psLayout version 3 match mis- rep. N's Q gap Q gap T gap T gap strand Q Q Q Q T T T T block blockSizes qStarts tStarts match match count bases count bases name size start end name size start end count --------------------------------------------------------------------------------------------------------------------------------------------------------------- 495 0 0 0 0 0 2 1598 - SGN-U565399 496 1 496 C00SLm0039K13.1 112066 90885 92978 3 209,225,61, 0,209,434, 90885,91868,92917, 38 0 0 0 1 1 1 3 + SGN-U566075 1120 718 757 C00SLm0039K13.1 112066 93364 93405 3 4,18,16, 718,723,741, 93364,93368,93389, 34 0 0 0 0 0 1 3 - SGN-U566191 1303 1057 1091 C00SLm0039K13.1 112066 93366 93403 2 21,13, 212,233, 93366,93390, 623 1 0 0 0 0 1 625 + SGN-U568388 624 0 624 C00SLm0039K13.1 112066 1880 3129 2 159,465, 0,159, 1880,2664, 37 0 0 0 1 1 1 3 + SGN-U569831 1339 1226 1264 C00SLm0039K13.1 112066 93364 93404 3 4,18,15, 1226,1231,1249, 93364,93368,93389, 55 1 0 0 0 0 2 17 + SGN-U570020 718 614 670 C00SLm0039K13.1 112066 31759 31832 3 8,39,9, 614,622,661, 31759,31768,31823, 404 0 0 0 0 0 1 108 + SGN-U571024 405 1 405 C00SLm0039K13.1 112066 6876 7388 2 85,319, 1,86, 6876,7069, 51 0 0 0 1 10 1 11 + SGN-U571674 1361 923 984 C00SLm0039K13.1 112066 37424 37486 2 25,26, 923,958, 37424,37460, 36 1 0 0 0 0 0 0 + SGN-U571763 534 0 37 C00SLm0039K13.1 112066 36436 36473 1 37, 0, 36436, 54 2 0 0 1 30 1 28 - SGN-U571830 919 459 545 C00SLm0039K13.1 112066 86751 86835 2 12,44, 374,416, 86751,86791, 52 2 0 0 1 1 0 0 + SGN-U571831 393 138 193 C00SLm0039K13.1 112066 86750 86804 2 34,20, 138,173, 86750,86784, 37 0 0 0 0 0 0 0 - SGN-U572247 928 389 426 C00SLm0039K13.1 112066 31767 31804 1 37, 502, 31767, 37 0 0 0 0 0 0 0 + SGN-U573941 984 709 746 C00SLm0039K13.1 112066 31767 31804 1 37, 709, 31767, 638 0 0 0 0 0 0 0 + SGN-U576025 895 3 641 C00SLm0039K13.1 112066 15661 16299 1 638, 3, 15661, 203 15 0 0 1 10 1 472 - SGN-U577169 605 377 605 C00SLm0039K13.1 112066 35783 36473 2 105,113, 0,115, 35783,36360, 115 5 0 0 2 2 0 0 + SGN-U577409 1111 989 1111 C00SLm0039K13.1 112066 35603 35723 3 44,69,7, 989,1034,1104, 35603,35647,35716, 246 16 0 0 1 4 1 3 - SGN-U577829 1075 376 642 C00SLm0039K13.1 112066 35623 35888 3 93,39,130, 433,530,569, 35623,35716,35758, 33 0 0 0 0 0 1 3 + SGN-U577890 443 379 412 C00SLm0039K13.1 112066 93374 93410 2 12,21, 379,391, 93374,93389, 88 3 0 0 2 26 4 42 - SGN-U579247 725 550 667 C00SLm0039K13.1 112066 58235 58368 5 9,15,36,6,25, 58,67,88,124,150, 58235,58262,58282,58319,58343, 34 0 0 0 0 0 1 3 + SGN-U579521 646 132 166 C00SLm0039K13.1 112066 93366 93403 2 21,13, 132,153, 93366,93390, 68 1 0 0 1 1 1 22 + SGN-U580300 1821 1737 1807 C00SLm0039K13.1 112066 35603 35694 2 19,50, 1737,1757, 35603,35644, 39 0 0 0 0 0 2 89 + SGN-U581093 1442 1403 1442 C00SLm0039K13.1 112066 93369 93497 3 17,15,7, 1403,1420,1435, 93369,93389,93490, 63 3 0 0 1 1 1 1 - SGN-U581185 1055 988 1055 C00SLm0039K13.1 112066 36400 36467 3 35,4,27, 0,35,40, 36400,36436,36440, 1430 1 0 91 0 0 8 3020 - SGN-U582621 1522 0 1522 C00SLm0039K13.1 112066 84199 88741 9 659,91,130,89,77,69,75,96,236, 0,659,750,880,969,1046,1115,1190,1286, 84199,84942,85611,85971,86177,87206,87676,87869,88505, 944 0 0 0 0 0 8 3488 - SGN-U582622 949 5 949 C00SLm0039K13.1 112066 84248 88680 9 172,66,91,130,89,77,69,75,175, 0,172,238,329,459,548,625,694,769, 84248,84792,84942,85611,85971,86177,87206,87676,88505, 741 2 0 0 1 1 1 952 - SGN-U582623 802 0 744 C00SLm0039K13.1 112066 85572 87267 3 149,533,61, 58,208,741, 85572,85721,87206, 344 20 0 0 4 20 2 14 + SGN-U583599 528 4 388 C00SLm0039K13.1 112066 57245 57623 6 4,17,20,310,9,4, 4,9,40,61,375,384, 57245,57249,57279,57299,57609,57619, 322 20 0 0 3 29 1 11 + SGN-U583599 528 0 371 C00SLm0039K13.1 112066 76951 77304 4 8,16,10,308, 0,9,26,63, 76951,76959,76975,76996, 527 0 0 0 0 0 0 0 - SGN-U583599 528 0 527 C00SLm0039K13.1 112066 50690 51217 1 527, 1, 50690, 346 24 0 0 2 3 4 10 - SGN-U583599 528 35 408 C00SLm0039K13.1 112066 42745 43125 6 4,11,7,322,13,13, 120,124,135,143,467,480, 42745,42750,42765,42776,43098,43112, 327 20 0 0 3 21 3 13917 - SGN-U583599 528 20 388 C00SLm0039K13.1 112066 32428 46692 5 5,11,308,15,8, 140,146,157,473,500, 32428,32433,32445,46665,46684, 41 1 0 0 0 0 0 0 + SGN-U585069 2359 2124 2166 C00SLm0039K13.1 112066 74353 74395 1 42, 2124, 74353, 41 0 0 0 0 0 1 3 - SGN-U585636 686 515 556 C00SLm0039K13.1 112066 93369 93413 2 17,24, 130,147, 93369,93389, 38 3 0 0 0 0 0 0 - SGN-U585958 1534 393 434 C00SLm0039K13.1 112066 48702 48743 1 41, 1100, 48702, 41 0 0 1 0 0 0 0 + SGN-U588418 730 667 709 C00SLm0039K13.1 112066 74353 74395 1 42, 667, 74353, 397 0 0 0 0 0 1 84 - SGN-U589240 620 223 620 C00SLm0039K13.1 112066 84845 85326 2 13,384, 0,13, 84845,84942, 710 1 0 0 2 2 6 2299 - SGN-U589241 713 0 713 C00SLm0039K13.1 112066 84259 87269 9 82,79,2,64,91,130,123,77,63, 0,83,162,165,229,320,450,573,650, 84259,84341,84792,84794,84942,85611,85971,86177,87206, 33 0 0 0 0 0 1 3 + SGN-U590024 588 355 388 C00SLm0039K13.1 112066 93374 93410 2 12,21, 355,367, 93374,93389, 36 0 0 0 0 0 1 3 + SGN-U590678 344 103 139 C00SLm0039K13.1 112066 93368 93407 2 18,18, 103,121, 93368,93389, 54 3 0 0 0 0 0 0 - SGN-U591009 515 0 57 C00SLm0039K13.1 112066 35605 35662 1 57, 458, 35605, 216 12 0 1 2 13 2 476 - SGN-U592488 573 331 573 C00SLm0039K13.1 112066 35767 36472 3 52,65,112, 0,55,130, 35767,35823,36360, 107 6 0 0 0 0 0 0 + SGN-U592600 414 282 395 C00SLm0039K13.1 112066 35603 35716 1 113, 282, 35603, 674 0 0 0 0 0 0 0 + SGN-U594589 674 0 674 C00SLm0039K13.1 112066 73655 74329 1 674, 0, 73655, 392 15 0 0 8 39 4 2338 + SGN-U594589 674 0 446 C00SLm0039K13.1 112066 54882 57627 10 8,18,21,15,9,10,308,7,6,5, 0,8,29,54,70,89,110,420,433,441, 54882,54907,57221,57242,57257,57279,57301,57609,57616,57622, 344 16 0 0 3 30 3 26 + SGN-U594589 674 37 427 C00SLm0039K13.1 112066 54929 55315 5 6,11,8,328,7, 37,43,73,90,420, 54929,54939,54967,54980,55308, 299 18 0 0 1 2 0 0 + SGN-U594589 674 110 429 C00SLm0039K13.1 112066 76996 77313 2 308,9, 110,420, 76996,77304, 514 24 0 0 9 66 9 6358 - SGN-U594589 674 0 604 C00SLm0039K13.1 112066 25946 32842 12 11,14,8,22,15,21,34,16,42,331,6,18, 70,81,98,118,150,179,202,237,255,297,631,656, 25946,25958,25988,26005,29453,29491,29520,29554,29571,32486,32818,32824, 387 19 0 0 5 20 5 8074 - SGN-U594589 674 5 431 C00SLm0039K13.1 112066 42779 51259 9 11,321,16,11,6,5,7,15,14, 243,256,577,593,605,612,617,630,655, 42779,42790,43112,51189,51200,51208,51215,51222,51245, 326 22 0 0 1 2 2 18404 - SGN-U594589 674 83 433 C00SLm0039K13.1 112066 32431 51183 3 12,311,25, 241,255,566, 32431,50845,51158, 34 0 0 0 0 0 1 3 + SGN-U594792 379 131 165 C00SLm0039K13.1 112066 93366 93403 2 21,13, 131,152, 93366,93390, 30 0 0 0 0 0 0 0 + SGN-U595282 746 606 636 C00SLm0039K13.1 112066 17300 17330 1 30, 606, 17300, 692 0 0 0 0 0 0 0 - SGN-U597671 692 0 692 C00SLm0039K13.1 112066 79022 79714 1 692, 0, 79022, 34 0 0 0 0 0 1 3 + SGN-U598348 634 552 586 C00SLm0039K13.1 112066 93369 93406 2 17,17, 552,569, 93369,93389, 37 0 0 0 1 3 1 3 - SGN-U598348 634 544 584 C00SLm0039K13.1 112066 93367 93407 3 20,12,5, 50,70,85, 93367,93390,93402, 53 0 0 0 2 9 3 177 - SGN-U598717 609 115 177 C00SLm0039K13.1 112066 24318 24548 4 19,6,20,8, 432,459,466,486, 24318,24500,24509,24540, 437 8 0 0 0 0 0 0 + SGN-U603567 445 0 445 C00SLm0039K13.1 112066 19425 19870 1 445, 0, 19425,