psLayout version 3 match mis- rep. N's Q gap Q gap T gap T gap strand Q Q Q Q T T T T block blockSizes qStarts tStarts match match count bases count bases name size start end name size start end count --------------------------------------------------------------------------------------------------------------------------------------------------------------- 654 29 0 0 3 6 6 1114 + SGN-E687822 754 28 717 C00HBa0008K08.1 90402 33791 35588 9 67,16,89,57,65,99,105,93,92, 28,97,113,205,262,328,427,532,625, 33791,33858,33875,33964,34185,34348,34599,34881,35496, 32 1 0 0 0 0 0 0 + SGN-E207638 525 282 315 C00HBa0008K08.1 90402 90215 90248 1 33, 282, 90215, 32 1 0 0 0 0 0 0 + SGN-E210313 579 244 277 C00HBa0008K08.1 90402 90215 90248 1 33, 244, 90215, 32 1 0 0 0 0 0 0 + SGN-E210350 606 244 277 C00HBa0008K08.1 90402 90215 90248 1 33, 244, 90215, 32 1 0 0 0 0 0 0 + SGN-E210521 528 245 278 C00HBa0008K08.1 90402 90215 90248 1 33, 245, 90215, 581 0 0 0 0 0 1 244 + SGN-E202259 581 0 581 C00HBa0008K08.1 90402 60018 60843 2 353,228, 0,353, 60018,60615, 32 1 0 0 0 0 0 0 + SGN-E212483 352 269 302 C00HBa0008K08.1 90402 90215 90248 1 33, 269, 90215, 32 1 0 0 0 0 0 0 + SGN-E215058 662 262 295 C00HBa0008K08.1 90402 90215 90248 1 33, 262, 90215, 32 1 0 0 0 0 0 0 + SGN-E215096 662 262 295 C00HBa0008K08.1 90402 90215 90248 1 33, 262, 90215, 32 1 0 0 0 0 0 0 + SGN-E214609 587 346 379 C00HBa0008K08.1 90402 90215 90248 1 33, 346, 90215, 32 1 0 0 0 0 0 0 + SGN-E214081 697 183 216 C00HBa0008K08.1 90402 90215 90248 1 33, 183, 90215, 32 1 0 0 0 0 0 0 + SGN-E213995 455 179 212 C00HBa0008K08.1 90402 90215 90248 1 33, 179, 90215, 32 1 0 0 0 0 0 0 + SGN-E372623 650 527 560 C00HBa0008K08.1 90402 90215 90248 1 33, 527, 90215, 32 1 0 0 0 0 0 0 + SGN-E373903 647 527 560 C00HBa0008K08.1 90402 90215 90248 1 33, 527, 90215, 32 1 0 0 0 0 0 0 + SGN-E377946 633 176 209 C00HBa0008K08.1 90402 90215 90248 1 33, 176, 90215, 91 5 0 0 1 45 1 45 + SGN-E389654 590 437 578 C00HBa0008K08.1 90402 75287 75428 2 67,29, 437,549, 75287,75399, 32 1 0 0 0 0 0 0 + SGN-E390977 696 284 317 C00HBa0008K08.1 90402 90215 90248 1 33, 284, 90215, 157 11 0 0 1 3 2 882 + SGN-E394131 504 316 487 C00HBa0008K08.1 90402 28903 29953 3 43,85,40, 316,359,447, 28903,29747,29913, 32 1 0 0 0 0 0 0 + SGN-E395774 655 245 278 C00HBa0008K08.1 90402 90215 90248 1 33, 245, 90215, 183 4 0 0 0 0 1 1 + SGN-E539292 674 398 585 C00HBa0008K08.1 90402 75287 75475 2 182,5, 398,580, 75287,75470, 155 9 0 0 1 1 0 0 - SGN-E543884 813 596 761 C00HBa0008K08.1 90402 12237 12401 2 17,147, 52,70, 12237,12254, 32 1 0 0 0 0 0 0 + SGN-E242562 629 309 342 C00HBa0008K08.1 90402 90215 90248 1 33, 309, 90215, 32 1 0 0 0 0 0 0 + SGN-E233286 504 176 209 C00HBa0008K08.1 90402 90215 90248 1 33, 176, 90215, 854 5 0 0 2 3 7 5103 + SGN-E729946 862 0 862 C00HBa0008K08.1 90402 64366 70328 10 78,29,54,77,101,71,63,45,324,17, 0,78,108,162,239,340,411,474,519,845, 64366,64446,64475,64663,65338,68046,69404,69795,69987,70311, 667 1 0 0 0 0 7 7319 + SGN-E698349 673 5 673 C00HBa0008K08.1 90402 40023 48010 8 41,117,33,87,63,117,93,117, 5,46,163,196,283,346,463,556, 40023,40711,40914,41080,41244,42398,46024,47893, 731 2 0 0 0 0 0 0 - SGN-E707182 743 10 743 C00HBa0008K08.1 90402 14085 14818 1 733, 0, 14085, 32 1 0 0 0 0 0 0 + SGN-E709907 798 277 310 C00HBa0008K08.1 90402 90215 90248 1 33, 277, 90215, 154 4 0 0 2 3 1 1 + SGN-E243215 460 80 241 C00HBa0008K08.1 90402 89132 89291 4 90,49,12,7, 80,170,220,234, 89132,89223,89272,89284, 157 5 0 0 1 4 4 6 - SGN-E243215 460 74 240 C00HBa0008K08.1 90402 27866 28034 5 10,56,13,57,26, 220,234,290,303,360, 27866,27879,27936,27950,28008, 32 1 0 0 0 0 0 0 + SGN-E246823 598 124 157 C00HBa0008K08.1 90402 90215 90248 1 33, 124, 90215, 572 0 0 0 0 0 5 3783 + SGN-E249802 572 0 572 C00HBa0008K08.1 90402 34146 38501 6 102,102,105,93,89,81, 0,102,204,309,402,491, 34146,34345,34599,34881,35496,38420, 32 1 0 0 0 0 0 0 + SGN-E248724 625 308 341 C00HBa0008K08.1 90402 90215 90248 1 33, 308, 90215, 632 0 0 0 0 0 6 5115 + SGN-E252285 632 0 632 C00HBa0008K08.1 90402 35528 41275 7 57,220,87,117,33,87,31, 0,57,277,364,481,514,601, 35528,38420,39977,40711,40914,41080,41244, 576 30 0 0 2 2 5 3688 + SGN-E265693 628 1 609 C00HBa0008K08.1 90402 34348 38642 7 99,105,93,89,121,4,95, 1,100,205,298,387,509,514, 34348,34599,34881,35496,38420,38543,38547, 486 8 0 0 0 0 4 1989 - SGN-E265725 494 0 494 C00HBa0008K08.1 90402 18550 21033 5 48,111,71,78,186, 0,48,159,230,308, 18550,18683,18901,19055,20847, 420 13 0 0 1 25 2 3508 - SGN-E268612 458 0 458 C00HBa0008K08.1 90402 9208 13149 3 50,225,158, 0,50,300, 9208,10478,12991, 515 26 0 0 0 0 4 3686 + SGN-E266187 542 1 542 C00HBa0008K08.1 90402 34348 38575 5 99,105,93,89,155, 1,100,205,298,387, 34348,34599,34881,35496,38420, 53 3 0 0 0 0 0 0 - SGN-E217989 317 240 296 C00HBa0008K08.1 90402 89212 89268 1 56, 21, 89212, 53 3 0 0 0 0 0 0 - SGN-E218065 317 240 296 C00HBa0008K08.1 90402 89212 89268 1 56, 21, 89212, 32 1 0 0 0 0 0 0 + SGN-E270725 567 285 318 C00HBa0008K08.1 90402 90215 90248 1 33, 285, 90215, 110 5 0 0 0 0 0 0 + SGN-E284025 513 398 513 C00HBa0008K08.1 90402 75287 75402 1 115, 398, 75287, 32 1 0 0 0 0 0 0 + SGN-E281744 475 192 225 C00HBa0008K08.1 90402 90215 90248 1 33, 192, 90215, 32 1 0 0 0 0 0 0 + SGN-E285334 562 242 275 C00HBa0008K08.1 90402 90215 90248 1 33, 242, 90215, 32 1 0 0 0 0 0 0 + SGN-E278048 585 283 316 C00HBa0008K08.1 90402 90215 90248 1 33, 283, 90215, 32 1 0 0 0 0 0 0 + SGN-E281923 410 281 314 C00HBa0008K08.1 90402 90215 90248 1 33, 281, 90215, 32 1 0 0 0 0 0 0 + SGN-E304933 568 285 318 C00HBa0008K08.1 90402 90215 90248 1 33, 285, 90215, 322 2 0 0 0 0 0 0 - SGN-E329574 371 47 371 C00HBa0008K08.1 90402 14607 14931 1 324, 0, 14607, 529 3 0 0 3 3 8 2283 + SGN-E333894 539 0 535 C00HBa0008K08.1 90402 38493 41308 11 147,87,112,38,45,11,19,5,5,18,45, 0,147,234,347,385,431,442,462,467,472,490, 38493,39977,40711,40909,41080,41125,41137,41156,41162,41244,41263, 514 0 0 0 0 0 5 2749 + SGN-E331331 524 0 514 C00HBa0008K08.1 90402 28834 32097 6 112,84,102,45,75,96, 0,112,196,298,343,418, 28834,29747,29909,31641,31802,32001, 567 26 0 0 3 6 5 592 + SGN-E327185 671 25 624 C00HBa0008K08.1 90402 33791 34976 8 67,16,89,57,65,99,105,95, 25,94,110,202,259,325,424,529, 33791,33858,33875,33964,34185,34348,34599,34881, 556 0 0 0 0 0 0 0 + SGN-E336128 563 0 556 C00HBa0008K08.1 90402 3512 4068 1 556, 0, 3512, 759 0 0 0 1 1 6 4119 + SGN-E342186 760 0 760 C00HBa0008K08.1 90402 28825 33703 8 121,264,45,75,96,78,38,42, 0,121,385,430,505,601,679,718, 28825,29747,31641,31802,32001,32604,33623,33661, 688 0 0 1 0 0 3 3748 + SGN-E341998 689 0 689 C00HBa0008K08.1 90402 70584 75021 4 482,104,42,61, 0,482,586,628, 70584,71150,71335,74960, 430 11 0 0 1 4 1 5 + SGN-E696088 881 412 857 C00HBa0008K08.1 90402 80747 81193 2 420,21, 412,836, 80747,81172, 46 1 0 0 0 0 0 0 + SGN-E692248 851 804 851 C00HBa0008K08.1 90402 80747 80794 1 47, 804, 80747,