psLayout version 3 match mis- rep. N's Q gap Q gap T gap T gap strand Q Q Q Q T T T T block blockSizes qStarts tStarts match match count bases count bases name size start end name size start end count --------------------------------------------------------------------------------------------------------------------------------------------------------------- 33 2 0 0 0 0 0 0 + SGN-U563121 2786 973 1008 C00SLm0030C09.1 174507 135024 135059 1 35, 973, 135024, 42 0 0 0 0 0 1 5 - SGN-U564484 690 0 42 C00SLm0030C09.1 174507 145074 145121 2 6,36, 648,654, 145074,145085, 666 2 0 0 0 0 2 3431 + SGN-U565634 733 1 669 C00SLm0030C09.1 174507 169301 173400 3 282,204,182, 1,283,487, 169301,172941,173218, 30 0 0 0 0 0 0 0 - SGN-U566074 801 362 392 C00SLm0030C09.1 174507 16101 16131 1 30, 409, 16101, 34 1 0 0 0 0 0 0 - SGN-U566075 1120 722 757 C00SLm0030C09.1 174507 16099 16134 1 35, 363, 16099, 501 0 0 0 0 0 0 0 + SGN-U566140 685 0 501 C00SLm0030C09.1 174507 62156 62657 1 501, 0, 62156, 708 1 0 0 0 0 0 0 - SGN-U566142 970 0 709 C00SLm0030C09.1 174507 62983 63692 1 709, 261, 62983, 1003 0 0 0 0 0 4 5199 - SGN-U567094 1006 0 1003 C00SLm0030C09.1 174507 104877 111079 5 294,114,168,231,196, 3,297,411,579,810, 104877,106337,107057,108409,110883, 1166 0 0 0 0 0 5 5210 - SGN-U569345 1166 0 1166 C00SLm0030C09.1 174507 48806 55182 6 51,60,110,183,220,542, 0,51,111,221,404,624, 48806,49838,51057,52755,53042,54640, 629 0 0 0 1 1 0 0 - SGN-U569416 630 0 630 C00SLm0030C09.1 174507 44497 45126 2 101,528, 0,102, 44497,44598, 42 2 0 0 0 0 0 0 + SGN-U571037 1519 124 168 C00SLm0030C09.1 174507 121311 121355 1 44, 124, 121311, 72 3 0 0 0 0 0 0 + SGN-U571451 2102 2027 2102 C00SLm0030C09.1 174507 98704 98779 1 75, 2027, 98704, 797 0 0 0 0 0 4 3020 + SGN-U571855 797 0 797 C00SLm0030C09.1 174507 3492 7309 5 31,371,237,144,14, 0,31,402,639,783, 3492,4670,5615,7150,7295, 37 0 0 0 0 0 0 0 - SGN-U572650 745 56 93 C00SLm0030C09.1 174507 145083 145120 1 37, 652, 145083, 51 4 0 0 0 0 0 0 + SGN-U572890 489 9 64 C00SLm0030C09.1 174507 134079 134134 1 55, 9, 134079, 238 16 0 0 0 0 1 76 - SGN-U573027 596 185 439 C00SLm0030C09.1 174507 90345 90675 2 224,30, 157,381, 90345,90645, 64 0 0 0 1 2 0 0 + SGN-U573297 1336 520 586 C00SLm0030C09.1 174507 15425 15489 2 58,6, 520,580, 15425,15483, 967 0 0 0 0 0 0 0 - SGN-U573485 968 1 968 C00SLm0030C09.1 174507 20526 21493 1 967, 0, 20526, 53 4 0 0 0 0 0 0 + SGN-U573509 1309 41 98 C00SLm0030C09.1 174507 134082 134139 1 57, 41, 134082, 35 0 0 0 0 0 0 0 + SGN-U573932 585 126 161 C00SLm0030C09.1 174507 6950 6985 1 35, 126, 6950, 223 4 0 0 0 0 0 0 - SGN-U575090 1052 376 603 C00SLm0030C09.1 174507 77271 77498 1 227, 449, 77271, 136 5 0 0 0 0 0 0 + SGN-U576618 1122 314 455 C00SLm0030C09.1 174507 77131 77272 1 141, 314, 77131, 97 1 0 0 0 0 0 0 - SGN-U576618 1122 581 679 C00SLm0030C09.1 174507 77673 77771 1 98, 443, 77673, 1085 1 0 0 0 0 2 887 + SGN-U577090 1086 0 1086 C00SLm0030C09.1 174507 69614 71587 3 185,894,7, 0,185,1079, 69614,70235,71580, 167 0 0 0 0 0 0 0 + SGN-U579198 931 0 167 C00SLm0030C09.1 174507 112003 112170 1 167, 0, 112003, 49 4 0 0 0 0 0 0 + SGN-U579678 433 29 82 C00SLm0030C09.1 174507 134082 134135 1 53, 29, 134082, 42 1 0 0 1 1 1 9 - SGN-U579764 886 39 83 C00SLm0030C09.1 174507 134082 134134 2 20,23, 803,824, 134082,134111, 438 1 0 0 1 717 2 1340 - SGN-U580332 1295 139 1295 C00SLm0030C09.1 174507 16661 18440 3 171,202,66, 0,171,1090, 16661,17455,18374, 50 4 0 0 0 0 0 0 + SGN-U580552 809 43 97 C00SLm0030C09.1 174507 134079 134133 1 54, 43, 134079, 1040 15 0 0 2 33 3 1906 - SGN-U581324 1627 526 1614 C00SLm0030C09.1 174507 111983 114944 5 69,887,5,74,20, 13,82,999,1007,1081, 111983,112060,114761,114766,114924, 43 3 0 0 0 0 0 0 + SGN-U581432 1832 487 533 C00SLm0030C09.1 174507 134082 134128 1 46, 487, 134082, 58 3 0 0 0 0 0 0 + SGN-U583115 472 379 440 C00SLm0030C09.1 174507 86195 86256 1 61, 379, 86195, 34 1 0 0 0 0 0 0 + SGN-U583176 720 112 147 C00SLm0030C09.1 174507 16099 16134 1 35, 112, 16099, 170 1 0 0 0 0 1 8003 + SGN-U583646 1369 63 234 C00SLm0030C09.1 174507 86669 94843 2 68,103, 63,131, 86669,94740, 1002 4 0 0 1 1 1 108 - SGN-U583646 1369 362 1369 C00SLm0030C09.1 174507 93262 94376 3 190,564,252, 0,190,755, 93262,93560,94124, 179 11 0 0 0 0 1 1 + SGN-U583647 735 545 735 C00SLm0030C09.1 174507 86541 86732 2 177,13, 545,722, 86541,86719, 919 2 0 0 0 0 1 252 - SGN-U585477 929 2 923 C00SLm0030C09.1 174507 40951 42124 2 478,443, 6,484, 40951,41681, 154 4 0 2 0 0 1 104 - SGN-U586432 706 16 176 C00SLm0030C09.1 174507 77588 77852 2 88,72, 530,618, 77588,77780, 31 0 0 0 0 0 0 0 + SGN-U587232 426 150 181 C00SLm0030C09.1 174507 24393 24424 1 31, 150, 24393, 64 0 0 0 1 2 0 0 - SGN-U587432 606 199 265 C00SLm0030C09.1 174507 15425 15489 2 58,6, 341,401, 15425,15483, 119 8 0 0 1 4 1 109 - SGN-U588034 793 147 278 C00SLm0030C09.1 174507 77615 77851 2 61,66, 515,580, 77615,77785, 156 5 0 5 0 0 1 104 - SGN-U588035 422 145 311 C00SLm0030C09.1 174507 77588 77858 2 88,78, 111,199, 77588,77780, 661 0 0 1 0 0 1 4203 - SGN-U589384 662 0 662 C00SLm0030C09.1 174507 42089 46954 2 501,161, 0,501, 42089,46793, 663 1 0 0 0 0 2 3848 - SGN-U589385 665 1 665 C00SLm0030C09.1 174507 44110 48622 3 320,293,51, 0,320,613, 44110,46793,48571, 707 1 0 1 0 0 4 3850 - SGN-U589386 710 1 710 C00SLm0030C09.1 174507 44063 48622 5 7,59,299,293,51, 0,7,66,365,658, 44063,44071,44131,46793,48571, 46 3 0 0 0 0 0 0 + SGN-U589876 223 43 92 C00SLm0030C09.1 174507 134082 134131 1 49, 43, 134082, 30 0 0 0 0 0 0 0 - SGN-U590089 396 177 207 C00SLm0030C09.1 174507 16104 16134 1 30, 189, 16104, 33 0 0 0 0 0 0 0 + SGN-U590678 344 107 140 C00SLm0030C09.1 174507 16101 16134 1 33, 107, 16101, 637 0 0 0 0 0 0 0 - SGN-U590954 637 0 637 C00SLm0030C09.1 174507 16563 17200 1 637, 0, 16563, 152 7 0 0 0 0 1 2 + SGN-U591120 461 76 235 C00SLm0030C09.1 174507 2509 2670 2 32,127, 76,108, 2509,2543, 95 5 0 0 1 1 1 1 + SGN-U591120 461 134 235 C00SLm0030C09.1 174507 33412 33513 3 12,24,64, 134,147,171, 33412,33424,33449, 507 3 0 0 0 0 3 2700 - SGN-U591300 511 1 511 C00SLm0030C09.1 174507 112907 116117 4 31,74,133,272, 0,31,105,238, 112907,114766,114924,115845, 409 2 0 0 0 0 3 819 + SGN-U591789 416 5 416 C00SLm0030C09.1 174507 114766 115996 4 74,133,53,151, 5,79,212,265, 114766,114924,115228,115845, 38 3 0 0 0 0 0 0 - SGN-U592336 560 427 468 C00SLm0030C09.1 174507 134082 134123 1 41, 92, 134082, 607 0 0 0 0 0 0 0 - SGN-U592503 607 0 607 C00SLm0030C09.1 174507 112726 113333 1 607, 0, 112726, 37 0 0 0 0 0 0 0 - SGN-U592650 517 40 77 C00SLm0030C09.1 174507 145083 145120 1 37, 440, 145083, 42 0 0 0 0 0 1 5 + SGN-U593669 156 107 149 C00SLm0030C09.1 174507 145074 145121 2 6,36, 107,113, 145074,145085, 226 8 0 0 0 0 0 0 - SGN-U594172 283 0 234 C00SLm0030C09.1 174507 70894 71128 1 234, 49, 70894, 611 1 0 0 1 1 0 0 - SGN-U596495 613 0 613 C00SLm0030C09.1 174507 106388 107000 2 55,557, 0,56, 106388,106443, 713 5 0 0 0 0 2 91 + SGN-U597101 725 1 719 C00SLm0030C09.1 174507 61227 62036 3 608,75,35, 1,609,684, 61227,61925,62001, 476 15 0 0 2 2 2 1943 + SGN-U597102 509 15 508 C00SLm0030C09.1 174507 59772 62206 3 34,176,281, 15,50,227, 59772,61658,61925, 48 4 0 0 0 0 0 0 + SGN-U597291 486 18 70 C00SLm0030C09.1 174507 134082 134134 1 52, 18, 134082, 481 29 0 0 0 0 0 0 - SGN-U597708 516 5 515 C00SLm0030C09.1 174507 88942 89452 1 510, 1, 88942, 500 0 0 0 0 0 0 0 + SGN-U598237 500 0 500 C00SLm0030C09.1 174507 2963 3463 1 500, 0, 2963, 30 0 0 0 0 0 0 0 - SGN-U598348 634 555 585 C00SLm0030C09.1 174507 16099 16129 1 30, 49, 16099, 60 3 0 0 1 37 1 27 + SGN-U598393 415 37 137 C00SLm0030C09.1 174507 134082 134172 2 52,11, 37,126, 134082,134161, 35 1 0 0 0 0 0 0 - SGN-U598393 415 58 94 C00SLm0030C09.1 174507 145084 145120 1 36, 321, 145084, 38 2 0 0 0 0 0 0 - SGN-U599546 257 11 51 C00SLm0030C09.1 174507 134094 134134 1 40, 206, 134094, 390 0 0 0 0 0 4 8091 - SGN-U599719 390 0 390 C00SLm0030C09.1 174507 118894 127375 5 125,77,62,75,51, 0,125,202,264,339, 118894,125675,125885,127137,127324, 49 3 0 0 0 0 0 0 + SGN-U600186 451 393 445 C00SLm0030C09.1 174507 134082 134134 1 52, 393, 134082, 49 3 0 0 0 0 0 0 - SGN-U600360 206 11 63 C00SLm0030C09.1 174507 134082 134134 1 52, 143, 134082, 801 0 0 0 0 0 1 1 - SGN-U601469 802 1 802 C00SLm0030C09.1 174507 157437 158239 2 143,658, 0,143, 157437,157581, 38 0 0 0 0 0 0 0 - SGN-U601485 632 589 627 C00SLm0030C09.1 174507 6950 6988 1 38, 5, 6950, 49 3 0 0 0 0 0 0 - SGN-U602033 127 17 69 C00SLm0030C09.1 174507 134082 134134 1 52, 58, 134082, 49 1 0 0 1 5 2 5 - SGN-U602408 727 239 294 C00SLm0030C09.1 174507 9091 9146 3 4,35,11, 433,437,477, 9091,9096,9135, 610 5 0 0 0 0 2 284 - SGN-U602849 624 9 624 C00SLm0030C09.1 174507 91943 92842 3 219,123,273, 0,219,342, 91943,92245,92569, 770 7 0 0 0 0 1 274 - SGN-U603327 777 0 777 C00SLm0030C09.1 174507 29832 30883 2 225,552, 0,225, 29832,30331, 38 0 0 0 1 1 1 2 + SGN-U603837 290 98 137 C00SLm0030C09.1 174507 113814 113854 3 25,7,6, 98,124,131, 113814,113839,113848, 42 3 0 0 0 0 0 0 + SGN-U604691 747 433 478 C00SLm0030C09.1 174507 114467 114512 1 45, 433, 114467,