psLayout version 3 match mis- rep. N's Q gap Q gap T gap T gap strand Q Q Q Q T T T T block blockSizes qStarts tStarts match match count bases count bases name size start end name size start end count --------------------------------------------------------------------------------------------------------------------------------------------------------------- 1226 1 0 0 0 0 8 2322 - SGN-E744601 1241 14 1241 C00SLm0024O10.1 137358 89218 92767 9 239,122,130,114,95,92,111,145,179, 0,239,361,491,605,700,792,903,1048, 89218,89538,89811,90363,90561,90747,90923,91164,92588, 714 0 0 0 0 0 5 1061 - SGN-E687822 754 3 717 C00SLm0024O10.1 137358 68965 70740 6 92,93,105,102,63,259, 37,129,222,327,429,492, 68965,69594,69797,70070,70253,70481, 736 3 0 1 0 0 4 365 - SGN-E689358 740 0 740 C00SLm0024O10.1 137358 129993 131098 5 36,38,336,155,175, 0,36,74,410,565, 129993,130030,130069,130679,130923, 33 0 0 0 0 0 0 0 - SGN-E201479 637 14 47 C00SLm0024O10.1 137358 59036 59069 1 33, 590, 59036, 33 0 0 0 0 0 0 0 - SGN-E214472 574 27 60 C00SLm0024O10.1 137358 59036 59069 1 33, 514, 59036, 32 2 0 0 0 0 0 0 + SGN-E578017 542 44 78 C00SLm0024O10.1 137358 8609 8643 1 34, 44, 8609, 37 1 0 0 0 0 0 0 + SGN-E578123 684 74 112 C00SLm0024O10.1 137358 37134 37172 1 38, 74, 37134, 644 2 0 0 0 0 0 0 + SGN-E556203 737 91 737 C00SLm0024O10.1 137358 17395 18041 1 646, 91, 17395, 584 6 0 0 0 0 1 415 + SGN-E369111 614 0 590 C00SLm0024O10.1 137358 23489 24494 2 85,505, 0,85, 23489,23989, 586 4 0 0 0 0 2 2808 + SGN-E369112 590 0 590 C00SLm0024O10.1 137358 11990 15388 3 185,332,73, 0,185,517, 11990,12274,15315, 489 32 0 0 3 21 0 0 - SGN-E374009 697 148 690 C00SLm0024O10.1 137358 44528 45049 4 12,62,58,389, 7,22,99,160, 44528,44540,44602,44660, 394 1 0 0 0 0 0 0 - SGN-E394130 409 0 395 C00SLm0024O10.1 137358 62733 63128 1 395, 14, 62733, 501 3 0 0 0 0 2 5214 - SGN-E394131 504 0 504 C00SLm0024O10.1 137358 74449 80167 3 61,84,359, 0,61,145, 74449,74594,79808, 589 2 0 0 3 3 1 415 + SGN-E394967 594 0 594 C00SLm0024O10.1 137358 23325 24331 5 249,241,51,4,46, 0,249,491,543,548, 23325,23989,24230,24281,24285, 264 4 0 0 1 1 0 0 - SGN-E397127 269 0 269 C00SLm0024O10.1 137358 131917 132185 2 113,155, 0,114, 131917,132030, 594 13 0 0 0 0 0 0 - SGN-E397218 630 0 607 C00SLm0024O10.1 137358 129332 129939 1 607, 23, 129332, 718 2 0 0 0 0 1 189 - SGN-E397321 720 0 720 C00SLm0024O10.1 137358 129119 130028 2 8,712, 0,8, 129119,129316, 119 5 0 0 0 0 0 0 + SGN-E397322 557 433 557 C00SLm0024O10.1 137358 131722 131846 1 124, 433, 131722, 463 0 0 0 0 0 0 0 - SGN-E397322 557 0 463 C00SLm0024O10.1 137358 131722 132185 1 463, 94, 131722, 243 0 0 0 0 0 0 0 - SGN-E397446 243 0 243 C00SLm0024O10.1 137358 131942 132185 1 243, 0, 131942, 622 1 0 0 0 0 1 189 - SGN-E398730 623 0 623 C00SLm0024O10.1 137358 129119 129931 2 8,615, 0,8, 129119,129316, 133 8 0 0 0 0 2 2 + SGN-E545742 817 663 804 C00SLm0024O10.1 137358 18554 18697 3 29,39,73, 663,692,731, 18554,18584,18624, 116 4 0 0 0 0 1 1 + SGN-E545742 817 684 804 C00SLm0024O10.1 137358 22773 22894 2 12,108, 684,696, 22773,22786, 500 0 0 0 0 0 2 1324 - SGN-E235821 508 8 508 C00SLm0024O10.1 137358 63328 65152 3 192,88,220, 0,192,280, 63328,63654,64932, 788 1 0 0 0 0 6 7056 - SGN-E719677 818 29 818 C00SLm0024O10.1 137358 72332 80177 7 115,75,45,102,84,362,6, 0,115,190,235,337,421,783, 72332,72565,72757,74408,74594,79808,80171, 34 1 0 0 0 0 0 0 + SGN-E736441 262 98 133 C00SLm0024O10.1 137358 59030 59065 1 35, 98, 59030, 34 1 0 0 0 0 0 0 + SGN-E739261 262 98 133 C00SLm0024O10.1 137358 59030 59065 1 35, 98, 59030, 34 1 0 0 0 0 0 0 + SGN-E740257 262 98 133 C00SLm0024O10.1 137358 59030 59065 1 35, 98, 59030, 41 0 0 0 0 0 0 0 - SGN-E698349 673 5 46 C00SLm0024O10.1 137358 63654 63695 1 41, 627, 63654, 858 0 0 0 0 0 2 5407 + SGN-E699849 858 0 858 C00SLm0024O10.1 137358 18282 24547 3 33,267,558, 0,33,300, 18282,23307,23989, 932 2 0 0 0 0 1 415 + SGN-E701018 934 0 934 C00SLm0024O10.1 137358 23341 24690 2 233,701, 0,233, 23341,23989, 830 3 0 0 0 0 4 3924 + SGN-E701704 833 0 833 C00SLm0024O10.1 137358 12504 17261 5 102,124,159,405,43, 0,102,226,385,790, 12504,15315,15524,16812,17218, 31 0 0 0 0 0 0 0 - SGN-E702432 847 156 187 C00SLm0024O10.1 137358 59035 59066 1 31, 660, 59035, 811 3 0 0 0 0 3 3923 + SGN-E703519 814 0 814 C00SLm0024O10.1 137358 12434 17171 4 172,124,159,359, 0,172,296,455, 12434,15315,15524,16812, 757 3 0 0 0 0 2 5407 + SGN-E704949 760 0 760 C00SLm0024O10.1 137358 17865 24032 3 450,267,43, 0,450,717, 17865,23307,23989, 881 1 0 1 0 0 3 5408 + SGN-E707731 884 1 884 C00SLm0024O10.1 137358 17961 24252 4 354,267,181,81, 1,355,622,803, 17961,23307,23989,24171, 31 0 0 0 0 0 0 0 - SGN-E707841 857 116 147 C00SLm0024O10.1 137358 59035 59066 1 31, 710, 59035, 527 0 0 0 0 0 0 0 + SGN-E244238 527 0 527 C00SLm0024O10.1 137358 17081 17608 1 527, 0, 17081, 540 0 0 0 0 0 0 0 + SGN-E244298 547 0 540 C00SLm0024O10.1 137358 24102 24642 1 540, 0, 24102, 454 0 0 0 0 0 1 99 + SGN-E246289 454 0 454 C00SLm0024O10.1 137358 11990 12543 2 185,269, 0,185, 11990,12274, 661 0 0 0 0 0 0 0 + SGN-E248090 661 0 661 C00SLm0024O10.1 137358 17081 17742 1 661, 0, 17081, 628 3 0 0 0 0 1 415 + SGN-E249579 631 0 631 C00SLm0024O10.1 137358 23326 24372 2 248,383, 0,248, 23326,23989, 516 19 0 0 2 2 5 4713 - SGN-E249802 572 30 567 C00SLm0024O10.1 137358 65076 70324 7 76,89,93,105,99,68,5, 5,81,170,263,368,468,537, 65076,68968,69594,69797,70070,70251,70319, 442 0 0 0 0 0 0 0 + SGN-E249945 500 0 442 C00SLm0024O10.1 137358 24087 24529 1 442, 0, 24087, 343 19 0 0 1 2 5 5009 - SGN-E252285 632 0 364 C00SLm0024O10.1 137358 63654 69025 6 53,34,93,4,121,57, 268,321,355,448,454,575, 63654,63708,64932,65026,65031,68968, 378 1 0 0 0 0 0 0 + SGN-E252657 379 0 379 C00SLm0024O10.1 137358 17422 17801 1 379, 0, 17422, 471 27 0 0 2 2 2 92 + SGN-E261046 588 88 588 C00SLm0024O10.1 137358 103268 103858 4 438,11,7,42, 88,526,538,546, 103268,103795,103806,103816, 737 1 0 1 1 1 3 3923 + SGN-E263582 740 0 740 C00SLm0024O10.1 137358 12518 17180 5 88,124,159,325,43, 0,88,212,371,697, 12518,15315,15524,16812,17137, 786 1 0 0 0 0 2 2 + SGN-E261101 787 0 787 C00SLm0024O10.1 137358 16988 17777 3 730,32,25, 0,730,762, 16988,17719,17752, 258 0 0 0 0 0 0 0 + SGN-E264225 258 0 258 C00SLm0024O10.1 137358 16992 17250 1 258, 0, 16992, 627 1 0 0 0 0 5 5001 - SGN-E265693 628 0 628 C00SLm0024O10.1 137358 64541 70170 6 21,220,89,93,105,100, 0,21,241,330,423,528, 64541,64932,68968,69594,69797,70070, 540 2 0 0 0 0 4 4631 - SGN-E266187 542 0 542 C00SLm0024O10.1 137358 64997 70170 5 155,89,93,105,100, 0,155,244,337,442, 64997,68968,69594,69797,70070, 385 0 0 0 1 2 1 2 - SGN-E219021 393 0 387 C00SLm0024O10.1 137358 129542 129929 3 8,6,371, 6,16,22, 129542,129550,129558, 371 3 0 0 0 0 1 154 - SGN-E219450 374 0 374 C00SLm0024O10.1 137358 129377 129905 2 11,363, 0,11, 129377,129542, 433 0 0 0 0 0 0 0 + SGN-E218013 456 0 433 C00SLm0024O10.1 137358 24307 24740 1 433, 0, 24307, 395 0 0 0 0 0 1 1 + SGN-E218089 413 0 395 C00SLm0024O10.1 137358 24349 24745 2 42,353, 0,42, 24349,24392, 237 1 0 0 0 0 0 0 + SGN-E217874 256 0 238 C00SLm0024O10.1 137358 24507 24745 1 238, 0, 24507, 439 0 0 0 0 0 0 0 + SGN-E218230 457 0 439 C00SLm0024O10.1 137358 24306 24745 1 439, 0, 24306, 116 3 0 0 2 73 2 87 - SGN-E230552 384 20 212 C00SLm0024O10.1 137358 134719 134925 3 70,28,21, 172,282,343, 134719,134799,134904, 33 0 0 0 0 0 0 0 - SGN-E269713 427 51 84 C00SLm0024O10.1 137358 59036 59069 1 33, 343, 59036, 32 0 0 0 0 0 0 0 + SGN-E272596 477 391 423 C00SLm0024O10.1 137358 59028 59060 1 32, 391, 59028, 32 0 0 0 0 0 0 0 + SGN-E273284 599 567 599 C00SLm0024O10.1 137358 59030 59062 1 32, 567, 59030, 464 0 0 0 0 0 0 0 + SGN-E279726 464 0 464 C00SLm0024O10.1 137358 17802 18266 1 464, 0, 17802, 533 0 0 0 0 0 1 1129 + SGN-E293047 533 0 533 C00SLm0024O10.1 137358 15532 17194 2 151,382, 0,151, 15532,16812, 346 0 0 0 0 0 2 5214 - SGN-E330878 346 0 346 C00SLm0024O10.1 137358 74460 80020 3 50,84,212, 0,50,134, 74460,74594,79808, 747 5 0 0 0 0 2 363 - SGN-E332865 752 0 752 C00SLm0024O10.1 137358 129982 131097 3 423,155,174, 0,423,578, 129982,130679,130923, 655 2 0 1 0 0 0 0 - SGN-E334568 658 0 658 C00SLm0024O10.1 137358 131515 132173 1 658, 0, 131515, 511 1 0 0 0 0 0 0 - SGN-E334650 512 0 512 C00SLm0024O10.1 137358 131661 132173 1 512, 0, 131661, 216 16 0 0 1 2 4 1193 - SGN-E333894 539 0 234 C00SLm0024O10.1 137358 63654 65079 5 55,32,93,4,48, 305,360,392,485,491, 63654,63710,64932,65026,65031, 693 0 0 0 0 0 0 0 + SGN-E333991 693 0 693 C00SLm0024O10.1 137358 17434 18127 1 693, 0, 17434, 31 0 0 0 0 0 0 0 - SGN-E329586 564 145 176 C00SLm0024O10.1 137358 59035 59066 1 31, 388, 59035, 544 0 0 0 0 0 5 7060 - SGN-E329746 544 0 544 C00SLm0024O10.1 137358 72616 80220 6 24,45,102,84,124,165, 0,24,69,171,255,379, 72616,72757,74408,74594,79808,80055, 542 2 0 0 0 0 2 5214 - SGN-E330382 568 0 544 C00SLm0024O10.1 137358 74408 80166 3 102,84,358, 24,126,210, 74408,74594,79808, 528 6 0 0 0 0 0 0 - SGN-E330095 534 0 534 C00SLm0024O10.1 137358 131650 132184 1 534, 0, 131650, 547 0 0 0 0 0 2 363 - SGN-E330652 547 0 547 C00SLm0024O10.1 137358 130111 131021 3 294,155,98, 0,294,449, 130111,130679,130923, 454 15 0 0 0 0 0 0 - SGN-E330789 469 0 469 C00SLm0024O10.1 137358 70964 71433 1 469, 0, 70964, 376 29 0 0 1 1 5 1926 - SGN-E331331 524 108 514 C00SLm0024O10.1 137358 72351 74682 6 96,74,36,9,102,88, 10,106,181,217,226,328, 72351,72565,72757,73986,74408,74594, 668 0 0 0 1 3 7 1064 - SGN-E327185 671 0 671 C00SLm0024O10.1 137358 69008 70740 8 21,7,18,93,105,102,63,259, 0,21,31,49,142,247,349,412, 69008,69030,69039,69594,69797,70070,70253,70481, 665 1 0 1 0 0 5 1668 - SGN-E315132 667 0 667 C00SLm0024O10.1 137358 90412 92747 6 65,95,92,111,145,159, 0,65,160,252,363,508, 90412,90561,90747,90923,91164,92588, 597 39 0 1 5 6 8 3243 - SGN-E342186 760 117 760 C00SLm0024O10.1 137358 70802 74682 12 11,5,26,36,78,96,74,36,9,123,4,139, 0,11,18,45,81,159,255,330,366,375,499,504, 70802,70815,70820,70846,71745,72351,72565,72757,73986,74408,74539,74543, 33 0 0 0 0 0 0 0 - SGN-E343781 628 19 52 C00SLm0024O10.1 137358 59036 59069 1 33, 576, 59036, 38 0 0 0 1 2 1 4 - SGN-E353354 573 153 193 C00SLm0024O10.1 137358 114469 114511 2 19,19, 380,401, 114469,114492, 545 15 0 0 1 10 2 18 - SGN-E362393 584 0 570 C00SLm0024O10.1 137358 131630 132208 3 9,511,40, 14,33,544, 131630,131652,132168, 388 6 0 0 0 0 1 5 - SGN-E361902 394 0 394 C00SLm0024O10.1 137358 131779 132178 2 384,10, 0,384, 131779,132168, 504 11 0 0 1 54 1 1 - SGN-E360157 569 0 569 C00SLm0024O10.1 137358 131654 132170 3 17,494,4, 0,71,565, 131654,131671,132166, 397 7 0 0 2 2 1 5 - SGN-E364550 406 0 406 C00SLm0024O10.1 137358 131780 132189 4 29,68,286,21, 0,30,99,385, 131780,131809,131877,132168, 291 5 0 0 1 1 1 1 - SGN-E363118 302 5 302 C00SLm0024O10.1 137358 131873 132170 3 288,4,4, 0,289,293, 131873,132161,132166, 408 3 0 0 0 0 0 0 + SGN-E364251 429 18 429 C00SLm0024O10.1 137358 129504 129915 1 411, 18, 129504, 449 15 0 0 0 0 0 0 - SGN-E364418 464 0 464 C00SLm0024O10.1 137358 131161 131625 1 464, 0, 131161, 441 7 0 0 0 0 1 5 - SGN-E363813 448 0 448 C00SLm0024O10.1 137358 131735 132188 2 428,20, 0,428, 131735,132168, 411 6 0 0 0 0 1 5 - SGN-E363798 417 0 417 C00SLm0024O10.1 137358 131778 132200 2 385,32, 0,385, 131778,132168, 517 3 0 0 0 0 0 0 + SGN-E363531 538 18 538 C00SLm0024O10.1 137358 129504 130024 1 520, 18, 129504, 387 5 0 0 0 0 2 280 - SGN-E361568 392 0 392 C00SLm0024O10.1 137358 131536 132208 3 7,339,46, 0,7,346, 131536,131819,132162, 40 1 0 0 1 6 0 0 - SGN-E691253 822 195 242 C00SLm0024O10.1 137358 59025 59066 2 12,29, 580,598, 59025,59037, 40 1 0 0 1 6 0 0 - SGN-E691254 828 191 238 C00SLm0024O10.1 137358 59025 59066 2 12,29, 590,608, 59025,59037, 127 8 0 0 1 5 1 4 + SGN-E358624 494 225 365 C00SLm0024O10.1 137358 120387 120526 2 101,34, 225,331, 120387,120492,