psLayout version 3 match mis- rep. N's Q gap Q gap T gap T gap strand Q Q Q Q T T T T block blockSizes qStarts tStarts match match count bases count bases name size start end name size start end count --------------------------------------------------------------------------------------------------------------------------------------------------------------- 35 0 0 0 1 1 1 24 + SGN-E555405 749 303 339 C00HBa0255N21.2 108986 63744 63803 2 18,17, 303,322, 63744,63786, 49 1 0 0 0 0 2 413 + SGN-E553197 553 446 496 C00HBa0255N21.2 108986 63744 64207 3 18,13,19, 446,464,477, 63744,63786,64188, 259 16 0 0 2 15 3 38 + SGN-E204223 580 290 580 C00HBa0255N21.2 108986 62705 63018 5 20,24,169,27,35, 290,310,334,505,545, 62705,62734,62786,62955,62983, 38 1 0 0 0 0 0 0 + SGN-E204092 457 414 453 C00HBa0255N21.2 108986 62707 62746 1 39, 414, 62707, 39 1 0 0 0 0 1 364 + SGN-E577899 392 0 40 C00HBa0255N21.2 108986 62414 62818 2 8,32, 0,8, 62414,62786, 97 4 0 0 0 0 0 0 - SGN-E577960 387 286 387 C00HBa0255N21.2 108986 62993 63094 1 101, 0, 62993, 232 20 0 0 0 0 0 0 + SGN-E578392 506 254 506 C00HBa0255N21.2 108986 62705 62957 1 252, 254, 62705, 36 1 0 0 0 0 0 0 + SGN-E375052 649 608 645 C00HBa0255N21.2 108986 62709 62746 1 37, 608, 62709, 32 1 0 0 0 0 0 0 + SGN-E375053 640 607 640 C00HBa0255N21.2 108986 62709 62742 1 33, 607, 62709, 225 15 0 0 1 2 2 37 + SGN-E374844 554 290 532 C00HBa0255N21.2 108986 62705 62982 4 20,24,169,27, 290,310,334,505, 62705,62734,62786,62955, 103 3 0 0 1 1 0 0 - SGN-E376754 662 535 642 C00HBa0255N21.2 108986 62988 63094 2 66,40, 20,87, 62988,63054, 215 11 0 0 2 15 1 1 + SGN-E377238 484 1 242 C00HBa0255N21.2 108986 62855 63082 3 100,27,99, 1,103,143, 62855,62955,62983, 64 2 0 0 0 0 1 21 - SGN-E377316 765 674 740 C00HBa0255N21.2 108986 63007 63094 2 39,27, 25,64, 63007,63067, 67 5 0 0 0 0 0 0 + SGN-E391901 346 266 338 C00HBa0255N21.2 108986 62708 62780 1 72, 266, 62708, 38 1 0 0 0 0 0 0 + SGN-E394807 217 175 214 C00HBa0255N21.2 108986 62707 62746 1 39, 175, 62707, 39 0 0 0 0 0 0 0 + SGN-E398336 459 416 455 C00HBa0255N21.2 108986 62707 62746 1 39, 416, 62707, 52 1 0 0 1 1 0 0 + SGN-E547334 453 378 432 C00HBa0255N21.2 108986 62705 62758 2 49,4, 378,428, 62705,62754, 52 1 0 0 1 1 0 0 + SGN-E547335 453 378 432 C00HBa0255N21.2 108986 62705 62758 2 49,4, 378,428, 62705,62754, 215 11 0 0 2 15 1 1 + SGN-E233594 310 1 242 C00HBa0255N21.2 108986 62855 63082 3 100,27,99, 1,103,143, 62855,62955,62983, 215 11 0 0 2 15 1 1 + SGN-E233735 514 1 242 C00HBa0255N21.2 108986 62855 63082 3 100,27,99, 1,103,143, 62855,62955,62983, 215 11 0 0 2 15 1 1 + SGN-E237992 666 0 241 C00HBa0255N21.2 108986 62855 63082 3 100,27,99, 0,102,142, 62855,62955,62983, 36 1 0 0 0 0 0 0 + SGN-E227060 564 523 560 C00HBa0255N21.2 108986 62709 62746 1 37, 523, 62709, 79 6 0 0 0 0 0 0 - SGN-E240526 430 345 430 C00HBa0255N21.2 108986 63005 63090 1 85, 0, 63005, 215 11 0 0 2 15 1 1 + SGN-E240879 434 1 242 C00HBa0255N21.2 108986 62855 63082 3 100,27,99, 1,103,143, 62855,62955,62983, 215 11 0 0 2 15 1 1 + SGN-E242674 528 1 242 C00HBa0255N21.2 108986 62855 63082 3 100,27,99, 1,103,143, 62855,62955,62983, 215 11 0 0 2 15 1 1 + SGN-E233074 643 1 242 C00HBa0255N21.2 108986 62855 63082 3 100,27,99, 1,103,143, 62855,62955,62983, 43 0 0 0 0 0 0 0 + SGN-E719799 683 556 599 C00HBa0255N21.2 108986 62707 62750 1 43, 556, 62707, 39 0 0 0 0 0 0 0 + SGN-E721929 648 556 595 C00HBa0255N21.2 108986 62707 62746 1 39, 556, 62707, 379 0 0 0 0 0 1 390 - SGN-E735749 392 0 379 C00HBa0255N21.2 108986 56199 56968 2 374,5, 13,387, 56199,56963, 754 4 0 0 1 1 4 4463 - SGN-E736542 775 6 765 C00HBa0255N21.2 108986 58873 64094 6 178,76,57,167,134,146, 10,188,264,321,488,623, 58873,60581,60924,62232,63814,63948, 829 4 0 0 0 0 4 4463 - SGN-E738800 833 0 833 C00HBa0255N21.2 108986 58814 64110 5 237,76,57,167,296, 0,237,313,370,537, 58814,60581,60924,62232,63814, 771 4 0 0 0 0 1 1 - SGN-E699636 783 8 783 C00HBa0255N21.2 108986 57282 58058 2 48,727, 0,48, 57282,57331, 556 10 0 0 1 2 1 1 - SGN-E699820 574 6 574 C00HBa0255N21.2 108986 57884 58451 2 527,39, 0,529, 57884,58412, 436 2 0 0 0 0 0 0 - SGN-E709808 438 0 438 C00HBa0255N21.2 108986 57396 57834 1 438, 0, 57396, 50 0 0 0 1 13 2 414 + SGN-E712066 674 611 674 C00HBa0255N21.2 108986 63744 64208 3 18,12,20, 611,629,654, 63744,63786,64188, 224 14 0 0 2 21 2 26 - SGN-E249253 618 359 618 C00HBa0255N21.2 108986 62830 63094 3 125,7,106, 0,132,153, 62830,62975,62988, 277 19 0 0 2 21 2 26 - SGN-E253695 540 223 540 C00HBa0255N21.2 108986 62772 63094 3 183,7,106, 0,190,211, 62772,62975,62988, 54 0 0 0 0 0 0 0 + SGN-E256217 514 0 54 C00HBa0255N21.2 108986 63040 63094 1 54, 0, 63040, 76 2 0 0 1 63 1 21 - SGN-E217478 385 222 363 C00HBa0255N21.2 108986 62995 63094 3 13,38,27, 22,98,136, 62995,63008,63067, 76 2 0 0 1 63 1 21 - SGN-E228654 468 305 446 C00HBa0255N21.2 108986 62995 63094 3 13,38,27, 22,98,136, 62995,63008,63067, 81 2 0 0 1 44 2 23 - SGN-E229134 397 234 361 C00HBa0255N21.2 108986 62988 63094 3 17,39,27, 36,97,136, 62988,63007,63067, 41 0 0 0 0 0 0 0 + SGN-E233998 377 319 360 C00HBa0255N21.2 108986 62709 62750 1 41, 319, 62709, 39 0 0 0 0 0 0 0 + SGN-E234253 351 293 332 C00HBa0255N21.2 108986 62709 62748 1 39, 293, 62709, 45 1 0 0 1 1 1 2 + SGN-E334299 683 239 286 C00HBa0255N21.2 108986 106258 106306 2 13,33, 239,253, 106258,106273, 45 1 0 0 1 1 1 2 + SGN-E334110 565 235 282 C00HBa0255N21.2 108986 106258 106306 2 13,33, 235,249, 106258,106273, 650 2 0 0 1 2 1 1 - SGN-E314183 654 0 654 C00HBa0255N21.2 108986 56514 57167 3 25,234,393, 0,25,261, 56514,56540,56774, 389 0 0 0 0 0 0 0 - SGN-E340641 423 0 389 C00HBa0255N21.2 108986 56148 56537 1 389, 34, 56148, 51 2 0 0 0 0 0 0 + SGN-E362032 430 377 430 C00HBa0255N21.2 108986 62705 62758 1 53, 377, 62705,