969- (142362 142842) Alignment (genomic DNA sequence = upper lines): GGCATAATTA ATACTTTTTC CTTAAGTTTA GTGTGTCCGA AAGCCTTTTT TGTGCTAATT 142421 || ||||||| |||||||| | |||||||||| |||||||| |||||||||| |||||||||| GGTATAATTA ATACTTTTGC CTTAAGTTTA AAGTGTCCGA AAGCCTTTTT TGTGCTAATT 60 TTGATATAAG TTTCTCTTTG TTTTGCAGG- AATCTGTCCA AAGATGAATG CGGAGATTTT 142480 |||||||||| |||||||||| ||||||||| |||||||| | ||| |||| | |||||||||| TTGATATAAG TTTCTCTTTG TTTTGCAGGA AATCTGTCAA AAGCTGAAAG CGGAGATTTT 120 GAGC-AAAAA ATGCAGAAGA GACCACCCTA CGGAGCTTAT GACGGTCCGC CGTGCCTCTG 142539 |||| ||||| |||||||||| ||||| |||| |||||||| | || |||| | ||||| | || GAGCAAAAAA ATGCAGAAGA GACCA-CCTA CGGAGCTTTT GAAGGTCTGT CGTGCTTGTG 179 ACGGTCCGTA GGTGGCAGCG TAGAGAAGTT GCTGAAGGAA GATGGGGAAG TCTGACCAAG 142599 |||||||||| ||||| |||| |||||||| | |||||||||| |||||||||| |||||||||| ACGGTCCGTA GGTGGTAGCG TAGAGAAGCT GCTGAAGGAA GATGGGGAAG TCTGACCAAG 239 TGTGGGATTA CGAAGCTTGT GACGGTCCGT CATGGCTATG ACGGTCCGTC CTACAGGTTC 142659 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| || ||||||| TGTGGGATTA CGAAGCTTGT GACGGTCCGT CATGGCTATG ACGGTCCGTC CTGCAGGTTC 299 GTCGTGAAGA TCAGAGAAGT GATCCCAGTA CTCAGATTCC AAGAGTTGTA GTATTTTGAA 142719 |||||||||| |||||||||| |||||||||| | |||||||| |||||||| | |||||||||| GTCGTGAAGA TCAGAGAAGT GATCCCAGTA CCCAGATTCC AAGAGTTGAA GTATTTTGAA 359 ACG-AGACCC TCGATGGACC GTTGTGCCTA TGACGGTCCG TCACACTTGC CGTCGAGGGG 142778 ||| |||||| |||| |||| ||||| |||| |||||||||| | |||||||| |||||||||| ACGAAGACCC TCGACAGACC GTTGTACCTA TGACGGTCCG TTACACTTGC CGTCGAGGGG 419 AATGAAGAAA GCAGCAGAAG AAATTGCACC AAGTATGGGA CGACGGAGTC CACGACGATC 142838 |||||||||| |||||||||| |||||||||| |||||||||| |||| ||||| ||||||| || AATGAAGAAA GCAGCAGAAG AAATTGCACC AAGTATGGGA CGACAGAGTC CACGACGGTC 479 CGTC 142842 |||| CGTC 483 hqPGS_C10HBa0115K16.1+_SGN-E243969- (142362 142842) ******************************************************************************** EST sequence 99 +strand 787 n (File: SGN-E369291+) 1 TATGGACGTA TGGTGCAAGG TTTATCTCAC GAAAAAGATA TACTGGTGGT CATGTTCTCA 61 ATGTTTTCGA CGCCAAGCAT CTCCATTCAG TAGTAAGCGA TTTACTTTTT AAGGAAATCT 121 GTCCAAAGAT GAATGCGGAG ATTTTGAGTG AAGAAATGCA GAATAGACGA CCTACAGAGC 181 TTATGACGGT CCGTCGTGCT TGTGACGGTC TGTAGGTGGC AGCGTAGTGC AGCTGCTGAA 241 AGAAGATGGG GAAGTCTGAC CAAGTGCGGG GCTACGGAGT TCATGACGGT CCGTCCTGCA 301 GGTTCGTCAT GAAGTTCAGA GAAGTAGTCC CAGTACCCAT ATTCCAAGAG TTCAAGTGTG 361 TTGAAACGAA GACCCTCGAT AGACCGTTGT GCCTATGACG GTCCGTCATA CCTGCCGTCG 421 AGGGTAATGA AGAGAGAAGC AAAAGAAATT GCATAAGTAT GGGACGACAG AGTCCATGAC 481 GGTCCATCGT GACCATGACG ATCCGTCGTG AGTTCTGTCG ACCCAGCCGC GTTTTGGCAG 541 ATTTCCAGCA AATAGAGTCC TTGTTTAGTT AGGTTTTTAT TTTCTATAAA TAGTTCGAAA 601 AACCTCGTTT TTGAGGTTAT ACTCCGTATT GTTAGACATC ATATTAGTAG ACACTGTATT 661 GTTAGACTTT TGAGAATCAT TACACTTTTT GTGAGATTGT TGATTACTTT AAGATTCTTT 721 GCAGTGATTA TTGGTGATTA ATCAACCAAA CTTTTTGAAT TTTAAAAAAA AAAAAAAAAA 781 AAAAAAA Predicted gene structure (within gDNA segment 140701 to 145264): Exon 1 142451 143065 ( 615 n); cDNA 116 704 ( 589 n); score: 0.815 PPA cDNA 764 787 MATCH C10HBa0115K16.1+ SGN-E369291+ 0.815 615 0.781 C PGS_C10HBa0115K16.1+_SGN-E369291+ (142451 143065) Alignment (genomic DNA sequence = upper lines): AATCTGTCCA AAGATGAATG CGGAGATTTT GAG-CAAAAA ATGCAGAAGA GACCACCCTA 142509 |||||||||| |||||||||| |||||||||| ||| || || |||||||| | ||| | |||| AATCTGTCCA AAGATGAATG CGGAGATTTT GAGTGAAGAA ATGCAGAATA GACGA-CCTA 174 CGGAGCTTAT GACGGTCCGC CGTGCCTCTG ACGGTCCGTA GGTGGCAGCG TAGAGAAGTT 142569 | |||||||| ||||||||| ||||| | || |||||| ||| |||||||||| ||| | || | CAGAGCTTAT GACGGTCCGT CGTGCTTGTG ACGGTCTGTA GGTGGCAGCG TAGTGCAGCT 234 GCTGAAGGAA GATGGGGAAG TCTGACCAAG TGTGGGATTA CGAAGCTTGT GACGGTCCGT 142629 |||||| ||| |||||||||| |||||||||| || || | || | |||| || GCTGAAAGAA GATGGGGAAG TCTGACCAAG TG-CGG---- -G--GC---T -ACGG--AGT 280 CATGGCTATG ACGGTCCGTC CTACAGGTTC GTCGTGAAGA TCAGAGAAGT GATCCCAGTA 142689 | | ||| |||||||||| || ||||||| ||| ||||| |||||||||| |||||||| --T--C-ATG ACGGTCCGTC CTGCAGGTTC GTCATGAAGT TCAGAGAAGT AGTCCCAGTA 335 CTCAGATTCC AAGAGTTGTA GTATTTTGAA ACG-AGACCC TCGATGGACC GTTGTGCCTA 142748 | || ||||| ||||||| | || | ||||| ||| |||||| ||||| |||| |||||||||| CCCATATTCC AAGAGTTCAA GTGTGTTGAA ACGAAGACCC TCGATAGACC GTTGTGCCTA 395 TGACGGTCCG TCACACTTGC CGTCGAGGGG AATGAAGAAA GCAGCAGAAG AAATTGCACC 142808 |||||||||| ||| || ||| ||||||||| |||||||| | | |||| ||| |||||||| TGACGGTCCG TCATACCTGC CGTCGAGGGT AATGAAGAGA GAAGCAAAAG AAATTGCA-T 454 AAGTATGGGA CGACGGAGTC CACGACGATC CGTCATGACC ACGACGGTCC GTCGCGTGGT 142868 |||||||||| |||| ||||| || |||| || | || ||||| | |||| ||| |||| | | | AAGTATGGGA CGACAGAGTC CATGACGGTC CATCGTGACC ATGACGATCC GTCGTGAGTT 514 CCGTCGACCC AGCCGCATTT TGGCAGATTT CTAGTAATTA GAATCCTTCT TTAATTAAGT 142928 | |||||||| |||||| ||| |||||||||| | || || || || ||||| | ||| ||| || CTGTCGACCC AGCCGCGTTT TGGCAGATTT CCAGCAAATA GAGTCCTTGT TTAGTTAGGT 574 TTTTATTTTT TTATAAATAG TTCGAAAAAC CTCGTTTTTG AGGTTAGACT CTGGGAGATT 142988 ||||| |||| ||||||||| |||||||||| |||||||||| |||||| ||| | | || TTTTA-TTTT CTATAAATAG TTCGAAAAAC CTCGTTTTTG AGGTTATACT CCGTATTGTT 633 AGACATCATA TTATTAGACT TTGTTTATTA GTGTTTGATT TTTTGGAGAT TCTTACAAGT 143048 |||||||||| ||| ||||| || || | |||| || | ||| || || ||||| | AGACATCATA TTAGTAGACA CTG--TA-T- -TGTTAGACT TTTGAGA-AT CATTACACTT 687 AATTTTTGGT GATTAAT 143065 | | | | || || TTTGTGAGAT TGTTGAT 704 hqPGS_C10HBa0115K16.1+_SGN-E369291+ (142451 143065) ******************************************************************************** EST sequence 263 -strand 737 n (File: SGN-E369290-) 1 GTCATGTTCT CAATGTTTTC GACGCCAAGC ATCTCCATTC AGTAGTAAGC GATTTACTTT 61 TTAAGGAAAT CTGTCCAAAG ATGAATGCGG AGATTTTGAG TGAAGAAATG CAGAATAGAC 121 GACCTACAGA GCTTATGACG GTCCGTCGTG CTTGTGACGG TCTGTAGGTG GCAGCGTAGT 181 GCAGCTGCTG AAAGAAGATG GGGAAGTCTG ACCAAGTGCG GGGCTACGGA GTTCATGACG 241 GTCCGTCCTG CAGGTTCGTC ATGAAGTTCA GAGAAGTAGT CCCAGTACCC ATATTCCAAG 301 AGTTCAAGTG TGTTGAAACG AAGACCCTCG ATAGACCGTT GTGCCTATGA CGGTCCGTCA 361 TACCTGCCGT CGAGGGTAAT GAAGAGAGAA GCAAAAGAAA TTGCATAAGT ATGGGACGAC 421 AGAGTCCATG ACGGTCCATC GTGACCATGA CGATCCGTCG TGAGTTCTGT CGACCCAGCC 481 GCGTTTTGGC AGATTTCCAG CAAATAGAGT CCTTGTTTAG TTAGGTTTTT ATTTTCTATA 541 AATAGTTCGA AAAACCTCGT TTTTGAGGTT ATACTCCGTA TTGTTAGACA TCATATTAGT 601 AGACACTGTA TTGTTAGACT TTTGAGAATC ATTACACTTT TTGTGAGATT GTTGATTACT 661 TTAAGATTCT TGCAAGTGAT TATTGGTGAT TAATCAAGCA AACTTTTGGA TTTTAAAAAA 721 AAAAAAAAAA AAAAAAA Predicted gene structure (within gDNA segment 141171 to 145234): Exon 1 142451 143062 ( 612 n); cDNA 68 650 ( 583 n); score: 0.820 PPA cDNA 715 737 MATCH C10HBa0115K16.1+ SGN-E369290- 0.820 612 0.830 C PGS_C10HBa0115K16.1+_SGN-E369290- (142451 143062) Alignment (genomic DNA sequence = upper lines): AATCTGTCCA AAGATGAATG CGGAGATTTT GAG-CAAAAA ATGCAGAAGA GACCACCCTA 142509 |||||||||| |||||||||| |||||||||| ||| || || |||||||| | ||| ||| || AATCTGTCCA AAGATGAATG CGGAGATTTT GAGTGAAGAA ATGCAGAATA GACGACC-TA 126 CGGAGCTTAT GACGGTCCGC CGTGCCTCTG ACGGTCCGTA GGTGGCAGCG TAGAGAAGTT 142569 | |||||||| ||||||||| ||||| | || |||||| ||| |||||||||| ||| | || | CAGAGCTTAT GACGGTCCGT CGTGCTTGTG ACGGTCTGTA GGTGGCAGCG TAGTGCAGCT 186 GCTGAAGGAA GATGGGGAAG TCTGACCAAG TGTGGGATTA CGAAGCTTGT GACGGTCCGT 142629 |||||| ||| |||||||||| |||||||||| || || | || | |||| || GCTGAAAGAA GATGGGGAAG TCTGACCAAG TG-CGG---- -G--GC---T -ACGG--AGT 232 CATGGCTATG ACGGTCCGTC CTACAGGTTC GTCGTGAAGA TCAGAGAAGT GATCCCAGTA 142689 | | ||| |||||||||| || ||||||| ||| ||||| |||||||||| |||||||| --T--C-ATG ACGGTCCGTC CTGCAGGTTC GTCATGAAGT TCAGAGAAGT AGTCCCAGTA 287 CTCAGATTCC AAGAGTTGTA GTATTTTGAA ACG-AGACCC TCGATGGACC GTTGTGCCTA 142748 | || ||||| ||||||| | || | ||||| ||| |||||| ||||| |||| |||||||||| CCCATATTCC AAGAGTTCAA GTGTGTTGAA ACGAAGACCC TCGATAGACC GTTGTGCCTA 347 TGACGGTCCG TCACACTTGC CGTCGAGGGG AATGAAGAAA GCAGCAGAAG AAATTGCACC 142808 |||||||||| ||| || ||| ||||||||| |||||||| | | |||| ||| |||||||| TGACGGTCCG TCATACCTGC CGTCGAGGGT AATGAAGAGA GAAGCAAAAG AAATTGCA-T 406 AAGTATGGGA CGACGGAGTC CACGACGATC CGTCATGACC ACGACGGTCC GTCGCGTGGT 142868 |||||||||| |||| ||||| || |||| || | || ||||| | |||| ||| |||| | | | AAGTATGGGA CGACAGAGTC CATGACGGTC CATCGTGACC ATGACGATCC GTCGTGAGTT 466 CCGTCGACCC AGCCGCATTT TGGCAGATTT CTAGTAATTA GAATCCTTCT TTAATTAAGT 142928 | |||||||| |||||| ||| |||||||||| | || || || || ||||| | ||| ||| || CTGTCGACCC AGCCGCGTTT TGGCAGATTT CCAGCAAATA GAGTCCTTGT TTAGTTAGGT 526 TTTTATTTTT TTATAAATAG TTCGAAAAAC CTCGTTTTTG AGGTTAGACT CTGGGAGATT 142988 ||||| |||| ||||||||| |||||||||| |||||||||| |||||| ||| | | || TTTTA-TTTT CTATAAATAG TTCGAAAAAC CTCGTTTTTG AGGTTATACT CCGTATTGTT 585 AGACATCATA TTATTAGACT TTGTTTATTA GTGTTTGATT TTTTGGAGAT TCTTACAAGT 143048 |||||||||| ||| ||||| || || | |||| || | ||| || || |||| | | AGACATCATA TTAGTAGACA CTG--TA-T- -TGTTAGACT TTTGAGA-AT CATTAC-ACT 638 AATTTTTGGT GATT 143062 |||| | |||| --TTTTGTGA GATT 650 hqPGS_C10HBa0115K16.1+_SGN-E369290- (142451 143062) ******************************************************************************** EST sequence 7 +strand 731 n (File: SGN-E261921+) 1 TATGGACGTA TGGTGCAAGG TTTATCTCAC GAAAAAGATA TACTGGTGGT CATGTTCTCA 61 ATGTTTTCGA CGCCAAGCAT CTCCATTCAG TAGTAAGCGA TTTACTTTTT AAGGAAATCT 121 GTCCAAAGAT GAATGCGGAG ATTTTGAGTG AAGAAATGCA GAATAGACGA CCTACAGAGC 181 TTATGACGGT CCGTCGTGCT TGTGACGGTC TGTAGGTGGC AGCGTAGTGC AGCTGCTGAA 241 AGAAGATGGG GAAGTCTGAC CAAGTGCGGG GCTACGGAGT TCATGACGGT CCGTCCTGCA 301 GGTTCGTCAT GAAGTTCAGA GAAGTAGTCC CAGTACCCAT ATTCCAAGAG TTCAAGTGTG 361 TTGAAACGAA GACCCTCGAT AGACCGTTGT GCCTATGACG GTCCGTCATA CCTGCCGTCG 421 AGGGTAATGA AGAGAGAAGC AAAAGAAATT GCATAAGTAT GGGACGACAG AGTCCATGAC 481 GGTCCATCGT GACCATGACG ATCCGTCGTG AGTTCTGTCG ACCCAGCCGC GTTTTGGCAG 541 ATTTCCAGCA AATAGAGTCC TTGTTTAGTT AGGTTTTTAT TTTCTATAAA TAGTTCGAAA 601 AACCTCGTTT TTGAGGTTAT ACTCCGTATT GTTAGACATC ATATTAGTAG ACACTGTATT 661 GTTAGACTTT TGAGAATCAT TACACTTTTT GTGAGATTGG TGATTACTTT AAGATCTTTT 721 GCAGTGATAT T Predicted gene structure (within gDNA segment 140701 to 144704): Exon 1 142451 143007 ( 557 n); cDNA 116 652 ( 537 n); score: 0.840 MATCH C10HBa0115K16.1+ SGN-E261921+ 0.840 557 0.762 C PGS_C10HBa0115K16.1+_SGN-E261921+ (142451 143007) Alignment (genomic DNA sequence = upper lines): AATCTGTCCA AAGATGAATG CGGAGATTTT GAG-CAAAAA ATGCAGAAGA GACCACCCTA 142509 |||||||||| |||||||||| |||||||||| ||| || || |||||||| | ||| | |||| AATCTGTCCA AAGATGAATG CGGAGATTTT GAGTGAAGAA ATGCAGAATA GACGA-CCTA 174 CGGAGCTTAT GACGGTCCGC CGTGCCTCTG ACGGTCCGTA GGTGGCAGCG TAGAGAAGTT 142569 | |||||||| ||||||||| ||||| | || |||||| ||| |||||||||| ||| | || | CAGAGCTTAT GACGGTCCGT CGTGCTTGTG ACGGTCTGTA GGTGGCAGCG TAGTGCAGCT 234 GCTGAAGGAA GATGGGGAAG TCTGACCAAG TGTGGGATTA CGAAGCTTGT GACGGTCCGT 142629 |||||| ||| |||||||||| |||||||||| || || | || | |||| || GCTGAAAGAA GATGGGGAAG TCTGACCAAG TG-CGG---- -G--GC---T -ACGG--AGT 280 CATGGCTATG ACGGTCCGTC CTACAGGTTC GTCGTGAAGA TCAGAGAAGT GATCCCAGTA 142689 | | ||| |||||||||| || ||||||| ||| ||||| |||||||||| |||||||| --T--C-ATG ACGGTCCGTC CTGCAGGTTC GTCATGAAGT TCAGAGAAGT AGTCCCAGTA 335 CTCAGATTCC AAGAGTTGTA GTATTTTGAA ACG-AGACCC TCGATGGACC GTTGTGCCTA 142748 | || ||||| ||||||| | || | ||||| ||| |||||| ||||| |||| |||||||||| CCCATATTCC AAGAGTTCAA GTGTGTTGAA ACGAAGACCC TCGATAGACC GTTGTGCCTA 395 TGACGGTCCG TCACACTTGC CGTCGAGGGG AATGAAGAAA GCAGCAGAAG AAATTGCACC 142808 |||||||||| ||| || ||| ||||||||| |||||||| | | |||| ||| |||||||| TGACGGTCCG TCATACCTGC CGTCGAGGGT AATGAAGAGA GAAGCAAAAG AAATTGCA-T 454 AAGTATGGGA CGACGGAGTC CACGACGATC CGTCATGACC ACGACGGTCC GTCGCGTGGT 142868 |||||||||| |||| ||||| || |||| || | || ||||| | |||| ||| |||| | | | AAGTATGGGA CGACAGAGTC CATGACGGTC CATCGTGACC ATGACGATCC GTCGTGAGTT 514 CCGTCGACCC AGCCGCATTT TGGCAGATTT CTAGTAATTA GAATCCTTCT TTAATTAAGT 142928 | |||||||| |||||| ||| |||||||||| | || || || || ||||| | ||| ||| || CTGTCGACCC AGCCGCGTTT TGGCAGATTT CCAGCAAATA GAGTCCTTGT TTAGTTAGGT 574 TTTTATTTTT TTATAAATAG TTCGAAAAAC CTCGTTTTTG AGGTTAGACT CTGGGAGATT 142988 ||||| |||| ||||||||| |||||||||| |||||||||| |||||| ||| | | || TTTTA-TTTT CTATAAATAG TTCGAAAAAC CTCGTTTTTG AGGTTATACT CCGTATTGTT 633 AGACATCATA TTATTAGAC 143007 |||||||||| ||| ||||| AGACATCATA TTAGTAGAC 652 hqPGS_C10HBa0115K16.1+_SGN-E261921+ (142451 143007) ******************************************************************************** EST sequence 258 -strand 746 n (File: SGN-E546025-) 1 GAAGACCAGT AACTCAAGCT GAGGCATTCA AGGCAACACA CATAAGAAAG AAGAAAAATN 61 CCGAAGATCC AGACGTGTGG ATTGAGCCGC GAGCTGAAGT GATCATGAAA TTTGTCCAAA 121 GCCAAATGCG GAGATTTTGA GAGAAGAAAT GCAGAAGAGA CCACCTATGG AGCTGATGAC 181 GGTCCGTCGT GCTTGTGACG GTCCGTAGGT GGCAGTGTAG AGAAGTTGCT GAAGGAAGAT 241 GGGGAAGTCT GACCAAGTGT GGGATTACGA AGCTTGTGAC GGTCCGTCAT GGCTATGACG 301 GTCTGTTCTG CAGGTTCGTC GTGGAGTTCA GAGAAGTAAT CCAGTACCTA GATTCCGAGA 361 GTTGAAGTAT TTTGAAACGA AGACCCTTGA CAGACCGTTG TGCCTATGAC AGTCCGTCAT 421 ACTTGCCGTC GAGGGGAATG AAGAGAGCAG CAGAAGAAAG TGCACAAGTA TGGGACGACG 481 GAGTCCATGA CGGTCCGTCA TGACCACGAC GGTCCGTCGC ATGGTCCGTC GACCCAGCCG 541 CGTTTTGGCA GATTTCCACC AATTAGAATT CTTGTGTAAT TAGGTTTTTA TTTTTATATA 601 AATAGTTCGA AAAACCTCAT TTTTGAGGTT AGACACCTGA TAGTTAGACT CTTAGATTGT 661 TAAAACTTCG TATTGGTGAA CATTGTATTG GAAAATTCTT GATAATCATT AGACTTTTCG 721 TGAGATTATT GATTAAAAAA AAAAAA Predicted gene structure (within gDNA segment 140617 to 145534): Exon 1 142451 142992 ( 542 n); cDNA 109 649 ( 541 n); score: 0.896 PPA cDNA 735 746 MATCH C10HBa0115K16.1+ SGN-E546025- 0.896 542 0.727 C PGS_C10HBa0115K16.1+_SGN-E546025- (142451 142992) Alignment (genomic DNA sequence = upper lines): AATCTGTCCA AAGATGAATG CGGAGATTTT GAG-CAAAAA ATGCAGAAGA GACCACCCTA 142509 ||| |||||| ||| |||| |||||||||| ||| || || |||||||||| |||||| ||| AATTTGTCCA AAGCCAAATG CGGAGATTTT GAGAGAAGAA ATGCAGAAGA GACCAC-CTA 167 CGGAGCTTAT GACGGTCCGC CGTGCCTCTG ACGGTCCGTA GGTGGCAGCG TAGAGAAGTT 142569 |||||| || ||||||||| ||||| | || |||||||||| |||||||| | |||||||||| TGGAGCTGAT GACGGTCCGT CGTGCTTGTG ACGGTCCGTA GGTGGCAGTG TAGAGAAGTT 227 GCTGAAGGAA GATGGGGAAG TCTGACCAAG TGTGGGATTA CGAAGCTTGT GACGGTCCGT 142629 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCTGAAGGAA GATGGGGAAG TCTGACCAAG TGTGGGATTA CGAAGCTTGT GACGGTCCGT 287 CATGGCTATG ACGGTCCGTC CTACAGGTTC GTCGTGAAGA TCAGAGAAGT GATCCCAGTA 142689 |||||||||| |||||| || || ||||||| |||||| || |||||||||| || |||||| CATGGCTATG ACGGTCTGTT CTGCAGGTTC GTCGTGGAGT TCAGAGAAGT AAT-CCAGTA 346 CTCAGATTCC AAGAGTTGTA GTATTTTGAA ACG-AGACCC TCGATGGACC GTTGTGCCTA 142748 | ||||||| ||||||| | |||||||||| ||| |||||| | || |||| |||||||||| CCTAGATTCC GAGAGTTGAA GTATTTTGAA ACGAAGACCC TTGACAGACC GTTGTGCCTA 406 TGACGGTCCG TCACACTTGC CGTCGAGGGG AATGAAGAAA GCAGCAGAAG AAATTGCACC 142808 |||| ||||| ||| |||||| |||||||||| |||||||| | |||||||||| ||| |||| | TGACAGTCCG TCATACTTGC CGTCGAGGGG AATGAAGAGA GCAGCAGAAG AAAGTGCA-C 465 AAGTATGGGA CGACGGAGTC CACGACGATC CGTCATGACC ACGACGGTCC GTCGCGTGGT 142868 |||||||||| |||||||||| || |||| || |||||||||| |||||||||| ||||| |||| AAGTATGGGA CGACGGAGTC CATGACGGTC CGTCATGACC ACGACGGTCC GTCGCATGGT 525 CCGTCGACCC AGCCGCATTT TGGCAGATTT CTAGTAATTA GAATCCTTCT TTAATTAAGT 142928 |||||||||| |||||| ||| |||||||||| | | ||||| |||| ||| | |||||| || CCGTCGACCC AGCCGCGTTT TGGCAGATTT CCACCAATTA GAATTCTTGT GTAATTAGGT 585 TTTTATTTTT TTATAAATAG TTCGAAAAAC CTCGTTTTTG AGGTTAGAC- TCTGGGAGAT 142987 |||||||||| ||||||||| |||||||||| ||| |||||| ||||||||| ||| || | TTTTATTTTT ATATAAATAG TTCGAAAAAC CTCATTTTTG AGGTTAGACA CCTGATAG-T 644 TAGAC 142992 ||||| TAGAC 649 hqPGS_C10HBa0115K16.1+_SGN-E546025- (142451 142992) ******************************************************************************** EST sequence 81 +strand 582 n (File: SGN-E322644+) 1 ATGCTTTGGC TATCTGGTAT GGACGTATGG TGCAAGGTTT ATCTCACGAA AAAGATATAC 61 TGGTGGTCAT GTTCTCAATG TTTTCGACGC CAAGCATCTC CATTCAGTAG TAAGCGATTT 121 ACTTTTTAAG GAAATCTGTC CAAAGATGAA TGCGGAGATT TTGAGTGAAG AAATGCAGAA 181 TAGACGACCT ACAGAGCTTA TGACGGTCCG TCGTGCTTGT GACGGTCTGT AGGTGGCAGC 241 GTAGTGCAGC TGCTGAAAGA AGATGGGGAA GTCTGACCAA GTGCGGGGCT ACGGAGTTCA 301 TGACGGTCCG TCCTGCAGGT TCGTCATGAA GTTCAGAGAA GTAGTCCCAG TACCCATATT 361 CCAAGAGTTC AAGTGTGTTG AAACGAAGAC CCTCGATAGA CCGTTGTGCC TATGACGGTC 421 CGTCATACCT GCCGTCGAGG GTAATGAAGA GAGAAGCAAA AGAAATTGCA TAAGTATGGG 481 ACGACAGAGT CCATGACGGT CCATCGTGAC CATGACGATC CGTCGTGAGT TCTGTCGACC 541 CAGCCGCGTT TTGGCAGATT TCCAGCAAAT AGAGTCCTTG TT Predicted gene structure (within gDNA segment 140531 to 146201): Exon 1 142451 142919 ( 469 n); cDNA 133 582 ( 450 n); score: 0.836 MATCH C10HBa0115K16.1+ SGN-E322644+ 0.836 469 0.806 C PGS_C10HBa0115K16.1+_SGN-E322644+ (142451 142919) Alignment (genomic DNA sequence = upper lines): AATCTGTCCA AAGATGAATG CGGAGATTTT GAG-CAAAAA ATGCAGAAGA GACCACCCTA 142509 |||||||||| |||||||||| |||||||||| ||| || || |||||||| | ||| | |||| AATCTGTCCA AAGATGAATG CGGAGATTTT GAGTGAAGAA ATGCAGAATA GACGA-CCTA 191 CGGAGCTTAT GACGGTCCGC CGTGCCTCTG ACGGTCCGTA GGTGGCAGCG TAGAGAAGTT 142569 | |||||||| ||||||||| ||||| | || |||||| ||| |||||||||| ||| | || | CAGAGCTTAT GACGGTCCGT CGTGCTTGTG ACGGTCTGTA GGTGGCAGCG TAGTGCAGCT 251 GCTGAAGGAA GATGGGGAAG TCTGACCAAG TGTGGGATTA CGAAGCTTGT GACGGTCCGT 142629 |||||| ||| |||||||||| |||||||||| || || | || | |||| || GCTGAAAGAA GATGGGGAAG TCTGACCAAG TG-CGG---- -G--GC---T -ACGG--AGT 297 CATGGCTATG ACGGTCCGTC CTACAGGTTC GTCGTGAAGA TCAGAGAAGT GATCCCAGTA 142689 | | ||| |||||||||| || ||||||| ||| ||||| |||||||||| |||||||| --T--C-ATG ACGGTCCGTC CTGCAGGTTC GTCATGAAGT TCAGAGAAGT AGTCCCAGTA 352 CTCAGATTCC AAGAGTTGTA GTATTTTGAA ACG-AGACCC TCGATGGACC GTTGTGCCTA 142748 | || ||||| ||||||| | || | ||||| ||| |||||| ||||| |||| |||||||||| CCCATATTCC AAGAGTTCAA GTGTGTTGAA ACGAAGACCC TCGATAGACC GTTGTGCCTA 412 TGACGGTCCG TCACACTTGC CGTCGAGGGG AATGAAGAAA GCAGCAGAAG AAATTGCACC 142808 |||||||||| ||| || ||| ||||||||| |||||||| | | |||| ||| |||||||| TGACGGTCCG TCATACCTGC CGTCGAGGGT AATGAAGAGA GAAGCAAAAG AAATTGCA-T 471 AAGTATGGGA CGACGGAGTC CACGACGATC CGTCATGACC ACGACGGTCC GTCGCGTGGT 142868 |||||||||| |||| ||||| || |||| || | || ||||| | |||| ||| |||| | | | AAGTATGGGA CGACAGAGTC CATGACGGTC CATCGTGACC ATGACGATCC GTCGTGAGTT 531 CCGTCGACCC AGCCGCATTT TGGCAGATTT CTAGTAATTA GAATCCTTCT T 142919 | |||||||| |||||| ||| |||||||||| | || || || || ||||| | | CTGTCGACCC AGCCGCGTTT TGGCAGATTT CCAGCAAATA GAGTCCTTGT T 582 hqPGS_C10HBa0115K16.1+_SGN-E322644+ (142451 142919) ******************************************************************************** EST sequence 49 +strand 508 n (File: SGN-E243137+) 1 CGTATGGTGC AAGGTTTATC TCACGAAAAA GATATACTGG TGGTCATGTT CTCAATGTTT 61 TCGACGCCAA GCATCTCCAT TCAGTAGAAA TCTGTCCAAA GATGAATGCG GAGATTTTGA 121 GTGAAGAAAT GCAGAATAGA CGACCTACAG AGCTTATGAC GGTCCGTCGT GCTTGTGACG 181 GTCTGTAGGT GGCAGCGTAG TGCAGCTGCT GAAAGAAGAT GGGGAAGTCT GACCAAGTGC 241 GGGGCTACGG AGTTCATGAC GGTCCGTCCT GCAGGTTCGT CATGAAGTTC AGAGAAGTAG 301 TCCCAGTACC CATATTCCAA GAGTTCAAGT GTGTTGAAAC GAAGACCCTC GATAGACCGT 361 TGTGCCTATG ACGGTCCGTC ATACCTGCCG TCGAGGGTAA TGAAGAGAGA AGCAAAAGAA 421 ATTGCATAAG TATGGGACGA CAGAGTCCAT GACGGTCCAT CGTGACCATG ACGATCCGTC 481 GTGAGTTTTT GTTACCCAAC CGCGTTTT Predicted gene structure (within gDNA segment 140971 to 145901): Exon 1 142451 142889 ( 439 n); cDNA 89 508 ( 420 n); score: 0.822 MATCH C10HBa0115K16.1+ SGN-E243137+ 0.822 439 0.864 C PGS_C10HBa0115K16.1+_SGN-E243137+ (142451 142889) Alignment (genomic DNA sequence = upper lines): AATCTGTCCA AAGATGAATG CGGAGATTTT GAG-CAAAAA ATGCAGAAGA GACCACCCTA 142509 |||||||||| |||||||||| |||||||||| ||| || || |||||||| | ||| | |||| AATCTGTCCA AAGATGAATG CGGAGATTTT GAGTGAAGAA ATGCAGAATA GACGA-CCTA 147 CGGAGCTTAT GACGGTCCGC CGTGCCTCTG ACGGTCCGTA GGTGGCAGCG TAGAGAAGTT 142569 | |||||||| ||||||||| ||||| | || |||||| ||| |||||||||| ||| | || | CAGAGCTTAT GACGGTCCGT CGTGCTTGTG ACGGTCTGTA GGTGGCAGCG TAGTGCAGCT 207 GCTGAAGGAA GATGGGGAAG TCTGACCAAG TGTGGGATTA CGAAGCTTGT GACGGTCCGT 142629 |||||| ||| |||||||||| |||||||||| || || | || | |||| || GCTGAAAGAA GATGGGGAAG TCTGACCAAG TG-CGG---- -G--GC---T -ACGG--AGT 253 CATGGCTATG ACGGTCCGTC CTACAGGTTC GTCGTGAAGA TCAGAGAAGT GATCCCAGTA 142689 | | ||| |||||||||| || ||||||| ||| ||||| |||||||||| |||||||| --T--C-ATG ACGGTCCGTC CTGCAGGTTC GTCATGAAGT TCAGAGAAGT AGTCCCAGTA 308 CTCAGATTCC AAGAGTTGTA GTATTTTGAA ACG-AGACCC TCGATGGACC GTTGTGCCTA 142748 | || ||||| ||||||| | || | ||||| ||| |||||| ||||| |||| |||||||||| CCCATATTCC AAGAGTTCAA GTGTGTTGAA ACGAAGACCC TCGATAGACC GTTGTGCCTA 368 TGACGGTCCG TCACACTTGC CGTCGAGGGG AATGAAGAAA GCAGCAGAAG AAATTGCACC 142808 |||||||||| ||| || ||| ||||||||| |||||||| | | |||| ||| |||||||| TGACGGTCCG TCATACCTGC CGTCGAGGGT AATGAAGAGA GAAGCAAAAG AAATTGCA-T 427 AAGTATGGGA CGACGGAGTC CACGACGATC CGTCATGACC ACGACGGTCC GTCGCGTGGT 142868 |||||||||| |||| ||||| || |||| || | || ||||| | |||| ||| |||| | | | AAGTATGGGA CGACAGAGTC CATGACGGTC CATCGTGACC ATGACGATCC GTCGTGAGTT 487 CCGTCGACCC AGCCGCATTT T 142889 |||| | |||| ||| | TTTGTTACCC AACCGCGTTT T 508 hqPGS_C10HBa0115K16.1+_SGN-E243137+ (142451 142889) ******************************************************************************** EST sequence 88 +strand 498 n (File: SGN-E258752+) 1 TATGGACGTA TGGTGCAAGG TTTATCTCAC GAAAAAGATA TACTGGTGGT CATGTTCTCA 61 ATGTTTTCGA CGCCAAGCAT CTCCATTCAG TAGTAAGCGA TTTACTTTTT AAGGAAATCT 121 GTCCAAAGAT GAATGCGGAG ATTTTGAGTG AAGAAATGCA GAATAGACGA CCTACAGAGC 181 TTATGACGGT CCGTCGTGCT TGTGACGGTC TGTAGGTGGC AGCGTAGTGC AGCTGCTGAA 241 AGAAGATGGG GAAGTCTGAC CAAGTGCGGG GCTACGGAGT TCATGACGGT CCGTCCTGCA 301 GGTTCGTCAT GAAGTTCAGA GAAGTAGTCC CAGTACCCAT ATTCCAAGAG TTCAAGTGTG 361 TTGAAACGAA GACCCTCGAT AGACCGTTGT GCCTATGACG GTCCGTCATA CCTGCCGTCG 421 AGGGTAATGA AGAGAGAAGC AAAAGAAATT GCATAAGTAT GGGACGACAG AGTCCATGAC 481 GGTCCATCGT GACCATGA Predicted gene structure (within gDNA segment 140701 to 145531): Exon 1 142451 142852 ( 402 n); cDNA 116 498 ( 383 n); score: 0.836 MATCH C10HBa0115K16.1+ SGN-E258752+ 0.836 402 0.807 C PGS_C10HBa0115K16.1+_SGN-E258752+ (142451 142852) Alignment (genomic DNA sequence = upper lines): AATCTGTCCA AAGATGAATG CGGAGATTTT GAG-CAAAAA ATGCAGAAGA GACCACCCTA 142509 |||||||||| |||||||||| |||||||||| ||| || || |||||||| | ||| | |||| AATCTGTCCA AAGATGAATG CGGAGATTTT GAGTGAAGAA ATGCAGAATA GACGA-CCTA 174 CGGAGCTTAT GACGGTCCGC CGTGCCTCTG ACGGTCCGTA GGTGGCAGCG TAGAGAAGTT 142569 | |||||||| ||||||||| ||||| | || |||||| ||| |||||||||| ||| | || | CAGAGCTTAT GACGGTCCGT CGTGCTTGTG ACGGTCTGTA GGTGGCAGCG TAGTGCAGCT 234 GCTGAAGGAA GATGGGGAAG TCTGACCAAG TGTGGGATTA CGAAGCTTGT GACGGTCCGT 142629 |||||| ||| |||||||||| |||||||||| || || | || | |||| || GCTGAAAGAA GATGGGGAAG TCTGACCAAG TG-CGG---- -G--GC---T -ACGG--AGT 280 CATGGCTATG ACGGTCCGTC CTACAGGTTC GTCGTGAAGA TCAGAGAAGT GATCCCAGTA 142689 | | ||| |||||||||| || ||||||| ||| ||||| |||||||||| |||||||| --T--C-ATG ACGGTCCGTC CTGCAGGTTC GTCATGAAGT TCAGAGAAGT AGTCCCAGTA 335 CTCAGATTCC AAGAGTTGTA GTATTTTGAA ACG-AGACCC TCGATGGACC GTTGTGCCTA 142748 | || ||||| ||||||| | || | ||||| ||| |||||| ||||| |||| |||||||||| CCCATATTCC AAGAGTTCAA GTGTGTTGAA ACGAAGACCC TCGATAGACC GTTGTGCCTA 395 TGACGGTCCG TCACACTTGC CGTCGAGGGG AATGAAGAAA GCAGCAGAAG AAATTGCACC 142808 |||||||||| ||| || ||| ||||||||| |||||||| | | |||| ||| |||||||| TGACGGTCCG TCATACCTGC CGTCGAGGGT AATGAAGAGA GAAGCAAAAG AAATTGCA-T 454 AAGTATGGGA CGACGGAGTC CACGACGATC CGTCATGACC ACGA 142852 |||||||||| |||| ||||| || |||| || | || ||||| | || AAGTATGGGA CGACAGAGTC CATGACGGTC CATCGTGACC ATGA 498 hqPGS_C10HBa0115K16.1+_SGN-E258752+ (142451 142852) ******************************************************************************** EST sequence 32 +strand 464 n (File: SGN-E255290+) 1 TATGGACGTA TGGTGCAAGG TTTATCTCAC GAAAAAGATA TACTGGTGGT CATGTTCTCA 61 ATGTTTTCGA CGCCAAGCAT CTCCATTCAG TAGTAAGCGA TTTACTTTTT AAGGAAATCT 121 GTCCAAAGAT GAATGCGGAG ATTTTGAGTG AAGAAATGCA GAATAGACGA CCTACAGAGC 181 TTATGACGGT CCGTCGTGCT TGTGACGGTC TGTAGGTGGC AGCGTAGTGC AGCTGCTGAA 241 AGAAGATGGG GAAGTCTGAC CAAGTGCGGG GCTACGGAGT TCATGACGGT CCGTCCTGCA 301 GGTTCGTCAT GAAGTTCAGA GAAGTAGTCC CAGTACCCAT ATTCCAAGAG TTCAAGTGTG 361 TTGAAACGAA GACCCTCGAT AGACCGTTGT GCCTATGACG GTCCGTCATA CCTGCCGTCG 421 AGGGTAATGA AGAGAGAAGC AAAAGAAATT GCATAAGTAT GGGA Predicted gene structure (within gDNA segment 140701 to 145191): Exon 1 142451 142818 ( 368 n); cDNA 116 464 ( 349 n); score: 0.837 MATCH C10HBa0115K16.1+ SGN-E255290+ 0.837 368 0.793 C PGS_C10HBa0115K16.1+_SGN-E255290+ (142451 142818) Alignment (genomic DNA sequence = upper lines): AATCTGTCCA AAGATGAATG CGGAGATTTT GAG-CAAAAA ATGCAGAAGA GACCACCCTA 142509 |||||||||| |||||||||| |||||||||| ||| || || |||||||| | ||| | |||| AATCTGTCCA AAGATGAATG CGGAGATTTT GAGTGAAGAA ATGCAGAATA GACGA-CCTA 174 CGGAGCTTAT GACGGTCCGC CGTGCCTCTG ACGGTCCGTA GGTGGCAGCG TAGAGAAGTT 142569 | |||||||| ||||||||| ||||| | || |||||| ||| |||||||||| ||| | || | CAGAGCTTAT GACGGTCCGT CGTGCTTGTG ACGGTCTGTA GGTGGCAGCG TAGTGCAGCT 234 GCTGAAGGAA GATGGGGAAG TCTGACCAAG TGTGGGATTA CGAAGCTTGT GACGGTCCGT 142629 |||||| ||| |||||||||| |||||||||| || || | || | |||| || GCTGAAAGAA GATGGGGAAG TCTGACCAAG TG-CGG---- -G--GC---T -ACGG--AGT 280 CATGGCTATG ACGGTCCGTC CTACAGGTTC GTCGTGAAGA TCAGAGAAGT GATCCCAGTA 142689 | | ||| |||||||||| || ||||||| ||| ||||| |||||||||| |||||||| --T--C-ATG ACGGTCCGTC CTGCAGGTTC GTCATGAAGT TCAGAGAAGT AGTCCCAGTA 335 CTCAGATTCC AAGAGTTGTA GTATTTTGAA ACG-AGACCC TCGATGGACC GTTGTGCCTA 142748 | || ||||| ||||||| | || | ||||| ||| |||||| ||||| |||| |||||||||| CCCATATTCC AAGAGTTCAA GTGTGTTGAA ACGAAGACCC TCGATAGACC GTTGTGCCTA 395 TGACGGTCCG TCACACTTGC CGTCGAGGGG AATGAAGAAA GCAGCAGAAG AAATTGCACC 142808 |||||||||| ||| || ||| ||||||||| |||||||| | | |||| ||| |||||||| TGACGGTCCG TCATACCTGC CGTCGAGGGT AATGAAGAGA GAAGCAAAAG AAATTGCA-T 454 AAGTATGGGA 142818 |||||||||| AAGTATGGGA 464 hqPGS_C10HBa0115K16.1+_SGN-E255290+ (142451 142818) ******************************************************************************** EST sequence 85 +strand 402 n (File: SGN-E258181+) 1 GACGTATGGT GCAAGGTTTA TCTCACGAAA AAGATATACT GGTGGTCATG TTCTCAATGT 61 TTTCGACGCC AAGCATCTCC ATTCAGTAGT AAGCGATTTA CTTTTTAAGG AAATCTGTCC 121 AAAGATGAAT GCGGAGATTT TGAGTGAAGA AATGCAGAAT AGACGACCTA CAGAGCTTAT 181 GACGGTCCGT CGTGCTTGTG ACGGTCTGTA GGTGGCAGCG TAGTGCAGCT GCTGAAAGAA 241 GATGGGGAAG TCTGACCAAG TGCGGGGCTA CGGAGTTCAT GACGGTCCGT CCTGCAGGTT 301 CGTCATGAAG TTCAGAGAAG TAGTCCCAGT ACCCATATTC CAAGAGTTCA AGTGTGTTGA 361 AACGAAAACC CTCTATAGAC CGTTGTGCCT ATGACGGTCC GT Predicted gene structure (within gDNA segment 140741 to 144611): Exon 1 142451 142759 ( 309 n); cDNA 112 402 ( 291 n); score: 0.825 MATCH C10HBa0115K16.1+ SGN-E258181+ 0.825 309 0.769 C PGS_C10HBa0115K16.1+_SGN-E258181+ (142451 142759) Alignment (genomic DNA sequence = upper lines): AATCTGTCCA AAGATGAATG CGGAGATTTT GAG-CAAAAA ATGCAGAAGA GACCACCCTA 142509 |||||||||| |||||||||| |||||||||| ||| || || |||||||| | ||| | |||| AATCTGTCCA AAGATGAATG CGGAGATTTT GAGTGAAGAA ATGCAGAATA GACGA-CCTA 170 CGGAGCTTAT GACGGTCCGC CGTGCCTCTG ACGGTCCGTA GGTGGCAGCG TAGAGAAGTT 142569 | |||||||| ||||||||| ||||| | || |||||| ||| |||||||||| ||| | || | CAGAGCTTAT GACGGTCCGT CGTGCTTGTG ACGGTCTGTA GGTGGCAGCG TAGTGCAGCT 230 GCTGAAGGAA GATGGGGAAG TCTGACCAAG TGTGGGATTA CGAAGCTTGT GACGGTCCGT 142629 |||||| ||| |||||||||| |||||||||| || || | || | |||| || GCTGAAAGAA GATGGGGAAG TCTGACCAAG TG-CGG---- -G--GC---T -ACGG--AGT 276 CATGGCTATG ACGGTCCGTC CTACAGGTTC GTCGTGAAGA TCAGAGAAGT GATCCCAGTA 142689 | | ||| |||||||||| || ||||||| ||| ||||| |||||||||| |||||||| --T--C-ATG ACGGTCCGTC CTGCAGGTTC GTCATGAAGT TCAGAGAAGT AGTCCCAGTA 331 CTCAGATTCC AAGAGTTGTA GTATTTTGAA ACG-AGACCC TCGATGGACC GTTGTGCCTA 142748 | || ||||| ||||||| | || | ||||| ||| | |||| || || |||| |||||||||| CCCATATTCC AAGAGTTCAA GTGTGTTGAA ACGAAAACCC TCTATAGACC GTTGTGCCTA 391 TGACGGTCCG T 142759 |||||||||| | TGACGGTCCG T 402 hqPGS_C10HBa0115K16.1+_SGN-E258181+ (142451 142759) ******************************************************************************** EST sequence 95 +strand 816 n (File: SGN-E546067+) 1 CGTTGCCTCT CCATTGAGCT TGTCGCCGAC CATTCCATCA CTTACTGTGA AGACCTAGTT 61 TCCGTCGTTG ATTCCTGAGA ACTCCAATTA TCAATTTTGA ACAGTTTCAA TCCAGATGAT 121 GTTGTGGAGA TCATTTCTCA GTCAATCAAA GATCTCTATA GAGATGCTTT TCCTACTTGG 181 GGCAAGATGC CAAGCAATCT CAAGAGACAA ATATTTTTGG AGTTTAGAAA CAATGTGCTT 241 GGCATCTGGA ACATGAGGCC AAAATTTGTG CAAACTTTCA CAAGAAAGTT ACGCGTGTTC 301 TTGCTAGTTT GTTGAATAAA GCTCGTAAAA ATGATCAAAA ACCTAAGTGG ATTCTATAGG 361 ATGATTGGAA AAAATTACTT GTGCATTGGG AAAATGATTC AAGATTTAAG CAGATGAGCG 421 AGATCGGTGT GAAGGCTAGA TCATCTATTA AGGGTGGTTC TCTACACCAA GTGGGGCTCA 481 AAGTCAAGGA AGTGTGAGGA GGAAATTGGA AAAGGAACTA GGAAGACCAG TAACTCAAGC 541 TGAGGCATTC AAGGCAACAC ACATAAGAAA GAAGAAAAAT ACCGAAGATC CAGACGTGTG 601 GATTGAGCCG CGAGCTGAAG TGATCATGAA ATTTGTCCAA AGCCAAATGC GGAGATTTTG 661 AGAGAAGAAA TGCAGAAGAG ACCACCTATG GAGCTGATGA CGGTCCGTCG TGCTTGTGAC 721 GGTCCGTAGG TGGCAGTGTA GAGAAGTTGC TGAAAGAAGA TGGGGGAGTC TGACCAAGTG 781 TGGGATTACG AAGCTTGTGA CGGTCCGTCA TGGCTA Predicted gene structure (within gDNA segment 135417 to 143247): Exon 1 142451 142637 ( 187 n); cDNA 630 816 ( 187 n); score: 0.906 MATCH C10HBa0115K16.1+ SGN-E546067+ 0.906 187 0.229 C PGS_C10HBa0115K16.1+_SGN-E546067+ (142451 142637) Alignment (genomic DNA sequence = upper lines): AATCTGTCCA AAGATGAATG CGGAGATTTT GAG-CAAAAA ATGCAGAAGA GACCACCCTA 142509 ||| |||||| ||| |||| |||||||||| ||| || || |||||||||| ||||| |||| AATTTGTCCA AAGCCAAATG CGGAGATTTT GAGAGAAGAA ATGCAGAAGA GACCA-CCTA 688 CGGAGCTTAT GACGGTCCGC CGTGCCTCTG ACGGTCCGTA GGTGGCAGCG TAGAGAAGTT 142569 |||||| || ||||||||| ||||| | || |||||||||| |||||||| | |||||||||| TGGAGCTGAT GACGGTCCGT CGTGCTTGTG ACGGTCCGTA GGTGGCAGTG TAGAGAAGTT 748 GCTGAAGGAA GATGGGGAAG TCTGACCAAG TGTGGGATTA CGAAGCTTGT GACGGTCCGT 142629 |||||| ||| ||||||| || |||||||||| |||||||||| |||||||||| |||||||||| GCTGAAAGAA GATGGGGGAG TCTGACCAAG TGTGGGATTA CGAAGCTTGT GACGGTCCGT 808 CATGGCTA 142637 |||||||| CATGGCTA 816 hqPGS_C10HBa0115K16.1+_SGN-E546067+ (142451 142637) ******************************************************************************** EST sequence 107 +strand 758 n (File: SGN-E349968+) 1 AGCTTGTGAC GGTCCGTAAG TGGCATCGTA GTGAAGCTGC TGAAGGAAGA TGGGGAAGTC 61 TGACCAAGTG TGGGGTTATG GAGAGTGTGA CGGACCGTCG TAGCCATGGT GGTCTGTCCT 121 GCTAGTTCGT CATGAAGATC AAAGAAGTAG TCCCAATACC CAAATTCCAA GAATTCAAGT 181 GTTATGGAAT GAAGACCCTC GACGGACCGT TGTGCCTGTG ATGATCCGTC ATACCTGCCG 241 TCGTGGATAA TAAAGAGACC AACAGAAGAC TTTGCATAGG TATGGGATGT CGGAGTCCAT 301 TATGGCCCAT CGTGACCATG ACGACCCGTC GCGAGGTCCG TCGACCTAGC CGCATTTTGA 361 CAGATTTCCA GCCAAGAGGG TCCTTCTCTA ATTAGGTTTT TGTTTTTTAT AAATAATTTG 421 AAAAACCTTG TTTTTAGTTT TAGACTCTTT GGTGATTAGA CTCTCTTATA GTTAGACTTT 481 GGTTATTTTA GCTTCTTTTG TGGATTAGAC TTGGTAATTT TTATTACACT CTTGGAGAAT 541 CTTTAGTCTT CAATTAATTT TAGTAATTAA TTTTTGGTGA TTTTGTTGAT TAATCAAGTG 601 AACTTCTTGA TTATTTTCTT TCTTATTGAA GTAAGTGCAT GAATTCTTAT ATTACATATT 661 TGAATATTGT GATTATGACT ATGTGTAACT AAACTCCATA ACTANGGTTG TGGGAACACA 721 GGCGAATAAT GAGGTAAACC CTACTAAAAA ATAATTCT Predicted gene structure (within gDNA segment 141599 to 144325): Exon 1 142533 143035 ( 503 n); cDNA 2 504 ( 503 n); score: 0.786 MATCH C10HBa0115K16.1+ SGN-E349968+ 0.786 503 0.664 C PGS_C10HBa0115K16.1+_SGN-E349968+ (142533 143035) Alignment (genomic DNA sequence = upper lines): GCCTCTGACG GTCCGTAGGT GGCAGCGTAG AGAAGTTGCT GAAGGAAGAT GGGGAAGTCT 142592 || | ||||| ||||||| || |||| ||||| |||| |||| |||||||||| |||||||||| GCTTGTGACG GTCCGTAAGT GGCATCGTAG TGAAGCTGCT GAAGGAAGAT GGGGAAGTCT 61 GACCAAGTGT GGGATTACGA AGCTTGTGAC GGTCCGTCAT GGCTATGACG GTCCGTCCTA 142652 |||||||||| ||| ||| | || |||||| || ||||| | || ||| | ||| ||||| GACCAAGTGT GGGGTTATGG AGAGTGTGAC GGACCGTCGT AGCCATGGTG GTCTGTCCTG 121 CAGGTTCGTC GTGAAGATCA GAGAAGTGAT CCCAGTACTC AGATTCCAAG AGTTGTAGTA 142712 | ||||||| ||||||||| |||||| | |||| ||| | | |||||||| | || ||| CTAGTTCGTC ATGAAGATCA AAGAAGTAGT CCCAATACCC AAATTCCAAG AATTCAAGTG 181 TTTTGAAACG -AGACCCTCG ATGGACCGTT GTGCCTATGA CGGTCCGTCA CACTTGCCGT 142771 || || || | ||||||||| | |||||||| |||||| ||| | ||||||| || |||||| TTATGGAATG AAGACCCTCG ACGGACCGTT GTGCCTGTGA TGATCCGTCA TACCTGCCGT 241 CGAGGGGAAT GAAGAAAGCA GCAGAAGAAA TTGCACCAAG TATGGGACGA CGGAGTCCAC 142831 || || ||| |||| | || ||||||| ||||| | | ||||||| | ||||||||| CGTGGATAAT AAAGAGACCA ACAGAAGACT TTGCA-TAGG TATGGGATGT CGGAGTCCAT 300 GACGATCCGT CATGACCACG ACGGTCCGTC GCGTGGTCCG TCGACCCAGC CGCATTTTGG 142891 | | || | | |||||| | ||| ||||| ||| |||||| |||||| ||| ||||||||| TATGGCCCAT CGTGACCATG ACGACCCGTC GCGAGGTCCG TCGACCTAGC CGCATTTTGA 360 CAGATTTCTA GTAATTAGAA TCCTTCTTTA ATTAAGTTTT TATTTTTTTA TAAATAGTTC 142951 |||||||| | | | || ||||||| || |||| ||||| | ||||||| |||||| || CAGATTTCCA GCCAAGAGGG TCCTTCTCTA ATTAGGTTTT T-GTTTTTTA TAAATAATTT 419 GAAAAACCTC GTTTTTGAGG TTAGACTC-T GGGAGATTAG AC-ATCATAT TATTAGACTT 143009 ||||||||| |||||| |||||||| | || |||||| || || ||| |||||||| GAAAAACCTT GTTTTTAGTT TTAGACTCTT TGGTGATTAG ACTCTCTTAT AGTTAGACTT 479 TGTTTATTAG TGTTTGATTT TTTGGA 143035 || ||||| | || ||| | |||| TGGTTATTTT AGCTT-CTTT TGTGGA 504 hqPGS_C10HBa0115K16.1+_SGN-E349968+ (142533 143035) ******************************************************************************** EST sequence 180 -strand 574 n (File: SGN-E550629-) 1 GGAACGAAGA CCCTCGACGG ACCGTTGTGC CTACGACGGT CCGTCATACA TGCCGTCGAG 61 GGTAATGAAG AGAGCAGCAA AAGAAATTGC ATAAGTATGG GACAACGGAG TCCATGACGG 121 TCTGTCGTGA CCACGACGAT CCGTCGTGAG GTCCGTCGAC CCAGCCGCGT TTTGGCAGAT 181 TTCCAGCAAA TATAGTCCTT GTTTAATTAG GTTTTTATTT TCTATAAATA GTTCTAAAAA 241 CATCATTTTT GAGGTAAGAC TCTGGATCAT TGTTAGACTC CGTATTGTTA GACATCGTAT 301 AAGAAAACAT TTTATTGTTA GACTTTTGAT TATCATTAAT TGTTGGTGAT TTTTTGTGAT 361 AAATCAAGAA AACTCTCAGA TTTTACTCTT TCTCTTTGAA TTAAGTACAT GAATTCTTAT 421 ATGATATATT TGAATATTGT GATTATGACT ATGGTTAACT AAACTCCATA ACTAGGATTG 481 TGGGAACCAT AGGAGAATAT TGAGGTAAAA CCTAACTAAA ATAACAATTC TAGAATAGTG 541 TCTTGCATGT ATTAATAATT CTTTGGCTCA AAAG Predicted gene structure (within gDNA segment 138483 to 143965): Exon 1 142717 143275 ( 559 n); cDNA 2 574 ( 573 n); score: 0.775 MATCH C10HBa0115K16.1+ SGN-E550629- 0.775 559 0.974 C PGS_C10HBa0115K16.1+_SGN-E550629- (142717 143275) Alignment (genomic DNA sequence = upper lines): GAAACGAGAC CCTCGATGGA CCGTTGTGCC TATGACGGTC CGTCACACTT GCCGTCGAGG 142776 ||| |||| |||||| ||| |||||||||| || ||||||| ||||| || | |||||||||| GAACGAAGAC CCTCGACGGA CCGTTGTGCC TACGACGGTC CGTCATACAT GCCGTCGAGG 61 GGAATGAAGA AAGCAGCAGA AGAAATTGCA CCAAGTATGG GACGACGGAG TCCACGACGA 142836 | |||||||| ||||||| | |||||||||| |||||||| ||| |||||| |||| |||| GTAATGAAGA GAGCAGCAAA AGAAATTGCA T-AAGTATGG GACAACGGAG TCCATGACGG 120 TCCGTCATGA CCACGACGGT CCGTCGCGTG GTCCGTCGAC CCAGCCGCAT TTTGGCAGAT 142896 || ||| ||| |||||||| | |||||| | | |||||||||| |||||||| | |||||||||| TCTGTCGTGA CCACGACGAT CCGTCGTGAG GTCCGTCGAC CCAGCCGCGT TTTGGCAGAT 180 TTCTAGTAAT TAGAATCCTT CTTTAATTAA GTTTTTATTT TTTTATAAAT AGTTCGAAAA 142956 ||| || || || | ||||| |||||||| ||||||| || || ||||||| ||||| |||| TTCCAGCAAA TATAGTCCTT GTTTAATTAG GTTTTTA-TT TTCTATAAAT AGTTCTAAAA 239 ACCTCGTTTT TGAGGTTAGA CTCTGG--GA -GATTAGACA TCATATTATT AGAC-T--T- 143009 || || |||| |||||| ||| |||||| | |||||| | |||| || |||| | | ACATCATTTT TGAGGTAAGA CTCTGGATCA TTGTTAGACT CCGTATTGTT AGACATCGTA 299 T--G----TT TATTAGTGTT TGA-TTTT-T TGGAGATT-C TTACAAGTAA TTTTTGGTGA 143060 | | | ||| |||| || |||| | ||| || || | ||||| |||| TAAGAAAACA TTTTATTGTT AGACTTTTGA TTATCATTAA TTGTTGGTGA TTTTTTGTGA 359 TTAATCAAGC AATTTTTCGG ACTTTACTCT TTCTCATTGA AGTAAGTACA TGAATTCTTA 143120 | ||||||| || | || | | |||||||| ||||| |||| | |||||||| |||||||||| TAAATCAAGA AAACTCTCAG ATTTTACTCT TTCTCTTTGA ATTAAGTACA TGAATTCTTA 419 TTTAATATAT TTGAATATTG TGTTTATGGC TATGAGGAAC TAAACTCCAT AACTAGGGTT 143180 | | |||||| |||||||||| || ||||| | |||| ||| |||||||||| ||||||| || TATGATATAT TTGAATATTG TGATTATGAC TATGGTTAAC TAAACTCCAT AACTAGGATT 479 GTGGGAACCA TAGGCAAATA ATGAGATAAA CCCTAGCTAA AAGAACAATT CTAGAATAGT 143240 |||||||||| |||| |||| |||| |||| |||| |||| || ||||||| |||||||||| GTGGGAACCA TAGGAGAATA TTGAGGTAAA ACCTAACTAA AATAACAATT CTAGAATAGT 539 GTCTTGCATG TATTAATAAT TCTTTCACTT AGAAG 143275 |||||||||| |||||||||| ||||| || | ||| GTCTTGCATG TATTAATAAT TCTTTGGCTC AAAAG 574 hqPGS_C10HBa0115K16.1+_SGN-E550629- (142717 143275) ******************************************************************************** EST sequence 182 -strand 574 n (File: SGN-E550645-) 1 GGAACGAAGA CCCTCGTCGG ACCGTTGTGC CTACGACGGT CCGTCATACA TGCCGTCGAG 61 GGTAATGAAG AGAGCAGCAA AAGAAATTGC ATAAGTATGG GACAACGGAG TCCATGACGG 121 TCTGTCGTGA CCACGACGAT CCGTCGTGAG GTCCGTCGAC CCAGCCGCGT TTTGGCAGAT 181 TTCCAGCAAA TATAGTCCTT GTTTAATTAG GTTTTTATTT TCTATAAATA GTTCTAAAAA 241 CATCATTTTT GAGGTAAGAC TCTGGATCAT TGTTAGACTC CGTATTGTTA GACATCGTAT 301 AAGAAAACAT TTTATTGTTA GACTTTTGAT TATCATTAAT TGTTGGTGAT TTTTTGTGAT 361 AAATCAAGAA AACTCTCAGA TTTTACTCTT TCTCTTTGAA TTAAGTACAT GAATTCTTAT 421 ATGATATATT TGAATATTGT GATTATGACT ATGGTTAACT AAACTCCATA ACTAGGATTG 481 TGGGAACCAT AGGAGAATAT TGAGGTAAAA CCTAACTAAA ATAACAATTC TAGAATAGTG 541 TCTTGCATGT ATTAATAATT CTTTGGCTCA AAAG Predicted gene structure (within gDNA segment 138483 to 143965): Exon 1 142717 143275 ( 559 n); cDNA 2 574 ( 573 n); score: 0.773 MATCH C10HBa0115K16.1+ SGN-E550645- 0.773 559 0.974 C PGS_C10HBa0115K16.1+_SGN-E550645- (142717 143275) Alignment (genomic DNA sequence = upper lines): GAAACGAGAC CCTCGATGGA CCGTTGTGCC TATGACGGTC CGTCACACTT GCCGTCGAGG 142776 ||| |||| ||||| ||| |||||||||| || ||||||| ||||| || | |||||||||| GAACGAAGAC CCTCGTCGGA CCGTTGTGCC TACGACGGTC CGTCATACAT GCCGTCGAGG 61 GGAATGAAGA AAGCAGCAGA AGAAATTGCA CCAAGTATGG GACGACGGAG TCCACGACGA 142836 | |||||||| ||||||| | |||||||||| |||||||| ||| |||||| |||| |||| GTAATGAAGA GAGCAGCAAA AGAAATTGCA -TAAGTATGG GACAACGGAG TCCATGACGG 120 TCCGTCATGA CCACGACGGT CCGTCGCGTG GTCCGTCGAC CCAGCCGCAT TTTGGCAGAT 142896 || ||| ||| |||||||| | |||||| | | |||||||||| |||||||| | |||||||||| TCTGTCGTGA CCACGACGAT CCGTCGTGAG GTCCGTCGAC CCAGCCGCGT TTTGGCAGAT 180 TTCTAGTAAT TAGAATCCTT CTTTAATTAA GTTTTTATTT TTTTATAAAT AGTTCGAAAA 142956 ||| || || || | ||||| |||||||| ||||||| || || ||||||| ||||| |||| TTCCAGCAAA TATAGTCCTT GTTTAATTAG GTTTTTA-TT TTCTATAAAT AGTTCTAAAA 239 ACCTCGTTTT TGAGGTTAGA CTCTGG--GA -GATTAGACA TCATATTATT AGAC-T--T- 143009 || || |||| |||||| ||| |||||| | |||||| | |||| || |||| | | ACATCATTTT TGAGGTAAGA CTCTGGATCA TTGTTAGACT CCGTATTGTT AGACATCGTA 299 T--G----TT TATTAGTGTT TGA-TTTT-T TGGAGATT-C TTACAAGTAA TTTTTGGTGA 143060 | | | ||| |||| || |||| | ||| || || | ||||| |||| TAAGAAAACA TTTTATTGTT AGACTTTTGA TTATCATTAA TTGTTGGTGA TTTTTTGTGA 359 TTAATCAAGC AATTTTTCGG ACTTTACTCT TTCTCATTGA AGTAAGTACA TGAATTCTTA 143120 | ||||||| || | || | | |||||||| ||||| |||| | |||||||| |||||||||| TAAATCAAGA AAACTCTCAG ATTTTACTCT TTCTCTTTGA ATTAAGTACA TGAATTCTTA 419 TTTAATATAT TTGAATATTG TGTTTATGGC TATGAGGAAC TAAACTCCAT AACTAGGGTT 143180 | | |||||| |||||||||| || ||||| | |||| ||| |||||||||| ||||||| || TATGATATAT TTGAATATTG TGATTATGAC TATGGTTAAC TAAACTCCAT AACTAGGATT 479 GTGGGAACCA TAGGCAAATA ATGAGATAAA CCCTAGCTAA AAGAACAATT CTAGAATAGT 143240 |||||||||| |||| |||| |||| |||| |||| |||| || ||||||| |||||||||| GTGGGAACCA TAGGAGAATA TTGAGGTAAA ACCTAACTAA AATAACAATT CTAGAATAGT 539 GTCTTGCATG TATTAATAAT TCTTTCACTT AGAAG 143275 |||||||||| |||||||||| ||||| || | ||| GTCTTGCATG TATTAATAAT TCTTTGGCTC AAAAG 574 hqPGS_C10HBa0115K16.1+_SGN-E550645- (142717 143275) ******************************************************************************** EST sequence 240 -strand 385 n (File: SGN-E273427-) 1 AATATAGTCC TTGTTTAATT AGGTTTTTAT TTTCTATAAA TAGTTCTAAA AACATCATTT 61 TTGAGGTAAG ACTCTGGATC ATTGTTAGAC TCCGTATTGT TAGACATCGT ATAAGAAAAC 121 ATTTTATTGT TAGACTTTTG ATTATCATTA ATTGTTGGTG ATTTTTTGTG ATAAATCAAG 181 AAAACTCTCA GATTTTACTC TTTCTCTTTG AATTAAGTAC ATGAATTCTT ATATGATATA 241 TTTGAATATT GTGATTATGA CTATGGTTAA CTAAACTCCA TAACTAGGAT TGTGGGAACC 301 ATAGGAGAAT ATTGAGGTAA AACCTAACTA AAATAACAAT TCTAGAATAG TGTCTTGCAT 361 GTATTAATAA TTCTTTGGCT CAAAA Predicted gene structure (within gDNA segment 140363 to 143955): Exon 1 142971 143274 ( 304 n); cDNA 84 385 ( 302 n); score: 0.796 MATCH C10HBa0115K16.1+ SGN-E273427- 0.796 304 0.790 C PGS_C10HBa0115K16.1+_SGN-E273427- (142971 143274) Alignment (genomic DNA sequence = upper lines): GTTAGACTCT GGGAGATTAG ACATCATATT ATTAGAC-TT TGTTTATTAG -TGTTTGATT 143028 ||||||||| | |||| ||||| ||| | | || || | || |||| ||||||| GTTAGACTCC GTATTGTTAG ACATCGTATA AGAAAACATT TTATTGTTAG ACTTTTGATT 143 TTTTGGAGAT TCTTACAAGT AATTTTTGGT GATTAATCAA GCAATTTTTC GGACTTTACT 143088 | | || | || || |||||| || ||| |||||| | || | || || |||||| ATCATTA-AT TGTT---GGT GATTTTTTGT GATAAATCAA GAAAACTCTC AGATTTTACT 199 CTTTCTCATT GAAGTAAGTA CATGAATTCT TATTTAATAT ATTTGAATAT TGTGTTTATG 143148 ||||||| || ||| |||||| |||||||||| ||| | |||| |||||||||| |||| ||||| CTTTCTCTTT GAATTAAGTA CATGAATTCT TATATGATAT ATTTGAATAT TGTGATTATG 259 GCTATGAGGA ACTAAACTCC ATAACTAGGG TTGTGGGAAC CATAGGCAAA TAATGAGATA 143208 ||||| | |||||||||| ||||||||| |||||||||| |||||| || || |||| || ACTATGGTTA ACTAAACTCC ATAACTAGGA TTGTGGGAAC CATAGGAGAA TATTGAGGTA 319 AACCCTAGCT AAAAGAACAA TTCTAGAATA GTGTCTTGCA TGTATTAATA ATTCTTTCAC 143268 || |||| || |||| ||||| |||||||||| |||||||||| |||||||||| ||||||| | AAACCTAACT AAAATAACAA TTCTAGAATA GTGTCTTGCA TGTATTAATA ATTCTTTGGC 379 TTAGAA 143274 | | || TCAAAA 385 hqPGS_C10HBa0115K16.1+_SGN-E273427- (142971 143274) ******************************************************************************** EST sequence 194 -strand 695 n (File: SGN-E241731-) 1 ATTCTATTAT TAGATATATA TGAATATTGT GATTATGACT ATGGGTAACT AAGCTACATA 61 ACTATGGTTG TGGGAACCAT GGGTGAATAA TGAGGTAAAA TCTAACTAAA ATAACAATTC 121 TAGAATAGTG TCTTGCATGT ATTGATAATT GTTTTGCTTA GAAGTCTTTT TAACGGATGG 181 TCAACATTAG AACTCGCCTT AGTGCTACTT GCCGGACCAA GAAGGTAGAT AATAGCAAAA 241 GAATTATTAA CATAAATTTA GTGTATACTT TTTGATAGGC TAGTATTGAT TGGTACGAGG 301 TAATAACTTA GTCAAATATC GAATACAATG CTTAATATGA GGTAATGGTA AGGGTTTATA 361 TAGCAACACA CGTAGACGGA CCAAGGTGCG TAGTGATATT TTCTAGATGC AAGACCAAGG 421 ATATAGAAAT ACATAACTTA TTACTTTGTA TGCAAGATAC TAGGAAAGAA TTGTTATAGT 481 TAGAATTATT AAATTAGGAA CTTGTGGAGA ACACTTAAAC CCTAGTTAAT TATATTATTT 541 GATTAAATTC CAACATTTGA ATTTGTTAGT TGCCTACTTA AATTTAGCTA GCTATTTCCA 601 TTCATTTAGA ACTAAAACCC CCCTTTTTAT TGTCTTTGTT TTCTAAAGAA ATAATTGACT 661 AACTAATAGT AATAACAAAT TGAAAATAAC TCTGA Predicted gene structure (within gDNA segment 141494 to 146260): Exon 1 143118 143803 ( 686 n); cDNA 7 693 ( 687 n); score: 0.846 MATCH C10HBa0115K16.1+ SGN-E241731- 0.846 686 0.987 C PGS_C10HBa0115K16.1+_SGN-E241731- (143118 143803) Alignment (genomic DNA sequence = upper lines): TTATTTAATA TATTTGAATA TTGTGTTTAT GGCTATGAGG AACTAAACTC CATAACTAGG 143177 ||||| ||| ||| |||||| ||||| |||| | ||||| | |||||| || |||||||| | TTATTAGATA TATATGAATA TTGTGATTAT GACTATGGGT AACTAAGCTA CATAACTATG 66 GTTGTGGGAA CCATAGGCAA ATAATGAGAT AAACCCTAGC TAAAAGAACA ATTCTAGAAT 143237 |||||||||| |||| || | |||||||| | ||| ||| | ||||| |||| |||||||||| GTTGTGGGAA CCATGGGTGA ATAATGAGGT AAAATCTAAC TAAAATAACA ATTCTAGAAT 126 AGTGTCTTGC ATGTATTAAT AATTCTTTCA CTTAGAAGTC TTTTTAACGG ATGATCAACG 143297 |||||||||| ||||||| || |||| ||| |||||||||| |||||||||| ||| ||||| AGTGTCTTGC ATGTATTGAT AATTGTTTTG CTTAGAAGTC TTTTTAACGG ATGGTCAACA 186 TTAGAACTCG CCTTAATGCT ACTTGCCAGA CCAAGGTGGT AGATAATAGG AAACGAAGTA 143357 |||||||||| ||||| |||| ||||||| || ||||| ||| ||||||||| ||| ||| || TTAGAACTCG CCTTAGTGCT ACTTGCCGGA CCAAGAAGGT AGATAATAGC AAAAGAATTA 246 TTAACATAGA TTTAGTGTAT ACTATCTAAT AGGCTAGTAT TGATTGGTAC GAGGTAATAA 143417 |||||||| | |||||||||| ||| | | || |||||||||| |||||||||| |||||||||| TTAACATAAA TTTAGTGTAT ACTTTTTGAT AGGCTAGTAT TGATTGGTAC GAGGTAATAA 306 CTTAGTCAAA TATCGAATAC GATGCTTAAT ATGAGGTAAA GATAAGGGTT AGGAAAGCAA 143477 |||||||||| |||||||||| ||||||||| ||||||||| | |||||||| | ||||| CTTAGTCAAA TATCGAATAC AATGCTTAAT ATGAGGTAAT GGTAAGGGTT TATATAGCAA 366 CACACGTAGC CGGACCAAGG TGCGGAGTGA GATTTTCTAG ATGCCGGACC AAGGATTTAG 143537 ||||||||| |||||||||| |||| ||||| ||||||||| |||| |||| |||||| ||| CACACGTAGA CGGACCAAGG TGCGTAGTGA TATTTTCTAG ATGCAAGACC AAGGATATAG 426 AAATACATAA CTTATCACTT TGCATGCAAG ATACTAGGAA AGAATTGTTA TAGTTAGAAT 143597 |||||||||| ||||| |||| || ||||||| |||||||||| |||||||||| |||||||||| AAATACATAA CTTATTACTT TGTATGCAAG ATACTAGGAA AGAATTGTTA TAGTTAGAAT 486 TATCAAGTTA TGAACCTGCG GGGAACACGT AAACCCTAGT TACTTTGATT AATTGATTAA 143657 ||| || ||| |||| || | | |||||| | |||||||||| || || ||| | |||||||| TATTAAATTA GGAACTTGTG GAGAACACTT AAACCCTAGT TAATTATATT ATTTGATTAA 546 AACCCAACAT TAAAAGCTGT TAAGTGTCTC TTTCAAGTCC GTTAGTTATT TTTACTCATT 143717 | ||||||| | || ||| || || || || || | | ||| |||| | | ||||| ATTCCAACAT TTGAATTTGT TAGTTGCCTA CTTAAATTTA GCTAGCTATT TCCATTCATT 606 AGGAAATACA AACCCCCTTT TTA-TGCTTT TACTTTCTAA GGAAGTCATC AACCGAACAA 143776 ||| || | | |||||||| ||| || || | ||||||| ||| | || || | || TAGAACTAAA ACCCCCCTTT TTATTGTCTT TGTTTTCTAA AGAAATAATT GACTAACTAA 666 TAGTAATAAC AAGTTGAAGT TAAGTCT 143803 |||||||||| || ||||| ||| ||| TAGTAATAAC AAATTGAAAA TAACTCT 693 hqPGS_C10HBa0115K16.1+_SGN-E241731- (143118 143803) ******************************************************************************** EST sequence 66 +strand 719 n (File: SGN-E332633+) 1 TCTATTATAC ACTTGTATCC TTTTCCCATT TCCAAACATC CGAGTGTAGA GTTGGAAAAT 61 TTTGGTGGAT ATTGAAGAAA ATGCTGAATG ATGAAGTAGT GTTACATCCA TGAAAGGTAT 121 ATCTTTCTCA CAAACACTAT CAGCCTTTGC ACTAACATAC ATTGGCTGTG CTACATGTAA 181 CAGCTACGTC AAACCCACAA TTGTTGCTAA GAAGAGCAAC AATTCCCACA CACCCTCTGC 241 TAAGGATACT GATATGCCCC CTCCAAGGAT TACATCAAAA TTGAAGCAGA ATTTGCAGTT 301 CCTAAAATTA TGGAAGGAGT TCCAAAAGAG AAAATCCAGT ACTCCAAAGC CTGCTACTAG 361 TTATCGTAAG AAGAAGGTGG AGAAGGAAGA ACTGCCTGAC GATGAAGAGA TCTACCGCGA 421 TCCTACATTG GCACTATACT ATACAAATCA GGTATTAGAT ACTGTTGTTC CAGTCTTGCT 481 TGTTGATGGA TATAATGTGT GTGGATATTG GCCAAAGTTG AAGAAGCATT TTATGAATGG 541 AAGCCTTGAC ATTGCTCGTC AAAAACTCAT TGATGAACTT GTATCATTCA GTTTGCTAAG 601 AGAGGTGAAA GTGGTGGTGG GGTTTGATGC TATGATGTCT GGAATGGCTA CACACAAAGA 661 AGACTTTGAC GGTGTTGATA TAGTATATTC AAGTGAAACA TGTGCTGATG CATGGATTG Predicted gene structure (within gDNA segment 145730 to 150653): Exon 1 146330 146573 ( 244 n); cDNA 1 244 ( 244 n); score: 1.000 Intron 1 146574 148278 (1705 n); Pd: 1.000 (s: 1.00), Pa: 0.985 (s: 1.00) Exon 2 148279 148350 ( 72 n); cDNA 245 316 ( 72 n); score: 1.000 Intron 2 148351 148436 ( 86 n); Pd: 0.987 (s: 1.00), Pa: 0.853 (s: 1.00) Exon 3 148437 148561 ( 125 n); cDNA 317 441 ( 125 n); score: 1.000 Intron 3 148562 148660 ( 99 n); Pd: 0.986 (s: 1.00), Pa: 0.869 (s: 1.00) Exon 4 148661 148821 ( 161 n); cDNA 442 602 ( 161 n); score: 1.000 Intron 4 148822 149409 ( 588 n); Pd: 0.742 (s: 1.00), Pa: 0.958 (s: 0.98) Exon 5 149410 149479 ( 70 n); cDNA 603 672 ( 70 n); score: 0.957 Intron 5 149480 149996 ( 517 n); Pd: 0.988 (s: 0.96), Pa: 0.941 (s: 1.00) Exon 6 149997 150043 ( 47 n); cDNA 673 719 ( 47 n); score: 1.000 MATCH C10HBa0115K16.1+ SGN-E332633+ 0.996 719 1.000 C PGS_C10HBa0115K16.1+_SGN-E332633+ (146330 146573,148279 148350,148437 148561,148661 148821,149410 149479,149997 150043) Alignment (genomic DNA sequence = upper lines): TCTATTATAC ACTTGTATCC TTTTCCCATT TCCAAACATC CGAGTGTAGA GTTGGAAAAT 146389 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCTATTATAC ACTTGTATCC TTTTCCCATT TCCAAACATC CGAGTGTAGA GTTGGAAAAT 60 TTTGGTGGAT ATTGAAGAAA ATGCTGAATG ATGAAGTAGT GTTACATCCA TGAAAGGTAT 146449 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTGGTGGAT ATTGAAGAAA ATGCTGAATG ATGAAGTAGT GTTACATCCA TGAAAGGTAT 120 ATCTTTCTCA CAAACACTAT CAGCCTTTGC ACTAACATAC ATTGGCTGTG CTACATGTAA 146509 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATCTTTCTCA CAAACACTAT CAGCCTTTGC ACTAACATAC ATTGGCTGTG CTACATGTAA 180 CAGCTACGTC AAACCCACAA TTGTTGCTAA GAAGAGCAAC AATTCCCACA CACCCTCTGC 146569 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAGCTACGTC AAACCCACAA TTGTTGCTAA GAAGAGCAAC AATTCCCACA CACCCTCTGC 240 TAAGGTATCA TATCCTTATC CTACACTAAT TTTACATTTG TGATTGAGGT ACTAATTCTT 146629 |||| TAAG...... .......... .......... .......... .......... .......... 244 TGTTTATGTT GATACTTTAA TGAGTAGAAA AGGATAAATC ATCAGTTGAC GGATGTTCAT 146689 .......... .......... .......... .......... .......... .......... 244 TATGTAATAT GGTCATCACT CTCTTCCAAT TCAAAATCTA GGGGTTCGAG TTTGAAATTA 146749 .......... .......... .......... .......... .......... .......... 244 GACCAAGCCC TTCTGATTTA GTGTGTCCGA AATCTATTAT ATTCACTTAA AAAATTAAAA 146809 .......... .......... .......... .......... .......... .......... 244 AAAAAAGAGT TATTATTGTT GGCTGAATAT CAGCCATATA TATAAAGTAA GAGTCTTTTT 146869 .......... .......... .......... .......... .......... .......... 244 ATTTTTGTCG TCTTGCGTCG GCTGAAAAAA GGCAAATGTA CAAAAGTCGT AAAGTAAATA 146929 .......... .......... .......... .......... .......... .......... 244 GTTTGTCGGC CAATTATGTA AAGTAAATAG TATGACGGTG TAATTTATGT GTATAAATAG 146989 .......... .......... .......... .......... .......... .......... 244 AGGAGCTTTC CTCATAAATA AAACACACCT TCATCCTTAC ATCTCTCTTC TTTCTGAATA 147049 .......... .......... .......... .......... .......... .......... 244 CTCTCTCTTT ACGCTTCCAC CCCAAAATTG GTATTCATTC AATTAAGGAA AGGAAAATAA 147109 .......... .......... .......... .......... .......... .......... 244 ATTCTACAAG TGATTTTGGG TTGTCCAGTC AGTTCTCCCT TTTTTTGAGG AATGTAAAAG 147169 .......... .......... .......... .......... .......... .......... 244 ATTGCTTGCA GTATGATGTA AATAAACACA TTAATGATAA CTAGAGGGAA GATTGTATAA 147229 .......... .......... .......... .......... .......... .......... 244 CTGGACTTAA GAATTATCTA GGAAAAATAG ATAAAACATG AGTAATAGGA TATGAAACAT 147289 .......... .......... .......... .......... .......... .......... 244 AGTTTTGCTT TGATCATGGC CCAGCATTCT CACTATAGAA GGACCCTAAA TGTTCATTGT 147349 .......... .......... .......... .......... .......... .......... 244 GATATTCAGC AGTTTGAAAA TAAGCACTTC CTCAGTTATT TTATGTGTAT TTGTTTGATG 147409 .......... .......... .......... .......... .......... .......... 244 GGAAATAAGA AAATTTTGAA TATTGAGGTC TTTAAACTAA AGACATGTAT AATGTATGCC 147469 .......... .......... .......... .......... .......... .......... 244 TTTTGAATCC TGGGGTCTTA AGCATGCTAT GTAGTATATT GAATTAAAGA GTTACTAAAT 147529 .......... .......... .......... .......... .......... .......... 244 ATAAAAAGTG TACCTTTTTA TAAACAAACT AAAAATGGAA GTAACACACA TAAACGAAAT 147589 .......... .......... .......... .......... .......... .......... 244 AGAGGGAATA GTACTTTTTG TTGATGATAT CATGAGATAG AACCTTACAG AAGTTGGCAT 147649 .......... .......... .......... .......... .......... .......... 244 CATTTTTCTA CCAAAAGACA AAGATTACAT TTTGATTTAT GAATTACTCT AATTGGTTTG 147709 .......... .......... .......... .......... .......... .......... 244 CTTGTTAGCA ATCACATATC TTTATGTTAT CCATAGGGCG AGTTATCAGA AAGGATAGAA 147769 .......... .......... .......... .......... .......... .......... 244 GTTATGAAGA AACACTAGCT CGCTTTGTCA GACATATAGG TAGTCCATTT GCTTTGATGT 147829 .......... .......... .......... .......... .......... .......... 244 GATTGGAAAT GCTCTTCTGC CTATCGATTG TTTTTAAATG AAATAATTTT GCTGCTGTAT 147889 .......... .......... .......... .......... .......... .......... 244 CTCTACGTTG CTCACAACTG GATATATATC ATTTGTATGG CCACTAGACA TGCAAGTGCT 147949 .......... .......... .......... .......... .......... .......... 244 AGAAGTTGAT TTTAGGAGTA ATTTTCATTA AGGGCTGGAG CTAGTCAAAC TAAAAAGTTG 148009 .......... .......... .......... .......... .......... .......... 244 TTTGGGAATC ATTCAAAAGT AAAACTGAGA AATTCTTAAA TTGGACACAA CAGTTTTTGG 148069 .......... .......... .......... .......... .......... .......... 244 GATGTCATGG GATACCAAAC CATGTATTAA TCCATCGACT GGAAATGTGT CTTAGTATGC 148129 .......... .......... .......... .......... .......... .......... 244 CAATCTTTCC TATTTTTTAA AACTATATTT GCTTACTTTG TTGAAATGTT TTGATAATTC 148189 .......... .......... .......... .......... .......... .......... 244 CACCTAGAAC TGACAAGATA ATCATGTAAT TTGAATGTCC TGCTGAATAA TTTAAATCTA 148249 .......... .......... .......... .......... .......... .......... 244 ATAAACTTTA CTTATTCGAC TTCAAATAGG ATACTGATAT GCCCCCTCCA AGGATTACAT 148309 | |||||||||| |||||||||| |||||||||| .......... .......... .........G ATACTGATAT GCCCCCTCCA AGGATTACAT 275 CAAAATTGAA GCAGAATTTG CAGTTCCTAA AATTATGGAA GGTCAGTCTT ATATTAATAT 148369 |||||||||| |||||||||| |||||||||| |||||||||| | CAAAATTGAA GCAGAATTTG CAGTTCCTAA AATTATGGAA G......... .......... 316 CAATGGACCC TGTTACGAGA TCTAGTATAT TATTTTCTGC AATTCATATG GTGGAAATTT 148429 .......... .......... .......... .......... .......... .......... 316 ATTTTAGGAG TTCCAAAAGA GAAAATCCAG TACTCCAAAG CCTGCTACTA GTTATCGTAA 148489 ||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| .......GAG TTCCAAAAGA GAAAATCCAG TACTCCAAAG CCTGCTACTA GTTATCGTAA 369 GAAGAAGGTG GAGAAGGAAG AACTGCCTGA CGATGAAGAG ATCTACCGCG ATCCTACATT 148549 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAAGAAGGTG GAGAAGGAAG AACTGCCTGA CGATGAAGAG ATCTACCGCG ATCCTACATT 429 GGCACTATAC TAGTAAATAT TTTTCCAGGT CTTGTCTAGA ATGATTTTTT TGTTTAGTAA 148609 |||||||||| || GGCACTATAC TA........ .......... .......... .......... .......... 441 ACATCATGTG GGTGAATTGA CAAACTGCTT GTTTTTTTTA AATTTCTGTA GTACAAATCA 148669 ||||||||| .......... .......... .......... .......... .......... .TACAAATCA 450 GGTATTAGAT ACTGTTGTTC CAGTCTTGCT TGTTGATGGA TATAATGTGT GTGGATATTG 148729 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGTATTAGAT ACTGTTGTTC CAGTCTTGCT TGTTGATGGA TATAATGTGT GTGGATATTG 510 GCCAAAGTTG AAGAAGCATT TTATGAATGG AAGCCTTGAC ATTGCTCGTC AAAAACTCAT 148789 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCCAAAGTTG AAGAAGCATT TTATGAATGG AAGCCTTGAC ATTGCTCGTC AAAAACTCAT 570 TGATGAACTT GTATCATTCA GTTTGCTAAG AGGTTTGGGT CTTTTTATCC TTCGATGAGC 148849 |||||||||| |||||||||| |||||||||| || TGATGAACTT GTATCATTCA GTTTGCTAAG AG........ .......... .......... 602 CTGTTCCTAT GTTGCATTAA AGCTTGTTAG AGCACATGTG GTCTTGTCTA GCTCTAGACT 148909 .......... .......... .......... .......... .......... .......... 602 CAAATGAATA AAGTTGTCTT CGTGTGACTT ATATGTCATG GATTTGATCC GTGGAATCAG 148969 .......... .......... .......... .......... .......... .......... 602 CCACTAATAC TTGTATTAGG GAGGCTGCCT ACATCTTACT TCCTTGGTGT GAGGCCCTTC 149029 .......... .......... .......... .......... .......... .......... 602 CACTATTCTG CATGAATGCG GTATGCTATA TGCACTGGGC TGCTTTTTTT ATATGTGCAT 149089 .......... .......... .......... .......... .......... .......... 602 CTCAATAATC ACTTGAAAGG CTCATAACTA TCCTTGCAGT GAATTCCTTC TGATACTTTT 149149 .......... .......... .......... .......... .......... .......... 602 ATTTTCTGAA GTAGTTTATC TGATACAGAT TCTGCTATTC TTTTTTTCTT TTAGATGACT 149209 .......... .......... .......... .......... .......... .......... 602 TTTTTTCTAG CTATTGTAAT ATGATTCTGC TAGCTGTAGC AGTTTTCTTC TGTTTTTAAT 149269 .......... .......... .......... .......... .......... .......... 602 CAGATTATTA GCATCTCGCA CATTGAAATG AGCTGGTAGA AATCCTATAT TGTCAAAAAT 149329 .......... .......... .......... .......... .......... .......... 602 AGTTGCTCTT TATATACTTT ATTCATGTCT AATAACTTGT CAATTGGTGA ATGTTGCCAT 149389 .......... .......... .......... .......... .......... .......... 602 CTCATTTCAG TATATTGCAG AGGTGAAAGT GGTGGTGGTG TTTGATGCTA TGATGTCTGG 149449 |||||||||| |||||||| | |||||||||| |||||||||| .......... .......... AGGTGAAAGT GGTGGTGGGG TTTGATGCTA TGATGTCTGG 642 AATGGCTACA CACAAGGAAG ACTTTGAGGG GTAATTACAT TAGACAATGA AAAACAACCC 149509 |||||||||| ||||| |||| ||||||| || AATGGCTACA CACAAAGAAG ACTTTGACGG .......... .......... .......... 672 CATAGTTACC TTCTGTGGAT ATTTTTCTGT CTTACAGACA GGCTCTTGGA ATTTGCTATT 149569 .......... .......... .......... .......... .......... .......... 672 ATTTTTCTGC TCGTCTGTCA TTACTGTAGT TTCACATGAA ATCAGATTCT TGTCCTCCTT 149629 .......... .......... .......... .......... .......... .......... 672 TCAATAGGTA ATATGTAAAT GTGCTGTTGC ATACTAATGC TATATGGAAT GGAATTATGA 149689 .......... .......... .......... .......... .......... .......... 672 GTATTGAGCA TACTTTCAAG GATTTTTTAG TTGTATTTAT TTTCAGCCTC TATATTTTCC 149749 .......... .......... .......... .......... .......... .......... 672 CACTTTTGAG ATGTTCTGGT GACTAAAGAA GAAATCTGAT TTCATTATCA TATTTATCAT 149809 .......... .......... .......... .......... .......... .......... 672 GTTCATTGAT ATCTGATGCA GAAACCAAAC ATCTTATGGT CAGTTTTCTA ATGACAGATT 149869 .......... .......... .......... .......... .......... .......... 672 ACTTATACAT CTACCTCTCA ATTTCTTAGT TCTTGGATCA ATCTACTTGT CCTGTTGAAC 149929 .......... .......... .......... .......... .......... .......... 672 TCTTGAATGC AATCTAGACT AGACTGTTTA GTAGTAGAGT TCCATGACTC ATTTCTTCAT 149989 .......... .......... .......... .......... .......... .......... 672 TTTGCAGTGT TGATATAGTA TATTCAAGTG AAACATGTGC TGATGCATGG ATTG 150043 ||| |||||||||| |||||||||| |||||||||| |||||||||| |||| .......TGT TGATATAGTA TATTCAAGTG AAACATGTGC TGATGCATGG ATTG 719 hqPGS_C10HBa0115K16.1+_SGN-E332633+ (146330 146573,148279 148350,148437 148561,148661 148821,149410 149479,149997 150043) ******************************************************************************** EST sequence 168 -strand 731 n (File: SGN-E550037-) 1 AAAGTATATA AGTATTGTTG TTCGGTTGAA TATCAGGCAT ATGTATAAAG TAAGAGTCTT 61 CTTATTTTTG TCGTCTTGCG TCGGCTGAAA AAGTCAAATG TACAAAAGTC GTAAAGTAAA 121 TAGTTGTCGG GCCAATCATG TAAAAAGTTT GTCGGCCAAT TATGTAAAGT AAATAGTATG 181 ACGGTGTAAT TTATGTGTAT AAATAGAGGA GCTTTCCTCA TAAATAAAAC ACACCTTCAT 241 CCTTACATCT CTCATCTTTC TGAATACTCT CTCTTTACGC TTGCACCCCA AAATTGGTAT 301 CAGAGCTAGA TAGTTAACAA AATAAGCTAA TAACTATGGA GAAATCCGAA GCTACAAATC 361 TACAAAATCA GGTATATACT ATTAAATTTA TGAGTAGCTA AATTTTATTT ATTCCTGAAA 421 ATCTCTTGTT GATTATAATT GTTTATCATG ACTTAATAAT ACTTTAATAA GCATCTTTAG 481 AAGGTTTACT ACAGAAATAT TCTCTGAATG AGTATGCCCA GACTATGTCA TCCTAAGGTT 541 GAAACCGGTA GGCAAGAGGG CCGTTTAGGG GAGTAAACAA AGTTGAGGCG CTGTTAGGGT 601 AACTAATAAA AGAAGAAAGC TGTAGTGGTG ACTAGACGAG ATGATTATTA AATCATTATT 661 ATTTCGTAAT AAATAAGTAT AATCCATTAA GAGCTTGGAA GGAATAAAAC TTTTAGCAAA 721 AATGAGGAAG A Predicted gene structure (within gDNA segment 145810 to 151993): Exon 1 146924 147079 ( 156 n); cDNA 141 296 ( 156 n); score: 0.981 Intron 1 147080 147615 ( 536 n); Pd: 0.443 (s: 0.96), Pa: 0.000 (s: 0) Exon 2 147616 147641 ( 26 n); cDNA 297 322 ( 26 n); score: 0.635 Intron 2 147642 149830 (2189 n); Pd: 0.057 (s: 0), Pa: 0.822 (s: 0) Exon 3 149831 149838 ( 8 n); cDNA 323 330 ( 8 n); score: 0.625 MATCH C10HBa0115K16.1+ SGN-E550037- 0.981 190 0.260 C PGS_C10HBa0115K16.1+_SGN-E550037- (146924 147079,147616 147641,149831 149838) Alignment (genomic DNA sequence = upper lines): TAAATAGTTT GTCGGCCAAT TATGTAAAGT AAATAGTATG ACGGTGTAAT TTATGTGTAT 146983 |||| ||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAAAAAGTTT GTCGGCCAAT TATGTAAAGT AAATAGTATG ACGGTGTAAT TTATGTGTAT 200 AAATAGAGGA GCTTTCCTCA TAAATAAAAC ACACCTTCAT CCTTACATCT CTCTTCTTTC 147043 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||| |||||| AAATAGAGGA GCTTTCCTCA TAAATAAAAC ACACCTTCAT CCTTACATCT CTCATCTTTC 260 TGAATACTCT CTCTTTACGC TTCCACCCCA AAATTGGTAT TCATTCAATT AAGGAAAGGA 147103 |||||||||| |||||||||| || ||||||| |||||| TGAATACTCT CTCTTTACGC TTGCACCCCA AAATTG.... .......... .......... 296 AAATAAATTC TACAAGTGAT TTTGGGTTGT CCAGTCAGTT CTCCCTTTTT TTGAGGAATG 147163 .......... .......... .......... .......... .......... .......... 296 TAAAAGATTG CTTGCAGTAT GATGTAAATA AACACATTAA TGATAACTAG AGGGAAGATT 147223 .......... .......... .......... .......... .......... .......... 296 GTATAACTGG ACTTAAGAAT TATCTAGGAA AAATAGATAA AACATGAGTA ATAGGATATG 147283 .......... .......... .......... .......... .......... .......... 296 AAACATAGTT TTGCTTTGAT CATGGCCCAG CATTCTCACT ATAGAAGGAC CCTAAATGTT 147343 .......... .......... .......... .......... .......... .......... 296 CATTGTGATA TTCAGCAGTT TGAAAATAAG CACTTCCTCA GTTATTTTAT GTGTATTTGT 147403 .......... .......... .......... .......... .......... .......... 296 TTGATGGGAA ATAAGAAAAT TTTGAATATT GAGGTCTTTA AACTAAAGAC ATGTATAATG 147463 .......... .......... .......... .......... .......... .......... 296 TATGCCTTTT GAATCCTGGG GTCTTAAGCA TGCTATGTAG TATATTGAAT TAAAGAGTTA 147523 .......... .......... .......... .......... .......... .......... 296 CTAAATATAA AAAGTGTACC TTTTTATAAA CAAACTAAAA ATGGAAGTAA CACACATAAA 147583 .......... .......... .......... .......... .......... .......... 296 CGAAATAGAG GGAATAGTAC TTTTTGTTGA TGATATCATG AGATAGA-AC CTTACAGAAG 147642 ||||| | || |||| | | ||| || .......... .......... .......... ..GTATCA-G AGCTAGATAG TTAACAAAA. 322 TTGGCATCAT TTTTCTACCA AAAGACAAAG ATTACATTTT GATTTATGAA TTACTCTAAT 147702 .......... .......... .......... .......... .......... .......... 322 TGGTTTGCTT GTTAGCAATC ACATATCTTT ATGTTATCCA TAGGGCGAGT TATCAGAAAG 147762 .......... .......... .......... .......... .......... .......... 322 GATAGAAGTT ATGAAGAAAC ACTAGCTCGC TTTGTCAGAC ATATAGGTAG TCCATTTGCT 147822 .......... .......... .......... .......... .......... .......... 322 TTGATGTGAT TGGAAATGCT CTTCTGCCTA TCGATTGTTT TTAAATGAAA TAATTTTGCT 147882 .......... .......... .......... .......... .......... .......... 322 GCTGTATCTC TACGTTGCTC ACAACTGGAT ATATATCATT TGTATGGCCA CTAGACATGC 147942 .......... .......... .......... .......... .......... .......... 322 AAGTGCTAGA AGTTGATTTT AGGAGTAATT TTCATTAAGG GCTGGAGCTA GTCAAACTAA 148002 .......... .......... .......... .......... .......... .......... 322 AAAGTTGTTT GGGAATCATT CAAAAGTAAA ACTGAGAAAT TCTTAAATTG GACACAACAG 148062 .......... .......... .......... .......... .......... .......... 322 TTTTTGGGAT GTCATGGGAT ACCAAACCAT GTATTAATCC ATCGACTGGA AATGTGTCTT 148122 .......... .......... .......... .......... .......... .......... 322 AGTATGCCAA TCTTTCCTAT TTTTTAAAAC TATATTTGCT TACTTTGTTG AAATGTTTTG 148182 .......... .......... .......... .......... .......... .......... 322 ATAATTCCAC CTAGAACTGA CAAGATAATC ATGTAATTTG AATGTCCTGC TGAATAATTT 148242 .......... .......... .......... .......... .......... .......... 322 AAATCTAATA AACTTTACTT ATTCGACTTC AAATAGGATA CTGATATGCC CCCTCCAAGG 148302 .......... .......... .......... .......... .......... .......... 322 ATTACATCAA AATTGAAGCA GAATTTGCAG TTCCTAAAAT TATGGAAGGT CAGTCTTATA 148362 .......... .......... .......... .......... .......... .......... 322 TTAATATCAA TGGACCCTGT TACGAGATCT AGTATATTAT TTTCTGCAAT TCATATGGTG 148422 .......... .......... .......... .......... .......... .......... 322 GAAATTTATT TTAGGAGTTC CAAAAGAGAA AATCCAGTAC TCCAAAGCCT GCTACTAGTT 148482 .......... .......... .......... .......... .......... .......... 322 ATCGTAAGAA GAAGGTGGAG AAGGAAGAAC TGCCTGACGA TGAAGAGATC TACCGCGATC 148542 .......... .......... .......... .......... .......... .......... 322 CTACATTGGC ACTATACTAG TAAATATTTT TCCAGGTCTT GTCTAGAATG ATTTTTTTGT 148602 .......... .......... .......... .......... .......... .......... 322 TTAGTAAACA TCATGTGGGT GAATTGACAA ACTGCTTGTT TTTTTTAAAT TTCTGTAGTA 148662 .......... .......... .......... .......... .......... .......... 322 CAAATCAGGT ATTAGATACT GTTGTTCCAG TCTTGCTTGT TGATGGATAT AATGTGTGTG 148722 .......... .......... .......... .......... .......... .......... 322 GATATTGGCC AAAGTTGAAG AAGCATTTTA TGAATGGAAG CCTTGACATT GCTCGTCAAA 148782 .......... .......... .......... .......... .......... .......... 322 AACTCATTGA TGAACTTGTA TCATTCAGTT TGCTAAGAGG TTTGGGTCTT TTTATCCTTC 148842 .......... .......... .......... .......... .......... .......... 322 GATGAGCCTG TTCCTATGTT GCATTAAAGC TTGTTAGAGC ACATGTGGTC TTGTCTAGCT 148902 .......... .......... .......... .......... .......... .......... 322 CTAGACTCAA ATGAATAAAG TTGTCTTCGT GTGACTTATA TGTCATGGAT TTGATCCGTG 148962 .......... .......... .......... .......... .......... .......... 322 GAATCAGCCA CTAATACTTG TATTAGGGAG GCTGCCTACA TCTTACTTCC TTGGTGTGAG 149022 .......... .......... .......... .......... .......... .......... 322 GCCCTTCCAC TATTCTGCAT GAATGCGGTA TGCTATATGC ACTGGGCTGC TTTTTTTATA 149082 .......... .......... .......... .......... .......... .......... 322 TGTGCATCTC AATAATCACT TGAAAGGCTC ATAACTATCC TTGCAGTGAA TTCCTTCTGA 149142 .......... .......... .......... .......... .......... .......... 322 TACTTTTATT TTCTGAAGTA GTTTATCTGA TACAGATTCT GCTATTCTTT TTTTCTTTTA 149202 .......... .......... .......... .......... .......... .......... 322 GATGACTTTT TTTCTAGCTA TTGTAATATG ATTCTGCTAG CTGTAGCAGT TTTCTTCTGT 149262 .......... .......... .......... .......... .......... .......... 322 TTTTAATCAG ATTATTAGCA TCTCGCACAT TGAAATGAGC TGGTAGAAAT CCTATATTGT 149322 .......... .......... .......... .......... .......... .......... 322 CAAAAATAGT TGCTCTTTAT ATACTTTATT CATGTCTAAT AACTTGTCAA TTGGTGAATG 149382 .......... .......... .......... .......... .......... .......... 322 TTGCCATCTC ATTTCAGTAT ATTGCAGAGG TGAAAGTGGT GGTGGTGTTT GATGCTATGA 149442 .......... .......... .......... .......... .......... .......... 322 TGTCTGGAAT GGCTACACAC AAGGAAGACT TTGAGGGGTA ATTACATTAG ACAATGAAAA 149502 .......... .......... .......... .......... .......... .......... 322 ACAACCCCAT AGTTACCTTC TGTGGATATT TTTCTGTCTT ACAGACAGGC TCTTGGAATT 149562 .......... .......... .......... .......... .......... .......... 322 TGCTATTATT TTTCTGCTCG TCTGTCATTA CTGTAGTTTC ACATGAAATC AGATTCTTGT 149622 .......... .......... .......... .......... .......... .......... 322 CCTCCTTTCA ATAGGTAATA TGTAAATGTG CTGTTGCATA CTAATGCTAT ATGGAATGGA 149682 .......... .......... .......... .......... .......... .......... 322 ATTATGAGTA TTGAGCATAC TTTCAAGGAT TTTTTAGTTG TATTTATTTT CAGCCTCTAT 149742 .......... .......... .......... .......... .......... .......... 322 ATTTTCCCAC TTTTGAGATG TTCTGGTGAC TAAAGAAGAA ATCTGATTTC ATTATCATAT 149802 .......... .......... .......... .......... .......... .......... 322 TTATCATGTT CATTGATATC TGATGCAGAA ACCAAA 149838 | | | || .......... .......... ........TA AGCTAA 330 hqPGS_C10HBa0115K16.1+_SGN-E550037- (146924 147079) ******************************************************************************** EST sequence 184 -strand 637 n (File: SGN-E232987-) 1 TCAAATGTAC AAAAGTCGTA AAGTAAATAG TTTGTCGGCC AATCATGTAA AAAGTTTGTC 61 GGCCAATTAT GTAAAGTAAA TAGTATGACG GTGTAATTTA TGTGTATAAA TAGAGGAGCT 121 TTCCTCATAA ATAAAACACA CCTTCATCCT TACATCTCTC ATCTTTCTGA ATACTCTCTC 181 TTTACGCTTG CACCCCAAAA TTGGTATCAG AGCTAGATAG TTAACAAAAT AAGCTAATAA 241 CTATGGAGAA ATCCGAAGCT ACAAATCTAC AAAATCAGGT ATATACTATT AAATTTATGA 301 GTAGCTAAAT TTTATTTATT CCTGAAAATC TCTTGTTGAT TATAATTGTT TATCATGACT 361 TAATAATACT TTAATAAGCA TCTTTAGAAG GTTTACTACA GAAATATTCT CTGAATGAGT 421 ATGCCCAGAC TATGTCATCC TAAGGTTGAA ACCGGTAGGC AAGAGGGCCG TTTAGGGGAG 481 TAAACAAAGT TGAGGCGCTG TTAGGGTAAC TAATAAAAGA AGAAAGCTGT AGTGGTGACT 541 AGACGAGATG ATTATTAAAT CATTATTATT TCATAATAAA TAAGTATAAT CCATTAAGAG 601 CTTGGAAGGA ATAAAACTTT TAGCAAAAAT GAATAAG Predicted gene structure (within gDNA segment 146282 to 151983): Exon 1 146924 147079 ( 156 n); cDNA 48 203 ( 156 n); score: 0.981 Intron 1 147080 147615 ( 536 n); Pd: 0.443 (s: 0.96), Pa: 0.000 (s: 0) Exon 2 147616 147641 ( 26 n); cDNA 204 229 ( 26 n); score: 0.635 Intron 2 147642 149830 (2189 n); Pd: 0.057 (s: 0), Pa: 0.822 (s: 0) Exon 3 149831 149838 ( 8 n); cDNA 230 237 ( 8 n); score: 0.625 MATCH C10HBa0115K16.1+ SGN-E232987- 0.981 190 0.298 C PGS_C10HBa0115K16.1+_SGN-E232987- (146924 147079,147616 147641,149831 149838) Alignment (genomic DNA sequence = upper lines): TAAATAGTTT GTCGGCCAAT TATGTAAAGT AAATAGTATG ACGGTGTAAT TTATGTGTAT 146983 |||| ||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TAAAAAGTTT GTCGGCCAAT TATGTAAAGT AAATAGTATG ACGGTGTAAT TTATGTGTAT 107 AAATAGAGGA GCTTTCCTCA TAAATAAAAC ACACCTTCAT CCTTACATCT CTCTTCTTTC 147043 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||| |||||| AAATAGAGGA GCTTTCCTCA TAAATAAAAC ACACCTTCAT CCTTACATCT CTCATCTTTC 167 TGAATACTCT CTCTTTACGC TTCCACCCCA AAATTGGTAT TCATTCAATT AAGGAAAGGA 147103 |||||||||| |||||||||| || ||||||| |||||| TGAATACTCT CTCTTTACGC TTGCACCCCA AAATTG.... .......... .......... 203 AAATAAATTC TACAAGTGAT TTTGGGTTGT CCAGTCAGTT CTCCCTTTTT TTGAGGAATG 147163 .......... .......... .......... .......... .......... .......... 203 TAAAAGATTG CTTGCAGTAT GATGTAAATA AACACATTAA TGATAACTAG AGGGAAGATT 147223 .......... .......... .......... .......... .......... .......... 203 GTATAACTGG ACTTAAGAAT TATCTAGGAA AAATAGATAA AACATGAGTA ATAGGATATG 147283 .......... .......... .......... .......... .......... .......... 203 AAACATAGTT TTGCTTTGAT CATGGCCCAG CATTCTCACT ATAGAAGGAC CCTAAATGTT 147343 .......... .......... .......... .......... .......... .......... 203 CATTGTGATA TTCAGCAGTT TGAAAATAAG CACTTCCTCA GTTATTTTAT GTGTATTTGT 147403 .......... .......... .......... .......... .......... .......... 203 TTGATGGGAA ATAAGAAAAT TTTGAATATT GAGGTCTTTA AACTAAAGAC ATGTATAATG 147463 .......... .......... .......... .......... .......... .......... 203 TATGCCTTTT GAATCCTGGG GTCTTAAGCA TGCTATGTAG TATATTGAAT TAAAGAGTTA 147523 .......... .......... .......... .......... .......... .......... 203 CTAAATATAA AAAGTGTACC TTTTTATAAA CAAACTAAAA ATGGAAGTAA CACACATAAA 147583 .......... .......... .......... .......... .......... .......... 203 CGAAATAGAG GGAATAGTAC TTTTTGTTGA TGATATCATG AGATAGA-AC CTTACAGAAG 147642 ||||| | || |||| | | ||| || .......... .......... .......... ..GTATCA-G AGCTAGATAG TTAACAAAA. 229 TTGGCATCAT TTTTCTACCA AAAGACAAAG ATTACATTTT GATTTATGAA TTACTCTAAT 147702 .......... .......... .......... .......... .......... .......... 229 TGGTTTGCTT GTTAGCAATC ACATATCTTT ATGTTATCCA TAGGGCGAGT TATCAGAAAG 147762 .......... .......... .......... .......... .......... .......... 229 GATAGAAGTT ATGAAGAAAC ACTAGCTCGC TTTGTCAGAC ATATAGGTAG TCCATTTGCT 147822 .......... .......... .......... .......... .......... .......... 229 TTGATGTGAT TGGAAATGCT CTTCTGCCTA TCGATTGTTT TTAAATGAAA TAATTTTGCT 147882 .......... .......... .......... .......... .......... .......... 229 GCTGTATCTC TACGTTGCTC ACAACTGGAT ATATATCATT TGTATGGCCA CTAGACATGC 147942 .......... .......... .......... .......... .......... .......... 229 AAGTGCTAGA AGTTGATTTT AGGAGTAATT TTCATTAAGG GCTGGAGCTA GTCAAACTAA 148002 .......... .......... .......... .......... .......... .......... 229 AAAGTTGTTT GGGAATCATT CAAAAGTAAA ACTGAGAAAT TCTTAAATTG GACACAACAG 148062 .......... .......... .......... .......... .......... .......... 229 TTTTTGGGAT GTCATGGGAT ACCAAACCAT GTATTAATCC ATCGACTGGA AATGTGTCTT 148122 .......... .......... .......... .......... .......... .......... 229 AGTATGCCAA TCTTTCCTAT TTTTTAAAAC TATATTTGCT TACTTTGTTG AAATGTTTTG 148182 .......... .......... .......... .......... .......... .......... 229 ATAATTCCAC CTAGAACTGA CAAGATAATC ATGTAATTTG AATGTCCTGC TGAATAATTT 148242 .......... .......... .......... .......... .......... .......... 229 AAATCTAATA AACTTTACTT ATTCGACTTC AAATAGGATA CTGATATGCC CCCTCCAAGG 148302 .......... .......... .......... .......... .......... .......... 229 ATTACATCAA AATTGAAGCA GAATTTGCAG TTCCTAAAAT TATGGAAGGT CAGTCTTATA 148362 .......... .......... .......... .......... .......... .......... 229 TTAATATCAA TGGACCCTGT TACGAGATCT AGTATATTAT TTTCTGCAAT TCATATGGTG 148422 .......... .......... .......... .......... .......... .......... 229 GAAATTTATT TTAGGAGTTC CAAAAGAGAA AATCCAGTAC TCCAAAGCCT GCTACTAGTT 148482 .......... .......... .......... .......... .......... .......... 229 ATCGTAAGAA GAAGGTGGAG AAGGAAGAAC TGCCTGACGA TGAAGAGATC TACCGCGATC 148542 .......... .......... .......... .......... .......... .......... 229 CTACATTGGC ACTATACTAG TAAATATTTT TCCAGGTCTT GTCTAGAATG ATTTTTTTGT 148602 .......... .......... .......... .......... .......... .......... 229 TTAGTAAACA TCATGTGGGT GAATTGACAA ACTGCTTGTT TTTTTTAAAT TTCTGTAGTA 148662 .......... .......... .......... .......... .......... .......... 229 CAAATCAGGT ATTAGATACT GTTGTTCCAG TCTTGCTTGT TGATGGATAT AATGTGTGTG 148722 .......... .......... .......... .......... .......... .......... 229 GATATTGGCC AAAGTTGAAG AAGCATTTTA TGAATGGAAG CCTTGACATT GCTCGTCAAA 148782 .......... .......... .......... .......... .......... .......... 229 AACTCATTGA TGAACTTGTA TCATTCAGTT TGCTAAGAGG TTTGGGTCTT TTTATCCTTC 148842 .......... .......... .......... .......... .......... .......... 229 GATGAGCCTG TTCCTATGTT GCATTAAAGC TTGTTAGAGC ACATGTGGTC TTGTCTAGCT 148902 .......... .......... .......... .......... .......... .......... 229 CTAGACTCAA ATGAATAAAG TTGTCTTCGT GTGACTTATA TGTCATGGAT TTGATCCGTG 148962 .......... .......... .......... .......... .......... .......... 229 GAATCAGCCA CTAATACTTG TATTAGGGAG GCTGCCTACA TCTTACTTCC TTGGTGTGAG 149022 .......... .......... .......... .......... .......... .......... 229 GCCCTTCCAC TATTCTGCAT GAATGCGGTA TGCTATATGC ACTGGGCTGC TTTTTTTATA 149082 .......... .......... .......... .......... .......... .......... 229 TGTGCATCTC AATAATCACT TGAAAGGCTC ATAACTATCC TTGCAGTGAA TTCCTTCTGA 149142 .......... .......... .......... .......... .......... .......... 229 TACTTTTATT TTCTGAAGTA GTTTATCTGA TACAGATTCT GCTATTCTTT TTTTCTTTTA 149202 .......... .......... .......... .......... .......... .......... 229 GATGACTTTT TTTCTAGCTA TTGTAATATG ATTCTGCTAG CTGTAGCAGT TTTCTTCTGT 149262 .......... .......... .......... .......... .......... .......... 229 TTTTAATCAG ATTATTAGCA TCTCGCACAT TGAAATGAGC TGGTAGAAAT CCTATATTGT 149322 .......... .......... .......... .......... .......... .......... 229 CAAAAATAGT TGCTCTTTAT ATACTTTATT CATGTCTAAT AACTTGTCAA TTGGTGAATG 149382 .......... .......... .......... .......... .......... .......... 229 TTGCCATCTC ATTTCAGTAT ATTGCAGAGG TGAAAGTGGT GGTGGTGTTT GATGCTATGA 149442 .......... .......... .......... .......... .......... .......... 229 TGTCTGGAAT GGCTACACAC AAGGAAGACT TTGAGGGGTA ATTACATTAG ACAATGAAAA 149502 .......... .......... .......... .......... .......... .......... 229 ACAACCCCAT AGTTACCTTC TGTGGATATT TTTCTGTCTT ACAGACAGGC TCTTGGAATT 149562 .......... .......... .......... .......... .......... .......... 229 TGCTATTATT TTTCTGCTCG TCTGTCATTA CTGTAGTTTC ACATGAAATC AGATTCTTGT 149622 .......... .......... .......... .......... .......... .......... 229 CCTCCTTTCA ATAGGTAATA TGTAAATGTG CTGTTGCATA CTAATGCTAT ATGGAATGGA 149682 .......... .......... .......... .......... .......... .......... 229 ATTATGAGTA TTGAGCATAC TTTCAAGGAT TTTTTAGTTG TATTTATTTT CAGCCTCTAT 149742 .......... .......... .......... .......... .......... .......... 229 ATTTTCCCAC TTTTGAGATG TTCTGGTGAC TAAAGAAGAA ATCTGATTTC ATTATCATAT 149802 .......... .......... .......... .......... .......... .......... 229 TTATCATGTT CATTGATATC TGATGCAGAA ACCAAA 149838 | | | || .......... .......... ........TA AGCTAA 237 hqPGS_C10HBa0115K16.1+_SGN-E232987- (146924 147079) ******************************************************************************** EST sequence 229 -strand 644 n (File: SGN-E376857-) 1 AAAAAGTCAA ATGTACAAAA GTCGTAAAGT AAATAGTTTG TCGGCCAATC ATGTAAAAAA 61 GTTTGTCGGC CAATTATGTA AAGTAAATAG TATGACGGTG TAATTTATGT GTATAAATAG 121 AGGAGCTTTC CTCATAAATA AAACACACCT TCATCCTTAC ATCTCTCATC TTTCTGAATA 181 CTCTCTCTTT ACGCTTGCAC CCCAAAATTG GTATCAGAGC TAGATAGTTA ACAAAATAAG 241 CTAATAACTA TGGAGAAATC CGAAGCTACA AATCTACAAA ATCAGGTATA TACTATTAAA 301 TTTATGAGTA GCTAAATTTT ATTTATTCCT GAAAATCTCT TGTTGATTAT AATTGTTTAT 361 CATGACTTAA TAATACTTTA ATAAGCATCT TTAGAAGGTT TACTACAGAA ATATTCTCTG 421 AATGAGTATG CCCAGACTAT GTCATCCTAA GGTTGAAACC GGTAGGCAAG AGGGCCGTTT 481 AGGGGAGTAA ACAAAGTTGA GGCGCTGTTA GGGTAACTAA TAAAAGAAGA AAGCTGTAGT 541 GGTGACTAGA CGAGATGATT ATTAAATCAT TATTATTTCA TAATAAATAA GTATAATCCA 601 TTAAGAGCTT GGAAGGAATA AAACTTTTAG CAAAAATGAA TAAG Predicted gene structure (within gDNA segment 146222 to 151983): Exon 1 146925 147079 ( 155 n); cDNA 56 210 ( 155 n); score: 0.981 Intron 1 147080 147615 ( 536 n); Pd: 0.443 (s: 0.96), Pa: 0.000 (s: 0) Exon 2 147616 147641 ( 26 n); cDNA 211 236 ( 26 n); score: 0.635 Intron 2 147642 149830 (2189 n); Pd: 0.057 (s: 0), Pa: 0.822 (s: 0) Exon 3 149831 149838 ( 8 n); cDNA 237 244 ( 8 n); score: 0.625 MATCH C10HBa0115K16.1+ SGN-E376857- 0.981 189 0.293 C PGS_C10HBa0115K16.1+_SGN-E376857- (146925 147079,147616 147641,149831 149838) Alignment (genomic DNA sequence = upper lines): AAATAGTTTG TCGGCCAATT ATGTAAAGTA AATAGTATGA CGGTGTAATT TATGTGTATA 146984 ||| |||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAAAAGTTTG TCGGCCAATT ATGTAAAGTA AATAGTATGA CGGTGTAATT TATGTGTATA 115 AATAGAGGAG CTTTCCTCAT AAATAAAACA CACCTTCATC CTTACATCTC TCTTCTTTCT 147044 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| || ||||||| AATAGAGGAG CTTTCCTCAT AAATAAAACA CACCTTCATC CTTACATCTC TCATCTTTCT 175 GAATACTCTC TCTTTACGCT TCCACCCCAA AATTGGTATT CATTCAATTA AGGAAAGGAA 147104 |||||||||| |||||||||| | |||||||| ||||| GAATACTCTC TCTTTACGCT TGCACCCCAA AATTG..... .......... .......... 210 AATAAATTCT ACAAGTGATT TTGGGTTGTC CAGTCAGTTC TCCCTTTTTT TGAGGAATGT 147164 .......... .......... .......... .......... .......... .......... 210 AAAAGATTGC TTGCAGTATG ATGTAAATAA ACACATTAAT GATAACTAGA GGGAAGATTG 147224 .......... .......... .......... .......... .......... .......... 210 TATAACTGGA CTTAAGAATT ATCTAGGAAA AATAGATAAA ACATGAGTAA TAGGATATGA 147284 .......... .......... .......... .......... .......... .......... 210 AACATAGTTT TGCTTTGATC ATGGCCCAGC ATTCTCACTA TAGAAGGACC CTAAATGTTC 147344 .......... .......... .......... .......... .......... .......... 210 ATTGTGATAT TCAGCAGTTT GAAAATAAGC ACTTCCTCAG TTATTTTATG TGTATTTGTT 147404 .......... .......... .......... .......... .......... .......... 210 TGATGGGAAA TAAGAAAATT TTGAATATTG AGGTCTTTAA ACTAAAGACA TGTATAATGT 147464 .......... .......... .......... .......... .......... .......... 210 ATGCCTTTTG AATCCTGGGG TCTTAAGCAT GCTATGTAGT ATATTGAATT AAAGAGTTAC 147524 .......... .......... .......... .......... .......... .......... 210 TAAATATAAA AAGTGTACCT TTTTATAAAC AAACTAAAAA TGGAAGTAAC ACACATAAAC 147584 .......... .......... .......... .......... .......... .......... 210 GAAATAGAGG GAATAGTACT TTTTGTTGAT GATATCATGA GATAGA-ACC TTACAGAAGT 147643 ||||| || | |||| | | ||| || .......... .......... .......... .GTATCA-GA GCTAGATAGT TAACAAAA.. 236 TGGCATCATT TTTCTACCAA AAGACAAAGA TTACATTTTG ATTTATGAAT TACTCTAATT 147703 .......... .......... .......... .......... .......... .......... 236 GGTTTGCTTG TTAGCAATCA CATATCTTTA TGTTATCCAT AGGGCGAGTT ATCAGAAAGG 147763 .......... .......... .......... .......... .......... .......... 236 ATAGAAGTTA TGAAGAAACA CTAGCTCGCT TTGTCAGACA TATAGGTAGT CCATTTGCTT 147823 .......... .......... .......... .......... .......... .......... 236 TGATGTGATT GGAAATGCTC TTCTGCCTAT CGATTGTTTT TAAATGAAAT AATTTTGCTG 147883 .......... .......... .......... .......... .......... .......... 236 CTGTATCTCT ACGTTGCTCA CAACTGGATA TATATCATTT GTATGGCCAC TAGACATGCA 147943 .......... .......... .......... .......... .......... .......... 236 AGTGCTAGAA GTTGATTTTA GGAGTAATTT TCATTAAGGG CTGGAGCTAG TCAAACTAAA 148003 .......... .......... .......... .......... .......... .......... 236 AAGTTGTTTG GGAATCATTC AAAAGTAAAA CTGAGAAATT CTTAAATTGG ACACAACAGT 148063 .......... .......... .......... .......... .......... .......... 236 TTTTGGGATG TCATGGGATA CCAAACCATG TATTAATCCA TCGACTGGAA ATGTGTCTTA 148123 .......... .......... .......... .......... .......... .......... 236 GTATGCCAAT CTTTCCTATT TTTTAAAACT ATATTTGCTT ACTTTGTTGA AATGTTTTGA 148183 .......... .......... .......... .......... .......... .......... 236 TAATTCCACC TAGAACTGAC AAGATAATCA TGTAATTTGA ATGTCCTGCT GAATAATTTA 148243 .......... .......... .......... .......... .......... .......... 236 AATCTAATAA ACTTTACTTA TTCGACTTCA AATAGGATAC TGATATGCCC CCTCCAAGGA 148303 .......... .......... .......... .......... .......... .......... 236 TTACATCAAA ATTGAAGCAG AATTTGCAGT TCCTAAAATT ATGGAAGGTC AGTCTTATAT 148363 .......... .......... .......... .......... .......... .......... 236 TAATATCAAT GGACCCTGTT ACGAGATCTA GTATATTATT TTCTGCAATT CATATGGTGG 148423 .......... .......... .......... .......... .......... .......... 236 AAATTTATTT TAGGAGTTCC AAAAGAGAAA ATCCAGTACT CCAAAGCCTG CTACTAGTTA 148483 .......... .......... .......... .......... .......... .......... 236 TCGTAAGAAG AAGGTGGAGA AGGAAGAACT GCCTGACGAT GAAGAGATCT ACCGCGATCC 148543 .......... .......... .......... .......... .......... .......... 236 TACATTGGCA CTATACTAGT AAATATTTTT CCAGGTCTTG TCTAGAATGA TTTTTTTGTT 148603 .......... .......... .......... .......... .......... .......... 236 TAGTAAACAT CATGTGGGTG AATTGACAAA CTGCTTGTTT TTTTTAAATT TCTGTAGTAC 148663 .......... .......... .......... .......... .......... .......... 236 AAATCAGGTA TTAGATACTG TTGTTCCAGT CTTGCTTGTT GATGGATATA ATGTGTGTGG 148723 .......... .......... .......... .......... .......... .......... 236 ATATTGGCCA AAGTTGAAGA AGCATTTTAT GAATGGAAGC CTTGACATTG CTCGTCAAAA 148783 .......... .......... .......... .......... .......... .......... 236 ACTCATTGAT GAACTTGTAT CATTCAGTTT GCTAAGAGGT TTGGGTCTTT TTATCCTTCG 148843 .......... .......... .......... .......... .......... .......... 236 ATGAGCCTGT TCCTATGTTG CATTAAAGCT TGTTAGAGCA CATGTGGTCT TGTCTAGCTC 148903 .......... .......... .......... .......... .......... .......... 236 TAGACTCAAA TGAATAAAGT TGTCTTCGTG TGACTTATAT GTCATGGATT TGATCCGTGG 148963 .......... .......... .......... .......... .......... .......... 236 AATCAGCCAC TAATACTTGT ATTAGGGAGG CTGCCTACAT CTTACTTCCT TGGTGTGAGG 149023 .......... .......... .......... .......... .......... .......... 236 CCCTTCCACT ATTCTGCATG AATGCGGTAT GCTATATGCA CTGGGCTGCT TTTTTTATAT 149083 .......... .......... .......... .......... .......... .......... 236 GTGCATCTCA ATAATCACTT GAAAGGCTCA TAACTATCCT TGCAGTGAAT TCCTTCTGAT 149143 .......... .......... .......... .......... .......... .......... 236 ACTTTTATTT TCTGAAGTAG TTTATCTGAT ACAGATTCTG CTATTCTTTT TTTCTTTTAG 149203 .......... .......... .......... .......... .......... .......... 236 ATGACTTTTT TTCTAGCTAT TGTAATATGA TTCTGCTAGC TGTAGCAGTT TTCTTCTGTT 149263 .......... .......... .......... .......... .......... .......... 236 TTTAATCAGA TTATTAGCAT CTCGCACATT GAAATGAGCT GGTAGAAATC CTATATTGTC 149323 .......... .......... .......... .......... .......... .......... 236 AAAAATAGTT GCTCTTTATA TACTTTATTC ATGTCTAATA ACTTGTCAAT TGGTGAATGT 149383 .......... .......... .......... .......... .......... .......... 236 TGCCATCTCA TTTCAGTATA TTGCAGAGGT GAAAGTGGTG GTGGTGTTTG ATGCTATGAT 149443 .......... .......... .......... .......... .......... .......... 236 GTCTGGAATG GCTACACACA AGGAAGACTT TGAGGGGTAA TTACATTAGA CAATGAAAAA 149503 .......... .......... .......... .......... .......... .......... 236 CAACCCCATA GTTACCTTCT GTGGATATTT TTCTGTCTTA CAGACAGGCT CTTGGAATTT 149563 .......... .......... .......... .......... .......... .......... 236 GCTATTATTT TTCTGCTCGT CTGTCATTAC TGTAGTTTCA CATGAAATCA GATTCTTGTC 149623 .......... .......... .......... .......... .......... .......... 236 CTCCTTTCAA TAGGTAATAT GTAAATGTGC TGTTGCATAC TAATGCTATA TGGAATGGAA 149683 .......... .......... .......... .......... .......... .......... 236 TTATGAGTAT TGAGCATACT TTCAAGGATT TTTTAGTTGT ATTTATTTTC AGCCTCTATA 149743 .......... .......... .......... .......... .......... .......... 236 TTTTCCCACT TTTGAGATGT TCTGGTGACT AAAGAAGAAA TCTGATTTCA TTATCATATT 149803 .......... .......... .......... .......... .......... .......... 236 TATCATGTTC ATTGATATCT GATGCAGAAA CCAAA 149838 || | || .......... .......... .......TAA GCTAA 244 hqPGS_C10HBa0115K16.1+_SGN-E376857- (146925 147079) ******************************************************************************** EST sequence 21 +strand 546 n (File: SGN-E292396+) 1 TATATTCAAG TGAAACATGT GCTGATGCAT GGATTGAGAA GGAGGTGGTC GCTTTAAGGC 61 AGGATGGGTG TCCAAAAGTA TGGGTTGTCA CATCTGATCA TAATCAGCAG CATGCAGCCT 121 ATGGAGCAGG GGCTTTTGTT TGGAGCTGCA AGGCATTAAT CTCTGAGATC AAAGCTTCAC 181 ACAAGGAGGT TGAGAGAATG CTGCGGGAAC ATAGATCTAC TTCTATGCAA GGTAAATTGT 241 TAAAGCACAA CCTCGCTGCA GAAGTTGTGG ATGCTCTTAA GGACCTCAGG GACCAGCTTT 301 CTCAAAATGA GATGCGCAGA TGACAAGTCT CACAAAAGGC TATGTCAGAG ACAAAACAGA 361 ATTTTAAGTC AATGGATGTT AAGTTCTAAC TGCACTAGTA ACTTTGTGAC AGTATATTTG 421 GATGAGTGTT ATCGATACAT GTATACTAAA TGTTTCAACC ACACGTGTAC ATCTTGTGCT 481 GATGATACGT TAAACATGCA AAGATCATGT TCCTGCCTCA AAAAAGCAAA ATAACACCTT 541 TAAGGA Predicted gene structure (within gDNA segment 149408 to 154493): Exon 1 150008 150051 ( 44 n); cDNA 1 44 ( 44 n); score: 1.000 Intron 1 150052 150686 ( 635 n); Pd: 0.917 (s: 1.00), Pa: 0.291 (s: 1.00) Exon 2 150687 150770 ( 84 n); cDNA 45 128 ( 84 n); score: 1.000 Intron 2 150771 151333 ( 563 n); Pd: 0.957 (s: 1.00), Pa: 0.915 (s: 0) Exon 3 151334 151372 ( 39 n); cDNA 129 167 ( 39 n); score: 1.000 Intron 3 151373 152284 ( 912 n); Pd: 0.967 (s: 0), Pa: 0.791 (s: 1.00) Exon 4 152285 152331 ( 47 n); cDNA 168 214 ( 47 n); score: 1.000 Intron 4 152332 153335 (1004 n); Pd: 0.972 (s: 1.00), Pa: 0.842 (s: 1.00) Exon 5 153336 153642 ( 307 n); cDNA 215 521 ( 307 n); score: 1.000 MATCH C10HBa0115K16.1+ SGN-E292396+ 1.000 521 0.954 C PGS_C10HBa0115K16.1+_SGN-E292396+ (150008 150051,150687 150770,151334 151372,152285 152331,153336 153642) Alignment (genomic DNA sequence = upper lines): TATATTCAAG TGAAACATGT GCTGATGCAT GGATTGAGAA GGAGGTGAGA ATGTGATGAA 150067 |||||||||| |||||||||| |||||||||| |||||||||| |||| TATATTCAAG TGAAACATGT GCTGATGCAT GGATTGAGAA GGAG...... .......... 44 GCTCAATTCT AGAGAAGATT TATGTACTTA GTACTAGAAG TATGTTATCT TGATAGCCTT 150127 .......... .......... .......... .......... .......... .......... 44 TTTGGATGGT AGTTTTTTTT CTGCTAGAAC AATTGCAAAA TTAATGCCCA TTTGCATTAG 150187 .......... .......... .......... .......... .......... .......... 44 AAGTTAAAAC TGAAAATTTG AATCATTGCT TTCATTTAAC AAGGGTTGAT GTTCATCCGT 150247 .......... .......... .......... .......... .......... .......... 44 TCTTACCTTT TTATCCATGT CAGATAATAC AGTGCAGATT TTACTGTATA GATTGTGCAT 150307 .......... .......... .......... .......... .......... .......... 44 TTATTGGATC AAGATGGGTT CACATCTGTG CTCATCCTGT AAATTCATTT ACAACAAATT 150367 .......... .......... .......... .......... .......... .......... 44 ATGTCTTCCT TATTCGTTAA CTAAATTATT GCATGACATT CACGTGAAAT CATTTTATAT 150427 .......... .......... .......... .......... .......... .......... 44 GTCCCAAGAA TTTCCTAGTC TATTGCTGAC ATTAGAGTTT GGACCAGGAG TGGTTGAAGG 150487 .......... .......... .......... .......... .......... .......... 44 GTAATTGTAC TTGGTATGGT TTAAGTTGAA AGTTTTCTCT CCAGTTTTCT GTGATTTGTT 150547 .......... .......... .......... .......... .......... .......... 44 GCACCACCAT TAGATGCAAT ACTGAGCCTT ACACTGAATT ATTCTAACTA GTTTGCTTGA 150607 .......... .......... .......... .......... .......... .......... 44 TGCACATACC TTTATGTGTT TTATTTAGCT GATCTTTCTA TGGCTGGACT GATAGATTTG 150667 .......... .......... .......... .......... .......... .......... 44 TTGTCCATGA CTTTGAAAGG TGGTCGCTTT AAGGCAGGAT GGGTGTCCAA AAGTATGGGT 150727 | |||||||||| |||||||||| |||||||||| |||||||||| .......... .........G TGGTCGCTTT AAGGCAGGAT GGGTGTCCAA AAGTATGGGT 85 TGTCACATCT GATCATAATC AGCAGCATGC AGCCTATGGA GCAGTATGTA CTCTACCTTG 150787 |||||||||| |||||||||| |||||||||| |||||||||| ||| TGTCACATCT GATCATAATC AGCAGCATGC AGCCTATGGA GCA....... .......... 128 ATACGTGATA GGATTCTAAA TAGGAAACTC TTAAAGAAAA TGATAATGGA AAGAAATAAG 150847 .......... .......... .......... .......... .......... .......... 128 CAAAATATAG AAGAAAGACA ATATTGATAA TGGATTTATG GGCAACGTTG GATTTGTTAC 150907 .......... .......... .......... .......... .......... .......... 128 CAACACTTCC GATCAAATTC AATCGAGTCC AAATGGTTAT ATTGACTTGT TCAAAGTCTT 150967 .......... .......... .......... .......... .......... .......... 128 TAATTCTAAG GGGGGAGGGG GGGCATAAAA CCTTAAAATG AAGGGTTGAG TTGTTGCACT 151027 .......... .......... .......... .......... .......... .......... 128 TAATTCAAGT GAATTTTTTA TGCTTGTGAT TTCCTGATCC ATGTACTAAT TGAAGTGCGC 151087 .......... .......... .......... .......... .......... .......... 128 CAACAACTTT TCCCTGTAGT CTGAATCTGA TTATATATTT CTGATAGCAC TCACACATTT 151147 .......... .......... .......... .......... .......... .......... 128 CAATTTTTTC TGGTACTCTA ACCTTCTATG AAGGTAAAAT GATTAGCTAT CTGTTTAAAG 151207 .......... .......... .......... .......... .......... .......... 128 GAAAAGTACA ATAAGTAGCT GTTTCATCTA CAGTCGACAA CCTCTTTTCA TCGCCATCCA 151267 .......... .......... .......... .......... .......... .......... 128 TTCTCTAGCA TACATCCTTT GGGTAGAGAC TAATTTTCCT TGTTAAAACT TTGGCGGTTC 151327 .......... .......... .......... .......... .......... .......... 128 TACCAGGGGG CTTTTGTTTG GAGCTGCAAG GCATTAATCT CTGAGGTAAT GTGCAAATAT 151387 |||| |||||||||| |||||||||| |||||||||| ||||| ......GGGG CTTTTGTTTG GAGCTGCAAG GCATTAATCT CTGAG..... .......... 167 CAGCTTCTTC ATGGTGCTTG GCATTAGCCT TTGTCATCTC TCAATTTTCT TTGCTACTTC 151447 .......... .......... .......... .......... .......... .......... 167 ATGCCTTAAA ACAGACAAAG GAAAGCCAGG TTGAGAGTTA AAAAAAAATC TTTCTTCTGC 151507 .......... .......... .......... .......... .......... .......... 167 ATAATGAAGA ATAAAGAAAA ATAAAAGTAT ATTTATTGTA TTGAGTGAGA TGAGAAGTTT 151567 .......... .......... .......... .......... .......... .......... 167 TTATACCGTA CTTGTTACCT GAACTGAAGA AAATATAGTT TTCTTAAACT TTTCTTCATT 151627 .......... .......... .......... .......... .......... .......... 167 TATTCTCTGT CCTCTTATTC TTGTTTTCCT TCTCCATTTT CTTTCTAATG GAAAAATATG 151687 .......... .......... .......... .......... .......... .......... 167 GGAGTTGCTC CTCAACTTAA TAGGTGCAAC TTAACAATCT AAGAGAAGGG GTATGTTGAG 151747 .......... .......... .......... .......... .......... .......... 167 TCCAAAAAGA AAGTTCAAGG GCTTAGATGA GAGTAACTAA AGTATAAGAG CTTAAGCAAT 151807 .......... .......... .......... .......... .......... .......... 167 ATTCTTCTGT AAAGTCTAAA GCTATATGGT CTTTTCCCCT TTACGTATTG CGTAGAACTA 151867 .......... .......... .......... .......... .......... .......... 167 CTGGTAAAAT CTATGTTGCT CGGACTCTTA AAAAATGTCA ATGGGTGCGT GTCGGATTCG 151927 .......... .......... .......... .......... .......... .......... 167 CCAAAAGTAG TGTATTTGTG AAGAATCCGA GACGGGTGTG GCATCAAAAG TGAAGAGTCC 151987 .......... .......... .......... .......... .......... .......... 167 GCGCAACTAA GGGTAAAATT GTTTTCGTAA AATACTTGTA CTCAGTAGAA TAGTCTTATT 152047 .......... .......... .......... .......... .......... .......... 167 TTGACTCTAA CTGACATTCG GATTGGAGGC TTAATAATAT GATCCGTGCT GTTGACATTG 152107 .......... .......... .......... .......... .......... .......... 167 GCACCTATCT GACTTTGTTT TAGTTAAAAA TGTCTAACAC CTGTATGCTC GTAGATATGA 152167 .......... .......... .......... .......... .......... .......... 167 AGATTAGGTG CTTGAATGTT CATCTAAAGT GTTTGCACTA AATAGTAATA GCTACTGCTA 152227 .......... .......... .......... .......... .......... .......... 167 TGAATAATAT GCTCCCTAAT TCTGATGTAA ATTCTCTGAT CCTTTGAGAT AATGTAGATC 152287 ||| .......... .......... .......... .......... .......... .......ATC 170 AAAGCTTCAC ACAAGGAGGT TGAGAGAATG CTGCGGGAAC ATAGGTATAC CACGTAGTTT 152347 |||||||||| |||||||||| |||||||||| |||||||||| |||| AAAGCTTCAC ACAAGGAGGT TGAGAGAATG CTGCGGGAAC ATAG...... .......... 214 GAATTTTTTT CGTTTCTTGT CTAATCTGAA GATTACTCTG CTCCTCGGGT TGGAAAAATA 152407 .......... .......... .......... .......... .......... .......... 214 TTCATCTGAA TGTAGGCTTT AAGCAACTCA CCTTTCCCAT ATTCTTCTTG ACCTTTCAAG 152467 .......... .......... .......... .......... .......... .......... 214 AAAAATTATT TTAACACAAT TGAATGCTAG TTTGCAGTGT ATGTTCTTTT ATTTACCTTA 152527 .......... .......... .......... .......... .......... .......... 214 CAGCTGTTTC TCGTAAAGCT TATAAAGTAG TAGACTTTCT GAAAGAGAGT TTTAATAATT 152587 .......... .......... .......... .......... .......... .......... 214 AGTTTTAAAC TTGTTTAAAG TTGAATTGAA GGCATGTCTT GTGATTAGCT TTACTCTAAT 152647 .......... .......... .......... .......... .......... .......... 214 ATATTCTAGT TGAGGTTTGA TGGGACATTT CAGTATCCTT CATCTTTCTT ACAGCATGTA 152707 .......... .......... .......... .......... .......... .......... 214 GGTAAAGAGT CATTTAGTAA TTGACCTGCT CGAGCCCCTT GTCCTCAGCC AAGTGGCTGA 152767 .......... .......... .......... .......... .......... .......... 214 GAATGTAAAA TCCAGCATGT TGATGAAGTT CTTTTTTTTT TTTTACTTTT TGATGAAGTA 152827 .......... .......... .......... .......... .......... .......... 214 AAGTGTACTT GTATATTTTC TTCTGATATG AAAAAAGAAA ACGCTATGTT ATGCTTGACA 152887 .......... .......... .......... .......... .......... .......... 214 AACAAGTATA ACCCAGCACC AATAACAGTA CGTACCTCAT AAACTGCTTG TTAGCTAAAC 152947 .......... .......... .......... .......... .......... .......... 214 TAACGGCATT TATCTGATGA ATTATTTTCT CTGTTTTTAG TTTTACTGAA GATACACAAG 153007 .......... .......... .......... .......... .......... .......... 214 TAGAAATTGT TGAAGAAGAA GTTTGAAAAT ATATATCTGT ATGATTGTGT GTGCTGTTGC 153067 .......... .......... .......... .......... .......... .......... 214 TTTGTTTTTG TTGTTATTGC TCTTTCCCCC CTCCCCCCTG AAATAGTTAT CATTGCATTG 153127 .......... .......... .......... .......... .......... .......... 214 TGGATATTTC AATCTCATCA ACTATATATA GCTCATCCAT TCATTATACT TCTTTCCTCT 153187 .......... .......... .......... .......... .......... .......... 214 CCAGCTGTTG AATCAATTGG CAAAACTAGT AATGATAGGC TATAGTATGA TTAATGGATC 153247 .......... .......... .......... .......... .......... .......... 214 CTATTCATGC TATCTTTTGC ACTTACATAA TTTCATCGAC ATCTGATGCG ATGCTAATAA 153307 .......... .......... .......... .......... .......... .......... 214 TTTCTTGGTG TATCGATATT CTTCACAGAT CTACTTCTAT GCAAGGTAAA TTGTTAAAGC 153367 || |||||||||| |||||||||| |||||||||| .......... .......... ........AT CTACTTCTAT GCAAGGTAAA TTGTTAAAGC 246 ACAACCTCGC TGCAGAAGTT GTGGATGCTC TTAAGGACCT CAGGGACCAG CTTTCTCAAA 153427 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACAACCTCGC TGCAGAAGTT GTGGATGCTC TTAAGGACCT CAGGGACCAG CTTTCTCAAA 306 ATGAGATGCG CAGATGACAA GTCTCACAAA AGGCTATGTC AGAGACAAAA CAGAATTTTA 153487 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATGAGATGCG CAGATGACAA GTCTCACAAA AGGCTATGTC AGAGACAAAA CAGAATTTTA 366 AGTCAATGGA TGTTAAGTTC TAACTGCACT AGTAACTTTG TGACAGTATA TTTGGATGAG 153547 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGTCAATGGA TGTTAAGTTC TAACTGCACT AGTAACTTTG TGACAGTATA TTTGGATGAG 426 TGTTATCGAT ACATGTATAC TAAATGTTTC AACCACACGT GTACATCTTG TGCTGATGAT 153607 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTTATCGAT ACATGTATAC TAAATGTTTC AACCACACGT GTACATCTTG TGCTGATGAT 486 ACGTTAAACA TGCAAAGATC ATGTTCCTGC CTCAA 153642 |||||||||| |||||||||| |||||||||| ||||| ACGTTAAACA TGCAAAGATC ATGTTCCTGC CTCAA 521 hqPGS_C10HBa0115K16.1+_SGN-E292396+ (150008 150051,150687 150770,151334 151372,152285 152331,153336 153642) ******************************************************************************** EST sequence 267 -strand 666 n (File: SGN-E347002-) 1 TTTTGTTTTA ACATAAGCTN CCATGCACTT GCAACNGATG AGAGAAAGTT CAAATGATTT 61 TCCATCACCA GCATNTATAT GACATTCTTT AAACACCTTT GTGTAAAACC TAGGCTCCGA 121 TAAATGGGTT GGATTGTTCT TTCGCTTGTG GTCTCCTGAT TGATGGAAGC ATGACTCTCT 181 GAAAAATATG TAGCCTCCAA CTTTCAACCA TTTTACCATT CTCTCCACAA GACTCTGGAC 241 CTCTTCATCA GAAAGATACA TCAGTAACCA GTTTGAAAAT ATCAAATCGA CTGATTCAGG 301 TGAAAACTTC AAATCTGGAG AAGTCACATC AGCACACATA AACTTGACAT TCTTATGATG 361 CTTATTGATG CTTTCATTCT TCTTAATTGC GCTTTCGATA AAGTCCAGTG CTATGAGCTG 421 CCCAGCATTC TTGGCTAACT CACTAGTGAA ACGGCCAATA CCAGCACCCA ACTCTAACAC 481 TGATTTCCCT TCATATGGTG GGAGTAGAGA GAGCACGTAT GTTGCTTGGA CTCTTCAAAA 541 ATGCCTGCGA GTGCGTGTCG GATTCGCCAA AAGTAGTGTA TTTCTGGAGA ATTCGAGATG 601 GGTGTGGCAT CAAAAGTGAA GAGTTGGGGC AAATAAGAAG ACTACAGGGT AGGTGGTAGC 661 AAGTAG Predicted gene structure (within gDNA segment 145802 to 153005): Exon 1 151468 151476 ( 9 n); cDNA 509 517 ( 9 n); score: 0.667 Intron 1 151477 151878 ( 402 n); Pd: 0.813 (s: 0), Pa: 0.000 (s: 0.86) Exon 2 151879 151998 ( 120 n); cDNA 518 637 ( 120 n); score: 0.875 MATCH C10HBa0115K16.1+ SGN-E347002- 0.875 129 0.194 C PGS_C10HBa0115K16.1+_SGN-E347002- (151468 151476,151879 151998) Alignment (genomic DNA sequence = upper lines): GAAAGCCAGG TTGAGAGTTA AAAAAAAATC TTTCTTCTGC ATAATGAAGA ATAAAGAAAA 151527 || ||| | GAGAGCACG. .......... .......... .......... .......... .......... 517 ATAAAAGTAT ATTTATTGTA TTGAGTGAGA TGAGAAGTTT TTATACCGTA CTTGTTACCT 151587 .......... .......... .......... .......... .......... .......... 517 GAACTGAAGA AAATATAGTT TTCTTAAACT TTTCTTCATT TATTCTCTGT CCTCTTATTC 151647 .......... .......... .......... .......... .......... .......... 517 TTGTTTTCCT TCTCCATTTT CTTTCTAATG GAAAAATATG GGAGTTGCTC CTCAACTTAA 151707 .......... .......... .......... .......... .......... .......... 517 TAGGTGCAAC TTAACAATCT AAGAGAAGGG GTATGTTGAG TCCAAAAAGA AAGTTCAAGG 151767 .......... .......... .......... .......... .......... .......... 517 GCTTAGATGA GAGTAACTAA AGTATAAGAG CTTAAGCAAT ATTCTTCTGT AAAGTCTAAA 151827 .......... .......... .......... .......... .......... .......... 517 GCTATATGGT CTTTTCCCCT TTACGTATTG CGTAGAACTA CTGGTAAAAT CTATGTTGCT 151887 ||||||||| .......... .......... .......... .......... .......... .TATGTTGCT 526 CGGACTCTTA AAAAATGTCA ATGGGTGCGT GTCGGATTCG CCAAAAGTAG TGTATTTGTG 151947 |||||||| ||||||| | | |||||| |||||||||| |||||||||| ||||||| || TGGACTCTTC AAAAATGCCT GCGAGTGCGT GTCGGATTCG CCAAAAGTAG TGTATTTCTG 586 AAGAATCCGA GACGGGTGTG GCATCAAAAG TGAAGAGTCC GCGCAACTAA G 151998 ||||| ||| || ||||||| |||||||||| |||||||| | |||| ||| | GAGAATTCGA GATGGGTGTG GCATCAAAAG TGAAGAGTTG GGGCAAATAA G 637 hqPGS_C10HBa0115K16.1+_SGN-E347002- (151879 151998) ******************************************************************************** EST sequence 176 -strand 656 n (File: SGN-E250381-) 1 ATTTCAATGG GTGCATGTCG GATTCGCCAA AAGTAGTGTA TTTTTTAAGA ATCTGAGACG 61 GGTGTGGCAT CAAAAGTGAA GAGTCCGCAC AACTAAGGTT CTGGTAAGTT CACTAATTGA 121 GAAATCACAA GAAGTGTGAC AAAAATAGAT CTTTCTATCA AATAATATAA GAAGTGTTAC 181 ATGTATGACA ACCATCCACC AAGCTCTGCC AAAAACAATA TCTAGTGCCT TAGGAAGTAG 241 TTAGTGTTTT TCCCATCTGA TCCATAGAGG GATACCAGAC ACTTCAGGTC CAAAGGATTT 301 NTTTTTCTCA ATTTCATATG CATTTAAGGG CATGCACAAT TAGTTTCCCA AGACTGGAAG 361 TGACTGGAAG TTAATGCCAT TGCATATATA TATAATGAGT ACACCAAAGC ATCTAGATCC 421 GTGAATCATG CAAAGGTTGC TATCCTGAAT AACCACCACT GTTCTGAAAA AATAACACAA 481 CCCTATATGC AAGTTGACTT GCACGAAGAC CTTCCGAAAT TTAGTAGTCA GGAAGGACTC 541 AAGTAGATCA AACGATGCAC TGCACTTGGA GATAGGGAAG ATGAAGATTG ATCAAGGATT 601 GTTCCAGAGT TTAAGATAGA CTATAGCATG CACGTGTGAA GATGGGCATG TTAAGA Predicted gene structure (within gDNA segment 151157 to 158269): Exon 1 151902 151999 ( 98 n); cDNA 1 98 ( 98 n); score: 0.939 Intron 1 152000 157152 (5153 n); Pd: 0.991 (s: 0.96), Pa: 0.999 (s: 0) Exon 2 157153 157159 ( 7 n); cDNA 99 105 ( 7 n); score: 0.714 Intron 2 157160 157442 ( 283 n); Pd: 0.000 (s: 0), Pa: 0.941 (s: 0) Exon 3 157443 157455 ( 13 n); cDNA 106 117 ( 12 n); score: 0.769 MATCH C10HBa0115K16.1+ SGN-E250381- 0.939 118 0.180 C PGS_C10HBa0115K16.1+_SGN-E250381- (151902 151999,157153 157159,157443 157455) Alignment (genomic DNA sequence = upper lines): ATGTCAATGG GTGCGTGTCG GATTCGCCAA AAGTAGTGTA TTTGTGAAGA ATCCGAGACG 151961 || ||||||| |||| ||||| |||||||||| |||||||||| ||| | |||| ||| |||||| ATTTCAATGG GTGCATGTCG GATTCGCCAA AAGTAGTGTA TTTTTTAAGA ATCTGAGACG 60 GGTGTGGCAT CAAAAGTGAA GAGTCCGCGC AACTAAGGGT AAAATTGTTT TCGTAAAATA 152021 |||||||||| |||||||||| |||||||| | |||||||| GGTGTGGCAT CAAAAGTGAA GAGTCCGCAC AACTAAGG.. .......... .......... 98 CTTGTACTCA GTAGAATAGT CTTATTTTGA CTCTAACTGA CATTCGGATT GGAGGCTTAA 152081 .......... .......... .......... .......... .......... .......... 98 TAATATGATC CGTGCTGTTG ACATTGGCAC CTATCTGACT TTGTTTTAGT TAAAAATGTC 152141 .......... .......... .......... .......... .......... .......... 98 TAACACCTGT ATGCTCGTAG ATATGAAGAT TAGGTGCTTG AATGTTCATC TAAAGTGTTT 152201 .......... .......... .......... .......... .......... .......... 98 GCACTAAATA GTAATAGCTA CTGCTATGAA TAATATGCTC CCTAATTCTG ATGTAAATTC 152261 .......... .......... .......... .......... .......... .......... 98 TCTGATCCTT TGAGATAATG TAGATCAAAG CTTCACACAA GGAGGTTGAG AGAATGCTGC 152321 .......... .......... .......... .......... .......... .......... 98 GGGAACATAG GTATACCACG TAGTTTGAAT TTTTTTCGTT TCTTGTCTAA TCTGAAGATT 152381 .......... .......... .......... .......... .......... .......... 98 ACTCTGCTCC TCGGGTTGGA AAAATATTCA TCTGAATGTA GGCTTTAAGC AACTCACCTT 152441 .......... .......... .......... .......... .......... .......... 98 TCCCATATTC TTCTTGACCT TTCAAGAAAA ATTATTTTAA CACAATTGAA TGCTAGTTTG 152501 .......... .......... .......... .......... .......... .......... 98 CAGTGTATGT TCTTTTATTT ACCTTACAGC TGTTTCTCGT AAAGCTTATA AAGTAGTAGA 152561 .......... .......... .......... .......... .......... .......... 98 CTTTCTGAAA GAGAGTTTTA ATAATTAGTT TTAAACTTGT TTAAAGTTGA ATTGAAGGCA 152621 .......... .......... .......... .......... .......... .......... 98 TGTCTTGTGA TTAGCTTTAC TCTAATATAT TCTAGTTGAG GTTTGATGGG ACATTTCAGT 152681 .......... .......... .......... .......... .......... .......... 98 ATCCTTCATC TTTCTTACAG CATGTAGGTA AAGAGTCATT TAGTAATTGA CCTGCTCGAG 152741 .......... .......... .......... .......... .......... .......... 98 CCCCTTGTCC TCAGCCAAGT GGCTGAGAAT GTAAAATCCA GCATGTTGAT GAAGTTCTTT 152801 .......... .......... .......... .......... .......... .......... 98 TTTTTTTTTT ACTTTTTGAT GAAGTAAAGT GTACTTGTAT ATTTTCTTCT GATATGAAAA 152861 .......... .......... .......... .......... .......... .......... 98 AAGAAAACGC TATGTTATGC TTGACAAACA AGTATAACCC AGCACCAATA ACAGTACGTA 152921 .......... .......... .......... .......... .......... .......... 98 CCTCATAAAC TGCTTGTTAG CTAAACTAAC GGCATTTATC TGATGAATTA TTTTCTCTGT 152981 .......... .......... .......... .......... .......... .......... 98 TTTTAGTTTT ACTGAAGATA CACAAGTAGA AATTGTTGAA GAAGAAGTTT GAAAATATAT 153041 .......... .......... .......... .......... .......... .......... 98 ATCTGTATGA TTGTGTGTGC TGTTGCTTTG TTTTTGTTGT TATTGCTCTT TCCCCCCTCC 153101 .......... .......... .......... .......... .......... .......... 98 CCCCTGAAAT AGTTATCATT GCATTGTGGA TATTTCAATC TCATCAACTA TATATAGCTC 153161 .......... .......... .......... .......... .......... .......... 98 ATCCATTCAT TATACTTCTT TCCTCTCCAG CTGTTGAATC AATTGGCAAA ACTAGTAATG 153221 .......... .......... .......... .......... .......... .......... 98 ATAGGCTATA GTATGATTAA TGGATCCTAT TCATGCTATC TTTTGCACTT ACATAATTTC 153281 .......... .......... .......... .......... .......... .......... 98 ATCGACATCT GATGCGATGC TAATAATTTC TTGGTGTATC GATATTCTTC ACAGATCTAC 153341 .......... .......... .......... .......... .......... .......... 98 TTCTATGCAA GGTAAATTGT TAAAGCACAA CCTCGCTGCA GAAGTTGTGG ATGCTCTTAA 153401 .......... .......... .......... .......... .......... .......... 98 GGACCTCAGG GACCAGCTTT CTCAAAATGA GATGCGCAGA TGACAAGTCT CACAAAAGGC 153461 .......... .......... .......... .......... .......... .......... 98 TATGTCAGAG ACAAAACAGA ATTTTAAGTC AATGGATGTT AAGTTCTAAC TGCACTAGTA 153521 .......... .......... .......... .......... .......... .......... 98 ACTTTGTGAC AGTATATTTG GATGAGTGTT ATCGATACAT GTATACTAAA TGTTTCAACC 153581 .......... .......... .......... .......... .......... .......... 98 ACACGTGTAC ATCTTGTGCT GATGATACGT TAAACATGCA AAGATCATGT TCCTGCCTCA 153641 .......... .......... .......... .......... .......... .......... 98 AATTATGCAT AGTGGTCTAG TTTGCCTTGT TCATTCCCGT GCAGTGAATT ATTTATGGGT 153701 .......... .......... .......... .......... .......... .......... 98 AAATTCTGAC ATGATACTTA ACTAATGATG GAAATTGCAA AACTAAATTT CATAATCCAG 153761 .......... .......... .......... .......... .......... .......... 98 ATAAATCATC CATAAGTAGC AGAATCTAAA ACTCGTACTT TCGCCTAGAA AAATACATTT 153821 .......... .......... .......... .......... .......... .......... 98 ACACATTATT TTCAAAGCCC AACCCGCCTA TTGCTCATAT TTTCCTTAAA TGACAAATTA 153881 .......... .......... .......... .......... .......... .......... 98 CAGAAATAAC ATACTTTTAA GTGAATAGAG TAAAATCTAC TTGCACTAAA TAAAATAGAG 153941 .......... .......... .......... .......... .......... .......... 98 TAAAATTCAC ATGATTTTAG CACGTTAGTA GGTTTAGAGT AAAAATCCAC TTTCGGGTCA 154001 .......... .......... .......... .......... .......... .......... 98 GGTATGCTTC ATTAATAACG TGACGAGTCC CCAATGACGG TCCATAGCAG TTGTGACGGT 154061 .......... .......... .......... .......... .......... .......... 98 CCGTCGTTGG TTCAGTCGCG TGTGCCCTAG TTTTAAAAAT AACAGAAAGA CATACCTGAC 154121 .......... .......... .......... .......... .......... .......... 98 ACGACGGATT CATGCGACAG TCCGTCGCAT GAGTGACGGT CCATCCTCGT GTGCGTCAGT 154181 .......... .......... .......... .......... .......... .......... 98 GACTGTTGCA GAGTGATTTT TTGCAGAATT TCCTGGTGAT GTACCTGCAA ATTTAAAACC 154241 .......... .......... .......... .......... .......... .......... 98 CATGAGTAGA AAATGCTACC ATTACTAGAA AGAAAAACTA TAAGTATTGG GTTGCCTCCC 154301 .......... .......... .......... .......... .......... .......... 98 AACAAGCGCC TAATTTAACG TCGAAGCACG ACTGAGGACA CTTGATTACT CAGAATTCAT 154361 .......... .......... .......... .......... .......... .......... 98 CAAGATGGTA TGCCTCGATG ACTTCATTCG CTGATTCAGC ATGCCCGAAA TAGATTTTTA 154421 .......... .......... .......... .......... .......... .......... 98 TGTGTTGTCC ATTCACCTTG AACCGCACAC CCTCCTTAGT TTCCAACTCA ATTGCTCCAT 154481 .......... .......... .......... .......... .......... .......... 98 GAGGGAATAG TTGGGTAACC ATGTAAGGAC TAGTCCATTT GGACTTGAGC TTGCCCGGAA 154541 .......... .......... .......... .......... .......... .......... 98 ACAAGCGCAA CCTAGAATTG AATAAAAGCA CCAAATCCCC GACCATAAAC TCTCGTTTTC 154601 .......... .......... .......... .......... .......... .......... 98 CAATTTTTTG GTCATGGTAC TTCTTCATCT TTTCTTTGTA TAGGGCTAAG CTTTCAGGCG 154661 .......... .......... .......... .......... .......... .......... 98 AAATTCATCG AGCTCATTCA ACCCAGTTAA CCGTTGTTCT GCAGCTTCGC TCCAATCCAT 154721 .......... .......... .......... .......... .......... .......... 98 TTCAACTTCT TCATAGCCCG CATGGTTTTA TGCTCTAACT TAATCGGAAG ATGAAAAGCT 154781 .......... .......... .......... .......... .......... .......... 98 TTCCCATATA CAAGTTGGTA TAGGGACATT CTTTAACGTT GTCCGGTAGG CCCAAAGAGC 154841 .......... .......... .......... .......... .......... .......... 98 ATCATCAAGT CTCCTTGACC AATCCGTTCT ACTAGCGTTC ACCGTTTTTT ATAATATCTG 154901 .......... .......... .......... .......... .......... .......... 98 TTTGATCTCC CGATTCGACA CTTCAACTTG CCACTAGTTT GAGGGTGGTA GGCAGTGGCC 154961 .......... .......... .......... .......... .......... .......... 98 ACATTATGGC GAACCCCATA TTTCTCCAAT AACCCCTTGA ACAATCTGTT GCAGAAGTGG 155021 .......... .......... .......... .......... .......... .......... 98 GAGCCCCCCA TCACTAATAA TTACCCTTGG GGTGCCAAAA CGAGAGAATA TATTCTTTTT 155081 .......... .......... .......... .......... .......... .......... 98 TTAGAATGCA GTGACACTCT TCCCTTCATT GTTTGCAAGG GCGATGGTTT CGACCCATTT 155141 .......... .......... .......... .......... .......... .......... 98 AGATACATAA TCAACCGCTA CTAGAATGTA CTTCATTCCA TGAGAACTCA CAAAAGGGCC 155201 .......... .......... .......... .......... .......... .......... 98 CATAAAGTCA ATACCCCAAA CATTAAATAA CTCAATCACA AGAATGAGGT TTAGAGGGAG 155261 .......... .......... .......... .......... .......... .......... 98 CTCTTGCTTT CTTAAAATGC CGCCATCTCG TGGGCATCGA TCACATGCTT TAGCAAACTC 155321 .......... .......... .......... .......... .......... .......... 98 ATGAGCATCT TGATGAAGAG TTAGCCAATG TAACCACATT GTAATATCTT ATGAGCGGTT 155381 .......... .......... .......... .......... .......... .......... 98 CGGATACCGC TATGATGTCC ACAAACGGGT GAGGAATGGC ATGCTTCTAA CACACTCAAC 155441 .......... .......... .......... .......... .......... .......... 98 ATCTCACATT CTGGCACAAA ACACCGAATA AGCCCGTCGG CACAACTCTT ATATAAGTAT 155501 .......... .......... .......... .......... .......... .......... 98 GGTTCATCCC AAAAGAACAT CTTCACATCG TACATGAACT TTTCTTTTGA TGAAAGGACA 155561 .......... .......... .......... .......... .......... .......... 98 AGTTCGATGG AACAATATCA CTAGCCAGAT AGTTCGCAAA ATCTGCGAAC CATGGAGTCA 155621 .......... .......... .......... .......... .......... .......... 98 AGTCTTATGA AGCAGCCAAT ACATGCTCAT CGGGGAAAGT ATCATCAATG TCAGTCTTAT 155681 .......... .......... .......... .......... .......... .......... 98 CCCCTAACTC TCTCATAGCT TCATCCTCTA GATGGGACAA ATGATCAACA ACCTGATTTT 155741 .......... .......... .......... .......... .......... .......... 98 CAGTTCCTTT TCAATCCATC ACTTCAAAGT CAAATTCTTG TAGCAGTAAT ACCTAACAAA 155801 .......... .......... .......... .......... .......... .......... 98 TCAACCTAGG TTTCGCATCC TTCTTTGCTA TCAAATATCT CAACGCTGAG TGGTCAGTAT 155861 .......... .......... .......... .......... .......... .......... 98 GAACTATAAC TCTAGTACCT AGAAAATAGG AGAGAAATTT TTCAAAAGGA AAGACTACTG 155921 .......... .......... .......... .......... .......... .......... 98 CAAGGAGTTC TTGCTCAGTC ACTGTGTAGT TCTTCTGAGC TTCATTTAGG GCTTTACTAG 155981 .......... .......... .......... .......... .......... .......... 98 CATGGTAAAT GGGGTGAAGG ATTTTGTTCT TTCTTTATCC CAATACTACA CCAAGAACAA 156041 .......... .......... .......... .......... .......... .......... 98 CCCCACTAGC ATCACACATC ACCTTAAATG GACTGTTTTA ATCCGGAGAA ATAATGATAG 156101 .......... .......... .......... .......... .......... .......... 98 GTGCAGACAC CATTTTTTCT TTTAGCTCGC CGAATGCTTT AAGACAGGAT TCATCAAAAC 156161 .......... .......... .......... .......... .......... .......... 98 AAAATTTACA ATCTTTTTCC AGCACTTTGC ACAATGGATG TGCAATATTT GAAAAGTCTT 156221 .......... .......... .......... .......... .......... .......... 98 TGATGAATCT CCGGTAAAAA CCTGCATGCC CAAGAAAGCT TCTCACACCT TTCACAGAGA 156281 .......... .......... .......... .......... .......... .......... 98 TCGGTGGGGG AAGTCTCTCT ATTACCTCGA CTTTAGCTCG ATCAACCTCT ATGCCCTTTT 156341 .......... .......... .......... .......... .......... .......... 98 CTAAACTGTC ATGACCCAAA ACAATACCTT CTTTCACCAT GAAATGACAT TTTTTCCAAT 156401 .......... .......... .......... .......... .......... .......... 98 TTAGTACTAA ATTGCAGTCT TCACTTCTCT TAAGGACCTC AGATAAATTG TTCAAACACC 156461 .......... .......... .......... .......... .......... .......... 98 GCTCGAATGA ATCACAAACC ACAGAAAAAT CATCCATAAA AACTTCTATA GTTTCTTCCA 156521 .......... .......... .......... .......... .......... .......... 98 CCATGTCGGA AAATATCAAC ATCATACATC TCTGAAATGT GGCGGGTGCA TTGCACAACC 156581 .......... .......... .......... .......... .......... .......... 98 CAAACGACAT TCTTTTGAAT GCAAAGGTCT CATATGGACA AGTAAAAGTG GTTTTCTCTT 156641 .......... .......... .......... .......... .......... .......... 98 GATCTTCTGG TGCAATAGAA ATCTGATTAT ACCCCGAATA TCTATCAAGA AAACAGTACC 156701 .......... .......... .......... .......... .......... .......... 98 ACCCTTTTCC GGGCAAGTCT ATCCAACATC TGATCCATGA AGGGCATAGG AAAGTGGTCT 156761 .......... .......... .......... .......... .......... .......... 98 TTTTCAGTCC ATGCATTTAA TTTGCGGTAA TCCATAAACA CCCTCCATCC AGTAACCAGT 156821 .......... .......... .......... .......... .......... .......... 98 CTCATTCGAA CAAGTTCATT TTTTTCATTG GGGACCACAG TCATTCCCCT TTCTTAGGTA 156881 .......... .......... .......... .......... .......... .......... 98 CACACTGAAC AGGGCATACC CATCTACTAT CGGCGATCGG ATAGATTACT CCGGCATCCA 156941 .......... .......... .......... .......... .......... .......... 98 ACCACTTAAT GATTTCCTTC TTCATGACCT CTTGCATAGG TGGATTTAAG CGTCTCTGGT 157001 .......... .......... .......... .......... .......... .......... 98 GCTTAATACT TGGCTTATGA TCAGGCATGA GTTGGATTTT ATGAGAGCAA ATACCAGGAG 157061 .......... .......... .......... .......... .......... .......... 98 GGATCCCAAT AATGTCCGCA ATAGTCTACC TAATAGCTCT TTTGAACCTT TTTAGCACTT 157121 .......... .......... .......... .......... .......... .......... 98 TCACCAAACT CTCTATTTGT TGTTCATTCA GGTCTGATGC AATGATTACT GACAAAGTGT 157181 |||| | .......... .......... .......... .TTCTGGT.. .......... .......... 105 CACCATTTCC TAAGAATTCG TACTTGAGAT GAGGTGGGAG AGCTTTTAGT TCTAACTTTG 157241 .......... .......... .......... .......... .......... .......... 105 GAGCCTCTTG TATAGATGGT TTCGCGGGTG GGAACTCGCG ATTCTTCATA TCTAACTCAT 157301 .......... .......... .......... .......... .......... .......... 105 ATTTCTTCGG TTTAAACCGA ACATCACCTC GATCAAGAGC CGCGACTAAT GACTCATACT 157361 .......... .......... .......... .......... .......... .......... 105 CTTCAATGCA ATCGCTATCA AAATTCATTA TCACTGCCGC TAATGCTTCT ACACCTAGAC 157421 .......... .......... .......... .......... .......... .......... 105 GTTCTTCTAT TTGTGTCTCA GATGTCTCAC CAAT 157455 | || |||| ||| .......... .......... .AAGT-TCAC TAAT 117 hqPGS_C10HBa0115K16.1+_SGN-E250381- (151902 151999) ******************************************************************************** EST sequence 136 +strand 594 n (File: SGN-E350708+) 1 GGGGATTTAG TGCTTCTATT CAATTCCAGA TTGCGCTTGT TTCCAGGCAA ACTCAAGTCC 61 AAATGGACTG GTCCTTACAC GGTTACCCAA CTATTCCCTC ATGGAGCAGT TGAGTTGGAA 121 ACGAAGGAGG GTGTGCGGTT CAAGGTGAAT GGACAGCGCA TAAAAATCTA TCTCGGACAT 181 GCTGAATCGG CGAATGAAGT GATCGAGGCA TACCATCTTG ATGAAGTCTG AGTAATCAAG 241 TGGCCCCAGT CGTGCCGCGA CATTAAATCA GGCGCTTGTT GGGAGGCAAC CCAATACTTA 301 TCGTCTTTTT AATAATGGTA GCATTTTTTT CTATAAATGG GTTTTAAATT TGCAGGCACA 361 TCACCAAGAA ATTCTGCAGA AAACTACTCC GCAGTAGCCA CTGACGGATA CAACAACGGA 421 CCGTCGTATG CATCCGTCAC ACCAGGTATG TATTTCTGTC ATTTTTGAAA TTAGGGCGCA 481 TACGACGGAA CCTACGATGG GGCGTCGCAA GTGCGATGGA CCGTCGTCGG GGAACCGTTG 541 CGCGATTAAT GAAATCTNAC CGACCCACCC GGCTGGACCT TTTCAAATCT GACC Predicted gene structure (within gDNA segment 155640 to 150741): Exon 1 154581 153992 ( 590 n); cDNA 1 568 ( 568 n); score: 0.819 Intron 1 153991 153461 ( 531 n); Pd: 0.893 (s: 0.66), Pa: 0.956 (s: 0) Exon 2 153460 153438 ( 23 n); cDNA 569 591 ( 23 n); score: 0.478 MATCH C10HBa0115K16.1- SGN-E350708+ 0.819 613 1.032 C PGS_C10HBa0115K16.1-_SGN-E350708+ (154581 153992,153460 153438) Alignment (genomic DNA sequence = upper lines): GGGGATTTGG TGCTTTTATT CAATTCTAGG TTGCGCTTGT TTCCGGGCAA GCTCAAGTCC 154522 |||||||| | ||||| |||| |||||| || |||||||||| |||| ||||| ||||||||| GGGGATTTAG TGCTTCTATT CAATTCCAGA TTGCGCTTGT TTCCAGGCAA ACTCAAGTCC 60 AAATGGACTA GTCCTTACAT GGTTACCCAA CTATTCCCTC ATGGAGCAAT TGAGTTGGAA 154462 ||||||||| ||||||||| |||||||||| |||||||||| |||||||| | |||||||||| AAATGGACTG GTCCTTACAC GGTTACCCAA CTATTCCCTC ATGGAGCAGT TGAGTTGGAA 120 ACTAAGGAGG GTGTGCGGTT CAAGGTGAAT GGACAACACA TAAAAATCTA TTTCGGGCAT 154402 || ||||||| |||||||||| |||||||||| ||||| | || |||||||||| | |||| ||| ACGAAGGAGG GTGTGCGGTT CAAGGTGAAT GGACAGCGCA TAAAAATCTA TCTCGGACAT 180 GCTGAATCAG CGAATGAAGT CATCGAGGCA TACCATCTTG ATGAATTCTG AGTAATCAAG 154342 |||||||| | |||||||||| ||||||||| |||||||||| ||||| |||| |||||||||| GCTGAATCGG CGAATGAAGT GATCGAGGCA TACCATCTTG ATGAAGTCTG AGTAATCAAG 240 TGTCCTCAGT CGTGCTTCGA CGTTAAATTA GGCGCTTGTT GGGAGGCAAC CCAATACTTA 154282 || || |||| ||||| ||| | |||||| | |||||||||| |||||||||| |||||||||| TGGCCCCAGT CGTGCCGCGA CATTAAATCA GGCGCTTGTT GGGAGGCAAC CCAATACTTA 300 TAGTTTTTCT TTCTAGTAAT GGTAGCATTT TCTACTCATG GGTTTTAAAT TTGCAGGTAC 154222 | || ||| | | || | | | | ||| |||| ||| |||||||||| ||||||| || TCGTCTTT-T TAATAATGGT AGCATTTTTT TCTATAAATG GGTTTTAAAT TTGCAGGCAC 359 ATCACCAGGA AATTCTGCAA AAAATCACTC TGCAACAGTC ACTGACGCAC ACGAGGATGG 154162 ||||||| || ||||||||| |||| |||| ||| || | ||| | || |||| ATCACCAAGA AATTCTGCAG AAAACTACTC CGCAGTAGCC ACT---G--- AC--GGAT-- 409 ACCGTCACTC ATGCGACGGA CTGTCGCATG AATCCGTCGT GTCAGGTATG TCTTTCTGTT 154102 | || | | ||||| | |||| ||| ||||||| |||||||| | ||||||| A----CA--- A--CAACGGA CCGTCGTATG CATCCGTCAC ACCAGGTATG TATTTCTGTC 460 ATTTTTAAAA CTAGGGCACA CGCGACTGAA CCAACGACGG ACCGTCACAA CTGCTATGGA 154042 |||||| ||| |||||| || |||| ||| || |||| || |||| ||| ||| ||||| ATTTTTGAAA TTAGGGCGCA TACGACGGAA CCTACGATGG GGCGTCGCAA GTGCGATGGA 520 CCGTCATTGG GGACTCGTCA CGTTATTAAT GAAGCATACC TGACCCGAAA GTGGATTTTT 153982 ||||| | || ||| ||| || |||||| ||| | | ||||| | CCGTCGTCGG GGAACCGTTG CGCGATTAAT GAAATCTNAC CGACCC--AC .......... 568 ACTCTAAACC TACTAACGTG CTAAAATCAT GTGAATTTTA CTCTATTTTA TTTAGTGCAA 153922 .......... .......... .......... .......... .......... .......... 568 GTAGATTTTA CTCTATTCAC TTAAAAGTAT GTTATTTCTG TAATTTGTCA TTTAAGGAAA 153862 .......... .......... .......... .......... .......... .......... 568 ATATGAGCAA TAGGCGGGTT GGGCTTTGAA AATAATGTGT AAATGTATTT TTCTAGGCGA 153802 .......... .......... .......... .......... .......... .......... 568 AAGTACGAGT TTTAGATTCT GCTACTTATG GATGATTTAT CTGGATTATG AAATTTAGTT 153742 .......... .......... .......... .......... .......... .......... 568 TTGCAATTTC CATCATTAGT TAAGTATCAT GTCAGAATTT ACCCATAAAT AATTCACTGC 153682 .......... .......... .......... .......... .......... .......... 568 ACGGGAATGA ACAAGGCAAA CTAGACCACT ATGCATAATT TGAGGCAGGA ACATGATCTT 153622 .......... .......... .......... .......... .......... .......... 568 TGCATGTTTA ACGTATCATC AGCACAAGAT GTACACGTGT GGTTGAAACA TTTAGTATAC 153562 .......... .......... .......... .......... .......... .......... 568 ATGTATCGAT AACACTCATC CAAATATACT GTCACAAAGT TACTAGTGCA GTTAGAACTT 153502 .......... .......... .......... .......... .......... .......... 568 AACATCCATT GACTTAAAAT TCTGTTTTGT CTCTGACATA GCCTTTTGTG AGACTTGTCA 153442 || || || | .......... .......... .......... .......... .CCGGCTGGA CCTTTTCAAA 587 TCTG 153438 |||| TCTG 591 hqPGS_C10HBa0115K16.1-_SGN-E350708+ (154581 153992) ******************************************************************************** EST sequence 201 -strand 696 n (File: SGN-E395434-) 1 ATCAAATAAC TCAATCACAA GAATGGGGTT TAGAGGGAGC TCTTGCTTTC TTGAAATTCC 61 TTCATCTCTT TGGCATCTAT CACATGCTTT AACAAAATGA GGAGCATATT GATGAAGAGT 121 GGGGCAATAG TAACCACATT GTAATATCTT ATGAGTGGTT CGGATACCAC TATGATGTCC 181 ACCAATGGGT GAGGAATGGC AAGCCTCTAA AACACTCAAC ATCTCACATT CTGGCACACA 241 ACACTGAATA AGCCCTATGG CACAACTACT GTAAAAATAT GGTTCATCCC AATAGAACAA 301 CTTCACATCG TGCATGAACT TTTTTCTTTG ATGAAAGGAC AAGTCCGATG GAATAATATC 361 ACTAGCCAGA TAGTTCTCGA AATCTGCGAA CCATGTAATA AAGTCTTGTG AGGCAGCCAA 421 TACATGCTCA GACTTATACC CTAAATCTCT CATAGATTCA TCTTCTAGTT AGGACGAGTG 481 ATTGGCAACT TGATTTTTGA TTCCTTTTCT ATCCCTCACT TCAAAGTCAA ATTTGTGTAG 541 CAGTAATACC TAACGAATTA ACCTCGGTTT CACATCCTTA TTTTCCATCA AATATCTCAA 601 TGCTGAATGG TCAGTATGAA CTATAACTCT AGTACCTAGC AAATCAGAGC AAAATTTTTC 661 AAAAGCAAAG ACTACTGCAA GGAGTTCTTG CTCAGT Predicted gene structure (within gDNA segment 154586 to 156540): Exon 1 155223 155645 ( 423 n); cDNA 1 425 ( 425 n); score: 0.877 Intron 1 155646 155675 ( 30 n); Pd: 0.000 (s: 0.86), Pa: 0.000 (s: 0.52) ?? Exon 2 155676 155940 ( 265 n); cDNA 426 696 ( 271 n); score: 0.815 MATCH C10HBa0115K16.1+ SGN-E395434- 0.853 688 0.989 C PGS_C10HBa0115K16.1+_SGN-E395434- (155223 155645,155676 155940) Alignment (genomic DNA sequence = upper lines): ATTAAATAAC TCAATCACAA GAATGAGGTT TAGAGGGAGC TCTTGCTTTC TTAAAATGCC 155282 || ||||||| |||||||||| ||||| |||| |||||||||| |||||||||| || |||| || ATCAAATAAC TCAATCACAA GAATGGGGTT TAGAGGGAGC TCTTGCTTTC TTGAAATTCC 60 GCCATCTCGT GGGCATCGAT CACATGCTTT AGCAAACTCA TGAGCATCTT GATGAAGAGT 155342 |||||| | |||||| || |||||||||| | |||| | | |||||| || |||||||||| TTCATCTCTT TGGCATCTAT CACATGCTTT AACAAAATGA GGAGCATATT GATGAAGAGT 120 TAGCCAAT-G TAACCACATT GTAATATCTT ATGAGCGGTT CGGATACCGC TATGATGTCC 155401 | |||| | |||||||||| |||||||||| ||||| |||| |||||||| | |||||||||| GGGGCAATAG TAACCACATT GTAATATCTT ATGAGTGGTT CGGATACCAC TATGATGTCC 180 ACAAACGGGT GAGGAATGGC ATGCTTCTAA CACACTCAAC ATCTCACATT CTGGCACAAA 155461 || || |||| |||||||||| | || ||||| ||||||||| |||||||||| |||||||| | ACCAATGGGT GAGGAATGGC AAGCCTCTAA AACACTCAAC ATCTCACATT CTGGCACACA 240 ACACCGAATA AGCCCGTCGG CACAACTCTT ATATAAGTAT GGTTCATCCC AAAAGAACAT 155521 |||| ||||| ||||| || ||||||| | || || ||| |||||||||| || |||||| ACACTGAATA AGCCCTATGG CACAACTACT GTAAAAATAT GGTTCATCCC AATAGAACAA 300 CTTCACATCG TACATGAACT TTTCT-TTTG ATGAAAGGAC AAGTTCGATG GAACAATATC 155580 |||||||||| | |||||||| ||| | |||| |||||||||| |||| ||||| ||| |||||| CTTCACATCG TGCATGAACT TTTTTCTTTG ATGAAAGGAC AAGTCCGATG GAATAATATC 360 ACTAGCCAGA TAGTTCGCAA AATCTGCGAA CCATGGAGTC AAGTCTTATG AAGCAGCCAA 155640 |||||||||| |||||| | | |||||||||| ||||| | | ||||||| || | |||||||| ACTAGCCAGA TAGTTCTCGA AATCTGCGAA CCATGTAATA AAGTCTTGTG AGGCAGCCAA 420 TACATGCTCA TCGGGGAAAG TATCATCAAT GTCAG--TC- ---TTATCCC CTAACTCTCT 155694 ||||| || |||| || |||| ||||| TACAT..... .......... .......... .....GCTCA GACTTATACC CTAAATCTCT 450 CATAGCTTCA TCCTCTAGAT GGGACAAATG ATCAACAACC TGATTTTCAG TTCCTTTTCA 155754 ||||| |||| || ||||| | |||| | || || |||| ||||||| ||||||||| CATAGATTCA TCTTCTAGTT AGGACGAGTG ATTGGCAACT TGATTTTTGA TTCCTTTTCT 510 ATCCATCACT TCAAAGTCAA ATTCTTGTAG CAGTAATACC TAACAAATCA ACCTAGGTTT 155814 |||| ||||| |||||||||| ||| ||||| |||||||||| |||| ||| | |||| ||||| ATCCCTCACT TCAAAGTCAA ATTTGTGTAG CAGTAATACC TAACGAATTA ACCTCGGTTT 570 CGCATCCTTC TTTGCTATCA AATATCTCAA CGCTGAGTGG TCAGTATGAA CTATAACTCT 155874 | ||||||| ||| | |||| |||||||||| ||||| ||| |||||||||| |||||||||| CACATCCTTA TTTTCCATCA AATATCTCAA TGCTGAATGG TCAGTATGAA CTATAACTCT 630 AGTACCTAGA AAATAGGAGA GAAATTTTTC AAAAGGAAAG ACTACTGCAA GGAGTTCTTG 155934 ||||||||| |||| ||| ||||||||| ||||| |||| |||||||||| |||||||||| AGTACCTAGC AAATCAGAGC AAAATTTTTC AAAAGCAAAG ACTACTGCAA GGAGTTCTTG 690 CTCAGT 155940 |||||| CTCAGT 696 hqPGS_C10HBa0115K16.1+_SGN-E395434- (155223 155645,155676 155940) ******************************************************************************** EST sequence 190 -strand 487 n (File: SGN-E205922-) 1 AAAACACTCA ACATCTCACA TTCTGGCACA CAACACTGAA TAAGCCCTAT GGCACAACTA 61 CTGTAAAAAT ATGGTTCATC CCAATAGAAC AACTTCACAT CGTGCATGAA CTTTTTTCTT 121 TGATGAAAGG ACAAGTCCGA TGGAATAATA TCACTAGCCA GATAGTTCTC GAAATCTGCG 181 AACCATGTAA TAAAGTCTTG TGAGGCAGCC AATACATGCT CAGACTTATA CCCTAAATCT 241 CTCATAGATT CATCTTCTAG TTAGGACGAG TGATTGGCAA CTTGATTTTT GATTCCTTTT 301 CTATCCCTCA CTTCAAAGTC AAATTTGTGT AGCAGTAATA CCTAACGAAT TAACCTCGGT 361 TTCACATCCT TATTTTCCAT CAAATATCTC AATGCTGAAT GGTCAGTATG AACTATAACT 421 ATAGTACCTA GCAAATCAGA GCAAAATCTT TCAAAAGCAA AGACTACTGC AAGGAGTTCT 481 TGCTCAG Predicted gene structure (within gDNA segment 153757 to 157808): Exon 1 155430 155645 ( 216 n); cDNA 1 217 ( 217 n); score: 0.877 Intron 1 155646 155675 ( 30 n); Pd: 0.000 (s: 0.86), Pa: 0.000 (s: 0.52) ?? Exon 2 155676 155939 ( 264 n); cDNA 218 487 ( 270 n); score: 0.807 MATCH C10HBa0115K16.1+ SGN-E205922- 0.839 480 0.986 C PGS_C10HBa0115K16.1+_SGN-E205922- (155430 155645,155676 155939) Alignment (genomic DNA sequence = upper lines): AACACACTCA ACATCTCACA TTCTGGCACA AAACACCGAA TAAGCCCGTC GGCACAACTC 155489 || ||||||| |||||||||| |||||||||| ||||| ||| ||||||| ||||||||| AAAACACTCA ACATCTCACA TTCTGGCACA CAACACTGAA TAAGCCCTAT GGCACAACTA 60 TTATATAAGT ATGGTTCATC CCAAAAGAAC ATCTTCACAT CGTACATGAA CTTTTCT-TT 155548 | || || | |||||||||| |||| ||||| | |||||||| ||| |||||| ||||| | || CTGTAAAAAT ATGGTTCATC CCAATAGAAC AACTTCACAT CGTGCATGAA CTTTTTTCTT 120 TGATGAAAGG ACAAGTTCGA TGGAACAATA TCACTAGCCA GATAGTTCGC AAAATCTGCG 155608 |||||||||| |||||| ||| ||||| |||| |||||||||| |||||||| | ||||||||| TGATGAAAGG ACAAGTCCGA TGGAATAATA TCACTAGCCA GATAGTTCTC GAAATCTGCG 180 AACCATGGAG TCAAGTCTTA TGAAGCAGCC AATACATGCT CATCGGGGAA AGTATCATCA 155668 ||||||| | | ||||||| ||| |||||| ||||||| AACCATGTAA TAAAGTCTTG TGAGGCAGCC AATACAT... .......... .......... 217 ATGTCAG--T ----CTTATC CCCTAACTCT CTCATAGCTT CATCCTCTAG ATGGGACAAA 155722 | ||||| |||||| ||| ||||||| || |||| ||||| | |||| | .......GCT CAGACTTATA CCCTAAATCT CTCATAGATT CATCTTCTAG TTAGGACGAG 270 TGATCAACAA CCTGATTTTC AGTTCCTTTT CAATCCATCA CTTCAAAGTC AAATTCTTGT 155782 |||| ||| | ||||||| |||||||| | |||| ||| |||||||||| ||||| ||| TGATTGGCAA CTTGATTTTT GATTCCTTTT CTATCCCTCA CTTCAAAGTC AAATTTGTGT 330 AGCAGTAATA CCTAACAAAT CAACCTAGGT TTCGCATCCT TCTTTGCTAT CAAATATCTC 155842 |||||||||| |||||| ||| ||||| ||| ||| |||||| | ||| | || |||||||||| AGCAGTAATA CCTAACGAAT TAACCTCGGT TTCACATCCT TATTTTCCAT CAAATATCTC 390 AACGCTGAGT GGTCAGTATG AACTATAACT CTAGTACCTA GAAAATAGGA GAGAAATTTT 155902 || ||||| | |||||||||| |||||||||| ||||||||| | |||| || | |||| || AATGCTGAAT GGTCAGTATG AACTATAACT ATAGTACCTA GCAAATCAGA GCAAAATCTT 450 TCAAAAGGAA AGACTACTGC AAGGAGTTCT TGCTCAG 155939 ||||||| || |||||||||| |||||||||| ||||||| TCAAAAGCAA AGACTACTGC AAGGAGTTCT TGCTCAG 487 hqPGS_C10HBa0115K16.1+_SGN-E205922- (155430 155645,155676 155939) ******************************************************************************** EST sequence 79 +strand 719 n (File: SGN-E356787+) 1 TTTACTTCAT AGTCAAATTC TTGTAACAGT AATACCCAAC CAATCAACCT CGGTTTTGCA 61 TCCTTCTTTG CCATCAAATA TCTCAATGTT GAATGGTCAG TATGCACTAT AACTCTAGTA 121 CCTAGCAAAT AGGAGCAAAA TTTTTTGAAA GGAAAGACTA ATGTAAGGAG TTCTTGCTCA 181 GTCACTGTGT AGTTCTTGTG AGCTTCATTT AGGGCTTTAC TAGCATAGTA AATGGGGTGA 241 AGATTTTGTT CTTTATTTGT CCCAATACTA CACCAAGAGC AACCCCACTA GCATCGCACA 301 TCACCTCAAA TGGACTATTC CAATCCAGAG AAATAATGAT AGGTGTAGAC ACCAATTTTT 361 CTTTTAGATC GTCAAATGCT TTAAGACACG ATTCATCAAA ACAAAATTTA CAATCTTTCT 421 CCAGCAGTTT GCACAACGGA TGTGCAATCT TTGATGAATC TTCGGTAAAA ACCTACATGC 481 CCAAGAAAGC TTATCACACC TTTTACAGAG ATAGGTGGGG GAAGTCTCTC TATTACCTCG 541 ACTTTAACTC GATCAACCTC TATGCACTTT TCTGAAATGC GATGACCCAA AACAATACCT 601 TCTTTCACCA TGAAATGGCA TTTTTCCCAA TTTAGTACTA AATTACAGTC TTCACATCTC 661 TTAAGGACCT CAGGTAAATT GTTCAAACAC CGCTCGAATG AATCACCAAC CGCAGAAAA Predicted gene structure (within gDNA segment 153683 to 157216): Exon 1 155762 156489 ( 728 n); cDNA 4 719 ( 716 n); score: 0.907 MATCH C10HBa0115K16.1+ SGN-E356787+ 0.907 728 1.013 C PGS_C10HBa0115K16.1+_SGN-E356787+ (155762 156489) Alignment (genomic DNA sequence = upper lines): ACTTCAAAGT CAAATTCTTG TAGCAGTAAT ACCTAACAAA TCAACCTAGG TTTCGCATCC 155821 |||||| ||| |||||||||| || ||||||| ||| ||| || ||||||| || ||| |||||| ACTTCATAGT CAAATTCTTG TAACAGTAAT ACCCAACCAA TCAACCTCGG TTTTGCATCC 63 TTCTTTGCTA TCAAATATCT CAACGCTGAG TGGTCAGTAT GAACTATAAC TCTAGTACCT 155881 |||||||| | |||||||||| ||| | ||| |||||||||| | |||||||| |||||||||| TTCTTTGCCA TCAAATATCT CAATGTTGAA TGGTCAGTAT GCACTATAAC TCTAGTACCT 123 AGAAAATAGG AGAGAAATTT TTCAAAAGGA AAGACTACTG CAAGGAGTTC TTGCTCAGTC 155941 || ||||||| || |||||| || |||||| ||||||| || ||||||||| |||||||||| AGCAAATAGG AGCAAAATTT TTTGAAAGGA AAGACTAATG TAAGGAGTTC TTGCTCAGTC 183 ACTGTGTAGT TCTTCTGAGC TTCATTTAGG GCTTTACTAG CATGGTAAAT GGGGTGAAGG 156001 |||||||||| |||| ||||| |||||||||| |||||||||| ||| |||||| |||||||| | ACTGTGTAGT TCTTGTGAGC TTCATTTAGG GCTTTACTAG CATAGTAAAT GGGGTGAA-G 242 ATTTTGTTCT TTCTTTATCC CAATACTACA CCAAGAACAA CCCCACTAGC ATCACACATC 156061 |||||||||| || ||| ||| |||||||||| |||||| ||| |||||||||| ||| |||||| ATTTTGTTCT TTATTTGTCC CAATACTACA CCAAGAGCAA CCCCACTAGC ATCGCACATC 302 ACCTTAAATG GACTGTTTTA ATCCGGAGAA ATAATGATAG GTGCAGACAC CATTTTTTCT 156121 |||| ||||| |||| || | |||| ||||| |||||||||| ||| |||||| || ||||||| ACCTCAAATG GACTATTCCA ATCCAGAGAA ATAATGATAG GTGTAGACAC CAATTTTTCT 362 TTTAGCTCGC CGAATGCTTT AAGACAGGAT TCATCAAAAC AAAATTTACA ATCTTTTTCC 156181 ||||| ||| | |||||||| |||||| ||| |||||||||| |||||||||| |||||| ||| TTTAGATCGT CAAATGCTTT AAGACACGAT TCATCAAAAC AAAATTTACA ATCTTTCTCC 422 AGCACTTTGC ACAATGGATG TGCAATATTT GAAAAGTCTT TGATGAATCT CCGGTAAAAA 156241 |||| ||||| |||| ||||| ||| || |||| |||||||||| ||||||||| AGCAGTTTGC ACAACGGATG TGC------- ---AA-TCTT TGATGAATCT TCGGTAAAAA 471 CCTGCATGCC CAAGAAAGCT TCTCACACCT TTCACAGAGA TCGGTGGGGG AAGTCTCTCT 156301 ||| |||||| |||||||||| | |||||||| || ||||||| | |||||||| |||||||||| CCTACATGCC CAAGAAAGCT TATCACACCT TTTACAGAGA TAGGTGGGGG AAGTCTCTCT 531 ATTACCTCGA CTTTAGCTCG ATCAACCTCT ATGCCCTTTT CTAAACTGTC ATGACCCAAA 156361 |||||||||| ||||| |||| |||||||||| |||| ||||| || || || |||||||||| ATTACCTCGA CTTTAACTCG ATCAACCTCT ATGCACTTTT CTGAAATGCG ATGACCCAAA 591 ACAATACCTT CTTTCACCAT GAAATGACAT TTTTTCCAAT TTAGTACTAA ATTGCAGTCT 156421 |||||||||| |||||||||| |||||| ||| |||| ||||| |||||||||| ||| |||||| ACAATACCTT CTTTCACCAT GAAATGGCAT TTTTCCCAAT TTAGTACTAA ATTACAGTCT 651 TCACTTCTCT TAAGGACCTC AGATAAATTG TTCAAACACC GCTCGAATGA ATCACAAACC 156481 |||| ||||| |||||||||| || ||||||| |||||||||| |||||||||| ||||| |||| TCACATCTCT TAAGGACCTC AGGTAAATTG TTCAAACACC GCTCGAATGA ATCACCAACC 711 ACAGAAAA 156489 ||||||| GCAGAAAA 719 hqPGS_C10HBa0115K16.1+_SGN-E356787+ (155762 156489) ******************************************************************************** EST sequence 9 +strand 734 n (File: SGN-E577717+) 1 CTCTATGACT CTAGTACCTA GCAAATAGGA GCAAAATATC TCAAAAGCAA AGACTACTGC 61 GAGGAGTTCA TGCTCAGTCA CTGTGTAGTT CTTCTGGGCT TCATTTAGGG CTTTACTAGC 121 ATAGTAAATT GGGTGAAGGA TTTTGTTTCT TCTCTGTCCC AATACTACAC CAAGAGCCAC 181 CCCACTAGCA TCGCACATTA CCTCAAATGG ACTTTTCCAA TCCGGAGAAA TAATGATAGG 241 TGCAGACACT AACTTCTCTT TTAGCTCACT GAATGCTTTA AGACAGGACT CATCAAAACA 301 AAATTTACAT TCTTTCTTCA GTAATTTGCA CAATGGGTGT GCAATCTTTG AAAAGTCTTT 361 GATGAATCTC CGATAAAAAC CTGCATGCCC AAGAAAGCTT CTCACACCTT TCATAGAGAT 421 CGGTGGGGGA AGTCTCTCTA TTACCTCAAC TTTAGCTCGA TCAACCTCTA TTCCCTTTTC 481 TGAAATGCGA TGACCCAACA CAATACCTTT TTTTACCATG AAATGACACT TTTCCCAGTT 541 TAGTACCAGA TTGCAGTCTT CACATCTCTT AAGAACCTCA GATTAATTGG TCAAGCATCG 601 CTCAATTGAA TCACCAACCA CAGAAAAATC ATCCATAAAA ACCTCTATAG TATCCTCCAC 661 CATGTCAGAA AATATTGACA TCATATATCT CTGAAAGGTT GCGGGTGCAT TGCACAACCT 721 AAATGGCATT CTTC Predicted gene structure (within gDNA segment 154633 to 159573): Exon 1 155865 156595 ( 731 n); cDNA 3 733 ( 731 n); score: 0.897 MATCH C10HBa0115K16.1+ SGN-E577717+ 0.897 731 0.996 C PGS_C10HBa0115K16.1+_SGN-E577717+ (155865 156595) Alignment (genomic DNA sequence = upper lines): CTATAACTCT AGTACCTAGA AAATAGGAGA GAAATTTTTC AAAAGGAAAG ACTACTGCAA 155924 |||| ||||| ||||||||| ||||||||| |||| | || ||||| |||| |||||||| | CTATGACTCT AGTACCTAGC AAATAGGAGC AAAATATCTC AAAAGCAAAG ACTACTGCGA 62 GGAGTTCTTG CTCAGTCACT GTGTAGTTCT TCTGAGCTTC ATTTAGGGCT TTACTAGCAT 155984 ||||||| || |||||||||| |||||||||| |||| ||||| |||||||||| |||||||||| GGAGTTCATG CTCAGTCACT GTGTAGTTCT TCTGGGCTTC ATTTAGGGCT TTACTAGCAT 122 GGTAAATGGG GTGAAGGATT TTGTTCTTTC TTTATCCCAA TACTACACCA AGAACAACCC 156044 |||||| || |||||||||| ||||| ||| | | |||||| |||||||||| ||| | |||| AGTAAATTGG GTGAAGGATT TTGTTTCTTC TCTGTCCCAA TACTACACCA AGAGCCACCC 182 CACTAGCATC ACACATCACC TTAAATGGAC TGTTTTAATC CGGAGAAATA ATGATAGGTG 156104 |||||||||| ||||| ||| | |||||||| | || |||| |||||||||| |||||||||| CACTAGCATC GCACATTACC TCAAATGGAC TTTTCCAATC CGGAGAAATA ATGATAGGTG 242 CAGACACCAT TTTTTCTTTT AGCTCGCCGA ATGCTTTAAG ACAGGATTCA TCAAAACAAA 156164 ||||||| | || |||||| ||||| | || |||||||||| |||||| ||| |||||||||| CAGACACTAA CTTCTCTTTT AGCTCACTGA ATGCTTTAAG ACAGGACTCA TCAAAACAAA 302 ATTTACAATC TTTTTCCAGC ACTTTGCACA ATGGATGTGC AATATTTGAA AAGTCTTTGA 156224 ||||||| || ||| | ||| | |||||||| |||| ||||| ||| |||||| |||||||||| ATTTACATTC TTTCTTCAGT AATTTGCACA ATGGGTGTGC AATCTTTGAA AAGTCTTTGA 362 TGAATCTCCG GTAAAAACCT GCATGCCCAA GAAAGCTTCT CACACCTTTC ACAGAGATCG 156284 |||||||||| ||||||||| |||||||||| |||||||||| |||||||||| | |||||||| TGAATCTCCG ATAAAAACCT GCATGCCCAA GAAAGCTTCT CACACCTTTC ATAGAGATCG 422 GTGGGGGAAG TCTCTCTATT ACCTCGACTT TAGCTCGATC AACCTCTATG CCCTTTTCTA 156344 |||||||||| |||||||||| ||||| |||| |||||||||| ||||||||| ||||||||| GTGGGGGAAG TCTCTCTATT ACCTCAACTT TAGCTCGATC AACCTCTATT CCCTTTTCTG 482 AACTGTCATG ACCCAAAACA ATACCTTCTT TCACCATGAA ATGACATTTT TTCCAATTTA 156404 || || ||| |||||| ||| ||||||| || | |||||||| |||||| ||| | ||| |||| AAATGCGATG ACCCAACACA ATACCTTTTT TTACCATGAA ATGACACTTT TCCCAGTTTA 542 GTACTAAATT GCAGTCTTCA CTTCTCTTAA GGACCTCAGA TAAATTGTTC AAACACCGCT 156464 |||| | ||| |||||||||| | |||||||| | |||||||| | ||||| || || || |||| GTACCAGATT GCAGTCTTCA CATCTCTTAA GAACCTCAGA TTAATTGGTC AAGCATCGCT 602 CGAATGAATC ACAAACCACA GAAAAATCAT CCATAAAAAC TTCTATAGTT TCTTCCACCA 156524 | | |||||| || ||||||| |||||||||| |||||||||| |||||||| || ||||||| CAATTGAATC ACCAACCACA GAAAAATCAT CCATAAAAAC CTCTATAGTA TCCTCCACCA 662 TGTCGGAAAA TATCAACATC ATACATCTCT GAAATGTGGC GGGTGCATTG CACAACCCAA 156584 |||| ||||| ||| ||||| ||| |||||| |||| || || |||||||||| ||||||| || TGTCAGAAAA TATTGACATC ATATATCTCT GAAAGGTTGC GGGTGCATTG CACAACCTAA 722 ACGACATTCT T 156595 | | |||||| | ATGGCATTCT T 733 hqPGS_C10HBa0115K16.1+_SGN-E577717+ (155865 156595) ******************************************************************************** EST sequence 108 -strand 722 n (File: SGN-E577830-) 1 TCAAAGGATT TAGCACATCG TTAAAACTGA AGAAGGAGCA GGCTTGAATT CATAAGGACC 61 TCCTTTTACA CCCCAAACTT GATTGCCATC ATCATCAAAG CCTCTATCCC AGTCTCGAGA 121 AGTCACAAGT CATTGTTCAT ACACAGTAAA TACAATTATC ACAAGTAGTT GGTCCTCTCA 181 CGGAACACAA ATTAAAAGAG TTAGCTTCCT GGAACGTAGA AATTCAATCA AACTCTTAGC 241 ATGCTGGAAC ATGGAAATCC GATCCAAATT GTTCGCATGA CAAAATGTGG ATATTTGATC 301 CAAAGTTTTA TCATGCCGGA ACATGGCAAT ATGATTCCAA TCACATGCAA AATCACATCA 361 TCAAGATTAT ACAACAAGAG GTGGTTCATG GATTACAATT ATTTGTTCAT ACTCAATTAC 421 ATAGTGTGCG GTGAATAATG CAACATTCTC ATACATAGAT GTTTTATAAA TAAGCAATAA 481 CAAAAGAGAA ATAAAGCGAT CGTGTAAAGT AAATAACCCA ACTAATGTGG TTGGAATCGT 541 TCCCACAAGG AAAATAGTTT AGACTTAACT TCAATCTATT ATTATTGTTG TTCAGTCAAA 601 TATTTCCTTG GAAAACAAAA ATGATAAAAG GGGGGTTTTC TGTTTCTAAA TAAATGTAAA 661 TAACTAGCGA AATTAAAGGA GGAAACTAAC AGCTTCAAAT GGTGGAGTTT AATCAATTAA 721 TC Predicted gene structure (within gDNA segment 152682 to 160874): Exon 1 153688 153699 ( 12 n); cDNA 415 426 ( 12 n); score: 0.667 Intron 1 153700 155120 (1421 n); Pd: 0.317 (s: 0), Pa: 0.812 (s: 0) Exon 2 155121 155127 ( 7 n); cDNA 427 433 ( 7 n); score: 0.714 Intron 2 155128 157152 (2025 n); Pd: 0.235 (s: 0), Pa: 0.999 (s: 0) Exon 3 157153 157179 ( 27 n); cDNA 434 456 ( 23 n); score: 0.593 Intron 3 157180 157911 ( 732 n); Pd: 0.000 (s: 0), Pa: 0.403 (s: 0) Exon 4 157912 157921 ( 10 n); cDNA 457 466 ( 10 n); score: 0.800 Intron 4 157922 159862 (1941 n); Pd: 0.609 (s: 0), Pa: 0.000 (s: 0) Exon 5 159863 159888 ( 26 n); cDNA 467 491 ( 25 n); score: 0.692 Intron 5 159889 160007 ( 119 n); Pd: 0.983 (s: 0), Pa: 0.000 (s: 0.90) Exon 6 160008 160237 ( 230 n); cDNA 492 721 ( 230 n); score: 0.885 MATCH C10HBa0115K16.1+ SGN-E577830- 0.885 312 0.432 C PGS_C10HBa0115K16.1+_SGN-E577830- (153688 153699,155121 155127,157153 157179,157912 157921,159863 159888,160008 160237) Alignment (genomic DNA sequence = upper lines): AATTATTTAT GGGTAAATTC TGACATGATA CTTAACTAAT GATGGAAATT GCAAAACTAA 153747 ||||| || | AATTACATAG TG........ .......... .......... .......... .......... 426 ATTTCATAAT CCAGATAAAT CATCCATAAG TAGCAGAATC TAAAACTCGT ACTTTCGCCT 153807 .......... .......... .......... .......... .......... .......... 426 AGAAAAATAC ATTTACACAT TATTTTCAAA GCCCAACCCG CCTATTGCTC ATATTTTCCT 153867 .......... .......... .......... .......... .......... .......... 426 TAAATGACAA ATTACAGAAA TAACATACTT TTAAGTGAAT AGAGTAAAAT CTACTTGCAC 153927 .......... .......... .......... .......... .......... .......... 426 TAAATAAAAT AGAGTAAAAT TCACATGATT TTAGCACGTT AGTAGGTTTA GAGTAAAAAT 153987 .......... .......... .......... .......... .......... .......... 426 CCACTTTCGG GTCAGGTATG CTTCATTAAT AACGTGACGA GTCCCCAATG ACGGTCCATA 154047 .......... .......... .......... .......... .......... .......... 426 GCAGTTGTGA CGGTCCGTCG TTGGTTCAGT CGCGTGTGCC CTAGTTTTAA AAATAACAGA 154107 .......... .......... .......... .......... .......... .......... 426 AAGACATACC TGACACGACG GATTCATGCG ACAGTCCGTC GCATGAGTGA CGGTCCATCC 154167 .......... .......... .......... .......... .......... .......... 426 TCGTGTGCGT CAGTGACTGT TGCAGAGTGA TTTTTTGCAG AATTTCCTGG TGATGTACCT 154227 .......... .......... .......... .......... .......... .......... 426 GCAAATTTAA AACCCATGAG TAGAAAATGC TACCATTACT AGAAAGAAAA ACTATAAGTA 154287 .......... .......... .......... .......... .......... .......... 426 TTGGGTTGCC TCCCAACAAG CGCCTAATTT AACGTCGAAG CACGACTGAG GACACTTGAT 154347 .......... .......... .......... .......... .......... .......... 426 TACTCAGAAT TCATCAAGAT GGTATGCCTC GATGACTTCA TTCGCTGATT CAGCATGCCC 154407 .......... .......... .......... .......... .......... .......... 426 GAAATAGATT TTTATGTGTT GTCCATTCAC CTTGAACCGC ACACCCTCCT TAGTTTCCAA 154467 .......... .......... .......... .......... .......... .......... 426 CTCAATTGCT CCATGAGGGA ATAGTTGGGT AACCATGTAA GGACTAGTCC ATTTGGACTT 154527 .......... .......... .......... .......... .......... .......... 426 GAGCTTGCCC GGAAACAAGC GCAACCTAGA ATTGAATAAA AGCACCAAAT CCCCGACCAT 154587 .......... .......... .......... .......... .......... .......... 426 AAACTCTCGT TTTCCAATTT TTTGGTCATG GTACTTCTTC ATCTTTTCTT TGTATAGGGC 154647 .......... .......... .......... .......... .......... .......... 426 TAAGCTTTCA GGCGAAATTC ATCGAGCTCA TTCAACCCAG TTAACCGTTG TTCTGCAGCT 154707 .......... .......... .......... .......... .......... .......... 426 TCGCTCCAAT CCATTTCAAC TTCTTCATAG CCCGCATGGT TTTATGCTCT AACTTAATCG 154767 .......... .......... .......... .......... .......... .......... 426 GAAGATGAAA AGCTTTCCCA TATACAAGTT GGTATAGGGA CATTCTTTAA CGTTGTCCGG 154827 .......... .......... .......... .......... .......... .......... 426 TAGGCCCAAA GAGCATCATC AAGTCTCCTT GACCAATCCG TTCTACTAGC GTTCACCGTT 154887 .......... .......... .......... .......... .......... .......... 426 TTTTATAATA TCTGTTTGAT CTCCCGATTC GACACTTCAA CTTGCCACTA GTTTGAGGGT 154947 .......... .......... .......... .......... .......... .......... 426 GGTAGGCAGT GGCCACATTA TGGCGAACCC CATATTTCTC CAATAACCCC TTGAACAATC 155007 .......... .......... .......... .......... .......... .......... 426 TGTTGCAGAA GTGGGAGCCC CCCATCACTA ATAATTACCC TTGGGGTGCC AAAACGAGAG 155067 .......... .......... .......... .......... .......... .......... 426 AATATATTCT TTTTTTAGAA TGCAGTGACA CTCTTCCCTT CATTGTTTGC AAGGGCGATG 155127 ||| || .......... .......... .......... .......... .......... ...TGCGGTG 433 GTTTCGACCC ATTTAGATAC ATAATCAACC GCTACTAGAA TGTACTTCAT TCCATGAGAA 155187 .......... .......... .......... .......... .......... .......... 433 CTCACAAAAG GGCCCATAAA GTCAATACCC CAAACATTAA ATAACTCAAT CACAAGAATG 155247 .......... .......... .......... .......... .......... .......... 433 AGGTTTAGAG GGAGCTCTTG CTTTCTTAAA ATGCCGCCAT CTCGTGGGCA TCGATCACAT 155307 .......... .......... .......... .......... .......... .......... 433 GCTTTAGCAA ACTCATGAGC ATCTTGATGA AGAGTTAGCC AATGTAACCA CATTGTAATA 155367 .......... .......... .......... .......... .......... .......... 433 TCTTATGAGC GGTTCGGATA CCGCTATGAT GTCCACAAAC GGGTGAGGAA TGGCATGCTT 155427 .......... .......... .......... .......... .......... .......... 433 CTAACACACT CAACATCTCA CATTCTGGCA CAAAACACCG AATAAGCCCG TCGGCACAAC 155487 .......... .......... .......... .......... .......... .......... 433 TCTTATATAA GTATGGTTCA TCCCAAAAGA ACATCTTCAC ATCGTACATG AACTTTTCTT 155547 .......... .......... .......... .......... .......... .......... 433 TTGATGAAAG GACAAGTTCG ATGGAACAAT ATCACTAGCC AGATAGTTCG CAAAATCTGC 155607 .......... .......... .......... .......... .......... .......... 433 GAACCATGGA GTCAAGTCTT ATGAAGCAGC CAATACATGC TCATCGGGGA AAGTATCATC 155667 .......... .......... .......... .......... .......... .......... 433 AATGTCAGTC TTATCCCCTA ACTCTCTCAT AGCTTCATCC TCTAGATGGG ACAAATGATC 155727 .......... .......... .......... .......... .......... .......... 433 AACAACCTGA TTTTCAGTTC CTTTTCAATC CATCACTTCA AAGTCAAATT CTTGTAGCAG 155787 .......... .......... .......... .......... .......... .......... 433 TAATACCTAA CAAATCAACC TAGGTTTCGC ATCCTTCTTT GCTATCAAAT ATCTCAACGC 155847 .......... .......... .......... .......... .......... .......... 433 TGAGTGGTCA GTATGAACTA TAACTCTAGT ACCTAGAAAA TAGGAGAGAA ATTTTTCAAA 155907 .......... .......... .......... .......... .......... .......... 433 AGGAAAGACT ACTGCAAGGA GTTCTTGCTC AGTCACTGTG TAGTTCTTCT GAGCTTCATT 155967 .......... .......... .......... .......... .......... .......... 433 TAGGGCTTTA CTAGCATGGT AAATGGGGTG AAGGATTTTG TTCTTTCTTT ATCCCAATAC 156027 .......... .......... .......... .......... .......... .......... 433 TACACCAAGA ACAACCCCAC TAGCATCACA CATCACCTTA AATGGACTGT TTTAATCCGG 156087 .......... .......... .......... .......... .......... .......... 433 AGAAATAATG ATAGGTGCAG ACACCATTTT TTCTTTTAGC TCGCCGAATG CTTTAAGACA 156147 .......... .......... .......... .......... .......... .......... 433 GGATTCATCA AAACAAAATT TACAATCTTT TTCCAGCACT TTGCACAATG GATGTGCAAT 156207 .......... .......... .......... .......... .......... .......... 433 ATTTGAAAAG TCTTTGATGA ATCTCCGGTA AAAACCTGCA TGCCCAAGAA AGCTTCTCAC 156267 .......... .......... .......... .......... .......... .......... 433 ACCTTTCACA GAGATCGGTG GGGGAAGTCT CTCTATTACC TCGACTTTAG CTCGATCAAC 156327 .......... .......... .......... .......... .......... .......... 433 CTCTATGCCC TTTTCTAAAC TGTCATGACC CAAAACAATA CCTTCTTTCA CCATGAAATG 156387 .......... .......... .......... .......... .......... .......... 433 ACATTTTTTC CAATTTAGTA CTAAATTGCA GTCTTCACTT CTCTTAAGGA CCTCAGATAA 156447 .......... .......... .......... .......... .......... .......... 433 ATTGTTCAAA CACCGCTCGA ATGAATCACA AACCACAGAA AAATCATCCA TAAAAACTTC 156507 .......... .......... .......... .......... .......... .......... 433 TATAGTTTCT TCCACCATGT CGGAAAATAT CAACATCATA CATCTCTGAA ATGTGGCGGG 156567 .......... .......... .......... .......... .......... .......... 433 TGCATTGCAC AACCCAAACG ACATTCTTTT GAATGCAAAG GTCTCATATG GACAAGTAAA 156627 .......... .......... .......... .......... .......... .......... 433 AGTGGTTTTC TCTTGATCTT CTGGTGCAAT AGAAATCTGA TTATACCCCG AATATCTATC 156687 .......... .......... .......... .......... .......... .......... 433 AAGAAAACAG TACCACCCTT TTCCGGGCAA GTCTATCCAA CATCTGATCC ATGAAGGGCA 156747 .......... .......... .......... .......... .......... .......... 433 TAGGAAAGTG GTCTTTTTCA GTCCATGCAT TTAATTTGCG GTAATCCATA AACACCCTCC 156807 .......... .......... .......... .......... .......... .......... 433 ATCCAGTAAC CAGTCTCATT CGAACAAGTT CATTTTTTTC ATTGGGGACC ACAGTCATTC 156867 .......... .......... .......... .......... .......... .......... 433 CCCTTTCTTA GGTACACACT GAACAGGGCA TACCCATCTA CTATCGGCGA TCGGATAGAT 156927 .......... .......... .......... .......... .......... .......... 433 TACTCCGGCA TCCAACCACT TAATGATTTC CTTCTTCATG ACCTCTTGCA TAGGTGGATT 156987 .......... .......... .......... .......... .......... .......... 433 TAAGCGTCTC TGGTGCTTAA TACTTGGCTT ATGATCAGGC ATGAGTTGGA TTTTATGAGA 157047 .......... .......... .......... .......... .......... .......... 433 GCAAATACCA GGAGGGATCC CAATAATGTC CGCAATAGTC TACCTAATAG CTCTTTTGAA 157107 .......... .......... .......... .......... .......... .......... 433 CCTTTTTAGC ACTTTCACCA AACTCTCTAT TTGTTGTTCA TTCAGGTCTG ATGCAATGAT 157167 | |||||| || .......... .......... .......... .......... .....-AATA ATGCAA-CAT 446 TACTGACAAA GTGTCACCAT TTCCTAAGAA TTCGTACTTG AGATGAGGTG GGAGAGCTTT 157227 | || | | | | T-CTCATACA -T........ .......... .......... .......... .......... 456 TAGTTCTAAC TTTGGAGCCT CTTGTATAGA TGGTTTCGCG GGTGGGAACT CGCGATTCTT 157287 .......... .......... .......... .......... .......... .......... 456 CATATCTAAC TCATATTTCT TCGGTTTAAA CCGAACATCA CCTCGATCAA GAGCCGCGAC 157347 .......... .......... .......... .......... .......... .......... 456 TAATGACTCA TACTCTTCAA TGCAATCGCT ATCAAAATTC ATTATCACTG CCGCTAATGC 157407 .......... .......... .......... .......... .......... .......... 456 TTCTACACCT AGACGTTCTT CTATTTGTGT CTCAGATGTC TCACCAATGT TGTAGGATAT 157467 .......... .......... .......... .......... .......... .......... 456 AGAAGATACC GATTGGAGCT CACCACTCTG CCTCATGGAC CTACAAATGT TAAAGGTCAC 157527 .......... .......... .......... .......... .......... .......... 456 TTCCTCATTT TTCAACCGAA ATTTCATCTG CCCCTTTTCC ATATCTACTA AGGCTCTTCC 157587 .......... .......... .......... .......... .......... .......... 456 CGTGGCAAGG AATAGCCTCC CAAGAATAAT GGGAACTTCA AAATCGACTT CACAATCAAG 157647 .......... .......... .......... .......... .......... .......... 456 AATAACAAAA TCTACCGGAA ATATGAATGA CTCCACTTTT ACCAGCACAT CGTGGAGTAT 157707 .......... .......... .......... .......... .......... .......... 456 CCCTATAGGC CTTTTTACCG TTCGATCATC CATCAGTAGC CGCATCGCAG TAAGCTTTGG 157767 .......... .......... .......... .......... .......... .......... 456 ATGACCCAAA CCCAACTTCT TGTAAATCGA GAGGGGCATG AGATTTGTTC TTGCCCCTAG 157827 .......... .......... .......... .......... .......... .......... 456 ATCACATAAT GCTTTCGCAA AATGTAATAG CCCAATTGTA CAAGGAATAG TGAACGCACC 157887 .......... .......... .......... .......... .......... .......... 456 CGGATCTTCT TTCTTTTGTA CCAGAGATCT TGTAGCAATA GCGCTACAAT GCTGCATTCT 157947 |||| | | || .......... .......... ....AGATGT TTTA...... .......... .......... 466 ATCATCATCT TCAAAAGTGA TCGATCTTTT CTTTGTAACC AGATCTTTCA TAAACTTGGC 158007 .......... .......... .......... .......... .......... .......... 466 GTACCTAGGC ATTTGTTCTA AAGGTTCTAC CAAAGGGACA TTGATAGAAA GTTGCTTCAA 158067 .......... .......... .......... .......... .......... .......... 466 CATTGTTAGA AAACGCTGAT ATTTACCATC CTCAATCTTT TTCACTAATC TTTGAGGAAA 158127 .......... .......... .......... .......... .......... .......... 466 TGGGGGTGGT GTCCTAGGCA TGGGAGTTAC CTTTTTAGGA ACTTCAACAT CTTTTACAGT 158187 .......... .......... .......... .......... .......... .......... 466 GTTATCCTCT ACTTCACCAT TAACATCTAC CACTTTATCA GTATCTTTTG TCACCTTTTT 158247 .......... .......... .......... .......... .......... .......... 466 CTCATTAGAC GGCATAGGTG GGTCAATGGT TTGCTTACCA CCACGAGTAG TGATTTCCGT 158307 .......... .......... .......... .......... .......... .......... 466 ACAATGTCCA TCATCTTTAG GATTTTGGAC AGTGTTGCTA GGAAGAGTGC CCGGTTGCCG 158367 .......... .......... .......... .......... .......... .......... 466 TGTGTTCACA GTCGCAGATA ATTAAGCCAA TTTTTACTCA AATTTCTTAA TCGAAATTGC 158427 .......... .......... .......... .......... .......... .......... 466 ATGTGTATCG CCTTTTTGAC CAATACCCGC TAAATCATTC CTCAACTCTT TATTGTGCTC 158487 .......... .......... .......... .......... .......... .......... 466 ATCACTAGCA TCGAACCTCC TCATCATTTT ATGCAACATA TCCTCAATTC GCGCCATACT 158547 .......... .......... .......... .......... .......... .......... 466 ACCTTCACCA TCCCCAGAAG TAACTTCACG ATTTTGAGGA GGAACATAGG GCCCATTTCT 158607 .......... .......... .......... .......... .......... .......... 466 ATTACCATAG TTACCCCTGT TGAAGTTGTT GTCGCGGTTA GAGTTTCCAT CTCGGACATA 158667 .......... .......... .......... .......... .......... .......... 466 ATGACCCTCA GAGTTATAGT TACGATAGAT CCGACCTTGG TTCCCTTGAC CTTGGCGCCA 158727 .......... .......... .......... .......... .......... .......... 466 ATTCTTTTGA TTTGAGCCTT GGGCACTTGG TCGAAAACCC CCCGTCTACT CGTTTACCGC 158787 .......... .......... .......... .......... .......... .......... 466 ATAGGAATCC TCCGCATAAT AGCATTCATC ATTTGGTGGT GGTGATTTAG ACAAGTAGTT 158847 .......... .......... .......... .......... .......... .......... 466 AACTGCATTT ATGTTTTCTG CACCCCCAGT GATATGTTTT AATACCAACC CAAGCTCAGT 158907 .......... .......... .......... .......... .......... .......... 466 TCTCATCTGA GCCATTTCTT CACGAATCGG AAGTGTGGCT GGGTTGTGAA TGGACTACAC 158967 .......... .......... .......... .......... .......... .......... 466 TGCGAAGGTA TTTCTCCCGG AATCTGACTT CCTAGTACTC CAAGCTTTAT TATTCTGAGA 159027 .......... .......... .......... .......... .......... .......... 466 GATTTTCTCT AATTTTTCAG CAATCTCAGC ATAAAGACAC TCCCCATAAG ATCCACCTGC 159087 .......... .......... .......... .......... .......... .......... 466 TATAGTGTCC AACACCGCTT TATTATTATC ATCTTGTCCC TGATAGAAGT ATTCCTTCAG 159147 .......... .......... .......... .......... .......... .......... 466 TGACTCATCA TCTATACGGT GATTTGAGAT GCTTCTTAAA AACGAGGTGA ATCTATCACA 159207 .......... .......... .......... .......... .......... .......... 466 AGAATTTACT AAGTGACTCT CCTGGTAGTG CCACAAAGTT GTTCACTCTA TCTTTGTGGT 159267 .......... .......... .......... .......... .......... .......... 466 TTAGTTTCTT GGAGACCGGG TAGTAGCGTG CTAAGAAAAC GTCTCTTAGT TTGTTCCAAG 159327 .......... .......... .......... .......... .......... .......... 466 TGAAAATTTG AGTTGTAAGG GAGCTCAGTT AACCATATAG AAGCCTCTCT CGTTAGTGAA 159387 .......... .......... .......... .......... .......... .......... 466 AGAGGAAGCA CTCTTAGCCT TGTTACATCC AAGTCCAAGT CAGGCCTCCC TACACAGCTT 159447 .......... .......... .......... .......... .......... .......... 466 TTACACACTG TCCTAACCTT AGCTATATGG GCATGTGGAT CCTCAGAAGG TAGCCCTGAA 159507 .......... .......... .......... .......... .......... .......... 466 AAATAACCTC TGGCAGTGAG CATTTGCATC AGGCTAGTAG TTACCACAAA GGTGTGTCCT 159567 .......... .......... .......... .......... .......... .......... 466 GGTGGTAGAG GGGTCAAGAC AAGTGGCCCA TCGGAGTCTG CTATATTGTC ATAGCCTCTG 159627 .......... .......... .......... .......... .......... .......... 466 CAGTATTGTT AGGGCCGTTG AGCGGGATTT TGTCCCCTCT GTTGGTGTTC ACCCGAAGCA 159687 .......... .......... .......... .......... .......... .......... 466 TCGGGTAACA ACTGACCATG AACATCAACC GGAGCTGGGA TGTTCTGGTT TGGATCATCA 159747 .......... .......... .......... .......... .......... .......... 466 TCATTAATTC CCAAGTTTCG ATTTATGTTG CATAGTGTAC GCTCTAATTC GTGATCGTAG 159807 .......... .......... .......... .......... .......... .......... 466 GGAGACAAGG GTTCTCTTCC TCTTCGTGTA TTGGGCACAC ATGGAAGATG GTTCTGCAAG 159867 || .......... .......... .......... .......... .......... .....TAAAT 471 AATCAAAAAC AATAAAACAA AGTAAAATCA AGAAAATATC AACTAAACTA TAGAATTAAG 159927 || ||| ||| || || | || | AAGCAATAAC AA-AAGAGAA A......... .......... .......... .......... 491 TTTAAGTTAA TCTAAAAGCT ATTTTCCCTG ACAACGGTGC CAAAATTTGA TACGCTCAAA 159987 .......... .......... .......... .......... .......... .......... 491 CTTACTTCTC AAATAAGAAG TAAAGCGGCC GTGTCAAGTA AATAACCCAA CTAATGAGGT 160047 ||||||| | |||| ||||| |||||||||| |||||| ||| .......... .......... TAAAGCGATC GTGTAAAGTA AATAACCCAA CTAATGTGGT 531 TGGGATCGTT CCCACGAGGA AAATAGTTTA GAC-TAACTT CAGTCTATTA TTACTACTGT 160106 ||| |||||| ||||| |||| |||||||||| ||| |||||| || ||||||| ||| | ||| TGGAATCGTT CCCACAAGGA AAATAGTTTA GACTTAACTT CAATCTATTA TTATTGTTGT 591 TCAGTCAATT GCTTTCTTGG AAAGCAAAAA TGATAAAAAG GGGGGTTTTC TATTTCTAAA 160166 |||||||| | || ||||| ||| |||||| |||| ||||| |||||||||| | |||||||| TCAGTCAAAT ATTTCCTTGG AAAACAAAAA TGAT-AAAAG GGGGGTTTTC TGTTTCTAAA 650 TGAAAGAAAA TAACTAGCGA AATTAAAGGA GACAACTAAC AGCTTCAAAT GTTGGAGTTT 160226 | || | ||| |||||||||| |||||||||| | ||||||| |||||||||| | |||||||| TAAATGTAAA TAACTAGCGA AATTAAAGGA GGAAACTAAC AGCTTCAAAT GGTGGAGTTT 710 AATCAATTCA T 160237 |||||||| | | AATCAATTAA T 721 hqPGS_C10HBa0115K16.1+_SGN-E577830- (159863 159888,160008 160237) ******************************************************************************** EST sequence 30 -strand 574 n (File: SGN-E550629-) 1 GGAACGAAGA CCCTCGACGG ACCGTTGTGC CTACGACGGT CCGTCATACA TGCCGTCGAG 61 GGTAATGAAG AGAGCAGCAA AAGAAATTGC ATAAGTATGG GACAACGGAG TCCATGACGG 121 TCTGTCGTGA CCACGACGAT CCGTCGTGAG GTCCGTCGAC CCAGCCGCGT TTTGGCAGAT 181 TTCCAGCAAA TATAGTCCTT GTTTAATTAG GTTTTTATTT TCTATAAATA GTTCTAAAAA 241 CATCATTTTT GAGGTAAGAC TCTGGATCAT TGTTAGACTC CGTATTGTTA GACATCGTAT 301 AAGAAAACAT TTTATTGTTA GACTTTTGAT TATCATTAAT TGTTGGTGAT TTTTTGTGAT 361 AAATCAAGAA AACTCTCAGA TTTTACTCTT TCTCTTTGAA TTAAGTACAT GAATTCTTAT 421 ATGATATATT TGAATATTGT GATTATGACT ATGGTTAACT AAACTCCATA ACTAGGATTG 481 TGGGAACCAT AGGAGAATAT TGAGGTAAAA CCTAACTAAA ATAACAATTC TAGAATAGTG 541 TCTTGCATGT ATTAATAATT CTTTGGCTCA AAAG Predicted gene structure (within gDNA segment 162779 to 159710): Exon 1 161233 160899 ( 335 n); cDNA 1 334 ( 334 n); score: 0.810 Intron 1 160898 160847 ( 52 n); Pd: 0.000 (s: 0.62), Pa: 0.000 (s: 0.86) Exon 2 160846 160607 ( 240 n); cDNA 335 574 ( 240 n); score: 0.892 MATCH C10HBa0115K16.1- SGN-E550629- 0.844 575 1.002 C PGS_C10HBa0115K16.1-_SGN-E550629- (161233 160899,160846 160607) Alignment (genomic DNA sequence = upper lines): GGAGCGGAGA CCCTTGACGG ACCGTTGTTC CTGTGACGAT CCATCATACC TGCCGTCGAG 161174 ||| || ||| |||| ||||| |||||||| | || |||| | || |||||| |||||||||| GGAACGAAGA CCCTCGACGG ACCGTTGTGC CTACGACGGT CCGTCATACA TGCCGTCGAG 60 GGTAATGAAG AGAGCAACAC AATAAATTGC ACAAGTTTGG GACGACGGAG TCCATGACGG 161114 |||||||||| |||||| || || ||||||| | |||| ||| ||| |||||| |||||||||| GGTAATGAAG AGAGCAGCAA AAGAAATTGC ATAAGTATGG GACAACGGAG TCCATGACGG 120 TCCATCGTGA CCACGACGAT CCGTCGCGAG GTCCGTCGAT CCAACCACAT TTTGACAGAT 161054 || |||||| |||||||||| |||||| ||| ||||||||| ||| || | | |||| ||||| TCTGTCGTGA CCACGACGAT CCGTCGTGAG GTCCGTCGAC CCAGCCGCGT TTTGGCAGAT 180 TTCCAGCAAA TAGAGTCCTA ATTTAATTAG GTTTTAATTT TTTATAAATA GTTTGAAAAA 160994 |||||||||| || |||||| ||||||||| ||||| |||| | |||||||| ||| ||||| TTCCAGCAAA TATAGTCCTT GTTTAATTAG GTTTTTATTT TCTATAAATA GTTCTAAAAA 240 CCTCATTTTT GAGGTTAGAC CCTTGATTGT TTTTAGACT- C-T-TTGTTA GACTCTTGAT 160937 | |||||||| ||||| |||| || ||| | | ||||||| | | |||||| ||| | | | CATCATTTTT GAGGTAAGAC TCTGGATCAT TGTTAGACTC CGTATTGTTA GAC-ATCG-T 298 TTTTGAGCTT CTTTTGTGGA TTAGACTTGA GGATTATTGT TACACTTATG GAGAATCTTT 160877 | || |||| | | |||||||| |||||| ATAAGAAAAC ATTTTATTG- TTAGACTT-T TGATTATC.. .......... .......... 334 GTTCTTCAAT TAATTTCAGT AATTGATGTA ATTGATTGTT GGTGATTTTT GGTGATTAAT 160817 ||| |||||| |||||||||| ||||| ||| .......... .......... .......... ATTAATTGTT GGTGATTTTT TGTGATAAAT 364 CAAGTGAACT TTCGGATTTT ACTCTTTCTC ATTGAAGTAA GTGCATGAAT TCTTATATCA 160757 |||| |||| || |||||| |||||||||| ||||| ||| || ||||||| |||||||| | CAAGAAAACT CTCAGATTTT ACTCTTTCTC TTTGAATTAA GTACATGAAT TCTTATATGA 424 TATATTTGAA TATTGTGATT ATGACTATGG GCAACTAAAC TCCATAACTA GGGTTGTGGG 160697 |||||||||| |||||||||| |||||||||| |||||||| |||||||||| || ||||||| TATATTTGAA TATTGTGATT ATGACTATGG TTAACTAAAC TCCATAACTA GGATTGTGGG 484 AACCATAGCC GAATAATTGT GTAAAACCTA ACTAAAATAA CAATTCTAGA ATAGTGTTAT 160637 |||||||| ||||| | |||||||||| |||||||||| |||||||||| ||||||| | AACCATAGGA GAATATTGAG GTAAAACCTA ACTAAAATAA CAATTCTAGA ATAGTGTCTT 544 GCATGTATTG ATAATTCTTT CGCTTAGAAG 160607 ||||||||| |||||||||| ||| | ||| GCATGTATTA ATAATTCTTT GGCTCAAAAG 574 hqPGS_C10HBa0115K16.1-_SGN-E550629- (161233 160899,160846 160607) ******************************************************************************** EST sequence 31 -strand 574 n (File: SGN-E550645-) 1 GGAACGAAGA CCCTCGTCGG ACCGTTGTGC CTACGACGGT CCGTCATACA TGCCGTCGAG 61 GGTAATGAAG AGAGCAGCAA AAGAAATTGC ATAAGTATGG GACAACGGAG TCCATGACGG 121 TCTGTCGTGA CCACGACGAT CCGTCGTGAG GTCCGTCGAC CCAGCCGCGT TTTGGCAGAT 181 TTCCAGCAAA TATAGTCCTT GTTTAATTAG GTTTTTATTT TCTATAAATA GTTCTAAAAA 241 CATCATTTTT GAGGTAAGAC TCTGGATCAT TGTTAGACTC CGTATTGTTA GACATCGTAT 301 AAGAAAACAT TTTATTGTTA GACTTTTGAT TATCATTAAT TGTTGGTGAT TTTTTGTGAT 361 AAATCAAGAA AACTCTCAGA TTTTACTCTT TCTCTTTGAA TTAAGTACAT GAATTCTTAT 421 ATGATATATT TGAATATTGT GATTATGACT ATGGTTAACT AAACTCCATA ACTAGGATTG 481 TGGGAACCAT AGGAGAATAT TGAGGTAAAA CCTAACTAAA ATAACAATTC TAGAATAGTG 541 TCTTGCATGT ATTAATAATT CTTTGGCTCA AAAG Predicted gene structure (within gDNA segment 162779 to 159710): Exon 1 161233 160899 ( 335 n); cDNA 1 334 ( 334 n); score: 0.807 Intron 1 160898 160847 ( 52 n); Pd: 0.000 (s: 0.62), Pa: 0.000 (s: 0.86) Exon 2 160846 160607 ( 240 n); cDNA 335 574 ( 240 n); score: 0.892 MATCH C10HBa0115K16.1- SGN-E550645- 0.843 575 1.002 C PGS_C10HBa0115K16.1-_SGN-E550645- (161233 160899,160846 160607) Alignment (genomic DNA sequence = upper lines): GGAGCGGAGA CCCTTGACGG ACCGTTGTTC CTGTGACGAT CCATCATACC TGCCGTCGAG 161174 ||| || ||| |||| | ||| |||||||| | || |||| | || |||||| |||||||||| GGAACGAAGA CCCTCGTCGG ACCGTTGTGC CTACGACGGT CCGTCATACA TGCCGTCGAG 60 GGTAATGAAG AGAGCAACAC AATAAATTGC ACAAGTTTGG GACGACGGAG TCCATGACGG 161114 |||||||||| |||||| || || ||||||| | |||| ||| ||| |||||| |||||||||| GGTAATGAAG AGAGCAGCAA AAGAAATTGC ATAAGTATGG GACAACGGAG TCCATGACGG 120 TCCATCGTGA CCACGACGAT CCGTCGCGAG GTCCGTCGAT CCAACCACAT TTTGACAGAT 161054 || |||||| |||||||||| |||||| ||| ||||||||| ||| || | | |||| ||||| TCTGTCGTGA CCACGACGAT CCGTCGTGAG GTCCGTCGAC CCAGCCGCGT TTTGGCAGAT 180 TTCCAGCAAA TAGAGTCCTA ATTTAATTAG GTTTTAATTT TTTATAAATA GTTTGAAAAA 160994 |||||||||| || |||||| ||||||||| ||||| |||| | |||||||| ||| ||||| TTCCAGCAAA TATAGTCCTT GTTTAATTAG GTTTTTATTT TCTATAAATA GTTCTAAAAA 240 CCTCATTTTT GAGGTTAGAC CCTTGATTGT TTTTAGACT- C-T-TTGTTA GACTCTTGAT 160937 | |||||||| ||||| |||| || ||| | | ||||||| | | |||||| ||| | | | CATCATTTTT GAGGTAAGAC TCTGGATCAT TGTTAGACTC CGTATTGTTA GAC-ATCG-T 298 TTTTGAGCTT CTTTTGTGGA TTAGACTTGA GGATTATTGT TACACTTATG GAGAATCTTT 160877 | || |||| | | |||||||| |||||| ATAAGAAAAC ATTTTATTG- TTAGACTT-T TGATTATC.. .......... .......... 334 GTTCTTCAAT TAATTTCAGT AATTGATGTA ATTGATTGTT GGTGATTTTT GGTGATTAAT 160817 ||| |||||| |||||||||| ||||| ||| .......... .......... .......... ATTAATTGTT GGTGATTTTT TGTGATAAAT 364 CAAGTGAACT TTCGGATTTT ACTCTTTCTC ATTGAAGTAA GTGCATGAAT TCTTATATCA 160757 |||| |||| || |||||| |||||||||| ||||| ||| || ||||||| |||||||| | CAAGAAAACT CTCAGATTTT ACTCTTTCTC TTTGAATTAA GTACATGAAT TCTTATATGA 424 TATATTTGAA TATTGTGATT ATGACTATGG GCAACTAAAC TCCATAACTA GGGTTGTGGG 160697 |||||||||| |||||||||| |||||||||| |||||||| |||||||||| || ||||||| TATATTTGAA TATTGTGATT ATGACTATGG TTAACTAAAC TCCATAACTA GGATTGTGGG 484 AACCATAGCC GAATAATTGT GTAAAACCTA ACTAAAATAA CAATTCTAGA ATAGTGTTAT 160637 |||||||| ||||| | |||||||||| |||||||||| |||||||||| ||||||| | AACCATAGGA GAATATTGAG GTAAAACCTA ACTAAAATAA CAATTCTAGA ATAGTGTCTT 544 GCATGTATTG ATAATTCTTT CGCTTAGAAG 160607 ||||||||| |||||||||| ||| | ||| GCATGTATTA ATAATTCTTT GGCTCAAAAG 574 hqPGS_C10HBa0115K16.1-_SGN-E550645- (161233 160899,160846 160607) ******************************************************************************** EST sequence 76 -strand 385 n (File: SGN-E273427-) 1 AATATAGTCC TTGTTTAATT AGGTTTTTAT TTTCTATAAA TAGTTCTAAA AACATCATTT 61 TTGAGGTAAG ACTCTGGATC ATTGTTAGAC TCCGTATTGT TAGACATCGT ATAAGAAAAC 121 ATTTTATTGT TAGACTTTTG ATTATCATTA ATTGTTGGTG ATTTTTTGTG ATAAATCAAG 181 AAAACTCTCA GATTTTACTC TTTCTCTTTG AATTAAGTAC ATGAATTCTT ATATGATATA 241 TTTGAATATT GTGATTATGA CTATGGTTAA CTAAACTCCA TAACTAGGAT TGTGGGAACC 301 ATAGGAGAAT ATTGAGGTAA AACCTAACTA AAATAACAAT TCTAGAATAG TGTCTTGCAT 361 GTATTAATAA TTCTTTGGCT CAAAA Predicted gene structure (within gDNA segment 163717 to 159720): Exon 1 161045 160899 ( 147 n); cDNA 1 146 ( 146 n); score: 0.724 Intron 1 160898 160847 ( 52 n); Pd: 0.000 (s: 0.62), Pa: 0.000 (s: 0.86) Exon 2 160846 160608 ( 239 n); cDNA 147 385 ( 239 n); score: 0.891 MATCH C10HBa0115K16.1- SGN-E273427- 0.828 386 1.003 C PGS_C10HBa0115K16.1-_SGN-E273427- (161045 160899,160846 160608) Alignment (genomic DNA sequence = upper lines): AATAGAGTCC TAATTTAATT AGGTTTTAAT TTTTTATAAA TAGTTTGAAA AACCTCATTT 160986 |||| ||||| | ||||||| ||||||| || ||| |||||| ||||| ||| ||| |||||| AATATAGTCC TTGTTTAATT AGGTTTTTAT TTTCTATAAA TAGTTCTAAA AACATCATTT 60 TTGAGGTTAG ACCCTTGATT GTTTTTAGAC T-C-T-TTGT TAGACTCTTG ATTTTTGAGC 160929 ||||||| || || || ||| || |||||| | | | |||| ||||| | | | | || TTGAGGTAAG ACTCTGGATC ATTGTTAGAC TCCGTATTGT TAGAC-ATCG -TATAAGAAA 118 TTCTTTTGTG GATTAGACTT GAGGATTATT GTTACACTTA TGGAGAATCT TTGTTCTTCA 160869 |||| | | |||||||| |||||| ACATTTTATT G-TTAGACTT -TTGATTATC .......... .......... .......... 146 ATTAATTTCA GTAATTGATG TAATTGATTG TTGGTGATTT TTGGTGATTA ATCAAGTGAA 160809 ||| |||| |||||||||| || ||||| | |||||| || .......... .......... ..ATTAATTG TTGGTGATTT TTTGTGATAA ATCAAGAAAA 184 CTTTCGGATT TTACTCTTTC TCATTGAAGT AAGTGCATGA ATTCTTATAT CATATATTTG 160749 || || |||| |||||||||| || ||||| | |||| ||||| |||||||||| ||||||||| CTCTCAGATT TTACTCTTTC TCTTTGAATT AAGTACATGA ATTCTTATAT GATATATTTG 244 AATATTGTGA TTATGACTAT GGGCAACTAA ACTCCATAAC TAGGGTTGTG GGAACCATAG 160689 |||||||||| |||||||||| || |||||| |||||||||| |||| ||||| |||||||||| AATATTGTGA TTATGACTAT GGTTAACTAA ACTCCATAAC TAGGATTGTG GGAACCATAG 304 CCGAATAATT GTGTAAAACC TAACTAAAAT AACAATTCTA GAATAGTGTT ATGCATGTAT 160629 ||||| | |||||||| |||||||||| |||||||||| ||||||||| ||||||||| GAGAATATTG AGGTAAAACC TAACTAAAAT AACAATTCTA GAATAGTGTC TTGCATGTAT 364 TGATAATTCT TTCGCTTAGA A 160608 | |||||||| || ||| | | | TAATAATTCT TTGGCTCAAA A 385 hqPGS_C10HBa0115K16.1-_SGN-E273427- (161045 160899,160846 160608) ******************************************************************************** EST sequence 96 -strand 783 n (File: SGN-E546250-) 1 GACAAAACAA CCAAAAGCAG CAGCAACGAC AGCCGATGAG GAGAGCAACA CAAGCTCCAA 61 CAACCAAGCA TCTCTAGGCG AGACTCTGAA CAAGTGAGCT CCGGTGAAAC TTTTGAAATT 121 TTGAGTTTGT CAAAGACAGA TCTGTAACAG ACCCGTCCAG GAAATTTGTC TAAAGATGAA 181 CGCGGAAGTT TTTGAGCAAA AACTGCAGAA AAGTACCACC TACGGAGCTT GTAACGGTCC 241 GTCGTGCCTG TAACGGTCCA TAGGTGGCAT CGTAGTGAAG CTGCTGAAGG AAGATGGGGA 301 AGTCTGACCA AGTGTGGGTT ACGGAGTGCG TGACGGACCG TCGTAACCAT GACGGTCCGT 361 CCTGCTGGTT CGTCGTGAAG ATCAGAGAAG TAGTCAGAGA AATTATGCAT GTGACAATCC 421 GTCATACCTG CCGCCGAGCG TAATGAAGAC AGCAGCAGAA GAATTCGCCA AGTATGGGAC 481 GACGGAGTCC ATGATGACCC GTCGTGACCA CGACGACCCG TCCCGAGGTC CGTCGACCAA 541 ATCGCGTTTC GACAGATTTT CAACAAATAG AGTCCTTCTT TGATTAGATT TTTATTTTTT 601 AAAAAAATAG TTCAAAAAAC CTCATTTTTG GGGTTAGACT CTTAGTTATT AGACACTTTT 661 ATGTTATATT CTTTGTGAGG AGATTATTTT TATTATTACA CTTTTCTCTG GAGTTGATTG 721 TTGGTGATTT TGTCGATTAA TCAAGTAAAT TTCTGAATTT TATTTTTTCT CAAAAAAAAA 781 AAA Predicted gene structure (within gDNA segment 163868 to 156787): Exon 1 163122 163097 ( 26 n); cDNA 137 161 ( 25 n); score: 0.577 Intron 1 163096 161503 (1594 n); Pd: 0.900 (s: 0), Pa: 0.000 (s: 0.76) Exon 2 161502 161260 ( 243 n); cDNA 162 402 ( 241 n); score: 0.868 Intron 2 161259 161210 ( 50 n); Pd: 0.000 (s: 0.86), Pa: 0.000 (s: 0.84) Exon 3 161209 160922 ( 288 n); cDNA 403 690 ( 288 n); score: 0.776 Intron 3 160921 160870 ( 52 n); Pd: 0.000 (s: 0.58), Pa: 0.000 (s: 0.72) Exon 4 160869 160781 ( 89 n); cDNA 691 777 ( 87 n); score: 0.730 MATCH C10HBa0115K16.1- SGN-E546250- 0.806 646 0.825 C PGS_C10HBa0115K16.1-_SGN-E546250- (163122 163097,161502 161260,161209 160922,160869 160781) Alignment (genomic DNA sequence = upper lines): CAAACCTAGA AATGTACGAA TCGAGGATAT CTTTATGATA AGAAAAAGTA TTTCACCAAA 163063 || | || | || || || ||| CAGATCT-GT AACAGACCCG TCCAGG.... .......... .......... .......... 161 GTCAATACCC TTCTTTTGAC CAAATCCCTC AACAACCAAT CTAAATTTGT ACCTGGGCTT 163003 .......... .......... .......... .......... .......... .......... 161 CAAGTTGTGT TCTTTAACTT TAACTTTGAA CATCCACTTG TTCTTCAAAT CTTTCATTCC 162943 .......... .......... .......... .......... .......... .......... 161 CTTGGGCAAT TTTACCAACT CATAAGTGTG GTCCTCATGT ATAGACTTCA TGTCATCTTC 162883 .......... .......... .......... .......... .......... .......... 161 CGTGAATTCA ATCCCTTGAT CCTTGTTCTT ATCTTTTGGA CTACTCATAA CATTCATGTT 162823 .......... .......... .......... .......... .......... .......... 161 CTTCACAGTC ACTGAGTAAC ACATACTCAT TGGGTGAATA ATGATGGGAA GGAACCCGTT 162763 .......... .......... .......... .......... .......... .......... 161 GTCTTGTGGG CCTCCTGATT GGAATATTTA ATTCATGCAC AACTTCACGA GCAAGAGGGT 162703 .......... .......... .......... .......... .......... .......... 161 CCTCAATAAC AATATCACTG TTTATTATCA ACATTAACAT GTTGATTTGA TACATGATTC 162643 .......... .......... .......... .......... .......... .......... 161 TGGGCATCAC CATTATTATC AATCCCAACA ACATCATGCA CACTTGTGTG AGGAACTTCA 162583 .......... .......... .......... .......... .......... .......... 161 TCATGATGAA CTATACTATT AAAACTTGAA GATTCTAGCT TCTCTGTTTT TTCAATATCT 162523 .......... .......... .......... .......... .......... .......... 161 TCAATTGTTT GATTCTCCAT AAAAATAATA TCACGACTTC TCACGAGTTT CTTCTCAATT 162463 .......... .......... .......... .......... .......... .......... 161 GGATCATATA GCCTATAACT AAACTCATCA AGTCCATATC CAATGAAGAG GCATTGCATT 162403 .......... .......... .......... .......... .......... .......... 161 TTCTTGGCAT CTAACTTTAA CCTCTCATCT TTCGGCACAT GTACAAAAGT TTTGCAACTA 162343 .......... .......... .......... .......... .......... .......... 161 AATACTCTCA AATGGTCGTA GGAAACATCC TTCTGGTACC AAACACTATT TGGTACATCA 162283 .......... .......... .......... .......... .......... .......... 161 CTTTGCAAAG AAACATTAGG AGATAAATTA ATCACATGTG CAGAAGTCAA TAAAGCCTCA 162223 .......... .......... .......... .......... .......... .......... 161 TCTCAAAATG ACTTCGATAA CTTTACTTAA CAAAACAAAC GTCTAACTCT TTCCATCAAG 162163 .......... .......... .......... .......... .......... .......... 161 GTCCTATTCA TCCTCTCAGC CAAACCATTA AGTCGAGGAG TCTTACAAGG AGTTTTCTGG 162103 .......... .......... .......... .......... .......... .......... 161 TGTCTAATAC TATAATACAT CAAAAATATA ATAACCTATG ATAGAGCCTA ACGTGAAGCC 162043 .......... .......... .......... .......... .......... .......... 161 TAGTAGCCCA ATGAAGTTTA ATCGTGAGCT TTTGAATAAA TTTATGGAGA CATTAGAATT 161983 .......... .......... .......... .......... .......... .......... 161 AAACTAGGAT CAAAAGAAAA AGGCAAGAAC CTAAGATTAA GTCTGGGATC TAGCTCTTGT 161923 .......... .......... .......... .......... .......... .......... 161 GAATAAAGTA AAGGTAAACC ATAGATACCC CCAAGACCAT TCGGTGACGG GAAGTAGCTT 161863 .......... .......... .......... .......... .......... .......... 161 CGCCCATGAC CCTTGGTGAT GTGCCAAAAG GCTCTTCTCG CCTAGTCGAC AACATCTTCA 161803 .......... .......... .......... .......... .......... .......... 161 CTAGCCCTAG ATACTGTAGT AAAGGGTGAA GTGGGTTGAG TGTCATCCAA TGGGTTGGAA 161743 .......... .......... .......... .......... .......... .......... 161 ATTCACCCAC TTCCCCTCTC ATCGCCTAGT GATATGCCCC ATTTAGGGAG CTACTATTAA 161683 .......... .......... .......... .......... .......... .......... 161 ATTGGGTGAA ATAAGAAGAG TTAGGCGAGT CATCTAAGTG ATTTGGAGAG TCAAGGGGTG 161623 .......... .......... .......... .......... .......... .......... 161 TCAAAGGGCG GTCTTGATAT ACCGTGGTTT CACGGTATTT TTAATGCTTT TTCCTTAAGT 161563 .......... .......... .......... .......... .......... .......... 161 TTAGTGGGTC CAAAAGCCTT TTTGTACTAA TTTTTATGTA AGTTTCTCTT TATTTGCAAG 161503 .......... .......... .......... .......... .......... .......... 161 AAATCTATCT AAAAGATGAA TACGGAGGTT TTTGAGTGAG AAATATAGAA AAGTACCACC 161443 |||| | ||| || ||||||| |||| ||| |||||| | || | |||| |||||||||| AAATTTGTCT AA-AGATGAA CGCGGAAGTT TTTGAGCAAA AACTGCAGAA AAGTACCACC 220 TACGGAGCTT GTGACGGTTC GTCATGCCCG TGACGGTCCG TAGGTGGCAT CGTAGTGCAG 161383 |||||||||| || ||||| | ||| |||| | | ||||||| |||||||||| ||||||| || TACGGAGCTT GTAACGGTCC GTCGTGCCTG TAACGGTCCA TAGGTGGCAT CGTAGTGAAG 280 CTGCTGAAGG AAGATGGGGA AGTCTGACAA AGTGTGGGGT TACGGAGTGC GTGACATACC 161323 |||||||||| |||||||||| |||||||| | ||||| |||| |||||||||| ||||| ||| CTGCTGAAGG AAGATGGGGA AGTCTGACCA AGTGT-GGGT TACGGAGTGC GTGACGGACC 339 GTCATAGCCA TGACGGTCCG TCCTGCTAGT TTGTCATGAA GATCAGAGAA GTAGTCGTAG 161263 ||| || ||| |||||||||| ||||||| || | ||| |||| |||||||||| |||||| || GTCGTAACCA TGACGGTCCG TCCTGCTGGT TCGTCGTGAA GATCAGAGAA GTAGTCAGAG 399 TACCCAAATT CCAAGAGTTC AAGTGTTTTG GAGCGGAGAC CCTTGACGGA CCGTTGTTCC 161203 | || | | AAA....... .......... .......... .......... .......... ...TTATGCA 409 TGTGACGATC CATCATACCT GCCGTCGAGG GTAATGAAGA GAGCAACACA ATAAATTGCA 161143 |||||| ||| | |||||||| |||| |||| |||||||||| |||| || | | || | || TGTGACAATC CGTCATACCT GCCGCCGAGC GTAATGAAGA CAGCAGCAGA AGAATTCGC- 468 CAAGTTTGGG ACGACGGAGT CCATGACGGT CCATCGTGAC CACGACGATC CGTCGCGAGG 161083 ||||| |||| |||||||||| |||||| | || ||||||| |||||||| | |||| ||||| CAAGTATGGG ACGACGGAGT CCATGATGAC CCGTCGTGAC CACGACGACC CGTCCCGAGG 528 TCCGTCGATC CAACCACATT TTGACAGATT TCCAGCAAAT AGAGTCCTAA TTTAATTAGG 161023 |||||||| | || | | || | |||||||| | || ||||| |||||||| ||| ||||| TCCGTCGACC AAATCGCGTT TCGACAGATT TTCAACAAAT AGAGTCCTTC TTTGATTAGA 588 TTTTAATTTT TT--ATAAAT AGTTTGAAAA ACCTCATTTT TGAGGTTAGA CCCTTGATTG 160965 |||| ||||| || | |||| |||| |||| |||||||||| || ||||||| | ||| | | TTTTTATTTT TTAAAAAAAT AGTTCAAAAA ACCTCATTTT TGGGGTTAGA CTCTT-AGTT 647 TTTTTAGACT CTT-TGTTAG ACTCTTGATT TTTGAGCTTC TTTTGTGGAT TAGACTTGAG 160906 || | ||| || ||||| | |||| | ||| || |||| ATTAGACACT TTTATGTTAT ATTCTT-TGT GAGGAGATTA TTTT...... .......... 690 GATTATTGTT ACACTTATGG AGAATCTTTG TTCTTCAATT AATTTCAGTA ATTGATGTAA 160846 ||| ||| || | | || | .......... .......... .......... ......TATT -ATTACACTT TTCTCTGGAG 713 TTGATTGTTG GTGATTTTTG GTGATTAATC AAGTGAACTT TCGGATTTTA CTCTTTCTCA 160786 |||||||||| |||| ||||| |||||||| |||| || || | |||||| | ||||||| TTGATTGTTG GTGA-TTTTG TCGATTAATC AAGTAAATTT CTGAATTTTA TTTTTTCTCA 772 TTGAA 160781 || AAAAA 777 hqPGS_C10HBa0115K16.1-_SGN-E546250- (161502 161260,161209 160922,160869 160781) ******************************************************************************** EST sequence 139 +strand 528 n (File: SGN-E306489+) 1 CGTGACGGTC TGCAGGTGGC ATCGTAGTGT AGCTGCTAAA GGAAGATGGG GAAGTCTGAT 61 CAAGTGTGGG GTTACGGAGT GCGTGACGGA CCGTCGTAGC CATGACGGTC TCTCCTGCTG 121 GTTCGTTATG AAGATCAAGA AGTAGTCCAA GTATCAAAAT TCCAAGAGTT CAAGTGTTAT 181 GGAACGGAGA CCCCCGACGG ACCGTTGTGC CTGTGACGAT CCGTCATACC AGCCGTTGAG 241 GGTAATGAAG AGAGAAACAG AAGAAATTGC ATAAGTATGG GATGACGGAG TCCATGACGA 301 CCTGTCGTGA CCACGACGAT CCATCGCGAG GTCCGTCGAC CCAGCCGCTT TTTGACATAT 361 TCCAGCAAAT AGAGTCCTTA TTTAATTAGT TTTTTTTTAT AAACAGTTCG AAAAACCTCA 421 TTTTTGGGTT AGACTCTTGA TTATGTTAGC TTCTTTTGTG GATTTGACTT TGTGATTATT 481 ATTACACTTT TGGAGAATCT TTAGTCTTCA ATTAATTTTA GTAATTGA Predicted gene structure (within gDNA segment 162131 to 158575): Exon 1 161414 160981 ( 434 n); cDNA 1 428 ( 428 n); score: 0.880 Intron 1 160980 160950 ( 31 n); Pd: 0.000 (s: 0.86), Pa: 0.000 (s: 0.83) Exon 2 160949 160851 ( 99 n); cDNA 429 528 ( 100 n); score: 0.864 MATCH C10HBa0115K16.1- SGN-E306489+ 0.877 533 1.009 C PGS_C10HBa0115K16.1-_SGN-E306489+ (161414 160981,160949 160851) Alignment (genomic DNA sequence = upper lines): CGTGACGGTC CGTAGGTGGC ATCGTAGTGC AGCTGCTGAA GGAAGATGGG GAAGTCTGAC 161355 |||||||||| | ||||||| ||||||||| ||||||| || |||||||||| ||||||||| CGTGACGGTC TGCAGGTGGC ATCGTAGTGT AGCTGCTAAA GGAAGATGGG GAAGTCTGAT 60 AAAGTGTGGG GTTACGGAGT GCGTGACATA CCGTCATAGC CATGACGGTC CGTCCTGCTA 161295 ||||||||| |||||||||| ||||||| | ||||| |||| |||||||||| ||||||| CAAGTGTGGG GTTACGGAGT GCGTGACGGA CCGTCGTAGC CATGACGGTC TCTCCTGCTG 120 GTTTGTCATG AAGATCAGAG AAGTAGTCGT AGTACCCAAA TTCCAAGAGT TCAAGTGTTT 161235 ||| || ||| ||||||| || |||||||| |||| | ||| |||||||||| ||||||||| GTTCGTTATG AAGATCA-AG AAGTAGTCCA AGTATCAAAA TTCCAAGAGT TCAAGTGTTA 179 TGGAGCGGAG ACCCTTGACG GACCGTTGTT CCTGTGACGA TCCATCATAC CTGCCGTCGA 161175 |||| ||||| |||| |||| ||||||||| |||||||||| ||| |||||| | ||||| || TGGAACGGAG ACCCCCGACG GACCGTTGTG CCTGTGACGA TCCGTCATAC CAGCCGTTGA 239 GGGTAATGAA GAGAGCAACA CAATAAATTG CACAAGTTTG GGACGACGGA GTCCATGACG 161115 |||||||||| ||||| |||| || |||||| || |||| || ||| |||||| |||||||||| GGGTAATGAA GAGAGAAACA GAAGAAATTG CATAAGTATG GGATGACGGA GTCCATGACG 299 GTCCATCGTG ACCACGACGA TCCGTCGCGA GGTCCGTCGA TCCAACCACA TTTTGACAGA 161055 | ||||| |||||||||| ||| |||||| |||||||||| ||| || | |||||||| | ACCTGTCGTG ACCACGACGA TCCATCGCGA GGTCCGTCGA CCCAGCCGCT TTTTGACATA 359 TTTCCAGCAA ATAGAGTCCT AATTTAATTA GGTTTTAATT TTTTATAAAT AGTTTGAAAA 160995 ||||||||| |||||||||| ||||||||| | ||| || ||||||||| |||| ||||| -TTCCAGCAA ATAGAGTCCT TATTTAATTA -G-TTT--TT TTTTATAAAC AGTTCGAAAA 414 ACCTCATTTT TGAGGTTAGA CCCTTGATTG TTTTTAGACT CTTTGTTAGA CTCTTGATT- 160936 |||||||||| || | ||||| ||||||||| ACCTCATTTT TGGG...... .......... .......... .....TTAGA CTCTTGATTA 443 TTTGAGCTTC TTTTGTGGAT TAGACTTGAG GATTATTGTT ACACTTATGG AGAATCTTTG 160876 | | |||||| |||||||||| | ||||| ||||||| || |||||| ||| ||||||||| TGTTAGCTTC TTTTGTGGAT TTGACTTTGT GATTATTATT ACACTTTTGG AGAATCTTTA 503 TTCTTCAATT AATTTCAGTA ATTGA 160851 ||||||||| ||||| |||| ||||| GTCTTCAATT AATTTTAGTA ATTGA 528 hqPGS_C10HBa0115K16.1-_SGN-E306489+ (161414 160981,160949 160851) ******************************************************************************** EST sequence 264 +strand 787 n (File: SGN-E369291+) 1 TATGGACGTA TGGTGCAAGG TTTATCTCAC GAAAAAGATA TACTGGTGGT CATGTTCTCA 61 ATGTTTTCGA CGCCAAGCAT CTCCATTCAG TAGTAAGCGA TTTACTTTTT AAGGAAATCT 121 GTCCAAAGAT GAATGCGGAG ATTTTGAGTG AAGAAATGCA GAATAGACGA CCTACAGAGC 181 TTATGACGGT CCGTCGTGCT TGTGACGGTC TGTAGGTGGC AGCGTAGTGC AGCTGCTGAA 241 AGAAGATGGG GAAGTCTGAC CAAGTGCGGG GCTACGGAGT TCATGACGGT CCGTCCTGCA 301 GGTTCGTCAT GAAGTTCAGA GAAGTAGTCC CAGTACCCAT ATTCCAAGAG TTCAAGTGTG 361 TTGAAACGAA GACCCTCGAT AGACCGTTGT GCCTATGACG GTCCGTCATA CCTGCCGTCG 421 AGGGTAATGA AGAGAGAAGC AAAAGAAATT GCATAAGTAT GGGACGACAG AGTCCATGAC 481 GGTCCATCGT GACCATGACG ATCCGTCGTG AGTTCTGTCG ACCCAGCCGC GTTTTGGCAG 541 ATTTCCAGCA AATAGAGTCC TTGTTTAGTT AGGTTTTTAT TTTCTATAAA TAGTTCGAAA 601 AACCTCGTTT TTGAGGTTAT ACTCCGTATT GTTAGACATC ATATTAGTAG ACACTGTATT 661 GTTAGACTTT TGAGAATCAT TACACTTTTT GTGAGATTGT TGATTACTTT AAGATTCTTT 721 GCAGTGATTA TTGGTGATTA ATCAACCAAA CTTTTTGAAT TTTAAAAAAA AAAAAAAAAA 781 AAAAAAA Predicted gene structure (within gDNA segment 163868 to 157040): Exon 1 161502 160939 ( 564 n); cDNA 115 656 ( 542 n); score: 0.816 Intron 1 160938 160903 ( 36 n); Pd: 0.000 (s: 0.64), Pa: 0.000 (s: 0) Exon 2 160902 160877 ( 26 n); cDNA 657 681 ( 25 n); score: 0.846 PPA cDNA 764 787 MATCH C10HBa0115K16.1- SGN-E369291+ 0.816 590 0.750 C PGS_C10HBa0115K16.1-_SGN-E369291+ (161502 160939,160902 160877) Alignment (genomic DNA sequence = upper lines): AAATCTATCT AAAAGATGAA TACGGAGGTT TTTGAGTG-A GAAATATAGA AAAGTACCAC 161444 |||||| || || ||||||| | ||||| || ||||||| | ||||| ||| | || || || AAATCTGTCC AA-AGATGAA TGCGGAGATT -TTGAGTGAA GAAATGCAGA ATAG-ACGAC 171 CTACGGAGCT TGTGACGGTT CGTCATGCCC GTGACGGTCC GTAGGTGGCA TCGTAGTGCA 161384 |||| ||||| | ||||||| |||| ||| ||||||||| |||||||||| ||||||||| CTACAGAGCT TATGACGGTC CGTCGTGCTT GTGACGGTCT GTAGGTGGCA GCGTAGTGCA 231 GCTGCTGAAG GAAGATGGGG AAGTCTGACA AAGTGTGGGG TTACGGAGTG CGTGACATAC 161324 ||||||||| |||||||||| ||||||||| ||||| |||| |||||| | | GCTGCTGAAA GAAGATGGGG AAGTCTGACC AAGTGCGGGG CTACGGA--- ---G---T-- 280 CGTCATAGCC ATGACGGTCC GTCCTGCTAG TTTGTCATGA AGATCAGAGA AGTAGTCGTA 161264 |||| | | |||||| ||||||| | || ||||||| || ||||||| ||||||| | --TCAT-G-- A---CGGTCC GTCCTGCAGG TTCGTCATGA AGTTCAGAGA AGTAGTCCCA 332 GTACCCAAAT TCCAAGAGTT CAAGTGTTTT GGAGCGGAGA CCCTTGACGG ACCGTTGTTC 161204 ||||||| || |||||||||| ||||||| || | | || ||| |||| || | |||||||| | GTACCCATAT TCCAAGAGTT CAAGTGTGTT GAAACGAAGA CCCTCGATAG ACCGTTGTGC 392 CTGTGACGAT CCATCATACC TGCCGTCGAG GGTAATGAAG AGAGCAACAC AATAAATTGC 161144 || ||||| | || ||||||| |||||||||| |||||||||| |||| | || || ||||||| CTATGACGGT CCGTCATACC TGCCGTCGAG GGTAATGAAG AGAGAAGCAA AAGAAATTGC 452 ACAAGTTTGG GACGACGGAG TCCATGACGG TCCATCGTGA CCACGACGAT CCGTCGCGAG 161084 | |||| ||| |||||| ||| |||||||||| |||||||||| ||| |||||| |||||| ||| ATAAGTATGG GACGACAGAG TCCATGACGG TCCATCGTGA CCATGACGAT CCGTCGTGAG 512 GTCCGTCGAT CCAACCACAT TTTGACAGAT TTCCAGCAAA TAGAGTCCTA ATTTAATTAG 161024 || ||||| ||| || | | |||| ||||| |||||||||| ||||||||| |||| |||| TTCTGTCGAC CCAGCCGCGT TTTGGCAGAT TTCCAGCAAA TAGAGTCCTT GTTTAGTTAG 572 GTTTTAATTT TTTATAAATA GTTTGAAAAA CCTCATTTTT GAGGTTAGAC CCTTGATTGT 160964 ||||| |||| | |||||||| ||| |||||| |||| ||||| ||||||| || | ||||| GTTTTTATTT TCTATAAATA GTTCGAAAAA CCTCGTTTTT GAGGTTATAC TCCGTATTGT 632 TTTTAGACTC TTTGTTAGAC TCTTGATTTT TGAGCTTCTT TTGTGGATTA GACTTGAGGA 160904 | | || ||||| | || TAGACATCAT ATTAGTAGAC AC-TG..... .......... .......... .......... 656 TTATTGTTAC ACTTATGGAG AATCTTT 160877 |||||||| |||| | ||| |||| || .TATTGTTAG ACTT-TTGAG AATCATT 681 hqPGS_C10HBa0115K16.1-_SGN-E369291+ (161502 160939,160902 160877) ******************************************************************************** EST sequence 98 -strand 737 n (File: SGN-E369290-) 1 GTCATGTTCT CAATGTTTTC GACGCCAAGC ATCTCCATTC AGTAGTAAGC GATTTACTTT 61 TTAAGGAAAT CTGTCCAAAG ATGAATGCGG AGATTTTGAG TGAAGAAATG CAGAATAGAC 121 GACCTACAGA GCTTATGACG GTCCGTCGTG CTTGTGACGG TCTGTAGGTG GCAGCGTAGT 181 GCAGCTGCTG AAAGAAGATG GGGAAGTCTG ACCAAGTGCG GGGCTACGGA GTTCATGACG 241 GTCCGTCCTG CAGGTTCGTC ATGAAGTTCA GAGAAGTAGT CCCAGTACCC ATATTCCAAG 301 AGTTCAAGTG TGTTGAAACG AAGACCCTCG ATAGACCGTT GTGCCTATGA CGGTCCGTCA 361 TACCTGCCGT CGAGGGTAAT GAAGAGAGAA GCAAAAGAAA TTGCATAAGT ATGGGACGAC 421 AGAGTCCATG ACGGTCCATC GTGACCATGA CGATCCGTCG TGAGTTCTGT CGACCCAGCC 481 GCGTTTTGGC AGATTTCCAG CAAATAGAGT CCTTGTTTAG TTAGGTTTTT ATTTTCTATA 541 AATAGTTCGA AAAACCTCGT TTTTGAGGTT ATACTCCGTA TTGTTAGACA TCATATTAGT 601 AGACACTGTA TTGTTAGACT TTTGAGAATC ATTACACTTT TTGTGAGATT GTTGATTACT 661 TTAAGATTCT TGCAAGTGAT TATTGGTGAT TAATCAAGCA AACTTTTGGA TTTTAAAAAA 721 AAAAAAAAAA AAAAAAA Predicted gene structure (within gDNA segment 163742 to 157070): Exon 1 161502 160939 ( 564 n); cDNA 67 608 ( 542 n); score: 0.816 Intron 1 160938 160903 ( 36 n); Pd: 0.000 (s: 0.64), Pa: 0.000 (s: 0) Exon 2 160902 160877 ( 26 n); cDNA 609 633 ( 25 n); score: 0.846 PPA cDNA 715 737 MATCH C10HBa0115K16.1- SGN-E369290- 0.816 590 0.801 C PGS_C10HBa0115K16.1-_SGN-E369290- (161502 160939,160902 160877) Alignment (genomic DNA sequence = upper lines): AAATCTATCT AAAAGATGAA TACGGAGGTT TTTGAGTGA- GAAATATAGA AAAGTACCAC 161444 |||||| || ||||||||| | ||||| || | ||||||| ||||| ||| | || || || AAATCTGTC- CAAAGATGAA TGCGGAGATT T-TGAGTGAA GAAATGCAGA ATAG-ACGAC 123 CTACGGAGCT TGTGACGGTT CGTCATGCCC GTGACGGTCC GTAGGTGGCA TCGTAGTGCA 161384 |||| ||||| | ||||||| |||| ||| ||||||||| |||||||||| ||||||||| CTACAGAGCT TATGACGGTC CGTCGTGCTT GTGACGGTCT GTAGGTGGCA GCGTAGTGCA 183 GCTGCTGAAG GAAGATGGGG AAGTCTGACA AAGTGTGGGG TTACGGAGTG CGTGACATAC 161324 ||||||||| |||||||||| ||||||||| ||||| |||| |||||||| | ||| GCTGCTGAAA GAAGATGGGG AAGTCTGACC AAGTGCGGGG CTACGGAGT- --T--CAT-- 236 CGTCATAGCC ATGACGGTCC GTCCTGCTAG TTTGTCATGA AGATCAGAGA AGTAGTCGTA 161264 | | | ||||| ||||||| | || ||||||| || ||||||| ||||||| | -G----A--C -----GGTCC GTCCTGCAGG TTCGTCATGA AGTTCAGAGA AGTAGTCCCA 284 GTACCCAAAT TCCAAGAGTT CAAGTGTTTT GGAGCGGAGA CCCTTGACGG ACCGTTGTTC 161204 ||||||| || |||||||||| ||||||| || | | || ||| |||| || | |||||||| | GTACCCATAT TCCAAGAGTT CAAGTGTGTT GAAACGAAGA CCCTCGATAG ACCGTTGTGC 344 CTGTGACGAT CCATCATACC TGCCGTCGAG GGTAATGAAG AGAGCAACAC AATAAATTGC 161144 || ||||| | || ||||||| |||||||||| |||||||||| |||| | || || ||||||| CTATGACGGT CCGTCATACC TGCCGTCGAG GGTAATGAAG AGAGAAGCAA AAGAAATTGC 404 ACAAGTTTGG GACGACGGAG TCCATGACGG TCCATCGTGA CCACGACGAT CCGTCGCGAG 161084 | |||| ||| |||||| ||| |||||||||| |||||||||| ||| |||||| |||||| ||| ATAAGTATGG GACGACAGAG TCCATGACGG TCCATCGTGA CCATGACGAT CCGTCGTGAG 464 GTCCGTCGAT CCAACCACAT TTTGACAGAT TTCCAGCAAA TAGAGTCCTA ATTTAATTAG 161024 || ||||| ||| || | | |||| ||||| |||||||||| ||||||||| |||| |||| TTCTGTCGAC CCAGCCGCGT TTTGGCAGAT TTCCAGCAAA TAGAGTCCTT GTTTAGTTAG 524 GTTTTAATTT TTTATAAATA GTTTGAAAAA CCTCATTTTT GAGGTTAGAC CCTTGATTGT 160964 ||||| |||| | |||||||| ||| |||||| |||| ||||| ||||||| || | ||||| GTTTTTATTT TCTATAAATA GTTCGAAAAA CCTCGTTTTT GAGGTTATAC TCCGTATTGT 584 TTTTAGACTC TTTGTTAGAC TCTTGATTTT TGAGCTTCTT TTGTGGATTA GACTTGAGGA 160904 | | || ||||| | || TAGACATCAT ATTAGTAGAC AC-TG..... .......... .......... .......... 608 TTATTGTTAC ACTTATGGAG AATCTTT 160877 |||||||| |||| | ||| |||| || .TATTGTTAG ACTT-TTGAG AATCATT 633 hqPGS_C10HBa0115K16.1-_SGN-E369290- (161502 160939,160902 160877) ******************************************************************************** EST sequence 40 -strand 695 n (File: SGN-E241731-) 1 ATTCTATTAT TAGATATATA TGAATATTGT GATTATGACT ATGGGTAACT AAGCTACATA 61 ACTATGGTTG TGGGAACCAT GGGTGAATAA TGAGGTAAAA TCTAACTAAA ATAACAATTC 121 TAGAATAGTG TCTTGCATGT ATTGATAATT GTTTTGCTTA GAAGTCTTTT TAACGGATGG 181 TCAACATTAG AACTCGCCTT AGTGCTACTT GCCGGACCAA GAAGGTAGAT AATAGCAAAA 241 GAATTATTAA CATAAATTTA GTGTATACTT TTTGATAGGC TAGTATTGAT TGGTACGAGG 301 TAATAACTTA GTCAAATATC GAATACAATG CTTAATATGA GGTAATGGTA AGGGTTTATA 361 TAGCAACACA CGTAGACGGA CCAAGGTGCG TAGTGATATT TTCTAGATGC AAGACCAAGG 421 ATATAGAAAT ACATAACTTA TTACTTTGTA TGCAAGATAC TAGGAAAGAA TTGTTATAGT 481 TAGAATTATT AAATTAGGAA CTTGTGGAGA ACACTTAAAC CCTAGTTAAT TATATTATTT 541 GATTAAATTC CAACATTTGA ATTTGTTAGT TGCCTACTTA AATTTAGCTA GCTATTTCCA 601 TTCATTTAGA ACTAAAACCC CCCTTTTTAT TGTCTTTGTT TTCTAAAGAA ATAATTGACT 661 AACTAATAGT AATAACAAAT TGAAAATAAC TCTGA Predicted gene structure (within gDNA segment 162289 to 157469): Exon 1 160764 160077 ( 688 n); cDNA 7 693 ( 687 n); score: 0.857 MATCH C10HBa0115K16.1- SGN-E241731- 0.857 688 0.990 C PGS_C10HBa0115K16.1-_SGN-E241731- (160764 160077) Alignment (genomic DNA sequence = upper lines): TTATATCATA TATTTGAATA TTGTGATTAT GACTATGGGC AACTAAACTC CATAACTAGG 160705 |||| ||| ||| |||||| |||||||||| ||||||||| |||||| || |||||||| | TTATTAGATA TATATGAATA TTGTGATTAT GACTATGGGT AACTAAGCTA CATAACTATG 66 GTTGTGGGAA CCATAGCCGA ATAATTGTGT AAAACCTAAC TAAAATAACA ATTCTAGAAT 160645 |||||||||| |||| | || ||||| || |||| ||||| |||||||||| |||||||||| GTTGTGGGAA CCATGGGTGA ATAATGAGGT AAAATCTAAC TAAAATAACA ATTCTAGAAT 126 AGTGTTATGC ATGTATTGAT AATTCTTTCG CTTAGAAGTC TTTTTAACGG ATGGCCAACG 160585 ||||| ||| |||||||||| |||| ||| | |||||||||| |||||||||| |||| |||| AGTGTCTTGC ATGTATTGAT AATTGTTTTG CTTAGAAGTC TTTTTAACGG ATGGTCAACA 186 TTAGAAGTCG CCTTAATGCT ACTTGCCGGA CCAAGGAGGT AGATAATAGG AAAAGAATTA 160525 |||||| ||| ||||| |||| |||||||||| ||||| |||| ||||||||| |||||||||| TTAGAACTCG CCTTAGTGCT ACTTGCCGGA CCAAGAAGGT AGATAATAGC AAAAGAATTA 246 TCAACATAGA TTTAGTGTAT ACTATCTAAA AGGCTAGTTT TTATTGATAT GAGGTAATAA 160465 | |||||| | |||||||||| ||| | | | |||||||| | | |||| || |||||||||| TTAACATAAA TTTAGTGTAT ACTTTTTGAT AGGCTAGTAT TGATTGGTAC GAGGTAATAA 306 CTTAGTCACA TATCGAGTAC GATGCTTAAT ATGAGGTAAA GATAAGGGTT AGTATAGCAA 160405 |||||||| | |||||| ||| ||||||||| ||||||||| | |||||||| |||||||| CTTAGTCAAA TATCGAATAC AATGCTTAAT ATGAGGTAAT GGTAAGGGTT TATATAGCAA 366 CACACGTACC CGGACCAAGG TGCGGAGTGA AATTTTCTAG ATGCCAGACC AAGGATTTAG 160345 |||||||| |||||||||| |||| ||||| ||||||||| |||| ||||| |||||| ||| CACACGTAGA CGGACCAAGG TGCGTAGTGA TATTTTCTAG ATGCAAGACC AAGGATATAG 426 AAATACATAA CTTATCACTT TGCATGCAAG ATACTAGGAA AGAATTATTA TAGTTCGAAT 160285 |||||||||| ||||| |||| || ||||||| |||||||||| |||||| ||| ||||| |||| AAATACATAA CTTATTACTT TGTATGCAAG ATACTAGGAA AGAATTGTTA TAGTTAGAAT 486 TATCAATTTA TGAAACTGTG GGGAACATGT AAACCCTAGT TACTTTTATG AATTGATTAA 160225 ||| || ||| ||| |||| | ||||| | |||||||||| || || ||| | |||||||| TATTAAATTA GGAACTTGTG GAGAACACTT AAACCCTAGT TAATTATATT ATTTGATTAA 546 ACTCCAACAT TTGAAGCTGT TAGTTGTCTC CTTTAATTTC GCTAGTTATT TTCTTTCATT 160165 | |||||||| ||||| ||| |||||| || ||| ||||| ||||| |||| | | |||||| ATTCCAACAT TTGAATTTGT TAGTTGCCTA CTTAAATTTA GCTAGCTATT TCCATTCATT 606 TAGAAATAGA AAACCCCCCT TTTTATCATT TTTGCTTTCC AAGAAAGCAA TTGACTGAAC 160105 ||||| | | |||||||||| |||||| | |||| |||| || || || |||||| | TAGAACT--A AAACCCCCCT TTTTATTGTC TTTGTTTTCT AAAGAAATAA TTGACTAACT 664 AGTAGTAATA ATAGACTG-A AGTTAGTCT 160077 | |||||||| | | | || | | | | ||| AATAGTAATA ACAAATTGAA AATAACTCT 693 hqPGS_C10HBa0115K16.1-_SGN-E241731- (160764 160077) ******************************************************************************** EST sequence 261 +strand 767 n (File: SGN-E546251+) 1 AAGCAGCCGC TACCCCTCCT CTCTCCTTGC TCCGGCAAAA CGCCGCGAAG GCAGAGGTGG 61 CCACCTTCCT CCGTCCCTCT GTTCCTCCCC TCTCTTCTCT TCGCCTTCGC TCCCTCTCAT 121 TTTTTCTCTT CTCCTCCGGT AGAGGAGCAA CAGTGCAGGA ACCAGCAGGC GCTGGCTGCC 181 TCTGCTCTTA TTCTGTGGAC AGCAGCTCGG TGAAAGCAAC GAGAAGCAGC AACCAGCATC 241 CGGACAGAAA CACCAGTAGC AGTGGTGAGG CAACGTCGCT CAACTCCTCT CCTCTTCTCC 301 TTGTCTCCGA CAAAACAACC AAAAGCAGCA GCAACGACAG CCGATGAGGA GAGCAACACA 361 AGCTCCAACA ACCAAGCATC TCTAGGCGAG ACTCTGAACA AGTGAGCTCC GGTGAAACTT 421 TTGAAATTTT GAGTTTGTCA AAGACAGATC TGTAACAGAC CCGTCCAGGA AATTTGTCTA 481 AAGATGAACG CGGAAGTTTT TGAGCAAAAA CTGCAGAAAA GTACCACCTA CGGAGCTTGT 541 AACGGTCCGT CGTGCCTGTA ACGGTCCATA GGTGGCATCG TAGTGAAGCT GCTGAAGGAA 601 GATGGGGAAG TCTGACCAAG TGTGGGTTAC GGAAGTGCGT GACGGACCGT CGTAACCATG 661 ACGGTCCGTC CTGCTGGTTC GTCGTGAAGA TCAGAGAAGT AGTCAGAGAA ATTATGCATG 721 TGACAATCCG TCATACCTGC CGCCGAGCGT AATGAAGACA GCAGCAG Predicted gene structure (within gDNA segment 163868 to 160027): Exon 1 163122 163097 ( 26 n); cDNA 445 469 ( 25 n); score: 0.577 Intron 1 163096 161503 (1594 n); Pd: 0.900 (s: 0), Pa: 0.000 (s: 0.76) Exon 2 161502 161260 ( 243 n); cDNA 470 711 ( 242 n); score: 0.858 Intron 2 161259 161210 ( 50 n); Pd: 0.000 (s: 0.86), Pa: 0.000 (s: 0.84) Exon 3 161209 161155 ( 55 n); cDNA 712 766 ( 55 n); score: 0.836 MATCH C10HBa0115K16.1- SGN-E546251+ 0.854 324 0.422 C PGS_C10HBa0115K16.1-_SGN-E546251+ (163122 163097,161502 161260,161209 161155) Alignment (genomic DNA sequence = upper lines): CAAACCTAGA AATGTACGAA TCGAGGATAT CTTTATGATA AGAAAAAGTA TTTCACCAAA 163063 || | || | || || || ||| CAGATCT-GT AACAGACCCG TCCAGG.... .......... .......... .......... 469 GTCAATACCC TTCTTTTGAC CAAATCCCTC AACAACCAAT CTAAATTTGT ACCTGGGCTT 163003 .......... .......... .......... .......... .......... .......... 469 CAAGTTGTGT TCTTTAACTT TAACTTTGAA CATCCACTTG TTCTTCAAAT CTTTCATTCC 162943 .......... .......... .......... .......... .......... .......... 469 CTTGGGCAAT TTTACCAACT CATAAGTGTG GTCCTCATGT ATAGACTTCA TGTCATCTTC 162883 .......... .......... .......... .......... .......... .......... 469 CGTGAATTCA ATCCCTTGAT CCTTGTTCTT ATCTTTTGGA CTACTCATAA CATTCATGTT 162823 .......... .......... .......... .......... .......... .......... 469 CTTCACAGTC ACTGAGTAAC ACATACTCAT TGGGTGAATA ATGATGGGAA GGAACCCGTT 162763 .......... .......... .......... .......... .......... .......... 469 GTCTTGTGGG CCTCCTGATT GGAATATTTA ATTCATGCAC AACTTCACGA GCAAGAGGGT 162703 .......... .......... .......... .......... .......... .......... 469 CCTCAATAAC AATATCACTG TTTATTATCA ACATTAACAT GTTGATTTGA TACATGATTC 162643 .......... .......... .......... .......... .......... .......... 469 TGGGCATCAC CATTATTATC AATCCCAACA ACATCATGCA CACTTGTGTG AGGAACTTCA 162583 .......... .......... .......... .......... .......... .......... 469 TCATGATGAA CTATACTATT AAAACTTGAA GATTCTAGCT TCTCTGTTTT TTCAATATCT 162523 .......... .......... .......... .......... .......... .......... 469 TCAATTGTTT GATTCTCCAT AAAAATAATA TCACGACTTC TCACGAGTTT CTTCTCAATT 162463 .......... .......... .......... .......... .......... .......... 469 GGATCATATA GCCTATAACT AAACTCATCA AGTCCATATC CAATGAAGAG GCATTGCATT 162403 .......... .......... .......... .......... .......... .......... 469 TTCTTGGCAT CTAACTTTAA CCTCTCATCT TTCGGCACAT GTACAAAAGT TTTGCAACTA 162343 .......... .......... .......... .......... .......... .......... 469 AATACTCTCA AATGGTCGTA GGAAACATCC TTCTGGTACC AAACACTATT TGGTACATCA 162283 .......... .......... .......... .......... .......... .......... 469 CTTTGCAAAG AAACATTAGG AGATAAATTA ATCACATGTG CAGAAGTCAA TAAAGCCTCA 162223 .......... .......... .......... .......... .......... .......... 469 TCTCAAAATG ACTTCGATAA CTTTACTTAA CAAAACAAAC GTCTAACTCT TTCCATCAAG 162163 .......... .......... .......... .......... .......... .......... 469 GTCCTATTCA TCCTCTCAGC CAAACCATTA AGTCGAGGAG TCTTACAAGG AGTTTTCTGG 162103 .......... .......... .......... .......... .......... .......... 469 TGTCTAATAC TATAATACAT CAAAAATATA ATAACCTATG ATAGAGCCTA ACGTGAAGCC 162043 .......... .......... .......... .......... .......... .......... 469 TAGTAGCCCA ATGAAGTTTA ATCGTGAGCT TTTGAATAAA TTTATGGAGA CATTAGAATT 161983 .......... .......... .......... .......... .......... .......... 469 AAACTAGGAT CAAAAGAAAA AGGCAAGAAC CTAAGATTAA GTCTGGGATC TAGCTCTTGT 161923 .......... .......... .......... .......... .......... .......... 469 GAATAAAGTA AAGGTAAACC ATAGATACCC CCAAGACCAT TCGGTGACGG GAAGTAGCTT 161863 .......... .......... .......... .......... .......... .......... 469 CGCCCATGAC CCTTGGTGAT GTGCCAAAAG GCTCTTCTCG CCTAGTCGAC AACATCTTCA 161803 .......... .......... .......... .......... .......... .......... 469 CTAGCCCTAG ATACTGTAGT AAAGGGTGAA GTGGGTTGAG TGTCATCCAA TGGGTTGGAA 161743 .......... .......... .......... .......... .......... .......... 469 ATTCACCCAC TTCCCCTCTC ATCGCCTAGT GATATGCCCC ATTTAGGGAG CTACTATTAA 161683 .......... .......... .......... .......... .......... .......... 469 ATTGGGTGAA ATAAGAAGAG TTAGGCGAGT CATCTAAGTG ATTTGGAGAG TCAAGGGGTG 161623 .......... .......... .......... .......... .......... .......... 469 TCAAAGGGCG GTCTTGATAT ACCGTGGTTT CACGGTATTT TTAATGCTTT TTCCTTAAGT 161563 .......... .......... .......... .......... .......... .......... 469 TTAGTGGGTC CAAAAGCCTT TTTGTACTAA TTTTTATGTA AGTTTCTCTT TATTTGCAAG 161503 .......... .......... .......... .......... .......... .......... 469 AAATCTATCT AAAAGATGAA TACGGAGGTT TTTGAGTGAG AAATATAGAA AAGTACCACC 161443 |||| | ||| || ||||||| |||| ||| |||||| | || | |||| |||||||||| AAATTTGTCT AA-AGATGAA CGCGGAAGTT TTTGAGCAAA AACTGCAGAA AAGTACCACC 528 TACGGAGCTT GTGACGGTTC GTCATGCCCG TGACGGTCCG TAGGTGGCAT CGTAGTGCAG 161383 |||||||||| || ||||| | ||| |||| | | ||||||| |||||||||| ||||||| || TACGGAGCTT GTAACGGTCC GTCGTGCCTG TAACGGTCCA TAGGTGGCAT CGTAGTGAAG 588 CTGCTGAAGG AAGATGGGGA AGTCTGACAA AGTGTGGGGT TACGG-AGTG CGTGACATAC 161324 |||||||||| |||||||||| |||||||| | ||||| |||| ||||| |||| |||||| || CTGCTGAAGG AAGATGGGGA AGTCTGACCA AGTGT-GGGT TACGGAAGTG CGTGACGGAC 647 CGTCATAGCC ATGACGGTCC GTCCTGCTAG TTTGTCATGA AGATCAGAGA AGTAGTCGTA 161264 |||| || || |||||||||| |||||||| | || ||| ||| |||||||||| ||||||| | CGTCGTAACC ATGACGGTCC GTCCTGCTGG TTCGTCGTGA AGATCAGAGA AGTAGTCAGA 707 GTACCCAAAT TCCAAGAGTT CAAGTGTTTT GGAGCGGAGA CCCTTGACGG ACCGTTGTTC 161204 | | || | | GAAA...... .......... .......... .......... .......... ....TTATGC 717 CTGTGACGAT CCATCATACC TGCCGTCGAG GGTAATGAAG AGAGCAACA 161155 |||||| || || ||||||| ||||| |||| ||||||||| | |||| || ATGTGACAAT CCGTCATACC TGCCGCCGAG CGTAATGAAG ACAGCAGCA 766 hqPGS_C10HBa0115K16.1-_SGN-E546251+ (161502 161260,161209 161155) ******************************************************************************** EST sequence 273 +strand 758 n (File: SGN-E349968+) 1 AGCTTGTGAC GGTCCGTAAG TGGCATCGTA GTGAAGCTGC TGAAGGAAGA TGGGGAAGTC 61 TGACCAAGTG TGGGGTTATG GAGAGTGTGA CGGACCGTCG TAGCCATGGT GGTCTGTCCT 121 GCTAGTTCGT CATGAAGATC AAAGAAGTAG TCCCAATACC CAAATTCCAA GAATTCAAGT 181 GTTATGGAAT GAAGACCCTC GACGGACCGT TGTGCCTGTG ATGATCCGTC ATACCTGCCG 241 TCGTGGATAA TAAAGAGACC AACAGAAGAC TTTGCATAGG TATGGGATGT CGGAGTCCAT 301 TATGGCCCAT CGTGACCATG ACGACCCGTC GCGAGGTCCG TCGACCTAGC CGCATTTTGA 361 CAGATTTCCA GCCAAGAGGG TCCTTCTCTA ATTAGGTTTT TGTTTTTTAT AAATAATTTG 421 AAAAACCTTG TTTTTAGTTT TAGACTCTTT GGTGATTAGA CTCTCTTATA GTTAGACTTT 481 GGTTATTTTA GCTTCTTTTG TGGATTAGAC TTGGTAATTT TTATTACACT CTTGGAGAAT 541 CTTTAGTCTT CAATTAATTT TAGTAATTAA TTTTTGGTGA TTTTGTTGAT TAATCAAGTG 601 AACTTCTTGA TTATTTTCTT TCTTATTGAA GTAAGTGCAT GAATTCTTAT ATTACATATT 661 TGAATATTGT GATTATGACT ATGTGTAACT AAACTCCATA ACTANGGTTG TGGGAACACA 721 GGCGAATAAT GAGGTAAACC CTACTAAAAA ATAATTCT Predicted gene structure (within gDNA segment 162324 to 159557): Exon 1 161417 160650 ( 768 n); cDNA 2 758 ( 757 n); score: 0.835 MATCH C10HBa0115K16.1- SGN-E349968+ 0.835 768 1.013 C PGS_C10HBa0115K16.1-_SGN-E349968+ (161417 160650) Alignment (genomic DNA sequence = upper lines): GCCCGTGACG GTCCGTAGGT GGCATCGTAG TGCAGCTGCT GAAGGAAGAT GGGGAAGTCT 161358 || |||||| ||||||| || |||||||||| || ||||||| |||||||||| |||||||||| GCTTGTGACG GTCCGTAAGT GGCATCGTAG TGAAGCTGCT GAAGGAAGAT GGGGAAGTCT 61 GACAAAGTGT GGGGTTACGG AGTGCGTGAC ATACCGTCAT AGCCATGACG GTCCGTCCTG 161298 ||| |||||| ||||||| || || | ||||| |||||| | ||||||| | ||| |||||| GACCAAGTGT GGGGTTATGG AGAGTGTGAC GGACCGTCGT AGCCATGGTG GTCTGTCCTG 121 CTAGTTTGTC ATGAAGATCA GAGAAGTAGT CGTAGTACCC AAATTCCAAG AGTTCAAGTG 161238 |||||| ||| |||||||||| ||||||||| | | ||||| |||||||||| | |||||||| CTAGTTCGTC ATGAAGATCA AAGAAGTAGT CCCAATACCC AAATTCCAAG AATTCAAGTG 181 TTTTGGAGCG GAGACCCTTG ACGGACCGTT GTTCCTGTGA CGATCCATCA TACCTGCCGT 161178 || |||| | ||||||| | |||||||||| || ||||||| ||||| ||| |||||||||| TTATGGAATG AAGACCCTCG ACGGACCGTT GTGCCTGTGA TGATCCGTCA TACCTGCCGT 241 CGAGGGTAAT GAAGAGAGCA ACACAATAAA TTGCACAAGT TTGGGACGAC GGAGTCCATG 161118 || || |||| |||||| || ||| || | ||||| | || ||||| | | ||||||||| CGTGGATAAT AAAGAGACCA ACAGAAGACT TTGCATAGGT ATGGGATGTC GGAGTCCATT 301 ACGGTCCATC GTGACCACGA CGATCCGTCG CGAGGTCCGT CGATCCAACC ACATTTTGAC 161058 | || ||||| ||||||| || ||| |||||| |||||||||| ||| | | || ||||||||| ATGGCCCATC GTGACCATGA CGACCCGTCG CGAGGTCCGT CGACCTAGCC GCATTTTGAC 361 AGATTTCCAG CAAATAGAGT CCTAATTTAA TTAGGTTTTA ATTTTTTATA AATAGTTTGA 160998 |||||||||| | || || || ||| | ||| ||||||||| ||||||||| |||| ||||| AGATTTCCAG CCAAGAGGGT CCTTCTCTAA TTAGGTTTTT GTTTTTTATA AATAATTTGA 421 AAAACCTCAT TTTTGAGGTT AGACCCTTGA TTGTTTTTAG ACTCTT-T-G TTAGACTCTT 160940 ||||||| | |||| || |||| ||| || || | ||||| | | ||||||| | AAAACCTTGT TTTTAGTTTT AGACTCTTTG GTGATTAGAC TCTCTTATAG TTAGACTTTG 481 GATTTTTGAG CTTCTTTTGT GGATTAGACT TGAGGATTAT TGTTACACTT ATGGAGAATC 160880 | | ||| || |||||||||| |||||||||| || ||| | | ||||||| ||||||||| GTTATTTTAG CTTCTTTTGT GGATTAGACT TGGTAATTTT TATTACACTC TTGGAGAATC 541 TTTGTTCTTC AATTAATTTC AGTAATTGAT GTAATTGATT GTTGGTGATT TTTGGTGATT 160820 ||| ||||| ||||||||| ||| | || ||| | || ||||||| | |||| ||||| TTTAGTCTTC AATTAATTTT AGT-A---AT -TAA-T--TT -TTGGTGA-T TTTGTTGATT 591 AATCAAGTGA ACTTTCGGAT TTTACTCTTT CTCATTGAAG TAAGTGCATG AATTCTTATA 160760 |||||||||| |||| ||| | | ||||| || ||||||| |||||||||| |||||||||| AATCAAGTGA ACTTCTTGAT TATTTTCTTT CTTATTGAAG TAAGTGCATG AATTCTTATA 651 TCATATATTT GAATATTGTG ATTATGACTA TGGGCAACTA AACTCCATAA CTAGGGTTGT 160700 | | |||||| |||||||||| |||||||||| || | ||||| |||||||||| ||| |||||| TTACATATTT GAATATTGTG ATTATGACTA TGTGTAACTA AACTCCATAA CTANGGTTGT 711 GGGAACCATA GCCGAATAAT TGTGTAAAAC CTAACTAAAA TAACAATTCT 160650 ||||| || | | |||||||| ||||| | || ||||||| || |||||| GGGAA-CACA GGCGAATAAT GAGGTAAACC CT-ACTAAAA -AATAATTCT 758 hqPGS_C10HBa0115K16.1-_SGN-E349968+ (161417 160650) ******************************************************************************** EST sequence 101 -strand 750 n (File: SGN-E546519-) 1 CAAGGCAATN ATAGTCAGTT TTCAAGGTCC ACACAACAGT TCCAAGGAAA TCTGTTCAAA 61 GATGTATGCA GAGGTTTTTG AGTGAAGAAA TGCAGAAGAG ACCACCTACG GAGCTTGTGA 121 CGGTCCGTCA TGCTTGTGAC GGTACGTAGG TGGCAGCATA GTGCAGCTGC TGAAGGAATA 181 TGGGGAAGTC TGACCAAGTG TGGGGTTACG GAGTCCATGA CGGTCCTTCG TGTCTATGAC 241 GGTCCGTCCT GCAGGTTCTT CATGAAGTTC AGAGAAGTAA TCCCAGTACC CATATTCCAA 301 GAGTTTAAGT GTTTTGGAAC GAAGACCCTC GACGGACCGT TGTGCCTTTG ACGGTCCGTC 361 ATACTTGCCG TCGAGGGTAA TGAAGAGAGA AGCAGAAGAA ATTTCATCAA GTATGGGACG 421 ACGGAGTCCA TGACGGTCCG TCGTGACCAC GATGATCCGT CGCGAGGTCC GTTGACCCAG 481 CCGCGTTTTG ACAAATTTCC AGCAAATAGA GTCCTTATTT AATTAGGTTT TTAATTTCTA 541 TAAATAGTTC AAAAAAACCT CATTTTTGAG GTTAGACTCT GGATAATTAT TAGACTCTGT 601 GTATTAGTGT TAGACTTTTG ATTATCATTA GACTTTTTGT GAGATTCTTG ATTACTTTGA 661 AATTCTTGCA AGTGATTGTT GGTGATTAAT CAAGAAAACT TTCGGATTTT AAAAAAAAAA 721 AAAAAAAAAC TCGAGACTAG TCTCTCTCTC Predicted gene structure (within gDNA segment 163580 to 157698): Exon 1 161502 160949 ( 554 n); cDNA 48 602 ( 555 n); score: 0.856 Intron 1 160948 160905 ( 44 n); Pd: 0.000 (s: 0.88), Pa: 0.000 (s: 0.58) Exon 2 160904 160796 ( 109 n); cDNA 603 711 ( 109 n); score: 0.674 PPA cDNA 712 730 MATCH C10HBa0115K16.1- SGN-E546519- 0.827 663 0.884 C PGS_C10HBa0115K16.1-_SGN-E546519- (161502 160949,160904 160796) Alignment (genomic DNA sequence = upper lines): AAATCTATCT AAAAGATGAA TACGGAGGTT TTTGAGTG-A GAAATATAGA AAAGTACCAC 161444 |||||| | | ||||||| | | | |||||| |||||||| | ||||| ||| | || ||||| AAATCTGT-T CAAAGATGTA TGCAGAGGTT TTTGAGTGAA GAAATGCAGA AGAG-ACCAC 105 CTACGGAGCT TGTGACGGTT CGTCATGCCC GTGACGGTCC GTAGGTGGCA TCGTAGTGCA 161384 |||||||||| ||||||||| |||||||| |||||||| | |||||||||| | ||||||| CTACGGAGCT TGTGACGGTC CGTCATGCTT GTGACGGTAC GTAGGTGGCA GCATAGTGCA 165 GCTGCTGAAG GAAGATGGGG AAGTCTGACA AAGTGTGGGG TTACGGAGTG CGTGACATAC 161324 |||||||||| ||| |||||| ||||||||| |||||||||| ||||||||| | |||| | GCTGCTGAAG GAATATGGGG AAGTCTGACC AAGTGTGGGG TTACGGAGTC CATGACGGTC 225 CGTCATAGCC ATGACGGTCC GTCCTGCTAG TTTGTCATGA AGATCAGAGA AGTAGTCGTA 161264 | || | | |||||||||| ||||||| | || |||||| || ||||||| |||| || | CTTCGTGTCT ATGACGGTCC GTCCTGCAGG TTCTTCATGA AGTTCAGAGA AGTAATCCCA 285 GTACCCAAAT TCCAAGAGTT CAAGTGTTTT GGAGCGGAGA CCCTTGACGG ACCGTTGTTC 161204 ||||||| || |||||||||| ||||||||| ||| || ||| |||| ||||| |||||||| | GTACCCATAT TCCAAGAGTT TAAGTGTTTT GGAACGAAGA CCCTCGACGG ACCGTTGTGC 345 CTGTGACGAT CCATCATACC TGCCGTCGAG GGTAATGAAG AGAGCAACAC AATAAATTGC 161144 || ||||| | || |||||| |||||||||| |||||||||| |||| | || || ||||| | CTTTGACGGT CCGTCATACT TGCCGTCGAG GGTAATGAAG AGAGAAGCAG AAGAAATTTC 405 A-CAAGTTTG GGACGACGGA GTCCATGACG GTCCATCGTG ACCACGACGA TCCGTCGCGA 161085 | ||||| || |||||||||| |||||||||| |||| ||||| ||||||| || |||||||||| ATCAAGTATG GGACGACGGA GTCCATGACG GTCCGTCGTG ACCACGATGA TCCGTCGCGA 465 GGTCCGTCGA TCCAACCACA TTTTGACAGA TTTCCAGCAA ATAGAGTCCT AATTTAATTA 161025 ||||||| || ||| || | |||||||| | |||||||||| |||||||||| ||||||||| GGTCCGTTGA CCCAGCCGCG TTTTGACAAA TTTCCAGCAA ATAGAGTCCT TATTTAATTA 525 GGTTTTAATT TTTTATAAAT AGTT-TGAAA AACCTCATTT TTGAGGTTAG ACCCTTGATT 160966 |||||| | | || ||||||| |||| ||| |||||||||| |||||||||| || || ||| GGTTTTTAAT TTCTATAAAT AGTTCAAAAA AACCTCATTT TTGAGGTTAG ACTCTGGATA 585 GTTTTTAGAC TCTTTGTTAG ACTCTTGATT TTTGAGCTTC TTTTGTGGAT TAGACTTGAG 160906 || |||||| ||| ||| ATTATTAGAC TCTGTGT... .......... .......... .......... .......... 602 GATTATTGTT ACACTTATGG AGAATCTTTG TTCTTCAATT AATTTCAGTA ATTGATGT-A 160847 |||| |||| | |||| | | | ||| || ||| | | | | ||| | | | .ATTAGTGTT AGACTT-TTG ATTATCATTA GACTTTTTGT GAGATTCTTG ATTACTTTGA 660 ATTGATTGTT GGTGATTTTT GGTGATTAAT CAAGTGAACT TTCGGATTTT A 160796 | | ||| |||||| || |||||||||| |||| |||| |||||||||| | AATTCTTGCA AGTGATTGTT GGTGATTAAT CAAGAAAACT TTCGGATTTT A 711 hqPGS_C10HBa0115K16.1-_SGN-E546519- (161502 160949) ******************************************************************************** EST sequence 117 +strand 731 n (File: SGN-E261921+) 1 TATGGACGTA TGGTGCAAGG TTTATCTCAC GAAAAAGATA TACTGGTGGT CATGTTCTCA 61 ATGTTTTCGA CGCCAAGCAT CTCCATTCAG TAGTAAGCGA TTTACTTTTT AAGGAAATCT 121 GTCCAAAGAT GAATGCGGAG ATTTTGAGTG AAGAAATGCA GAATAGACGA CCTACAGAGC 181 TTATGACGGT CCGTCGTGCT TGTGACGGTC TGTAGGTGGC AGCGTAGTGC AGCTGCTGAA 241 AGAAGATGGG GAAGTCTGAC CAAGTGCGGG GCTACGGAGT TCATGACGGT CCGTCCTGCA 301 GGTTCGTCAT GAAGTTCAGA GAAGTAGTCC CAGTACCCAT ATTCCAAGAG TTCAAGTGTG 361 TTGAAACGAA GACCCTCGAT AGACCGTTGT GCCTATGACG GTCCGTCATA CCTGCCGTCG 421 AGGGTAATGA AGAGAGAAGC AAAAGAAATT GCATAAGTAT GGGACGACAG AGTCCATGAC 481 GGTCCATCGT GACCATGACG ATCCGTCGTG AGTTCTGTCG ACCCAGCCGC GTTTTGGCAG 541 ATTTCCAGCA AATAGAGTCC TTGTTTAGTT AGGTTTTTAT TTTCTATAAA TAGTTCGAAA 601 AACCTCGTTT TTGAGGTTAT ACTCCGTATT GTTAGACATC ATATTAGTAG ACACTGTATT 661 GTTAGACTTT TGAGAATCAT TACACTTTTT GTGAGATTGG TGATTACTTT AAGATCTTTT 721 GCAGTGATAT T Predicted gene structure (within gDNA segment 163868 to 157600): Exon 1 161502 160963 ( 540 n); cDNA 115 633 ( 519 n); score: 0.832 Intron 1 160962 159861 (1102 n); Pd: 0.000 (s: 0.84), Pa: 1.000 (s: 0) Exon 2 159860 159854 ( 7 n); cDNA 634 640 ( 7 n); score: 0.714 MATCH C10HBa0115K16.1- SGN-E261921+ 0.832 547 0.748 C PGS_C10HBa0115K16.1-_SGN-E261921+ (161502 160963,159860 159854) Alignment (genomic DNA sequence = upper lines): AAATCTATCT AAAAGATGAA TACGGAGGTT TTTGAGTG-A GAAATATAGA AAAGTACCAC 161444 |||||| || || ||||||| | ||||| || ||||||| | ||||| ||| | || || || AAATCTGTCC AA-AGATGAA TGCGGAGATT -TTGAGTGAA GAAATGCAGA ATAG-ACGAC 171 CTACGGAGCT TGTGACGGTT CGTCATGCCC GTGACGGTCC GTAGGTGGCA TCGTAGTGCA 161384 |||| ||||| | ||||||| |||| ||| ||||||||| |||||||||| ||||||||| CTACAGAGCT TATGACGGTC CGTCGTGCTT GTGACGGTCT GTAGGTGGCA GCGTAGTGCA 231 GCTGCTGAAG GAAGATGGGG AAGTCTGACA AAGTGTGGGG TTACGGAGTG CGTGACATAC 161324 ||||||||| |||||||||| ||||||||| ||||| |||| |||||| | | GCTGCTGAAA GAAGATGGGG AAGTCTGACC AAGTGCGGGG CTACGGA--- ---G---T-- 280 CGTCATAGCC ATGACGGTCC GTCCTGCTAG TTTGTCATGA AGATCAGAGA AGTAGTCGTA 161264 |||| | | |||||| ||||||| | || ||||||| || ||||||| ||||||| | --TCAT-G-- A---CGGTCC GTCCTGCAGG TTCGTCATGA AGTTCAGAGA AGTAGTCCCA 332 GTACCCAAAT TCCAAGAGTT CAAGTGTTTT GGAGCGGAGA CCCTTGACGG ACCGTTGTTC 161204 ||||||| || |||||||||| ||||||| || | | || ||| |||| || | |||||||| | GTACCCATAT TCCAAGAGTT CAAGTGTGTT GAAACGAAGA CCCTCGATAG ACCGTTGTGC 392 CTGTGACGAT CCATCATACC TGCCGTCGAG GGTAATGAAG AGAGCAACAC AATAAATTGC 161144 || ||||| | || ||||||| |||||||||| |||||||||| |||| | || || ||||||| CTATGACGGT CCGTCATACC TGCCGTCGAG GGTAATGAAG AGAGAAGCAA AAGAAATTGC 452 ACAAGTTTGG GACGACGGAG TCCATGACGG TCCATCGTGA CCACGACGAT CCGTCGCGAG 161084 | |||| ||| |||||| ||| |||||||||| |||||||||| ||| |||||| |||||| ||| ATAAGTATGG GACGACAGAG TCCATGACGG TCCATCGTGA CCATGACGAT CCGTCGTGAG 512 GTCCGTCGAT CCAACCACAT TTTGACAGAT TTCCAGCAAA TAGAGTCCTA ATTTAATTAG 161024 || ||||| ||| || | | |||| ||||| |||||||||| ||||||||| |||| |||| TTCTGTCGAC CCAGCCGCGT TTTGGCAGAT TTCCAGCAAA TAGAGTCCTT GTTTAGTTAG 572 GTTTTAATTT TTTATAAATA GTTTGAAAAA CCTCATTTTT GAGGTTAGAC CCTTGATTGT 160964 ||||| |||| | |||||||| ||| |||||| |||| ||||| ||||||| || | ||||| GTTTTTATTT TCTATAAATA GTTCGAAAAA CCTCGTTTTT GAGGTTATAC TCCGTATTGT 632 TTTTAGACTC TTTGTTAGAC TCTTGATTTT TGAGCTTCTT TTGTGGATTA GACTTGAGGA 160904 | T......... .......... .......... .......... .......... .......... 633 TTATTGTTAC ACTTATGGAG AATCTTTGTT CTTCAATTAA TTTCAGTAAT TGATGTAATT 160844 .......... .......... .......... .......... .......... .......... 633 GATTGTTGGT GATTTTTGGT GATTAATCAA GTGAACTTTC GGATTTTACT CTTTCTCATT 160784 .......... .......... .......... .......... .......... .......... 633 GAAGTAAGTG CATGAATTCT TATATCATAT ATTTGAATAT TGTGATTATG ACTATGGGCA 160724 .......... .......... .......... .......... .......... .......... 633 ACTAAACTCC ATAACTAGGG TTGTGGGAAC CATAGCCGAA TAATTGTGTA AAACCTAACT 160664 .......... .......... .......... .......... .......... .......... 633 AAAATAACAA TTCTAGAATA GTGTTATGCA TGTATTGATA ATTCTTTCGC TTAGAAGTCT 160604 .......... .......... .......... .......... .......... .......... 633 TTTTAACGGA TGGCCAACGT TAGAAGTCGC CTTAATGCTA CTTGCCGGAC CAAGGAGGTA 160544 .......... .......... .......... .......... .......... .......... 633 GATAATAGGA AAAGAATTAT CAACATAGAT TTAGTGTATA CTATCTAAAA GGCTAGTTTT 160484 .......... .......... .......... .......... .......... .......... 633 TATTGATATG AGGTAATAAC TTAGTCACAT ATCGAGTACG ATGCTTAATA TGAGGTAAAG 160424 .......... .......... .......... .......... .......... .......... 633 ATAAGGGTTA GTATAGCAAC ACACGTACCC GGACCAAGGT GCGGAGTGAA ATTTTCTAGA 160364 .......... .......... .......... .......... .......... .......... 633 TGCCAGACCA AGGATTTAGA AATACATAAC TTATCACTTT GCATGCAAGA TACTAGGAAA 160304 .......... .......... .......... .......... .......... .......... 633 GAATTATTAT AGTTCGAATT ATCAATTTAT GAAACTGTGG GGAACATGTA AACCCTAGTT 160244 .......... .......... .......... .......... .......... .......... 633 ACTTTTATGA ATTGATTAAA CTCCAACATT TGAAGCTGTT AGTTGTCTCC TTTAATTTCG 160184 .......... .......... .......... .......... .......... .......... 633 CTAGTTATTT TCTTTCATTT AGAAATAGAA AACCCCCCTT TTTATCATTT TTGCTTTCCA 160124 .......... .......... .......... .......... .......... .......... 633 AGAAAGCAAT TGACTGAACA GTAGTAATAA TAGACTGAAG TTAGTCTAAA CTATTTTCCT 160064 .......... .......... .......... .......... .......... .......... 633 CGTGGGAACG ATCCCAACCT CATTAGTTGG GTTATTTACT TGACACGGCC GCTTTACTTC 160004 .......... .......... .......... .......... .......... .......... 633 TTATTTGAGA AGTAAGTTTG AGCGTATCAA ATTTTGGCAC CGTTGTCAGG GAAAATAGCT 159944 .......... .......... .......... .......... .......... .......... 633 TTTAGATTAA CTTAAACTTA ATTCTATAGT TTAGTTGATA TTTTCTTGAT TTTACTTTGT 159884 .......... .......... .......... .......... .......... .......... 633 TTTATTGTTT TTGATTCTTG CAGAACCATC 159854 | |||| .......... .......... ...AGACATC 640 hqPGS_C10HBa0115K16.1-_SGN-E261921+ (161502 160963) ******************************************************************************** EST sequence 246 +strand 582 n (File: SGN-E322644+) 1 ATGCTTTGGC TATCTGGTAT GGACGTATGG TGCAAGGTTT ATCTCACGAA AAAGATATAC 61 TGGTGGTCAT GTTCTCAATG TTTTCGACGC CAAGCATCTC CATTCAGTAG TAAGCGATTT 121 ACTTTTTAAG GAAATCTGTC CAAAGATGAA TGCGGAGATT TTGAGTGAAG AAATGCAGAA 181 TAGACGACCT ACAGAGCTTA TGACGGTCCG TCGTGCTTGT GACGGTCTGT AGGTGGCAGC 241 GTAGTGCAGC TGCTGAAAGA AGATGGGGAA GTCTGACCAA GTGCGGGGCT ACGGAGTTCA 301 TGACGGTCCG TCCTGCAGGT TCGTCATGAA GTTCAGAGAA GTAGTCCCAG TACCCATATT 361 CCAAGAGTTC AAGTGTGTTG AAACGAAGAC CCTCGATAGA CCGTTGTGCC TATGACGGTC 421 CGTCATACCT GCCGTCGAGG GTAATGAAGA GAGAAGCAAA AGAAATTGCA TAAGTATGGG 481 ACGACAGAGT CCATGACGGT CCATCGTGAC CATGACGATC CGTCGTGAGT TCTGTCGACC 541 CAGCCGCGTT TTGGCAGATT TCCAGCAAAT AGAGTCCTTG TT Predicted gene structure (within gDNA segment 163868 to 159260): Exon 1 161502 161031 ( 472 n); cDNA 132 582 ( 451 n); score: 0.829 MATCH C10HBa0115K16.1- SGN-E322644+ 0.829 472 0.811 C PGS_C10HBa0115K16.1-_SGN-E322644+ (161502 161031) Alignment (genomic DNA sequence = upper lines): AAATCTATCT AAAAGATGAA TACGGAGGTT TTTGAGTG-A GAAATATAGA AAAGTACCAC 161444 |||||| || || ||||||| | ||||| || ||||||| | ||||| ||| | || || || AAATCTGTCC AA-AGATGAA TGCGGAGATT -TTGAGTGAA GAAATGCAGA ATAG-ACGAC 188 CTACGGAGCT TGTGACGGTT CGTCATGCCC GTGACGGTCC GTAGGTGGCA TCGTAGTGCA 161384 |||| ||||| | ||||||| |||| ||| ||||||||| |||||||||| ||||||||| CTACAGAGCT TATGACGGTC CGTCGTGCTT GTGACGGTCT GTAGGTGGCA GCGTAGTGCA 248 GCTGCTGAAG GAAGATGGGG AAGTCTGACA AAGTGTGGGG TTACGGAGTG CGTGACATAC 161324 ||||||||| |||||||||| ||||||||| ||||| |||| |||||| | | GCTGCTGAAA GAAGATGGGG AAGTCTGACC AAGTGCGGGG CTACGGA--- ---G---T-- 297 CGTCATAGCC ATGACGGTCC GTCCTGCTAG TTTGTCATGA AGATCAGAGA AGTAGTCGTA 161264 |||| | | |||||| ||||||| | || ||||||| || ||||||| ||||||| | --TCAT-G-- A---CGGTCC GTCCTGCAGG TTCGTCATGA AGTTCAGAGA AGTAGTCCCA 349 GTACCCAAAT TCCAAGAGTT CAAGTGTTTT GGAGCGGAGA CCCTTGACGG ACCGTTGTTC 161204 ||||||| || |||||||||| ||||||| || | | || ||| |||| || | |||||||| | GTACCCATAT TCCAAGAGTT CAAGTGTGTT GAAACGAAGA CCCTCGATAG ACCGTTGTGC 409 CTGTGACGAT CCATCATACC TGCCGTCGAG GGTAATGAAG AGAGCAACAC AATAAATTGC 161144 || ||||| | || ||||||| |||||||||| |||||||||| |||| | || || ||||||| CTATGACGGT CCGTCATACC TGCCGTCGAG GGTAATGAAG AGAGAAGCAA AAGAAATTGC 469 ACAAGTTTGG GACGACGGAG TCCATGACGG TCCATCGTGA CCACGACGAT CCGTCGCGAG 161084 | |||| ||| |||||| ||| |||||||||| |||||||||| ||| |||||| |||||| ||| ATAAGTATGG GACGACAGAG TCCATGACGG TCCATCGTGA CCATGACGAT CCGTCGTGAG 529 GTCCGTCGAT CCAACCACAT TTTGACAGAT TTCCAGCAAA TAGAGTCCTA ATT 161031 || ||||| ||| || | | |||| ||||| |||||||||| ||||||||| || TTCTGTCGAC CCAGCCGCGT TTTGGCAGAT TTCCAGCAAA TAGAGTCCTT GTT 582 hqPGS_C10HBa0115K16.1-_SGN-E322644+ (161502 161031) ******************************************************************************** EST sequence 151 +strand 680 n (File: SGN-E346859+) 1 TTGATATGCC TTGGTATAAA AGAAGGCTTG ATCGATTGAC AGAATAAGAT TAGTGGAGCG 61 GGTGTCATGA ACCGACACGT AGAATTAGGG GATCGGGTAT CACGAACTGA CACGTAGAAC 121 TAGGGGATTG ATATACCGTG GTTTCACGGT ATAATTAATA CTTTTTCCTT AAGTTTAGTG 181 TGTCCGAAAG CCCTTTTTGT GCTAATTTTG ATATAAGTTT TTCTTTGTTT TGCAGGAAAT 241 CTGTCTAAAG CTGAATGCGG AGATTTTGAG CGATAAATGC AGAAGAGACC ACCTACGGAG 301 CTTATGACGG TCCGTCGTGC TTGTGACGGT CCGTAGGTGG CAGCGTAGAG AAGCTGCTGA 361 AGGAAGATGG GGAAGTCTGA CCAAGTGTGG GATTACGAAG CTTGTGACGG TCCGTCATGG 421 ATATGACGGT CCGTCCTGCA GGTTCGTCGC GAAGATCAGA GAAGTGATCC CAGTACCCAA 481 ATTCCAAAAG TTGAAGTATT TTGTAACGAA GACCCTCGAC GGACCGTCGT GCCTGTGACG 541 GTCCGTCACA CTTGCCGTCG AGGGGAATGA AGAAAGCAGC AGAAGAATTG CACCCAAGTA 601 TGGGGCGACG GAGCCCATGA CGGTCCGTCA TGACCACGAC GTTCTGTCGC GTGGTCCGTC 661 GACCCAGCCG CGTTTTGGCA Predicted gene structure (within gDNA segment 163479 to 157755): Exon 1 162814 162786 ( 29 n); cDNA 100 127 ( 28 n); score: 0.621 Intron 1 162785 161610 (1176 n); Pd: 0.000 (s: 0), Pa: 0.000 (s: 0.94) Exon 2 161609 161057 ( 553 n); cDNA 128 680 ( 553 n); score: 0.830 MATCH C10HBa0115K16.1- SGN-E346859+ 0.830 582 0.856 C PGS_C10HBa0115K16.1-_SGN-E346859+ (162814 162786,161609 161057) Alignment (genomic DNA sequence = upper lines): TCACTGAGTA ACACATACTC ATTGGGTGAA TAATGATGGG AAGGAACCCG TTGTCTTGTG 162755 |||| | | |||| || | | || || TCACGAACTG ACACGTA-GA ACTAGGGGA. .......... .......... .......... 127 GGCCTCCTGA TTGGAATATT TAATTCATGC ACAACTTCAC GAGCAAGAGG GTCCTCAATA 162695 .......... .......... .......... .......... .......... .......... 127 ACAATATCAC TGTTTATTAT CAACATTAAC ATGTTGATTT GATACATGAT TCTGGGCATC 162635 .......... .......... .......... .......... .......... .......... 127 ACCATTATTA TCAATCCCAA CAACATCATG CACACTTGTG TGAGGAACTT CATCATGATG 162575 .......... .......... .......... .......... .......... .......... 127 AACTATACTA TTAAAACTTG AAGATTCTAG CTTCTCTGTT TTTTCAATAT CTTCAATTGT 162515 .......... .......... .......... .......... .......... .......... 127 TTGATTCTCC ATAAAAATAA TATCACGACT TCTCACGAGT TTCTTCTCAA TTGGATCATA 162455 .......... .......... .......... .......... .......... .......... 127 TAGCCTATAA CTAAACTCAT CAAGTCCATA TCCAATGAAG AGGCATTGCA TTTTCTTGGC 162395 .......... .......... .......... .......... .......... .......... 127 ATCTAACTTT AACCTCTCAT CTTTCGGCAC ATGTACAAAA GTTTTGCAAC TAAATACTCT 162335 .......... .......... .......... .......... .......... .......... 127 CAAATGGTCG TAGGAAACAT CCTTCTGGTA CCAAACACTA TTTGGTACAT CACTTTGCAA 162275 .......... .......... .......... .......... .......... .......... 127 AGAAACATTA GGAGATAAAT TAATCACATG TGCAGAAGTC AATAAAGCCT CATCTCAAAA 162215 .......... .......... .......... .......... .......... .......... 127 TGACTTCGAT AACTTTACTT AACAAAACAA ACGTCTAACT CTTTCCATCA AGGTCCTATT 162155 .......... .......... .......... .......... .......... .......... 127 CATCCTCTCA GCCAAACCAT TAAGTCGAGG AGTCTTACAA GGAGTTTTCT GGTGTCTAAT 162095 .......... .......... .......... .......... .......... .......... 127 ACTATAATAC ATCAAAAATA TAATAACCTA TGATAGAGCC TAACGTGAAG CCTAGTAGCC 162035 .......... .......... .......... .......... .......... .......... 127 CAATGAAGTT TAATCGTGAG CTTTTGAATA AATTTATGGA GACATTAGAA TTAAACTAGG 161975 .......... .......... .......... .......... .......... .......... 127 ATCAAAAGAA AAAGGCAAGA ACCTAAGATT AAGTCTGGGA TCTAGCTCTT GTGAATAAAG 161915 .......... .......... .......... .......... .......... .......... 127 TAAAGGTAAA CCATAGATAC CCCCAAGACC ATTCGGTGAC GGGAAGTAGC TTCGCCCATG 161855 .......... .......... .......... .......... .......... .......... 127 ACCCTTGGTG ATGTGCCAAA AGGCTCTTCT CGCCTAGTCG ACAACATCTT CACTAGCCCT 161795 .......... .......... .......... .......... .......... .......... 127 AGATACTGTA GTAAAGGGTG AAGTGGGTTG AGTGTCATCC AATGGGTTGG AAATTCACCC 161735 .......... .......... .......... .......... .......... .......... 127 ACTTCCCCTC TCATCGCCTA GTGATATGCC CCATTTAGGG AGCTACTATT AAATTGGGTG 161675 .......... .......... .......... .......... .......... .......... 127 AAATAAGAAG AGTTAGGCGA GTCATCTAAG TGATTTGGAG AGTCAAGGGG TGTCAAAGGG 161615 .......... .......... .......... .......... .......... .......... 127 CGGTCTTGAT ATACCGTGGT TTCACGGTAT TTTTAATGCT TTTTCCTTAA GTTTAGTGGG 161555 ||||| |||||||||| |||||||||| ||||| || |||||||||| |||||||| | .....TTGAT ATACCGTGGT TTCACGGTAT AATTAATACT TTTTCCTTAA GTTTAGTGTG 182 TCCAAAAG-C CTTTTTGTAC TAATTTTTAT GTAAGTTTCT CTTT-ATTTG CAAGAAATCT 161497 ||| |||| | |||||||| | ||||||| || ||||||| | |||| |||| || ||||||| TCCGAAAGCC CTTTTTGTGC TAATTTTGAT ATAAGTTTTT CTTTGTTTTG CAGGAAATCT 242 ATCTAAAAGA TGAATACGGA GGTTTTTGAG TGAGAAATAT AGAAAAGTAC CACCTACGGA 161437 ||| |||| ||||| |||| | ||||||| || |||| |||| || || |||||||||| GTCT-AAAGC TGAATGCGGA -GATTTTGAG CGATAAATGC AGAAGAG-AC CACCTACGGA 299 GCTTGTGACG GTTCGTCATG CCCGTGACGG TCCGTAGGTG GCATCGTAGT GCAGCTGCTG 161377 |||| ||||| || |||| || | ||||||| |||||||||| ||| ||||| | |||||||| GCTTATGACG GTCCGTCGTG CTTGTGACGG TCCGTAGGTG GCAGCGTAGA GAAGCTGCTG 359 AAGGAAGATG GGGAAGTCTG ACAAAGTGTG GGGTTACGGA GTGCGTGACA TACCGTCATA 161317 |||||||||| |||||||||| || ||||||| || ||||| | | ||||| ||||||| AAGGAAGATG GGGAAGTCTG ACCAAGTGTG GGATTACGAA GCTTGTGACG GTCCGTCATG 419 GCCATGACGG TCCGTCCTGC TAGTTTGTCA TGAAGATCAG AGAAGTAGTC GTAGTACCCA 161257 | ||||||| |||||||||| ||| ||| ||||||||| |||||| || |||||||| GATATGACGG TCCGTCCTGC AGGTTCGTCG CGAAGATCAG AGAAGTGATC CCAGTACCCA 479 AATTCCAAGA GTTCAAGTGT TTTGGAGCGG AGACCCTTGA CGGACCGTTG TTCCTGTGAC 161197 |||||||| | ||| |||| | |||| | || ||||||| || |||||||| | | |||||||| AATTCCAAAA GTTGAAGTAT TTTGTAACGA AGACCCTCGA CGGACCGTCG TGCCTGTGAC 539 GATCCATCAT ACCTGCCGTC GAGGGTAATG AAGAGAGCAA CACAATAAAT TGCA--CAAG 161139 | ||| ||| || ||||||| ||||| |||| |||| |||| || || ||| |||| |||| GGTCCGTCAC ACTTGCCGTC GAGGGGAATG AAGAAAGCAG CAGAA-GAAT TGCACCCAAG 598 TTTGGGACGA CGGAGTCCAT GACGGTCCAT CGTGACCACG ACGATCCGTC GCGAGGTCCG 161079 | |||| ||| ||||| |||| |||||||| | | |||||||| ||| || ||| ||| |||||| TATGGGGCGA CGGAGCCCAT GACGGTCCGT CATGACCACG ACGTTCTGTC GCGTGGTCCG 658 TCGATCCAAC CACATTTTGA CA 161057 |||| ||| | | | ||||| || TCGACCCAGC CGCGTTTTGG CA 680 hqPGS_C10HBa0115K16.1-_SGN-E346859+ (161609 161057) ******************************************************************************** EST sequence 205 +strand 508 n (File: SGN-E243137+) 1 CGTATGGTGC AAGGTTTATC TCACGAAAAA GATATACTGG TGGTCATGTT CTCAATGTTT 61 TCGACGCCAA GCATCTCCAT TCAGTAGAAA TCTGTCCAAA GATGAATGCG GAGATTTTGA 121 GTGAAGAAAT GCAGAATAGA CGACCTACAG AGCTTATGAC GGTCCGTCGT GCTTGTGACG 181 GTCTGTAGGT GGCAGCGTAG TGCAGCTGCT GAAAGAAGAT GGGGAAGTCT GACCAAGTGC 241 GGGGCTACGG AGTTCATGAC GGTCCGTCCT GCAGGTTCGT CATGAAGTTC AGAGAAGTAG 301 TCCCAGTACC CATATTCCAA GAGTTCAAGT GTGTTGAAAC GAAGACCCTC GATAGACCGT 361 TGTGCCTATG ACGGTCCGTC ATACCTGCCG TCGAGGGTAA TGAAGAGAGA AGCAAAAGAA 421 ATTGCATAAG TATGGGACGA CAGAGTCCAT GACGGTCCAT CGTGACCATG ACGATCCGTC 481 GTGAGTTTTT GTTACCCAAC CGCGTTTT Predicted gene structure (within gDNA segment 163868 to 159560): Exon 1 161504 161061 ( 444 n); cDNA 86 508 ( 423 n); score: 0.816 MATCH C10HBa0115K16.1- SGN-E243137+ 0.816 444 0.874 C PGS_C10HBa0115K16.1-_SGN-E243137+ (161504 161061) Alignment (genomic DNA sequence = upper lines): AGAAATCTAT CTAAAAGATG AATACGGAGG TTTTTGAGTG -AGAAATATA GAAAAGTACC 161446 |||||||| | | || ||||| ||| ||||| || ||||||| |||||| | ||| || || AGAAATCTGT CCAA-AGATG AATGCGGAGA TT-TTGAGTG AAGAAATGCA GAATAG-ACG 142 ACCTACGGAG CTTGTGACGG TTCGTCATGC CCGTGACGGT CCGTAGGTGG CATCGTAGTG 161386 |||||| ||| ||| |||||| | |||| ||| |||||||| | |||||||| || ||||||| ACCTACAGAG CTTATGACGG TCCGTCGTGC TTGTGACGGT CTGTAGGTGG CAGCGTAGTG 202 CAGCTGCTGA AGGAAGATGG GGAAGTCTGA CAAAGTGTGG GGTTACGGAG TGCGTGACAT 161326 |||||||||| | |||||||| |||||||||| | ||||| || || |||||| | | CAGCTGCTGA AAGAAGATGG GGAAGTCTGA CCAAGTGCGG GGCTACGGA- -----G---T 253 ACCGTCATAG CCATGACGGT CCGTCCTGCT AGTTTGTCAT GAAGATCAGA GAAGTAGTCG 161266 |||| | | |||| ||||||||| ||| ||||| |||| ||||| ||||||||| ----TCAT-G --A---CGGT CCGTCCTGCA GGTTCGTCAT GAAGTTCAGA GAAGTAGTCC 303 TAGTACCCAA ATTCCAAGAG TTCAAGTGTT TTGGAGCGGA GACCCTTGAC GGACCGTTGT 161206 |||||||| |||||||||| ||||||||| ||| | || | |||||| || ||||||||| CAGTACCCAT ATTCCAAGAG TTCAAGTGTG TTGAAACGAA GACCCTCGAT AGACCGTTGT 363 TCCTGTGACG ATCCATCATA CCTGCCGTCG AGGGTAATGA AGAGAGCAAC ACAATAAATT 161146 ||| ||||| ||| ||||| |||||||||| |||||||||| |||||| | | | || ||||| GCCTATGACG GTCCGTCATA CCTGCCGTCG AGGGTAATGA AGAGAGAAGC AAAAGAAATT 423 GCACAAGTTT GGGACGACGG AGTCCATGAC GGTCCATCGT GACCACGACG ATCCGTCGCG 161086 ||| |||| | |||||||| | |||||||||| |||||||||| ||||| |||| |||||||| | GCATAAGTAT GGGACGACAG AGTCCATGAC GGTCCATCGT GACCATGACG ATCCGTCGTG 483 AGGTCCGTCG ATCCAACCAC ATTTT 161061 || | | |||||| | |||| AGTTTTTGTT ACCCAACCGC GTTTT 508 hqPGS_C10HBa0115K16.1-_SGN-E243137+ (161504 161061) ******************************************************************************** EST sequence 29 -strand 800 n (File: SGN-E540293-) 1 AGTAGCCTAA ACTAAGTCTA TGTGAGAGGT CTAGAGCCAA GGAAGAGGGC TAGGGCAGCC 61 AAATTTTCCC CAGACATTTC CCACCTTCTC ACGACCACCG TAATGGACAA TGCTGAGGAC 121 CACAGATCGT GGTGGGCTAG GCTGTGGCTA GGTGAAATCT GCCCAAAATA GCCCCCTCCA 181 CACAAGCTAT TTCACGGCTC GTGAAAGCTA TTATTGGCCG TGGAAAGGCT CGTGGTGGGG 241 ACTTAGTTTT GAGGGGTTAA GGAAGTGGTG GCCAAGTGAT ATACCGTGGT TTCATGGTAT 301 TATTAATACT TTTTCCTTAA GTTTAGTGTG TCTAAAATCC TTTTTGTGCT AATTTCTATA 361 TTAGTTTCTT TTTATTTTGC AGGAAATCTG TCCAAAGCTG AATGCGGAGA TTTTGAGCGA 421 AGAAATGCAG AAGAGACCAC CTACGGAGCT TATGACGGTC CGTCGTGCTT GTGACGGTCC 481 GTAGGTGTCA GCGTAGTGCA GCTGCTGAAG GAAGATGGGG AAGTCTGACC AAGTATGGGG 541 TTACGAAGCT TGTGACGGTC CATCGTGTCT ATGACGGTCC GTCCTACAGG TTCGTCATGA 601 AGTTCAGAGA AGTAATCCCA GTACCCATAT TCCAAGAGTT AAAGTGTTTT GGAACGAAGG 661 CCCTCGACGG ACCGTTGTGC CTATGACGGT CCGCCATACT TGCCGTTGAG GGTAATGAAG 721 AAGAGCAACA AAAGAAATTG CATAAGTATG GGACGACGGA GTCCATGACG GTCCGTCGTG 781 ACCATGACGG ACCTCGCGAC Predicted gene structure (within gDNA segment 163868 to 158045): Exon 1 161608 161085 ( 524 n); cDNA 277 799 ( 523 n); score: 0.843 MATCH C10HBa0115K16.1- SGN-E540293- 0.843 524 0.655 C PGS_C10HBa0115K16.1-_SGN-E540293- (161608 161085) Alignment (genomic DNA sequence = upper lines): TGATATACCG TGGTTTCACG GTATTTTTAA TGCTTTTTCC TTAAGTTTAG TGGGTCCAAA 161549 |||||||||| |||||||| | ||||| |||| | |||||||| |||||||||| || ||| ||| TGATATACCG TGGTTTCATG GTATTATTAA TACTTTTTCC TTAAGTTTAG TGTGTCTAAA 336 AGCCTTTTTG TACTAATTTT TATGTAAGTT TCTCTTTA-T TTGCAAGAAA TCTATCTAAA 161490 | |||||||| | ||||||| ||| | |||| ||| |||| | ||||| |||| ||| || || ATCCTTTTTG TGCTAATTTC TATATTAGTT TCTTTTTATT TTGCAGGAAA TCTGTC-CAA 395 AGATGAATAC GGAGGTTTTT GAGTG-AGAA ATATAGAAAA GTACCACCTA CGGAGCTTGT 161431 || ||||| | ||| | |||| ||| | |||| || |||| | | |||||||| |||||||| | AGCTGAATGC GGA-GATTTT GAGCGAAGAA ATGCAGAAGA G-ACCACCTA CGGAGCTTAT 453 GACGGTTCGT CATGCCCGTG ACGGTCCGTA GGTGGCATCG TAGTGCAGCT GCTGAAGGAA 161371 |||||| ||| | ||| ||| |||||||||| |||| || || |||||||||| |||||||||| GACGGTCCGT CGTGCTTGTG ACGGTCCGTA GGTGTCAGCG TAGTGCAGCT GCTGAAGGAA 513 GATGGGGAAG TCTGACAAAG TGTGGGGTTA CGGAGTGCGT GACATACCGT CATAGCCATG 161311 |||||||||| |||||| ||| | |||||||| || || || ||| || | | | | ||| GATGGGGAAG TCTGACCAAG TATGGGGTTA CGAAGCTTGT GACGGTCCAT CGTGTCTATG 573 ACGGTCCGTC CTGCTAGTTT GTCATGAAGA TCAGAGAAGT AGTCGTAGTA CCCAAATTCC 161251 |||||||||| || | ||| ||||||||| |||||||||| | || |||| |||| ||||| ACGGTCCGTC CTACAGGTTC GTCATGAAGT TCAGAGAAGT AATCCCAGTA CCCATATTCC 633 AAGAGTTCAA GTGTTTTGGA GCGGAGACCC TTGACGGACC GTTGTTCCTG TGACGATCCA 161191 ||||||| || |||||||||| || || ||| | |||||||| ||||| ||| ||||| ||| AAGAGTTAAA GTGTTTTGGA ACGAAGGCCC TCGACGGACC GTTGTGCCTA TGACGGTCCG 693 TCATACCTGC CGTCGAGGGT AATGAAG-AG AGCAACACAA TAAATTGCAC AAGTTTGGGA 161132 ||||| ||| ||| |||||| ||||||| || ||||||| || |||||||| |||| ||||| CCATACTTGC CGTTGAGGGT AATGAAGAAG AGCAACAAAA GAAATTGCAT AAGTATGGGA 753 CGACGGAGTC CATGACGGTC CATCGTGACC ACGACGATCC GTCGCGA 161085 |||||||||| |||||||||| | |||||||| | |||| || |||||| CGACGGAGTC CATGACGGTC CGTCGTGACC ATGACGGACC -TCGCGA 799 hqPGS_C10HBa0115K16.1-_SGN-E540293- (161608 161085) ******************************************************************************** EST sequence 39 -strand 534 n (File: SGN-E286708-) 1 TGGTGGCCAA GTGATATACC GTGGTTTCAT GGTATTATTA ATACTTTTTC CTTAAGTTTA 61 GTGTGTCTAA AATCCTTTTT GTGCTAATTT CTATATTAGT TTCTTTTTAT TTTGCAGGAA 121 ATCTGTCCAA AGCTGAATGC GGAGATTTTG AGCGAAGAAA TGCAGAAGAG ACCACCTACG 181 GAGCTTATGA CGGTCCGTCG TGCTTGTGAC GGTCCGTAGG TGTCAGCGTA GTGCAGCTGC 241 TGAAGGAAGA TGGGGAAGTC TGACCAAGTA TGGGGTTACG AAGCTTGTGA CGGTCCATCG 301 TGTCTATGAC GGTCCGTCCT ACAGGTTCGT CATGAAGTTC AGAGAAGTAA TCCCAGTACC 361 CATATTCCAA GAGTTAAAGT GTTTTGGAAC GAAGGCCCTC GACGGACCGT TGTGCCTATG 421 ACGGTCCGCC ATACTTGCCG TTGAGGGTAA TGAAGAAGAG CAACAAAAGA AATTGCATAA 481 GTATGGGACG ACGGAGTCCA TGACGGTCCG TCGTGACCAT GACGGACCTC GCGA Predicted gene structure (within gDNA segment 162328 to 158055): Exon 1 161608 161085 ( 524 n); cDNA 12 534 ( 523 n); score: 0.843 MATCH C10HBa0115K16.1- SGN-E286708- 0.843 524 0.981 C PGS_C10HBa0115K16.1-_SGN-E286708- (161608 161085) Alignment (genomic DNA sequence = upper lines): TGATATACCG TGGTTTCACG GTATTTTTAA TGCTTTTTCC TTAAGTTTAG TGGGTCCAAA 161549 |||||||||| |||||||| | ||||| |||| | |||||||| |||||||||| || ||| ||| TGATATACCG TGGTTTCATG GTATTATTAA TACTTTTTCC TTAAGTTTAG TGTGTCTAAA 71 AGCCTTTTTG TACTAATTTT TATGTAAGTT TCTCTTTAT- TTGCAAGAAA TCTATCTAAA 161490 | |||||||| | ||||||| ||| | |||| ||| ||||| ||||| |||| ||| || || ATCCTTTTTG TGCTAATTTC TATATTAGTT TCTTTTTATT TTGCAGGAAA TCTGTC-CAA 130 AGATGAATAC GGAGGTTTTT GAGTG-AGAA ATATAGAAAA GTACCACCTA CGGAGCTTGT 161431 || ||||| | ||| | |||| ||| | |||| || |||| | | |||||||| |||||||| | AGCTGAATGC GGA-GATTTT GAGCGAAGAA ATGCAGAAGA G-ACCACCTA CGGAGCTTAT 188 GACGGTTCGT CATGCCCGTG ACGGTCCGTA GGTGGCATCG TAGTGCAGCT GCTGAAGGAA 161371 |||||| ||| | ||| ||| |||||||||| |||| || || |||||||||| |||||||||| GACGGTCCGT CGTGCTTGTG ACGGTCCGTA GGTGTCAGCG TAGTGCAGCT GCTGAAGGAA 248 GATGGGGAAG TCTGACAAAG TGTGGGGTTA CGGAGTGCGT GACATACCGT CATAGCCATG 161311 |||||||||| |||||| ||| | |||||||| || || || ||| || | | | | ||| GATGGGGAAG TCTGACCAAG TATGGGGTTA CGAAGCTTGT GACGGTCCAT CGTGTCTATG 308 ACGGTCCGTC CTGCTAGTTT GTCATGAAGA TCAGAGAAGT AGTCGTAGTA CCCAAATTCC 161251 |||||||||| || | ||| ||||||||| |||||||||| | || |||| |||| ||||| ACGGTCCGTC CTACAGGTTC GTCATGAAGT TCAGAGAAGT AATCCCAGTA CCCATATTCC 368 AAGAGTTCAA GTGTTTTGGA GCGGAGACCC TTGACGGACC GTTGTTCCTG TGACGATCCA 161191 ||||||| || |||||||||| || || ||| | |||||||| ||||| ||| ||||| ||| AAGAGTTAAA GTGTTTTGGA ACGAAGGCCC TCGACGGACC GTTGTGCCTA TGACGGTCCG 428 TCATACCTGC CGTCGAGGGT AATGAAG-AG AGCAACACAA TAAATTGCAC AAGTTTGGGA 161132 ||||| ||| ||| |||||| ||||||| || ||||||| || |||||||| |||| ||||| CCATACTTGC CGTTGAGGGT AATGAAGAAG AGCAACAAAA GAAATTGCAT AAGTATGGGA 488 CGACGGAGTC CATGACGGTC CATCGTGACC ACGACGATCC GTCGCGA 161085 |||||||||| |||||||||| | |||||||| | |||| || |||||| CGACGGAGTC CATGACGGTC CGTCGTGACC ATGACGGACC -TCGCGA 534 hqPGS_C10HBa0115K16.1-_SGN-E286708- (161608 161085) ******************************************************************************** EST sequence 254 +strand 498 n (File: SGN-E258752+) 1 TATGGACGTA TGGTGCAAGG TTTATCTCAC GAAAAAGATA TACTGGTGGT CATGTTCTCA 61 ATGTTTTCGA CGCCAAGCAT CTCCATTCAG TAGTAAGCGA TTTACTTTTT AAGGAAATCT 121 GTCCAAAGAT GAATGCGGAG ATTTTGAGTG AAGAAATGCA GAATAGACGA CCTACAGAGC 181 TTATGACGGT CCGTCGTGCT TGTGACGGTC TGTAGGTGGC AGCGTAGTGC AGCTGCTGAA 241 AGAAGATGGG GAAGTCTGAC CAAGTGCGGG GCTACGGAGT TCATGACGGT CCGTCCTGCA 301 GGTTCGTCAT GAAGTTCAGA GAAGTAGTCC CAGTACCCAT ATTCCAAGAG TTCAAGTGTG 361 TTGAAACGAA GACCCTCGAT AGACCGTTGT GCCTATGACG GTCCGTCATA CCTGCCGTCG 421 AGGGTAATGA AGAGAGAAGC AAAAGAAATT GCATAAGTAT GGGACGACAG AGTCCATGAC 481 GGTCCATCGT GACCATGA Predicted gene structure (within gDNA segment 163868 to 159930): Exon 1 161502 161098 ( 405 n); cDNA 115 498 ( 384 n); score: 0.826 MATCH C10HBa0115K16.1- SGN-E258752+ 0.826 405 0.813 C PGS_C10HBa0115K16.1-_SGN-E258752+ (161502 161098) Alignment (genomic DNA sequence = upper lines): AAATCTATCT AAAAGATGAA TACGGAGGTT TTTGAGTG-A GAAATATAGA AAAGTACCAC 161444 |||||| || || ||||||| | ||||| || ||||||| | ||||| ||| | || || || AAATCTGTCC AA-AGATGAA TGCGGAGATT -TTGAGTGAA GAAATGCAGA ATAG-ACGAC 171 CTACGGAGCT TGTGACGGTT CGTCATGCCC GTGACGGTCC GTAGGTGGCA TCGTAGTGCA 161384 |||| ||||| | ||||||| |||| ||| ||||||||| |||||||||| ||||||||| CTACAGAGCT TATGACGGTC CGTCGTGCTT GTGACGGTCT GTAGGTGGCA GCGTAGTGCA 231 GCTGCTGAAG GAAGATGGGG AAGTCTGACA AAGTGTGGGG TTACGGAGTG CGTGACATAC 161324 ||||||||| |||||||||| ||||||||| ||||| |||| |||||| | | GCTGCTGAAA GAAGATGGGG AAGTCTGACC AAGTGCGGGG CTACGGA--- ---G---T-- 280 CGTCATAGCC ATGACGGTCC GTCCTGCTAG TTTGTCATGA AGATCAGAGA AGTAGTCGTA 161264 |||| | | |||||| ||||||| | || ||||||| || ||||||| ||||||| | --TCAT-G-- A---CGGTCC GTCCTGCAGG TTCGTCATGA AGTTCAGAGA AGTAGTCCCA 332 GTACCCAAAT TCCAAGAGTT CAAGTGTTTT GGAGCGGAGA CCCTTGACGG ACCGTTGTTC 161204 ||||||| || |||||||||| ||||||| || | | || ||| |||| || | |||||||| | GTACCCATAT TCCAAGAGTT CAAGTGTGTT GAAACGAAGA CCCTCGATAG ACCGTTGTGC 392 CTGTGACGAT CCATCATACC TGCCGTCGAG GGTAATGAAG AGAGCAACAC AATAAATTGC 161144 || ||||| | || ||||||| |||||||||| |||||||||| |||| | || || ||||||| CTATGACGGT CCGTCATACC TGCCGTCGAG GGTAATGAAG AGAGAAGCAA AAGAAATTGC 452 ACAAGTTTGG GACGACGGAG TCCATGACGG TCCATCGTGA CCACGA 161098 | |||| ||| |||||| ||| |||||||||| |||||||||| ||| || ATAAGTATGG GACGACAGAG TCCATGACGG TCCATCGTGA CCATGA 498 hqPGS_C10HBa0115K16.1-_SGN-E258752+ (161502 161098) ******************************************************************************** EST sequence 22 -strand 673 n (File: SGN-E352282-) 1 AATTCAAGCA TAATAGTGAT AACATGCATA AACATGATGA GAATGATTGG GATTGATAGT 61 CAAATGATTG CGAACGCTAA AATATAGATA CTCTNGTACA AAGATTTTGT AGTGAGTCAT 121 AGTGTGTCAC TTGAGGACAA ACAACAAATT TAAGTTGAGG GTGTTGATGT ACCGTGGTTT 181 CACGGTATTT TTAATGCTTT TTCCTTAAGT TTAGTGTGTG TCCAAAAGCC TTTTTGTATT 241 GATTTTTATG TCAGTTTCTA CTTATTTACA GGTTATCTGT CCAAAGATGA ACGCAGAAGT 301 TTTTGAGTGA TAAATGCAGC AGAGACCACC TACGGAGCTT ATGACGATCC GTCGAGTCTG 361 TGACGGTCCA TAGGTGTCAT CATAGTGAGA AGAGAAGTTG CTGAAGGAAG ATGGGGAAGT 421 ATGACCTAGT GTGGGATTAC GGAAGTCCAT GACGGACCGT CATTGCCACA ACGGTCCATC 481 CTGCTGGTTC ATCATAATGA TCAGAGAGTA CTCCCAGTAC CCAAATTCAA ATAAGTTAAA 541 GTATTATGGA ACGGAGACCC TCGACAGACC ATCGTTCTTG GAACAGTCTG TCATACCTGT 601 TTGTTGAGGG TAATGAAGAT AGAAGAAGAA GAATATGTGA AGTATGGGAC GACGGAGGCC 661 ATGACGGCCC GTC Predicted gene structure (within gDNA segment 163868 to 156587): Exon 1 163113 163097 ( 17 n); cDNA 146 160 ( 15 n); score: 0.706 Intron 1 163096 161613 (1484 n); Pd: 0.900 (s: 0), Pa: 0.000 (s: 0.96) Exon 2 161612 161108 ( 505 n); cDNA 161 673 ( 513 n); score: 0.758 MATCH C10HBa0115K16.1- SGN-E352282- 0.758 522 0.776 C PGS_C10HBa0115K16.1-_SGN-E352282- (163113 163097,161612 161108) Alignment (genomic DNA sequence = upper lines): AAATGTACGA ATCGAGGATA TCTTTATGAT AAGAAAAAGT ATTTCACCAA AGTCAATACC 163054 |||| || | | |||| AAATTTA--A GTTGAGG... .......... .......... .......... .......... 160 CTTCTTTTGA CCAAATCCCT CAACAACCAA TCTAAATTTG TACCTGGGCT TCAAGTTGTG 162994 .......... .......... .......... .......... .......... .......... 160 TTCTTTAACT TTAACTTTGA ACATCCACTT GTTCTTCAAA TCTTTCATTC CCTTGGGCAA 162934 .......... .......... .......... .......... .......... .......... 160 TTTTACCAAC TCATAAGTGT GGTCCTCATG TATAGACTTC ATGTCATCTT CCGTGAATTC 162874 .......... .......... .......... .......... .......... .......... 160 AATCCCTTGA TCCTTGTTCT TATCTTTTGG ACTACTCATA ACATTCATGT TCTTCACAGT 162814 .......... .......... .......... .......... .......... .......... 160 CACTGAGTAA CACATACTCA TTGGGTGAAT AATGATGGGA AGGAACCCGT TGTCTTGTGG 162754 .......... .......... .......... .......... .......... .......... 160 GCCTCCTGAT TGGAATATTT AATTCATGCA CAACTTCACG AGCAAGAGGG TCCTCAATAA 162694 .......... .......... .......... .......... .......... .......... 160 CAATATCACT GTTTATTATC AACATTAACA TGTTGATTTG ATACATGATT CTGGGCATCA 162634 .......... .......... .......... .......... .......... .......... 160 CCATTATTAT CAATCCCAAC AACATCATGC ACACTTGTGT GAGGAACTTC ATCATGATGA 162574 .......... .......... .......... .......... .......... .......... 160 ACTATACTAT TAAAACTTGA AGATTCTAGC TTCTCTGTTT TTTCAATATC TTCAATTGTT 162514 .......... .......... .......... .......... .......... .......... 160 TGATTCTCCA TAAAAATAAT ATCACGACTT CTCACGAGTT TCTTCTCAAT TGGATCATAT 162454 .......... .......... .......... .......... .......... .......... 160 AGCCTATAAC TAAACTCATC AAGTCCATAT CCAATGAAGA GGCATTGCAT TTTCTTGGCA 162394 .......... .......... .......... .......... .......... .......... 160 TCTAACTTTA ACCTCTCATC TTTCGGCACA TGTACAAAAG TTTTGCAACT AAATACTCTC 162334 .......... .......... .......... .......... .......... .......... 160 AAATGGTCGT AGGAAACATC CTTCTGGTAC CAAACACTAT TTGGTACATC ACTTTGCAAA 162274 .......... .......... .......... .......... .......... .......... 160 GAAACATTAG GAGATAAATT AATCACATGT GCAGAAGTCA ATAAAGCCTC ATCTCAAAAT 162214 .......... .......... .......... .......... .......... .......... 160 GACTTCGATA ACTTTACTTA ACAAAACAAA CGTCTAACTC TTTCCATCAA GGTCCTATTC 162154 .......... .......... .......... .......... .......... .......... 160 ATCCTCTCAG CCAAACCATT AAGTCGAGGA GTCTTACAAG GAGTTTTCTG GTGTCTAATA 162094 .......... .......... .......... .......... .......... .......... 160 CTATAATACA TCAAAAATAT AATAACCTAT GATAGAGCCT AACGTGAAGC CTAGTAGCCC 162034 .......... .......... .......... .......... .......... .......... 160 AATGAAGTTT AATCGTGAGC TTTTGAATAA ATTTATGGAG ACATTAGAAT TAAACTAGGA 161974 .......... .......... .......... .......... .......... .......... 160 TCAAAAGAAA AAGGCAAGAA CCTAAGATTA AGTCTGGGAT CTAGCTCTTG TGAATAAAGT 161914 .......... .......... .......... .......... .......... .......... 160 AAAGGTAAAC CATAGATACC CCCAAGACCA TTCGGTGACG GGAAGTAGCT TCGCCCATGA 161854 .......... .......... .......... .......... .......... .......... 160 CCCTTGGTGA TGTGCCAAAA GGCTCTTCTC GCCTAGTCGA CAACATCTTC ACTAGCCCTA 161794 .......... .......... .......... .......... .......... .......... 160 GATACTGTAG TAAAGGGTGA AGTGGGTTGA GTGTCATCCA ATGGGTTGGA AATTCACCCA 161734 .......... .......... .......... .......... .......... .......... 160 CTTCCCCTCT CATCGCCTAG TGATATGCCC CATTTAGGGA GCTACTATTA AATTGGGTGA 161674 .......... .......... .......... .......... .......... .......... 160 AATAAGAAGA GTTAGGCGAG TCATCTAAGT GATTTGGAGA GTCAAGGGGT GTCAAAGGGC 161614 .......... .......... .......... .......... .......... .......... 160 GGTCTTGATA TACCGTGGTT TCACGGTATT TTTAATGCTT TTTCCTTAAG TTTAGTG-G- 161556 || ||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||| | .GTGTTGATG TACCGTGGTT TCACGGTATT TTTAATGCTT TTTCCTTAAG TTTAGTGTGT 219 GTCCAAAAGC CTTTTTGTAC TAATTTTTAT GTAAGTTTCT CTTTATTTGC AAGAAATCTA 161496 |||||||||| ||||||||| | |||||||| || ||||||| |||||| | | | |||| GTCCAAAAGC CTTTTTGTAT TGATTTTTAT GTCAGTTTCT ACTTATTTAC AGGTTATCTG 279 TCTAAAAGAT GAATACGGAG GTTTTTGAGT GAGAAATATA GAAAAGTACC ACCTACGGAG 161436 || |||||| ||| | || |||||||||| || |||| | | | || ||| |||||||||| TC-CAAAGAT GAACGCAGAA GTTTTTGAGT GATAAATGCA GCAGAG-ACC ACCTACGGAG 337 CTTGTGACGG TTCGTCATGC CCGTGACGGT CCGTAGGTGG CATC---GT- ---AGTGCAG 161383 ||| ||||| | |||| | | |||||||| || |||||| |||| || || | || CTTATGACGA TCCGTCGAGT CTGTGACGGT CCATAGGTGT CATCATAGTG AGAAGAGAAG 397 CTGCTGAAGG AAGATGGGGA AGTCTGACAA AGTGTGGGGT TACGG-AGTG CGTGACATAC 161324 ||||||||| |||||||||| ||| |||| |||||||| | ||||| ||| | |||| || TTGCTGAAGG AAGATGGGGA AGTATGACCT AGTGTGGGAT TACGGAAGTC CATGACGGAC 457 CGTCATAGCC ATGACGGTCC GTCCTGCTAG TTTGTCATGA AGATCAGAGA AGTAGTCGTA 161264 |||||| ||| | ||||||| ||||||| | || |||| | |||||||| |||| || | CGTCATTGCC ACAACGGTCC ATCCTGCTGG TTCATCATAA TGATCAGAG- AGTACTCCCA 516 GTACCCAAAT TCCAA-GAGT TCAAGTGTTT TGGAGCGGAG ACCCTTGACG GACCGTTGTT 161205 |||||||||| || || ||| | |||| || |||| ||||| ||||| ||| |||| | ||| GTACCCAAAT TCAAATAAGT TAAAGTATTA TGGAACGGAG ACCCTCGACA GACCATCGTT 576 CCTGTGACGA TCCATCATAC CTG-CCGTCG AGGGTAATGA AGAGAGCAAC ACAATAAATT 161146 | || || || |||||| ||| || | |||||||||| ||| || | | || || | CTTGGAACAG TCTGTCATAC CTGTTTGTTG AGGGTAATGA AGATAGAAGA AGAAGAATAT 636 GCACAAGTTT GGGACGACGG AGTCCATGAC GGTCCATC 161108 | |||| | |||||||||| || ||||||| || || || G-TGAAGTAT GGGACGACGG AGGCCATGAC GGCCCGTC 673 hqPGS_C10HBa0115K16.1-_SGN-E352282- (161612 161108) ******************************************************************************** EST sequence 43 -strand 522 n (File: SGN-E243969-) 1 GGTATAATTA ATACTTTTGC CTTAAGTTTA AAGTGTCCGA AAGCCTTTTT TGTGCTAATT 61 TTGATATAAG TTTCTCTTTG TTTTGCAGGA AATCTGTCAA AAGCTGAAAG CGGAGATTTT 121 GAGCAAAAAA ATGCAGAAGA GACCACCTAC GGAGCTTTTG AAGGTCTGTC GTGCTTGTGA 181 CGGTCCGTAG GTGGTAGCGT AGAGAAGCTG CTGAAGGAAG ATGGGGAAGT CTGACCAAGT 241 GTGGGATTAC GAAGCTTGTG ACGGTCCGTC ATGGCTATGA CGGTCCGTCC TGCAGGTTCG 301 TCGTGAAGAT CAGAGAAGTG ATCCCAGTAC CCAGATTCCA AGAGTTGAAG TATTTTGAAA 361 CGAAGACCCT CGACAGACCG TTGTACCTAT GACGGTCCGT TACACTTGCC GTCGAGGGGA 421 ATGAAGAAAG CAGCAGAAGA AATTGCACCA AGTATGGGAC GACAGAGTCC ACGACGGTCC 481 GTCGCGTGGT CCGTCGACCA AGCCGCGTTT TGGCAGATTT CC Predicted gene structure (within gDNA segment 163783 to 158641): Exon 1 161589 161108 ( 482 n); cDNA 1 483 ( 483 n); score: 0.811 MATCH C10HBa0115K16.1- SGN-E243969- 0.811 482 0.923 C PGS_C10HBa0115K16.1-_SGN-E243969- (161589 161108) Alignment (genomic DNA sequence = upper lines): GGTATTTTTA ATGCTTTTTC CTTAAGTTTA GTGGGTCCAA AAGCC-TTTT TGTACTAATT 161531 ||||| ||| || ||||| | |||||||||| | |||| | ||||| |||| ||| |||||| GGTATAATTA ATACTTTTGC CTTAAGTTTA AAGTGTCCGA AAGCCTTTTT TGTGCTAATT 60 TTTATGTAAG TTTCTCTTT- ATTTGCAAGA AATCTATCTA AAAGATGAAT ACGGAGGTTT 161472 || || |||| ||||||||| |||||| || ||||| || | |||| |||| ||||| ||| TTGATATAAG TTTCTCTTTG TTTTGCAGGA AATCTGTC-A AAAGCTGAAA GCGGAGATTT 119 TTGAGTGAGA A-ATATAGAA AAGTACCACC TACGGAGCTT GTGACGGTTC GTCATGCCCG 161413 | ||| | | | || |||| || |||||| |||||||||| ||| ||| ||| ||| | T-GAGCAAAA AAATGCAGAA GAG-ACCACC TACGGAGCTT TTGAAGGTCT GTCGTGCTTG 177 TGACGGTCCG TAGGTGGCAT CGTAGTGCAG CTGCTGAAGG AAGATGGGGA AGTCTGACAA 161353 |||||||||| ||||||| | ||||| | || |||||||||| |||||||||| |||||||| | TGACGGTCCG TAGGTGGTAG CGTAGAGAAG CTGCTGAAGG AAGATGGGGA AGTCTGACCA 237 AGTGTGGGGT TACGGAGTGC GTGACATACC GTCATAGCCA TGACGGTCCG TCCTGCTAGT 161293 |||||||| | |||| || ||||| || ||||| || | |||||||||| |||||| || AGTGTGGGAT TACGAAGCTT GTGACGGTCC GTCATGGCTA TGACGGTCCG TCCTGCAGGT 297 TTGTCATGAA GATCAGAGAA GTAGTCGTAG TACCCAAATT CCAAGAGTTC AAGTGTTTTG 161233 | ||| |||| |||||||||| || || || |||||| ||| ||||||||| |||| ||||| TCGTCGTGAA GATCAGAGAA GTGATCCCAG TACCCAGATT CCAAGAGTTG AAGTATTTTG 357 GAGCGGAGAC CCTTGACGGA CCGTTGTTCC TGTGACGATC CATCATACCT GCCGTCGAGG 161173 | || |||| ||| ||| || ||||||| || | ||||| || | | | || | |||||||||| AAACGAAGAC CCTCGACAGA CCGTTGTACC TATGACGGTC CGTTACACTT GCCGTCGAGG 417 GTAATGAAGA GAGCAACACA ATAAATTGCA -CAAGTTTGG GACGACGGAG TCCATGACGG 161114 | |||||||| |||| || | | |||||||| ||||| ||| |||||| ||| |||| ||||| GGAATGAAGA AAGCAGCAGA AGAAATTGCA CCAAGTATGG GACGACAGAG TCCACGACGG 477 TCCATC 161108 ||| || TCCGTC 483 hqPGS_C10HBa0115K16.1-_SGN-E243969- (161589 161108) ******************************************************************************** EST sequence 183 +strand 464 n (File: SGN-E255290+) 1 TATGGACGTA TGGTGCAAGG TTTATCTCAC GAAAAAGATA TACTGGTGGT CATGTTCTCA 61 ATGTTTTCGA CGCCAAGCAT CTCCATTCAG TAGTAAGCGA TTTACTTTTT AAGGAAATCT 121 GTCCAAAGAT GAATGCGGAG ATTTTGAGTG AAGAAATGCA GAATAGACGA CCTACAGAGC 181 TTATGACGGT CCGTCGTGCT TGTGACGGTC TGTAGGTGGC AGCGTAGTGC AGCTGCTGAA 241 AGAAGATGGG GAAGTCTGAC CAAGTGCGGG GCTACGGAGT TCATGACGGT CCGTCCTGCA 301 GGTTCGTCAT GAAGTTCAGA GAAGTAGTCC CAGTACCCAT ATTCCAAGAG TTCAAGTGTG 361 TTGAAACGAA GACCCTCGAT AGACCGTTGT GCCTATGACG GTCCGTCATA CCTGCCGTCG 421 AGGGTAATGA AGAGAGAAGC AAAAGAAATT GCATAAGTAT GGGA Predicted gene structure (within gDNA segment 163868 to 160270): Exon 1 161502 161132 ( 371 n); cDNA 115 464 ( 350 n); score: 0.815 MATCH C10HBa0115K16.1- SGN-E255290+ 0.815 371 0.800 C PGS_C10HBa0115K16.1-_SGN-E255290+ (161502 161132) Alignment (genomic DNA sequence = upper lines): AAATCTATCT AAAAGATGAA TACGGAGGTT TTTGAGTG-A GAAATATAGA AAAGTACCAC 161444 |||||| || || ||||||| | ||||| || ||||||| | ||||| ||| | || || || AAATCTGTCC AA-AGATGAA TGCGGAGATT -TTGAGTGAA GAAATGCAGA ATAG-ACGAC 171 CTACGGAGCT TGTGACGGTT CGTCATGCCC GTGACGGTCC GTAGGTGGCA TCGTAGTGCA 161384 |||| ||||| | ||||||| |||| ||| ||||||||| |||||||||| ||||||||| CTACAGAGCT TATGACGGTC CGTCGTGCTT GTGACGGTCT GTAGGTGGCA GCGTAGTGCA 231 GCTGCTGAAG GAAGATGGGG AAGTCTGACA AAGTGTGGGG TTACGGAGTG CGTGACATAC 161324 ||||||||| |||||||||| ||||||||| ||||| |||| |||||| | | GCTGCTGAAA GAAGATGGGG AAGTCTGACC AAGTGCGGGG CTACGGA--- ---G---T-- 280 CGTCATAGCC ATGACGGTCC GTCCTGCTAG TTTGTCATGA AGATCAGAGA AGTAGTCGTA 161264 |||| | | |||||| ||||||| | || ||||||| || ||||||| ||||||| | --TCAT-G-- A---CGGTCC GTCCTGCAGG TTCGTCATGA AGTTCAGAGA AGTAGTCCCA 332 GTACCCAAAT TCCAAGAGTT CAAGTGTTTT GGAGCGGAGA CCCTTGACGG ACCGTTGTTC 161204 ||||||| || |||||||||| ||||||| || | | || ||| |||| || | |||||||| | GTACCCATAT TCCAAGAGTT CAAGTGTGTT GAAACGAAGA CCCTCGATAG ACCGTTGTGC 392 CTGTGACGAT CCATCATACC TGCCGTCGAG GGTAATGAAG AGAGCAACAC AATAAATTGC 161144 || ||||| | || ||||||| |||||||||| |||||||||| |||| | || || ||||||| CTATGACGGT CCGTCATACC TGCCGTCGAG GGTAATGAAG AGAGAAGCAA AAGAAATTGC 452 ACAAGTTTGG GA 161132 | |||| ||| || ATAAGTATGG GA 464 hqPGS_C10HBa0115K16.1-_SGN-E255290+ (161502 161132) Total number of EST alignments reported: 273 ________________________________________________________________________________ Predicted gene locations (23) in segment 1 to 163868: PGL 1 (- strand): 74696 74034 AGS-1 (74696 74034) SCR (e 0.787) Exon 1 74696 74034 ( 663 n); score: 0.787 PGS (74696 74034) SGN-E241731- 3-phase translation of AGS-1 (-strand): . . . . . . 74696 TTATATCATATATATGAATATTGTTATTATGATTATGGGTAACTAAACTCCAGAACTAGG L Y H I Y E Y C Y Y D Y G - L N S R T R Y I I Y M N I V I M I M G N - T P E L G I S Y I - I L L L - L W V T K L Q N - . . . . . . 74636 ATTCTGGGAAACATGGGTGAATAATGAGGTAAAATGTAACTAAAATAACAATTCTAGAAT I L G N M G E - - G K M - L K - Q F - N F W E T W V N N E V K C N - N N N S R I D S G K H G - I M R - N V T K I T I L E . . . . . . 74576 AGTGTCTTACATGTATTGATAATTCTTTCATTTAGAAGTCTTTTTAATGGATGCACAACA S V L H V L I I L S F R S L F N G C T T V S Y M Y - - F F H L E V F L M D A Q H - C L T C I D N S F I - K S F - W M H N . . . . . . 74516 TTAGAACTCTCCTTAATGCTACTTGTCGGACCAAGGAGGTAGATCATAGGAAAAGAACTA L E L S L M L L V G P R R - I I G K E L - N S P - C Y L S D Q G G R S - E K N Y I R T L L N A T C R T K E V D H R K R T . . . . . . 74456 TCAATATATATTTAGTGTATACTATCTAAAAGGCTAGTATTGATTGGTACGAGGTAGTAA S I Y I - C I L S K R L V L I G T R - - Q Y I F S V Y Y L K G - Y - L V R G S N I N I Y L V Y T I - K A S I D W Y E V V . . . . . . 74396 CTTAGTCAAATATCGAATACAATGATTAATATGAGGTAAAGGTAAGAGTTAGTATTGCGG L S Q I S N T M I N M R - R - E L V L R L V K Y R I Q - L I - G K G K S - Y C G T - S N I E Y N D - Y E V K V R V S I A . . . . . . 74336 AGTGAAATTTTCTAGATGCCGGACCAAGGATTTAGAAATACATAACTTATCACTTTGAAT S E I F - M P D Q G F R N T - L I T L N V K F S R C R T K D L E I H N L S L - M E - N F L D A G P R I - K Y I T Y H F E . . . . . . 74276 GCAAGATAATAGGAAAGAATTGTTATAGTTAGAATTATCTAGTTAGGAACTTGTGGGGAA A R - - E R I V I V R I I - L G T C G E Q D N R K E L L - L E L S S - E L V G N C K I I G K N C Y S - N Y L V R N L W G . . . . . . 74216 CACTTAAACCCTAGTTACTTTTATTAATTGATTAAACTACAACATTTGAATTTGTTAGTT H L N P S Y F Y - L I K L Q H L N L L V T - T L V T F I N - L N Y N I - I C - L T L K P - L L L L I D - T T T F E F V S . . . . . . 74156 GTTTACTTTAATTTAGCTAGTTATTTTCATTCATTTAGAAATCAAAACCCCCCGTTTATT V Y F N L A S Y F H S F R N Q N P P F I F T L I - L V I F I H L E I K T P R L L C L L - F S - L F S F I - K S K P P V Y . . . . . . 74096 GTCTTTTTTTCTAAGGAAATAATTGACTTAATAATAATAATAATAAATTAAAGTTAAGTT V F F S K E I I D L I I I I I N - S - V S F F L R K - L T - - - - - - I K V K F C L F F - G N N - L N N N N N K L K L S . 74036 TGA - L Maximal non-overlapping open reading frames (>= 64 codons): none 3-phase translation of AGS-1 (+strand): . . . . . . 74034 TCAAACTTAACTTTAATTTATTATTATTATTATTAAGTCAATTATTTCCTTAGAAAAAAA S N L T L I Y Y Y Y Y - V N Y F L R K K Q T - L - F I I I I I K S I I S L E K K K L N F N L L L L L L S Q L F P - K K . . . . . . 74094 GACAATAAACGGGGGGTTTTGATTTCTAAATGAATGAAAATAACTAGCTAAATTAAAGTA D N K R G V L I S K - M K I T S - I K V T I N G G F - F L N E - K - L A K L K - R Q - T G G F D F - M N E N N - L N - S . . . . . . 74154 AACAACTAACAAATTCAAATGTTGTAGTTTAATCAATTAATAAAAGTAACTAGGGTTTAA N N - Q I Q M L - F N Q L I K V T R V - T T N K F K C C S L I N - - K - L G F K K Q L T N S N V V V - S I N K S N - G L . . . . . . 74214 GTGTTCCCCACAAGTTCCTAACTAGATAATTCTAACTATAACAATTCTTTCCTATTATCT V F P T S S - L D N S N Y N N S F L L S C S P Q V P N - I I L T I T I L S Y Y L S V P H K F L T R - F - L - Q F F P I I . . . . . . 74274 TGCATTCAAAGTGATAAGTTATGTATTTCTAAATCCTTGGTCCGGCATCTAGAAAATTTC C I Q S D K L C I S K S L V R H L E N F A F K V I S Y V F L N P W S G I - K I S L H S K - - V M Y F - I L G P A S R K F . . . . . . 74334 ACTCCGCAATACTAACTCTTACCTTTACCTCATATTAATCATTGTATTCGATATTTGACT T P Q Y - L L P L P H I N H C I R Y L T L R N T N S Y L Y L I L I I V F D I - L H S A I L T L T F T S Y - S L Y S I F D . . . . . . 74394 AAGTTACTACCTCGTACCAATCAATACTAGCCTTTTAGATAGTATACACTAAATATATAT K L L P R T N Q Y - P F R - Y T L N I Y S Y Y L V P I N T S L L D S I H - I Y I - V T T S Y Q S I L A F - I V Y T K Y I . . . . . . 74454 TGATAGTTCTTTTCCTATGATCTACCTCCTTGGTCCGACAAGTAGCATTAAGGAGAGTTC - - F F S Y D L P P W S D K - H - G E F D S S F P M I Y L L G P T S S I K E S S L I V L F L - S T S L V R Q V A L R R V . . . . . . 74514 TAATGTTGTGCATCCATTAAAAAGACTTCTAAATGAAAGAATTATCAATACATGTAAGAC - C C A S I K K T S K - K N Y Q Y M - D N V V H P L K R L L N E R I I N T C K T L M L C I H - K D F - M K E L S I H V R . . . . . . 74574 ACTATTCTAGAATTGTTATTTTAGTTACATTTTACCTCATTATTCACCCATGTTTCCCAG T I L E L L F - L H F T S L F T H V S Q L F - N C Y F S Y I L P H Y S P M F P R H Y S R I V I L V T F Y L I I H P C F P . . . . . . 74634 AATCCTAGTTCTGGAGTTTAGTTACCCATAATCATAATAACAATATTCATATATATGATA N P S S G V - L P I I I I T I F I Y M I I L V L E F S Y P - S - - Q Y S Y I - Y E S - F W S L V T H N H N N N I H I Y D . 74694 TAA - I Maximal non-overlapping open reading frames (>= 64 codons): none PGL 2 (- strand): 76996 76284 AGS-1 (76996 76284) SCR (e 1.000) Exon 1 76996 76284 ( 713 n); score: 1.000 PGS (76996 76284) SGN-E395433- 3-phase translation of AGS-1 (-strand): . . . . . . 76996 CCACATCAACATAGTTGAAGTAAGACATAACGGACCCCATGACAGTTCATCGTAATCACG P H Q H S - S K T - R T P - Q F I V I T H I N I V E V R H N G P H D S S S - S R T S T - L K - D I T D P M T V H R N H . . . . . . 76936 ATGATCCGTCACCTGGTCCATCGTGTTTCACTATTACTGCAGAAAAGTCATTACAGCTTA M I R H L V H R V S L L L Q K S H Y S L - S V T W S I V F H Y Y C R K V I T A - D D P S P G P S C F T I T A E K S L Q L . . . . . . 76876 GCTCTAATATTTATTTTGTGTTTTTTTTATCATCGTGTTTGCTCCTTCTCGTACTAATAT A L I F I L C F F Y H R V C S F S Y - Y L - Y L F C V F F I I V F A P S R T N I S S N I Y F V F F L S S C L L L L V L I . . . . . . 76816 TGATTTTTTATAGGTAGTATCTCTAATGGCACCAAAACAAAATTGAGTTTATGCACGTAG - F F I G S I S N G T K T K L S L C T - D F L - V V S L M A P K Q N - V Y A R R L I F Y R - Y L - W H Q N K I E F M H V . . . . . . 76756 GCGTTCAAAGTCTATCGCCCCGTCCGCCCGACTGGTTATAGGCTTTGATGATGAGCATGA A F K V Y R P V R P T G Y R L - - - A - R S K S I A P S A R L V I G F D D E H D G V Q S L S P R P P D W L - A L M M S M . . . . . . 76696 CCCCAAGTACGTGCCCCCAGGCTATTCCACTCCATCACGATCTGCACGTGCTACTAGAGC P Q V R A P R L F H S I T I C T C Y - S P K Y V P P G Y S T P S R S A R A T R A T P S T C P Q A I P L H H D L H V L L E . . . . . . 76636 TATGCCCAAAAAGGTGGCGTCCAACGTAGTCACTTCCTACAAGTCTGATGAGGAGCACAC Y A Q K G G V Q R S H F L Q V - - G A H M P K K V A S N V V T S Y K S D E E H T L C P K R W R P T - S L P T S L M R S T . . . . . . 76576 ACTAACCGGCACACCTTCTGGGTCAGCTACACATGAATAAGGAGCGTCTGGCTCCTTAGG T N R H T F W V S Y T - I R S V W L L R L T G T P S G S A T H E - G A S G S L G H - P A H L L G Q L H M N K E R L A P - . . . . . . 76516 AGTTTTGTGATCAGAGGAAGCCTCCGGGTCCGCTGAAGTCCCTGCCCCGGCCACATCTGC S F V I R G S L R V R - S P C P G H I C V L - S E E A S G S A E V P A P A T S A E F C D Q R K P P G P L K S L P R P H L . . . . . . 76456 ACAGTCTTTCTCGTTTGATGAGGCTGACAGTCTTGTTCCACTCCAGGCTCAGTGACTAAT T V F L V - - G - Q S C S T P G S V T N Q S F S F D E A D S L V P L Q A Q - L M H S L S R L M R L T V L F H S R L S D - . . . . . . 76396 GCTCTCACCTCGATTGCCAACCAGCGCAACTGATAGTGTGTCGACGAGCAATATCAAGTG A L T S I A N Q R N - - C V D E Q Y Q V L S P R L P T S A T D S V S T S N I K C C S H L D C Q P A Q L I V C R R A I S S . . . . . . 76336 TATTTCGATGCTCAGTTTCTAAATGATAAAGGATTCATGACAAAGACCCGTAC Y F D A Q F L N D K G F M T K T R I S M L S F - M I K D S - Q R P V V F R C S V S K - - R I H D K D P Y Maximal non-overlapping open reading frames (>= 64 codons): >C10HBa0115K16.1-_PGL-2_AGS-1_PPS_1 (76770 76537) (frame '2'; 231 bp, 77 residues) 1 VYARRRSKSI APSARLVIGF DDEHDPKYVP PGYSTPSRSA RATRAMPKKV ASNVVTSYKS 61 DEEHTLTGTP SGSATHE- 3-phase translation of AGS-1 (+strand): . . . . . . 76284 GTACGGGTCTTTGTCATGAATCCTTTATCATTTAGAAACTGAGCATCGAAATACACTTGA V R V F V M N P L S F R N - A S K Y T - Y G S L S - I L Y H L E T E H R N T L D T G L C H E S F I I - K L S I E I H L . . . . . . 76344 TATTGCTCGTCGACACACTATCAGTTGCGCTGGTTGGCAATCGAGGTGAGAGCATTAGTC Y C S S T H Y Q L R W L A I E V R A L V I A R R H T I S C A G W Q S R - E H - S I L L V D T L S V A L V G N R G E S I S . . . . . . 76404 ACTGAGCCTGGAGTGGAACAAGACTGTCAGCCTCATCAAACGAGAAAGACTGTGCAGATG T E P G V E Q D C Q P H Q T R K T V Q M L S L E W N K T V S L I K R E R L C R C H - A W S G T R L S A S S N E K D C A D . . . . . . 76464 TGGCCGGGGCAGGGACTTCAGCGGACCCGGAGGCTTCCTCTGATCACAAAACTCCTAAGG W P G Q G L Q R T R R L P L I T K L L R G R G R D F S G P G G F L - S Q N S - G V A G A G T S A D P E A S S D H K T P K . . . . . . 76524 AGCCAGACGCTCCTTATTCATGTGTAGCTGACCCAGAAGGTGTGCCGGTTAGTGTGTGCT S Q T L L I H V - L T Q K V C R L V C A A R R S L F M C S - P R R C A G - C V L E P D A P Y S C V A D P E G V P V S V C . . . . . . 76584 CCTCATCAGACTTGTAGGAAGTGACTACGTTGGACGCCACCTTTTTGGGCATAGCTCTAG P H Q T C R K - L R W T P P F W A - L - L I R L V G S D Y V G R H L F G H S S S S S S D L - E V T T L D A T F L G I A L . . . . . . 76644 TAGCACGTGCAGATCGTGATGGAGTGGAATAGCCTGGGGGCACGTACTTGGGGTCATGCT - H V Q I V M E W N S L G A R T W G H A S T C R S - W S G I A W G H V L G V M L V A R A D R D G V E - P G G T Y L G S C . . . . . . 76704 CATCATCAAAGCCTATAACCAGTCGGGCGGACGGGGCGATAGACTTTGAACGCCTACGTG H H Q S L - P V G R T G R - T L N A Y V I I K A Y N Q S G G R G D R L - T P T C S S S K P I T S R A D G A I D F E R L R . . . . . . 76764 CATAAACTCAATTTTGTTTTGGTGCCATTAGAGATACTACCTATAAAAAATCAATATTAG H K L N F V L V P L E I L P I K N Q Y - I N S I L F W C H - R Y Y L - K I N I S A - T Q F C F G A I R D T T Y K K S I L . . . . . . 76824 TACGAGAAGGAGCAAACACGATGATAAAAAAAACACAAAATAAATATTAGAGCTAAGCTG Y E K E Q T R - - K K H K I N I R A K L T R R S K H D D K K N T K - I L E L S C V R E G A N T M I K K T Q N K Y - S - A . . . . . . 76884 TAATGACTTTTCTGCAGTAATAGTGAAACACGATGGACCAGGTGACGGATCATCGTGATT - - L F C S N S E T R W T R - R I I V I N D F S A V I V K H D G P G D G S S - L V M T F L Q - - - N T M D Q V T D H R D . . . . . . 76944 ACGATGAACTGTCATGGGGTCCGTTATGTCTTACTTCAACTATGTTGATGTGG T M N C H G V R Y V L L Q L C - C R - T V M G S V M S Y F N Y V D V Y D E L S W G P L C L T S T M L M W Maximal non-overlapping open reading frames (>= 64 codons): >C10HBa0115K16.1+_PGL-2_AGS-1_PPS_1 (76344 76550) (frame '1'; 204 bp, 68 residues) 1 YCSSTHYQLR WLAIEVRALV TEPGVEQDCQ PHQTRKTVQM WPGQGLQRTR RLPLITKLLR 61 SQTLLIHV- PGL 3 (- strand): 80767 79417 AGS-1 (80767 79417) SCR (e 0.897) Exon 1 80767 79417 (1351 n); score: 0.897 PGS (80112 79417) SGN-E395434+ PGS (80111 79625) SGN-E205922+ PGS (80662 79934) SGN-E356787- PGS (80767 80037) SGN-E577717- 3-phase translation of AGS-1 (-strand): . . . . . . 80767 AGAATGTCGTTTGGGTCGTGCAATGCACCGGCCACATTTCAGAGATGTATGATGTCGATA R M S F G S C N A P A T F Q R C M M S I E C R L G R A M H R P H F R D V - C R Y N V V W V V Q C T G H I S E M Y D V D . . . . . . 80707 TTGTCCGACATGGTGAAAGATACTATAGATGTTTTTATGGATGATTTTTCTATGGTTGGT L S D M V K D T I D V F M D D F S M V G C P T W - K I L - M F L W M I F L W L V I V R H G E R Y Y R C F Y G - F F Y G W . . . . . . 80647 GAATCATTCGAGCGTTGTTTGAACAATTTATCTGAGGTCCTTAAGATATGTGAAAACTGC E S F E R C L N N L S E V L K I C E N C N H S S V V - T I Y L R S L R Y V K T A - I I R A L F E Q F I - G P - D M - K L . . . . . . 80587 AATTTAGTACTAAATTAAAAAAAAATACCACTTTATGGTGAAAGAAGGTATTGTTTTAGG N L V L N - K K I P L Y G E R R Y C F R I - Y - I K K K Y H F M V K E G I V L G Q F S T K L K K N T T L W - K K V L F - . . . . . . 80527 TCATTGCATTTCAGAAAAGGGCATAGAGGTTGATCAAGATAAAGGCGAGGTAATAGAGAG S L H F R K G H R G - S R - R R G N R E H C I S E K G I E V D Q D K G E V I E R V I A F Q K R A - R L I K I K A R - - R . . . . . . 80467 ACTTCCCCCACCTATATCTGTAAAGGGTGTGAGAAGCTTTCTTGGGCATGTAGGTTTTTA T S P T Y I C K G C E K L S W A C R F L L P P P I S V K G V R S F L G H V G F Y D F P H L Y L - R V - E A F L G M - V F . . . . . . 80407 CCAGAGATTCTTCAAAGATTTTTCAAAAATTGCACATTCGTTGTGCAAACTGCTGGAGAA P E I L Q R F F K N C T F V V Q T A G E Q R F F K D F S K I A H S L C K L L E K T R D S S K I F Q K L H I R C A N C W R . . . . . . 80347 AGATTGTAAATTTTATTTTGATGAATCCTGTCTTAAAGCATTTGGCGAGCTAAAAGAAAA R L - I L F - - I L S - S I W R A K R K D C K F Y F D E S C L K A F G E L K E K K I V N F I L M N P V L K H L A S - K K . . . . . . 80287 ATTGATGTCTGCACCTATCATTATTTCTCTAGATTGGAACAGTCTATTCGAGGTGATGTG I D V C T Y H Y F S R L E Q S I R G D V L M S A P I I I S L D W N S L F E V M C N - C L H L S L F L - I G T V Y S R - C . . . . . . 80227 CGATGCTAGTGGGGTTGCTCTTGGTGTAGTATTGGGACAAAGAAAGAACAATATCCTTCA R C - W G C S W C S I G T K K E Q Y P S D A S G V A L G V V L G Q R K N N I L H A M L V G L L L V - Y W D K E R T I S F . . . . . . 80167 CCCCATTTACTATGCTAGTAAAGACCTAAATGAAGCTCAGAAGAATTACACAGTGACTGA P H L L C - - R P K - S S E E L H S D - P I Y Y A S K D L N E A Q K N Y T V T E T P F T M L V K T - M K L R R I T Q - L . . . . . . 80107 GCAAGAACTCCTTGCAGTAGTCTTTGCTTTTGAAAAATTTTGCTCTGATTTGCTAGGTAC A R T P C S S L C F - K I L L - F A R Y Q E L L A V V F A F E K F C S D L L G T S K N S L Q - S L L L K N F A L I C - V . . . . . . 80047 TAGAGTTATAGTTCATACTGACCATTCAGCATTGAGATATTTGATGGAAAATAAGGATGT - S Y S S Y - P F S I E I F D G K - G C R V I V H T D H S A L R Y L M E N K D V L E L - F I L T I Q H - D I - W K I R M . . . . . . 79987 GAAACCGAGGTTAATTCGTTAGGTATTACTGCTACACAAATTTGACTTTGAAGTGAGGGA E T E V N S L G I T A T Q I - L - S E G K P R L I R - V L L L H K F D F E V R D - N R G - F V R Y Y C Y T N L T L K - G . . . . . . 79927 TAGAAAAGGAATCAAAAATCAAGTTGCCAATCACTCGTCCTAACTAGAAGATGAATCTAT - K R N Q K S S C Q S L V L T R R - I Y R K G I K N Q V A N H S S - L E D E S M I E K E S K I K L P I T R P N - K M N L . . . . . . 79867 GAGAGATTTAGGGTATAAGTCTGAGCATGTATTGGCTGCCTCACAAGACTTTATTACATG E R F R V - V - A C I G C L T R L Y Y M R D L G Y K S E H V L A A S Q D F I T W - E I - G I S L S M Y W L P H K T L L H . . . . . . 79807 GTTCGCAGATTTCGAGAACTATCTGGCTAGTGATATTATTCCATCGGACTTGTCCTTTCA V R R F R E L S G - - Y Y S I G L V L S F A D F E N Y L A S D I I P S D L S F H G S Q I S R T I W L V I L F H R T C P F . . . . . . 79747 TCAAAGAAAAAAGTTCATGCACGATGTGAAGTTGTTCTATTGGGATGAACCATATTTTTA S K K K V H A R C E V V L L G - T I F L Q R K K F M H D V K L F Y W D E P Y F Y I K E K S S C T M - S C S I G M N H I F . . . . . . 79687 CAGTAGTTGTGCCATAGGGCTTATTCAGTGTTGTGTGCCAGAATGTGAGATGTTGAGTGT Q - L C H R A Y S V L C A R M - D V E C S S C A I G L I Q C C V P E C E M L S V T V V V P - G L F S V V C Q N V R C - V . . . . . . 79627 TTTAGAGGCTTGCCATTCCTCACCCATTGGTGGACATCATAGTGGTATCCGAACCACTCA F R G L P F L T H W W T S - W Y P N H S L E A C H S S P I G G H H S G I R T T H F - R L A I P H P L V D I I V V S E P L . . . . . . 79567 TAAGATATTACAATGTGGTTACTATTGCCCAACTCTTCATCAATATGCTCCTCATTTTGT - D I T M W L L L P N S S S I C S S F C K I L Q C G Y Y C P T L H Q Y A P H F V I R Y Y N V V T I A Q L F I N M L L I L . . . . . . 79507 TAAAGCATGTGATAGATGCCAAAGAGATGAAGGAATTTCAAGAAAGCAAGAGCTCCCTCT - S M - - M P K R - R N F K K A R A P S K A C D R C Q R D E G I S R K Q E L P L L K H V I D A K E M K E F Q E S K S S L . . . . 79447 AAACCCCATTCTTGTGATTGAGTTATTTGAT K P H S C D - V I - N P I L V I E L F D - T P F L - L S Y L Maximal non-overlapping open reading frames (>= 64 codons): >C10HBa0115K16.1-_PGL-3_AGS-1_PPS_1 (80574 79966) (frame '2'; 606 bp, 202 residues) 1 IKKKYHFMVK EGIVLGHCIS EKGIEVDQDK GEVIERLPPP ISVKGVRSFL GHVGFYQRFF 61 KDFSKIAHSL CKLLEKDCKF YFDESCLKAF GELKEKLMSA PIIISLDWNS LFEVMCDASG 121 VALGVVLGQR KNNILHPIYY ASKDLNEAQK NYTVTEQELL AVVFAFEKFC SDLLGTRVIV 181 HTDHSALRYL MENKDVKPRL IR- >C10HBa0115K16.1-_PGL-3_AGS-1_PPS_2 (79884 79417) (frame '2'; 468 bp, 156 residues) 1 LEDESMRDLG YKSEHVLAAS QDFITWFADF ENYLASDIIP SDLSFHQRKK FMHDVKLFYW 61 DEPYFYSSCA IGLIQCCVPE CEMLSVLEAC HSSPIGGHHS GIRTTHKILQ CGYYCPTLHQ 121 YAPHFVKACD RCQRDEGISR KQELPLNPIL VIELFD >C10HBa0115K16.1-_PGL-3_AGS-1_PPS_3 (80767 80570) (frame '1'; 195 bp, 65 residues) 1 RMSFGSCNAP ATFQRCMMSI LSDMVKDTID VFMDDFSMVG ESFERCLNNL SEVLKICENC 61 NLVLN- 3-phase translation of AGS-1 (+strand): . . . . . . 79417 ATCAAATAACTCAATCACAAGAATGGGGTTTAGAGGGAGCTCTTGCTTTCTTGAAATTCC I K - L N H K N G V - R E L L L S - N S S N N S I T R M G F R G S S C F L E I P Q I T Q S Q E W G L E G A L A F L K F . . . . . . 79477 TTCATCTCTTTGGCATCTATCACATGCTTTAACAAAATGAGGAGCATATTGATGAAGAGT F I S L A S I T C F N K M R S I L M K S S S L W H L S H A L T K - G A Y - - R V L H L F G I Y H M L - Q N E E H I D E E . . . . . . 79537 TGGGCAATAGTAACCACATTGTAATATCTTATGAGTGGTTCGGATACCACTATGATGTCC W A I V T T L - Y L M S G S D T T M M S G Q - - P H C N I L - V V R I P L - C P L G N S N H I V I S Y E W F G Y H Y D V . . . . . . 79597 ACCAATGGGTGAGGAATGGCAAGCCTCTAAAACACTCAACATCTCACATTCTGGCACACA T N G - G M A S L - N T Q H L T F W H T P M G E E W Q A S K T L N I S H S G T Q H Q W V R N G K P L K H S T S H I L A H . . . . . . 79657 ACACTGAATAAGCCCTATGGCACAACTACTGTAAAAATATGGTTCATCCCAATAGAACAA T L N K P Y G T T T V K I W F I P I E Q H - I S P M A Q L L - K Y G S S Q - N N N T E - A L W H N Y C K N M V H P N R T . . . . . . 79717 CTTCACATCGTGCATGAACTTTTTTCTTTGATGAAAGGACAAGTCCGATGGAATAATATC L H I V H E L F S L M K G Q V R W N N I F T S C M N F F L - - K D K S D G I I S T S H R A - T F F F D E R T S P M E - Y . . . . . . 79777 ACTAGCCAGATAGTTCTCGAAATCTGCGAACCATGTAATAAAGTCTTGTGAGGCAGCCAA T S Q I V L E I C E P C N K V L - G S Q L A R - F S K S A N H V I K S C E A A N H - P D S S R N L R T M - - S L V R Q P . . . . . . 79837 TACATGCTCAGACTTATACCCTAAATCTCTCATAGATTCATCTTCTAGTTAGGACGAGTG Y M L R L I P - I S H R F I F - L G R V T C S D L Y P K S L I D S S S S - D E - I H A Q T Y T L N L S - I H L L V R T S . . . . . . 79897 ATTGGCAACTTGATTTTTGATTCCTTTTCTATCCCTCACTTCAAAGTCAAATTTGTGTAG I G N L I F D S F S I P H F K V K F V - L A T - F L I P F L S L T S K S N L C S D W Q L D F - F L F Y P S L Q S Q I C V . . . . . . 79957 CAGTAATACCTAACGAATTAACCTCGGTTTCACATCCTTATTTTCCATCAAATATCTCAA Q - Y L T N - P R F H I L I F H Q I S Q S N T - R I N L G F T S L F S I K Y L N A V I P N E L T S V S H P Y F P S N I S . . . . . . 80017 TGCTGAATGGTCAGTATGAACTATAACTCTAGTACCTAGCAAATCAGAGCAAAATTTTTC C - M V S M N Y N S S T - Q I R A K F F A E W S V - T I T L V P S K S E Q N F S M L N G Q Y E L - L - Y L A N Q S K I F . . . . . . 80077 AAAAGCAAAGACTACTGCAAGGAGTTCTTGCTCAGTCACTGTGTAATTCTTCTGAGCTTC K S K D Y C K E F L L S H C V I L L S F K A K T T A R S S C S V T V - F F - A S Q K Q R L L Q G V L A Q S L C N S S E L . . . . . . 80137 ATTTAGGTCTTTACTAGCATAGTAAATGGGGTGAAGGATATTGTTCTTTCTTTGTCCCAA I - V F T S I V N G V K D I V L S L S Q F R S L L A - - M G - R I L F F L C P N H L G L Y - H S K W G E G Y C S F F V P . . . . . . 80197 TACTACACCAAGAGCAACCCCACTAGCATCGCACATCACCTCGAATAGACTGTTCCAATC Y Y T K S N P T S I A H H L E - T V P I T T P R A T P L A S H I T S N R L F Q S I L H Q E Q P H - H R T S P R I D C S N . . . . . . 80257 TAGAGAAATAATGATAGGTGCAGACATCAATTTTTCTTTTAGCTCGCCAAATGCTTTAAG - R N N D R C R H Q F F F - L A K C F K R E I M I G A D I N F S F S S P N A L R L E K - - - V Q T S I F L L A R Q M L - . . . . . . 80317 ACAGGATTCATCAAAATAAAATTTACAATCTTTCTCCAGCAGTTTGCACAACGAATGTGC T G F I K I K F T I F L Q Q F A Q R M C Q D S S K - N L Q S F S S S L H N E C A D R I H Q N K I Y N L S P A V C T T N V . . . . . . 80377 AATTTTTGAAAAATCTTTGAAGAATCTCTGGTAAAAACCTACATGCCCAAGAAAGCTTCT N F - K I F E E S L V K T Y M P K K A S I F E K S L K N L W - K P T C P R K L L Q F L K N L - R I S G K N L H A Q E S F . . . . . . 80437 CACACCCTTTACAGATATAGGTGGGGGAAGTCTCTCTATTACCTCGCCTTTATCTTGATC H T L Y R Y R W G K S L Y Y L A F I L I T P F T D I G G G S L S I T S P L S - S S H P L Q I - V G E V S L L P R L Y L D . . . . . . 80497 AACCTCTATGCCCTTTTCTGAAATGCAATGACCTAAAACAATACCTTCTTTCACCATAAA N L Y A L F - N A M T - N N T F F H H K T S M P F S E M Q - P K T I P S F T I K Q P L C P F L K C N D L K Q Y L L S P - . . . . . . 80557 GTGGTATTTTTTTTTAATTTAGTACTAAATTGCAGTTTTCACATATCTTAAGGACCTCAG V V F F F N L V L N C S F H I S - G P Q W Y F F L I - Y - I A V F T Y L K D L R S G I F F - F S T K L Q F S H I L R T S . . . . . . 80617 ATAAATTGTTCAAACAACGCTCGAATGATTCACCAACCATAGAAAAATCATCCATAAAAA I N C S N N A R M I H Q P - K N H P - K - I V Q T T L E - F T N H R K I I H K N D K L F K Q R S N D S P T I E K S S I K . . . . . . 80677 CATCTATAGTATCTTTCACCATGTCGGACAATATCGACATCATACATCTCTGAAATGTGG H L - Y L S P C R T I S T S Y I S E M W I Y S I F H H V G Q Y R H H T S L K C G T S I V S F T M S D N I D I I H L - N V . . . . 80737 CCGGTGCATTGCACGACCCAAACGACATTCT P V H C T T Q T T F R C I A R P K R H S A G A L H D P N D I Maximal non-overlapping open reading frames (>= 64 codons): >C10HBa0115K16.1+_PGL-3_AGS-1_PPS_1 (79627 79827) (frame '1'; 198 bp, 66 residues) 1 NTQHLTFWHT TLNKPYGTTT VKIWFIPIEQ LHIVHELFSL MKGQVRWNNI TSQIVLEICE 61 PCNKVL- PGL 4 (+ strand): 84174 86623 AGS-1 (84174 85676,86587 86623) SCR (e 0.810 d 0.000 a 0.000,e 0.730) Exon 1 84174 85676 (1503 n); score: 0.810 Intron 1 85677 86586 ( 910 n); Pd: 0.000 Pa: 0.000 Exon 2 86587 86623 ( 37 n); score: 0.730 PGS (84174 84856) SGN-E241731+ PGS (84738 85482) SGN-E349968- PGS (85171 85676,86587 86623) SGN-E352282+ 3-phase translation of AGS-1 (+strand): . . . . . . 84174 TCAGACTTAACTTTAATCTATTACTATTATTTAGTCAATTATTTCCATAGAAAACAAAGA S D L T L I Y Y Y Y L V N Y F H R K Q R Q T - L - S I T I I - S I I S I E N K D R L N F N L L L L F S Q L F P - K T K . . . . . . 84234 CAATAAAAGGGAGGGTTTTGTTTCTAAATGAATGAAAATAACTAAGTAAAGTAAAGTAAA Q - K G G F C F - M N E N N - V K - S K N K R E G F V S K - M K I T K - S K V K T I K G R V L F L N E - K - L S K V K - . . . . . . 84294 AAACTTACAGATTTAAATGTTGGAGTTTAATCAATTGATAAAAGTAACTAGGGTTAAAGT K L T D L N V G V - S I D K S N - G - S N L Q I - M L E F N Q L I K V T R V K V K T Y R F K C W S L I N - - K - L G L K . . . . . . 84354 GTTTCCCACAAGTTCCTAACTTGATAATTCTAACTATAACAACTCTTTCCTAGTACCTTG V S H K F L T - - F - L - Q L F P S T L F P T S S - L D N S N Y N N S F L V P C C F P Q V P N L I I L T I T T L S - Y L . . . . . . 84414 CATGCAAAATGATAAGTTATGGATTTCTAAATCCTTAGTCTAGCATCTAGAAAATTCCAC H A K - - V M D F - I L S L A S R K F H M Q N D K L W I S K S L V - H L E N S T A C K M I S Y G F L N P - S S I - K I P . . . . . . 84474 TCCGCCCTTGGTACGTCTACGTATGTTGCTATACTAACCCTTACCTTTACCTCATATTAA S A L G T S T Y V A I L T L T F T S Y - P P L V R L R M L L Y - P L P L P H I K L R P W Y V Y V C C Y T N P Y L Y L I L . . . . . . 84534 GCATCGTATTCAATATTTGACTATGTTATTACCTCGTACCAATCAATACTAGCCTATTAG A S Y S I F D Y V I T S Y Q S I L A Y - H R I Q Y L T M L L P R T N Q Y - P I R S I V F N I - L C Y Y L V P I N T S L L . . . . . . 84594 ATAGGATACACTATGTTGATAATTATTTTCCTATTATCTATTTCCTTGGTCCGGAAAGTA I G Y T M L I I I F L L S I S L V R K V - D T L C - - L F S Y Y L F P W S G K - D R I H Y V D N Y F P I I Y F L G P E S . . . . . . 84654 GCATTAAGGTGAGTTCTAACGTTGGCCATCCGTTAAAAAGACTTCTAAGCGAAAGAATTA A L R - V L T L A I R - K D F - A K E L H - G E F - R W P S V K K T S K R K N Y S I K V S S N V G H P L K R L L S E R I . . . . . . 84714 TCAATATATGGAAGACGCTGTTCTAGAATTGTTATTTTAGTTAGATTTTACTTCATTATT S I Y G R R C S R I V I L V R F Y F I I Q Y M E D A V L E L L F - L D F T S L F I N I W K T L F - N C Y F S - I L L H Y . . . . . . 84774 TACCCATGGTTCCCACAACCCTAGTTATGGAGTTTAGTTACCCATATTTATAATCACAAT Y P W F P Q P - L W S L V T H I Y N H N T H G S H N P S Y G V - L P I F I I T I L P M V P T T L V M E F S Y P Y L - S Q . . . . . . 84834 ATTAATATATGTAATATAAGAATTCATGCACTTACTTCAATGAGAAAGAATAAAATCCAG I N I C N I R I H A L T S M R K N K I Q L I Y V I - E F M H L L Q - E R I K S R Y - Y M - Y K N S C T Y F N E K E - N P . . . . . . 84894 AAGTTCACTTGATTAATTAACAAACGCACCAACAATAAATTCAAGAAAAAGTGTATCAAT K F T - L I N K R T N N K F K K K C I N S S L D - L T N A P T I N S R K S V S I E V H L I N - Q T H Q Q - I Q E K V Y Q . . . . . . 84954 TACTGAAATTAATCGAGGAGTAAAGATTCTCCAAAAGTATAACAATCACAAAGAAAAATA Y - N - S R S K D S P K V - Q S Q R K I T E I N R G V K I L Q K Y N N H K E K Y L L K L I E E - R F S K S I T I T K K N . . . . . . 85014 TCCAAGAGTATACTAACAAAGAGTCTAACCGCAAAAACGAGGTTTTTCCAACTATTTATA S K S I L T K S L T A K T R F F Q L F I P R V Y - Q R V - P Q K R G F S N Y L - I Q E Y T N K E S N R K N E V F P T I Y . . . . . . 85074 AAAAAACAAAAACCTAATAAAAGATGGACTCTAATTGCTGAAAATCAGTCAAAACGTGTT K K Q K P N K R W T L I A E N Q S K R V K N K N L I K D G L - L L K I S Q N V F K K T K T - - K M D S N C - K S V K T C . . . . . . 85134 CGAGTCGACGGACATCGTGACGGGCCGTCATTGTCATGACAGGACGTCATGGCCTCCGTT R V D G H R D G P S L S - Q D V M A S V E S T D I V T G R H C H D R T S W P P L S S R R T S - R A V I V M T G R H G L R . . . . . . 85194 ATCCTATGCTTCACAAATCCTTCTACTGATTTTTTCATTACCCTCGACAAACAGGTATGA I L C F T N P S T D F F I T L D K Q V - S Y A S Q I L L L I F S L P S T N R Y D Y P M L H K S F Y - F F H Y P R Q T G M . . . . . . 85254 CGAACCATTCCAAGCACGACGGTCGGTCGAGGGTCTCCGTTCCATAACACTTAAACTTTT R T I P S T T V G R G S P F H N T - T F E P F Q A R R S V E G L R S I T L K L F T N H S K H D G R S R V S V P - H L N F . . . . . . 85314 TGGAATTTGGGTACTGGGAGTACTCTCTGATCATCATGATGAACCAGTAGGATGGACTGT W N L G T G S T L - S S - - T S R M D C G I W V L G V L S D H H D E P V G W T V L E F G Y W E Y S L I I M M N Q - D G L . . . . . . 85374 CGTGGCTATGACCGTCCGTCATGAACTTTGTAATCCCACACTTAGGTCAGTCTTCCCTAT R G Y D R P S - T L - S H T - V S L P Y V A M T V R H E L C N P T L R S V F P I S W L - P S V M N F V I P H L G Q S S L . . . . . . 85434 CTTCCTTCAGCAGCTTCATTACGATGCCACCTACGGGCCGTCACAAGCTCGATGAACCGT L P S A A S L R C H L R A V T S S M N R F L Q Q L H Y D A T Y G P S Q A R - T V S S F S S F I T M P P T G R H K L D E P . . . . . . 85494 CACAGGCCCTGTAGGAGGGTAACTTTTCTGCATTTCTTGCTCAAAAACTTTTGCGTTCAC H R P C R R V T F L H F L L K N F C V H T G P V G G - L F C I S C S K T F A F T S Q A L - E G N F S A F L A Q K L L R S . . . . . . 85554 CTTTAGACAGATTTCCTTCAAATAAAGACAAACTTACATAAAAATCAATACAAAAAGGCT L - T D F L Q I K T N L H K N Q Y K K A F R Q I S F K - R Q T Y I K I N T K R L P L D R F P S N K D K L T - K S I Q K G . . . . . . 85614 TTTGGACACACACTAAACTTAGGGAAAGAGCATTAAAAATATCGTGAAACCACAGTATAT F G H T L N L G K E H - K Y R E T T V Y L D T H - T - G K S I K N I V K P Q Y I F W T H T K L R E R A L K I S - N H S I . : . . . 85674 CAA : CACCTCTCACCCTAAGTTTGTGATACCTTGACCTCAA Q : H L S P - V C D T L T S N : T S H P K F V I P - P Q S : T P L T L S L - Y L D L Maximal non-overlapping open reading frames (>= 64 codons): >C10HBa0115K16.1+_PGL-4_AGS-1_PPS_1 (85108 85488) (frame '2'; 378 bp, 126 residues) 1 LLKISQNVFE STDIVTGRHC HDRTSWPPLS YASQILLLIF SLPSTNRYDE PFQARRSVEG 61 LRSITLKLFG IWVLGVLSDH HDEPVGWTVV AMTVRHELCN PTLRSVFPIF LQQLHYDATY 121 GPSQAR- PGL 5 (+ strand): 92662 92946 AGS-1 (92662 92946) SCR (e 0.796) Exon 1 92662 92946 ( 285 n); score: 0.796 PGS (92662 92946) SGN-E252199+ 3-phase translation of AGS-1 (+strand): . . . . . . 92662 CCTTGTAACGACCCGTTTAGTCATTTTGAGCGGCAGACTTTATTTCTGGAAAAACTGGCA P C N D P F S H F E R Q T L F L E K L A L V T T R L V I L S G R L Y F W K N W Q L - R P V - S F - A A D F I S G K T G . . . . . . 92722 GAAGCGACGAACCCCATGACGGACCGTCATGGGCACGACGGACTGTCGCAGGGTCTCATT E A T N P M T D R H G H D G L S Q G L I K R R T P - R T V M G T T D C R R V S F R S D E P H D G P S W A R R T V A G S H . . . . . . 92782 TCAAAACACTTAGAAAATCTGAAATTGGGTACTAAAAATCGACTCTCTGAACTTTGTGAC S K H L E N L K L G T K N R L S E L C D Q N T - K I - N W V L K I D S L N F V T F K T L R K S E I G Y - K S T L - T L - . . . . . . 92842 GGAATGGAAGGACGGACCGTCACAGGTGTGACGGACCGTCACAGACCCTTGGTGGAAATT G M E G R T V T G V T D R H R P L V E I E W K D G P S Q V - R T V T D P W W K F R N G R T D R H R C D G P S Q T L G G N . . . . . 92902 TGGGTCTCTGAACTCTACGACGACCTGCAGGACGGACCGTCGCAG W V S E L Y D D L Q D G P S Q G S L N S T T T C R T D R R L G L - T L R R P A G R T V A Maximal non-overlapping open reading frames (>= 64 codons): >C10HBa0115K16.1+_PGL-5_AGS-1_PPS_1 (92662 92946) (frame '1'; 285 bp, 95 residues) 1 PCNDPFSHFE RQTLFLEKLA EATNPMTDRH GHDGLSQGLI SKHLENLKLG TKNRLSELCD 61 GMEGRTVTGV TDRHRPLVEI WVSELYDDLQ DGPSQ 3-phase translation of AGS-1 (-strand): . . . . . . 92946 CTGCGACGGTCCGTCCTGCAGGTCGTCGTAGAGTTCAGAGACCCAAATTTCCACCAAGGG L R R S V L Q V V V E F R D P N F H Q G C D G P S C R S S - S S E T Q I S T K G A T V R P A G R R R V Q R P K F P P R . . . . . . 92886 TCTGTGACGGTCCGTCACACCTGTGACGGTCCGTCCTTCCATTCCGTCACAAAGTTCAGA S V T V R H T C D G P S F H S V T K F R L - R S V T P V T V R P S I P S Q S S E V C D G P S H L - R S V L P F R H K V Q . . . . . . 92826 GAGTCGATTTTTAGTACCCAATTTCAGATTTTCTAAGTGTTTTGAAATGAGACCCTGCGA E S I F S T Q F Q I F - V F - N E T L R S R F L V P N F R F S K C F E M R P C D R V D F - Y P I S D F L S V L K - D P A . . . . . . 92766 CAGTCCGTCGTGCCCATGACGGTCCGTCATGGGGTTCGTCGCTTCTGCCAGTTTTTCCAG Q S V V P M T V R H G V R R F C Q F F Q S P S C P - R S V M G F V A S A S F S R T V R R A H D G P S W G S S L L P V F P . . . . . 92706 AAATAAAGTCTGCCGCTCAAAATGACTAAACGGGTCGTTACAAGG K - S L P L K M T K R V V T R N K V C R S K - L N G S L Q E I K S A A Q N D - T G R Y K Maximal non-overlapping open reading frames (>= 64 codons): none PGL 6 (- strand): 97075 92665 AGS-1 (94886 92665) SCR (e 0.917) Exon 1 94886 92665 (2222 n); score: 0.917 PGS (93219 92665) SGN-E550212+ PGS (93219 92665) SGN-E550065+ PGS (93219 92665) SGN-E550201+ PGS (93219 92665) SGN-E550207+ PGS (93219 92665) SGN-E550335+ PGS (93219 92665) SGN-E390013+ PGS (93219 92665) SGN-E389834+ PGS (93219 92665) SGN-E550484+ PGS (93219 92665) SGN-E550211+ PGS (93219 92665) SGN-E550464+ PGS (93219 92665) SGN-E549941+ PGS (93219 92665) SGN-E550025+ PGS (93219 92665) SGN-E231589+ PGS (93219 92665) SGN-E374999+ PGS (93219 92665) SGN-E396039+ PGS (93219 92665) SGN-E396054+ PGS (93219 92665) SGN-E396056+ PGS (93219 92665) SGN-E396058+ PGS (93219 92665) SGN-E377133+ PGS (93219 92665) SGN-E389553- PGS (93219 92665) SGN-E550127- PGS (93219 92665) SGN-E550140- PGS (93198 92665) SGN-E550322+ PGS (93186 92665) SGN-E396057- PGS (93167 92665) SGN-E377132- PGS (93154 92665) SGN-E396055- PGS (93152 92665) SGN-E398551- PGS (93142 92665) SGN-E396038- PGS (93036 92665) SGN-E396069- PGS (93029 92665) SGN-E374998- PGS (92791 92665) SGN-E356257+ PGS (93219 92676) SGN-E241959+ PGS (93251 92710) SGN-E349296- PGS (93219 92748) SGN-E236652+ PGS (93219 92767) SGN-E396070+ PGS (93175 92784) SGN-E356257- PGS (93788 93178) SGN-E347579- PGS (93910 93269) SGN-E349726- PGS (93668 93269) SGN-E357559- PGS (93465 93348) SGN-E349977- PGS (94120 93785) SGN-E357033+ PGS (94031 93795) SGN-E391780- PGS (94272 93796) SGN-E246710- PGS (94416 93820) SGN-E546506+ PGS (94828 94098) SGN-E351546- PGS (94753 94098) SGN-E356696- PGS (94677 94098) SGN-E356206- PGS (94456 94169) SGN-E222578+ PGS (94845 94179) SGN-E392027+ PGS (94582 94180) SGN-E370357+ PGS (94409 94209) SGN-E216150+ PGS (94886 94600) SGN-E355114- 3-phase translation of AGS-1 (-strand): . . . . . . 94886 CCACAACCCCAGTGGCTGGCTCCGTTGTTTCTTGTCTGGCCGGTGTTGGTGTTGACGTAG P Q P Q W L A P L F L V W P V L V L T - H N P S G W L R C F L S G R C W C - R S T T P V A G S V V S C L A G V G V D V . . . . . . 94826 TCGTTGCTCTAGTTCTAACCATCTGCGAAAGAGAGTGAAGATGGTCAGATACCAATTCGT S L L - F - P S A K E S E D G Q I P I R R C S S S N H L R K R V K M V R Y Q F V V V A L V L T I C E R E - R W S D T N S . . . . . . 94766 ATCGCCTAGATACCAATTGGACTCAAGTAGTAGCATAAAAGAAAGAATGAAAGAGTGAAA I A - I P I G L K - - H K R K N E R V K S P R Y Q L D S S S S I K E R M K E - N Y R L D T N W T Q V V A - K K E - K S E . . . . . . 94706 TTTTTCCGAAAGTCTTATAGCCTCTCAAGGAAAAGTAAAGGCGTCCCCCTACCGTTCCTT F F R K S Y S L S R K S K G V P L P F L F S E S L I A S Q G K V K A S P Y R S L I F P K V L - P L K E K - R R P P T V P . . . . . . 94646 AAGACTCTACTAGACCTGTTCTTGTGTGATGAGACCAACGAACCTAAGGCTCTGATACCA K T L L D L F L C D E T N E P K A L I P R L Y - T C S C V M R P T N L R L - Y Q - D S T R P V L V - - D Q R T - G S D T . . . . . . 94586 AGTTTGTCACGACCCAAACCGGGTTGCGACTGGCACCCACACTTACCCTCCTATGTGAGC S L S R P K P G C D W H P H L P S Y V S V C H D P N R V A T G T H T Y P P M - A K F V T T Q T G L R L A P T L T L L C E . . . . . . 94526 GAACCAACCGATCTAAACCTTAACATTTCTATGTAATAACAACAGAAAGTAATGCGGAAC E P T D L N L N I S M - - Q Q K V M R N N Q P I - T L T F L C N N N R K - C G T R T N R S K P - H F Y V I T T E S N A E . . . . . . 94466 ACTTAACTCATTAATAAAAACCAATTCAATAACTATCAATATTCAACATCTATTATTCCC T - L I N K N Q F N N Y Q Y S T S I I P L N S L I K T N S I T I N I Q H L L F P H L T H - - K P I Q - L S I F N I Y Y S . . . . . . 94406 AAAACCTGGAAGTCATCATCACAAGAACATCTACGATCAAATGACTAAACTAAGAGTATT K T W K S S S Q E H L R S N D - T K S I K P G S H H H K N I Y D Q M T K L R V F Q N L E V I I T R T S T I K - L N - E Y . . . . . . 94346 CTAAAAGCTAAAAATACATCAGAAGCTAGTCCATGCCAGAAGTTCAAGGCATCAAGACTT L K A K N T S E A S P C Q K F K A S R L - K L K I H Q K L V H A R S S R H Q D L S K S - K Y I R S - S M P E V Q G I K T . . . . . . 94286 GAAGAAGGAGATCCAGTCCAAGCTAGAAGCATTAGCTCACCCTGAATTTCCGATGTGGTA E E G D P V Q A R S I S S P - I S D V V K K E I Q S K L E A L A H P E F P M W - - R R R S S P S - K H - L T L N F R C G . . . . . . 94226 AGACTGGCTTGAATTACTGTTGAGTTGAAGACGATGGCACGTTTGCTGCACTCCACAAAT R L A - I T V E L K T M A R L L H S T N D W L E L L L S - R R W H V C C T P Q I K T G L N Y C - V E D D G T F A A L H K . . . . . . 94166 AAACAAGAAGAAAACATAAAAGTAGGGGTTAGTACAAAACACGGGTACTCAGTAGATATC K Q E E N I K V G V S T K H G Y S V D I N K K K T - K - G L V Q N T G T Q - I S - T R R K H K S R G - Y K T R V L S R Y . . . . . . 94106 ATCGGCCAACTCAAAATAGGGGACAGTATATATCAATATTATCGTAAATCAACTATAAAA I G Q L K I G D S I Y Q Y Y R K S T I K S A N S K - G T V Y I N I I V N Q L - N H R P T Q N R G Q Y I S I L S - I N Y K . . . . . . 94046 CTCAACATGTAGCCACAACAAGTATTATAATCATCAATAAGTACCATCAAGTTCATCCAT L N M - P Q Q V L - S S I S T I K F I H S T C S H N K Y Y N H Q - V P S S S S M T Q H V A T T S I I I I N K Y H Q V H P . . . . . . 93986 GAGGGCTCAAGCCTTAACACCATACTCATTTGGGAATTATGTTCGTTAGATTGAGTATAT E G S S L N T I L I W E L C S L D - V Y R A Q A L T P Y S F G N Y V R - I E Y I - G L K P - H H T H L G I M F V R L S I . . . . . . 93926 TAACATCTTTCAAGATTCATTATCTTTAATTCTCTTGTGTCGGTACGTGACACTTCGATC - H L S R F I I F N S L V S V R D T S I N I F Q D S L S L I L L C R Y V T L R S L T S F K I H Y L - F S C V G T - H F D . . . . . . 93866 CCTCATATTCATTATTCCTCTTGTGTCGGTACGTGACACTCCGATCCCCTATATCTACGT P H I H Y S S C V G T - H S D P L Y L R L I F I I P L V S V R D T P I P Y I Y V P S Y S L F L L C R Y V T L R S P I S T . . . . . . 93806 GTCGGTTCGTGACACCCGATCCCCTAATTCTACGTGTCGGTTCGTGACACCCGATCCCCT V G S - H P I P - F Y V S V R D T R S P S V R D T R S P N S T C R F V T P D P L C R F V T P D P L I L R V G S - H P I P . . . . . . 93746 AATTCTACGTGTCGGTTCGTGACACCCGATCCCCTAATTCTACGTGTCGGTTCGTGACAC N S T C R F V T P D P L I L R V G S - H I L R V G S - H P I P - F Y V S V R D T - F Y V S V R D T R S P N S T C R F V T . . . . . . 93686 CCGATCCCCTAATTCTACGTGTCGGTTCGTGACACCCGATCCCCTAATTCTACGTGTCGG P I P - F Y V S V R D T R S P N S T C R R S P N S T C R F V T P D P L I L R V G P D P L I L R V G S - H P I P - F Y V S . . . . . . 93626 TTCGTGACACCCGATCCCCTAATTCTACATGTCGGTTCGTGACACCCGATCCCCTATATC F V T P D P L I L H V G S - H P I P Y I S - H P I P - F Y M S V R D T R S P I S V R D T R S P N S T C R F V T P D P L Y . . . . . . 93566 ATTCTGTAAATCATCAGGCCTTCTCTATACCAAGGCATCATCAATCCCATTAATTTAATT I L - I I R P S L Y Q G I I N P I N L I F C K S S G L L Y T K A S S I P L I - F H S V N H Q A F S I P R H H Q S H - F N . . . . . . 93506 CATAAAGCCTTCTTCTATACCAAAGCATCATCATTAATAATGTATATTAAAGTTTCCTTT H K A F F Y T K A S S L I M Y I K V S F I K P S S I P K H H H - - C I L K F P F S - S L L L Y Q S I I I N N V Y - S F L . . . . . . 93446 CAAGATTTGGGATTCAATATTTTCATCATGCTTATCTTATCACAATCACATAATCATATT Q D L G F N I F I M L I L S Q S H N H I K I W D S I F S S C L S Y H N H I I I F S R F G I Q Y F H H A Y L I T I T - S Y . . . . . . 93386 CACGCAAACATAAAATTAAGCATATAGTAGGGTTTACAATACTACCAATACATATCATTC H A N I K L S I - - G L Q Y Y Q Y I S F T Q T - N - A Y S R V Y N T T N T Y H S S R K H K I K H I V G F T I L P I H I I . . . . . . 93326 TCTATTAAGAGTTTACTATGAAAGTATGAAAACCATAACCAACCTCCACCGAAGATTAGT S I K S L L - K Y E N H N Q P P P K I S L L R V Y Y E S M K T I T N L H R R L V L Y - E F T M K V - K P - P T S T E D - . . . . . . 93266 GATCAAGCAAGCAAATTTTTCTTCAAGCTTTGTTTCTCCCTTCTCGTTCGATTCTCCCTC D Q A S K F F F K L C F S L L V R F S L I K Q A N F S S S F V S P F S F D S P S - S S K Q I F L Q A L F L P S R S I L P . . . . . . 93206 TCTCTCTTGTTCTTTCTATTTTCTTTATTCCAACCCTATTTCTTTTACCCTAATTAGTAT S L L F F L F S L F Q P Y F F Y P N - Y L S C S F Y F L Y S N P I S F T L I S I L S L V L S I F F I P T L F L L P - L V . . . . . . 93146 ATAATTAAGAATAAAAGATGGCAATAATACCCCACTAATTAACTTAGGGTTACCTCTTTT I I K N K R W Q - Y P T N - L R V T S F - L R I K D G N N T P L I N L G L P L L Y N - E - K M A I I P H - L T - G Y L F . . . . . . 93086 AACCCCTCAAGAATTTGAGTTATTAATATAAACCCACGAACTTTATAATTAAGGCAAGAA N P S R I - V I N I N P R T L - L R Q E T P Q E F E L L I - T H E L Y N - G K N - P L K N L S Y - Y K P T N F I I K A R . . . . . . 93026 TAGTCAAAAACGTCCCTTAAAACTTAACCAGAAATCCGACTCTGCCTGGGATTTGCACAA - S K T S L K T - P E I R L C L G F A Q S Q K R P L K L N Q K S D S A W D L H N I V K N V P - N L T R N P T L P G I C T . . . . . . 92966 CCTGTGACGGGCCGTCGTGCCTGCGACGGTCCGTCCTGCAGGTCGTCGTAGAGTTCAGAG P V T G R R A C D G P S C R S S - S S E L - R A V V P A T V R P A G R R R V Q R T C D G P S C L R R S V L Q V V V E F R . . . . . . 92906 ACCCAAATTTCCACCAAGGGTCTGTGACGGTCCGTCACACCTGTGACGGTCCGTCCTTCC T Q I S T K G L - R S V T P V T V R P S P K F P P R V C D G P S H L - R S V L P D P N F H Q G S V T V R H T C D G P S F . . . . . . 92846 ATTCCGTCACAAAGTTCAGAGAGTCGATTTTTAGTACCCAATTTCAGATTTTCTAAGTGT I P S Q S S E S R F L V P N F R F S K C F R H K V Q R V D F - Y P I S D F L S V H S V T K F R E S I F S T Q F Q I F - V . . . . . . 92786 TTTGAAATGAGACCCTGCGACAGTCCGTCGTGCCCATGACGGTCCGTCATGGGGTTCGTC F E M R P C D S P S C P - R S V M G F V L K - D P A T V R R A H D G P S W G S S F - N E T L R Q S V V P M T V R H G V R . . . . . . 92726 GCTTCTGCCAGTTTTTCCAGAAATAAAGTCTGCCGCTCAAAATGACTAAACGGGTCGTTA A S A S F S R N K V C R S K - L N G S L L L P V F P E I K S A A Q N D - T G R Y R F C Q F F Q K - S L P L K M T K R V V . 92666 CA T Maximal non-overlapping open reading frames (>= 64 codons): >C10HBa0115K16.1-_PGL-6_AGS-1_PPS_1 (94733 94491) (frame '1'; 240 bp, 80 residues) 1 HKRKNERVKF FRKSYSLSRK SKGVPLPFLK TLLDLFLCDE TNEPKALIPS LSRPKPGCDW 61 HPHLPSYVSE PTDLNLNISM - >C10HBa0115K16.1-_PGL-6_AGS-1_PPS_2 (93367 93143) (frame '2'; 222 bp, 74 residues) 1 AYSRVYNTTN TYHSLLRVYY ESMKTITNLH RRLVIKQANF SSSFVSPFSF DSPSLSCSFY 61 FLYSNPISFT LISI- >C10HBa0115K16.1-_PGL-6_AGS-1_PPS_3 (93006 92791) (frame '0'; 213 bp, 71 residues) 1 NLTRNPTLPG ICTTCDGPSC LRRSVLQVVV EFRDPNFHQG SVTVRHTCDG PSFHSVTKFR 61 ESIFSTQFQI F- >C10HBa0115K16.1-_PGL-6_AGS-1_PPS_4 (93937 93725) (frame '2'; 210 bp, 70 residues) 1 IEYINIFQDS LSLILLCRYV TLRSLIFIIP LVSVRDTPIP YIYVSVRDTR SPNSTCRFVT 61 PDPLILRVGS - >C10HBa0115K16.1-_PGL-6_AGS-1_PPS_5 (93557 93360) (frame '1'; 195 bp, 65 residues) 1 IIRPSLYQGI INPINLIHKA FFYTKASSLI MYIKVSFQDL GFNIFIMLIL SQSHNHIHAN 61 IKLSI- 3-phase translation of AGS-1 (+strand): . . . . . . 92665 TGTAACGACCCGTTTAGTCATTTTGAGCGGCAGACTTTATTTCTGGAAAAACTGGCAGAA C N D P F S H F E R Q T L F L E K L A E V T T R L V I L S G R L Y F W K N W Q K - R P V - S F - A A D F I S G K T G R . . . . . . 92725 GCGACGAACCCCATGACGGACCGTCATGGGCACGACGGACTGTCGCAGGGTCTCATTTCA A T N P M T D R H G H D G L S Q G L I S R R T P - R T V M G T T D C R R V S F Q S D E P H D G P S W A R R T V A G S H F . . . . . . 92785 AAACACTTAGAAAATCTGAAATTGGGTACTAAAAATCGACTCTCTGAACTTTGTGACGGA K H L E N L K L G T K N R L S E L C D G N T - K I - N W V L K I D S L N F V T E K T L R K S E I G Y - K S T L - T L - R . . . . . . 92845 ATGGAAGGACGGACCGTCACAGGTGTGACGGACCGTCACAGACCCTTGGTGGAAATTTGG M E G R T V T G V T D R H R P L V E I W W K D G P S Q V - R T V T D P W W K F G N G R T D R H R C D G P S Q T L G G N L . . . . . . 92905 GTCTCTGAACTCTACGACGACCTGCAGGACGGACCGTCGCAGGCACGACGGCCCGTCACA V S E L Y D D L Q D G P S Q A R R P V T S L N S T T T C R T D R R R H D G P S Q G L - T L R R P A G R T V A G T T A R H . . . . . . 92965 GGTTGTGCAAATCCCAGGCAGAGTCGGATTTCTGGTTAAGTTTTAAGGGACGTTTTTGAC G C A N P R Q S R I S G - V L R D V F D V V Q I P G R V G F L V K F - G T F L T R L C K S Q A E S D F W L S F K G R F - . . . . . . 93025 TATTCTTGCCTTAATTATAAAGTTCGTGGGTTTATATTAATAACTCAAATTCTTGAGGGG Y S C L N Y K V R G F I L I T Q I L E G I L A L I I K F V G L Y - - L K F L R G L F L P - L - S S W V Y I N N S N S - G . . . . . . 93085 TTAAAAGAGGTAACCCTAAGTTAATTAGTGGGGTATTATTGCCATCTTTTATTCTTAATT L K E V T L S - L V G Y Y C H L L F L I - K R - P - V N - W G I I A I F Y S - L V K R G N P K L I S G V L L P S F I L N . . . . . . 93145 ATATACTAATTAGGGTAAAAGAAATAGGGTTGGAATAAAGAAAATAGAAAGAACAAGAGA I Y - L G - K K - G W N K E N R K N K R Y T N - G K R N R V G I K K I E R T R E Y I L I R V K E I G L E - R K - K E Q E . . . . . . 93205 GAGAGGGAGAATCGAACGAGAAGGGAGAAACAAAGCTTGAAGAAAAATTTGCTTGCTTGA E R E N R T R R E K Q S L K K N L L A - R G R I E R E G R N K A - R K I C L L D R E G E S N E K G E T K L E E K F A C L . . . . . . 93265 TCACTAATCTTCGGTGGAGGTTGGTTATGGTTTTCATACTTTCATAGTAAACTCTTAATA S L I F G G G W L W F S Y F H S K L L I H - S S V E V G Y G F H T F I V N S - - I T N L R W R L V M V F I L S - - T L N . . . . . . 93325 GAGAATGATATGTATTGGTAGTATTGTAAACCCTACTATATGCTTAATTTTATGTTTGCG E N D M Y W - Y C K P Y Y M L N F M F A R M I C I G S I V N P T I C L I L C L R R E - Y V L V V L - T L L Y A - F Y V C . . . . . . 93385 TGAATATGATTATGTGATTGTGATAAGATAAGCATGATGAAAATATTGAATCCCAAATCT - I - L C D C D K I S M M K I L N P K S E Y D Y V I V I R - A - - K Y - I P N L V N M I M - L - - D K H D E N I E S Q I . . . . . . 93445 TGAAAGGAAACTTTAATATACATTATTAATGATGATGCTTTGGTATAGAAGAAGGCTTTA - K E T L I Y I I N D D A L V - K K A L E R K L - Y T L L M M M L W Y R R R L Y L K G N F N I H Y - - - C F G I E E G F . . . . . . 93505 TGAATTAAATTAATGGGATTGATGATGCCTTGGTATAGAGAAGGCCTGATGATTTACAGA - I K L M G L M M P W Y R E G L M I Y R E L N - W D - - C L G I E K A - - F T E M N - I N G I D D A L V - R R P D D L Q . . . . . . 93565 ATGATATAGGGGATCGGGTGTCACGAACCGACATGTAGAATTAGGGGATCGGGTGTCACG M I - G I G C H E P T C R I R G S G V T - Y R G S G V T N R H V E L G D R V S R N D I G D R V S R T D M - N - G I G C H . . . . . . 93625 AACCGACACGTAGAATTAGGGGATCGGGTGTCACGAACCGACACGTAGAATTAGGGGATC N R H V E L G D R V S R T D T - N - G I T D T - N - G I G C H E P T R R I R G S E P T R R I R G S G V T N R H V E L G D . . . . . . 93685 GGGTGTCACGAACCGACACGTAGAATTAGGGGATCGGGTGTCACGAACCGACACGTAGAA G C H E P T R R I R G S G V T N R H V E G V T N R H V E L G D R V S R T D T - N R V S R T D T - N - G I G C H E P T R R . . . . . . 93745 TTAGGGGATCGGGTGTCACGAACCGACACGTAGAATTAGGGGATCGGGTGTCACGAACCG L G D R V S R T D T - N - G I G C H E P - G I G C H E P T R R I R G S G V T N R I R G S G V T N R H V E L G D R V S R T . . . . . . 93805 ACACGTAGATATAGGGGATCGGAGTGTCACGTACCGACACAAGAGGAATAATGAATATGA T R R Y R G S E C H V P T Q E E - - I - H V D I G D R S V T Y R H K R N N E Y E D T - I - G I G V S R T D T R G I M N M . . . . . . 93865 GGGATCGAAGTGTCACGTACCGACACAAGAGAATTAAAGATAATGAATCTTGAAAGATGT G I E V S R T D T R E L K I M N L E R C G S K C H V P T Q E N - R - - I L K D V R D R S V T Y R H K R I K D N E S - K M . . . . . . 93925 TAATATACTCAATCTAACGAACATAATTCCCAAATGAGTATGGTGTTAAGGCTTGAGCCC - Y T Q S N E H N S Q M S M V L R L E P N I L N L T N I I P K - V W C - G L S P L I Y S I - R T - F P N E Y G V K A - A . . . . . . 93985 TCATGGATGAACTTGATGGTACTTATTGATGATTATAATACTTGTTGTGGCTACATGTTG S W M N L M V L I D D Y N T C C G Y M L H G - T - W Y L L M I I I L V V A T C - L M D E L D G T Y - - L - Y L L W L H V . . . . . . 94045 AGTTTTATAGTTGATTTACGATAATATTGATATATACTGTCCCCTATTTTGAGTTGGCCG S F I V D L R - Y - Y I L S P I L S W P V L - L I Y D N I D I Y C P L F - V G R E F Y S - F T I I L I Y T V P Y F E L A . . . . . . 94105 ATGATATCTACTGAGTACCCGTGTTTTGTACTAACCCCTACTTTTATGTTTTCTTCTTGT M I S T E Y P C F V L T P T F M F S S C - Y L L S T R V L Y - P L L L C F L L V D D I Y - V P V F C T N P Y F Y V F F L . . . . . . 94165 TTATTTGTGGAGTGCAGCAAACGTGCCATCGTCTTCAACTCAACAGTAATTCAAGCCAGT L F V E C S K R A I V F N S T V I Q A S Y L W S A A N V P S S S T Q Q - F K P V F I C G V Q Q T C H R L Q L N S N S S Q . . . . . . 94225 CTTACCACATCGGAAATTCAGGGTGAGCTAATGCTTCTAGCTTGGACTGGATCTCCTTCT L T T S E I Q G E L M L L A W T G S P S L P H R K F R V S - C F - L G L D L L L S Y H I G N S G - A N A S S L D W I S F . . . . . . 94285 TCAAGTCTTGATGCCTTGAACTTCTGGCATGGACTAGCTTCTGATGTATTTTTAGCTTTT S S L D A L N F W H G L A S D V F L A F Q V L M P - T S G M D - L L M Y F - L L F K S - C L E L L A W T S F - C I F S F . . . . . . 94345 AGAATACTCTTAGTTTAGTCATTTGATCGTAGATGTTCTTGTGATGATGACTTCCAGGTT R I L L V - S F D R R C S C D D D F Q V E Y S - F S H L I V D V L V M M T S R F - N T L S L V I - S - M F L - - - L P G . . . . . . 94405 TTGGGAATAATAGATGTTGAATATTGATAGTTATTGAATTGGTTTTTATTAATGAGTTAA L G I I D V E Y - - L L N W F L L M S - W E - - M L N I D S Y - I G F Y - - V K F G N N R C - I L I V I E L V F I N E L . . . . . . 94465 GTGTTCCGCATTACTTTCTGTTGTTATTACATAGAAATGTTAAGGTTTAGATCGGTTGGT V F R I T F C C Y Y I E M L R F R S V G C S A L L S V V I T - K C - G L D R L V S V P H Y F L L L L H R N V K V - I G W . . . . . . 94525 TCGCTCACATAGGAGGGTAAGTGTGGGTGCCAGTCGCAACCCGGTTTGGGTCGTGACAAA S L T - E G K C G C Q S Q P G L G R D K R S H R R V S V G A S R N P V W V V T N F A H I G G - V W V P V A T R F G S - Q . . . . . . 94585 CTTGGTATCAGAGCCTTAGGTTCGTTGGTCTCATCACACAAGAACAGGTCTAGTAGAGTC L G I R A L G S L V S S H K N R S S R V L V S E P - V R W S H H T R T G L V E S T W Y Q S L R F V G L I T Q E Q V - - S . . . . . . 94645 TTAAGGAACGGTAGGGGGACGCCTTTACTTTTCCTTGAGAGGCTATAAGACTTTCGGAAA L R N G R G T P L L F L E R L - D F R K - G T V G G R L Y F S L R G Y K T F G K L K E R - G D A F T F P - E A I R L S E . . . . . . 94705 AATTTCACTCTTTCATTCTTTCTTTTATGCTACTACTTGAGTCCAATTGGTATCTAGGCG N F T L S F F L L C Y Y L S P I G I - A I S L F H S F F Y A T T - V Q L V S R R K F H S F I L S F M L L L E S N W Y L G . . . . . . 94765 ATACGAATTGGTATCTGACCATCTTCACTCTCTTTCGCAGATGGTTAGAACTAGAGCAAC I R I G I - P S S L S F A D G - N - S N Y E L V S D H L H S L S Q M V R T R A T D T N W Y L T I F T L F R R W L E L E Q . . . . . . 94825 GACTACGTCAACACCAACACCGGCCAGACAAGAAACAACGGAGCCAGCCACTGGGGTTGT D Y V N T N T G Q T R N N G A S H W G C T T S T P T P A R Q E T T E P A T G V V R L R Q H Q H R P D K K Q R S Q P L G L . 94885 GG W Maximal non-overlapping open reading frames (>= 64 codons): >C10HBa0115K16.1+_PGL-6_AGS-1_PPS_1 (92665 93003) (frame '1'; 336 bp, 112 residues) 1 CNDPFSHFER QTLFLEKLAE ATNPMTDRHG HDGLSQGLIS KHLENLKLGT KNRLSELCDG 61 MEGRTVTGVT DRHRPLVEIW VSELYDDLQD GPSQARRPVT GCANPRQSRI SG- >C10HBa0115K16.1+_PGL-6_AGS-1_PPS_2 (94075 94362) (frame '1'; 285 bp, 95 residues) 1 YILSPILSWP MISTEYPCFV LTPTFMFSSC LFVECSKRAI VFNSTVIQAS LTTSEIQGEL 61 MLLAWTGSPS SSLDALNFWH GLASDVFLAF RILLV- >C10HBa0115K16.1+_PGL-6_AGS-1_PPS_3 (94683 94886) (frame '0'; 204 bp, 68 residues) 1 EAIRLSEKFH SFILSFMLLL ESNWYLGDTN WYLTIFTLFR RWLELEQRLR QHQHRPDKKQ 61 RSQPLGLW AGS-2 (94314 93873,93756 93572,93524 93467) SCR (e 0.783 d 0.000 a 0.000,e 0.919 d 0.900 a 0.000,e 0.828) Exon 1 94314 93873 ( 442 n); score: 0.783 Intron 1 93872 93757 ( 116 n); Pd: 0.000 Pa: 0.000 Exon 2 93756 93572 ( 185 n); score: 0.919 Intron 2 93571 93525 ( 47 n); Pd: 0.900 Pa: 0.000 Exon 3 93524 93467 ( 58 n); score: 0.828 PGS (94314 93873,93756 93572,93524 93467) SGN-E241789+ 3-phase translation of AGS-2 (-strand): . . . . . . 94314 ATGCCAGAAGTTCAAGGCATCAAGACTTGAAGAAGGAGATCCAGTCCAAGCTAGAAGCAT M P E V Q G I K T - R R R S S P S - K H C Q K F K A S R L E E G D P V Q A R S I A R S S R H Q D L K K E I Q S K L E A . . . . . . 94254 TAGCTCACCCTGAATTTCCGATGTGGTAAGACTGGCTTGAATTACTGTTGAGTTGAAGAC - L T L N F R C G K T G L N Y C - V E D S S P - I S D V V R L A - I T V E L K T L A H P E F P M W - D W L E L L L S - R . . . . . . 94194 GATGGCACGTTTGCTGCACTCCACAAATAAACAAGAAGAAAACATAAAAGTAGGGGTTAG D G T F A A L H K - T R R K H K S R G - M A R L L H S T N K Q E E N I K V G V S R W H V C C T P Q I N K K K T - K - G L . . . . . . 94134 TACAAAACACGGGTACTCAGTAGATATCATCGGCCAACTCAAAATAGGGGACAGTATATA Y K T R V L S R Y H R P T Q N R G Q Y I T K H G Y S V D I I G Q L K I G D S I Y V Q N T G T Q - I S S A N S K - G T V Y . . . . . . 94074 TCAATATTATCGTAAATCAACTATAAAACTCAACATGTAGCCACAACAAGTATTATAATC S I L S - I N Y K T Q H V A T T S I I I Q Y Y R K S T I K L N M - P Q Q V L - S I N I I V N Q L - N S T C S H N K Y Y N . . . . . . 94014 ATCAATAAGTACCATCAAGTTCATCCATGAGGGCTCAAGCCTTAACACCATACTCATTTG I N K Y H Q V H P - G L K P - H H T H L S I S T I K F I H E G S S L N T I L I W H Q - V P S S S S M R A Q A L T P Y S F . . . . . . 93954 GGAATTATGTTCGTTAGATTGAGTATATTAACATCTTTCAAGATTCATTATCTTTAATTC G I M F V R L S I L T S F K I H Y L - F E L C S L D - V Y - H L S R F I I F N S G N Y V R - I E Y I N I F Q D S L S L I . . . : . . . 93894 TCTTGTGTCGGTACGTGACACT : CCGATCCCCTAATTCTACGTGTCGGTTCGTGACACCCG S C V G T - H : S D P L I L R V G S - H P L V S V R D T : P I P - F Y V S V R D T R L L C R Y V T L : R S P N S T C R F V T P . . . . . . 93718 ATCCCCTAATTCTACGTGTCGGTTCGTGACACCCGATCCCCTAATTCTACGTGTCGGTTC I P - F Y V S V R D T R S P N S T C R F S P N S T C R F V T P D P L I L R V G S D P L I L R V G S - H P I P - F Y V S V . . . . . . 93658 GTGACACCCGATCCCCTAATTCTACGTGTCGGTTCGTGACACCCGATCCCCTAATTCTAC V T P D P L I L R V G S - H P I P - F Y - H P I P - F Y V S V R D T R S P N S T R D T R S P N S T C R F V T P D P L I L . . . : . . . 93598 ATGTCGGTTCGTGACACCCGATCCCCT : AATCCCATTAATTTAATTCATAAAGCCTTCTTC M S V R D T R S P : N P I N L I H K A F F C R F V T P D P L : I P L I - F I K P S S H V G S - H P I P : - S H - F N S - S L L . . . 93491 TATACCAAAGCATCATCATTAATAA Y T K A S S L I I P K H H H - - L Y Q S I I I N Maximal non-overlapping open reading frames (>= 64 codons): none AGS-3 (97075 94897) SCR (e 0.955) Exon 1 97075 94897 (2179 n); score: 0.955 PGS (95325 94897) SGN-E352180+ PGS (95513 94960) SGN-E329287- PGS (95683 94964) SGN-E356614+ PGS (95680 95017) SGN-E352401+ PGS (95878 95172) SGN-E349404+ PGS (95878 95206) SGN-E351625+ PGS (95878 95271) SGN-E357065+ PGS (95878 95363) SGN-E352365+ PGS (96320 95531) SGN-E356912+ PGS (96244 95547) SGN-E356209+ PGS (95773 95587) SGN-E353359+ PGS (96320 95639) SGN-E214046+ PGS (96310 95787) SGN-E353805+ PGS (96320 95827) SGN-E577713+ PGS (96320 95846) SGN-E244046+ PGS (96555 96298) SGN-E355232+ PGS (96485 96298) SGN-E351414+ PGS (96485 96298) SGN-E355244+ PGS (97004 96325) SGN-E368762+ PGS (97075 96362) SGN-E379315+ PGS (96532 96409) SGN-E578271+ PGS (97075 96479) SGN-E375319+ PGS (97075 96550) SGN-E204434+ PGS (97004 96646) SGN-E240817+ 3-phase translation of AGS-3 (-strand): . . . . . . 97075 GAATCCCTTGACAAATCGGCGGTAGTAGCTAGCTAACCCAACAAAGCTCCTTATTTCTAA E S L D K S A V V A S - P N K A P Y F - N P L T N R R - - L A N P T K L L I S N I P - Q I G G S S - L T Q Q S S L F L . . . . . . 97015 CACATTAGTGGGTCTTACCCAATTCTTCACTGTCTCAATCTTAGAAGGATCCACCATCAC H I S G S Y P I L H C L N L R R I H H H T L V G L T Q F F T V S I L E G S T I T T H - W V L P N S S L S Q S - K D P P S . . . . . . 96955 TCCATCCTTAGAAACCACGTGCCCCAAGAAGGACACCGCATCTAGACAAAACTCACACTT S I L R N H V P Q E G H R I - T K L T L P S L E T T C P K K D T A S R Q N S H L L H P - K P R A P R R T P H L D K T H T . . . . . . 96895 AGAGAACTTGGCATAAAGCTTTTTCTCCCTCAACATTTCCAATACCATTCTCAAATGCTC R E L G I K L F L P Q H F Q Y H S Q M L E N L A - S F F S L N I S N T I L K C S - R T W H K A F S P S T F P I P F S N A . . . . . . 96835 TTCATGTTCCTTCTTGCTCTTTGAGTATACCAATATATCATCAATAAATACGATCACGAA F M F L L A L - V Y Q Y I I N K Y D H E S C S F L L F E Y T N I S S I N T I T K L H V P S C S L S I P I Y H Q - I R S R . . . . . . 96775 GAGGTCCAAATATGGCTTAAAAATCCCGTTCATCAAGCTCATGAACGCAGCAGGGGCATT E V Q I W L K N P V H Q A H E R S R G I R S K Y G L K I P F I K L M N A A G A F R G P N M A - K S R S S S S - T Q Q G H . . . . . . 96715 CGTAAGACCAAAGGACATCACTACAAATTCGTAATGCCCATACCTCGTTCGAAAAGCAGT R K T K G H H Y K F V M P I P R S K S S V R P K D I T T N S - C P Y L V R K A V S - D Q R T S L Q I R N A H T S F E K Q . . . . . . 96655 CTTTGGCACATCCGTTGCCCATATTTTCAATTGATGATAACCGGATCTCAAGTCAATCTT L W H I R C P Y F Q L M I T G S Q V N L F G T S V A H I F N - - - P D L K S I L S L A H P L P I F S I D D N R I S S Q S . . . . . . 96595 AGAGAAGACACAAGCACCTTGTAACTGATTGAACAAATCATCAATGCGGGGAAGAGGATA R E D T S T L - L I E Q I I N A G K R I E K T Q A P C N - L N K S S M R G R G Y - R R H K H L V T D - T N H Q C G E E D . . . . . . 96535 CTTGTTCTTTATGGTTACCTTGTTTTAGTTGTCTGTAGTCTATACACATTCGAAAACTCC L V L Y G Y L V L V V C S L Y T F E N S L F F M V T L F - L S V V Y T H S K T P T C S L W L P C F S C L - S I H I R K L . . . . . . 96475 CATCCTTCTTCTTTACAAACAAAACTGGAGCACCCCAAGGAGATGCACTTGGTCTAATGA H P S S L Q T K L E H P K E M H L V - - I L L L Y K Q N W S T P R R C T W S N E P S F F F T N K T G A P Q G D A L G L M . . . . . . 96415 AGCCTTTGTTCAATAACTCTTGAAGTTGTGCTTTTAACTCTCTTAACTCCGCGGGAGCCA S L C S I T L E V V L L T L L T P R E P A F V Q - L L K L C F - L S - L R G S H K P L F N N S - S C A F N S L N S A G A . . . . . . 96355 TTCTATAAGGGGGTATAGAAATGGGGTGAGTACCGGGTTCAAGATCAATACAGAAGTCAT F Y K G V - K W G E Y R V Q D Q Y R S H S I R G Y R N G V S T G F K I N T E V M I L - G G I E M G - V P G S R S I Q K S . . . . . . 96295 GCAATCACAAACCAGAAGATTACCTGTGATGACAGCATCAGATGCTTCCGGTTCAGACCG A I T N Q K I T C D D S I R C F R F R P Q S Q T R R L P V M T A S D A S G S D R C N H K P E D Y L - - Q H Q M L P V Q T . . . . . . 96235 CCCAGGGAAAGCGTAACAATGGTCCCTATCGTTCGTCTGTCCGTTGCCCCTACCATGTTG P R E S V T M V P I V R L S V A P T M L P G K A - Q W S L S F V C P L P L P C C A Q G K R N N G P Y R S S V R C P Y H V . . . . . . 96175 TGATGTAGTGGCCCCATTTTGCCCATTACCTCTGCCGTTTTGGTGACCACTATTACCTCG - C S G P I L P I T S A V L V T T I T S D V V A P F C P L P L P F W - P L L P R V M - W P H F A H Y L C R F G D H Y Y L . . . . . . 96115 ACCACCACGCCCTCCAGAAAAACGGCCTCTATCATGACCACCTCTACCTCTAGTTATTGG T T T P S R K T A S I M T T S T S S Y W P P R P P E K R P L S - P P L P L V I G D H H A L Q K N G L Y H D H L Y L - L L . . . . . . 96055 GGGTCTGTAACTTGGTCTGGGACAATTTCTCCTAATATGTCCAATCTCCCCACATCCATA G S V T W S G T I S P N M S N L P T S I G L - L G L G Q F L L I C P I S P H P - G V C N L V W D N F S - Y V Q S P H I H . . . . . . 95995 ACATTCTTTGGAGTCGATCATATGCCCCTCGGAGAAGTGTTGACCGGTCTGAGGTGGTCC T F F G V D H M P L G E V L T G L R W S H S L E S I I C P S E K C - P V - G G P N I L W S R S Y A P R R S V D R S E V V . . . . . . 95935 CCCAACTACAGTCTGTAGAGAAGACTGAATTGGTCGGACTGAGTAACTTCCCGAACCCTG P N Y S L - R R L N W S D - V T S R T L P T T V C R E D - I G R T E - L P E P C P Q L Q S V E K T E L V G L S N F P N P . . . . . . 95875 TCCTCTAGTGTAAGAACCATTAAACTCACCTCCCTTTCGAAGCCTTTTTGATGTCGATGT S S S V R T I K L T S L S K P F - C R C P L V - E P L N S P P F R S L F D V D V V L - C K N H - T H L P F E A F L M S M . . . . . . 95815 TGTGGTGAAGTCGCCTGGCTTCACTCCTTTCACTTCTATCACAAAGTCTACCACCTCTTG C G E V A W L H S F H F Y H K V Y H L L V V K S P G F T P F T S I T K S T T S W L W - S R L A S L L S L L S Q S L P P L . . . . . . 95755 GAAGGATTTTGCTGTTGCCGCTATCTGTAAGGCCGAGATCCGCAATTCTGACCTCAACCC E G F C C C R Y L - G R D P Q F - P Q P K D F A V A A I C K A E I R N S D L N P G R I L L L P L S V R P R S A I L T S T . . . . . . 95695 CTTCACAAACCGGCGAATCCGCTCTTGAGGACTGAAACAGAGTTGAGTGGCATATCTAGA L H K P A N P L L R T E T E L S G I S R F T N R R I R S - G L K Q S - V A Y L D P S Q T G E S A L E D - N R V E W H I - . . . . . . 95635 TAATGCACGAAACTTAGCCTCATAAGCATTAACCGACATCCTACCTTGCTCTAGGCTCAA - C T K L S L I S I N R H P T L L - A Q N A R N L A S - A L T D I L P C S R L K I M H E T - P H K H - P T S Y L A L G S . . . . . . 95575 GAACTCATCCCTTTTCCTATCCCTCAAAGTTCGGGGGATATACTTCTCCATAAACAAACT E L I P F P I P Q S S G D I L L H K Q T N S S L F L S L K V R G I Y F S I N K L R T H P F S Y P S K F G G Y T S P - T N . . . . . . 95515 AGAGAATGAGGCCCAAGTCATAGGTGGTGCCTCTATTGGTTGACACTCGATATGTGACCG R E - G P S H R W C L Y W L T L D M - P E N E A Q V I G G A S I G - H S I C D R - R M R P K S - V V P L L V D T R Y V T . . . . . . 95455 CCACCACATTTTGGCATTCCCTTGAAACTGATAAGTCACAAACTCCACACCAAACCGTTC P P H F G I P L K L I S H K L H T K P F H H I L A F P - N - - V T N S T P N R S A T T F W H S L E T D K S Q T P H Q T V . . . . . . 95395 TACTATACCCATCTTGTGTAGTAGCTCGTGACAGTCAACCAGAAAATCATAAGCATCCTC Y Y T H L V - - L V T V N Q K I I S I L T I P I L C S S S - Q S T R K S - A S S L L Y P S C V V A R D S Q P E N H K H P . . . . . . 95335 AGATTCCGCACCCTTGAAGACTGGAGTTTTCAATTTCAAGAACATACTGAAAAGTTCATG R F R T L E D W S F Q F Q E H T E K F M D S A P L K T G V F N F K N I L K S S C Q I P H P - R L E F S I S R T Y - K V H . . . . . . 95275 CTGATCATTTGTCATTATAGGCCCAGTAGTCAGACGTGGAAACGTGCCTATTTCCAATGG L I I C H Y R P S S Q T W K R A Y F Q W - S F V I I G P V V R R G N V P I S N G A D H L S L - A Q - S D V E T C L F P M . . . . . . 95215 AACATCCATGCGGGGAGCCATAGTAGCCGCATGTTGTACTTCTGAAACCGGAGGTGTTGG N I H A G S H S S R M L Y F - N R R C W T S M R G A I V A A C C T S E T G G V G E H P C G E P - - P H V V L L K P E V L . . . . . . 95155 CGCAGAAAACACTGGAGGTGCCTGACCTTGATCAGATAACCCGCTAAGATAAGTCAGAAC R R K H W R C L T L I R - P A K I S Q N A E N T G G A - P - S D N P L R - V R T A Q K T L E V P D L D Q I T R - D K S E . . . . . . 95095 CTGATTGATCATCTCTAGGGTAGGTTGGGGTGGCATTTCCTCATTTTGCACTTGTTCAGT L I D H L - G R L G W H F L I L H L F S - L I I S R V G W G G I S S F C T C S V P D - S S L G - V G V A F P H F A L V Q . . . . . . 95035 TTCTCCATCCTCCCCTTCTCTTATTACTTCCTCGGTCGGTGGAGGAGTCACTGCCCTAGT F S I L P F S Y Y F L G R W R S H C P S S P S S P S L I T S S V G G G V T A L V F L H P P L L L L L P R S V E E S L P - . . . . . . 94975 ATCAGATGGGCTAGGTGCTTGTCCTCTCCCTCTAGAGGACGTCCTCCCACGACCTCTTCC I R W A R C L S S P S R G R P P T T S S S D G L G A C P L P L E D V L P R P L P Y Q M G - V L V L S L - R T S S H D L F . . 94915 ACGGCCCCTTGCCGCTGTT T A P C R C R P L A A V H G P L P L Maximal non-overlapping open reading frames (>= 64 codons): >C10HBa0115K16.1-_PGL-6_AGS-3_PPS_1 (96172 95918) (frame '1'; 252 bp, 84 residues) 1 CSGPILPITS AVLVTTITST TTPSRKTASI MTTSTSSYWG SVTWSGTISP NMSNLPTSIT 61 FFGVDHMPLG EVLTGLRWSP NYSL- >C10HBa0115K16.1-_PGL-6_AGS-3_PPS_2 (96811 96572) (frame '1'; 237 bp, 79 residues) 1 VYQYIINKYD HEEVQIWLKN PVHQAHERSR GIRKTKGHHY KFVMPIPRSK SSLWHIRCPY 61 FQLMITGSQV NLREDTSTL- >C10HBa0115K16.1-_PGL-6_AGS-3_PPS_3 (95371 95171) (frame '1'; 198 bp, 66 residues) 1 LVTVNQKIIS ILRFRTLEDW SFQFQEHTEK FMLIICHYRP SSQTWKRAYF QWNIHAGSHS 61 SRMLYF- >C10HBa0115K16.1-_PGL-6_AGS-3_PPS_4 (95091 94897) (frame '2'; 195 bp, 65 residues) 1 LIISRVGWGG ISSFCTCSVS PSSPSLITSS VGGGVTALVS DGLGACPLPL EDVLPRPLPR 61 PLAAV >C10HBa0115K16.1-_PGL-6_AGS-3_PPS_5 (95862 95668) (frame '2'; 192 bp, 64 residues) 1 EPLNSPPFRS LFDVDVVVKS PGFTPFTSIT KSTTSWKDFA VAAICKAEIR NSDLNPFTNR 61 RIRS- 3-phase translation of AGS-3 (+strand): . . . . . . 94897 AACAGCGGCAAGGGGCCGTGGAAGAGGTCGTGGGAGGACGTCCTCTAGAGGGAGAGGACA N S G K G P W K R S W E D V L - R E R T T A A R G R G R G R G R T S S R G R G Q Q R Q G A V E E V V G G R P L E G E D . . . . . . 94957 AGCACCTAGCCCATCTGATACTAGGGCAGTGACTCCTCCACCGACCGAGGAAGTAATAAG S T - P I - Y - G S D S S T D R G S N K A P S P S D T R A V T P P P T E E V I R K H L A H L I L G Q - L L H R P R K - - . . . . . . 95017 AGAAGGGGAGGATGGAGAAACTGAACAAGTGCAAAATGAGGAAATGCCACCCCAACCTAC R R G G W R N - T S A K - G N A T P T Y E G E D G E T E Q V Q N E E M P P Q P T E K G R M E K L N K C K M R K C H P N L . . . . . . 95077 CCTAGAGATGATCAATCAGGTTCTGACTTATCTTAGCGGGTTATCTGATCAAGGTCAGGC P R D D Q S G S D L S - R V I - S R S G L E M I N Q V L T Y L S G L S D Q G Q A P - R - S I R F - L I L A G Y L I K V R . . . . . . 95137 ACCTCCAGTGTTTTCTGCGCCAACACCTCCGGTTTCAGAAGTACAACATGCGGCTACTAT T S S V F C A N T S G F R S T T C G Y Y P P V F S A P T P P V S E V Q H A A T M H L Q C F L R Q H L R F Q K Y N M R L L . . . . . . 95197 GGCTCCCCGCATGGATGTTCCATTGGAAATAGGCACGTTTCCACGTCTGACTACTGGGCC G S P H G C S I G N R H V S T S D Y W A A P R M D V P L E I G T F P R L T T G P W L P A W M F H W K - A R F H V - L L G . . . . . . 95257 TATAATGACAAATGATCAGCATGAACTTTTCAGTATGTTCTTGAAATTGAAAACTCCAGT Y N D K - S A - T F Q Y V L E I E N S S I M T N D Q H E L F S M F L K L K T P V L - - Q M I S M N F S V C S - N - K L Q . . . . . . 95317 CTTCAAGGGTGCGGAATCTGAGGATGCTTATGATTTTCTGGTTGACTGTCACGAGCTACT L Q G C G I - G C L - F S G - L S R A T F K G A E S E D A Y D F L V D C H E L L S S R V R N L R M L M I F W L T V T S Y . . . . . . 95377 ACACAAGATGGGTATAGTAGAACGGTTTGGTGTGGAGTTTGTGACTTATCAGTTTCAAGG T Q D G Y S R T V W C G V C D L S V S R H K M G I V E R F G V E F V T Y Q F Q G Y T R W V - - N G L V W S L - L I S F K . . . . . . 95437 GAATGCCAAAATGTGGTGGCGGTCACATATCGAGTGTCAACCAATAGAGGCACCACCTAT E C Q N V V A V T Y R V S T N R G T T Y N A K M W W R S H I E C Q P I E A P P M G M P K C G G G H I S S V N Q - R H H L . . . . . . 95497 GACTTGGGCCTCATTCTCTAGTTTGTTTATGGAGAAGTATATCCCCCGAACTTTGAGGGA D L G L I L - F V Y G E V Y P P N F E G T W A S F S S L F M E K Y I P R T L R D - L G P H S L V C L W R S I S P E L - G . . . . . . 95557 TAGGAAAAGGGATGAGTTCTTGAGCCTAGAGCAAGGTAGGATGTCGGTTAATGCTTATGA - E K G - V L E P R A R - D V G - C L - R K R D E F L S L E Q G R M S V N A Y E I G K G M S S - A - S K V G C R L M L M . . . . . . 95617 GGCTAAGTTTCGTGCATTATCTAGATATGCCACTCAACTCTGTTTCAGTCCTCAAGAGCG G - V S C I I - I C H S T L F Q S S R A A K F R A L S R Y A T Q L C F S P Q E R R L S F V H Y L D M P L N S V S V L K S . . . . . . 95677 GATTCGCCGGTTTGTGAAGGGGTTGAGGTCAGAATTGCGGATCTCGGCCTTACAGATAGC D S P V C E G V E V R I A D L G L T D S I R R F V K G L R S E L R I S A L Q I A G F A G L - R G - G Q N C G S R P Y R - . . . . . . 95737 GGCAACAGCAAAATCCTTCCAAGAGGTGGTAGACTTTGTGATAGAAGTGAAAGGAGTGAA G N S K I L P R G G R L C D R S E R S E A T A K S F Q E V V D F V I E V K G V K R Q Q Q N P S K R W - T L - - K - K E - . . . . . . 95797 GCCAGGCGACTTCACCACAACATCGACATCAAAAAGGCTTCGAAAGGGAGGTGAGTTTAA A R R L H H N I D I K K A S K G R - V - P G D F T T T S T S K R L R K G G E F N S Q A T S P Q H R H Q K G F E R E V S L . . . . . . 95857 TGGTTCTTACACTAGAGGACAGGGTTCGGGAAGTTACTCAGTCCGACCAATTCAGTCTTC W F L H - R T G F G K L L S P T N S V F G S Y T R G Q G S G S Y S V R P I Q S S M V L T L E D R V R E V T Q S D Q F S L . . . . . . 95917 TCTACAGACTGTAGTTGGGGGACCACCTCAGACCGGTCAACACTTCTCCGAGGGGCATAT S T D C S W G T T S D R S T L L R G A Y L Q T V V G G P P Q T G Q H F S E G H M L Y R L - L G D H L R P V N T S P R G I . . . . . . 95977 GATCGACTCCAAAGAATGTTATGGATGTGGGGAGATTGGACATATTAGGAGAAATTGTCC D R L Q R M L W M W G D W T Y - E K L S I D S K E C Y G C G E I G H I R R N C P - S T P K N V M D V G R L D I L G E I V . . . . . . 96037 CAGACCAAGTTACAGACCCCCAATAACTAGAGGTAGAGGTGGTCATGATAGAGGCCGTTT Q T K L Q T P N N - R - R W S - - R P F R P S Y R P P I T R G R G G H D R G R F P D Q V T D P Q - L E V E V V M I E A V . . . . . . 96097 TTCTGGAGGGCGTGGTGGTCGAGGTAATAGTGGTCACCAAAACGGCAGAGGTAATGGGCA F W R A W W S R - - W S P K R Q R - W A S G G R G G R G N S G H Q N G R G N G Q F L E G V V V E V I V V T K T A E V M G . . . . . . 96157 AAATGGGGCCACTACATCACAACATGGTAGGGGCAACGGACAGACGAACGATAGGGACCA K W G H Y I T T W - G Q R T D E R - G P N G A T T S Q H G R G N G Q T N D R D H K M G P L H H N M V G A T D R R T I G T . . . . . . 96217 TTGTTACGCTTTCCCTGGGCGGTCTGAACCGGAAGCATCTGATGCTGTCATCACAGGTAA L L R F P W A V - T G S I - C C H H R - C Y A F P G R S E P E A S D A V I T G N I V T L S L G G L N R K H L M L S S Q V . . . . . . 96277 TCTTCTGGTTTGTGATTGCATGACTTCTGTATTGATCTTGAACCCGGTACTCACCCCATT S S G L - L H D F C I D L E P G T H P I L L V C D C M T S V L I L N P V L T P F I F W F V I A - L L Y - S - T R Y S P H . . . . . . 96337 TCTATACCCCCTTATAGAATGGCTCCCGCGGAGTTAAGAGAGTTAAAAGCACAACTTCAA S I P P Y R M A P A E L R E L K A Q L Q L Y P L I E W L P R S - E S - K H N F K F Y T P L - N G S R G V K R V K S T T S . . . . . . 96397 GAGTTATTGAACAAAGGCTTCATTAGACCAAGTGCATCTCCTTGGGGTGCTCCAGTTTTG E L L N K G F I R P S A S P W G A P V L S Y - T K A S L D Q V H L L G V L Q F C R V I E Q R L H - T K C I S L G C S S F . . . . . . 96457 TTTGTAAAGAAGAAGGATGGGAGTTTTCGAATGTGTATAGACTACAGACAACTAAAACAA F V K K K D G S F R M C I D Y R Q L K Q L - R R R M G V F E C V - T T D N - N K V C K E E G W E F S N V Y R L Q T T K T . . . . . . 96517 GGTAACCATAAAGAACAAGTATCCTCTTCCCCGCATTGATGATTTGTTCAATCAGTTACA G N H K E Q V S S S P H - - F V Q S V T V T I K N K Y P L P R I D D L F N Q L Q R - P - R T S I L F P A L M I C S I S Y . . . . . . 96577 AGGTGCTTGTGTCTTCTCTAAGATTGACTTGAGATCCGGTTATCATCAATTGAAAATATG R C L C L L - D - L E I R L S S I E N M G A C V F S K I D L R S G Y H Q L K I W K V L V S S L R L T - D P V I I N - K Y . . . . . . 96637 GGCAACGGATGTGCCAAAGACTGCTTTTCGAACGAGGTATGGGCATTACGAATTTGTAGT G N G C A K D C F S N E V W A L R I C S A T D V P K T A F R T R Y G H Y E F V V G Q R M C Q R L L F E R G M G I T N L - . . . . . . 96697 GATGTCCTTTGGTCTTACGAATGCCCCTGCTGCGTTCATGAGCTTGATGAACGGGATTTT D V L W S Y E C P C C V H E L D E R D F M S F G L T N A P A A F M S L M N G I F - C P L V L R M P L L R S - A - - T G F . . . . . . 96757 TAAGCCATATTTGGACCTCTTCGTGATCGTATTTATTGATGATATATTGGTATACTCAAA - A I F G P L R D R I Y - - Y I G I L K K P Y L D L F V I V F I D D I L V Y S K L S H I W T S S - S Y L L M I Y W Y T Q . . . . . . 96817 GAGCAAGAAGGAACATGAAGAGCATTTGAGAATGGTATTGGAAATGTTGAGGGAGAAAAA E Q E G T - R A F E N G I G N V E G E K S K K E H E E H L R M V L E M L R E K K R A R R N M K S I - E W Y W K C - G R K . . . . . . 96877 GCTTTATGCCAAGTTCTCTAAGTGTGAGTTTTGTCTAGATGCGGTGTCCTTCTTGGGGCA A L C Q V L - V - V L S R C G V L L G A L Y A K F S K C E F C L D A V S F L G H S F M P S S L S V S F V - M R C P S W G . . . . . . 96937 CGTGGTTTCTAAGGATGGAGTGATGGTGGATCCTTCTAAGATTGAGACAGTGAAGAATTG R G F - G W S D G G S F - D - D S E E L V V S K D G V M V D P S K I E T V K N W T W F L R M E - W W I L L R L R Q - R I . . . . . . 96997 GGTAAGACCCACTAATGTGTTAGAAATAAGGAGCTTTGTTGGGTTAGCTAGCTACTACCG G K T H - C V R N K E L C W V S - L L P V R P T N V L E I R S F V G L A S Y Y R G - D P L M C - K - G A L L G - L A T T . . 97057 CCGATTTGTCAAGGGATTC P I C Q G I R F V K G F A D L S R D Maximal non-overlapping open reading frames (>= 64 codons): >C10HBa0115K16.1+_PGL-6_AGS-3_PPS_1 (94898 96373) (frame '2'; 1473 bp, 491 residues) 1 TAARGRGRGR GRTSSRGRGQ APSPSDTRAV TPPPTEEVIR EGEDGETEQV QNEEMPPQPT 61 LEMINQVLTY LSGLSDQGQA PPVFSAPTPP VSEVQHAATM APRMDVPLEI GTFPRLTTGP 121 IMTNDQHELF SMFLKLKTPV FKGAESEDAY DFLVDCHELL HKMGIVERFG VEFVTYQFQG 181 NAKMWWRSHI ECQPIEAPPM TWASFSSLFM EKYIPRTLRD RKRDEFLSLE QGRMSVNAYE 241 AKFRALSRYA TQLCFSPQER IRRFVKGLRS ELRISALQIA ATAKSFQEVV DFVIEVKGVK 301 PGDFTTTSTS KRLRKGGEFN GSYTRGQGSG SYSVRPIQSS LQTVVGGPPQ TGQHFSEGHM 361 IDSKECYGCG EIGHIRRNCP RPSYRPPITR GRGGHDRGRF SGGRGGRGNS GHQNGRGNGQ 421 NGATTSQHGR GNGQTNDRDH CYAFPGRSEP EASDAVITGN LLVCDCMTSV LILNPVLTPF 481 LYPLIEWLPR S- >C10HBa0115K16.1+_PGL-6_AGS-3_PPS_2 (96512 97075) (frame '2'; 564 bp, 188 residues) 1 NKVTIKNKYP LPRIDDLFNQ LQGACVFSKI DLRSGYHQLK IWATDVPKTA FRTRYGHYEF 61 VVMSFGLTNA PAAFMSLMNG IFKPYLDLFV IVFIDDILVY SKSKKEHEEH LRMVLEMLRE 121 KKLYAKFSKC EFCLDAVSFL GHVVSKDGVM VDPSKIETVK NWVRPTNVLE IRSFVGLASY 181 YRRFVKGF PGL 7 (+ strand): 97793 101160 AGS-1 (97793 98334) SCR (e 0.881) Exon 1 97793 98334 ( 542 n); score: 0.881 PGS (97793 98334) SGN-E353207- 3-phase translation of AGS-1 (+strand): . . . . . . 97793 AAGGAAGCACAAATCGATGAGGAAGGTGTTTTGAGAATCAAGGGAAGGGTATGCGTACCC K E A Q I D E E G V L R I K G R V C V P R K H K S M R K V F - E S R E G Y A Y P G S T N R - G R C F E N Q G K G M R T . . . . . . 97853 CGCGTCGATGATTTGATCAACACTATTCTGACAGAGGCTCATAGTTCAAAGTATTCGATA R V D D L I N T I L T E A H S S K Y S I A S M I - S T L F - Q R L I V Q S I R Y P R R - F D Q H Y S D R G S - F K V F D . . . . . . 97913 CATCCGGGTGCAACCAAGATGTACCGTGACCTAAAGCAACACTTTTGGTGGAGTAGAATG H P G A T K M Y R D L K Q H F W W S R M I R V Q P R C T V T - S N T F G G V E - T S G C N Q D V P - P K A T L L V E - N . . . . . . 97973 AAGCGTGACGTTGTGGATTTTATTGCCAAATGTCCAAACTGTCAACAAGTAAAGTATGAA K R D V V D F I A K C P N C Q Q V K Y E S V T L W I L L P N V Q T V N K - S M N E A - R C G F Y C Q M S K L S T S K V - . . . . . . 98033 CACCAAAGGCCCGGAGGAACACTTCAGAGAATGCCCATTCCAGAATGGAAGTGGGAAAGA H Q R P G G T L Q R M P I P E W K W E R T K G P E E H F R E C P F Q N G S G K E T P K A R R N T S E N A H S R M E V G K . . . . . . 98093 ATTGCAATGGATTTTGTGGTTGGTCTTCCGAAGACAATGGGTAAGTATGACTCCATTTGG I A M D F V V G L P K T M G K Y D S I W L Q W I L W L V F R R Q W V S M T P F G N C N G F C G W S S E D N G - V - L H L . . . . . . 98153 GTGATTGTTGATAGGTTAACTAAATCTGCTCATTTCATTCCGGTCAAGGTGACTTACAAT V I V D R L T K S A H F I P V K V T Y N - L L I G - L N L L I S F R S R - L T M G D C - - V N - I C S F H S G Q G D L Q . . . . . . 98213 GCAGAAAAGTTAGCCAAACTTTACATCTCGGAAGTGGTGCGATTGCATGGGGTTCCACTA A E K L A K L Y I S E V V R L H G V P L Q K S - P N F T S R K W C D C M G F H Y C R K V S Q T L H L G S G A I A W G S T . . . . . . 98273 TCCATCATATCAGATAGAGGTACGCAGTTTACTTCTAAGTTTTGGATAACATTGCATGCG S I I S D R G T Q F T S K F W I T L H A P S Y Q I E V R S L L L S F G - H C M R I H H I R - R Y A V Y F - V L D N I A C . 98333 GA G Maximal non-overlapping open reading frames (>= 64 codons): >C10HBa0115K16.1+_PGL-7_AGS-1_PPS_1 (97793 98332) (frame '1'; 540 bp, 180 residues) 1 KEAQIDEEGV LRIKGRVCVP RVDDLINTIL TEAHSSKYSI HPGATKMYRD LKQHFWWSRM 61 KRDVVDFIAK CPNCQQVKYE HQRPGGTLQR MPIPEWKWER IAMDFVVGLP KTMGKYDSIW 121 VIVDRLTKSA HFIPVKVTYN AEKLAKLYIS EVVRLHGVPL SIISDRGTQF TSKFWITLHA 3-phase translation of AGS-1 (-strand): . . . . . . 98334 TCCGCATGCAATGTTATCCAAAACTTAGAAGTAAACTGCGTACCTCTATCTGATATGATG S A C N V I Q N L E V N C V P L S D M M P H A M L S K T - K - T A Y L Y L I - W R M Q C Y P K L R S K L R T S I - Y D . . . . . . 98274 GATAGTGGAACCCCATGCAATCGCACCACTTCCGAGATGTAAAGTTTGGCTAACTTTTCT D S G T P C N R T T S E M - S L A N F S I V E P H A I A P L P R C K V W L T F L G - W N P M Q S H H F R D V K F G - L F . . . . . . 98214 GCATTGTAAGTCACCTTGACCGGAATGAAATGAGCAGATTTAGTTAACCTATCAACAATC A L - V T L T G M K - A D L V N L S T I H C K S P - P E - N E Q I - L T Y Q Q S C I V S H L D R N E M S R F S - P I N N . . . . . . 98154 ACCCAAATGGAGTCATACTTACCCATTGTCTTCGGAAGACCAACCACAAAATCCATTGCA T Q M E S Y L P I V F G R P T T K S I A P K W S H T Y P L S S E D Q P Q N P L Q H P N G V I L T H C L R K T N H K I H C . . . . . . 98094 ATTCTTTCCCACTTCCATTCTGGAATGGGCATTCTCTGAAGTGTTCCTCCGGGCCTTTGG I L S H F H S G M G I L - S V P P G L W F F P T S I L E W A F S E V F L R A F G N S F P L P F W N G H S L K C S S G P L . . . . . . 98034 TGTTCATACTTTACTTGTTGACAGTTTGGACATTTGGCAATAAAATCCACAACGTCACGC C S Y F T C - Q F G H L A I K S T T S R V H T L L V D S L D I W Q - N P Q R H A V F I L Y L L T V W T F G N K I H N V T . . . . . . 97974 TTCATTCTACTCCACCAAAAGTGTTGCTTTAGGTCACGGTACATCTTGGTTGCACCCGGA F I L L H Q K C C F R S R Y I L V A P G S F Y S T K S V A L G H G T S W L H P D L H S T P P K V L L - V T V H L G C T R . . . . . . 97914 TGTATCGAATACTTTGAACTATGAGCCTCTGTCAGAATAGTGTTGATCAAATCATCGACG C I E Y F E L - A S V R I V L I K S S T V S N T L N Y E P L S E - C - S N H R R M Y R I L - T M S L C Q N S V D Q I I D . . . . . . 97854 CGGGGTACGCATACCCTTCCCTTGATTCTCAAAACACCTTCCTCATCGATTTGTGCTTCC R G T H T L P L I L K T P S S S I C A S G V R I P F P - F S K H L P H R F V L P A G Y A Y P S L D S Q N T F L I D L C F . 97794 TT L Maximal non-overlapping open reading frames (>= 64 codons): >C10HBa0115K16.1-_PGL-7_AGS-1_PPS_1 (98167 97943) (frame '0'; 222 bp, 74 residues) 1 PINNHPNGVI LTHCLRKTNH KIHCNSFPLP FWNGHSLKCS SGPLVFILYL LTVWTFGNKI 61 HNVTLHSTPP KVLL- AGS-2 (98380 98556) SCR (e 0.955) Exon 1 98380 98556 ( 177 n); score: 0.955 PGS (98380 98556) SGN-E577888- 3-phase translation of AGS-2 (+strand): . . . . . . 98380 CGATGGTCAGTCTGAGAGAACGATTCAAGTGTTGGAAGATATGCTTCGTGCATGTGTGAT R W S V - E N D S S V G R Y A S C M C D D G Q S E R T I Q V L E D M L R A C V I M V S L R E R F K C W K I C F V H V - . . . . . . 98440 AGAGTTTGGTGGCCATTGGGATAGCTTCTTTCCCTTAGCGGAGTTTTCATACAATAATAG R V W W P L G - L L S L S G V F I Q - - E F G G H W D S F F P L A E F S Y N N S - S L V A I G I A S F P - R S F H T I I . . . . . . 98500 CTATCACTCAAGCATTGATATGGCTCCATTTGAAGCATTGTATGGTAGGAGATGTAG L S L K H - Y G S I - S I V W - E M - Y H S S I D M A P F E A L Y G R R C A I T Q A L I W L H L K H C M V G D V Maximal non-overlapping open reading frames (>= 64 codons): none 3-phase translation of AGS-2 (-strand): . . . . . . 98556 CTACATCTCCTACCATACAATGCTTCAAATGGAGCCATATCAATGCTTGAGTGATAGCTA L H L L P Y N A S N G A I S M L E - - L Y I S Y H T M L Q M E P Y Q C L S D S Y T S P T I Q C F K W S H I N A - V I A . . . . . . 98496 TTATTGTATGAAAACTCCGCTAAGGGAAAGAAGCTATCCCAATGGCCACCAAACTCTATC L L Y E N S A K G K K L S Q W P P N S I Y C M K T P L R E R S Y P N G H Q T L S I I V - K L R - G K E A I P M A T K L Y . . . . . . 98436 ACACATGCACGAAGCATATCTTCCAACACTTGAATCGTTCTCTCAGACTGACCATCG T H A R S I S S N T - I V L S D - P S H M H E A Y L P T L E S F S Q T D H H T C T K H I F Q H L N R S L R L T I Maximal non-overlapping open reading frames (>= 64 codons): none AGS-3 (98618 100129,100169 101160) SCR (e 0.913 d 0.000 a 0.000,e 0.838) Exon 1 98618 100129 (1512 n); score: 0.913 Intron 1 100130 100168 ( 39 n); Pd: 0.000 Pa: 0.000 Exon 2 100169 101160 ( 992 n); score: 0.838 PGS (98618 99379) SGN-E354383+ PGS (98960 99416) SGN-E252199+ PGS (99212 99341) SGN-E356257- PGS (99213 99761) SGN-E550322- PGS (99213 99750) SGN-E550212- PGS (99213 99750) SGN-E550065- PGS (99213 99750) SGN-E550201- PGS (99213 99750) SGN-E550207- PGS (99213 99750) SGN-E550335- PGS (99213 99750) SGN-E390013- PGS (99213 99750) SGN-E389834- PGS (99213 99750) SGN-E550484- PGS (99213 99750) SGN-E550211- PGS (99213 99750) SGN-E550464- PGS (99213 99750) SGN-E549941- PGS (99213 99750) SGN-E550025- PGS (99213 99750) SGN-E231589- PGS (99213 99750) SGN-E374999- PGS (99213 99750) SGN-E396039- PGS (99213 99750) SGN-E396056- PGS (99213 99750) SGN-E377133- PGS (99213 99750) SGN-E550127+ PGS (99213 99750) SGN-E550140+ PGS (99213 99750) SGN-E389553+ PGS (99213 99750) SGN-E396054- PGS (99213 99750) SGN-E396058- PGS (99213 99717) SGN-E396057+ PGS (99213 99701) SGN-E377132+ PGS (99213 99685) SGN-E396055+ PGS (99213 99683) SGN-E398551+ PGS (99213 99673) SGN-E396038+ PGS (99213 99420) SGN-E374998+ PGS (99213 99420) SGN-E396069+ PGS (99226 99750) SGN-E241959- PGS (99260 99769) SGN-E349296+ PGS (99402 99706) SGN-E356257+ PGS (99689 100063) SGN-E578076+ PGS (99709 100129,100169 100354) SGN-E347579+ PGS (100351 100686) SGN-E357033- PGS (100361 100597) SGN-E391780+ PGS (100362 100838) SGN-E246710+ PGS (100386 100982) SGN-E546506- PGS (100505 100739) SGN-E209683+ PGS (100664 101160) SGN-E351546+ PGS (100664 101160) SGN-E356206+ PGS (100664 101160) SGN-E356696+ PGS (100735 101021) SGN-E222578- PGS (100745 101159) SGN-E392027- PGS (100746 101148) SGN-E370357- PGS (100775 100975) SGN-E216150- 3-phase translation of AGS-3 (+strand): . . . . . . 98618 GATTCGATAGAGAAAGTGAAGTCTATTCAAGAAAAGCTTCTAGCGGCGCAAAGTAGACAA D S I E K V K S I Q E K L L A A Q S R Q I R - R K - S L F K K S F - R R K V D K F D R E S E V Y S R K A S S G A K - T . . . . . . 98678 AAAGAATATGCAGATCGAAAGGTTAGAGACTTAGAGTTCATGGAGGGTGAACAAGTCTTG K E Y A D R K V R D L E F M E G E Q V L K N M Q I E R L E T - S S W R V N K S C K R I C R S K G - R L R V H G G - T S L . . . . . . 98738 TTGAAAGTTTCACCAATGAAAGGGGTGATGCGGTTTGGAAAAAGGGGTAAACTAAGTCCA L K V S P M K G V M R F G K R G K L S P - K F H Q - K G - C G L E K G V N - V Q V E S F T N E R G D A V W K K G - T K S . . . . . . 98798 AGGTACATTGGACCATTTGAAGTACTTAAGCGAGTAGGAGAGGTGGCTTATGAGTTAGCC R Y I G P F E V L K R V G E V A Y E L A G T L D H L K Y L S E - E R W L M S - P K V H W T I - S T - A S R R G G L - V S . . . . . . 98858 TTGCCTCCAGGGCTGTCCGGAGTACATCCGGTATTCCATGTGTCGATGTTGAAAAGATAC L P P G L S G V H P V F H V S M L K R Y C L Q G C P E Y I R Y S M C R C - K D T L A S R A V R S T S G I P C V D V E K I . . . . . . 98918 CACGGGGATGGAAACTACATTATCTGTTGGGATTCAGTTTTGCTTGATGAGAACTTGTCT H G D G N Y I I C W D S V L L D E N L S T G M E T T L S V G I Q F C L M R T C L P R G W K L H Y L L G F S F A - - E L V . . . . . . 98978 TATGAGGAGGAGCCTGTTGCTATTTTAGATAGAGAAGTTCGCAAGTTGAGGTCAAGAGAG Y E E E P V A I L D R E V R K L R S R E M R R S L L L F - I E K F A S - G Q E R L - G G A C C Y F R - R S S Q V E V K R . . . . . . 99038 ATTGCATCCATCAAGGTGCAATGGAAGAATCGACCGGTTGAAGAAGCCACTTGGGAGAAG I A S I K V Q W K N R P V E E A T W E K L H P S R C N G R I D R L K K P L G R R D C I H Q G A M E E S T G - R S H L G E . . . . . . 99098 GAGGCGGATATGCGAGAAAGATACATACATCTGTTTAAAGATTCAGGTACTCCTTTTCGC E A D M R E R Y I H L F K D S G T P F R R R I C E K D T Y I C L K I Q V L L F A G G G Y A R K I H T S V - R F R Y S F S . . . . . . 99158 CCTTGTTTTCCTTCTTTTGATCGTTCGGGGATGAACGATGGGTAAATTGGTATCTAATGT P C F P S F D R S G M N D G - I G I - C L V F L L L I V R G - T M G K L V S N V P L F S F F - S F G D E R W V N W Y L M . . . . . . 99218 AACGACCCGTTTAGTCGTTTTGAGCGGCAGACTTTATTTTTGGAAAAACTGGCAGAAGCG N D P F S R F E R Q T L F L E K L A E A T T R L V V L S G R L Y F W K N W Q K R - R P V - S F - A A D F I F G K T G R S . . . . . . 99278 ACGGACCCCACGACGGACCATCATGGGCACGACGGACCGTCGCAGGGTCTCGTTTCAAAA T D P T T D H H G H D G P S Q G L V S K R T P R R T I M G T T D R R R V S F Q N D G P H D G P S W A R R T V A G S R F K . . . . . . 99338 CACTTAGAAAATCTGAAATTGGGTACTAAAAATCGACTCTCTGAACTTTGTGACGGAATG H L E N L K L G T K N R L S E L C D G M T - K I - N W V L K I D S L N F V T E W T L R K S E I G Y - K S T L - T L - R N . . . . . . 99398 GCAGGACGGACCGTCACAGACCCGTGGTGGAAATTTGGGTCTCTAAACTCTACGACGACC A G R T V T D P W W K F G S L N S T T T Q D G P S Q T R G G N L G L - T L R R P G R T D R H R P V V E I W V S K L Y D D . . . . . . 99458 TGCAGGACGGACCGTCGCAGGCACGACGGCCCGTCAAAGGTTGCGCAAATCCCAGGCAGA C R T D R R R H D G P S K V A Q I P G R A G R T V A G T T A R Q R L R K S Q A E L Q D G P S Q A R R P V K G C A N P R Q . . . . . . 99518 GTCGGATTTCTGGTTAAGTTTTAAGGGACGTTTTTGACTATTCTTGCCTTAATTATAAAG V G F L V K F - G T F L T I L A L I I K S D F W L S F K G R F - L F L P - L - S S R I S G - V L R D V F D Y S C L N Y K . . . . . . 99578 TTCGTGGGTTTATATTAATAACTCAAATTCTGGAGGGGTTAAAAGAGGTAACCCTAAGTT F V G L Y - - L K F W R G - K R - P - V S W V Y I N N S N S G G V K R G N P K L V R G F I L I T Q I L E G L K E V T L S . . . . . . 99638 AATTAGTGGGGTATTATTGCCATCTTTTATTCTTAATTATATACTAATTAGGGTAAAAGA N - W G I I A I F Y S - L Y T N - G K R I S G V L L P S F I L N Y I L I R V K E - L V G Y Y C H L L F L I I Y - L G - K . . . . . . 99698 AAGAGGGTTGGAATAAAGAAAATAGAAAGAACAAGAGAGAGAGGGAGAATCGAACGAGAA K R V G I K K I E R T R E R G R I E R E R G L E - R K - K E Q E R E G E S N E K K E G W N K E N R K N K R E R E N R T R . . . . . . 99758 GGGAGAAACAAAGCTTGGAGAAAGATTTGCTTGCTTGATCACTAATCTTCGGTGGAGGTA G R N K A W R K I C L L D H - S S V E V G E T K L G E R F A C L I T N L R W R - R E K Q S L E K D L L A - S L I F G G G . . . . . . 99818 GGTTATGGTTTTCATGCTTTCATAGTAAACTCTTAATAGAGAATGATATGTATTGGTAGT G Y G F H A F I V N S - - R M I C I G S V M V F M L S - - T L N R E - Y V L V V R L W F S C F H S K L L I E N D M Y W - . . . . . . 99878 ATTGTAAACCCTACTATATGCTTAATTGTATGTTTGCGTGAATATGATTATGTGATTGTG I V N P T I C L I V C L R E Y D Y V I V L - T L L Y A - L Y V C V N M I M - L - Y C K P Y Y M L N C M F A - I - L C D C . . . . . . 99938 ATAAGATAAGCATGATTAAAATATTGAATCCCAAATCTTGAAAGGAAACTTTAATATACA I R - A - L K Y - I P N L E R K L - Y T - D K H D - N I E S Q I L K G N F N I H D K I S M I K I L N P K S - K E T L I Y . . . . . . 99998 TTATTAATGATGATGCCTTGGTATAGAAGAAGGCTTGATGAATTAAAGTAATGGGATTGA L L M M M P W Y R R R L D E L K - W D - Y - - - C L G I E E G L M N - S N G I D I I N D D A L V - K K A - - I K V M G L . . . . . . 100058 TGATGCCTTGGAATAGAGAAGGCCTGATGATTTACAGAATGATGTAGGGGACCGGGTGTC - C L G I E K A - - F T E - C R G P G V D A L E - R R P D D L Q N D V G D R V S M M P W N R E G L M I Y R M M - G T G C . . : . . . . 100118 ACGAACCGACAC : AATTAGGGGATCGGGTGTCACGAACCGACACGTAGAATTAGGGGATCG T N R H : N - G I G C H E P T R R I R G S R T D T : I R G S G V T N R H V E L G D R H E P T : Q L G D R V S R T D T - N - G I . . . . . . 100217 GGTGTCACGAACTGACACGTAGAATTAGGGGATCGGGTGTCACAAACCGACACGTAGAAT G V T N - H V E L G D R V S Q T D T - N V S R T D T - N - G I G C H K P T R R I G C H E L T R R I R G S G V T N R H V E . . . . . . 100277 TAGGGGATCGGGTGTCACGAACCGACACGTAGAATTAGGGGATCGGGTGTCACGAACCGA - G I G C H E P T R R I R G S G V T N R R G S G V T N R H V E L G D R V S R T D L G D R V S R T D T - N - G I G C H E P . . . . . . 100337 CACGTAGAATTAGGGGATCGGGTGTCACGAACCGACACGTAGATATAGGGGATCGGAGTG H V E L G D R V S R T D T - I - G I G V T - N - G I G C H E P T R R Y R G S E C T R R I R G S G V T N R H V D I G D R S . . . . . . 100397 TCACGTACCGACACAAGAGGAATAATGAATATGAGGGATCGGAGTGTCACGTACCGACAC S R T D T R G I M N M R D R S V T Y R H H V P T Q E E - - I - G I G V S R T D T V T Y R H K R N N E Y E G S E C H V P T . . . . . . 100457 AAGAGAATTAAAGATAATGAATCTTGAAAGATGTTAATATACTCAATCTAACGAACATAA K R I K D N E S - K M L I Y S I - R T - R E L K I M N L E R C - Y T Q S N E H N Q E N - R - - I L K D V N I L N L T N I . . . . . . 100517 TTCCCAAATGAGTATGGTGTTGAGGCTTGAGCCCTCATGGATGAACTTGATGGTACTTAT F P N E Y G V E A - A L M D E L D G T Y S Q M S M V L R L E P S W M N L M V L I I P K - V W C - G L S P H G - T - W Y L . . . . . . 100577 TGATGATTATAATACTTGTTGTGGCTACATGTTGAATTTTATAGTTGATTTATGATAATA - - L - Y L L W L H V E F Y S - F M I I D D Y N T C C G Y M L N F I V D L - - Y L M I I I L V V A T C - I L - L I Y D N . . . . . . 100637 TTGATATATATTGTCCCCTATTTTGAGTTGGCCGATGATATCTACTGAGTACCCGTGTTT L I Y I V P Y F E L A D D I Y - V P V F - Y I L S P I L S W P M I S T E Y P C F I D I Y C P L F - V G R - Y L L S T R V . . . . . . 100697 TGTACTGACCCCTACTTTTATGTTTTCTTCTTGTTTATTTGTGGAGTGCAGCAAACGTGC C T D P Y F Y V F F L F I C G V Q Q T C V L T P T F M F S S C L F V E C S K R A L Y - P L L L C F L L V Y L W S A A N V . . . . . . 100757 CATCGTCTTCAACTCAACAGTAATTCAAGCCAGTCTTACTACATCGGAAATTCAGGGTGA H R L Q L N S N S S Q S Y Y I G N S G - I V F N S T V I Q A S L T T S E I Q G E P S S S T Q Q - F K P V L L H R K F R V . . . . . . 100817 GCTAATGCTTCTAGCTTGGACTGGATCTCCTTCTTCAAGTCTTGATGCCTTGAACTTCCG A N A S S L D W I S F F K S - C L E L P L M L L A W T G S P S S S L D A L N F R S - C F - L G L D L L L Q V L M P - T S . . . . . . 100877 GCATGGAGTACCTTCTTATGTATTTTTAGCTTTTAGAATACTCTTAGTTTAGTCATTTGA A W S T F L C I F S F - N T L S L V I - H G V P S Y V F L A F R I L L V - S F D G M E Y L L M Y F - L L E Y S - F S H L . . . . . . 100937 TCGTAGATGTTCTTGTGATGATGACTTCCAGGTTTTGGGAATAATAGATGTTTAATATTG S - M F L - - - L P G F G N N R C L I L R R C S C D D D F Q V L G I I D V - Y - I V D V L V M M T S R F W E - - M F N I . . . . . . 100997 ATAGTTATTGAATTGGTTTTTATTAATGAGTTAAGTCTTGCGCATTACTTTCTGTTGTTA I V I E L V F I N E L S L A H Y F L L L - L L N W F L L M S - V L R I T F C C Y D S Y - I G F Y - - V K S C A L L S V V . . . . . . 101057 TTACATAGAAATGTTAAGGTTTAGATTGGTTGGTTCGCTCACATAGGAGGGTAAGTGTGG L H R N V K V - I G W F A H I G G - V W Y I E M L R F R L V G S L T - E G K C G I T - K C - G L D W L V R S H R R V S V . . . . . 101117 GTGCCAGTCGCAACCCGGTTTGGGTCGTGACAACCCTTTACCAT V P V A T R F G S - Q P F T C Q S Q P G L G R D N P L P G A S R N P V W V V T T L Y H Maximal non-overlapping open reading frames (>= 64 codons): >C10HBa0115K16.1+_PGL-7_AGS-3_PPS_1 (98618 99202) (frame '1'; 582 bp, 194 residues) 1 DSIEKVKSIQ EKLLAAQSRQ KEYADRKVRD LEFMEGEQVL LKVSPMKGVM RFGKRGKLSP 61 RYIGPFEVLK RVGEVAYELA LPPGLSGVHP VFHVSMLKRY HGDGNYIICW DSVLLDENLS 121 YEEEPVAILD REVRKLRSRE IASIKVQWKN RPVEEATWEK EADMRERYIH LFKDSGTPFR 181 PCFPSFDRSG MNDG- >C10HBa0115K16.1+_PGL-7_AGS-3_PPS_2 (99215 99541) (frame '1'; 324 bp, 108 residues) 1 CNDPFSRFER QTLFLEKLAE ATDPTTDHHG HDGPSQGLVS KHLENLKLGT KNRLSELCDG 61 MAGRTVTDPW WKFGSLNSTT TCRTDRRRHD GPSKVAQIPG RVGFLVKF- >C10HBa0115K16.1+_PGL-7_AGS-3_PPS_3 (100641 100928) (frame '2'; 285 bp, 95 residues) 1 YILSPILSWP MISTEYPCFV LTPTFMFSSC LFVECSKRAI VFNSTVIQAS LTTSEIQGEL 61 MLLAWTGSPS SSLDALNFRH GVPSYVFLAF RILLV- AGS-4 (99303 99327,99402 99750) SCR (e 0.840 d 0.000 a 0.641,e 0.835) Exon 1 99303 99327 ( 25 n); score: 0.840 Intron 1 99328 99401 ( 74 n); Pd: 0.000 Pa: 0.641 Exon 2 99402 99750 ( 349 n); score: 0.835 PGS (99303 99327,99402 99750) SGN-E396070- PGS (99303 99327,99402 99750) SGN-E236652- 3-phase translation of AGS-4 (+strand): . . . : . . . 99303 GGCACGACGGACCGTCGCAGGGTCT : GACGGACCGTCACAGACCCGTGGTGGAAATTTGGG G T T D R R R V : - R T V T D P W W K F G A R R T V A G S : D G P S Q T R G G N L G H D G P S Q G L : T D R H R P V V E I W . . . . . . 99437 TCTCTAAACTCTACGACGACCTGCAGGACGGACCGTCGCAGGCACGACGGCCCGTCAAAG S L N S T T T C R T D R R R H D G P S K L - T L R R P A G R T V A G T T A R Q R V S K L Y D D L Q D G P S Q A R R P V K . . . . . . 99497 GTTGCGCAAATCCCAGGCAGAGTCGGATTTCTGGTTAAGTTTTAAGGGACGTTTTTGACT V A Q I P G R V G F L V K F - G T F L T L R K S Q A E S D F W L S F K G R F - L G C A N P R Q S R I S G - V L R D V F D . . . . . . 99557 ATTCTTGCCTTAATTATAAAGTTCGTGGGTTTATATTAATAACTCAAATTCTGGAGGGGT I L A L I I K F V G L Y - - L K F W R G F L P - L - S S W V Y I N N S N S G G V Y S C L N Y K V R G F I L I T Q I L E G . . . . . . 99617 TAAAAGAGGTAACCCTAAGTTAATTAGTGGGGTATTATTGCCATCTTTTATTCTTAATTA - K R - P - V N - W G I I A I F Y S - L K R G N P K L I S G V L L P S F I L N Y L K E V T L S - L V G Y Y C H L L F L I . . . . . . 99677 TATACTAATTAGGGTAAAAGAAAGAGGGTTGGAATAAAGAAAATAGAAAGAACAAGAGAG Y T N - G K R K R V G I K K I E R T R E I L I R V K E R G L E - R K - K E Q E R I Y - L G - K K E G W N K E N R K N K R . . 99737 AGAGGGAGAATCGA R G R I E G E S E R E N R Maximal non-overlapping open reading frames (>= 64 codons): none AGS-5 (99800 100516) SCR (e 0.870) Exon 1 99800 100516 ( 717 n); score: 0.870 PGS (99800 100516) SGN-E349726+ PGS (100054 100179) SGN-E346859+ 3-phase translation of AGS-5 (+strand): . . . . . . 99800 TAATCTTCGGTGGAGGTAGGTTATGGTTTTCATGCTTTCATAGTAAACTCTTAATAGAGA - S S V E V G Y G F H A F I V N S - - R N L R W R - V M V F M L S - - T L N R E I F G G G R L W F S C F H S K L L I E . . . . . . 99860 ATGATATGTATTGGTAGTATTGTAAACCCTACTATATGCTTAATTGTATGTTTGCGTGAA M I C I G S I V N P T I C L I V C L R E - Y V L V V L - T L L Y A - L Y V C V N N D M Y W - Y C K P Y Y M L N C M F A - . . . . . . 99920 TATGATTATGTGATTGTGATAAGATAAGCATGATTAAAATATTGAATCCCAAATCTTGAA Y D Y V I V I R - A - L K Y - I P N L E M I M - L - - D K H D - N I E S Q I L K I - L C D C D K I S M I K I L N P K S - . . . . . . 99980 AGGAAACTTTAATATACATTATTAATGATGATGCCTTGGTATAGAAGAAGGCTTGATGAA R K L - Y T L L M M M P W Y R R R L D E G N F N I H Y - - - C L G I E E G L M N K E T L I Y I I N D D A L V - K K A - - . . . . . . 100040 TTAAAGTAATGGGATTGATGATGCCTTGGAATAGAGAAGGCCTGATGATTTACAGAATGA L K - W D - - C L G I E K A - - F T E - - S N G I D D A L E - R R P D D L Q N D I K V M G L M M P W N R E G L M I Y R M . . . . . . 100100 TGTAGGGGACCGGGTGTCACGAACCGACACGTAGAATTAGGGGATCGGGTGTCACGAACC C R G P G V T N R H V E L G D R V S R T V G D R V S R T D T - N - G I G C H E P M - G T G C H E P T R R I R G S G V T N . . . . . . 100160 GACACGTAGAATTAGGGGATCGGGTGTCACGAACCGACACGTAGAATTAGGGGATCGGGT D T - N - G I G C H E P T R R I R G S G T R R I R G S G V T N R H V E L G D R V R H V E L G D R V S R T D T - N - G I G . . . . . . 100220 GTCACGAACTGACACGTAGAATTAGGGGATCGGGTGTCACAAACCGACACGTAGAATTAG V T N - H V E L G D R V S Q T D T - N - S R T D T - N - G I G C H K P T R R I R C H E L T R R I R G S G V T N R H V E L . . . . . . 100280 GGGATCGGGTGTCACGAACCGACACGTAGAATTAGGGGATCGGGTGTCACGAACCGACAC G I G C H E P T R R I R G S G V T N R H G S G V T N R H V E L G D R V S R T D T G D R V S R T D T - N - G I G C H E P T . . . . . . 100340 GTAGAATTAGGGGATCGGGTGTCACGAACCGACACGTAGATATAGGGGATCGGAGTGTCA V E L G D R V S R T D T - I - G I G V S - N - G I G C H E P T R R Y R G S E C H R R I R G S G V T N R H V D I G D R S V . . . . . . 100400 CGTACCGACACAAGAGGAATAATGAATATGAGGGATCGGAGTGTCACGTACCGACACAAG R T D T R G I M N M R D R S V T Y R H K V P T Q E E - - I - G I G V S R T D T R T Y R H K R N N E Y E G S E C H V P T Q . . . . . . 100460 AGAATTAAAGATAATGAATCTTGAAAGATGTTAATATACTCAATCTAACGAACATAA R I K D N E S - K M L I Y S I - R T - E L K I M N L E R C - Y T Q S N E H E N - R - - I L K D V N I L N L T N I Maximal non-overlapping open reading frames (>= 64 codons): none 3-phase translation of AGS-5 (-strand): . . . . . . 100516 TTATGTTCGTTAGATTGAGTATATTAACATCTTTCAAGATTCATTATCTTTAATTCTCTT L C S L D - V Y - H L S R F I I F N S L Y V R - I E Y I N I F Q D S L S L I L L M F V R L S I L T S F K I H Y L - F S . . . . . . 100456 GTGTCGGTACGTGACACTCCGATCCCTCATATTCATTATTCCTCTTGTGTCGGTACGTGA V S V R D T P I P H I H Y S S C V G T - C R Y V T L R S L I F I I P L V S V R D C V G T - H S D P S Y S L F L L C R Y V . . . . . . 100396 CACTCCGATCCCCTATATCTACGTGTCGGTTCGTGACACCCGATCCCCTAATTCTACGTG H S D P L Y L R V G S - H P I P - F Y V T P I P Y I Y V S V R D T R S P N S T C T L R S P I S T C R F V T P D P L I L R . . . . . . 100336 TCGGTTCGTGACACCCGATCCCCTAATTCTACGTGTCGGTTCGTGACACCCGATCCCCTA S V R D T R S P N S T C R F V T P D P L R F V T P D P L I L R V G S - H P I P - V G S - H P I P - F Y V S V R D T R S P . . . . . . 100276 ATTCTACGTGTCGGTTTGTGACACCCGATCCCCTAATTCTACGTGTCAGTTCGTGACACC I L R V G L - H P I P - F Y V S V R D T F Y V S V C D T R S P N S T C Q F V T P N S T C R F V T P D P L I L R V S S - H . . . . . . 100216 CGATCCCCTAATTCTACGTGTCGGTTCGTGACACCCGATCCCCTAATTCTACGTGTCGGT R S P N S T C R F V T P D P L I L R V G D P L I L R V G S - H P I P - F Y V S V P I P - F Y V S V R D T R S P N S T C R . . . . . . 100156 TCGTGACACCCGATCCCCTAATTCTACGTGTCGGTTCGTGACACCCGGTCCCCTACATCA S - H P I P - F Y V S V R D T R S P T S R D T R S P N S T C R F V T P G P L H H F V T P D P L I L R V G S - H P V P Y I . . . . . . 100096 TTCTGTAAATCATCAGGCCTTCTCTATTCCAAGGCATCATCAATCCCATTACTTTAATTC F C K S S G L L Y S K A S S I P L L - F S V N H Q A F S I P R H H Q S H Y F N S I L - I I R P S L F Q G I I N P I T L I . . . . . . 100036 ATCAAGCCTTCTTCTATACCAAGGCATCATCATTAATAATGTATATTAAAGTTTCCTTTC I K P S S I P R H H H - - C I L K F P F S S L L L Y Q G I I I N N V Y - S F L S H Q A F F Y T K A S S L I M Y I K V S F . . . . . . 99976 AAGATTTGGGATTCAATATTTTAATCATGCTTATCTTATCACAATCACATAATCATATTC K I W D S I F - S C L S Y H N H I I I F R F G I Q Y F N H A Y L I T I T - S Y S Q D L G F N I L I M L I L S Q S H N H I . . . . . . 99916 ACGCAAACATACAATTAAGCATATAGTAGGGTTTACAATACTACCAATACATATCATTCT T Q T Y N - A Y S R V Y N T T N T Y H S R K H T I K H I V G F T I L P I H I I L H A N I Q L S I - - G L Q Y Y Q Y I S F . . . . . . 99856 CTATTAAGAGTTTACTATGAAAGCATGAAAACCATAACCTACCTCCACCGAAGATTA L L R V Y Y E S M K T I T Y L H R R L Y - E F T M K A - K P - P T S T E D S I K S L L - K H E N H N L P P P K I Maximal non-overlapping open reading frames (>= 64 codons): >C10HBa0115K16.1-_PGL-7_AGS-5_PPS_1 (100503 100291) (frame '2'; 210 bp, 70 residues) 1 IEYINIFQDS LSLILLCRYV TLRSLIFIIP LVSVRDTPIP YIYVSVRDTR SPNSTCRFVT 61 PDPLILRVGS - >C10HBa0115K16.1-_PGL-7_AGS-5_PPS_2 (100088 99891) (frame '0'; 195 bp, 65 residues) 1 IIRPSLFQGI INPITLIHQA FFYTKASSLI MYIKVSFQDL GFNILIMLIL SQSHNHIHAN 61 IQLSI- AGS-6 (99800 100099,100204 100304) SCR (e 0.813 d 0.000 a 0.000,e 0.950) Exon 1 99800 100099 ( 300 n); score: 0.813 Intron 1 100100 100203 ( 104 n); Pd: 0.000 Pa: 0.000 Exon 2 100204 100304 ( 101 n); score: 0.950 PGS (99800 100099,100204 100304) SGN-E357559+ 3-phase translation of AGS-6 (+strand): . . . . . . 99800 TAATCTTCGGTGGAGGTAGGTTATGGTTTTCATGCTTTCATAGTAAACTCTTAATAGAGA - S S V E V G Y G F H A F I V N S - - R N L R W R - V M V F M L S - - T L N R E I F G G G R L W F S C F H S K L L I E . . . . . . 99860 ATGATATGTATTGGTAGTATTGTAAACCCTACTATATGCTTAATTGTATGTTTGCGTGAA M I C I G S I V N P T I C L I V C L R E - Y V L V V L - T L L Y A - L Y V C V N N D M Y W - Y C K P Y Y M L N C M F A - . . . . . . 99920 TATGATTATGTGATTGTGATAAGATAAGCATGATTAAAATATTGAATCCCAAATCTTGAA Y D Y V I V I R - A - L K Y - I P N L E M I M - L - - D K H D - N I E S Q I L K I - L C D C D K I S M I K I L N P K S - . . . . . . 99980 AGGAAACTTTAATATACATTATTAATGATGATGCCTTGGTATAGAAGAAGGCTTGATGAA R K L - Y T L L M M M P W Y R R R L D E G N F N I H Y - - - C L G I E E G L M N K E T L I Y I I N D D A L V - K K A - - . . . . . . : 100040 TTAAAGTAATGGGATTGATGATGCCTTGGAATAGAGAAGGCCTGATGATTTACAGAATGA : L K - W D - - C L G I E K A - - F T E - : - S N G I D D A L E - R R P D D L Q N E : I K V M G L M M P W N R E G L M I Y R M : . . . . . . 100204 AATTAGGGGATCGGGTGTCACGAACTGACACGTAGAATTAGGGGATCGGGTGTCACAAAC N - G I G C H E L T R R I R G S G V T N I R G S G V T N - H V E L G D R V S Q T K L G D R V S R T D T - N - G I G C H K . . . . . 100264 CGACACGTAGAATTAGGGGATCGGGTGTCACGAACCGACAC R H V E L G D R V S R T D D T - N - G I G C H E P T P T R R I R G S G V T N R H Maximal non-overlapping open reading frames (>= 64 codons): none AGS-7 (99998 100052,100170 100350,100432 100840) SCR (e 0.873 d 0.000 a 0.000,e 0.906 d 0.000 a 0.000,e 0.806) Exon 1 99998 100052 ( 55 n); score: 0.873 Intron 1 100053 100169 ( 117 n); Pd: 0.000 Pa: 0.000 Exon 2 100170 100350 ( 181 n); score: 0.906 Intron 2 100351 100431 ( 81 n); Pd: 0.000 Pa: 0.000 Exon 3 100432 100840 ( 409 n); score: 0.806 PGS (99998 100052,100170 100350,100432 100840) SGN-E241789- 3-phase translation of AGS-7 (+strand): . . . . . . : 99998 TTATTAATGATGATGCCTTGGTATAGAAGAAGGCTTGATGAATTAAAGTAATGGG : ATTAG L L M M M P W Y R R R L D E L K - W : D - Y - - - C L G I E E G L M N - S N G : I R I N D D A L V - K K A - - I K V M G : L . . . . . . 100175 GGGATCGGGTGTCACGAACCGACACGTAGAATTAGGGGATCGGGTGTCACGAACTGACAC G I G C H E P T R R I R G S G V T N - H G S G V T N R H V E L G D R V S R T D T G D R V S R T D T - N - G I G C H E L T . . . . . . 100235 GTAGAATTAGGGGATCGGGTGTCACAAACCGACACGTAGAATTAGGGGATCGGGTGTCAC V E L G D R V S Q T D T - N - G I G C H - N - G I G C H K P T R R I R G S G V T R R I R G S G V T N R H V E L G D R V S . . . . . . : 100295 GAACCGACACGTAGAATTAGGGGATCGGGTGTCACGAACCGACACGTAGAATTAGG : GGAT E P T R R I R G S G V T N R H V E L G : D N R H V E L G D R V S R T D T - N - : G I R T D T - N - G I G C H E P T R R I R : G . . . . . . 100436 CGGAGTGTCACGTACCGACACAAGAGAATTAAAGATAATGAATCTTGAAAGATGTTAATA R S V T Y R H K R I K D N E S - K M L I G V S R T D T R E L K I M N L E R C - Y S E C H V P T Q E N - R - - I L K D V N . . . . . . 100496 TACTCAATCTAACGAACATAATTCCCAAATGAGTATGGTGTTGAGGCTTGAGCCCTCATG Y S I - R T - F P N E Y G V E A - A L M T Q S N E H N S Q M S M V L R L E P S W I L N L T N I I P K - V W C - G L S P H . . . . . . 100556 GATGAACTTGATGGTACTTATTGATGATTATAATACTTGTTGTGGCTACATGTTGAATTT D E L D G T Y - - L - Y L L W L H V E F M N L M V L I D D Y N T C C G Y M L N F G - T - W Y L L M I I I L V V A T C - I . . . . . . 100616 TATAGTTGATTTATGATAATATTGATATATATTGTCCCCTATTTTGAGTTGGCCGATGAT Y S - F M I I L I Y I V P Y F E L A D D I V D L - - Y - Y I L S P I L S W P M I L - L I Y D N I D I Y C P L F - V G R - . . . . . . 100676 ATCTACTGAGTACCCGTGTTTTGTACTGACCCCTACTTTTATGTTTTCTTCTTGTTTATT I Y - V P V F C T D P Y F Y V F F L F I S T E Y P C F V L T P T F M F S S C L F Y L L S T R V L Y - P L L L C F L L V Y . . . . . . 100736 TGTGGAGTGCAGCAAACGTGCCATCGTCTTCAACTCAACAGTAATTCAAGCCAGTCTTAC C G V Q Q T C H R L Q L N S N S S Q S Y V E C S K R A I V F N S T V I Q A S L T L W S A A N V P S S S T Q Q - F K P V L . . . . . 100796 TACATCGGAAATTCAGGGTGAGCTAATGCTTCTAGCTTGGACTGG Y I G N S G - A N A S S L D W T S E I Q G E L M L L A W T L H R K F R V S - C F - L G L Maximal non-overlapping open reading frames (>= 64 codons): >C10HBa0115K16.1+_PGL-7_AGS-7_PPS_1 (100641 100838) (frame '2'; 198 bp, 66 residues) 1 YILSPILSWP MISTEYPCFV LTPTFMFSSC LFVECSKRAI VFNSTVIQAS LTTSEIQGEL 61 MLLAWT AGS-8 (100201 100239,100271 100682) SCR (e 0.705 d 0.000 a 0.000,e 0.706) Exon 1 100201 100239 ( 39 n); score: 0.705 Intron 1 100240 100270 ( 31 n); Pd: 0.000 Pa: 0.000 Exon 2 100271 100682 ( 412 n); score: 0.706 PGS (100201 100239,100271 100682) SGN-E349977+ 3-phase translation of AGS-8 (+strand): . . . . : . . 100201 TAGAATTAGGGGATCGGGTGTCACGAACTGACACGTAGA : TAGAATTAGGGGATCGGGTGT - N - G I G C H E L T R R : - N - G I G C R I R G S G V T N - H V D : R I R G S G V E L G D R V S R T D T - : I E L G D R V . . . . . . 100292 CACGAACCGACACGTAGAATTAGGGGATCGGGTGTCACGAACCGACACGTAGAATTAGGG H E P T R R I R G S G V T N R H V E L G T N R H V E L G D R V S R T D T - N - G S R T D T - N - G I G C H E P T R R I R . . . . . . 100352 GATCGGGTGTCACGAACCGACACGTAGATATAGGGGATCGGAGTGTCACGTACCGACACA D R V S R T D T - I - G I G V S R T D T I G C H E P T R R Y R G S E C H V P T Q G S G V T N R H V D I G D R S V T Y R H . . . . . . 100412 AGAGGAATAATGAATATGAGGGATCGGAGTGTCACGTACCGACACAAGAGAATTAAAGAT R G I M N M R D R S V T Y R H K R I K D E E - - I - G I G V S R T D T R E L K I K R N N E Y E G S E C H V P T Q E N - R . . . . . . 100472 AATGAATCTTGAAAGATGTTAATATACTCAATCTAACGAACATAATTCCCAAATGAGTAT N E S - K M L I Y S I - R T - F P N E Y M N L E R C - Y T Q S N E H N S Q M S M - - I L K D V N I L N L T N I I P K - V . . . . . . 100532 GGTGTTGAGGCTTGAGCCCTCATGGATGAACTTGATGGTACTTATTGATGATTATAATAC G V E A - A L M D E L D G T Y - - L - Y V L R L E P S W M N L M V L I D D Y N T W C - G L S P H G - T - W Y L L M I I I . . . . . . 100592 TTGTTGTGGCTACATGTTGAATTTTATAGTTGATTTATGATAATATTGATATATATTGTC L L W L H V E F Y S - F M I I L I Y I V C C G Y M L N F I V D L - - Y - Y I L S L V V A T C - I L - L I Y D N I D I Y C . . . . 100652 CCCTATTTTGAGTTGGCCGATGATATCTACT P Y F E L A D D I Y P I L S W P M I S T P L F - V G R - Y L Maximal non-overlapping open reading frames (>= 64 codons): none PGL 8 (+ strand): 106429 107866 AGS-1 (106429 107001,107143 107866) SCR (e 0.873 d 0.997 a 0.000,e 0.733) Exon 1 106429 107001 ( 573 n); score: 0.873 Intron 1 107002 107142 ( 141 n); Pd: 0.997 Pa: 0.000 Exon 2 107143 107866 ( 724 n); score: 0.733 PGS (106429 107001,107143 107376) SGN-E543334+ PGS (106864 107001,107143 107645) SGN-E353367- PGS (106961 107001,107143 107866) SGN-E548861- PGS (107440 107866) SGN-E303196- 3-phase translation of AGS-1 (+strand): . . . . . . 106429 AATCTCTTTCGTTTTAAAGTAAAAGGAAATACTAAGTCTCAATCTCATCGTCTTAGGACA N L F R F K V K G N T K S Q S H R L R T I S F V L K - K E I L S L N L I V L G H S L S F - S K R K Y - V S I S S S - D . . . . . . 106489 CAAGAATACTTGGGACACGGACCATACTTCAAAATATGAATATAGAAATACTTAGTCTAT Q E Y L G H G P Y F K I - I - K Y L V Y K N T W D T D H T S K Y E Y R N T - S I T R I L G T R T I L Q N M N I E I L S L . . . . . . 106549 TACAATACTTTGAATGAAAACATAAAAGACATATATATGCCCTCGAGTCAAGTGAGGACA Y N T L N E N I K D I Y M P S S Q V R T T I L - M K T - K T Y I C P R V K - G H L Q Y F E - K H K R H I Y A L E S S E D . . . . . . 106609 TACTTCAACTTCACTTGAACGATCTTCTAAGTCCAAGCCTTCACTTCTCAAAGCTCCTCA Y F N F T - T I F - V Q A F T S Q S S S T S T S L E R S S K S K P S L L K A P H I L Q L H L N D L L S P S L H F S K L L . . . . . . 106669 CCTACCAAGAACTATATAGATAAAAGCATGGAAATAGTACAACCACATGTACTAAGTATG P T K N Y I D K S M E I V Q P H V L S M L P R T I - I K A W K - Y N H M Y - V W T Y Q E L Y R - K H G N S T T T C T K Y . . . . . . 106729 GCTTATGCATAAAAATCATGAAAACGGACTTTATTGGAAATATGCCTCTTTTCATTTAAA A Y A - K S - K R T L L E I C L F S F K L M H K N H E N G L Y W K Y A S F H L K G L C I K I M K T D F I G N M P L F I - . . . . . . 106789 ATCATATTATAATCATAATAACATCATAAATCAATTTAGAAACACATAAGATACTTCTAG I I L - S - - H H K S I - K H I R Y F - S Y Y N H N N I I N Q F R N T - D T S S N H I I I I I T S - I N L E T H K I L L . . . . . . 106849 CATGTAATTTCCTCACTTAAAGTCATCCTAAGATTCACTTGAGTGACAGAAAGAGAGACC H V I S S L K V I L R F T - V T E R E T M - F P H L K S S - D S L E - Q K E R P A C N F L T - S H P K I H L S D R K R D . . . . . . 106909 GCTCATACACTCTCTCTAGATGTGCCTAAACGACCCTTAAGATTACCTTTAATGATTCAC A H T L S L D V P K R P L R L P L M I H L I H S L - M C L N D P - D Y L - - F T R S Y T L S R C A - T T L K I T F N D S . . . . : . . 106969 ATACATACTTACAAAGCAATCATAAACATCAAG : ACATAGATGATATGACATTCTCTTTCC I H T Y K A I I N I K : T - M I - H S L S Y I L T K Q S - T S R : H R - Y D I L F P H T Y L Q S N H K H Q : D I D D M T F S F . . . . . . 107170 AAAGGCTATCAAAATACCTACTTAAGTAAATGAAGAAGATAACATACATAGTGACCTCTT K G Y Q N T Y L S K - R R - H T - - P L K A I K I P T - V N E E D N I H S D L F Q R L S K Y L L K - M K K I T Y I V T S . . . . . . 107230 CAAGATTACCTAAATAATCCTTAAAACAACGTAAGGCTTAAAATATGTCCACAAAATCAA Q D Y L N N P - N N V R L K I C P Q N Q K I T - I I L K T T - G L K Y V H K I N S R L P K - S L K Q R K A - N M S T K S . . . . . . 107290 CAAAATTCCCTAACTAGAGTCATACTCAAGACTTCCAAAGATAAGACATGAAGAGATTAT Q N S L T R V I L K T S K D K T - R D Y K I P - L E S Y S R L P K I R H E E I I T K F P N - S H T Q D F Q R - D M K R L . . . . . . 107350 CCCTTATGCCCTCTTCACACTTTAGCTAATAAATCCTTAAGTCACTTTAGATTAGGTACT P L C P L H T L A N K S L S H F R L G T P Y A L F T L - L I N P - V T L D - V L S L M P S S H F S - - I L K S L - I R Y . . . . . . 107410 CATTTATTTACGTACTCCTTAACATAAATTATTAGTTCATTAGTTCATTAAGGCACATAC H L F T Y S L T - I I S S L V H - G T Y I Y L R T P - H K L L V H - F I K A H T S F I Y V L L N I N Y - F I S S L R H I . . . . . . 107470 ATCACATAAAGGACATTCTAGGAATGGTCTTGAACAAGACCTAGGAACTTCAAATAACAC I T - R T F - E W S - T R P R N F K - H S H K G H S R N G L E Q D L G T S N N T H H I K D I L G M V L N K T - E L Q I T . . . . . . 107530 CTTTAAAGTCTATTGTGCAATGTCTAGATAGCGTCCCATATCACCACCTAAACTCCATCC L - S L L C N V - I A S H I T T - T P S F K V Y C A M S R - R P I S P P K L H P P L K S I V Q C L D S V P Y H H L N S I . . . . . . 107590 ACTCCTCAAATGCTAATAGGTATTCCATATGATGAGAATAGGCAATAACCGACATAATCC T P Q M L I G I P Y D E N R Q - P T - S L L K C - - V F H M M R I G N N R H N P H S S N A N R Y S I - - E - A I T D I I . . . . . . 107650 GAAGTTCTATCCTACTCCGATGAGGTTGTTCTACTTGTCAATGGTAGAACTTGAACACAT E V L S Y S D E V V L L V N G R T - T H K F Y P T P M R L F Y L S M V E L E H I R S S I L L R - G C S T C Q W - N L N T . . . . . . 107710 CCCATGTAGGCACATGGTTAAGGAATATGAAGGACTTATTTGTATTCTAGTCTCATACTT P M - A H G - G I - R T Y L Y S S L I L P C R H M V K E Y E G L I C I L V S Y L S H V G T W L R N M K D L F V F - S H T . . . . . . 107770 AACTAGAATTACTTTCCCTTATTATACTAACTCGGTGCTAGCCTTAGTTCTCATAGAGTA N - N Y F P L L Y - L G A S L S S H R V T R I T F P Y Y T N S V L A L V L I E - - L E L L S L I I L T R C - P - F S - S . . . . 107830 ATTCATACATTAGGTTCACATAAAAGAGTTCCATAAC I H T L G S H K R V P - F I H - V H I K E F H N N S Y I R F T - K S S I Maximal non-overlapping open reading frames (>= 64 codons): >C10HBa0115K16.1+_PGL-8_AGS-1_PPS_1 (107609 107830) (frame '2'; 219 bp, 73 residues) 1 VFHMMRIGNN RHNPKFYPTP MRLFYLSMVE LEHIPCRHMV KEYEGLICIL VSYLTRITFP 61 YYTNSVLALV LIE- PGL 9 (- strand): 113128 112789 AGS-1 (113128 112789) SCR (e 0.790) Exon 1 113128 112789 ( 340 n); score: 0.790 PGS (113128 112789) SGN-E547215+ 3-phase translation of AGS-1 (-strand): . . . . . . 113128 GTGGGAGAGGATCCGCAAGAGTTTCTAGATGGTGTCTATAAGGTGTTGAGTGCTATGGGA V G E D P Q E F L D G V Y K V L S A M G W E R I R K S F - M V S I R C - V L W E G R G S A R V S R W C L - G V E C Y G . . . . . . 113068 GTGACTTCTAGGGTGAAGAGGGAGTTAGCTTCATACCAATTGAGGGTAGATGCTCAAGTA V T S R V K R E L A S Y Q L R V D A Q V - L L G - R G S - L H T N - G - M L K Y S D F - G E E G V S F I P I E G R C S S . . . . . . 113008 TGGTACACTCAATGGAAAGACAATAGGCCGGTTGAGTCGGGTCCTATAGAATGAGAAGAG W Y T Q W K D N R P V E S G P I E - E E G T L N G K T I G R L S R V L - N E K R M V H S M E R Q - A G - V G S Y R M R R . . . . . . 112948 GTTAAGGAAACTTTCTTAGGAATGTACTTTCCCATGAAAAGAGGGAGGTGAAGGTTGAGA V K E T F L G M Y F P M K R G R - R L R L R K L S - E C T F P - K E G G E G - E G - G N F L R N V L S H E K R E V K V E . . . . . . 112888 AGTTTATAAACCTTAGGCAAGGTAACATGAGTGTTGAAGAGTATTTGAAGTTTACCCTAT S L - T L G K V T - V L K S I - S L P Y V Y K P - A R - H E C - R V F E V Y P I K F I N L R Q G N M S V E E Y L K F T L . . . . 112828 TGTCTAAGTATTCTCCATCCTTGGTGTCTAACCCTAGGGA C L S I L H P W C L T L G V - V F S I L G V - P - G L S K Y S P S L V S N P R Maximal non-overlapping open reading frames (>= 64 codons): none 3-phase translation of AGS-1 (+strand): . . . . . . 112789 TCCCTAGGGTTAGACACCAAGGATGGAGAATACTTAGACAATAGGGTAAACTTCAAATAC S L G L D T K D G E Y L D N R V N F K Y P - G - T P R M E N T - T I G - T S N T P R V R H Q G W R I L R Q - G K L Q I . . . . . . 112849 TCTTCAACACTCATGTTACCTTGCCTAAGGTTTATAAACTTCTCAACCTTCACCTCCCTC S S T L M L P C L R F I N F S T F T S L L Q H S C Y L A - G L - T S Q P S P P S L F N T H V T L P K V Y K L L N L H L P . . . . . . 112909 TTTTCATGGGAAAGTACATTCCTAAGAAAGTTTCCTTAACCTCTTCTCATTCTATAGGAC F S W E S T F L R K F P - P L L I L - D F H G K V H S - E S F L N L F S F Y R T L F M G K Y I P K K V S L T S S H S I G . . . . . . 112969 CCGACTCAACCGGCCTATTGTCTTTCCATTGAGTGTACCATACTTGAGCATCTACCCTCA P T Q P A Y C L S I E C T I L E H L P S R L N R P I V F P L S V P Y L S I Y P Q P D S T G L L S F H - V Y H T - A S T L . . . . . . 113029 ATTGGTATGAAGCTAACTCCCTCTTCACCCTAGAAGTCACTCCCATAGCACTCAACACCT I G M K L T P S S P - K S L P - H S T P L V - S - L P L H P R S H S H S T Q H L N W Y E A N S L F T L E V T P I A L N T . . . . 113089 TATAGACACCATCTAGAAACTCTTGCGGATCCTCTCCCAC Y R H H L E T L A D P L P I D T I - K L L R I L S H L - T P S R N S C G S S P Maximal non-overlapping open reading frames (>= 64 codons): none PGL 10 (- strand): 121600 120136 AGS-1 (120841 120136) SCR (e 0.932) Exon 1 120841 120136 ( 706 n); score: 0.932 PGS (120541 120136) SGN-E578039+ PGS (120657 120162) SGN-E540293+ PGS (120657 120162) SGN-E286708+ PGS (120653 120162) SGN-E346859- PGS (120534 120162) SGN-E577891+ PGS (120695 120173) SGN-E243969+ PGS (120841 120253) SGN-E369291- PGS (120802 120253) SGN-E261921- PGS (120653 120253) SGN-E258752- PGS (120653 120253) SGN-E322644- PGS (120632 120253) SGN-E255290- PGS (120572 120253) SGN-E258181- PGS (120841 120259) SGN-E369290+ PGS (120497 120259) SGN-E546250+ PGS (120488 120259) SGN-E546251- PGS (120800 120261) SGN-E546025+ 3-phase translation of AGS-1 (-strand): . . . . . . 120841 TGTAAGAATCTCCAAAAAATCAAACACTAATAAACAAAGTCTAATAATATGATGTCTAAT C K N L Q K I K H - - T K S N N M M S N V R I S K K S N T N K Q S L I I - C L I - E S P K N Q T L I N K V - - Y D V - . . . . . . 120781 CTCCCAGAGTCTAACCTCAAAAATGAGGTTTTTCGAACTATTTATAAAAAAATAAAAACC L P E S N L K N E V F R T I Y K K I K T S Q S L T S K M R F F E L F I K K - K P S P R V - P Q K - G F S N Y L - K N K N . . . . . . 120721 TAATTAAAGAAGGATTCTAAATTACTGGAAATCTGCCAAAACGCGGCTGGGTCGACGGAC - L K K D S K L L E I C Q N A A G S T D N - R R I L N Y W K S A K T R L G R R T L I K E G F - I T G N L P K R G W V D G . . . . . . 120661 CACGCGACGGACCGTCGTGGACTCCGTCGTCCCATACTTGGTGCAATTTTCTTCTGTTGC H A T D R R G L R R P I L G A I F F C C T R R T V V D S V V P Y L V Q F S S V A P R D G P S W T P S S H T W C N F L L L . . . . . . 120601 TTTCTTCATTCCCCTCGACGGCAAGTGTGACGGACCGTCATTAGGCACAACGGTCCGTCA F L H S P R R Q V - R T V I R H N G P S F F I P L D G K C D G P S L G T T V R Q L S S F P S T A S V T D R H - A Q R S V . . . . . . 120541 GAGGGTCTCGTTTCAAAATACTTCAACTCTTGAAATCTGGGTACTGGGATCACTTCTCTG E G L V S K Y F N S - N L G T G I T S L R V S F Q N T S T L E I W V L G S L L - R G S R F K I L Q L L K S G Y W D H F S . . . . . . 120481 ATCTTCACGACGAACCTGCAGGACGGACCGTCATAGCCATGACGGGACCGTCGCAAGCTT I F T T N L Q D G P S - P - R D R R K L S S R R T C R T D R H S H D G T V A S F D L H D E P A G R T V I A M T G P S Q A . . . . . . 120421 CGTAATGCCACACTTGGTCAGACTTCCCCATCTTCCTTCAGCAGCTTCGCTACGCTGCCA R N A T L G Q T S P S S F S S F A T L P V M P H L V R L P H L P S A A S L R C H S - C H T W S D F P I F L Q Q L R Y A A . . . . . . 120361 CCTACGGACCGTCACAGGCACGACGGACCATCATAAGCTCCGTAGGTGGTCTCTTCTGCA P T D R H R H D G P S - A P - V V S S A L R T V T G T T D H H K L R R W S L L H T Y G P S Q A R R T I I S S V G G L F C . . . . . . 120301 TTTTCGCTCAAAATCTCCGCATTCAGCTTTGGACAGATTTCCTGCAAAACAAAGAGCAAT F S L K I S A F S F G Q I S C K T K S N F R S K S P H S A L D R F P A K Q R A I I F A Q N L R I Q L W T D F L Q N K E Q . . . . . . 120241 TTATATCAAAATTAGCACAAAAAAGACTTTCGGACACACTAAACTTAAGGAAAAAGTATT L Y Q N - H K K D F R T H - T - G K S I Y I K I S T K K T F G H T K L K E K V L F I S K L A Q K R L S D T L N L R K K Y . . . . . 120181 AATTATACCGTGAAACCACGGTATATCACCTCTCTCAATTTTTCTT N Y T V K P R Y I T S L N F S I I P - N H G I S P L S I F L - L Y R E T T V Y H L S Q F F Maximal non-overlapping open reading frames (>= 64 codons): >C10HBa0115K16.1-_PGL-10_AGS-1_PPS_1 (120480 120169) (frame '2'; 309 bp, 103 residues) 1 SSRRTCRTDR HSHDGTVASF VMPHLVRLPH LPSAASLRCH LRTVTGTTDH HKLRRWSLLH 61 FRSKSPHSAL DRFPAKQRAI YIKISTKKTF GHTKLKEKVL IIP- >C10HBa0115K16.1-_PGL-10_AGS-1_PPS_2 (120714 120481) (frame '2'; 231 bp, 77 residues) 1 RRILNYWKSA KTRLGRRTTR RTVVDSVVPY LVQFSSVAFF IPLDGKCDGP SLGTTVRQRV 61 SFQNTSTLEI WVLGSLL- 3-phase translation of AGS-1 (+strand): . . . . . . 120136 AAGAAAAATTGAGAGAGGTGATATACCGTGGTTTCACGGTATAATTAATACTTTTTCCTT K K N - E R - Y T V V S R Y N - Y F F L R K I E R G D I P W F H G I I N T F S L E K L R E V I Y R G F T V - L I L F P . . . . . . 120196 AAGTTTAGTGTGTCCGAAAGTCTTTTTTGTGCTAATTTTGATATAAATTGCTCTTTGTTT K F S V S E S L F C A N F D I N C S L F S L V C P K V F F V L I L I - I A L C F - V - C V R K S F L C - F - Y K L L F V . . . . . . 120256 TGCAGGAAATCTGTCCAAAGCTGAATGCGGAGATTTTGAGCGAAAATGCAGAAGAGACCA C R K S V Q S - M R R F - A K M Q K R P A G N L S K A E C G D F E R K C R R D H L Q E I C P K L N A E I L S E N A E E T . . . . . . 120316 CCTACGGAGCTTATGATGGTCCGTCGTGCCTGTGACGGTCCGTAGGTGGCAGCGTAGCGA P T E L M M V R R A C D G P - V A A - R L R S L - W S V V P V T V R R W Q R S E T Y G A Y D G P S C L - R S V G G S V A . . . . . . 120376 AGCTGCTGAAGGAAGATGGGGAAGTCTGACCAAGTGTGGCATTACGAAGCTTGCGACGGT S C - R K M G K S D Q V W H Y E A C D G A A E G R W G S L T K C G I T K L A T V K L L K E D G E V - P S V A L R S L R R . . . . . . 120436 CCCGTCATGGCTATGACGGTCCGTCCTGCAGGTTCGTCGTGAAGATCAGAGAAGTGATCC P V M A M T V R P A G S S - R S E K - S P S W L - R S V L Q V R R E D Q R S D P S R H G Y D G P S C R F V V K I R E V I . . . . . . 120496 CAGTACCCAGATTTCAAGAGTTGAAGTATTTTGAAACGAGACCCTCTGACGGACCGTTGT Q Y P D F K S - S I L K R D P L T D R C S T Q I S R V E V F - N E T L - R T V V P V P R F Q E L K Y F E T R P S D G P L . . . . . . 120556 GCCTAATGACGGTCCGTCACACTTGCCGTCGAGGGGAATGAAGAAAGCAACAGAAGAAAA A - - R S V T L A V E G N E E S N R R K P N D G P S H L P S R G M K K A T E E N C L M T V R H T C R R G E - R K Q Q K K . . . . . . 120616 TTGCACCAAGTATGGGACGACGGAGTCCACGACGGTCCGTCGCGTGGTCCGTCGACCCAG L H Q V W D D G V H D G P S R G P S T Q C T K Y G T T E S T T V R R V V R R P S I A P S M G R R S P R R S V A W S V D P . . . . . . 120676 CCGCGTTTTGGCAGATTTCCAGTAATTTAGAATCCTTCTTTAATTAGGTTTTTATTTTTT P R F G R F P V I - N P S L I R F L F F R V L A D F Q - F R I L L - L G F Y F F A A F W Q I S S N L E S F F N - V F I F . . . . . . 120736 TATAAATAGTTCGAAAAACCTCATTTTTGAGGTTAGACTCTGGGAGATTAGACATCATAT Y K - F E K P H F - G - T L G D - T S Y I N S S K N L I F E V R L W E I R H H I L - I V R K T S F L R L D S G R L D I I . . . . . 120796 TATTAGACTTTGTTTATTAGTGTTTGATTTTTTGGAGATTCTTACA Y - T L F I S V - F F G D S Y I R L C L L V F D F L E I L T L L D F V Y - C L I F W R F L Maximal non-overlapping open reading frames (>= 64 codons): none AGS-2 (121600 120642,120344 120321) SCR (e 0.848 d 0.000 a 0.000,e 0.750) Exon 1 121600 120642 ( 959 n); score: 0.848 Intron 1 120641 120345 ( 297 n); Pd: 0.000 Pa: 0.000 Exon 2 120344 120321 ( 24 n); score: 0.750 PGS (121071 120642,120344 120321) SGN-E550629+ PGS (121071 120642,120344 120321) SGN-E550645+ PGS (121600 120914) SGN-E241731+ 3-phase translation of AGS-2 (-strand): . . . . . . 121600 AGACTTACCTTCAACTTGTTATTACTATTGTTCGGTTGATGATTTCCTTAGAAAGTAAAA R L T F N L L L L L F G - - F P - K V K D L P S T C Y Y Y C S V D D F L R K - K T Y L Q L V I T I V R L M I S L E S K . . . . . . 121540 ACATAAAAAGGGGGTTTTGTATTTCCTAATGAGTAAAAATAACTAACGGACTTGAAAGAG T - K G G F V F P N E - K - L T D L K E H K K G V L Y F L M S K N N - R T - K R N I K R G F C I S - - V K I T N G L E R . . . . . . 121480 ACACTTAACAACTTTTAATGTTGGGTTTTAATCAATTAATCAAAGTAACTAGGGTTTACG T L N N F - C W V L I N - S K - L G F T H L T T F N V G F - S I N Q S N - G L R D T - Q L L M L G F N Q L I K V T R V Y . . . . . . 121420 TGTTCCCCACAGGTTCATAACTTGATAATTCTAACTATAACAATTCTTTCCTAGTATCTT C S P Q V H N L I I L T I T I L S - Y L V P H R F I T - - F - L - Q F F P S I L V F P T G S - L D N S N Y N N S F L V S . . . . . . 121360 GCATGCAAAGTGATAAATTATGTATTTCTAAATCCTTGGTCCGGCATCTAGAAAATCTCA A C K V I N Y V F L N P W S G I - K I S H A K - - I M Y F - I L G P A S R K S H C M Q S D K L C I S K S L V R H L E N L . . . . . . 121300 CTCCGCACCTTGGTCTGGCTGCGTGTGTTGCTTTCCTAACCCTTATCTTTACCTCATATT L R T L V W L R V L L S - P L S L P H I S A P W S G C V C C F P N P Y L Y L I L T P H L G L A A C V A F L T L I F T S Y . . . . . . 121240 AAGCATCGTATTCGATATTTGACTAAGTTATTACCTCGTACCAATCAATACTAGCCTATT K H R I R Y L T K L L P R T N Q Y - P I S I V F D I - L S Y Y L V P I N T S L L - A S Y S I F D - V I T S Y Q S I L A Y . . . . . . 121180 AGATAGCATACACTAAATCTATGTTAATACTTCTTTTCCTATTATCTACCTCCTTGGTCC R - H T L N L C - Y F F S Y Y L P P W S D S I H - I Y V N T S F P I I Y L L G P - I A Y T K S M L I L L F L L S T S L V . . . . . . 121120 GACAAGTAGCATTAAGGCGAGTTCTAACGTTGATCATCCGTTAAAAAGACTTCTAAGCGA D K - H - G E F - R - S S V K K T S K R T S S I K A S S N V D H P L K R L L S E R Q V A L R R V L T L I I R - K D F - A . . . . . . 121060 AAGAATTATTAATACATACAAGACACTATTCTAGAATTGTTCTTTTAGCTAGGGTTTATC K N Y - Y I Q D T I L E L F F - L G F I R I I N T Y K T L F - N C S F S - G L S K E L L I H T R H Y S R I V L L A R V Y . . . . . . 121000 TCATTATTTGCCTATGGTTCCCACAACCCTAGTTATGGATTTTAGTTCCTCATAGCCATA S L F A Y G S H N P S Y G F - F L I A I H Y L P M V P T T L V M D F S S S - P - L I I C L W F P Q P - L W I L V P H S H . . . . . . 120940 AACACAATATTCAAATATATTAAATAAGAATTCATCTACTTAATTCAATGAGAAAGAGTA N T I F K Y I K - E F I Y L I Q - E R V T Q Y S N I L N K N S S T - F N E K E - K H N I Q I Y - I R I H L L N S M R K S . . . . . . 120880 AAGTCCGAAAAATTGCTTGATTAATTACCAAAAATCACTTGTAAGAATCTCCAAAAAATC K S E K L L D - L P K I T C K N L Q K I S P K N C L I N Y Q K S L V R I S K K S K V R K I A - L I T K N H L - E S P K N . . . . . . 120820 AAACACTAATAAACAAAGTCTAATAATATGATGTCTAATCTCCCAGAGTCTAACCTCAAA K H - - T K S N N M M S N L P E S N L K N T N K Q S L I I - C L I S Q S L T S K Q T L I N K V - - Y D V - S P R V - P Q . . . . . . 120760 AATGAGGTTTTTCGAACTATTTATAAAAAAATAAAAACCTAATTAAAGAAGGATTCTAAA N E V F R T I Y K K I K T - L K K D S K M R F F E L F I K K - K P N - R R I L N K - G F S N Y L - K N K N L I K E G F - . . . . . . : 120700 TTACTGGAAATCTGCCAAAACGCGGCTGGGTCGACGGACCACGCGACGGACCGTCGTGG : G L L E I C Q N A A G S T D H A T D R R G : Y W K S A K T R L G R R T T R R T V V : G I T G N L P K R G W V D G P R D G P S W : . . . 120343 CACGACGGACCATCATAAGCTCC H D G P S - A T T D H H K L A R R T I I S S Maximal non-overlapping open reading frames (>= 64 codons): none PGL 11 (+ strand): 122122 122711 AGS-1 (122122 122711) SCR (e 0.903) Exon 1 122122 122711 ( 590 n); score: 0.903 PGS (122122 122711) SGN-E351864- 3-phase translation of AGS-1 (+strand): . . . . . . 122122 TTTGTGGTAACTAGTAGCCTGATGCAAATGCTCACTGCCAGAGGTTTGTTTTCAGGGCTA F V V T S S L M Q M L T A R G L F S G L L W - L V A - C K C S L P E V C F Q G Y C G N - - P D A N A H C Q R F V F R A . . . . . . 122182 CCTTCTGAGGATCCACATGCCCATATAGCTAAGGTTAGGGCAGTGTGTAAAAGTTGTGTG P S E D P H A H I A K V R A V C K S C V L L R I H M P I - L R L G Q C V K V V W T F - G S T C P Y S - G - G S V - K L C . . . . . . 122242 GGGAGGCCTGATTTGGATCTAGATGTAATAGGTCTCAGAGTGTTTCCTCTCTCACTGACG G R P D L D L D V I G L R V F P L S L T G G L I W I - M - - V S E C F L S H - R G E A - F G S R C N R S Q S V S S L T D . . . . . . 122302 GGAGAGGCTTCTATGTGGTTTACTGAGCTCCCATACAACTCCATCTTCACTTGGAACCAA G E A S M W F T E L P Y N S I F T W N Q E R L L C G L L S S H T T P S S L G T N G R G F Y V V Y - A P I Q L H L H L E P . . . . . . 122362 CTACGGGATGTCTTCTTAGCACGCTACTATCCGGTCTCCAAGAAATTAAACCACAAAGAC L R D V F L A R Y Y P V S K K L N H K D Y G M S S - H A T I R S P R N - T T K T T T G C L L S T L L S G L Q E I K P Q R . . . . . . 122422 AGGGTGAATAACTTTGTGGCACTACCAGGAGAGTCAGTTAGTAGTTCTTGGGATAGATTC R V N N F V A L P G E S V S S S W D R F G - I T L W H Y Q E S Q L V V L G I D S Q G E - L C G T T R R V S - - F L G - I . . . . . . 122482 ACGTCATTCTTGAGAAGTGTTCCAAATCACCGTATTGATGATGAGTCACTGAAGGAATAC T S F L R S V P N H R I D D E S L K E Y R H S - E V F Q I T V L M M S H - R N T H V I L E K C S K S P Y - - - V T E G I . . . . . . 122542 TTCTATCGGGGACAGGATAATAACAATAAAGCAGTGTTGGACACTATAGCAGGTGGATCT F Y R G Q D N N N K A V L D T I A G G S S I G D R I I T I K Q C W T L - Q V D L L L S G T G - - Q - S S V G H Y S R W I . . . . . . 122602 TATGGAGAATGCCCTTATGCTGAGATTGCTGAGAAATTAGAGAAAATCTCCCGTAACAAC Y G E C P Y A E I A E K L E K I S R N N M E N A L M L R L L R N - R K S P V T T L W R M P L C - D C - E I R E N L P - Q . . . . . 122662 AAAGCTTGGAGTACTAGGAAGTCCGATACAGGGAGAAACACCTTCGCAGT K A W S T R K S D T G R N T F A K L G V L G S P I Q G E T P S Q Q S L E Y - E V R Y R E K H L R S Maximal non-overlapping open reading frames (>= 64 codons): >C10HBa0115K16.1+_PGL-11_AGS-1_PPS_1 (122122 122709) (frame '1'; 588 bp, 196 residues) 1 FVVTSSLMQM LTARGLFSGL PSEDPHAHIA KVRAVCKSCV GRPDLDLDVI GLRVFPLSLT 61 GEASMWFTEL PYNSIFTWNQ LRDVFLARYY PVSKKLNHKD RVNNFVALPG ESVSSSWDRF 121 TSFLRSVPNH RIDDESLKEY FYRGQDNNNK AVLDTIAGGS YGECPYAEIA EKLEKISRNN 181 KAWSTRKSDT GRNTFA 3-phase translation of AGS-1 (-strand): . . . . . . 122711 ACTGCGAAGGTGTTTCTCCCTGTATCGGACTTCCTAGTACTCCAAGCTTTGTTGTTACGG T A K V F L P V S D F L V L Q A L L L R L R R C F S L Y R T S - Y S K L C C Y G C E G V S P C I G L P S T P S F V V T . . . . . . 122651 GAGATTTTCTCTAATTTCTCAGCAATCTCAGCATAAGGGCATTCTCCATAAGATCCACCT E I F S N F S A I S A - G H S P - D P P R F S L I S Q Q S Q H K G I L H K I H L G D F L - F L S N L S I R A F S I R S T . . . . . . 122591 GCTATAGTGTCCAACACTGCTTTATTGTTATTATCCTGTCCCCGATAGAAGTATTCCTTC A I V S N T A L L L L S C P R - K Y S F L - C P T L L Y C Y Y P V P D R S I P S C Y S V Q H C F I V I I L S P I E V F L . . . . . . 122531 AGTGACTCATCATCAATACGGTGATTTGGAACACTTCTCAAGAATGACGTGAATCTATCC S D S S S I R - F G T L L K N D V N L S V T H H Q Y G D L E H F S R M T - I Y P Q - L I I N T V I W N T S Q E - R E S I . . . . . . 122471 CAAGAACTACTAACTGACTCTCCTGGTAGTGCCACAAAGTTATTCACCCTGTCTTTGTGG Q E L L T D S P G S A T K L F T L S L W K N Y - L T L L V V P Q S Y S P C L C G P R T T N - L S W - C H K V I H P V F V . . . . . . 122411 TTTAATTTCTTGGAGACCGGATAGTAGCGTGCTAAGAAGACATCCCGTAGTTGGTTCCAA F N F L E T G - - R A K K T S R S W F Q L I S W R P D S S V L R R H P V V G S K V - F L G D R I V A C - E D I P - L V P . . . . . . 122351 GTGAAGATGGAGTTGTATGGGAGCTCAGTAAACCACATAGAAGCCTCTCCCGTCAGTGAG V K M E L Y G S S V N H I E A S P V S E - R W S C M G A Q - T T - K P L P S V R S E D G V V W E L S K P H R S L S R Q - . . . . . . 122291 AGAGGAAACACTCTGAGACCTATTACATCTAGATCCAAATCAGGCCTCCCCACACAACTT R G N T L R P I T S R S K S G L P T Q L E E T L - D L L H L D P N Q A S P H N F E R K H S E T Y Y I - I Q I R P P H T T . . . . . . 122231 TTACACACTGCCCTAACCTTAGCTATATGGGCATGTGGATCCTCAGAAGGTAGCCCTGAA L H T A L T L A I W A C G S S E G S P E Y T L P - P - L Y G H V D P Q K V A L K F T H C P N L S Y M G M W I L R R - P - . . . . . 122171 AACAAACCTCTGGCAGTGAGCATTTGCATCAGGCTACTAGTTACCACAAA N K P L A V S I C I R L L V T T T N L W Q - A F A S G Y - L P Q K Q T S G S E H L H Q A T S Y H K Maximal non-overlapping open reading frames (>= 64 codons): >C10HBa0115K16.1-_PGL-11_AGS-1_PPS_1 (122384 122124) (frame '1'; 261 bp, 87 residues) 1 RAKKTSRSWF QVKMELYGSS VNHIEASPVS ERGNTLRPIT SRSKSGLPTQ LLHTALTLAI 61 WACGSSEGSP ENKPLAVSIC IRLLVTT PGL 12 (- strand): 128468 125033 AGS-1 (126405 125984,125953 125033) SCR (e 0.852 d 0.000 a 0.000,e 0.949) Exon 1 126405 125984 ( 422 n); score: 0.852 Intron 1 125983 125954 ( 30 n); Pd: 0.000 Pa: 0.000 Exon 2 125953 125033 ( 921 n); score: 0.949 PGS (125764 125033) SGN-E577717+ PGS (125867 125140) SGN-E356787+ PGS (126405 125984,125953 125689) SGN-E395434- PGS (126197 125984,125953 125690) SGN-E205922- 3-phase translation of AGS-1 (-strand): . . . . . . 126405 ATCAAATAACTCAATCACAAGAATGGGGTTTAGAGGGAGCTCTTGCTTTCTTGAAATACC I K - L N H K N G V - R E L L L S - N T S N N S I T R M G F R G S S C F L E I P Q I T Q S Q E W G L E G A L A F L K Y . . . . . . 126345 ACCATATCGTTGACATTTGTCACATGATTTAGCAAACCCATGAGTATCTTGATGAAGAGT T I S L T F V T - F S K P M S I L M K S P Y R - H L S H D L A N P - V S - - R V H H I V D I C H M I - Q T H E Y L D E E . . . . . . 126285 TGGCCAATAGTAACCACATTGCAATATCTTGTGAGCGGTTCGGATACCACTGTGATGTCC W P I V T T L Q Y L V S G S D T T V M S G Q - - P H C N I L - A V R I P L - C P L A N S N H I A I S C E R F G Y H C D V . . . . . . 126225 GCCAACAGGTGAAAAATGGCTTTTCTCCAACACACTCAACATTTCACATTCTGGCACACA A N R - K M A F L Q H T Q H F T F W H T P T G E K W L F S N T L N I S H S G T Q R Q Q V K N G F S P T H S T F H I L A H . . . . . . 126165 ACGCCGAATAAGCGCGTCGGCACAACTCCTATACAAGTATGGTTCATCCCAAAAGAACTT T P N K R V G T T P I Q V W F I P K E L R R I S A S A Q L L Y K Y G S S Q K N F N A E - A R R H N S Y T S M V H P K R T . . . . . . 126105 CACATCGTACATGAACTTTTTCCTTTGATGAAAGGACAAGTCTGATGGAACAATATCACT H I V H E L F P L M K G Q V - W N N I T T S Y M N F F L - - K D K S D G T I S L S H R T - T F S F D E R T S L M E Q Y H . . . . . . 126045 AGCCAGATAGTTCGCAAAATTTGCGAACCATGGAATCAAGTCTTGTGAAGCAGCCAATAC S Q I V R K I C E P W N Q V L - S S Q Y A R - F A K F A N H G I K S C E A A N T - P D S S Q N L R T M E S S L V K Q P I . : . . . . . 125985 AT : TATTATCCCCTAACTCTCTCATAGCTTCATCCTCTAGACGAGACAAATGATCAGCAAC I : I I P - L S H S F I L - T R Q M I S N : L L S P N S L I A S S S R R D K - S A T H : Y Y P L T L S - L H P L D E T N D Q Q . . . . . . 125895 TTGATTTTCAGTCCCTTTTCTATGCAGCACTTCAAAGTCAAATTCTTGCTGCAGTAATAC L I F S P F S M Q H F K V K F L L Q - Y - F S V P F L C S T S K S N S C C S N T L D F Q S L F Y A A L Q S Q I L A A V I . . . . . . 125835 CCAACGAATAAGCCTTGGTTTCGCATCCTTTTTCGCCATCAAATATCTCAATACTGAATG P T N K P W F R I L F R H Q I S Q Y - M Q R I S L G F A S F F A I K Y L N T E W P N E - A L V S H P F S P S N I S I L N . . . . . . 125775 GTCAGTATGCACTATAACTCTAGTACCTAGCAAATAGAAGTGAAATTTCTCAAAAGCAAA V S M H Y N S S T - Q I E V K F L K S K S V C T I T L V P S K - K - N F S K A K G Q Y A L - L - Y L A N R S E I S Q K Q . . . . . . 125715 GACTACTGCGAGGAGTTCTTGCTCAGTCACTGTGTAGTTCTTCTGGGCTTCATTTAGGGC D Y C E E F L L S H C V V L L G F I - G T T A R S S C S V T V - F F W A S F R A R L L R G V L A Q S L C S S S G L H L G . . . . . . 125655 TTTACTAGCATAGTAAATTGGGTGAAGGATTTTGTTTCTTCTCTGTCCCAATACTACACC F T S I V N W V K D F V S S L S Q Y Y T L L A - - I G - R I L F L L C P N T T P L Y - H S K L G E G F C F F S V P I L H . . . . . . 125595 AAGAGCCACCCCACTGGCATCACACATTACCTCAAATGGACTGTTCCAATCCGGAGAAAT K S H P T G I T H Y L K W T V P I R R N R A T P L A S H I T S N G L F Q S G E I Q E P P H W H H T L P Q M D C S N P E K . . . . . . 125535 AATGATAGGTACAGACCCTAACTTCTCTTTTAGCTCACCGAACACTTTAAGACAGGATTC N D R Y R P - L L F - L T E H F K T G F M I G T D P N F S F S S P N T L R Q D S - - - V Q T L T S L L A H R T L - D R I . . . . . . 125475 ATCAAAACAAAATTTACATTCTTTCTCCAGCAATTTGCACAATGAGTGTGCAATCTTTGA I K T K F T F F L Q Q F A Q - V C N L - S K Q N L H S F S S N L H N E C A I F E H Q N K I Y I L S P A I C T M S V Q S L . . . . . . 125415 AATGTCTTTGATGAATCTCCGATAAAAACCTGCATGCCCAAGAAAGCTTCTCACACCTTT N V F D E S P I K T C M P K K A S H T F M S L M N L R - K P A C P R K L L T P F K C L - - I S D K N L H A Q E S F S H L . . . . . . 125355 TACAGAGATCGGCGGGGGAAGTCTCTCTATTACCTCAACTTTAGCTCGATCAACCTCTAT Y R D R R G K S L Y Y L N F S S I N L Y T E I G G G S L S I T S T L A R S T S M L Q R S A G E V S L L P Q L - L D Q P L . . . . . . 125295 GCCCTTTTCTGAAATGCGATGACCTAACACAGTACCCTCTTTCACCATGAAATGACACTT A L F - N A M T - H S T L F H H E M T L P F S E M R - P N T V P S F T M K - H F C P F L K C D D L T Q Y P L S P - N D T . . . . . . 125235 TTCCCAGTTTAGTACCAAATTGCAGTCTTCACATCTCTTAAGAACCTCAGATAAATTGGT F P V - Y Q I A V F T S L K N L R - I G S Q F S T K L Q S S H L L R T S D K L V F P S L V P N C S L H I S - E P Q I N W . . . . . . 125175 CAAGCACTGCTCGAATGAATCACCAACCACAGAAAAATCATCCATAAAAACCTCTATAGT Q A L L E - I T N H R K I I H K N L Y S K H C S N E S P T T E K S S I K T S I V S S T A R M N H Q P Q K N H P - K P L - . . . . . . 125115 ATCCTCCACCATGTCAGAAAATATTGACATCATACATCTCTGAAAGGTTGCGGGTGCATT I L H H V R K Y - H H T S L K G C G C I S S T M S E N I D I I H L - K V A G A L Y P P P C Q K I L T S Y I S E R L R V H . . . 125055 GCACAACCCAAATGACATTCTTC A Q P K - H S H N P N D I L C T T Q M T F F Maximal non-overlapping open reading frames (>= 64 codons): >C10HBa0115K16.1-_PGL-12_AGS-1_PPS_1 (125630 125391) (frame '2'; 237 bp, 79 residues) 1 RILFLLCPNT TPRATPLASH ITSNGLFQSG EIMIGTDPNF SFSSPNTLRQ DSSKQNLHSF 61 SSNLHNECAI FEMSLMNLR- AGS-2 (128468 128400,127845 127799,127071 126739,126620 126596) SCR (e 0.862 d 0.900 a 0.868,e 0.979 d 0.991 a 0.000,e 0.906 d 0.404 a 0.922,e 0.560) Exon 1 128468 128400 ( 69 n); score: 0.862 Intron 1 128399 127846 ( 554 n); Pd: 0.900 Pa: 0.868 Exon 2 127845 127799 ( 47 n); score: 0.979 Intron 2 127798 127072 ( 727 n); Pd: 0.991 Pa: 0.000 Exon 3 127071 126739 ( 333 n); score: 0.906 Intron 3 126738 126621 ( 118 n); Pd: 0.404 Pa: 0.922 Exon 4 126620 126596 ( 25 n); score: 0.560 PGS (128468 128400,127845 127799,127071 126739,126620 126596) SGN-E543103- PGS (128468 128400,127845 127799,127071 126739,126620 126596) SGN-E543104+ PGS (127072 126739,126620 126596) SGN-E225616- PGS (127072 126739,126620 126596) SGN-E306317+ PGS (127072 126739,126620 126596) SGN-E303695+ PGS (127072 126739) SGN-E303256+ 3-phase translation of AGS-2 (-strand): . . . . . . 128468 GGCAGCCATGGAAATGGAGAAACCAACCCTGCAACTCTTGGCCAGCAGCTGCAAATAATT G S H G N G E T N P A T L G Q Q L Q I I A A M E M E K P T L Q L L A S S C K - F Q P W K W R N Q P C N S W P A A A N N . : . . . . . : 128408 TGGTTAGTA : ATTAATAGCTTGAGCAGTAAATATTGGACGTGCGGCTCGATTATACG : GTGT W L V : I N S L S S K Y W T C G S I I R : C G - - : L I A - A V N I G R A A R L Y : G V L V S : N - - L E Q - I L D V R L D Y T : V . . . . . . 127067 AGACGCGCAGTTCGGTGATCCTCCCGCCTAGGATATCTACTCTGCTGATTGGGAGAGCTC R R A V R - S S R L G Y L L C - L G E L D A Q F G D P P A - D I Y S A D W E S S - T R S S V I L P P R I S T L L I G R A . . . . . . 127007 CACTGTTCCGGAGCCCATTCGTTTTGGTACATAACTTTTGTGTAGTCTTTTGCTCGTCTA H C S G A H S F W Y I T F V - S F A R L T V P E P I R F G T - L L C S L L L V Y P L F R S P F V L V H N F C V V F C S S . . . . . . 126947 TGGGTATGGCGGGGCCCTGTCCCGTCGAGTTTCACTAATGTACCCTTAGAGGTCTGTGGA W V W R G P V P S S F T N V P L E V C G G Y G G A L S R R V S L M Y P - R S V D M G M A G P C P V E F H - C T L R G L W . . . . . . 126887 CATTATGTGGGTTGTATATATATGTTTTGGATAATGGTCTGGACATGGTTTGTTTGGGAT H Y V G C I Y M F W I M V W T W F V W D I M W V V Y I C F G - W S G H G L F G M T L C G L Y I Y V L D N G L D M V C L G . . . . . . 126827 GTCCGCTTGTACAGGGGCAGCCTTGTCGGCTGTGTACATCATTATGCTTTGAATAGTGGC V R L Y R G S L V G C V H H Y A L N S G S A C T G A A L S A V Y I I M L - I V A C P L V Q G Q P C R L C T S L C F E - W . . . : . . . 126767 GGCCTTGTCGGCTCGCGTATGCTGTTATG : GTTTGTATGTCGGTGTCCAAAACGG G L V G S R M L L W : F V C R C P K R A L S A R V C C Y : G L Y V G V Q N R P C R L A Y A V M : V C M S V S K T Maximal non-overlapping open reading frames (>= 64 codons): >C10HBa0115K16.1-_PGL-12_AGS-2_PPS_1 (126962 126739,126620 126596) (frame '1'; 249 bp, 83 residues) 1 SFARLWVWRG PVPSSFTNVP LEVCGHYVGC IYMFWIMVWT WFVWDVRLYR GSLVGCVHHY 61 ALNSGGLVGS RMLLWFVCRC PKR AGS-3 (128466 128407,127845 127799,127071 126739,126620 126596) SCR (e 0.842 d 0.997 a 0.868,e 0.894 d 0.991 a 0.000,e 0.905 d 0.404 a 0.922,e 0.560) Exon 1 128466 128407 ( 60 n); score: 0.842 Intron 1 128406 127846 ( 561 n); Pd: 0.997 Pa: 0.868 Exon 2 127845 127799 ( 47 n); score: 0.894 Intron 2 127798 127072 ( 727 n); Pd: 0.991 Pa: 0.000 Exon 3 127071 126739 ( 333 n); score: 0.905 Intron 3 126738 126621 ( 118 n); Pd: 0.404 Pa: 0.922 Exon 4 126620 126596 ( 25 n); score: 0.560 PGS (128466 128407,127845 127799,127071 126739,126620 126596) SGN-E374134- PGS (128465 128407,127845 127799,127071 126739,126620 126596) SGN-E305738+ PGS (128465 128407,127845 127799,127071 126739,126620 126596) SGN-E374135+ PGS (128465 128407,127845 127799,127071 126739) SGN-E310669+ 3-phase translation of AGS-3 (-strand): . . . . . . : 128466 CAGCCATGGAAATGGAGAAACCAACCCTGCAACTCTTGGCCAGCAGCTGCAAATAATTTG : Q P W K W R N Q P C N S W P A A A N N L : S H G N G E T N P A T L G Q Q L Q I I - : A M E M E K P T L Q L L A S S C K - F : . . . . . : . 127845 ATTAATAGCTTGAGCAGTAAATATTGGACGTGCGGCTCGATTATACG : GTGTAGACGCGCA I N S L S S K Y W T C G S I I R : C R R A L I A - A V N I G R A A R L Y : G V D A Q D - - L E Q - I L D V R L D Y T : V - T R . . . . . . 127058 GTTCGGTGATCCTCCCGCCTAGGATATCTACTCTGCTGATTGGGAGAGCTCCACTGTTCC V R - S S R L G Y L L C - L G E L H C S F G D P P A - D I Y S A D W E S S T V P S S V I L P P R I S T L L I G R A P L F . . . . . . 126998 GGAGCCCATTCGTTTTGGTACATAACTTTTGTGTAGTCTTTTGCTCGTCTATGGGTATGG G A H S F W Y I T F V - S F A R L W V W E P I R F G T - L L C S L L L V Y G Y G R S P F V L V H N F C V V F C S S M G M . . . . . . 126938 CGGGGCCCTGTCCCGTCGAGTTTCACTAATGTACCCTTAGAGGTCTGTGGACATTATGTG R G P V P S S F T N V P L E V C G H Y V G A L S R R V S L M Y P - R S V D I M W A G P C P V E F H - C T L R G L W T L C . . . . . . 126878 GGTTGTATATATATGTTTTGGATAATGGTCTGGACATGGTTTGTTTGGGATGTCCGCTTG G C I Y M F W I M V W T W F V W D V R L V V Y I C F G - W S G H G L F G M S A C G L Y I Y V L D N G L D M V C L G C P L . . . . . . 126818 TACAGGGGCAGCCTTGTCGGCTGTGTACATCATTATGCTTTGAATAGTGGCGGCCTTGTC Y R G S L V G C V H H Y A L N S G G L V T G A A L S A V Y I I M L - I V A A L S V Q G Q P C R L C T S L C F E - W R P C . . : . . . 126758 GGCTCGCGTATGCTGTTATG : GTTTGTATGTCGGTGTCCAAAACGG G S R M L L W : F V C R C P K R A R V C C Y : G L Y V G V Q N R L A Y A V M : V C M S V S K T Maximal non-overlapping open reading frames (>= 64 codons): >C10HBa0115K16.1-_PGL-12_AGS-3_PPS_1 (126962 126739,126620 126596) (frame '1'; 249 bp, 83 residues) 1 SFARLWVWRG PVPSSFTNVP LEVCGHYVGC IYMFWIMVWT WFVWDVRLYR GSLVGCVHHY 61 ALNSGGLVGS RMLLWFVCRC PKR AGS-4 (128449 128407,127445 127257,127076 126739) SCR (e 0.837 d 0.997 a 0.963,e 0.942 d 0.000 a 0.000,e 0.898) Exon 1 128449 128407 ( 43 n); score: 0.837 Intron 1 128406 127446 ( 961 n); Pd: 0.997 Pa: 0.963 Exon 2 127445 127257 ( 189 n); score: 0.942 Intron 2 127256 127077 ( 180 n); Pd: 0.000 Pa: 0.000 Exon 3 127076 126739 ( 338 n); score: 0.898 PGS (128449 128407,127445 127257,127076 126739) SGN-E538151+ PGS (128449 128407,127445 127257,127076 126739) SGN-E538156+ PGS (128449 128407,127445 127257,127076 126841) SGN-E268096+ 3-phase translation of AGS-4 (-strand): . . . . . : . 128449 AAACCAACCCTGCAACTCTTGGCCAGCAGCTGCAAATAATTTG : AGTCATTTATCATTTCA K P T L Q L L A S S C K - F : E S F I I S N Q P C N S W P A A A N N L : S H L S F H T N P A T L G Q Q L Q I I - : V I Y H F . . . . . . 127428 CCGAGTCCCGGGCCGGGTAATGTTCGTGCGGAGTTTCTTGCATATGTCACCGAGTTCCTC P S P G P G N V R A E F L A Y V T E F L R V P G R V M F V R S F L H M S P S S S T E S R A G - C S C G V S C I C H R V P . . . . . . 127368 ACTAGAGGGCCGGGTATGTATATTATATATATGATTGGTGATGAGGATGGTTATGATGAT T R G P G M Y I I Y M I G D E D G Y D D L E G R V C I L Y I - L V M R M V M M M H - R A G Y V Y Y I Y D W - - G W L - - . . . . . . : 127308 GATGATGACGGAGATGACGTGATGATTATTTTGCCGAGCCCCTTACTAGGGA : GCAGGGTG D D D G D D V M I I L P S P L L G : S R V M M T E M T - - L F C R A P Y - G : A G C - - - R R - R D D Y F A E P L T R E : Q G . . . . . . 127068 TAGACGCGCAGTTCGGTGATCCTCCCGCCTAGGATATCTACTCTGCTGATTGGGAGAGCT - T R S S V I L P P R I S T L L I G R A R R A V R - S S R L G Y L L C - L G E L V D A Q F G D P P A - D I Y S A D W E S . . . . . . 127008 CCACTGTTCCGGAGCCCATTCGTTTTGGTACATAACTTTTGTGTAGTCTTTTGCTCGTCT P L F R S P F V L V H N F C V V F C S S H C S G A H S F W Y I T F V - S F A R L S T V P E P I R F G T - L L C S L L L V . . . . . . 126948 ATGGGTATGGCGGGGCCCTGTCCCGTCGAGTTTCACTAATGTACCCTTAGAGGTCTGTGG M G M A G P C P V E F H - C T L R G L W W V W R G P V P S S F T N V P L E V C G Y G Y G G A L S R R V S L M Y P - R S V . . . . . . 126888 ACATTATGTGGGTTGTATATATATGTTTTGGATAATGGTCTGGACATGGTTTGTTTGGGA T L C G L Y I Y V L D N G L D M V C L G H Y V G C I Y M F W I M V W T W F V W D D I M W V V Y I C F G - W S G H G L F G . . . . . . 126828 TGTCCGCTTGTACAGGGGCAGCCTTGTCGGCTGTGTACATCATTATGCTTTGAATAGTGG C P L V Q G Q P C R L C T S L C F E - W V R L Y R G S L V G C V H H Y A L N S G M S A C T G A A L S A V Y I I M L - I V . . . 126768 CGGCCTTGTCGGCTCGCGTATGCTGTTATG R P C R L A Y A V M G L V G S R M L L A A L S A R V C C Y Maximal non-overlapping open reading frames (>= 64 codons): >C10HBa0115K16.1-_PGL-12_AGS-4_PPS_1 (126962 126741) (frame '2'; 222 bp, 74 residues) 1 SFARLWVWRG PVPSSFTNVP LEVCGHYVGC IYMFWIMVWT WFVWDVRLYR GSLVGCVHHY 61 ALNSGGLVGS RMLL >C10HBa0115K16.1-_PGL-12_AGS-4_PPS_2 (128410 128407,127445 127257,127076 127066) (frame '1'; 201 bp, 67 residues) 1 FESFIISPSP GPGNVRAEFL AYVTEFLTRG PGMYIIYMIG DEDGYDDDDD GDDVMIILPS 61 PLLGSRV- AGS-5 (127390 127336,127290 126739) SCR (e 0.818 d 0.000 a 0.000,e 0.899) Exon 1 127390 127336 ( 55 n); score: 0.818 Intron 1 127335 127291 ( 45 n); Pd: 0.000 Pa: 0.000 Exon 2 127290 126739 ( 552 n); score: 0.899 PGS (127390 127336,127290 126739) SGN-E544254- 3-phase translation of AGS-5 (-strand): . . . . . . : 127390 TGCATATGTCACCGAGTTCCTCACTAGAGGGCCGGGTATGTATATTATATATATG : GTGAT C I C H R V P H - R A G Y V Y Y I Y : G D A Y V T E F L T R G P G M Y I I Y M : V M H M S P S S S L E G R V C I L Y I W : - . . . . . . 127285 GATTATTTTGCCGAGCCCCTTACTAGGGAAGCTGGGCACCTTAAATGTTAAATATATGCA D Y F A E P L T R E A G H L K C - I Y A I I L P S P L L G K L G T L N V K Y M H - L F C R A P Y - G S W A P - M L N I C . . . . . . 127225 TGATTTTCACTTAAAAAGTATATGTGTAGCGATATTTGTTTCGAGTTGCCACATTGGTAT - F S L K K Y M C S D I C F E L P H W Y D F H L K S I C V A I F V S S C H I G I M I F T - K V Y V - R Y L F R V A T L V . . . . . . 127165 CCTGTCATCTTTACCTTATGCTTTACATACTCAGTACATTGGTCCGTACTGGACCCCCCC P V I F T L C F T Y S V H W S V L D P P L S S L P Y A L H T Q Y I G P Y W T P P S C H L Y L M L Y I L S T L V R T G P P . . . . . . 127105 TTTCCTCGGGGGGGCTGCGTTTCATGCCCGCAGGGTGTAGACGCGCAGTTCGGTGATCCT F P R G G C V S C P Q G V D A Q F G D P F L G G A A F H A R R V - T R S S V I L L S S G G L R F M P A G C R R A V R - S . . . . . . 127045 CCCGCCTAGGATATCTACTCTGCTGATTGGGAGAGCTCCACTGTTCCGGAGCCCATTCGT P A - D I Y S A D W E S S T V P E P I R P P R I S T L L I G R A P L F R S P F V S R L G Y L L C - L G E L H C S G A H S . . . . . . 126985 TTTGGTACATAACTTTTGTGTAGTCTTTTGCTCGTCTATGGGTATGGCGGGGCCCTGTCC F G T - L L C S L L L V Y G Y G G A L S L V H N F C V V F C S S M G M A G P C P F W Y I T F V - S F A R L W V W R G P V . . . . . . 126925 CGTCGAGTTTCACTAATGTACCCTTAGAGGTCTGTGGACATTATGTGGGTTGTATATATA R R V S L M Y P - R S V D I M W V V Y I V E F H - C T L R G L W T L C G L Y I Y P S S F T N V P L E V C G H Y V G C I Y . . . . . . 126865 TGTTTTGGATAATGGTCTGGACATGGTTTGTTTGGGATGTCCGCTTGTACAGGGGCAGCC C F G - W S G H G L F G M S A C T G A A V L D N G L D M V C L G C P L V Q G Q P M F W I M V W T W F V W D V R L Y R G S . . . . . . 126805 TTGTCGGCTGTGTACATCATTATGCTTTGAATAGTGGCGGCCTTGTCGGCTCGCGTATGC L S A V Y I I M L - I V A A L S A R V C C R L C T S L C F E - W R P C R L A Y A L V G C V H H Y A L N S G G L V G S R M . 126745 TGTTATG C Y V M L L Maximal non-overlapping open reading frames (>= 64 codons): >C10HBa0115K16.1-_PGL-12_AGS-5_PPS_1 (127389 127336,127290 127066) (frame '2'; 276 bp, 92 residues) 1 AYVTEFLTRG PGMYIIYMVM IILPSPLLGK LGTLNVKYMH DFHLKSICVA IFVSSCHIGI 61 LSSLPYALHT QYIGPYWTPP FLGGAAFHAR RV- >C10HBa0115K16.1-_PGL-12_AGS-5_PPS_2 (126962 126741) (frame '0'; 222 bp, 74 residues) 1 SFARLWVWRG PVPSSFTNVP LEVCGHYVGC IYMFWIMVWT WFVWDVRLYR GSLVGCVHHY 61 ALNSGGLVGS RMLL AGS-6 (128457 127757) SCR (e 0.859) Exon 1 128457 127757 ( 701 n); score: 0.859 PGS (128449 127757) SGN-E328093+ PGS (128457 128003) SGN-E298250+ 3-phase translation of AGS-6 (-strand): . . . . . . 128457 AAATGGAGAAACCAACCCTGCAACTCTTGGCCAGCAGCTGCAAATAATTTGGTTAGTAAT K W R N Q P C N S W P A A A N N L V S N N G E T N P A T L G Q Q L Q I I W L V I M E K P T L Q L L A S S C K - F G - - . . . . . . 128397 CTCCTTGTTTGGTGTGTTAATTCTTTAGAATACCCTTGTTAATTATCCATTAATTTTAAG L L V W C V N S L E Y P C - L S I N F K S L F G V L I L - N T L V N Y P L I L R S P C L V C - F F R I P L L I I H - F - . . . . . . 128337 AAGGGGGCGTGACCAGTAGCTTAGGAAGTTTGTTTTAGTTATTGAATGTACTAAGTATGA K G A - P V A - E V C F S Y - M Y - V - R G R D Q - L R K F V L V I E C T K Y E E G G V T S S L G S L F - L L N V L S M . . . . . . 128277 ATGGAAACCATAATCGGATTATTAGTGGTGTCGTGTTGGTGCTTGGGCTGTTTTGATTAA M E T I I G L L V V S C W C L G C F D - W K P - S D Y - W C R V G A W A V L I K N G N H N R I I S G V V L V L G L F - L . . . . . . 128217 AGCAAACTGCAGGAAAATTCTGTTTTGGCATTATGTATATGTTGAATGTGATTATGAGTA S K L Q E N S V L A L C I C - M - L - V A N C R K I L F W H Y V Y V E C D Y E Y K Q T A G K F C F G I M Y M L N V I M S . . . . . . 128157 TATACTCCAAAGGATGAATACGATAAGGTAGATGTGTTACGAATTATAAAACGAGTTATC Y T P K D E Y D K V D V L R I I K R V I I L Q R M N T I R - M C Y E L - N E L S I Y S K G - I R - G R C V T N Y K T S Y . . . . . . 128097 ACTCGGTGTGTCATTGCTTCGCTGATATAGTTGCCGAGATGGAACTGTTTTGGGGAGGGG T R C V I A S L I - L P R W N C F G E G L G V S L L R - Y S C R D G T V L G R G H S V C H C F A D I V A E M E L F W G G . . . . . . 128037 GCTGTTTAATATGATTCTTTGGGTTATATGTGTTATTGGTATTGTTGTGGATAATTTGGA A V - Y D S L G Y M C Y W Y C C G - F G L F N M I L W V I C V I G I V V D N L D G C L I - F F G L Y V L L V L L W I I W . . . . . . 127977 TTGTTGTCGGATTGGGACGAAGTAAGGAAAATAGGGGAGGTGCTGCCGAATTTTCGTTAG L L S D W D E V R K I G E V L P N F R - C C R I G T K - G K - G R C C R I F V R I V V G L G R S K E N R G G A A E F S L . . . . . . 127917 ATTATTAGCTAGCTTACAAGAAAGTAAAGCACGATGTTTATCTAATTGCGGCACGATTGT I I S - L T R K - S T M F I - L R H D C L L A S L Q E S K A R C L S N C G T I V D Y - L A Y K K V K H D V Y L I A A R L . . . . . . 127857 TGCTTGTTATAGATTAATAGCTTGAGCAGTAAATATTGGACGTGCGGCTCGATTATACGG C L L - I N S L S S K Y W T C G S I I R A C Y R L I A - A V N I G R A A R L Y G L L V I D - - L E Q - I L D V R L D Y T . . . . . 127797 TATGTAACGCTGTCCCTTCTTTCTTTGCTTGGCATGACTTT Y V T L S L L S L L G M T M - R C P F F L C L A - L V C N A V P S F F A W H D F Maximal non-overlapping open reading frames (>= 64 codons): none 3-phase translation of AGS-6 (+strand): . . . . . . 127757 AAAGTCATGCCAAGCAAAGAAAGAAGGGACAGCGTTACATACCGTATAATCGAGCCGCAC K V M P S K E R R D S V T Y R I I E P H K S C Q A K K E G T A L H T V - S S R T S H A K Q R K K G Q R Y I P Y N R A A . . . . . . 127817 GTCCAATATTTACTGCTCAAGCTATTAATCTATAACAAGCAACAATCGTGCCGCAATTAG V Q Y L L L K L L I Y N K Q Q S C R N - S N I Y C S S Y - S I T S N N R A A I R R P I F T A Q A I N L - Q A T I V P Q L . . . . . . 127877 ATAAACATCGTGCTTTACTTTCTTGTAAGCTAGCTAATAATCTAACGAAAATTCGGCAGC I N I V L Y F L V S - L I I - R K F G S - T S C F T F L - A S - - S N E N S A A D K H R A L L S C K L A N N L T K I R Q . . . . . . 127937 ACCTCCCCTATTTTCCTTACTTCGTCCCAATCCGACAACAATCCAAATTATCCACAACAA T S P I F L T S S Q S D N N P N Y P Q Q P P L F S L L R P N P T T I Q I I H N N H L P Y F P Y F V P I R Q Q S K L S T T . . . . . . 127997 TACCAATAACACATATAACCCAAAGAATCATATTAAACAGCCCCCTCCCCAAAACAGTTC Y Q - H I - P K E S Y - T A P S P K Q F T N N T Y N P K N H I K Q P P P Q N S S I P I T H I T Q R I I L N S P L P K T V . . . . . . 128057 CATCTCGGCAACTATATCAGCGAAGCAATGACACACCGAGTGATAACTCGTTTTATAATT H L G N Y I S E A M T H R V I T R F I I I S A T I S A K Q - H T E - - L V L - F P S R Q L Y Q R S N D T P S D N S F Y N . . . . . . 128117 CGTAACACATCTACCTTATCGTATTCATCCTTTGGAGTATATACTCATAATCACATTCAA R N T S T L S Y S S F G V Y T H N H I Q V T H L P Y R I H P L E Y I L I I T F N S - H I Y L I V F I L W S I Y S - S H S . . . . . . 128177 CATATACATAATGCCAAAACAGAATTTTCCTGCAGTTTGCTTTAATCAAAACAGCCCAAG H I H N A K T E F S C S L L - S K Q P K I Y I M P K Q N F P A V C F N Q N S P S T Y T - C Q N R I F L Q F A L I K T A Q . . . . . . 128237 CACCAACACGACACCACTAATAATCCGATTATGGTTTCCATTCATACTTAGTACATTCAA H Q H D T T N N P I M V S I H T - Y I Q T N T T P L I I R L W F P F I L S T F N A P T R H H - - S D Y G F H S Y L V H S . . . . . . 128297 TAACTAAAACAAACTTCCTAAGCTACTGGTCACGCCCCCTTCTTAAAATTAATGGATAAT - L K Q T S - A T G H A P F L K L M D N N - N K L P K L L V T P P S - N - W I I I T K T N F L S Y W S R P L L K I N G - . . . . . . 128357 TAACAAGGGTATTCTAAAGAATTAACACACCAAACAAGGAGATTACTAACCAAATTATTT - Q G Y S K E L T H Q T R R L L T K L F N K G I L K N - H T K Q G D Y - P N Y L L T R V F - R I N T P N K E I T N Q I I . . . . . 128417 GCAGCTGCTGGCCAAGAGTTGCAGGGTTGGTTTCTCCATTT A A A G Q E L Q G W F L H Q L L A K S C R V G F S I C S C W P R V A G L V S P F Maximal non-overlapping open reading frames (>= 64 codons): >C10HBa0115K16.1+_PGL-12_AGS-6_PPS_1 (127852 128121) (frame '0'; 267 bp, 89 residues) 1 QATIVPQLDK HRALLSCKLA NNLTKIRQHL PYFPYFVPIR QQSKLSTTIP ITHITQRIIL 61 NSPLPKTVPS RQLYQRSNDT PSDNSFYNS- PGL 13 (- strand): 133097 131308 AGS-1 (132037 131308) SCR (e 0.963) Exon 1 132037 131308 ( 730 n); score: 0.963 PGS (132037 131308) SGN-E379982- PGS (131828 131308) SGN-E201553- 3-phase translation of AGS-1 (-strand): . . . . . . 132037 AAAGGTAAGTTCATTTCATACCTCAAGGCCGGGAAGATGGTTAGAAAAGGCTATATTTAC K G K F I S Y L K A G K M V R K G Y I Y K V S S F H T S R P G R W L E K A I F T R - V H F I P Q G R E D G - K R L Y L . . . . . . 131977 CATCTGATTCGGGTGCATGACATAAAGGCAGAGGCACCGACTCTTCAATCAGTCCCGGTA H L I R V H D I K A E A P T L Q S V P V I - F G C M T - R Q R H R L F N Q S R - P S D S G A - H K G R G T D S S I S P G . . . . . . 131917 GTTAATGAATTTCCTGATGTATTCCCCGAGGAACTTCCAGGCCTTCCTCCAGAACGGGAG V N E F P D V F P E E L P G L P P E R E L M N F L M Y S P R N F Q A F L Q N G R S - - I S - C I P R G T S R P S S R T G . . . . . . 131857 ATAGAGTTTACTATAGATGTACTGCCAGATACCCAGCCTATATCTATACCTCCTTTTAGA I E F T I D V L P D T Q P I S I P P F R - S L L - M Y C Q I P S L Y L Y L L L E D R V Y Y R C T A R Y P A Y I Y T S F - . . . . . . 131797 ATGGCACCTGCTGAGTTGAAAGAATTGAAAGAGCAATTGAGGGATTTGCTAGAAAAGGGC M A P A E L K E L K E Q L R D L L E K G W H L L S - K N - K S N - G I C - K R A N G T C - V E R I E R A I E G F A R K G . . . . . . 131737 TTCATCAGGCCTAGTACGTCACCTTGGGGAGCACCAGTACTGTTTGTGAGGAAGAAGGAT F I R P S T S P W G A P V L F V R K K D S S G L V R H L G E H Q Y C L - G R R M L H Q A - Y V T L G S T S T V C E E E G . . . . . . 131677 GGGTCGCTGCGGATGTGCATTGATTATAGGCAGTTGAACAAAGTAACAATAAAGAACAGG G S L R M C I D Y R Q L N K V T I K N R G R C G C A L I I G S - T K - Q - R T G W V A A D V H - L - A V E Q S N N K E Q . . . . . . 131617 TATCCCCTCCCAAGGATTGACGATCTATTTGACCAGTTGCAGGGTGCAAAGTGTTTTTCA Y P L P R I D D L F D Q L Q G A K C F S I P S Q G L T I Y L T S C R V Q S V F Q V S P P K D - R S I - P V A G C K V F F . . . . . . 131557 AAGATAGACTTGCGGTCAGGTTATCATCAGGTGCGGGTAAGGGAGGCAGATATTCCAAAG K I D L R S G Y H Q V R V R E A D I P K R - T C G Q V I I R C G - G R Q I F Q R K D R L A V R L S S G A G K G G R Y S K . . . . . . 131497 ACAGCATTCCGGACCCGATATGGGCATTATGAGTTTAGAGTGCTGTCTTTTGGGCTGACT T A F R T R Y G H Y E F R V L S F G L T Q H S G P D M G I M S L E C C L L G - L D S I P D P I W A L - V - S A V F W A D . . . . . . 131437 AATGCTCCAGCGGTATTCATGGATTTAATGAATCGAGTATTTAAACCATTCCTTGATATG N A P A V F M D L M N R V F K P F L D M M L Q R Y S W I - - I E Y L N H S L I C - C S S G I H G F N E S S I - T I P - Y . . . . . . 131377 TTTGTTATTGTATTTATAGACGATATTCTGGTCTATTCACGTTCAGAAGAGGAGCATGCA F V I V F I D D I L V Y S R S E E E H A L L L Y L - T I F W S I H V Q K R S M Q V C Y C I Y R R Y S G L F T F R R G A C . 131317 GATCATTTAA D H L I I - R S F Maximal non-overlapping open reading frames (>= 64 codons): >C10HBa0115K16.1-_PGL-13_AGS-1_PPS_1 (132037 131309) (frame '1'; 729 bp, 243 residues) 1 KGKFISYLKA GKMVRKGYIY HLIRVHDIKA EAPTLQSVPV VNEFPDVFPE ELPGLPPERE 61 IEFTIDVLPD TQPISIPPFR MAPAELKELK EQLRDLLEKG FIRPSTSPWG APVLFVRKKD 121 GSLRMCIDYR QLNKVTIKNR YPLPRIDDLF DQLQGAKCFS KIDLRSGYHQ VRVREADIPK 181 TAFRTRYGHY EFRVLSFGLT NAPAVFMDLM NRVFKPFLDM FVIVFIDDIL VYSRSEEEHA 241 DHL 3-phase translation of AGS-1 (+strand): . . . . . . 131308 TTAAATGATCTGCATGCTCCTCTTCTGAACGTGAATAGACCAGAATATCGTCTATAAATA L N D L H A P L L N V N R P E Y R L - I - M I C M L L F - T - I D Q N I V Y K Y K - S A C S S S E R E - T R I S S I N . . . . . . 131368 CAATAACAAACATATCAAGGAATGGTTTAAATACTCGATTCATTAAATCCATGAATACCG Q - Q T Y Q G M V - I L D S L N P - I P N N K H I K E W F K Y S I H - I H E Y R T I T N I S R N G L N T R F I K S M N T . . . . . . 131428 CTGGAGCATTAGTCAGCCCAAAAGACAGCACTCTAAACTCATAATGCCCATATCGGGTCC L E H - S A Q K T A L - T H N A H I G S W S I S Q P K R Q H S K L I M P I S G P A G A L V S P K D S T L N S - C P Y R V . . . . . . 131488 GGAATGCTGTCTTTGGAATATCTGCCTCCCTTACCCGCACCTGATGATAACCTGACCGCA G M L S L E Y L P P L P A P D D N L T A E C C L W N I C L P Y P H L M I T - P Q R N A V F G I S A S L T R T - - - P D R . . . . . . 131548 AGTCTATCTTTGAAAAACACTTTGCACCCTGCAACTGGTCAAATAGATCGTCAATCCTTG S L S L K N T L H P A T G Q I D R Q S L V Y L - K T L C T L Q L V K - I V N P W K S I F E K H F A P C N W S N R S S I L . . . . . . 131608 GGAGGGGATACCTGTTCTTTATTGTTACTTTGTTCAACTGCCTATAATCAATGCACATCC G G D T C S L L L L C S T A Y N Q C T S E G I P V L Y C Y F V Q L P I I N A H P G R G Y L F F I V T L F N C L - S M H I . . . . . . 131668 GCAGCGACCCATCCTTCTTCCTCACAAACAGTACTGGTGCTCCCCAAGGTGACGTACTAG A A T H P S S S Q T V L V L P K V T Y - Q R P I L L P H K Q Y W C S P R - R T R R S D P S F F L T N S T G A P Q G D V L . . . . . . 131728 GCCTGATGAAGCCCTTTTCTAGCAAATCCCTCAATTGCTCTTTCAATTCTTTCAACTCAG A - - S P F L A N P S I A L S I L S T Q P D E A L F - Q I P Q L L F Q F F Q L S G L M K P F S S K S L N C S F N S F N S . . . . . . 131788 CAGGTGCCATTCTAAAAGGAGGTATAGATATAGGCTGGGTATCTGGCAGTACATCTATAG Q V P F - K E V - I - A G Y L A V H L - R C H S K R R Y R Y R L G I W Q Y I Y S A G A I L K G G I D I G W V S G S T S I . . . . . . 131848 TAAACTCTATCTCCCGTTCTGGAGGAAGGCCTGGAAGTTCCTCGGGGAATACATCAGGAA - T L S P V L E E G L E V P R G I H Q E K L Y L P F W R K A W K F L G E Y I R K V N S I S R S G G R P G S S S G N T S G . . . . . . 131908 ATTCATTAACTACCGGGACTGATTGAAGAGTCGGTGCCTCTGCCTTTATGTCATGCACCC I H - L P G L I E E S V P L P L C H A P F I N Y R D - L K S R C L C L Y V M H P N S L T T G T D - R V G A S A F M S C T . . . . . . 131968 GAATCAGATGGTAAATATAGCCTTTTCTAACCATCTTCCCGGCCTTGAGGTATGAAATGA E S D G K Y S L F - P S S R P - G M K - N Q M V N I A F S N H L P G L E V - N E R I R W - I - P F L T I F P A L R Y E M . 132028 ACTTACCTTT T Y L L T F N L P Maximal non-overlapping open reading frames (>= 64 codons): >C10HBa0115K16.1+_PGL-13_AGS-1_PPS_1 (131655 131933) (frame '0'; 276 bp, 92 residues) 1 SMHIRSDPSF FLTNSTGAPQ GDVLGLMKPF SSKSLNCSFN SFNSAGAILK GGIDIGWVSG 61 STSIVNSISR SGGRPGSSSG NTSGNSLTTG TD- >C10HBa0115K16.1+_PGL-13_AGS-1_PPS_2 (131464 131727) (frame '1'; 261 bp, 87 residues) 1 THNAHIGSGM LSLEYLPPLP APDDNLTASL SLKNTLHPAT GQIDRQSLGG DTCSLLLLCS 61 TAYNQCTSAA THPSSSQTVL VLPKVTY- AGS-2 (132879 132282) SCR (e 0.967) Exon 1 132879 132282 ( 598 n); score: 0.967 PGS (132879 132282) SGN-E350824- 3-phase translation of AGS-2 (-strand): . . . . . . 132879 AGCATGTTAGATTTTCTTCCCAGCCAGCACAGAGTGCACCCCCACGTTTCATGGGTAGGG S M L D F L P S Q H R V H P H V S W V G A C - I F F P A S T E C T P T F H G - G H V R F S S Q P A Q S A P P R F M G R . . . . . . 132819 GGTTCGATCGTATGGGATATTCAGAACCTGGTCAGAGCTCTAGGGCGTCAGGGTCACAGA G S I V W D I Q N L V R A L G R Q G H R V R S Y G I F R T W S E L - G V R V T D G F D R M G Y S E P G Q S S R A S G S Q . . . . . . 132759 TGGGCAGGGGTTTGAGCCAGTCGAGGCCACCTTTGCCTCGGTGTTCTCGTTGTGGTAAGT W A G V - A S R G H L C L G V L V V V S G Q G F E P V E A T F A S V F S L W - V M G R G L S Q S R P P L P R C S R C G K . . . . . . 132699 CCCATCCTGGGGAATGTCGTTGGGCTACAGGTGCGTGTTTTTCTTGCGGACGTCAGGGCC P I L G N V V G L Q V R V F L A D V R A P S W G M S L G Y R C V F F L R T S G P S H P G E C R W A T G A C F S C G R Q G . . . . . . 132639 ATACTATGAGGGAGTGTCACCTTAGAGGTAGTGCAGGTGGTATGACACAGCCTACAGGGT I L - G S V T L E V V Q V V - H S L Q G Y Y E G V S P - R - C R W Y D T A Y R V H T M R E C H L R G S A G G M T Q P T G . . . . . . 132579 CCATTGCTGGTTCATCTTCTTCTGTGGCTATGCGCCCTACGGGGCAGGGTATTCAGGCAC P L L V H L L L W L C A L R G R V F R H H C W F I F F C G Y A P Y G A G Y S G T S I A G S S S S V A M R P T G Q G I Q A . . . . . . 132519 CAGCAGGCCGTGGTAGAGGACGTGGTGGAGCTTCCAGTTCTAGCGGTCCCTCAAACCGTA Q Q A V V E D V V E L P V L A V P Q T V S R P W - R T W W S F Q F - R S L K P Y P A G R G R G R G G A S S S S G P S N R . . . . . . 132459 TATATGCTTTGACTAATAGGCAAGATCAAGAGGCGTCACCTAATGTGATCACAGGTATAT Y M L - L I G K I K R R H L M - S Q V Y I C F D - - A R S R G V T - C D H R Y I I Y A L T N R Q D Q E A S P N V I T G I . . . . . . 132399 TATCACTATTCTCCCGAAGTGTGTATGCATTGATAGACCCAGGTTCCACCTTATCATATA Y H Y S P E V C M H - - T Q V P P Y H I I T I L P K C V C I D R P R F H L I I Y L S L F S R S V Y A L I D P G S T L S Y . . . . . . 132339 TATCTCCCTTTGTTGCTAGTAGGATCGGAATAGAGTCTGAGTTGATAGAACCATTTGA Y L P L L L V G S E - S L S - - N H L I S L C C - - D R N R V - V D R T I - I S P F V A S R I G I E S E L I E P F Maximal non-overlapping open reading frames (>= 64 codons): >C10HBa0115K16.1-_PGL-13_AGS-2_PPS_1 (132877 132284) (frame '0'; 594 bp, 198 residues) 1 HVRFSSQPAQ SAPPRFMGRG FDRMGYSEPG QSSRASGSQM GRGLSQSRPP LPRCSRCGKS 61 HPGECRWATG ACFSCGRQGH TMRECHLRGS AGGMTQPTGS IAGSSSSVAM RPTGQGIQAP 121 AGRGRGRGGA SSSSGPSNRI YALTNRQDQE ASPNVITGIL SLFSRSVYAL IDPGSTLSYI 181 SPFVASRIGI ESELIEPF 3-phase translation of AGS-2 (+strand): . . . . . . 132282 TCAAATGGTTCTATCAACTCAGACTCTATTCCGATCCTACTAGCAACAAAGGGAGATATA S N G S I N S D S I P I L L A T K G D I Q M V L S T Q T L F R S Y - Q Q R E I Y K W F Y Q L R L Y S D P T S N K G R Y . . . . . . 132342 TATGATAAGGTGGAACCTGGGTCTATCAATGCATACACACTTCGGGAGAATAGTGATAAT Y D K V E P G S I N A Y T L R E N S D N M I R W N L G L S M H T H F G R I V I I I - - G G T W V Y Q C I H T S G E - - - . . . . . . 132402 ATACCTGTGATCACATTAGGTGACGCCTCTTGATCTTGCCTATTAGTCAAAGCATATATA I P V I T L G D A S - S C L L V K A Y I Y L - S H - V T P L D L A Y - S K H I Y Y T C D H I R - R L L I L P I S Q S I Y . . . . . . 132462 CGGTTTGAGGGACCGCTAGAACTGGAAGCTCCACCACGTCCTCTACCACGGCCTGCTGGT R F E G P L E L E A P P R P L P R P A G G L R D R - N W K L H H V L Y H G L L V T V - G T A R T G S S T T S S T T A C W . . . . . . 132522 GCCTGAATACCCTGCCCCGTAGGGCGCATAGCCACAGAAGAAGATGAACCAGCAATGGAC A - I P C P V G R I A T E E D E P A M D P E Y P A P - G A - P Q K K M N Q Q W T C L N T L P R R A H S H R R R - T S N G . . . . . . 132582 CCTGTAGGCTGTGTCATACCACCTGCACTACCTCTAAGGTGACACTCCCTCATAGTATGG P V G C V I P P A L P L R - H S L I V W L - A V S Y H L H Y L - G D T P S - Y G P C R L C H T T C T T S K V T L P H S M . . . . . . 132642 CCCTGACGTCCGCAAGAAAAACACGCACCTGTAGCCCAACGACATTCCCCAGGATGGGAC P - R P Q E K H A P V A Q R H S P G W D P D V R K K N T H L - P N D I P Q D G T A L T S A R K T R T C S P T T F P R M G . . . . . . 132702 TTACCACAACGAGAACACCGAGGCAAAGGTGGCCTCGACTGGCTCAAACCCCTGCCCATC L P Q R E H R G K G G L D W L K P L P I Y H N E N T E A K V A S T G S N P C P S L T T T R T P R Q R W P R L A Q T P A H . . . . . . 132762 TGTGACCCTGACGCCCTAGAGCTCTGACCAGGTTCTGAATATCCCATACGATCGAACCCC C D P D A L E L - P G S E Y P I R S N P V T L T P - S S D Q V L N I P Y D R T P L - P - R P R A L T R F - I S H T I E P . . . . . . 132822 CTACCCATGAAACGTGGGGGTGCACTCTGTGCTGGCTGGGAAGAAAATCTAACATGCT L P M K R G G A L C A G W E E N L T C Y P - N V G V H S V L A G K K I - H A P T H E T W G C T L C W L G R K S N M Maximal non-overlapping open reading frames (>= 64 codons): >C10HBa0115K16.1+_PGL-13_AGS-2_PPS_1 (132569 132766) (frame '0'; 195 bp, 65 residues) 1 TSNGPCRLCH TTCTTSKVTL PHSMALTSAR KTRTCSPTTF PRMGLTTTRT PRQRWPRLAQ 61 TPAHL- AGS-3 (133097 132902) SCR (e 0.939) Exon 1 133097 132902 ( 196 n); score: 0.939 PGS (133097 132902) SGN-E379248+ 3-phase translation of AGS-3 (-strand): . . . . . . 133097 CATCGTTATGTGATGGGATTGGATCGTTATCTGATTGACGGTTGTATGGCAGTGACTCTT H R Y V M G L D R Y L I D G C M A V T L I V M - W D W I V I - L T V V W Q - L F S L C D G I G S L S D - R L Y G S D S . . . . . . 133037 CAGCCAGGTATGGACATTGCTCGGGTGCAGGCATATGCACAGGGGGTAGAGGATCGGCAC Q P G M D I A R V Q A Y A Q G V E D R H S Q V W T L L G C R H M H R G - R I G T S A R Y G H C S G A G I C T G G R G S A . . . . . . 132977 CGGGGACGTCAGCCAGATAGAGATTATAATAGAGGCCAGCATAAGAGGGCTAGATCAGCA R G R Q P D R D Y N R G Q H K R A R S A G D V S Q I E I I I E A S I R G L D Q Q P G T S A R - R L - - R P A - E G - I S . . 132917 GGTTATCCTGACGAGT G Y P D E V I L T S R L S - R Maximal non-overlapping open reading frames (>= 64 codons): >C10HBa0115K16.1-_PGL-13_AGS-3_PPS_1 (133097 132903) (frame '1'; 195 bp, 65 residues) 1 HRYVMGLDRY LIDGCMAVTL QPGMDIARVQ AYAQGVEDRH RGRQPDRDYN RGQHKRARSA 61 GYPDE 3-phase translation of AGS-3 (+strand): . . . . . . 132902 ACTCGTCAGGATAACCTGCTGATCTAGCCCTCTTATGCTGGCCTCTATTATAATCTCTAT T R Q D N L L I - P S Y A G L Y Y N L Y L V R I T C - S S P L M L A S I I I S I S S G - P A D L A L L C W P L L - S L . . . . . . 132962 CTGGCTGACGTCCCCGGTGCCGATCCTCTACCCCCTGTGCATATGCCTGCACCCGAGCAA L A D V P G A D P L P P V H M P A P E Q W L T S P V P I L Y P L C I C L H P S N S G - R P R C R S S T P C A Y A C T R A . . . . . . 133022 TGTCCATACCTGGCTGAAGAGTCACTGCCATACAACCGTCAATCAGATAACGATCCAATC C P Y L A E E S L P Y N R Q S D N D P I V H T W L K S H C H T T V N Q I T I Q S M S I P G - R V T A I Q P S I R - R S N . . 133082 CCATCACATAACGATG P S H N D H H I T M P I T - R Maximal non-overlapping open reading frames (>= 64 codons): none PGL 14 (- strand): 135961 134107 AGS-1 (135961 135893,135338 135292,134567 134235,134114 134107) SCR (e 0.862 d 0.900 a 0.868,e 0.979 d 0.991 a 0.000,e 0.905 d 0.086 a 0.922,e 0.750) Exon 1 135961 135893 ( 69 n); score: 0.862 Intron 1 135892 135339 ( 554 n); Pd: 0.900 Pa: 0.868 Exon 2 135338 135292 ( 47 n); score: 0.979 Intron 2 135291 134568 ( 724 n); Pd: 0.991 Pa: 0.000 Exon 3 134567 134235 ( 333 n); score: 0.905 Intron 3 134234 134115 ( 120 n); Pd: 0.086 Pa: 0.922 Exon 4 134114 134107 ( 8 n); score: 0.750 PGS (135961 135893,135338 135292,134567 134235,134114 134107) SGN-E543103- PGS (135961 135893,135338 135292,134567 134235,134114 134107) SGN-E543104+ PGS (134568 134235,134114 134107) SGN-E225616- PGS (134567 134235,134114 134107) SGN-E306317+ PGS (134567 134235,134114 134107) SGN-E303695+ PGS (134567 134235) SGN-E303256+ 3-phase translation of AGS-1 (-strand): . . . . . . 135961 GGCAGCCATGGAAATGGAGAAACCAACCCTGCAACTCTTGGCCAGCAGCTGCAAATAATT G S H G N G E T N P A T L G Q Q L Q I I A A M E M E K P T L Q L L A S S C K - F Q P W K W R N Q P C N S W P A A A N N . : . . . . . : 135901 TGGTTAGTA : ATTAATAGCTTGAGCAGTAAATATTGGACGTGCGGCTCGATTATACG : GTGT W L V : I N S L S S K Y W T C G S I I R : C G - - : L I A - A V N I G R A A R L Y : G V L V S : N - - L E Q - I L D V R L D Y T : V . . . . . . 134563 AGACGCGCAGTTCGGTGATCCTCCCGCCTAGGATATCTACTCTGCTGATTGGGAGAGCTC R R A V R - S S R L G Y L L C - L G E L D A Q F G D P P A - D I Y S A D W E S S - T R S S V I L P P R I S T L L I G R A . . . . . . 134503 CACTGTTCCGGAGCCCATTCGTTTTGGTACATAACTTTTGTGTAGTCTTTTGCTCGTCTA H C S G A H S F W Y I T F V - S F A R L T V P E P I R F G T - L L C S L L L V Y P L F R S P F V L V H N F C V V F C S S . . . . . . 134443 TGGGTATGGCGGGGCCCTGTCCCGTCGAGTTTCACTAATGTACCCTTAGAGGTCTGTGGA W V W R G P V P S S F T N V P L E V C G G Y G G A L S R R V S L M Y P - R S V D M G M A G P C P V E F H - C T L R G L W . . . . . . 134383 CATTATGTGGGTTGTATATATATGTTTTGGATAATGGTCTGGACATGGTTTGTTTGGGAT H Y V G C I Y M F W I M V W T W F V W D I M W V V Y I C F G - W S G H G L F G M T L C G L Y I Y V L D N G L D M V C L G . . . . . . 134323 GTCCGCTTGTACAGGGGCAGCCTTGTCGGCTGTGTACATCATTATGCTTTGAATAGTGGC V R L Y R G S L V G C V H H Y A L N S G S A C T G A A L S A V Y I I M L - I V A C P L V Q G Q P C R L C T S L C F E - W . . . : . 134263 GGCCTTGTCGGCTCGCGTATGCTGTTATG : GTTTGTAT G L V G S R M L L W : F V A L S A R V C C Y : G L Y R P C R L A Y A V M : V C Maximal non-overlapping open reading frames (>= 64 codons): >C10HBa0115K16.1-_PGL-14_AGS-1_PPS_1 (134458 134235,134114 134108) (frame '1'; 231 bp, 77 residues) 1 SFARLWVWRG PVPSSFTNVP LEVCGHYVGC IYMFWIMVWT WFVWDVRLYR GSLVGCVHHY 61 ALNSGGLVGS RMLLWFV AGS-2 (135959 135900,135338 135292,134567 134235,134114 134107) SCR (e 0.842 d 0.997 a 0.868,e 0.894 d 0.991 a 0.000,e 0.905 d 0.086 a 0.922,e 0.750) Exon 1 135959 135900 ( 60 n); score: 0.842 Intron 1 135899 135339 ( 561 n); Pd: 0.997 Pa: 0.868 Exon 2 135338 135292 ( 47 n); score: 0.894 Intron 2 135291 134568 ( 724 n); Pd: 0.991 Pa: 0.000 Exon 3 134567 134235 ( 333 n); score: 0.905 Intron 3 134234 134115 ( 120 n); Pd: 0.086 Pa: 0.922 Exon 4 134114 134107 ( 8 n); score: 0.750 PGS (135959 135900,135338 135292,134567 134235,134114 134107) SGN-E374134- PGS (135958 135900,135338 135292,134567 134235,134114 134107) SGN-E305738+ PGS (135958 135900,135338 135292,134567 134235,134114 134107) SGN-E374135+ PGS (135958 135900,135338 135292,134567 134235) SGN-E310669+ 3-phase translation of AGS-2 (-strand): . . . . . . : 135959 CAGCCATGGAAATGGAGAAACCAACCCTGCAACTCTTGGCCAGCAGCTGCAAATAATTTG : Q P W K W R N Q P C N S W P A A A N N L : S H G N G E T N P A T L G Q Q L Q I I - : A M E M E K P T L Q L L A S S C K - F : . . . . . : . 135338 ATTAATAGCTTGAGCAGTAAATATTGGACGTGCGGCTCGATTATACG : GTGTAGACGCGCA I N S L S S K Y W T C G S I I R : C R R A L I A - A V N I G R A A R L Y : G V D A Q D - - L E Q - I L D V R L D Y T : V - T R . . . . . . 134554 GTTCGGTGATCCTCCCGCCTAGGATATCTACTCTGCTGATTGGGAGAGCTCCACTGTTCC V R - S S R L G Y L L C - L G E L H C S F G D P P A - D I Y S A D W E S S T V P S S V I L P P R I S T L L I G R A P L F . . . . . . 134494 GGAGCCCATTCGTTTTGGTACATAACTTTTGTGTAGTCTTTTGCTCGTCTATGGGTATGG G A H S F W Y I T F V - S F A R L W V W E P I R F G T - L L C S L L L V Y G Y G R S P F V L V H N F C V V F C S S M G M . . . . . . 134434 CGGGGCCCTGTCCCGTCGAGTTTCACTAATGTACCCTTAGAGGTCTGTGGACATTATGTG R G P V P S S F T N V P L E V C G H Y V G A L S R R V S L M Y P - R S V D I M W A G P C P V E F H - C T L R G L W T L C . . . . . . 134374 GGTTGTATATATATGTTTTGGATAATGGTCTGGACATGGTTTGTTTGGGATGTCCGCTTG G C I Y M F W I M V W T W F V W D V R L V V Y I C F G - W S G H G L F G M S A C G L Y I Y V L D N G L D M V C L G C P L . . . . . . 134314 TACAGGGGCAGCCTTGTCGGCTGTGTACATCATTATGCTTTGAATAGTGGCGGCCTTGTC Y R G S L V G C V H H Y A L N S G G L V T G A A L S A V Y I I M L - I V A A L S V Q G Q P C R L C T S L C F E - W R P C . . : . 134254 GGCTCGCGTATGCTGTTATG : GTTTGTAT G S R M L L W : F V A R V C C Y : G L Y R L A Y A V M : V C Maximal non-overlapping open reading frames (>= 64 codons): >C10HBa0115K16.1-_PGL-14_AGS-2_PPS_1 (134458 134235,134114 134108) (frame '1'; 231 bp, 77 residues) 1 SFARLWVWRG PVPSSFTNVP LEVCGHYVGC IYMFWIMVWT WFVWDVRLYR GSLVGCVHHY 61 ALNSGGLVGS RMLLWFV AGS-3 (135942 135900,134938 134744,134567 134164) SCR (e 0.837 d 0.997 a 0.963,e 0.933 d 0.000 a 0.000,e 0.899) Exon 1 135942 135900 ( 43 n); score: 0.837 Intron 1 135899 134939 ( 961 n); Pd: 0.997 Pa: 0.963 Exon 2 134938 134744 ( 195 n); score: 0.933 Intron 2 134743 134568 ( 176 n); Pd: 0.000 Pa: 0.000 Exon 3 134567 134164 ( 404 n); score: 0.899 PGS (134294 134164) SGN-E538150- PGS (135942 135900,134938 134744,134567 134235) SGN-E538151+ PGS (135942 135900,134938 134744,134567 134235) SGN-E538156+ PGS (135942 135900,134938 134744,134567 134337) SGN-E268096+ 3-phase translation of AGS-3 (-strand): . . . . . : . 135942 AAACCAACCCTGCAACTCTTGGCCAGCAGCTGCAAATAATTTG : AGTCATTTATCATTTCA K P T L Q L L A S S C K - F : E S F I I S N Q P C N S W P A A A N N L : S H L S F H T N P A T L G Q Q L Q I I - : V I Y H F . . . . . . 134921 CCGAGTCCCGGGCCGGGTAATGTTCGTGCGGAGTTTCTTGCATATGTCACCGAGTTCCTC P S P G P G N V R A E F L A Y V T E F L R V P G R V M F V R S F L H M S P S S S T E S R A G - C S C G V S C I C H R V P . . . . . . 134861 ACTAGAGGGCCGGGTATGTATATTATATATATGATTGGTGATGAGGATGGTTATGATGAT T R G P G M Y I I Y M I G D E D G Y D D L E G R V C I L Y I - L V M R M V M M M H - R A G Y V Y Y I Y D W - - G W L - - . . . . . . : 134801 GATGATGACGGAGATGACGTGATGATTATTTTGCCGAGCCCCTTACTAGGGAAGCTGG : GT D D D G D D V M I I L P S P L L G K L : G M M T E M T - - L F C R A P Y - G S W : V - - - R R - R D D Y F A E P L T R E A G : . . . . . . 134565 GTAGACGCGCAGTTCGGTGATCCTCCCGCCTAGGATATCTACTCTGCTGATTGGGAGAGC V D A Q F G D P P A - D I Y S A D W E S - T R S S V I L P P R I S T L L I G R A C R R A V R - S S R L G Y L L C - L G E . . . . . . 134505 TCCACTGTTCCGGAGCCCATTCGTTTTGGTACATAACTTTTGTGTAGTCTTTTGCTCGTC S T V P E P I R F G T - L L C S L L L V P L F R S P F V L V H N F C V V F C S S L H C S G A H S F W Y I T F V - S F A R . . . . . . 134445 TATGGGTATGGCGGGGCCCTGTCCCGTCGAGTTTCACTAATGTACCCTTAGAGGTCTGTG Y G Y G G A L S R R V S L M Y P - R S V M G M A G P C P V E F H - C T L R G L W L W V W R G P V P S S F T N V P L E V C . . . . . . 134385 GACATTATGTGGGTTGTATATATATGTTTTGGATAATGGTCTGGACATGGTTTGTTTGGG D I M W V V Y I C F G - W S G H G L F G T L C G L Y I Y V L D N G L D M V C L G G H Y V G C I Y M F W I M V W T W F V W . . . . . . 134325 ATGTCCGCTTGTACAGGGGCAGCCTTGTCGGCTGTGTACATCATTATGCTTTGAATAGTG M S A C T G A A L S A V Y I I M L - I V C P L V Q G Q P C R L C T S L C F E - W D V R L Y R G S L V G C V H H Y A L N S . . . . . . 134265 GCGGCCTTGTCGGCTCGCGTATGCTGTTATGGTTGAATGGTTATGACTCCTTATGAGACA A A L S A R V C C Y G - M V M T P Y E T R P C R L A Y A V M V E W L - L L M R Q G G L V G S R M L L W L N G Y D S L - D . . . . . 134205 GGTCCTCTTATATATATATATATGACGTTGGGGTTGGCTTGA G P L I Y I Y M T L G L A - V L L Y I Y I - R W G W L R S S Y I Y I Y D V G V G L Maximal non-overlapping open reading frames (>= 64 codons): >C10HBa0115K16.1-_PGL-14_AGS-3_PPS_1 (134458 134210) (frame '0'; 246 bp, 82 residues) 1 SFARLWVWRG PVPSSFTNVP LEVCGHYVGC IYMFWIMVWT WFVWDVRLYR GSLVGCVHHY 61 ALNSGGLVGS RMLLWLNGYD SL- >C10HBa0115K16.1-_PGL-14_AGS-3_PPS_2 (135903 135900,134938 134744,134567 134533) (frame '1'; 231 bp, 77 residues) 1 FESFIISPSP GPGNVRAEFL AYVTEFLTRG PGMYIIYMIG DEDGYDDDDD GDDVMIILPS 61 PLLGKLGVDA QFGDPPA- AGS-4 (134883 134829,134783 134235) SCR (e 0.818 d 0.000 a 0.000,e 0.908) Exon 1 134883 134829 ( 55 n); score: 0.818 Intron 1 134828 134784 ( 45 n); Pd: 0.000 Pa: 0.000 Exon 2 134783 134235 ( 549 n); score: 0.908 PGS (134883 134829,134783 134235) SGN-E544254- 3-phase translation of AGS-4 (-strand): . . . . . . : 134883 TGCATATGTCACCGAGTTCCTCACTAGAGGGCCGGGTATGTATATTATATATATG : GTGAT C I C H R V P H - R A G Y V Y Y I Y : G D A Y V T E F L T R G P G M Y I I Y M : V M H M S P S S S L E G R V C I L Y I W : - . . . . . . 134778 GATTATTTTGCCGAGCCCCTTACTAGGGAAGCTGGGCACCTTAAATGTTAAATATATGCA D Y F A E P L T R E A G H L K C - I Y A I I L P S P L L G K L G T L N V K Y M H - L F C R A P Y - G S W A P - M L N I C . . . . . . 134718 TGATTTTCACTTAAAAAGTATATGTGTAGCGATATTTTGTTTCGAGTTGCCACATTGGTA - F S L K K Y M C S D I L F R V A T L V D F H L K S I C V A I F C F E L P H W Y M I F T - K V Y V - R Y F V S S C H I G . . . . . . 134658 TCCTGTCATCTTTACCTTATGCTTTACATACTCAGTACATTGTCCGTACTGACCCCCCCT S C H L Y L M L Y I L S T L S V L T P P P V I F T L C F T Y S V H C P Y - P P L I L S S L P Y A L H T Q Y I V R T D P P . . . . . . 134598 TTCCTCGGGGGGCTGCGTTTCATGCCCGCAGGTGTAGACGCGCAGTTCGGTGATCCTCCC F L G G L R F M P A G V D A Q F G D P P S S G G C V S C P Q V - T R S S V I L P F P R G A A F H A R R C R R A V R - S S . . . . . . 134538 GCCTAGGATATCTACTCTGCTGATTGGGAGAGCTCCACTGTTCCGGAGCCCATTCGTTTT A - D I Y S A D W E S S T V P E P I R F P R I S T L L I G R A P L F R S P F V L R L G Y L L C - L G E L H C S G A H S F . . . . . . 134478 GGTACATAACTTTTGTGTAGTCTTTTGCTCGTCTATGGGTATGGCGGGGCCCTGTCCCGT G T - L L C S L L L V Y G Y G G A L S R V H N F C V V F C S S M G M A G P C P V W Y I T F V - S F A R L W V W R G P V P . . . . . . 134418 CGAGTTTCACTAATGTACCCTTAGAGGTCTGTGGACATTATGTGGGTTGTATATATATGT R V S L M Y P - R S V D I M W V V Y I C E F H - C T L R G L W T L C G L Y I Y V S S F T N V P L E V C G H Y V G C I Y M . . . . . . 134358 TTTGGATAATGGTCTGGACATGGTTTGTTTGGGATGTCCGCTTGTACAGGGGCAGCCTTG F G - W S G H G L F G M S A C T G A A L L D N G L D M V C L G C P L V Q G Q P C F W I M V W T W F V W D V R L Y R G S L . . . . . . 134298 TCGGCTGTGTACATCATTATGCTTTGAATAGTGGCGGCCTTGTCGGCTCGCGTATGCTGT S A V Y I I M L - I V A A L S A R V C C R L C T S L C F E - W R P C R L A Y A V V G C V H H Y A L N S G G L V G S R M L . 134238 TATG Y M L Maximal non-overlapping open reading frames (>= 64 codons): >C10HBa0115K16.1-_PGL-14_AGS-4_PPS_1 (134882 134829,134783 134607) (frame '2'; 228 bp, 76 residues) 1 AYVTEFLTRG PGMYIIYMVM IILPSPLLGK LGTLNVKYMH DFHLKSICVA IFCFELPHWY 61 PVIFTLCFTY SVHCPY- >C10HBa0115K16.1-_PGL-14_AGS-4_PPS_2 (134458 134237) (frame '0'; 222 bp, 74 residues) 1 SFARLWVWRG PVPSSFTNVP LEVCGHYVGC IYMFWIMVWT WFVWDVRLYR GSLVGCVHHY 61 ALNSGGLVGS RMLL AGS-5 (135950 135250) SCR (e 0.859) Exon 1 135950 135250 ( 701 n); score: 0.859 PGS (135942 135250) SGN-E328093+ PGS (135950 135496) SGN-E298250+ 3-phase translation of AGS-5 (-strand): . . . . . . 135950 AAATGGAGAAACCAACCCTGCAACTCTTGGCCAGCAGCTGCAAATAATTTGGTTAGTAAT K W R N Q P C N S W P A A A N N L V S N N G E T N P A T L G Q Q L Q I I W L V I M E K P T L Q L L A S S C K - F G - - . . . . . . 135890 CTCCTTGTTTGGTGTGTTAATTCTTTAGAATACCCTTGTTAATTATCCATTAATTTTAAG L L V W C V N S L E Y P C - L S I N F K S L F G V L I L - N T L V N Y P L I L R S P C L V C - F F R I P L L I I H - F - . . . . . . 135830 AAGGGGGCGTGACCAGTAGCTTAGGAAGTTTGTTTTAGTTATTGAATGTACTAAGTATGA K G A - P V A - E V C F S Y - M Y - V - R G R D Q - L R K F V L V I E C T K Y E E G G V T S S L G S L F - L L N V L S M . . . . . . 135770 ATGGAAACCATAATCGGATTATTAGTGGTGTCGTGTTGGTGCTTGGGCTGTTTTGACTAA M E T I I G L L V V S C W C L G C F D - W K P - S D Y - W C R V G A W A V L T K N G N H N R I I S G V V L V L G L F - L . . . . . . 135710 AGCAAACTGCAGGAAAATTCTGTTTTGGCATTATGTATATGTTGAATGTGATTATGAGTA S K L Q E N S V L A L C I C - M - L - V A N C R K I L F W H Y V Y V E C D Y E Y K Q T A G K F C F G I M Y M L N V I M S . . . . . . 135650 TATACTCCAAAGGATGAATACGATAAGGTAGATGTGTTACGAATTATAAAACGAGTTATC Y T P K D E Y D K V D V L R I I K R V I I L Q R M N T I R - M C Y E L - N E L S I Y S K G - I R - G R C V T N Y K T S Y . . . . . . 135590 ACTCGGTGTGTCGTTGCTTCGCTGATATAGTTGCCGAGATGGAACTGTTTTGGGGAGGGG T R C V V A S L I - L P R W N C F G E G L G V S L L R - Y S C R D G T V L G R G H S V C R C F A D I V A E M E L F W G G . . . . . . 135530 GCTGTTTAATATGATTCTTTGGGTTATATGTGTTATTGGTATTGTTGTGGATAATTTGGA A V - Y D S L G Y M C Y W Y C C G - F G L F N M I L W V I C V I G I V V D N L D G C L I - F F G L Y V L L V L L W I I W . . . . . . 135470 TTGTTGTCGGATTGGGACGAAGTAAGGAAAATAGGGGAGGTGCTGCCGAATTTTCGTTAG L L S D W D E V R K I G E V L P N F R - C C R I G T K - G K - G R C C R I F V R I V V G L G R S K E N R G G A A E F S L . . . . . . 135410 ATTATTAGCTAGCTTACAAGAAAGTAAAGCACGATGTTTATCTAATTGCGGCACGATTGT I I S - L T R K - S T M F I - L R H D C L L A S L Q E S K A R C L S N C G T I V D Y - L A Y K K V K H D V Y L I A A R L . . . . . . 135350 TGCTTGTTATAGATTAATAGCTTGAGCAGTAAATATTGGACGTGCGGCTCGATTATACGG C L L - I N S L S S K Y W T C G S I I R A C Y R L I A - A V N I G R A A R L Y G L L V I D - - L E Q - I L D V R L D Y T . . . . . 135290 TATGTAACGCTGTCCCTTCTTTCTTTGCTTGGCATGACTTT Y V T L S L L S L L G M T M - R C P F F L C L A - L V C N A V P S F F A W H D F Maximal non-overlapping open reading frames (>= 64 codons): none 3-phase translation of AGS-5 (+strand): . . . . . . 135250 AAAGTCATGCCAAGCAAAGAAAGAAGGGACAGCGTTACATACCGTATAATCGAGCCGCAC K V M P S K E R R D S V T Y R I I E P H K S C Q A K K E G T A L H T V - S S R T S H A K Q R K K G Q R Y I P Y N R A A . . . . . . 135310 GTCCAATATTTACTGCTCAAGCTATTAATCTATAACAAGCAACAATCGTGCCGCAATTAG V Q Y L L L K L L I Y N K Q Q S C R N - S N I Y C S S Y - S I T S N N R A A I R R P I F T A Q A I N L - Q A T I V P Q L . . . . . . 135370 ATAAACATCGTGCTTTACTTTCTTGTAAGCTAGCTAATAATCTAACGAAAATTCGGCAGC I N I V L Y F L V S - L I I - R K F G S - T S C F T F L - A S - - S N E N S A A D K H R A L L S C K L A N N L T K I R Q . . . . . . 135430 ACCTCCCCTATTTTCCTTACTTCGTCCCAATCCGACAACAATCCAAATTATCCACAACAA T S P I F L T S S Q S D N N P N Y P Q Q P P L F S L L R P N P T T I Q I I H N N H L P Y F P Y F V P I R Q Q S K L S T T . . . . . . 135490 TACCAATAACACATATAACCCAAAGAATCATATTAAACAGCCCCCTCCCCAAAACAGTTC Y Q - H I - P K E S Y - T A P S P K Q F T N N T Y N P K N H I K Q P P P Q N S S I P I T H I T Q R I I L N S P L P K T V . . . . . . 135550 CATCTCGGCAACTATATCAGCGAAGCAACGACACACCGAGTGATAACTCGTTTTATAATT H L G N Y I S E A T T H R V I T R F I I I S A T I S A K Q R H T E - - L V L - F P S R Q L Y Q R S N D T P S D N S F Y N . . . . . . 135610 CGTAACACATCTACCTTATCGTATTCATCCTTTGGAGTATATACTCATAATCACATTCAA R N T S T L S Y S S F G V Y T H N H I Q V T H L P Y R I H P L E Y I L I I T F N S - H I Y L I V F I L W S I Y S - S H S . . . . . . 135670 CATATACATAATGCCAAAACAGAATTTTCCTGCAGTTTGCTTTAGTCAAAACAGCCCAAG H I H N A K T E F S C S L L - S K Q P K I Y I M P K Q N F P A V C F S Q N S P S T Y T - C Q N R I F L Q F A L V K T A Q . . . . . . 135730 CACCAACACGACACCACTAATAATCCGATTATGGTTTCCATTCATACTTAGTACATTCAA H Q H D T T N N P I M V S I H T - Y I Q T N T T P L I I R L W F P F I L S T F N A P T R H H - - S D Y G F H S Y L V H S . . . . . . 135790 TAACTAAAACAAACTTCCTAAGCTACTGGTCACGCCCCCTTCTTAAAATTAATGGATAAT - L K Q T S - A T G H A P F L K L M D N N - N K L P K L L V T P P S - N - W I I I T K T N F L S Y W S R P L L K I N G - . . . . . . 135850 TAACAAGGGTATTCTAAAGAATTAACACACCAAACAAGGAGATTACTAACCAAATTATTT - Q G Y S K E L T H Q T R R L L T K L F N K G I L K N - H T K Q G D Y - P N Y L L T R V F - R I N T P N K E I T N Q I I . . . . . 135910 GCAGCTGCTGGCCAAGAGTTGCAGGGTTGGTTTCTCCATTT A A A G Q E L Q G W F L H Q L L A K S C R V G F S I C S C W P R V A G L V S P F Maximal non-overlapping open reading frames (>= 64 codons): >C10HBa0115K16.1+_PGL-14_AGS-5_PPS_1 (135345 135614) (frame '0'; 267 bp, 89 residues) 1 QATIVPQLDK HRALLSCKLA NNLTKIRQHL PYFPYFVPIR QQSKLSTTIP ITHITQRIIL 61 NSPLPKTVPS RQLYQRSNDT PSDNSFYNS- PGL 15 (+ strand): 136839 137452 AGS-1 (136839 137452) SCR (e 0.897) Exon 1 136839 137452 ( 614 n); score: 0.897 PGS (136839 137452) SGN-E350708+ 3-phase translation of AGS-1 (+strand): . . . . . . 136839 GGGGATTTAGTGCTTCTATTCAATTCCAGATTGCGCTTGTTTCCAGGCAAACTCAAGTCC G D L V L L F N S R L R L F P G K L K S G I - C F Y S I P D C A C F Q A N S S P G F S A S I Q F Q I A L V S R Q T Q V . . . . . . 136899 AAATGGACTGGTCCTTACACTGTTACCCAACTATTCCCTCATGGAGCAGTTGATTTGGAA K W T G P Y T V T Q L F P H G A V D L E N G L V L T L L P N Y S L M E Q L I W K Q M D W S L H C Y P T I P S W S S - F G . . . . . . 136959 ACTAAGGAGGGTGTGCGGTTCAAGGTGAATGGACAGTGCATAAAAATCTATCTCGGGCAT T K E G V R F K V N G Q C I K I Y L G H L R R V C G S R - M D S A - K S I S G M N - G G C A V Q G E W T V H K N L S R A . . . . . . 137019 GCTGAATCGGCGAATGAAGTGATCGAGGCATACCATCTTCATGAAGTTTGAGTAATCAAG A E S A N E V I E A Y H L H E V - V I K L N R R M K - S R H T I F M K F E - S S C - I G E - S D R G I P S S - S L S N Q . . . . . . 137079 TGGCCCCAGTCGTGCGCGACATTAAATCAGGCGCTGGTTGGGAGGCAAACCAATACTTAT W P Q S C A T L N Q A L V G R Q T N T Y G P S R A R H - I R R W L G G K P I L I V A P V V R D I K S G A G W E A N Q Y L . . . . . . 137139 CGTCTTTTTAATAATGGTAGAATTCTTTCTATTAATGCGTTTTAAATTTGCAGGCACATC R L F N N G R I L S I N A F - I C R H I V F L I M V E F F L L M R F K F A G T S S S F - - W - N S F Y - C V L N L Q A H . . . . . . 137199 ACCAGGAAATTCTGTAGAAAACTACTCCGCAGTAGCCACTGACGGATACAACGACGGACC T R K F C R K L L R S S H - R I Q R R T P G N S V E N Y S A V A T D G Y N D G P H Q E I L - K T T P Q - P L T D T T T D . . . . . . 137259 GTTGTGCATGCAACGGACCGTCGTATGCATCCGTCACACCAGGTATGTATTTCTGTCATT V V H A T D R R M H P S H Q V C I S V I L C M Q R T V V C I R H T R Y V F L S F R C A C N G P S Y A S V T P G M Y F C H . . . . . . 137319 TTGAATATTAGGGCACACACGACGGAACCTACGACAGCTCATCACAAATGCGACAGACCG L N I R A H T T E P T T A H H K C D R P - I L G H T R R N L R Q L I T N A T D R F E Y - G T H D G T Y D S S S Q M R Q T . . . . . . 137379 TCGTCCGGGAACCGTCGCGTGATTAATGAATTCTACCCGACCCGACCCGGCTGGACCCTT S S G N R R V I N E F Y P T R P G W T L R P G T V A - L M N S T R P D P A G P F V V R E P S R D - - I L P D P T R L D P . . 137439 TTCAAAATATGACC F K I - S K Y D F Q N M T Maximal non-overlapping open reading frames (>= 64 codons): >C10HBa0115K16.1+_PGL-15_AGS-1_PPS_1 (136839 137069) (frame '1'; 228 bp, 76 residues) 1 GDLVLLFNSR LRLFPGKLKS KWTGPYTVTQ LFPHGAVDLE TKEGVRFKVN GQCIKIYLGH 61 AESANEVIEA YHLHEV- >C10HBa0115K16.1+_PGL-15_AGS-1_PPS_2 (137104 137322) (frame '2'; 216 bp, 72 residues) 1 IRRWLGGKPI LIVFLIMVEF FLLMRFKFAG TSPGNSVENY SAVATDGYND GPLCMQRTVV 61 CIRHTRYVFL SF- >C10HBa0115K16.1+_PGL-15_AGS-1_PPS_3 (137241 137450) (frame '1'; 207 bp, 69 residues) 1 RIQRRTVVHA TDRRMHPSHQ VCISVILNIR AHTTEPTTAH HKCDRPSSGN RRVINEFYPT 61 RPGWTLFKI- 3-phase translation of AGS-1 (-strand): . . . . . . 137452 GGTCATATTTTGAAAAGGGTCCAGCCGGGTCGGGTCGGGTAGAATTCATTAATCACGCGA G H I L K R V Q P G R V G - N S L I T R V I F - K G S S R V G S G R I H - S R D S Y F E K G P A G S G R V E F I N H A . . . . . . 137392 CGGTTCCCGGACGACGGTCTGTCGCATTTGTGATGAGCTGTCGTAGGTTCCGTCGTGTGT R F P D D G L S H L - - A V V G S V V C G S R T T V C R I C D E L S - V P S C V T V P G R R S V A F V M S C R R F R R V . . . . . . 137332 GCCCTAATATTCAAAATGACAGAAATACATACCTGGTGTGACGGATGCATACGACGGTCC A L I F K M T E I H T W C D G C I R R S P - Y S K - Q K Y I P G V T D A Y D G P C P N I Q N D R N T Y L V - R M H T T V . . . . . . 137272 GTTGCATGCACAACGGTCCGTCGTTGTATCCGTCAGTGGCTACTGCGGAGTAGTTTTCTA V A C T T V R R C I R Q W L L R S S F L L H A Q R S V V V S V S G Y C G V V F Y R C M H N G P S L Y P S V A T A E - F S . . . . . . 137212 CAGAATTTCCTGGTGATGTGCCTGCAAATTTAAAACGCATTAATAGAAAGAATTCTACCA Q N F L V M C L Q I - N A L I E R I L P R I S W - C A C K F K T H - - K E F Y H T E F P G D V P A N L K R I N R K N S T . . . . . . 137152 TTATTAAAAAGACGATAAGTATTGGTTTGCCTCCCAACCAGCGCCTGATTTAATGTCGCG L L K R R - V L V C L P T S A - F N V A Y - K D D K Y W F A S Q P A P D L M S R I I K K T I S I G L P P N Q R L I - C R . . . . . . 137092 CACGACTGGGGCCACTTGATTACTCAAACTTCATGAAGATGGTATGCCTCGATCACTTCA H D W G H L I T Q T S - R W Y A S I T S T T G A T - L L K L H E D G M P R S L H A R L G P L D Y S N F M K M V C L D H F . . . . . . 137032 TTCGCCGATTCAGCATGCCCGAGATAGATTTTTATGCACTGTCCATTCACCTTGAACCGC F A D S A C P R - I F M H C P F T L N R S P I Q H A R D R F L C T V H S P - T A I R R F S M P E I D F Y A L S I H L E P . . . . . . 136972 ACACCCTCCTTAGTTTCCAAATCAACTGCTCCATGAGGGAATAGTTGGGTAACAGTGTAA T P S L V S K S T A P - G N S W V T V - H P P - F P N Q L L H E G I V G - Q C K H T L L S F Q I N C S M R E - L G N S V . . . . . . 136912 GGACCAGTCCATTTGGACTTGAGTTTGCCTGGAAACAAGCGCAATCTGGAATTGAATAGA G P V H L D L S L P G N K R N L E L N R D Q S I W T - V C L E T S A I W N - I E R T S P F G L E F A W K Q A Q S G I E - . . 136852 AGCACTAAATCCCC S T K S A L N P K H - I P Maximal non-overlapping open reading frames (>= 64 codons): none PGL 16 (- strand): 138643 137863 AGS-1 (138643 138355,138254 137863) SCR (e 0.794 d 0.000 a 0.000,e 0.792) Exon 1 138643 138355 ( 289 n); score: 0.794 Intron 1 138354 138255 ( 100 n); Pd: 0.000 Pa: 0.000 Exon 2 138254 137863 ( 392 n); score: 0.792 PGS (138643 138355,138254 137863) SGN-E350443- 3-phase translation of AGS-1 (-strand): . . . . . . 138643 GGTGCCATAGTAGATAGTACCTGCAAAGGATTACTATTAGTACGAGTAGTGTCAAACAAA G A I V D S T C K G L L L V R V V S N K V P - - I V P A K D Y Y - Y E - C Q T K C H S R - Y L Q R I T I S T S S V K Q . . . . . . 138583 ACAGGCAAGCCCATACAACATAAAACATTTAAAATAGTGTGTTAGTGATAGTGAAACTGT T G K P I Q H K T F K I V C - - - - N C Q A S P Y N I K H L K - C V S D S E T V N R Q A H T T - N I - N S V L V I V K L . . . . . . 138523 ATCACACGAAAGGCTAGATGACGGCTCGTCGTGGATATGACAGACCGTCATGAGGTCCGT I T R K A R - R L V V D M T D R H E V R S H E R L D D G S S W I - Q T V M R S V Y H T K G - M T A R R G Y D R P S - G P . . . . . . 138463 CGTGTTGTACTTAGCCTATGTATATAGAAAGAACCCTGAAGGAGGGGTCTCTGACCATCA R V V L S L C I - K E P - R R G L - P S V L Y L A Y V Y R K N P E G G V S D H H S C C T - P M Y I E R T L K E G S L T I . . . . . : . 138403 TGACGGTCAAGCAGGACGGACCGTCATTGGTATGACGGTCCGTCGTAGG : AGTCCGTCGTA - R S S R T D R H W Y D G P S - : E S V V D G Q A G R T V I G M T V R R R : S P S - M T V K Q D G P S L V - R S V V G : V R R . . . . . . 138243 GGACACTTAGAAAATGTTGGGATACCCTTATCAGAGAAGTCTCTGACCATCATGATGGTC G H L E N V G I P L S E K S L T I M M V D T - K M L G Y P Y Q R S L - P S - W S R T L R K C W D T L I R E V S D H H D G . . . . . . 138183 AAGCAGGACGGACCATCGTTGGTACGACGGTCCGTCGTAAGAGTCCGTCGTAGGACAATT K Q D G P S L V R R S V V R V R R R T I S R T D H R W Y D G P S - E S V V G Q L Q A G R T I V G T T V R R K S P S - D N . . . . . . 138123 AGAAAATGTTAGGAGACCCTTAGAAACAGGGTCTCTGAAAACCAGAATGGTTGTGCAGAA R K C - E T L R N R V S E N Q N G C A E E N V R R P L E T G S L K T R M V V Q N - K M L G D P - K Q G L - K P E W L C R . . . . . . 138063 TGGACCGTCGTGAAGACAACGGTCCGTCACAGGCGTCGTTGGGCAGGGGTTCTAGGGCTT W T V V K T T V R H R R R W A G V L G L G P S - R Q R S V T G V V G Q G F - G L M D R R E D N G P S Q A S L G R G S R A . . . . . . 138003 GTGCAATGGACCCTACGACGGTCCGTCGTGTGTGCGACGGTCCGTCATCGGGGTCTCGTT V Q W T L R R S V V C A T V R H R G L V C N G P Y D G P S C V R R S V I G V S F C A M D P T T V R R V C D G P S S G S R . . . . . . 137943 CTGAGTAGTAGTGTTAGAACTGGGGGTACCCTACGCATCCCCGATGAACCCACATGGTCT L S S S V R T G G T L R I P D E P T W S - V V V L E L G V P Y A S P M N P H G L S E - - C - N W G Y P T H P R - T H M V . . . 137883 TGTAGTGTTGTGGACCTATAT C S V V D L Y V V L W T Y L - C C G P I Maximal non-overlapping open reading frames (>= 64 codons): >C10HBa0115K16.1-_PGL-16_AGS-1_PPS_1 (138111 137863) (frame '1'; 249 bp, 83 residues) 1 ETLRNRVSEN QNGCAEWTVV KTTVRHRRRW AGVLGLVQWT LRRSVVCATV RHRGLVLSSS 61 VRTGGTLRIP DEPTWSCSVV DLY PGL 17 (+ strand): 140442 141024 AGS-1 (140442 140990) SCR (e 0.923) Exon 1 140442 140990 ( 549 n); score: 0.923 PGS (140442 140990) SGN-E243970+ 3-phase translation of AGS-1 (+strand): . . . . . . 140442 CCCCTCGAGAGAGTTCCAAGAGGCGTAGGGGTCGATCAGAGAATGAGGCGTGAGCAAGGA P L E R V P R G V G V D Q R M R R E Q G P S R E F Q E A - G S I R E - G V S K E P R E S S K R R R G R S E N E A - A R . . . . . . 140502 AGAAGGAGCGCCGAGAGTGGAGGCCGCGAGGAGAGCCTCACTTGATGAGGCGGAGGCACA R R S A E S G G R E E S L T - - G G G T E G A P R V E A A R R A S L D E A E A H K K E R R E W R P R G E P H L M R R R H . . . . . . 140562 CCAAATCAGATCATCGCAGATAGCGGCTGGGGCGTCTAGCTCCCGCACTGTAGAGACAGC P N Q I I A D S G W G V - L P H C R D S Q I R S S Q I A A G A S S S R T V E T A T K S D H R R - R L G R L A P A L - R Q . . . . . . 140622 ACGAGGAACTACTGATTGTGCGGTTGTTGCTGAGGACATCACTGAGGGTGTCCAGATTGC T R N Y - L C G C C - G H H - G C P D C R G T T D C A V V A E D I T E G V Q I A H E E L L I V R L L L R T S L R V S R L . . . . . . 140682 TGAGGACACCACTGAGGGTGTCCAGATTGTAGAGGATGTGGGTTCTGGGAAACCGGACCC - G H H - G C P D C R G C G F W E T G P E D T T E G V Q I V E D V G S G K P D P L R T P L R V S R L - R M W V L G N R T . . . . . . 140742 ACCAGCTTGCTGATCGACGACGCTATGCGCCACAGGTTTGCTTCACCTACCCCTCTAATC T S L L I D D A M R H R F A S P T P L I P A C - S T T L C A T G L L H L P L - S H Q L A D R R R Y A P Q V C F T Y P S N . . . . . . 140802 TTTAGATTTTTTATGCATTGGGGACAATTGCATGCTTCTTTGTTGGGGGTGGGGTAAATG F R F F M H W G Q L H A S L L G V G - M L D F L C I G D N C M L L C W G W G K W L - I F Y A L G T I A C F F V G G G V N . . . . . . 140862 GAAAGTGAGTGTTAGGGTGAAGTCTGAGTAGCCCAACTCACTATCCTCTTTTGGGGGTTT E S E C - G E V - V A Q L T I L F W G F K V S V R V K S E - P N S L S S F G G F G K - V L G - S L S S P T H Y P L L G V . . . . . . 140922 TCTTGCCTGTGTTCTTTTTCCCCAAAAGACTGATTACTTTTTCTGTTGAACCGGCACGTT S C L C S F S P K D - L L F L L N R H V L A C V L F P Q K T D Y F F C - T G T F F L P V F F F P K R L I T F S V E P A R . 140982 TTATCTTTT L S F Y L F I F Maximal non-overlapping open reading frames (>= 64 codons): >C10HBa0115K16.1+_PGL-17_AGS-1_PPS_1 (140488 140754) (frame '2'; 264 bp, 88 residues) 1 GVSKEEGAPR VEAARRASLD EAEAHQIRSS QIAAGASSSR TVETARGTTD CAVVAEDITE 61 GVQIAEDTTE GVQIVEDVGS GKPDPPAC- 3-phase translation of AGS-1 (-strand): . . . . . . 140990 AAAAGATAAAACGTGCCGGTTCAACAGAAAAAGTAATCAGTCTTTTGGGGAAAAAGAACA K R - N V P V Q Q K K - S V F W G K R T K D K T C R F N R K S N Q S F G E K E H K I K R A G S T E K V I S L L G K K N . . . . . . 140930 CAGGCAAGAAAACCCCCAAAAGAGGATAGTGAGTTGGGCTACTCAGACTTCACCCTAACA Q A R K P P K E D S E L G Y S D F T L T R Q E N P Q K R I V S W A T Q T S P - H T G K K T P K R G - - V G L L R L H P N . . . . . . 140870 CTCACTTTCCATTTACCCCACCCCCAACAAAGAAGCATGCAATTGTCCCCAATGCATAAA L T F H L P H P Q Q R S M Q L S P M H K S L S I Y P T P N K E A C N C P Q C I K T H F P F T P P P T K K H A I V P N A - . . . . . . 140810 AAATCTAAAGATTAGAGGGGTAGGTGAAGCAAACCTGTGGCGCATAGCGTCGTCGATCAG K S K D - R G R - S K P V A H S V V D Q N L K I R G V G E A N L W R I A S S I S K I - R L E G - V K Q T C G A - R R R S . . . . . . 140750 CAAGCTGGTGGGTCCGGTTTCCCAGAACCCACATCCTCTACAATCTGGACACCCTCAGTG Q A G G S G F P E P T S S T I W T P S V K L V G P V S Q N P H P L Q S G H P Q W A S W W V R F P R T H I L Y N L D T L S . . . . . . 140690 GTGTCCTCAGCAATCTGGACACCCTCAGTGATGTCCTCAGCAACAACCGCACAATCAGTA V S S A I W T P S V M S S A T T A Q S V C P Q Q S G H P Q - C P Q Q Q P H N Q - G V L S N L D T L S D V L S N N R T I S . . . . . . 140630 GTTCCTCGTGCTGTCTCTACAGTGCGGGAGCTAGACGCCCCAGCCGCTATCTGCGATGAT V P R A V S T V R E L D A P A A I C D D F L V L S L Q C G S - T P Q P L S A M I S S S C C L Y S A G A R R P S R Y L R - . . . . . . 140570 CTGATTTGGTGTGCCTCCGCCTCATCAAGTGAGGCTCTCCTCGCGGCCTCCACTCTCGGC L I W C A S A S S S E A L L A A S T L G - F G V P P P H Q V R L S S R P P L S A S D L V C L R L I K - G S P R G L H S R . . . . . . 140510 GCTCCTTCTTCCTTGCTCACGCCTCATTCTCTGATCGACCCCTACGCCTCTTGGAACTCT A P S S L L T P H S L I D P Y A S W N S L L L P C S R L I L - S T P T P L G T L R S F F L A H A S F S D R P L R L L E L . 140450 CTCGAGGGG L E G S R S R G Maximal non-overlapping open reading frames (>= 64 codons): >C10HBa0115K16.1-_PGL-17_AGS-1_PPS_1 (140783 140442) (frame '1'; 342 bp, 114 residues) 1 SKPVAHSVVD QQAGGSGFPE PTSSTIWTPS VVSSAIWTPS VMSSATTAQS VVPRAVSTVR 61 ELDAPAAICD DLIWCASASS SEALLAASTL GAPSSLLTPH SLIDPYASWN SLEG AGS-2 (140462 140526,140681 141024) SCR (e 0.762 d 0.000 a 0.000,e 0.844) Exon 1 140462 140526 ( 65 n); score: 0.762 Intron 1 140527 140680 ( 154 n); Pd: 0.000 Pa: 0.000 Exon 2 140681 141024 ( 344 n); score: 0.844 PGS (140462 140526,140681 141024) SGN-E577987- 3-phase translation of AGS-2 (+strand): . . . . . . 140462 AGGCGTAGGGGTCGATCAGAGAATGAGGCGTGAGCAAGGAAGAAGGAGCGCCGAGAGTGG R R R G R S E N E A - A R K K E R R E W G V G V D Q R M R R E Q G R R S A E S G A - G S I R E - G V S K E E G A P R V . : . . . . . 140522 AGGCC : CTGAGGACACCACTGAGGGTGTCCAGATTGTAGAGGATGTGGGTTCTGGGAAACC R P : - G H H - G C P D C R G C G F W E T G : P E D T T E G V Q I V E D V G S G K P E A : L R T P L R V S R L - R M W V L G N . . . . . . 140736 GGACCCACCAGCTTGCTGATCGACGACGCTATGCGCCACAGGTTTGCTTCACCTACCCCT G P T S L L I D D A M R H R F A S P T P D P P A C - S T T L C A T G L L H L P L R T H Q L A D R R R Y A P Q V C F T Y P . . . . . . 140796 CTAATCTTTAGATTTTTTATGCATTGGGGACAATTGCATGCTTCTTTGTTGGGGGTGGGG L I F R F F M H W G Q L H A S L L G V G - S L D F L C I G D N C M L L C W G W G S N L - I F Y A L G T I A C F F V G G G . . . . . . 140856 TAAATGGAAAGTGAGTGTTAGGGTGAAGTCTGAGTAGCCCAACTCACTATCCTCTTTTGG - M E S E C - G E V - V A Q L T I L F W K W K V S V R V K S E - P N S L S S F G V N G K - V L G - S L S S P T H Y P L L . . . . . . 140916 GGGTTTTCTTGCCTGTGTTCTTTTTCCCCAAAAGACTGATTACTTTTTCTGTTGAACCGG G F S C L C S F S P K D - L L F L L N R G F L A C V L F P Q K T D Y F F C - T G G V F L P V F F F P K R L I T F S V E P . . . . . 140976 CACGTTTTATCTTTTGTACATAGTTTAACTCTGAAGCATGATGGATAAA H V L S F V H S L T L K H D G - T F Y L L Y I V - L - S M M D K A R F I F C T - F N S E A - W I Maximal non-overlapping open reading frames (>= 64 codons): none PGL 18 (+ strand): 141444 143803 AGS-1 (141444 141964) SCR (e 0.712) Exon 1 141444 141964 ( 521 n); score: 0.712 PGS (141444 141964) SGN-E244201- 3-phase translation of AGS-1 (+strand): . . . . . . 141444 TTGGACATGTGCACCTCAGCTTATGCCAAAAGCATAAGTTGAGGGTGGCTACTGTATAAA L D M C T S A Y A K S I S - G W L L Y K W T C A P Q L M P K A - V E G G Y C I N G H V H L S L C Q K H K L R V A T V - . . . . . . 141504 CAACCTTCGTTATGGCCCTGAACCGACTTTGGGTATTATGTACCTTGATTCATGGCAAAG Q P S L W P - T D F G Y Y V P - F M A K N L R Y G P E P T L G I M Y L D S W Q S T T F V M A L N R L W V L C T L I H G K . . . . . . 141564 CCATGAGTTGAGGGTGGCTGTTTTGAGGAATGCTCTGGAAAGTGGGGTTGAAAGAACAAA P - V E G G C F E E C S G K W G - K N K H E L R V A V L R N A L E S G V E R T K A M S - G W L F - G M L W K V G L K E Q . . . . . . 141624 GAGAGAGAAAGAACAAAAGTAAAGTGACTCAAGAACTCGTTGAAAGAAAAGGAAAGAAAA E R E R T K V K - L K N S L K E K E R K R E K E Q K - S D S R T R - K K R K E K R E R K N K S K V T Q E L V E R K G K K . . . . . . 141684 AGAGAAATATTCAAGAATTACAAACAAGAAAAGAAAAGAGTTACTTACACAAATGAAGAA R E I F K N Y K Q E K K R V T Y T N E E E K Y S R I T N K K R K E L L T Q M K K K R N I Q E L Q T R K E K S Y L H K - R . . . . . . 141744 AGAAGGGAAACAGCAAGGTGAAAGAATAAGAGAAACTGGGCGAGATAAAGTGATAGAAAG R R E T A R - K N K R N W A R - S D R K E G K Q Q G E R I R E T G R D K V I E S K K G N S K V K E - E K L G E I K - - K . . . . . . 141804 TGGAAGGTTTAGCCGATATGTCAAGGAGGGCAAAAAGTCACTAAAGTATACCTAAATATA W K V - P I C Q G G Q K V T K V Y L N I G R F S R Y V K E G K K S L K Y T - I Y V E G L A D M S R R A K S H - S I P K Y . . . . . . 141864 CCCTACCTGACTCTGAGCCTACGTTACAAGCTAAAAAAGTCCTATCGCGATCCTAAGGGT P Y L T L S L R Y K L K K S Y R D P K G P T - L - A Y V T S - K S P I A I L R V T L P D S E P T L Q A K K V L S R S - G . . . . . 141924 TGTATAGCGAACTTAAGGCAGTGAAAATAAGGGCAAGCTTA C I A N L R Q - K - G Q A V - R T - G S E N K G K L L Y S E L K A V K I R A S L Maximal non-overlapping open reading frames (>= 64 codons): none 3-phase translation of AGS-1 (-strand): . . . . . . 141964 TAAGCTTGCCCTTATTTTCACTGCCTTAAGTTCGCTATACAACCCTTAGGATCGCGATAG - A C P Y F H C L K F A I Q P L G S R - K L A L I F T A L S S L Y N P - D R D R S L P L F S L P - V R Y T T L R I A I . . . . . . 141904 GACTTTTTTAGCTTGTAACGTAGGCTCAGAGTCAGGTAGGGTATATTTAGGTATACTTTA D F F S L - R R L R V R - G I F R Y T L T F L A C N V G S E S G R V Y L G I L - G L F - L V T - A Q S Q V G Y I - V Y F . . . . . . 141844 GTGACTTTTTGCCCTCCTTGACATATCGGCTAAACCTTCCACTTTCTATCACTTTATCTC V T F C P P - H I G - T F H F L S L Y L - L F A L L D I S A K P S T F Y H F I S S D F L P S L T Y R L N L P L S I T L S . . . . . . 141784 GCCCAGTTTCTCTTATTCTTTCACCTTGCTGTTTCCCTTCTTTCTTCATTTGTGTAAGTA A Q F L L F F H L A V S L L S S F V - V P S F S Y S F T L L F P F F L H L C K - R P V S L I L S P C C F P S F F I C V S . . . . . . 141724 ACTCTTTTCTTTTCTTGTTTGTAATTCTTGAATATTTCTCTTTTTCTTTCCTTTTCTTTC T L F F S C L - F L N I S L F L S F S F L F S F L V C N S - I F L F F F P F L S N S F L F L F V I L E Y F S F S F L F F . . . . . . 141664 AACGAGTTCTTGAGTCACTTTACTTTTGTTCTTTCTCTCTCTTTGTTCTTTCAACCCCAC N E F L S H F T F V L S L S L F F Q P H T S S - V T L L L F F L S L C S F N P T Q R V L E S L Y F C S F S L F V L S T P . . . . . . 141604 TTTCCAGAGCATTCCTCAAAACAGCCACCCTCAACTCATGGCTTTGCCATGAATCAAGGT F P E H S S K Q P P S T H G F A M N Q G F Q S I P Q N S H P Q L M A L P - I K V L S R A F L K T A T L N S W L C H E S R . . . . . . 141544 ACATAATACCCAAAGTCGGTTCAGGGCCATAACGAAGGTTGTTTATACAGTAGCCACCCT T - Y P K S V Q G H N E G C L Y S S H P H N T Q S R F R A I T K V V Y T V A T L Y I I P K V G S G P - R R L F I Q - P P . . . . . 141484 CAACTTATGCTTTTGGCATAAGCTGAGGTGCACATGTCCAA Q L M L L A - A E V H M S N L C F W H K L R C T C P S T Y A F G I S - G A H V Q Maximal non-overlapping open reading frames (>= 64 codons): >C10HBa0115K16.1-_PGL-18_AGS-1_PPS_1 (141854 141513) (frame '0'; 339 bp, 113 residues) 1 VYFSDFLPSL TYRLNLPLSI TLSRPVSLIL SPCCFPSFFI CVSNSFLFLF VILEYFSFSF 61 LFFQRVLESL YFCSFSLFVL STPLSRAFLK TATLNSWLCH ESRYIIPKVG SGP- AGS-2 (142017 143803) SCR (e 0.917) Exon 1 142017 143803 (1787 n); score: 0.917 PGS (142017 142731) SGN-E578039- PGS (142179 142842) SGN-E352282- PGS (142316 142723) SGN-E577891- PGS (142336 142890) SGN-E346859+ PGS (142343 142864) SGN-E540293- PGS (142343 142864) SGN-E286708- PGS (142362 142842) SGN-E243969- PGS (142451 143065) SGN-E369291+ PGS (142451 143062) SGN-E369290- PGS (142451 143007) SGN-E261921+ PGS (142451 142992) SGN-E546025- PGS (142451 142919) SGN-E322644+ PGS (142451 142889) SGN-E243137+ PGS (142451 142852) SGN-E258752+ PGS (142451 142818) SGN-E255290+ PGS (142451 142759) SGN-E258181+ PGS (142451 142637) SGN-E546067+ PGS (142533 143035) SGN-E349968+ PGS (142717 143275) SGN-E550629- PGS (142717 143275) SGN-E550645- PGS (142971 143274) SGN-E273427- PGS (143118 143803) SGN-E241731- 3-phase translation of AGS-2 (+strand): . . . . . . 142017 GTAATCCTTATACTCAAACTGAAATCATTGTATGAAAAATGAGGATTTTGTTCTAAAGTG V I L I L K L K S L Y E K - G F C S K V - S L Y S N - N H C M K N E D F V L K - N P Y T Q T E I I V - K M R I L F - S . . . . . . 142077 AGGACACTAGTTGCAATACCGGAATTGTTAGCACCTCGGTGAGAAATTGAAGTGGATAGG R T L V A I P E L L A P R - E I E V D R G H - L Q Y R N C - H L G E K L K W I G E D T S C N T G I V S T S V R N - S G - . . . . . . 142137 TGTTAGTGCATGGTGAGTCTGTGTCATGTTCGAATCCCACAAAATTCAAGCCTAATAGTG C - C M V S L C H V R I P Q N S S L I V V S A W - V C V M F E S H K I Q A - - - V L V H G E S V S C S N P T K F K P N S . . . . . . 142197 ATAGCATGCATTGATTTGATGAGATTAATCGGGATTGATAGCCAAATGATTGCAAAGGAT I A C I D L M R L I G I D S Q M I A K D - H A L I - - D - S G L I A K - L Q R I D S M H - F D E I N R D - - P N D C K G . . . . . . 142257 AAAACATGAATACTATTGTACAAAGATTGTGTAGTGAGTCATAGTGCGTCGCTTGAGGAC K T - I L L Y K D C V V S H S A S L E D K H E Y Y C T K I V - - V I V R R L R T - N M N T I V Q R L C S E S - C V A - G . . . . . . 142317 AAACAACGAATTTAAGTTGAGGGTGTTGATATACCGTGATTTCACGGCATAATTAATACT K Q R I - V E G V D I P - F H G I I N T N N E F K L R V L I Y R D F T A - L I L Q T T N L S - G C - Y T V I S R H N - Y . . . . . . 142377 TTTTCCTTAAGTTTAGTGTGTCCGAAAGCCTTTTTTGTGCTAATTTTGATATAAGTTTCT F S L S L V C P K A F F V L I L I - V S F P - V - C V R K P F L C - F - Y K F L F F L K F S V S E S L F C A N F D I S F . . . . . . 142437 CTTTGTTTTGCAGGAATCTGTCCAAAGATGAATGCGGAGATTTTGAGCAAAAAATGCAGA L C F A G I C P K M N A E I L S K K C R F V L Q E S V Q R - M R R F - A K N A E S L F C R N L S K D E C G D F E Q K M Q . . . . . . 142497 AGAGACCACCCTACGGAGCTTATGACGGTCCGCCGTGCCTCTGACGGTCCGTAGGTGGCA R D H P T E L M T V R R A S D G P - V A E T T L R S L - R S A V P L T V R R W Q K R P P Y G A Y D G P P C L - R S V G G . . . . . . 142557 GCGTAGAGAAGTTGCTGAAGGAAGATGGGGAAGTCTGACCAAGTGTGGGATTACGAAGCT A - R S C - R K M G K S D Q V W D Y E A R R E V A E G R W G S L T K C G I T K L S V E K L L K E D G E V - P S V G L R S . . . . . . 142617 TGTGACGGTCCGTCATGGCTATGACGGTCCGTCCTACAGGTTCGTCGTGAAGATCAGAGA C D G P S W L - R S V L Q V R R E D Q R V T V R H G Y D G P S Y R F V V K I R E L - R S V M A M T V R P T G S S - R S E . . . . . . 142677 AGTGATCCCAGTACTCAGATTCCAAGAGTTGTAGTATTTTGAAACGAGACCCTCGATGGA S D P S T Q I P R V V V F - N E T L D G V I P V L R F Q E L - Y F E T R P S M D K - S Q Y S D S K S C S I L K R D P R W . . . . . . 142737 CCGTTGTGCCTATGACGGTCCGTCACACTTGCCGTCGAGGGGAATGAAGAAAGCAGCAGA P L C L - R S V T L A V E G N E E S S R R C A Y D G P S H L P S R G M K K A A E T V V P M T V R H T C R R G E - R K Q Q . . . . . . 142797 AGAAATTGCACCAAGTATGGGACGACGGAGTCCACGACGATCCGTCATGACCACGACGGT R N C T K Y G T T E S T T I R H D H D G E I A P S M G R R S P R R S V M T T T V K K L H Q V W D D G V H D D P S - P R R . . . . . . 142857 CCGTCGCGTGGTCCGTCGACCCAGCCGCATTTTGGCAGATTTCTAGTAATTAGAATCCTT P S R G P S T Q P H F G R F L V I R I L R R V V R R P S R I L A D F - - L E S F S V A W S V D P A A F W Q I S S N - N P . . . . . . 142917 CTTTAATTAAGTTTTTATTTTTTTATAAATAGTTCGAAAAACCTCGTTTTTGAGGTTAGA L - L S F Y F F I N S S K N L V F E V R F N - V F I F L - I V R K T S F L R L D S L I K F L F F Y K - F E K P R F - G - . . . . . . 142977 CTCTGGGAGATTAGACATCATATTATTAGACTTTGTTTATTAGTGTTTGATTTTTTGGAG L W E I R H H I I R L C L L V F D F L E S G R L D I I L L D F V Y - C L I F W R T L G D - T S Y Y - T L F I S V - F F G . . . . . . 143037 ATTCTTACAAGTAATTTTTGGTGATTAATCAAGCAATTTTTCGGACTTTACTCTTTCTCA I L T S N F W - L I K Q F F G L Y S F S F L Q V I F G D - S S N F S D F T L S H D S Y K - F L V I N Q A I F R T L L F L . . . . . . 143097 TTGAAGTAAGTACATGAATTCTTATTTAATATATTTGAATATTGTGTTTATGGCTATGAG L K - V H E F L F N I F E Y C V Y G Y E - S K Y M N S Y L I Y L N I V F M A M R I E V S T - I L I - Y I - I L C L W L - . . . . . . 143157 GAACTAAACTCCATAACTAGGGTTGTGGGAACCATAGGCAAATAATGAGATAAACCCTAG E L N S I T R V V G T I G K - - D K P - N - T P - L G L W E P - A N N E I N P S G T K L H N - G C G N H R Q I M R - T L . . . . . . 143217 CTAAAAGAACAATTCTAGAATAGTGTCTTGCATGTATTAATAATTCTTTCACTTAGAAGT L K E Q F - N S V L H V L I I L S L R S - K N N S R I V S C M Y - - F F H L E V A K R T I L E - C L A C I N N S F T - K . . . . . . 143277 CTTTTTAACGGATGATCAACGTTAGAACTCGCCTTAATGCTACTTGCCAGACCAAGGTGG L F N G - S T L E L A L M L L A R P R W F L T D D Q R - N S P - C Y L P D Q G G S F - R M I N V R T R L N A T C Q T K V . . . . . . 143337 TAGATAATAGGAAACGAAGTATTAACATAGATTTAGTGTATACTATCTAATAGGCTAGTA - I I G N E V L T - I - C I L S N R L V R - - E T K Y - H R F S V Y Y L I G - Y V D N R K R S I N I D L V Y T I - - A S . . . . . . 143397 TTGATTGGTACGAGGTAATAACTTAGTCAAATATCGAATACGATGCTTAATATGAGGTAA L I G T R - - L S Q I S N T M L N M R - - L V R G N N L V K Y R I R C L I - G K I D W Y E V I T - S N I E Y D A - Y E V . . . . . . 143457 AGATAAGGGTTAGGAAAGCAACACACGTAGCCGGACCAAGGTGCGGAGTGAGATTTTCTA R - G L G K Q H T - P D Q G A E - D F L D K G - E S N T R S R T K V R S E I F - K I R V R K A T H V A G P R C G V R F S . . . . . . 143517 GATGCCGGACCAAGGATTTAGAAATACATAACTTATCACTTTGCATGCAAGATACTAGGA D A G P R I - K Y I T Y H F A C K I L G M P D Q G F R N T - L I T L H A R Y - E R C R T K D L E I H N L S L C M Q D T R . . . . . . 143577 AAGAATTGTTATAGTTAGAATTATCAAGTTATGAACCTGCGGGGAACACGTAAACCCTAG K N C Y S - N Y Q V M N L R G T R K P - R I V I V R I I K L - T C G E H V N P S K E L L - L E L S S Y E P A G N T - T L . . . . . . 143637 TTACTTTGATTAATTGATTAAAACCCAACATTAAAAGCTGTTAAGTGTCTCTTTCAAGTC L L - L I D - N P T L K A V K C L F Q V Y F D - L I K T Q H - K L L S V S F K S V T L I N - L K P N I K S C - V S L S S . . . . . . 143697 CGTTAGTTATTTTTACTCATTAGGAAATACAAACCCCCTTTTTATGCTTTTACTTTCTAA R - L F L L I R K Y K P P F Y A F T F - V S Y F Y S L G N T N P L F M L L L S K P L V I F T H - E I Q T P F L C F Y F L . . . . . 143757 GGAAGTCATCAACCGAACAATAGTAATAACAAGTTGAAGTTAAGTCT G S H Q P N N S N N K L K L S E V I N R T I V I T S - S - V R K S S T E Q - - - Q V E V K S Maximal non-overlapping open reading frames (>= 64 codons): none 3-phase translation of AGS-2 (-strand): . . . . . . 143803 AGACTTAACTTCAACTTGTTATTACTATTGTTCGGTTGATGACTTCCTTAGAAAGTAAAA R L N F N L L L L L F G - - L P - K V K D L T S T C Y Y Y C S V D D F L R K - K T - L Q L V I T I V R L M T S L E S K . . . . . . 143743 GCATAAAAAGGGGGTTTGTATTTCCTAATGAGTAAAAATAACTAACGGACTTGAAAGAGA A - K G G L Y F L M S K N N - R T - K R H K K G V C I S - - V K I T N G L E R D S I K R G F V F P N E - K - L T D L K E . . . . . . 143683 CACTTAACAGCTTTTAATGTTGGGTTTTAATCAATTAATCAAAGTAACTAGGGTTTACGT H L T A F N V G F - S I N Q S N - G L R T - Q L L M L G F N Q L I K V T R V Y V T L N S F - C W V L I N - S K - L G F T . . . . . . 143623 GTTCCCCGCAGGTTCATAACTTGATAATTCTAACTATAACAATTCTTTCCTAGTATCTTG V P R R F I T - - F - L - Q F F P S I L F P A G S - L D N S N Y N N S F L V S C C S P Q V H N L I I L T I T I L S - Y L . . . . . . 143563 CATGCAAAGTGATAAGTTATGTATTTCTAAATCCTTGGTCCGGCATCTAGAAAATCTCAC H A K - - V M Y F - I L G P A S R K S H M Q S D K L C I S K S L V R H L E N L T A C K V I S Y V F L N P W S G I - K I S . . . . . . 143503 TCCGCACCTTGGTCCGGCTACGTGTGTTGCTTTCCTAACCCTTATCTTTACCTCATATTA S A P W S G Y V C C F P N P Y L Y L I L P H L G P A T C V A F L T L I F T S Y - L R T L V R L R V L L S - P L S L P H I . . . . . . 143443 AGCATCGTATTCGATATTTGACTAAGTTATTACCTCGTACCAATCAATACTAGCCTATTA S I V F D I - L S Y Y L V P I N T S L L A S Y S I F D - V I T S Y Q S I L A Y - K H R I R Y L T K L L P R T N Q Y - P I . . . . . . 143383 GATAGTATACACTAAATCTATGTTAATACTTCGTTTCCTATTATCTACCACCTTGGTCTG D S I H - I Y V N T S F P I I Y H L G L I V Y T K S M L I L R F L L S T T L V W R - Y T L N L C - Y F V S Y Y L P P W S . . . . . . 143323 GCAAGTAGCATTAAGGCGAGTTCTAACGTTGATCATCCGTTAAAAAGACTTCTAAGTGAA A S S I K A S S N V D H P L K R L L S E Q V A L R R V L T L I I R - K D F - V K G K - H - G E F - R - S S V K K T S K - . . . . . . 143263 AGAATTATTAATACATGCAAGACACTATTCTAGAATTGTTCTTTTAGCTAGGGTTTATCT R I I N T C K T L F - N C S F S - G L S E L L I H A R H Y S R I V L L A R V Y L K N Y - Y M Q D T I L E L F F - L G F I . . . . . . 143203 CATTATTTGCCTATGGTTCCCACAACCCTAGTTATGGAGTTTAGTTCCTCATAGCCATAA H Y L P M V P T T L V M E F S S S - P - I I C L W F P Q P - L W S L V P H S H K S L F A Y G S H N P S Y G V - F L I A I . . . . . . 143143 ACACAATATTCAAATATATTAAATAAGAATTCATGTACTTACTTCAATGAGAAAGAGTAA T Q Y S N I L N K N S C T Y F N E K E - H N I Q I Y - I R I H V L T S M R K S K N T I F K Y I K - E F M Y L L Q - E R V . . . . . . 143083 AGTCCGAAAAATTGCTTGATTAATCACCAAAAATTACTTGTAAGAATCTCCAAAAAATCA S P K N C L I N H Q K L L V R I S K K S V R K I A - L I T K N Y L - E S P K N Q K S E K L L D - S P K I T C K N L Q K I . . . . . . 143023 AACACTAATAAACAAAGTCTAATAATATGATGTCTAATCTCCCAGAGTCTAACCTCAAAA N T N K Q S L I I - C L I S Q S L T S K T L I N K V - - Y D V - S P R V - P Q K K H - - T K S N N M M S N L P E S N L K . . . . . . 142963 ACGAGGTTTTTCGAACTATTTATAAAAAAATAAAAACTTAATTAAAGAAGGATTCTAATT T R F F E L F I K K - K L N - R R I L I R G F S N Y L - K N K N L I K E G F - L N E V F R T I Y K K I K T - L K K D S N . . . . . . 142903 ACTAGAAATCTGCCAAAATGCGGCTGGGTCGACGGACCACGCGACGGACCGTCGTGGTCA T R N L P K C G W V D G P R D G P S W S L E I C Q N A A G S T D H A T D R R G H Y - K S A K M R L G R R T T R R T V V V . . . . . . 142843 TGACGGATCGTCGTGGACTCCGTCGTCCCATACTTGGTGCAATTTCTTCTGCTGCTTTCT - R I V V D S V V P Y L V Q F L L L L S D G S S W T P S S H T W C N F F C C F L M T D R R G L R R P I L G A I S S A A F . . . . . . 142783 TCATTCCCCTCGACGGCAAGTGTGACGGACCGTCATAGGCACAACGGTCCATCGAGGGTC S F P S T A S V T D R H R H N G P S R V H S P R R Q V - R T V I G T T V H R G S F I P L D G K C D G P S - A Q R S I E G . . . . . . 142723 TCGTTTCAAAATACTACAACTCTTGGAATCTGAGTACTGGGATCACTTCTCTGATCTTCA S F Q N T T T L G I - V L G S L L - S S R F K I L Q L L E S E Y W D H F S D L H L V S K Y Y N S W N L S T G I T S L I F . . . . . . 142663 CGACGAACCTGTAGGACGGACCGTCATAGCCATGACGGACCGTCACAAGCTTCGTAATCC R R T C R T D R H S H D G P S Q A S - S D E P V G R T V I A M T D R H K L R N P T T N L - D G P S - P - R T V T S F V I . . . . . . 142603 CACACTTGGTCAGACTTCCCCATCTTCCTTCAGCAACTTCTCTACGCTGCCACCTACGGA H T W S D F P I F L Q Q L L Y A A T Y G T L G Q T S P S S F S N F S T L P P T D P H L V R L P H L P S A T S L R C H L R . . . . . . 142543 CCGTCAGAGGCACGGCGGACCGTCATAAGCTCCGTAGGGTGGTCTCTTCTGCATTTTTTG P S E A R R T V I S S V G W S L L H F L R Q R H G G P S - A P - G G L F C I F C T V R G T A D R H K L R R V V S S A F F . . . . . . 142483 CTCAAAATCTCCGCATTCATCTTTGGACAGATTCCTGCAAAACAAAGAGAAACTTATATC L K I S A F I F G Q I P A K Q R E T Y I S K S P H S S L D R F L Q N K E K L I S A Q N L R I H L W T D S C K T K R N L Y . . . . . . 142423 AAAATTAGCACAAAAAAGGCTTTCGGACACACTAAACTTAAGGAAAAAGTATTAATTATG K I S T K K A F G H T K L K E K V L I M K L A Q K R L S D T L N L R K K Y - L C Q N - H K K G F R T H - T - G K S I N Y . . . . . . 142363 CCGTGAAATCACGGTATATCAACACCCTCAACTTAAATTCGTTGTTTGTCCTCAAGCGAC P - N H G I S T P S T - I R C L S S S D R E I T V Y Q H P Q L K F V V C P Q A T A V K S R Y I N T L N L N S L F V L K R . . . . . . 142303 GCACTATGACTCACTACACAATCTTTGTACAATAGTATTCATGTTTTATCCTTTGCAATC A L - L T T Q S L Y N S I H V L S F A I H Y D S L H N L C T I V F M F Y P L Q S R T M T H Y T I F V Q - Y S C F I L C N . . . . . . 142243 ATTTGGCTATCAATCCCGATTAATCTCATCAAATCAATGCATGCTATCACTATTAGGCTT I W L S I P I N L I K S M H A I T I R L F G Y Q S R L I S S N Q C M L S L L G L H L A I N P D - S H Q I N A C Y H Y - A . . . . . . 142183 GAATTTTGTGGGATTCGAACATGACACAGACTCACCATGCACTAACACCTATCCACTTCA E F C G I R T - H R L T M H - H L S T S N F V G F E H D T D S P C T N T Y P L Q - I L W D S N M T Q T H H A L T P I H F . . . . . . 142123 ATTTCTCACCGAGGTGCTAACAATTCCGGTATTGCAACTAGTGTCCTCACTTTAGAACAA I S H R G A N N S G I A T S V L T L E Q F L T E V L T I P V L Q L V S S L - N K N F S P R C - Q F R Y C N - C P H F R T . . . . . 142063 AATCCTCATTTTTCATACAATGATTTCAGTTTGAGTATAAGGATTAC N P H F S Y N D F S L S I R I I L I F H T M I S V - V - G L K S S F F I Q - F Q F E Y K D Y Maximal non-overlapping open reading frames (>= 64 codons): >C10HBa0115K16.1-_PGL-18_AGS-2_PPS_1 (142368 142069) (frame '2'; 297 bp, 99 residues) 1 LCREITVYQH PQLKFVVCPQ ATHYDSLHNL CTIVFMFYPL QSFGYQSRLI SSNQCMLSLL 61 GLNFVGFEHD TDSPCTNTYP LQFLTEVLTI PVLQLVSSL- >C10HBa0115K16.1-_PGL-18_AGS-2_PPS_2 (142606 142358) (frame '1'; 246 bp, 82 residues) 1 SHTWSDFPIF LQQLLYAATY GPSEARRTVI SSVGWSLLHF LLKISAFIFG QIPAKQRETY 61 IKISTKKAFG HTKLKEKVLI MP- PGL 19 (+ strand): 146330 153642 AGS-1 (146330 146573,148279 148350,148437 148561,148661 148821,149410 149479,149997 150051,150687 150770,151334 151372,152285 152331,153336 153642) SCR (e 1.000 d 1.000 a 0.985,e 1.000 d 0.987 a 0.853,e 1.000 d 0.986 a 0.869,e 1.000 d 0.742 a 0.958,e 0.957 d 0.988 a 0.941,e 1.000 d 0.917 a 0.291,e 1.000 d 0.957 a 0.915,e 1.000 d 0.967 a 0.791,e 1.000 d 0.972 a 0.842,e 1.000) Exon 1 146330 146573 ( 244 n); score: 1.000 Intron 1 146574 148278 (1705 n); Pd: 1.000 Pa: 0.985 Exon 2 148279 148350 ( 72 n); score: 1.000 Intron 2 148351 148436 ( 86 n); Pd: 0.987 Pa: 0.853 Exon 3 148437 148561 ( 125 n); score: 1.000 Intron 3 148562 148660 ( 99 n); Pd: 0.986 Pa: 0.869 Exon 4 148661 148821 ( 161 n); score: 1.000 Intron 4 148822 149409 ( 588 n); Pd: 0.742 Pa: 0.958 Exon 5 149410 149479 ( 70 n); score: 0.957 Intron 5 149480 149996 ( 517 n); Pd: 0.988 Pa: 0.941 Exon 6 149997 150051 ( 55 n); score: 1.000 Intron 6 150052 150686 ( 635 n); Pd: 0.917 Pa: 0.291 Exon 7 150687 150770 ( 84 n); score: 1.000 Intron 7 150771 151333 ( 563 n); Pd: 0.957 Pa: 0.915 Exon 8 151334 151372 ( 39 n); score: 1.000 Intron 8 151373 152284 ( 912 n); Pd: 0.967 Pa: 0.791 Exon 9 152285 152331 ( 47 n); score: 1.000 Intron 9 152332 153335 (1004 n); Pd: 0.972 Pa: 0.842 Exon 10 153336 153642 ( 307 n); score: 1.000 PGS (146330 146573,148279 148350,148437 148561,148661 148821,149410 149479,149997 150043) SGN-E332633+ PGS (150008 150051,150687 150770,151334 151372,152285 152331,153336 153642) SGN-E292396+ 3-phase translation of AGS-1 (+strand): . . . . . . 146330 TCTATTATACACTTGTATCCTTTTCCCATTTCCAAACATCCGAGTGTAGAGTTGGAAAAT S I I H L Y P F P I S K H P S V E L E N L L Y T C I L F P F P N I R V - S W K I Y Y T L V S F S H F Q T S E C R V G K . . . . . . 146390 TTTGGTGGATATTGAAGAAAATGCTGAATGATGAAGTAGTGTTACATCCATGAAAGGTAT F G G Y - R K C - M M K - C Y I H E R Y L V D I E E N A E - - S S V T S M K G I F W W I L K K M L N D E V V L H P - K V . . . . . . 146450 ATCTTTCTCACAAACACTATCAGCCTTTGCACTAACATACATTGGCTGTGCTACATGTAA I F L T N T I S L C T N I H W L C Y M - S F S Q T L S A F A L T Y I G C A T C N Y L S H K H Y Q P L H - H T L A V L H V . . . . . . 146510 CAGCTACGTCAAACCCACAATTGTTGCTAAGAAGAGCAACAATTCCCACACACCCTCTGC Q L R Q T H N C C - E E Q Q F P H T L C S Y V K P T I V A K K S N N S H T P S A T A T S N P Q L L L R R A T I P T H P L . : . . . . . 146570 TAAG : GATACTGATATGCCCCCTCCAAGGATTACATCAAAATTGAAGCAGAATTTGCAGTT - : G Y - Y A P S K D Y I K I E A E F A V K : D T D M P P P R I T S K L K Q N L Q F L R : I L I C P L Q G L H Q N - S R I C S . . : . . . . 148335 CCTAAAATTATGGAAG : GAGTTCCAAAAGAGAAAATCCAGTACTCCAAAGCCTGCTACTAG P K I M E : G V P K E K I Q Y S K A C Y - L K L W K : E F Q K R K S S T P K P A T S S - N Y G R : S S K R E N P V L Q S L L L . . . . . . 148481 TTATCGTAAGAAGAAGGTGGAGAAGGAAGAACTGCCTGACGATGAAGAGATCTACCGCGA L S - E E G G E G R T A - R - R D L P R Y R K K K V E K E E L P D D E E I Y R D V I V R R R W R R K N C L T M K R S T A . . . : . . . 148541 TCCTACATTGGCACTATACTA : TACAAATCAGGTATTAGATACTGTTGTTCCAGTCTTGCT S Y I G T I L : Y K S G I R Y C C S S L A P T L A L Y Y : T N Q V L D T V V P V L L I L H W H Y T : I Q I R Y - I L L F Q S C . . . . . . 148700 TGTTGATGGATATAATGTGTGTGGATATTGGCCAAAGTTGAAGAAGCATTTTATGAATGG C - W I - C V W I L A K V E E A F Y E W V D G Y N V C G Y W P K L K K H F M N G L L M D I M C V D I G Q S - R S I L - M . . . . . . 148760 AAGCCTTGACATTGCTCGTCAAAAACTCATTGATGAACTTGTATCATTCAGTTTGCTAAG K P - H C S S K T H - - T C I I Q F A K S L D I A R Q K L I D E L V S F S L L R E A L T L L V K N S L M N L Y H S V C - . : . . . . . 148820 AG : AGGTGAAAGTGGTGGTGGTGTTTGATGCTATGATGTCTGGAATGGCTACACACAAGGA R : G E S G G G V - C Y D V W N G Y T Q G : E V K V V V V F D A M M S G M A T H K E E : R - K W W W C L M L - C L E W L H T R . . : . . . . 149468 AGACTTTGAGGG : TGTTGATATAGTATATTCAAGTGAAACATGTGCTGATGCATGGATTGA R L - G : C - Y S I F K - N M C - C M D - D F E G : V D I V Y S S E T C A D A W I E K T L R : V L I - Y I Q V K H V L M H G L . : . . . . . 150045 GAAGGAG : GTGGTCGCTTTAAGGCAGGATGGGTGTCCAAAAGTATGGGTTGTCACATCTGA E G : G G R F K A G W V S K S M G C H I - K E : V V A L R Q D G C P K V W V V T S D R R R : W S L - G R M G V Q K Y G L S H L . . . . : . . 150740 TCATAATCAGCAGCATGCAGCCTATGGAGCA : GGGGCTTTTGTTTGGAGCTGCAAGGCATT S - S A A C S L W S : R G F C L E L Q G I H N Q Q H A A Y G A : G A F V W S C K A L I I I S S M Q P M E Q : G L L F G A A R H . : . . . . . : 151363 AATCTCTGAG : ATCAAAGCTTCACACAAGGAGGTTGAGAGAATGCTGCGGGAACATAG : ATC N L - : D Q S F T Q G G - E N A A G T - : I I S E : I K A S H K E V E R M L R E H R : S - S L R : S K L H T R R L R E C C G N I : D . . . . . . 153339 TACTTCTATGCAAGGTAAATTGTTAAAGCACAACCTCGCTGCAGAAGTTGTGGATGCTCT Y F Y A R - I V K A Q P R C R S C G C S T S M Q G K L L K H N L A A E V V D A L L L L C K V N C - S T T S L Q K L W M L . . . . . . 153399 TAAGGACCTCAGGGACCAGCTTTCTCAAAATGAGATGCGCAGATGACAAGTCTCACAAAA - G P Q G P A F S K - D A Q M T S L T K K D L R D Q L S Q N E M R R - Q V S Q K L R T S G T S F L K M R C A D D K S H K . . . . . . 153459 GGCTATGTCAGAGACAAAACAGAATTTTAAGTCAATGGATGTTAAGTTCTAACTGCACTA G Y V R D K T E F - V N G C - V L T A L A M S E T K Q N F K S M D V K F - L H - R L C Q R Q N R I L S Q W M L S S N C T . . . . . . 153519 GTAACTTTGTGACAGTATATTTGGATGAGTGTTATCGATACATGTATACTAAATGTTTCA V T L - Q Y I W M S V I D T C I L N V S - L C D S I F G - V L S I H V Y - M F Q S N F V T V Y L D E C Y R Y M Y T K C F . . . . . . 153579 ACCACACGTGTACATCTTGTGCTGATGATACGTTAAACATGCAAAGATCATGTTCCTGCC T T R V H L V L M I R - T C K D H V P A P H V Y I L C - - Y V K H A K I M F L P N H T C T S C A D D T L N M Q R S C S C . 153639 TCAA S Q L Maximal non-overlapping open reading frames (>= 64 codons): >C10HBa0115K16.1+_PGL-19_AGS-1_PPS_1 (146424 146573,148279 148350,148437 148561,148661 148821,149410 149479,149997 150051,150687 150770,151334 151372,152285 152331,153336 153444) (frame '2'; 909 bp, 303 residues) 1 SSVTSMKGIS FSQTLSAFAL TYIGCATCNS YVKPTIVAKK SNNSHTPSAK DTDMPPPRIT 61 SKLKQNLQFL KLWKEFQKRK SSTPKPATSY RKKKVEKEEL PDDEEIYRDP TLALYYTNQV 121 LDTVVPVLLV DGYNVCGYWP KLKKHFMNGS LDIARQKLID ELVSFSLLRE VKVVVVFDAM 181 MSGMATHKED FEGVDIVYSS ETCADAWIEK EVVALRQDGC PKVWVVTSDH NQQHAAYGAG 241 AFVWSCKALI SEIKASHKEV ERMLREHRST SMQGKLLKHN LAAEVVDALK DLRDQLSQNE 301 MRR- AGS-2 (146924 147079) SCR (e 0.981) Exon 1 146924 147079 ( 156 n); score: 0.981 PGS (146924 147079) SGN-E550037- PGS (146924 147079) SGN-E232987- PGS (146925 147079) SGN-E376857- 3-phase translation of AGS-2 (+strand): . . . . . . 146924 TAAATAGTTTGTCGGCCAATTATGTAAAGTAAATAGTATGACGGTGTAATTTATGTGTAT - I V C R P I M - S K - Y D G V I Y V Y K - F V G Q L C K V N S M T V - F M C I N S L S A N Y V K - I V - R C N L C V . . . . . . 146984 AAATAGAGGAGCTTTCCTCATAAATAAAACACACCTTCATCCTTACATCTCTCTTCTTTC K - R S F P H K - N T P S S L H L S S F N R G A F L I N K T H L H P Y I S L L S - I E E L S S - I K H T F I L T S L F F . . . . 147044 TGAATACTCTCTCTTTACGCTTCCACCCCAAAATTG - I L S L Y A S T P K L E Y S L F T L P P Q N L N T L S L R F H P K I Maximal non-overlapping open reading frames (>= 64 codons): none 3-phase translation of AGS-2 (-strand): . . . . . . 147079 CAATTTTGGGGTGGAAGCGTAAAGAGAGAGTATTCAGAAAGAAGAGAGATGTAAGGATGA Q F W G G S V K R E Y S E R R E M - G - N F G V E A - R E S I Q K E E R C K D E I L G W K R K E R V F R K K R D V R M . . . . . . 147019 AGGTGTGTTTTATTTATGAGGAAAGCTCCTCTATTTATACACATAAATTACACCGTCATA R C V L F M R K A P L F I H I N Y T V I G V F Y L - G K L L Y L Y T - I T P S Y K V C F I Y E E S S S I Y T H K L H R H . . . . 146959 CTATTTACTTTACATAATTGGCCGACAAACTATTTA L F T L H N W P T N Y L Y L L Y I I G R Q T I T I Y F T - L A D K L F Maximal non-overlapping open reading frames (>= 64 codons): none AGS-3 (151879 151999) SCR (e 0.939) Exon 1 151879 151999 ( 121 n); score: 0.939 PGS (151879 151998) SGN-E347002- PGS (151902 151999) SGN-E250381- 3-phase translation of AGS-3 (+strand): . . . . . . 151879 TATGTTGCTCGGACTCTTAAAAAATGTCAATGGGTGCGTGTCGGATTCGCCAAAAGTAGT Y V A R T L K K C Q W V R V G F A K S S M L L G L L K N V N G C V S D S P K V V C C S D S - K M S M G A C R I R Q K - . . . . . . 151939 GTATTTGTGAAGAATCCGAGACGGGTGTGGCATCAAAAGTGAAGAGTCCGCGCAACTAAG V F V K N P R R V W H Q K - R V R A T K Y L - R I R D G C G I K S E E S A Q L R C I C E E S E T G V A S K V K S P R N - . 151999 G Maximal non-overlapping open reading frames (>= 64 codons): none 3-phase translation of AGS-3 (-strand): . . . . . . 151999 CCTTAGTTGCGCGGACTCTTCACTTTTGATGCCACACCCGTCTCGGATTCTTCACAAATA P - L R G L F T F D A T P V S D S S Q I L S C A D S S L L M P H P S R I L H K Y L V A R T L H F - C H T R L G F F T N . . . . . . 151939 CACTACTTTTGGCGAATCCGACACGCACCCATTGACATTTTTTAAGAGTCCGAGCAACAT H Y F W R I R H A P I D I F - E S E Q H T T F G E S D T H P L T F F K S P S N I T L L L A N P T R T H - H F L R V R A T . 151879 A Maximal non-overlapping open reading frames (>= 64 codons): none PGL 20 (- strand): 154581 153992 AGS-1 (154581 153992) SCR (e 0.819) Exon 1 154581 153992 ( 590 n); score: 0.819 PGS (154581 153992) SGN-E350708+ 3-phase translation of AGS-1 (-strand): . . . . . . 154581 GGGGATTTGGTGCTTTTATTCAATTCTAGGTTGCGCTTGTTTCCGGGCAAGCTCAAGTCC G D L V L L F N S R L R L F P G K L K S G I W C F Y S I L G C A C F R A S S S P G F G A F I Q F - V A L V S G Q A Q V . . . . . . 154521 AAATGGACTAGTCCTTACATGGTTACCCAACTATTCCCTCATGGAGCAATTGAGTTGGAA K W T S P Y M V T Q L F P H G A I E L E N G L V L T W L P N Y S L M E Q L S W K Q M D - S L H G Y P T I P S W S N - V G . . . . . . 154461 ACTAAGGAGGGTGTGCGGTTCAAGGTGAATGGACAACACATAAAAATCTATTTCGGGCAT T K E G V R F K V N G Q H I K I Y F G H L R R V C G S R - M D N T - K S I S G M N - G G C A V Q G E W T T H K N L F R A . . . . . . 154401 GCTGAATCAGCGAATGAAGTCATCGAGGCATACCATCTTGATGAATTCTGAGTAATCAAG A E S A N E V I E A Y H L D E F - V I K L N Q R M K S S R H T I L M N S E - S S C - I S E - S H R G I P S - - I L S N Q . . . . . . 154341 TGTCCTCAGTCGTGCTTCGACGTTAAATTAGGCGCTTGTTGGGAGGCAACCCAATACTTA C P Q S C F D V K L G A C W E A T Q Y L V L S R A S T L N - A L V G R Q P N T Y V S S V V L R R - I R R L L G G N P I L . . . . . . 154281 TAGTTTTTCTTTCTAGTAATGGTAGCATTTTCTACTCATGGGTTTTAAATTTGCAGGTAC - F F F L V M V A F S T H G F - I C R Y S F S F - - W - H F L L M G F K F A G T I V F L S S N G S I F Y S W V L N L Q V . . . . . . 154221 ATCACCAGGAAATTCTGCAAAAAATCACTCTGCAACAGTCACTGACGCACACGAGGATGG I T R K F C K K S L C N S H - R T R G W S P G N S A K N H S A T V T D A H E D G H H Q E I L Q K I T L Q Q S L T H T R M . . . . . . 154161 ACCGTCACTCATGCGACGGACTGTCGCATGAATCCGTCGTGTCAGGTATGTCTTTCTGTT T V T H A T D C R M N P S C Q V C L S V P S L M R R T V A - I R R V R Y V F L L D R H S C D G L S H E S V V S G M S F C . . . . . . 154101 ATTTTTAAAACTAGGGCACACGCGACTGAACCAACGACGGACCGTCACAACTGCTATGGA I F K T R A H A T E P T T D R H N C Y G F L K L G H T R L N Q R R T V T T A M D Y F - N - G T R D - T N D G P S Q L L W . . . . . 154041 CCGTCATTGGGGACTCGTCACGTTATTAATGAAGCATACCTGACCCGAAA P S L G T R H V I N E A Y L T R R H W G L V T L L M K H T - P E T V I G D S S R Y - - S I P D P K Maximal non-overlapping open reading frames (>= 64 codons): >C10HBa0115K16.1-_PGL-20_AGS-1_PPS_1 (154581 154351) (frame '1'; 228 bp, 76 residues) 1 GDLVLLFNSR LRLFPGKLKS KWTSPYMVTQ LFPHGAIELE TKEGVRFKVN GQHIKIYFGH 61 AESANEVIEA YHLDEF- >C10HBa0115K16.1-_PGL-20_AGS-1_PPS_2 (154315 154094) (frame '0'; 219 bp, 73 residues) 1 IRRLLGGNPI LIVFLSSNGS IFYSWVLNLQ VHHQEILQKI TLQQSLTHTR MDRHSCDGLS 61 HESVVSGMSF CYF- 3-phase translation of AGS-1 (+strand): . . . . . . 153992 TTTCGGGTCAGGTATGCTTCATTAATAACGTGACGAGTCCCCAATGACGGTCCATAGCAG F R V R Y A S L I T - R V P N D G P - Q F G S G M L H - - R D E S P M T V H S S S G Q V C F I N N V T S P Q - R S I A . . . . . . 154052 TTGTGACGGTCCGTCGTTGGTTCAGTCGCGTGTGCCCTAGTTTTAAAAATAACAGAAAGA L - R S V V G S V A C A L V L K I T E R C D G P S L V Q S R V P - F - K - Q K D V V T V R R W F S R V C P S F K N N R K . . . . . . 154112 CATACCTGACACGACGGATTCATGCGACAGTCCGTCGCATGAGTGACGGTCCATCCTCGT H T - H D G F M R Q S V A - V T V H P R I P D T T D S C D S P S H E - R S I L V T Y L T R R I H A T V R R M S D G P S S . . . . . . 154172 GTGCGTCAGTGACTGTTGCAGAGTGATTTTTTGCAGAATTTCCTGGTGATGTACCTGCAA V R Q - L L Q S D F L Q N F L V M Y L Q C V S D C C R V I F C R I S W - C T C K C A S V T V A E - F F A E F P G D V P A . . . . . . 154232 ATTTAAAACCCATGAGTAGAAAATGCTACCATTACTAGAAAGAAAAACTATAAGTATTGG I - N P - V E N A T I T R K K N Y K Y W F K T H E - K M L P L L E R K T I S I G N L K P M S R K C Y H Y - K E K L - V L . . . . . . 154292 GTTGCCTCCCAACAAGCGCCTAATTTAACGTCGAAGCACGACTGAGGACACTTGATTACT V A S Q Q A P N L T S K H D - G H L I T L P P N K R L I - R R S T T E D T - L L G C L P T S A - F N V E A R L R T L D Y . . . . . . 154352 CAGAATTCATCAAGATGGTATGCCTCGATGACTTCATTCGCTGATTCAGCATGCCCGAAA Q N S S R W Y A S M T S F A D S A C P K R I H Q D G M P R - L H S L I Q H A R N S E F I K M V C L D D F I R - F S M P E . . . . . . 154412 TAGATTTTTATGTGTTGTCCATTCACCTTGAACCGCACACCCTCCTTAGTTTCCAACTCA - I F M C C P F T L N R T P S L V S N S R F L C V V H S P - T A H P P - F P T Q I D F Y V L S I H L E P H T L L S F Q L . . . . . . 154472 ATTGCTCCATGAGGGAATAGTTGGGTAACCATGTAAGGACTAGTCCATTTGGACTTGAGC I A P - G N S W V T M - G L V H L D L S L L H E G I V G - P C K D - S I W T - A N C S M R E - L G N H V R T S P F G L E . . . . . 154532 TTGCCCGGAAACAAGCGCAACCTAGAATTGAATAAAAGCACCAAATCCCC L P G N K R N L E L N K S T K S C P E T S A T - N - I K A P N P L A R K Q A Q P R I E - K H Q I P Maximal non-overlapping open reading frames (>= 64 codons): none PGL 21 (+ strand): 155223 156595 AGS-1 (155223 155645,155676 156595) SCR (e 0.877 d 0.000 a 0.000,e 0.907) Exon 1 155223 155645 ( 423 n); score: 0.877 Intron 1 155646 155675 ( 30 n); Pd: 0.000 Pa: 0.000 Exon 2 155676 156595 ( 920 n); score: 0.907 PGS (155223 155645,155676 155940) SGN-E395434- PGS (155430 155645,155676 155939) SGN-E205922- PGS (155762 156489) SGN-E356787+ PGS (155865 156595) SGN-E577717+ 3-phase translation of AGS-1 (+strand): . . . . . . 155223 ATTAAATAACTCAATCACAAGAATGAGGTTTAGAGGGAGCTCTTGCTTTCTTAAAATGCC I K - L N H K N E V - R E L L L S - N A L N N S I T R M R F R G S S C F L K M P - I T Q S Q E - G L E G A L A F L K C . . . . . . 155283 GCCATCTCGTGGGCATCGATCACATGCTTTAGCAAACTCATGAGCATCTTGATGAAGAGT A I S W A S I T C F S K L M S I L M K S P S R G H R S H A L A N S - A S - - R V R H L V G I D H M L - Q T H E H L D E E . . . . . . 155343 TAGCCAATGTAACCACATTGTAATATCTTATGAGCGGTTCGGATACCGCTATGATGTCCA - P M - P H C N I L - A V R I P L - C P S Q C N H I V I S Y E R F G Y R Y D V H L A N V T T L - Y L M S G S D T A M M S . . . . . . 155403 CAAACGGGTGAGGAATGGCATGCTTCTAACACACTCAACATCTCACATTCTGGCACAAAA Q T G E E W H A S N T L N I S H S G T K K R V R N G M L L T H S T S H I L A Q N T N G - G M A C F - H T Q H L T F W H K . . . . . . 155463 CACCGAATAAGCCCGTCGGCACAACTCTTATATAAGTATGGTTCATCCCAAAAGAACATC H R I S P S A Q L L Y K Y G S S Q K N I T E - A R R H N S Y I S M V H P K R T S T P N K P V G T T L I - V W F I P K E H . . . . . . 155523 TTCACATCGTACATGAACTTTTCTTTTGATGAAAGGACAAGTTCGATGGAACAATATCAC F T S Y M N F S F D E R T S S M E Q Y H S H R T - T F L L M K G Q V R W N N I T L H I V H E L F F - - K D K F D G T I S . . . . . . 155583 TAGCCAGATAGTTCGCAAAATCTGCGAACCATGGAGTCAAGTCTTATGAAGCAGCCAATA - P D S S Q N L R T M E S S L M K Q P I S Q I V R K I C E P W S Q V L - S S Q Y L A R - F A K S A N H G V K S Y E A A N . : . . . . . 155643 CAT : TCTTATCCCCTAACTCTCTCATAGCTTCATCCTCTAGATGGGACAAATGATCAACAA H : S Y P L T L S - L H P L D G T N D Q Q I : L I P - L S H S F I L - M G Q M I N N T : F L S P N S L I A S S S R W D K - S T . . . . . . 155733 CCTGATTTTCAGTTCCTTTTCAATCCATCACTTCAAAGTCAAATTCTTGTAGCAGTAATA P D F Q F L F N P S L Q S Q I L V A V I L I F S S F S I H H F K V K F L - Q - Y T - F S V P F Q S I T S K S N S C S S N . . . . . . 155793 CCTAACAAATCAACCTAGGTTTCGCATCCTTCTTTGCTATCAAATATCTCAACGCTGAGT P N K S T - V S H P S L L S N I S T L S L T N Q P R F R I L L C Y Q I S Q R - V T - Q I N L G F A S F F A I K Y L N A E . . . . . . 155853 GGTCAGTATGAACTATAACTCTAGTACCTAGAAAATAGGAGAGAAATTTTTCAAAAGGAA G Q Y E L - L - Y L E N R R E I F Q K E V S M N Y N S S T - K I G E K F F K R K W S V - T I T L V P R K - E R N F S K G . . . . . . 155913 AGACTACTGCAAGGAGTTCTTGCTCAGTCACTGTGTAGTTCTTCTGAGCTTCATTTAGGG R L L Q G V L A Q S L C S S S E L H L G D Y C K E F L L S H C V V L L S F I - G K T T A R S S C S V T V - F F - A S F R . . . . . . 155973 CTTTACTAGCATGGTAAATGGGGTGAAGGATTTTGTTCTTTCTTTATCCCAATACTACAC L Y - H G K W G E G F C S F F I P I L H F T S M V N G V K D F V L S L S Q Y Y T A L L A W - M G - R I L F F L Y P N T T . . . . . . 156033 CAAGAACAACCCCACTAGCATCACACATCACCTTAAATGGACTGTTTTAATCCGGAGAAA Q E Q P H - H H T S P - M D C F N P E K K N N P T S I T H H L K W T V L I R R N P R T T P L A S H I T L N G L F - S G E . . . . . . 156093 TAATGATAGGTGCAGACACCATTTTTTCTTTTAGCTCGCCGAATGCTTTAAGACAGGATT - - - V Q T P F F L L A R R M L - D R I N D R C R H H F F F - L A E C F K T G F I M I G A D T I F S F S S P N A L R Q D . . . . . . 156153 CATCAAAACAAAATTTACAATCTTTTTCCAGCACTTTGCACAATGGATGTGCAATATTTG H Q N K I Y N L F P A L C T M D V Q Y L I K T K F T I F F Q H F A Q W M C N I - S S K Q N L Q S F S S T L H N G C A I F . . . . . . 156213 AAAAGTCTTTGATGAATCTCCGGTAAAAACCTGCATGCCCAAGAAAGCTTCTCACACCTT K S L - - I S G K N L H A Q E S F S H L K V F D E S P V K T C M P K K A S H T F E K S L M N L R - K P A C P R K L L T P . . . . . . 156273 TCACAGAGATCGGTGGGGGAAGTCTCTCTATTACCTCGACTTTAGCTCGATCAACCTCTA S Q R S V G E V S L L P R L - L D Q P L H R D R W G K S L Y Y L D F S S I N L Y F T E I G G G S L S I T S T L A R S T S . . . . . . 156333 TGCCCTTTTCTAAACTGTCATGACCCAAAACAATACCTTCTTTCACCATGAAATGACATT C P F L N C H D P K Q Y L L S P - N D I A L F - T V M T Q N N T F F H H E M T F M P F S K L S - P K T I P S F T M K - H . . . . . . 156393 TTTTCCAATTTAGTACTAAATTGCAGTCTTCACTTCTCTTAAGGACCTCAGATAAATTGT F S N L V L N C S L H F S - G P Q I N C F P I - Y - I A V F T S L K D L R - I V F F Q F S T K L Q S S L L L R T S D K L . . . . . . 156453 TCAAACACCGCTCGAATGAATCACAAACCACAGAAAAATCATCCATAAAAACTTCTATAG S N T A R M N H K P Q K N H P - K L L - Q T P L E - I T N H R K I I H K N F Y S F K H R S N E S Q T T E K S S I K T S I . . . . . . 156513 TTTCTTCCACCATGTCGGAAAATATCAACATCATACATCTCTGAAATGTGGCGGGTGCAT F L P P C R K I S T S Y I S E M W R V H F F H H V G K Y Q H H T S L K C G G C I V S S T M S E N I N I I H L - N V A G A . . . 156573 TGCACAACCCAAACGACATTCTT C T T Q T T F A Q P K R H S L H N P N D I L Maximal non-overlapping open reading frames (>= 64 codons): none PGL 22 (+ strand): 159863 160237 AGS-1 (159863 159888,160008 160237) SCR (e 0.692 d 0.983 a 0.000,e 0.885) Exon 1 159863 159888 ( 26 n); score: 0.692 Intron 1 159889 160007 ( 119 n); Pd: 0.983 Pa: 0.000 Exon 2 160008 160237 ( 230 n); score: 0.885 PGS (159863 159888,160008 160237) SGN-E577830- 3-phase translation of AGS-1 (+strand): . . . : . . . 159863 GCAAGAATCAAAAACAATAAAACAAA : TAAAGCGGCCGTGTCAAGTAAATAACCCAACTAA A R I K N N K T N : K A A V S S K - P N - Q E S K T I K Q : I K R P C Q V N N P T N K N Q K Q - N K : - S G R V K - I T Q L . . . . . . 160042 TGAGGTTGGGATCGTTCCCACGAGGAAAATAGTTTAGACTAACTTCAGTCTATTATTACT - G W D R S H E E N S L D - L Q S I I T E V G I V P T R K I V - T N F S L L L L M R L G S F P R G K - F R L T S V Y Y Y . . . . . . 160102 ACTGTTCAGTCAATTGCTTTCTTGGAAAGCAAAAATGATAAAAAGGGGGGTTTTCTATTT T V Q S I A F L E S K N D K K G G F L F L F S Q L L S W K A K M I K R G V F Y F Y C S V N C F L G K Q K - - K G G F S I . . . . . . 160162 CTAAATGAAAGAAAATAACTAGCGAAATTAAAGGAGACAACTAACAGCTTCAAATGTTGG L N E R K - L A K L K E T T N S F K C W - M K E N N - R N - R R Q L T A S N V G S K - K K I T S E I K G D N - Q L Q M L . . 160222 AGTTTAATCAATTCAT S L I N S V - S I H E F N Q F Maximal non-overlapping open reading frames (>= 64 codons): none PGL 23 (- strand): 161612 160077 AGS-1 (161612 160899,160846 160077) SCR (e 0.856 d 0.000 a 0.000,e 0.892) Exon 1 161612 160899 ( 714 n); score: 0.856 Intron 1 160898 160847 ( 52 n); Pd: 0.000 Pa: 0.000 Exon 2 160846 160077 ( 770 n); score: 0.892 PGS (160764 160077) SGN-E241731- PGS (161233 160899,160846 160607) SGN-E550629- PGS (161233 160899,160846 160607) SGN-E550645- PGS (161045 160899,160846 160608) SGN-E273427- PGS (161502 160949) SGN-E546519- PGS (161502 160963) SGN-E261921+ PGS (161502 161031) SGN-E322644+ PGS (161609 161057) SGN-E346859+ PGS (161504 161061) SGN-E243137+ PGS (161608 161085) SGN-E540293- PGS (161608 161085) SGN-E286708- PGS (161502 161098) SGN-E258752+ PGS (161612 161108) SGN-E352282- PGS (161589 161108) SGN-E243969- PGS (161502 161132) SGN-E255290+ 3-phase translation of AGS-1 (-strand): . . . . . . 161612 GTCTTGATATACCGTGGTTTCACGGTATTTTTAATGCTTTTTCCTTAAGTTTAGTGGGTC V L I Y R G F T V F L M L F P - V - W V S - Y T V V S R Y F - C F F L K F S G S L D I P W F H G I F N A F S L S L V G . . . . . . 161552 CAAAAGCCTTTTTGTACTAATTTTTATGTAAGTTTCTCTTTATTTGCAAGAAATCTATCT Q K P F C T N F Y V S F S L F A R N L S K S L F V L I F M - V S L Y L Q E I Y L P K A F L Y - F L C K F L F I C K K S I . . . . . . 161492 AAAAGATGAATACGGAGGTTTTTGAGTGAGAAATATAGAAAAGTACCACCTACGGAGCTT K R - I R R F L S E K Y R K V P P T E L K D E Y G G F - V R N I E K Y H L R S L - K M N T E V F E - E I - K S T T Y G A . . . . . . 161432 GTGACGGTTCGTCATGCCCGTGACGGTCCGTAGGTGGCATCGTAGTGCAGCTGCTGAAGG V T V R H A R D G P - V A S - C S C - R - R F V M P V T V R R W H R S A A A E G C D G S S C P - R S V G G I V V Q L L K . . . . . . 161372 AAGATGGGGAAGTCTGACAAAGTGTGGGGTTACGGAGTGCGTGACATACCGTCATAGCCA K M G K S D K V W G Y G V R D I P S - P R W G S L T K C G V T E C V T Y R H S H E D G E V - Q S V G L R S A - H T V I A . . . . . . 161312 TGACGGTCCGTCCTGCTAGTTTGTCATGAAGATCAGAGAAGTAGTCGTAGTACCCAAATT - R S V L L V C H E D Q R S S R S T Q I D G P S C - F V M K I R E V V V V P K F M T V R P A S L S - R S E K - S - Y P N . . . . . . 161252 CCAAGAGTTCAAGTGTTTTGGAGCGGAGACCCTTGACGGACCGTTGTTCCTGTGACGATC P R V Q V F W S G D P - R T V V P V T I Q E F K C F G A E T L D G P L F L - R S S K S S S V L E R R P L T D R C S C D D . . . . . . 161192 CATCATACCTGCCGTCGAGGGTAATGAAGAGAGCAACACAATAAATTGCACAAGTTTGGG H H T C R R G - - R E Q H N K L H K F G I I P A V E G N E E S N T I N C T S L G P S Y L P S R V M K R A T Q - I A Q V W . . . . . . 161132 ACGACGGAGTCCATGACGGTCCATCGTGACCACGACGATCCGTCGCGAGGTCCGTCGATC T T E S M T V H R D H D D P S R G P S I R R S P - R S I V T T T I R R E V R R S D D G V H D G P S - P R R S V A R S V D . . . . . . 161072 CAACCACATTTTGACAGATTTCCAGCAAATAGAGTCCTAATTTAATTAGGTTTTAATTTT Q P H F D R F P A N R V L I - L G F N F N H I L T D F Q Q I E S - F N - V L I F P T T F - Q I S S K - S P N L I R F - F . . . . . . 161012 TTATAAATAGTTTGAAAAACCTCATTTTTGAGGTTAGACCCTTGATTGTTTTTAGACTCT L - I V - K T S F L R L D P - L F L D S Y K - F E K P H F - G - T L D C F - T L F I N S L K N L I F E V R P L I V F R L . . . . . . : 160952 TTGTTAGACTCTTGATTTTTGAGCTTCTTTTGTGGATTAGACTTGAGGATTATT : ATTGAT L L D S - F L S F F C G L D L R I I : I D C - T L D F - A S F V D - T - G L L : L I F V R L L I F E L L L W I R L E D Y : Y - . . . . . . 160840 TGTTGGTGATTTTTGGTGATTAATCAAGTGAACTTTCGGATTTTACTCTTTCTCATTGAA C W - F L V I N Q V N F R I L L F L I E V G D F W - L I K - T F G F Y S F S L K L L V I F G D - S S E L S D F T L S H - . . . . . . 160780 GTAAGTGCATGAATTCTTATATCATATATTTGAATATTGTGATTATGACTATGGGCAACT V S A - I L I S Y I - I L - L - L W A T - V H E F L Y H I F E Y C D Y D Y G Q L S K C M N S Y I I Y L N I V I M T M G N . . . . . . 160720 AAACTCCATAACTAGGGTTGTGGGAACCATAGCCGAATAATTGTGTAAAACCTAACTAAA K L H N - G C G N H S R I I V - N L T K N S I T R V V G T I A E - L C K T - L K - T P - L G L W E P - P N N C V K P N - . . . . . . 160660 ATAACAATTCTAGAATAGTGTTATGCATGTATTGATAATTCTTTCGCTTAGAAGTCTTTT I T I L E - C Y A C I D N S F A - K S F - Q F - N S V M H V L I I L S L R S L F N N N S R I V L C M Y - - F F R L E V F . . . . . . 160600 TAACGGATGGCCAACGTTAGAAGTCGCCTTAATGCTACTTGCCGGACCAAGGAGGTAGAT - R M A N V R S R L N A T C R T K E V D N G W P T L E V A L M L L A G P R R - I L T D G Q R - K S P - C Y L P D Q G G R . . . . . . 160540 AATAGGAAAAGAATTATCAACATAGATTTAGTGTATACTATCTAAAAGGCTAGTTTTTAT N R K R I I N I D L V Y T I - K A S F Y I G K E L S T - I - C I L S K R L V F I - - E K N Y Q H R F S V Y Y L K G - F L . . . . . . 160480 TGATATGAGGTAATAACTTAGTCACATATCGAGTACGATGCTTAATATGAGGTAAAGATA - Y E V I T - S H I E Y D A - Y E V K I D M R - - L S H I S S T M L N M R - R - L I - G N N L V T Y R V R C L I - G K D . . . . . . 160420 AGGGTTAGTATAGCAACACACGTACCCGGACCAAGGTGCGGAGTGAAATTTTCTAGATGC R V S I A T H V P G P R C G V K F S R C G L V - Q H T Y P D Q G A E - N F L D A K G - Y S N T R T R T K V R S E I F - M . . . . . . 160360 CAGACCAAGGATTTAGAAATACATAACTTATCACTTTGCATGCAAGATACTAGGAAAGAA Q T K D L E I H N L S L C M Q D T R K E R P R I - K Y I T Y H F A C K I L G K N P D Q G F R N T - L I T L H A R Y - E R . . . . . . 160300 TTATTATAGTTCGAATTATCAATTTATGAAACTGTGGGGAACATGTAAACCCTAGTTACT L L - F E L S I Y E T V G N M - T L V T Y Y S S N Y Q F M K L W G T C K P - L L I I I V R I I N L - N C G E H V N P S Y . . . . . . 160240 TTTATGAATTGATTAAACTCCAACATTTGAAGCTGTTAGTTGTCTCCTTTAATTTCGCTA F M N - L N S N I - S C - L S P L I S L L - I D - T P T F E A V S C L L - F R - F Y E L I K L Q H L K L L V V S F N F A . . . . . . 160180 GTTATTTTCTTTCATTTAGAAATAGAAAACCCCCCTTTTTATCATTTTTGCTTTCCAAGA V I F F H L E I E N P P F Y H F C F P R L F S F I - K - K T P L F I I F A F Q E S Y F L S F R N R K P P F L S F L L S K . . . . . 160120 AAGCAATTGACTGAACAGTAGTAATAATAGACTGAAGTTAGTCT K Q L T E Q - - - - T E V S S N - L N S S N N R L K L V K A I D - T V V I I D - S - S Maximal non-overlapping open reading frames (>= 64 codons): none AGS-2 (161417 160650) SCR (e 0.835) Exon 1 161417 160650 ( 768 n); score: 0.835 PGS (161417 160650) SGN-E349968+ 3-phase translation of AGS-2 (-strand): . . . . . . 161417 GCCCGTGACGGTCCGTAGGTGGCATCGTAGTGCAGCTGCTGAAGGAAGATGGGGAAGTCT A R D G P - V A S - C S C - R K M G K S P V T V R R W H R S A A A E G R W G S L P - R S V G G I V V Q L L K E D G E V . . . . . . 161357 GACAAAGTGTGGGGTTACGGAGTGCGTGACATACCGTCATAGCCATGACGGTCCGTCCTG D K V W G Y G V R D I P S - P - R S V L T K C G V T E C V T Y R H S H D G P S C - Q S V G L R S A - H T V I A M T V R P . . . . . . 161297 CTAGTTTGTCATGAAGATCAGAGAAGTAGTCGTAGTACCCAAATTCCAAGAGTTCAAGTG L V C H E D Q R S S R S T Q I P R V Q V - F V M K I R E V V V V P K F Q E F K C A S L S - R S E K - S - Y P N S K S S S . . . . . . 161237 TTTTGGAGCGGAGACCCTTGACGGACCGTTGTTCCTGTGACGATCCATCATACCTGCCGT F W S G D P - R T V V P V T I H H T C R F G A E T L D G P L F L - R S I I P A V V L E R R P L T D R C S C D D P S Y L P . . . . . . 161177 CGAGGGTAATGAAGAGAGCAACACAATAAATTGCACAAGTTTGGGACGACGGAGTCCATG R G - - R E Q H N K L H K F G T T E S M E G N E E S N T I N C T S L G R R S P - S R V M K R A T Q - I A Q V W D D G V H . . . . . . 161117 ACGGTCCATCGTGACCACGACGATCCGTCGCGAGGTCCGTCGATCCAACCACATTTTGAC T V H R D H D D P S R G P S I Q P H F D R S I V T T T I R R E V R R S N H I L T D G P S - P R R S V A R S V D P T T F - . . . . . . 161057 AGATTTCCAGCAAATAGAGTCCTAATTTAATTAGGTTTTAATTTTTTATAAATAGTTTGA R F P A N R V L I - L G F N F L - I V - D F Q Q I E S - F N - V L I F Y K - F E Q I S S K - S P N L I R F - F F I N S L . . . . . . 160997 AAAACCTCATTTTTGAGGTTAGACCCTTGATTGTTTTTAGACTCTTTGTTAGACTCTTGA K T S F L R L D P - L F L D S L L D S - K P H F - G - T L D C F - T L C - T L D K N L I F E V R P L I V F R L F V R L L . . . . . . 160937 TTTTTGAGCTTCTTTTGTGGATTAGACTTGAGGATTATTGTTACACTTATGGAGAATCTT F L S F F C G L D L R I I V T L M E N L F - A S F V D - T - G L L L H L W R I F I F E L L L W I R L E D Y C Y T Y G E S . . . . . . 160877 TGTTCTTCAATTAATTTCAGTAATTGATGTAATTGATTGTTGGTGATTTTTGGTGATTAA C S S I N F S N - C N - L L V I F G D - V L Q L I S V I D V I D C W - F L V I N L F F N - F Q - L M - L I V G D F W - L . . . . . . 160817 TCAAGTGAACTTTCGGATTTTACTCTTTCTCATTGAAGTAAGTGCATGAATTCTTATATC S S E L S D F T L S H - S K C M N S Y I Q V N F R I L L F L I E V S A - I L I S I K - T F G F Y S F S L K - V H E F L Y . . . . . . 160757 ATATATTTGAATATTGTGATTATGACTATGGGCAACTAAACTCCATAACTAGGGTTGTGG I Y L N I V I M T M G N - T P - L G L W Y I - I L - L - L W A T K L H N - G C G H I F E Y C D Y D Y G Q L N S I T R V V . . . . . 160697 GAACCATAGCCGAATAATTGTGTAAAACCTAACTAAAATAACAATTCT E P - P N N C V K P N - N N N S N H S R I I V - N L T K I T I G T I A E - L C K T - L K - Q F Maximal non-overlapping open reading frames (>= 64 codons): none 3-phase translation of AGS-2 (+strand): . . . . . . 160650 AGAATTGTTATTTTAGTTAGGTTTTACACAATTATTCGGCTATGGTTCCCACAACCCTAG R I V I L V R F Y T I I R L W F P Q P - E L L F - L G F T Q L F G Y G S H N P S N C Y F S - V L H N Y S A M V P T T L . . . . . . 160710 TTATGGAGTTTAGTTGCCCATAGTCATAATCACAATATTCAAATATATGATATAAGAATT L W S L V A H S H N H N I Q I Y D I R I Y G V - L P I V I I T I F K Y M I - E F V M E F S C P - S - S Q Y S N I - Y K N . . . . . . 160770 CATGCACTTACTTCAATGAGAAAGAGTAAAATCCGAAAGTTCACTTGATTAATCACCAAA H A L T S M R K S K I R K F T - L I T K M H L L Q - E R V K S E S S L D - S P K S C T Y F N E K E - N P K V H L I N H Q . . . . . . 160830 AATCACCAACAATCAATTACATCAATTACTGAAATTAATTGAAGAACAAAGATTCTCCAT N H Q Q S I T S I T E I N - R T K I L H I T N N Q L H Q L L K L I E E Q R F S I K S P T I N Y I N Y - N - L K N K D S P . . . . . . 160890 AAGTGTAACAATAATCCTCAAGTCTAATCCACAAAAGAAGCTCAAAAATCAAGAGTCTAA K C N N N P Q V - S T K E A Q K S R V - S V T I I L K S N P Q K K L K N Q E S N - V - Q - S S S L I H K R S S K I K S L . . . . . . 160950 CAAAGAGTCTAAAAACAATCAAGGGTCTAACCTCAAAAATGAGGTTTTTCAAACTATTTA Q R V - K Q S R V - P Q K - G F S N Y L K E S K N N Q G S N L K N E V F Q T I Y T K S L K T I K G L T S K M R F F K L F . . . . . . 161010 TAAAAAATTAAAACCTAATTAAATTAGGACTCTATTTGCTGGAAATCTGTCAAAATGTGG - K I K T - L N - D S I C W K S V K M W K K L K P N - I R T L F A G N L S K C G I K N - N L I K L G L Y L L E I C Q N V . . . . . . 161070 TTGGATCGACGGACCTCGCGACGGATCGTCGTGGTCACGATGGACCGTCATGGACTCCGT L D R R T S R R I V V V T M D R H G L R W I D G P R D G S S W S R W T V M D S V V G S T D L A T D R R G H D G P S W T P . . . . . . 161130 CGTCCCAAACTTGTGCAATTTATTGTGTTGCTCTCTTCATTACCCTCGACGGCAGGTATG R P K L V Q F I V L L S S L P S T A G M V P N L C N L L C C S L H Y P R R Q V - S S Q T C A I Y C V A L F I T L D G R Y . . . . . . 161190 ATGGATCGTCACAGGAACAACGGTCCGTCAAGGGTCTCCGCTCCAAAACACTTGAACTCT M D R H R N N G P S R V S A P K H L N S W I V T G T T V R Q G S P L Q N T - T L D G S S Q E Q R S V K G L R S K T L E L . . . . . . 161250 TGGAATTTGGGTACTACGACTACTTCTCTGATCTTCATGACAAACTAGCAGGACGGACCG W N L G T T T T S L I F M T N - Q D G P G I W V L R L L L - S S - Q T S R T D R L E F G Y Y D Y F S D L H D K L A G R T . . . . . . 161310 TCATGGCTATGACGGTATGTCACGCACTCCGTAACCCCACACTTTGTCAGACTTCCCCAT S W L - R Y V T H S V T P H F V R L P H H G Y D G M S R T P - P H T L S D F P I V M A M T V C H A L R N P T L C Q T S P . . . . . 161370 CTTCCTTCAGCAGCTGCACTACGATGCCACCTACGGACCGTCACGGGC L P S A A A L R C H L R T V T G F L Q Q L H Y D A T Y G P S R S S F S S C T T M P P T D R H G Maximal non-overlapping open reading frames (>= 64 codons): >C10HBa0115K16.1+_PGL-23_AGS-2_PPS_1 (161021 161416) (frame '0'; 396 bp, 132 residues) 1 NLIKLGLYLL EICQNVVGST DLATDRRGHD GPSWTPSSQT CAIYCVALFI TLDGRYDGSS 61 QEQRSVKGLR SKTLELLEFG YYDYFSDLHD KLAGRTVMAM TVCHALRNPT LCQTSPSSFS 121 SCTTMPPTDR HG >C10HBa0115K16.1+_PGL-23_AGS-2_PPS_2 (160822 161031) (frame '2'; 207 bp, 69 residues) 1 SPKITNNQLH QLLKLIEEQR FSISVTIILK SNPQKKLKNQ ESNKESKNNQ GSNLKNEVFQ 61 TIYKKLKPN- AGS-3 (161502 161260,161209 160922,160869 160781) SCR (e 0.868 d 0.000 a 0.000,e 0.776 d 0.000 a 0.000,e 0.730) Exon 1 161502 161260 ( 243 n); score: 0.868 Intron 1 161259 161210 ( 50 n); Pd: 0.000 Pa: 0.000 Exon 2 161209 160922 ( 288 n); score: 0.776 Intron 2 160921 160870 ( 52 n); Pd: 0.000 Pa: 0.000 Exon 3 160869 160781 ( 89 n); score: 0.730 PGS (161502 161260,161209 160922,160869 160781) SGN-E546250- PGS (161502 161260,161209 161155) SGN-E546251+ 3-phase translation of AGS-3 (-strand): . . . . . . 161502 AAATCTATCTAAAAGATGAATACGGAGGTTTTTGAGTGAGAAATATAGAAAAGTACCACC K S I - K M N T E V F E - E I - K S T T N L S K R - I R R F L S E K Y R K V P P I Y L K D E Y G G F - V R N I E K Y H . . . . . . 161442 TACGGAGCTTGTGACGGTTCGTCATGCCCGTGACGGTCCGTAGGTGGCATCGTAGTGCAG Y G A C D G S S C P - R S V G G I V V Q T E L V T V R H A R D G P - V A S - C S L R S L - R F V M P V T V R R W H R S A . . . . . . 161382 CTGCTGAAGGAAGATGGGGAAGTCTGACAAAGTGTGGGGTTACGGAGTGCGTGACATACC L L K E D G E V - Q S V G L R S A - H T C - R K M G K S D K V W G Y G V R D I P A A E G R W G S L T K C G V T E C V T Y . . . . . . 161322 GTCATAGCCATGACGGTCCGTCCTGCTAGTTTGTCATGAAGATCAGAGAAGTAGTCGTAG V I A M T V R P A S L S - R S E K - S - S - P - R S V L L V C H E D Q R S S R S R H S H D G P S C - F V M K I R E V V V . : . . . . . 161262 TAC : TTGTTCCTGTGACGATCCATCATACCTGCCGTCGAGGGTAATGAAGAGAGCAACACA Y : L F L - R S I I P A V E G N E E S N T T : C S C D D P S Y L P S R V M K R A T Q V : L V P V T I H H T C R R G - - R E Q H . . . . . . 161152 ATAAATTGCACAAGTTTGGGACGACGGAGTCCATGACGGTCCATCGTGACCACGACGATC I N C T S L G R R S P - R S I V T T T I - I A Q V W D D G V H D G P S - P R R S N K L H K F G T T E S M T V H R D H D D . . . . . . 161092 CGTCGCGAGGTCCGTCGATCCAACCACATTTTGACAGATTTCCAGCAAATAGAGTCCTAA R R E V R R S N H I L T D F Q Q I E S - V A R S V D P T T F - Q I S S K - S P N P S R G P S I Q P H F D R F P A N R V L . . . . . . 161032 TTTAATTAGGTTTTAATTTTTTATAAATAGTTTGAAAAACCTCATTTTTGAGGTTAGACC F N - V L I F Y K - F E K P H F - G - T L I R F - F F I N S L K N L I F E V R P I - L G F N F L - I V - K T S F L R L D . . . . . . : 160972 CTTGATTGTTTTTAGACTCTTTGTTAGACTCTTGATTTTTGAGCTTCTTTT : AATTAATTT L D C F - T L C - T L D F - A S F : N - F L I V F R L F V R L L I F E L L L : I N F P - L F L D S L L D S - F L S F F : - L I . . . . . . 160860 CAGTAATTGATGTAATTGATTGTTGGTGATTTTTGGTGATTAATCAAGTGAACTTTCGGA Q - L M - L I V G D F W - L I K - T F G S N - C N - L L V I F G D - S S E L S D S V I D V I D C W - F L V I N Q V N F R . . 160800 TTTTACTCTTTCTCATTGAA F Y S F S L F T L S H - I L L F L I E Maximal non-overlapping open reading frames (>= 64 codons): none AGS-4 (161414 160981,160949 160851) SCR (e 0.880 d 0.000 a 0.000,e 0.864) Exon 1 161414 160981 ( 434 n); score: 0.880 Intron 1 160980 160950 ( 31 n); Pd: 0.000 Pa: 0.000 Exon 2 160949 160851 ( 99 n); score: 0.864 PGS (161414 160981,160949 160851) SGN-E306489+ 3-phase translation of AGS-4 (-strand): . . . . . . 161414 CGTGACGGTCCGTAGGTGGCATCGTAGTGCAGCTGCTGAAGGAAGATGGGGAAGTCTGAC R D G P - V A S - C S C - R K M G K S D V T V R R W H R S A A A E G R W G S L T - R S V G G I V V Q L L K E D G E V - . . . . . . 161354 AAAGTGTGGGGTTACGGAGTGCGTGACATACCGTCATAGCCATGACGGTCCGTCCTGCTA K V W G Y G V R D I P S - P - R S V L L K C G V T E C V T Y R H S H D G P S C - Q S V G L R S A - H T V I A M T V R P A . . . . . . 161294 GTTTGTCATGAAGATCAGAGAAGTAGTCGTAGTACCCAAATTCCAAGAGTTCAAGTGTTT V C H E D Q R S S R S T Q I P R V Q V F F V M K I R E V V V V P K F Q E F K C F S L S - R S E K - S - Y P N S K S S S V . . . . . . 161234 TGGAGCGGAGACCCTTGACGGACCGTTGTTCCTGTGACGATCCATCATACCTGCCGTCGA W S G D P - R T V V P V T I H H T C R R G A E T L D G P L F L - R S I I P A V E L E R R P L T D R C S C D D P S Y L P S . . . . . . 161174 GGGTAATGAAGAGAGCAACACAATAAATTGCACAAGTTTGGGACGACGGAGTCCATGACG G - - R E Q H N K L H K F G T T E S M T G N E E S N T I N C T S L G R R S P - R R V M K R A T Q - I A Q V W D D G V H D . . . . . . 161114 GTCCATCGTGACCACGACGATCCGTCGCGAGGTCCGTCGATCCAACCACATTTTGACAGA V H R D H D D P S R G P S I Q P H F D R S I V T T T I R R E V R R S N H I L T D G P S - P R R S V A R S V D P T T F - Q . . . . . . 161054 TTTCCAGCAAATAGAGTCCTAATTTAATTAGGTTTTAATTTTTTATAAATAGTTTGAAAA F P A N R V L I - L G F N F L - I V - K F Q Q I E S - F N - V L I F Y K - F E K I S S K - S P N L I R F - F F I N S L K . . : . . . . 160994 ACCTCATTTTTGAG : TTAGACTCTTGATTTTTGAGCTTCTTTTGTGGATTAGACTTGAGGA T S F L S : - T L D F - A S F V D - T - G P H F - : V R L L I F E L L L W I R L E D N L I F E : L D S - F L S F F C G L D L R . . . . . . 160903 TTATTGTTACACTTATGGAGAATCTTTGTTCTTCAATTAATTTCAGTAATTGA L L L H L W R I F V L Q L I S V I Y C Y T Y G E S L F F N - F Q - L I I V T L M E N L C S S I N F S N - Maximal non-overlapping open reading frames (>= 64 codons): none AGS-5 (161502 160939,160902 160877) SCR (e 0.816 d 0.000 a 0.000,e 0.846) Exon 1 161502 160939 ( 564 n); score: 0.816 Intron 1 160938 160903 ( 36 n); Pd: 0.000 Pa: 0.000 Exon 2 160902 160877 ( 26 n); score: 0.846 PGS (161502 160939,160902 160877) SGN-E369291+ PGS (161502 160939,160902 160877) SGN-E369290- 3-phase translation of AGS-5 (-strand): . . . . . . 161502 AAATCTATCTAAAAGATGAATACGGAGGTTTTTGAGTGAGAAATATAGAAAAGTACCACC K S I - K M N T E V F E - E I - K S T T N L S K R - I R R F L S E K Y R K V P P I Y L K D E Y G G F - V R N I E K Y H . . . . . . 161442 TACGGAGCTTGTGACGGTTCGTCATGCCCGTGACGGTCCGTAGGTGGCATCGTAGTGCAG Y G A C D G S S C P - R S V G G I V V Q T E L V T V R H A R D G P - V A S - C S L R S L - R F V M P V T V R R W H R S A . . . . . . 161382 CTGCTGAAGGAAGATGGGGAAGTCTGACAAAGTGTGGGGTTACGGAGTGCGTGACATACC L L K E D G E V - Q S V G L R S A - H T C - R K M G K S D K V W G Y G V R D I P A A E G R W G S L T K C G V T E C V T Y . . . . . . 161322 GTCATAGCCATGACGGTCCGTCCTGCTAGTTTGTCATGAAGATCAGAGAAGTAGTCGTAG V I A M T V R P A S L S - R S E K - S - S - P - R S V L L V C H E D Q R S S R S R H S H D G P S C - F V M K I R E V V V . . . . . . 161262 TACCCAAATTCCAAGAGTTCAAGTGTTTTGGAGCGGAGACCCTTGACGGACCGTTGTTCC Y P N S K S S S V L E R R P L T D R C S T Q I P R V Q V F W S G D P - R T V V P V P K F Q E F K C F G A E T L D G P L F . . . . . . 161202 TGTGACGATCCATCATACCTGCCGTCGAGGGTAATGAAGAGAGCAACACAATAAATTGCA C D D P S Y L P S R V M K R A T Q - I A V T I H H T C R R G - - R E Q H N K L H L - R S I I P A V E G N E E S N T I N C . . . . . . 161142 CAAGTTTGGGACGACGGAGTCCATGACGGTCCATCGTGACCACGACGATCCGTCGCGAGG Q V W D D G V H D G P S - P R R S V A R K F G T T E S M T V H R D H D D P S R G T S L G R R S P - R S I V T T T I R R E . . . . . . 161082 TCCGTCGATCCAACCACATTTTGACAGATTTCCAGCAAATAGAGTCCTAATTTAATTAGG S V D P T T F - Q I S S K - S P N L I R P S I Q P H F D R F P A N R V L I - L G V R R S N H I L T D F Q Q I E S - F N - . . . . . . 161022 TTTTAATTTTTTATAAATAGTTTGAAAAACCTCATTTTTGAGGTTAGACCCTTGATTGTT F - F F I N S L K N L I F E V R P L I V F N F L - I V - K T S F L R L D P - L F V L I F Y K - F E K P H F - G - T L D C . . . : . . 160962 TTTAGACTCTTTGTTAGACTCTTG : TATTGTTACACTTATGGAGAATCTTT F R L F V R L L : Y C Y T Y G E S L D S L L D S C : I V T L M E N L F - T L C - T L : V L L H L W R I F Maximal non-overlapping open reading frames (>= 64 codons): none ... finished at: Tue Aug 29 01:18:14 2006