<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2008-04-10 00:07:43"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C12HBa0093P12-2lNi1/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/cxgn-bacpublish-resources-k0pWa0/sgn_ests_tomato_potato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-k0pWa0/sgn_ests_tomato_potato" ref_id="SGN-E559877" ref_strand="+" ref_description="SGN-E559877 [19444]">
      <seq>cataaagatcacagaaaaagttagaactcaagaacagtaacattgatttgtttacaataatttgtccgtttttatctatttgatcctcgccaaggactctccgatccattaatttcgtattttcatattgtttttcagcttatagggagatcaattacgaataatctaaagggtctttgcataaagatatgcaaaagacctcatttttgttgtaaactttattattttttcagtagtggggttgttcaatttcgtattttttttgtgggttttgaatttgggagatgggaaatatatttgtgaagaaaccgaagatcaccgaagttgataaagcgattttgtctttgaagactcaaaggcgtaagcttgctcaatatcagcaacagctggatgctgtaacttgaagctgagaaacaatgctgcatacaagacttgctacgcgaacacagaagaaagagagggcccttttagcattgaaaaagaagaaagtgcaagaagaactattaaagcaagttcgatgtttggctcataaatgttgagcaacaattggcagatattgaactgacaagcaagcaaaaggctgtctttgagagtttgaaaactgggaataatgcaatccaagcaatacaaggtgagatcaacctagaggatgttcaaaagtttaatggatgatacttgcaaggcaaaagcttatcaagacgaagtcaatgctattcttggagag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0093P12-2lNi1/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0093P12.2" temp_strand="-" temp_description="C12HBa0093P12.2  AC209662.1 htgs_phase:3 submitted_to_sgn_as:C12HBa0093P12 upload_account_name:italy">
        <position start="2727" stop="1"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="2427" g_stop="2038" g_length="390"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="386" r_length="386" r_score="0.910"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="2037" i_stop="446" i_length="1592">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="0.76"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="445" g_stop="293" g_length="153"/>
          <reference_exon_boundary r_type="cDNA" r_start="387" r_stop="546" r_length="160" r_score="0.882"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="292" i_stop="146" i_length="147">
            <donor d_prob="0.997" d_score="0.94"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="145" g_stop="1" g_length="145"/>
          <reference_exon_boundary r_type="cDNA" r_start="547" r_stop="692" r_length="146" r_score="0.945"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0093P12.2" gen_strand="-" ref_id="SGN-E559877" ref_strand="+">
        <total_alignment_score>0.911</total_alignment_score>
        <cumulative_length_of_scored_exons>688</cumulative_length_of_scored_exons>
        <coverage percentage="0.950" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0093P12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E559877" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="2427" e_stop="2038"/>
          <exon e_start="445" e_stop="293"/>
          <exon e_start="145" e_stop="1"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCTCAAAAAGATCAAAAAAGTTAGAACTCAAAGAACAAGTAACATTGATTTCTACACAATAATTTGTCTCTTTTTGTCTATTTGATCATCGCTGAGGACTCACCGATCCATTAATTTCGTATTTTCATATTGTTTTTTTCAGCTTATAAGGAGATCAATTACGAATAATCTAAAGGGTCTTTGCATATAGAGATGCAAAAGACCTCATTTTTGTTGTAAA-TTTTTTATTTTTT-TGTTGTGGGGTTGTTCAATTTCGTATTTTTTTTTTGTGGGTTTTGAATTTGGGAGATGGGAAATATATTTGTGAAGAAACCGAAGATCACCGAAGTTGATAGAGCGATTTTGTCTTTGAAGACTCAAAGGCGTAAGCTTGCTCAATATCAGCAACAGGTATAAGGAATTTTATTTTTGCCCCTTTTTGAAAATTTTGACTGCAGTTCTCTTTTTGGTGGGCTAAACTAAAATTGCTTAGTTTAGTTAAGATGGATCATGGGTAGTTTTTGGATTTTTTTTTCTGGGATTGGTTATTGTGGAGGATTATTAGGTGAAATTATGAAATTTGACAGCAAGATGGCTTTTTGGGTGTTTATTGCAATGCACAATTATAGCTCAACAATGATGTTAATACTAGATTTATAATGTTGAGATTGAGTTGTAGAACTATGTGTTTTTTCTTGAGTCTTTTAGCAATAACTATGTTTAGGAAGAATTAGTTCTCTATGTTGGTATTTGAGCCGAGGGTCAACCTCCCTACCTCCAAGGTTTCCTACCTCCAAGGTTGCTGGTAGGGGTAAGGTCTTCGTAGACTTTACCTTCACAGACTCTACTTTGTGGGATTACACGGGTGTGTTGTTGTTGTTATTATATGGCATGCGATGAGTTTAAGTGGAGTAAGATGATTAGTGAGGGTTATATAGCGGATCCCAACTTGTTTTTGTACTGAGGCATTGTTGTTATTGGTTCTTCCTTGACCATAACGTGATGCTTAGAGGAGCTGTGTATCAAAGTCTCTATATTTCTGAATGAATCGACCAGCTCTTCCAATTTGAGAAACAATAGCAACTGAACTTGGCAGTACCTAGAATATTTGTAAATTTTACAATACACATTACATATCCGTCATCTCAGTGGTCATTATGTAGGGGAGGAAGAGATGTCGACAGCTTGTTCTTACTTTCAACACATAAAAGATCTACTAGACGGTGGTTCTGATTTGAAAAAAAAAAATGTACGTTTCATACAAAGGTTTTCATTTTCTGTAGAAGTTTGAGTAAATACTGCTTCATATGATGCTGATGATAAGAAAAAGTGAGTCTTTGATGGAGCTTTTGTCTTCTGTAATTGCCATCCAAGGAAACAATAGTCAACTCTATTCCTGGATGAAAGAAATGACCTAATAGAGAGCTTTCGTTTCCTTTCTCCGAGTCAGAAAAGAGAATCTGTGAATTGTCTAAATCTTCAAAACCATATAGCCTAGATATAAGTTGACCTACCAATTCTACTTCTGAGCAATTACCTTCTATACAAGACCTCAAGTCTCAGCATCAACCATTACTTGAAATAATAGCACTTTGTTGCTTATATCATATTTTCTGTTAAAAATGAACCAAAAAAAAAAAGAAGGGGCATTCTCAGTTTCATTGCAACTGGACACGCAGCTAATTTTAATAGTTCGGGGAAGTTCTACAGGAGAGTGACCCATACCTTGATTATGCAGTTAGTCAGAATGCTAACAATCCCAACAAAATTGAAAAGTAATAAAAGAAAGAAAAACCCAAAATTGGGTAGAAGTTGGTTTTACATGAAGTAGGGGAAGTTTTTTGGAATTCTATTAAACGGTGCAACTGAGATTGTCCACAATAAGAACTTAAAGGTCCTCTCCTCTTTTTTTGGTGCCAAGGGCTCCACGTAGGACTGATTTGCAAGCTTTCCTCAATGTTGGTTTCAGACCTGCTAATCCCTTCTGTTATTCTTTGTTTCAGCTGGATGCTGTTA-TTGAAGCCGAAAAACAA-GCTGCA-A-AAGACTTGCTACGCGAA-A-AGAAGAAAGAGAGGGCCCTTTTAGCATTGAAAAAGAAGAAAGTGCAAGAAGAACTATTAAAGCAAGTT-GATGTTTGGCTCATAAATGTTGAGCAGCAAGTAAGTAATTCTTCTTAATTCAGTTCCATACTTATGCTACCATGCTAAATTTCCTTATTTCTCTTAAGCATATGCTACCATGCTAAATTTCCTTATTTCTCTTAAGCATTTAAATTGTTTTCTGATTCTATTTGCAAATTCTTTTAGTTGGCAGATATTGAACTGACAAGCAAGCAAAAGGCTGTCTTTGAGAGTTTGAAAACTGGGAATAATGCAATCAAAGCAATACAAGGTGAGATCAATCTAGAGGATGTTCAAAAG-TTAATGGATGATACTGCAGAGGCAAAAGCTT</genome_strand>
        <mrna_strand>CATAAAGATCACAGAAAAAGTTAGAACTC-AAGAACA-GTAACATTGATTTGTTTACAATAATTTGTCCGTTTTTATCTATTTGATCCTCGCCAAGGACTCTCCGATCCATTAATTTCGTATTTTCATATTG--TTTTTCAGCTTATAGGGAGATCAATTACGAATAATCTAAAGGGTCTTTGCATAAAGATATGCAAAAGACCTCATTTTTGTTGTAAACTTTATTATTTTTTCAGTAGTGGGGTTGTTCAATTTCGTA--TTTTTTTTGTGGGTTTTGAATTTGGGAGATGGGAAATATATTTGTGAAGAAACCGAAGATCACCGAAGTTGATAAAGCGATTTTGTCTTTGAAGACTCAAAGGCGTAAGCTTGCTCAATATCAGCAACAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGATGCTGTAACTTGAAGCTGAGAAACAATGCTGCATACAAGACTTGCTACGCGAACACAGAAGAAAGAGAGGGCCCTTTTAGCATTGAAAAAGAAGAAAGTGCAAGAAGAACTATTAAAGCAAGTTCGATGTTTGGCTCATAAATGTTGAGCAACAA...................................................................................................................................................TTGGCAGATATTGAACTGACAAGCAAGCAAAAGGCTGTCTTTGAGAGTTTGAAAACTGGGAATAATGCAATCCAAGCAATACAAGGTGAGATCAACCTAGAGGATGTTCAAAAGTTTAATGGATGATACTTGCAAGGCAAAAGCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-k0pWa0/sgn_ests_tomato_potato" ref_id="SGN-E622402" ref_strand="+" ref_description="SGN-E622402 [72769]">
      <seq>caaagaaaaagttagaactcaagaacagtaacattgatttgtttacaataatttgtccgtttttatctatttgatcctcgccaaggactctccgatccattaatttcgtattttcatattgttttttcagcttatagggagatcaattacgaataatctaaagggtctttgcataaagatatgcaaaagacctcatttttgttgtaaatttattatttttttgttgtggggttgttcaatttcgtattttttttgtgggttttgaatttgggagatgggaaatatatttgtgaagaaaccgaagatcaccgaagttgataaagcgattttgtctttgaagactcaaaggcgtaagcttgctcaatatcagcaacagctggatgctgtaattgaagctgagaaacaagctgcaaaagacttgctacgcgaaaagaagaaagagagggcccttttagcattgaaaaagaagaaagtgcaagaagaactattaaagcaagttgatgtttggctcataaatgttgagcaacaattggcagatattgaactgacaagcaagcaaaaggctgtctttgagagtttgaaaactgggaataatgcaatcaaagcaatacaaggtgagatcaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0093P12-2lNi1/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0093P12.2" temp_strand="-" temp_description="C12HBa0093P12.2  AC209662.1 htgs_phase:3 submitted_to_sgn_as:C12HBa0093P12 upload_account_name:italy">
        <position start="2713" stop="1"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="2418" g_stop="2038" g_length="381"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="376" r_length="376" r_score="0.937"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="2037" i_stop="446" i_length="1592">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="445" g_stop="293" g_length="153"/>
          <reference_exon_boundary r_type="cDNA" r_start="377" r_stop="529" r_length="153" r_score="0.974"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="292" i_stop="146" i_length="147">
            <donor d_prob="0.997" d_score="0.98"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="145" g_stop="50" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="530" r_stop="625" r_length="96" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0093P12.2" gen_strand="-" ref_id="SGN-E622402" ref_strand="+">
        <total_alignment_score>0.954</total_alignment_score>
        <cumulative_length_of_scored_exons>630</cumulative_length_of_scored_exons>
        <coverage percentage="1.008" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0093P12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E622402" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="2418" e_stop="2038"/>
          <exon e_start="445" e_stop="293"/>
          <exon e_start="145" e_stop="50"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATCAAAAAAGTTAGAACTCAAAGAACAAGTAACATTGATTTCTACACAATAATTTGTCTCTTTTTGTCTATTTGATCATCGCTGAGGACTCACCGATCCATTAATTTCGTATTTTCATATTGTTTTTTTCAGCTTATAAGGAGATCAATTACGAATAATCTAAAGGGTCTTTGCATATAGAGATGCAAAAGACCTCATTTTTGTTGTAAATTTTTTATTTTTTTGTTGTGGGGTTGTTCAATTTCGTATTTTTTTTTTGTGGGTTTTGAATTTGGGAGATGGGAAATATATTTGTGAAGAAACCGAAGATCACCGAAGTTGATAGAGCGATTTTGTCTTTGAAGACTCAAAGGCGTAAGCTTGCTCAATATCAGCAACAGGTATAAGGAATTTTATTTTTGCCCCTTTTTGAAAATTTTGACTGCAGTTCTCTTTTTGGTGGGCTAAACTAAAATTGCTTAGTTTAGTTAAGATGGATCATGGGTAGTTTTTGGATTTTTTTTTCTGGGATTGGTTATTGTGGAGGATTATTAGGTGAAATTATGAAATTTGACAGCAAGATGGCTTTTTGGGTGTTTATTGCAATGCACAATTATAGCTCAACAATGATGTTAATACTAGATTTATAATGTTGAGATTGAGTTGTAGAACTATGTGTTTTTTCTTGAGTCTTTTAGCAATAACTATGTTTAGGAAGAATTAGTTCTCTATGTTGGTATTTGAGCCGAGGGTCAACCTCCCTACCTCCAAGGTTTCCTACCTCCAAGGTTGCTGGTAGGGGTAAGGTCTTCGTAGACTTTACCTTCACAGACTCTACTTTGTGGGATTACACGGGTGTGTTGTTGTTGTTATTATATGGCATGCGATGAGTTTAAGTGGAGTAAGATGATTAGTGAGGGTTATATAGCGGATCCCAACTTGTTTTTGTACTGAGGCATTGTTGTTATTGGTTCTTCCTTGACCATAACGTGATGCTTAGAGGAGCTGTGTATCAAAGTCTCTATATTTCTGAATGAATCGACCAGCTCTTCCAATTTGAGAAACAATAGCAACTGAACTTGGCAGTACCTAGAATATTTGTAAATTTTACAATACACATTACATATCCGTCATCTCAGTGGTCATTATGTAGGGGAGGAAGAGATGTCGACAGCTTGTTCTTACTTTCAACACATAAAAGATCTACTAGACGGTGGTTCTGATTTGAAAAAAAAAAATGTACGTTTCATACAAAGGTTTTCATTTTCTGTAGAAGTTTGAGTAAATACTGCTTCATATGATGCTGATGATAAGAAAAAGTGAGTCTTTGATGGAGCTTTTGTCTTCTGTAATTGCCATCCAAGGAAACAATAGTCAACTCTATTCCTGGATGAAAGAAATGACCTAATAGAGAGCTTTCGTTTCCTTTCTCCGAGTCAGAAAAGAGAATCTGTGAATTGTCTAAATCTTCAAAACCATATAGCCTAGATATAAGTTGACCTACCAATTCTACTTCTGAGCAATTACCTTCTATACAAGACCTCAAGTCTCAGCATCAACCATTACTTGAAATAATAGCACTTTGTTGCTTATATCATATTTTCTGTTAAAAATGAACCAAAAAAAAAAAGAAGGGGCATTCTCAGTTTCATTGCAACTGGACACGCAGCTAATTTTAATAGTTCGGGGAAGTTCTACAGGAGAGTGACCCATACCTTGATTATGCAGTTAGTCAGAATGCTAACAATCCCAACAAAATTGAAAAGTAATAAAAGAAAGAAAAACCCAAAATTGGGTAGAAGTTGGTTTTACATGAAGTAGGGGAAGTTTTTTGGAATTCTATTAAACGGTGCAACTGAGATTGTCCACAATAAGAACTTAAAGGTCCTCTCCTCTTTTTTTGGTGCCAAGGGCTCCACGTAGGACTGATTTGCAAGCTTTCCTCAATGTTGGTTTCAGACCTGCTAATCCCTTCTGTTATTCTTTGTTTCAGCTGGATGCTGTTATTGAAGCCGAAAAACAAGCTGCAAAAGACTTGCTACGCGAAAAGAAGAAAGAGAGGGCCCTTTTAGCATTGAAAAAGAAGAAAGTGCAAGAAGAACTATTAAAGCAAGTTGATGTTTGGCTCATAAATGTTGAGCAGCAAGTAAGTAATTCTTCTTAATTCAGTTCCATACTTATGCTACCATGCTAAATTTCCTTATTTCTCTTAAGCATATGCTACCATGCTAAATTTCCTTATTTCTCTTAAGCATTTAAATTGTTTTCTGATTCTATTTGCAAATTCTTTTAGTTGGCAGATATTGAACTGACAAGCAAGCAAAAGGCTGTCTTTGAGAGTTTGAAAACTGGGAATAATGCAATCAAAGCAATACAAGGTGAGATCAAT</genome_strand>
        <mrna_strand>CAAAGAAAAAGTTAGAACTC-AAGAAC-AGTAACATTGATTTGTTTACAATAATTTGTCCGTTTTTATCTATTTGATCCTCGCCAAGGACTCTCCGATCCATTAATTTCGTATTTTCATATTG-TTTTTTCAGCTTATAGGGAGATCAATTACGAATAATCTAAAGGGTCTTTGCATAAAGATATGCAAAAGACCTCATTTTTGTTGTAAATTTATTATTTTTTTGTTGTGGGGTTGTTCAATTTCGTA--TTTTTTTTGTGGGTTTTGAATTTGGGAGATGGGAAATATATTTGTGAAGAAACCGAAGATCACCGAAGTTGATAAAGCGATTTTGTCTTTGAAGACTCAAAGGCGTAAGCTTGCTCAATATCAGCAACAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGATGCTGTAATTGAAGCTGAGAAACAAGCTGCAAAAGACTTGCTACGCGAAAAGAAGAAAGAGAGGGCCCTTTTAGCATTGAAAAAGAAGAAAGTGCAAGAAGAACTATTAAAGCAAGTTGATGTTTGGCTCATAAATGTTGAGCAACAA...................................................................................................................................................TTGGCAGATATTGAACTGACAAGCAAGCAAAAGGCTGTCTTTGAGAGTTTGAAAACTGGGAATAATGCAATCAAAGCAATACAAGGTGAGATCAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-k0pWa0/sgn_ests_tomato_potato" ref_id="SGN-E395668" ref_strand="+" ref_description="SGN-E395668 [TUS-17-G22]">
      <seq>aaaagatcaaaaaagttagaactcaaagaacaagtaacattgatttctacacaataatttgtctctttttgtctatttgatcatcgctgaggactcaccgatccattaatttcgtattttcatattgtttttttcagcttataaggagatcaattacgaataatctaaagggtctttgcatatagagatgcaaaagacctcatttttgttgtaaattttttatttttttgttgtggggttgttcaatttcgtattttttttttgtgggttttgaatttgggagatgggaaatatatttgtgaagaaaccgaagatcaccgaagttgatagagcgattttgtctttgaagactcaaaggcgtaagcttgctcaatatcagcaacagctggatgctgttattgaagccgaaaaacaagctgcaaaagacttgctacgcgaaaagaagaaagagagggcccttttagcattgaaaaagaagaaagtgcaagaagaactattaaagcaagttgatgtttggctcataaatgttgagcagcaattggcagatattgaactgacaagcaagcaaaaggctgtctttgagagtttgaaaactgggaataatgcaatcaaagcaata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0093P12-2lNi1/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0093P12.2" temp_strand="-" temp_description="C12HBa0093P12.2  AC209662.1 htgs_phase:3 submitted_to_sgn_as:C12HBa0093P12 upload_account_name:italy">
        <position start="2722" stop="1"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="2422" g_stop="2038" g_length="385"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="385" r_length="385" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="2037" i_stop="446" i_length="1592">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="445" g_stop="293" g_length="153"/>
          <reference_exon_boundary r_type="cDNA" r_start="386" r_stop="538" r_length="153" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="292" i_stop="146" i_length="147">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="145" g_stop="65" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="539" r_stop="619" r_length="81" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0093P12.2" gen_strand="-" ref_id="SGN-E395668" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>619</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0093P12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E395668" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="2422" e_stop="2038"/>
          <exon e_start="445" e_stop="293"/>
          <exon e_start="145" e_stop="65"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAGATCAAAAAAGTTAGAACTCAAAGAACAAGTAACATTGATTTCTACACAATAATTTGTCTCTTTTTGTCTATTTGATCATCGCTGAGGACTCACCGATCCATTAATTTCGTATTTTCATATTGTTTTTTTCAGCTTATAAGGAGATCAATTACGAATAATCTAAAGGGTCTTTGCATATAGAGATGCAAAAGACCTCATTTTTGTTGTAAATTTTTTATTTTTTTGTTGTGGGGTTGTTCAATTTCGTATTTTTTTTTTGTGGGTTTTGAATTTGGGAGATGGGAAATATATTTGTGAAGAAACCGAAGATCACCGAAGTTGATAGAGCGATTTTGTCTTTGAAGACTCAAAGGCGTAAGCTTGCTCAATATCAGCAACAGGTATAAGGAATTTTATTTTTGCCCCTTTTTGAAAATTTTGACTGCAGTTCTCTTTTTGGTGGGCTAAACTAAAATTGCTTAGTTTAGTTAAGATGGATCATGGGTAGTTTTTGGATTTTTTTTTCTGGGATTGGTTATTGTGGAGGATTATTAGGTGAAATTATGAAATTTGACAGCAAGATGGCTTTTTGGGTGTTTATTGCAATGCACAATTATAGCTCAACAATGATGTTAATACTAGATTTATAATGTTGAGATTGAGTTGTAGAACTATGTGTTTTTTCTTGAGTCTTTTAGCAATAACTATGTTTAGGAAGAATTAGTTCTCTATGTTGGTATTTGAGCCGAGGGTCAACCTCCCTACCTCCAAGGTTTCCTACCTCCAAGGTTGCTGGTAGGGGTAAGGTCTTCGTAGACTTTACCTTCACAGACTCTACTTTGTGGGATTACACGGGTGTGTTGTTGTTGTTATTATATGGCATGCGATGAGTTTAAGTGGAGTAAGATGATTAGTGAGGGTTATATAGCGGATCCCAACTTGTTTTTGTACTGAGGCATTGTTGTTATTGGTTCTTCCTTGACCATAACGTGATGCTTAGAGGAGCTGTGTATCAAAGTCTCTATATTTCTGAATGAATCGACCAGCTCTTCCAATTTGAGAAACAATAGCAACTGAACTTGGCAGTACCTAGAATATTTGTAAATTTTACAATACACATTACATATCCGTCATCTCAGTGGTCATTATGTAGGGGAGGAAGAGATGTCGACAGCTTGTTCTTACTTTCAACACATAAAAGATCTACTAGACGGTGGTTCTGATTTGAAAAAAAAAAATGTACGTTTCATACAAAGGTTTTCATTTTCTGTAGAAGTTTGAGTAAATACTGCTTCATATGATGCTGATGATAAGAAAAAGTGAGTCTTTGATGGAGCTTTTGTCTTCTGTAATTGCCATCCAAGGAAACAATAGTCAACTCTATTCCTGGATGAAAGAAATGACCTAATAGAGAGCTTTCGTTTCCTTTCTCCGAGTCAGAAAAGAGAATCTGTGAATTGTCTAAATCTTCAAAACCATATAGCCTAGATATAAGTTGACCTACCAATTCTACTTCTGAGCAATTACCTTCTATACAAGACCTCAAGTCTCAGCATCAACCATTACTTGAAATAATAGCACTTTGTTGCTTATATCATATTTTCTGTTAAAAATGAACCAAAAAAAAAAAGAAGGGGCATTCTCAGTTTCATTGCAACTGGACACGCAGCTAATTTTAATAGTTCGGGGAAGTTCTACAGGAGAGTGACCCATACCTTGATTATGCAGTTAGTCAGAATGCTAACAATCCCAACAAAATTGAAAAGTAATAAAAGAAAGAAAAACCCAAAATTGGGTAGAAGTTGGTTTTACATGAAGTAGGGGAAGTTTTTTGGAATTCTATTAAACGGTGCAACTGAGATTGTCCACAATAAGAACTTAAAGGTCCTCTCCTCTTTTTTTGGTGCCAAGGGCTCCACGTAGGACTGATTTGCAAGCTTTCCTCAATGTTGGTTTCAGACCTGCTAATCCCTTCTGTTATTCTTTGTTTCAGCTGGATGCTGTTATTGAAGCCGAAAAACAAGCTGCAAAAGACTTGCTACGCGAAAAGAAGAAAGAGAGGGCCCTTTTAGCATTGAAAAAGAAGAAAGTGCAAGAAGAACTATTAAAGCAAGTTGATGTTTGGCTCATAAATGTTGAGCAGCAAGTAAGTAATTCTTCTTAATTCAGTTCCATACTTATGCTACCATGCTAAATTTCCTTATTTCTCTTAAGCATATGCTACCATGCTAAATTTCCTTATTTCTCTTAAGCATTTAAATTGTTTTCTGATTCTATTTGCAAATTCTTTTAGTTGGCAGATATTGAACTGACAAGCAAGCAAAAGGCTGTCTTTGAGAGTTTGAAAACTGGGAATAATGCAATCAAAGCAATA</genome_strand>
        <mrna_strand>AAAAGATCAAAAAAGTTAGAACTCAAAGAACAAGTAACATTGATTTCTACACAATAATTTGTCTCTTTTTGTCTATTTGATCATCGCTGAGGACTCACCGATCCATTAATTTCGTATTTTCATATTGTTTTTTTCAGCTTATAAGGAGATCAATTACGAATAATCTAAAGGGTCTTTGCATATAGAGATGCAAAAGACCTCATTTTTGTTGTAAATTTTTTATTTTTTTGTTGTGGGGTTGTTCAATTTCGTATTTTTTTTTTGTGGGTTTTGAATTTGGGAGATGGGAAATATATTTGTGAAGAAACCGAAGATCACCGAAGTTGATAGAGCGATTTTGTCTTTGAAGACTCAAAGGCGTAAGCTTGCTCAATATCAGCAACAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGATGCTGTTATTGAAGCCGAAAAACAAGCTGCAAAAGACTTGCTACGCGAAAAGAAGAAAGAGAGGGCCCTTTTAGCATTGAAAAAGAAGAAAGTGCAAGAAGAACTATTAAAGCAAGTTGATGTTTGGCTCATAAATGTTGAGCAGCAA...................................................................................................................................................TTGGCAGATATTGAACTGACAAGCAAGCAAAAGGCTGTCTTTGAGAGTTTGAAAACTGGGAATAATGCAATCAAAGCAATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-k0pWa0/sgn_ests_tomato_potato" ref_id="SGN-E318076" ref_strand="+" ref_description="SGN-E318076 [cTOA-29-E22]">
      <seq>aaagatcaaaaaagttagaactcaaagaacaagtaacattgatttctacacaataatttgtctctttttgtctatttgatcatcgctgaggactcaccgatccattaatttcgtattttcatattgtttttttcagcttataaggagatcaattacgaataatctaaagggtctttgcatatagagatgcaaaagacctcatttttgttgtaaattttttatttttttgttgtggggttgttcaatttcgtattttttttttgtgggttttgaatttgggagatgggaaatatatttgtgaagaaaccgaagatcaccgaagttgatagagcgattttgtctttgaagactcaaaggcgtaagcttgctcaatatcaacaacagctggatgctgttattgaagccgaaaaacaagctgcaaaagacttgctacgcgaaaagaagaaagagagggcccttttagcattgaaaaagaagaaagtgcaagaagaactattaaagcaagttgatgtttggctcataaatgttgagcagcaattggcagatattgaactgacaagcaagcaaaatgctgtctttgagagtttgaatactgggaataatgcaatcaaagcaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0093P12-2lNi1/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0093P12.2" temp_strand="-" temp_description="C12HBa0093P12.2  AC209662.1 htgs_phase:3 submitted_to_sgn_as:C12HBa0093P12 upload_account_name:italy">
        <position start="2721" stop="1"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="2421" g_stop="2038" g_length="384"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="384" r_length="384" r_score="0.997"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="2037" i_stop="446" i_length="1592">
            <donor d_prob="0.984" d_score="0.98"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="445" g_stop="293" g_length="153"/>
          <reference_exon_boundary r_type="cDNA" r_start="385" r_stop="537" r_length="153" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="292" i_stop="146" i_length="147">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="145" g_stop="66" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="538" r_stop="617" r_length="80" r_score="0.975"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0093P12.2" gen_strand="-" ref_id="SGN-E318076" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>617</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0093P12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E318076" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="2421" e_stop="2038"/>
          <exon e_start="445" e_stop="293"/>
          <exon e_start="145" e_stop="66"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAGATCAAAAAAGTTAGAACTCAAAGAACAAGTAACATTGATTTCTACACAATAATTTGTCTCTTTTTGTCTATTTGATCATCGCTGAGGACTCACCGATCCATTAATTTCGTATTTTCATATTGTTTTTTTCAGCTTATAAGGAGATCAATTACGAATAATCTAAAGGGTCTTTGCATATAGAGATGCAAAAGACCTCATTTTTGTTGTAAATTTTTTATTTTTTTGTTGTGGGGTTGTTCAATTTCGTATTTTTTTTTTGTGGGTTTTGAATTTGGGAGATGGGAAATATATTTGTGAAGAAACCGAAGATCACCGAAGTTGATAGAGCGATTTTGTCTTTGAAGACTCAAAGGCGTAAGCTTGCTCAATATCAGCAACAGGTATAAGGAATTTTATTTTTGCCCCTTTTTGAAAATTTTGACTGCAGTTCTCTTTTTGGTGGGCTAAACTAAAATTGCTTAGTTTAGTTAAGATGGATCATGGGTAGTTTTTGGATTTTTTTTTCTGGGATTGGTTATTGTGGAGGATTATTAGGTGAAATTATGAAATTTGACAGCAAGATGGCTTTTTGGGTGTTTATTGCAATGCACAATTATAGCTCAACAATGATGTTAATACTAGATTTATAATGTTGAGATTGAGTTGTAGAACTATGTGTTTTTTCTTGAGTCTTTTAGCAATAACTATGTTTAGGAAGAATTAGTTCTCTATGTTGGTATTTGAGCCGAGGGTCAACCTCCCTACCTCCAAGGTTTCCTACCTCCAAGGTTGCTGGTAGGGGTAAGGTCTTCGTAGACTTTACCTTCACAGACTCTACTTTGTGGGATTACACGGGTGTGTTGTTGTTGTTATTATATGGCATGCGATGAGTTTAAGTGGAGTAAGATGATTAGTGAGGGTTATATAGCGGATCCCAACTTGTTTTTGTACTGAGGCATTGTTGTTATTGGTTCTTCCTTGACCATAACGTGATGCTTAGAGGAGCTGTGTATCAAAGTCTCTATATTTCTGAATGAATCGACCAGCTCTTCCAATTTGAGAAACAATAGCAACTGAACTTGGCAGTACCTAGAATATTTGTAAATTTTACAATACACATTACATATCCGTCATCTCAGTGGTCATTATGTAGGGGAGGAAGAGATGTCGACAGCTTGTTCTTACTTTCAACACATAAAAGATCTACTAGACGGTGGTTCTGATTTGAAAAAAAAAAATGTACGTTTCATACAAAGGTTTTCATTTTCTGTAGAAGTTTGAGTAAATACTGCTTCATATGATGCTGATGATAAGAAAAAGTGAGTCTTTGATGGAGCTTTTGTCTTCTGTAATTGCCATCCAAGGAAACAATAGTCAACTCTATTCCTGGATGAAAGAAATGACCTAATAGAGAGCTTTCGTTTCCTTTCTCCGAGTCAGAAAAGAGAATCTGTGAATTGTCTAAATCTTCAAAACCATATAGCCTAGATATAAGTTGACCTACCAATTCTACTTCTGAGCAATTACCTTCTATACAAGACCTCAAGTCTCAGCATCAACCATTACTTGAAATAATAGCACTTTGTTGCTTATATCATATTTTCTGTTAAAAATGAACCAAAAAAAAAAAGAAGGGGCATTCTCAGTTTCATTGCAACTGGACACGCAGCTAATTTTAATAGTTCGGGGAAGTTCTACAGGAGAGTGACCCATACCTTGATTATGCAGTTAGTCAGAATGCTAACAATCCCAACAAAATTGAAAAGTAATAAAAGAAAGAAAAACCCAAAATTGGGTAGAAGTTGGTTTTACATGAAGTAGGGGAAGTTTTTTGGAATTCTATTAAACGGTGCAACTGAGATTGTCCACAATAAGAACTTAAAGGTCCTCTCCTCTTTTTTTGGTGCCAAGGGCTCCACGTAGGACTGATTTGCAAGCTTTCCTCAATGTTGGTTTCAGACCTGCTAATCCCTTCTGTTATTCTTTGTTTCAGCTGGATGCTGTTATTGAAGCCGAAAAACAAGCTGCAAAAGACTTGCTACGCGAAAAGAAGAAAGAGAGGGCCCTTTTAGCATTGAAAAAGAAGAAAGTGCAAGAAGAACTATTAAAGCAAGTTGATGTTTGGCTCATAAATGTTGAGCAGCAAGTAAGTAATTCTTCTTAATTCAGTTCCATACTTATGCTACCATGCTAAATTTCCTTATTTCTCTTAAGCATATGCTACCATGCTAAATTTCCTTATTTCTCTTAAGCATTTAAATTGTTTTCTGATTCTATTTGCAAATTCTTTTAGTTGGCAGATATTGAACTGACAAGCAAGCAAAAGGCTGTCTTTGAGAGTTTGAAAACTGGGAATAATGCAATCAAAGCAAT</genome_strand>
        <mrna_strand>AAAGATCAAAAAAGTTAGAACTCAAAGAACAAGTAACATTGATTTCTACACAATAATTTGTCTCTTTTTGTCTATTTGATCATCGCTGAGGACTCACCGATCCATTAATTTCGTATTTTCATATTGTTTTTTTCAGCTTATAAGGAGATCAATTACGAATAATCTAAAGGGTCTTTGCATATAGAGATGCAAAAGACCTCATTTTTGTTGTAAATTTTTTATTTTTTTGTTGTGGGGTTGTTCAATTTCGTATTTTTTTTTTGTGGGTTTTGAATTTGGGAGATGGGAAATATATTTGTGAAGAAACCGAAGATCACCGAAGTTGATAGAGCGATTTTGTCTTTGAAGACTCAAAGGCGTAAGCTTGCTCAATATCAACAACAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGATGCTGTTATTGAAGCCGAAAAACAAGCTGCAAAAGACTTGCTACGCGAAAAGAAGAAAGAGAGGGCCCTTTTAGCATTGAAAAAGAAGAAAGTGCAAGAAGAACTATTAAAGCAAGTTGATGTTTGGCTCATAAATGTTGAGCAGCAA...................................................................................................................................................TTGGCAGATATTGAACTGACAAGCAAGCAAAATGCTGTCTTTGAGAGTTTGAATACTGGGAATAATGCAATCAAAGCAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-k0pWa0/sgn_ests_tomato_potato" ref_id="SGN-E306854" ref_strand="+" ref_description="SGN-E306854 [cLEY-11-B2]">
      <seq>atcaaaaaagttagaactcaaagaacaagtaacattgattgctacacaataatttgtctctttttgtctatttgatcatcgctgaggactcaccgatccattaatttcgtattttcatattgtttttttcagcttataaggagatcaattacgaataatctaaagggtctttgcatatagagatgcaaaagacctcatttttgttgtaaattttttatttttttgttgtggggttgttcaatttcgtattttttttttgtgggttttgaatttgggagatgggaaatatatttgtgaagaaaccgaagatcaccgaagttgatagagcgattttgtctttgaagactcaaaggcgtaagcttgctcaatatcagcaacagctggatgctgttattgaagccgaaaaacaagctgcaaaagacttgctacgcgaaaagaagaaagagagggcccttttagcattgaaaaagaagaaagtgcaagaagaactattaaagcaagttgatgtttggctcataaatgttgagcagcaattggcagatattgaactgacaagcaagcaaaaggctgtctttgagagtttgaaaactgggaataatgcaatcaaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0093P12-2lNi1/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0093P12.2" temp_strand="-" temp_description="C12HBa0093P12.2  AC209662.1 htgs_phase:3 submitted_to_sgn_as:C12HBa0093P12 upload_account_name:italy">
        <position start="2717" stop="1"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="2417" g_stop="2038" g_length="380"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="380" r_length="380" r_score="0.997"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="2037" i_stop="446" i_length="1592">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="445" g_stop="293" g_length="153"/>
          <reference_exon_boundary r_type="cDNA" r_start="381" r_stop="533" r_length="153" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="292" i_stop="146" i_length="147">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="145" g_stop="71" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="534" r_stop="608" r_length="75" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0093P12.2" gen_strand="-" ref_id="SGN-E306854" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>608</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0093P12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E306854" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="2417" e_stop="2038"/>
          <exon e_start="445" e_stop="293"/>
          <exon e_start="145" e_stop="71"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCAAAAAAGTTAGAACTCAAAGAACAAGTAACATTGATTTCTACACAATAATTTGTCTCTTTTTGTCTATTTGATCATCGCTGAGGACTCACCGATCCATTAATTTCGTATTTTCATATTGTTTTTTTCAGCTTATAAGGAGATCAATTACGAATAATCTAAAGGGTCTTTGCATATAGAGATGCAAAAGACCTCATTTTTGTTGTAAATTTTTTATTTTTTTGTTGTGGGGTTGTTCAATTTCGTATTTTTTTTTTGTGGGTTTTGAATTTGGGAGATGGGAAATATATTTGTGAAGAAACCGAAGATCACCGAAGTTGATAGAGCGATTTTGTCTTTGAAGACTCAAAGGCGTAAGCTTGCTCAATATCAGCAACAGGTATAAGGAATTTTATTTTTGCCCCTTTTTGAAAATTTTGACTGCAGTTCTCTTTTTGGTGGGCTAAACTAAAATTGCTTAGTTTAGTTAAGATGGATCATGGGTAGTTTTTGGATTTTTTTTTCTGGGATTGGTTATTGTGGAGGATTATTAGGTGAAATTATGAAATTTGACAGCAAGATGGCTTTTTGGGTGTTTATTGCAATGCACAATTATAGCTCAACAATGATGTTAATACTAGATTTATAATGTTGAGATTGAGTTGTAGAACTATGTGTTTTTTCTTGAGTCTTTTAGCAATAACTATGTTTAGGAAGAATTAGTTCTCTATGTTGGTATTTGAGCCGAGGGTCAACCTCCCTACCTCCAAGGTTTCCTACCTCCAAGGTTGCTGGTAGGGGTAAGGTCTTCGTAGACTTTACCTTCACAGACTCTACTTTGTGGGATTACACGGGTGTGTTGTTGTTGTTATTATATGGCATGCGATGAGTTTAAGTGGAGTAAGATGATTAGTGAGGGTTATATAGCGGATCCCAACTTGTTTTTGTACTGAGGCATTGTTGTTATTGGTTCTTCCTTGACCATAACGTGATGCTTAGAGGAGCTGTGTATCAAAGTCTCTATATTTCTGAATGAATCGACCAGCTCTTCCAATTTGAGAAACAATAGCAACTGAACTTGGCAGTACCTAGAATATTTGTAAATTTTACAATACACATTACATATCCGTCATCTCAGTGGTCATTATGTAGGGGAGGAAGAGATGTCGACAGCTTGTTCTTACTTTCAACACATAAAAGATCTACTAGACGGTGGTTCTGATTTGAAAAAAAAAAATGTACGTTTCATACAAAGGTTTTCATTTTCTGTAGAAGTTTGAGTAAATACTGCTTCATATGATGCTGATGATAAGAAAAAGTGAGTCTTTGATGGAGCTTTTGTCTTCTGTAATTGCCATCCAAGGAAACAATAGTCAACTCTATTCCTGGATGAAAGAAATGACCTAATAGAGAGCTTTCGTTTCCTTTCTCCGAGTCAGAAAAGAGAATCTGTGAATTGTCTAAATCTTCAAAACCATATAGCCTAGATATAAGTTGACCTACCAATTCTACTTCTGAGCAATTACCTTCTATACAAGACCTCAAGTCTCAGCATCAACCATTACTTGAAATAATAGCACTTTGTTGCTTATATCATATTTTCTGTTAAAAATGAACCAAAAAAAAAAAGAAGGGGCATTCTCAGTTTCATTGCAACTGGACACGCAGCTAATTTTAATAGTTCGGGGAAGTTCTACAGGAGAGTGACCCATACCTTGATTATGCAGTTAGTCAGAATGCTAACAATCCCAACAAAATTGAAAAGTAATAAAAGAAAGAAAAACCCAAAATTGGGTAGAAGTTGGTTTTACATGAAGTAGGGGAAGTTTTTTGGAATTCTATTAAACGGTGCAACTGAGATTGTCCACAATAAGAACTTAAAGGTCCTCTCCTCTTTTTTTGGTGCCAAGGGCTCCACGTAGGACTGATTTGCAAGCTTTCCTCAATGTTGGTTTCAGACCTGCTAATCCCTTCTGTTATTCTTTGTTTCAGCTGGATGCTGTTATTGAAGCCGAAAAACAAGCTGCAAAAGACTTGCTACGCGAAAAGAAGAAAGAGAGGGCCCTTTTAGCATTGAAAAAGAAGAAAGTGCAAGAAGAACTATTAAAGCAAGTTGATGTTTGGCTCATAAATGTTGAGCAGCAAGTAAGTAATTCTTCTTAATTCAGTTCCATACTTATGCTACCATGCTAAATTTCCTTATTTCTCTTAAGCATATGCTACCATGCTAAATTTCCTTATTTCTCTTAAGCATTTAAATTGTTTTCTGATTCTATTTGCAAATTCTTTTAGTTGGCAGATATTGAACTGACAAGCAAGCAAAAGGCTGTCTTTGAGAGTTTGAAAACTGGGAATAATGCAATCAAA</genome_strand>
        <mrna_strand>ATCAAAAAAGTTAGAACTCAAAGAACAAGTAACATTGATTGCTACACAATAATTTGTCTCTTTTTGTCTATTTGATCATCGCTGAGGACTCACCGATCCATTAATTTCGTATTTTCATATTGTTTTTTTCAGCTTATAAGGAGATCAATTACGAATAATCTAAAGGGTCTTTGCATATAGAGATGCAAAAGACCTCATTTTTGTTGTAAATTTTTTATTTTTTTGTTGTGGGGTTGTTCAATTTCGTATTTTTTTTTTGTGGGTTTTGAATTTGGGAGATGGGAAATATATTTGTGAAGAAACCGAAGATCACCGAAGTTGATAGAGCGATTTTGTCTTTGAAGACTCAAAGGCGTAAGCTTGCTCAATATCAGCAACAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGATGCTGTTATTGAAGCCGAAAAACAAGCTGCAAAAGACTTGCTACGCGAAAAGAAGAAAGAGAGGGCCCTTTTAGCATTGAAAAAGAAGAAAGTGCAAGAAGAACTATTAAAGCAAGTTGATGTTTGGCTCATAAATGTTGAGCAGCAA...................................................................................................................................................TTGGCAGATATTGAACTGACAAGCAAGCAAAAGGCTGTCTTTGAGAGTTTGAAAACTGGGAATAATGCAATCAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-k0pWa0/sgn_ests_tomato_potato" ref_id="SGN-E321151" ref_strand="+" ref_description="SGN-E321151 [cTOB-13-F17]">
      <seq>tttgcatatagagatgcaaaagacctcatttttgttgtaaattttttatttttttgttgtggggttgttcaatttcgtattttttttttgtgggttttgaatttgggagatgggaaatatatttgtgaagaaaccgaagatcaccgaagttgatagagcgattttgtctttgaagactcaaaggcgtaagcttgctcaatatcagcaacagctggatgctgttattgaagccgaaaaacaagctgcaaaagacttgctacgcgaaaagaagaaagagagggcccttttagcattgaaaaagaagaaagtgcaagaagaactattaaagcaagttgatgtttggctcataaatgttgagcagcaattggcagatattgaactgacaagcaagcaaaaggctgtctttgagagtttgaaaact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0093P12-2lNi1/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0093P12.2" temp_strand="-" temp_description="C12HBa0093P12.2  AC209662.1 htgs_phase:3 submitted_to_sgn_as:C12HBa0093P12 upload_account_name:italy">
        <position start="2548" stop="1"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="2248" g_stop="2038" g_length="211"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="211" r_length="211" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="2037" i_stop="446" i_length="1592">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="445" g_stop="293" g_length="153"/>
          <reference_exon_boundary r_type="cDNA" r_start="212" r_stop="364" r_length="153" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="292" i_stop="146" i_length="147">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="145" g_stop="89" g_length="57"/>
          <reference_exon_boundary r_type="cDNA" r_start="365" r_stop="421" r_length="57" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0093P12.2" gen_strand="-" ref_id="SGN-E321151" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>421</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0093P12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E321151" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="2248" e_stop="2038"/>
          <exon e_start="445" e_stop="293"/>
          <exon e_start="145" e_stop="89"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTGCATATAGAGATGCAAAAGACCTCATTTTTGTTGTAAATTTTTTATTTTTTTGTTGTGGGGTTGTTCAATTTCGTATTTTTTTTTTGTGGGTTTTGAATTTGGGAGATGGGAAATATATTTGTGAAGAAACCGAAGATCACCGAAGTTGATAGAGCGATTTTGTCTTTGAAGACTCAAAGGCGTAAGCTTGCTCAATATCAGCAACAGGTATAAGGAATTTTATTTTTGCCCCTTTTTGAAAATTTTGACTGCAGTTCTCTTTTTGGTGGGCTAAACTAAAATTGCTTAGTTTAGTTAAGATGGATCATGGGTAGTTTTTGGATTTTTTTTTCTGGGATTGGTTATTGTGGAGGATTATTAGGTGAAATTATGAAATTTGACAGCAAGATGGCTTTTTGGGTGTTTATTGCAATGCACAATTATAGCTCAACAATGATGTTAATACTAGATTTATAATGTTGAGATTGAGTTGTAGAACTATGTGTTTTTTCTTGAGTCTTTTAGCAATAACTATGTTTAGGAAGAATTAGTTCTCTATGTTGGTATTTGAGCCGAGGGTCAACCTCCCTACCTCCAAGGTTTCCTACCTCCAAGGTTGCTGGTAGGGGTAAGGTCTTCGTAGACTTTACCTTCACAGACTCTACTTTGTGGGATTACACGGGTGTGTTGTTGTTGTTATTATATGGCATGCGATGAGTTTAAGTGGAGTAAGATGATTAGTGAGGGTTATATAGCGGATCCCAACTTGTTTTTGTACTGAGGCATTGTTGTTATTGGTTCTTCCTTGACCATAACGTGATGCTTAGAGGAGCTGTGTATCAAAGTCTCTATATTTCTGAATGAATCGACCAGCTCTTCCAATTTGAGAAACAATAGCAACTGAACTTGGCAGTACCTAGAATATTTGTAAATTTTACAATACACATTACATATCCGTCATCTCAGTGGTCATTATGTAGGGGAGGAAGAGATGTCGACAGCTTGTTCTTACTTTCAACACATAAAAGATCTACTAGACGGTGGTTCTGATTTGAAAAAAAAAAATGTACGTTTCATACAAAGGTTTTCATTTTCTGTAGAAGTTTGAGTAAATACTGCTTCATATGATGCTGATGATAAGAAAAAGTGAGTCTTTGATGGAGCTTTTGTCTTCTGTAATTGCCATCCAAGGAAACAATAGTCAACTCTATTCCTGGATGAAAGAAATGACCTAATAGAGAGCTTTCGTTTCCTTTCTCCGAGTCAGAAAAGAGAATCTGTGAATTGTCTAAATCTTCAAAACCATATAGCCTAGATATAAGTTGACCTACCAATTCTACTTCTGAGCAATTACCTTCTATACAAGACCTCAAGTCTCAGCATCAACCATTACTTGAAATAATAGCACTTTGTTGCTTATATCATATTTTCTGTTAAAAATGAACCAAAAAAAAAAAGAAGGGGCATTCTCAGTTTCATTGCAACTGGACACGCAGCTAATTTTAATAGTTCGGGGAAGTTCTACAGGAGAGTGACCCATACCTTGATTATGCAGTTAGTCAGAATGCTAACAATCCCAACAAAATTGAAAAGTAATAAAAGAAAGAAAAACCCAAAATTGGGTAGAAGTTGGTTTTACATGAAGTAGGGGAAGTTTTTTGGAATTCTATTAAACGGTGCAACTGAGATTGTCCACAATAAGAACTTAAAGGTCCTCTCCTCTTTTTTTGGTGCCAAGGGCTCCACGTAGGACTGATTTGCAAGCTTTCCTCAATGTTGGTTTCAGACCTGCTAATCCCTTCTGTTATTCTTTGTTTCAGCTGGATGCTGTTATTGAAGCCGAAAAACAAGCTGCAAAAGACTTGCTACGCGAAAAGAAGAAAGAGAGGGCCCTTTTAGCATTGAAAAAGAAGAAAGTGCAAGAAGAACTATTAAAGCAAGTTGATGTTTGGCTCATAAATGTTGAGCAGCAAGTAAGTAATTCTTCTTAATTCAGTTCCATACTTATGCTACCATGCTAAATTTCCTTATTTCTCTTAAGCATATGCTACCATGCTAAATTTCCTTATTTCTCTTAAGCATTTAAATTGTTTTCTGATTCTATTTGCAAATTCTTTTAGTTGGCAGATATTGAACTGACAAGCAAGCAAAAGGCTGTCTTTGAGAGTTTGAAAACT</genome_strand>
        <mrna_strand>TTTGCATATAGAGATGCAAAAGACCTCATTTTTGTTGTAAATTTTTTATTTTTTTGTTGTGGGGTTGTTCAATTTCGTATTTTTTTTTTGTGGGTTTTGAATTTGGGAGATGGGAAATATATTTGTGAAGAAACCGAAGATCACCGAAGTTGATAGAGCGATTTTGTCTTTGAAGACTCAAAGGCGTAAGCTTGCTCAATATCAGCAACAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGATGCTGTTATTGAAGCCGAAAAACAAGCTGCAAAAGACTTGCTACGCGAAAAGAAGAAAGAGAGGGCCCTTTTAGCATTGAAAAAGAAGAAAGTGCAAGAAGAACTATTAAAGCAAGTTGATGTTTGGCTCATAAATGTTGAGCAGCAA...................................................................................................................................................TTGGCAGATATTGAACTGACAAGCAAGCAAAAGGCTGTCTTTGAGAGTTTGAAAACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-k0pWa0/sgn_ests_tomato_potato" ref_id="SGN-E210308" ref_strand="+" ref_description="SGN-E210308 [cLEC-35-G16]">
      <seq>aaagatcaaaaaagttagaactcaaagaacaagtaacattgatttctacacaataatttgtctctttttgtctatttgatcatcgctgaggactcaccgatccattaatttcgtattttcatattgtttttttcagcttataaggagatcaattacgaataatctaaagggtctttgcatatagagatgcaaaagacctcatttttgttgtaaattttttatttttttgttgtggggttgttcaatttcgtattttttttttgtgggttttgaatttgggagatgggaaatatatttgtgaagaaaccgaagatcaccgaagttgatagagcgattttgtctttgaagactcaaaggcgtaagcttgctcaatatcagcaacagctggatgctgttattgaagccgaaaaacaagctgcaaaagacttgctacgcgaaaagaagaaagagagggcccttttagcattgaaaaagaagaaagtgcaagaagaactattaaagcaagttgatgtttggctcataaatgttgagcagcaattggcagatattgaactgacaagcaagca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0093P12-2lNi1/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0093P12.2" temp_strand="-" temp_description="C12HBa0093P12.2  AC209662.1 htgs_phase:3 submitted_to_sgn_as:C12HBa0093P12 upload_account_name:italy">
        <position start="2721" stop="1"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="2421" g_stop="2038" g_length="384"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="384" r_length="384" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="2037" i_stop="446" i_length="1592">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="445" g_stop="293" g_length="153"/>
          <reference_exon_boundary r_type="cDNA" r_start="385" r_stop="537" r_length="153" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="292" i_stop="146" i_length="147">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="145" g_stop="117" g_length="29"/>
          <reference_exon_boundary r_type="cDNA" r_start="538" r_stop="566" r_length="29" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0093P12.2" gen_strand="-" ref_id="SGN-E210308" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>566</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0093P12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E210308" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="2421" e_stop="2038"/>
          <exon e_start="445" e_stop="293"/>
          <exon e_start="145" e_stop="117"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAGATCAAAAAAGTTAGAACTCAAAGAACAAGTAACATTGATTTCTACACAATAATTTGTCTCTTTTTGTCTATTTGATCATCGCTGAGGACTCACCGATCCATTAATTTCGTATTTTCATATTGTTTTTTTCAGCTTATAAGGAGATCAATTACGAATAATCTAAAGGGTCTTTGCATATAGAGATGCAAAAGACCTCATTTTTGTTGTAAATTTTTTATTTTTTTGTTGTGGGGTTGTTCAATTTCGTATTTTTTTTTTGTGGGTTTTGAATTTGGGAGATGGGAAATATATTTGTGAAGAAACCGAAGATCACCGAAGTTGATAGAGCGATTTTGTCTTTGAAGACTCAAAGGCGTAAGCTTGCTCAATATCAGCAACAGGTATAAGGAATTTTATTTTTGCCCCTTTTTGAAAATTTTGACTGCAGTTCTCTTTTTGGTGGGCTAAACTAAAATTGCTTAGTTTAGTTAAGATGGATCATGGGTAGTTTTTGGATTTTTTTTTCTGGGATTGGTTATTGTGGAGGATTATTAGGTGAAATTATGAAATTTGACAGCAAGATGGCTTTTTGGGTGTTTATTGCAATGCACAATTATAGCTCAACAATGATGTTAATACTAGATTTATAATGTTGAGATTGAGTTGTAGAACTATGTGTTTTTTCTTGAGTCTTTTAGCAATAACTATGTTTAGGAAGAATTAGTTCTCTATGTTGGTATTTGAGCCGAGGGTCAACCTCCCTACCTCCAAGGTTTCCTACCTCCAAGGTTGCTGGTAGGGGTAAGGTCTTCGTAGACTTTACCTTCACAGACTCTACTTTGTGGGATTACACGGGTGTGTTGTTGTTGTTATTATATGGCATGCGATGAGTTTAAGTGGAGTAAGATGATTAGTGAGGGTTATATAGCGGATCCCAACTTGTTTTTGTACTGAGGCATTGTTGTTATTGGTTCTTCCTTGACCATAACGTGATGCTTAGAGGAGCTGTGTATCAAAGTCTCTATATTTCTGAATGAATCGACCAGCTCTTCCAATTTGAGAAACAATAGCAACTGAACTTGGCAGTACCTAGAATATTTGTAAATTTTACAATACACATTACATATCCGTCATCTCAGTGGTCATTATGTAGGGGAGGAAGAGATGTCGACAGCTTGTTCTTACTTTCAACACATAAAAGATCTACTAGACGGTGGTTCTGATTTGAAAAAAAAAAATGTACGTTTCATACAAAGGTTTTCATTTTCTGTAGAAGTTTGAGTAAATACTGCTTCATATGATGCTGATGATAAGAAAAAGTGAGTCTTTGATGGAGCTTTTGTCTTCTGTAATTGCCATCCAAGGAAACAATAGTCAACTCTATTCCTGGATGAAAGAAATGACCTAATAGAGAGCTTTCGTTTCCTTTCTCCGAGTCAGAAAAGAGAATCTGTGAATTGTCTAAATCTTCAAAACCATATAGCCTAGATATAAGTTGACCTACCAATTCTACTTCTGAGCAATTACCTTCTATACAAGACCTCAAGTCTCAGCATCAACCATTACTTGAAATAATAGCACTTTGTTGCTTATATCATATTTTCTGTTAAAAATGAACCAAAAAAAAAAAGAAGGGGCATTCTCAGTTTCATTGCAACTGGACACGCAGCTAATTTTAATAGTTCGGGGAAGTTCTACAGGAGAGTGACCCATACCTTGATTATGCAGTTAGTCAGAATGCTAACAATCCCAACAAAATTGAAAAGTAATAAAAGAAAGAAAAACCCAAAATTGGGTAGAAGTTGGTTTTACATGAAGTAGGGGAAGTTTTTTGGAATTCTATTAAACGGTGCAACTGAGATTGTCCACAATAAGAACTTAAAGGTCCTCTCCTCTTTTTTTGGTGCCAAGGGCTCCACGTAGGACTGATTTGCAAGCTTTCCTCAATGTTGGTTTCAGACCTGCTAATCCCTTCTGTTATTCTTTGTTTCAGCTGGATGCTGTTATTGAAGCCGAAAAACAAGCTGCAAAAGACTTGCTACGCGAAAAGAAGAAAGAGAGGGCCCTTTTAGCATTGAAAAAGAAGAAAGTGCAAGAAGAACTATTAAAGCAAGTTGATGTTTGGCTCATAAATGTTGAGCAGCAAGTAAGTAATTCTTCTTAATTCAGTTCCATACTTATGCTACCATGCTAAATTTCCTTATTTCTCTTAAGCATATGCTACCATGCTAAATTTCCTTATTTCTCTTAAGCATTTAAATTGTTTTCTGATTCTATTTGCAAATTCTTTTAGTTGGCAGATATTGAACTGACAAGCAAGCA</genome_strand>
        <mrna_strand>AAAGATCAAAAAAGTTAGAACTCAAAGAACAAGTAACATTGATTTCTACACAATAATTTGTCTCTTTTTGTCTATTTGATCATCGCTGAGGACTCACCGATCCATTAATTTCGTATTTTCATATTGTTTTTTTCAGCTTATAAGGAGATCAATTACGAATAATCTAAAGGGTCTTTGCATATAGAGATGCAAAAGACCTCATTTTTGTTGTAAATTTTTTATTTTTTTGTTGTGGGGTTGTTCAATTTCGTATTTTTTTTTTGTGGGTTTTGAATTTGGGAGATGGGAAATATATTTGTGAAGAAACCGAAGATCACCGAAGTTGATAGAGCGATTTTGTCTTTGAAGACTCAAAGGCGTAAGCTTGCTCAATATCAGCAACAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGATGCTGTTATTGAAGCCGAAAAACAAGCTGCAAAAGACTTGCTACGCGAAAAGAAGAAAGAGAGGGCCCTTTTAGCATTGAAAAAGAAGAAAGTGCAAGAAGAACTATTAAAGCAAGTTGATGTTTGGCTCATAAATGTTGAGCAGCAA...................................................................................................................................................TTGGCAGATATTGAACTGACAAGCAAGCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-k0pWa0/sgn_ests_tomato_potato" ref_id="SGN-E287725" ref_strand="+" ref_description="SGN-E287725 [cLES-9-F24]">
      <seq>agttagaactcaaagaacaagtaacattgatttctacacaataatttgtctctttttgtctatttgatcatcgctgaggactcaccgatccattaatttcgtattttcatattgtttttttcagcttataaggagatcaattacgaataatctaaagggtctttgcatatagagatgcaaaagacctcatttttgttgtaaattttttatttttttgttgtggggttgttcaatttcgttttttttttgtgggttttgaatttgggagatgggaaatatatttgtgaagaaaccgaagatcaccgaagttgatagagcgattttgtctttgaagactcaaaggcgtaagcttgctcaatatcagcaacagctggatgctgttattgaagccgaaaaacaagctgcaaaagacttgctacgcgaaaagaagaaagagagggcccttttagcattgaaaaagaagaaagtgcaagaagaactattaaagcaagttgatgtttggctcataaatgttgag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0093P12-2lNi1/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0093P12.2" temp_strand="-" temp_description="C12HBa0093P12.2  AC209662.1 htgs_phase:3 submitted_to_sgn_as:C12HBa0093P12 upload_account_name:italy">
        <position start="2709" stop="1"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="2409" g_stop="2038" g_length="372"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="370" r_length="370" r_score="0.995"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="2037" i_stop="446" i_length="1592">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="445" g_stop="299" g_length="147"/>
          <reference_exon_boundary r_type="cDNA" r_start="371" r_stop="517" r_length="147" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0093P12.2" gen_strand="-" ref_id="SGN-E287725" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>519</cumulative_length_of_scored_exons>
        <coverage percentage="1.004" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0093P12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E287725" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="2409" e_stop="2038"/>
          <exon e_start="445" e_stop="299"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTTAGAACTCAAAGAACAAGTAACATTGATTTCTACACAATAATTTGTCTCTTTTTGTCTATTTGATCATCGCTGAGGACTCACCGATCCATTAATTTCGTATTTTCATATTGTTTTTTTCAGCTTATAAGGAGATCAATTACGAATAATCTAAAGGGTCTTTGCATATAGAGATGCAAAAGACCTCATTTTTGTTGTAAATTTTTTATTTTTTTGTTGTGGGGTTGTTCAATTTCGTATTTTTTTTTTGTGGGTTTTGAATTTGGGAGATGGGAAATATATTTGTGAAGAAACCGAAGATCACCGAAGTTGATAGAGCGATTTTGTCTTTGAAGACTCAAAGGCGTAAGCTTGCTCAATATCAGCAACAGGTATAAGGAATTTTATTTTTGCCCCTTTTTGAAAATTTTGACTGCAGTTCTCTTTTTGGTGGGCTAAACTAAAATTGCTTAGTTTAGTTAAGATGGATCATGGGTAGTTTTTGGATTTTTTTTTCTGGGATTGGTTATTGTGGAGGATTATTAGGTGAAATTATGAAATTTGACAGCAAGATGGCTTTTTGGGTGTTTATTGCAATGCACAATTATAGCTCAACAATGATGTTAATACTAGATTTATAATGTTGAGATTGAGTTGTAGAACTATGTGTTTTTTCTTGAGTCTTTTAGCAATAACTATGTTTAGGAAGAATTAGTTCTCTATGTTGGTATTTGAGCCGAGGGTCAACCTCCCTACCTCCAAGGTTTCCTACCTCCAAGGTTGCTGGTAGGGGTAAGGTCTTCGTAGACTTTACCTTCACAGACTCTACTTTGTGGGATTACACGGGTGTGTTGTTGTTGTTATTATATGGCATGCGATGAGTTTAAGTGGAGTAAGATGATTAGTGAGGGTTATATAGCGGATCCCAACTTGTTTTTGTACTGAGGCATTGTTGTTATTGGTTCTTCCTTGACCATAACGTGATGCTTAGAGGAGCTGTGTATCAAAGTCTCTATATTTCTGAATGAATCGACCAGCTCTTCCAATTTGAGAAACAATAGCAACTGAACTTGGCAGTACCTAGAATATTTGTAAATTTTACAATACACATTACATATCCGTCATCTCAGTGGTCATTATGTAGGGGAGGAAGAGATGTCGACAGCTTGTTCTTACTTTCAACACATAAAAGATCTACTAGACGGTGGTTCTGATTTGAAAAAAAAAAATGTACGTTTCATACAAAGGTTTTCATTTTCTGTAGAAGTTTGAGTAAATACTGCTTCATATGATGCTGATGATAAGAAAAAGTGAGTCTTTGATGGAGCTTTTGTCTTCTGTAATTGCCATCCAAGGAAACAATAGTCAACTCTATTCCTGGATGAAAGAAATGACCTAATAGAGAGCTTTCGTTTCCTTTCTCCGAGTCAGAAAAGAGAATCTGTGAATTGTCTAAATCTTCAAAACCATATAGCCTAGATATAAGTTGACCTACCAATTCTACTTCTGAGCAATTACCTTCTATACAAGACCTCAAGTCTCAGCATCAACCATTACTTGAAATAATAGCACTTTGTTGCTTATATCATATTTTCTGTTAAAAATGAACCAAAAAAAAAAAGAAGGGGCATTCTCAGTTTCATTGCAACTGGACACGCAGCTAATTTTAATAGTTCGGGGAAGTTCTACAGGAGAGTGACCCATACCTTGATTATGCAGTTAGTCAGAATGCTAACAATCCCAACAAAATTGAAAAGTAATAAAAGAAAGAAAAACCCAAAATTGGGTAGAAGTTGGTTTTACATGAAGTAGGGGAAGTTTTTTGGAATTCTATTAAACGGTGCAACTGAGATTGTCCACAATAAGAACTTAAAGGTCCTCTCCTCTTTTTTTGGTGCCAAGGGCTCCACGTAGGACTGATTTGCAAGCTTTCCTCAATGTTGGTTTCAGACCTGCTAATCCCTTCTGTTATTCTTTGTTTCAGCTGGATGCTGTTATTGAAGCCGAAAAACAAGCTGCAAAAGACTTGCTACGCGAAAAGAAGAAAGAGAGGGCCCTTTTAGCATTGAAAAAGAAGAAAGTGCAAGAAGAACTATTAAAGCAAGTTGATGTTTGGCTCATAAATGTTGAG</genome_strand>
        <mrna_strand>AGTTAGAACTCAAAGAACAAGTAACATTGATTTCTACACAATAATTTGTCTCTTTTTGTCTATTTGATCATCGCTGAGGACTCACCGATCCATTAATTTCGTATTTTCATATTGTTTTTTTCAGCTTATAAGGAGATCAATTACGAATAATCTAAAGGGTCTTTGCATATAGAGATGCAAAAGACCTCATTTTTGTTGTAAATTTTTTATTTTTTTGTTGTGGGGTTGTTCAATTTCG--TTTTTTTTTTGTGGGTTTTGAATTTGGGAGATGGGAAATATATTTGTGAAGAAACCGAAGATCACCGAAGTTGATAGAGCGATTTTGTCTTTGAAGACTCAAAGGCGTAAGCTTGCTCAATATCAGCAACAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGATGCTGTTATTGAAGCCGAAAAACAAGCTGCAAAAGACTTGCTACGCGAAAAGAAGAAAGAGAGGGCCCTTTTAGCATTGAAAAAGAAGAAAGTGCAAGAAGAACTATTAAAGCAAGTTGATGTTTGGCTCATAAATGTTGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-k0pWa0/sgn_ests_tomato_potato" ref_id="SGN-E250375" ref_strand="+" ref_description="SGN-E250375 [cLEG-6-C6]">
      <seq>ttttcagcttatgaggagatccatttcgaataatctaaagggtctttgcatatatagatgcaaaagacctcatttttgttgtaaattttttatttttttgttgtggggttgttcaatttcgcatttttttcttgtgggttttgaatttgggagatgggaaatatatttgtgaagaaaccgcagatcaccgaagttgatagagcgattgtgtctttgaagactcaaagagcgtaagctttgggccttcaatatcacaacagctggatgctgttattgaagccgaaaaacaagctgcaaaagacttgctacgcgaaaagaaaaaagagagggcccttttagcattgaaaaagaaaatagtgcaagaagaactattaaagcaaattgatgtttggctcataaatgttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0093P12-2lNi1/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0093P12.2" temp_strand="-" temp_description="C12HBa0093P12.2  AC209662.1 htgs_phase:3 submitted_to_sgn_as:C12HBa0093P12 upload_account_name:italy">
        <position start="2592" stop="1"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="2292" g_stop="2038" g_length="255"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="260" r_length="260" r_score="0.918"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="2037" i_stop="446" i_length="1592">
            <donor d_prob="0.984" d_score="0.70"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="445" g_stop="301" g_length="145"/>
          <reference_exon_boundary r_type="cDNA" r_start="261" r_stop="405" r_length="145" r_score="0.972"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0093P12.2" gen_strand="-" ref_id="SGN-E250375" ref_strand="+">
        <total_alignment_score>0.938</total_alignment_score>
        <cumulative_length_of_scored_exons>400</cumulative_length_of_scored_exons>
        <coverage percentage="0.988" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0093P12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E250375" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="2292" e_stop="2038"/>
          <exon e_start="445" e_stop="301"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTCAGCTTATAAGGAGATCAATTACGAATAATCTAAAGGGTCTTTGCATATAGAGATGCAAAAGACCTCATTTTTGTTGTAAATTTTTTATTTTTTTGTTGTGGGGTTGTTCAATTTCGTATTTTTTTTTTGTGGGTTTTGAATTTGGGAGATGGGAAATATATTTGTGAAGAAACCGAAGATCACCGAAGTTGATAGAGCGATTTTGTCTTTGAAGACTCAAAG-GCGTAAGC-TT--G-C-TCAATATCAGCAACAGGTATAAGGAATTTTATTTTTGCCCCTTTTTGAAAATTTTGACTGCAGTTCTCTTTTTGGTGGGCTAAACTAAAATTGCTTAGTTTAGTTAAGATGGATCATGGGTAGTTTTTGGATTTTTTTTTCTGGGATTGGTTATTGTGGAGGATTATTAGGTGAAATTATGAAATTTGACAGCAAGATGGCTTTTTGGGTGTTTATTGCAATGCACAATTATAGCTCAACAATGATGTTAATACTAGATTTATAATGTTGAGATTGAGTTGTAGAACTATGTGTTTTTTCTTGAGTCTTTTAGCAATAACTATGTTTAGGAAGAATTAGTTCTCTATGTTGGTATTTGAGCCGAGGGTCAACCTCCCTACCTCCAAGGTTTCCTACCTCCAAGGTTGCTGGTAGGGGTAAGGTCTTCGTAGACTTTACCTTCACAGACTCTACTTTGTGGGATTACACGGGTGTGTTGTTGTTGTTATTATATGGCATGCGATGAGTTTAAGTGGAGTAAGATGATTAGTGAGGGTTATATAGCGGATCCCAACTTGTTTTTGTACTGAGGCATTGTTGTTATTGGTTCTTCCTTGACCATAACGTGATGCTTAGAGGAGCTGTGTATCAAAGTCTCTATATTTCTGAATGAATCGACCAGCTCTTCCAATTTGAGAAACAATAGCAACTGAACTTGGCAGTACCTAGAATATTTGTAAATTTTACAATACACATTACATATCCGTCATCTCAGTGGTCATTATGTAGGGGAGGAAGAGATGTCGACAGCTTGTTCTTACTTTCAACACATAAAAGATCTACTAGACGGTGGTTCTGATTTGAAAAAAAAAAATGTACGTTTCATACAAAGGTTTTCATTTTCTGTAGAAGTTTGAGTAAATACTGCTTCATATGATGCTGATGATAAGAAAAAGTGAGTCTTTGATGGAGCTTTTGTCTTCTGTAATTGCCATCCAAGGAAACAATAGTCAACTCTATTCCTGGATGAAAGAAATGACCTAATAGAGAGCTTTCGTTTCCTTTCTCCGAGTCAGAAAAGAGAATCTGTGAATTGTCTAAATCTTCAAAACCATATAGCCTAGATATAAGTTGACCTACCAATTCTACTTCTGAGCAATTACCTTCTATACAAGACCTCAAGTCTCAGCATCAACCATTACTTGAAATAATAGCACTTTGTTGCTTATATCATATTTTCTGTTAAAAATGAACCAAAAAAAAAAAGAAGGGGCATTCTCAGTTTCATTGCAACTGGACACGCAGCTAATTTTAATAGTTCGGGGAAGTTCTACAGGAGAGTGACCCATACCTTGATTATGCAGTTAGTCAGAATGCTAACAATCCCAACAAAATTGAAAAGTAATAAAAGAAAGAAAAACCCAAAATTGGGTAGAAGTTGGTTTTACATGAAGTAGGGGAAGTTTTTTGGAATTCTATTAAACGGTGCAACTGAGATTGTCCACAATAAGAACTTAAAGGTCCTCTCCTCTTTTTTTGGTGCCAAGGGCTCCACGTAGGACTGATTTGCAAGCTTTCCTCAATGTTGGTTTCAGACCTGCTAATCCCTTCTGTTATTCTTTGTTTCAGCTGGATGCTGTTATTGAAGCCGAAAAACAAGCTGCAAAAGACTTGCTACGCGAAAAGAAGAAAGAGAGGGCCCTTTTAGCATTGAAAAAGAAGAAAGTGCAAGAAGAACTATTAAAGCAAGTTGATGTTTGGCTCATAAATGTTG</genome_strand>
        <mrna_strand>TTTTCAGCTTATGAGGAGATCCATTTCGAATAATCTAAAGGGTCTTTGCATATATAGATGCAAAAGACCTCATTTTTGTTGTAAATTTTTTATTTTTTTGTTGTGGGGTTGTTCAATTTCGCATTTTTTTCTTGTGGGTTTTGAATTTGGGAGATGGGAAATATATTTGTGAAGAAACCGCAGATCACCGAAGTTGATAGAGCGATTGTGTCTTTGAAGACTCAAAGAGCGTAAGCTTTGGGCCTTCAATATCA-CAACAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGATGCTGTTATTGAAGCCGAAAAACAAGCTGCAAAAGACTTGCTACGCGAAAAGAAAAAAGAGAGGGCCCTTTTAGCATTGAAAAAGAAAATAGTGCAAGAAGAACTATTAAAGCAAATTGATGTTTGGCTCATAAATGTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-k0pWa0/sgn_ests_tomato_potato" ref_id="SGN-E307480" ref_strand="+" ref_description="SGN-E307480 [cLEY-12-J4]">
      <seq>aaaagatcaaaaaagttagaactcaaagaacaagtaacattgatttctacacaataatttgtctctttttgtctatttgatcatcgctgaggactcaccgatccattaatttcgtattttcatattgtttttttcagcttataaggagatcaattacgaataatctaaagggtctttgcatatagagatgcaaaagacctcatttttgttgtaaattttttatttttttgttgtggggttgttcaatttcgtatttttttttttgtgggttttgaatttgggagatgggaaatatatttgtgaagaaaccgaagatcaccgaagttgatagagcgattttgtctttgaagactcaaaggcgtaagcttgctcaatatcagcaacagctggatgctgttattgaagccgaaaaacaagctgcaaaagacttgctacgcgaaaagaagaaagagagggcccttttagcattgaaaaagaagaaagtgcaagaagaactattaaagcaagttgatgttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0093P12-2lNi1/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0093P12.2" temp_strand="-" temp_description="C12HBa0093P12.2  AC209662.1 htgs_phase:3 submitted_to_sgn_as:C12HBa0093P12 upload_account_name:italy">
        <position start="2722" stop="16"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="2422" g_stop="2038" g_length="385"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="386" r_length="386" r_score="0.995"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="2037" i_stop="446" i_length="1592">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="445" g_stop="316" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="387" r_stop="516" r_length="130" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0093P12.2" gen_strand="-" ref_id="SGN-E307480" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>515</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0093P12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E307480" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="2422" e_stop="2038"/>
          <exon e_start="445" e_stop="316"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAGATCAAAAAAGTTAGAACTCAAAGAACAAGTAACATTGATTTCTACACAATAATTTGTCTCTTTTTGTCTATTTGATCATCGCTGAGGACTCACCGATCCATTAATTTCGTATTTTCATATTGTTTTTTTCAGCTTATAAGGAGATCAATTACGAATAATCTAAAGGGTCTTTGCATATAGAGATGCAAAAGACCTCATTTTTGTTGTAAATTTTTTATTTTTTTGTTGTGGGGTTGTTCAATTTCGTA-TTTTTTTTTTGTGGGTTTTGAATTTGGGAGATGGGAAATATATTTGTGAAGAAACCGAAGATCACCGAAGTTGATAGAGCGATTTTGTCTTTGAAGACTCAAAGGCGTAAGCTTGCTCAATATCAGCAACAGGTATAAGGAATTTTATTTTTGCCCCTTTTTGAAAATTTTGACTGCAGTTCTCTTTTTGGTGGGCTAAACTAAAATTGCTTAGTTTAGTTAAGATGGATCATGGGTAGTTTTTGGATTTTTTTTTCTGGGATTGGTTATTGTGGAGGATTATTAGGTGAAATTATGAAATTTGACAGCAAGATGGCTTTTTGGGTGTTTATTGCAATGCACAATTATAGCTCAACAATGATGTTAATACTAGATTTATAATGTTGAGATTGAGTTGTAGAACTATGTGTTTTTTCTTGAGTCTTTTAGCAATAACTATGTTTAGGAAGAATTAGTTCTCTATGTTGGTATTTGAGCCGAGGGTCAACCTCCCTACCTCCAAGGTTTCCTACCTCCAAGGTTGCTGGTAGGGGTAAGGTCTTCGTAGACTTTACCTTCACAGACTCTACTTTGTGGGATTACACGGGTGTGTTGTTGTTGTTATTATATGGCATGCGATGAGTTTAAGTGGAGTAAGATGATTAGTGAGGGTTATATAGCGGATCCCAACTTGTTTTTGTACTGAGGCATTGTTGTTATTGGTTCTTCCTTGACCATAACGTGATGCTTAGAGGAGCTGTGTATCAAAGTCTCTATATTTCTGAATGAATCGACCAGCTCTTCCAATTTGAGAAACAATAGCAACTGAACTTGGCAGTACCTAGAATATTTGTAAATTTTACAATACACATTACATATCCGTCATCTCAGTGGTCATTATGTAGGGGAGGAAGAGATGTCGACAGCTTGTTCTTACTTTCAACACATAAAAGATCTACTAGACGGTGGTTCTGATTTGAAAAAAAAAAATGTACGTTTCATACAAAGGTTTTCATTTTCTGTAGAAGTTTGAGTAAATACTGCTTCATATGATGCTGATGATAAGAAAAAGTGAGTCTTTGATGGAGCTTTTGTCTTCTGTAATTGCCATCCAAGGAAACAATAGTCAACTCTATTCCTGGATGAAAGAAATGACCTAATAGAGAGCTTTCGTTTCCTTTCTCCGAGTCAGAAAAGAGAATCTGTGAATTGTCTAAATCTTCAAAACCATATAGCCTAGATATAAGTTGACCTACCAATTCTACTTCTGAGCAATTACCTTCTATACAAGACCTCAAGTCTCAGCATCAACCATTACTTGAAATAATAGCACTTTGTTGCTTATATCATATTTTCTGTTAAAAATGAACCAAAAAAAAAAAGAAGGGGCATTCTCAGTTTCATTGCAACTGGACACGCAGCTAATTTTAATAGTTCGGGGAAGTTCTACAGGAGAGTGACCCATACCTTGATTATGCAGTTAGTCAGAATGCTAACAATCCCAACAAAATTGAAAAGTAATAAAAGAAAGAAAAACCCAAAATTGGGTAGAAGTTGGTTTTACATGAAGTAGGGGAAGTTTTTTGGAATTCTATTAAACGGTGCAACTGAGATTGTCCACAATAAGAACTTAAAGGTCCTCTCCTCTTTTTTTGGTGCCAAGGGCTCCACGTAGGACTGATTTGCAAGCTTTCCTCAATGTTGGTTTCAGACCTGCTAATCCCTTCTGTTATTCTTTGTTTCAGCTGGATGCTGTTATTGAAGCCGAAAAACAAGCTGCAAAAGACTTGCTACGCGAAAAGAAGAAAGAGAGGGCCCTTTTAGCATTGAAAAAGAAGAAAGTGCAAGAAGAACTATTAAAGCAAGTTGATGTTT</genome_strand>
        <mrna_strand>AAAAGATCAAAAAAGTTAGAACTCAAAGAACAAGTAACATTGATTTCTACACAATAATTTGTCTCTTTTTGTCTATTTGATCATCGCTGAGGACTCACCGATCCATTAATTTCGTATTTTCATATTGTTTTTTTCAGCTTATAAGGAGATCAATTACGAATAATCTAAAGGGTCTTTGCATATAGAGATGCAAAAGACCTCATTTTTGTTGTAAATTTTTTATTTTTTTGTTGTGGGGTTGTTCAATTTCGTATTTTTTTTTTTGTGGGTTTTGAATTTGGGAGATGGGAAATATATTTGTGAAGAAACCGAAGATCACCGAAGTTGATAGAGCGATTTTGTCTTTGAAGACTCAAAGGCGTAAGCTTGCTCAATATCAGCAACAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGATGCTGTTATTGAAGCCGAAAAACAAGCTGCAAAAGACTTGCTACGCGAAAAGAAGAAAGAGAGGGCCCTTTTAGCATTGAAAAAGAAGAAAGTGCAAGAAGAACTATTAAAGCAAGTTGATGTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-k0pWa0/sgn_ests_tomato_potato" ref_id="SGN-E303502" ref_strand="+" ref_description="SGN-E303502 [cLEX-2-D19]">
      <seq>agatcaaaaaagttagaactcaaagaacaagtaacattgatttctacacaataatttgtctctttttgtctatttgatcatcgctgaggactcaccgatccattaatttcgtattttcatattgtttttttcagcttataaggagatcaattacgaataatctaaagggtctttgcatatagagatgcaaaagacctcatttttgttgtaaattttttatttttttgttgtggggttgttcaatttcgtatttttttttttgtgggttttgaatttgggagatgggaaatatatttgtgaagaaaccgaagatcaccgaagttgatagagcgattttgtctttgaagactcaaaggcgtaagcttgctcaatatcagcaacagctggatgctgttattgaagc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0093P12-2lNi1/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0093P12.2" temp_strand="-" temp_description="C12HBa0093P12.2  AC209662.1 htgs_phase:3 submitted_to_sgn_as:C12HBa0093P12 upload_account_name:italy">
        <position start="2719" stop="126"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="2419" g_stop="2038" g_length="382"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="383" r_length="383" r_score="0.995"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="2037" i_stop="446" i_length="1592">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="445" g_stop="426" g_length="20"/>
          <reference_exon_boundary r_type="cDNA" r_start="384" r_stop="403" r_length="20" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0093P12.2" gen_strand="-" ref_id="SGN-E303502" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>402</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0093P12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E303502" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="2419" e_stop="2038"/>
          <exon e_start="445" e_stop="426"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGATCAAAAAAGTTAGAACTCAAAGAACAAGTAACATTGATTTCTACACAATAATTTGTCTCTTTTTGTCTATTTGATCATCGCTGAGGACTCACCGATCCATTAATTTCGTATTTTCATATTGTTTTTTTCAGCTTATAAGGAGATCAATTACGAATAATCTAAAGGGTCTTTGCATATAGAGATGCAAAAGACCTCATTTTTGTTGTAAATTTTTTATTTTTTTGTTGTGGGGTTGTTCAATTTCGTA-TTTTTTTTTTGTGGGTTTTGAATTTGGGAGATGGGAAATATATTTGTGAAGAAACCGAAGATCACCGAAGTTGATAGAGCGATTTTGTCTTTGAAGACTCAAAGGCGTAAGCTTGCTCAATATCAGCAACAGGTATAAGGAATTTTATTTTTGCCCCTTTTTGAAAATTTTGACTGCAGTTCTCTTTTTGGTGGGCTAAACTAAAATTGCTTAGTTTAGTTAAGATGGATCATGGGTAGTTTTTGGATTTTTTTTTCTGGGATTGGTTATTGTGGAGGATTATTAGGTGAAATTATGAAATTTGACAGCAAGATGGCTTTTTGGGTGTTTATTGCAATGCACAATTATAGCTCAACAATGATGTTAATACTAGATTTATAATGTTGAGATTGAGTTGTAGAACTATGTGTTTTTTCTTGAGTCTTTTAGCAATAACTATGTTTAGGAAGAATTAGTTCTCTATGTTGGTATTTGAGCCGAGGGTCAACCTCCCTACCTCCAAGGTTTCCTACCTCCAAGGTTGCTGGTAGGGGTAAGGTCTTCGTAGACTTTACCTTCACAGACTCTACTTTGTGGGATTACACGGGTGTGTTGTTGTTGTTATTATATGGCATGCGATGAGTTTAAGTGGAGTAAGATGATTAGTGAGGGTTATATAGCGGATCCCAACTTGTTTTTGTACTGAGGCATTGTTGTTATTGGTTCTTCCTTGACCATAACGTGATGCTTAGAGGAGCTGTGTATCAAAGTCTCTATATTTCTGAATGAATCGACCAGCTCTTCCAATTTGAGAAACAATAGCAACTGAACTTGGCAGTACCTAGAATATTTGTAAATTTTACAATACACATTACATATCCGTCATCTCAGTGGTCATTATGTAGGGGAGGAAGAGATGTCGACAGCTTGTTCTTACTTTCAACACATAAAAGATCTACTAGACGGTGGTTCTGATTTGAAAAAAAAAAATGTACGTTTCATACAAAGGTTTTCATTTTCTGTAGAAGTTTGAGTAAATACTGCTTCATATGATGCTGATGATAAGAAAAAGTGAGTCTTTGATGGAGCTTTTGTCTTCTGTAATTGCCATCCAAGGAAACAATAGTCAACTCTATTCCTGGATGAAAGAAATGACCTAATAGAGAGCTTTCGTTTCCTTTCTCCGAGTCAGAAAAGAGAATCTGTGAATTGTCTAAATCTTCAAAACCATATAGCCTAGATATAAGTTGACCTACCAATTCTACTTCTGAGCAATTACCTTCTATACAAGACCTCAAGTCTCAGCATCAACCATTACTTGAAATAATAGCACTTTGTTGCTTATATCATATTTTCTGTTAAAAATGAACCAAAAAAAAAAAGAAGGGGCATTCTCAGTTTCATTGCAACTGGACACGCAGCTAATTTTAATAGTTCGGGGAAGTTCTACAGGAGAGTGACCCATACCTTGATTATGCAGTTAGTCAGAATGCTAACAATCCCAACAAAATTGAAAAGTAATAAAAGAAAGAAAAACCCAAAATTGGGTAGAAGTTGGTTTTACATGAAGTAGGGGAAGTTTTTTGGAATTCTATTAAACGGTGCAACTGAGATTGTCCACAATAAGAACTTAAAGGTCCTCTCCTCTTTTTTTGGTGCCAAGGGCTCCACGTAGGACTGATTTGCAAGCTTTCCTCAATGTTGGTTTCAGACCTGCTAATCCCTTCTGTTATTCTTTGTTTCAGCTGGATGCTGTTATTGAAGC</genome_strand>
        <mrna_strand>AGATCAAAAAAGTTAGAACTCAAAGAACAAGTAACATTGATTTCTACACAATAATTTGTCTCTTTTTGTCTATTTGATCATCGCTGAGGACTCACCGATCCATTAATTTCGTATTTTCATATTGTTTTTTTCAGCTTATAAGGAGATCAATTACGAATAATCTAAAGGGTCTTTGCATATAGAGATGCAAAAGACCTCATTTTTGTTGTAAATTTTTTATTTTTTTGTTGTGGGGTTGTTCAATTTCGTATTTTTTTTTTTGTGGGTTTTGAATTTGGGAGATGGGAAATATATTTGTGAAGAAACCGAAGATCACCGAAGTTGATAGAGCGATTTTGTCTTTGAAGACTCAAAGGCGTAAGCTTGCTCAATATCAGCAACAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGATGCTGTTATTGAAGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-k0pWa0/sgn_ests_tomato_potato" ref_id="SGN-E582102" ref_strand="+" ref_description="SGN-E582102 [7735]">
      <seq>atcaaagaaaaagttagaactcaagaacagtaacattgatttgtttacaataatttgtccgtttttatctatttgatcctcgccaaggactctccgatccattaatttcgtattttcatattgttttttcagcttatagggagatcaattacgaataatctaaagggtctttgcataaagatatgcaaaagacctcatttttgttgtaaatttattatttttttgttgtggggttgttcaatttcgtattttttttgtgggttttgaatttgggagatgggaaatatatttgtgaagaaaccgaagatcaccgaagttgataaagcgattttgtctttgaagactcaaaggcgtaagcttgctcaatatcagcaacagctggatgctgtaatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0093P12-2lNi1/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0093P12.2" temp_strand="-" temp_description="C12HBa0093P12.2  AC209662.1 htgs_phase:3 submitted_to_sgn_as:C12HBa0093P12 upload_account_name:italy">
        <position start="2713" stop="1731"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="2420" g_stop="2038" g_length="383"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="378" r_length="378" r_score="0.935"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0093P12.2" gen_strand="-" ref_id="SGN-E582102" ref_strand="+">
        <total_alignment_score>0.935</total_alignment_score>
        <cumulative_length_of_scored_exons>383</cumulative_length_of_scored_exons>
        <coverage percentage="0.975" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0093P12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E582102" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="2420" e_stop="2038"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGATCAAAAAAGTTAGAACTCAAAGAACAAGTAACATTGATTTCTACACAATAATTTGTCTCTTTTTGTCTATTTGATCATCGCTGAGGACTCACCGATCCATTAATTTCGTATTTTCATATTGTTTTTTTCAGCTTATAAGGAGATCAATTACGAATAATCTAAAGGGTCTTTGCATATAGAGATGCAAAAGACCTCATTTTTGTTGTAAATTTTTTATTTTTTTGTTGTGGGGTTGTTCAATTTCGTATTTTTTTTTTGTGGGTTTTGAATTTGGGAGATGGGAAATATATTTGTGAAGAAACCGAAGATCACCGAAGTTGATAGAGCGATTTTGTCTTTGAAGACTCAAAGGCGTAAGCTTGCTCAATATCAGCAACAG</genome_strand>
        <mrna_strand>ATCAAAGAAAAAGTTAGAACTC-AAGAAC-AGTAACATTGATTTGTTTACAATAATTTGTCCGTTTTTATCTATTTGATCCTCGCCAAGGACTCTCCGATCCATTAATTTCGTATTTTCATATTG-TTTTTTCAGCTTATAGGGAGATCAATTACGAATAATCTAAAGGGTCTTTGCATAAAGATATGCAAAAGACCTCATTTTTGTTGTAAATTTATTATTTTTTTGTTGTGGGGTTGTTCAATTTCGTA--TTTTTTTTGTGGGTTTTGAATTTGGGAGATGGGAAATATATTTGTGAAGAAACCGAAGATCACCGAAGTTGATAAAGCGATTTTGTCTTTGAAGACTCAAAGGCGTAAGCTTGCTCAATATCAGCAACAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-k0pWa0/sgn_ests_tomato_potato" ref_id="SGN-E331254" ref_strand="+" ref_description="SGN-E331254 [cTOD-6-D13]">
      <seq>aaaaaagttagaactcaaagaacaagtaacattgatttctacacaataatttgtctctttttgtctatttgatcatcgctgaggactcaccgatccattaatttcgtattttcatattgtttttttcagcttataaggagatcaattacgaataatctaaagggtctttgcatatagagatgcaaaagacctcatttttgttgtaaattttttatttttttgttgtggggttgttcaatttcgtattttttttttgtgggttttgaatttgggagatgggaaatatatttgtgaagaaaccgaagatcaccgaagttgatagagcgattttgtctttgaagactcaaaggcgtaagcttgctcaata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0093P12-2lNi1/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0093P12.2" temp_strand="-" temp_description="C12HBa0093P12.2  AC209662.1 htgs_phase:3 submitted_to_sgn_as:C12HBa0093P12 upload_account_name:italy">
        <position start="2714" stop="1748"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="2414" g_stop="2048" g_length="367"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="367" r_length="367" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0093P12.2" gen_strand="-" ref_id="SGN-E331254" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>367</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0093P12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E331254" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="2414" e_stop="2048"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAAAGTTAGAACTCAAAGAACAAGTAACATTGATTTCTACACAATAATTTGTCTCTTTTTGTCTATTTGATCATCGCTGAGGACTCACCGATCCATTAATTTCGTATTTTCATATTGTTTTTTTCAGCTTATAAGGAGATCAATTACGAATAATCTAAAGGGTCTTTGCATATAGAGATGCAAAAGACCTCATTTTTGTTGTAAATTTTTTATTTTTTTGTTGTGGGGTTGTTCAATTTCGTATTTTTTTTTTGTGGGTTTTGAATTTGGGAGATGGGAAATATATTTGTGAAGAAACCGAAGATCACCGAAGTTGATAGAGCGATTTTGTCTTTGAAGACTCAAAGGCGTAAGCTTGCTCAATA</genome_strand>
        <mrna_strand>AAAAAAGTTAGAACTCAAAGAACAAGTAACATTGATTTCTACACAATAATTTGTCTCTTTTTGTCTATTTGATCATCGCTGAGGACTCACCGATCCATTAATTTCGTATTTTCATATTGTTTTTTTCAGCTTATAAGGAGATCAATTACGAATAATCTAAAGGGTCTTTGCATATAGAGATGCAAAAGACCTCATTTTTGTTGTAAATTTTTTATTTTTTTGTTGTGGGGTTGTTCAATTTCGTATTTTTTTTTTGTGGGTTTTGAATTTGGGAGATGGGAAATATATTTGTGAAGAAACCGAAGATCACCGAAGTTGATAGAGCGATTTTGTCTTTGAAGACTCAAAGGCGTAAGCTTGCTCAATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-k0pWa0/sgn_ests_tomato_potato" ref_id="SGN-E307348" ref_strand="+" ref_description="SGN-E307348 [cLEY-12-J14]">
      <seq>acaataatttgtctctttttggctatttgatcatcgctgaggactcaccgatccattaattgagtattttcatattgcttgtttcagcttataaggagatcaattacgaataatctaaagggtctttgcatatagagatgcaaaagacctcatttgtggtgtaaattctttattgttttgatgtggggttgttcaattccgtatttttttttttgtgggttgtgaatttgggagatgggaaatat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0093P12-2lNi1/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0093P12.2" temp_strand="-" temp_description="C12HBa0093P12.2  AC209662.1 htgs_phase:3 submitted_to_sgn_as:C12HBa0093P12 upload_account_name:italy">
        <position start="2672" stop="1829"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="2372" g_stop="2129" g_length="244"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="245" r_length="245" r_score="0.943"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0093P12.2" gen_strand="-" ref_id="SGN-E307348" ref_strand="+">
        <total_alignment_score>0.943</total_alignment_score>
        <cumulative_length_of_scored_exons>244</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0093P12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E307348" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="2372" e_stop="2129"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACAATAATTTGTCTCTTTTTGTCTATTTGATCATCGCTGAGGACTCACCGATCCATTAATTTCGTATTTTCATATTGTTTTTTTCAGCTTATAAGGAGATCAATTACGAATAATCTAAAGGGTCTTTGCATATAGAGATGCAAAAGACCTCATTTTTGTTGTAAATTTTTTATTTTTTTGTTGTGGGGTTGTTCAATTTCGTA-TTTTTTTTTTGTGGGTTTTGAATTTGGGAGATGGGAAATAT</genome_strand>
        <mrna_strand>ACAATAATTTGTCTCTTTTTGGCTATTTGATCATCGCTGAGGACTCACCGATCCATTAATTGAGTATTTTCATATTGCTTGTTTCAGCTTATAAGGAGATCAATTACGAATAATCTAAAGGGTCTTTGCATATAGAGATGCAAAAGACCTCATTTGTGGTGTAAATTCTTTATTGTTTTGATGTGGGGTTGTTCAATTCCGTATTTTTTTTTTTGTGGGTTGTGAATTTGGGAGATGGGAAATAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-k0pWa0/sgn_ests_tomato_potato" ref_id="SGN-E545754" ref_strand="-" ref_description="SGN-E545754 [TUS-68-M7]">
      <seq>atttttcaaaaaacgttggtcaagttgttgttcttggtggtgcttttgctgtaaatggaaatgtgagtccagcagctgaggcaaatatcttcaaagatccaactgctgctgatattgtatttacaagtggtgctgatgttcttgctgttggattaaatattacacatcaagttgtccttactgattctcatcgtggcgaattggcaaagtccaatggaaagtttgccaagtacctcagcaagcttttggatgtctatttcgattatcacaatactgcatacagcacgagaggtgtcttccttcatgatccaactgctttacttgctgctgttaatccatcactcctcacctattcagaaggtgtcgttcgcgttcagacagttggcatcacaaagggtctcacaatcttttataacaaacagaaaaggtttgttgaagtcactgaatggtctgaaaaacctatagttaaagtggcagcaactgttgatgctcctaaagttatcgaattggtgatgacacgactcgtcaattcttagaagtattcattgaacatttatttgaacagtgttactgtctttctgcactcaatattcagaaacttaactacgctataaggaacggaatcttaaactatagaccaagtactactctcaggaacaaggatgaatgtatgtaagcagtaagcagctcatatacagaatatgaacttgcaaaaataagttacagctagactagtcgtgttctgatagatttaatctttggtaaagatatgacatttgagcctaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0093P12-2lNi1/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0093P12.2" temp_strand="-" temp_description="C12HBa0093P12.2  AC209662.1 htgs_phase:3 submitted_to_sgn_as:C12HBa0093P12 upload_account_name:italy">
        <position start="10441" stop="8367"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="10141" g_stop="10057" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="86" r_length="86" r_score="0.976"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="10056" i_stop="9980" i_length="77">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.684" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="9979" g_stop="9883" g_length="97"/>
          <reference_exon_boundary r_type="cDNA" r_start="87" r_stop="183" r_length="97" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="9882" i_stop="9456" i_length="427">
            <donor d_prob="0.962" d_score="1.00"/>
            <acceptor a_prob="0.666" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="9455" g_stop="9348" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="184" r_stop="291" r_length="108" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="9347" i_stop="9254" i_length="94">
            <donor d_prob="0.481" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="9253" g_stop="9118" g_length="136"/>
          <reference_exon_boundary r_type="cDNA" r_start="292" r_stop="427" r_length="136" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="9117" i_stop="9027" i_length="91">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.917" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="9026" g_stop="8658" g_length="369"/>
          <reference_exon_boundary r_type="cDNA" r_start="428" r_stop="795" r_length="368" r_score="0.978"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0093P12.2" gen_strand="-" ref_id="SGN-E545754" ref_strand="-">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>795</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0093P12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E545754" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="10141" e_stop="10057"/>
          <exon e_start="9979" e_stop="9883"/>
          <exon e_start="9455" e_stop="9348"/>
          <exon e_start="9253" e_stop="9118"/>
          <exon e_start="9026" e_stop="8658"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTTTTC-AAAAACGTTGGTCAAGTTGTTGTTCTTGGTGGTGCTTTTGCTGTAAATGGAAATGTGAGTCCAGCAGCTGAGGCAAATGTAAGTTGCTAATAGCTACATTCTTTATATGTGCTTCAACTTCTAAGACTTTTTTTTTTATTCTTCGTTTGCGCAAGATCTTCAAAGATCCAACTGCTGCTGATATTGTATTTACAAGTGGTGCTGATGTTCTTGCTGTTGGATTAAATATTACACATCAAGTTGTCCTTACTGGTAATCTTTTCTTTGTTTCTTAAGTTTCATTTCAAGCCACTGTCTCCGTTGTTATTTTAAGAAGAATGTGCTATCGAATAATAGAAACAAATACTAAGAGAGTAGTGTAGAGGAGGCGCGAGAGTTTGGCTATAGCAAGTTTTAGCAGATGTTGAGGTATAGGCCAAAGAAGAACGGGAGGATGTGATTAGACAGGACATGACTAGTTTTCAACTCACTGAGGACATGATCCTAGATAGAAAAGTATGGAGATCAAGGATTAAGGTAGAAAGGTAGTAATCCTATCTACACATAAGTATCTTATTCTCTATTTTTTACTACTACCTGTTACTTCATTTGCTTTGTTTATCTTGTTATTTTGCGGTCTTAGCTCCTAGGGTCCTGTTTTAGTTAACTTCTCTTAATAGCATCTATCTACTGTTGTTAGATTCTCATCGTGGCGAATTGGCAAAGTCCAATGGAAAGTTTGCCAAGTACCTCAGCAAGCTTTTGGATGTCTATTTCGATTATCACAATACTGCATACAGCACGAGAGGTCTGTCTGTCACGTGCAAAGTTAGCTGTTTCCATATTTCTCGTTTGGTTTCTACTCACTTTCTTTATGTAACTGGAATCGGGGCTCTATGTAGGTGTCTTCCTTCATGATCCAACTGCTTTACTTGCTGCTGTTAATCCATCACTCCTCACCTATTCAGAAGGTGTCGTTCGCGTTCAGACAGTTGGCATCACAAAGGGTCTCACAATCTTTTATAACAAACAGAAAAGGTATTTGGTTCATAATGCCTTAATATAAGTGTTATATTGTTGCTATATTATCCCTATAACTACATACTTCATCTGCTTTTGGTTTTACAAGGTTTGTTGAAGTCACTGAATGGTCTGAAAAACCTATAGTTAAAGTGGCAGCAACTGTTGATGCTCCTAAAGTTATCGAATTGGTGATGACACGACTCGTCAATTCTTAGAAGTATTCATTGAACATTTATTTGAACAGTGTTACTGTCTTTCTGCACTCAATATTCAGAAACTTAACTACGCTATAAGGAACGGAATCTTAAACTATAGACCAAGTACTACTCTCAGGAACAAGGATGAATGTATGTAAGCAGTAAGCAGCTCATATACAGAATATGAACTTGCAAAAATAAGTTACAGCTAGACTAGTCGTGTTCTGATAGATTTAATCTTTGTGTAAAGATATGACATTTGAGCCTAACTCAACTCT</genome_strand>
        <mrna_strand>ATTTTTCAAAAAACGTTGGTCAAGTTGTTGTTCTTGGTGGTGCTTTTGCTGTAAATGGAAATGTGAGTCCAGCAGCTGAGGCAAAT.............................................................................ATCTTCAAAGATCCAACTGCTGCTGATATTGTATTTACAAGTGGTGCTGATGTTCTTGCTGTTGGATTAAATATTACACATCAAGTTGTCCTTACTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCTCATCGTGGCGAATTGGCAAAGTCCAATGGAAAGTTTGCCAAGTACCTCAGCAAGCTTTTGGATGTCTATTTCGATTATCACAATACTGCATACAGCACGAGAG..............................................................................................GTGTCTTCCTTCATGATCCAACTGCTTTACTTGCTGCTGTTAATCCATCACTCCTCACCTATTCAGAAGGTGTCGTTCGCGTTCAGACAGTTGGCATCACAAAGGGTCTCACAATCTTTTATAACAAACAGAAAAG...........................................................................................GTTTGTTGAAGTCACTGAATGGTCTGAAAAACCTATAGTTAAAGTGGCAGCAACTGTTGATGCTCCTAAAGTTATCGAATTGGTGATGACACGACTCGTCAATTCTTAGAAGTATTCATTGAACATTTATTTGAACAGTGTTACTGTCTTTCTGCACTCAATATTCAGAAACTTAACTACGCTATAAGGAACGGAATCTTAAACTATAGACCAAGTACTACTCTCAGGAACAAGGATGAATGTATGTAAGCAGTAAGCAGCTCATATACAGAATATGAACTTGCAAAAATAAGTTACAGCTAGACTAGTCGTGTTCTGATAGATTTAATCTTTG-GTAAAGATATGACATTTGAGCCTAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-k0pWa0/sgn_ests_tomato_potato" ref_id="SGN-E545761" ref_strand="-" ref_description="SGN-E545761 [TUS-68-M11]">
      <seq>agcacgagaggtgtcttccttcatgatccaactgctttacttgctgctgttaatccatcactcctcacctattcagaaggtgtcgttagcgttcagacagttggcatcacaaagggtctcacaatcttttataacaaacagaaaaggtttgttgaagtcactgaatggtctgaaaaacctatagttaaagtggcagcaactgttgatgctcctaaagttatcgaattggtgatgacacgactcgtcaattcttagaagtattcattgaacatttatttgaacagtgttactgtctttctgcactcaatattcagaaacttaactacgctataaggaacggaatcttaaactatagaccaagtactactctcaggaacaaggatgaatgtatgtaagcagtaagcagctcatatacagaatatgaacttgcaaaaataagttacagctagactagtcgtgttctgatagatttaatcttgggtaaagatatgaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0093P12-2lNi1/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0093P12.2" temp_strand="-" temp_description="C12HBa0093P12.2  AC209662.1 htgs_phase:3 submitted_to_sgn_as:C12HBa0093P12 upload_account_name:italy">
        <position start="9564" stop="8378"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="9357" g_stop="9348" g_length="10"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="10" r_length="10" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="9347" i_stop="9254" i_length="94">
            <donor d_prob="0.481" d_score="0.00"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="9253" g_stop="9118" g_length="136"/>
          <reference_exon_boundary r_type="cDNA" r_start="11" r_stop="146" r_length="136" r_score="0.993"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="9117" i_stop="9027" i_length="91">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.917" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="9026" g_stop="8678" g_length="349"/>
          <reference_exon_boundary r_type="cDNA" r_start="147" r_stop="494" r_length="348" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0093P12.2" gen_strand="-" ref_id="SGN-E545761" ref_strand="-">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>495</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0093P12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E545761" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="9357" e_stop="9348"/>
          <exon e_start="9253" e_stop="9118"/>
          <exon e_start="9026" e_stop="8678"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGCACGAGAGGTCTGTCTGTCACGTGCAAAGTTAGCTGTTTCCATATTTCTCGTTTGGTTTCTACTCACTTTCTTTATGTAACTGGAATCGGGGCTCTATGTAGGTGTCTTCCTTCATGATCCAACTGCTTTACTTGCTGCTGTTAATCCATCACTCCTCACCTATTCAGAAGGTGTCGTTCGCGTTCAGACAGTTGGCATCACAAAGGGTCTCACAATCTTTTATAACAAACAGAAAAGGTATTTGGTTCATAATGCCTTAATATAAGTGTTATATTGTTGCTATATTATCCCTATAACTACATACTTCATCTGCTTTTGGTTTTACAAGGTTTGTTGAAGTCACTGAATGGTCTGAAAAACCTATAGTTAAAGTGGCAGCAACTGTTGATGCTCCTAAAGTTATCGAATTGGTGATGACACGACTCGTCAATTCTTAGAAGTATTCATTGAACATTTATTTGAACAGTGTTACTGTCTTTCTGCACTCAATATTCAGAAACTTAACTACGCTATAAGGAACGGAATCTTAAACTATAGACCAAGTACTACTCTCAGGAACAAGGATGAATGTATGTAAGCAGTAAGCAGCTCATATACAGAATATGAACTTGCAAAAATAAGTTACAGCTAGACTAGTCGTGTTCTGATAGATTTAATCTTTGTGTAAAGATATGACA</genome_strand>
        <mrna_strand>AGCACGAGAG..............................................................................................GTGTCTTCCTTCATGATCCAACTGCTTTACTTGCTGCTGTTAATCCATCACTCCTCACCTATTCAGAAGGTGTCGTTAGCGTTCAGACAGTTGGCATCACAAAGGGTCTCACAATCTTTTATAACAAACAGAAAAG...........................................................................................GTTTGTTGAAGTCACTGAATGGTCTGAAAAACCTATAGTTAAAGTGGCAGCAACTGTTGATGCTCCTAAAGTTATCGAATTGGTGATGACACGACTCGTCAATTCTTAGAAGTATTCATTGAACATTTATTTGAACAGTGTTACTGTCTTTCTGCACTCAATATTCAGAAACTTAACTACGCTATAAGGAACGGAATCTTAAACTATAGACCAAGTACTACTCTCAGGAACAAGGATGAATGTATGTAAGCAGTAAGCAGCTCATATACAGAATATGAACTTGCAAAAATAAGTTACAGCTAGACTAGTCGTGTTCTGATAGATTTAATC-TTGGGTAAAGATATGACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-k0pWa0/sgn_ests_tomato_potato" ref_id="SGN-E545755" ref_strand="+" ref_description="SGN-E545755 [TUS-68-M7]">
      <seq>ctataatgaatccctttttttaattcatttgcataatcaataaaatggtagaagaaatcaagaaaatcatcattgatactgaccctggaattgatgatgcaatcgcgattttcgtggcacttcaatctcctgaaattgaagtaattggactcacaacaatatttggtaatgttcagacaactctgtcaaccagaaatgctttacatctgttggagatagctgggaggacagatattccagtggctgaaggctcacacgttacgatcactgaaggcgtaaaacttcaaagtagtggatatgttcatggcgcggatggactcggaaaccaaaacatttctccacccaaaggaaaggctattgaacagactgcagctgaatttctcattcagcaaactagtctttaccctggaaaggtcactgttgtggccttaggccccctgacaaatatagcacttgctattcagttggatcctgaatttttcaaaaacgttggtcaagttgttgttcttggtggtgcttttgctgtaaatggaaatgtgagtccagcagctgaggcaaatatcttcaaagatccaactgctgctgatattgtatttacaagtggtgctgatgttcttgctgttggattaaatattacacatcaagttgtccttactggatctcatcg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0093P12-2lNi1/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0093P12.2" temp_strand="-" temp_description="C12HBa0093P12.2  AC209662.1 htgs_phase:3 submitted_to_sgn_as:C12HBa0093P12 upload_account_name:italy">
        <position start="11790" stop="9572"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11490" g_stop="11398" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="93" r_length="93" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="11397" i_stop="11054" i_length="344">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.963" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="11053" g_stop="10938" g_length="116"/>
          <reference_exon_boundary r_type="cDNA" r_start="94" r_stop="209" r_length="116" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="10937" i_stop="10695" i_length="243">
            <donor d_prob="0.922" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="10694" g_stop="10635" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="210" r_stop="269" r_length="60" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="10634" i_stop="10434" i_length="201">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="10433" g_stop="10248" g_length="186"/>
          <reference_exon_boundary r_type="cDNA" r_start="270" r_stop="455" r_length="186" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="10247" i_stop="10162" i_length="86">
            <donor d_prob="0.910" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="10161" g_stop="10057" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="456" r_stop="560" r_length="105" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="10056" i_stop="9980" i_length="77">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.684" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="9979" g_stop="9883" g_length="97"/>
          <reference_exon_boundary r_type="cDNA" r_start="561" r_stop="657" r_length="97" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0093P12.2" gen_strand="-" ref_id="SGN-E545755" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>657</cumulative_length_of_scored_exons>
        <coverage percentage="0.985" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0093P12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E545755" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11490" e_stop="11398"/>
          <exon e_start="11053" e_stop="10938"/>
          <exon e_start="10694" e_stop="10635"/>
          <exon e_start="10433" e_stop="10248"/>
          <exon e_start="10161" e_stop="10057"/>
          <exon e_start="9979" e_stop="9883"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTATAATGAATCCCTTTTTTTAATTCATTTGCATAATCAATAAAATGGTAGAAGAAATCAAGAAAATCATCATTGATACTGACCCTGGAATTGGTAATTTTGCTTTTATTACAACTATTTCTCGTAGTTTTTTGTTCTTCGATTTTGATTATTACCTGTGTTTTTTGTGCTTTGATTGTCACATTATTTCGTTGTCATTGCTATTCTTTCTTTCTTATGTTGTGTACTTGCTCCCATGTCACACGTCTAATCGTGGTTACCACTCTACGAGTTAGATAAGATCTGTGTACATTCTATCCTCGTCATATTACACTATGGTATCTTCGTGTTTTTGTTTCTTCATAGTAAGAGCATTTCAAGATTTCATTTTTTTTTTGTGATTACCAATTCAACTGTTGAGTTATTTGAGATTTTATATGAATTAATATCATGTTTAGATGATGCAATCGCGATTTTCGTGGCACTTCAATCTCCTGAAATTGAAGTAATTGGACTCACAACAATATTTGGTAATGTTCAGACAACTCTGTCAACCAGAAATGCTTTACATCTGGTAAAGTTCTATCTTTATTTCATTATTGGACACGGAGTTTAAGAAAGAACGACTTTCCATACATAGTAAATGACTAGAAATATCACTCATGATAATATGTGATGTTCAGTTTTCAAATATAGAAATGTGTCGTTCTTTTTAGAACAGACTAAAAAGGAAAGGGTAACATATAAAATGAAAAACGTACGTTTAGTTCTTTTGCCATGAGCATGAATGTTGATTTTTCGAGTTTTGATGATTTAGTTGGAGATAGCTGGGAGGACAGATATTCCAGTGGCTGAAGGCTCACACGTTACGATCACTGTATGTTCAGTTCTCTGTCTTATTGCTCATCCATATTACAATACAAACAAATTGATACGGAGGGAGTATAAGATTTACAGAACGAAATGAACACTTTGTAATGTTTACAGTATTTCTGATTGTGTACCTTTGCTCATTCAGCATATTTAGACCTAGCTTAGAAATTTTTCCCCCGCGGACTCTGTTTATGTTCATGTAAAGGAAGGCGTAAAACTTCAAAGTAGTGGATATGTTCATGGCGCGGATGGACTCGGAAACCAAAACATTTCTCCACCCAAAGGAAAGGCTATTGAACAGACTGCAGCTGAATTTCTCATTCAGCAAACTAGTCTTTACCCTGGAAAGGTCACTGTTGTGGCCTTAGGCCCCCTGACAAATATAGCACTTGTAAGTACGAGATAATGGTCAATAACGCACTTGAAGTATTACTTGTTTGCGAGTTTCCTACCTGATATATGTATATATATGAACAGGCTATTCAGTTGGATCCTGAATTTTTCAAAAACGTTGGTCAAGTTGTTGTTCTTGGTGGTGCTTTTGCTGTAAATGGAAATGTGAGTCCAGCAGCTGAGGCAAATGTAAGTTGCTAATAGCTACATTCTTTATATGTGCTTCAACTTCTAAGACTTTTTTTTTTATTCTTCGTTTGCGCAAGATCTTCAAAGATCCAACTGCTGCTGATATTGTATTTACAAGTGGTGCTGATGTTCTTGCTGTTGGATTAAATATTACACATCAAGTTGTCCTTACTG</genome_strand>
        <mrna_strand>CTATAATGAATCCCTTTTTTTAATTCATTTGCATAATCAATAAAATGGTAGAAGAAATCAAGAAAATCATCATTGATACTGACCCTGGAATTG........................................................................................................................................................................................................................................................................................................................................................ATGATGCAATCGCGATTTTCGTGGCACTTCAATCTCCTGAAATTGAAGTAATTGGACTCACAACAATATTTGGTAATGTTCAGACAACTCTGTCAACCAGAAATGCTTTACATCTG...................................................................................................................................................................................................................................................TTGGAGATAGCTGGGAGGACAGATATTCCAGTGGCTGAAGGCTCACACGTTACGATCACT.........................................................................................................................................................................................................GAAGGCGTAAAACTTCAAAGTAGTGGATATGTTCATGGCGCGGATGGACTCGGAAACCAAAACATTTCTCCACCCAAAGGAAAGGCTATTGAACAGACTGCAGCTGAATTTCTCATTCAGCAAACTAGTCTTTACCCTGGAAAGGTCACTGTTGTGGCCTTAGGCCCCCTGACAAATATAGCACTT......................................................................................GCTATTCAGTTGGATCCTGAATTTTTCAAAAACGTTGGTCAAGTTGTTGTTCTTGGTGGTGCTTTTGCTGTAAATGGAAATGTGAGTCCAGCAGCTGAGGCAAAT.............................................................................ATCTTCAAAGATCCAACTGCTGCTGATATTGTATTTACAAGTGGTGCTGATGTTCTTGCTGTTGGATTAAATATTACACATCAAGTTGTCCTTACTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-k0pWa0/sgn_ests_tomato_potato" ref_id="SGN-E545762" ref_strand="+" ref_description="SGN-E545762 [TUS-68-M11]">
      <seq>ctataatgaatccctttttttaattcatttgcataatcaataaaatggtagaagaaatcaagaaaatcatcattgatactgaccctggaattgatgatgcaatcgcgattttcgtggcacttcaatctcctgaaattgaagtaattggactcacaacaatatttggtaatgttcagacaactctgtcaaccagaaatgctttacatctgttggagatagctgggaggacagatattccagtggctgaaggctcacacgttacgatcactgaaggcgtaaaacttcaaagtagtggatatgttcatggcgcggatggactcggaaaccaaaacatttctccacccaaaggaaaggctattgaacagactgcagctgaatttctcattcagcaaactagtctttaccctggaaaggtcactgttgtggccttaggccccctgacaaatatagcacttgctattcagttggatcctgaatttttcaaaaacgttggtcaagttgttgttcttggtggggcttttgctgtaaatggaaatgtgagtc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0093P12-2lNi1/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0093P12.2" temp_strand="-" temp_description="C12HBa0093P12.2  AC209662.1 htgs_phase:3 submitted_to_sgn_as:C12HBa0093P12 upload_account_name:italy">
        <position start="11790" stop="9774"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11490" g_stop="11398" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="93" r_length="93" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="11397" i_stop="11054" i_length="344">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.963" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="11053" g_stop="10938" g_length="116"/>
          <reference_exon_boundary r_type="cDNA" r_start="94" r_stop="209" r_length="116" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="10937" i_stop="10695" i_length="243">
            <donor d_prob="0.922" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="10694" g_stop="10635" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="210" r_stop="269" r_length="60" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="10634" i_stop="10434" i_length="201">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="10433" g_stop="10248" g_length="186"/>
          <reference_exon_boundary r_type="cDNA" r_start="270" r_stop="455" r_length="186" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="10247" i_stop="10162" i_length="86">
            <donor d_prob="0.910" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="10161" g_stop="10074" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="456" r_stop="543" r_length="88" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0093P12.2" gen_strand="-" ref_id="SGN-E545762" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>543</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0093P12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E545762" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11490" e_stop="11398"/>
          <exon e_start="11053" e_stop="10938"/>
          <exon e_start="10694" e_stop="10635"/>
          <exon e_start="10433" e_stop="10248"/>
          <exon e_start="10161" e_stop="10074"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTATAATGAATCCCTTTTTTTAATTCATTTGCATAATCAATAAAATGGTAGAAGAAATCAAGAAAATCATCATTGATACTGACCCTGGAATTGGTAATTTTGCTTTTATTACAACTATTTCTCGTAGTTTTTTGTTCTTCGATTTTGATTATTACCTGTGTTTTTTGTGCTTTGATTGTCACATTATTTCGTTGTCATTGCTATTCTTTCTTTCTTATGTTGTGTACTTGCTCCCATGTCACACGTCTAATCGTGGTTACCACTCTACGAGTTAGATAAGATCTGTGTACATTCTATCCTCGTCATATTACACTATGGTATCTTCGTGTTTTTGTTTCTTCATAGTAAGAGCATTTCAAGATTTCATTTTTTTTTTGTGATTACCAATTCAACTGTTGAGTTATTTGAGATTTTATATGAATTAATATCATGTTTAGATGATGCAATCGCGATTTTCGTGGCACTTCAATCTCCTGAAATTGAAGTAATTGGACTCACAACAATATTTGGTAATGTTCAGACAACTCTGTCAACCAGAAATGCTTTACATCTGGTAAAGTTCTATCTTTATTTCATTATTGGACACGGAGTTTAAGAAAGAACGACTTTCCATACATAGTAAATGACTAGAAATATCACTCATGATAATATGTGATGTTCAGTTTTCAAATATAGAAATGTGTCGTTCTTTTTAGAACAGACTAAAAAGGAAAGGGTAACATATAAAATGAAAAACGTACGTTTAGTTCTTTTGCCATGAGCATGAATGTTGATTTTTCGAGTTTTGATGATTTAGTTGGAGATAGCTGGGAGGACAGATATTCCAGTGGCTGAAGGCTCACACGTTACGATCACTGTATGTTCAGTTCTCTGTCTTATTGCTCATCCATATTACAATACAAACAAATTGATACGGAGGGAGTATAAGATTTACAGAACGAAATGAACACTTTGTAATGTTTACAGTATTTCTGATTGTGTACCTTTGCTCATTCAGCATATTTAGACCTAGCTTAGAAATTTTTCCCCCGCGGACTCTGTTTATGTTCATGTAAAGGAAGGCGTAAAACTTCAAAGTAGTGGATATGTTCATGGCGCGGATGGACTCGGAAACCAAAACATTTCTCCACCCAAAGGAAAGGCTATTGAACAGACTGCAGCTGAATTTCTCATTCAGCAAACTAGTCTTTACCCTGGAAAGGTCACTGTTGTGGCCTTAGGCCCCCTGACAAATATAGCACTTGTAAGTACGAGATAATGGTCAATAACGCACTTGAAGTATTACTTGTTTGCGAGTTTCCTACCTGATATATGTATATATATGAACAGGCTATTCAGTTGGATCCTGAATTTTTCAAAAACGTTGGTCAAGTTGTTGTTCTTGGTGGTGCTTTTGCTGTAAATGGAAATGTGAGTC</genome_strand>
        <mrna_strand>CTATAATGAATCCCTTTTTTTAATTCATTTGCATAATCAATAAAATGGTAGAAGAAATCAAGAAAATCATCATTGATACTGACCCTGGAATTG........................................................................................................................................................................................................................................................................................................................................................ATGATGCAATCGCGATTTTCGTGGCACTTCAATCTCCTGAAATTGAAGTAATTGGACTCACAACAATATTTGGTAATGTTCAGACAACTCTGTCAACCAGAAATGCTTTACATCTG...................................................................................................................................................................................................................................................TTGGAGATAGCTGGGAGGACAGATATTCCAGTGGCTGAAGGCTCACACGTTACGATCACT.........................................................................................................................................................................................................GAAGGCGTAAAACTTCAAAGTAGTGGATATGTTCATGGCGCGGATGGACTCGGAAACCAAAACATTTCTCCACCCAAAGGAAAGGCTATTGAACAGACTGCAGCTGAATTTCTCATTCAGCAAACTAGTCTTTACCCTGGAAAGGTCACTGTTGTGGCCTTAGGCCCCCTGACAAATATAGCACTT......................................................................................GCTATTCAGTTGGATCCTGAATTTTTCAAAAACGTTGGTCAAGTTGTTGTTCTTGGTGGGGCTTTTGCTGTAAATGGAAATGTGAGTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-k0pWa0/sgn_ests_tomato_potato" ref_id="SGN-E312682" ref_strand="+" ref_description="SGN-E312682 [cLEZ-20-P20]">
      <seq>tataatgaatccctttttttaattcatttgcataatcaataaaatggtagaagaaatcaagaaaatcatcattgatactgaccctggaattgatgatgcaatcgcgattttcgtggcacttcaatctcctgaaattgaagtaattggactcacaacaatatttggtaatgttcagacaactctgtcaaccagaaatgctttacatctgttggagatagctgggaggacagatattccagtggctgaaggctcacacgttacgatcactgaaggcgtaaaacttcaaagtagtggatatgttcatggcgcggatggactcggaaaccaaaacatttctccacccaaaggaaaggctattgaacagactgcagctgaatttctcattcagcaaactagtctttaccctggaaaggtcactgttgtggccttaagccccctga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0093P12-2lNi1/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0093P12.2" temp_strand="-" temp_description="C12HBa0093P12.2  AC209662.1 htgs_phase:3 submitted_to_sgn_as:C12HBa0093P12 upload_account_name:italy">
        <position start="11789" stop="9962"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11489" g_stop="11398" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="92" r_length="92" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="11397" i_stop="11054" i_length="344">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.963" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="11053" g_stop="10938" g_length="116"/>
          <reference_exon_boundary r_type="cDNA" r_start="93" r_stop="208" r_length="116" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="10937" i_stop="10695" i_length="243">
            <donor d_prob="0.922" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="10694" g_stop="10635" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="209" r_stop="268" r_length="60" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="10634" i_stop="10434" i_length="201">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="10433" g_stop="10262" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="269" r_stop="440" r_length="172" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0093P12.2" gen_strand="-" ref_id="SGN-E312682" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>440</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0093P12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E312682" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11489" e_stop="11398"/>
          <exon e_start="11053" e_stop="10938"/>
          <exon e_start="10694" e_stop="10635"/>
          <exon e_start="10433" e_stop="10262"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATAATGAATCCCTTTTTTTAATTCATTTGCATAATCAATAAAATGGTAGAAGAAATCAAGAAAATCATCATTGATACTGACCCTGGAATTGGTAATTTTGCTTTTATTACAACTATTTCTCGTAGTTTTTTGTTCTTCGATTTTGATTATTACCTGTGTTTTTTGTGCTTTGATTGTCACATTATTTCGTTGTCATTGCTATTCTTTCTTTCTTATGTTGTGTACTTGCTCCCATGTCACACGTCTAATCGTGGTTACCACTCTACGAGTTAGATAAGATCTGTGTACATTCTATCCTCGTCATATTACACTATGGTATCTTCGTGTTTTTGTTTCTTCATAGTAAGAGCATTTCAAGATTTCATTTTTTTTTTGTGATTACCAATTCAACTGTTGAGTTATTTGAGATTTTATATGAATTAATATCATGTTTAGATGATGCAATCGCGATTTTCGTGGCACTTCAATCTCCTGAAATTGAAGTAATTGGACTCACAACAATATTTGGTAATGTTCAGACAACTCTGTCAACCAGAAATGCTTTACATCTGGTAAAGTTCTATCTTTATTTCATTATTGGACACGGAGTTTAAGAAAGAACGACTTTCCATACATAGTAAATGACTAGAAATATCACTCATGATAATATGTGATGTTCAGTTTTCAAATATAGAAATGTGTCGTTCTTTTTAGAACAGACTAAAAAGGAAAGGGTAACATATAAAATGAAAAACGTACGTTTAGTTCTTTTGCCATGAGCATGAATGTTGATTTTTCGAGTTTTGATGATTTAGTTGGAGATAGCTGGGAGGACAGATATTCCAGTGGCTGAAGGCTCACACGTTACGATCACTGTATGTTCAGTTCTCTGTCTTATTGCTCATCCATATTACAATACAAACAAATTGATACGGAGGGAGTATAAGATTTACAGAACGAAATGAACACTTTGTAATGTTTACAGTATTTCTGATTGTGTACCTTTGCTCATTCAGCATATTTAGACCTAGCTTAGAAATTTTTCCCCCGCGGACTCTGTTTATGTTCATGTAAAGGAAGGCGTAAAACTTCAAAGTAGTGGATATGTTCATGGCGCGGATGGACTCGGAAACCAAAACATTTCTCCACCCAAAGGAAAGGCTATTGAACAGACTGCAGCTGAATTTCTCATTCAGCAAACTAGTCTTTACCCTGGAAAGGTCACTGTTGTGGCCTTAGGCCCCCTGA</genome_strand>
        <mrna_strand>TATAATGAATCCCTTTTTTTAATTCATTTGCATAATCAATAAAATGGTAGAAGAAATCAAGAAAATCATCATTGATACTGACCCTGGAATTG........................................................................................................................................................................................................................................................................................................................................................ATGATGCAATCGCGATTTTCGTGGCACTTCAATCTCCTGAAATTGAAGTAATTGGACTCACAACAATATTTGGTAATGTTCAGACAACTCTGTCAACCAGAAATGCTTTACATCTG...................................................................................................................................................................................................................................................TTGGAGATAGCTGGGAGGACAGATATTCCAGTGGCTGAAGGCTCACACGTTACGATCACT.........................................................................................................................................................................................................GAAGGCGTAAAACTTCAAAGTAGTGGATATGTTCATGGCGCGGATGGACTCGGAAACCAAAACATTTCTCCACCCAAAGGAAAGGCTATTGAACAGACTGCAGCTGAATTTCTCATTCAGCAAACTAGTCTTTACCCTGGAAAGGTCACTGTTGTGGCCTTAAGCCCCCTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-k0pWa0/sgn_ests_tomato_potato" ref_id="SGN-E305600" ref_strand="+" ref_description="SGN-E305600 [cLEX-14-K14]">
      <seq>acaaataattcatcttccatccaaaaaaaaatcattcataattatggcttctctttttctatcgaaattttctttctttcttttactaataataataactttattttttcactcttctcattgtgatgtcctaacaagatgtcacatcacatcactttttcagttcggcgattctatcgcggatgctggaaacgtgatccgcatacctggtgccgtcatatcggcccaggcatggggtctaccttatggtgaaaccttttttcataaacctactggacgtttttctgacggtcgtattatcgctgactatatcgccacggctctcagtctcccattcctcaatccttacatggacaaatcaggtgtttcctttagtcaaggtgctaatttcgccgttgctggtgcaacggcgatgaataactcttttttggaggagaggggcattggacatgtcccgttcaacgttcctctcccgagtcaattagagtggtttaaatctcacctccagtcaacctatgggtcaaaatattctacaactctacgaaactctcttgtagtattaggagagtttggtggagttgattattggaatgctttagcgggaaataaacctgaacctgaggtacgtacgtacgtaccttttattattgatggcattata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0093P12-2lNi1/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0093P12.2" temp_strand="+" temp_description="C12HBa0093P12.2  AC209662.1 htgs_phase:3 submitted_to_sgn_as:C12HBa0093P12 upload_account_name:italy">
        <position start="19567" stop="20813"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19874" g_stop="20513" g_length="640"/>
          <reference_exon_boundary r_type="cDNA" r_start="22" r_stop="661" r_length="640" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0093P12.2" gen_strand="+" ref_id="SGN-E305600" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>640</cumulative_length_of_scored_exons>
        <coverage percentage="0.968" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0093P12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E305600" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19874" e_stop="20513"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAAAAAAAATCATTCATAATTATGGCTTCTCTTTTTCTATCGAAATTTTCTTTCTTTCTTTTACTAATAATAATAACTTTATTTTTTCACTCTTCTCATTGTGATGTCCTAACAAGATGTCACATCACATCACTTTTTCAGTTCGGCGATTCTATCGCGGATGCTGGAAACGTGATCCGCATACCTGGTGCCGTCATATCGGCCCAGGCATGGGGTCTACCTTATGGTGAAACCTTTTTTCATAAACCTACTGGACGTTTTTCTGACGGTCGTATTATCGCTGACTATATCGCCACGGCTCTCAGTCTCCCATTCCTCAATCCTTACATGGACAAATCAGGTGTTTCCTTTAGTCAAGGTGCTAATTTCGCCGTTGCTGGTGCAACGGCGATGAATAACTCTTTTTTGGAGGAGAGGGGCATTGGACATGTCCCGTTCAACGTTCCTCTCCCGAGTCAATTAGAGTGGTTTAAATCTCACCTCCAGTCAACCTATGGGTCAAAATATTCTACAACTCTACGAAACTCTCTTGTAGTATTAGGAGAGTTTGGTGGAGTTGATTATTGGAATGCTTTAGCGGGAAATAAACCTGAACCTGAGGTACGTACGTACGTACCTTTTATTATTGATGGCATTATA</genome_strand>
        <mrna_strand>CAAAAAAAAATCATTCATAATTATGGCTTCTCTTTTTCTATCGAAATTTTCTTTCTTTCTTTTACTAATAATAATAACTTTATTTTTTCACTCTTCTCATTGTGATGTCCTAACAAGATGTCACATCACATCACTTTTTCAGTTCGGCGATTCTATCGCGGATGCTGGAAACGTGATCCGCATACCTGGTGCCGTCATATCGGCCCAGGCATGGGGTCTACCTTATGGTGAAACCTTTTTTCATAAACCTACTGGACGTTTTTCTGACGGTCGTATTATCGCTGACTATATCGCCACGGCTCTCAGTCTCCCATTCCTCAATCCTTACATGGACAAATCAGGTGTTTCCTTTAGTCAAGGTGCTAATTTCGCCGTTGCTGGTGCAACGGCGATGAATAACTCTTTTTTGGAGGAGAGGGGCATTGGACATGTCCCGTTCAACGTTCCTCTCCCGAGTCAATTAGAGTGGTTTAAATCTCACCTCCAGTCAACCTATGGGTCAAAATATTCTACAACTCTACGAAACTCTCTTGTAGTATTAGGAGAGTTTGGTGGAGTTGATTATTGGAATGCTTTAGCGGGAAATAAACCTGAACCTGAGGTACGTACGTACGTACCTTTTATTATTGATGGCATTATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-k0pWa0/sgn_ests_tomato_potato" ref_id="SGN-E373690" ref_strand="+" ref_description="SGN-E373690 [TUS-33-G24]">
      <seq>acaaataattcatcttccatccaaaaaaaaatcattcataattatggcttctctttttctatcgaaattttctttctttcttttactaataataataactttattttttcactcttctcattgtgatgtcctaacaagatgtcacatcacatcactttttcagttcggcgattctatcgcggatgctggaaacgtgatccgcatacctggtgccgtcatatcggcccaggcatggggtctaccttatggtgaaaccttttttcataaacctactggacgtttttctgacggtcgtattatcgctgactatatcgccacggctctcagtctcccattcctcaatccttacatggacaaatcaggtgtttcctttagtcaaggtgctaatttcgccgttgctggtgcaacggcgatgaataactcttttttggaggagaggggcattggacatgtcccgttcaacgttcctctcccgagtcaattagagtggtttaaatctcacctccagtcaacctatgggtcaaaatattctacaactctacgaaactctcttgtagtattaggagagtttggtggagttgattattggaatgctttagcgggaaataaacctgaacctgaggtacgtacgtacgtaccttttattattgatggca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0093P12-2lNi1/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0093P12.2" temp_strand="+" temp_description="C12HBa0093P12.2  AC209662.1 htgs_phase:3 submitted_to_sgn_as:C12HBa0093P12 upload_account_name:italy">
        <position start="19567" stop="20808"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19874" g_stop="20508" g_length="635"/>
          <reference_exon_boundary r_type="cDNA" r_start="22" r_stop="656" r_length="635" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0093P12.2" gen_strand="+" ref_id="SGN-E373690" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>635</cumulative_length_of_scored_exons>
        <coverage percentage="0.968" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0093P12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E373690" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19874" e_stop="20508"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAAAAAAAATCATTCATAATTATGGCTTCTCTTTTTCTATCGAAATTTTCTTTCTTTCTTTTACTAATAATAATAACTTTATTTTTTCACTCTTCTCATTGTGATGTCCTAACAAGATGTCACATCACATCACTTTTTCAGTTCGGCGATTCTATCGCGGATGCTGGAAACGTGATCCGCATACCTGGTGCCGTCATATCGGCCCAGGCATGGGGTCTACCTTATGGTGAAACCTTTTTTCATAAACCTACTGGACGTTTTTCTGACGGTCGTATTATCGCTGACTATATCGCCACGGCTCTCAGTCTCCCATTCCTCAATCCTTACATGGACAAATCAGGTGTTTCCTTTAGTCAAGGTGCTAATTTCGCCGTTGCTGGTGCAACGGCGATGAATAACTCTTTTTTGGAGGAGAGGGGCATTGGACATGTCCCGTTCAACGTTCCTCTCCCGAGTCAATTAGAGTGGTTTAAATCTCACCTCCAGTCAACCTATGGGTCAAAATATTCTACAACTCTACGAAACTCTCTTGTAGTATTAGGAGAGTTTGGTGGAGTTGATTATTGGAATGCTTTAGCGGGAAATAAACCTGAACCTGAGGTACGTACGTACGTACCTTTTATTATTGATGGCA</genome_strand>
        <mrna_strand>CAAAAAAAAATCATTCATAATTATGGCTTCTCTTTTTCTATCGAAATTTTCTTTCTTTCTTTTACTAATAATAATAACTTTATTTTTTCACTCTTCTCATTGTGATGTCCTAACAAGATGTCACATCACATCACTTTTTCAGTTCGGCGATTCTATCGCGGATGCTGGAAACGTGATCCGCATACCTGGTGCCGTCATATCGGCCCAGGCATGGGGTCTACCTTATGGTGAAACCTTTTTTCATAAACCTACTGGACGTTTTTCTGACGGTCGTATTATCGCTGACTATATCGCCACGGCTCTCAGTCTCCCATTCCTCAATCCTTACATGGACAAATCAGGTGTTTCCTTTAGTCAAGGTGCTAATTTCGCCGTTGCTGGTGCAACGGCGATGAATAACTCTTTTTTGGAGGAGAGGGGCATTGGACATGTCCCGTTCAACGTTCCTCTCCCGAGTCAATTAGAGTGGTTTAAATCTCACCTCCAGTCAACCTATGGGTCAAAATATTCTACAACTCTACGAAACTCTCTTGTAGTATTAGGAGAGTTTGGTGGAGTTGATTATTGGAATGCTTTAGCGGGAAATAAACCTGAACCTGAGGTACGTACGTACGTACCTTTTATTATTGATGGCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-k0pWa0/sgn_ests_tomato_potato" ref_id="SGN-E543826" ref_strand="+" ref_description="SGN-E543826 [TUS-65-N12]">
      <seq>taattatggcttctctttttctatcgaaattttctttctttcttttactaataataataactttattttttcactcttctcattgtgatgtcctaacaagatgtcacatcacatcactttttcagttcggcgattctatcgcggatgctggaaacgtgatccgcatacctggtgccgtcatatcggcccaggcatggggtctaccttatggtgaaaccttttttcataaacctactggacgtttttctgacggtcgtattatcgctgactatatcgccacggctctcagtctcccattcctcaatccttacatggacaaatcaggtgtttcctttagtcaaggtgctaatttcgccgttgctggtgcaacggcgatgaataactcttttttggaggagaggggcattggacatgtcccgttcaacgttcctctcccgagtcaattagagtggtttaaatctcacctccagtcaacctatgggtcaaaatattctacaactctacgaaactctcttgtagtattaggagagtttggtggagttgattattggaatgctttagcgggaaataaacctgaacctgaggtacgtacgtacgtaccttttattattgatggcattataagtgccatcaaagaggtgatccaattaggatcgactcgaattttggttccaggagtttttccttttgggtgtctatcatcatatctaacaagattcgctgacac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0093P12-2lNi1/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0093P12.2" temp_strand="+" temp_description="C12HBa0093P12.2  AC209662.1 htgs_phase:3 submitted_to_sgn_as:C12HBa0093P12 upload_account_name:italy">
        <position start="19591" stop="20917"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19891" g_stop="20617" g_length="727"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="727" r_length="727" r_score="0.999"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0093P12.2" gen_strand="+" ref_id="SGN-E543826" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>727</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0093P12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E543826" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19891" e_stop="20617"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAATTATGGCTTCTCTTTTTCTATCGAAATTTTCTTTCTTTCTTTTACTAATAATAATAACTTTATTTTTTCACTCTTCTCATTGTGATGTCCTAACAAGATGTCACATCACATCACTTTTTCAGTTCGGCGATTCTATCGCGGATGCTGGAAACGTGATCCGCATACCTGGTGCCGTCATATCGGCCCAGGCATGGGGTCTACCTTATGGTGAAACCTTTTTTCATAAACCTACTGGACGTTTTTCTGACGGTCGTATTATCGCTGACTATATCGCCACGGCTCTCAGTCTCCCATTCCTCAATCCTTACATGGACAAATCAGGTGTTTCCTTTAGTCAAGGTGCTAATTTCGCCGTTGCTGGTGCAACGGCGATGAATAACTCTTTTTTGGAGGAGAGGGGCATTGGACATGTCCCGTTCAACGTTCCTCTCCCGAGTCAATTAGAGTGGTTTAAATCTCACCTCCAGTCAACCTATGGGTCAAAATATTCTACAACTCTACGAAACTCTCTTGTAGTATTAGGAGAGTTTGGTGGAGTTGATTATTGGAATGCTTTAGCGGGAAATAAACCTGAACCTGAGGTACGTACGTACGTACCTTTTATTATTGATGGCATTATAAGTGCCATCAAAGAGGTGATCCAATTAGGATCAACTCGAATTTTGGTTCCAGGAGTTTTTCCTTTTGGGTGTCTATCATCATATCTAACAAGATTCGCTGACAC</genome_strand>
        <mrna_strand>TAATTATGGCTTCTCTTTTTCTATCGAAATTTTCTTTCTTTCTTTTACTAATAATAATAACTTTATTTTTTCACTCTTCTCATTGTGATGTCCTAACAAGATGTCACATCACATCACTTTTTCAGTTCGGCGATTCTATCGCGGATGCTGGAAACGTGATCCGCATACCTGGTGCCGTCATATCGGCCCAGGCATGGGGTCTACCTTATGGTGAAACCTTTTTTCATAAACCTACTGGACGTTTTTCTGACGGTCGTATTATCGCTGACTATATCGCCACGGCTCTCAGTCTCCCATTCCTCAATCCTTACATGGACAAATCAGGTGTTTCCTTTAGTCAAGGTGCTAATTTCGCCGTTGCTGGTGCAACGGCGATGAATAACTCTTTTTTGGAGGAGAGGGGCATTGGACATGTCCCGTTCAACGTTCCTCTCCCGAGTCAATTAGAGTGGTTTAAATCTCACCTCCAGTCAACCTATGGGTCAAAATATTCTACAACTCTACGAAACTCTCTTGTAGTATTAGGAGAGTTTGGTGGAGTTGATTATTGGAATGCTTTAGCGGGAAATAAACCTGAACCTGAGGTACGTACGTACGTACCTTTTATTATTGATGGCATTATAAGTGCCATCAAAGAGGTGATCCAATTAGGATCGACTCGAATTTTGGTTCCAGGAGTTTTTCCTTTTGGGTGTCTATCATCATATCTAACAAGATTCGCTGACAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-k0pWa0/sgn_ests_tomato_potato" ref_id="SGN-E304360" ref_strand="+" ref_description="SGN-E304360 [cLEX-12-F8]">
      <seq>taattatggcttctctttttctatcgaaattttctttctttcttttactaataataataactttattttttcactcttctcattgtgatgtcctaacaagatgtcacatcacatcactttttcagttcggcgattctatcgcggatgctggaaacgtgatccgcatacctggtgccgtcatatcggcccaggcatggggtctaccttatggcgaaaccttttttcataaacctactggacgtttttctgacggtcgtattatcgctgactatatcgccacggctctcagtctcccattcctcaatccttacatggacaaatcaggtgtttcctttagtcaaggtgctaatttcgccgctgctggtgcaacggcgatgaataactcttttttggaggagaggggcattggacatgtcccgttcaacgttcctctcccgagtcaattagagtggtttaaatctcacctgcagtcaacctatgggtcaaaatattctacaactctacgaaactctcttgtagtattaggaga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0093P12-2lNi1/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0093P12.2" temp_strand="+" temp_description="C12HBa0093P12.2  AC209662.1 htgs_phase:3 submitted_to_sgn_as:C12HBa0093P12 upload_account_name:italy">
        <position start="19591" stop="20719"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19891" g_stop="20419" g_length="529"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="529" r_length="529" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0093P12.2" gen_strand="+" ref_id="SGN-E304360" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>529</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0093P12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E304360" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19891" e_stop="20419"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAATTATGGCTTCTCTTTTTCTATCGAAATTTTCTTTCTTTCTTTTACTAATAATAATAACTTTATTTTTTCACTCTTCTCATTGTGATGTCCTAACAAGATGTCACATCACATCACTTTTTCAGTTCGGCGATTCTATCGCGGATGCTGGAAACGTGATCCGCATACCTGGTGCCGTCATATCGGCCCAGGCATGGGGTCTACCTTATGGTGAAACCTTTTTTCATAAACCTACTGGACGTTTTTCTGACGGTCGTATTATCGCTGACTATATCGCCACGGCTCTCAGTCTCCCATTCCTCAATCCTTACATGGACAAATCAGGTGTTTCCTTTAGTCAAGGTGCTAATTTCGCCGTTGCTGGTGCAACGGCGATGAATAACTCTTTTTTGGAGGAGAGGGGCATTGGACATGTCCCGTTCAACGTTCCTCTCCCGAGTCAATTAGAGTGGTTTAAATCTCACCTCCAGTCAACCTATGGGTCAAAATATTCTACAACTCTACGAAACTCTCTTGTAGTATTAGGAGA</genome_strand>
        <mrna_strand>TAATTATGGCTTCTCTTTTTCTATCGAAATTTTCTTTCTTTCTTTTACTAATAATAATAACTTTATTTTTTCACTCTTCTCATTGTGATGTCCTAACAAGATGTCACATCACATCACTTTTTCAGTTCGGCGATTCTATCGCGGATGCTGGAAACGTGATCCGCATACCTGGTGCCGTCATATCGGCCCAGGCATGGGGTCTACCTTATGGCGAAACCTTTTTTCATAAACCTACTGGACGTTTTTCTGACGGTCGTATTATCGCTGACTATATCGCCACGGCTCTCAGTCTCCCATTCCTCAATCCTTACATGGACAAATCAGGTGTTTCCTTTAGTCAAGGTGCTAATTTCGCCGCTGCTGGTGCAACGGCGATGAATAACTCTTTTTTGGAGGAGAGGGGCATTGGACATGTCCCGTTCAACGTTCCTCTCCCGAGTCAATTAGAGTGGTTTAAATCTCACCTGCAGTCAACCTATGGGTCAAAATATTCTACAACTCTACGAAACTCTCTTGTAGTATTAGGAGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-k0pWa0/sgn_ests_tomato_potato" ref_id="SGN-E306291" ref_strand="+" ref_description="SGN-E306291 [cLEX-13-M11]">
      <seq>aattatggcttctctttttctatcgaaattttctttctttcttttactaataataataactttattttttcactcttctcattgtgatgtcctaacaagatgtcacatcacatcactttttcagttcggcgattctatcgcggatgctggaaacgtgatccgcatacctggtgccgtcatatcggcccaggcatggggtctaccttatggtgaaaccttttttcataaacctactggacgtttttctgacggtcgtattatcgctgactatatcgccacggctctcagtctcccattcctcaatccttacatggacaaatcaggtgtttcctttagtcaaggtgctaatttcgccgttgctggtgcaacggcgatgaataactcttttttggaggagaggggcattggacatgtcccgttcaacgttcctctcccgagtcaattagagtggtttaaatctcacctccagtcaacctatgggtcaaaatattctacaactctacg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0093P12-2lNi1/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0093P12.2" temp_strand="+" temp_description="C12HBa0093P12.2  AC209662.1 htgs_phase:3 submitted_to_sgn_as:C12HBa0093P12 upload_account_name:italy">
        <position start="19592" stop="20695"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19892" g_stop="20395" g_length="504"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="504" r_length="504" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0093P12.2" gen_strand="+" ref_id="SGN-E306291" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>504</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0093P12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E306291" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19892" e_stop="20395"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATTATGGCTTCTCTTTTTCTATCGAAATTTTCTTTCTTTCTTTTACTAATAATAATAACTTTATTTTTTCACTCTTCTCATTGTGATGTCCTAACAAGATGTCACATCACATCACTTTTTCAGTTCGGCGATTCTATCGCGGATGCTGGAAACGTGATCCGCATACCTGGTGCCGTCATATCGGCCCAGGCATGGGGTCTACCTTATGGTGAAACCTTTTTTCATAAACCTACTGGACGTTTTTCTGACGGTCGTATTATCGCTGACTATATCGCCACGGCTCTCAGTCTCCCATTCCTCAATCCTTACATGGACAAATCAGGTGTTTCCTTTAGTCAAGGTGCTAATTTCGCCGTTGCTGGTGCAACGGCGATGAATAACTCTTTTTTGGAGGAGAGGGGCATTGGACATGTCCCGTTCAACGTTCCTCTCCCGAGTCAATTAGAGTGGTTTAAATCTCACCTCCAGTCAACCTATGGGTCAAAATATTCTACAACTCTACG</genome_strand>
        <mrna_strand>AATTATGGCTTCTCTTTTTCTATCGAAATTTTCTTTCTTTCTTTTACTAATAATAATAACTTTATTTTTTCACTCTTCTCATTGTGATGTCCTAACAAGATGTCACATCACATCACTTTTTCAGTTCGGCGATTCTATCGCGGATGCTGGAAACGTGATCCGCATACCTGGTGCCGTCATATCGGCCCAGGCATGGGGTCTACCTTATGGTGAAACCTTTTTTCATAAACCTACTGGACGTTTTTCTGACGGTCGTATTATCGCTGACTATATCGCCACGGCTCTCAGTCTCCCATTCCTCAATCCTTACATGGACAAATCAGGTGTTTCCTTTAGTCAAGGTGCTAATTTCGCCGTTGCTGGTGCAACGGCGATGAATAACTCTTTTTTGGAGGAGAGGGGCATTGGACATGTCCCGTTCAACGTTCCTCTCCCGAGTCAATTAGAGTGGTTTAAATCTCACCTCCAGTCAACCTATGGGTCAAAATATTCTACAACTCTACG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-k0pWa0/sgn_ests_tomato_potato" ref_id="SGN-E305486" ref_strand="+" ref_description="SGN-E305486 [cLEX-15-D6]">
      <seq>gaaattttgtttctttcttttactaataataataactttattttttcactcttctcattgtgatgtcctaacaagatgtcacatcacatcactttttcagttcggcgattctatcgcggatgctggaaacgtgatccgcatacctggtgccgtcatatcggcccaggcatggggtctaccttatggtgaaaccttttttcataaacctactggacgtttttctgacggtcggatgatcgctgactatatcgccacggctctcagtctcccattcctcaatccttacatggacaaatcaagtgtttcctttagtcaaggtgctaatttcgccgttgctggtgcaacggcgatgaataactcttttttggaggagaggggcattggacatgtcccgttcaacgttcctctcccgagtcaattagagcggtttaaatctcacctccagacaacctatgggtcaaaatattctacaactgtacgaaactctcttgtagtattaggagagtttggtggaattgattattggaatgctttancgggaaataaacctgaacctgaggtacgtacgtacgtaccttttattattga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0093P12-2lNi1/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0093P12.2" temp_strand="+" temp_description="C12HBa0093P12.2  AC209662.1 htgs_phase:3 submitted_to_sgn_as:C12HBa0093P12 upload_account_name:italy">
        <position start="19616" stop="20803"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19916" g_stop="20503" g_length="588"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="588" r_length="588" r_score="0.985"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0093P12.2" gen_strand="+" ref_id="SGN-E305486" ref_strand="+">
        <total_alignment_score>0.985</total_alignment_score>
        <cumulative_length_of_scored_exons>588</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0093P12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E305486" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19916" e_stop="20503"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAATTTTCTTTCTTTCTTTTACTAATAATAATAACTTTATTTTTTCACTCTTCTCATTGTGATGTCCTAACAAGATGTCACATCACATCACTTTTTCAGTTCGGCGATTCTATCGCGGATGCTGGAAACGTGATCCGCATACCTGGTGCCGTCATATCGGCCCAGGCATGGGGTCTACCTTATGGTGAAACCTTTTTTCATAAACCTACTGGACGTTTTTCTGACGGTCGTATTATCGCTGACTATATCGCCACGGCTCTCAGTCTCCCATTCCTCAATCCTTACATGGACAAATCAGGTGTTTCCTTTAGTCAAGGTGCTAATTTCGCCGTTGCTGGTGCAACGGCGATGAATAACTCTTTTTTGGAGGAGAGGGGCATTGGACATGTCCCGTTCAACGTTCCTCTCCCGAGTCAATTAGAGTGGTTTAAATCTCACCTCCAGTCAACCTATGGGTCAAAATATTCTACAACTCTACGAAACTCTCTTGTAGTATTAGGAGAGTTTGGTGGAGTTGATTATTGGAATGCTTTAGCGGGAAATAAACCTGAACCTGAGGTACGTACGTACGTACCTTTTATTATTGA</genome_strand>
        <mrna_strand>GAAATTTTGTTTCTTTCTTTTACTAATAATAATAACTTTATTTTTTCACTCTTCTCATTGTGATGTCCTAACAAGATGTCACATCACATCACTTTTTCAGTTCGGCGATTCTATCGCGGATGCTGGAAACGTGATCCGCATACCTGGTGCCGTCATATCGGCCCAGGCATGGGGTCTACCTTATGGTGAAACCTTTTTTCATAAACCTACTGGACGTTTTTCTGACGGTCGGATGATCGCTGACTATATCGCCACGGCTCTCAGTCTCCCATTCCTCAATCCTTACATGGACAAATCAAGTGTTTCCTTTAGTCAAGGTGCTAATTTCGCCGTTGCTGGTGCAACGGCGATGAATAACTCTTTTTTGGAGGAGAGGGGCATTGGACATGTCCCGTTCAACGTTCCTCTCCCGAGTCAATTAGAGCGGTTTAAATCTCACCTCCAGACAACCTATGGGTCAAAATATTCTACAACTGTACGAAACTCTCTTGTAGTATTAGGAGAGTTTGGTGGAATTGATTATTGGAATGCTTTANCGGGAAATAAACCTGAACCTGAGGTACGTACGTACGTACCTTTTATTATTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-k0pWa0/sgn_ests_tomato_potato" ref_id="SGN-E543825" ref_strand="+" ref_description="SGN-E543825 [TUS-65-N12]">
      <seq>tttttttttttacaacacaacaattatcttttctcattattcatattcatttcaaactacaacacatttcatcaaaatcaacgaactcaagtacaaagaaaatcatgaaaaagacacccaaataaccaaaacaaattaaacaaaaaccttaaaaattcaataactagataatgcactcgaatttctaagtccataacacccaaattttggaagcatattgttgataacaacgttagaaatacgatgatacgcttcatctgtcagatgaagcccgtcccaattaacgtattgggacgggttaggacatacattggtactagctgaactacatcccccggcattgtatcgtcctccgctcccacaacatgccgataccaatgtacttggattaaatcccaaccaagacgcgtatcgaaaaacaagcctaaaaccaccatagtaatccccatacacaattttaacacgtgggaactcacatcgtagattttctagagccttctttagctcgatattatgatacgtagcgaaatcattataaaatttcaaacaaccatattgatcataagcatttggattcgtgtcagcgaatcttgttagatatgatgatagacacccaaaaggaaaaactcctggaaccaaaattcgagttgatcctaattggatcacctctttgatggcacttataatgccatcaataataaaaggtacgtacgtacgtacctcaggttcaggtttatttcccgctaaagcattccaataatcaactcccacaaactctcctaatactacaagagagttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0093P12-2lNi1/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0093P12.2" temp_strand="-" temp_description="C12HBa0093P12.2  AC209662.1 htgs_phase:3 submitted_to_sgn_as:C12HBa0093P12 upload_account_name:italy">
        <position start="21485" stop="20096"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="21185" g_stop="20396" g_length="790"/>
          <reference_exon_boundary r_type="cDNA" r_start="10" r_stop="799" r_length="790" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0093P12.2" gen_strand="-" ref_id="SGN-E543825" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>790</cumulative_length_of_scored_exons>
        <coverage percentage="0.989" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0093P12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E543825" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="21185" e_stop="20396"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTACAACACAACAATTATCTTTTCTCATTATTCATATTCATTTCAAACTACAACACATTTCATCAAAATCAACGAACTCAAGTACAAAGAAAATCATGAAAAAGACACCCAAATAACCAAAACAAATTAAACAAAAACCTTAAAAATTCAATAACTAGATAATGCACTCGAATTTCTAAGTCCATAACACCCAAATTTTGGAAGCATATTGTTGATAACAACGTTAGAAATACGATGATACGCTTCATCTGTCAGATGAAGCCCGTCCCAATTAACGTATTGGGACGGGTTAGGACATACATTGGTACTAGCTGAACTACATCCCCCGGCATTGTATCGTCCTCCGCTCCCACAACATGCCGATACCAATGTACTTGGATTAAATCCCAACCAAGACGCGTATCGAAAAACAAGCCTAAAACCACCATAGTAATCCCCATACACAATTTTAACACGTGGGAACTCACATCGTAGATTTTCTAGAGCCTTCTTTAGCTCGATATTATGATACGTAGCGAAATCATTATAAAATTTCAAACAACCATATTGATCATAAGCATTTGGATTCGTGTCAGCGAATCTTGTTAGATATGATGATAGACACCCAAAAGGAAAAACTCCTGGAACCAAAATTCGAGTTGATCCTAATTGGATCACCTCTTTGATGGCACTTATAATGCCATCAATAATAAAAGGTACGTACGTACGTACCTCAGGTTCAGGTTTATTTCCCGCTAAAGCATTCCAATAATCAACTCCACCAAACTCTCCTAATACTACAAGAGAGTTT</genome_strand>
        <mrna_strand>TTACAACACAACAATTATCTTTTCTCATTATTCATATTCATTTCAAACTACAACACATTTCATCAAAATCAACGAACTCAAGTACAAAGAAAATCATGAAAAAGACACCCAAATAACCAAAACAAATTAAACAAAAACCTTAAAAATTCAATAACTAGATAATGCACTCGAATTTCTAAGTCCATAACACCCAAATTTTGGAAGCATATTGTTGATAACAACGTTAGAAATACGATGATACGCTTCATCTGTCAGATGAAGCCCGTCCCAATTAACGTATTGGGACGGGTTAGGACATACATTGGTACTAGCTGAACTACATCCCCCGGCATTGTATCGTCCTCCGCTCCCACAACATGCCGATACCAATGTACTTGGATTAAATCCCAACCAAGACGCGTATCGAAAAACAAGCCTAAAACCACCATAGTAATCCCCATACACAATTTTAACACGTGGGAACTCACATCGTAGATTTTCTAGAGCCTTCTTTAGCTCGATATTATGATACGTAGCGAAATCATTATAAAATTTCAAACAACCATATTGATCATAAGCATTTGGATTCGTGTCAGCGAATCTTGTTAGATATGATGATAGACACCCAAAAGGAAAAACTCCTGGAACCAAAATTCGAGTTGATCCTAATTGGATCACCTCTTTGATGGCACTTATAATGCCATCAATAATAAAAGGTACGTACGTACGTACCTCAGGTTCAGGTTTATTTCCCGCTAAAGCATTCCAATAATCAACTCCCACAAACTCTCCTAATACTACAAGAGAGTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-k0pWa0/sgn_ests_tomato_potato" ref_id="SGN-E301519" ref_strand="+" ref_description="SGN-E301519 [cLEW-23-E2]">
      <seq>tttaatacacattttcaatgatgaaagggagatatttaaacttttaataccgaaagggcatggtctagctatcaatgaagtgagtgaattatgagtgatcgtgattcaaatctcggcagaaacaaaaaaaaaacacaatttcttcacgtgtgttgacattggttgataaagttacttgatactgtagtaagaagtactaggcatccgatggaacatcgaggtatgtgcaagctgatgaccctaaacatatcattagttatcaaagacttaaaattgtaatccaaccaaatataccatatgcttcttattggggatgtttaaaaaaaaaagacgttctaccttcacgagctaggggtaaagtgtacgtacactctatcctctcctaaccccacctatgagattacattgggtacgttgttgttgcttcttagtgggacaccttaggaataaatagcttttcttcctttcaaacctttcacccagttaaaataccaatcaatcaattataccacaatattacaatatacaagtatctaacttgactagtatacaagtgtgataataacaactagaacttcatataaccaacaactcctcctatgtgaggttcacatggttggtctcaagttcgaatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0093P12-2lNi1/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0093P12.2" temp_strand="+" temp_description="C12HBa0093P12.2  AC209662.1 htgs_phase:3 submitted_to_sgn_as:C12HBa0093P12 upload_account_name:italy">
        <position start="22955" stop="24189"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="23255" g_stop="23889" g_length="635"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="635" r_length="635" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0093P12.2" gen_strand="+" ref_id="SGN-E301519" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>635</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0093P12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E301519" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="23255" e_stop="23889"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTAATACACATTTTCAATGATGAAAGGGAGATATTTAAACTTTTAATACCGAAAGGGCATGGTCTAGCTATCAATGAAGTGAGTGAATTATGAGTGATCGTGATTCAAATCTCGGCAGAAACAAAAAAAAAACACAATTTCTTCACGTGTGTTGACATTGGTTGATAAAGTTACTTGATACTGTAGTAAGAAGTACTAGGCATCCGATGGAACATCGAGGTATGTGCAAGCTGATGACCCTAAACATATCATTAGTTATCAAAGACTTAAAATTGTAATCCAACCAAATATACCATATGCTTCTTATTGGGGATGTTTAAAAAAAAAAGACGTTCTACCTTCACGAGCTAGGGGTAAAGTGTACGTACACTCTATCCTCTCCTAACCCCACCTATGAGATTACATTGGGTACGTTGTTGTTGCTTCTTAGTGGGACACCTTAGGAATAAATAGCTTTTCTTCCTTTCAAACCTTTCACCCAGTTAAAATACCAATCAATCAATTATACCACAATATTACAATATACAAGTATCTAACTTGACTAGTATACAAGTGTGATAATAACAACTAGAACTTCATATAACCAACAACTCCTCCTATGTGAGGTTCACATGGTTGGTCTCAAGTTCGAATG</genome_strand>
        <mrna_strand>TTTAATACACATTTTCAATGATGAAAGGGAGATATTTAAACTTTTAATACCGAAAGGGCATGGTCTAGCTATCAATGAAGTGAGTGAATTATGAGTGATCGTGATTCAAATCTCGGCAGAAACAAAAAAAAAACACAATTTCTTCACGTGTGTTGACATTGGTTGATAAAGTTACTTGATACTGTAGTAAGAAGTACTAGGCATCCGATGGAACATCGAGGTATGTGCAAGCTGATGACCCTAAACATATCATTAGTTATCAAAGACTTAAAATTGTAATCCAACCAAATATACCATATGCTTCTTATTGGGGATGTTTAAAAAAAAAAGACGTTCTACCTTCACGAGCTAGGGGTAAAGTGTACGTACACTCTATCCTCTCCTAACCCCACCTATGAGATTACATTGGGTACGTTGTTGTTGCTTCTTAGTGGGACACCTTAGGAATAAATAGCTTTTCTTCCTTTCAAACCTTTCACCCAGTTAAAATACCAATCAATCAATTATACCACAATATTACAATATACAAGTATCTAACTTGACTAGTATACAAGTGTGATAATAACAACTAGAACTTCATATAACCAACAACTCCTCCTATGTGAGGTTCACATGGTTGGTCTCAAGTTCGAATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-k0pWa0/sgn_ests_tomato_potato" ref_id="SGN-E420940" ref_strand="-" ref_description="SGN-E420940 [STM-32-C5]">
      <seq>ggatcaatgcaagtgtcatcagtatcaacagcttttcaaagatgatcaaactgttaacgccatcggtggaaggtccattgttaatcttctgtcacttggtcatacttcaacttcatctcaagcaaccgtgggaacatcagggaatcagttagccagaaatcacgaggggcacaagtatcaacctttagacaatattcagcttgaaattggtgttgtgaccggaaattggggttgtggtgcttttggaggagatcctcaacttaaagctatgcttcaatggattgctgcatctcaggcaatgagacctttcatcttgtattatacatttggactggaagcattgcagatgctggagcaggtgattcaatggattgtttcacataagtggactgcaggggagctttggaatgtgttggtggaatactcatctcagagattgagggaagaaactagagtaggcttcttcaattggccccttccttcattgtcttctcacgatgacacgctcaacgattcctatgatgatcgaacatgttcgtgctgttaagcttaataatgttgcttgatccttgtatatgccatttcattgtactgtattataaggtgagatgtgtcgccatggttctatctttatgctgactgtcaacctactgcattcgaacttgagaccgaccatgtgaacctcccataggaggagttgttggttagatgaagttctagttgttattattacacttatactctagtcaagttagatacttgtatattgtaatattgtggtataattgattgattggtatctaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0093P12-2lNi1/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0093P12.2" temp_strand="-" temp_description="C12HBa0093P12.2  AC209662.1 htgs_phase:3 submitted_to_sgn_as:C12HBa0093P12 upload_account_name:italy">
        <position start="25792" stop="23438"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="25492" g_stop="25402" g_length="91"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="91" r_length="91" r_score="0.945"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="25401" i_stop="25285" i_length="117">
            <donor d_prob="0.994" d_score="0.94"/>
            <acceptor a_prob="0.972" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="25284" g_stop="25084" g_length="201"/>
          <reference_exon_boundary r_type="cDNA" r_start="92" r_stop="295" r_length="204" r_score="0.896"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="25083" i_stop="24414" i_length="670">
            <donor d_prob="0.929" d_score="0.98"/>
            <acceptor a_prob="0.929" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="24413" g_stop="24351" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="296" r_stop="358" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="24350" i_stop="24185" i_length="166">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.828" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="24184" g_stop="23725" g_length="460"/>
          <reference_exon_boundary r_type="cDNA" r_start="359" r_stop="818" r_length="460" r_score="0.928"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0093P12.2" gen_strand="-" ref_id="SGN-E420940" ref_strand="-">
        <total_alignment_score>0.928</total_alignment_score>
        <cumulative_length_of_scored_exons>815</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0093P12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E420940" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="25492" e_stop="25402"/>
          <exon e_start="25284" e_stop="25084"/>
          <exon e_start="24413" e_stop="24351"/>
          <exon e_start="24184" e_stop="23725"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGATCAATGCAAATGTCATCAGTATCAACAGCTCTTCAAAGATGATCAAACTGTTAACTCCACCGGTGGGAGGTCCATTGTTAATCTTCTGGTAGGATTTCCTTTTGTCATTTTTTAAATCTTCCTCAGTTTGTTATTTCCTTTTGCTCCCCTTCCAATATCTCTATAGGTATTTCAATTTTTTCCTTTTCTTAATTGTCTCTGATAGTCACTTGGTCATACTTCAACTTCATCTCAAGCAACCGAGGGAGCATCGGGGAATCATTTAGCCAGAAATCACAAGGGGCACCGTTGTCCACCTTTAGAC---AGTCAGCAGGAAATTGGTGTTGTGACTGGAAATTGGGGTTGTGGTGCTTTTGGAGGAGATCCTCAACTTAAAGCAATGCTTCAATGGATTGCTGCATCTCAGGTTGTTCATTCTCCTTGGACATTTTCCTGCATTTGTATGCGGGAAGTATTGGCTCATGCGAGAAGGCACAGAGCACTCGCTTTTCACCTATTAGGGGATAATGTACTTGGTAAATCTAGGCGCATTCTATTTTTCTCTACTTTTGAGACGCATCGTAGTTTTAAGGCATAATACATAAATAGACACTCAAACTTCAGGTAATTACTTTGACTTTGAGAGTGCACATCTAGACACCTCAACTTGGTCTCAACTGATAACTAAACACCCCAACTCATCGCCACTGTCTCATGGACACCCATCACTGGCGTGTCACATAAATTTTGGAGGTATTCAGAGGATCGTTTTGTAAGTTTGAGTGTTCAACTGACACAATTGAGATGAGTTGAGGTGCCTAGATATGCATACTCAAAGTTGGAGTGTTTATTTGCCATATGAGGTCAAGACTGCTTATGTATTATGCCTACTTTTTAACTTGAGGTTAATAATCTTTGAATTCTTGATACTTGTAATGGTCTATGCTTCATTGCTACTTGTAAATTGTGCTAGACGTTTAAAAGCTTTCGGAAAGGGAAAATGATGTCATACAGACAGAGATGGAGGCGATAAAATGTCAAAATATCAAATATCTTCTTTTAGATGTTCATTTCACTTTGAACATCTTCTCCTACAGGCAATGAGACCTTTCATCTTGTATTATACATTTGGACTGGAAGCATTGCAGATGCTGGAGCAGGTACTTTCTGTCTGTTAATCATTTTATAATGTGTCTGGTGTGAAGTTTCATTCGACTTTGAACTGATATGTTTAATCCTAGGATGTTTGCCGATTTGTTATAGTTTCTGAAAGCCTTGGAAGCTTATATCAGCGTGTGACGTTTCTATGTTGAAAACTTGGTCTAGGTGATTCAATGGATTGTTTCACATAAGTGGACTGCAGGGGAGCTTTGGAATGTGTTGGTGGAATACTCTTCTCAGAGATTGAGGGAAGAAACTAGAGTAGGCTTCTTCAATTGGCTCCTTCCATCATTGTCTTCTCATGATGACATGCTCAACGATTCCTATGATGATCGGACATGTTCATGCTGTTAAGCTTAATAATGTTGCTCGATCCATGTATACGCCATTCCATTGTACTGTATTATAAGGTAAGATGTGTCGTCATGGTTCTATCTTTATGTTGACTGTCAACCTACTGCATTCGAACTTGAGACCAACCATGTGAACCTCACATAGGAGGAGTTGTTGGTTATATGAAGTTCTAGTTGTTATTATCACACTTGTATACTAGTCAAGTTAGATACTTGTATATTGTAATATTGTGGTATAATTGATTGATTGGTATTTTAACTGGGTGAAAGGT</genome_strand>
        <mrna_strand>GGATCAATGCAAGTGTCATCAGTATCAACAGCTTTTCAAAGATGATCAAACTGTTAACGCCATCGGTGGAAGGTCCATTGTTAATCTTCTG.....................................................................................................................TCACTTGGTCATACTTCAACTTCATCTCAAGCAACCGTGGGAACATCAGGGAATCAGTTAGCCAGAAATCACGAGGGGCACAAGTATCAACCTTTAGACAATATTCAGCTTGAAATTGGTGTTGTGACCGGAAATTGGGGTTGTGGTGCTTTTGGAGGAGATCCTCAACTTAAAGCTATGCTTCAATGGATTGCTGCATCTCAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAATGAGACCTTTCATCTTGTATTATACATTTGGACTGGAAGCATTGCAGATGCTGGAGCAG......................................................................................................................................................................GTGATTCAATGGATTGTTTCACATAAGTGGACTGCAGGGGAGCTTTGGAATGTGTTGGTGGAATACTCATCTCAGAGATTGAGGGAAGAAACTAGAGTAGGCTTCTTCAATTGGCCCCTTCCTTCATTGTCTTCTCACGATGACACGCTCAACGATTCCTATGATGATCGAACATGTTCGTGCTGTTAAGCTTAATAATGTTGCTTGATCCTTGTATATGCCATTTCATTGTACTGTATTATAAGGTGAGATGTGTCGCCATGGTTCTATCTTTATGCTGACTGTCAACCTACTGCATTCGAACTTGAGACCGACCATGTGAACCTCCCATAGGAGGAGTTGTTGGTTAGATGAAGTTCTAGTTGTTATTATTACACTTATACTCTAGTCAAGTTAGATACTTGTATATTGTAATATTGTGGTATAATTGATTGATTGGTATCTAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-k0pWa0/sgn_ests_tomato_potato" ref_id="SGN-E482830" ref_strand="+" ref_description="SGN-E482830 [cSTE-5-B18]">
      <seq>cgatggagagtgttcttctaatggagaagagagaagaccttgaagtcaattcttccatttttacccttttcacctccgatcatcttcacttttttggccggcgccggtagttgaagcacttaccgatctctcgaaaggcccttcatcacagcaaaattgactccggcgaagtcctcttcattcgccatttccgatattcgaaactctctcttccctccacgatttttcaattgatacttctgcttctcaagttgcttcctagggatgaagctgcaaaagggttcgaagaagtggtgccacaattggctaacttgcttttgagattgccttcattgctagaaactcattatgagaatgctgatgatggagttttgaaaggagttaaaaccggtcttcgcttgttggaatcacaagagcctggcactgtctttcttagtcaggaattaatcggtgctcttcttgcatgcgcgttgttttgtctatttcctaccagtcatagaggtgccaaacatcttccaatgatcaacttcgatcacttatttgcgtgtctacatgatcattatgaagaagcattcaaaaataaattgaagtgcattgttcactattttgggaggatatgttcatctatacccgtngggctttgtgtcgtttgagcgaaaggtttctttctttagaatatagtcccatcttgtattccctatccaaaggaaaattatggagccagtccatatttccctttgccattttgagatttctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0093P12-2lNi1/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0093P12.2" temp_strand="-" temp_description="C12HBa0093P12.2  AC209662.1 htgs_phase:3 submitted_to_sgn_as:C12HBa0093P12 upload_account_name:italy">
        <position start="30252" stop="27697"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29943" g_stop="29714" g_length="230"/>
          <reference_exon_boundary r_type="cDNA" r_start="17" r_stop="251" r_length="235" r_score="0.900"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="29713" i_stop="29246" i_length="468">
            <donor d_prob="0.733" d_score="0.88"/>
            <acceptor a_prob="0.999" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29245" g_stop="29057" g_length="189"/>
          <reference_exon_boundary r_type="cDNA" r_start="252" r_stop="440" r_length="189" r_score="0.968"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="29056" i_stop="28645" i_length="412">
            <donor d_prob="0.980" d_score="0.96"/>
            <acceptor a_prob="0.924" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="28644" g_stop="28541" g_length="104"/>
          <reference_exon_boundary r_type="cDNA" r_start="441" r_stop="544" r_length="104" r_score="0.962"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="28540" i_stop="28204" i_length="337">
            <donor d_prob="0.981" d_score="0.96"/>
            <acceptor a_prob="0.980" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="28203" g_stop="27999" g_length="205"/>
          <reference_exon_boundary r_type="cDNA" r_start="545" r_stop="750" r_length="206" r_score="0.883"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="27998" i_stop="27916" i_length="83">
            <donor d_prob="0.997" d_score="0.90"/>
            <acceptor a_prob="0.986" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="27915" g_stop="27909" g_length="7"/>
          <reference_exon_boundary r_type="cDNA" r_start="751" r_stop="757" r_length="7" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0093P12.2" gen_strand="-" ref_id="SGN-E482830" ref_strand="+">
        <total_alignment_score>0.922</total_alignment_score>
        <cumulative_length_of_scored_exons>735</cumulative_length_of_scored_exons>
        <coverage percentage="0.971" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0093P12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E482830" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29943" e_stop="29714"/>
          <exon e_start="29245" e_stop="29057"/>
          <exon e_start="28644" e_stop="28541"/>
          <exon e_start="28203" e_stop="27999"/>
          <exon e_start="27915" e_stop="27909"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTAATGGAGAACAGAGAAGA-CTTGAAGTCAATTCTTCCATTTTTACCCTTTTCA-CTCCGATCATCTTCACTTTTTTGGCCGGCGCCGGTAACTGAAGCACTTACCGATATCTCGAAAGGTCC-TAATCACAGCAAAATTGACTCCGGCGAAGGCCTATTCA-TCGCCATTTCCGATATTCGAAACTCTCTC-TCGTTCCACAGTTTTTCAATTGATACTTCTGCTTCTCAAGGTTTTGCTCTGTTCTTCGATGATGTAAATTTCGTTTCCCATAATTCTCTGTTCATGAACATATAAATTTCATTTTTTTTTTGTTTTAAAGTATAGTATTAGTTTGTTGTTTCGATTCTTAATTTGAAAAGATACTATTAGTGCAATAATTTGTGTTTGATCGATGTTGATAGGTTGTGAAAAAAAGTTTCTATTTTTTATTATCGTGATTTATAGTACGTTTTCAAATAGATTGAGGTTTTTATGTCCGAATTTCGTTTGCTTGTGCACTCTGAATAAAGGCAAATAAATTTAAACGGAGGGAGAAGGAGTGTTGTTTTTCGTAAGATCTTGGCCGAACACCTCGATTCTTTAAAAATAAACACTTTTGACTTCTCAAAAACTTGATCGAACAAGCTACTGGTTTATTATGAAAAAAAAAAGTTTGAACTGATACGATTGTTTACTAAATGCTGAATTGTTTGTGCAGTTGCTTCCTAGGGATGAAGCTGCAAAATGGTTCGAAGAAGTGGTACCACAATTGGCTAAGTTGCTTTTGAGATTGCCTTTATTGCTAGAAACTCATTATGAGAATGCTGATGATGGAGTTTTGAAAGGAGTTAAAACCGGTCTTCGCTTGTTGGAATCACAAGAGCCTGGCATTGTCTTCCTTAGTCAGGTAGTAGTTTAGAATTTTATGTATGTATGTATATACTATATGTTAACTCTCCTTATTTTTTTACGTCTGTCTAGTTTTGATATTGTGATACGCCTTAGTAACACTCCTGGCTCCGTCACTGTGGGTTGGTGTGGTTGTGGTCAATAAGCAGGCAGGAAAGAGTTATCCTACTTTAAAGCAATTAACTTTAAGTTTAAGCGATGAGGAATCCCATTTCTAGATTTCTTCCTGTACCTAATACACACAAATGAGTTCATGTCACAGCCTGAGATTCGTATGGGATACTCAACAATTAATTTGTTTCATACCTCTTTTACCCCTTTAACTGATTTCTGCAGCAGAATTTGATTATTCGATGTTGTAACAAGTATCTGTAGCATTAATTTTCATGGTTTTCAATCTTTTTTTCCAGGAACTAATTGGTGCTCTTCTTGCATGCGCGTTGTTTTGTCTATTTCCTACCAGTCATAGAGGTGCCAAACACCTTCCAATGATCAACTTTGATCACTTATTTGCGTATGTTTCATCAACTGTCTGATATGATTGTTGCATCTATGCTTGTTTTCTGTTCATATCTCTATATGAGTTGTTATAATCTGAAAACTTGACATAACTTCTCTATCTTAGGATACGGTTTAGATAAATAGTTTCATTAGGTTGATAATTAGATTGTAAGGTCTTAATTGAATAATTTTTATCTACAATTGTTAACTAGAATGAGTTATACAGAGTTGAAGAATAAGAACAGATCAATTATTTTGTACTCTTCCGTAGTGGCACTTCGGTCTTTAAATATCTCAAACTGTGTTAATCGAATTAATGAAGTTCATGTGCTGCCATACATGTTTTTCAGGTGTCTACATGATCATTATGAAGAAGCATTCGATAATAAATTGAAGTGCATTGTTCACTATTTTGGGAGGATATGTTCATCTATGCCAG-CAGGCTATGTGTCTTTCGAGCGAAAAG-TTCTTTCTTTACAATTTAGT-CCATCTTGTATTCCTTATCCAAAGGAAAAATTATGGAGCCAATCCAATATTTCCCTTTGTCATTATGAGGTAAGAAGTGAAACTGTAATCTCAATCCAGTTATCATGTCTCTTTTTTCTCACATGCCATGATATCATTCTGTTTATTTTTAGATTTCTG</genome_strand>
        <mrna_strand>TCTAATGGAGAAGAGAGAAGACCTTGAAGTCAATTCTTCCATTTTTACCCTTTTCACCTCCGATCATCTTCACTTTTTTGGCCGGCGCCGGTAGTTGAAGCACTTACCGATCTCTCGAAAGGCCCTTCATCACAGCAAAATTGACTCCGGCGAAGTCCTCTTCATTCGCCATTTCCGATATTCGAAACTCTCTCTTCCCTCCACGATTTTTCAATTGATACTTCTGCTTCTCAAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCTTCCTAGGGATGAAGCTGCAAAAGGGTTCGAAGAAGTGGTGCCACAATTGGCTAACTTGCTTTTGAGATTGCCTTCATTGCTAGAAACTCATTATGAGAATGCTGATGATGGAGTTTTGAAAGGAGTTAAAACCGGTCTTCGCTTGTTGGAATCACAAGAGCCTGGCACTGTCTTTCTTAGTCAG............................................................................................................................................................................................................................................................................................................................................................................................................................GAATTAATCGGTGCTCTTCTTGCATGCGCGTTGTTTTGTCTATTTCCTACCAGTCATAGAGGTGCCAAACATCTTCCAATGATCAACTTCGATCACTTATTTGC.................................................................................................................................................................................................................................................................................................................................................GTGTCTACATGATCATTATGAAGAAGCATTCAAAAATAAATTGAAGTGCATTGTTCACTATTTTGGGAGGATATGTTCATCTATACCCGTNGGGCTTTGTGTCGTTTGAGCGAAAGGTTTCTTTCTTTAGAATATAGTCCCATCTTGTATTCCCTATCCAAAGG-AAAATTATGGAGCCAGTCC-ATATTTCCCTTTGCCATTTTGAG...................................................................................ATTTCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-k0pWa0/sgn_ests_tomato_potato" ref_id="SGN-E406990" ref_strand="+" ref_description="SGN-E406990 [PPI-5-N1]">
      <seq>gagaagagagaagacttgaagtcaattcttccatttttacccttttcactccgatcatcttcacttttttggccggcgccggtagttgaagcacttaccgatctctcgaaaggccctcatcacagcaaaattgactccggcgaagtcctcttcatcgccatttccgatattcgaaactctctctccctccacgatttttcaattgatacttctgcttctcaaggttttgctctgttcttcgatgatttgcttcctagggatgaagctgcaaaagggttcgaagaagtggtgccacaattggctaacttgcttttgagattgccttcattgctagaaactcattatgagaatgctgatgatggagttttgaaaggagttaaaaccggtcttcgcttgttggaatcacaagagcctggcactgtctttcttagtcaggaattaatcggtgctcttcttgcatgcgcgttgttttgtctatttcctaccagtcatagaggtgccaaacatcttccaatgatcaacttcgatcacttatttgcgtgtctacatgatcattatgaagaagcattcaaaaataaattgaagtgcattgttcactattttgggaggatatgttcatctatacccgtgggctttgtgtcgtttgagcgaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0093P12-2lNi1/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0093P12.2" temp_strand="-" temp_description="C12HBa0093P12.2  AC209662.1 htgs_phase:3 submitted_to_sgn_as:C12HBa0093P12 upload_account_name:italy">
        <position start="30236" stop="27791"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29936" g_stop="29691" g_length="246"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="246" r_length="246" r_score="0.951"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="29690" i_stop="29246" i_length="445">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29245" g_stop="29057" g_length="189"/>
          <reference_exon_boundary r_type="cDNA" r_start="247" r_stop="435" r_length="189" r_score="0.968"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="29056" i_stop="28645" i_length="412">
            <donor d_prob="0.980" d_score="0.96"/>
            <acceptor a_prob="0.924" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="28644" g_stop="28541" g_length="104"/>
          <reference_exon_boundary r_type="cDNA" r_start="436" r_stop="539" r_length="104" r_score="0.962"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="28540" i_stop="28204" i_length="337">
            <donor d_prob="0.981" d_score="0.96"/>
            <acceptor a_prob="0.980" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="28203" g_stop="28091" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="540" r_stop="652" r_length="113" r_score="0.920"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0093P12.2" gen_strand="-" ref_id="SGN-E406990" ref_strand="+">
        <total_alignment_score>0.952</total_alignment_score>
        <cumulative_length_of_scored_exons>652</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0093P12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E406990" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29936" e_stop="29691"/>
          <exon e_start="29245" e_stop="29057"/>
          <exon e_start="28644" e_stop="28541"/>
          <exon e_start="28203" e_stop="28091"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGAACAGAGAAGACTTGAAGTCAATTCTTCCATTTTTACCCTTTTCACTCCGATCATCTTCACTTTTTTGGCCGGCGCCGGTAACTGAAGCACTTACCGATATCTCGAAAGGTCCTAATCACAGCAAAATTGACTCCGGCGAAGGCCTATTCATCGCCATTTCCGATATTCGAAACTCTCTCTCGTTCCACAGTTTTTCAATTGATACTTCTGCTTCTCAAGGTTTTGCTCTGTTCTTCGATGATGTAAATTTCGTTTCCCATAATTCTCTGTTCATGAACATATAAATTTCATTTTTTTTTTGTTTTAAAGTATAGTATTAGTTTGTTGTTTCGATTCTTAATTTGAAAAGATACTATTAGTGCAATAATTTGTGTTTGATCGATGTTGATAGGTTGTGAAAAAAAGTTTCTATTTTTTATTATCGTGATTTATAGTACGTTTTCAAATAGATTGAGGTTTTTATGTCCGAATTTCGTTTGCTTGTGCACTCTGAATAAAGGCAAATAAATTTAAACGGAGGGAGAAGGAGTGTTGTTTTTCGTAAGATCTTGGCCGAACACCTCGATTCTTTAAAAATAAACACTTTTGACTTCTCAAAAACTTGATCGAACAAGCTACTGGTTTATTATGAAAAAAAAAAGTTTGAACTGATACGATTGTTTACTAAATGCTGAATTGTTTGTGCAGTTGCTTCCTAGGGATGAAGCTGCAAAATGGTTCGAAGAAGTGGTACCACAATTGGCTAAGTTGCTTTTGAGATTGCCTTTATTGCTAGAAACTCATTATGAGAATGCTGATGATGGAGTTTTGAAAGGAGTTAAAACCGGTCTTCGCTTGTTGGAATCACAAGAGCCTGGCATTGTCTTCCTTAGTCAGGTAGTAGTTTAGAATTTTATGTATGTATGTATATACTATATGTTAACTCTCCTTATTTTTTTACGTCTGTCTAGTTTTGATATTGTGATACGCCTTAGTAACACTCCTGGCTCCGTCACTGTGGGTTGGTGTGGTTGTGGTCAATAAGCAGGCAGGAAAGAGTTATCCTACTTTAAAGCAATTAACTTTAAGTTTAAGCGATGAGGAATCCCATTTCTAGATTTCTTCCTGTACCTAATACACACAAATGAGTTCATGTCACAGCCTGAGATTCGTATGGGATACTCAACAATTAATTTGTTTCATACCTCTTTTACCCCTTTAACTGATTTCTGCAGCAGAATTTGATTATTCGATGTTGTAACAAGTATCTGTAGCATTAATTTTCATGGTTTTCAATCTTTTTTTCCAGGAACTAATTGGTGCTCTTCTTGCATGCGCGTTGTTTTGTCTATTTCCTACCAGTCATAGAGGTGCCAAACACCTTCCAATGATCAACTTTGATCACTTATTTGCGTATGTTTCATCAACTGTCTGATATGATTGTTGCATCTATGCTTGTTTTCTGTTCATATCTCTATATGAGTTGTTATAATCTGAAAACTTGACATAACTTCTCTATCTTAGGATACGGTTTAGATAAATAGTTTCATTAGGTTGATAATTAGATTGTAAGGTCTTAATTGAATAATTTTTATCTACAATTGTTAACTAGAATGAGTTATACAGAGTTGAAGAATAAGAACAGATCAATTATTTTGTACTCTTCCGTAGTGGCACTTCGGTCTTTAAATATCTCAAACTGTGTTAATCGAATTAATGAAGTTCATGTGCTGCCATACATGTTTTTCAGGTGTCTACATGATCATTATGAAGAAGCATTCGATAATAAATTGAAGTGCATTGTTCACTATTTTGGGAGGATATGTTCATCTATGCCAGCAGGCTATGTGTCTTTCGAGCGAA</genome_strand>
        <mrna_strand>GAGAAGAGAGAAGACTTGAAGTCAATTCTTCCATTTTTACCCTTTTCACTCCGATCATCTTCACTTTTTTGGCCGGCGCCGGTAGTTGAAGCACTTACCGATCTCTCGAAAGGCCCTCATCACAGCAAAATTGACTCCGGCGAAGTCCTCTTCATCGCCATTTCCGATATTCGAAACTCTCTCTCCCTCCACGATTTTTCAATTGATACTTCTGCTTCTCAAGGTTTTGCTCTGTTCTTCGATGAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCTTCCTAGGGATGAAGCTGCAAAAGGGTTCGAAGAAGTGGTGCCACAATTGGCTAACTTGCTTTTGAGATTGCCTTCATTGCTAGAAACTCATTATGAGAATGCTGATGATGGAGTTTTGAAAGGAGTTAAAACCGGTCTTCGCTTGTTGGAATCACAAGAGCCTGGCACTGTCTTTCTTAGTCAG............................................................................................................................................................................................................................................................................................................................................................................................................................GAATTAATCGGTGCTCTTCTTGCATGCGCGTTGTTTTGTCTATTTCCTACCAGTCATAGAGGTGCCAAACATCTTCCAATGATCAACTTCGATCACTTATTTGC.................................................................................................................................................................................................................................................................................................................................................GTGTCTACATGATCATTATGAAGAAGCATTCAAAAATAAATTGAAGTGCATTGTTCACTATTTTGGGAGGATATGTTCATCTATACCCGTGGGCTTTGTGTCGTTTGAGCGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-k0pWa0/sgn_ests_tomato_potato" ref_id="SGN-E420939" ref_strand="+" ref_description="SGN-E420939 [STM-32-C5]">
      <seq>gagaagagagaagacttgaagtcaattcttccatttttacccttttcactccgatcatcttcacttttttggccggcgccggtagttgaagcacttaccgatctctcgaaaggccctcatcacagcaaaattgactccggcgaagtcctcttcatcgccatttccgatattcgaaactctctctccctccacgatttttcaattgatacttctgcttctcaagggtttgctctgttcttcgatgatttgcttcctagggatgaagctgcaaaagggttcgaagaagtggtgccacaattggctaacttgcttttgagattgccttcattgctagaaactcattatgagaatgctgatgatggagttttgaaaggagttaaaaccggtcttcgcttgttggaatcacaagagcctggcactgtctttcttagtcaggaattaatcggtgctcttcttgcatgcgcgttgttttgtctatttcctaccagtcatagaggtgccaaacatcttccaatgatcaacttcgatcacttatttgcgtgtctacatgatcattatgaagaagcattcaaaaataaattgaagtgcattgttcactattttgggaggatatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0093P12-2lNi1/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0093P12.2" temp_strand="-" temp_description="C12HBa0093P12.2  AC209662.1 htgs_phase:3 submitted_to_sgn_as:C12HBa0093P12 upload_account_name:italy">
        <position start="30236" stop="27829"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29936" g_stop="29691" g_length="246"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="246" r_length="246" r_score="0.947"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="29690" i_stop="29246" i_length="445">
            <donor d_prob="0.991" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29245" g_stop="29057" g_length="189"/>
          <reference_exon_boundary r_type="cDNA" r_start="247" r_stop="435" r_length="189" r_score="0.968"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="29056" i_stop="28645" i_length="412">
            <donor d_prob="0.980" d_score="0.96"/>
            <acceptor a_prob="0.924" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="28644" g_stop="28541" g_length="104"/>
          <reference_exon_boundary r_type="cDNA" r_start="436" r_stop="539" r_length="104" r_score="0.962"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="28540" i_stop="28204" i_length="337">
            <donor d_prob="0.981" d_score="0.96"/>
            <acceptor a_prob="0.980" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="28203" g_stop="28129" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="540" r_stop="614" r_length="75" r_score="0.973"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0093P12.2" gen_strand="-" ref_id="SGN-E420939" ref_strand="+">
        <total_alignment_score>0.959</total_alignment_score>
        <cumulative_length_of_scored_exons>614</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0093P12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E420939" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29936" e_stop="29691"/>
          <exon e_start="29245" e_stop="29057"/>
          <exon e_start="28644" e_stop="28541"/>
          <exon e_start="28203" e_stop="28129"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGAACAGAGAAGACTTGAAGTCAATTCTTCCATTTTTACCCTTTTCACTCCGATCATCTTCACTTTTTTGGCCGGCGCCGGTAACTGAAGCACTTACCGATATCTCGAAAGGTCCTAATCACAGCAAAATTGACTCCGGCGAAGGCCTATTCATCGCCATTTCCGATATTCGAAACTCTCTCTCGTTCCACAGTTTTTCAATTGATACTTCTGCTTCTCAAGGTTTTGCTCTGTTCTTCGATGATGTAAATTTCGTTTCCCATAATTCTCTGTTCATGAACATATAAATTTCATTTTTTTTTTGTTTTAAAGTATAGTATTAGTTTGTTGTTTCGATTCTTAATTTGAAAAGATACTATTAGTGCAATAATTTGTGTTTGATCGATGTTGATAGGTTGTGAAAAAAAGTTTCTATTTTTTATTATCGTGATTTATAGTACGTTTTCAAATAGATTGAGGTTTTTATGTCCGAATTTCGTTTGCTTGTGCACTCTGAATAAAGGCAAATAAATTTAAACGGAGGGAGAAGGAGTGTTGTTTTTCGTAAGATCTTGGCCGAACACCTCGATTCTTTAAAAATAAACACTTTTGACTTCTCAAAAACTTGATCGAACAAGCTACTGGTTTATTATGAAAAAAAAAAGTTTGAACTGATACGATTGTTTACTAAATGCTGAATTGTTTGTGCAGTTGCTTCCTAGGGATGAAGCTGCAAAATGGTTCGAAGAAGTGGTACCACAATTGGCTAAGTTGCTTTTGAGATTGCCTTTATTGCTAGAAACTCATTATGAGAATGCTGATGATGGAGTTTTGAAAGGAGTTAAAACCGGTCTTCGCTTGTTGGAATCACAAGAGCCTGGCATTGTCTTCCTTAGTCAGGTAGTAGTTTAGAATTTTATGTATGTATGTATATACTATATGTTAACTCTCCTTATTTTTTTACGTCTGTCTAGTTTTGATATTGTGATACGCCTTAGTAACACTCCTGGCTCCGTCACTGTGGGTTGGTGTGGTTGTGGTCAATAAGCAGGCAGGAAAGAGTTATCCTACTTTAAAGCAATTAACTTTAAGTTTAAGCGATGAGGAATCCCATTTCTAGATTTCTTCCTGTACCTAATACACACAAATGAGTTCATGTCACAGCCTGAGATTCGTATGGGATACTCAACAATTAATTTGTTTCATACCTCTTTTACCCCTTTAACTGATTTCTGCAGCAGAATTTGATTATTCGATGTTGTAACAAGTATCTGTAGCATTAATTTTCATGGTTTTCAATCTTTTTTTCCAGGAACTAATTGGTGCTCTTCTTGCATGCGCGTTGTTTTGTCTATTTCCTACCAGTCATAGAGGTGCCAAACACCTTCCAATGATCAACTTTGATCACTTATTTGCGTATGTTTCATCAACTGTCTGATATGATTGTTGCATCTATGCTTGTTTTCTGTTCATATCTCTATATGAGTTGTTATAATCTGAAAACTTGACATAACTTCTCTATCTTAGGATACGGTTTAGATAAATAGTTTCATTAGGTTGATAATTAGATTGTAAGGTCTTAATTGAATAATTTTTATCTACAATTGTTAACTAGAATGAGTTATACAGAGTTGAAGAATAAGAACAGATCAATTATTTTGTACTCTTCCGTAGTGGCACTTCGGTCTTTAAATATCTCAAACTGTGTTAATCGAATTAATGAAGTTCATGTGCTGCCATACATGTTTTTCAGGTGTCTACATGATCATTATGAAGAAGCATTCGATAATAAATTGAAGTGCATTGTTCACTATTTTGGGAGGATATG</genome_strand>
        <mrna_strand>GAGAAGAGAGAAGACTTGAAGTCAATTCTTCCATTTTTACCCTTTTCACTCCGATCATCTTCACTTTTTTGGCCGGCGCCGGTAGTTGAAGCACTTACCGATCTCTCGAAAGGCCCTCATCACAGCAAAATTGACTCCGGCGAAGTCCTCTTCATCGCCATTTCCGATATTCGAAACTCTCTCTCCCTCCACGATTTTTCAATTGATACTTCTGCTTCTCAAGGGTTTGCTCTGTTCTTCGATGAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCTTCCTAGGGATGAAGCTGCAAAAGGGTTCGAAGAAGTGGTGCCACAATTGGCTAACTTGCTTTTGAGATTGCCTTCATTGCTAGAAACTCATTATGAGAATGCTGATGATGGAGTTTTGAAAGGAGTTAAAACCGGTCTTCGCTTGTTGGAATCACAAGAGCCTGGCACTGTCTTTCTTAGTCAG............................................................................................................................................................................................................................................................................................................................................................................................................................GAATTAATCGGTGCTCTTCTTGCATGCGCGTTGTTTTGTCTATTTCCTACCAGTCATAGAGGTGCCAAACATCTTCCAATGATCAACTTCGATCACTTATTTGC.................................................................................................................................................................................................................................................................................................................................................GTGTCTACATGATCATTATGAAGAAGCATTCAAAAATAAATTGAAGTGCATTGTTCACTATTTTGGGAGGATATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-k0pWa0/sgn_ests_tomato_potato" ref_id="SGN-E426530" ref_strand="+" ref_description="SGN-E426530 [STM-46-B2]">
      <seq>gagagtgttcttctaatggagaagagagaagacttgaagtcaattcttccatttttacccttttcactccgatcatcttcacttttttggccggcgccggtagttgaagcacttaccgatctctcgaaaggccctcatcacagcaaaattgactccggcgaagtcctcttcatcgccatttccgatattcgaaactctctctccctccacgatttttcaattgatacttctgcttctcaagttgcttcctagggatgaagctgcaaaagggttcgaagaagtggtgccacaattggctaacttgcttttgagattgccttcattgctagaaactcattatgagaatgctgatgatggagttttgaaaggagttaaaaccggtcttcgcttgttggaatcacaagagcctggcactgtctttcttagtcaggaattaatcggtgctcttcttgcatgcgcgttgttttgtctatttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0093P12-2lNi1/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0093P12.2" temp_strand="-" temp_description="C12HBa0093P12.2  AC209662.1 htgs_phase:3 submitted_to_sgn_as:C12HBa0093P12 upload_account_name:italy">
        <position start="30252" stop="28299"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29943" g_stop="29714" g_length="230"/>
          <reference_exon_boundary r_type="cDNA" r_start="12" r_stop="241" r_length="230" r_score="0.943"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="29713" i_stop="29246" i_length="468">
            <donor d_prob="0.733" d_score="0.92"/>
            <acceptor a_prob="0.999" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29245" g_stop="29057" g_length="189"/>
          <reference_exon_boundary r_type="cDNA" r_start="242" r_stop="430" r_length="189" r_score="0.968"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="29056" i_stop="28645" i_length="412">
            <donor d_prob="0.980" d_score="0.96"/>
            <acceptor a_prob="0.924" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="28644" g_stop="28599" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="431" r_stop="476" r_length="46" r_score="0.957"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0093P12.2" gen_strand="-" ref_id="SGN-E426530" ref_strand="+">
        <total_alignment_score>0.955</total_alignment_score>
        <cumulative_length_of_scored_exons>465</cumulative_length_of_scored_exons>
        <coverage percentage="0.977" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0093P12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E426530" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29943" e_stop="29714"/>
          <exon e_start="29245" e_stop="29057"/>
          <exon e_start="28644" e_stop="28599"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTAATGGAGAACAGAGAAGACTTGAAGTCAATTCTTCCATTTTTACCCTTTTCACTCCGATCATCTTCACTTTTTTGGCCGGCGCCGGTAACTGAAGCACTTACCGATATCTCGAAAGGTCCTAATCACAGCAAAATTGACTCCGGCGAAGGCCTATTCATCGCCATTTCCGATATTCGAAACTCTCTCTCGTTCCACAGTTTTTCAATTGATACTTCTGCTTCTCAAGGTTTTGCTCTGTTCTTCGATGATGTAAATTTCGTTTCCCATAATTCTCTGTTCATGAACATATAAATTTCATTTTTTTTTTGTTTTAAAGTATAGTATTAGTTTGTTGTTTCGATTCTTAATTTGAAAAGATACTATTAGTGCAATAATTTGTGTTTGATCGATGTTGATAGGTTGTGAAAAAAAGTTTCTATTTTTTATTATCGTGATTTATAGTACGTTTTCAAATAGATTGAGGTTTTTATGTCCGAATTTCGTTTGCTTGTGCACTCTGAATAAAGGCAAATAAATTTAAACGGAGGGAGAAGGAGTGTTGTTTTTCGTAAGATCTTGGCCGAACACCTCGATTCTTTAAAAATAAACACTTTTGACTTCTCAAAAACTTGATCGAACAAGCTACTGGTTTATTATGAAAAAAAAAAGTTTGAACTGATACGATTGTTTACTAAATGCTGAATTGTTTGTGCAGTTGCTTCCTAGGGATGAAGCTGCAAAATGGTTCGAAGAAGTGGTACCACAATTGGCTAAGTTGCTTTTGAGATTGCCTTTATTGCTAGAAACTCATTATGAGAATGCTGATGATGGAGTTTTGAAAGGAGTTAAAACCGGTCTTCGCTTGTTGGAATCACAAGAGCCTGGCATTGTCTTCCTTAGTCAGGTAGTAGTTTAGAATTTTATGTATGTATGTATATACTATATGTTAACTCTCCTTATTTTTTTACGTCTGTCTAGTTTTGATATTGTGATACGCCTTAGTAACACTCCTGGCTCCGTCACTGTGGGTTGGTGTGGTTGTGGTCAATAAGCAGGCAGGAAAGAGTTATCCTACTTTAAAGCAATTAACTTTAAGTTTAAGCGATGAGGAATCCCATTTCTAGATTTCTTCCTGTACCTAATACACACAAATGAGTTCATGTCACAGCCTGAGATTCGTATGGGATACTCAACAATTAATTTGTTTCATACCTCTTTTACCCCTTTAACTGATTTCTGCAGCAGAATTTGATTATTCGATGTTGTAACAAGTATCTGTAGCATTAATTTTCATGGTTTTCAATCTTTTTTTCCAGGAACTAATTGGTGCTCTTCTTGCATGCGCGTTGTTTTGTCTATTTC</genome_strand>
        <mrna_strand>TCTAATGGAGAAGAGAGAAGACTTGAAGTCAATTCTTCCATTTTTACCCTTTTCACTCCGATCATCTTCACTTTTTTGGCCGGCGCCGGTAGTTGAAGCACTTACCGATCTCTCGAAAGGCCCTCATCACAGCAAAATTGACTCCGGCGAAGTCCTCTTCATCGCCATTTCCGATATTCGAAACTCTCTCTCCCTCCACGATTTTTCAATTGATACTTCTGCTTCTCAAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCTTCCTAGGGATGAAGCTGCAAAAGGGTTCGAAGAAGTGGTGCCACAATTGGCTAACTTGCTTTTGAGATTGCCTTCATTGCTAGAAACTCATTATGAGAATGCTGATGATGGAGTTTTGAAAGGAGTTAAAACCGGTCTTCGCTTGTTGGAATCACAAGAGCCTGGCACTGTCTTTCTTAGTCAG............................................................................................................................................................................................................................................................................................................................................................................................................................GAATTAATCGGTGCTCTTCTTGCATGCGCGTTGTTTTGTCTATTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-k0pWa0/sgn_ests_tomato_potato" ref_id="SGN-E270528" ref_strand="+" ref_description="SGN-E270528 [cLEN-1-K9]">
      <seq>tgttaccaaaaactcaactggaagaagaaagtcaaattacagtctgagaagataaaaatggcggcttcagctttcggacagtgtagtcttcttcctcgtacagtatctttgaatcctcagcagtctcatcgtcagctctgcagtttgtctttccatagacaaactgtaaattcttcacttcctgcactgtcattcactcagtctataggttttgggtctgcaattgagagacattgtgtggatcgaaacgggtcggatttgtttaaaacggatgctgttcgtcagttgaatggttcagttatctctgctaaggggcatcggtttgctattgtggttgcacgttttaatgatctgatcaccaagaagcttttggagggagctttggagactttcaagaattactcggttagagaggaagatattgatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0093P12-2lNi1/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0093P12.2" temp_strand="+" temp_description="C12HBa0093P12.2  AC209662.1 htgs_phase:3 submitted_to_sgn_as:C12HBa0093P12 upload_account_name:italy">
        <position start="29766" stop="31590"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30066" g_stop="30273" g_length="208"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="208" r_length="208" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="30274" i_stop="30352" i_length="79">
            <donor d_prob="0.952" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="30353" g_stop="30474" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="209" r_stop="330" r_length="122" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="30475" i_stop="31193" i_length="719">
            <donor d_prob="0.966" d_score="1.00"/>
            <acceptor a_prob="0.972" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="31194" g_stop="31289" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="331" r_stop="426" r_length="96" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0093P12.2" gen_strand="+" ref_id="SGN-E270528" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>426</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0093P12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E270528" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30066" e_stop="30273"/>
          <exon e_start="30353" e_stop="30474"/>
          <exon e_start="31194" e_stop="31289"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTTACCAAAAACTCAACTGGAAGAAGAAAGTCAAATTACAGTCTGAGAAGATAAAAATGGCGGCTTCAGCTTTCGGACAGTGTAGTCTTCTTCCTCGTACAGTATCTTTGAATCCTCAGCAGTCTCATCGTCAGCTCTGCAGTTTGTCTTTCCATAGACAAACTGTAAATTCTTCACTTCCTGCACTGTCATTCACTCAGTCTATAGGTTAATATTATTTCTTTCGATTTCGATTCGATTTGATACTGTTTGGGTTTAAATTGGGAATTTTTTTGAATTTGATTAGGTTTTGGGTCTGCAATTGAGAGACATTGTGTGGATCGAAACGGGTCGGATTTGTTTAAAACGGATGCTGTTCGTCAGTTGAATGGTTCAGTTATCTCTGCTAAGGGGCATCGGTTTGCTATTGCAAGTTTTTTCTCTCTTTTTCTTATAATTATCCGTTTGATTGCTCGAATTCTTCAAAAATGTTGCTTCACTTGTGTCGAATCAGCTAAAAATGACTACTTTTGGAGTATCTGATAAGACCCGTGGAGTTTTTTTAGAGTCTGAGCAACATCACTTTACGATACTCTTTGCATTTCATTTTATGTGGTGATAAGAAATGAAGGATTGTATCTCCATCAGACTTGATTTATGTGATGCTTGTGTAGCTATATATATATATATATATATATATATGTCATTCTTTTTGGGACTGCAACAGAAGAAGTAGCTCTTTTCTTACATATAGGACTGCGATAGAGTACATAGGAGGGAGGAATAAACATGCTAAAAGTACCTTAGTATATGGTGTTTCATGCTTTGTTAATTCCAATAATAGCATGTCAATTGTCATTAAGGGCAACCTGAAATGTTAAAAAAGCGAAGAGTATTCAAGAAAAGAAATATCTCGTGTAAATTGAAAAGGAGGGAACCGTAGTTTAAAGTGGTGATTTTTAATTGCGAGAGTTAACAGTTTCATTTAAAGAAATTGTGAAAAGTCAATTGATACAATTCGTGTTTGGTCTGTAGTTCTGTTATGTTTTTGGTTTTACTTGAAGCCGTATAGAAGTTGAGTTCATTTCATTGACAATGTTTCTAATAGAGTGTTATTGGAACTGACTGACCGTCTGTTGGTTTTAAAGGTGGTTGCACGTTTTAATGATCTGATCACCAAGAAGCTTTTGGAGGGAGCTTTGGAGACTTTCAAGAATTACTCGGTTAGAGAGGAAGATATTGAT</genome_strand>
        <mrna_strand>TGTTACCAAAAACTCAACTGGAAGAAGAAAGTCAAATTACAGTCTGAGAAGATAAAAATGGCGGCTTCAGCTTTCGGACAGTGTAGTCTTCTTCCTCGTACAGTATCTTTGAATCCTCAGCAGTCTCATCGTCAGCTCTGCAGTTTGTCTTTCCATAGACAAACTGTAAATTCTTCACTTCCTGCACTGTCATTCACTCAGTCTATAG...............................................................................GTTTTGGGTCTGCAATTGAGAGACATTGTGTGGATCGAAACGGGTCGGATTTGTTTAAAACGGATGCTGTTCGTCAGTTGAATGGTTCAGTTATCTCTGCTAAGGGGCATCGGTTTGCTATT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGTTGCACGTTTTAATGATCTGATCACCAAGAAGCTTTTGGAGGGAGCTTTGGAGACTTTCAAGAATTACTCGGTTAGAGAGGAAGATATTGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-k0pWa0/sgn_ests_tomato_potato" ref_id="SGN-E709407" ref_strand="+" ref_description="SGN-E709407 [FA51DE12]">
      <seq>cccgataaagtcaaattaccgtctgagaagataaaaatggcggcttcagctttcggacagtgtagtcttcttcctcgtacagtatctttgaatcctcagcagtctcatcgtcagctctgcagtttgtctttccatacacaaactgtaaattcttcacttcctgcactgtcattcactcagtctataggttttgggtctgcaattgagagacattgtgtggatcgaaacgggtcggatttgtttaaaacggatgctgttcgtcagttgaatggttcagttatctctgctaaggggcatcggtttgctattgtggttgcacgttttaatgatctgatcaccaagaagcttttggagggagctttggagactctcaagaattactcggctacagaggaagatattgatgttgtgtgggctcctggctgttttgaaatcggcgtgactgcacaccttcttggaaagtcacagaaatatcacgcaatactctgcattggggctgtgatcccaggtgatacatctcactacgatgcagtcgttaatgctgccacatctggagcactttcaccaggcctaaattcaggcactccttgcata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0093P12-2lNi1/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0093P12.2" temp_strand="+" temp_description="C12HBa0093P12.2  AC209662.1 htgs_phase:3 submitted_to_sgn_as:C12HBa0093P12 upload_account_name:italy">
        <position start="29791" stop="32907"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30087" g_stop="30273" g_length="187"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="187" r_length="187" r_score="0.963"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="30274" i_stop="30352" i_length="79">
            <donor d_prob="0.952" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="30353" g_stop="30474" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="188" r_stop="309" r_length="122" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="30475" i_stop="31193" i_length="719">
            <donor d_prob="0.966" d_score="1.00"/>
            <acceptor a_prob="0.972" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="31194" g_stop="31289" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="310" r_stop="405" r_length="96" r_score="0.969"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="31290" i_stop="31565" i_length="276">
            <donor d_prob="0.991" d_score="0.94"/>
            <acceptor a_prob="0.987" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="31566" g_stop="31661" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="406" r_stop="501" r_length="96" r_score="0.969"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="31662" i_stop="32527" i_length="866">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="32528" g_stop="32606" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="502" r_stop="580" r_length="79" r_score="0.937"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0093P12.2" gen_strand="+" ref_id="SGN-E709407" ref_strand="+">
        <total_alignment_score>0.969</total_alignment_score>
        <cumulative_length_of_scored_exons>580</cumulative_length_of_scored_exons>
        <coverage percentage="0.976" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0093P12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E709407" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30087" e_stop="30273"/>
          <exon e_start="30353" e_stop="30474"/>
          <exon e_start="31194" e_stop="31289"/>
          <exon e_start="31566" e_stop="31661"/>
          <exon e_start="32528" e_stop="32606"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGAAGAAAGTCAAATTACAGTCTGAGAAGATAAAAATGGCGGCTTCAGCTTTCGGACAGTGTAGTCTTCTTCCTCGTACAGTATCTTTGAATCCTCAGCAGTCTCATCGTCAGCTCTGCAGTTTGTCTTTCCATAGACAAACTGTAAATTCTTCACTTCCTGCACTGTCATTCACTCAGTCTATAGGTTAATATTATTTCTTTCGATTTCGATTCGATTTGATACTGTTTGGGTTTAAATTGGGAATTTTTTTGAATTTGATTAGGTTTTGGGTCTGCAATTGAGAGACATTGTGTGGATCGAAACGGGTCGGATTTGTTTAAAACGGATGCTGTTCGTCAGTTGAATGGTTCAGTTATCTCTGCTAAGGGGCATCGGTTTGCTATTGCAAGTTTTTTCTCTCTTTTTCTTATAATTATCCGTTTGATTGCTCGAATTCTTCAAAAATGTTGCTTCACTTGTGTCGAATCAGCTAAAAATGACTACTTTTGGAGTATCTGATAAGACCCGTGGAGTTTTTTTAGAGTCTGAGCAACATCACTTTACGATACTCTTTGCATTTCATTTTATGTGGTGATAAGAAATGAAGGATTGTATCTCCATCAGACTTGATTTATGTGATGCTTGTGTAGCTATATATATATATATATATATATATATGTCATTCTTTTTGGGACTGCAACAGAAGAAGTAGCTCTTTTCTTACATATAGGACTGCGATAGAGTACATAGGAGGGAGGAATAAACATGCTAAAAGTACCTTAGTATATGGTGTTTCATGCTTTGTTAATTCCAATAATAGCATGTCAATTGTCATTAAGGGCAACCTGAAATGTTAAAAAAGCGAAGAGTATTCAAGAAAAGAAATATCTCGTGTAAATTGAAAAGGAGGGAACCGTAGTTTAAAGTGGTGATTTTTAATTGCGAGAGTTAACAGTTTCATTTAAAGAAATTGTGAAAAGTCAATTGATACAATTCGTGTTTGGTCTGTAGTTCTGTTATGTTTTTGGTTTTACTTGAAGCCGTATAGAAGTTGAGTTCATTTCATTGACAATGTTTCTAATAGAGTGTTATTGGAACTGACTGACCGTCTGTTGGTTTTAAAGGTGGTTGCACGTTTTAATGATCTGATCACCAAGAAGCTTTTGGAGGGAGCTTTGGAGACTTTCAAGAATTACTCGGTTAGAGAGGAAGATATTGATGTACGTTTTCTATATCTAATCCTCCGTTCCCTCAAAACCTGTATTTTCTCTTAAACTTGATGCAATTACTACAGAAGGTCCGCTTGCCATGAAAAATCTAAATGAGAGATTGATTGCTACATAATACCCCTCTATGACACGCTATACTGGAGCATAAAGATCCACTATGGGATAAATGGAGAATGTTGTATCAATAGATTAAATATAGAATAAGGCGTGGTGGGAAGTTGTCTCTTCCATTTCATGGCGTCATCTAGTTTTTTCCTCATAATGCAGGTTGTGTGGGTTCCTGGTTGTTTTGAAATCGGCGTGACTGCACAGCTTCTTGGAAAGTCACAGAAATATCACGCAATACTCTGCATTGGGGCTGTGGTAAGCTCACTTCCAAACATAAGTTTACCTTGTCGTTTTTCCTTCTACATTATTTGCCTACTACGATTCTGTTTCATATGATGATATTTTTTGTATCGTGTATGGAAATATGGAAGATTACAGTCAGATGCTTAAGTTATTCTTTTGGTATATTCTGTTTTGGATCGTCTTATGTGTTCATCATTGTAAGTGAACTAATCTTTTGAGTTACGGAAGGGGAAGCAGCTTAGAGTATGATGAGAAGCATTAACTGTGTCTTTTGTTCCTGTTGAGAAGACTAGCATTTATTTGTGACGCTCTTCCCTCAACAATGGAACTATAAAGCTGAACAAATAAAACTCAAGCACTATTTTGACAGATAGGCAAAATTATTAAACAAAGAAGCTATTGAACTTTAGATTCCTTACTGAAGATATATACTTGGATTCATTAAATGGAAATCTTTAACTAATTTCCATTGATGTGAGGGAGGGAAAAATCTGTGGATTTAGCTCAGTGTATTCTAATTTTTCTTTGTGGGACGGGCTAAACGTTTAGTTGTTGTAGTTGGACATAGTAGGGAGGCATGCGTGAATTTAGTGCCTTATTGTGAAGTAACCTCATCTGAACATACTGATAAACACTATATTATTTTTGCCCCGGTGGATTTCTTTCTCAGTTAATAAATATCTGGAAAGGAAAAGGTAATATAAAGCTAAAACTCTGAGCATTACAAACCCGAAGAAAGAAAAAATCCATCACAGACAAGAGATTGAAGTGCCTTTCTGCTTTTCCCTCTGTCCGAATCATAATCTAATATTTCTTTTTTTCTTGATGGTGATGTGTATCATTGTTTTTAATTGTATTTTTTGCTTTGTGGCTAGTAGATCAGAGGTGATACATCTCACTACGATGCAGTCGTTAATGCTGCCACATCTGGAGTACTTTCAGCAGGTCTAAATTCAG</genome_strand>
        <mrna_strand>CCCGATAAAGTCAAATTACCGTCTGAGAAGATAAAAATGGCGGCTTCAGCTTTCGGACAGTGTAGTCTTCTTCCTCGTACAGTATCTTTGAATCCTCAGCAGTCTCATCGTCAGCTCTGCAGTTTGTCTTTCCATACACAAACTGTAAATTCTTCACTTCCTGCACTGTCATTCACTCAGTCTATAG...............................................................................GTTTTGGGTCTGCAATTGAGAGACATTGTGTGGATCGAAACGGGTCGGATTTGTTTAAAACGGATGCTGTTCGTCAGTTGAATGGTTCAGTTATCTCTGCTAAGGGGCATCGGTTTGCTATT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGTTGCACGTTTTAATGATCTGATCACCAAGAAGCTTTTGGAGGGAGCTTTGGAGACTCTCAAGAATTACTCGGCTACAGAGGAAGATATTGAT....................................................................................................................................................................................................................................................................................GTTGTGTGGGCTCCTGGCTGTTTTGAAATCGGCGTGACTGCACACCTTCTTGGAAAGTCACAGAAATATCACGCAATACTCTGCATTGGGGCTGTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCCAGGTGATACATCTCACTACGATGCAGTCGTTAATGCTGCCACATCTGGAGCACTTTCACCAGGCCTAAATTCAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-k0pWa0/sgn_ests_tomato_potato" ref_id="SGN-E617665" ref_strand="+" ref_description="SGN-E617665 [66517]">
      <seq>agaaagtcaacttacagtccgagaagataaaaatggcggcttcagctttcggacagtgcaatcttctgcctcgtacagcatctgtgaatcctcagcagtctcatcgtcagctctacagtttgtctttccatagacaaagtgtaaattcttcacctcctgcactgtcattcactcaatctataggttttgggtctgcaattgagagacattgtgtggatcgaaacgggtcggatttgattaaaacagatgctgttcgtcagttgaacggttcagttatctctgctaagggccatcggtttgcaattgtggttgcacgttttaatgatctgatcaccaagaagcttttggagggagctttggagactttcaagaattactcggttagagaggaagatattgatgttgtgtgggttcctggttgttttgaaatcggcgtgactgcacagcttcttggaaagtcacagaaatatcaagcaatactctgcattggggctgtgatcagaggtgatacatctcactatgatgcagtcgttaatgctgccacatctggagtactttcagcaggtctaaattcaggtactccttgcatatttggtgttttgacatgtgataccttagagcaggctttcaatcgcgttggtgggaagtctgggaataaaggctccgaaacaggattgaccagctattgatatggcatctttggttgagcaccgactaaagccttcagagttagatgatcctttct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0093P12-2lNi1/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0093P12.2" temp_strand="+" temp_description="C12HBa0093P12.2  AC209662.1 htgs_phase:3 submitted_to_sgn_as:C12HBa0093P12 upload_account_name:italy">
        <position start="29791" stop="34275"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30091" g_stop="30273" g_length="183"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="183" r_length="183" r_score="0.940"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="30274" i_stop="30352" i_length="79">
            <donor d_prob="0.952" d_score="0.94"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="30353" g_stop="30474" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="184" r_stop="305" r_length="122" r_score="0.959"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="30475" i_stop="31193" i_length="719">
            <donor d_prob="0.966" d_score="0.94"/>
            <acceptor a_prob="0.972" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="31194" g_stop="31289" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="306" r_stop="401" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="31290" i_stop="31565" i_length="276">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="31566" g_stop="31661" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="402" r_stop="497" r_length="96" r_score="0.990"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="31662" i_stop="32527" i_length="866">
            <donor d_prob="0.993" d_score="0.98"/>
            <acceptor a_prob="0.995" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="32528" g_stop="32606" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="498" r_stop="576" r_length="79" r_score="0.987"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="32607" i_stop="33301" i_length="695">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.928" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="33302" g_stop="33348" g_length="47"/>
          <reference_exon_boundary r_type="cDNA" r_start="577" r_stop="623" r_length="47" r_score="0.979"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="33349" i_stop="33643" i_length="295">
            <donor d_prob="0.988" d_score="0.98"/>
            <acceptor a_prob="0.399" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="33644" g_stop="33703" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="624" r_stop="684" r_length="61" r_score="0.883"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="33704" i_stop="33916" i_length="213">
            <donor d_prob="0.998" d_score="0.86"/>
            <acceptor a_prob="0.999" a_score="0.88"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="33917" g_stop="33976" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="685" r_stop="745" r_length="61" r_score="0.833"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0093P12.2" gen_strand="+" ref_id="SGN-E617665" ref_strand="+">
        <total_alignment_score>0.950</total_alignment_score>
        <cumulative_length_of_scored_exons>743</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0093P12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E617665" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30091" e_stop="30273"/>
          <exon e_start="30353" e_stop="30474"/>
          <exon e_start="31194" e_stop="31289"/>
          <exon e_start="31566" e_stop="31661"/>
          <exon e_start="32528" e_stop="32606"/>
          <exon e_start="33302" e_stop="33348"/>
          <exon e_start="33644" e_stop="33703"/>
          <exon e_start="33917" e_stop="33976"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAAGTCAAATTACAGTCTGAGAAGATAAAAATGGCGGCTTCAGCTTTCGGACAGTGTAGTCTTCTTCCTCGTACAGTATCTTTGAATCCTCAGCAGTCTCATCGTCAGCTCTGCAGTTTGTCTTTCCATAGACAAACTGTAAATTCTTCACTTCCTGCACTGTCATTCACTCAGTCTATAGGTTAATATTATTTCTTTCGATTTCGATTCGATTTGATACTGTTTGGGTTTAAATTGGGAATTTTTTTGAATTTGATTAGGTTTTGGGTCTGCAATTGAGAGACATTGTGTGGATCGAAACGGGTCGGATTTGTTTAAAACGGATGCTGTTCGTCAGTTGAATGGTTCAGTTATCTCTGCTAAGGGGCATCGGTTTGCTATTGCAAGTTTTTTCTCTCTTTTTCTTATAATTATCCGTTTGATTGCTCGAATTCTTCAAAAATGTTGCTTCACTTGTGTCGAATCAGCTAAAAATGACTACTTTTGGAGTATCTGATAAGACCCGTGGAGTTTTTTTAGAGTCTGAGCAACATCACTTTACGATACTCTTTGCATTTCATTTTATGTGGTGATAAGAAATGAAGGATTGTATCTCCATCAGACTTGATTTATGTGATGCTTGTGTAGCTATATATATATATATATATATATATATGTCATTCTTTTTGGGACTGCAACAGAAGAAGTAGCTCTTTTCTTACATATAGGACTGCGATAGAGTACATAGGAGGGAGGAATAAACATGCTAAAAGTACCTTAGTATATGGTGTTTCATGCTTTGTTAATTCCAATAATAGCATGTCAATTGTCATTAAGGGCAACCTGAAATGTTAAAAAAGCGAAGAGTATTCAAGAAAAGAAATATCTCGTGTAAATTGAAAAGGAGGGAACCGTAGTTTAAAGTGGTGATTTTTAATTGCGAGAGTTAACAGTTTCATTTAAAGAAATTGTGAAAAGTCAATTGATACAATTCGTGTTTGGTCTGTAGTTCTGTTATGTTTTTGGTTTTACTTGAAGCCGTATAGAAGTTGAGTTCATTTCATTGACAATGTTTCTAATAGAGTGTTATTGGAACTGACTGACCGTCTGTTGGTTTTAAAGGTGGTTGCACGTTTTAATGATCTGATCACCAAGAAGCTTTTGGAGGGAGCTTTGGAGACTTTCAAGAATTACTCGGTTAGAGAGGAAGATATTGATGTACGTTTTCTATATCTAATCCTCCGTTCCCTCAAAACCTGTATTTTCTCTTAAACTTGATGCAATTACTACAGAAGGTCCGCTTGCCATGAAAAATCTAAATGAGAGATTGATTGCTACATAATACCCCTCTATGACACGCTATACTGGAGCATAAAGATCCACTATGGGATAAATGGAGAATGTTGTATCAATAGATTAAATATAGAATAAGGCGTGGTGGGAAGTTGTCTCTTCCATTTCATGGCGTCATCTAGTTTTTTCCTCATAATGCAGGTTGTGTGGGTTCCTGGTTGTTTTGAAATCGGCGTGACTGCACAGCTTCTTGGAAAGTCACAGAAATATCACGCAATACTCTGCATTGGGGCTGTGGTAAGCTCACTTCCAAACATAAGTTTACCTTGTCGTTTTTCCTTCTACATTATTTGCCTACTACGATTCTGTTTCATATGATGATATTTTTTGTATCGTGTATGGAAATATGGAAGATTACAGTCAGATGCTTAAGTTATTCTTTTGGTATATTCTGTTTTGGATCGTCTTATGTGTTCATCATTGTAAGTGAACTAATCTTTTGAGTTACGGAAGGGGAAGCAGCTTAGAGTATGATGAGAAGCATTAACTGTGTCTTTTGTTCCTGTTGAGAAGACTAGCATTTATTTGTGACGCTCTTCCCTCAACAATGGAACTATAAAGCTGAACAAATAAAACTCAAGCACTATTTTGACAGATAGGCAAAATTATTAAACAAAGAAGCTATTGAACTTTAGATTCCTTACTGAAGATATATACTTGGATTCATTAAATGGAAATCTTTAACTAATTTCCATTGATGTGAGGGAGGGAAAAATCTGTGGATTTAGCTCAGTGTATTCTAATTTTTCTTTGTGGGACGGGCTAAACGTTTAGTTGTTGTAGTTGGACATAGTAGGGAGGCATGCGTGAATTTAGTGCCTTATTGTGAAGTAACCTCATCTGAACATACTGATAAACACTATATTATTTTTGCCCCGGTGGATTTCTTTCTCAGTTAATAAATATCTGGAAAGGAAAAGGTAATATAAAGCTAAAACTCTGAGCATTACAAACCCGAAGAAAGAAAAAATCCATCACAGACAAGAGATTGAAGTGCCTTTCTGCTTTTCCCTCTGTCCGAATCATAATCTAATATTTCTTTTTTTCTTGATGGTGATGTGTATCATTGTTTTTAATTGTATTTTTTGCTTTGTGGCTAGTAGATCAGAGGTGATACATCTCACTACGATGCAGTCGTTAATGCTGCCACATCTGGAGTACTTTCAGCAGGTCTAAATTCAGGTGAGATAACATACTCCATTATAATCCACATGAGCAATAACAAGTATGCTGATTTTTAATCTTTTGCAACTCTTCAGTACTTTATTGATAGATAAGATTTTGGAACATTGTTAAAACTTCGAATGTAATATCTGGAATTAAATATGATGGTTGAAATAGAGGATTGTTATGGGACCATGATCCAACAAAGTGATAGGCAAGGTTTAGTAAGGTTGTGAGACTAAGCATGTAATATGGGGTTGTTAGGCTTCTAAAGTCCGAACATATTCACAGGATGAATTTGTTAATCTGGATGTTCGGACATACAAGACTGATAAGATTAGAAATGATAACTGACAGAAGGTGTAAGTACCCTAAAAGATGAAAAGAAGGGTCGTTGAAGACTACTTATGTCTTAAACAGTCATCTTAGATAGTTAGGCTGTGTCGAACACTCAGGCATAGTACAACAACTTGAAGATCCTATGTTAGAATCCTAGTTAAAAACTGTGTGAGTTCATATGCTCTAGTCCTGGTGTCATATTTACTCGATGGTTGTGCTTCTGAGCAGTATAATAAGTTCCCCGATGAATTTATCAAGGTAAAAGGTAGTTTGATTACCTCTGTTACACATCTTCTGTCATTATACGCTATTTTCAGTTCATCTTTTTCAATTCGCTGGCCAAACTAAAATCTCCCTTATGTAATGAGTTGCAGGTACTCCTTGCATATTTGGTGTTTTGACATGTGATACCTTGGAGCAGGTAAGCAATTAGCCGTTATACACGTGTGTTGGTGTTCTATCTCCTTTGTCCATTGTATAAATAGTGGTTGGAATAACAGATTCACGGAAAGTATAATCTGCATCAGCTGAGAGGTTATTATACCTTGTAGCTTTGTACAGCGAGATAGTCATTGTTGTTTCGTGTACTTGAACTGTTAGTTTTTTATGGATTTGTGTAACATATACTCTCCTTGGAACTACATTTACAATATTCTTCTTGGCTGTGTGAGGCTATCTTGCTCATGCATGCTAACCAACATCGCTATATAATGCAGGCTTTCAATCGCGTTGGTGGGAAGGCTGGGAATAAAGGTTCCGAAACTGCATTGA-CTGCTGTAAGTTGCCTGTGATTGTGTGACAATTAGATTTTATCCTCAAAACAAGTTCATTTGTGTCTGATTCTGCTCAAATATATCTGCCTTAATATGCGATTAAAAGGGTCTGACTAATATAATTGTTGAAACTTAAACATCAATAACTTAAGACTCAGTGTTCTGTTAGCAATAAGTGACTGATCTTGAATGCATATATTGTGTTTAATTTTTCAGATTGAGATGGCATCTTTGTTTGAGCACCACCTAAAGCCTTCAGAG-TAGACAATCCTTCTT</genome_strand>
        <mrna_strand>AGAAAGTCAACTTACAGTCCGAGAAGATAAAAATGGCGGCTTCAGCTTTCGGACAGTGCAATCTTCTGCCTCGTACAGCATCTGTGAATCCTCAGCAGTCTCATCGTCAGCTCTACAGTTTGTCTTTCCATAGACAAAGTGTAAATTCTTCACCTCCTGCACTGTCATTCACTCAATCTATAG...............................................................................GTTTTGGGTCTGCAATTGAGAGACATTGTGTGGATCGAAACGGGTCGGATTTGATTAAAACAGATGCTGTTCGTCAGTTGAACGGTTCAGTTATCTCTGCTAAGGGCCATCGGTTTGCAATT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGTTGCACGTTTTAATGATCTGATCACCAAGAAGCTTTTGGAGGGAGCTTTGGAGACTTTCAAGAATTACTCGGTTAGAGAGGAAGATATTGAT....................................................................................................................................................................................................................................................................................GTTGTGTGGGTTCCTGGTTGTTTTGAAATCGGCGTGACTGCACAGCTTCTTGGAAAGTCACAGAAATATCAAGCAATACTCTGCATTGGGGCTGTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAGAGGTGATACATCTCACTATGATGCAGTCGTTAATGCTGCCACATCTGGAGTACTTTCAGCAGGTCTAAATTCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACTCCTTGCATATTTGGTGTTTTGACATGTGATACCTTAGAGCAG.......................................................................................................................................................................................................................................................................................................GCTTTCAATCGCGTTGGTGGGAAGTCTGGGAATAAAGGCTCCGAAACAGGATTGACCAGCT.....................................................................................................................................................................................................................ATTGATATGGCATCTTTGGTTGAGCACCGACTAAAGCCTTCAGAGTTAGATGATCCTTTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-k0pWa0/sgn_ests_tomato_potato" ref_id="SGN-E407807" ref_strand="+" ref_description="SGN-E407807 [PPI-8-J7]">
      <seq>agaaagcaacttacagtccgagaagataaaaatggcggcttcagctttcggacagtgcaatcttcttcctcgtacagcatctgtgaatcctcagcaatctcatcgtcagctctacagtttgtctttccatagacaaagtgtaaattcttcacctcctgcactgtcattcactcaatctataggttttgggcctgcgattgagagacattgtgtggatcgaaacgggtcggatttgattaaaacagatgctgttcgtcagttgaacggttcagttatctctgctaaggggcatcggtttgctattgtggttgcacgttttaatgatctgatcaccaagaagcttttggagggagctttggagactttcaagaattactcggttagagaggaagaatattgatgttgtgtgggttcctggctgttttgaaatcggcgtgactgcacagcttcttggaaagtcacagaaatatcaagcaatactctgcattggggcttgtgatcagaaggtgatacatctcactatgatgcaagtcgttaatgcggccacatcttggagtactttcagcaggtctaaatttcaggtactccttgctattttggtgttttgacatgtgataccttagagccagctttcattcgcgttggtggggaaagtctggaaataaggttccgaaacagcattgacagctattg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0093P12-2lNi1/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0093P12.2" temp_strand="+" temp_description="C12HBa0093P12.2  AC209662.1 htgs_phase:3 submitted_to_sgn_as:C12HBa0093P12 upload_account_name:italy">
        <position start="29791" stop="33650"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30091" g_stop="30273" g_length="183"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="182" r_length="182" r_score="0.934"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="30274" i_stop="30352" i_length="79">
            <donor d_prob="0.952" d_score="0.94"/>
            <acceptor a_prob="0.999" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="30353" g_stop="30474" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="183" r_stop="304" r_length="122" r_score="0.959"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="30475" i_stop="31193" i_length="719">
            <donor d_prob="0.966" d_score="0.98"/>
            <acceptor a_prob="0.972" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="31194" g_stop="31289" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="305" r_stop="401" r_length="97" r_score="0.979"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="31290" i_stop="31565" i_length="276">
            <donor d_prob="0.991" d_score="0.96"/>
            <acceptor a_prob="0.987" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="31566" g_stop="31661" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="402" r_stop="496" r_length="95" r_score="0.969"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="31662" i_stop="32524" i_length="863">
            <donor d_prob="0.993" d_score="0.96"/>
            <acceptor a_prob="0.992" a_score="0.85"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="32525" g_stop="32606" g_length="82"/>
          <reference_exon_boundary r_type="cDNA" r_start="497" r_stop="581" r_length="85" r_score="0.866"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="32607" i_stop="33301" i_length="695">
            <donor d_prob="0.993" d_score="0.90"/>
            <acceptor a_prob="0.928" a_score="0.87"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="33302" g_stop="33348" g_length="47"/>
          <reference_exon_boundary r_type="cDNA" r_start="582" r_stop="628" r_length="47" r_score="0.872"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="33349" i_stop="33643" i_length="295">
            <donor d_prob="0.988" d_score="0.87"/>
            <acceptor a_prob="0.399" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="33644" g_stop="33650" g_length="7"/>
          <reference_exon_boundary r_type="cDNA" r_start="629" r_stop="635" r_length="7" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0093P12.2" gen_strand="+" ref_id="SGN-E407807" ref_strand="+">
        <total_alignment_score>0.943</total_alignment_score>
        <cumulative_length_of_scored_exons>633</cumulative_length_of_scored_exons>
        <coverage percentage="0.913" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0093P12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E407807" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30091" e_stop="30273"/>
          <exon e_start="30353" e_stop="30474"/>
          <exon e_start="31194" e_stop="31289"/>
          <exon e_start="31566" e_stop="31661"/>
          <exon e_start="32525" e_stop="32606"/>
          <exon e_start="33302" e_stop="33348"/>
          <exon e_start="33644" e_stop="33650"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAAGTCAAATTACAGTCTGAGAAGATAAAAATGGCGGCTTCAGCTTTCGGACAGTGTAGTCTTCTTCCTCGTACAGTATCTTTGAATCCTCAGCAGTCTCATCGTCAGCTCTGCAGTTTGTCTTTCCATAGACAAACTGTAAATTCTTCACTTCCTGCACTGTCATTCACTCAGTCTATAGGTTAATATTATTTCTTTCGATTTCGATTCGATTTGATACTGTTTGGGTTTAAATTGGGAATTTTTTTGAATTTGATTAGGTTTTGGGTCTGCAATTGAGAGACATTGTGTGGATCGAAACGGGTCGGATTTGTTTAAAACGGATGCTGTTCGTCAGTTGAATGGTTCAGTTATCTCTGCTAAGGGGCATCGGTTTGCTATTGCAAGTTTTTTCTCTCTTTTTCTTATAATTATCCGTTTGATTGCTCGAATTCTTCAAAAATGTTGCTTCACTTGTGTCGAATCAGCTAAAAATGACTACTTTTGGAGTATCTGATAAGACCCGTGGAGTTTTTTTAGAGTCTGAGCAACATCACTTTACGATACTCTTTGCATTTCATTTTATGTGGTGATAAGAAATGAAGGATTGTATCTCCATCAGACTTGATTTATGTGATGCTTGTGTAGCTATATATATATATATATATATATATATGTCATTCTTTTTGGGACTGCAACAGAAGAAGTAGCTCTTTTCTTACATATAGGACTGCGATAGAGTACATAGGAGGGAGGAATAAACATGCTAAAAGTACCTTAGTATATGGTGTTTCATGCTTTGTTAATTCCAATAATAGCATGTCAATTGTCATTAAGGGCAACCTGAAATGTTAAAAAAGCGAAGAGTATTCAAGAAAAGAAATATCTCGTGTAAATTGAAAAGGAGGGAACCGTAGTTTAAAGTGGTGATTTTTAATTGCGAGAGTTAACAGTTTCATTTAAAGAAATTGTGAAAAGTCAATTGATACAATTCGTGTTTGGTCTGTAGTTCTGTTATGTTTTTGGTTTTACTTGAAGCCGTATAGAAGTTGAGTTCATTTCATTGACAATGTTTCTAATAGAGTGTTATTGGAACTGACTGACCGTCTGTTGGTTTTAAAGGTGGTTGCACGTTTTAATGATCTGATCACCAAGAAGCTTTTGGAGGGAGCTTTGGAGACTTTCAAGAATTACTCGGTTAGAGAGGAAG-ATATTGATGTACGTTTTCTATATCTAATCCTCCGTTCCCTCAAAACCTGTATTTTCTCTTAAACTTGATGCAATTACTACAGAAGGTCCGCTTGCCATGAAAAATCTAAATGAGAGATTGATTGCTACATAATACCCCTCTATGACACGCTATACTGGAGCATAAAGATCCACTATGGGATAAATGGAGAATGTTGTATCAATAGATTAAATATAGAATAAGGCGTGGTGGGAAGTTGTCTCTTCCATTTCATGGCGTCATCTAGTTTTTTCCTCATAATGCAGGTTGTGTGGGTTCCTGGTTGTTTTGAAATCGGCGTGACTGCACAGCTTCTTGGAAAGTCACAGAAATATCACGCAATACTCTGCATTGGGGCTGTGGTAAGCTCACTTCCAAACATAAGTTTACCTTGTCGTTTTTCCTTCTACATTATTTGCCTACTACGATTCTGTTTCATATGATGATATTTTTTGTATCGTGTATGGAAATATGGAAGATTACAGTCAGATGCTTAAGTTATTCTTTTGGTATATTCTGTTTTGGATCGTCTTATGTGTTCATCATTGTAAGTGAACTAATCTTTTGAGTTACGGAAGGGGAAGCAGCTTAGAGTATGATGAGAAGCATTAACTGTGTCTTTTGTTCCTGTTGAGAAGACTAGCATTTATTTGTGACGCTCTTCCCTCAACAATGGAACTATAAAGCTGAACAAATAAAACTCAAGCACTATTTTGACAGATAGGCAAAATTATTAAACAAAGAAGCTATTGAACTTTAGATTCCTTACTGAAGATATATACTTGGATTCATTAAATGGAAATCTTTAACTAATTTCCATTGATGTGAGGGAGGGAAAAATCTGTGGATTTAGCTCAGTGTATTCTAATTTTTCTTTGTGGGACGGGCTAAACGTTTAGTTGTTGTAGTTGGACATAGTAGGGAGGCATGCGTGAATTTAGTGCCTTATTGTGAAGTAACCTCATCTGAACATACTGATAAACACTATATTATTTTTGCCCCGGTGGATTTCTTTCTCAGTTAATAAATATCTGGAAAGGAAAAGGTAATATAAAGCTAAAACTCTGAGCATTACAAACCCGAAGAAAGAAAAAATCCATCACAGACAAGAGATTGAAGTGCCTTTCTGCTTTTCCCTCTGTCCGAATCATAATCTAATATTTCTTTTTTTCTTGATGGTGATGTGTATCATTGTTTTTAATTGTATTTTTTGCTTTGTGGCTAGTAGATCAG-AGGTGATACATCTCACTACGATGC-AGTCGTTAATGCTGCCACATC-TGGAGTACTTTCAGCAGGTCTAAA-TTCAGGTGAGATAACATACTCCATTATAATCCACATGAGCAATAACAAGTATGCTGATTTTTAATCTTTTGCAACTCTTCAGTACTTTATTGATAGATAAGATTTTGGAACATTGTTAAAACTTCGAATGTAATATCTGGAATTAAATATGATGGTTGAAATAGAGGATTGTTATGGGACCATGATCCAACAAAGTGATAGGCAAGGTTTAGTAAGGTTGTGAGACTAAGCATGTAATATGGGGTTGTTAGGCTTCTAAAGTCCGAACATATTCACAGGATGAATTTGTTAATCTGGATGTTCGGACATACAAGACTGATAAGATTAGAAATGATAACTGACAGAAGGTGTAAGTACCCTAAAAGATGAAAAGAAGGGTCGTTGAAGACTACTTATGTCTTAAACAGTCATCTTAGATAGTTAGGCTGTGTCGAACACTCAGGCATAGTACAACAACTTGAAGATCCTATGTTAGAATCCTAGTTAAAAACTGTGTGAGTTCATATGCTCTAGTCCTGGTGTCATATTTACTCGATGGTTGTGCTTCTGAGCAGTATAATAAGTTCCCCGATGAATTTATCAAGGTAAAAGGTAGTTTGATTACCTCTGTTACACATCTTCTGTCATTATACGCTATTTTCAGTTCATCTTTTTCAATTCGCTGGCCAAACTAAAATCTCCCTTATGTAATGAGTTGCAGGTACTCCTTGCATATTTGGTGTTTTGACATGTGATACCTTGGAGCAGGTAAGCAATTAGCCGTTATACACGTGTGTTGGTGTTCTATCTCCTTTGTCCATTGTATAAATAGTGGTTGGAATAACAGATTCACGGAAAGTATAATCTGCATCAGCTGAGAGGTTATTATACCTTGTAGCTTTGTACAGCGAGATAGTCATTGTTGTTTCGTGTACTTGAACTGTTAGTTTTTTATGGATTTGTGTAACATATACTCTCCTTGGAACTACATTTACAATATTCTTCTTGGCTGTGTGAGGCTATCTTGCTCATGCATGCTAACCAACATCGCTATATAATGCAGGCTTTCA</genome_strand>
        <mrna_strand>AGAAAG-CAACTTACAGTCCGAGAAGATAAAAATGGCGGCTTCAGCTTTCGGACAGTGCAATCTTCTTCCTCGTACAGCATCTGTGAATCCTCAGCAATCTCATCGTCAGCTCTACAGTTTGTCTTTCCATAGACAAAGTGTAAATTCTTCACCTCCTGCACTGTCATTCACTCAATCTATAG...............................................................................GTTTTGGGCCTGCGATTGAGAGACATTGTGTGGATCGAAACGGGTCGGATTTGATTAAAACAGATGCTGTTCGTCAGTTGAACGGTTCAGTTATCTCTGCTAAGGGGCATCGGTTTGCTATT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGTTGCACGTTTTAATGATCTGATCACCAAGAAGCTTTTGGAGGGAGCTTTGGAGACTTTCAAGAATTACTCGGTTAGAGAGGAAGAATATTGAT....................................................................................................................................................................................................................................................................................GTTGTGTGGGTTCCTGGCTGTTTTGAAATCGGCGTGACTGCACAGCTTCTTGGAAAGTCACAGAAATATCAAGCAATACTCTGCATTGGGGCT-TG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-GATCAGAAGGTGATACATCTCACTATGATGCAAGTCGTTAATGCGGCCACATCTTGGAGTACTTTCAGCAGGTCTAAATTTCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACTCCTTGCTATTTTGGTGTTTTGACATGTGATACCTTAGAGCCA.......................................................................................................................................................................................................................................................................................................GCTTTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-k0pWa0/sgn_ests_tomato_potato" ref_id="SGN-E400509" ref_strand="+" ref_description="SGN-E400509 [cSTC-14-O3]">
      <seq>gtcaacttacagtccgagaagataaaaatggcggcttcagctttcggacagtgcaatcttcttcctcgtacagcatctgtgaatcctcagcaatctcatcgtcagctctacagtttgtctttccatagacaaagtgtaaattcttcacctcctgcactgtcattcactcaatctataggttttgggcctgcgattgagagacattgtgtggatcgaaacgggtcggatttgattaaaacagatgctgttcgtcagttgaacggttcaattatctctgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0093P12-2lNi1/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0093P12.2" temp_strand="+" temp_description="C12HBa0093P12.2  AC209662.1 htgs_phase:3 submitted_to_sgn_as:C12HBa0093P12 upload_account_name:italy">
        <position start="29796" stop="30752"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30096" g_stop="30273" g_length="178"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="178" r_length="178" r_score="0.938"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="30274" i_stop="30352" i_length="79">
            <donor d_prob="0.952" d_score="0.94"/>
            <acceptor a_prob="0.999" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="30353" g_stop="30452" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="179" r_stop="278" r_length="100" r_score="0.940"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0093P12.2" gen_strand="+" ref_id="SGN-E400509" ref_strand="+">
        <total_alignment_score>0.939</total_alignment_score>
        <cumulative_length_of_scored_exons>278</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0093P12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E400509" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30096" e_stop="30273"/>
          <exon e_start="30353" e_stop="30452"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCAAATTACAGTCTGAGAAGATAAAAATGGCGGCTTCAGCTTTCGGACAGTGTAGTCTTCTTCCTCGTACAGTATCTTTGAATCCTCAGCAGTCTCATCGTCAGCTCTGCAGTTTGTCTTTCCATAGACAAACTGTAAATTCTTCACTTCCTGCACTGTCATTCACTCAGTCTATAGGTTAATATTATTTCTTTCGATTTCGATTCGATTTGATACTGTTTGGGTTTAAATTGGGAATTTTTTTGAATTTGATTAGGTTTTGGGTCTGCAATTGAGAGACATTGTGTGGATCGAAACGGGTCGGATTTGTTTAAAACGGATGCTGTTCGTCAGTTGAATGGTTCAGTTATCTCTGC</genome_strand>
        <mrna_strand>GTCAACTTACAGTCCGAGAAGATAAAAATGGCGGCTTCAGCTTTCGGACAGTGCAATCTTCTTCCTCGTACAGCATCTGTGAATCCTCAGCAATCTCATCGTCAGCTCTACAGTTTGTCTTTCCATAGACAAAGTGTAAATTCTTCACCTCCTGCACTGTCATTCACTCAATCTATAG...............................................................................GTTTTGGGCCTGCGATTGAGAGACATTGTGTGGATCGAAACGGGTCGGATTTGATTAAAACAGATGCTGTTCGTCAGTTGAACGGTTCAATTATCTCTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-k0pWa0/sgn_ests_tomato_potato" ref_id="SGN-E288074" ref_strand="+" ref_description="SGN-E288074 [cLES-7-P10]">
      <seq>tcaaattacagtctgagaagataaaaatggcggcttcagctttcggacagtgtagtcttcttcctcgtacagtatctttgaatcctcagcagtctcatcgtcagctctgcagtttgtctttccatagacaaactgtaaattcttcacttactgcactgtcattcactcagtctataggttttgggtctgcaattgagagacattgtgtggatcgaaacgggtcggatttgtttaaaacggatgctgttcgtcagttgaatggttcagttatctctgctaaggggcatcggtttgctattgtggttgcacgttttaatgatctgatcaccaagaagcttttggagggagctttggagactttcaagaattactcggttagagaggaagatattgatgttgtgtgggttcctggttgttttgaaatcggcgtgactgcacagcttcttggaaagtcacagaaatatcacgcaatactctgcattggggctgtgatcagaggtgatacatctcactacgatgcagtcgttaatgctgccacatctggagtactttcagcaggtctaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0093P12-2lNi1/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0093P12.2" temp_strand="+" temp_description="C12HBa0093P12.2  AC209662.1 htgs_phase:3 submitted_to_sgn_as:C12HBa0093P12 upload_account_name:italy">
        <position start="29797" stop="32901"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30097" g_stop="30273" g_length="177"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="177" r_length="177" r_score="0.994"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="30274" i_stop="30352" i_length="79">
            <donor d_prob="0.952" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="30353" g_stop="30474" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="178" r_stop="299" r_length="122" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="30475" i_stop="31193" i_length="719">
            <donor d_prob="0.966" d_score="1.00"/>
            <acceptor a_prob="0.972" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="31194" g_stop="31289" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="300" r_stop="395" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="31290" i_stop="31565" i_length="276">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="31566" g_stop="31661" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="396" r_stop="491" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="31662" i_stop="32527" i_length="866">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="32528" g_stop="32601" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="492" r_stop="565" r_length="74" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0093P12.2" gen_strand="+" ref_id="SGN-E288074" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>565</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0093P12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E288074" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30097" e_stop="30273"/>
          <exon e_start="30353" e_stop="30474"/>
          <exon e_start="31194" e_stop="31289"/>
          <exon e_start="31566" e_stop="31661"/>
          <exon e_start="32528" e_stop="32601"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAAATTACAGTCTGAGAAGATAAAAATGGCGGCTTCAGCTTTCGGACAGTGTAGTCTTCTTCCTCGTACAGTATCTTTGAATCCTCAGCAGTCTCATCGTCAGCTCTGCAGTTTGTCTTTCCATAGACAAACTGTAAATTCTTCACTTCCTGCACTGTCATTCACTCAGTCTATAGGTTAATATTATTTCTTTCGATTTCGATTCGATTTGATACTGTTTGGGTTTAAATTGGGAATTTTTTTGAATTTGATTAGGTTTTGGGTCTGCAATTGAGAGACATTGTGTGGATCGAAACGGGTCGGATTTGTTTAAAACGGATGCTGTTCGTCAGTTGAATGGTTCAGTTATCTCTGCTAAGGGGCATCGGTTTGCTATTGCAAGTTTTTTCTCTCTTTTTCTTATAATTATCCGTTTGATTGCTCGAATTCTTCAAAAATGTTGCTTCACTTGTGTCGAATCAGCTAAAAATGACTACTTTTGGAGTATCTGATAAGACCCGTGGAGTTTTTTTAGAGTCTGAGCAACATCACTTTACGATACTCTTTGCATTTCATTTTATGTGGTGATAAGAAATGAAGGATTGTATCTCCATCAGACTTGATTTATGTGATGCTTGTGTAGCTATATATATATATATATATATATATATGTCATTCTTTTTGGGACTGCAACAGAAGAAGTAGCTCTTTTCTTACATATAGGACTGCGATAGAGTACATAGGAGGGAGGAATAAACATGCTAAAAGTACCTTAGTATATGGTGTTTCATGCTTTGTTAATTCCAATAATAGCATGTCAATTGTCATTAAGGGCAACCTGAAATGTTAAAAAAGCGAAGAGTATTCAAGAAAAGAAATATCTCGTGTAAATTGAAAAGGAGGGAACCGTAGTTTAAAGTGGTGATTTTTAATTGCGAGAGTTAACAGTTTCATTTAAAGAAATTGTGAAAAGTCAATTGATACAATTCGTGTTTGGTCTGTAGTTCTGTTATGTTTTTGGTTTTACTTGAAGCCGTATAGAAGTTGAGTTCATTTCATTGACAATGTTTCTAATAGAGTGTTATTGGAACTGACTGACCGTCTGTTGGTTTTAAAGGTGGTTGCACGTTTTAATGATCTGATCACCAAGAAGCTTTTGGAGGGAGCTTTGGAGACTTTCAAGAATTACTCGGTTAGAGAGGAAGATATTGATGTACGTTTTCTATATCTAATCCTCCGTTCCCTCAAAACCTGTATTTTCTCTTAAACTTGATGCAATTACTACAGAAGGTCCGCTTGCCATGAAAAATCTAAATGAGAGATTGATTGCTACATAATACCCCTCTATGACACGCTATACTGGAGCATAAAGATCCACTATGGGATAAATGGAGAATGTTGTATCAATAGATTAAATATAGAATAAGGCGTGGTGGGAAGTTGTCTCTTCCATTTCATGGCGTCATCTAGTTTTTTCCTCATAATGCAGGTTGTGTGGGTTCCTGGTTGTTTTGAAATCGGCGTGACTGCACAGCTTCTTGGAAAGTCACAGAAATATCACGCAATACTCTGCATTGGGGCTGTGGTAAGCTCACTTCCAAACATAAGTTTACCTTGTCGTTTTTCCTTCTACATTATTTGCCTACTACGATTCTGTTTCATATGATGATATTTTTTGTATCGTGTATGGAAATATGGAAGATTACAGTCAGATGCTTAAGTTATTCTTTTGGTATATTCTGTTTTGGATCGTCTTATGTGTTCATCATTGTAAGTGAACTAATCTTTTGAGTTACGGAAGGGGAAGCAGCTTAGAGTATGATGAGAAGCATTAACTGTGTCTTTTGTTCCTGTTGAGAAGACTAGCATTTATTTGTGACGCTCTTCCCTCAACAATGGAACTATAAAGCTGAACAAATAAAACTCAAGCACTATTTTGACAGATAGGCAAAATTATTAAACAAAGAAGCTATTGAACTTTAGATTCCTTACTGAAGATATATACTTGGATTCATTAAATGGAAATCTTTAACTAATTTCCATTGATGTGAGGGAGGGAAAAATCTGTGGATTTAGCTCAGTGTATTCTAATTTTTCTTTGTGGGACGGGCTAAACGTTTAGTTGTTGTAGTTGGACATAGTAGGGAGGCATGCGTGAATTTAGTGCCTTATTGTGAAGTAACCTCATCTGAACATACTGATAAACACTATATTATTTTTGCCCCGGTGGATTTCTTTCTCAGTTAATAAATATCTGGAAAGGAAAAGGTAATATAAAGCTAAAACTCTGAGCATTACAAACCCGAAGAAAGAAAAAATCCATCACAGACAAGAGATTGAAGTGCCTTTCTGCTTTTCCCTCTGTCCGAATCATAATCTAATATTTCTTTTTTTCTTGATGGTGATGTGTATCATTGTTTTTAATTGTATTTTTTGCTTTGTGGCTAGTAGATCAGAGGTGATACATCTCACTACGATGCAGTCGTTAATGCTGCCACATCTGGAGTACTTTCAGCAGGTCTAAA</genome_strand>
        <mrna_strand>TCAAATTACAGTCTGAGAAGATAAAAATGGCGGCTTCAGCTTTCGGACAGTGTAGTCTTCTTCCTCGTACAGTATCTTTGAATCCTCAGCAGTCTCATCGTCAGCTCTGCAGTTTGTCTTTCCATAGACAAACTGTAAATTCTTCACTTACTGCACTGTCATTCACTCAGTCTATAG...............................................................................GTTTTGGGTCTGCAATTGAGAGACATTGTGTGGATCGAAACGGGTCGGATTTGTTTAAAACGGATGCTGTTCGTCAGTTGAATGGTTCAGTTATCTCTGCTAAGGGGCATCGGTTTGCTATT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGTTGCACGTTTTAATGATCTGATCACCAAGAAGCTTTTGGAGGGAGCTTTGGAGACTTTCAAGAATTACTCGGTTAGAGAGGAAGATATTGAT....................................................................................................................................................................................................................................................................................GTTGTGTGGGTTCCTGGTTGTTTTGAAATCGGCGTGACTGCACAGCTTCTTGGAAAGTCACAGAAATATCACGCAATACTCTGCATTGGGGCTGTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAGAGGTGATACATCTCACTACGATGCAGTCGTTAATGCTGCCACATCTGGAGTACTTTCAGCAGGTCTAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-k0pWa0/sgn_ests_tomato_potato" ref_id="SGN-E289600" ref_strand="+" ref_description="SGN-E289600 [cLET-4-K19]">
      <seq>aattacagtctgagaagataaaaatggcggcttcagctttcggacagtgtagtcttcttcctcgtacagtatctttgaatcctcagcagtctcatcgtcagctctgcagtttgtctttccatagacaaactgtaaattcttcacttcctgcactgtcattcactcagtctataggttttgggtctgcaattgagagacattgtgtggatcgaaacgggtcggatttgtttaaaacggatgctgttcgtcagttgaatggttcagttatctctgctaaggggcatcggtttgctattgtggttgcacgttttaatgatctgatcaccaagaagcttttggagggagctttggagactttcaagaattact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0093P12-2lNi1/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0093P12.2" temp_strand="+" temp_description="C12HBa0093P12.2  AC209662.1 htgs_phase:3 submitted_to_sgn_as:C12HBa0093P12 upload_account_name:italy">
        <position start="29800" stop="31566"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30100" g_stop="30273" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="174" r_length="174" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="30274" i_stop="30352" i_length="79">
            <donor d_prob="0.952" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="30353" g_stop="30474" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="175" r_stop="296" r_length="122" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="30475" i_stop="31193" i_length="719">
            <donor d_prob="0.966" d_score="1.00"/>
            <acceptor a_prob="0.972" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="31194" g_stop="31266" g_length="73"/>
          <reference_exon_boundary r_type="cDNA" r_start="297" r_stop="369" r_length="73" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0093P12.2" gen_strand="+" ref_id="SGN-E289600" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>369</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0093P12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E289600" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30100" e_stop="30273"/>
          <exon e_start="30353" e_stop="30474"/>
          <exon e_start="31194" e_stop="31266"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATTACAGTCTGAGAAGATAAAAATGGCGGCTTCAGCTTTCGGACAGTGTAGTCTTCTTCCTCGTACAGTATCTTTGAATCCTCAGCAGTCTCATCGTCAGCTCTGCAGTTTGTCTTTCCATAGACAAACTGTAAATTCTTCACTTCCTGCACTGTCATTCACTCAGTCTATAGGTTAATATTATTTCTTTCGATTTCGATTCGATTTGATACTGTTTGGGTTTAAATTGGGAATTTTTTTGAATTTGATTAGGTTTTGGGTCTGCAATTGAGAGACATTGTGTGGATCGAAACGGGTCGGATTTGTTTAAAACGGATGCTGTTCGTCAGTTGAATGGTTCAGTTATCTCTGCTAAGGGGCATCGGTTTGCTATTGCAAGTTTTTTCTCTCTTTTTCTTATAATTATCCGTTTGATTGCTCGAATTCTTCAAAAATGTTGCTTCACTTGTGTCGAATCAGCTAAAAATGACTACTTTTGGAGTATCTGATAAGACCCGTGGAGTTTTTTTAGAGTCTGAGCAACATCACTTTACGATACTCTTTGCATTTCATTTTATGTGGTGATAAGAAATGAAGGATTGTATCTCCATCAGACTTGATTTATGTGATGCTTGTGTAGCTATATATATATATATATATATATATATGTCATTCTTTTTGGGACTGCAACAGAAGAAGTAGCTCTTTTCTTACATATAGGACTGCGATAGAGTACATAGGAGGGAGGAATAAACATGCTAAAAGTACCTTAGTATATGGTGTTTCATGCTTTGTTAATTCCAATAATAGCATGTCAATTGTCATTAAGGGCAACCTGAAATGTTAAAAAAGCGAAGAGTATTCAAGAAAAGAAATATCTCGTGTAAATTGAAAAGGAGGGAACCGTAGTTTAAAGTGGTGATTTTTAATTGCGAGAGTTAACAGTTTCATTTAAAGAAATTGTGAAAAGTCAATTGATACAATTCGTGTTTGGTCTGTAGTTCTGTTATGTTTTTGGTTTTACTTGAAGCCGTATAGAAGTTGAGTTCATTTCATTGACAATGTTTCTAATAGAGTGTTATTGGAACTGACTGACCGTCTGTTGGTTTTAAAGGTGGTTGCACGTTTTAATGATCTGATCACCAAGAAGCTTTTGGAGGGAGCTTTGGAGACTTTCAAGAATTACT</genome_strand>
        <mrna_strand>AATTACAGTCTGAGAAGATAAAAATGGCGGCTTCAGCTTTCGGACAGTGTAGTCTTCTTCCTCGTACAGTATCTTTGAATCCTCAGCAGTCTCATCGTCAGCTCTGCAGTTTGTCTTTCCATAGACAAACTGTAAATTCTTCACTTCCTGCACTGTCATTCACTCAGTCTATAG...............................................................................GTTTTGGGTCTGCAATTGAGAGACATTGTGTGGATCGAAACGGGTCGGATTTGTTTAAAACGGATGCTGTTCGTCAGTTGAATGGTTCAGTTATCTCTGCTAAGGGGCATCGGTTTGCTATT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGTTGCACGTTTTAATGATCTGATCACCAAGAAGCTTTTGGAGGGAGCTTTGGAGACTTTCAAGAATTACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-k0pWa0/sgn_ests_tomato_potato" ref_id="SGN-E477607" ref_strand="+" ref_description="SGN-E477607 [cSTD-1-K23]">
      <seq>agcactctgtgaactcctcagcaatctcatcgtcagctataccagtttgtctttccatagaccaaagtgtaaattcttcacctcccgcactgtcattcacctcaatctataggtttcgggtctgcaattgagagaccattgtgtggatcgaaacgggtcggatttgtttaaaacagatgctgttcgtcagttgaatggttctgttatctctgctaaagggcatcggtttgctattgtggttgcacgttttaatgatctgatcaccaagaagcttttggagggagctttggagactttcaagaattactcggttagagaggaagatattgatgttgtgtgggttcctggttgttttgaaatcggcgtgactgcacagcttcttggaaagtcacagaaatatcaagcaatactctgcattggggctgtgatcagaggtgatacatctcactatgatgcagtcgttaatgcggccacatctggagtactttcagcaggtctaaattcangtactccttgncatatttggtgttttgacatgtgataccttagagcangctttcaatcgcgttggtggggaagtctgggaaataaagttccgaaacagcattgacagctattg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0093P12-2lNi1/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0093P12.2" temp_strand="+" temp_description="C12HBa0093P12.2  AC209662.1 htgs_phase:3 submitted_to_sgn_as:C12HBa0093P12 upload_account_name:italy">
        <position start="29906" stop="34005"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30167" g_stop="30273" g_length="107"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="112" r_length="112" r_score="0.822"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="30274" i_stop="30352" i_length="79">
            <donor d_prob="0.952" d_score="0.88"/>
            <acceptor a_prob="0.999" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="30353" g_stop="30474" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="113" r_stop="235" r_length="123" r_score="0.951"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="30475" i_stop="31193" i_length="719">
            <donor d_prob="0.966" d_score="0.96"/>
            <acceptor a_prob="0.972" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="31194" g_stop="31289" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="236" r_stop="331" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="31290" i_stop="31565" i_length="276">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="31566" g_stop="31661" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="332" r_stop="427" r_length="96" r_score="0.990"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="31662" i_stop="32527" i_length="866">
            <donor d_prob="0.993" d_score="0.98"/>
            <acceptor a_prob="0.995" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="32528" g_stop="32606" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="428" r_stop="506" r_length="79" r_score="0.962"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="32607" i_stop="33301" i_length="695">
            <donor d_prob="0.993" d_score="0.96"/>
            <acceptor a_prob="0.928" a_score="0.91"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="33302" g_stop="33348" g_length="47"/>
          <reference_exon_boundary r_type="cDNA" r_start="507" r_stop="554" r_length="48" r_score="0.915"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="33349" i_stop="33643" i_length="295">
            <donor d_prob="0.988" d_score="0.91"/>
            <acceptor a_prob="0.399" a_score="0.86"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="33644" g_stop="33703" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="555" r_stop="615" r_length="61" r_score="0.867"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0093P12.2" gen_strand="+" ref_id="SGN-E477607" ref_strand="+">
        <total_alignment_score>0.934</total_alignment_score>
        <cumulative_length_of_scored_exons>607</cumulative_length_of_scored_exons>
        <coverage percentage="0.981" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0093P12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E477607" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30167" e_stop="30273"/>
          <exon e_start="30353" e_stop="30474"/>
          <exon e_start="31194" e_stop="31289"/>
          <exon e_start="31566" e_stop="31661"/>
          <exon e_start="32528" e_stop="32606"/>
          <exon e_start="33302" e_stop="33348"/>
          <exon e_start="33644" e_stop="33703"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTA-TCTTTGAA-TCCTCAGCAGTCTCATCGTCAGCTCT-GCAGTTTGTCTTTCCATAGA-CAAACTGTAAATTCTTCACTTCCTGCACTGTCATTCA-CTCAGTCTATAGGTTAATATTATTTCTTTCGATTTCGATTCGATTTGATACTGTTTGGGTTTAAATTGGGAATTTTTTTGAATTTGATTAGGTTTTGGGTCTGCAATTGAGAGA-CATTGTGTGGATCGAAACGGGTCGGATTTGTTTAAAACGGATGCTGTTCGTCAGTTGAATGGTTCAGTTATCTCTGCTAAGGGGCATCGGTTTGCTATTGCAAGTTTTTTCTCTCTTTTTCTTATAATTATCCGTTTGATTGCTCGAATTCTTCAAAAATGTTGCTTCACTTGTGTCGAATCAGCTAAAAATGACTACTTTTGGAGTATCTGATAAGACCCGTGGAGTTTTTTTAGAGTCTGAGCAACATCACTTTACGATACTCTTTGCATTTCATTTTATGTGGTGATAAGAAATGAAGGATTGTATCTCCATCAGACTTGATTTATGTGATGCTTGTGTAGCTATATATATATATATATATATATATATGTCATTCTTTTTGGGACTGCAACAGAAGAAGTAGCTCTTTTCTTACATATAGGACTGCGATAGAGTACATAGGAGGGAGGAATAAACATGCTAAAAGTACCTTAGTATATGGTGTTTCATGCTTTGTTAATTCCAATAATAGCATGTCAATTGTCATTAAGGGCAACCTGAAATGTTAAAAAAGCGAAGAGTATTCAAGAAAAGAAATATCTCGTGTAAATTGAAAAGGAGGGAACCGTAGTTTAAAGTGGTGATTTTTAATTGCGAGAGTTAACAGTTTCATTTAAAGAAATTGTGAAAAGTCAATTGATACAATTCGTGTTTGGTCTGTAGTTCTGTTATGTTTTTGGTTTTACTTGAAGCCGTATAGAAGTTGAGTTCATTTCATTGACAATGTTTCTAATAGAGTGTTATTGGAACTGACTGACCGTCTGTTGGTTTTAAAGGTGGTTGCACGTTTTAATGATCTGATCACCAAGAAGCTTTTGGAGGGAGCTTTGGAGACTTTCAAGAATTACTCGGTTAGAGAGGAAGATATTGATGTACGTTTTCTATATCTAATCCTCCGTTCCCTCAAAACCTGTATTTTCTCTTAAACTTGATGCAATTACTACAGAAGGTCCGCTTGCCATGAAAAATCTAAATGAGAGATTGATTGCTACATAATACCCCTCTATGACACGCTATACTGGAGCATAAAGATCCACTATGGGATAAATGGAGAATGTTGTATCAATAGATTAAATATAGAATAAGGCGTGGTGGGAAGTTGTCTCTTCCATTTCATGGCGTCATCTAGTTTTTTCCTCATAATGCAGGTTGTGTGGGTTCCTGGTTGTTTTGAAATCGGCGTGACTGCACAGCTTCTTGGAAAGTCACAGAAATATCACGCAATACTCTGCATTGGGGCTGTGGTAAGCTCACTTCCAAACATAAGTTTACCTTGTCGTTTTTCCTTCTACATTATTTGCCTACTACGATTCTGTTTCATATGATGATATTTTTTGTATCGTGTATGGAAATATGGAAGATTACAGTCAGATGCTTAAGTTATTCTTTTGGTATATTCTGTTTTGGATCGTCTTATGTGTTCATCATTGTAAGTGAACTAATCTTTTGAGTTACGGAAGGGGAAGCAGCTTAGAGTATGATGAGAAGCATTAACTGTGTCTTTTGTTCCTGTTGAGAAGACTAGCATTTATTTGTGACGCTCTTCCCTCAACAATGGAACTATAAAGCTGAACAAATAAAACTCAAGCACTATTTTGACAGATAGGCAAAATTATTAAACAAAGAAGCTATTGAACTTTAGATTCCTTACTGAAGATATATACTTGGATTCATTAAATGGAAATCTTTAACTAATTTCCATTGATGTGAGGGAGGGAAAAATCTGTGGATTTAGCTCAGTGTATTCTAATTTTTCTTTGTGGGACGGGCTAAACGTTTAGTTGTTGTAGTTGGACATAGTAGGGAGGCATGCGTGAATTTAGTGCCTTATTGTGAAGTAACCTCATCTGAACATACTGATAAACACTATATTATTTTTGCCCCGGTGGATTTCTTTCTCAGTTAATAAATATCTGGAAAGGAAAAGGTAATATAAAGCTAAAACTCTGAGCATTACAAACCCGAAGAAAGAAAAAATCCATCACAGACAAGAGATTGAAGTGCCTTTCTGCTTTTCCCTCTGTCCGAATCATAATCTAATATTTCTTTTTTTCTTGATGGTGATGTGTATCATTGTTTTTAATTGTATTTTTTGCTTTGTGGCTAGTAGATCAGAGGTGATACATCTCACTACGATGCAGTCGTTAATGCTGCCACATCTGGAGTACTTTCAGCAGGTCTAAATTCAGGTGAGATAACATACTCCATTATAATCCACATGAGCAATAACAAGTATGCTGATTTTTAATCTTTTGCAACTCTTCAGTACTTTATTGATAGATAAGATTTTGGAACATTGTTAAAACTTCGAATGTAATATCTGGAATTAAATATGATGGTTGAAATAGAGGATTGTTATGGGACCATGATCCAACAAAGTGATAGGCAAGGTTTAGTAAGGTTGTGAGACTAAGCATGTAATATGGGGTTGTTAGGCTTCTAAAGTCCGAACATATTCACAGGATGAATTTGTTAATCTGGATGTTCGGACATACAAGACTGATAAGATTAGAAATGATAACTGACAGAAGGTGTAAGTACCCTAAAAGATGAAAAGAAGGGTCGTTGAAGACTACTTATGTCTTAAACAGTCATCTTAGATAGTTAGGCTGTGTCGAACACTCAGGCATAGTACAACAACTTGAAGATCCTATGTTAGAATCCTAGTTAAAAACTGTGTGAGTTCATATGCTCTAGTCCTGGTGTCATATTTACTCGATGGTTGTGCTTCTGAGCAGTATAATAAGTTCCCCGATGAATTTATCAAGGTAAAAGGTAGTTTGATTACCTCTGTTACACATCTTCTGTCATTATACGCTATTTTCAGTTCATCTTTTTCAATTCGCTGGCCAAACTAAAATCTCCCTTATGTAATGAGTTGCAGGTACTCCTTG-CATATTTGGTGTTTTGACATGTGATACCTTGGAGCAGGTAAGCAATTAGCCGTTATACACGTGTGTTGGTGTTCTATCTCCTTTGTCCATTGTATAAATAGTGGTTGGAATAACAGATTCACGGAAAGTATAATCTGCATCAGCTGAGAGGTTATTATACCTTGTAGCTTTGTACAGCGAGATAGTCATTGTTGTTTCGTGTACTTGAACTGTTAGTTTTTTATGGATTTGTGTAACATATACTCTCCTTGGAACTACATTTACAATATTCTTCTTGGCTGTGTGAGGCTATCTTGCTCATGCATGCTAACCAACATCGCTATATAATGCAGGCTTTCAATCGCGTTGGT-GGGAAGGCTGGGAATAAAGGTTCCGAAACTGCATTGACTGCT</genome_strand>
        <mrna_strand>AGCACTCTGTGAACTCCTCAGCAATCTCATCGTCAGCTATACCAGTTTGTCTTTCCATAGACCAAAGTGTAAATTCTTCACCTCCCGCACTGTCATTCACCTCAATCTATAG...............................................................................GTTTCGGGTCTGCAATTGAGAGACCATTGTGTGGATCGAAACGGGTCGGATTTGTTTAAAACAGATGCTGTTCGTCAGTTGAATGGTTCTGTTATCTCTGCTAAAGGGCATCGGTTTGCTATT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGTTGCACGTTTTAATGATCTGATCACCAAGAAGCTTTTGGAGGGAGCTTTGGAGACTTTCAAGAATTACTCGGTTAGAGAGGAAGATATTGAT....................................................................................................................................................................................................................................................................................GTTGTGTGGGTTCCTGGTTGTTTTGAAATCGGCGTGACTGCACAGCTTCTTGGAAAGTCACAGAAATATCAAGCAATACTCTGCATTGGGGCTGTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAGAGGTGATACATCTCACTATGATGCAGTCGTTAATGCGGCCACATCTGGAGTACTTTCAGCAGGTCTAAATTCAN.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACTCCTTGNCATATTTGGTGTTTTGACATGTGATACCTTAGAGCAN.......................................................................................................................................................................................................................................................................................................GCTTTCAATCGCGTTGGTGGGGAAGTCTGGGAAATAAAGTTCCGAAACAGCATTGACAGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-k0pWa0/sgn_ests_tomato_potato" ref_id="SGN-E356653" ref_strand="+" ref_description="SGN-E356653 [cTOS-21-N14]">
      <seq>tggagtactttcagcaggtctaaattcaggtactccttgcatatttggtgttttgacatgtgataccttggagcaggctttcaatcgcgttggtgggaaggctgggaataaaggttccgaaactgcattgactgctattgagatggcatctttgtttgagcaccacctaaagccttcagagtagacaatccttcttatcgcgacaaggttctggattttcacctttaaacagaatctcactcgcattaccatcccaactagttactccgactaataaggttagacatcgagggggaaaaagagttccctctacttctcggtttccttcctcgtctactcattgatgctggatgtaaacattcttgtaaaagctgcacttgtttgagaaaatgttgcactttgtttcaagtttgagttttggataatagtattctttcaagttttgagttttggacttcaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0093P12-2lNi1/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0093P12.2" temp_strand="+" temp_description="C12HBa0093P12.2  AC209662.1 htgs_phase:3 submitted_to_sgn_as:C12HBa0093P12 upload_account_name:italy">
        <position start="32278" stop="34541"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="32578" g_stop="32606" g_length="29"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="29" r_length="29" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="32607" i_stop="33301" i_length="695">
            <donor d_prob="0.993" d_score="0.00"/>
            <acceptor a_prob="0.928" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="33302" g_stop="33348" g_length="47"/>
          <reference_exon_boundary r_type="cDNA" r_start="30" r_stop="76" r_length="47" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="33349" i_stop="33643" i_length="295">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.399" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="33644" g_stop="33703" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="77" r_stop="136" r_length="60" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="33704" i_stop="33916" i_length="213">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="33917" g_stop="34241" g_length="325"/>
          <reference_exon_boundary r_type="cDNA" r_start="137" r_stop="461" r_length="325" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0093P12.2" gen_strand="+" ref_id="SGN-E356653" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>461</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0093P12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E356653" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="32578" e_stop="32606"/>
          <exon e_start="33302" e_stop="33348"/>
          <exon e_start="33644" e_stop="33703"/>
          <exon e_start="33917" e_stop="34241"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGAGTACTTTCAGCAGGTCTAAATTCAGGTGAGATAACATACTCCATTATAATCCACATGAGCAATAACAAGTATGCTGATTTTTAATCTTTTGCAACTCTTCAGTACTTTATTGATAGATAAGATTTTGGAACATTGTTAAAACTTCGAATGTAATATCTGGAATTAAATATGATGGTTGAAATAGAGGATTGTTATGGGACCATGATCCAACAAAGTGATAGGCAAGGTTTAGTAAGGTTGTGAGACTAAGCATGTAATATGGGGTTGTTAGGCTTCTAAAGTCCGAACATATTCACAGGATGAATTTGTTAATCTGGATGTTCGGACATACAAGACTGATAAGATTAGAAATGATAACTGACAGAAGGTGTAAGTACCCTAAAAGATGAAAAGAAGGGTCGTTGAAGACTACTTATGTCTTAAACAGTCATCTTAGATAGTTAGGCTGTGTCGAACACTCAGGCATAGTACAACAACTTGAAGATCCTATGTTAGAATCCTAGTTAAAAACTGTGTGAGTTCATATGCTCTAGTCCTGGTGTCATATTTACTCGATGGTTGTGCTTCTGAGCAGTATAATAAGTTCCCCGATGAATTTATCAAGGTAAAAGGTAGTTTGATTACCTCTGTTACACATCTTCTGTCATTATACGCTATTTTCAGTTCATCTTTTTCAATTCGCTGGCCAAACTAAAATCTCCCTTATGTAATGAGTTGCAGGTACTCCTTGCATATTTGGTGTTTTGACATGTGATACCTTGGAGCAGGTAAGCAATTAGCCGTTATACACGTGTGTTGGTGTTCTATCTCCTTTGTCCATTGTATAAATAGTGGTTGGAATAACAGATTCACGGAAAGTATAATCTGCATCAGCTGAGAGGTTATTATACCTTGTAGCTTTGTACAGCGAGATAGTCATTGTTGTTTCGTGTACTTGAACTGTTAGTTTTTTATGGATTTGTGTAACATATACTCTCCTTGGAACTACATTTACAATATTCTTCTTGGCTGTGTGAGGCTATCTTGCTCATGCATGCTAACCAACATCGCTATATAATGCAGGCTTTCAATCGCGTTGGTGGGAAGGCTGGGAATAAAGGTTCCGAAACTGCATTGACTGCTGTAAGTTGCCTGTGATTGTGTGACAATTAGATTTTATCCTCAAAACAAGTTCATTTGTGTCTGATTCTGCTCAAATATATCTGCCTTAATATGCGATTAAAAGGGTCTGACTAATATAATTGTTGAAACTTAAACATCAATAACTTAAGACTCAGTGTTCTGTTAGCAATAAGTGACTGATCTTGAATGCATATATTGTGTTTAATTTTTCAGATTGAGATGGCATCTTTGTTTGAGCACCACCTAAAGCCTTCAGAGTAGACAATCCTTCTTATCGCGACAAGGTTCTGGATTTTCACCTTTAAACAGAATCTCACTCGCATTACCATCCCAACTAGTTACTCCGACTAATAAGGTTAGACATCGAGGGGGAAAAAGAGTTCCCTCTACTTCTCGGTTTCCTTCCTCGTCTACTCATTGATGCTGGATGTAAACATTCTTGTAAAAGCTGCACTTGTTTGAGAAAATGTTGCACTTTGTTTCAAGTTTGAGTTTTGGATAATAGTATTCTTTCAAGTTTTGAGTTTTGGACTTCAAA</genome_strand>
        <mrna_strand>TGGAGTACTTTCAGCAGGTCTAAATTCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACTCCTTGCATATTTGGTGTTTTGACATGTGATACCTTGGAGCAG.......................................................................................................................................................................................................................................................................................................GCTTTCAATCGCGTTGGTGGGAAGGCTGGGAATAAAGGTTCCGAAACTGCATTGACTGCT.....................................................................................................................................................................................................................ATTGAGATGGCATCTTTGTTTGAGCACCACCTAAAGCCTTCAGAGTAGACAATCCTTCTTATCGCGACAAGGTTCTGGATTTTCACCTTTAAACAGAATCTCACTCGCATTACCATCCCAACTAGTTACTCCGACTAATAAGGTTAGACATCGAGGGGGAAAAAGAGTTCCCTCTACTTCTCGGTTTCCTTCCTCGTCTACTCATTGATGCTGGATGTAAACATTCTTGTAAAAGCTGCACTTGTTTGAGAAAATGTTGCACTTTGTTTCAAGTTTGAGTTTTGGATAATAGTATTCTTTCAAGTTTTGAGTTTTGGACTTCAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-k0pWa0/sgn_ests_tomato_potato" ref_id="SGN-E226588" ref_strand="-" ref_description="SGN-E226588 [cLEL-26-M3]">
      <seq>attttcacctttaaacagaatctcactcgcattaccatcccaactagttactccgactaataaggttagacatcgagggggaaaaagagttccctctacttctcggtttccttcctcgtctactcattgatgctggatgtaaacattcttgtaaaagctgcacttgtttgagaaaatgttgcactttgtttcaagtttgagttttggataatagtattctttcaagttttgagttttggacttcaaattggttctatgtgaattggaacttcagcattgaatataaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0093P12-2lNi1/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0093P12.2" temp_strand="+" temp_description="C12HBa0093P12.2  AC209662.1 htgs_phase:3 submitted_to_sgn_as:C12HBa0093P12 upload_account_name:italy">
        <position start="33695" stop="34577"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33995" g_stop="34277" g_length="283"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="283" r_length="283" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="285" polyA_stop="306"/>
      <MATCH_line gen_id="C12HBa0093P12.2" gen_strand="+" ref_id="SGN-E226588" ref_strand="-">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>283</cumulative_length_of_scored_exons>
        <coverage percentage="0.925" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0093P12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E226588" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="33995" e_stop="34277"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTTTCACCTTTAAACAGAATCTCACTCGCATTACCATCCCAACTAGTTACTCCGACTAATAAGGTTAGACATCGAGGGGGAAAAAGAGTTCCCTCTACTTCTCGGTTTCCTTCCTCGTCTACTCATTGATGCTGGATGTAAACATTCTTGTAAAAGCTGCACTTGTTTGAGAAAATGTTGCACTTTGTTTCAAGTTTGAGTTTTGGATAATAGTATTCTTTCAAGTTTTGAGTTTTGGACTTCAAATTGGTTCTATGTGAATTGGAACTTCAACATTGATTA</genome_strand>
        <mrna_strand>ATTTTCACCTTTAAACAGAATCTCACTCGCATTACCATCCCAACTAGTTACTCCGACTAATAAGGTTAGACATCGAGGGGGAAAAAGAGTTCCCTCTACTTCTCGGTTTCCTTCCTCGTCTACTCATTGATGCTGGATGTAAACATTCTTGTAAAAGCTGCACTTGTTTGAGAAAATGTTGCACTTTGTTTCAAGTTTGAGTTTTGGATAATAGTATTCTTTCAAGTTTTGAGTTTTGGACTTCAAATTGGTTCTATGTGAATTGGAACTTCAGCATTGAATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-k0pWa0/sgn_ests_tomato_potato" ref_id="SGN-E249331" ref_strand="-" ref_description="SGN-E249331 [cLEF-50-M17]">
      <seq>tcactgacacttcaaagtgtaagatctttttatgatgatgggaaccatgaaaacagaaaacgacgaatcaggttcaacttgccagagaactctggcatggatcctgaagttagggatgagcttatagatttggttcaggcaaaggagtcaggggttgcatatataatgggacactcatatgtcaaggcacgtagattgtcctcttgctggaagaaatttgtcattgacgttgcatattcatttctgcgtaagaactgcagagcttccgctgttgcacttaacattcctcacattagtcttattgaagttggcatgatatactatgtctagagagaggcttggagccaagagaacattgaacgccttcatcggagttacttgcagaatcttttcacaggtagatgaactttttcttgaatatttttgccccaaataccaagtcttgctcatcactaatctttgtattgttagtatatatatatttgttatatcatctctttcacatatgacctgtatttatttgtgtattttatagttagatagagacagtagttataattttaataggtgatttaagctatgattgaaatagctatataggcttttgtaatctaacattttgatttctttttaaaaaaattgtaaactatttattaacattaaaaaaaccaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0093P12-2lNi1/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0093P12.2" temp_strand="-" temp_description="C12HBa0093P12.2  AC209662.1 htgs_phase:3 submitted_to_sgn_as:C12HBa0093P12 upload_account_name:italy">
        <position start="36004" stop="34743"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="35704" g_stop="35043" g_length="662"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="662" r_length="662" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="671" polyA_stop="684"/>
      <MATCH_line gen_id="C12HBa0093P12.2" gen_strand="-" ref_id="SGN-E249331" ref_strand="-">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>662</cumulative_length_of_scored_exons>
        <coverage percentage="0.968" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0093P12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E249331" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="35704" e_stop="35043"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCACTGACACTTCAAAGTGTAAGATCTTTTTATGATGATGGGAACCATGAAAACAGAAAACGACGAATCAGGTTCAACTTGCCAGAGAACTCTGGCATGGATCCTGAAGTTAGGGATGAGCTTATAGATTTGGTTCAGGCAAAGGAGTCAGGGGTTGCATATATAATGGGACACTCATATGTCAAGGCACGTAGATTGTCCTCTTGCTGGAAGAAATTTGTCATTGACGTTGCATATTCATTTCTGCGTAAGAACTGCAGAGCTTCCGCTGTTGCACTTAACATTCCTCACATTAGTCTTATTGAAGTTGGCATGATATACTATGTCTAGAGAGAGGCTTGGAGCCAAGAGAACATTGAACGCCTTCATCGGAGTTACTTGCAGAATCTTTTCACAGGTAGATGAACTTTTTCTTGAATATTTTTGCCCCAAATACCAAGTCTTGCTCATCACTAATCTTTGTATTGTTAGTATATATATATTTGTTATATCATCTCTTTCACATATGACCTGTATTTATTTGTGTATTTTATAGTTAGATAGAGACAGTAGTTATAATTTTAATAGGTGATTTAAGCTATGATTGAAATAGCTATATAGGCTTTTGTAATCTAACATTTTGATTTCTTTTTAAAAAAATTGTAAACTATTTATTAACATTA</genome_strand>
        <mrna_strand>TCACTGACACTTCAAAGTGTAAGATCTTTTTATGATGATGGGAACCATGAAAACAGAAAACGACGAATCAGGTTCAACTTGCCAGAGAACTCTGGCATGGATCCTGAAGTTAGGGATGAGCTTATAGATTTGGTTCAGGCAAAGGAGTCAGGGGTTGCATATATAATGGGACACTCATATGTCAAGGCACGTAGATTGTCCTCTTGCTGGAAGAAATTTGTCATTGACGTTGCATATTCATTTCTGCGTAAGAACTGCAGAGCTTCCGCTGTTGCACTTAACATTCCTCACATTAGTCTTATTGAAGTTGGCATGATATACTATGTCTAGAGAGAGGCTTGGAGCCAAGAGAACATTGAACGCCTTCATCGGAGTTACTTGCAGAATCTTTTCACAGGTAGATGAACTTTTTCTTGAATATTTTTGCCCCAAATACCAAGTCTTGCTCATCACTAATCTTTGTATTGTTAGTATATATATATTTGTTATATCATCTCTTTCACATATGACCTGTATTTATTTGTGTATTTTATAGTTAGATAGAGACAGTAGTTATAATTTTAATAGGTGATTTAAGCTATGATTGAAATAGCTATATAGGCTTTTGTAATCTAACATTTTGATTTCTTTTTAAAAAAATTGTAAACTATTTATTAACATTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-k0pWa0/sgn_ests_tomato_potato" ref_id="SGN-E253402" ref_strand="+" ref_description="SGN-E253402 [cLEG-24-G14]">
      <seq>gcaccaatcgtgctcatctggttgatatcaattatgataattgggttgtacaacactatcatttggaaccccaaaattgtgtctgctttttcgccctattatatcatcaagttttttagggatacaggaaaagatggttggatttctcttggaggtattctcctctcagttgcaggtactgaagctatgtatgcagatcttggtcatttctctgccttctccatgaggattacatttgcatttgtggtgtatccgtgcttggtgatacagtacatgggtcaagctgcttttctgtcaaaaaatctagattccattccaaatagcttctatagctcaatacctgatggtgtatactggcctgtttttgttattgcaacccttgcagccattgtaagcagccaatctatcatcacagccacattctcaatcgtcaagcaatgtaattcactaggttgcttcccgcgggtcaagattgtccacacctcaaagcataaagggcagatctatgtaccagaaataaattggatcctgatgattctcactcttgctgtggctatcgggttccaagatacaactttgattggaaatgcatacgggctagcttgcatgacagttatgtttatcacaacattcctcatgac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0093P12-2lNi1/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0093P12.2" temp_strand="-" temp_description="C12HBa0093P12.2  AC209662.1 htgs_phase:3 submitted_to_sgn_as:C12HBa0093P12 upload_account_name:italy">
        <position start="38810" stop="36111"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="38510" g_stop="38336" g_length="175"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="175" r_length="175" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="38335" i_stop="37853" i_length="483">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="37852" g_stop="37800" g_length="53"/>
          <reference_exon_boundary r_type="cDNA" r_start="176" r_stop="228" r_length="53" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="37799" i_stop="37583" i_length="217">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.977" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="37582" g_stop="37468" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="229" r_stop="343" r_length="115" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="37467" i_stop="37375" i_length="93">
            <donor d_prob="0.943" d_score="1.00"/>
            <acceptor a_prob="0.934" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="37374" g_stop="37123" g_length="252"/>
          <reference_exon_boundary r_type="cDNA" r_start="344" r_stop="595" r_length="252" r_score="0.996"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="37122" i_stop="36457" i_length="666">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.973" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="36456" g_stop="36411" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="596" r_stop="641" r_length="46" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0093P12.2" gen_strand="-" ref_id="SGN-E253402" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>641</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0093P12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E253402" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="38510" e_stop="38336"/>
          <exon e_start="37852" e_stop="37800"/>
          <exon e_start="37582" e_stop="37468"/>
          <exon e_start="37374" e_stop="37123"/>
          <exon e_start="36456" e_stop="36411"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCACCAATCGTGCTCATCTGGTTGATATCAATTATGATAATTGGGTTGTACAACACTATCATTTGGAACCCCAAAATTGTGTCTGCTTTTTCGCCCTATTATATCATCAAGTTTTTTAGGGATACAGGAAAAGATGGTTGGATTTCTCTTGGAGGTATTCTCCTCTCAGTTGCAGGTATATGACGTCTATTATCTCTTAACTCAGTAATTATTTAGGCATTATATTTAAACAAACTCTCAAACATGGCCTCTGACAAGTAATCGCTCCGATTTTGAGAGTGAACATCTAGACACCTCAACTCGTCTATAGTGTGTCAGTTGAACACTCCAACCTACAAAATGATCATCTAGACACCTCCAAAATTTATGTGCCACGTCAATGTAGGGTGTCCATGACCATGAGACATAATAGGGCCAAGTTGGAGTGTTTAGTTGTCACTTGAGACCAAGTTAAGATGTCTAGCTGTGCATTCTCAAAGTTGGAGTGCTTACTTGCCAGCTGAGGCCAAGTTTGAGTGTCTGTTTATGTTATTTATACAAGAAAACATAGTAAACTTTGAGAATTCAAAGCAGTTGTTTGTGCAGACACTTTTTGAAACTATGAGATAAACATTTACTAGAATTTTGGATCTGATTTCCAATTATTTTCATTTATCAGGTACTGAAGCTATGTATGCAGATCTTGGTCATTTCTCTGCCTTCTCCATGAGGGTAAGTCAAACTATTTGTTGGAGCGGACTAAATTAAACTGTGGATCGTGAAAACTTTGTGCTCGTACTCGTCTATAAGCTGAGTGTCCTGGTGTCTGGCAGATTATATTGTCCGTAGTTGTCATTTTTTCTGCATCATATTGTTCAACGTCCTAGTTAACTTGTTGGATTCCTGGAACTTACACCATGTCTATCTGAATTTGTTTTGTCCTATGCAGATTACATTTGCATTTGTGGTGTATCCGTGCTTGGTGATACAGTACATGGGTCAAGCTGCTTTTCTGTCAAAAAATCTAGATTCCATTCCAAATAGCTTCTATAGCTCAATACCTGGTTGGTTTTTCTTTTCCTTTTCTCTTTGTAACAGCTTAATGTTTTCACGATAAATGATTCAATCCTAACTGCTGGTCTATGCTATCCATGCAGATGGTGTATACTGGCCTGTTTTTGTTATTGCAACCCTTGCAGCCATTGTAGGCAGCCAATCTATCATCACAGCCACATTCTCAATCGTCAAGCAATGTAATTCACTAGGTTGCTTCCCGCGGGTCAAGATTGTCCACACCTCAAAGCATAAAGGGCAGATCTATGTACCAGAAATAAATTGGATCCTGATGATTCTCACTCTTGCTGTGGCTATCGGGTTCCAAGATACAACTTTGATTGGAAATGCATACGGTAAGCCTTCTTGTGTGCTAAAGATGTCTTATTTGGTCTTAAGTCTAAACAACCCTCTACGAGACTTTAAATATCAACAACTCTGCTCGACCAATTTTCACTACAGAATCTGATTTGCTTTACATGATTCTGTTCTTCTAAATGCTGCTCCTTTTCTTAGTGTCTTCACGATTTTCTTTTTTTCCCCAAGCTTGTGCTGGATGATTTATATATGTCCAATAAAGAAGATCTCTTGCAAAAAGAGAATAACAATTAAACTGAAACATAAATGGTGAACAAGGAGGATTCTCTAATTGGATGACATTTTTTTTATAAAAACAGCCCGGTGCACTAAGCTCCTGCTATGTGCGGGGTTCGGGGAAGGGACGGACCACAAGGGTCTACTATATGCAGTTTTACTCTGCAACTGTCAAGAGGTTGTTTACAGTTCGAACCTGTGACCTCCAGGTCACATGGCAACAACTTTACCAGCTATGTTAAGGCCCCTTCCTCTAATTGGATGACATGGAGAAGTAAAATATTCCTTGTGTAGAAGGGATTTTTTATGTACATTACTGCATTTAGTAAAGCCCAGCTTGCCTTTTATAGTTGGATTTTTTTCTTTCTAAATTCGAGTCATTCTATAACTCTTGAATTAAACCTTCTTATAGACGTTTTTTTTTTCAGGGCTAGCTTGCATGACAGTTATGTTTATCACAACATTCCTCATGAC</genome_strand>
        <mrna_strand>GCACCAATCGTGCTCATCTGGTTGATATCAATTATGATAATTGGGTTGTACAACACTATCATTTGGAACCCCAAAATTGTGTCTGCTTTTTCGCCCTATTATATCATCAAGTTTTTTAGGGATACAGGAAAAGATGGTTGGATTTCTCTTGGAGGTATTCTCCTCTCAGTTGCAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACTGAAGCTATGTATGCAGATCTTGGTCATTTCTCTGCCTTCTCCATGAGG.........................................................................................................................................................................................................................ATTACATTTGCATTTGTGGTGTATCCGTGCTTGGTGATACAGTACATGGGTCAAGCTGCTTTTCTGTCAAAAAATCTAGATTCCATTCCAAATAGCTTCTATAGCTCAATACCTG.............................................................................................ATGGTGTATACTGGCCTGTTTTTGTTATTGCAACCCTTGCAGCCATTGTAAGCAGCCAATCTATCATCACAGCCACATTCTCAATCGTCAAGCAATGTAATTCACTAGGTTGCTTCCCGCGGGTCAAGATTGTCCACACCTCAAAGCATAAAGGGCAGATCTATGTACCAGAAATAAATTGGATCCTGATGATTCTCACTCTTGCTGTGGCTATCGGGTTCCAAGATACAACTTTGATTGGAAATGCATACG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCTAGCTTGCATGACAGTTATGTTTATCACAACATTCCTCATGAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-k0pWa0/sgn_ests_tomato_potato" ref_id="SGN-E238280" ref_strand="+" ref_description="SGN-E238280 [cLED-22-L8]">
      <seq>tctccaaagatactttgtaaccactatagatccatcaaaatctcaaaaaccaaaggctattatcccataatcccccaaaaccaagaaatatcaatgtcaaaaaacaatacaatccccctaaaaccaataaacatcagtgtcaaaaatcaacattttatttaaaccaagaaaaaggctatagattcccacaactttgctcttacatcattccaaaatcatttcacctttttccctttaaattataccctttagtgtgaaaacaacatatagaaatcttcactttctctatttaactcatactatctactgatttgtgatttcaccaaaaaaaaaaatttgttaaagattggcacattttcaagttcagtattcattcgatttttgatatctacataaaaaaaaagtgtcctggtactactcaatattcctcagaacgacttcatattcaggtctcgaattcaaaacctcacatcaagattcttaggaaatttcaagattggttgaaaaactcatatccttctctaagtttcaagattggttccaaattaaaactcgagacttctgagtaagagcgttcgactagtaatgaacatggacatggaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0093P12-2lNi1/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0093P12.2" temp_strand="+" temp_description="C12HBa0093P12.2  AC209662.1 htgs_phase:3 submitted_to_sgn_as:C12HBa0093P12 upload_account_name:italy">
        <position start="45413" stop="46616"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="45713" g_stop="46316" g_length="604"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="604" r_length="604" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0093P12.2" gen_strand="+" ref_id="SGN-E238280" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>604</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0093P12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E238280" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="45713" e_stop="46316"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTCCAAAGATACTTTGTAACCACTATAGATCCATCAAAATCTCAAAAACCAAAGGCTATTATCCCATAATCCCCCAAAACCAAGAAATATCAATGTCAAAAAACAATACAATCCCCCTAAAACCAATAAACATCAGTGTCAAAAATCAACATTTTATTTAAACCAAGAAAAAGGCTATAGATTCCCACAACTTTGCTCTTACATCATTCCAAAATCATTTCACCTTTTTCCCTTTAAATTATACCCTTTAGTGTGAAAACAACATATAGAAATCTTCACTTTCTCTATTTAACTCATACTATCTACTGATTTGTGATTTCACCAAAAAAAAAAATTTGTTAAAGATTGGCACATTTTCAAGTTCAGTATTCATTCGATTTTTGATATCTACATAAAAAAAAAGTGTCCTGGTACTACTCAATATTCCTCAGAACGACTTCATATTCAGGTCTCGAATTCAAAACCTCACATCAAGATTCTTAGGAAATTTCAAGATTGGTTGAAAAACTCATATCCTTCTCTAAGTTTCAAGATTGGTTCCAAATTAAAACTCGAGACTTCTGAGTAAGAGCGTACGACTAGTAATGAACATGGACATGGAAT</genome_strand>
        <mrna_strand>TCTCCAAAGATACTTTGTAACCACTATAGATCCATCAAAATCTCAAAAACCAAAGGCTATTATCCCATAATCCCCCAAAACCAAGAAATATCAATGTCAAAAAACAATACAATCCCCCTAAAACCAATAAACATCAGTGTCAAAAATCAACATTTTATTTAAACCAAGAAAAAGGCTATAGATTCCCACAACTTTGCTCTTACATCATTCCAAAATCATTTCACCTTTTTCCCTTTAAATTATACCCTTTAGTGTGAAAACAACATATAGAAATCTTCACTTTCTCTATTTAACTCATACTATCTACTGATTTGTGATTTCACCAAAAAAAAAAATTTGTTAAAGATTGGCACATTTTCAAGTTCAGTATTCATTCGATTTTTGATATCTACATAAAAAAAAAGTGTCCTGGTACTACTCAATATTCCTCAGAACGACTTCATATTCAGGTCTCGAATTCAAAACCTCACATCAAGATTCTTAGGAAATTTCAAGATTGGTTGAAAAACTCATATCCTTCTCTAAGTTTCAAGATTGGTTCCAAATTAAAACTCGAGACTTCTGAGTAAGAGCGTTCGACTAGTAATGAACATGGACATGGAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-k0pWa0/sgn_ests_tomato_potato" ref_id="SGN-E228128" ref_strand="+" ref_description="SGN-E228128 [cLED-2-H10]">
      <seq>tctccaaagatactttgtaaccactatagatccatcaaaatctcaaaaaccaaaggctattatcccataatcccccaaaaccaagaaatatcaatgtcaaaaaacaatacaatccccctaaaaccaataaacatcagtgtcaaaaatcaacattttatttaaaccaagaaaaaggctatagattcccacaactttgctcttacatcattccaaaatcatttcacctttttccctttaaattataccctttagtgtgaaaacaacatatagaaatcttcactttctctatttaactcatactatctactgatttgtgatttcaccaaaaaaaaaaatttgttaaagattggcacattttcaagttcagtattcattcgatttttgatatctacataaaaaaaaagtgtcctggtactactcaatattcctcagaacgacttcatattcaggtctcgaattcaaaacctcacatcaagattcttaggaaatttcaagattggttgaaaaactcatatccttctcta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0093P12-2lNi1/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0093P12.2" temp_strand="+" temp_description="C12HBa0093P12.2  AC209662.1 htgs_phase:3 submitted_to_sgn_as:C12HBa0093P12 upload_account_name:italy">
        <position start="45413" stop="46536"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="45713" g_stop="46236" g_length="524"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="524" r_length="524" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0093P12.2" gen_strand="+" ref_id="SGN-E228128" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>524</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0093P12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E228128" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="45713" e_stop="46236"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTCCAAAGATACTTTGTAACCACTATAGATCCATCAAAATCTCAAAAACCAAAGGCTATTATCCCATAATCCCCCAAAACCAAGAAATATCAATGTCAAAAAACAATACAATCCCCCTAAAACCAATAAACATCAGTGTCAAAAATCAACATTTTATTTAAACCAAGAAAAAGGCTATAGATTCCCACAACTTTGCTCTTACATCATTCCAAAATCATTTCACCTTTTTCCCTTTAAATTATACCCTTTAGTGTGAAAACAACATATAGAAATCTTCACTTTCTCTATTTAACTCATACTATCTACTGATTTGTGATTTCACCAAAAAAAAAAATTTGTTAAAGATTGGCACATTTTCAAGTTCAGTATTCATTCGATTTTTGATATCTACATAAAAAAAAAGTGTCCTGGTACTACTCAATATTCCTCAGAACGACTTCATATTCAGGTCTCGAATTCAAAACCTCACATCAAGATTCTTAGGAAATTTCAAGATTGGTTGAAAAACTCATATCCTTCTCTA</genome_strand>
        <mrna_strand>TCTCCAAAGATACTTTGTAACCACTATAGATCCATCAAAATCTCAAAAACCAAAGGCTATTATCCCATAATCCCCCAAAACCAAGAAATATCAATGTCAAAAAACAATACAATCCCCCTAAAACCAATAAACATCAGTGTCAAAAATCAACATTTTATTTAAACCAAGAAAAAGGCTATAGATTCCCACAACTTTGCTCTTACATCATTCCAAAATCATTTCACCTTTTTCCCTTTAAATTATACCCTTTAGTGTGAAAACAACATATAGAAATCTTCACTTTCTCTATTTAACTCATACTATCTACTGATTTGTGATTTCACCAAAAAAAAAAATTTGTTAAAGATTGGCACATTTTCAAGTTCAGTATTCATTCGATTTTTGATATCTACATAAAAAAAAAGTGTCCTGGTACTACTCAATATTCCTCAGAACGACTTCATATTCAGGTCTCGAATTCAAAACCTCACATCAAGATTCTTAGGAAATTTCAAGATTGGTTGAAAAACTCATATCCTTCTCTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-k0pWa0/sgn_ests_tomato_potato" ref_id="SGN-E240935" ref_strand="+" ref_description="SGN-E240935 [cLED-24-E18]">
      <seq>tccaaagatactttgtaaccactatagatccatcaaaatctcaaaaaccaaaggctattatcccataatcccccaaaaccaagaaatatcaatgtcaaaaaacaatacaatccccctaaaaccaataaacatcagtgtcaaaaatcaacattttatttaaaccaagaaaaaggctatagattcccacaactttgctcttacatcattccaaaatcatttcacctttttccctttaaattataccctttagtgtgaaaacaacatatagaaatcttcactttctctatttaactcatactatctactgatttgtgatttcaccaaaaaaaaaaatttgttaaagattggcacattttcaagttcagtattcattcgatttttgatatctacataaaaaaaaagtgtcctggtactactcaatattcctcagaacgacttcatattcaggtctcgaattcaaaacctcacatcaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0093P12-2lNi1/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0093P12.2" temp_strand="+" temp_description="C12HBa0093P12.2  AC209662.1 htgs_phase:3 submitted_to_sgn_as:C12HBa0093P12 upload_account_name:italy">
        <position start="45415" stop="46488"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="45715" g_stop="46188" g_length="474"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="474" r_length="474" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0093P12.2" gen_strand="+" ref_id="SGN-E240935" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>474</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0093P12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E240935" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="45715" e_stop="46188"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCAAAGATACTTTGTAACCACTATAGATCCATCAAAATCTCAAAAACCAAAGGCTATTATCCCATAATCCCCCAAAACCAAGAAATATCAATGTCAAAAAACAATACAATCCCCCTAAAACCAATAAACATCAGTGTCAAAAATCAACATTTTATTTAAACCAAGAAAAAGGCTATAGATTCCCACAACTTTGCTCTTACATCATTCCAAAATCATTTCACCTTTTTCCCTTTAAATTATACCCTTTAGTGTGAAAACAACATATAGAAATCTTCACTTTCTCTATTTAACTCATACTATCTACTGATTTGTGATTTCACCAAAAAAAAAAATTTGTTAAAGATTGGCACATTTTCAAGTTCAGTATTCATTCGATTTTTGATATCTACATAAAAAAAAAGTGTCCTGGTACTACTCAATATTCCTCAGAACGACTTCATATTCAGGTCTCGAATTCAAAACCTCACATCAAG</genome_strand>
        <mrna_strand>TCCAAAGATACTTTGTAACCACTATAGATCCATCAAAATCTCAAAAACCAAAGGCTATTATCCCATAATCCCCCAAAACCAAGAAATATCAATGTCAAAAAACAATACAATCCCCCTAAAACCAATAAACATCAGTGTCAAAAATCAACATTTTATTTAAACCAAGAAAAAGGCTATAGATTCCCACAACTTTGCTCTTACATCATTCCAAAATCATTTCACCTTTTTCCCTTTAAATTATACCCTTTAGTGTGAAAACAACATATAGAAATCTTCACTTTCTCTATTTAACTCATACTATCTACTGATTTGTGATTTCACCAAAAAAAAAAATTTGTTAAAGATTGGCACATTTTCAAGTTCAGTATTCATTCGATTTTTGATATCTACATAAAAAAAAAGTGTCCTGGTACTACTCAATATTCCTCAGAACGACTTCATATTCAGGTCTCGAATTCAAAACCTCACATCAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-k0pWa0/sgn_ests_tomato_potato" ref_id="SGN-E235579" ref_strand="+" ref_description="SGN-E235579 [cLED-11-L6]">
      <seq>ccaaagatactttgtaaccactatagatccatcaaaatctcaaaaaccaaaggctattatcccataatcccccaaaaccaagaaatatcaatgtcaaaaaacaatacaatccccctaaaaccaataaacatcagtgtcaaaaatcaacattttatttaaaccaagaaaaaggctatagattcccacaactttgctcttacatcattccaaaatcatttcacctttttccctttaaattataccctttagtgtgaaaacaacatatagaaatcttcactttctctatttaactcatactatctactgatttgtgatttcaccaaaaaaaaaaatttgttaaagattggcacattttcaagttcagtattcattcgatttttgatatctacataaaaaaaaagtgtcctggtactactcaatattcctcagaacgacttcatattcaggtctcgaattcaaaacctcacatcaagattcttaggaaatttcaagattggttgaaaaactcatatccttctctaagtttcaagattggttccaaattaaaactcgagacttctgagtaagagcgtacgactagtaatgaacatggacatggaatcatcagaggcaaaattgagatcatcaaaagggtttattaatttggaggaacatcaacaatatttcaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0093P12-2lNi1/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0093P12.2" temp_strand="+" temp_description="C12HBa0093P12.2  AC209662.1 htgs_phase:3 submitted_to_sgn_as:C12HBa0093P12 upload_account_name:italy">
        <position start="45416" stop="46684"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="45716" g_stop="46384" g_length="669"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="669" r_length="669" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0093P12.2" gen_strand="+" ref_id="SGN-E235579" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>669</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0093P12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E235579" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="45716" e_stop="46384"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCAAAGATACTTTGTAACCACTATAGATCCATCAAAATCTCAAAAACCAAAGGCTATTATCCCATAATCCCCCAAAACCAAGAAATATCAATGTCAAAAAACAATACAATCCCCCTAAAACCAATAAACATCAGTGTCAAAAATCAACATTTTATTTAAACCAAGAAAAAGGCTATAGATTCCCACAACTTTGCTCTTACATCATTCCAAAATCATTTCACCTTTTTCCCTTTAAATTATACCCTTTAGTGTGAAAACAACATATAGAAATCTTCACTTTCTCTATTTAACTCATACTATCTACTGATTTGTGATTTCACCAAAAAAAAAAATTTGTTAAAGATTGGCACATTTTCAAGTTCAGTATTCATTCGATTTTTGATATCTACATAAAAAAAAAGTGTCCTGGTACTACTCAATATTCCTCAGAACGACTTCATATTCAGGTCTCGAATTCAAAACCTCACATCAAGATTCTTAGGAAATTTCAAGATTGGTTGAAAAACTCATATCCTTCTCTAAGTTTCAAGATTGGTTCCAAATTAAAACTCGAGACTTCTGAGTAAGAGCGTACGACTAGTAATGAACATGGACATGGAATCATCAGAGGCAAAATTGAGATCATCAAAAGGGTTTATTAATTTGGAGGAACATCAACAATATTTCAAC</genome_strand>
        <mrna_strand>CCAAAGATACTTTGTAACCACTATAGATCCATCAAAATCTCAAAAACCAAAGGCTATTATCCCATAATCCCCCAAAACCAAGAAATATCAATGTCAAAAAACAATACAATCCCCCTAAAACCAATAAACATCAGTGTCAAAAATCAACATTTTATTTAAACCAAGAAAAAGGCTATAGATTCCCACAACTTTGCTCTTACATCATTCCAAAATCATTTCACCTTTTTCCCTTTAAATTATACCCTTTAGTGTGAAAACAACATATAGAAATCTTCACTTTCTCTATTTAACTCATACTATCTACTGATTTGTGATTTCACCAAAAAAAAAAATTTGTTAAAGATTGGCACATTTTCAAGTTCAGTATTCATTCGATTTTTGATATCTACATAAAAAAAAAGTGTCCTGGTACTACTCAATATTCCTCAGAACGACTTCATATTCAGGTCTCGAATTCAAAACCTCACATCAAGATTCTTAGGAAATTTCAAGATTGGTTGAAAAACTCATATCCTTCTCTAAGTTTCAAGATTGGTTCCAAATTAAAACTCGAGACTTCTGAGTAAGAGCGTACGACTAGTAATGAACATGGACATGGAATCATCAGAGGCAAAATTGAGATCATCAAAAGGGTTTATTAATTTGGAGGAACATCAACAATATTTCAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-k0pWa0/sgn_ests_tomato_potato" ref_id="SGN-E376659" ref_strand="+" ref_description="SGN-E376659 [TUS-18-K16]">
      <seq>aaagatactttgtaaccactatagatccatcaaaatctcaaaaaccaaaggctattatcccataatcccccaaaaccaagaaatatcaatgtcaaaaaacaatacaatccccctaaaaccaataaacatcagtgtcaaaaatcaacattttatttaaaccaagaaaaaggctatagattcccacaactttgctcttacatcattccaaaatcatttcacctttttccctttaaattataccctttagtgtgaaaacaacatatagaaatcttcactttctctatttaactcatactatctactgatttgtgatttcaccaaaaaaaaaatttgttaaagattggcacattttcaagttcagtattcattcgatttttgatatctacataaaaaaaaagtgtcctggtactactcaatattcctcagaacgacttcatattcaggtctcgaattcaaaacctcacatcaagattcttaggaaatttcaagattggttgaaaaactcatatccttctctaagtttcaagattggttccaaattaaaactcgagacttctgagtaagagcgtacgactagtaatgaacatggacatggaatcatcagaggcaaaattgagatcatcaaaagggtttattaatttggaggaacatca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0093P12-2lNi1/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0093P12.2" temp_strand="+" temp_description="C12HBa0093P12.2  AC209662.1 htgs_phase:3 submitted_to_sgn_as:C12HBa0093P12 upload_account_name:italy">
        <position start="45418" stop="46671"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="45718" g_stop="46371" g_length="654"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="653" r_length="653" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0093P12.2" gen_strand="+" ref_id="SGN-E376659" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>654</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0093P12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E376659" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="45718" e_stop="46371"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAGATACTTTGTAACCACTATAGATCCATCAAAATCTCAAAAACCAAAGGCTATTATCCCATAATCCCCCAAAACCAAGAAATATCAATGTCAAAAAACAATACAATCCCCCTAAAACCAATAAACATCAGTGTCAAAAATCAACATTTTATTTAAACCAAGAAAAAGGCTATAGATTCCCACAACTTTGCTCTTACATCATTCCAAAATCATTTCACCTTTTTCCCTTTAAATTATACCCTTTAGTGTGAAAACAACATATAGAAATCTTCACTTTCTCTATTTAACTCATACTATCTACTGATTTGTGATTTCACCAAAAAAAAAAATTTGTTAAAGATTGGCACATTTTCAAGTTCAGTATTCATTCGATTTTTGATATCTACATAAAAAAAAAGTGTCCTGGTACTACTCAATATTCCTCAGAACGACTTCATATTCAGGTCTCGAATTCAAAACCTCACATCAAGATTCTTAGGAAATTTCAAGATTGGTTGAAAAACTCATATCCTTCTCTAAGTTTCAAGATTGGTTCCAAATTAAAACTCGAGACTTCTGAGTAAGAGCGTACGACTAGTAATGAACATGGACATGGAATCATCAGAGGCAAAATTGAGATCATCAAAAGGGTTTATTAATTTGGAGGAACATCA</genome_strand>
        <mrna_strand>AAAGATACTTTGTAACCACTATAGATCCATCAAAATCTCAAAAACCAAAGGCTATTATCCCATAATCCCCCAAAACCAAGAAATATCAATGTCAAAAAACAATACAATCCCCCTAAAACCAATAAACATCAGTGTCAAAAATCAACATTTTATTTAAACCAAGAAAAAGGCTATAGATTCCCACAACTTTGCTCTTACATCATTCCAAAATCATTTCACCTTTTTCCCTTTAAATTATACCCTTTAGTGTGAAAACAACATATAGAAATCTTCACTTTCTCTATTTAACTCATACTATCTACTGATTTGTGATTTCACC-AAAAAAAAAATTTGTTAAAGATTGGCACATTTTCAAGTTCAGTATTCATTCGATTTTTGATATCTACATAAAAAAAAAGTGTCCTGGTACTACTCAATATTCCTCAGAACGACTTCATATTCAGGTCTCGAATTCAAAACCTCACATCAAGATTCTTAGGAAATTTCAAGATTGGTTGAAAAACTCATATCCTTCTCTAAGTTTCAAGATTGGTTCCAAATTAAAACTCGAGACTTCTGAGTAAGAGCGTACGACTAGTAATGAACATGGACATGGAATCATCAGAGGCAAAATTGAGATCATCAAAAGGGTTTATTAATTTGGAGGAACATCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-k0pWa0/sgn_ests_tomato_potato" ref_id="SGN-E231424" ref_strand="+" ref_description="SGN-E231424 [cLED-4-E11]">
      <seq>aaagatactttgtaaccactatagatccatcaaaatctcaaaaaccaaaggctattatcccataatcccccaaaaccaagaaatatcaatgtcaaaaaacaatacaatccccctaaaaccaataaacatcagtgtcaaaaatcaacattttatttaaaccaagaaaaaggctatagattcccacaactttgctcttacatcattccaaaatcatttcacctttttccctttaaattataccctttagtgtgaaaacaacatatagaaatcttcactttctctatttaactcatactatctactgatttgtgatttcaccaaaaaaaaaatttgttaaagattggcacattttcaagttcagtattcattcgatttttgatatctacataaaaaaaaagtgtcctggtactactcaatattcctcagaacgacttcatattcaggtctcgaattcaaaacctcacatcaagattcttaggaaatttcaagattggttgaaaaactcatatccttctctaagtttcaagattggttccaaattaaaactcg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0093P12-2lNi1/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0093P12.2" temp_strand="+" temp_description="C12HBa0093P12.2  AC209662.1 htgs_phase:3 submitted_to_sgn_as:C12HBa0093P12 upload_account_name:italy">
        <position start="45418" stop="46567"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="45718" g_stop="46267" g_length="550"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="549" r_length="549" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0093P12.2" gen_strand="+" ref_id="SGN-E231424" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>550</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0093P12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E231424" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="45718" e_stop="46267"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAGATACTTTGTAACCACTATAGATCCATCAAAATCTCAAAAACCAAAGGCTATTATCCCATAATCCCCCAAAACCAAGAAATATCAATGTCAAAAAACAATACAATCCCCCTAAAACCAATAAACATCAGTGTCAAAAATCAACATTTTATTTAAACCAAGAAAAAGGCTATAGATTCCCACAACTTTGCTCTTACATCATTCCAAAATCATTTCACCTTTTTCCCTTTAAATTATACCCTTTAGTGTGAAAACAACATATAGAAATCTTCACTTTCTCTATTTAACTCATACTATCTACTGATTTGTGATTTCACCAAAAAAAAAAATTTGTTAAAGATTGGCACATTTTCAAGTTCAGTATTCATTCGATTTTTGATATCTACATAAAAAAAAAGTGTCCTGGTACTACTCAATATTCCTCAGAACGACTTCATATTCAGGTCTCGAATTCAAAACCTCACATCAAGATTCTTAGGAAATTTCAAGATTGGTTGAAAAACTCATATCCTTCTCTAAGTTTCAAGATTGGTTCCAAATTAAAACTCG</genome_strand>
        <mrna_strand>AAAGATACTTTGTAACCACTATAGATCCATCAAAATCTCAAAAACCAAAGGCTATTATCCCATAATCCCCCAAAACCAAGAAATATCAATGTCAAAAAACAATACAATCCCCCTAAAACCAATAAACATCAGTGTCAAAAATCAACATTTTATTTAAACCAAGAAAAAGGCTATAGATTCCCACAACTTTGCTCTTACATCATTCCAAAATCATTTCACCTTTTTCCCTTTAAATTATACCCTTTAGTGTGAAAACAACATATAGAAATCTTCACTTTCTCTATTTAACTCATACTATCTACTGATTTGTGATTTCACC-AAAAAAAAAATTTGTTAAAGATTGGCACATTTTCAAGTTCAGTATTCATTCGATTTTTGATATCTACATAAAAAAAAAGTGTCCTGGTACTACTCAATATTCCTCAGAACGACTTCATATTCAGGTCTCGAATTCAAAACCTCACATCAAGATTCTTAGGAAATTTCAAGATTGGTTGAAAAACTCATATCCTTCTCTAAGTTTCAAGATTGGTTCCAAATTAAAACTCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-k0pWa0/sgn_ests_tomato_potato" ref_id="SGN-E237672" ref_strand="+" ref_description="SGN-E237672 [cLED-19-K12]">
      <seq>aaagatactttgtaaccactatagatccatcaaaatctcaaaaaccaaaggctattatcccataatcccccaaaaccaagaaatatcaatgtcaaaaaacaatacaatccccctaaaaccaataaacatcagtgtcaaaaatcaacattttatttaaaccaagaaaaaggctatagattcccacaactttgctcttacatcattccaaaatcatttcacctttttccctttaaattataccctttagtgtgaaaacaacatatagaaatcttcactttctctatttaactcatactatctactgatttgtgatttcaccaaaaaaaaaatttgttaaagattggcacattttcaagttcagtattcattcgatttttgatatctacataaaaaaaaagtgtcctggtactactcaatattcctcagaacgacttcatattcaggtctcgaattca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0093P12-2lNi1/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0093P12.2" temp_strand="+" temp_description="C12HBa0093P12.2  AC209662.1 htgs_phase:3 submitted_to_sgn_as:C12HBa0093P12 upload_account_name:italy">
        <position start="45418" stop="46473"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="45718" g_stop="46173" g_length="456"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="455" r_length="455" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0093P12.2" gen_strand="+" ref_id="SGN-E237672" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>456</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0093P12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E237672" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="45718" e_stop="46173"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAGATACTTTGTAACCACTATAGATCCATCAAAATCTCAAAAACCAAAGGCTATTATCCCATAATCCCCCAAAACCAAGAAATATCAATGTCAAAAAACAATACAATCCCCCTAAAACCAATAAACATCAGTGTCAAAAATCAACATTTTATTTAAACCAAGAAAAAGGCTATAGATTCCCACAACTTTGCTCTTACATCATTCCAAAATCATTTCACCTTTTTCCCTTTAAATTATACCCTTTAGTGTGAAAACAACATATAGAAATCTTCACTTTCTCTATTTAACTCATACTATCTACTGATTTGTGATTTCACCAAAAAAAAAAATTTGTTAAAGATTGGCACATTTTCAAGTTCAGTATTCATTCGATTTTTGATATCTACATAAAAAAAAAGTGTCCTGGTACTACTCAATATTCCTCAGAACGACTTCATATTCAGGTCTCGAATTCA</genome_strand>
        <mrna_strand>AAAGATACTTTGTAACCACTATAGATCCATCAAAATCTCAAAAACCAAAGGCTATTATCCCATAATCCCCCAAAACCAAGAAATATCAATGTCAAAAAACAATACAATCCCCCTAAAACCAATAAACATCAGTGTCAAAAATCAACATTTTATTTAAACCAAGAAAAAGGCTATAGATTCCCACAACTTTGCTCTTACATCATTCCAAAATCATTTCACCTTTTTCCCTTTAAATTATACCCTTTAGTGTGAAAACAACATATAGAAATCTTCACTTTCTCTATTTAACTCATACTATCTACTGATTTGTGATTTCACC-AAAAAAAAAATTTGTTAAAGATTGGCACATTTTCAAGTTCAGTATTCATTCGATTTTTGATATCTACATAAAAAAAAAGTGTCCTGGTACTACTCAATATTCCTCAGAACGACTTCATATTCAGGTCTCGAATTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-k0pWa0/sgn_ests_tomato_potato" ref_id="SGN-E261709" ref_strand="+" ref_description="SGN-E261709 [cLEG-61-F9]">
      <seq>cactatagatccatcaaaatctcaaaaaccaaaggctattatcccataatcccccaaaaccaagaaatatcaatgtcaaaaaacaatacaatccccctaaaaccaataaacatcagtgtcaaaaatcaacattttatttaaaccaagaaaaaggctatagattcccacaactttgctcttacatcattccaaaatcatttcacctttttccctttaaattataccctttagtgtgaaaacaacatatagaaatcttcactttctctatttaactcatactatctactgatttgtgatttcaccaaaaaaaaaaatttgttaaagattggcacattttcaagttcagtattcattcgatttttgatatctacataaaaaaaaagtgtcctggtactactcaatattcctcagaacgacttcatattcaggtctcgaattcaaaacctcacatcaagattcttaggaaatttcaagattggttgaaaaactcatatccttctctaagtttcaagattggttccaaattaaaactcgagacttctgagtaagagcgtacgactagtaatgaacatggacatggaatcatcagaggcaaaattgagatcatcaaaagggtttattaatttggaggaacatcaacaatatttcaacaacattatggaaggcaataagatggagcataagagatcatttacacaaggacatggcaagaaaatgttgtcaatgaattattttagcttagagtcaattattttgttacttggtcttacagcatctttgttacttttgcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0093P12-2lNi1/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0093P12.2" temp_strand="+" temp_description="C12HBa0093P12.2  AC209662.1 htgs_phase:3 submitted_to_sgn_as:C12HBa0093P12 upload_account_name:italy">
        <position start="45434" stop="46824"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="45734" g_stop="46524" g_length="791"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="791" r_length="791" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0093P12.2" gen_strand="+" ref_id="SGN-E261709" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>791</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0093P12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E261709" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="45734" e_stop="46524"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CACTATAGATCCATCAAAATCTCAAAAACCAAAGGCTATTATCCCATAATCCCCCAAAACCAAGAAATATCAATGTCAAAAAACAATACAATCCCCCTAAAACCAATAAACATCAGTGTCAAAAATCAACATTTTATTTAAACCAAGAAAAAGGCTATAGATTCCCACAACTTTGCTCTTACATCATTCCAAAATCATTTCACCTTTTTCCCTTTAAATTATACCCTTTAGTGTGAAAACAACATATAGAAATCTTCACTTTCTCTATTTAACTCATACTATCTACTGATTTGTGATTTCACCAAAAAAAAAAATTTGTTAAAGATTGGCACATTTTCAAGTTCAGTATTCATTCGATTTTTGATATCTACATAAAAAAAAAGTGTCCTGGTACTACTCAATATTCCTCAGAACGACTTCATATTCAGGTCTCGAATTCAAAACCTCACATCAAGATTCTTAGGAAATTTCAAGATTGGTTGAAAAACTCATATCCTTCTCTAAGTTTCAAGATTGGTTCCAAATTAAAACTCGAGACTTCTGAGTAAGAGCGTACGACTAGTAATGAACATGGACATGGAATCATCAGAGGCAAAATTGAGATCATCAAAAGGGTTTATTAATTTGGAGGAACATCAACAATATTTCAACAACATTATGGAAGGCAATAAGATGGAGCATAAGAGATCATTTACACAAGGACATGGCAAGAAAATGTTGTCAATGAATTATTTTAGCTTAGAGTCAATTATTTTGTTACTTGGTCTTACAGCATCTTTGTTACTTTTGCC</genome_strand>
        <mrna_strand>CACTATAGATCCATCAAAATCTCAAAAACCAAAGGCTATTATCCCATAATCCCCCAAAACCAAGAAATATCAATGTCAAAAAACAATACAATCCCCCTAAAACCAATAAACATCAGTGTCAAAAATCAACATTTTATTTAAACCAAGAAAAAGGCTATAGATTCCCACAACTTTGCTCTTACATCATTCCAAAATCATTTCACCTTTTTCCCTTTAAATTATACCCTTTAGTGTGAAAACAACATATAGAAATCTTCACTTTCTCTATTTAACTCATACTATCTACTGATTTGTGATTTCACCAAAAAAAAAAATTTGTTAAAGATTGGCACATTTTCAAGTTCAGTATTCATTCGATTTTTGATATCTACATAAAAAAAAAGTGTCCTGGTACTACTCAATATTCCTCAGAACGACTTCATATTCAGGTCTCGAATTCAAAACCTCACATCAAGATTCTTAGGAAATTTCAAGATTGGTTGAAAAACTCATATCCTTCTCTAAGTTTCAAGATTGGTTCCAAATTAAAACTCGAGACTTCTGAGTAAGAGCGTACGACTAGTAATGAACATGGACATGGAATCATCAGAGGCAAAATTGAGATCATCAAAAGGGTTTATTAATTTGGAGGAACATCAACAATATTTCAACAACATTATGGAAGGCAATAAGATGGAGCATAAGAGATCATTTACACAAGGACATGGCAAGAAAATGTTGTCAATGAATTATTTTAGCTTAGAGTCAATTATTTTGTTACTTGGTCTTACAGCATCTTTGTTACTTTTGCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-k0pWa0/sgn_ests_tomato_potato" ref_id="SGN-E264814" ref_strand="+" ref_description="SGN-E264814 [cLEG-71-H8]">
      <seq>cactatagatccatcaaaatctcaaaaaccaaaggctattatcccataatcccccaaaaccaagaaatatcaatgtcaaaaaacaatacaatccccctaaaaccaataaacatcagtgtcaaaaatcaacattttatttaaaccaagaaaaaggctatagattcccacaactttgctcttacatcattccaaaatcatttcacctttttccctttaaattataccctttagtgtgaaaacaacatatagaaatcttcactttctctatttaactcatactatctactgatttgtgatttcaccaaaaaaaaaaatttgttaaagattggcacattttcaagttcagtattcattcgatttttgatatctacataaaaaaaaagtgtcctggtactactcaatattcctcagaacgacttcatattcaggtctcgaattcaaaacctcacatcaagattcttaggaaatttcaagattggttgaaaaactcatatccttctctaagtttca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0093P12-2lNi1/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0093P12.2" temp_strand="+" temp_description="C12HBa0093P12.2  AC209662.1 htgs_phase:3 submitted_to_sgn_as:C12HBa0093P12 upload_account_name:italy">
        <position start="45434" stop="46543"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="45734" g_stop="46243" g_length="510"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="510" r_length="510" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0093P12.2" gen_strand="+" ref_id="SGN-E264814" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>510</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0093P12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E264814" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="45734" e_stop="46243"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CACTATAGATCCATCAAAATCTCAAAAACCAAAGGCTATTATCCCATAATCCCCCAAAACCAAGAAATATCAATGTCAAAAAACAATACAATCCCCCTAAAACCAATAAACATCAGTGTCAAAAATCAACATTTTATTTAAACCAAGAAAAAGGCTATAGATTCCCACAACTTTGCTCTTACATCATTCCAAAATCATTTCACCTTTTTCCCTTTAAATTATACCCTTTAGTGTGAAAACAACATATAGAAATCTTCACTTTCTCTATTTAACTCATACTATCTACTGATTTGTGATTTCACCAAAAAAAAAAATTTGTTAAAGATTGGCACATTTTCAAGTTCAGTATTCATTCGATTTTTGATATCTACATAAAAAAAAAGTGTCCTGGTACTACTCAATATTCCTCAGAACGACTTCATATTCAGGTCTCGAATTCAAAACCTCACATCAAGATTCTTAGGAAATTTCAAGATTGGTTGAAAAACTCATATCCTTCTCTAAGTTTCA</genome_strand>
        <mrna_strand>CACTATAGATCCATCAAAATCTCAAAAACCAAAGGCTATTATCCCATAATCCCCCAAAACCAAGAAATATCAATGTCAAAAAACAATACAATCCCCCTAAAACCAATAAACATCAGTGTCAAAAATCAACATTTTATTTAAACCAAGAAAAAGGCTATAGATTCCCACAACTTTGCTCTTACATCATTCCAAAATCATTTCACCTTTTTCCCTTTAAATTATACCCTTTAGTGTGAAAACAACATATAGAAATCTTCACTTTCTCTATTTAACTCATACTATCTACTGATTTGTGATTTCACCAAAAAAAAAAATTTGTTAAAGATTGGCACATTTTCAAGTTCAGTATTCATTCGATTTTTGATATCTACATAAAAAAAAAGTGTCCTGGTACTACTCAATATTCCTCAGAACGACTTCATATTCAGGTCTCGAATTCAAAACCTCACATCAAGATTCTTAGGAAATTTCAAGATTGGTTGAAAAACTCATATCCTTCTCTAAGTTTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-k0pWa0/sgn_ests_tomato_potato" ref_id="SGN-E264329" ref_strand="+" ref_description="SGN-E264329 [cLEG-70-H8]">
      <seq>cactatagatccatcaaaatctcaaaaaccaaaggctattatcccataatcccccaaaaccaagaaatatcaatgtcaaaaaacaatacaatccccctaaaaccaataaacatcagtgtcaaaaatcaacattttatttaaaccaagaaaaaggctatagattcccacaactttgctcttacatcattccaaaatcatttcacctttttccctttaaattataccctttagtgtgaaaacaacatatagaaatcttcactttctctatttaactcatactatctactgatttgtgatttcaccaaaaaaaaaaatttgttaaagattggcacattttcaagttcagtattcattcgatttttgatatctacataaaaaaaaagtgtcctggtactactcaatattcctcagaacgacttcatattcaggtctcgaattcaaaacctcacatcaagattcttaggaaatttcaagattgggtgaaaaactcatatccttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0093P12-2lNi1/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0093P12.2" temp_strand="+" temp_description="C12HBa0093P12.2  AC209662.1 htgs_phase:3 submitted_to_sgn_as:C12HBa0093P12 upload_account_name:italy">
        <position start="45434" stop="46532"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="45734" g_stop="46232" g_length="499"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="499" r_length="499" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0093P12.2" gen_strand="+" ref_id="SGN-E264329" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>499</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0093P12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E264329" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="45734" e_stop="46232"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CACTATAGATCCATCAAAATCTCAAAAACCAAAGGCTATTATCCCATAATCCCCCAAAACCAAGAAATATCAATGTCAAAAAACAATACAATCCCCCTAAAACCAATAAACATCAGTGTCAAAAATCAACATTTTATTTAAACCAAGAAAAAGGCTATAGATTCCCACAACTTTGCTCTTACATCATTCCAAAATCATTTCACCTTTTTCCCTTTAAATTATACCCTTTAGTGTGAAAACAACATATAGAAATCTTCACTTTCTCTATTTAACTCATACTATCTACTGATTTGTGATTTCACCAAAAAAAAAAATTTGTTAAAGATTGGCACATTTTCAAGTTCAGTATTCATTCGATTTTTGATATCTACATAAAAAAAAAGTGTCCTGGTACTACTCAATATTCCTCAGAACGACTTCATATTCAGGTCTCGAATTCAAAACCTCACATCAAGATTCTTAGGAAATTTCAAGATTGGTTGAAAAACTCATATCCTTC</genome_strand>
        <mrna_strand>CACTATAGATCCATCAAAATCTCAAAAACCAAAGGCTATTATCCCATAATCCCCCAAAACCAAGAAATATCAATGTCAAAAAACAATACAATCCCCCTAAAACCAATAAACATCAGTGTCAAAAATCAACATTTTATTTAAACCAAGAAAAAGGCTATAGATTCCCACAACTTTGCTCTTACATCATTCCAAAATCATTTCACCTTTTTCCCTTTAAATTATACCCTTTAGTGTGAAAACAACATATAGAAATCTTCACTTTCTCTATTTAACTCATACTATCTACTGATTTGTGATTTCACCAAAAAAAAAAATTTGTTAAAGATTGGCACATTTTCAAGTTCAGTATTCATTCGATTTTTGATATCTACATAAAAAAAAAGTGTCCTGGTACTACTCAATATTCCTCAGAACGACTTCATATTCAGGTCTCGAATTCAAAACCTCACATCAAGATTCTTAGGAAATTTCAAGATTGGGTGAAAAACTCATATCCTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-k0pWa0/sgn_ests_tomato_potato" ref_id="SGN-E231616" ref_strand="+" ref_description="SGN-E231616 [cLED-4-E7]">
      <seq>aaaatctcaaaaaccaaaggctattatcccataatcccccaaaaccaagaaatatcaatgtcaaaaaacaatacaatccccctaaaaccaataaacatcagtgtcaaaaatcaacattttatttaaaccaagaaaaaggctatagattcccacaactttgctcttacatcattccaaaatcatttcacctttttccctttaaattataccctttagtgtgaaaacaacatatagaaatcttcactttctctatttaactcatactatctactgatttgtgatttcaccaaaaaaaaaaatttgttaaagattggcacattttcaagttcagtattcattcgatttttgatatctacataaaaaaaaagtgtcctggtactactcaatattcctcagaacgacttcatattcaggtctcgaattcaaaacctcacatcaagattcttaggaaatttcaagattggttgaaaaactcatatccttctctaagtttcaagattggttccaaattaaaactcgag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0093P12-2lNi1/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0093P12.2" temp_strand="+" temp_description="C12HBa0093P12.2  AC209662.1 htgs_phase:3 submitted_to_sgn_as:C12HBa0093P12 upload_account_name:italy">
        <position start="45449" stop="46569"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="45749" g_stop="46269" g_length="521"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="521" r_length="521" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0093P12.2" gen_strand="+" ref_id="SGN-E231616" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>521</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0093P12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E231616" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="45749" e_stop="46269"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAATCTCAAAAACCAAAGGCTATTATCCCATAATCCCCCAAAACCAAGAAATATCAATGTCAAAAAACAATACAATCCCCCTAAAACCAATAAACATCAGTGTCAAAAATCAACATTTTATTTAAACCAAGAAAAAGGCTATAGATTCCCACAACTTTGCTCTTACATCATTCCAAAATCATTTCACCTTTTTCCCTTTAAATTATACCCTTTAGTGTGAAAACAACATATAGAAATCTTCACTTTCTCTATTTAACTCATACTATCTACTGATTTGTGATTTCACCAAAAAAAAAAATTTGTTAAAGATTGGCACATTTTCAAGTTCAGTATTCATTCGATTTTTGATATCTACATAAAAAAAAAGTGTCCTGGTACTACTCAATATTCCTCAGAACGACTTCATATTCAGGTCTCGAATTCAAAACCTCACATCAAGATTCTTAGGAAATTTCAAGATTGGTTGAAAAACTCATATCCTTCTCTAAGTTTCAAGATTGGTTCCAAATTAAAACTCGAG</genome_strand>
        <mrna_strand>AAAATCTCAAAAACCAAAGGCTATTATCCCATAATCCCCCAAAACCAAGAAATATCAATGTCAAAAAACAATACAATCCCCCTAAAACCAATAAACATCAGTGTCAAAAATCAACATTTTATTTAAACCAAGAAAAAGGCTATAGATTCCCACAACTTTGCTCTTACATCATTCCAAAATCATTTCACCTTTTTCCCTTTAAATTATACCCTTTAGTGTGAAAACAACATATAGAAATCTTCACTTTCTCTATTTAACTCATACTATCTACTGATTTGTGATTTCACCAAAAAAAAAAATTTGTTAAAGATTGGCACATTTTCAAGTTCAGTATTCATTCGATTTTTGATATCTACATAAAAAAAAAGTGTCCTGGTACTACTCAATATTCCTCAGAACGACTTCATATTCAGGTCTCGAATTCAAAACCTCACATCAAGATTCTTAGGAAATTTCAAGATTGGTTGAAAAACTCATATCCTTCTCTAAGTTTCAAGATTGGTTCCAAATTAAAACTCGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-k0pWa0/sgn_ests_tomato_potato" ref_id="SGN-E213719" ref_strand="+" ref_description="SGN-E213719 [cLEC-76-D18]">
      <seq>caaaaccaagaaatatcaatgtcaaaaaacaatacaatccccctaaaaccaataaacatcagtgtcaaaaatcaacattttatttaaaccaagaaaaaggctatagattcccacaactttgctcttacatcattccaaaatcatttcacctttttccctttaaattataccctttagtgtgaaaacaacatatagaaatcttcactttctctatttaactcatactatctactgatttgtgatttcaccaaaaaaaaaaatttgttaaagattggcacattttcaagttcagtattcattcgatttttgatatctacataaaaaaaagtgtcctggtactactcaatattcctcagaacgacttcatattcaggtctcgaattcaaaacctcacatcaagattcttaggaaatttcaagattggttgaaaaactcatatccttctctaagtttcaagattggttccaaattaaaactcgagacttctgagtaagagcgtacgactagtaatgaacatggacatggaatcatcagaggcaaaattgagatcatcaaaagggtttattaatttggaggaaacatcacaatatttcaacaacattatggaaggcaataagatggagcata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0093P12-2lNi1/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0093P12.2" temp_strand="+" temp_description="C12HBa0093P12.2  AC209662.1 htgs_phase:3 submitted_to_sgn_as:C12HBa0093P12 upload_account_name:italy">
        <position start="45488" stop="46715"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="45788" g_stop="46415" g_length="628"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="627" r_length="627" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0093P12.2" gen_strand="+" ref_id="SGN-E213719" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>628</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0093P12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E213719" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="45788" e_stop="46415"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAAACCAAGAAATATCAATGTCAAAAAACAATACAATCCCCCTAAAACCAATAAACATCAGTGTCAAAAATCAACATTTTATTTAAACCAAGAAAAAGGCTATAGATTCCCACAACTTTGCTCTTACATCATTCCAAAATCATTTCACCTTTTTCCCTTTAAATTATACCCTTTAGTGTGAAAACAACATATAGAAATCTTCACTTTCTCTATTTAACTCATACTATCTACTGATTTGTGATTTCACCAAAAAAAAAAATTTGTTAAAGATTGGCACATTTTCAAGTTCAGTATTCATTCGATTTTTGATATCTACATAAAAAAAAAGTGTCCTGGTACTACTCAATATTCCTCAGAACGACTTCATATTCAGGTCTCGAATTCAAAACCTCACATCAAGATTCTTAGGAAATTTCAAGATTGGTTGAAAAACTCATATCCTTCTCTAAGTTTCAAGATTGGTTCCAAATTAAAACTCGAGACTTCTGAGTAAGAGCGTACGACTAGTAATGAACATGGACATGGAATCATCAGAGGCAAAATTGAGATCATCAAAAGGGTTTATTAATTTGGAGG-AACATCAACAATATTTCAACAACATTATGGAAGGCAATAAGATGGAGCATA</genome_strand>
        <mrna_strand>CAAAACCAAGAAATATCAATGTCAAAAAACAATACAATCCCCCTAAAACCAATAAACATCAGTGTCAAAAATCAACATTTTATTTAAACCAAGAAAAAGGCTATAGATTCCCACAACTTTGCTCTTACATCATTCCAAAATCATTTCACCTTTTTCCCTTTAAATTATACCCTTTAGTGTGAAAACAACATATAGAAATCTTCACTTTCTCTATTTAACTCATACTATCTACTGATTTGTGATTTCACCAAAAAAAAAAATTTGTTAAAGATTGGCACATTTTCAAGTTCAGTATTCATTCGATTTTTGATATCTACAT-AAAAAAAAGTGTCCTGGTACTACTCAATATTCCTCAGAACGACTTCATATTCAGGTCTCGAATTCAAAACCTCACATCAAGATTCTTAGGAAATTTCAAGATTGGTTGAAAAACTCATATCCTTCTCTAAGTTTCAAGATTGGTTCCAAATTAAAACTCGAGACTTCTGAGTAAGAGCGTACGACTAGTAATGAACATGGACATGGAATCATCAGAGGCAAAATTGAGATCATCAAAAGGGTTTATTAATTTGGAGGAAACATC-ACAATATTTCAACAACATTATGGAAGGCAATAAGATGGAGCATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-k0pWa0/sgn_ests_tomato_potato" ref_id="SGN-E228500" ref_strand="+" ref_description="SGN-E228500 [cLED-3-N9]">
      <seq>ataaacatcagtgtcaaaaatcaacattttatttaaaccaagaaaaaggctatagattcccacaactttgctcttacatcattccaaaatcatttcacctttttccctttaaattataccctttagtgtgaaaacaacatatagaaatcttcactttctctatttaactcatactatctactgatttgtgatttcaccaaaaaaaaaaatttgttaaagattggcacattttcaagttcagtattcattcgatttttgatatctacataaaaaaaaagtgtcctggtactactcaatattcctcagaacgacttcatattcaggtctcgaattcaaaacctcacatcaagattcttaggaaatttcaagattggttgaaaaactcatatccttctctaagtttcaagattggttccaaattaaaactcgagacttctgagtaagagcgtacgactagtaatgaacatggacatggaatcatcagaggcaaaattgagatcatcaaaagggtttattaatttggaggaacatcaacaatatttcaacaacattatggaaggcaataagatggagcataagagatcatttacacaaggacatggcaagaaaatgttgtcaatgaattatttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0093P12-2lNi1/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0093P12.2" temp_strand="+" temp_description="C12HBa0093P12.2  AC209662.1 htgs_phase:3 submitted_to_sgn_as:C12HBa0093P12 upload_account_name:italy">
        <position start="45539" stop="46768"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="45839" g_stop="46468" g_length="630"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="630" r_length="630" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0093P12.2" gen_strand="+" ref_id="SGN-E228500" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>630</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0093P12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E228500" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="45839" e_stop="46468"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATAAACATCAGTGTCAAAAATCAACATTTTATTTAAACCAAGAAAAAGGCTATAGATTCCCACAACTTTGCTCTTACATCATTCCAAAATCATTTCACCTTTTTCCCTTTAAATTATACCCTTTAGTGTGAAAACAACATATAGAAATCTTCACTTTCTCTATTTAACTCATACTATCTACTGATTTGTGATTTCACCAAAAAAAAAAATTTGTTAAAGATTGGCACATTTTCAAGTTCAGTATTCATTCGATTTTTGATATCTACATAAAAAAAAAGTGTCCTGGTACTACTCAATATTCCTCAGAACGACTTCATATTCAGGTCTCGAATTCAAAACCTCACATCAAGATTCTTAGGAAATTTCAAGATTGGTTGAAAAACTCATATCCTTCTCTAAGTTTCAAGATTGGTTCCAAATTAAAACTCGAGACTTCTGAGTAAGAGCGTACGACTAGTAATGAACATGGACATGGAATCATCAGAGGCAAAATTGAGATCATCAAAAGGGTTTATTAATTTGGAGGAACATCAACAATATTTCAACAACATTATGGAAGGCAATAAGATGGAGCATAAGAGATCATTTACACAAGGACATGGCAAGAAAATGTTGTCAATGAATTATTTT</genome_strand>
        <mrna_strand>ATAAACATCAGTGTCAAAAATCAACATTTTATTTAAACCAAGAAAAAGGCTATAGATTCCCACAACTTTGCTCTTACATCATTCCAAAATCATTTCACCTTTTTCCCTTTAAATTATACCCTTTAGTGTGAAAACAACATATAGAAATCTTCACTTTCTCTATTTAACTCATACTATCTACTGATTTGTGATTTCACCAAAAAAAAAAATTTGTTAAAGATTGGCACATTTTCAAGTTCAGTATTCATTCGATTTTTGATATCTACATAAAAAAAAAGTGTCCTGGTACTACTCAATATTCCTCAGAACGACTTCATATTCAGGTCTCGAATTCAAAACCTCACATCAAGATTCTTAGGAAATTTCAAGATTGGTTGAAAAACTCATATCCTTCTCTAAGTTTCAAGATTGGTTCCAAATTAAAACTCGAGACTTCTGAGTAAGAGCGTACGACTAGTAATGAACATGGACATGGAATCATCAGAGGCAAAATTGAGATCATCAAAAGGGTTTATTAATTTGGAGGAACATCAACAATATTTCAACAACATTATGGAAGGCAATAAGATGGAGCATAAGAGATCATTTACACAAGGACATGGCAAGAAAATGTTGTCAATGAATTATTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-k0pWa0/sgn_ests_tomato_potato" ref_id="SGN-E239948" ref_strand="+" ref_description="SGN-E239948 [cLED-29-D5]">
      <seq>ataaacatcagtgtcaaaaatcaacattttatttaaaccaagaaaaaggctatagattcccacaactttgctcttacatcattccaaaatcatttcacctttttccctttaaattataccctttagtgtgaaaacaacatatagaaatcttcactttctctatttaactcatactatctactgatttgtgatttcaccaaaaaaaaaaatttgttaaagattggcacattttca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0093P12-2lNi1/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0093P12.2" temp_strand="+" temp_description="C12HBa0093P12.2  AC209662.1 htgs_phase:3 submitted_to_sgn_as:C12HBa0093P12 upload_account_name:italy">
        <position start="45539" stop="46372"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="45839" g_stop="46072" g_length="234"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="234" r_length="234" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0093P12.2" gen_strand="+" ref_id="SGN-E239948" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>234</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0093P12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E239948" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="45839" e_stop="46072"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATAAACATCAGTGTCAAAAATCAACATTTTATTTAAACCAAGAAAAAGGCTATAGATTCCCACAACTTTGCTCTTACATCATTCCAAAATCATTTCACCTTTTTCCCTTTAAATTATACCCTTTAGTGTGAAAACAACATATAGAAATCTTCACTTTCTCTATTTAACTCATACTATCTACTGATTTGTGATTTCACCAAAAAAAAAAATTTGTTAAAGATTGGCACATTTTCA</genome_strand>
        <mrna_strand>ATAAACATCAGTGTCAAAAATCAACATTTTATTTAAACCAAGAAAAAGGCTATAGATTCCCACAACTTTGCTCTTACATCATTCCAAAATCATTTCACCTTTTTCCCTTTAAATTATACCCTTTAGTGTGAAAACAACATATAGAAATCTTCACTTTCTCTATTTAACTCATACTATCTACTGATTTGTGATTTCACCAAAAAAAAAAATTTGTTAAAGATTGGCACATTTTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-k0pWa0/sgn_ests_tomato_potato" ref_id="SGN-E283546" ref_strand="+" ref_description="SGN-E283546 [cLER-12-N17]">
      <seq>tgatttgtgatttcaccaaaaaaaaaaatttgttaaagattggcacattttcaagttcagtattcattcgatttttgatatctacataaaaaaaaagtgtcctggtactactcaatattcctcagaacgacttcatattcaggtctcgaattcaaaacctcacatcaagattcttaggaaatttcaagattggttgaaaaactcatatccttctctaagtttcaagattggttccaaattaaaactcgagacttctgagtaagagcgtacgactagtaatgaacatggacatggaatcatcagaggcaaaattgagatcatcaaaagggtttattaatttggaggaacatcaacaatatttcaacaacattatggaaggcaataagatggagcataagagatcatttacacaaggacatggcaagaaaatgttgtcaatgaattattttagcttagagtcaattattttgttacttggtcttacagcatctttgttacttttgccattgatgcttccaccattgccaccaccaccttttatgttgttgttagtcccaattttcattcttgttgttcttatgatcttagcttttatgccttctaatgttaggaatgtgacttgctcatatcttta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0093P12-2lNi1/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0093P12.2" temp_strand="+" temp_description="C12HBa0093P12.2  AC209662.1 htgs_phase:3 submitted_to_sgn_as:C12HBa0093P12 upload_account_name:italy">
        <position start="45720" stop="46953"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="46020" g_stop="46653" g_length="634"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="634" r_length="634" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0093P12.2" gen_strand="+" ref_id="SGN-E283546" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>634</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0093P12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E283546" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="46020" e_stop="46653"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGATTTGTGATTTCACCAAAAAAAAAAATTTGTTAAAGATTGGCACATTTTCAAGTTCAGTATTCATTCGATTTTTGATATCTACATAAAAAAAAAGTGTCCTGGTACTACTCAATATTCCTCAGAACGACTTCATATTCAGGTCTCGAATTCAAAACCTCACATCAAGATTCTTAGGAAATTTCAAGATTGGTTGAAAAACTCATATCCTTCTCTAAGTTTCAAGATTGGTTCCAAATTAAAACTCGAGACTTCTGAGTAAGAGCGTACGACTAGTAATGAACATGGACATGGAATCATCAGAGGCAAAATTGAGATCATCAAAAGGGTTTATTAATTTGGAGGAACATCAACAATATTTCAACAACATTATGGAAGGCAATAAGATGGAGCATAAGAGATCATTTACACAAGGACATGGCAAGAAAATGTTGTCAATGAATTATTTTAGCTTAGAGTCAATTATTTTGTTACTTGGTCTTACAGCATCTTTGTTACTTTTGCCATTGATGCTTCCACCATTGCCACCACCACCTTTTATGTTGTTGTTAGTCCCAATTTTCATTCTTGTTGTTCTTATGATCTTAGCTTTTATGCCTTCTAATGTTAGGAATGTGACTTGCTCATATCTTTA</genome_strand>
        <mrna_strand>TGATTTGTGATTTCACCAAAAAAAAAAATTTGTTAAAGATTGGCACATTTTCAAGTTCAGTATTCATTCGATTTTTGATATCTACATAAAAAAAAAGTGTCCTGGTACTACTCAATATTCCTCAGAACGACTTCATATTCAGGTCTCGAATTCAAAACCTCACATCAAGATTCTTAGGAAATTTCAAGATTGGTTGAAAAACTCATATCCTTCTCTAAGTTTCAAGATTGGTTCCAAATTAAAACTCGAGACTTCTGAGTAAGAGCGTACGACTAGTAATGAACATGGACATGGAATCATCAGAGGCAAAATTGAGATCATCAAAAGGGTTTATTAATTTGGAGGAACATCAACAATATTTCAACAACATTATGGAAGGCAATAAGATGGAGCATAAGAGATCATTTACACAAGGACATGGCAAGAAAATGTTGTCAATGAATTATTTTAGCTTAGAGTCAATTATTTTGTTACTTGGTCTTACAGCATCTTTGTTACTTTTGCCATTGATGCTTCCACCATTGCCACCACCACCTTTTATGTTGTTGTTAGTCCCAATTTTCATTCTTGTTGTTCTTATGATCTTAGCTTTTATGCCTTCTAATGTTAGGAATGTGACTTGCTCATATCTTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-k0pWa0/sgn_ests_tomato_potato" ref_id="SGN-E376658" ref_strand="+" ref_description="SGN-E376658 [TUS-18-K16]">
      <seq>ttttttttatgtaaaaaacaagtgaatctactttgatattttcttctaaattaaaccacacaattaaagatatgagcaagtcacattcctaacattagaaggcataaaagctaagatcataagaacaacaagaatgaaaattgggactaacaacaacataaaaggtggtggtggcaatggtggaagcatcaatggcaaaagtaacaaagatgctgtaagaccaagtaacaaaataattgactctaagctaaaataattcattgacaacattttcttgccatgtccttgtgtaaatgatctcttatgctccatcttattgccttccataatgttgttgaaatattgttgatgttcctccaaattaataaacccttttgatgatctcaattttgcctctgatgattccatgtccatgttcattactagtcgtacgctcttactcagaagtctcgagttttaatttggaaccaatcttgaaacttagagaaggatatgagtttttcaaccaatcttgaaatttcctaagaatcttgatgtgaggttttgaattcgagacctgaatatgaagtcgttctgaggaatattgagtagtaccaggacactttttttttatgtagatatcaaaaatcgaatgaatactgaacttgaaaatgtgccaatctttaacaaattttttttttggtgaaatcacaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0093P12-2lNi1/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0093P12.2" temp_strand="-" temp_description="C12HBa0093P12.2  AC209662.1 htgs_phase:3 submitted_to_sgn_as:C12HBa0093P12 upload_account_name:italy">
        <position start="47011" stop="45723"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="46717" g_stop="46023" g_length="695"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="694" r_length="694" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0093P12.2" gen_strand="-" ref_id="SGN-E376658" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>695</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0093P12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E376658" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="46717" e_stop="46023"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAATCATTATGTAAAAAACAAGTGAATCTACTTTGATATTTTCTTCTAAATTAAACCACACAATTAAAGATATGAGCAAGTCACATTCCTAACATTAGAAGGCATAAAAGCTAAGATCATAAGAACAACAAGAATGAAAATTGGGACTAACAACAACATAAAAGGTGGTGGTGGCAATGGTGGAAGCATCAATGGCAAAAGTAACAAAGATGCTGTAAGACCAAGTAACAAAATAATTGACTCTAAGCTAAAATAATTCATTGACAACATTTTCTTGCCATGTCCTTGTGTAAATGATCTCTTATGCTCCATCTTATTGCCTTCCATAATGTTGTTGAAATATTGTTGATGTTCCTCCAAATTAATAAACCCTTTTGATGATCTCAATTTTGCCTCTGATGATTCCATGTCCATGTTCATTACTAGTCGTACGCTCTTACTCAGAAGTCTCGAGTTTTAATTTGGAACCAATCTTGAAACTTAGAGAAGGATATGAGTTTTTCAACCAATCTTGAAATTTCCTAAGAATCTTGATGTGAGGTTTTGAATTCGAGACCTGAATATGAAGTCGTTCTGAGGAATATTGAGTAGTACCAGGACACTTTTTTTTTATGTAGATATCAAAAATCGAATGAATACTGAACTTGAAAATGTGCCAATCTTTAACAAATTTTTTTTTTTGGTGAAATCACAAA</genome_strand>
        <mrna_strand>TTTTTTTTATGTAAAAAACAAGTGAATCTACTTTGATATTTTCTTCTAAATTAAACCACACAATTAAAGATATGAGCAAGTCACATTCCTAACATTAGAAGGCATAAAAGCTAAGATCATAAGAACAACAAGAATGAAAATTGGGACTAACAACAACATAAAAGGTGGTGGTGGCAATGGTGGAAGCATCAATGGCAAAAGTAACAAAGATGCTGTAAGACCAAGTAACAAAATAATTGACTCTAAGCTAAAATAATTCATTGACAACATTTTCTTGCCATGTCCTTGTGTAAATGATCTCTTATGCTCCATCTTATTGCCTTCCATAATGTTGTTGAAATATTGTTGATGTTCCTCCAAATTAATAAACCCTTTTGATGATCTCAATTTTGCCTCTGATGATTCCATGTCCATGTTCATTACTAGTCGTACGCTCTTACTCAGAAGTCTCGAGTTTTAATTTGGAACCAATCTTGAAACTTAGAGAAGGATATGAGTTTTTCAACCAATCTTGAAATTTCCTAAGAATCTTGATGTGAGGTTTTGAATTCGAGACCTGAATATGAAGTCGTTCTGAGGAATATTGAGTAGTACCAGGACACTTTTTTTTTATGTAGATATCAAAAATCGAATGAATACTGAACTTGAAAATGTGCCAATCTTTAACAAA-TTTTTTTTTTGGTGAAATCACAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-k0pWa0/sgn_ests_tomato_potato" ref_id="SGN-E333375" ref_strand="+" ref_description="SGN-E333375 [cTOD-20-E6]">
      <seq>tcacattcctaacattagaaggcataaaagctaagatcataagaacaacaagaatgaaaattgggactaacaacaacataaaaggtggtggtggcaatggtggaagcatcaatggcaaaagtaacaaagatgctgtaagaccaagtaacaaaataattgactctaagctaaaataattcattgacaacattttcttgccatgtccttgtgtaaatgatctcttatgctccatcttattgccttccataatgttgttgaaatattgttgatgttcctccaaattaataaacccttttgatgatctcaattttgcctctgatgattccatgtccatgttcattactagtcgtacgctcttactcagaagtctcgagttttaatttggaaccaatcttgnaacttagagaaagatatgagtttttcaaccaatcttgaaatttcctaagaatcttgatgtgaggttttgaattcgagacctgaatatgaagtcgttctgaagaatattgagtagtaccaggacactttttttttatgtagatatcaaaaatcgaatgaatactgaacttgaaaatgtgcccatctttaacaaatttttttttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0093P12-2lNi1/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0093P12.2" temp_strand="-" temp_description="C12HBa0093P12.2  AC209662.1 htgs_phase:3 submitted_to_sgn_as:C12HBa0093P12 upload_account_name:italy">
        <position start="46937" stop="45738"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="46637" g_stop="46038" g_length="600"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="600" r_length="600" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0093P12.2" gen_strand="-" ref_id="SGN-E333375" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>600</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0093P12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E333375" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="46637" e_stop="46038"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCACATTCCTAACATTAGAAGGCATAAAAGCTAAGATCATAAGAACAACAAGAATGAAAATTGGGACTAACAACAACATAAAAGGTGGTGGTGGCAATGGTGGAAGCATCAATGGCAAAAGTAACAAAGATGCTGTAAGACCAAGTAACAAAATAATTGACTCTAAGCTAAAATAATTCATTGACAACATTTTCTTGCCATGTCCTTGTGTAAATGATCTCTTATGCTCCATCTTATTGCCTTCCATAATGTTGTTGAAATATTGTTGATGTTCCTCCAAATTAATAAACCCTTTTGATGATCTCAATTTTGCCTCTGATGATTCCATGTCCATGTTCATTACTAGTCGTACGCTCTTACTCAGAAGTCTCGAGTTTTAATTTGGAACCAATCTTGAAACTTAGAGAAGGATATGAGTTTTTCAACCAATCTTGAAATTTCCTAAGAATCTTGATGTGAGGTTTTGAATTCGAGACCTGAATATGAAGTCGTTCTGAGGAATATTGAGTAGTACCAGGACACTTTTTTTTTATGTAGATATCAAAAATCGAATGAATACTGAACTTGAAAATGTGCCAATCTTTAACAAATTTTTTTTTT</genome_strand>
        <mrna_strand>TCACATTCCTAACATTAGAAGGCATAAAAGCTAAGATCATAAGAACAACAAGAATGAAAATTGGGACTAACAACAACATAAAAGGTGGTGGTGGCAATGGTGGAAGCATCAATGGCAAAAGTAACAAAGATGCTGTAAGACCAAGTAACAAAATAATTGACTCTAAGCTAAAATAATTCATTGACAACATTTTCTTGCCATGTCCTTGTGTAAATGATCTCTTATGCTCCATCTTATTGCCTTCCATAATGTTGTTGAAATATTGTTGATGTTCCTCCAAATTAATAAACCCTTTTGATGATCTCAATTTTGCCTCTGATGATTCCATGTCCATGTTCATTACTAGTCGTACGCTCTTACTCAGAAGTCTCGAGTTTTAATTTGGAACCAATCTTGNAACTTAGAGAAAGATATGAGTTTTTCAACCAATCTTGAAATTTCCTAAGAATCTTGATGTGAGGTTTTGAATTCGAGACCTGAATATGAAGTCGTTCTGAAGAATATTGAGTAGTACCAGGACACTTTTTTTTTATGTAGATATCAAAAATCGAATGAATACTGAACTTGAAAATGTGCCCATCTTTAACAAATTTTTTTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-k0pWa0/sgn_ests_tomato_potato" ref_id="SGN-E288660" ref_strand="+" ref_description="SGN-E288660 [cLES-8-F8]">
      <seq>tcattcgatttttgatatctacataaaaaaaaagtgtcctggtactactcaatattcctcagaacgacttcatattcaggtctcgaattcaaaacctcacatcaagattcttaggaaatttcaagattggttgaaaaactcatatccttctctaagtttcaagattggttccaaattaaaactcgagacttctgagtaagagcgtacgactagtaatgaacatggacatggnatcatcagaggcaaaattgagatcatcaaaagggtttattaatttggaggaacatcaacaatatttcaacaacattatggaaggcaataagatggagcataagagatcatttacacaaggacatggcaagaaaatgttgtcaatgaattattttagcttagagtcaattattttggtacttggtcttacagcatctttgttactt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0093P12-2lNi1/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0093P12.2" temp_strand="+" temp_description="C12HBa0093P12.2  AC209662.1 htgs_phase:3 submitted_to_sgn_as:C12HBa0093P12 upload_account_name:italy">
        <position start="45783" stop="46819"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="46083" g_stop="46519" g_length="437"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="437" r_length="437" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0093P12.2" gen_strand="+" ref_id="SGN-E288660" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>437</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0093P12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E288660" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="46083" e_stop="46519"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCATTCGATTTTTGATATCTACATAAAAAAAAAGTGTCCTGGTACTACTCAATATTCCTCAGAACGACTTCATATTCAGGTCTCGAATTCAAAACCTCACATCAAGATTCTTAGGAAATTTCAAGATTGGTTGAAAAACTCATATCCTTCTCTAAGTTTCAAGATTGGTTCCAAATTAAAACTCGAGACTTCTGAGTAAGAGCGTACGACTAGTAATGAACATGGACATGGAATCATCAGAGGCAAAATTGAGATCATCAAAAGGGTTTATTAATTTGGAGGAACATCAACAATATTTCAACAACATTATGGAAGGCAATAAGATGGAGCATAAGAGATCATTTACACAAGGACATGGCAAGAAAATGTTGTCAATGAATTATTTTAGCTTAGAGTCAATTATTTTGTTACTTGGTCTTACAGCATCTTTGTTACTT</genome_strand>
        <mrna_strand>TCATTCGATTTTTGATATCTACATAAAAAAAAAGTGTCCTGGTACTACTCAATATTCCTCAGAACGACTTCATATTCAGGTCTCGAATTCAAAACCTCACATCAAGATTCTTAGGAAATTTCAAGATTGGTTGAAAAACTCATATCCTTCTCTAAGTTTCAAGATTGGTTCCAAATTAAAACTCGAGACTTCTGAGTAAGAGCGTACGACTAGTAATGAACATGGACATGGNATCATCAGAGGCAAAATTGAGATCATCAAAAGGGTTTATTAATTTGGAGGAACATCAACAATATTTCAACAACATTATGGAAGGCAATAAGATGGAGCATAAGAGATCATTTACACAAGGACATGGCAAGAAAATGTTGTCAATGAATTATTTTAGCTTAGAGTCAATTATTTTGGTACTTGGTCTTACAGCATCTTTGTTACTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-k0pWa0/sgn_ests_tomato_potato" ref_id="SGN-E338285" ref_strand="+" ref_description="SGN-E338285 [cTOE-13-B3]">
      <seq>taaaaaaaaagtgtcctggtactactcaatattcctcagaacgacttcatattcaggtctcgaattcaaaacctcacatcaagattcttaggaaatttcaagattggttgaaaaactcatatccttctctaagtttcaagattggttccaaattaaaactcgagacttctgagtaagagcgtacgactagtaatgaacatggacatggaatcatcagaggcaaaattgagatcatcaaaagggtttattaatttggaggaacatcaacaatatttcaacaacattat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0093P12-2lNi1/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0093P12.2" temp_strand="+" temp_description="C12HBa0093P12.2  AC209662.1 htgs_phase:3 submitted_to_sgn_as:C12HBa0093P12 upload_account_name:italy">
        <position start="45806" stop="46692"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="46106" g_stop="46392" g_length="287"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="287" r_length="287" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0093P12.2" gen_strand="+" ref_id="SGN-E338285" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>287</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0093P12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E338285" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="46106" e_stop="46392"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAAAAAAAAAGTGTCCTGGTACTACTCAATATTCCTCAGAACGACTTCATATTCAGGTCTCGAATTCAAAACCTCACATCAAGATTCTTAGGAAATTTCAAGATTGGTTGAAAAACTCATATCCTTCTCTAAGTTTCAAGATTGGTTCCAAATTAAAACTCGAGACTTCTGAGTAAGAGCGTACGACTAGTAATGAACATGGACATGGAATCATCAGAGGCAAAATTGAGATCATCAAAAGGGTTTATTAATTTGGAGGAACATCAACAATATTTCAACAACATTAT</genome_strand>
        <mrna_strand>TAAAAAAAAAGTGTCCTGGTACTACTCAATATTCCTCAGAACGACTTCATATTCAGGTCTCGAATTCAAAACCTCACATCAAGATTCTTAGGAAATTTCAAGATTGGTTGAAAAACTCATATCCTTCTCTAAGTTTCAAGATTGGTTCCAAATTAAAACTCGAGACTTCTGAGTAAGAGCGTACGACTAGTAATGAACATGGACATGGAATCATCAGAGGCAAAATTGAGATCATCAAAAGGGTTTATTAATTTGGAGGAACATCAACAATATTTCAACAACATTAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-k0pWa0/sgn_ests_tomato_potato" ref_id="SGN-E342303" ref_strand="-" ref_description="SGN-E342303 [cTOF-8-M10]">
      <seq>ttattaatttggaggaacatcaacaatatttcaacaacattatggaaggcaataagatggagcataagagatcatttacacaaggacatggcaagaaaatgttgtcaatgaattattttagcttagagtcaattattttgttacttggtcttacagcatctttgttacttttgccattgatgcttccaccattgccaccaccaccttttatgttgttgttagtcccaattttcattcttgttgttcttatgatcttagcttttatgccttctaatgttaggaatgtgacttgctcatatctttaattgtgtggtttaatttagaagaaaatatcaaagtagattcacttgttttttacataatgattaaatacatttttttcaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0093P12-2lNi1/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0093P12.2" temp_strand="+" temp_description="C12HBa0093P12.2  AC209662.1 htgs_phase:3 submitted_to_sgn_as:C12HBa0093P12 upload_account_name:italy">
        <position start="46050" stop="47033"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="46350" g_stop="46732" g_length="383"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="383" r_length="383" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="384" polyA_stop="404"/>
      <MATCH_line gen_id="C12HBa0093P12.2" gen_strand="+" ref_id="SGN-E342303" ref_strand="-">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>383</cumulative_length_of_scored_exons>
        <coverage percentage="0.948" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0093P12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E342303" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="46350" e_stop="46732"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTATTAATTTGGAGGAACATCAACAATATTTCAACAACATTATGGAAGGCAATAAGATGGAGCATAAGAGATCATTTACACAAGGACATGGCAAGAAAATGTTGTCAATGAATTATTTTAGCTTAGAGTCAATTATTTTGTTACTTGGTCTTACAGCATCTTTGTTACTTTTGCCATTGATGCTTCCACCATTGCCACCACCACCTTTTATGTTGTTGTTAGTCCCAATTTTCATTCTTGTTGTTCTTATGATCTTAGCTTTTATGCCTTCTAATGTTAGGAATGTGACTTGCTCATATCTTTAATTGTGTGGTTTAATTTAGAAGAAAATATCAAAGTAGATTCACTTGTTTTTTACATAATGATTAAATACATTTTTTTCA</genome_strand>
        <mrna_strand>TTATTAATTTGGAGGAACATCAACAATATTTCAACAACATTATGGAAGGCAATAAGATGGAGCATAAGAGATCATTTACACAAGGACATGGCAAGAAAATGTTGTCAATGAATTATTTTAGCTTAGAGTCAATTATTTTGTTACTTGGTCTTACAGCATCTTTGTTACTTTTGCCATTGATGCTTCCACCATTGCCACCACCACCTTTTATGTTGTTGTTAGTCCCAATTTTCATTCTTGTTGTTCTTATGATCTTAGCTTTTATGCCTTCTAATGTTAGGAATGTGACTTGCTCATATCTTTAATTGTGTGGTTTAATTTAGAAGAAAATATCAAAGTAGATTCACTTGTTTTTTACATAATGATTAAATACATTTTTTTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-k0pWa0/sgn_ests_tomato_potato" ref_id="SGN-E734068" ref_strand="+" ref_description="SGN-E734068 [LB11CG09]">
      <seq>gatagctgctgaggctggtattataaatccaagtttagctgttgcaaaagttcgcccagctgattacgaaagtgcagctaatcgtgcttgtgcaactggacttgagggtgcgaaatctgaatttcctcgtgtagaagctgataacttgccatacctatgcatggatctcgtctatcaatacactctacttgtagatggattcggacttgaacctcatcaagaaatgacattggtgaaaaaagttgaatacaagaattcctttgttgaagcagcatggccattaggcagtgccattgaagttgcatcatcattgagttaaacttaactgggaaatggaaaggataggttccattcatgcaattttgggttttaatagtttatgtatttttgacttgcagcttctgataagcctattaggttaatgttctgaagcagaagggattgccatagtccatagcaggttgagattctttatttttcccttttttattaaaagggaatcaagaatagtgataaatctgtttgtaatcatgtattatgagaattatgcactatttaaatgagatcaatttttgataaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0093P12-2lNi1/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0093P12.2" temp_strand="-" temp_description="C12HBa0093P12.2  AC209662.1 htgs_phase:3 submitted_to_sgn_as:C12HBa0093P12 upload_account_name:italy">
        <position start="48703" stop="47446"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="48499" g_stop="48487" g_length="13"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="13" r_length="13" r_score="0.846"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="48486" i_stop="48398" i_length="89">
            <donor d_prob="0.968" d_score="0.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="48397" g_stop="48208" g_length="190"/>
          <reference_exon_boundary r_type="cDNA" r_start="14" r_stop="203" r_length="190" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="48207" i_stop="48123" i_length="85">
            <donor d_prob="0.962" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="48122" g_stop="47749" g_length="374"/>
          <reference_exon_boundary r_type="cDNA" r_start="204" r_stop="577" r_length="374" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="578" polyA_stop="591"/>
      <MATCH_line gen_id="C12HBa0093P12.2" gen_strand="-" ref_id="SGN-E734068" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>577</cumulative_length_of_scored_exons>
        <coverage percentage="0.976" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0093P12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E734068" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="48499" e_stop="48487"/>
          <exon e_start="48397" e_stop="48208"/>
          <exon e_start="48122" e_stop="47749"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGAGCTGCTGAGGTATGAATCCCTGTAGTTAAATCTAATGAGTTAAGAAACTTCTCTCCCTTGTATGTCTCTGACACAAATGTTATATGTTGTGGGCATAGGCTGGTATTATAAATCCAAGTTTAGCTGTTGCAAAAGTTCGCCCAGCTGATTACGAAAGTGCAGCTAATCGTGCTTGTGCAACTGGACTTGAGGGTGCGAAATCTGAATTTCCTCGTGTAGAAGCTGATAACTTGCCATACCTATGCATGGATCTCGTCTATCAATACACTCTACTTGTAGATGGATTCGGTGAGTAAAAACTTTCATATTTCAGTAAAAGTTCACACGAAATTCATTTCAATTACGTTACTCAATACTATTTCTTACTTTGCAGGACTTGAACCTCATCAAGAAATGACATTGGTGAAAAAAGTTGAATACAAGAATTCCTTTGTTGAAGCAGCATGGCCATTAGGCAGTGCCATTGAAGTTGCATCATCATTGAGTTAAACTTAACTGGGAAATGGAAAGGATAGGTTCCATTCATGCAATTTTGGGTTTTAATAGTTTATGTATTTTTGACTTGCAGCTTCTGATAAGCCTATTAGGTTAATGTTCTGAAGCAGAAGGGATTGCCATAGTCCATAGCAGGTTGAGATTCTTTATTTTTCCCTTTTTTATTAAAAGGGAATCAAGAATAGTGATAAATCTGTTTGTAATCATGTATTATGAGAATTATGCACTATTTAAATGAGATCAATTTTTGAT</genome_strand>
        <mrna_strand>GATAGCTGCTGAG.........................................................................................GCTGGTATTATAAATCCAAGTTTAGCTGTTGCAAAAGTTCGCCCAGCTGATTACGAAAGTGCAGCTAATCGTGCTTGTGCAACTGGACTTGAGGGTGCGAAATCTGAATTTCCTCGTGTAGAAGCTGATAACTTGCCATACCTATGCATGGATCTCGTCTATCAATACACTCTACTTGTAGATGGATTCG.....................................................................................GACTTGAACCTCATCAAGAAATGACATTGGTGAAAAAAGTTGAATACAAGAATTCCTTTGTTGAAGCAGCATGGCCATTAGGCAGTGCCATTGAAGTTGCATCATCATTGAGTTAAACTTAACTGGGAAATGGAAAGGATAGGTTCCATTCATGCAATTTTGGGTTTTAATAGTTTATGTATTTTTGACTTGCAGCTTCTGATAAGCCTATTAGGTTAATGTTCTGAAGCAGAAGGGATTGCCATAGTCCATAGCAGGTTGAGATTCTTTATTTTTCCCTTTTTTATTAAAAGGGAATCAAGAATAGTGATAAATCTGTTTGTAATCATGTATTATGAGAATTATGCACTATTTAAATGAGATCAATTTTTGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-k0pWa0/sgn_ests_tomato_potato" ref_id="SGN-E697566" ref_strand="+" ref_description="SGN-E697566 [FA03BF10]">
      <seq>cgataagctccaaaggtatcagatggagaggatacatacgttcaggaaatgtttttgaaagggacaaaatactacctttacgttcacagctatttgcactatggcttactagcagctcgagctgagatcttgaaggtttctggtgaatctggaagtccttgcatcttgggaggccaccacgggacatacaagtatggaggagcagtttacccagcatcggccacgtctcaaggttcaagcatgagtacttgtagggaggtagctctaaaggctctgaaaattaatgaaccagcatgtacccacatgaagtgtacctttggtggcgtgtggaatggtggaggaggagatggacagaagaatatgtttgttgcttcgtttttctttgacagagctgctgaggctggtattataaatccaagtttagctgttgcaaaagttcgcccagctgattacgaaagtgcagctaatcgtgcttgtgcaactggacttgagggtgcgaaatctgaatttcctcgtgtagaagctgataacttgccatacctatgcatggatctcgtctatcaatacactctacttgtagatggattcggacttgaacctcatcaagaaatgacattggtgaaaaaagttgaatacaacaattcctttgttgaagcagcatggcccttaggcagtgccattgaagttgcatcatcattgagttaaacttaactgggaaatggaagggat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0093P12-2lNi1/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0093P12.2" temp_strand="-" temp_description="C12HBa0093P12.2  AC209662.1 htgs_phase:3 submitted_to_sgn_as:C12HBa0093P12 upload_account_name:italy">
        <position start="49696" stop="47683"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="49396" g_stop="49308" g_length="89"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="89" r_length="89" r_score="0.978"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="49307" i_stop="49100" i_length="208">
            <donor d_prob="0.914" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="49099" g_stop="49008" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="90" r_stop="181" r_length="92" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="49007" i_stop="48705" i_length="303">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.978" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="48704" g_stop="48487" g_length="218"/>
          <reference_exon_boundary r_type="cDNA" r_start="182" r_stop="399" r_length="218" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="48486" i_stop="48398" i_length="89">
            <donor d_prob="0.968" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="48397" g_stop="48208" g_length="190"/>
          <reference_exon_boundary r_type="cDNA" r_start="400" r_stop="589" r_length="190" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="48207" i_stop="48123" i_length="85">
            <donor d_prob="0.962" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="48122" g_stop="47983" g_length="140"/>
          <reference_exon_boundary r_type="cDNA" r_start="590" r_stop="729" r_length="140" r_score="0.979"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0093P12.2" gen_strand="-" ref_id="SGN-E697566" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>729</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0093P12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E697566" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="49396" e_stop="49308"/>
          <exon e_start="49099" e_stop="49008"/>
          <exon e_start="48704" e_stop="48487"/>
          <exon e_start="48397" e_stop="48208"/>
          <exon e_start="48122" e_stop="47983"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAAAAGCTCCAAAGGTATCAGATGGAGAGGATACATACGTTCAGGAAATGTTTTTGAAAGGGACAAAATACTACCTTTACGTTCACAGGTCCTTCTCATCCTCTATACATAATTATGTGATGATATTAGAGAATGTCAGCATATCCATTTTGTGCTCTCCAACTTTTTGATCAGGATGAACCTGTGATCCATCTAGTGGCAAGAACATATTTGTCTTGTTATTCAGAGTGGGCTTATCTTGTACTTCGTCATCTTCATTGTACAGGCTTAATGTGATCTATATTTATTGCTTACAGCTATTTGCACTATGGCTTACTAGCAGCTCGAGCTGAGATCTTGAAGGTTTCTGGTGAATCTGGAAGTCCTTGCATCTTGGGAGGCCACCACGGTATTTCTCTCTCTCTCTCCTGGTGCAATGATTATTCTATACTTGCTTCTTTTGATGCAGTGCTTTCAGAAGCATCATTTCTATCTGTAAGACATAAAAGCGGAGGTTAACAAAGAGAAAAAAACTCCCCCCTACCCTTAACTGAATTGTCATATCTTATCTTAGTCACACAGATAAGTTGCAGAAATAGGAGCACTGGGTCCTTAATTTACATTGAGCCTGTATACTGTAATTAGAAAAGTAAGTATTCATTTTCCTGGATTAGCAAGTATCTCATTGAAGATGAACAATATCATTTTGCAGGGACATACAAGTATGGAGGAGCAGTTTACCCAGCATCGGCCACGTCTCAAGGTTCAAGCATGAGTACTTGTAGGGAGGTAGCTCTAAAGGCTCTGAAAATTAATGAACCAGCATGTACCCACATGAAGTGTACCTTTGGTGGCGTGTGGAATGGTGGAGGAGGAGATGGACAGAAGAATATGTTTGTTGCTTCGTTTTTCTTTGACAGAGCTGCTGAGGTATGAATCCCTGTAGTTAAATCTAATGAGTTAAGAAACTTCTCTCCCTTGTATGTCTCTGACACAAATGTTATATGTTGTGGGCATAGGCTGGTATTATAAATCCAAGTTTAGCTGTTGCAAAAGTTCGCCCAGCTGATTACGAAAGTGCAGCTAATCGTGCTTGTGCAACTGGACTTGAGGGTGCGAAATCTGAATTTCCTCGTGTAGAAGCTGATAACTTGCCATACCTATGCATGGATCTCGTCTATCAATACACTCTACTTGTAGATGGATTCGGTGAGTAAAAACTTTCATATTTCAGTAAAAGTTCACACGAAATTCATTTCAATTACGTTACTCAATACTATTTCTTACTTTGCAGGACTTGAACCTCATCAAGAAATGACATTGGTGAAAAAAGTTGAATACAAGAATTCCTTTGTTGAAGCAGCATGGCCATTAGGCAGTGCCATTGAAGTTGCATCATCATTGAGTTAAACTTAACTGGGAAATGGAAAGGAT</genome_strand>
        <mrna_strand>CGATAAGCTCCAAAGGTATCAGATGGAGAGGATACATACGTTCAGGAAATGTTTTTGAAAGGGACAAAATACTACCTTTACGTTCACAG................................................................................................................................................................................................................CTATTTGCACTATGGCTTACTAGCAGCTCGAGCTGAGATCTTGAAGGTTTCTGGTGAATCTGGAAGTCCTTGCATCTTGGGAGGCCACCACG...............................................................................................................................................................................................................................................................................................................GGACATACAAGTATGGAGGAGCAGTTTACCCAGCATCGGCCACGTCTCAAGGTTCAAGCATGAGTACTTGTAGGGAGGTAGCTCTAAAGGCTCTGAAAATTAATGAACCAGCATGTACCCACATGAAGTGTACCTTTGGTGGCGTGTGGAATGGTGGAGGAGGAGATGGACAGAAGAATATGTTTGTTGCTTCGTTTTTCTTTGACAGAGCTGCTGAG.........................................................................................GCTGGTATTATAAATCCAAGTTTAGCTGTTGCAAAAGTTCGCCCAGCTGATTACGAAAGTGCAGCTAATCGTGCTTGTGCAACTGGACTTGAGGGTGCGAAATCTGAATTTCCTCGTGTAGAAGCTGATAACTTGCCATACCTATGCATGGATCTCGTCTATCAATACACTCTACTTGTAGATGGATTCG.....................................................................................GACTTGAACCTCATCAAGAAATGACATTGGTGAAAAAAGTTGAATACAACAATTCCTTTGTTGAAGCAGCATGGCCCTTAGGCAGTGCCATTGAAGTTGCATCATCATTGAGTTAAACTTAACTGGGAAATGGAAGGGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-k0pWa0/sgn_ests_tomato_potato" ref_id="SGN-E419693" ref_strand="+" ref_description="SGN-E419693 [STM-30-E19]">
      <seq>atttgcttatccttccggtagtctctgatcggcggcagcatttgtgatccagagacctaaaaggacggtgaagaattcgagctggagacccaggagactccggcgccgggaaacggcaagatccgatatcgatcaccttcggcagccgagcttttagaggcacagctcgatccacttcaaatggagaagacaatgaagcgaaacaacagacagtatggtggtgagtcattctccgataagatccagaggtataaaggtgtgatccttgtgatttgcgttccgttgtttctcgtttctctagtgctttatgtaatgccgacgcgttatccgtctgattcgatggaatcgttaaatcggaaattctctccgaatctcggatctatgaaatatgcggttatatttgatgctggaagttcgggtagtagagttcatgtcttctgttttgatgagaatttggatcttgttcccattggcaatgaactcgaacttttcgtgcagaaaaaaccaggtctgagttcatttgctagtgatcctatggctgctgcggattctcttctaccacttttaaaggacgcagagaatgtagttccacgcaatttgcgcagtaatacaccagtgagagttggggccactgcaggtttgaggcagttggaaggtgacgcatctgacaggattcttcaagcggtgagggatttccctgagagcaaagcagcttcaaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0093P12-2lNi1/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0093P12.2" temp_strand="-" temp_description="C12HBa0093P12.2  AC209662.1 htgs_phase:3 submitted_to_sgn_as:C12HBa0093P12 upload_account_name:italy">
        <position start="52874" stop="51005"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="52574" g_stop="52077" g_length="498"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="498" r_length="498" r_score="0.988"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="52076" i_stop="51589" i_length="488">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.951" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="51588" g_stop="51460" g_length="129"/>
          <reference_exon_boundary r_type="cDNA" r_start="499" r_stop="627" r_length="129" r_score="0.977"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="51459" i_stop="51367" i_length="93">
            <donor d_prob="0.860" d_score="1.00"/>
            <acceptor a_prob="0.515" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="51366" g_stop="51310" g_length="57"/>
          <reference_exon_boundary r_type="cDNA" r_start="628" r_stop="684" r_length="57" r_score="0.982"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="51309" i_stop="51189" i_length="121">
            <donor d_prob="0.997" d_score="0.98"/>
            <acceptor a_prob="0.997" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="51188" g_stop="51152" g_length="37"/>
          <reference_exon_boundary r_type="cDNA" r_start="685" r_stop="720" r_length="36" r_score="0.892"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0093P12.2" gen_strand="-" ref_id="SGN-E419693" ref_strand="+">
        <total_alignment_score>0.985</total_alignment_score>
        <cumulative_length_of_scored_exons>721</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0093P12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E419693" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="52574" e_stop="52077"/>
          <exon e_start="51588" e_stop="51460"/>
          <exon e_start="51366" e_stop="51310"/>
          <exon e_start="51188" e_stop="51152"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTTGCTTATCCTTCCGGTAGTCTCTGATCGGCGGCAGCATTTGTGATCCAGAGACCTAAAAGGACGGTGAAGAATTCGAGCTGGAGACCCAGGATACTCCGGCGCCGGGAAACGGCAAGATCCGATACCGATCACCTTCAGCAGCCGAGCTTTTAGAGGCACAGCTCGATCCACTTCAAATGGAGAAGACAATGAAGCGAAACAACAGACAGTATGGTGGTGAGTCATTCACCGATAAGATCCAGAGGTATAAAGGTGTGATCCTTGTGATTTGCGTTCCGTTGTTTCTCGTTTCTCTAGTGCTTTATGTAATGCCGACGCGTTATCCGTCTGATTCGATGGAGTCGTTAAACCGGAAATTCTCTCCGAATCTCGGATCTATGAAATATGCGGTTATATTTGATGCTGGAAGTTCGGGTAGTAGAGTTCATGTCTTCTGTTTTGATGAGAATTTGGATCTTGTTCCCATTGGCAATGAACTCGAACTTTTCGTGCAGGTAATATTCTATTTTGCATTTATTTAATCGTTATTGTGGATTCATATATTGTCAATCCCAGTATGATCTAGTTTGGAAGCAGTGAGTCAGTTGAACATTTTTCGCCAGAGAGTTGAGAAAATTACAGTGTATATATGCCCTGTTAGTATTATCAAAGTTTATGATGCAAGCAAGGAACTTTGAGCTATAGCTTGGTATTTGACTAGCTTATAGCTGATTTATATTATTGATCCTGACAGAATCAAGTTTGAACGCAGCAAGTTCGACCAAACTTAAACACAAAACTCAAGCACCTCTATCACTGATTATGTTTCTGATTGAAATGTAGTTGATATTGATTGAAATGCATCTCCAGTGAAGTCTGAAAATCTTTGCAAACAGCCTATGTGTTCCCCCTCTTTCTAGTTTGTTATATATGAATCCCTAGATTTTGTGGAAAAGCTTTCTATTAGCAGCAGATGTTCATCTATATTTGGCTTTTGTACCAGAAAAAACCAGGTCTGAGTTCATTTGCTAGTGATCCTGTGGCTGCTGCCGATTCTCTTCTACCACTTCTAAAGGACGCAGAGAATGTAGTTCCACGCAATTTGCGCAGTAATACACCAGTGAGAGTTGGGGTTAGTGAACATTGTATAAAGAAATTTCGTATAATTGAAGTTTAAACTTTTTAGCCTGCCCATAGGCTCAATACTGATAGGCAGTTTATCTAGGCCACTGCAGGTTTGAGGCAGTTGGAAGGTGATGCATCTGACAGGATTCTTCAAGCGGTAAGATTGTTTTACATCCTAGACCTTCATCTGTTTGGGCATGTCTTGTGTTACAATTTTGAAGTGGCTGTTTCTACTTAAGTTTTTCAGTACTTAGAACAAATATAAATGTGTTTTGAAGGTGAGGGATTTCCTGAAGAGCAAAAGCAGCTTCAAAG</genome_strand>
        <mrna_strand>ATTTGCTTATCCTTCCGGTAGTCTCTGATCGGCGGCAGCATTTGTGATCCAGAGACCTAAAAGGACGGTGAAGAATTCGAGCTGGAGACCCAGGAGACTCCGGCGCCGGGAAACGGCAAGATCCGATATCGATCACCTTCGGCAGCCGAGCTTTTAGAGGCACAGCTCGATCCACTTCAAATGGAGAAGACAATGAAGCGAAACAACAGACAGTATGGTGGTGAGTCATTCTCCGATAAGATCCAGAGGTATAAAGGTGTGATCCTTGTGATTTGCGTTCCGTTGTTTCTCGTTTCTCTAGTGCTTTATGTAATGCCGACGCGTTATCCGTCTGATTCGATGGAATCGTTAAATCGGAAATTCTCTCCGAATCTCGGATCTATGAAATATGCGGTTATATTTGATGCTGGAAGTTCGGGTAGTAGAGTTCATGTCTTCTGTTTTGATGAGAATTTGGATCTTGTTCCCATTGGCAATGAACTCGAACTTTTCGTGCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAACCAGGTCTGAGTTCATTTGCTAGTGATCCTATGGCTGCTGCGGATTCTCTTCTACCACTTTTAAAGGACGCAGAGAATGTAGTTCCACGCAATTTGCGCAGTAATACACCAGTGAGAGTTGGG.............................................................................................GCCACTGCAGGTTTGAGGCAGTTGGAAGGTGACGCATCTGACAGGATTCTTCAAGCG.........................................................................................................................GTGAGGGATTTCCCTGAGAGC-AAAGCAGCTTCAAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-k0pWa0/sgn_ests_tomato_potato" ref_id="SGN-E570147" ref_strand="+" ref_description="SGN-E570147 [14686]">
      <seq>tttttcatttgcttatccttccggtagtctctgatcggcggcagcatttgtgatccagagacctaaaaggacggtgaagaattcgagctggagacccaggagactccggcgccgggaaacggcaagatccgatatcgatcaccttcggcagctgagcttttagaggcacagctcgatccacttcaaatggagaagacaatgaagcgaaacaacagacagtatggtggtgagtcattctccgataagatccagaggtataaaggtgtgatccttgtgatttgcgttccgttgtttctcgtttctctagtgctttatgtaatgccgacgcgttatccgtctgattcgatggaatcgttaaatcggaaattctctccgaatctcggatctatgaaatatgcggttatatttgatgctggaagttcgggtagtagagttcatgtcttctgttttgatgagaatttggatcttgttcccatttggcaatgaactcgaaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0093P12-2lNi1/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0093P12.2" temp_strand="-" temp_description="C12HBa0093P12.2  AC209662.1 htgs_phase:3 submitted_to_sgn_as:C12HBa0093P12 upload_account_name:italy">
        <position start="52880" stop="51789"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="52580" g_stop="52087" g_length="494"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="495" r_length="495" r_score="0.978"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0093P12.2" gen_strand="-" ref_id="SGN-E570147" ref_strand="+">
        <total_alignment_score>0.978</total_alignment_score>
        <cumulative_length_of_scored_exons>494</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0093P12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E570147" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="52580" e_stop="52087"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTTCATTTGCTTATCCTTCCGGTAGTCTCTGATCGGCGGCAGCATTTGTGATCCAGAGACCTAAAAGGACGGTGAAGAATTCGAGCTGGAGACCCAGGATACTCCGGCGCCGGGAAACGGCAAGATCCGATACCGATCACCTTCAGCAGCCGAGCTTTTAGAGGCACAGCTCGATCCACTTCAAATGGAGAAGACAATGAAGCGAAACAACAGACAGTATGGTGGTGAGTCATTCACCGATAAGATCCAGAGGTATAAAGGTGTGATCCTTGTGATTTGCGTTCCGTTGTTTCTCGTTTCTCTAGTGCTTTATGTAATGCCGACGCGTTATCCGTCTGATTCGATGGAGTCGTTAAACCGGAAATTCTCTCCGAATCTCGGATCTATGAAATATGCGGTTATATTTGATGCTGGAAGTTCGGGTAGTAGAGTTCATGTCTTCTGTTTTGATGAGAATTTGGATCTTGTTCCCA-TTGGCAATGAACTCGAACT</genome_strand>
        <mrna_strand>TTTTTCATTTGCTTATCCTTCCGGTAGTCTCTGATCGGCGGCAGCATTTGTGATCCAGAGACCTAAAAGGACGGTGAAGAATTCGAGCTGGAGACCCAGGAGACTCCGGCGCCGGGAAACGGCAAGATCCGATATCGATCACCTTCGGCAGCTGAGCTTTTAGAGGCACAGCTCGATCCACTTCAAATGGAGAAGACAATGAAGCGAAACAACAGACAGTATGGTGGTGAGTCATTCTCCGATAAGATCCAGAGGTATAAAGGTGTGATCCTTGTGATTTGCGTTCCGTTGTTTCTCGTTTCTCTAGTGCTTTATGTAATGCCGACGCGTTATCCGTCTGATTCGATGGAATCGTTAAATCGGAAATTCTCTCCGAATCTCGGATCTATGAAATATGCGGTTATATTTGATGCTGGAAGTTCGGGTAGTAGAGTTCATGTCTTCTGTTTTGATGAGAATTTGGATCTTGTTCCCATTTGGCAATGAACTCGAAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-k0pWa0/sgn_ests_tomato_potato" ref_id="SGN-E444624" ref_strand="+" ref_description="SGN-E444624 [cSTA-43-L1]">
      <seq>atttgcttatccttccggtagtctctgatcggcggcagcatttgtgatccagagacctaaaaggacggtgaagaattcgagctggagacccaggagactccggcgccgggaaacggcaagatccgatatcgatcaccttcggcagccgagcttttagaggcacagctcgatccacttcaaatggagaagacaatgaagcgaaacaacagacagtatggtggtgagtcattctccgataagatccagaggtataaaggtgtgatccttgtgatttgcgttccgttgtttctcgtttctctagtgctttatgtaatgccgacgcgttatccgtctgattcgatggaatcgttaaatcggaaattctctccgaatctcggatctatgaaatatgcggttatatttgatgctggaagttcgggtagtagagttcatgtcttctgttttgatgagaaattggatcttgttcccattggcaatgaactcg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0093P12-2lNi1/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0093P12.2" temp_strand="-" temp_description="C12HBa0093P12.2  AC209662.1 htgs_phase:3 submitted_to_sgn_as:C12HBa0093P12 upload_account_name:italy">
        <position start="52874" stop="51791"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="52574" g_stop="52091" g_length="484"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="484" r_length="484" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0093P12.2" gen_strand="-" ref_id="SGN-E444624" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>484</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0093P12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E444624" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="52574" e_stop="52091"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTTGCTTATCCTTCCGGTAGTCTCTGATCGGCGGCAGCATTTGTGATCCAGAGACCTAAAAGGACGGTGAAGAATTCGAGCTGGAGACCCAGGATACTCCGGCGCCGGGAAACGGCAAGATCCGATACCGATCACCTTCAGCAGCCGAGCTTTTAGAGGCACAGCTCGATCCACTTCAAATGGAGAAGACAATGAAGCGAAACAACAGACAGTATGGTGGTGAGTCATTCACCGATAAGATCCAGAGGTATAAAGGTGTGATCCTTGTGATTTGCGTTCCGTTGTTTCTCGTTTCTCTAGTGCTTTATGTAATGCCGACGCGTTATCCGTCTGATTCGATGGAGTCGTTAAACCGGAAATTCTCTCCGAATCTCGGATCTATGAAATATGCGGTTATATTTGATGCTGGAAGTTCGGGTAGTAGAGTTCATGTCTTCTGTTTTGATGAGAATTTGGATCTTGTTCCCATTGGCAATGAACTCG</genome_strand>
        <mrna_strand>ATTTGCTTATCCTTCCGGTAGTCTCTGATCGGCGGCAGCATTTGTGATCCAGAGACCTAAAAGGACGGTGAAGAATTCGAGCTGGAGACCCAGGAGACTCCGGCGCCGGGAAACGGCAAGATCCGATATCGATCACCTTCGGCAGCCGAGCTTTTAGAGGCACAGCTCGATCCACTTCAAATGGAGAAGACAATGAAGCGAAACAACAGACAGTATGGTGGTGAGTCATTCTCCGATAAGATCCAGAGGTATAAAGGTGTGATCCTTGTGATTTGCGTTCCGTTGTTTCTCGTTTCTCTAGTGCTTTATGTAATGCCGACGCGTTATCCGTCTGATTCGATGGAATCGTTAAATCGGAAATTCTCTCCGAATCTCGGATCTATGAAATATGCGGTTATATTTGATGCTGGAAGTTCGGGTAGTAGAGTTCATGTCTTCTGTTTTGATGAGAAATTGGATCTTGTTCCCATTGGCAATGAACTCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-k0pWa0/sgn_ests_tomato_potato" ref_id="SGN-E739073" ref_strand="+" ref_description="SGN-E739073 [LC16AB04]">
      <seq>ctctaatgcatccaactcctttttcctcccaaaaatcactcacaataatggctttacaacaaccatttctatctgaattactactccactcatcttcaattagaacaacactccccaaaagttcacttttttctctacaaatacctcaaagattcaatctttatcttcaaaataagcaaatcaagaaacaaggaacaagttgttatgcaattgctgagaatcttgaagctgaggatcaaagtttgattttggaaaattcaagtttagatgagttgaggggacaaagggaaattgttggttatgattggactgaagaatggtatcctttgtatttaaccaagaatgtacctaatgatgcacctttaggtcttactgtctttgataaacaagttgttttgtataaagatggaagtggtgaacttagatgctttgaagatagatgtccacataggtaaaaagaacatactatatatgtttgtgttttcattgtctcagttcagtgtacaaagcatctcgatataaatagtactaattaaacgtataggtcacacagagataactttgtttgttcaagaacttagtattttagcatgatcttgttatgcatagacatttcttttttacttgttccttatgtagttaagtgatagctaatacattatgtagttgcttaatttctcttgattagctaaaatctatgtttcgtgtaagggacaagtacaagaagggaagtaggaagaatcgatttgtagcaactacgatttgagttactagtcgttggaaagtctcacaagacggatgagctccgttttttttcatcatactatggtggaaaaacatctgttttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0093P12-2lNi1/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0093P12.2" temp_strand="+" temp_description="C12HBa0093P12.2  AC209662.1 htgs_phase:3 submitted_to_sgn_as:C12HBa0093P12 upload_account_name:italy">
        <position start="54300" stop="55747"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="54600" g_stop="55447" g_length="848"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="848" r_length="848" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0093P12.2" gen_strand="+" ref_id="SGN-E739073" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>848</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0093P12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E739073" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="54600" e_stop="55447"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCTAATGCATCCAACTCCTTTTTCCTCCCAAAAATCACTCACAATAATGGCTTTACAACAACCATTTCTATCTGAATTACTACTCCACTCATCTTCAATTAGAACAACACTCCCCAAAAGTTCACTTTTTTCTCTACAAATACCTCAAAGATTCAATCTTTATCTTCAAAATAAGCAAATCAAGAAACAAGGAACAAGTTGTTATGCAATTGCTGAGAATCTTGAAGCTGAGGATCAAAGTTTGATTTTGGAAAATTCAAGTTTAGATGAGTTGAGGGGACAAAGGGAAATTGTTGGTTATGATTGGACTGAAGAATGGTATCCTTTGTATTTAACCAAGAATGTACCTAATGATGCACCTTTAGGTCTTACTGTCTTTGATAAACAAGTTGTTTTGTATAAAGATGGAAGTGGTGAACTTAGATGCTTTGAAGATAGATGTCCACATAGGTAAAAAGAACATACTATATATGTTTGTGTTTTCATTGTCTCAGTTCAGTGTACAAAGCATCTCGATATAAATAGTACTAATTAAACGTATAGGTCACACAGAGATAACTTTGTTTGTTCAAGAACTTAGTATTTTAGCATGATCTTGTTATGCATAGACATTTCTTTTTTACTTGTTCCTTATGTAGTTAAGTGATAGCTAATACATTATGTAGTTGCTTAATTTCTCTTGATTAGCTAAAATCTATGTTTCGTGTAAGGGACAAGTACAAGAAGGGAAGTAGGAAGAATCGATTTGTAGCAACTACGATTTGAGTTACTAGTCGTTGGAAAGTCTCACAAGACGGATGAGCTCCGTTTTTTTTCATCATACTATGGTGGAAAAACATCTGTTTTT</genome_strand>
        <mrna_strand>CTCTAATGCATCCAACTCCTTTTTCCTCCCAAAAATCACTCACAATAATGGCTTTACAACAACCATTTCTATCTGAATTACTACTCCACTCATCTTCAATTAGAACAACACTCCCCAAAAGTTCACTTTTTTCTCTACAAATACCTCAAAGATTCAATCTTTATCTTCAAAATAAGCAAATCAAGAAACAAGGAACAAGTTGTTATGCAATTGCTGAGAATCTTGAAGCTGAGGATCAAAGTTTGATTTTGGAAAATTCAAGTTTAGATGAGTTGAGGGGACAAAGGGAAATTGTTGGTTATGATTGGACTGAAGAATGGTATCCTTTGTATTTAACCAAGAATGTACCTAATGATGCACCTTTAGGTCTTACTGTCTTTGATAAACAAGTTGTTTTGTATAAAGATGGAAGTGGTGAACTTAGATGCTTTGAAGATAGATGTCCACATAGGTAAAAAGAACATACTATATATGTTTGTGTTTTCATTGTCTCAGTTCAGTGTACAAAGCATCTCGATATAAATAGTACTAATTAAACGTATAGGTCACACAGAGATAACTTTGTTTGTTCAAGAACTTAGTATTTTAGCATGATCTTGTTATGCATAGACATTTCTTTTTTACTTGTTCCTTATGTAGTTAAGTGATAGCTAATACATTATGTAGTTGCTTAATTTCTCTTGATTAGCTAAAATCTATGTTTCGTGTAAGGGACAAGTACAAGAAGGGAAGTAGGAAGAATCGATTTGTAGCAACTACGATTTGAGTTACTAGTCGTTGGAAAGTCTCACAAGACGGATGAGCTCCGTTTTTTTTCATCATACTATGGTGGAAAAACATCTGTTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-k0pWa0/sgn_ests_tomato_potato" ref_id="SGN-E736673" ref_strand="+" ref_description="SGN-E736673 [LC06CG10]">
      <seq>ctctaatgcatccaactcctttttcctcccaaaaatcactcacaataatggctttacaacaaccatttctatctgaattactactccactcatcttcaattagaacaacactccccaaaagttcacttttttctctacaaatacctcaaagattcaatctttatcttcaaaataagcaaatcaagaaacaaggaacaagttgttatgcaattgctgagaatcttgaagctgaggatcaaagtttgattttggaaaattcaagtttagatgagttgaggggacaaagggaaattgttggttatgattggactgaagaatggtatcctttgtatttaaccaagaatgtacctaatgatgcacctttaggtcttactgtctttgataaacaagttgttttgtataaagatggaagtggtgaacttagatgctttgaagatagatgtccacataggtaaaaagaacatactatatatgtttgtgttttcattgtctcagttcagtgtacaaagcatctcgatataaatagtactaattaaacgtataggtcacacagagataactttgtttgttcaagaacttagtattttagcatgatcttgttatgcatagacatttcttttttacttgttccttatgtagttaagtgatagctaatacattatgtagttgcttaatttctcttgattagctaaaatctatgtttcgtgtaagggacaagtacaagaagggaagtaagaagaatcgatttgtagcaactacgatttgagttactagtcgttggaaagtctcacaagacggatgagctccgttttttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0093P12-2lNi1/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0093P12.2" temp_strand="+" temp_description="C12HBa0093P12.2  AC209662.1 htgs_phase:3 submitted_to_sgn_as:C12HBa0093P12 upload_account_name:italy">
        <position start="54300" stop="55714"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="54600" g_stop="55414" g_length="815"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="815" r_length="815" r_score="0.999"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0093P12.2" gen_strand="+" ref_id="SGN-E736673" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>815</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0093P12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E736673" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="54600" e_stop="55414"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCTAATGCATCCAACTCCTTTTTCCTCCCAAAAATCACTCACAATAATGGCTTTACAACAACCATTTCTATCTGAATTACTACTCCACTCATCTTCAATTAGAACAACACTCCCCAAAAGTTCACTTTTTTCTCTACAAATACCTCAAAGATTCAATCTTTATCTTCAAAATAAGCAAATCAAGAAACAAGGAACAAGTTGTTATGCAATTGCTGAGAATCTTGAAGCTGAGGATCAAAGTTTGATTTTGGAAAATTCAAGTTTAGATGAGTTGAGGGGACAAAGGGAAATTGTTGGTTATGATTGGACTGAAGAATGGTATCCTTTGTATTTAACCAAGAATGTACCTAATGATGCACCTTTAGGTCTTACTGTCTTTGATAAACAAGTTGTTTTGTATAAAGATGGAAGTGGTGAACTTAGATGCTTTGAAGATAGATGTCCACATAGGTAAAAAGAACATACTATATATGTTTGTGTTTTCATTGTCTCAGTTCAGTGTACAAAGCATCTCGATATAAATAGTACTAATTAAACGTATAGGTCACACAGAGATAACTTTGTTTGTTCAAGAACTTAGTATTTTAGCATGATCTTGTTATGCATAGACATTTCTTTTTTACTTGTTCCTTATGTAGTTAAGTGATAGCTAATACATTATGTAGTTGCTTAATTTCTCTTGATTAGCTAAAATCTATGTTTCGTGTAAGGGACAAGTACAAGAAGGGAAGTAGGAAGAATCGATTTGTAGCAACTACGATTTGAGTTACTAGTCGTTGGAAAGTCTCACAAGACGGATGAGCTCCGTTTTTTT</genome_strand>
        <mrna_strand>CTCTAATGCATCCAACTCCTTTTTCCTCCCAAAAATCACTCACAATAATGGCTTTACAACAACCATTTCTATCTGAATTACTACTCCACTCATCTTCAATTAGAACAACACTCCCCAAAAGTTCACTTTTTTCTCTACAAATACCTCAAAGATTCAATCTTTATCTTCAAAATAAGCAAATCAAGAAACAAGGAACAAGTTGTTATGCAATTGCTGAGAATCTTGAAGCTGAGGATCAAAGTTTGATTTTGGAAAATTCAAGTTTAGATGAGTTGAGGGGACAAAGGGAAATTGTTGGTTATGATTGGACTGAAGAATGGTATCCTTTGTATTTAACCAAGAATGTACCTAATGATGCACCTTTAGGTCTTACTGTCTTTGATAAACAAGTTGTTTTGTATAAAGATGGAAGTGGTGAACTTAGATGCTTTGAAGATAGATGTCCACATAGGTAAAAAGAACATACTATATATGTTTGTGTTTTCATTGTCTCAGTTCAGTGTACAAAGCATCTCGATATAAATAGTACTAATTAAACGTATAGGTCACACAGAGATAACTTTGTTTGTTCAAGAACTTAGTATTTTAGCATGATCTTGTTATGCATAGACATTTCTTTTTTACTTGTTCCTTATGTAGTTAAGTGATAGCTAATACATTATGTAGTTGCTTAATTTCTCTTGATTAGCTAAAATCTATGTTTCGTGTAAGGGACAAGTACAAGAAGGGAAGTAAGAAGAATCGATTTGTAGCAACTACGATTTGAGTTACTAGTCGTTGGAAAGTCTCACAAGACGGATGAGCTCCGTTTTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-k0pWa0/sgn_ests_tomato_potato" ref_id="SGN-E343651" ref_strand="+" ref_description="SGN-E343651 [cTOF-20-J12]">
      <seq>atggctttacaacaaccatttctatctgaattactactccactcatcttcaattagaacaacactccccaaaagttcacttttttctctacaaatacctcaaagattcaatctttatcttcaaaataagcaaatcaagaaacaaggaacaagttgttatgcaattgctgagaatcttgaagctgaggatcaaagtttgattttggaaaattcaagtttagatgagttgaggggacaaagggaaattgttggttatgattggactgaagaatggtatcctttgtatttaaccaagaatgtacctaatgatgcacctttaggtcttactgtctttgataaacaagttgttttgtataaagatggaagtggtgaacttagatgctttgaagatagatgtccacataggtaaaaagaacatactatatatgtttgtgttttcattgtctcagttcagtgtacaaagcatctcgatataaatagtactaattaaacgtataggtcacacagagataactttgtttgttcaagaacttagtattttagcatgatcttgttatgcatagacatttcttttttacttgttccttatgtagttaagtgatagctaatacattatgtagttgcttaatttctcttgattagctaaaatctatgtttcgtgtaagggacaagtacaagaagggaagtaggaagaatcgatttgtagcaactacgaattgagttactagtcgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0093P12-2lNi1/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0093P12.2" temp_strand="+" temp_description="C12HBa0093P12.2  AC209662.1 htgs_phase:3 submitted_to_sgn_as:C12HBa0093P12 upload_account_name:italy">
        <position start="54347" stop="55677"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="54647" g_stop="55377" g_length="731"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="731" r_length="731" r_score="0.999"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0093P12.2" gen_strand="+" ref_id="SGN-E343651" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>731</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0093P12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E343651" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="54647" e_stop="55377"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGGCTTTACAACAACCATTTCTATCTGAATTACTACTCCACTCATCTTCAATTAGAACAACACTCCCCAAAAGTTCACTTTTTTCTCTACAAATACCTCAAAGATTCAATCTTTATCTTCAAAATAAGCAAATCAAGAAACAAGGAACAAGTTGTTATGCAATTGCTGAGAATCTTGAAGCTGAGGATCAAAGTTTGATTTTGGAAAATTCAAGTTTAGATGAGTTGAGGGGACAAAGGGAAATTGTTGGTTATGATTGGACTGAAGAATGGTATCCTTTGTATTTAACCAAGAATGTACCTAATGATGCACCTTTAGGTCTTACTGTCTTTGATAAACAAGTTGTTTTGTATAAAGATGGAAGTGGTGAACTTAGATGCTTTGAAGATAGATGTCCACATAGGTAAAAAGAACATACTATATATGTTTGTGTTTTCATTGTCTCAGTTCAGTGTACAAAGCATCTCGATATAAATAGTACTAATTAAACGTATAGGTCACACAGAGATAACTTTGTTTGTTCAAGAACTTAGTATTTTAGCATGATCTTGTTATGCATAGACATTTCTTTTTTACTTGTTCCTTATGTAGTTAAGTGATAGCTAATACATTATGTAGTTGCTTAATTTCTCTTGATTAGCTAAAATCTATGTTTCGTGTAAGGGACAAGTACAAGAAGGGAAGTAGGAAGAATCGATTTGTAGCAACTACGATTTGAGTTACTAGTCGT</genome_strand>
        <mrna_strand>ATGGCTTTACAACAACCATTTCTATCTGAATTACTACTCCACTCATCTTCAATTAGAACAACACTCCCCAAAAGTTCACTTTTTTCTCTACAAATACCTCAAAGATTCAATCTTTATCTTCAAAATAAGCAAATCAAGAAACAAGGAACAAGTTGTTATGCAATTGCTGAGAATCTTGAAGCTGAGGATCAAAGTTTGATTTTGGAAAATTCAAGTTTAGATGAGTTGAGGGGACAAAGGGAAATTGTTGGTTATGATTGGACTGAAGAATGGTATCCTTTGTATTTAACCAAGAATGTACCTAATGATGCACCTTTAGGTCTTACTGTCTTTGATAAACAAGTTGTTTTGTATAAAGATGGAAGTGGTGAACTTAGATGCTTTGAAGATAGATGTCCACATAGGTAAAAAGAACATACTATATATGTTTGTGTTTTCATTGTCTCAGTTCAGTGTACAAAGCATCTCGATATAAATAGTACTAATTAAACGTATAGGTCACACAGAGATAACTTTGTTTGTTCAAGAACTTAGTATTTTAGCATGATCTTGTTATGCATAGACATTTCTTTTTTACTTGTTCCTTATGTAGTTAAGTGATAGCTAATACATTATGTAGTTGCTTAATTTCTCTTGATTAGCTAAAATCTATGTTTCGTGTAAGGGACAAGTACAAGAAGGGAAGTAGGAAGAATCGATTTGTAGCAACTACGAATTGAGTTACTAGTCGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>72</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="-" PGL_start="2427" PGL_stop="1"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="2427" e_stop="2038"/>
            <exon e_start="445" e_stop="293"/>
            <exon e_start="145" e_stop="1"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.984" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.991" e_score="1.000"/>
          <exon-only e_score="0.945"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="2427" e_stop="2038" e_length="390"/>
          </exon>
          <intron i_serial="1" don_prob="0.984" acc_prob="0.997">
            <gDNA_intron_boundary i_start="2037" i_stop="446" i_length="1592"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="445" e_stop="293" e_length="153"/>
          </exon>
          <intron i_serial="2" don_prob="0.997" acc_prob="0.991">
            <gDNA_intron_boundary i_start="292" i_stop="146" i_length="147"/>
          </intron>
          <exon e_serial="3" e_score="0.945">
            <gDNA_exon_boundary e_start="145" e_stop="1" e_length="145"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2427" stop="2038"/>
              <exon start="445" stop="293"/>
              <exon start="145" stop="1"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E559877" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2422" stop="2038"/>
              <exon start="445" stop="293"/>
              <exon start="145" stop="65"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E395668" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2422" stop="2038"/>
              <exon start="445" stop="316"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E307480" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2421" stop="2038"/>
              <exon start="445" stop="293"/>
              <exon start="145" stop="66"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E318076" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2421" stop="2038"/>
              <exon start="445" stop="293"/>
              <exon start="145" stop="117"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E210308" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2420" stop="2038"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E582102" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2419" stop="2038"/>
              <exon start="445" stop="426"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E303502" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2418" stop="2038"/>
              <exon start="445" stop="293"/>
              <exon start="145" stop="50"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E622402" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2417" stop="2038"/>
              <exon start="445" stop="293"/>
              <exon start="145" stop="71"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E306854" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2414" stop="2048"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E331254" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2409" stop="2038"/>
              <exon start="445" stop="299"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E287725" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2372" stop="2129"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E307348" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2292" stop="2038"/>
              <exon start="445" stop="301"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E250375" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2248" stop="2038"/>
              <exon start="445" stop="293"/>
              <exon start="145" stop="89"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E321151" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CCTCAAAAAGATCAAAAAAGTTAGAACTCAAAGAACAAGTAACATTGATTTCTACACAATAATTTGTCTCTTTTTGTCTATTTGATCATCGCTGAGGACTCACCGATCCATTAATTTCGTATTTTCATATTGTTTTTTTCAGCTTATAAGGAGATCAATTACGAATAATCTAAAGGGTCTTTGCATATAGAGATGCAAAAGACCTCATTTTTGTTGTAAATTTTTTATTTTTTTGTTGTGGGGTTGTTCAATTTCGTATTTTTTTTTTGTGGGTTTTGAATTTGGGAGATGGGAAATATATTTGTGAAGAAACCGAAGATCACCGAAGTTGATAGAGCGATTTTGTCTTTGAAGACTCAAAGGCGTAAGCTTGCTCAATATCAGCAACAG : CTGGATGCTGTTATTGAAGCCGAAAAACAAGCTGCAAAAGACTTGCTACGCGAAAAGAAGAAAGAGAGGGCCCTTTTAGCATTGAAAAAGAAGAAAGTGCAAGAAGAACTATTAAAGCAAGTTGATGTTTGGCTCATAAATGTTGAGCAGCAA : TTGGCAGATATTGAACTGACAAGCAAGCAAAAGGCTGTCTTTGAGAGTTTGAAAACTGGGAATAATGCAATCAAAGCAATACAAGGTGAGATCAATCTAGAGGATGTTCAAAAGTTAATGGATGATACTGCAGAGGCAAAAGCTT</gDNA_template>
            <first_frame> P  Q  K  D  Q  K  S  *  N  S  K  N  K  *  H  *  F  L  H  N  N  L  S  L  F  V  Y  L  I  I  A  E  D  S  P  I  H  *  F  R  I  F  I  L  F  F  S  A  Y  K  E  I  N  Y  E  *  S  K  G  S  L  H  I  E  M  Q  K  T  S  F  L  L  *  I  F  Y  F  F  V  V  G  L  F  N  F  V  F  F  F  C  G  F  *  I  W  E  M  G  N  I  F  V  K  K  P  K  I  T  E  V  D  R  A  I  L  S  L  K  T  Q  R  R  K  L  A  Q  Y  Q  Q  Q  :  L  D  A  V  I  E  A  E  K  Q  A  A  K  D  L  L  R  E  K  K  K  E  R  A  L  L  A  L  K  K  K  K  V  Q  E  E  L  L  K  Q  V  D  V  W  L  I  N  V  E  Q  Q  :  L  A  D  I  E  L  T  S  K  Q  K  A  V  F  E  S  L  K  T  G  N  N  A  I  K  A  I  Q  G  E  I  N  L  E  D  V  Q  K  L  M  D  D  T  A  E  A  K  A  </first_frame>
            <second_frame>  L  K  K  I  K  K  V  R  T  Q  R  T  S  N  I  D  F  Y  T  I  I  C  L  F  L  S  I  *  S  S  L  R  T  H  R  S  I  N  F  V  F  S  Y  C  F  F  Q  L  I  R  R  S  I  T  N  N  L  K  G  L  C  I  *  R  C  K  R  P  H  F  C  C  K  F  F  I  F  L  L  W  G  C  S  I  S  Y  F  F  F  V  G  F  E  F  G  R  W  E  I  Y  L  *  R  N  R  R  S  P  K  L  I  E  R  F  C  L  *  R  L  K  G  V  S  L  L  N  I  S  N  S :   W  M  L  L  L  K  P  K  N  K  L  Q  K  T  C  Y  A  K  R  R  K  R  G  P  F  *  H  *  K  R  R  K  C  K  K  N  Y  *  S  K  L  M  F  G  S  *  M  L  S  S  N :   W  Q  I  L  N  *  Q  A  S  K  R  L  S  L  R  V  *  K  L  G  I  M  Q  S  K  Q  Y  K  V  R  S  I  *  R  M  F  K  S  *  W  M  I  L  Q  R  Q  K  L </second_frame>
            <third_frame>   S  K  R  S  K  K  L  E  L  K  E  Q  V  T  L  I  S  T  Q  *  F  V  S  F  C  L  F  D  H  R  *  G  L  T  D  P  L  I  S  Y  F  H  I  V  F  F  S  L  *  G  D  Q  L  R  I  I  *  R  V  F  A  Y  R  D  A  K  D  L  I  F  V  V  N  F  L  F  F  C  C  G  V  V  Q  F  R  I  F  F  L  W  V  L  N  L  G  D  G  K  Y  I  C  E  E  T  E  D  H  R  S  *  *  S  D  F  V  F  E  D  S  K  A  *  A  C  S  I  S  A  T   : A  G  C  C  Y  *  S  R  K  T  S  C  K  R  L  A  T  R  K  E  E  R  E  G  P  F  S  I  E  K  E  E  S  A  R  R  T  I  K  A  S  *  C  L  A  H  K  C  *  A  A   : I  G  R  Y  *  T  D  K  Q  A  K  G  C  L  *  E  F  E  N  W  E  *  C  N  Q  S  N  T  R  *  D  Q  S  R  G  C  S  K  V  N  G  *  Y  C  R  G  K  S   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0093P12.2" strand="-"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="2148" stop="2038"/>
                    <exon start="445" stop="293"/>
                    <exon start="145" stop="2"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>408</number_coding_nucleotides>
                  <number_encoded_amino_acids>136</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IWEMGNIFVKKPKITEVDRAILSLKTQRRKLAQYQQQLDAVIEAEKQAAKDLLREKKKERALLALKKKKVQEELLKQVDVWLINVEQQLADIELTSKQKAVFESLKTGNNAIKAIQGEINLEDVQKLMDDTAEAKA</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="-" PGL_start="11490" PGL_stop="8658"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="11490" e_stop="11398"/>
            <exon e_start="11053" e_stop="10938"/>
            <exon e_start="10694" e_stop="10635"/>
            <exon e_start="10433" e_stop="10248"/>
            <exon e_start="10161" e_stop="10057"/>
            <exon e_start="9979" e_stop="9883"/>
            <exon e_start="9455" e_stop="9348"/>
            <exon e_start="9253" e_stop="9118"/>
            <exon e_start="9026" e_stop="8658"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.963" e_score="1.000"/>
          <exon-intron don_prob="0.922" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.910" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.684" e_score="1.000"/>
          <exon-intron don_prob="0.962" acc_prob="0.666" e_score="1.000"/>
          <exon-intron don_prob="0.481" acc_prob="0.982" e_score="1.000"/>
          <exon-intron don_prob="0.984" acc_prob="0.917" e_score="1.000"/>
          <exon-only e_score="0.994"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="11490" e_stop="11398" e_length="93"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.963">
            <gDNA_intron_boundary i_start="11397" i_stop="11054" i_length="344"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="11053" e_stop="10938" e_length="116"/>
          </exon>
          <intron i_serial="2" don_prob="0.922" acc_prob="0.997">
            <gDNA_intron_boundary i_start="10937" i_stop="10695" i_length="243"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="10694" e_stop="10635" e_length="60"/>
          </exon>
          <intron i_serial="3" don_prob="0.996" acc_prob="0.000">
            <gDNA_intron_boundary i_start="10634" i_stop="10434" i_length="201"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="10433" e_stop="10248" e_length="186"/>
          </exon>
          <intron i_serial="4" don_prob="0.910" acc_prob="0.994">
            <gDNA_intron_boundary i_start="10247" i_stop="10162" i_length="86"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="10161" e_stop="10057" e_length="105"/>
          </exon>
          <intron i_serial="5" don_prob="1.000" acc_prob="0.684">
            <gDNA_intron_boundary i_start="10056" i_stop="9980" i_length="77"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="9979" e_stop="9883" e_length="97"/>
          </exon>
          <intron i_serial="6" don_prob="0.962" acc_prob="0.666">
            <gDNA_intron_boundary i_start="9882" i_stop="9456" i_length="427"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="9455" e_stop="9348" e_length="108"/>
          </exon>
          <intron i_serial="7" don_prob="0.481" acc_prob="0.982">
            <gDNA_intron_boundary i_start="9347" i_stop="9254" i_length="94"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="9253" e_stop="9118" e_length="136"/>
          </exon>
          <intron i_serial="8" don_prob="0.984" acc_prob="0.917">
            <gDNA_intron_boundary i_start="9117" i_stop="9027" i_length="91"/>
          </intron>
          <exon e_serial="9" e_score="0.994">
            <gDNA_exon_boundary e_start="9026" e_stop="8658" e_length="369"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11490" stop="11398"/>
              <exon start="11053" stop="10938"/>
              <exon start="10694" stop="10635"/>
              <exon start="10433" stop="10248"/>
              <exon start="10161" stop="10057"/>
              <exon start="9979" stop="9883"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E545755" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11490" stop="11398"/>
              <exon start="11053" stop="10938"/>
              <exon start="10694" stop="10635"/>
              <exon start="10433" stop="10248"/>
              <exon start="10161" stop="10074"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E545762" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11489" stop="11398"/>
              <exon start="11053" stop="10938"/>
              <exon start="10694" stop="10635"/>
              <exon start="10433" stop="10262"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E312682" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="10141" stop="10057"/>
              <exon start="9979" stop="9883"/>
              <exon start="9455" stop="9348"/>
              <exon start="9253" stop="9118"/>
              <exon start="9026" stop="8658"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E545754" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="9357" stop="9348"/>
              <exon start="9253" stop="9118"/>
              <exon start="9026" stop="8678"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E545761" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CTATAATGAATCCCTTTTTTTAATTCATTTGCATAATCAATAAAATGGTAGAAGAAATCAAGAAAATCATCATTGATACTGACCCTGGAATTG : ATGATGCAATCGCGATTTTCGTGGCACTTCAATCTCCTGAAATTGAAGTAATTGGACTCACAACAATATTTGGTAATGTTCAGACAACTCTGTCAACCAGAAATGCTTTACATCTG : TTGGAGATAGCTGGGAGGACAGATATTCCAGTGGCTGAAGGCTCACACGTTACGATCACT : GAAGGCGTAAAACTTCAAAGTAGTGGATATGTTCATGGCGCGGATGGACTCGGAAACCAAAACATTTCTCCACCCAAAGGAAAGGCTATTGAACAGACTGCAGCTGAATTTCTCATTCAGCAAACTAGTCTTTACCCTGGAAAGGTCACTGTTGTGGCCTTAGGCCCCCTGACAAATATAGCACTT : GCTATTCAGTTGGATCCTGAATTTTTCAAAAACGTTGGTCAAGTTGTTGTTCTTGGTGGTGCTTTTGCTGTAAATGGAAATGTGAGTCCAGCAGCTGAGGCAAAT : ATCTTCAAAGATCCAACTGCTGCTGATATTGTATTTACAAGTGGTGCTGATGTTCTTGCTGTTGGATTAAATATTACACATCAAGTTGTCCTTACTG : ATTCTCATCGTGGCGAATTGGCAAAGTCCAATGGAAAGTTTGCCAAGTACCTCAGCAAGCTTTTGGATGTCTATTTCGATTATCACAATACTGCATACAGCACGAGAG : GTGTCTTCCTTCATGATCCAACTGCTTTACTTGCTGCTGTTAATCCATCACTCCTCACCTATTCAGAAGGTGTCGTTCGCGTTCAGACAGTTGGCATCACAAAGGGTCTCACAATCTTTTATAACAAACAGAAAAG : GTTTGTTGAAGTCACTGAATGGTCTGAAAAACCTATAGTTAAAGTGGCAGCAACTGTTGATGCTCCTAAAGTTATCGAATTGGTGATGACACGACTCGTCAATTCTTAGAAGTATTCATTGAACATTTATTTGAACAGTGTTACTGTCTTTCTGCACTCAATATTCAGAAACTTAACTACGCTATAAGGAACGGAATCTTAAACTATAGACCAAGTACTACTCTCAGGAACAAGGATGAATGTATGTAAGCAGTAAGCAGCTCATATACAGAATATGAACTTGCAAAAATAAGTTACAGCTAGACTAGTCGTGTTCTGATAGATTTAATCTTTGTGTAAAGATATGACATTTGAGCCTAACTCAACTCT</gDNA_template>
            <first_frame> L  *  *  I  P  F  F  N  S  F  A  *  S  I  K  W  *  K  K  S  R  K  S  S  L  I  L  T  L  E  L  :  M  M  Q  S  R  F  S  W  H  F  N  L  L  K  L  K  *  L  D  S  Q  Q  Y  L  V  M  F  R  Q  L  C  Q  P  E  M  L  Y  I  C :   W  R  *  L  G  G  Q  I  F  Q  W  L  K  A  H  T  L  R  S  L :   K  A  *  N  F  K  V  V  D  M  F  M  A  R  M  D  S  E  T  K  T  F  L  H  P  K  E  R  L  L  N  R  L  Q  L  N  F  S  F  S  K  L  V  F  T  L  E  R  S  L  L  W  P  *  A  P  *  Q  I  *  H  L :   L  F  S  W  I  L  N  F  S  K  T  L  V  K  L  L  F  L  V  V  L  L  L  *  M  E  M  *  V  Q  Q  L  R  Q  I :   S  S  K  I  Q  L  L  L  I  L  Y  L  Q  V  V  L  M  F  L  L  L  D  *  I  L  H  I  K  L  S  L  L  :  I  L  I  V  A  N  W  Q  S  P  M  E  S  L  P  S  T  S  A  S  F  W  M  S  I  S  I  I  T  I  L  H  T  A  R  E  :  V  S  S  F  M  I  Q  L  L  Y  L  L  L  L  I  H  H  S  S  P  I  Q  K  V  S  F  A  F  R  Q  L  A  S  Q  R  V  S  Q  S  F  I  T  N  R  K   : G  L  L  K  S  L  N  G  L  K  N  L  *  L  K  W  Q  Q  L  L  M  L  L  K  L  S  N  W  *  *  H  D  S  S  I  L  R  S  I  H  *  T  F  I  *  T  V  L  L  S  F  C  T  Q  Y  S  E  T  *  L  R  Y  K  E  R  N  L  K  L  *  T  K  Y  Y  S  Q  E  Q  G  *  M  Y  V  S  S  K  Q  L  I  Y  R  I  *  T  C  K  N  K  L  Q  L  D  *  S  C  S  D  R  F  N  L  C  V  K  I  *  H  L  S  L  T  Q  L  </first_frame>
            <second_frame>  Y  N  E  S  L  F  L  I  H  L  H  N  Q  *  N  G  R  R  N  Q  E  N  H  H  *  Y  *  P  W  N  * :   *  C  N  R  D  F  R  G  T  S  I  S  *  N  *  S  N  W  T  H  N  N  I  W  *  C  S  D  N  S  V  N  Q  K  C  F  T  S   : V  G  D  S  W  E  D  R  Y  S  S  G  *  R  L  T  R  Y  D  H   : *  R  R  K  T  S  K  *  W  I  C  S  W  R  G  W  T  R  K  P  K  H  F  S  T  Q  R  K  G  Y  *  T  D  C  S  *  I  S  H  S  A  N  *  S  L  P  W  K  G  H  C  C  G  L  R  P  P  D  K  Y  S  T   : C  Y  S  V  G  S  *  I  F  Q  K  R  W  S  S  C  C  S  W  W  C  F  C  C  K  W  K  C  E  S  S  S  *  G  K   : Y  L  Q  R  S  N  C  C  *  Y  C  I  Y  K  W  C  *  C  S  C  C  W  I  K  Y  Y  T  S  S  C  P  Y  * :   F  S  S  W  R  I  G  K  V  Q  W  K  V  C  Q  V  P  Q  Q  A  F  G  C  L  F  R  L  S  Q  Y  C  I  Q  H  E  R :   C  L  P  S  *  S  N  C  F  T  C  C  C  *  S  I  T  P  H  L  F  R  R  C  R  S  R  S  D  S  W  H  H  K  G  S  H  N  L  L  *  Q  T  E  K  :  V  C  *  S  H  *  M  V  *  K  T  Y  S  *  S  G  S  N  C  *  C  S  *  S  Y  R  I  G  D  D  T  T  R  Q  F  L  E  V  F  I  E  H  L  F  E  Q  C  Y  C  L  S  A  L  N  I  Q  K  L  N  Y  A  I  R  N  G  I  L  N  Y  R  P  S  T  T  L  R  N  K  D  E  C  M  *  A  V  S  S  S  Y  T  E  Y  E  L  A  K  I  S  Y  S  *  T  S  R  V  L  I  D  L  I  F  V  *  R  Y  D  I  *  A  *  L  N  S </second_frame>
            <third_frame>   I  M  N  P  F  F  *  F  I  C  I  I  N  K  M  V  E  E  I  K  K  I  I  I  D  T  D  P  G  I   : D  D  A  I  A  I  F  V  A  L  Q  S  P  E  I  E  V  I  G  L  T  T  I  F  G  N  V  Q  T  T  L  S  T  R  N  A  L  H  L  :  L  E  I  A  G  R  T  D  I  P  V  A  E  G  S  H  V  T  I  T  :  E  G  V  K  L  Q  S  S  G  Y  V  H  G  A  D  G  L  G  N  Q  N  I  S  P  P  K  G  K  A  I  E  Q  T  A  A  E  F  L  I  Q  Q  T  S  L  Y  P  G  K  V  T  V  V  A  L  G  P  L  T  N  I  A  L  :  A  I  Q  L  D  P  E  F  F  K  N  V  G  Q  V  V  V  L  G  G  A  F  A  V  N  G  N  V  S  P  A  A  E  A  N  :  I  F  K  D  P  T  A  A  D  I  V  F  T  S  G  A  D  V  L  A  V  G  L  N  I  T  H  Q  V  V  L  T   : D  S  H  R  G  E  L  A  K  S  N  G  K  F  A  K  Y  L  S  K  L  L  D  V  Y  F  D  Y  H  N  T  A  Y  S  T  R   : G  V  F  L  H  D  P  T  A  L  L  A  A  V  N  P  S  L  L  T  Y  S  E  G  V  V  R  V  Q  T  V  G  I  T  K  G  L  T  I  F  Y  N  K  Q  K  R :   F  V  E  V  T  E  W  S  E  K  P  I  V  K  V  A  A  T  V  D  A  P  K  V  I  E  L  V  M  T  R  L  V  N  S  *  K  Y  S  L  N  I  Y  L  N  S  V  T  V  F  L  H  S  I  F  R  N  L  T  T  L  *  G  T  E  S  *  T  I  D  Q  V  L  L  S  G  T  R  M  N  V  C  K  Q  *  A  A  H  I  Q  N  M  N  L  Q  K  *  V  T  A  R  L  V  V  F  *  *  I  *  S  L  C  K  D  M  T  F  E  P  N  S  T   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0093P12.2" strand="-"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="11467" stop="11398"/>
                    <exon start="11053" stop="10938"/>
                    <exon start="10694" stop="10635"/>
                    <exon start="10433" stop="10248"/>
                    <exon start="10161" stop="10057"/>
                    <exon start="9979" stop="9883"/>
                    <exon start="9455" stop="9348"/>
                    <exon start="9253" stop="9118"/>
                    <exon start="9026" stop="8918"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>984</number_coding_nucleotides>
                  <number_encoded_amino_acids>328</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FICIINKMVEEIKKIIIDTDPGIDDAIAIFVALQSPEIEVIGLTTIFGNVQTTLSTRNALHLLEIAGRTDIPVAEGSHVTITEGVKLQSSGYVHGADGLGNQNISPPKGKAIEQTAAEFLIQQTSLYPGKVTVVALGPLTNIALAIQLDPEFFKNVGQVVVLGGAFAVNGNVSPAAEANIFKDPTAADIVFTSGADVLAVGLNITHQVVLTDSHRGELAKSNGKFAKYLSKLLDVYFDYHNTAYSTRGVFLHDPTALLAAVNPSLLTYSEGVVRVQTVGITKGLTIFYNKQKRFVEVTEWSEKPIVKVAATVDAPKVIELVMTRLVNS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="+" PGL_start="19874" PGL_stop="20617"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="19874" e_stop="20617"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.999"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.999">
            <gDNA_exon_boundary e_start="19874" e_stop="20617" e_length="744"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19874" stop="20513"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E305600" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19874" stop="20508"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E373690" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19891" stop="20617"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E543826" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19891" stop="20419"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E304360" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19892" stop="20395"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E306291" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19916" stop="20503"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E305486" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CAAAAAAAAATCATTCATAATTATGGCTTCTCTTTTTCTATCGAAATTTTCTTTCTTTCTTTTACTAATAATAATAACTTTATTTTTTCACTCTTCTCATTGTGATGTCCTAACAAGATGTCACATCACATCACTTTTTCAGTTCGGCGATTCTATCGCGGATGCTGGAAACGTGATCCGCATACCTGGTGCCGTCATATCGGCCCAGGCATGGGGTCTACCTTATGGTGAAACCTTTTTTCATAAACCTACTGGACGTTTTTCTGACGGTCGTATTATCGCTGACTATATCGCCACGGCTCTCAGTCTCCCATTCCTCAATCCTTACATGGACAAATCAGGTGTTTCCTTTAGTCAAGGTGCTAATTTCGCCGTTGCTGGTGCAACGGCGATGAATAACTCTTTTTTGGAGGAGAGGGGCATTGGACATGTCCCGTTCAACGTTCCTCTCCCGAGTCAATTAGAGTGGTTTAAATCTCACCTCCAGTCAACCTATGGGTCAAAATATTCTACAACTCTACGAAACTCTCTTGTAGTATTAGGAGAGTTTGGTGGAGTTGATTATTGGAATGCTTTAGCGGGAAATAAACCTGAACCTGAGGTACGTACGTACGTACCTTTTATTATTGATGGCATTATAAGTGCCATCAAAGAGGTGATCCAATTAGGATCAACTCGAATTTTGGTTCCAGGAGTTTTTCCTTTTGGGTGTCTATCATCATATCTAACAAGATTCGCTGACAC</gDNA_template>
            <first_frame> Q  K  K  I  I  H  N  Y  G  F  S  F  S  I  E  I  F  F  L  S  F  T  N  N  N  N  F  I  F  S  L  F  S  L  *  C  P  N  K  M  S  H  H  I  T  F  S  V  R  R  F  Y  R  G  C  W  K  R  D  P  H  T  W  C  R  H  I  G  P  G  M  G  S  T  L  W  *  N  L  F  S  *  T  Y  W  T  F  F  *  R  S  Y  Y  R  *  L  Y  R  H  G  S  Q  S  P  I  P  Q  S  L  H  G  Q  I  R  C  F  L  *  S  R  C  *  F  R  R  C  W  C  N  G  D  E  *  L  F  F  G  G  E  G  H  W  T  C  P  V  Q  R  S  S  P  E  S  I  R  V  V  *  I  S  P  P  V  N  L  W  V  K  I  F  Y  N  S  T  K  L  S  C  S  I  R  R  V  W  W  S  *  L  L  E  C  F  S  G  K  *  T  *  T  *  G  T  Y  V  R  T  F  Y  Y  *  W  H  Y  K  C  H  Q  R  G  D  P  I  R  I  N  S  N  F  G  S  R  S  F  S  F  W  V  S  I  I  I  S  N  K  I  R  *  H </first_frame>
            <second_frame>  K  K  K  S  F  I  I  M  A  S  L  F  L  S  K  F  S  F  F  L  L  L  I  I  I  T  L  F  F  H  S  S  H  C  D  V  L  T  R  C  H  I  T  S  L  F  Q  F  G  D  S  I  A  D  A  G  N  V  I  R  I  P  G  A  V  I  S  A  Q  A  W  G  L  P  Y  G  E  T  F  F  H  K  P  T  G  R  F  S  D  G  R  I  I  A  D  Y  I  A  T  A  L  S  L  P  F  L  N  P  Y  M  D  K  S  G  V  S  F  S  Q  G  A  N  F  A  V  A  G  A  T  A  M  N  N  S  F  L  E  E  R  G  I  G  H  V  P  F  N  V  P  L  P  S  Q  L  E  W  F  K  S  H  L  Q  S  T  Y  G  S  K  Y  S  T  T  L  R  N  S  L  V  V  L  G  E  F  G  G  V  D  Y  W  N  A  L  A  G  N  K  P  E  P  E  V  R  T  Y  V  P  F  I  I  D  G  I  I  S  A  I  K  E  V  I  Q  L  G  S  T  R  I  L  V  P  G  V  F  P  F  G  C  L  S  S  Y  L  T  R  F  A  D   </second_frame>
            <third_frame>   K  K  N  H  S  *  L  W  L  L  F  F  Y  R  N  F  L  S  F  F  Y  *  *  *  *  L  Y  F  F  T  L  L  I  V  M  S  *  Q  D  V  T  S  H  H  F  F  S  S  A  I  L  S  R  M  L  E  T  *  S  A  Y  L  V  P  S  Y  R  P  R  H  G  V  Y  L  M  V  K  P  F  F  I  N  L  L  D  V  F  L  T  V  V  L  S  L  T  I  S  P  R  L  S  V  S  H  S  S  I  L  T  W  T  N  Q  V  F  P  L  V  K  V  L  I  S  P  L  L  V  Q  R  R  *  I  T  L  F  W  R  R  G  A  L  D  M  S  R  S  T  F  L  S  R  V  N  *  S  G  L  N  L  T  S  S  Q  P  M  G  Q  N  I  L  Q  L  Y  E  T  L  L  *  Y  *  E  S  L  V  E  L  I  I  G  M  L  *  R  E  I  N  L  N  L  R  Y  V  R  T  Y  L  L  L  L  M  A  L  *  V  P  S  K  R  *  S  N  *  D  Q  L  E  F  W  F  Q  E  F  F  L  L  G  V  Y  H  H  I  *  Q  D  S  L  T  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0093P12.2" strand="+"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="19875" stop="20615"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>741</number_coding_nucleotides>
                  <number_encoded_amino_acids>247</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KKKSFIIMASLFLSKFSFFLLLIIITLFFHSSHCDVLTRCHITSLFQFGDSIADAGNVIRIPGAVISAQAWGLPYGETFFHKPTGRFSDGRIIADYIATALSLPFLNPYMDKSGVSFSQGANFAVAGATAMNNSFLEERGIGHVPFNVPLPSQLEWFKSHLQSTYGSKYSTTLRNSLVVLGEFGGVDYWNALAGNKPEPEVRTYVPFIIDGIISAIKEVIQLGSTRILVPGVFPFGCLSSYLTRFAD</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="-" PGL_start="21185" PGL_stop="20396"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="21185" e_stop="20396"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.997">
            <gDNA_exon_boundary e_start="21185" e_stop="20396" e_length="790"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21185" stop="20396"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E543825" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTACAACACAACAATTATCTTTTCTCATTATTCATATTCATTTCAAACTACAACACATTTCATCAAAATCAACGAACTCAAGTACAAAGAAAATCATGAAAAAGACACCCAAATAACCAAAACAAATTAAACAAAAACCTTAAAAATTCAATAACTAGATAATGCACTCGAATTTCTAAGTCCATAACACCCAAATTTTGGAAGCATATTGTTGATAACAACGTTAGAAATACGATGATACGCTTCATCTGTCAGATGAAGCCCGTCCCAATTAACGTATTGGGACGGGTTAGGACATACATTGGTACTAGCTGAACTACATCCCCCGGCATTGTATCGTCCTCCGCTCCCACAACATGCCGATACCAATGTACTTGGATTAAATCCCAACCAAGACGCGTATCGAAAAACAAGCCTAAAACCACCATAGTAATCCCCATACACAATTTTAACACGTGGGAACTCACATCGTAGATTTTCTAGAGCCTTCTTTAGCTCGATATTATGATACGTAGCGAAATCATTATAAAATTTCAAACAACCATATTGATCATAAGCATTTGGATTCGTGTCAGCGAATCTTGTTAGATATGATGATAGACACCCAAAAGGAAAAACTCCTGGAACCAAAATTCGAGTTGATCCTAATTGGATCACCTCTTTGATGGCACTTATAATGCCATCAATAATAAAAGGTACGTACGTACGTACCTCAGGTTCAGGTTTATTTCCCGCTAAAGCATTCCAATAATCAACTCCACCAAACTCTCCTAATACTACAAGAGAGTTT</gDNA_template>
            <first_frame> L  Q  H  N  N  Y  L  F  S  L  F  I  F  I  S  N  Y  N  T  F  H  Q  N  Q  R  T  Q  V  Q  R  K  S  *  K  R  H  P  N  N  Q  N  K  L  N  K  N  L  K  N  S  I  T  R  *  C  T  R  I  S  K  S  I  T  P  K  F  W  K  H  I  V  D  N  N  V  R  N  T  M  I  R  F  I  C  Q  M  K  P  V  P  I  N  V  L  G  R  V  R  T  Y  I  G  T  S  *  T  T  S  P  G  I  V  S  S  S  A  P  T  T  C  R  Y  Q  C  T  W  I  K  S  Q  P  R  R  V  S  K  N  K  P  K  T  T  I  V  I  P  I  H  N  F  N  T  W  E  L  T  S  *  I  F  *  S  L  L  *  L  D  I  M  I  R  S  E  I  I  I  K  F  Q  T  T  I  L  I  I  S  I  W  I  R  V  S  E  S  C  *  I  *  *  *  T  P  K  R  K  N  S  W  N  Q  N  S  S  *  S  *  L  D  H  L  F  D  G  T  Y  N  A  I  N  N  K  R  Y  V  R  T  Y  L  R  F  R  F  I  S  R  *  S  I  P  I  I  N  S  T  K  L  S  *  Y  Y  K  R  V  </first_frame>
            <second_frame>  Y  N  T  T  I  I  F  S  H  Y  S  Y  S  F  Q  T  T  T  H  F  I  K  I  N  E  L  K  Y  K  E  N  H  E  K  D  T  Q  I  T  K  T  N  *  T  K  T  L  K  I  Q  *  L  D  N  A  L  E  F  L  S  P  *  H  P  N  F  G  S  I  L  L  I  T  T  L  E  I  R  *  Y  A  S  S  V  R  *  S  P  S  Q  L  T  Y  W  D  G  L  G  H  T  L  V  L  A  E  L  H  P  P  A  L  Y  R  P  P  L  P  Q  H  A  D  T  N  V  L  G  L  N  P  N  Q  D  A  Y  R  K  T  S  L  K  P  P  *  *  S  P  Y  T  I  L  T  R  G  N  S  H  R  R  F  S  R  A  F  F  S  S  I  L  *  Y  V  A  K  S  L  *  N  F  K  Q  P  Y  *  S  *  A  F  G  F  V  S  A  N  L  V  R  Y  D  D  R  H  P  K  G  K  T  P  G  T  K  I  R  V  D  P  N  W  I  T  S  L  M  A  L  I  M  P  S  I  I  K  G  T  Y  V  R  T  S  G  S  G  L  F  P  A  K  A  F  Q  *  S  T  P  P  N  S  P  N  T  T  R  E  F </second_frame>
            <third_frame>   T  T  Q  Q  L  S  F  L  I  I  H  I  H  F  K  L  Q  H  I  S  S  K  S  T  N  S  S  T  K  K  I  M  K  K  T  P  K  *  P  K  Q  I  K  Q  K  P  *  K  F  N  N  *  I  M  H  S  N  F  *  V  H  N  T  Q  I  L  E  A  Y  C  *  *  Q  R  *  K  Y  D  D  T  L  H  L  S  D  E  A  R  P  N  *  R  I  G  T  G  *  D  I  H  W  Y  *  L  N  Y  I  P  R  H  C  I  V  L  R  S  H  N  M  P  I  P  M  Y  L  D  *  I  P  T  K  T  R  I  E  K  Q  A  *  N  H  H  S  N  P  H  T  Q  F  *  H  V  G  T  H  I  V  D  F  L  E  P  S  L  A  R  Y  Y  D  T  *  R  N  H  Y  K  I  S  N  N  H  I  D  H  K  H  L  D  S  C  Q  R  I  L  L  D  M  M  I  D  T  Q  K  E  K  L  L  E  P  K  F  E  L  I  L  I  G  S  P  L  *  W  H  L  *  C  H  Q  *  *  K  V  R  T  Y  V  P  Q  V  Q  V  Y  F  P  L  K  H  S  N  N  Q  L  H  Q  T  L  L  I  L  Q  E  S   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0093P12.2" strand="-"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="20629" stop="20435"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>192</number_coding_nucleotides>
                  <number_encoded_amino_acids>64</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>AFGFVSANLVRYDDRHPKGKTPGTKIRVDPNWITSLMALIMPSIIKGTYVRTSGSGLFPAKAFQ*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="+" PGL_start="23255" PGL_stop="23889"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="23255" e_stop="23889"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="23255" e_stop="23889" e_length="635"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23255" stop="23889"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E301519" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTTAATACACATTTTCAATGATGAAAGGGAGATATTTAAACTTTTAATACCGAAAGGGCATGGTCTAGCTATCAATGAAGTGAGTGAATTATGAGTGATCGTGATTCAAATCTCGGCAGAAACAAAAAAAAAACACAATTTCTTCACGTGTGTTGACATTGGTTGATAAAGTTACTTGATACTGTAGTAAGAAGTACTAGGCATCCGATGGAACATCGAGGTATGTGCAAGCTGATGACCCTAAACATATCATTAGTTATCAAAGACTTAAAATTGTAATCCAACCAAATATACCATATGCTTCTTATTGGGGATGTTTAAAAAAAAAAGACGTTCTACCTTCACGAGCTAGGGGTAAAGTGTACGTACACTCTATCCTCTCCTAACCCCACCTATGAGATTACATTGGGTACGTTGTTGTTGCTTCTTAGTGGGACACCTTAGGAATAAATAGCTTTTCTTCCTTTCAAACCTTTCACCCAGTTAAAATACCAATCAATCAATTATACCACAATATTACAATATACAAGTATCTAACTTGACTAGTATACAAGTGTGATAATAACAACTAGAACTTCATATAACCAACAACTCCTCCTATGTGAGGTTCACATGGTTGGTCTCAAGTTCGAATG</gDNA_template>
            <first_frame> F  N  T  H  F  Q  *  *  K  G  D  I  *  T  F  N  T  E  R  A  W  S  S  Y  Q  *  S  E  *  I  M  S  D  R  D  S  N  L  G  R  N  K  K  K  T  Q  F  L  H  V  C  *  H  W  L  I  K  L  L  D  T  V  V  R  S  T  R  H  P  M  E  H  R  G  M  C  K  L  M  T  L  N  I  S  L  V  I  K  D  L  K  L  *  S  N  Q  I  Y  H  M  L  L  I  G  D  V  *  K  K  K  T  F  Y  L  H  E  L  G  V  K  C  T  Y  T  L  S  S  P  N  P  T  Y  E  I  T  L  G  T  L  L  L  L  L  S  G  T  P  *  E  *  I  A  F  L  P  F  K  P  F  T  Q  L  K  Y  Q  S  I  N  Y  T  T  I  L  Q  Y  T  S  I  *  L  D  *  Y  T  S  V  I  I  T  T  R  T  S  Y  N  Q  Q  L  L  L  C  E  V  H  M  V  G  L  K  F  E   </first_frame>
            <second_frame>  L  I  H  I  F  N  D  E  R  E  I  F  K  L  L  I  P  K  G  H  G  L  A  I  N  E  V  S  E  L  *  V  I  V  I  Q  I  S  A  E  T  K  K  K  H  N  F  F  T  C  V  D  I  G  *  *  S  Y  L  I  L  *  *  E  V  L  G  I  R  W  N  I  E  V  C  A  S  *  *  P  *  T  Y  H  *  L  S  K  T  *  N  C  N  P  T  K  Y  T  I  C  F  L  L  G  M  F  K  K  K  R  R  S  T  F  T  S  *  G  *  S  V  R  T  L  Y  P  L  L  T  P  P  M  R  L  H  W  V  R  C  C  C  F  L  V  G  H  L  R  N  K  *  L  F  F  L  S  N  L  S  P  S  *  N  T  N  Q  S  I  I  P  Q  Y  Y  N  I  Q  V  S  N  L  T  S  I  Q  V  *  *  *  Q  L  E  L  H  I  T  N  N  S  S  Y  V  R  F  T  W  L  V  S  S  S  N  </second_frame>
            <third_frame>   *  Y  T  F  S  M  M  K  G  R  Y  L  N  F  *  Y  R  K  G  M  V  *  L  S  M  K  *  V  N  Y  E  *  S  *  F  K  S  R  Q  K  Q  K  K  N  T  I  S  S  R  V  L  T  L  V  D  K  V  T  *  Y  C  S  K  K  Y  *  A  S  D  G  T  S  R  Y  V  Q  A  D  D  P  K  H  I  I  S  Y  Q  R  L  K  I  V  I  Q  P  N  I  P  Y  A  S  Y  W  G  C  L  K  K  K  D  V  L  P  S  R  A  R  G  K  V  Y  V  H  S  I  L  S  *  P  H  L  *  D  Y  I  G  Y  V  V  V  A  S  *  W  D  T  L  G  I  N  S  F  S  S  F  Q  T  F  H  P  V  K  I  P  I  N  Q  L  Y  H  N  I  T  I  Y  K  Y  L  T  *  L  V  Y  K  C  D  N  N  N  *  N  F  I  *  P  T  T  P  P  M  *  G  S  H  G  W  S  Q  V  R  M </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C12HBa0093P12.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="-" PGL_start="25492" PGL_stop="23725"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="25492" e_stop="25402"/>
            <exon e_start="25284" e_stop="25084"/>
            <exon e_start="24413" e_stop="24351"/>
            <exon e_start="24184" e_stop="23725"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.994" acc_prob="0.972" e_score="0.945"/>
          <exon-intron don_prob="0.929" acc_prob="0.929" e_score="0.896"/>
          <exon-intron don_prob="0.999" acc_prob="0.828" e_score="1.000"/>
          <exon-only e_score="0.928"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.945">
            <gDNA_exon_boundary e_start="25492" e_stop="25402" e_length="91"/>
          </exon>
          <intron i_serial="1" don_prob="0.994" acc_prob="0.972">
            <gDNA_intron_boundary i_start="25401" i_stop="25285" i_length="117"/>
          </intron>
          <exon e_serial="2" e_score="0.896">
            <gDNA_exon_boundary e_start="25284" e_stop="25084" e_length="201"/>
          </exon>
          <intron i_serial="2" don_prob="0.929" acc_prob="0.929">
            <gDNA_intron_boundary i_start="25083" i_stop="24414" i_length="670"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="24413" e_stop="24351" e_length="63"/>
          </exon>
          <intron i_serial="3" don_prob="0.999" acc_prob="0.828">
            <gDNA_intron_boundary i_start="24350" i_stop="24185" i_length="166"/>
          </intron>
          <exon e_serial="4" e_score="0.928">
            <gDNA_exon_boundary e_start="24184" e_stop="23725" e_length="460"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25492" stop="25402"/>
              <exon start="25284" stop="25084"/>
              <exon start="24413" stop="24351"/>
              <exon start="24184" stop="23725"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E420940" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GGATCAATGCAAATGTCATCAGTATCAACAGCTCTTCAAAGATGATCAAACTGTTAACTCCACCGGTGGGAGGTCCATTGTTAATCTTCTG : TCACTTGGTCATACTTCAACTTCATCTCAAGCAACCGAGGGAGCATCGGGGAATCATTTAGCCAGAAATCACAAGGGGCACCGTTGTCCACCTTTAGACAGTCAGCAGGAAATTGGTGTTGTGACTGGAAATTGGGGTTGTGGTGCTTTTGGAGGAGATCCTCAACTTAAAGCAATGCTTCAATGGATTGCTGCATCTCAG : GCAATGAGACCTTTCATCTTGTATTATACATTTGGACTGGAAGCATTGCAGATGCTGGAGCAG : GTGATTCAATGGATTGTTTCACATAAGTGGACTGCAGGGGAGCTTTGGAATGTGTTGGTGGAATACTCTTCTCAGAGATTGAGGGAAGAAACTAGAGTAGGCTTCTTCAATTGGCTCCTTCCATCATTGTCTTCTCATGATGACATGCTCAACGATTCCTATGATGATCGGACATGTTCATGCTGTTAAGCTTAATAATGTTGCTCGATCCATGTATACGCCATTCCATTGTACTGTATTATAAGGTAAGATGTGTCGTCATGGTTCTATCTTTATGTTGACTGTCAACCTACTGCATTCGAACTTGAGACCAACCATGTGAACCTCACATAGGAGGAGTTGTTGGTTATATGAAGTTCTAGTTGTTATTATCACACTTGTATACTAGTCAAGTTAGATACTTGTATATTGTAATATTGTGGTATAATTGATTGATTGGTATTTTAACTGGGTGAAAGGT</gDNA_template>
            <first_frame> G  S  M  Q  M  S  S  V  S  T  A  L  Q  R  *  S  N  C  *  L  H  R  W  E  V  H  C  *  S  S   : V  T  W  S  Y  F  N  F  I  S  S  N  R  G  S  I  G  E  S  F  S  Q  K  S  Q  G  A  P  L  S  T  F  R  Q  S  A  G  N  W  C  C  D  W  K  L  G  L  W  C  F  W  R  R  S  S  T  *  S  N  A  S  M  D  C  C  I  S   : G  N  E  T  F  H  L  V  L  Y  I  W  T  G  S  I  A  D  A  G  A   : G  D  S  M  D  C  F  T  *  V  D  C  R  G  A  L  E  C  V  G  G  I  L  F  S  E  I  E  G  R  N  *  S  R  L  L  Q  L  A  P  S  I  I  V  F  S  *  *  H  A  Q  R  F  L  *  *  S  D  M  F  M  L  L  S  L  I  M  L  L  D  P  C  I  R  H  S  I  V  L  Y  Y  K  V  R  C  V  V  M  V  L  S  L  C  *  L  S  T  Y  C  I  R  T  *  D  Q  P  C  E  P  H  I  G  G  V  V  G  Y  M  K  F  *  L  L  L  S  H  L  Y  T  S  Q  V  R  Y  L  Y  I  V  I  L  W  Y  N  *  L  I  G  I  L  T  G  *  K   </first_frame>
            <second_frame>  D  Q  C  K  C  H  Q  Y  Q  Q  L  F  K  D  D  Q  T  V  N  S  T  G  G  R  S  I  V  N  L  L  :  S  L  G  H  T  S  T  S  S  Q  A  T  E  G  A  S  G  N  H  L  A  R  N  H  K  G  H  R  C  P  P  L  D  S  Q  Q  E  I  G  V  V  T  G  N  W  G  C  G  A  F  G  G  D  P  Q  L  K  A  M  L  Q  W  I  A  A  S  Q  :  A  M  R  P  F  I  L  Y  Y  T  F  G  L  E  A  L  Q  M  L  E  Q  :  V  I  Q  W  I  V  S  H  K  W  T  A  G  E  L  W  N  V  L  V  E  Y  S  S  Q  R  L  R  E  E  T  R  V  G  F  F  N  W  L  L  P  S  L  S  S  H  D  D  M  L  N  D  S  Y  D  D  R  T  C  S  C  C  *  A  *  *  C  C  S  I  H  V  Y  A  I  P  L  Y  C  I  I  R  *  D  V  S  S  W  F  Y  L  Y  V  D  C  Q  P  T  A  F  E  L  E  T  N  H  V  N  L  T  *  E  E  L  L  V  I  *  S  S  S  C  Y  Y  H  T  C  I  L  V  K  L  D  T  C  I  L  *  Y  C  G  I  I  D  *  L  V  F  *  L  G  E  R  </second_frame>
            <third_frame>   I  N  A  N  V  I  S  I  N  S  S  S  K  M  I  K  L  L  T  P  P  V  G  G  P  L  L  I  F  C :   H  L  V  I  L  Q  L  H  L  K  Q  P  R  E  H  R  G  I  I  *  P  E  I  T  R  G  T  V  V  H  L  *  T  V  S  R  K  L  V  L  *  L  E  I  G  V  V  V  L  L  E  E  I  L  N  L  K  Q  C  F  N  G  L  L  H  L  R :   Q  *  D  L  S  S  C  I  I  H  L  D  W  K  H  C  R  C  W  S  R :   *  F  N  G  L  F  H  I  S  G  L  Q  G  S  F  G  M  C  W  W  N  T  L  L  R  D  *  G  K  K  L  E  *  A  S  S  I  G  S  F  H  H  C  L  L  M  M  T  C  S  T  I  P  M  M  I  G  H  V  H  A  V  K  L  N  N  V  A  R  S  M  Y  T  P  F  H  C  T  V  L  *  G  K  M  C  R  H  G  S  I  F  M  L  T  V  N  L  L  H  S  N  L  R  P  T  M  *  T  S  H  R  R  S  C  W  L  Y  E  V  L  V  V  I  I  T  L  V  Y  *  S  S  *  I  L  V  Y  C  N  I  V  V  *  L  I  D  W  Y  F  N  W  V  K  G </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0093P12.2" strand="-"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="25491" stop="25402"/>
                    <exon start="25284" stop="25084"/>
                    <exon start="24413" stop="24351"/>
                    <exon start="24184" stop="23996"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>540</number_coding_nucleotides>
                  <number_encoded_amino_acids>180</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DQCKCHQYQQLFKDDQTVNSTGGRSIVNLLSLGHTSTSSQATEGASGNHLARNHKGHRCPPLDSQQEIGVVTGNWGCGAFGGDPQLKAMLQWIAASQAMRPFILYYTFGLEALQMLEQVIQWIVSHKWTAGELWNVLVEYSSQRLREETRVGFFNWLLPSLSSHDDMLNDSYDDRTCSCC*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="-" PGL_start="29943" PGL_stop="27909"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="29943" e_stop="29714"/>
            <exon e_start="29245" e_stop="29057"/>
            <exon e_start="28644" e_stop="28541"/>
            <exon e_start="28203" e_stop="27999"/>
            <exon e_start="27915" e_stop="27909"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.733" acc_prob="0.999" e_score="0.943"/>
          <exon-intron don_prob="0.980" acc_prob="0.924" e_score="0.968"/>
          <exon-intron don_prob="0.981" acc_prob="0.980" e_score="0.962"/>
          <exon-intron don_prob="0.997" acc_prob="0.986" e_score="0.883"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.943">
            <gDNA_exon_boundary e_start="29943" e_stop="29714" e_length="230"/>
          </exon>
          <intron i_serial="1" don_prob="0.733" acc_prob="0.999">
            <gDNA_intron_boundary i_start="29713" i_stop="29246" i_length="468"/>
          </intron>
          <exon e_serial="2" e_score="0.968">
            <gDNA_exon_boundary e_start="29245" e_stop="29057" e_length="189"/>
          </exon>
          <intron i_serial="2" don_prob="0.980" acc_prob="0.924">
            <gDNA_intron_boundary i_start="29056" i_stop="28645" i_length="412"/>
          </intron>
          <exon e_serial="3" e_score="0.962">
            <gDNA_exon_boundary e_start="28644" e_stop="28541" e_length="104"/>
          </exon>
          <intron i_serial="3" don_prob="0.981" acc_prob="0.980">
            <gDNA_intron_boundary i_start="28540" i_stop="28204" i_length="337"/>
          </intron>
          <exon e_serial="4" e_score="0.883">
            <gDNA_exon_boundary e_start="28203" e_stop="27999" e_length="205"/>
          </exon>
          <intron i_serial="4" don_prob="0.997" acc_prob="0.986">
            <gDNA_intron_boundary i_start="27998" i_stop="27916" i_length="83"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="27915" e_stop="27909" e_length="7"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29943" stop="29714"/>
              <exon start="29245" stop="29057"/>
              <exon start="28644" stop="28541"/>
              <exon start="28203" stop="27999"/>
              <exon start="27915" stop="27909"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E482830" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29943" stop="29714"/>
              <exon start="29245" stop="29057"/>
              <exon start="28644" stop="28599"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E426530" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTTAATGGAGAACAGAGAAGACTTGAAGTCAATTCTTCCATTTTTACCCTTTTCACTCCGATCATCTTCACTTTTTTGGCCGGCGCCGGTAACTGAAGCACTTACCGATATCTCGAAAGGTCCTAATCACAGCAAAATTGACTCCGGCGAAGGCCTATTCATCGCCATTTCCGATATTCGAAACTCTCTCTCGTTCCACAGTTTTTCAATTGATACTTCTGCTTCTCAAG : TTGCTTCCTAGGGATGAAGCTGCAAAATGGTTCGAAGAAGTGGTACCACAATTGGCTAAGTTGCTTTTGAGATTGCCTTTATTGCTAGAAACTCATTATGAGAATGCTGATGATGGAGTTTTGAAAGGAGTTAAAACCGGTCTTCGCTTGTTGGAATCACAAGAGCCTGGCATTGTCTTCCTTAGTCAG : GAACTAATTGGTGCTCTTCTTGCATGCGCGTTGTTTTGTCTATTTCCTACCAGTCATAGAGGTGCCAAACACCTTCCAATGATCAACTTTGATCACTTATTTGC : GTGTCTACATGATCATTATGAAGAAGCATTCGATAATAAATTGAAGTGCATTGTTCACTATTTTGGGAGGATATGTTCATCTATGCCAGCAGGCTATGTGTCTTTCGAGCGAAAAGTTCTTTCTTTACAATTTAGTCCATCTTGTATTCCTTATCCAAAGGAAAAATTATGGAGCCAATCCAATATTTCCCTTTGTCATTATGAG : ATTTCTG</gDNA_template>
            <first_frame> F  N  G  E  Q  R  R  L  E  V  N  S  S  I  F  T  L  F  T  P  I  I  F  T  F  L  A  G  A  G  N  *  S  T  Y  R  Y  L  E  R  S  *  S  Q  Q  N  *  L  R  R  R  P  I  H  R  H  F  R  Y  S  K  L  S  L  V  P  Q  F  F  N  *  Y  F  C  F  S  S :   C  F  L  G  M  K  L  Q  N  G  S  K  K  W  Y  H  N  W  L  S  C  F  *  D  C  L  Y  C  *  K  L  I  M  R  M  L  M  M  E  F  *  K  E  L  K  P  V  F  A  C  W  N  H  K  S  L  A  L  S  S  L  V  R :   N  *  L  V  L  F  L  H  A  R  C  F  V  Y  F  L  P  V  I  E  V  P  N  T  F  Q  *  S  T  L  I  T  Y  L   : R  V  Y  M  I  I  M  K  K  H  S  I  I  N  *  S  A  L  F  T  I  L  G  G  Y  V  H  L  C  Q  Q  A  M  C  L  S  S  E  K  F  F  L  Y  N  L  V  H  L  V  F  L  I  Q  R  K  N  Y  G  A  N  P  I  F  P  F  V  I  M  R :   F  L </first_frame>
            <second_frame>  L  M  E  N  R  E  D  L  K  S  I  L  P  F  L  P  F  S  L  R  S  S  S  L  F  W  P  A  P  V  T  E  A  L  T  D  I  S  K  G  P  N  H  S  K  I  D  S  G  E  G  L  F  I  A  I  S  D  I  R  N  S  L  S  F  H  S  F  S  I  D  T  S  A  S  Q   : V  A  S  *  G  *  S  C  K  M  V  R  R  S  G  T  T  I  G  *  V  A  F  E  I  A  F  I  A  R  N  S  L  *  E  C  *  *  W  S  F  E  R  S  *  N  R  S  S  L  V  G  I  T  R  A  W  H  C  L  P  *  S   : G  T  N  W  C  S  S  C  M  R  V  V  L  S  I  S  Y  Q  S  *  R  C  Q  T  P  S  N  D  Q  L  *  S  L  I  C  :  V  S  T  *  S  L  *  R  S  I  R  *  *  I  E  V  H  C  S  L  F  W  E  D  M  F  I  Y  A  S  R  L  C  V  F  R  A  K  S  S  F  F  T  I  *  S  I  L  Y  S  L  S  K  G  K  I  M  E  P  I  Q  Y  F  P  L  S  L  *   : D  F   </second_frame>
            <third_frame>   *  W  R  T  E  K  T  *  S  Q  F  F  H  F  Y  P  F  H  S  D  H  L  H  F  F  G  R  R  R  *  L  K  H  L  P  I  S  R  K  V  L  I  T  A  K  L  T  P  A  K  A  Y  S  S  P  F  P  I  F  E  T  L  S  R  S  T  V  F  Q  L  I  L  L  L  L  K  :  L  L  P  R  D  E  A  A  K  W  F  E  E  V  V  P  Q  L  A  K  L  L  L  R  L  P  L  L  L  E  T  H  Y  E  N  A  D  D  G  V  L  K  G  V  K  T  G  L  R  L  L  E  S  Q  E  P  G  I  V  F  L  S  Q  :  E  L  I  G  A  L  L  A  C  A  L  F  C  L  F  P  T  S  H  R  G  A  K  H  L  P  M  I  N  F  D  H  L  F  A :   C  L  H  D  H  Y  E  E  A  F  D  N  K  L  K  C  I  V  H  Y  F  G  R  I  C  S  S  M  P  A  G  Y  V  S  F  E  R  K  V  L  S  L  Q  F  S  P  S  C  I  P  Y  P  K  E  K  L  W  S  Q  S  N  I  S  L  C  H  Y  E  :  I  S  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0093P12.2" strand="-"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="29851" stop="29714"/>
                    <exon start="29245" stop="29057"/>
                    <exon start="28644" stop="28541"/>
                    <exon start="28203" stop="27999"/>
                    <exon start="27915" stop="27910"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>642</number_coding_nucleotides>
                  <number_encoded_amino_acids>214</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LKHLPISRKVLITAKLTPAKAYSSPFPIFETLSRSTVFQLILLLLKLLPRDEAAKWFEEVVPQLAKLLLRLPLLLETHYENADDGVLKGVKTGLRLLESQEPGIVFLSQELIGALLACALFCLFPTSHRGAKHLPMINFDHLFACLHDHYEEAFDNKLKCIVHYFGRICSSMPAGYVSFERKVLSLQFSPSCIPYPKEKLWSQSNISLCHYEIS</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="29936" e_stop="29691"/>
            <exon e_start="29245" e_stop="29057"/>
            <exon e_start="28644" e_stop="28541"/>
            <exon e_start="28203" e_stop="28091"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.991" acc_prob="0.999" e_score="0.951"/>
          <exon-intron don_prob="0.980" acc_prob="0.924" e_score="0.968"/>
          <exon-intron don_prob="0.981" acc_prob="0.980" e_score="0.962"/>
          <exon-only e_score="0.920"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.951">
            <gDNA_exon_boundary e_start="29936" e_stop="29691" e_length="246"/>
          </exon>
          <intron i_serial="1" don_prob="0.991" acc_prob="0.999">
            <gDNA_intron_boundary i_start="29690" i_stop="29246" i_length="445"/>
          </intron>
          <exon e_serial="2" e_score="0.968">
            <gDNA_exon_boundary e_start="29245" e_stop="29057" e_length="189"/>
          </exon>
          <intron i_serial="2" don_prob="0.980" acc_prob="0.924">
            <gDNA_intron_boundary i_start="29056" i_stop="28645" i_length="412"/>
          </intron>
          <exon e_serial="3" e_score="0.962">
            <gDNA_exon_boundary e_start="28644" e_stop="28541" e_length="104"/>
          </exon>
          <intron i_serial="3" don_prob="0.981" acc_prob="0.980">
            <gDNA_intron_boundary i_start="28540" i_stop="28204" i_length="337"/>
          </intron>
          <exon e_serial="4" e_score="0.920">
            <gDNA_exon_boundary e_start="28203" e_stop="28091" e_length="113"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29936" stop="29691"/>
              <exon start="29245" stop="29057"/>
              <exon start="28644" stop="28541"/>
              <exon start="28203" stop="28091"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E406990" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29936" stop="29691"/>
              <exon start="29245" stop="29057"/>
              <exon start="28644" stop="28541"/>
              <exon start="28203" stop="28129"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E420939" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GAGAACAGAGAAGACTTGAAGTCAATTCTTCCATTTTTACCCTTTTCACTCCGATCATCTTCACTTTTTTGGCCGGCGCCGGTAACTGAAGCACTTACCGATATCTCGAAAGGTCCTAATCACAGCAAAATTGACTCCGGCGAAGGCCTATTCATCGCCATTTCCGATATTCGAAACTCTCTCTCGTTCCACAGTTTTTCAATTGATACTTCTGCTTCTCAAGGTTTTGCTCTGTTCTTCGATGAT : TTGCTTCCTAGGGATGAAGCTGCAAAATGGTTCGAAGAAGTGGTACCACAATTGGCTAAGTTGCTTTTGAGATTGCCTTTATTGCTAGAAACTCATTATGAGAATGCTGATGATGGAGTTTTGAAAGGAGTTAAAACCGGTCTTCGCTTGTTGGAATCACAAGAGCCTGGCATTGTCTTCCTTAGTCAG : GAACTAATTGGTGCTCTTCTTGCATGCGCGTTGTTTTGTCTATTTCCTACCAGTCATAGAGGTGCCAAACACCTTCCAATGATCAACTTTGATCACTTATTTGC : GTGTCTACATGATCATTATGAAGAAGCATTCGATAATAAATTGAAGTGCATTGTTCACTATTTTGGGAGGATATGTTCATCTATGCCAGCAGGCTATGTGTCTTTCGAGCGAA</gDNA_template>
            <first_frame> E  N  R  E  D  L  K  S  I  L  P  F  L  P  F  S  L  R  S  S  S  L  F  W  P  A  P  V  T  E  A  L  T  D  I  S  K  G  P  N  H  S  K  I  D  S  G  E  G  L  F  I  A  I  S  D  I  R  N  S  L  S  F  H  S  F  S  I  D  T  S  A  S  Q  G  F  A  L  F  F  D  D  :  L  L  P  R  D  E  A  A  K  W  F  E  E  V  V  P  Q  L  A  K  L  L  L  R  L  P  L  L  L  E  T  H  Y  E  N  A  D  D  G  V  L  K  G  V  K  T  G  L  R  L  L  E  S  Q  E  P  G  I  V  F  L  S  Q  :  E  L  I  G  A  L  L  A  C  A  L  F  C  L  F  P  T  S  H  R  G  A  K  H  L  P  M  I  N  F  D  H  L  F  A :   C  L  H  D  H  Y  E  E  A  F  D  N  K  L  K  C  I  V  H  Y  F  G  R  I  C  S  S  M  P  A  G  Y  V  S  F  E  R  </first_frame>
            <second_frame>  R  T  E  K  T  *  S  Q  F  F  H  F  Y  P  F  H  S  D  H  L  H  F  F  G  R  R  R  *  L  K  H  L  P  I  S  R  K  V  L  I  T  A  K  L  T  P  A  K  A  Y  S  S  P  F  P  I  F  E  T  L  S  R  S  T  V  F  Q  L  I  L  L  L  L  K  V  L  L  C  S  S  M  I :   C  F  L  G  M  K  L  Q  N  G  S  K  K  W  Y  H  N  W  L  S  C  F  *  D  C  L  Y  C  *  K  L  I  M  R  M  L  M  M  E  F  *  K  E  L  K  P  V  F  A  C  W  N  H  K  S  L  A  L  S  S  L  V  R :   N  *  L  V  L  F  L  H  A  R  C  F  V  Y  F  L  P  V  I  E  V  P  N  T  F  Q  *  S  T  L  I  T  Y  L   : R  V  Y  M  I  I  M  K  K  H  S  I  I  N  *  S  A  L  F  T  I  L  G  G  Y  V  H  L  C  Q  Q  A  M  C  L  S  S  E </second_frame>
            <third_frame>   E  Q  R  R  L  E  V  N  S  S  I  F  T  L  F  T  P  I  I  F  T  F  L  A  G  A  G  N  *  S  T  Y  R  Y  L  E  R  S  *  S  Q  Q  N  *  L  R  R  R  P  I  H  R  H  F  R  Y  S  K  L  S  L  V  P  Q  F  F  N  *  Y  F  C  F  S  R  F  C  S  V  L  R  *   : F  A  S  *  G  *  S  C  K  M  V  R  R  S  G  T  T  I  G  *  V  A  F  E  I  A  F  I  A  R  N  S  L  *  E  C  *  *  W  S  F  E  R  S  *  N  R  S  S  L  V  G  I  T  R  A  W  H  C  L  P  *  S   : G  T  N  W  C  S  S  C  M  R  V  V  L  S  I  S  Y  Q  S  *  R  C  Q  T  P  S  N  D  Q  L  *  S  L  I  C  :  V  S  T  *  S  L  *  R  S  I  R  *  *  I  E  V  H  C  S  L  F  W  E  D  M  F  I  Y  A  S  R  L  C  V  F  R  A   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0093P12.2" strand="-"/>
                <serials PGL_serial="7" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="29936" stop="29691"/>
                    <exon start="29245" stop="29057"/>
                    <exon start="28644" stop="28541"/>
                    <exon start="28203" stop="28092"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>651</number_coding_nucleotides>
                  <number_encoded_amino_acids>217</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ENREDLKSILPFLPFSLRSSSLFWPAPVTEALTDISKGPNHSKIDSGEGLFIAISDIRNSLSFHSFSIDTSASQGFALFFDDLLPRDEAAKWFEEVVPQLAKLLLRLPLLLETHYENADDGVLKGVKTGLRLLESQEPGIVFLSQELIGALLACALFCLFPTSHRGAKHLPMINFDHLFACLHDHYEEAFDNKLKCIVHYFGRICSSMPAGYVSFER</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="+" PGL_start="30066" PGL_stop="34277"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="30066" e_stop="30273"/>
            <exon e_start="30353" e_stop="30474"/>
            <exon e_start="31194" e_stop="31289"/>
            <exon e_start="31566" e_stop="31661"/>
            <exon e_start="32528" e_stop="32606"/>
            <exon e_start="33302" e_stop="33348"/>
            <exon e_start="33644" e_stop="33703"/>
            <exon e_start="33917" e_stop="34277"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.952" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.966" acc_prob="0.972" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.987" e_score="1.000"/>
          <exon-intron don_prob="0.993" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.993" acc_prob="0.928" e_score="1.000"/>
          <exon-intron don_prob="0.988" acc_prob="0.399" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="30066" e_stop="30273" e_length="208"/>
          </exon>
          <intron i_serial="1" don_prob="0.952" acc_prob="0.999">
            <gDNA_intron_boundary i_start="30274" i_stop="30352" i_length="79"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="30353" e_stop="30474" e_length="122"/>
          </exon>
          <intron i_serial="2" don_prob="0.966" acc_prob="0.972">
            <gDNA_intron_boundary i_start="30475" i_stop="31193" i_length="719"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="31194" e_stop="31289" e_length="96"/>
          </exon>
          <intron i_serial="3" don_prob="0.991" acc_prob="0.987">
            <gDNA_intron_boundary i_start="31290" i_stop="31565" i_length="276"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="31566" e_stop="31661" e_length="96"/>
          </exon>
          <intron i_serial="4" don_prob="0.993" acc_prob="0.995">
            <gDNA_intron_boundary i_start="31662" i_stop="32527" i_length="866"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="32528" e_stop="32606" e_length="79"/>
          </exon>
          <intron i_serial="5" don_prob="0.993" acc_prob="0.928">
            <gDNA_intron_boundary i_start="32607" i_stop="33301" i_length="695"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="33302" e_stop="33348" e_length="47"/>
          </exon>
          <intron i_serial="6" don_prob="0.988" acc_prob="0.399">
            <gDNA_intron_boundary i_start="33349" i_stop="33643" i_length="295"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="33644" e_stop="33703" e_length="60"/>
          </exon>
          <intron i_serial="7" don_prob="0.998" acc_prob="0.999">
            <gDNA_intron_boundary i_start="33704" i_stop="33916" i_length="213"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="33917" e_stop="34277" e_length="361"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30066" stop="30273"/>
              <exon start="30353" stop="30474"/>
              <exon start="31194" stop="31289"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E270528" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30087" stop="30273"/>
              <exon start="30353" stop="30474"/>
              <exon start="31194" stop="31289"/>
              <exon start="31566" stop="31661"/>
              <exon start="32528" stop="32606"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E709407" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30091" stop="30273"/>
              <exon start="30353" stop="30474"/>
              <exon start="31194" stop="31289"/>
              <exon start="31566" stop="31661"/>
              <exon start="32528" stop="32606"/>
              <exon start="33302" stop="33348"/>
              <exon start="33644" stop="33703"/>
              <exon start="33917" stop="33976"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E617665" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30096" stop="30273"/>
              <exon start="30353" stop="30452"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E400509" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30097" stop="30273"/>
              <exon start="30353" stop="30474"/>
              <exon start="31194" stop="31289"/>
              <exon start="31566" stop="31661"/>
              <exon start="32528" stop="32601"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E288074" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30100" stop="30273"/>
              <exon start="30353" stop="30474"/>
              <exon start="31194" stop="31266"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E289600" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30167" stop="30273"/>
              <exon start="30353" stop="30474"/>
              <exon start="31194" stop="31289"/>
              <exon start="31566" stop="31661"/>
              <exon start="32528" stop="32606"/>
              <exon start="33302" stop="33348"/>
              <exon start="33644" stop="33703"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E477607" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32578" stop="32606"/>
              <exon start="33302" stop="33348"/>
              <exon start="33644" stop="33703"/>
              <exon start="33917" stop="34241"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E356653" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33995" stop="34277"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E226588" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TGTTACCAAAAACTCAACTGGAAGAAGAAAGTCAAATTACAGTCTGAGAAGATAAAAATGGCGGCTTCAGCTTTCGGACAGTGTAGTCTTCTTCCTCGTACAGTATCTTTGAATCCTCAGCAGTCTCATCGTCAGCTCTGCAGTTTGTCTTTCCATAGACAAACTGTAAATTCTTCACTTCCTGCACTGTCATTCACTCAGTCTATAG : GTTTTGGGTCTGCAATTGAGAGACATTGTGTGGATCGAAACGGGTCGGATTTGTTTAAAACGGATGCTGTTCGTCAGTTGAATGGTTCAGTTATCTCTGCTAAGGGGCATCGGTTTGCTATT : GTGGTTGCACGTTTTAATGATCTGATCACCAAGAAGCTTTTGGAGGGAGCTTTGGAGACTTTCAAGAATTACTCGGTTAGAGAGGAAGATATTGAT : GTTGTGTGGGTTCCTGGTTGTTTTGAAATCGGCGTGACTGCACAGCTTCTTGGAAAGTCACAGAAATATCACGCAATACTCTGCATTGGGGCTGTG : ATCAGAGGTGATACATCTCACTACGATGCAGTCGTTAATGCTGCCACATCTGGAGTACTTTCAGCAGGTCTAAATTCAG : GTACTCCTTGCATATTTGGTGTTTTGACATGTGATACCTTGGAGCAG : GCTTTCAATCGCGTTGGTGGGAAGGCTGGGAATAAAGGTTCCGAAACTGCATTGACTGCT : ATTGAGATGGCATCTTTGTTTGAGCACCACCTAAAGCCTTCAGAGTAGACAATCCTTCTTATCGCGACAAGGTTCTGGATTTTCACCTTTAAACAGAATCTCACTCGCATTACCATCCCAACTAGTTACTCCGACTAATAAGGTTAGACATCGAGGGGGAAAAAGAGTTCCCTCTACTTCTCGGTTTCCTTCCTCGTCTACTCATTGATGCTGGATGTAAACATTCTTGTAAAAGCTGCACTTGTTTGAGAAAATGTTGCACTTTGTTTCAAGTTTGAGTTTTGGATAATAGTATTCTTTCAAGTTTTGAGTTTTGGACTTCAAATTGGTTCTATGTGAATTGGAACTTCAACATTGATTA</gDNA_template>
            <first_frame> C  Y  Q  K  L  N  W  K  K  K  V  K  L  Q  S  E  K  I  K  M  A  A  S  A  F  G  Q  C  S  L  L  P  R  T  V  S  L  N  P  Q  Q  S  H  R  Q  L  C  S  L  S  F  H  R  Q  T  V  N  S  S  L  P  A  L  S  F  T  Q  S  I   : G  F  G  S  A  I  E  R  H  C  V  D  R  N  G  S  D  L  F  K  T  D  A  V  R  Q  L  N  G  S  V  I  S  A  K  G  H  R  F  A  I  :  V  V  A  R  F  N  D  L  I  T  K  K  L  L  E  G  A  L  E  T  F  K  N  Y  S  V  R  E  E  D  I  D  :  V  V  W  V  P  G  C  F  E  I  G  V  T  A  Q  L  L  G  K  S  Q  K  Y  H  A  I  L  C  I  G  A  V  :  I  R  G  D  T  S  H  Y  D  A  V  V  N  A  A  T  S  G  V  L  S  A  G  L  N  S   : G  T  P  C  I  F  G  V  L  T  C  D  T  L  E  Q  :  A  F  N  R  V  G  G  K  A  G  N  K  G  S  E  T  A  L  T  A  :  I  E  M  A  S  L  F  E  H  H  L  K  P  S  E  *  T  I  L  L  I  A  T  R  F  W  I  F  T  F  K  Q  N  L  T  R  I  T  I  P  T  S  Y  S  D  *  *  G  *  T  S  R  G  K  K  S  S  L  Y  F  S  V  S  F  L  V  Y  S  L  M  L  D  V  N  I  L  V  K  A  A  L  V  *  E  N  V  A  L  C  F  K  F  E  F  W  I  I  V  F  F  Q  V  L  S  F  G  L  Q  I  G  S  M  *  I  G  T  S  T  L  I  </first_frame>
            <second_frame>  V  T  K  N  S  T  G  R  R  K  S  N  Y  S  L  R  R  *  K  W  R  L  Q  L  S  D  S  V  V  F  F  L  V  Q  Y  L  *  I  L  S  S  L  I  V  S  S  A  V  C  L  S  I  D  K  L  *  I  L  H  F  L  H  C  H  S  L  S  L  *  :  V  L  G  L  Q  L  R  D  I  V  W  I  E  T  G  R  I  C  L  K  R  M  L  F  V  S  *  M  V  Q  L  S  L  L  R  G  I  G  L  L  L :   W  L  H  V  L  M  I  *  S  P  R  S  F  W  R  E  L  W  R  L  S  R  I  T  R  L  E  R  K  I  L  M :   L  C  G  F  L  V  V  L  K  S  A  *  L  H  S  F  L  E  S  H  R  N  I  T  Q  Y  S  A  L  G  L  * :   S  E  V  I  H  L  T  T  M  Q  S  L  M  L  P  H  L  E  Y  F  Q  Q  V  *  I  Q  :  V  L  L  A  Y  L  V  F  *  H  V  I  P  W  S  R :   L  S  I  A  L  V  G  R  L  G  I  K  V  P  K  L  H  *  L  L :   L  R  W  H  L  C  L  S  T  T  *  S  L  Q  S  R  Q  S  F  L  S  R  Q  G  S  G  F  S  P  L  N  R  I  S  L  A  L  P  S  Q  L  V  T  P  T  N  K  V  R  H  R  G  G  K  R  V  P  S  T  S  R  F  P  S  S  S  T  H  *  C  W  M  *  T  F  L  *  K  L  H  L  F  E  K  M  L  H  F  V  S  S  L  S  F  G  *  *  Y  S  F  K  F  *  V  L  D  F  K  L  V  L  C  E  L  E  L  Q  H  *  L </second_frame>
            <third_frame>   L  P  K  T  Q  L  E  E  E  S  Q  I  T  V  *  E  D  K  N  G  G  F  S  F  R  T  V  *  S  S  S  S  Y  S  I  F  E  S  S  A  V  S  S  S  A  L  Q  F  V  F  P  *  T  N  C  K  F  F  T  S  C  T  V  I  H  S  V  Y  R :   F  W  V  C  N  *  E  T  L  C  G  S  K  R  V  G  F  V  *  N  G  C  C  S  S  V  E  W  F  S  Y  L  C  *  G  A  S  V  C  Y   : C  G  C  T  F  *  *  S  D  H  Q  E  A  F  G  G  S  F  G  D  F  Q  E  L  L  G  *  R  G  R  Y  *   : C  C  V  G  S  W  L  F  *  N  R  R  D  C  T  A  S  W  K  V  T  E  I  S  R  N  T  L  H  W  G  C   : D  Q  R  *  Y  I  S  L  R  C  S  R  *  C  C  H  I  W  S  T  F  S  R  S  K  F  R :   Y  S  L  H  I  W  C  F  D  M  *  Y  L  G  A   : G  F  Q  S  R  W  W  E  G  W  E  *  R  F  R  N  C  I  D  C   : Y  *  D  G  I  F  V  *  A  P  P  K  A  F  R  V  D  N  P  S  Y  R  D  K  V  L  D  F  H  L  *  T  E  S  H  S  H  Y  H  P  N  *  L  L  R  L  I  R  L  D  I  E  G  E  K  E  F  P  L  L  L  G  F  L  P  R  L  L  I  D  A  G  C  K  H  S  C  K  S  C  T  C  L  R  K  C  C  T  L  F  Q  V  *  V  L  D  N  S  I  L  S  S  F  E  F  W  T  S  N  W  F  Y  V  N  W  N  F  N  I  D   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0093P12.2" strand="+"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="30066" stop="30273"/>
                    <exon start="30353" stop="30474"/>
                    <exon start="31194" stop="31289"/>
                    <exon start="31566" stop="31661"/>
                    <exon start="32528" stop="32606"/>
                    <exon start="33302" stop="33348"/>
                    <exon start="33644" stop="33703"/>
                    <exon start="33917" stop="33964"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>753</number_coding_nucleotides>
                  <number_encoded_amino_acids>251</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>CYQKLNWKKKVKLQSEKIKMAASAFGQCSLLPRTVSLNPQQSHRQLCSLSFHRQTVNSSLPALSFTQSIGFGSAIERHCVDRNGSDLFKTDAVRQLNGSVISAKGHRFAIVVARFNDLITKKLLEGALETFKNYSVREEDIDVVWVPGCFEIGVTAQLLGKSQKYHAILCIGAVIRGDTSHYDAVVNAATSGVLSAGLNSGTPCIFGVLTCDTLEQAFNRVGGKAGNKGSETALTAIEMASLFEHHLKPSE*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="30066" e_stop="30273"/>
            <exon e_start="30353" e_stop="30474"/>
            <exon e_start="31194" e_stop="31289"/>
            <exon e_start="31566" e_stop="31661"/>
            <exon e_start="32525" e_stop="32606"/>
            <exon e_start="33302" e_stop="33348"/>
            <exon e_start="33644" e_stop="33703"/>
            <exon e_start="33917" e_stop="34277"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.952" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.966" acc_prob="0.972" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.987" e_score="1.000"/>
          <exon-intron don_prob="0.993" acc_prob="0.992" e_score="0.969"/>
          <exon-intron don_prob="0.993" acc_prob="0.928" e_score="0.866"/>
          <exon-intron don_prob="0.988" acc_prob="0.399" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="30066" e_stop="30273" e_length="208"/>
          </exon>
          <intron i_serial="1" don_prob="0.952" acc_prob="0.999">
            <gDNA_intron_boundary i_start="30274" i_stop="30352" i_length="79"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="30353" e_stop="30474" e_length="122"/>
          </exon>
          <intron i_serial="2" don_prob="0.966" acc_prob="0.972">
            <gDNA_intron_boundary i_start="30475" i_stop="31193" i_length="719"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="31194" e_stop="31289" e_length="96"/>
          </exon>
          <intron i_serial="3" don_prob="0.991" acc_prob="0.987">
            <gDNA_intron_boundary i_start="31290" i_stop="31565" i_length="276"/>
          </intron>
          <exon e_serial="4" e_score="0.969">
            <gDNA_exon_boundary e_start="31566" e_stop="31661" e_length="96"/>
          </exon>
          <intron i_serial="4" don_prob="0.993" acc_prob="0.992">
            <gDNA_intron_boundary i_start="31662" i_stop="32524" i_length="863"/>
          </intron>
          <exon e_serial="5" e_score="0.866">
            <gDNA_exon_boundary e_start="32525" e_stop="32606" e_length="82"/>
          </exon>
          <intron i_serial="5" don_prob="0.993" acc_prob="0.928">
            <gDNA_intron_boundary i_start="32607" i_stop="33301" i_length="695"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="33302" e_stop="33348" e_length="47"/>
          </exon>
          <intron i_serial="6" don_prob="0.988" acc_prob="0.399">
            <gDNA_intron_boundary i_start="33349" i_stop="33643" i_length="295"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="33644" e_stop="33703" e_length="60"/>
          </exon>
          <intron i_serial="7" don_prob="0.998" acc_prob="0.999">
            <gDNA_intron_boundary i_start="33704" i_stop="33916" i_length="213"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="33917" e_stop="34277" e_length="361"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30066" stop="30273"/>
              <exon start="30353" stop="30474"/>
              <exon start="31194" stop="31289"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E270528" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30091" stop="30273"/>
              <exon start="30353" stop="30474"/>
              <exon start="31194" stop="31289"/>
              <exon start="31566" stop="31661"/>
              <exon start="32525" stop="32606"/>
              <exon start="33302" stop="33348"/>
              <exon start="33644" stop="33650"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E407807" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30096" stop="30273"/>
              <exon start="30353" stop="30452"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E400509" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30100" stop="30273"/>
              <exon start="30353" stop="30474"/>
              <exon start="31194" stop="31266"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E289600" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32578" stop="32606"/>
              <exon start="33302" stop="33348"/>
              <exon start="33644" stop="33703"/>
              <exon start="33917" stop="34241"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E356653" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33995" stop="34277"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E226588" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TGTTACCAAAAACTCAACTGGAAGAAGAAAGTCAAATTACAGTCTGAGAAGATAAAAATGGCGGCTTCAGCTTTCGGACAGTGTAGTCTTCTTCCTCGTACAGTATCTTTGAATCCTCAGCAGTCTCATCGTCAGCTCTGCAGTTTGTCTTTCCATAGACAAACTGTAAATTCTTCACTTCCTGCACTGTCATTCACTCAGTCTATAG : GTTTTGGGTCTGCAATTGAGAGACATTGTGTGGATCGAAACGGGTCGGATTTGTTTAAAACGGATGCTGTTCGTCAGTTGAATGGTTCAGTTATCTCTGCTAAGGGGCATCGGTTTGCTATT : GTGGTTGCACGTTTTAATGATCTGATCACCAAGAAGCTTTTGGAGGGAGCTTTGGAGACTTTCAAGAATTACTCGGTTAGAGAGGAAGATATTGAT : GTTGTGTGGGTTCCTGGTTGTTTTGAAATCGGCGTGACTGCACAGCTTCTTGGAAAGTCACAGAAATATCACGCAATACTCTGCATTGGGGCTGTG : TAGATCAGAGGTGATACATCTCACTACGATGCAGTCGTTAATGCTGCCACATCTGGAGTACTTTCAGCAGGTCTAAATTCAG : GTACTCCTTGCATATTTGGTGTTTTGACATGTGATACCTTGGAGCAG : GCTTTCAATCGCGTTGGTGGGAAGGCTGGGAATAAAGGTTCCGAAACTGCATTGACTGCT : ATTGAGATGGCATCTTTGTTTGAGCACCACCTAAAGCCTTCAGAGTAGACAATCCTTCTTATCGCGACAAGGTTCTGGATTTTCACCTTTAAACAGAATCTCACTCGCATTACCATCCCAACTAGTTACTCCGACTAATAAGGTTAGACATCGAGGGGGAAAAAGAGTTCCCTCTACTTCTCGGTTTCCTTCCTCGTCTACTCATTGATGCTGGATGTAAACATTCTTGTAAAAGCTGCACTTGTTTGAGAAAATGTTGCACTTTGTTTCAAGTTTGAGTTTTGGATAATAGTATTCTTTCAAGTTTTGAGTTTTGGACTTCAAATTGGTTCTATGTGAATTGGAACTTCAACATTGATTA</gDNA_template>
            <first_frame> C  Y  Q  K  L  N  W  K  K  K  V  K  L  Q  S  E  K  I  K  M  A  A  S  A  F  G  Q  C  S  L  L  P  R  T  V  S  L  N  P  Q  Q  S  H  R  Q  L  C  S  L  S  F  H  R  Q  T  V  N  S  S  L  P  A  L  S  F  T  Q  S  I   : G  F  G  S  A  I  E  R  H  C  V  D  R  N  G  S  D  L  F  K  T  D  A  V  R  Q  L  N  G  S  V  I  S  A  K  G  H  R  F  A  I  :  V  V  A  R  F  N  D  L  I  T  K  K  L  L  E  G  A  L  E  T  F  K  N  Y  S  V  R  E  E  D  I  D  :  V  V  W  V  P  G  C  F  E  I  G  V  T  A  Q  L  L  G  K  S  Q  K  Y  H  A  I  L  C  I  G  A  V  :  *  I  R  G  D  T  S  H  Y  D  A  V  V  N  A  A  T  S  G  V  L  S  A  G  L  N  S   : G  T  P  C  I  F  G  V  L  T  C  D  T  L  E  Q  :  A  F  N  R  V  G  G  K  A  G  N  K  G  S  E  T  A  L  T  A  :  I  E  M  A  S  L  F  E  H  H  L  K  P  S  E  *  T  I  L  L  I  A  T  R  F  W  I  F  T  F  K  Q  N  L  T  R  I  T  I  P  T  S  Y  S  D  *  *  G  *  T  S  R  G  K  K  S  S  L  Y  F  S  V  S  F  L  V  Y  S  L  M  L  D  V  N  I  L  V  K  A  A  L  V  *  E  N  V  A  L  C  F  K  F  E  F  W  I  I  V  F  F  Q  V  L  S  F  G  L  Q  I  G  S  M  *  I  G  T  S  T  L  I  </first_frame>
            <second_frame>  V  T  K  N  S  T  G  R  R  K  S  N  Y  S  L  R  R  *  K  W  R  L  Q  L  S  D  S  V  V  F  F  L  V  Q  Y  L  *  I  L  S  S  L  I  V  S  S  A  V  C  L  S  I  D  K  L  *  I  L  H  F  L  H  C  H  S  L  S  L  *  :  V  L  G  L  Q  L  R  D  I  V  W  I  E  T  G  R  I  C  L  K  R  M  L  F  V  S  *  M  V  Q  L  S  L  L  R  G  I  G  L  L  L :   W  L  H  V  L  M  I  *  S  P  R  S  F  W  R  E  L  W  R  L  S  R  I  T  R  L  E  R  K  I  L  M :   L  C  G  F  L  V  V  L  K  S  A  *  L  H  S  F  L  E  S  H  R  N  I  T  Q  Y  S  A  L  G  L  C :   R  S  E  V  I  H  L  T  T  M  Q  S  L  M  L  P  H  L  E  Y  F  Q  Q  V  *  I  Q  :  V  L  L  A  Y  L  V  F  *  H  V  I  P  W  S  R :   L  S  I  A  L  V  G  R  L  G  I  K  V  P  K  L  H  *  L  L :   L  R  W  H  L  C  L  S  T  T  *  S  L  Q  S  R  Q  S  F  L  S  R  Q  G  S  G  F  S  P  L  N  R  I  S  L  A  L  P  S  Q  L  V  T  P  T  N  K  V  R  H  R  G  G  K  R  V  P  S  T  S  R  F  P  S  S  S  T  H  *  C  W  M  *  T  F  L  *  K  L  H  L  F  E  K  M  L  H  F  V  S  S  L  S  F  G  *  *  Y  S  F  K  F  *  V  L  D  F  K  L  V  L  C  E  L  E  L  Q  H  *  L </second_frame>
            <third_frame>   L  P  K  T  Q  L  E  E  E  S  Q  I  T  V  *  E  D  K  N  G  G  F  S  F  R  T  V  *  S  S  S  S  Y  S  I  F  E  S  S  A  V  S  S  S  A  L  Q  F  V  F  P  *  T  N  C  K  F  F  T  S  C  T  V  I  H  S  V  Y  R :   F  W  V  C  N  *  E  T  L  C  G  S  K  R  V  G  F  V  *  N  G  C  C  S  S  V  E  W  F  S  Y  L  C  *  G  A  S  V  C  Y   : C  G  C  T  F  *  *  S  D  H  Q  E  A  F  G  G  S  F  G  D  F  Q  E  L  L  G  *  R  G  R  Y  *   : C  C  V  G  S  W  L  F  *  N  R  R  D  C  T  A  S  W  K  V  T  E  I  S  R  N  T  L  H  W  G  C   : V  D  Q  R  *  Y  I  S  L  R  C  S  R  *  C  C  H  I  W  S  T  F  S  R  S  K  F  R :   Y  S  L  H  I  W  C  F  D  M  *  Y  L  G  A   : G  F  Q  S  R  W  W  E  G  W  E  *  R  F  R  N  C  I  D  C   : Y  *  D  G  I  F  V  *  A  P  P  K  A  F  R  V  D  N  P  S  Y  R  D  K  V  L  D  F  H  L  *  T  E  S  H  S  H  Y  H  P  N  *  L  L  R  L  I  R  L  D  I  E  G  E  K  E  F  P  L  L  L  G  F  L  P  R  L  L  I  D  A  G  C  K  H  S  C  K  S  C  T  C  L  R  K  C  C  T  L  F  Q  V  *  V  L  D  N  S  I  L  S  S  F  E  F  W  T  S  N  W  F  Y  V  N  W  N  F  N  I  D   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0093P12.2" strand="+"/>
                <serials PGL_serial="8" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="30066" stop="30273"/>
                    <exon start="30353" stop="30474"/>
                    <exon start="31194" stop="31289"/>
                    <exon start="31566" stop="31661"/>
                    <exon start="32525" stop="32527"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>522</number_coding_nucleotides>
                  <number_encoded_amino_acids>174</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>CYQKLNWKKKVKLQSEKIKMAASAFGQCSLLPRTVSLNPQQSHRQLCSLSFHRQTVNSSLPALSFTQSIGFGSAIERHCVDRNGSDLFKTDAVRQLNGSVISAKGHRFAIVVARFNDLITKKLLEGALETFKNYSVREEDIDVVWVPGCFEIGVTAQLLGKSQKYHAILCIGAV*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0093P12.2" strand="+"/>
                <serials PGL_serial="8" AGS_serial="2" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="32528" stop="32606"/>
                    <exon start="33302" stop="33348"/>
                    <exon start="33644" stop="33703"/>
                    <exon start="33917" stop="33964"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>231</number_coding_nucleotides>
                  <number_encoded_amino_acids>77</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IRGDTSHYDAVVNAATSGVLSAGLNSGTPCIFGVLTCDTLEQAFNRVGGKAGNKGSETALTAIEMASLFEHHLKPSE*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="-" PGL_start="35704" PGL_stop="35043"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="35704" e_stop="35043"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="35704" e_stop="35043" e_length="662"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="35704" stop="35043"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E249331" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TCACTGACACTTCAAAGTGTAAGATCTTTTTATGATGATGGGAACCATGAAAACAGAAAACGACGAATCAGGTTCAACTTGCCAGAGAACTCTGGCATGGATCCTGAAGTTAGGGATGAGCTTATAGATTTGGTTCAGGCAAAGGAGTCAGGGGTTGCATATATAATGGGACACTCATATGTCAAGGCACGTAGATTGTCCTCTTGCTGGAAGAAATTTGTCATTGACGTTGCATATTCATTTCTGCGTAAGAACTGCAGAGCTTCCGCTGTTGCACTTAACATTCCTCACATTAGTCTTATTGAAGTTGGCATGATATACTATGTCTAGAGAGAGGCTTGGAGCCAAGAGAACATTGAACGCCTTCATCGGAGTTACTTGCAGAATCTTTTCACAGGTAGATGAACTTTTTCTTGAATATTTTTGCCCCAAATACCAAGTCTTGCTCATCACTAATCTTTGTATTGTTAGTATATATATATTTGTTATATCATCTCTTTCACATATGACCTGTATTTATTTGTGTATTTTATAGTTAGATAGAGACAGTAGTTATAATTTTAATAGGTGATTTAAGCTATGATTGAAATAGCTATATAGGCTTTTGTAATCTAACATTTTGATTTCTTTTTAAAAAAATTGTAAACTATTTATTAACATTA</gDNA_template>
            <first_frame> S  L  T  L  Q  S  V  R  S  F  Y  D  D  G  N  H  E  N  R  K  R  R  I  R  F  N  L  P  E  N  S  G  M  D  P  E  V  R  D  E  L  I  D  L  V  Q  A  K  E  S  G  V  A  Y  I  M  G  H  S  Y  V  K  A  R  R  L  S  S  C  W  K  K  F  V  I  D  V  A  Y  S  F  L  R  K  N  C  R  A  S  A  V  A  L  N  I  P  H  I  S  L  I  E  V  G  M  I  Y  Y  V  *  R  E  A  W  S  Q  E  N  I  E  R  L  H  R  S  Y  L  Q  N  L  F  T  G  R  *  T  F  S  *  I  F  L  P  Q  I  P  S  L  A  H  H  *  S  L  Y  C  *  Y  I  Y  I  C  Y  I  I  S  F  T  Y  D  L  Y  L  F  V  Y  F  I  V  R  *  R  Q  *  L  *  F  *  *  V  I  *  A  M  I  E  I  A  I  *  A  F  V  I  *  H  F  D  F  F  L  K  K  L  *  T  I  Y  *  H   </first_frame>
            <second_frame>  H  *  H  F  K  V  *  D  L  F  M  M  M  G  T  M  K  T  E  N  D  E  S  G  S  T  C  Q  R  T  L  A  W  I  L  K  L  G  M  S  L  *  I  W  F  R  Q  R  S  Q  G  L  H  I  *  W  D  T  H  M  S  R  H  V  D  C  P  L  A  G  R  N  L  S  L  T  L  H  I  H  F  C  V  R  T  A  E  L  P  L  L  H  L  T  F  L  T  L  V  L  L  K  L  A  *  Y  T  M  S  R  E  R  L  G  A  K  R  T  L  N  A  F  I  G  V  T  C  R  I  F  S  Q  V  D  E  L  F  L  E  Y  F  C  P  K  Y  Q  V  L  L  I  T  N  L  C  I  V  S  I  Y  I  F  V  I  S  S  L  S  H  M  T  C  I  Y  L  C  I  L  *  L  D  R  D  S  S  Y  N  F  N  R  *  F  K  L  *  L  K  *  L  Y  R  L  L  *  S  N  I  L  I  S  F  *  K  N  C  K  L  F  I  N  I  </second_frame>
            <third_frame>   T  D  T  S  K  C  K  I  F  L  *  *  W  E  P  *  K  Q  K  T  T  N  Q  V  Q  L  A  R  E  L  W  H  G  S  *  S  *  G  *  A  Y  R  F  G  S  G  K  G  V  R  G  C  I  Y  N  G  T  L  I  C  Q  G  T  *  I  V  L  L  L  E  E  I  C  H  *  R  C  I  F  I  S  A  *  E  L  Q  S  F  R  C  C  T  *  H  S  S  H  *  S  Y  *  S  W  H  D  I  L  C  L  E  R  G  L  E  P  R  E  H  *  T  P  S  S  E  L  L  A  E  S  F  H  R  *  M  N  F  F  L  N  I  F  A  P  N  T  K  S  C  S  S  L  I  F  V  L  L  V  Y  I  Y  L  L  Y  H  L  F  H  I  *  P  V  F  I  C  V  F  Y  S  *  I  E  T  V  V  I  I  L  I  G  D  L  S  Y  D  *  N  S  Y  I  G  F  C  N  L  T  F  *  F  L  F  K  K  I  V  N  Y  L  L  T  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0093P12.2" strand="-"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="35704" stop="35375"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>327</number_coding_nucleotides>
                  <number_encoded_amino_acids>109</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SLTLQSVRSFYDDGNHENRKRRIRFNLPENSGMDPEVRDELIDLVQAKESGVAYIMGHSYVKARRLSSCWKKFVIDVAYSFLRKNCRASAVALNIPHISLIEVGMIYYV*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0093P12.2" strand="-"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="35388" stop="35170"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>216</number_coding_nucleotides>
                  <number_encoded_amino_acids>72</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>YTMSRERLGAKRTLNAFIGVTCRIFSQVDELFLEYFCPKYQVLLITNLCIVSIYIFVISSLSHMTCIYLCIL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="-" PGL_start="38510" PGL_stop="36411"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="38510" e_stop="38336"/>
            <exon e_start="37852" e_stop="37800"/>
            <exon e_start="37582" e_stop="37468"/>
            <exon e_start="37374" e_stop="37123"/>
            <exon e_start="36456" e_stop="36411"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.992" acc_prob="0.977" e_score="1.000"/>
          <exon-intron don_prob="0.943" acc_prob="0.934" e_score="1.000"/>
          <exon-intron don_prob="0.980" acc_prob="0.973" e_score="0.996"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="38510" e_stop="38336" e_length="175"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.992">
            <gDNA_intron_boundary i_start="38335" i_stop="37853" i_length="483"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="37852" e_stop="37800" e_length="53"/>
          </exon>
          <intron i_serial="2" don_prob="0.992" acc_prob="0.977">
            <gDNA_intron_boundary i_start="37799" i_stop="37583" i_length="217"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="37582" e_stop="37468" e_length="115"/>
          </exon>
          <intron i_serial="3" don_prob="0.943" acc_prob="0.934">
            <gDNA_intron_boundary i_start="37467" i_stop="37375" i_length="93"/>
          </intron>
          <exon e_serial="4" e_score="0.996">
            <gDNA_exon_boundary e_start="37374" e_stop="37123" e_length="252"/>
          </exon>
          <intron i_serial="4" don_prob="0.980" acc_prob="0.973">
            <gDNA_intron_boundary i_start="37122" i_stop="36457" i_length="666"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="36456" e_stop="36411" e_length="46"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="38510" stop="38336"/>
              <exon start="37852" stop="37800"/>
              <exon start="37582" stop="37468"/>
              <exon start="37374" stop="37123"/>
              <exon start="36456" stop="36411"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E253402" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GCACCAATCGTGCTCATCTGGTTGATATCAATTATGATAATTGGGTTGTACAACACTATCATTTGGAACCCCAAAATTGTGTCTGCTTTTTCGCCCTATTATATCATCAAGTTTTTTAGGGATACAGGAAAAGATGGTTGGATTTCTCTTGGAGGTATTCTCCTCTCAGTTGCAG : GTACTGAAGCTATGTATGCAGATCTTGGTCATTTCTCTGCCTTCTCCATGAGG : ATTACATTTGCATTTGTGGTGTATCCGTGCTTGGTGATACAGTACATGGGTCAAGCTGCTTTTCTGTCAAAAAATCTAGATTCCATTCCAAATAGCTTCTATAGCTCAATACCTG : ATGGTGTATACTGGCCTGTTTTTGTTATTGCAACCCTTGCAGCCATTGTAGGCAGCCAATCTATCATCACAGCCACATTCTCAATCGTCAAGCAATGTAATTCACTAGGTTGCTTCCCGCGGGTCAAGATTGTCCACACCTCAAAGCATAAAGGGCAGATCTATGTACCAGAAATAAATTGGATCCTGATGATTCTCACTCTTGCTGTGGCTATCGGGTTCCAAGATACAACTTTGATTGGAAATGCATACG : GGCTAGCTTGCATGACAGTTATGTTTATCACAACATTCCTCATGAC</gDNA_template>
            <first_frame> A  P  I  V  L  I  W  L  I  S  I  M  I  I  G  L  Y  N  T  I  I  W  N  P  K  I  V  S  A  F  S  P  Y  Y  I  I  K  F  F  R  D  T  G  K  D  G  W  I  S  L  G  G  I  L  L  S  V  A   : G  T  E  A  M  Y  A  D  L  G  H  F  S  A  F  S  M  R  :  I  T  F  A  F  V  V  Y  P  C  L  V  I  Q  Y  M  G  Q  A  A  F  L  S  K  N  L  D  S  I  P  N  S  F  Y  S  S  I  P   : D  G  V  Y  W  P  V  F  V  I  A  T  L  A  A  I  V  G  S  Q  S  I  I  T  A  T  F  S  I  V  K  Q  C  N  S  L  G  C  F  P  R  V  K  I  V  H  T  S  K  H  K  G  Q  I  Y  V  P  E  I  N  W  I  L  M  I  L  T  L  A  V  A  I  G  F  Q  D  T  T  L  I  G  N  A  Y   : G  L  A  C  M  T  V  M  F  I  T  T  F  L  M   </first_frame>
            <second_frame>  H  Q  S  C  S  S  G  *  Y  Q  L  *  *  L  G  C  T  T  L  S  F  G  T  P  K  L  C  L  L  F  R  P  I  I  S  S  S  F  L  G  I  Q  E  K  M  V  G  F  L  L  E  V  F  S  S  Q  L  Q  :  V  L  K  L  C  M  Q  I  L  V  I  S  L  P  S  P  *  G :   L  H  L  H  L  W  C  I  R  A  W  *  Y  S  T  W  V  K  L  L  F  C  Q  K  I  *  I  P  F  Q  I  A  S  I  A  Q  Y  L  :  M  V  Y  T  G  L  F  L  L  L  Q  P  L  Q  P  L  *  A  A  N  L  S  S  Q  P  H  S  Q  S  S  S  N  V  I  H  *  V  A  S  R  G  S  R  L  S  T  P  Q  S  I  K  G  R  S  M  Y  Q  K  *  I  G  S  *  *  F  S  L  L  L  W  L  S  G  S  K  I  Q  L  *  L  E  M  H  T  :  G  *  L  A  *  Q  L  C  L  S  Q  H  S  S  *  </second_frame>
            <third_frame>   T  N  R  A  H  L  V  D  I  N  Y  D  N  W  V  V  Q  H  Y  H  L  E  P  Q  N  C  V  C  F  F  A  L  L  Y  H  Q  V  F  *  G  Y  R  K  R  W  L  D  F  S  W  R  Y  S  P  L  S  C  R :   Y  *  S  Y  V  C  R  S  W  S  F  L  C  L  L  H  E   : D  Y  I  C  I  C  G  V  S  V  L  G  D  T  V  H  G  S  S  C  F  S  V  K  K  S  R  F  H  S  K  *  L  L  *  L  N  T  * :   W  C  I  L  A  C  F  C  Y  C  N  P  C  S  H  C  R  Q  P  I  Y  H  H  S  H  I  L  N  R  Q  A  M  *  F  T  R  L  L  P  A  G  Q  D  C  P  H  L  K  A  *  R  A  D  L  C  T  R  N  K  L  D  P  D  D  S  H  S  C  C  G  Y  R  V  P  R  Y  N  F  D  W  K  C  I  R :   A  S  L  H  D  S  Y  V  Y  H  N  I  P  H  D </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0093P12.2" strand="-"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="38510" stop="38336"/>
                    <exon start="37852" stop="37800"/>
                    <exon start="37582" stop="37468"/>
                    <exon start="37374" stop="37123"/>
                    <exon start="36456" stop="36413"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>639</number_coding_nucleotides>
                  <number_encoded_amino_acids>213</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>APIVLIWLISIMIIGLYNTIIWNPKIVSAFSPYYIIKFFRDTGKDGWISLGGILLSVAGTEAMYADLGHFSAFSMRITFAFVVYPCLVIQYMGQAAFLSKNLDSIPNSFYSSIPDGVYWPVFVIATLAAIVGSQSIITATFSIVKQCNSLGCFPRVKIVHTSKHKGQIYVPEINWILMILTLAVAIGFQDTTLIGNAYGLACMTVMFITTFLM</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="+" PGL_start="45713" PGL_stop="46732"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="45713" e_stop="46732"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="45713" e_stop="46732" e_length="1020"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="45713" stop="46316"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E238280" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="45713" stop="46236"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E228128" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="45715" stop="46188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E240935" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="45716" stop="46384"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E235579" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="45718" stop="46371"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E376659" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="45718" stop="46267"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E231424" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="45718" stop="46173"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E237672" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="45734" stop="46524"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E261709" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="45734" stop="46243"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E264814" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="45734" stop="46232"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E264329" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="45749" stop="46269"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E231616" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="45788" stop="46415"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E213719" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="45839" stop="46468"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E228500" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="45839" stop="46072"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E239948" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46020" stop="46653"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E283546" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46083" stop="46519"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E288660" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46106" stop="46392"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E338285" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46350" stop="46732"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E342303" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TCTCCAAAGATACTTTGTAACCACTATAGATCCATCAAAATCTCAAAAACCAAAGGCTATTATCCCATAATCCCCCAAAACCAAGAAATATCAATGTCAAAAAACAATACAATCCCCCTAAAACCAATAAACATCAGTGTCAAAAATCAACATTTTATTTAAACCAAGAAAAAGGCTATAGATTCCCACAACTTTGCTCTTACATCATTCCAAAATCATTTCACCTTTTTCCCTTTAAATTATACCCTTTAGTGTGAAAACAACATATAGAAATCTTCACTTTCTCTATTTAACTCATACTATCTACTGATTTGTGATTTCACCAAAAAAAAAAATTTGTTAAAGATTGGCACATTTTCAAGTTCAGTATTCATTCGATTTTTGATATCTACATAAAAAAAAAGTGTCCTGGTACTACTCAATATTCCTCAGAACGACTTCATATTCAGGTCTCGAATTCAAAACCTCACATCAAGATTCTTAGGAAATTTCAAGATTGGTTGAAAAACTCATATCCTTCTCTAAGTTTCAAGATTGGTTCCAAATTAAAACTCGAGACTTCTGAGTAAGAGCGTACGACTAGTAATGAACATGGACATGGAATCATCAGAGGCAAAATTGAGATCATCAAAAGGGTTTATTAATTTGGAGGAACATCAACAATATTTCAACAACATTATGGAAGGCAATAAGATGGAGCATAAGAGATCATTTACACAAGGACATGGCAAGAAAATGTTGTCAATGAATTATTTTAGCTTAGAGTCAATTATTTTGTTACTTGGTCTTACAGCATCTTTGTTACTTTTGCCATTGATGCTTCCACCATTGCCACCACCACCTTTTATGTTGTTGTTAGTCCCAATTTTCATTCTTGTTGTTCTTATGATCTTAGCTTTTATGCCTTCTAATGTTAGGAATGTGACTTGCTCATATCTTTAATTGTGTGGTTTAATTTAGAAGAAAATATCAAAGTAGATTCACTTGTTTTTTACATAATGATTAAATACATTTTTTTCA</gDNA_template>
            <first_frame> S  P  K  I  L  C  N  H  Y  R  S  I  K  I  S  K  T  K  G  Y  Y  P  I  I  P  Q  N  Q  E  I  S  M  S  K  N  N  T  I  P  L  K  P  I  N  I  S  V  K  N  Q  H  F  I  *  T  K  K  K  A  I  D  S  H  N  F  A  L  T  S  F  Q  N  H  F  T  F  F  P  L  N  Y  T  L  *  C  E  N  N  I  *  K  S  S  L  S  L  F  N  S  Y  Y  L  L  I  C  D  F  T  K  K  K  N  L  L  K  I  G  T  F  S  S  S  V  F  I  R  F  L  I  S  T  *  K  K  S  V  L  V  L  L  N  I  P  Q  N  D  F  I  F  R  S  R  I  Q  N  L  T  S  R  F  L  G  N  F  K  I  G  *  K  T  H  I  L  L  *  V  S  R  L  V  P  N  *  N  S  R  L  L  S  K  S  V  R  L  V  M  N  M  D  M  E  S  S  E  A  K  L  R  S  S  K  G  F  I  N  L  E  E  H  Q  Q  Y  F  N  N  I  M  E  G  N  K  M  E  H  K  R  S  F  T  Q  G  H  G  K  K  M  L  S  M  N  Y  F  S  L  E  S  I  I  L  L  L  G  L  T  A  S  L  L  L  L  P  L  M  L  P  P  L  P  P  P  P  F  M  L  L  L  V  P  I  F  I  L  V  V  L  M  I  L  A  F  M  P  S  N  V  R  N  V  T  C  S  Y  L  *  L  C  G  L  I  *  K  K  I  S  K  *  I  H  L  F  F  T  *  *  L  N  T  F  F  S </first_frame>
            <second_frame>  L  Q  R  Y  F  V  T  T  I  D  P  S  K  S  Q  K  P  K  A  I  I  P  *  S  P  K  T  K  K  Y  Q  C  Q  K  T  I  Q  S  P  *  N  Q  *  T  S  V  S  K  I  N  I  L  F  K  P  R  K  R  L  *  I  P  T  T  L  L  L  H  H  S  K  I  I  S  P  F  S  L  *  I  I  P  F  S  V  K  T  T  Y  R  N  L  H  F  L  Y  L  T  H  T  I  Y  *  F  V  I  S  P  K  K  K  I  C  *  R  L  A  H  F  Q  V  Q  Y  S  F  D  F  *  Y  L  H  K  K  K  V  S  W  Y  Y  S  I  F  L  R  T  T  S  Y  S  G  L  E  F  K  T  S  H  Q  D  S  *  E  I  S  R  L  V  E  K  L  I  S  F  S  K  F  Q  D  W  F  Q  I  K  T  R  D  F  *  V  R  A  Y  D  *  *  *  T  W  T  W  N  H  Q  R  Q  N  *  D  H  Q  K  G  L  L  I  W  R  N  I  N  N  I  S  T  T  L  W  K  A  I  R  W  S  I  R  D  H  L  H  K  D  M  A  R  K  C  C  Q  *  I  I  L  A  *  S  Q  L  F  C  Y  L  V  L  Q  H  L  C  Y  F  C  H  *  C  F  H  H  C  H  H  H  L  L  C  C  C  *  S  Q  F  S  F  L  L  F  L  *  S  *  L  L  C  L  L  M  L  G  M  *  L  A  H  I  F  N  C  V  V  *  F  R  R  K  Y  Q  S  R  F  T  C  F  L  H  N  D  *  I  H  F  F   </second_frame>
            <third_frame>   S  K  D  T  L  *  P  L  *  I  H  Q  N  L  K  N  Q  R  L  L  S  H  N  P  P  K  P  R  N  I  N  V  K  K  Q  Y  N  P  P  K  T  N  K  H  Q  C  Q  K  S  T  F  Y  L  N  Q  E  K  G  Y  R  F  P  Q  L  C  S  Y  I  I  P  K  S  F  H  L  F  P  F  K  L  Y  P  L  V  *  K  Q  H  I  E  I  F  T  F  S  I  *  L  I  L  S  T  D  L  *  F  H  Q  K  K  K  F  V  K  D  W  H  I  F  K  F  S  I  H  S  I  F  D  I  Y  I  K  K  K  C  P  G  T  T  Q  Y  S  S  E  R  L  H  I  Q  V  S  N  S  K  P  H  I  K  I  L  R  K  F  Q  D  W  L  K  N  S  Y  P  S  L  S  F  K  I  G  S  K  L  K  L  E  T  S  E  *  E  R  T  T  S  N  E  H  G  H  G  I  I  R  G  K  I  E  I  I  K  R  V  Y  *  F  G  G  T  S  T  I  F  Q  Q  H  Y  G  R  Q  *  D  G  A  *  E  I  I  Y  T  R  T  W  Q  E  N  V  V  N  E  L  F  *  L  R  V  N  Y  F  V  T  W  S  Y  S  I  F  V  T  F  A  I  D  A  S  T  I  A  T  T  T  F  Y  V  V  V  S  P  N  F  H  S  C  C  S  Y  D  L  S  F  Y  A  F  *  C  *  E  C  D  L  L  I  S  L  I  V  W  F  N  L  E  E  N  I  K  V  D  S  L  V  F  Y  I  M  I  K  Y  I  F  F  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0093P12.2" strand="+"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="46262" stop="46654"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>390</number_coding_nucleotides>
                  <number_encoded_amino_acids>130</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NSRLLSKSVRLVMNMDMESSEAKLRSSKGFINLEEHQQYFNNIMEGNKMEHKRSFTQGHGKKMLSMNYFSLESIILLLGLTASLLLLPLMLPPLPPPPFMLLLVPIFILVVLMILAFMPSNVRNVTCSYL*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0093P12.2" strand="+"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="46030" stop="46281"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>249</number_coding_nucleotides>
                  <number_encoded_amino_acids>83</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FHQKKKFVKDWHIFKFSIHSIFDIYIKKKCPGTTQYSSERLHIQVSNSKPHIKILRKFQDWLKNSYPSLSFKIGSKLKLETSE*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0093P12.2" strand="+"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="45742" stop="45969"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>225</number_coding_nucleotides>
                  <number_encoded_amino_acids>75</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IHQNLKNQRLLSHNPPKPRNINVKKQYNPPKTNKHQCQKSTFYLNQEKGYRFPQLCSYIIPKSFHLFPFKLYPLV*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="-" PGL_start="46717" PGL_stop="46023"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="46717" e_stop="46023"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.993"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.993">
            <gDNA_exon_boundary e_start="46717" e_stop="46023" e_length="695"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46717" stop="46023"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E376658" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46637" stop="46038"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E333375" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TAATCATTATGTAAAAAACAAGTGAATCTACTTTGATATTTTCTTCTAAATTAAACCACACAATTAAAGATATGAGCAAGTCACATTCCTAACATTAGAAGGCATAAAAGCTAAGATCATAAGAACAACAAGAATGAAAATTGGGACTAACAACAACATAAAAGGTGGTGGTGGCAATGGTGGAAGCATCAATGGCAAAAGTAACAAAGATGCTGTAAGACCAAGTAACAAAATAATTGACTCTAAGCTAAAATAATTCATTGACAACATTTTCTTGCCATGTCCTTGTGTAAATGATCTCTTATGCTCCATCTTATTGCCTTCCATAATGTTGTTGAAATATTGTTGATGTTCCTCCAAATTAATAAACCCTTTTGATGATCTCAATTTTGCCTCTGATGATTCCATGTCCATGTTCATTACTAGTCGTACGCTCTTACTCAGAAGTCTCGAGTTTTAATTTGGAACCAATCTTGAAACTTAGAGAAGGATATGAGTTTTTCAACCAATCTTGAAATTTCCTAAGAATCTTGATGTGAGGTTTTGAATTCGAGACCTGAATATGAAGTCGTTCTGAGGAATATTGAGTAGTACCAGGACACTTTTTTTTTATGTAGATATCAAAAATCGAATGAATACTGAACTTGAAAATGTGCCAATCTTTAACAAATTTTTTTTTTTGGTGAAATCACAAA</gDNA_template>
            <first_frame> *  S  L  C  K  K  Q  V  N  L  L  *  Y  F  L  L  N  *  T  T  Q  L  K  I  *  A  S  H  I  P  N  I  R  R  H  K  S  *  D  H  K  N  N  K  N  E  N  W  D  *  Q  Q  H  K  R  W  W  W  Q  W  W  K  H  Q  W  Q  K  *  Q  R  C  C  K  T  K  *  Q  N  N  *  L  *  A  K  I  I  H  *  Q  H  F  L  A  M  S  L  C  K  *  S  L  M  L  H  L  I  A  F  H  N  V  V  E  I  L  L  M  F  L  Q  I  N  K  P  F  *  *  S  Q  F  C  L  *  *  F  H  V  H  V  H  Y  *  S  Y  A  L  T  Q  K  S  R  V  L  I  W  N  Q  S  *  N  L  E  K  D  M  S  F  S  T  N  L  E  I  S  *  E  S  *  C  E  V  L  N  S  R  P  E  Y  E  V  V  L  R  N  I  E  *  Y  Q  D  T  F  F  L  C  R  Y  Q  K  S  N  E  Y  *  T  *  K  C  A  N  L  *  Q  I  F  F  F  G  E  I  T   </first_frame>
            <second_frame>  N  H  Y  V  K  N  K  *  I  Y  F  D  I  F  F  *  I  K  P  H  N  *  R  Y  E  Q  V  T  F  L  T  L  E  G  I  K  A  K  I  I  R  T  T  R  M  K  I  G  T  N  N  N  I  K  G  G  G  G  N  G  G  S  I  N  G  K  S  N  K  D  A  V  R  P  S  N  K  I  I  D  S  K  L  K  *  F  I  D  N  I  F  L  P  C  P  C  V  N  D  L  L  C  S  I  L  L  P  S  I  M  L  L  K  Y  C  *  C  S  S  K  L  I  N  P  F  D  D  L  N  F  A  S  D  D  S  M  S  M  F  I  T  S  R  T  L  L  L  R  S  L  E  F  *  F  G  T  N  L  E  T  *  R  R  I  *  V  F  Q  P  I  L  K  F  P  K  N  L  D  V  R  F  *  I  R  D  L  N  M  K  S  F  *  G  I  L  S  S  T  R  T  L  F  F  Y  V  D  I  K  N  R  M  N  T  E  L  E  N  V  P  I  F  N  K  F  F  F  L  V  K  S  Q  </second_frame>
            <third_frame>   I  I  M  *  K  T  S  E  S  T  L  I  F  S  S  K  L  N  H  T  I  K  D  M  S  K  S  H  S  *  H  *  K  A  *  K  L  R  S  *  E  Q  Q  E  *  K  L  G  L  T  T  T  *  K  V  V  V  A  M  V  E  A  S  M  A  K  V  T  K  M  L  *  D  Q  V  T  K  *  L  T  L  S  *  N  N  S  L  T  T  F  S  C  H  V  L  V  *  M  I  S  Y  A  P  S  Y  C  L  P  *  C  C  *  N  I  V  D  V  P  P  N  *  *  T  L  L  M  I  S  I  L  P  L  M  I  P  C  P  C  S  L  L  V  V  R  S  Y  S  E  V  S  S  F  N  L  E  P  I  L  K  L  R  E  G  Y  E  F  F  N  Q  S  *  N  F  L  R  I  L  M  *  G  F  E  F  E  T  *  I  *  S  R  S  E  E  Y  *  V  V  P  G  H  F  F  F  M  *  I  S  K  I  E  *  I  L  N  L  K  M  C  Q  S  L  T  N  F  F  F  W  *  N  H  K </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C12HBa0093P12.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="13" PGL_strand="-" PGL_start="49396" PGL_stop="47749"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="49396" e_stop="49308"/>
            <exon e_start="49099" e_stop="49008"/>
            <exon e_start="48704" e_stop="48487"/>
            <exon e_start="48397" e_stop="48208"/>
            <exon e_start="48122" e_stop="47749"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.914" acc_prob="0.994" e_score="0.978"/>
          <exon-intron don_prob="0.997" acc_prob="0.978" e_score="1.000"/>
          <exon-intron don_prob="0.968" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.962" acc_prob="0.997" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.978">
            <gDNA_exon_boundary e_start="49396" e_stop="49308" e_length="89"/>
          </exon>
          <intron i_serial="1" don_prob="0.914" acc_prob="0.994">
            <gDNA_intron_boundary i_start="49307" i_stop="49100" i_length="208"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="49099" e_stop="49008" e_length="92"/>
          </exon>
          <intron i_serial="2" don_prob="0.997" acc_prob="0.978">
            <gDNA_intron_boundary i_start="49007" i_stop="48705" i_length="303"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="48704" e_stop="48487" e_length="218"/>
          </exon>
          <intron i_serial="3" don_prob="0.968" acc_prob="0.999">
            <gDNA_intron_boundary i_start="48486" i_stop="48398" i_length="89"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="48397" e_stop="48208" e_length="190"/>
          </exon>
          <intron i_serial="4" don_prob="0.962" acc_prob="0.997">
            <gDNA_intron_boundary i_start="48207" i_stop="48123" i_length="85"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="48122" e_stop="47749" e_length="374"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="49396" stop="49308"/>
              <exon start="49099" stop="49008"/>
              <exon start="48704" stop="48487"/>
              <exon start="48397" stop="48208"/>
              <exon start="48122" stop="47983"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E697566" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="48499" stop="48487"/>
              <exon start="48397" stop="48208"/>
              <exon start="48122" stop="47749"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E734068" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CAAAAAGCTCCAAAGGTATCAGATGGAGAGGATACATACGTTCAGGAAATGTTTTTGAAAGGGACAAAATACTACCTTTACGTTCACAG : CTATTTGCACTATGGCTTACTAGCAGCTCGAGCTGAGATCTTGAAGGTTTCTGGTGAATCTGGAAGTCCTTGCATCTTGGGAGGCCACCACG : GGACATACAAGTATGGAGGAGCAGTTTACCCAGCATCGGCCACGTCTCAAGGTTCAAGCATGAGTACTTGTAGGGAGGTAGCTCTAAAGGCTCTGAAAATTAATGAACCAGCATGTACCCACATGAAGTGTACCTTTGGTGGCGTGTGGAATGGTGGAGGAGGAGATGGACAGAAGAATATGTTTGTTGCTTCGTTTTTCTTTGACAGAGCTGCTGAG : GCTGGTATTATAAATCCAAGTTTAGCTGTTGCAAAAGTTCGCCCAGCTGATTACGAAAGTGCAGCTAATCGTGCTTGTGCAACTGGACTTGAGGGTGCGAAATCTGAATTTCCTCGTGTAGAAGCTGATAACTTGCCATACCTATGCATGGATCTCGTCTATCAATACACTCTACTTGTAGATGGATTCG : GACTTGAACCTCATCAAGAAATGACATTGGTGAAAAAAGTTGAATACAAGAATTCCTTTGTTGAAGCAGCATGGCCATTAGGCAGTGCCATTGAAGTTGCATCATCATTGAGTTAAACTTAACTGGGAAATGGAAAGGATAGGTTCCATTCATGCAATTTTGGGTTTTAATAGTTTATGTATTTTTGACTTGCAGCTTCTGATAAGCCTATTAGGTTAATGTTCTGAAGCAGAAGGGATTGCCATAGTCCATAGCAGGTTGAGATTCTTTATTTTTCCCTTTTTTATTAAAAGGGAATCAAGAATAGTGATAAATCTGTTTGTAATCATGTATTATGAGAATTATGCACTATTTAAATGAGATCAATTTTTGAT</gDNA_template>
            <first_frame> Q  K  A  P  K  V  S  D  G  E  D  T  Y  V  Q  E  M  F  L  K  G  T  K  Y  Y  L  Y  V  H  S :   Y  L  H  Y  G  L  L  A  A  R  A  E  I  L  K  V  S  G  E  S  G  S  P  C  I  L  G  G  H  H   : G  T  Y  K  Y  G  G  A  V  Y  P  A  S  A  T  S  Q  G  S  S  M  S  T  C  R  E  V  A  L  K  A  L  K  I  N  E  P  A  C  T  H  M  K  C  T  F  G  G  V  W  N  G  G  G  G  D  G  Q  K  N  M  F  V  A  S  F  F  F  D  R  A  A  E  :  A  G  I  I  N  P  S  L  A  V  A  K  V  R  P  A  D  Y  E  S  A  A  N  R  A  C  A  T  G  L  E  G  A  K  S  E  F  P  R  V  E  A  D  N  L  P  Y  L  C  M  D  L  V  Y  Q  Y  T  L  L  V  D  G  F   : G  L  E  P  H  Q  E  M  T  L  V  K  K  V  E  Y  K  N  S  F  V  E  A  A  W  P  L  G  S  A  I  E  V  A  S  S  L  S  *  T  *  L  G  N  G  K  D  R  F  H  S  C  N  F  G  F  *  *  F  M  Y  F  *  L  A  A  S  D  K  P  I  R  L  M  F  *  S  R  R  D  C  H  S  P  *  Q  V  E  I  L  Y  F  S  L  F  Y  *  K  G  I  K  N  S  D  K  S  V  C  N  H  V  L  *  E  L  C  T  I  *  M  R  S  I  F  D </first_frame>
            <second_frame>  K  K  L  Q  R  Y  Q  M  E  R  I  H  T  F  R  K  C  F  *  K  G  Q  N  T  T  F  T  F  T   : A  I  C  T  M  A  Y  *  Q  L  E  L  R  S  *  R  F  L  V  N  L  E  V  L  A  S  W  E  A  T  T  :  G  H  T  S  M  E  E  Q  F  T  Q  H  R  P  R  L  K  V  Q  A  *  V  L  V  G  R  *  L  *  R  L  *  K  L  M  N  Q  H  V  P  T  *  S  V  P  L  V  A  C  G  M  V  E  E  E  M  D  R  R  I  C  L  L  L  R  F  S  L  T  E  L  L  R :   L  V  L  *  I  Q  V  *  L  L  Q  K  F  A  Q  L  I  T  K  V  Q  L  I  V  L  V  Q  L  D  L  R  V  R  N  L  N  F  L  V  *  K  L  I  T  C  H  T  Y  A  W  I  S  S  I  N  T  L  Y  L  *  M  D  S  :  D  L  N  L  I  K  K  *  H  W  *  K  K  L  N  T  R  I  P  L  L  K  Q  H  G  H  *  A  V  P  L  K  L  H  H  H  *  V  K  L  N  W  E  M  E  R  I  G  S  I  H  A  I  L  G  F  N  S  L  C  I  F  D  L  Q  L  L  I  S  L  L  G  *  C  S  E  A  E  G  I  A  I  V  H  S  R  L  R  F  F  I  F  P  F  F  I  K  R  E  S  R  I  V  I  N  L  F  V  I  M  Y  Y  E  N  Y  A  L  F  K  *  D  Q  F  L   </second_frame>
            <third_frame>   K  S  S  K  G  I  R  W  R  G  Y  I  R  S  G  N  V  F  E  R  D  K  I  L  P  L  R  S  Q  :  L  F  A  L  W  L  T  S  S  S  S  *  D  L  E  G  F  W  *  I  W  K  S  L  H  L  G  R  P  P  R :   D  I  Q  V  W  R  S  S  L  P  S  I  G  H  V  S  R  F  K  H  E  Y  L  *  G  G  S  S  K  G  S  E  N  *  *  T  S  M  Y  P  H  E  V  Y  L  W  W  R  V  E  W  W  R  R  R  W  T  E  E  Y  V  C  C  F  V  F  L  *  Q  S  C  *   : G  W  Y  Y  K  S  K  F  S  C  C  K  S  S  P  S  *  L  R  K  C  S  *  S  C  L  C  N  W  T  *  G  C  E  I  *  I  S  S  C  R  S  *  *  L  A  I  P  M  H  G  S  R  L  S  I  H  S  T  C  R  W  I  R :   T  *  T  S  S  R  N  D  I  G  E  K  S  *  I  Q  E  F  L  C  *  S  S  M  A  I  R  Q  C  H  *  S  C  I  I  I  E  L  N  L  T  G  K  W  K  G  *  V  P  F  M  Q  F  W  V  L  I  V  Y  V  F  L  T  C  S  F  *  *  A  Y  *  V  N  V  L  K  Q  K  G  L  P  *  S  I  A  G  *  D  S  L  F  F  P  F  L  L  K  G  N  Q  E  *  *  *  I  C  L  *  S  C  I  M  R  I  M  H  Y  L  N  E  I  N  F  *  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0093P12.2" strand="-"/>
                <serials PGL_serial="13" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="49396" stop="49308"/>
                    <exon start="49099" stop="49008"/>
                    <exon start="48704" stop="48487"/>
                    <exon start="48397" stop="48208"/>
                    <exon start="48122" stop="48007"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>702</number_coding_nucleotides>
                  <number_encoded_amino_acids>234</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QKAPKVSDGEDTYVQEMFLKGTKYYLYVHSYLHYGLLAARAEILKVSGESGSPCILGGHHGTYKYGGAVYPASATSQGSSMSTCREVALKALKINEPACTHMKCTFGGVWNGGGGDGQKNMFVASFFFDRAAEAGIINPSLAVAKVRPADYESAANRACATGLEGAKSEFPRVEADNLPYLCMDLVYQYTLLVDGFGLEPHQEMTLVKKVEYKNSFVEAAWPLGSAIEVASSLS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="14" PGL_strand="-" PGL_start="52580" PGL_stop="51152"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="52580" e_stop="52077"/>
            <exon e_start="51588" e_stop="51460"/>
            <exon e_start="51366" e_stop="51310"/>
            <exon e_start="51188" e_stop="51152"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.951" e_score="0.988"/>
          <exon-intron don_prob="0.860" acc_prob="0.515" e_score="0.977"/>
          <exon-intron don_prob="0.997" acc_prob="0.997" e_score="0.982"/>
          <exon-only e_score="0.892"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.988">
            <gDNA_exon_boundary e_start="52580" e_stop="52077" e_length="504"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.951">
            <gDNA_intron_boundary i_start="52076" i_stop="51589" i_length="488"/>
          </intron>
          <exon e_serial="2" e_score="0.977">
            <gDNA_exon_boundary e_start="51588" e_stop="51460" e_length="129"/>
          </exon>
          <intron i_serial="2" don_prob="0.860" acc_prob="0.515">
            <gDNA_intron_boundary i_start="51459" i_stop="51367" i_length="93"/>
          </intron>
          <exon e_serial="3" e_score="0.982">
            <gDNA_exon_boundary e_start="51366" e_stop="51310" e_length="57"/>
          </exon>
          <intron i_serial="3" don_prob="0.997" acc_prob="0.997">
            <gDNA_intron_boundary i_start="51309" i_stop="51189" i_length="121"/>
          </intron>
          <exon e_serial="4" e_score="0.892">
            <gDNA_exon_boundary e_start="51188" e_stop="51152" e_length="37"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52580" stop="52087"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E570147" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52574" stop="52077"/>
              <exon start="51588" stop="51460"/>
              <exon start="51366" stop="51310"/>
              <exon start="51188" stop="51152"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E419693" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52574" stop="52091"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E444624" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTTTTCATTTGCTTATCCTTCCGGTAGTCTCTGATCGGCGGCAGCATTTGTGATCCAGAGACCTAAAAGGACGGTGAAGAATTCGAGCTGGAGACCCAGGATACTCCGGCGCCGGGAAACGGCAAGATCCGATACCGATCACCTTCAGCAGCCGAGCTTTTAGAGGCACAGCTCGATCCACTTCAAATGGAGAAGACAATGAAGCGAAACAACAGACAGTATGGTGGTGAGTCATTCACCGATAAGATCCAGAGGTATAAAGGTGTGATCCTTGTGATTTGCGTTCCGTTGTTTCTCGTTTCTCTAGTGCTTTATGTAATGCCGACGCGTTATCCGTCTGATTCGATGGAGTCGTTAAACCGGAAATTCTCTCCGAATCTCGGATCTATGAAATATGCGGTTATATTTGATGCTGGAAGTTCGGGTAGTAGAGTTCATGTCTTCTGTTTTGATGAGAATTTGGATCTTGTTCCCATTGGCAATGAACTCGAACTTTTCGTGCAG : AAAAAACCAGGTCTGAGTTCATTTGCTAGTGATCCTGTGGCTGCTGCCGATTCTCTTCTACCACTTCTAAAGGACGCAGAGAATGTAGTTCCACGCAATTTGCGCAGTAATACACCAGTGAGAGTTGGG : GCCACTGCAGGTTTGAGGCAGTTGGAAGGTGATGCATCTGACAGGATTCTTCAAGCG : GTGAGGGATTTCCTGAAGAGCAAAAGCAGCTTCAAAG</gDNA_template>
            <first_frame> F  F  I  C  L  S  F  R  *  S  L  I  G  G  S  I  C  D  P  E  T  *  K  D  G  E  E  F  E  L  E  T  Q  D  T  P  A  P  G  N  G  K  I  R  Y  R  S  P  S  A  A  E  L  L  E  A  Q  L  D  P  L  Q  M  E  K  T  M  K  R  N  N  R  Q  Y  G  G  E  S  F  T  D  K  I  Q  R  Y  K  G  V  I  L  V  I  C  V  P  L  F  L  V  S  L  V  L  Y  V  M  P  T  R  Y  P  S  D  S  M  E  S  L  N  R  K  F  S  P  N  L  G  S  M  K  Y  A  V  I  F  D  A  G  S  S  G  S  R  V  H  V  F  C  F  D  E  N  L  D  L  V  P  I  G  N  E  L  E  L  F  V  Q  :  K  K  P  G  L  S  S  F  A  S  D  P  V  A  A  A  D  S  L  L  P  L  L  K  D  A  E  N  V  V  P  R  N  L  R  S  N  T  P  V  R  V  G  :  A  T  A  G  L  R  Q  L  E  G  D  A  S  D  R  I  L  Q  A  :  V  R  D  F  L  K  S  K  S  S  F  K  </first_frame>
            <second_frame>  F  S  F  A  Y  P  S  G  S  L  *  S  A  A  A  F  V  I  Q  R  P  K  R  T  V  K  N  S  S  W  R  P  R  I  L  R  R  R  E  T  A  R  S  D  T  D  H  L  Q  Q  P  S  F  *  R  H  S  S  I  H  F  K  W  R  R  Q  *  S  E  T  T  D  S  M  V  V  S  H  S  P  I  R  S  R  G  I  K  V  *  S  L  *  F  A  F  R  C  F  S  F  L  *  C  F  M  *  C  R  R  V  I  R  L  I  R  W  S  R  *  T  G  N  S  L  R  I  S  D  L  *  N  M  R  L  Y  L  M  L  E  V  R  V  V  E  F  M  S  S  V  L  M  R  I  W  I  L  F  P  L  A  M  N  S  N  F  S  C  R :   K  N  Q  V  *  V  H  L  L  V  I  L  W  L  L  P  I  L  F  Y  H  F  *  R  T  Q  R  M  *  F  H  A  I  C  A  V  I  H  Q  *  E  L  G :   P  L  Q  V  *  G  S  W  K  V  M  H  L  T  G  F  F  K  R :   *  G  I  S  *  R  A  K  A  A  S  K </second_frame>
            <third_frame>   F  H  L  L  I  L  P  V  V  S  D  R  R  Q  H  L  *  S  R  D  L  K  G  R  *  R  I  R  A  G  D  P  G  Y  S  G  A  G  K  R  Q  D  P  I  P  I  T  F  S  S  R  A  F  R  G  T  A  R  S  T  S  N  G  E  D  N  E  A  K  Q  Q  T  V  W  W  *  V  I  H  R  *  D  P  E  V  *  R  C  D  P  C  D  L  R  S  V  V  S  R  F  S  S  A  L  C  N  A  D  A  L  S  V  *  F  D  G  V  V  K  P  E  I  L  S  E  S  R  I  Y  E  I  C  G  Y  I  *  C  W  K  F  G  *  *  S  S  C  L  L  F  *  *  E  F  G  S  C  S  H  W  Q  *  T  R  T  F  R  A   : E  K  T  R  S  E  F  I  C  *  *  S  C  G  C  C  R  F  S  S  T  T  S  K  G  R  R  E  C  S  S  T  Q  F  A  Q  *  Y  T  S  E  S  W   : G  H  C  R  F  E  A  V  G  R  *  C  I  *  Q  D  S  S  S   : G  E  G  F  P  E  E  Q  K  Q  L  Q   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0093P12.2" strand="-"/>
                <serials PGL_serial="14" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="52514" stop="52077"/>
                    <exon start="51588" stop="51460"/>
                    <exon start="51366" stop="51310"/>
                    <exon start="51188" stop="51153"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>660</number_coding_nucleotides>
                  <number_encoded_amino_acids>220</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KDGEEFELETQDTPAPGNGKIRYRSPSAAELLEAQLDPLQMEKTMKRNNRQYGGESFTDKIQRYKGVILVICVPLFLVSLVLYVMPTRYPSDSMESLNRKFSPNLGSMKYAVIFDAGSSGSRVHVFCFDENLDLVPIGNELELFVQKKPGLSSFASDPVAAADSLLPLLKDAENVVPRNLRSNTPVRVGATAGLRQLEGDASDRILQAVRDFLKSKSSFK</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="15" PGL_strand="+" PGL_start="54600" PGL_stop="55447"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="54600" e_stop="55447"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="54600" e_stop="55447" e_length="848"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54600" stop="55447"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E739073" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54600" stop="55414"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E736673" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54647" stop="55377"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E343651" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CTCTAATGCATCCAACTCCTTTTTCCTCCCAAAAATCACTCACAATAATGGCTTTACAACAACCATTTCTATCTGAATTACTACTCCACTCATCTTCAATTAGAACAACACTCCCCAAAAGTTCACTTTTTTCTCTACAAATACCTCAAAGATTCAATCTTTATCTTCAAAATAAGCAAATCAAGAAACAAGGAACAAGTTGTTATGCAATTGCTGAGAATCTTGAAGCTGAGGATCAAAGTTTGATTTTGGAAAATTCAAGTTTAGATGAGTTGAGGGGACAAAGGGAAATTGTTGGTTATGATTGGACTGAAGAATGGTATCCTTTGTATTTAACCAAGAATGTACCTAATGATGCACCTTTAGGTCTTACTGTCTTTGATAAACAAGTTGTTTTGTATAAAGATGGAAGTGGTGAACTTAGATGCTTTGAAGATAGATGTCCACATAGGTAAAAAGAACATACTATATATGTTTGTGTTTTCATTGTCTCAGTTCAGTGTACAAAGCATCTCGATATAAATAGTACTAATTAAACGTATAGGTCACACAGAGATAACTTTGTTTGTTCAAGAACTTAGTATTTTAGCATGATCTTGTTATGCATAGACATTTCTTTTTTACTTGTTCCTTATGTAGTTAAGTGATAGCTAATACATTATGTAGTTGCTTAATTTCTCTTGATTAGCTAAAATCTATGTTTCGTGTAAGGGACAAGTACAAGAAGGGAAGTAGGAAGAATCGATTTGTAGCAACTACGATTTGAGTTACTAGTCGTTGGAAAGTCTCACAAGACGGATGAGCTCCGTTTTTTTTCATCATACTATGGTGGAAAAACATCTGTTTTT</gDNA_template>
            <first_frame> L  *  C  I  Q  L  L  F  P  P  K  N  H  S  Q  *  W  L  Y  N  N  H  F  Y  L  N  Y  Y  S  T  H  L  Q  L  E  Q  H  S  P  K  V  H  F  F  L  Y  K  Y  L  K  D  S  I  F  I  F  K  I  S  K  S  R  N  K  E  Q  V  V  M  Q  L  L  R  I  L  K  L  R  I  K  V  *  F  W  K  I  Q  V  *  M  S  *  G  D  K  G  K  L  L  V  M  I  G  L  K  N  G  I  L  C  I  *  P  R  M  Y  L  M  M  H  L  *  V  L  L  S  L  I  N  K  L  F  C  I  K  M  E  V  V  N  L  D  A  L  K  I  D  V  H  I  G  K  K  N  I  L  Y  M  F  V  F  S  L  S  Q  F  S  V  Q  S  I  S  I  *  I  V  L  I  K  R  I  G  H  T  E  I  T  L  F  V  Q  E  L  S  I  L  A  *  S  C  Y  A  *  T  F  L  F  Y  L  F  L  M  *  L  S  D  S  *  Y  I  M  *  L  L  N  F  S  *  L  A  K  I  Y  V  S  C  K  G  Q  V  Q  E  G  K  *  E  E  S  I  C  S  N  Y  D  L  S  Y  *  S  L  E  S  L  T  R  R  M  S  S  V  F  F  H  H  T  M  V  E  K  H  L  F   </first_frame>
            <second_frame>  S  N  A  S  N  S  F  F  L  P  K  I  T  H  N  N  G  F  T  T  T  I  S  I  *  I  T  T  P  L  I  F  N  *  N  N  T  P  Q  K  F  T  F  F  S  T  N  T  S  K  I  Q  S  L  S  S  K  *  A  N  Q  E  T  R  N  K  L  L  C  N  C  *  E  S  *  S  *  G  S  K  F  D  F  G  K  F  K  F  R  *  V  E  G  T  K  G  N  C  W  L  *  L  D  *  R  M  V  S  F  V  F  N  Q  E  C  T  *  *  C  T  F  R  S  Y  C  L  *  *  T  S  C  F  V  *  R  W  K  W  *  T  *  M  L  *  R  *  M  S  T  *  V  K  R  T  Y  Y  I  C  L  C  F  H  C  L  S  S  V  Y  K  A  S  R  Y  K  *  Y  *  L  N  V  *  V  T  Q  R  *  L  C  L  F  K  N  L  V  F  *  H  D  L  V  M  H  R  H  F  F  F  T  C  S  L  C  S  *  V  I  A  N  T  L  C  S  C  L  I  S  L  D  *  L  K  S  M  F  R  V  R  D  K  Y  K  K  G  S  R  K  N  R  F  V  A  T  T  I  *  V  T  S  R  W  K  V  S  Q  D  G  *  A  P  F  F  F  I  I  L  W  W  K  N  I  C  F  </second_frame>
            <third_frame>   L  M  H  P  T  P  F  S  S  Q  K  S  L  T  I  M  A  L  Q  Q  P  F  L  S  E  L  L  L  H  S  S  S  I  R  T  T  L  P  K  S  S  L  F  S  L  Q  I  P  Q  R  F  N  L  Y  L  Q  N  K  Q  I  K  K  Q  G  T  S  C  Y  A  I  A  E  N  L  E  A  E  D  Q  S  L  I  L  E  N  S  S  L  D  E  L  R  G  Q  R  E  I  V  G  Y  D  W  T  E  E  W  Y  P  L  Y  L  T  K  N  V  P  N  D  A  P  L  G  L  T  V  F  D  K  Q  V  V  L  Y  K  D  G  S  G  E  L  R  C  F  E  D  R  C  P  H  R  *  K  E  H  T  I  Y  V  C  V  F  I  V  S  V  Q  C  T  K  H  L  D  I  N  S  T  N  *  T  Y  R  S  H  R  D  N  F  V  C  S  R  T  *  Y  F  S  M  I  L  L  C  I  D  I  S  F  L  L  V  P  Y  V  V  K  *  *  L  I  H  Y  V  V  A  *  F  L  L  I  S  *  N  L  C  F  V  *  G  T  S  T  R  R  E  V  G  R  I  D  L  *  Q  L  R  F  E  L  L  V  V  G  K  S  H  K  T  D  E  L  R  F  F  S  S  Y  Y  G  G  K  T  S  V  F </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0093P12.2" strand="+"/>
                <serials PGL_serial="15" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="54602" stop="55054"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>450</number_coding_nucleotides>
                  <number_encoded_amino_acids>150</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LMHPTPFSSQKSLTIMALQQPFLSELLLHSSSIRTTLPKSSLFSLQIPQRFNLYLQNKQIKKQGTSCYAIAENLEAEDQSLILENSSLDELRGQREIVGYDWTEEWYPLYLTKNVPNDAPLGLTVFDKQVVLYKDGSGELRCFEDRCPHR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 146 chains have been computed
$ 
$ memory statistics:
$ 145824 bytes spliced alignments in total
$ 72 spliced alignments have been stored
$ 2025 bytes was the average size of a spliced alignment
$ 23864 bytes predicted gene locations in total
$ 15 predicted gene locations have been stored
$ 1590 bytes was the average size of a predicted gene location
$ 0 megabytes was the average size of the backtrace matrix
$ 157 backtrace matrices have been allocated
$ 
$ date finished: 2008-04-10 00:09:41
-->
