<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-01-14 00:03:26"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C00HBa0081D06-3cnAc/GenomeThreader_SGN_U_tomato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C00HBa0081D06-3cnAc/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C00HBa0081D06-3cnAc/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U316885" ref_strand="+" ref_description="SGN-U316885        Tomato 200607 #1 [5 ESTs aligned] arabidopsis/peptide: | Symbol: None | coatomer protein complex, subunit beta 2 (beta prime), putative, contains 7 WD-40 repeats (PF00400) (1 weak); similar to Coatomer beta' subunit (Beta'-coat protein) (Beta'-COP) (p102) (SP:P35606) (Homo sapiens); similar to Coatomer beta' subunit (Beta'-coat protein) (Beta'-COP) (p102) (SP:O55029) (Mus musculus) | chr1:30090676-30097131 FORWARD | Aliases: F19K16.4, F19K16_4(evalue: 0, score=815) genbank/nr: gi|30699476|ref|NP_178116.2| coatomer protein complex, subunit beta 2 (beta prime), putative [Arabidopsis thaliana] gi|25312792|pir||C96831 hypothetical protein F18B13.7 [imported] - Arabidopsis thaliana gi|5902363|gb|AAD55465.1| Putative coatomer protein complex, subunit beta 2 (beta prime) [Arabidopsis thaliana] gi|20259354|gb|AAM14001.1| putative coatomer protein complex, subunit beta 2 (beta prime) [Arabidopsis thaliana](evalue: 0, score=815)">
      <seq>ctgatggagaaagattgcctttggcggtcaaggaattgggaacttgtgacctatacccacaaagcttaaagcataaccccaatggaaggtttgttgttgtttgtggagacggtgagtatatcatatatactgctctggcctggagaaataggtcatttggctcagctctggaatttgtttggtcgtctgatggagagtatgctatccgagaaagtacttcaaggattaagattttcagcaaaaatttccaggaaaaaaagagtatccgcccgactttctctgctgagcacatctatgggggtaccttattggcaatgtgctcaaatgatttcatttgcttttacgattggattgagtgcaggttgatacgacgtattgatgttaatgtcaaaaacctctactgggctgacagtggtgatctggtggctattgctagtgatacttcattctacatactgaagtataatcgtgatgttgtctctgcacatttagatagtggaagatctgtagatgaacaaggtgttgaagatgcttttgaacttctttatgagataaatgaacgtgtcagaactggaatttgggtaggagattgtttcatttacaacaattcttcttcgagactgaattactgtgtaggcggcgaggtgaccacaatgtttcacttagaccgacccatgtacctgctgggatatctcgctaatcaaagtagagttttcctgattgacaaagagttcaatgtcgtgggatatactcttctgctcagcttgatagagtacaagacacttgtgatgcgtggtgactgggacagagctaatgcagtcttaccatcaattcctaaggatcaccataacagtgttgctcgtttcttggaatcacggggtatgattgaggaagcattggaagttgcaacagacgctgactacagatttgaacttgccatacagttgggtaaattagaaattgcaaaggaaatcgctgtagtagcacagagtgaatccaaatggaagcagttgggtgaactggcaatgtctgctggaatgctggagatggcagaggattgtttgaaatacgctaatgacttgagtggtttgctgatgctttattcctcgttaggagatgctgaaggaatggctgaattagcatctcttgcaaaagagcatggaagaaacaatgttgcattcctttgcctgttcctcctgggtaaagtggaagattgtgttcagctgttggttgacagcaaccggatacctgaggctgcatttatggcaagatcttaccttccaagtaaggtttctgaaatagttgcaatgtggaggaaggatcttaataaggttaaccagaaagcagcagaagctttggctgatcctgaagaatatcccaacatgtttgagcactggcaaattgcacatgcagttgaagctagagtcgcagaggaaaggggtgtatacccaccagcagcagattatggaaattatgctgatag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C00HBa0081D06-3cnAc/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C00HBa0081D06.1" temp_strand="-" temp_description="C00HBa0081D06.1  AC218144.2 htgs_phase:3 submitted_to_sgn_as:C12HBa0081D06">
        <position start="7781" stop="2366"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="7481" g_stop="7420" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="62" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="7419" i_stop="6912" i_length="508">
            <donor d_prob="0.923" d_score="1.00"/>
            <acceptor a_prob="0.980" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="6911" g_stop="6723" g_length="189"/>
          <reference_exon_boundary r_type="cDNA" r_start="63" r_stop="251" r_length="189" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="6722" i_stop="6383" i_length="340">
            <donor d_prob="0.643" d_score="1.00"/>
            <acceptor a_prob="0.901" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="6382" g_stop="6242" g_length="141"/>
          <reference_exon_boundary r_type="cDNA" r_start="252" r_stop="392" r_length="141" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="6241" i_stop="6145" i_length="97">
            <donor d_prob="0.954" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="6144" g_stop="6070" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="393" r_stop="467" r_length="75" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="6069" i_stop="5980" i_length="90">
            <donor d_prob="0.927" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="5979" g_stop="5803" g_length="177"/>
          <reference_exon_boundary r_type="cDNA" r_start="468" r_stop="644" r_length="177" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="5802" i_stop="5710" i_length="93">
            <donor d_prob="0.952" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="5709" g_stop="5618" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="645" r_stop="736" r_length="92" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="5617" i_stop="5525" i_length="93">
            <donor d_prob="0.955" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="5524" g_stop="5408" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="737" r_stop="853" r_length="117" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="5407" i_stop="4818" i_length="590">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.724" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="4817" g_stop="4703" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="854" r_stop="968" r_length="115" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="4702" i_stop="4583" i_length="120">
            <donor d_prob="0.860" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="4582" g_stop="4511" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="969" r_stop="1040" r_length="72" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="4510" i_stop="4014" i_length="497">
            <donor d_prob="0.890" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="4013" g_stop="3817" g_length="197"/>
          <reference_exon_boundary r_type="cDNA" r_start="1041" r_stop="1237" r_length="197" r_score="1.000"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="3816" i_stop="3724" i_length="93">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="3723" g_stop="3630" g_length="94"/>
          <reference_exon_boundary r_type="cDNA" r_start="1238" r_stop="1331" r_length="94" r_score="1.000"/>
        </exon>
        <intron i_serial="11">
          <gDNA_intron_boundary i_start="3629" i_stop="3070" i_length="560">
            <donor d_prob="0.961" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="12">
          <gDNA_exon_boundary g_start="3069" g_stop="2963" g_length="107"/>
          <reference_exon_boundary r_type="cDNA" r_start="1332" r_stop="1438" r_length="107" r_score="1.000"/>
        </exon>
        <intron i_serial="12">
          <gDNA_intron_boundary i_start="2962" i_stop="2711" i_length="252">
            <donor d_prob="0.898" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="13">
          <gDNA_exon_boundary g_start="2710" g_stop="2666" g_length="45"/>
          <reference_exon_boundary r_type="cDNA" r_start="1439" r_stop="1483" r_length="45" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C00HBa0081D06.1" gen_strand="-" ref_id="SGN-U316885" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>1483</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C00HBa0081D06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U316885" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="7481" e_stop="7420"/>
          <exon e_start="6911" e_stop="6723"/>
          <exon e_start="6382" e_stop="6242"/>
          <exon e_start="6144" e_stop="6070"/>
          <exon e_start="5979" e_stop="5803"/>
          <exon e_start="5709" e_stop="5618"/>
          <exon e_start="5524" e_stop="5408"/>
          <exon e_start="4817" e_stop="4703"/>
          <exon e_start="4582" e_stop="4511"/>
          <exon e_start="4013" e_stop="3817"/>
          <exon e_start="3723" e_stop="3630"/>
          <exon e_start="3069" e_stop="2963"/>
          <exon e_start="2710" e_stop="2666"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGATGGAGAAAGATTGCCTTTGGCGGTCAAGGAATTGGGAACTTGTGACCTATACCCACAAGTGAGTCAGATTTACAGCTAATACCTGGCATTTTGTATAATCTTTTACAACCTGCTTTGCAACTGTGAATTGGATCTGGTTCCATAGTTCAAATACTTCAATTGTTATTCATGTAAGGTTATCCTGTTTGGTTTGCATAAACTGTATCCTCTTTCTAGTAAAAGACTTGTTATTTTCGTTAAAAAAGCAACGCATAGATTTGAAACCAATCCTCCCTTAATCTGATTTCTGGTTTTCGTTTTGTACAGTTTCTCTCTTCAGACTTCCATTGTGGGAAGCCATTTTGTTGTAGTTATGCTTATCCCAGAAGATATGACTTATGTACCTGTTTCTTTGCTTTCTTTATGTCCTTAAAAATGTGTCGTTTTATTGGTTCTTTAGTCATCTCCTCATGGTTTGAGGTTGTGCTTGCCATTTGGAATATACTAGTTTCCCTCTTAGGGTTAAAGGATGTAATTACTTAGATGTCACTTACTGTTGATCTCATTCTTTTTCTCCTCCTTCACAGAGCTTAAAGCATAACCCCAATGGAAGGTTTGTTGTTGTTTGTGGAGACGGTGAGTATATCATATATACTGCTCTGGCCTGGAGAAATAGGTCATTTGGCTCAGCTCTGGAATTTGTTTGGTCGTCTGATGGAGAGTATGCTATCCGAGAAAGTACTTCAAGGATTAAGATTTTCAGCAAAAATTTCCAGGTTTCATGAATGTCCTCACAACTGACTCCCTCCCAAATTTGGATTACTTTTGTGTTATGCATCAGATTATGTGTTATTTAATCTAATGATATTACTTTAAATAGTGGACCCACAATTAGATGTTATCCCCTCTTACCCAGTCTCCTTTTCTCTCTCCTATTTCGTACCCTTTAATTTGTTACTTCTTAGAGGCCTGACAAGTAAATTTGGGGTCATGTGCATGCAGTAAGTTGTAGTTCTTTAATGCATTTAGCTTCTTTTTGTCTTGAAGCTGAAGGGTGTATTGTTTAGTAGTTTCTTTTGTTCACCTGGATTGAAGTGATTACACTGATGTCTCCAGGAAAAAAAGAGTATCCGCCCGACTTTCTCTGCTGAGCACATCTATGGGGGTACCTTATTGGCAATGTGCTCAAATGATTTCATTTGCTTTTACGATTGGATTGAGTGCAGGTTGATACGACGTATTGATGTTAATGTCAAAGTAAGATATATAAGCTTGACTTCCATAAGTGCTATGTTGGTCCTTTACTTTTTGATGGTTGTCACAATATCATTTTTTTTTTATTCAACTACTTCAGAACCTCTACTGGGCTGACAGTGGTGATCTGGTGGCTATTGCTAGTGATACTTCATTCTACATACTGAAGTATAATGTGAGAGCTCTCTTTCCCAGATTTTTAAATTACTACTATATCTTTACTTTGCAAGCTATTGTTATAATTGTCTTTTGGTTAAACCTGCAGCGTGATGTTGTCTCTGCACATTTAGATAGTGGAAGATCTGTAGATGAACAAGGTGTTGAAGATGCTTTTGAACTTCTTTATGAGATAAATGAACGTGTCAGAACTGGAATTTGGGTAGGAGATTGTTTCATTTACAACAATTCTTCTTCGAGACTGAATTACTGTGTAGGCGGCGAGGTATGAAAAGTCATTCATACAGTTTTATGGACCTCTTTGTTTTCAGAATTTCTCATCTCATAGGTGATTAACAGTGTTTCTTATGATCTTTAGGTGACCACAATGTTTCACTTAGACCGACCCATGTACCTGCTGGGATATCTCGCTAATCAAAGTAGAGTTTTCCTGATTGACAAAGAGTTCAAGTAAGTAGGCTCATGACAGCTTCTCACACAGGAACTAGAAAAATTGTTTCAAGTATGACTCTTCTACGATGACCCATATTCTTTTCATTACAGTGTCGTGGGATATACTCTTCTGCTCAGCTTGATAGAGTACAAGACACTTGTGATGCGTGGTGACTGGGACAGAGCTAATGCAGTCTTACCATCAATTCCTAAGGATCACCATAACAGGTACATCTCTATTCTTCTTGTAATATGTTTTTTTCTGTGAATATGATTAACGAATTGTGCTTGATTGCGATTTTCCTTCATCTTCGAACGCAGTTGCAAAATGTGACAAACTGGCAGTTGAAAAAATGCAAACTATCATTTTATTGTAGTCTATGATGTAGATTGTTTTCTTAAGACACATTATTGAGTATTGGAGTGAAATGTGTCCAAATGGTATGAAATGGATTTTGAGGTTTCATATAGCCCATCCCATCTAGTTTGTGAACACAGTTGTATTGATGTAATATTGTTTATTATCCTGGGTTGTGGCACACACTACTAAAGTTACTCTGATAGCCGTTGTAATTTTAGTGCTAATACGTGCTACAAGCCCTGACTTTCGGAAGGGATGCGTATATTAGATAAGAGGATATTCTTACTGCTATGCTATGTGATTGGATGCAGTCACTCATGTTCTTATTTTTCCTATGATCTATTGGGATCTGCATTAATATATTGTATTTAGTAGTTGAGCCTTGGGGGGGGGGGGTTCTGTCTTATATGATGGGATTATCAAGTTCTCTAAGTTCTGATGAAATGATTCCCTGTAGTGTTGCTCGTTTCTTGGAATCACGGGGTATGATTGAGGAAGCATTGGAAGTTGCAACAGACGCTGACTACAGATTTGAACTTGCCATACAGTTGGGTAAATTAGAAATTGCAAAGGTAAGGGCTACTAACTCGTGGAAGTGTGTGGTTTGACTTCAGCCTCTCTTCCTTATACTTGTCTCTGTCAGAAGAACCATATGTCGTTAAGTATGGCCATGTGCCCCTTCTTGTTTGCAGGAAATCGCTGTAGTAGCACAGAGTGAATCCAAATGGAAGCAGTTGGGTGAACTGGCAATGTCTGCTGGAATGGTAATTGATACTTACAGCCGCTTGAGCCCCTTTTTTTTTGAAAACAAATTCTTACAAGGGGGAACATAAACCACTTGAATTTTCGAAAAAAAAAGTAAATTGATGAGTTTTACAAATGGTCAGTGTTTGAGCTCCTTAATTTATATCAGAAATTCCAAGTCAGCTGTCCGAAAGTTTCTTAGCAGAAAACTCCTGACCCATACCATTTTTGCTGCTGGAAAAATTTATGGTTAAGGTTCTGAACGCTGTTGGTTGTCCTTTTGCCTGTGAAAGTTTACCGAATGTTTCTGTTTGTAGTTCAGTGTAAAGGTTGTTTGTAGTTGATTTCTGCAGCCTCCTGGTCATCCTTTTTAGTACTCTTCACTTGGATTATAACAACAAGCCCAGTGTGATCCCACAAATGGGGTCTGGGGATGGTGGGGTGTACACAAACCTTATCCCTACCAACTGTTCTTTACTTGAATTCTCTATCAATATTGCTGTTCTGTATTTTGCAGCTGGAGATGGCAGAGGATTGTTTGAAATACGCTAATGACTTGAGTGGTTTGCTGATGCTTTATTCCTCGTTAGGAGATGCTGAAGGAATGGCTGAATTAGCATCTCTTGCAAAAGAGCATGGAAGAAACAATGTTGCATTCCTTTGCCTGTTCCTCCTGGGTAAAGTGGAAGATTGTGTTCAGCTGTTGGTTGACAGGTACTTTTTCATTTGTGTTCCTCTTCAGTTTGTTGCCACTTGTCAGATTGTTTCAACTCTGGAATGATATTCTCTATTGCAATTACTTTGCAGCAACCGGATACCTGAGGCTGCATTTATGGCAAGATCTTACCTTCCAAGTAAGGTTTCTGAAATAGTTGCAATGTGGAGGAAGGATCTTAATAAGGTTAGTGATATTCATTTTTGTGATTGCTATTAGATTTTCATGGTCCACTATTTAAAGAGCTGTTTCTCTTGGTCAGTTTTTTAAAAAAGTATGCTACTTTCGTTTTAATCTTTTTTAAAATAAATAAAGAAATAAAGTACAATGCTTCAGCCTCATGCTGTGGGGATCATGCTTTTTGACCTTTAAGTTAACAGTGCAAAGGACTTAGAGCTCTTTGATGGTACTGTTATGCCTGTGATAAGACATAAAAATTTGCTGTTGTTGACGTGTGTGTTCTCTTTTCTAACTTTTGCTTGCATTTGCATGTGCCTGAAAATAGCCTTGAAATATTTCTGTCGATTTCTCTCAGCGGCCAATGTGGCCCGAGAACACTCTATATGCGATAGACATCCATTTAACTTCACGATTAGAATTTGAGTGTCTTTGTAAAAGAATGATTTGAACTTGAGCGCAAGTAGTAAGAGAACTGCAGAAAAGGTTGTCTTTTATGGGTAAGAAACAGTCTGCAGAATTATCTGTCAGATTTTGAACCTAGTTTTCTGCATGATTTCTGCCTGTAGGTTAACCAGAAAGCAGCAGAAGCTTTGGCTGATCCTGAAGAATATCCCAACATGTTTGAGCACTGGCAAATTGCACATGCAGTTGAAGCTAGAGTCGCAGAGGAAAGGTGTATATAGACCACTATTCCCCTTTCTGTGCATCTTTTGTAGCTTGTACACTGGTGGCTCTTTGAAAAAAATTTACATCTCTTTTTCTATTTGTACTCCTTTCCTCTTATTGCTGGAGTATGAGTTCAACAGGGTTTAATGGATGGGCATATTTAACACCATTGTGGACTGGTAGCCAGTTATGAGACCAAGTGTTGCACAATTTCATTGTGAAAATTTTTCATCAAGGTTATTTTCTAATTTTTATGTAGGGGTGTATACCCACCAGCAGCAGATTATGGAAATTATGCTGATAG</genome_strand>
        <mrna_strand>CTGATGGAGAAAGATTGCCTTTGGCGGTCAAGGAATTGGGAACTTGTGACCTATACCCACAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTAAAGCATAACCCCAATGGAAGGTTTGTTGTTGTTTGTGGAGACGGTGAGTATATCATATATACTGCTCTGGCCTGGAGAAATAGGTCATTTGGCTCAGCTCTGGAATTTGTTTGGTCGTCTGATGGAGAGTATGCTATCCGAGAAAGTACTTCAAGGATTAAGATTTTCAGCAAAAATTTCCAG....................................................................................................................................................................................................................................................................................................................................................GAAAAAAAGAGTATCCGCCCGACTTTCTCTGCTGAGCACATCTATGGGGGTACCTTATTGGCAATGTGCTCAAATGATTTCATTTGCTTTTACGATTGGATTGAGTGCAGGTTGATACGACGTATTGATGTTAATGTCAAA.................................................................................................AACCTCTACTGGGCTGACAGTGGTGATCTGGTGGCTATTGCTAGTGATACTTCATTCTACATACTGAAGTATAAT..........................................................................................CGTGATGTTGTCTCTGCACATTTAGATAGTGGAAGATCTGTAGATGAACAAGGTGTTGAAGATGCTTTTGAACTTCTTTATGAGATAAATGAACGTGTCAGAACTGGAATTTGGGTAGGAGATTGTTTCATTTACAACAATTCTTCTTCGAGACTGAATTACTGTGTAGGCGGCGAG.............................................................................................GTGACCACAATGTTTCACTTAGACCGACCCATGTACCTGCTGGGATATCTCGCTAATCAAAGTAGAGTTTTCCTGATTGACAAAGAGTTCAA.............................................................................................TGTCGTGGGATATACTCTTCTGCTCAGCTTGATAGAGTACAAGACACTTGTGATGCGTGGTGACTGGGACAGAGCTAATGCAGTCTTACCATCAATTCCTAAGGATCACCATAACAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTGCTCGTTTCTTGGAATCACGGGGTATGATTGAGGAAGCATTGGAAGTTGCAACAGACGCTGACTACAGATTTGAACTTGCCATACAGTTGGGTAAATTAGAAATTGCAAAG........................................................................................................................GAAATCGCTGTAGTAGCACAGAGTGAATCCAAATGGAAGCAGTTGGGTGAACTGGCAATGTCTGCTGGAATG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGAGATGGCAGAGGATTGTTTGAAATACGCTAATGACTTGAGTGGTTTGCTGATGCTTTATTCCTCGTTAGGAGATGCTGAAGGAATGGCTGAATTAGCATCTCTTGCAAAAGAGCATGGAAGAAACAATGTTGCATTCCTTTGCCTGTTCCTCCTGGGTAAAGTGGAAGATTGTGTTCAGCTGTTGGTTGACAG.............................................................................................CAACCGGATACCTGAGGCTGCATTTATGGCAAGATCTTACCTTCCAAGTAAGGTTTCTGAAATAGTTGCAATGTGGAGGAAGGATCTTAATAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTAACCAGAAAGCAGCAGAAGCTTTGGCTGATCCTGAAGAATATCCCAACATGTTTGAGCACTGGCAAATTGCACATGCAGTTGAAGCTAGAGTCGCAGAGGAAAG............................................................................................................................................................................................................................................................GGGTGTATACCCACCAGCAGCAGATTATGGAAATTATGCTGATAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C00HBa0081D06-3cnAc/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U330098" ref_strand="+" ref_description="SGN-U330098        Tomato 200607 #1 [2 ESTs aligned] arabidopsis/peptide: | Symbol: None | serine-rich protein-related, contains some similarity to serine-rich proteins | chr3:4258013-4258512 FORWARD | Aliases: None(evalue: 1e-05, score=46.6) genbank/nr: unknown(evalue: 3e-05, score=51.2)">
      <seq>ccaatgtgttacccgagagaacgtcctggacgattcgttcctcctgatgaagggcagagaagggaacaagtggagatacaagttgtaagcagagaagtatcaaatggaaatggatcatcagctgaagctggaacaatgaaacaatgtgtttgttcccctacacatcatccaggctcattcaggtgtaggcatcatcatgctgattacaaatgggctgctcaacagggaactattaagactgctgatcattagttccctacgtgaactcacatgtaaaaattcatgacattcatctgtcctgtatttactttattttctacgcttcttcatctatatgtgtgttttctttaccctggttatattaagacttgtaatatcattacgaaactgagtcactttcaagaaatagcctataaaatttcaaatagagttgatttctcggatggtcacttgttttagaaagtcactttctttgttgaagaaaatttgaatcagaagaaatgtgattttctaagataataactattagttgagtgaccatctgagaaatcaaccctcacacatgtgtttcaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C00HBa0081D06-3cnAc/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C00HBa0081D06.1" temp_strand="+" temp_description="C00HBa0081D06.1  AC218144.2 htgs_phase:3 submitted_to_sgn_as:C12HBa0081D06">
        <position start="21465" stop="22638"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="21765" g_stop="22346" g_length="582"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="582" r_length="582" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C00HBa0081D06.1" gen_strand="+" ref_id="SGN-U330098" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>582</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C00HBa0081D06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U330098" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="21765" e_stop="22346"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCAATGTGTTACCCGAGAGAACGTCCTGGACGATTCGTTCCTCCTGATGAAGGGCAGAGAAGGGAACAAGTGGAGATACAAGTTGTAAGCAGAGAAGTATCAAATGGAAATGGATCATCAGCTGAAGCTGGAACAATGAAACAATGTGTTTGTTCCCCTACACATCATCCAGGCTCATTCAGGTGTAGGCATCATCATGCTGATTACAAATGGGCTGCTCAACAGGGAACTATTAAGACTGCTGATCATTAGTTCCCTACGTGAACTCACATGTAAAAATTCATGACATTCATCTGTCCTGTATTTACTTTATTTTCTACGCTTCTTCATCTATATGTGTGTTTTCTTTACCCTGGTTATATTAAGACTTGTAATATCATTACGAAACTGAGTCACTTTCAAGAAATAGCCTATAAAATTTCAAATAGAGTTGATTTCTCGGATGGTCACTTGTTTTAGAAAGTCACTTTCTTTGTTGAAGAAAATTTGAATCAGAAGAAATGTGATTTTCTAAGATAATAACTATTAGTTGAGTGACCATCTGAGAAATCAACCCTCACACATGTGTTTCAAATTTTCAAT</genome_strand>
        <mrna_strand>CCAATGTGTTACCCGAGAGAACGTCCTGGACGATTCGTTCCTCCTGATGAAGGGCAGAGAAGGGAACAAGTGGAGATACAAGTTGTAAGCAGAGAAGTATCAAATGGAAATGGATCATCAGCTGAAGCTGGAACAATGAAACAATGTGTTTGTTCCCCTACACATCATCCAGGCTCATTCAGGTGTAGGCATCATCATGCTGATTACAAATGGGCTGCTCAACAGGGAACTATTAAGACTGCTGATCATTAGTTCCCTACGTGAACTCACATGTAAAAATTCATGACATTCATCTGTCCTGTATTTACTTTATTTTCTACGCTTCTTCATCTATATGTGTGTTTTCTTTACCCTGGTTATATTAAGACTTGTAATATCATTACGAAACTGAGTCACTTTCAAGAAATAGCCTATAAAATTTCAAATAGAGTTGATTTCTCGGATGGTCACTTGTTTTAGAAAGTCACTTTCTTTGTTGAAGAAAATTTGAATCAGAAGAAATGTGATTTTCTAAGATAATAACTATTAGTTGAGTGACCATCTGAGAAATCAACCCTCACACATGTGTTTCAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C00HBa0081D06-3cnAc/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U332084" ref_strand="+" ref_description="SGN-U332084        Tomato 200607 #1 [2 ESTs aligned] arabidopsis/peptide: AT1G79900.1 | Symbol: None | mitochondrial substrate carrier family protein, contains Pfam profile: PF00153 mitochondrial carrier protein | chr1:30056972-30058624 REVERSE | Aliases: F19K16.14, F19K16_14 (evalue: 8e-97, score=349) genbank/nr: gi|15220023|ref|NP_178108.1| mitochondrial carrier protein family [Arabidopsis thaliana] gi|25406613|pir||B96830 hypothetical protein F19K16.14 [imported] - Arabidopsis thaliana gi|12324589|gb|AAG52250.1| putative carnitine/acylcarnitine translocase; 50581-51656 [Arabidopsis thaliana] gi|17529160|gb|AAL38806.1| putative carnitine/acylcarnitine translocase [Arabidopsis thaliana] gi|20465853|gb|AAM20031.1| putative carnitine/acylcarnitine translocase [Arabidopsis thaliana](evalue: 6e-95, score=349)">
      <seq>ggttctgctttcaacatcctccggggtgtttccgccactgaaggacctctggctctatacagaggcatggctgctcctctcgcttccgtcacatttcagaacgccatggtatttcagatttatgcagtgctatctcgagcattggacaggaatgttccagccagtgatccaccctcctacaaaggagtggccttaggtggatttggaacaggagcattacaaagcctaatgctcactcctgtcgaacttgtgaaaattcgacttcagttgcaacagagaaacatcctggataacaaaaatcaaatgactagttgtaagggtccaactgatgtggcaagaaacatattcagacaagaaggatggaggggaatttatcgcggattaacaattacagtcctcagagatgcaccagctcacggcctatatttctggacatacgagtatgtaagagagcaacttcatccaggatgtcgtaagaatggtcaagagagctttagaacaatgcttatagcaggtggtcttgcaggagtagctagctggatatgctgctatcccttagatgttattaaaacccgattccaggctcagtcacaatctacaccattgagatatactggcattgttgattgtttcaggagaagtgtgaaacaagagggatataatgtgctctggagaggtttgggaactgcagttgccagagcatttgtagtgaatggggctatattcactgccctatgaactgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C00HBa0081D06-3cnAc/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C00HBa0081D06.1" temp_strand="+" temp_description="C00HBa0081D06.1  AC218144.2 htgs_phase:3 submitted_to_sgn_as:C12HBa0081D06">
        <position start="32545" stop="36004"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="32845" g_stop="32943" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="99" r_length="99" r_score="0.970"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="32944" i_stop="35060" i_length="2117">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35061" g_stop="35704" g_length="644"/>
          <reference_exon_boundary r_type="cDNA" r_start="100" r_stop="743" r_length="644" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C00HBa0081D06.1" gen_strand="+" ref_id="SGN-U332084" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>743</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C00HBa0081D06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U332084" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="32845" e_stop="32943"/>
          <exon e_start="35061" e_stop="35704"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGTTCTGCTTTCAACATCCTCCGCCGTGTTGCCGCCACTGAAGGACCTCTGGCTCTATACAGAGGCATGGCTGCTCCTCTCGCTTCCGTCACATTTCAGGTCATTCCTTGTTTTTATCCAGCAGTAATTACGGTTTTTACTAATTGTATATATATAAAATTGAAGTTGTCAAAATTTTGAATTCGCATCTGAATCACACGCGTAAAATGAATGTTTATTCATGTATATAAATCAGACTTCTCCCCTGAGTTTCTCCTAGCTAAGCTTATTAGAGCAGGTGGATTCCATCAAACTCATTATATTCAAATAAATATGTTTTATGTTTAAAATTCATAAAAATAAAATTTTAATTTCACTGCGTATTACTTTGCCCTGTTTCTCGCCGAAGATGAGGAGTCCAAAATTTCACAGTTACAAAAAGCAAACATCGTAAAAGATTGAGATGGGTATTACGTGGAGATAAGTGAAGAGGTCTAATAACACGTAATAGTTATATTTTGTAACTACCAAACAAAGAGAGATAGAGACTGTTGGGTCCTCAATTGGATTTTTTACGTTCACGGAACTAATACCAAATTAAGCTTGCTTAACAATAATAATAATAATAAAAGTAATAAATATTAGAATTTAGAGACCACGAGTCTCCATCATAAATAAATAAATAAATAAATAAATAAATGGAGTCTTAGTCATCAAATCTTCATTCATTGGTGATTCATATCCGTTTGTGGAAGAAAAAAAAGGGAATTAAGTCATTAACTAGTAACTAGTATTCTAGCAGGAAAAGAATGGACATTCTCAAATGACATGAGCACTTAAACATCCTTTATTTTATTATATGAACTATTTTCCCACACCACCAATTCTATTTAGATGGTTGTTACGTATTATTTAATACTGTATGATATTATATTGTTTGGATGAATATAATTCTATTTAGATGGTTGTTACGTATTATTTAATACTGTATGATATTATATTGTTTGGATGAATATAATGTATGTTTAACAGAGTAAAGTTAGAAAAAGTAGGATAAAAGGTAAAATAGGACCTACAAGCTCTACGATAAAAGGTAAAATAGGATGTACAAGCTCTAGGGTTTCAAGAAGCAAACCTGAAAAATATGCAACAATATTCTATCAACAACAGGGAGCAGCTAAATGGATATTCATTACAAGATTAGCTATACTGAACATGCTATATATCAACGATAGGCTAATGAATTGGGGTGTCACAAATAACCAACAGTATGTCTTATGTAGTGAGGGTATTGAGTCAAGTGAACATCTCTTTTTTACTTGTGATTACTCTAAAAACATATGGACACAGCTGTTATATTGACAAGGAATAACTAGAGACCAGCTAGCACTTGACAAGATGAGCTTGAGTGGGCCAACAGAAATGCACAAGGAAACGGAGCAGCACACCACTATCTTTCGAATGAGCATTGCAGCTGCAGTTAACTATATCTGGACGGAAAGGAATAATCAGGTCTTCCAGGCTAAGTCCAGCAAACCACACATGGTAACCAAAAGAATAGTGCAAGAGAGATGTTCGAAGCATAAGCTTACAAACAAACTAGTAGGACTAGATCACTATGCCTAGACCTTTTGTAGATATGTAGTCTTTGAAGAAATGATTGTTAGTTCATTGTTTGGTTGCCACACCAATACATATTTGTACTGAATGTTAATAAAATAGGACTACTAAACAAAAAATAAGAGCAAGATGAGGGGAGAAATAGGTAACATTCGATTGCACCAAAATTAAAGTTATAATTTAAACAAGGAAAAAGGGTCTGATATACCTCACAACTTTGCCATTTGGAGCTGATATACCCCTCGTTATGAAAGTGACTCATATATGACCTTGCCATAATACAAACGGCTCACATATTTAAGTCAAAAAAATAATATATAAGTGAAGATGGGCTATCAACTGGAGTATTATTCACTTCTCATGAGAACATACACTATAGGTTTAAATTGTATTTCATGCATAATTTGATATGTTAATTTTTTGCAACTTTAGCTAATTTGCTGCCACAGTTTACAGATTGGTACAAGTTTGCTACATATGAACCTTGAGCAAATCTTCAACTTGATACATGTAACTCATTGTTGTTCTTATTTGTAAGACTAATCGATATAGGGTCTAATAATCCCTGAACTTAATTAATTTCTACAATGTGTAAAATAGTTTCTTTGCTATTGCAGAACGCCATGGTATTTCAGATTTATGCAGTGCTATCTCGAGCATTGGACAGGAATGTTCCAGCCAGTGATCCACCCTCCTACAAAGGAGTGGCCTTAGGTGGATTTGGAACAGGAGCATTACAAAGCCTAATGCTCACTCCTGTCGAACTTGTGAAAATTCGACTTCAGTTGCAACAGAGAAACATCCTGGATAACAAAAATCAAATGACTAGTTGTAAGGGTCCAACTGATGTGGCAAGAAACATATTCAGACAAGAAGGATGGAGGGGAATTTATCGCGGATTAACAATTACAGTCCTCAGAGATGCACCAGCTCACGGCCTATATTTCTGGACATACGAGTATGTAAGAGAGCAACTTCATCCAGGATGTCGTAAGAATGGTCAAGAGAGCTTTAGAACAATGCTTATAGCAGGTGGTCTTGCAGGAGTAGCTAGCTGGATATGCTGCTATCCCTTAGATGTTATTAAAACCCGATTCCAGGCTCAGTCACAATCTACACCATTGAGATATACTGGCATTGTTGATTGTTTCAGGAGAAGTGTGAAACAAGAGGGATATAATGTGCTCTGGAGAGGTTTGGGAACTGCAGTTGCCAGAGCATTTGTAGTGAATGGGGCTATATTCACTG-CCTATGAAACTGC</genome_strand>
        <mrna_strand>GGTTCTGCTTTCAACATCCTCCGGGGTGTTTCCGCCACTGAAGGACCTCTGGCTCTATACAGAGGCATGGCTGCTCCTCTCGCTTCCGTCACATTTCAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGCCATGGTATTTCAGATTTATGCAGTGCTATCTCGAGCATTGGACAGGAATGTTCCAGCCAGTGATCCACCCTCCTACAAAGGAGTGGCCTTAGGTGGATTTGGAACAGGAGCATTACAAAGCCTAATGCTCACTCCTGTCGAACTTGTGAAAATTCGACTTCAGTTGCAACAGAGAAACATCCTGGATAACAAAAATCAAATGACTAGTTGTAAGGGTCCAACTGATGTGGCAAGAAACATATTCAGACAAGAAGGATGGAGGGGAATTTATCGCGGATTAACAATTACAGTCCTCAGAGATGCACCAGCTCACGGCCTATATTTCTGGACATACGAGTATGTAAGAGAGCAACTTCATCCAGGATGTCGTAAGAATGGTCAAGAGAGCTTTAGAACAATGCTTATAGCAGGTGGTCTTGCAGGAGTAGCTAGCTGGATATGCTGCTATCCCTTAGATGTTATTAAAACCCGATTCCAGGCTCAGTCACAATCTACACCATTGAGATATACTGGCATTGTTGATTGTTTCAGGAGAAGTGTGAAACAAGAGGGATATAATGTGCTCTGGAGAGGTTTGGGAACTGCAGTTGCCAGAGCATTTGTAGTGAATGGGGCTATATTCACTGCCCTATG-AACTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C00HBa0081D06-3cnAc/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U343272" ref_strand="+" ref_description="SGN-U343272        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: AT1G79900.1 | Symbol: None | mitochondrial substrate carrier family protein, contains Pfam profile: PF00153 mitochondrial carrier protein | chr1:30056972-30058624 REVERSE | Aliases: F19K16.14, F19K16_14 (evalue: 1e-23, score=107) genbank/nr: gi|15220023|ref|NP_178108.1| mitochondrial carrier protein family [Arabidopsis thaliana] gi|25406613|pir||B96830 hypothetical protein F19K16.14 [imported] - Arabidopsis thaliana gi|12324589|gb|AAG52250.1| putative carnitine/acylcarnitine translocase; 50581-51656 [Arabidopsis thaliana] gi|17529160|gb|AAL38806.1| putative carnitine/acylcarnitine translocase [Arabidopsis thaliana] gi|20465853|gb|AAM20031.1| putative carnitine/acylcarnitine translocase [Arabidopsis thaliana](evalue: 8e-22, score=107)">
      <seq>tttttttttactacataaatgaaagttacattacactattttaatcttggatgttaaaccatgtccacaggaagtgcagttgatacgaaaagactgatattacatttcagcttgaggtataaaccatacaattggtataatgaataatataaaatgagacaacacagctcaatgactacttactcctatattagaatgcattttcagtttgaatattcgcgtgaacttctttgttgttgttgatgaaaaggcaccttaaggcagtttcataggcagtgaatatagccccattcactacaaatgctctggcaactgcagttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C00HBa0081D06-3cnAc/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C00HBa0081D06.1" temp_strand="-" temp_description="C00HBa0081D06.1  AC218144.2 htgs_phase:3 submitted_to_sgn_as:C12HBa0081D06">
        <position start="36258" stop="35344"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="35964" g_stop="35644" g_length="321"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="321" r_length="321" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C00HBa0081D06.1" gen_strand="-" ref_id="SGN-U343272" ref_strand="+">
        <total_alignment_score>0.984</total_alignment_score>
        <cumulative_length_of_scored_exons>321</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C00HBa0081D06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U343272" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="35964" e_stop="35644"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGGAGTATACTACATAAATGAAAGTTACATTACACTATTTTAATCTTGGATGTTAAACCATGTCCACAGGAAGTGCAGTTGATACGAAAAGACTGATATTACATTTCAGCTTGAGGTATAAACCATACAATTGGTATAATGAATAATATAAAATGAGACAACACAGCTCAATGACTACTTACTCCTATATTAGAATGCATTTTCAGTTTGAATATTCGCGTGAACTTCTTTGTTGTTGTTGATGAAAAGGCACCTTAAGGCAGTTTCATAGGCAGTGAATATAGCCCCATTCACTACAAATGCTCTGGCAACTGCAGTTC</genome_strand>
        <mrna_strand>TTTTTTTTTACTACATAAATGAAAGTTACATTACACTATTTTAATCTTGGATGTTAAACCATGTCCACAGGAAGTGCAGTTGATACGAAAAGACTGATATTACATTTCAGCTTGAGGTATAAACCATACAATTGGTATAATGAATAATATAAAATGAGACAACACAGCTCAATGACTACTTACTCCTATATTAGAATGCATTTTCAGTTTGAATATTCGCGTGAACTTCTTTGTTGTTGTTGATGAAAAGGCACCTTAAGGCAGTTTCATAGGCAGTGAATATAGCCCCATTCACTACAAATGCTCTGGCAACTGCAGTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C00HBa0081D06-3cnAc/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U341424" ref_strand="+" ref_description="SGN-U341424        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: | Symbol: None | expressed protein, EST gb:N65467 comes from this gene | chr1:5249755-5250568 FORWARD | Aliases: F9L1.20, F9L1_20(evalue: 1e-08, score=57.4) genbank/nr: gi|18394218|ref|NP_563968.1| expressed protein [Arabidopsis thaliana] gi|18252981|gb|AAL62417.1| unknown protein [Arabidopsis thaliana] gi|21389659|gb|AAM48028.1| unknown protein [Arabidopsis thaliana] gi|21592604|gb|AAM64553.1| unknown [Arabidopsis thaliana](evalue: 9e-07, score=57.4)">
      <seq>aagaatcagtaaacaacacgaggaaagtacagaaagaaaaaatggaagatgcattgcttcgaaacacaagtaaaggtgaggtattagtacagaagatgaaggaactagagatgatggatgaggaagatttggatcaaatgatggacataaaagaagttctctactactactcttacctaaaatgtccagtttaccttgacattgttgacaggtatttcatggacatgtataatgagttatcacttccacagacattcatcaatgtcaacagttaaatgttaagtcttggtcacattaagctctagaaactacagagaaaatgtttttgcttactaatgaaagttttcgagcttagctaacttcttttgtctgttaattgccatgccatgtacttctatattgaaaaatttcagaaaacctcattagatctgagttaatttctcagacgatcattcaactagtagttattacctcagaaaattggaatcaagaagtaaagtgactttcagagttgacatttattaattgaatgaccatatgaggaatcaaccctattcgatttgtatttcttgagcatgtttctttacaatgtcaaataagttatttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C00HBa0081D06-3cnAc/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C00HBa0081D06.1" temp_strand="-" temp_description="C00HBa0081D06.1  AC218144.2 htgs_phase:3 submitted_to_sgn_as:C12HBa0081D06">
        <position start="37142" stop="35936"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36842" g_stop="36236" g_length="607"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="607" r_length="607" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C00HBa0081D06.1" gen_strand="-" ref_id="SGN-U341424" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>607</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C00HBa0081D06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U341424" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36842" e_stop="36236"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGAATCAGTAAACAACACGAGGAAAGTACAGAAAGAAAAAATGGAAGATGCATTGCTTCGAAACACAAGTAAAGGTGAGGTATTAGTACAGAAGATGAAGGAACTAGAGATGATGGATGAGGAAGATTTGGATCAAATGATGGACATAAAAGAAGTTCTCTACTACTACTCTTACCTAAAATGTCCAGTTTACCTTGACATTGTTGACAGGTATTTCATGGACATGTATAATGAGTTATCACTTCCACAGACATTCATCAATGTCAACAGTTAAATGTTAAGTCTTGGTCACATTAAGCTCTAGAAACTACAGAGAAAATGTTTTTGCTTACTAATGAAAGTTTTCGAGCTTAGCTAACTTCTTTTGTCTGTTAATTGCCATGCCATGTACTTCTATATTGAAAAATTTCAGAAAACCTCATTAGATCTGAGTTAATTTCTCAGACGATCATTCAACTAGTAGTTATTACCTCAGAAAATTGGAATCAAGAAGTAAAGTGACTTTCAGAGTTGACATTTATTAATTGAATGACCATATGAGGAATCAACCCTATTCGATTTGTATTTCTTGAGCATGTTTCTTTACAATGTCAAATAAGTTATTTG</genome_strand>
        <mrna_strand>AAGAATCAGTAAACAACACGAGGAAAGTACAGAAAGAAAAAATGGAAGATGCATTGCTTCGAAACACAAGTAAAGGTGAGGTATTAGTACAGAAGATGAAGGAACTAGAGATGATGGATGAGGAAGATTTGGATCAAATGATGGACATAAAAGAAGTTCTCTACTACTACTCTTACCTAAAATGTCCAGTTTACCTTGACATTGTTGACAGGTATTTCATGGACATGTATAATGAGTTATCACTTCCACAGACATTCATCAATGTCAACAGTTAAATGTTAAGTCTTGGTCACATTAAGCTCTAGAAACTACAGAGAAAATGTTTTTGCTTACTAATGAAAGTTTTCGAGCTTAGCTAACTTCTTTTGTCTGTTAATTGCCATGCCATGTACTTCTATATTGAAAAATTTCAGAAAACCTCATTAGATCTGAGTTAATTTCTCAGACGATCATTCAACTAGTAGTTATTACCTCAGAAAATTGGAATCAAGAAGTAAAGTGACTTTCAGAGTTGACATTTATTAATTGAATGACCATATGAGGAATCAACCCTATTCGATTTGTATTTCTTGAGCATGTTTCTTTACAATGTCAAATAAGTTATTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C00HBa0081D06-3cnAc/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U313047" ref_strand="+" ref_description="SGN-U313047        Tomato 200607 #1 [38 ESTs aligned] arabidopsis/peptide: | Symbol: None | 60S ribosomal protein L37 (RPL37B), similar to SP:Q43292 from (Arabidopsis thaliana) | chr1:19478716-19479887 REVERSE | Aliases: F19K6.12, F19K6_12(evalue: 2e-47, score=186) genbank/nr: gi|15218208|ref|NP_175640.1| 60S ribosomal protein L37 (RPL37B) [Arabidopsis thaliana] gi|20143906|sp|Q43292|RL37_ARATH 60S ribosomal protein L37 gi|25295102|pir||B96563 hypothetical protein F19K6.12 [imported] - Arabidopsis thaliana gi|12323122|gb|AAG51542.1| 60S ribosomal protein L37, putative; 56921-57860 [Arabidopsis thaliana] gi|13877907|gb|AAK44031.1| putative 60S ribosomal protein L37 [Arabidopsis thaliana] gi|21280805|gb|AAM44969.1| putative 60S ribosomal protein L37 [Arabidopsis thaliana](evalue: 1e-45, score=186)">
      <seq>cccatggggatccgatgataagcactgcctagatcgccgcagttctcagttgagaaagctcaggaggaggtcgctagggtttctgcaactgtagcgtaatgggtaagggaacaggaagcttcggtaagaggaggaacaagacccacacactatgtgtgaggtgtggaagacggagcttccatctccagaagagccgttgctctgcttgtgcttaccctgctgcccgtaaaaggacatacaactggagtgtgaaggctatccgcagaaagacaactggaactggccgcatgaggtatcttcgtaacgtccctcgcaggttcaagaccaatttcagagaaggtactgaagcagctccaaggaagaagggagtagcttctgcttgaggccttcgagacagttacttgagaggctattagtggtagcttcattttgatatttcaagtgttagagcaagtaaaattttgggaccttctatcttagtttttattgccctttgaaagattaatgtgcttaaaattttaaaagtatgtgttccaacttggcatttttataaagaacggatcttgagacttccaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaactcgaggttgtgttggagttggagaaattagagggggagatttctctgtctctgatggtcttgtttgccccaaacctcgccggaatgggcttttcaacgaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C00HBa0081D06-3cnAc/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C00HBa0081D06.1" temp_strand="+" temp_description="C00HBa0081D06.1  AC218144.2 htgs_phase:3 submitted_to_sgn_as:C12HBa0081D06">
        <position start="43832" stop="116997"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="44139" g_stop="44223" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="17" r_stop="101" r_length="85" r_score="0.988"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="44224" i_stop="44471" i_length="248">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="44472" g_stop="44607" g_length="136"/>
          <reference_exon_boundary r_type="cDNA" r_start="102" r_stop="237" r_length="136" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="44608" i_stop="44721" i_length="114">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="44722" g_stop="44823" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="238" r_stop="339" r_length="102" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="44824" i_stop="45962" i_length="1139">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.958" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="45963" g_stop="46201" g_length="239"/>
          <reference_exon_boundary r_type="cDNA" r_start="340" r_stop="578" r_length="239" r_score="0.996"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="46202" i_stop="46507" i_length="306">
            <donor d_prob="0.000" d_score="0.98"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="46508" g_stop="46528" g_length="21"/>
          <reference_exon_boundary r_type="cDNA" r_start="579" r_stop="599" r_length="21" r_score="0.667"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="46529" i_stop="46654" i_length="126">
            <donor d_prob="0.000" d_score="0.00"/>
            <acceptor a_prob="0.745" a_score="0.50"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="46655" g_stop="46724" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="600" r_stop="663" r_length="64" r_score="0.500"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="46725" i_stop="46888" i_length="164">
            <donor d_prob="0.561" d_score="0.48"/>
            <acceptor a_prob="0.798" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="46889" g_stop="46912" g_length="24"/>
          <reference_exon_boundary r_type="cDNA" r_start="664" r_stop="687" r_length="24" r_score="0.542"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="46913" i_stop="47100" i_length="188">
            <donor d_prob="0.000" d_score="0.00"/>
            <acceptor a_prob="0.866" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="47101" g_stop="47123" g_length="23"/>
          <reference_exon_boundary r_type="cDNA" r_start="688" r_stop="710" r_length="23" r_score="0.652"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C00HBa0081D06.1" gen_strand="+" ref_id="SGN-U313047" ref_strand="+">
        <total_alignment_score>0.941</total_alignment_score>
        <cumulative_length_of_scored_exons>700</cumulative_length_of_scored_exons>
        <coverage percentage="0.986" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C00HBa0081D06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U313047" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="44139" e_stop="44223"/>
          <exon e_start="44472" e_stop="44607"/>
          <exon e_start="44722" e_stop="44823"/>
          <exon e_start="45963" e_stop="46201"/>
          <exon e_start="46508" e_stop="46528"/>
          <exon e_start="46655" e_stop="46724"/>
          <exon e_start="46889" e_stop="46912"/>
          <exon e_start="47101" e_stop="47123"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATAAGCACTGCCTAGATCGCCGCAGTTCTCAGTTGAGAAAGCTCAGGAGGAGGTCGCTAGGGTTTCTGCAACTGTAGCGTAATGGTAAGTGAAGCTAACTCTTTCATCCTTTTTCCTGTTAACGTATACCTTTTCGTTTTCCTCATCGAATTGGTAGAAATCACAAATCACGAAATGGTTCGAAAACTAAAATTGAATGGAACTACAGTGAATATTGAAGAATGACCTGCACAGATAAAAAAAATGGTTCTGATTATAGAAAAGTAGTGCATATGTTTTTGTAAGTTCGCTAAAGGTGATCTGTAATTGAACGTGTGGATTTTACTATATAGGGTAAGGGAACAGGAAGCTTCGGTAAGAGGAGGAACAAGACCCACACACTATGTGTGAGGTGTGGAAGACGGAGCTTCCATCTCCAGAAGAGCCGTTGCTCTGCTTGTGCTTACCCTGCTGCCCGTAAAAGGACATGTAATACTTATAATCCTAACACTTGTAATATTATACATTATATCAGAATATCAATCCTCTGATAGGAGTTGTACTCTCTTTTTTTACATGCTTTTCTGAATGAATGATTTGCAGACAACTGGAGTGTGAAGGCTATCCGCAGAAAGACAACTGGAACTGGCCGCATGAGGTATCTTCGTAACGTCCCTCGCAGGTTCAAGACCAATTTCAGAGAAGGTACACATATTATAGTGTTTCTGCATTTTAAGATTTGCTAATTTACTTTTTATTTAGGATTGAGTGTGCCTTTGGTATGGATAACATTGTTTATAGAATTTATGAAATCATTTTCGAGTGATTGCTTACTTCTAAAATGGGAAACCTTATTTCCTCTAGTTATAGACAAAAGTCATTTTACTTTACAGATATCCCATATACTTGCCTAGACAAATATTTAGATATTGTTTTCAACCTTCATTGCTAATATGACTACTACCTCTTTCTCATCTGTTAAGTTGTTCAACTGGGCACAATGTTTAAGAAGTTTAAAAAATAATGTGTTTTTAAAGATAGAAAGTTGTCGATTCCTTTCCTTTTTAGAAAGAAAGTGTCACATAACCAGGGGTTGATGAGAGTAATAAATGCTATTGATGTACATTGTCTTCCACTTTGTATGAGTGAGGTACCATGCAGTTATAGTACACGCTGTGACTACCCTTTTACCTTGACTGATGTTGCATATTGCACCCTTGGTCTATAGTAAATTGAGGGGTTGTTGGGTAGTTGGGTAGAGTTATGCAGTTATTCCAATGCAATAATTAGTGGTGAAGGAATTTATGTGTTATTTTATATAGGTATTTATTTATGTCTTTTAATTACACCTTTTATCTAGCATATTATAGTACTTAGATTCCTTCATAACTTGTGCATATATTTTTTATCTGGTTTTCTAAAATGGAAACCAGACACAATATTAGTTTTTAACATGAATACCTTACCTTCTAACCAGTTACCAAACATACTATTACTTGCACATATCTGTATATCTAACCTCCAAACCAGCTATCAAGCAAGTCCAAGTGTTTATAATTAGTTCCAAGAAACCAGAACTGAATACCTAAAATAGTTTTAGTAAATTAATTTCAAGATAAAGCTGTTTTCACTCAGTATTTCCCCCCTAACCAATGTACCTATTGGTGTTTTAAGTTGACTACATATTAGTTGAGCTTAAAAGATGCACACCTATAATTCCGTGTGATTGTTCCTTTGTTTAGCTTGTCTGAGTTTGTGTAGTAGACATTGCCAATTGGTCATCAAGAATATCTGGTAATAACAAGTATGAGATAATAATAAAATTCGTACGCTTGTTCGTCCAGGTACTGAAGCAGCTCCAAGGAAGAAGGGAGTAGCTTCTGCTTGAGGCCTTCGAGACAGTTACTTGAGAGGCTATTAGTGGTAGCTTCATTTTGATATTTCAAGTGTTAGAGCAAGTAAAATTTTGGGACCTTCTATCTTAGTTTTTATTGCCCTTTGAAAGATTAATGTGCTTAAAATTTTAAAAGTATGTGTTCCAACTTGGCATTTTTATAAAGAACGGATCTTGAGACTTCCATAACTTGTTGGATCTGATCTACCTGTCTAGTTTTTATCTTACCTTGTGGTTGCCCTTTTTGAATCTGTTGATGTTGAAATGATTCCATTTATTTTATTGTTACCTTGAGGTTGTTCAACTTGCTTATTTCAAATCTGGTGCTGTATGAATAAACGACGCCCAATGTGCTGTTCTTTTATTCTGATTTGCCTGATCCGGTTCTTAGTATGGTGATGTTACCTGTTAAATGTTAGCATAGATGATTAGTTTAGCTTGCAGTATGAATTCAAATGTATGTCTCTGAAGTCTTGCGTTTCTTTCTTGGTTACTGAAACAATGCAAAGAAAAACAGTGTGGCATATTGCGCGGCTGGGATCACCATTAAATACAAAGTAGTACTGGAAATTATTCTCATGATAAAAGAAATTTCTCTCTGATCTTGTCTCCTTTTTTTCTTTGAAGTTCTCTTGTTTTCAGGAAAATGAAGTTATAGCGATGTGTTTTTTTTTGGAGTTGTAGGTTAACTGAACTAACTTTAGGCTACAAGGTGATTTGAGTTATTCACCAATTATCTCCCATGACATTTTTTTTTCTCAAATGAGTCGACTCCTATAATGGAATCTTTCAGTGCAATGTTTATATTTCCGTCATGGTGCTAATAAATAATTTCTACATCTGATGTTAGAAATACACAATGTTGCTAGTTGCTAGATGGTGTTGAGGGCATCGAATTGGGTTGAAGGTAAGGCGTCTAAAATTTCAAATAGTCTTGTAAAATTTTTAATGAAAGAAGTCTTTACTGTAAGGCGTTTAAAATCTCAATAGTCTTGTAAAATTGTTAAATGAAAGAAGTCGCAGTAGCAAAGGGGTAACAACCAGGCCATGACATTTAACTCTTCCTGTAAAAATGAAATATTCCTCAGGCCGCCTTGAGCGATGCAACGTA</genome_strand>
        <mrna_strand>GATAAGCACTGCCTAGATCGCCGCAGTTCTCAGTTGAGAAAGCTCAGGAGGAGGTCGCTAGGGTTTCTGCAACTGTAGCGTAATG........................................................................................................................................................................................................................................................GGTAAGGGAACAGGAAGCTTCGGTAAGAGGAGGAACAAGACCCACACACTATGTGTGAGGTGTGGAAGACGGAGCTTCCATCTCCAGAAGAGCCGTTGCTCTGCTTGTGCTTACCCTGCTGCCCGTAAAAGGACAT..................................................................................................................ACAACTGGAGTGTGAAGGCTATCCGCAGAAAGACAACTGGAACTGGCCGCATGAGGTATCTTCGTAACGTCCCTCGCAGGTTCAAGACCAATTTCAGAGAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACTGAAGCAGCTCCAAGGAAGAAGGGAGTAGCTTCTGCTTGAGGCCTTCGAGACAGTTACTTGAGAGGCTATTAGTGGTAGCTTCATTTTGATATTTCAAGTGTTAGAGCAAGTAAAATTTTGGGACCTTCTATCTTAGTTTTTATTGCCCTTTGAAAGATTAATGTGCTTAAAATTTTAAAAGTATGTGTTCCAACTTGGCATTTTTATAAAGAACGGATCTTGAGACTTCCAAAA..................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAA..............................................................................................................................AAAAAAAAAACTCGAG-GTTGTG-TTGGAGTTGGAGAAATTAG-AGGGGGAGATTTCTCT-GTCT-C-TG....................................................................................................................................................................ATGGTCTTGTTTGCCCCAAACCTC............................................................................................................................................................................................GCCGGAATGGGCTTTTCAACGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C00HBa0081D06-3cnAc/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U334089" ref_strand="+" ref_description="SGN-U334089        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: | Symbol: None | 60S ribosomal protein L37 (RPL37B), similar to SP:Q43292 from (Arabidopsis thaliana) | chr1:19478716-19479887 REVERSE | Aliases: F19K6.12, F19K6_12(evalue: 2e-46, score=183) genbank/nr: gi|15218208|ref|NP_175640.1| 60S ribosomal protein L37 (RPL37B) [Arabidopsis thaliana] gi|20143906|sp|Q43292|RL37_ARATH 60S ribosomal protein L37 gi|25295102|pir||B96563 hypothetical protein F19K6.12 [imported] - Arabidopsis thaliana gi|12323122|gb|AAG51542.1| 60S ribosomal protein L37, putative; 56921-57860 [Arabidopsis thaliana] gi|13877907|gb|AAK44031.1| putative 60S ribosomal protein L37 [Arabidopsis thaliana] gi|21280805|gb|AAM44969.1| putative 60S ribosomal protein L37 [Arabidopsis thaliana](evalue: 1e-44, score=183)">
      <seq>caggaggtcgctagggtttctgcaactgtagcgtaatgggtaagggaacaggaagcttcggtaagaggaggaacaagacccacacactatgtgtgaggtgtggaagacggagcttccatctccaaaagagccgttgctctgcttgtgcttaccctgctgcccgtaaaaggacatacaactggagtgtgaaggctatccgcagaaagacaactggaactggccgcatgaggtatcttcgtaacgtccctcgcaggttcaagaccaatttcggagaaggtactgaagcagctccaaggaagaagggagtagcttctgcttgaggccttcgagacagttacttgagaggctattagtggtagcttcattttgatatttcaagtgttagagcaagtaaaattttgggaccttctatcttagtttttattgccctttgaaagattaatgtgcttaaaattttaaaagtatgtgttccaacttggcatttttataaagaacggatcttgagacttccataggtcttgttctcgctctctgaattccgccaggaatgtacctttggggggggcgatttgcccgttttccccgcattgggttgattttaaaatctgcaattttaatttgggaccatgaggaatgggatatccttgtactggttatggtgttttaatatattatgtgatacgcgatgtatttggtttgcaataaaagcacttgttggtttttttgaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C00HBa0081D06-3cnAc/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C00HBa0081D06.1" temp_strand="+" temp_description="C00HBa0081D06.1  AC218144.2 htgs_phase:3 submitted_to_sgn_as:C12HBa0081D06">
        <position start="43887" stop="75702"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="44186" g_stop="44223" g_length="38"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="38" r_length="38" r_score="0.974"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="44224" i_stop="44471" i_length="248">
            <donor d_prob="1.000" d_score="0.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="44472" g_stop="44607" g_length="136"/>
          <reference_exon_boundary r_type="cDNA" r_start="39" r_stop="174" r_length="136" r_score="0.993"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="44608" i_stop="44721" i_length="114">
            <donor d_prob="0.995" d_score="0.98"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="44722" g_stop="44823" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="175" r_stop="276" r_length="102" r_score="0.990"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="44824" i_stop="45962" i_length="1139">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.958" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="45963" g_stop="46214" g_length="252"/>
          <reference_exon_boundary r_type="cDNA" r_start="277" r_stop="526" r_length="250" r_score="0.972"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="46215" i_stop="46605" i_length="391">
            <donor d_prob="0.000" d_score="0.86"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="46606" g_stop="46618" g_length="13"/>
          <reference_exon_boundary r_type="cDNA" r_start="527" r_stop="539" r_length="13" r_score="0.692"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="46619" i_stop="46696" i_length="78">
            <donor d_prob="0.900" d_score="0.00"/>
            <acceptor a_prob="0.688" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="46697" g_stop="46724" g_length="28"/>
          <reference_exon_boundary r_type="cDNA" r_start="540" r_stop="567" r_length="28" r_score="0.393"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="46725" i_stop="46888" i_length="164">
            <donor d_prob="0.561" d_score="0.00"/>
            <acceptor a_prob="0.798" a_score="0.54"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="46889" g_stop="46943" g_length="55"/>
          <reference_exon_boundary r_type="cDNA" r_start="568" r_stop="620" r_length="53" r_score="0.545"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="46944" i_stop="47100" i_length="157">
            <donor d_prob="0.000" d_score="0.56"/>
            <acceptor a_prob="0.866" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="47101" g_stop="47120" g_length="20"/>
          <reference_exon_boundary r_type="cDNA" r_start="621" r_stop="640" r_length="20" r_score="0.550"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="47121" i_stop="47391" i_length="271">
            <donor d_prob="0.535" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="47392" g_stop="47404" g_length="13"/>
          <reference_exon_boundary r_type="cDNA" r_start="641" r_stop="653" r_length="13" r_score="0.769"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="47405" i_stop="47475" i_length="71">
            <donor d_prob="0.900" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="47476" g_stop="47486" g_length="11"/>
          <reference_exon_boundary r_type="cDNA" r_start="654" r_stop="663" r_length="10" r_score="0.636"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="47487" i_stop="47832" i_length="346">
            <donor d_prob="0.900" d_score="0.00"/>
            <acceptor a_prob="0.594" a_score="0.44"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="47833" g_stop="47880" g_length="48"/>
          <reference_exon_boundary r_type="cDNA" r_start="664" r_stop="711" r_length="48" r_score="0.438"/>
        </exon>
        <intron i_serial="11">
          <gDNA_intron_boundary i_start="47881" i_stop="48193" i_length="313">
            <donor d_prob="0.997" d_score="0.44"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="12">
          <gDNA_exon_boundary g_start="48194" g_stop="48224" g_length="31"/>
          <reference_exon_boundary r_type="cDNA" r_start="712" r_stop="742" r_length="31" r_score="0.742"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C00HBa0081D06.1" gen_strand="+" ref_id="SGN-U334089" ref_strand="+">
        <total_alignment_score>0.938</total_alignment_score>
        <cumulative_length_of_scored_exons>747</cumulative_length_of_scored_exons>
        <coverage percentage="1.007" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C00HBa0081D06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U334089" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="44186" e_stop="44223"/>
          <exon e_start="44472" e_stop="44607"/>
          <exon e_start="44722" e_stop="44823"/>
          <exon e_start="45963" e_stop="46214"/>
          <exon e_start="46606" e_stop="46618"/>
          <exon e_start="46697" e_stop="46724"/>
          <exon e_start="46889" e_stop="46943"/>
          <exon e_start="47101" e_stop="47120"/>
          <exon e_start="47392" e_stop="47404"/>
          <exon e_start="47476" e_stop="47486"/>
          <exon e_start="47833" e_stop="47880"/>
          <exon e_start="48194" e_stop="48224"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGGAGGTCGCTAGGGTTTCTGCAACTGTAGCGTAATGGTAAGTGAAGCTAACTCTTTCATCCTTTTTCCTGTTAACGTATACCTTTTCGTTTTCCTCATCGAATTGGTAGAAATCACAAATCACGAAATGGTTCGAAAACTAAAATTGAATGGAACTACAGTGAATATTGAAGAATGACCTGCACAGATAAAAAAAATGGTTCTGATTATAGAAAAGTAGTGCATATGTTTTTGTAAGTTCGCTAAAGGTGATCTGTAATTGAACGTGTGGATTTTACTATATAGGGTAAGGGAACAGGAAGCTTCGGTAAGAGGAGGAACAAGACCCACACACTATGTGTGAGGTGTGGAAGACGGAGCTTCCATCTCCAGAAGAGCCGTTGCTCTGCTTGTGCTTACCCTGCTGCCCGTAAAAGGACATGTAATACTTATAATCCTAACACTTGTAATATTATACATTATATCAGAATATCAATCCTCTGATAGGAGTTGTACTCTCTTTTTTTACATGCTTTTCTGAATGAATGATTTGCAGACAACTGGAGTGTGAAGGCTATCCGCAGAAAGACAACTGGAACTGGCCGCATGAGGTATCTTCGTAACGTCCCTCGCAGGTTCAAGACCAATTTCAGAGAAGGTACACATATTATAGTGTTTCTGCATTTTAAGATTTGCTAATTTACTTTTTATTTAGGATTGAGTGTGCCTTTGGTATGGATAACATTGTTTATAGAATTTATGAAATCATTTTCGAGTGATTGCTTACTTCTAAAATGGGAAACCTTATTTCCTCTAGTTATAGACAAAAGTCATTTTACTTTACAGATATCCCATATACTTGCCTAGACAAATATTTAGATATTGTTTTCAACCTTCATTGCTAATATGACTACTACCTCTTTCTCATCTGTTAAGTTGTTCAACTGGGCACAATGTTTAAGAAGTTTAAAAAATAATGTGTTTTTAAAGATAGAAAGTTGTCGATTCCTTTCCTTTTTAGAAAGAAAGTGTCACATAACCAGGGGTTGATGAGAGTAATAAATGCTATTGATGTACATTGTCTTCCACTTTGTATGAGTGAGGTACCATGCAGTTATAGTACACGCTGTGACTACCCTTTTACCTTGACTGATGTTGCATATTGCACCCTTGGTCTATAGTAAATTGAGGGGTTGTTGGGTAGTTGGGTAGAGTTATGCAGTTATTCCAATGCAATAATTAGTGGTGAAGGAATTTATGTGTTATTTTATATAGGTATTTATTTATGTCTTTTAATTACACCTTTTATCTAGCATATTATAGTACTTAGATTCCTTCATAACTTGTGCATATATTTTTTATCTGGTTTTCTAAAATGGAAACCAGACACAATATTAGTTTTTAACATGAATACCTTACCTTCTAACCAGTTACCAAACATACTATTACTTGCACATATCTGTATATCTAACCTCCAAACCAGCTATCAAGCAAGTCCAAGTGTTTATAATTAGTTCCAAGAAACCAGAACTGAATACCTAAAATAGTTTTAGTAAATTAATTTCAAGATAAAGCTGTTTTCACTCAGTATTTCCCCCCTAACCAATGTACCTATTGGTGTTTTAAGTTGACTACATATTAGTTGAGCTTAAAAGATGCACACCTATAATTCCGTGTGATTGTTCCTTTGTTTAGCTTGTCTGAGTTTGTGTAGTAGACATTGCCAATTGGTCATCAAGAATATCTGGTAATAACAAGTATGAGATAATAATAAAATTCGTACGCTTGTTCGTCCAGGTACTGAAGCAGCTCCAAGGAAGAAGGGAGTAGCTTCTGCTTGAGGCCTTCGAGACAGTTACTTGAGAGGCTATTAGTGGTAGCTTCATTTTGATATTTCAAGTGTTAGAGCAAGTAAAATTTTGGGACCTTCTATCTTAGTTTTTATTGCCCTTTGAAAGATTAATGTGCTTAAAATTTTAAAAGTATGTGTTCCAACTTGGCATTTTTATAAAGAACGGATCTTGAGACTTCCATAACTTGTTGGATCTGATCTACCTGTCTAGTTTTTATCTTACCTTGTGGTTGCCCTTTTTGAATCTGTTGATGTTGAAATGATTCCATTTATTTTATTGTTACCTTGAGGTTGTTCAACTTGCTTATTTCAAATCTGGTGCTGTATGAATAAACGACGCCCAATGTGCTGTTCTTTTATTCTGATTTGCCTGATCCGGTTCTTAGTATGGTGATGTTACCTGTTAAATGTTAGCATAGATGATTAGTTTAGCTTGCAGTATGAATTCAAATGTATGTCTCTGAAGTCTTGCGTTTCTTTCTTGGTTACTGAAACAATGCAAAGAAAAACAGTGTGGCATATTGCGCGGCTGGGATCACCATTAAATACAAAGTAGTACTGGAAATTATTCTCATGATAAAAGAAATTTCTCTCTGATCTTGTCTCCTTTTTTTCTTTGAAGTTCTCTTGTTTTCAGGAAAATGAAGTTATAGCGATGTGTTTTTTTTTGGAGTTGTAGGTTAACTGAACTAACTTTAGGCTACAAGGTGATTTGAGTTATTCACCAATTATCTCCCATGACATTTTTTTTTCTCAAATGAGTCGACTCCTATAATGGAATCTTTCAGTGCAATGTTTATATTTCCGTCATGGTGCTAATAAATAATTTCTACATCTGATGTTAGAAATACACAATGTTGCTAGTTGCTAGATGGTGTTGAGGGCATCGAATTGGGTTGAAGGTAAGGCGTCTAAAATTTCAAATAGTCTTGTAAAATTTTTAATGAAAGAAGTCTTTACTGTAAGGCGTTTAAAATCTCAATAGTCTTGTAAAATTGTTAAATGAAAGAAGTCGCAGTAGCAAAGGGGTAACAACCAGGCCATGACATTTAACTCTTCCTGTAAAAATGAAATATTCCTCAGGCCGCCTTGAGCGATGCAACGTACCAACTGAACCGCGTAAATTTAATGATAAATAACTCTTCTTGCTTCTATGTAATTTATAATTTTTTTTTTAAAAAAAAATAGAATAATTTTAATCTTATAAAAATGTTTATGTGAGTACAAATCCTCTAAATGAAAATAGATGATCCTCGTAAAAAGTCATAACTCATAATCAATCTCAACTAGTTTAGGATCACACACAATTAATTGATTAACAAATAAATATATAAATCATGACTGTACTGATTCACATTATAGCAAAACTTCCGAATACTATTACTGGATATCATTACCTCGAAAATAAAGAAATAACCTCTAAGGAAATTAAGAAAAATAAATTTTGTAAGTGACACTTTATACTGATCGTCTCCTTTACCCTTCAACACCATGACCCATGTCCCTGTCCATCCCACCTTGGAGTGATACTTTGCGTTCACTAAGCAAACATAAATAAATAAATACCAAAAAACATTTATTTTTCGAAAAAACATTTTTACTAAAGTCTTCTCCTAGCGACTAAGGAACATTTTAGGAGGAAATACTGCACACGTTTGATTTGAACTTATCTTGACCACCTTTTAATTAAGTTGGGTGGCCTGACTTTAAAAGCAAAACAGACTCATTCATTGTCTTATAACAACCAGCCAATAACGAGCGAACAAATGTACAAACGCAATTACACAAATACATAATTGCATTTTGTATAATTAGTCAAAGCAAGAGGCCAGTCCTGTTTCTATCATTCTTCAAAACAAACATGCACACCACGTTCTTCCAACCATTCACTTAAACTAAGAATTAAACACCAAAACATCCTCTCCACAATTTATCCATCAACAAAACACTTTGCCTCTATCCCTTCCTCTCTGTACCTGCACAAACACAATCAAAAATTTTCATTCTTTTTCACCTCATAAACAAACCCCATTTCATTAACTTTCTTGTTATAAGTACCATTTTTATAGAATGTGTTAATCATGATTCTTGAGACGAACAATAATTCAATGGCTGGATTCAAGTCACGTTTGGCTAACGATTCAACGGTCACTAGCCCTCGTTCAGGTAAGTCATTTTCTTCCCTTTTTAGAAAAATCACAAAAAAA</genome_strand>
        <mrna_strand>CAGGAGGTCGCTAGGGTTTCTGCAACTGTAGCGTAATG........................................................................................................................................................................................................................................................GGTAAGGGAACAGGAAGCTTCGGTAAGAGGAGGAACAAGACCCACACACTATGTGTGAGGTGTGGAAGACGGAGCTTCCATCTCCAAAAGAGCCGTTGCTCTGCTTGTGCTTACCCTGCTGCCCGTAAAAGGACAT..................................................................................................................ACAACTGGAGTGTGAAGGCTATCCGCAGAAAGACAACTGGAACTGGCCGCATGAGGTATCTTCGTAACGTCCCTCGCAGGTTCAAGACCAATTTCGGAGAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACTGAAGCAGCTCCAAGGAAGAAGGGAGTAGCTTCTGCTTGAGGCCTTCGAGACAGTTACTTGAGAGGCTATTAGTGGTAGCTTCATTTTGATATTTCAAGTGTTAGAGCAAGTAAAATTTTGGGACCTTCTATCTTAGTTTTTATTGCCCTTTGAAAGATTAATGTGCTTAAAATTTTAAAAGTATGTGTTCCAACTTGGCATTTTTATAAAGAACGGATCTTGAGACTTCCAT-AGGTCTT-GTTCTC.......................................................................................................................................................................................................................................................................................................................................................................................................GCTCTCTGAATTC..............................................................................CGCCAGGAATGTACCTTTGGGGGGGGCG....................................................................................................................................................................ATTTGCCCGTTTTCCCCGCATTGGGTTGATTTTAA--AATCTGCAATTTTAATTT.............................................................................................................................................................GGGACCATGAGGAATGGGAT...............................................................................................................................................................................................................................................................................ATCCTTGTACTGG.......................................................................TTATGGTG-TT..........................................................................................................................................................................................................................................................................................................................................................TTAATATATTATGTGATACGCGATGTATTTGGTTTGCAATAAAAGCAC.........................................................................................................................................................................................................................................................................................................................TTGTTGGTTTTTTTGAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C00HBa0081D06-3cnAc/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U313042" ref_strand="+" ref_description="SGN-U313042        Tomato 200607 #1 [3 ESTs aligned] arabidopsis/peptide: | Symbol: None | 60S ribosomal protein L37 (RPL37C), similar to ribosomal protein L37 GB:BAA04888 from (Homo sapiens) | chr3:5454824-5455933 FORWARD | Aliases: MSL1.12(evalue: 2e-43, score=172) genbank/nr: gi|18401007|ref|NP_566535.1| 60S ribosomal protein L37 (RPL37C) [Arabidopsis thaliana] gi|21553481|gb|AAM62574.1| putative ribosomal protein [Arabidopsis thaliana](evalue: 1e-41, score=172)">
      <seq>ctgtagcgtaatgggtaagggaacaggaagcttcggtaagaggaggaacaagacccacacactatgtgtgaggtgtggaagacggagcttccatctccagaagagccgttgctctgcttgtgcttaccctgctgcccgtaaaaggacatacaactggagtgtgaaggctatccgcagaaagacaactggaactggccgcatgaggtatcttcgtaacgtccctcgcaggttcaagaccaatttcagagaaggtacacatattatagtgtttctgcattttaagatttgctaatttactttttatttaggattgagtgtgcctttggtatggataacattgtttatagaatttatgaaatcattttcgagtgattgcttacttctaaaatgggaaaccttatttcctctagttatagacaaaagtcattttactttacagatatcccatatacttgcctagaccaatatttagatattgttttcaaccttcattgctaatatgactactacctctttctcatctgttaagttgttcaactgggcacaatgtttaagaagtttaaaaaataatgtgtttttaaagatagaaagttgtcgattcctttccttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C00HBa0081D06-3cnAc/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C00HBa0081D06.1" temp_strand="+" temp_description="C00HBa0081D06.1  AC218144.2 htgs_phase:3 submitted_to_sgn_as:C12HBa0081D06">
        <position start="44160" stop="45482"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="44211" g_stop="44223" g_length="13"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="13" r_length="13" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="44224" i_stop="44471" i_length="248">
            <donor d_prob="1.000" d_score="0.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="44472" g_stop="44607" g_length="136"/>
          <reference_exon_boundary r_type="cDNA" r_start="14" r_stop="149" r_length="136" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="44608" i_stop="44721" i_length="114">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="44722" g_stop="45182" g_length="461"/>
          <reference_exon_boundary r_type="cDNA" r_start="150" r_stop="610" r_length="461" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C00HBa0081D06.1" gen_strand="+" ref_id="SGN-U313042" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>610</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C00HBa0081D06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U313042" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="44211" e_stop="44223"/>
          <exon e_start="44472" e_stop="44607"/>
          <exon e_start="44722" e_stop="45182"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGTAGCGTAATGGTAAGTGAAGCTAACTCTTTCATCCTTTTTCCTGTTAACGTATACCTTTTCGTTTTCCTCATCGAATTGGTAGAAATCACAAATCACGAAATGGTTCGAAAACTAAAATTGAATGGAACTACAGTGAATATTGAAGAATGACCTGCACAGATAAAAAAAATGGTTCTGATTATAGAAAAGTAGTGCATATGTTTTTGTAAGTTCGCTAAAGGTGATCTGTAATTGAACGTGTGGATTTTACTATATAGGGTAAGGGAACAGGAAGCTTCGGTAAGAGGAGGAACAAGACCCACACACTATGTGTGAGGTGTGGAAGACGGAGCTTCCATCTCCAGAAGAGCCGTTGCTCTGCTTGTGCTTACCCTGCTGCCCGTAAAAGGACATGTAATACTTATAATCCTAACACTTGTAATATTATACATTATATCAGAATATCAATCCTCTGATAGGAGTTGTACTCTCTTTTTTTACATGCTTTTCTGAATGAATGATTTGCAGACAACTGGAGTGTGAAGGCTATCCGCAGAAAGACAACTGGAACTGGCCGCATGAGGTATCTTCGTAACGTCCCTCGCAGGTTCAAGACCAATTTCAGAGAAGGTACACATATTATAGTGTTTCTGCATTTTAAGATTTGCTAATTTACTTTTTATTTAGGATTGAGTGTGCCTTTGGTATGGATAACATTGTTTATAGAATTTATGAAATCATTTTCGAGTGATTGCTTACTTCTAAAATGGGAAACCTTATTTCCTCTAGTTATAGACAAAAGTCATTTTACTTTACAGATATCCCATATACTTGCCTAGACAAATATTTAGATATTGTTTTCAACCTTCATTGCTAATATGACTACTACCTCTTTCTCATCTGTTAAGTTGTTCAACTGGGCACAATGTTTAAGAAGTTTAAAAAATAATGTGTTTTTAAAGATAGAAAGTTGTCGATTCCTTTCCTTT</genome_strand>
        <mrna_strand>CTGTAGCGTAATG........................................................................................................................................................................................................................................................GGTAAGGGAACAGGAAGCTTCGGTAAGAGGAGGAACAAGACCCACACACTATGTGTGAGGTGTGGAAGACGGAGCTTCCATCTCCAGAAGAGCCGTTGCTCTGCTTGTGCTTACCCTGCTGCCCGTAAAAGGACAT..................................................................................................................ACAACTGGAGTGTGAAGGCTATCCGCAGAAAGACAACTGGAACTGGCCGCATGAGGTATCTTCGTAACGTCCCTCGCAGGTTCAAGACCAATTTCAGAGAAGGTACACATATTATAGTGTTTCTGCATTTTAAGATTTGCTAATTTACTTTTTATTTAGGATTGAGTGTGCCTTTGGTATGGATAACATTGTTTATAGAATTTATGAAATCATTTTCGAGTGATTGCTTACTTCTAAAATGGGAAACCTTATTTCCTCTAGTTATAGACAAAAGTCATTTTACTTTACAGATATCCCATATACTTGCCTAGACCAATATTTAGATATTGTTTTCAACCTTCATTGCTAATATGACTACTACCTCTTTCTCATCTGTTAAGTTGTTCAACTGGGCACAATGTTTAAGAAGTTTAAAAAATAATGTGTTTTTAAAGATAGAAAGTTGTCGATTCCTTTCCTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C00HBa0081D06-3cnAc/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U312347" ref_strand="+" ref_description="SGN-U312347        Tomato 200607 #1 [21 ESTs aligned] arabidopsis/peptide: | Symbol: None | photosystem I reaction center subunit VI, chloroplast, putative / PSI-H, putative (PSAH2), identical to SP:Q9SUI6; similar to PSI-H precursor (Nicotiana sylvestris) GI:407355; contains Pfam profile PF03244: Photosystem I reaction centre subunit VI | chr1:19458505-19459337 FORWARD | Aliases: F9I5.11, F9I5_11(evalue: 4e-43, score=171) genbank/nr: gi|407353|dbj|BAA04633.1| PSI-H precursor [Nicotiana sylvestris] (evalue: 3e-52, score=207)">
      <seq>taatttcctagtctgaagcagagcccaataatggcgtctatggcaactcttactgcagtaaagcccaccagtagtgtcaagggcctagctggaagctccattgctggaactaagctgaatgttaaatcatctcgcctcaatgtgaagcaatctaaatccagggctggtgctgtggttgcaaaatatggtgacaagagtgtatattttgacttggaggatttgggcaacacaactggtcagtgggacttgtatggatcagatgctccttcaccttacaactcccttcagagcaagttctttgagacatttgctgctcctttcacaaagagaggtctgttgctcaagttcttgatattgggaggtggctcaactcttgcttacttcagttcaactgcatcaggagatatcctaccaatcaagaaaggcccccaacttccaccaaagctcggtccacgtggcaagatctaattgcttcccaatcaaaatttctttaccttcattttgttattgatgtatcatctatataacagcttgtaagtgtacattaaagcttacctcagacctctgttacaacaagataaatcttctggaaaaaaaaagttcaaagcattgctttcgaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C00HBa0081D06-3cnAc/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C00HBa0081D06.1" temp_strand="-" temp_description="C00HBa0081D06.1  AC218144.2 htgs_phase:3 submitted_to_sgn_as:C12HBa0081D06">
        <position start="52848" stop="50970"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="52548" g_stop="52388" g_length="161"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="161" r_length="161" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="52387" i_stop="51903" i_length="485">
            <donor d_prob="0.970" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="51902" g_stop="51776" g_length="127"/>
          <reference_exon_boundary r_type="cDNA" r_start="162" r_stop="288" r_length="127" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="51775" i_stop="51596" i_length="180">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.956" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="51595" g_stop="51291" g_length="305"/>
          <reference_exon_boundary r_type="cDNA" r_start="289" r_stop="593" r_length="305" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="619" polyA_stop="630"/>
      <MATCH_line gen_id="C00HBa0081D06.1" gen_strand="-" ref_id="SGN-U312347" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>593</cumulative_length_of_scored_exons>
        <coverage percentage="0.941" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C00HBa0081D06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U312347" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="52548" e_stop="52388"/>
          <exon e_start="51902" e_stop="51776"/>
          <exon e_start="51595" e_stop="51291"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAATTTCCTAGTCTGAAGCAGAGCCCAATAATGGCGTCTATGGCAACTCTTACTGCAGTAAAGCCCACCAGTAGTGTCAAGGGCCTAGCTGGAAGCTCCATTGCTGGAACTAAGCTGAATGTTAAATCATCTCGCCTCAATGTGAAGCAATCTAAATCCAGGTAAGGTACTGGATGGCCGATGTCTCGGATTTTAGTAGCCCGTTTGATCAATATCTGCTTATTTCAATTTTAGGAAGTCTTATTGTTTTAGCAATTTGTGTTTGACGAATCAACTTGCAAAGCAATTTGTCAATATTAGAAAAAACAGTTGTGTTTGACTGATTAACGCTCCAAAACTTCAATTTCTGAAAAACAACTTCTATTACTGCTCACAACTACTTATTTATTCCTAAAATGTTTAGCCAAGCAACTTGGACTTTAGTTTGGTTAGTGGTGAAGTTAAAGATTGAATTAGTTTTTTTCTTAATAACCATGGTGTGTGTTCGACTACCTGTTACCTCCCACCAATATCGGTTTATCTGAGGATGTTAAGAAATGTTATTATATACATTTGAGCTTTCGAAGATGGAAATTAAAGATGAGTTATAGGCCTGTCAGCATTTATATATTTTTTTGCTTCGACTGATTATGATAGTTTTGTGTAGGGCTGGTGCTGTGGTTGCAAAATATGGTGACAAGAGTGTATATTTTGACTTGGAGGATTTGGGCAACACAACTGGTCAGTGGGACTTGTATGGATCAGATGCTCCTTCACCTTACAACTCCCTTCAGGTGTCATTTGTCTTTCTCCCCTTAGAGAAAAGAAAATTTCACATTCTTTATCTCAAAAATGTTTCATTAGTTGTTTTGTGCATGTTAGCTCATAGTTGACTAGCTAGTTTCAGCATCGATTATTCGCCAGAACATTACTGAGTCATAACTGTCTTTCTCCTATTATTTTGTATTTGGTAGAGCAAGTTCTTTGAGACATTTGCTGCTCCTTTCACAAAGAGAGGTCTGTTGCTCAAGTTCTTGATATTGGGAGGTGGCTCAACTCTTGCTTACTTCAGTTCAACTGCATCAGGAGATATCCTACCAATCAAGAAAGGCCCCCAACTTCCACCAAAGCTCGGTCCACGTGGCAAGATCTAATTGCTTCCCAATCAAAATTTCTTTACCTTCATTTTGTTATTGATGTATCATCTATATAACAGCTTGTAAGTGTACATTAAAGCTTACCTCAGACCTCTGTTACAACAAGATAAATCTTCTGGAAA</genome_strand>
        <mrna_strand>TAATTTCCTAGTCTGAAGCAGAGCCCAATAATGGCGTCTATGGCAACTCTTACTGCAGTAAAGCCCACCAGTAGTGTCAAGGGCCTAGCTGGAAGCTCCATTGCTGGAACTAAGCTGAATGTTAAATCATCTCGCCTCAATGTGAAGCAATCTAAATCCAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCTGGTGCTGTGGTTGCAAAATATGGTGACAAGAGTGTATATTTTGACTTGGAGGATTTGGGCAACACAACTGGTCAGTGGGACTTGTATGGATCAGATGCTCCTTCACCTTACAACTCCCTTCAG....................................................................................................................................................................................AGCAAGTTCTTTGAGACATTTGCTGCTCCTTTCACAAAGAGAGGTCTGTTGCTCAAGTTCTTGATATTGGGAGGTGGCTCAACTCTTGCTTACTTCAGTTCAACTGCATCAGGAGATATCCTACCAATCAAGAAAGGCCCCCAACTTCCACCAAAGCTCGGTCCACGTGGCAAGATCTAATTGCTTCCCAATCAAAATTTCTTTACCTTCATTTTGTTATTGATGTATCATCTATATAACAGCTTGTAAGTGTACATTAAAGCTTACCTCAGACCTCTGTTACAACAAGATAAATCTTCTGGAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C00HBa0081D06-3cnAc/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U318517" ref_strand="+" ref_description="SGN-U318517        Tomato 200607 #1 [3 ESTs aligned]">
      <seq>gccggtcttctgattcccacattcggcttttgctcttattattgttgtggcgtatgtggctgcgtgttcttcactgcccaatctgctcccaatagcttcaactttctatatcctccatcactgcttaattgttgtttccatttgacaaaatacaaagttcaaattctcagatggcttcaatcgtagtagctaagctgcatcctcctccgcccgccatcacgggcagacaaacccttttcggaactgttaacacttctacacttttcgtccccaccagtaagttttcttctgcaacattcacaataacagtttcagtctgcaattagtcttattgaggtataattttgaggtattgtgttgcaatttcataggtgaaaatccgatcagtagtaataccgggcttgtaacatcgatgatgctacttttcactagtttttttttttaaatgactgtagtgtctgggcctcgattaaattacctgttgtttttgctacatttcactagatagtttaaagactagtatggatgtttctcgttatgtagtgtgtttagtccatagagaggacttaacaagaagagttggagatactcaatgaacattcatcatttact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C00HBa0081D06-3cnAc/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C00HBa0081D06.1" temp_strand="+" temp_description="C00HBa0081D06.1  AC218144.2 htgs_phase:3 submitted_to_sgn_as:C12HBa0081D06">
        <position start="61152" stop="62363"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="61452" g_stop="62063" g_length="612"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="612" r_length="612" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C00HBa0081D06.1" gen_strand="+" ref_id="SGN-U318517" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>612</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C00HBa0081D06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U318517" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="61452" e_stop="62063"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCCGGTCTTCTGATTCCCACATTCGGCTTTTGCTCTTATTATTGTTGTGGCGTATGTGGCTGCGTGTTCTTCACTGCCCAATCTGCTCCCAATAGCTTCAACTTTCTATATCCTCCATCACTGCTTAATTGTTGTTTCCATTTGACAAAATACAAAGTTCAAATTCTCAGATGGCTTCAATCGTAGTAGCTAAGCTGCATCCTCCTCCGCCCGCCATCACGGGCAGACAAACCCTTTTCGGAACTGTTAACACTTCTACACTTTTCGTCCCCACCAGTAAGTTTTCTTCTGCAACATTCACAATAACAGTTTCAGTCTGCAATTAGTCTTATTGAGGTATAATTTTGAGGTATTGTGTTGCAATTTCATAGGTGAAAATCCGATCAGTAGTAATACCGGGCTTGTAACATCGATGATGCTACTTTTCACTAGTTTTTTTTTTTAAATGACTGTAGTGTCTGGGCCTCGATTAAATTACCTGTTGTTTTTGCTACATTTCACTAGATAGTTTAAAGACTAGTATGGATGTTTCTCGTTATGTAGTGTGTTTAGTCCATAGAGAGGACTTAACAAGAAGAGTTGGAGATACTCAATGAACATTCATCATTTACT</genome_strand>
        <mrna_strand>GCCGGTCTTCTGATTCCCACATTCGGCTTTTGCTCTTATTATTGTTGTGGCGTATGTGGCTGCGTGTTCTTCACTGCCCAATCTGCTCCCAATAGCTTCAACTTTCTATATCCTCCATCACTGCTTAATTGTTGTTTCCATTTGACAAAATACAAAGTTCAAATTCTCAGATGGCTTCAATCGTAGTAGCTAAGCTGCATCCTCCTCCGCCCGCCATCACGGGCAGACAAACCCTTTTCGGAACTGTTAACACTTCTACACTTTTCGTCCCCACCAGTAAGTTTTCTTCTGCAACATTCACAATAACAGTTTCAGTCTGCAATTAGTCTTATTGAGGTATAATTTTGAGGTATTGTGTTGCAATTTCATAGGTGAAAATCCGATCAGTAGTAATACCGGGCTTGTAACATCGATGATGCTACTTTTCACTAGTTTTTTTTTTTAAATGACTGTAGTGTCTGGGCCTCGATTAAATTACCTGTTGTTTTTGCTACATTTCACTAGATAGTTTAAAGACTAGTATGGATGTTTCTCGTTATGTAGTGTGTTTAGTCCATAGAGAGGACTTAACAAGAAGAGTTGGAGATACTCAATGAACATTCATCATTTACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C00HBa0081D06-3cnAc/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U318516" ref_strand="+" ref_description="SGN-U318516        Tomato 200607 #1 [12 ESTs aligned] arabidopsis/peptide: | Symbol: None | expressed protein | chr1:19457238-19458366 REVERSE | Aliases: F9I5.10, F9I5_10(evalue: 2e-21, score=100) genbank/nr: gi|18403896|ref|NP_564603.1| expressed protein [Arabidopsis thaliana] gi|25354696|pir||B96562 unknown protein [imported] - Arabidopsis thaliana gi|6850346|gb|AAF29409.1| unknown protein [Arabidopsis thaliana] gi|15294156|gb|AAK95255.1| At1g52220/F9I5_10 [Arabidopsis thaliana] gi|20453285|gb|AAM19881.1| At1g52220/F9I5_10 [Arabidopsis thaliana](evalue: 1e-19, score=100)">
      <seq>tggctgcgtgttcttcactgcccaatctgctcccaatagcttcaactttctatatcctccatcactgcttaattgttgtttccatttgacaaaatacaaagttcaaattctcagatggcttcaatcgtagtagctaagctgcatcctcctccgcccgccatcacgggcagacaaacccttttcggaactgttaacacttctacacttttcgtccccaccacaagacaaggtcacctggccatcacagcaaaggctactagtgaaagttctgaatccttatcctccccaagtgttgttaaatcagtaaagaatatttgggacaaccctgaagaccggattgctgtaattgggttgggaattgctgctattgttggtttctgggctgcttcaaattttgtggcggcaatcgacagcctgcctctcattccaggtgtgtttgaatttatcgggatattgttttctacttggttcgtatacagatacctcttattcaagcccaacaggcaagaattgtttcaagggatcaataaatcaatatcagatatcttagggcagtgatctgaaaatattaggatgatacagttcatgttgtacttctgtatccaagcatcaccaaaatgctgaatcattttacagatgaaatgatatcttcagaaatgagccaacattttttttcctcatatactgcttcttacatctataatttgttaatatgccttttgccaactggaagtagagtgctttccccatccctctctcaatttcctatggttttctactgtctgccatagtcagactgatccaacgaaaactctttagcaagtttgagttcacgtatataaaccaaaagtgggtaccctaatttgtttatgatttgatatttagtatttaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C00HBa0081D06-3cnAc/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C00HBa0081D06.1" temp_strand="+" temp_description="C00HBa0081D06.1  AC218144.2 htgs_phase:3 submitted_to_sgn_as:C12HBa0081D06">
        <position start="61208" stop="64615"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="61508" g_stop="61727" g_length="220"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="220" r_length="220" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="61728" i_stop="62448" i_length="721">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="62449" g_stop="62543" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="221" r_stop="315" r_length="95" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="62544" i_stop="62906" i_length="363">
            <donor d_prob="0.204" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="62907" g_stop="62993" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="316" r_stop="402" r_length="87" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="62994" i_stop="63353" i_length="360">
            <donor d_prob="0.964" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="63354" g_stop="63416" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="403" r_stop="465" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="63417" i_stop="63583" i_length="167">
            <donor d_prob="0.935" d_score="1.00"/>
            <acceptor a_prob="0.966" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="63584" g_stop="63621" g_length="38"/>
          <reference_exon_boundary r_type="cDNA" r_start="466" r_stop="503" r_length="38" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="63622" i_stop="63927" i_length="306">
            <donor d_prob="0.982" d_score="0.00"/>
            <acceptor a_prob="0.930" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="63928" g_stop="64325" g_length="398"/>
          <reference_exon_boundary r_type="cDNA" r_start="504" r_stop="901" r_length="398" r_score="0.982"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C00HBa0081D06.1" gen_strand="+" ref_id="SGN-U318516" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>901</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C00HBa0081D06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U318516" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="61508" e_stop="61727"/>
          <exon e_start="62449" e_stop="62543"/>
          <exon e_start="62907" e_stop="62993"/>
          <exon e_start="63354" e_stop="63416"/>
          <exon e_start="63584" e_stop="63621"/>
          <exon e_start="63928" e_stop="64325"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGCTGCGTGTTCTTCACTGCCCAATCTGCTCCCAATAGCTTCAACTTTCTATATCCTCCATCACTGCTTAATTGTTGTTTCCATTTGACAAAATACAAAGTTCAAATTCTCAGATGGCTTCAATCGTAGTAGCTAAGCTGCATCCTCCTCCGCCCGCCATCACGGGCAGACAAACCCTTTTCGGAACTGTTAACACTTCTACACTTTTCGTCCCCACCAGTAAGTTTTCTTCTGCAACATTCACAATAACAGTTTCAGTCTGCAATTAGTCTTATTGAGGTATAATTTTGAGGTATTGTGTTGCAATTTCATAGGTGAAAATCCGATCAGTAGTAATACCGGGCTTGTAACATCGATGATGCTACTTTTCACTAGTTTTTTTTTTTAAATGACTGTAGTGTCTGGGCCTCGATTAAATTACCTGTTGTTTTTGCTACATTTCACTAGATAGTTTAAAGACTAGTATGGATGTTTCTCGTTATGTAGTGTGTTTAGTCCATAGAGAGGACTTAACAAGAAGAGTTGGAGATACTCAATGAACATTCATCATTTACTAGCAAAAGAAATGTTTCTATTCCGTATTTGTTACTATAGATAGAAAGTAAATGAGCCTGTGAGCGAGGCTATCCTGAATTTGTTATTGACTTTTGGCTACTATGGAATGGAGGTGGATGAACCTGTAAATAGAACATTCATGAAGGTTCGTTTGATATGCGGTTACAGAACAATTAATACTGCTAAACCAGGTAAAATTGACTTTGAAAGCTTGTTGAAGATGCCAAGTCATATTCAGATTCTGGCTTCTGATAAATCACCTTGACAGTTATGAAATTTCTGCTGCTCAATTTATGTCTCGTCTCCTCCTTGGTTTGTTTTTTTCATATATAATAAGGGGTACTGATATTTTACAGATTCCTTCTAATTGTTACTGTTTCTGTAGCAAGACAAGGTCACCTGGCCATCACAGCAAAGGCTACTAGTGAAAGTTCTGAATCCTTATCCTCCCCAAGTGTTGTTAAATCAGTAAAGAATATTGTGAGTGCCCCTTCTTTCCCTTTTCGGCACTCATATCTTGATTCCAAGAGTTCATTTTAGTGACACTTATACGAGAAACAGAATTAACCCACTGCTCATTTCTCTTGGCAAAAGACACCACGTGGAGTTGTAGATTAATGTTCAGTCTGTTTCATTCATTGTTTGCACTTTTGCATAGTTGCATTTTCTGTTGATTGTACAAGGGCAAAGATTCCATGCTACACTCCCCTTTGGCCTTCAGCCCCAGACAAAAAAAAAAGAAAAAAGTCTGGAAGTTGACACTGTAAAGCAACATAGATCTTCTGACCTTACTTTTTTATGATTATATTGGTTGAATTGCATCTTGTTTGATTGTTGAAACAGTGGGACAACCCTGAAGACCGGATTGCTGTAATTGGGTTGGGAATTGCTGCTATTGTTGGTTTCTGGGCTGCTTCAAATTTTGTGGCGGTAAACTTTGTTGCTTTATTATATATAGATGCTGGAGTTATTATATGTCCATACCACATTGAGAAGTCTACGATATGGCCTCTTTGGTGGTTGACAATATCTTTATGACCATTTATTGACAATACCTACCTATCCAAGAACATATTGAGCTCCAATAACCCTTGCTGGAAACATGACTAGTGCAACATATGACCTCATACTAGCAGTCTTACATCATTTTTGGCCCATAATGACCGTTATTTTTTCCAGTGTATTAGCGACAGGATGCAGTGTTGCTTTAAATTATACTGTTGAGAGATTCAAAGATTTTTTTGTTTTTAAGAATTGTGAATGTACTGATGTTCTTTAAGTTTTGAATAGGCAATCGACAGCCTGCCTCTCATTCCAGGTGTGTTTGAATTTATCGGGATATTGTTTTCTACTGTAAGTATTGAAGTACACTTATTTCCTCCTGTATTTATTGTGGAACAATAGAAAGAATTCTGTCTCCTTTATTGTTTCAGGTGTCAAATAGTGAGTTTAATATGTTGTTATTCTGATTCCTCGGCAATCATTGATTTAATGCATTTCCTGTTCTCTCTCTTTTGTAGTGGTTCGTATACAGATACCTCTTATTCAAGCCCAACAGGTAAAAACTCTGTCAAAGGTTGCCTTCTCTTATCTAGTGTCTCCAATCTTACCCCCTCCCGTCTTCTGCTTCATGTCTTTAGCTGTTATATCTGTTTTGCACATATAATAAAGTGAAAAATACCACTAACTTGCTTTATTCACATGCCCACATTTTGTTTCTCAAGCTTCTACAAATCCTTCATGCAAATGTTTGAATTGTTGGTCCAACCATACACTTTGAATTGTTTGCTTCACTTCAGTCATTGTTGATGACTTCATACCACTGCGCTCCACCTGACATGTTCTTTTATTTTTCCAATAACAGGCAAGAATTGTTTCAAGGGATCAATAAATCAATATCAGATATCTTAGGGCAGTGATCTGAAAATATTAGGATGATACAGTTCATGTTGTACTTCTGTATCCAAGCATCACCAAAATGCTGAATCATTTTACAGATGAAATGATATCTTCAGAAATGAGCCAACATTTTTTTTCCTCATATACTGCTTCTTACATCTATAATTTGTTAATATGCCTTTTGCCAACTGGAAGTAGAGTGCTTTCACCATCCCTCTCTCAATTTCCTATGGTTTTCTACTGTCTGCCATAGTCAGACTGATCCAACGAAAACTCTTTAGCAAGTTTGAGTTCACGTATATAAACCAAAAGTGGGTACCCTAATTTGTTTATGATTTGATATTTAGTATTTATTTAAAATTT</genome_strand>
        <mrna_strand>TGGCTGCGTGTTCTTCACTGCCCAATCTGCTCCCAATAGCTTCAACTTTCTATATCCTCCATCACTGCTTAATTGTTGTTTCCATTTGACAAAATACAAAGTTCAAATTCTCAGATGGCTTCAATCGTAGTAGCTAAGCTGCATCCTCCTCCGCCCGCCATCACGGGCAGACAAACCCTTTTCGGAACTGTTAACACTTCTACACTTTTCGTCCCCACCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGACAAGGTCACCTGGCCATCACAGCAAAGGCTACTAGTGAAAGTTCTGAATCCTTATCCTCCCCAAGTGTTGTTAAATCAGTAAAGAATATT...........................................................................................................................................................................................................................................................................................................................................................................TGGGACAACCCTGAAGACCGGATTGCTGTAATTGGGTTGGGAATTGCTGCTATTGTTGGTTTCTGGGCTGCTTCAAATTTTGTGGCG........................................................................................................................................................................................................................................................................................................................................................................GCAATCGACAGCCTGCCTCTCATTCCAGGTGTGTTTGAATTTATCGGGATATTGTTTTCTACT.......................................................................................................................................................................TGGTTCGTATACAGATACCTCTTATTCAAGCCCAACAG..................................................................................................................................................................................................................................................................................................................GCAAGAATTGTTTCAAGGGATCAATAAATCAATATCAGATATCTTAGGGCAGTGATCTGAAAATATTAGGATGATACAGTTCATGTTGTACTTCTGTATCCAAGCATCACCAAAATGCTGAATCATTTTACAGATGAAATGATATCTTCAGAAATGAGCCAACATTTTTTTTCCTCATATACTGCTTCTTACATCTATAATTTGTTAATATGCCTTTTGCCAACTGGAAGTAGAGTGCTTTCCCCATCCCTCTCTCAATTTCCTATGGTTTTCTACTGTCTGCCATAGTCAGACTGATCCAACGAAAACTCTTTAGCAAGTTTGAGTTCACGTATATAAACCAAAAGTGGGTACCCTAATTTGTTTATGATTTGATATTTAGTATTTAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C00HBa0081D06-3cnAc/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U336545" ref_strand="+" ref_description="SGN-U336545        Tomato 200607 #1 [1 ESTs aligned]">
      <seq>tcctccgcccgccatcacgggcagacaaacccttttcggaactgttaacacttctacacttttcgtccccaccagtaagttttcttctgcaacattcacaataacagtttcagtctgcaattagtcttattgaggtataattttgaggtattgtgttgcaatttcataggtgaaaatccgatcagtagtaataccgggcttgtaacatcgatgatgctacttttcactagtttttttttttaaatgactgtagtgtctgggcctcgattaaattacctgttgtttttgctacatttcactagatagtttaaagactagtatggatgtttctcgttatgtagtgtgtttagtccatagagaggacttaacaagaagagttggagatactcaatgaacattcatcatttactagcaaaagaaatgtttctattccgtatttgttactatagatagaaagtaaatgagcctgtgagcgaggctatcctgaatttgttattgacttttggctactatggaatggaggtggatgaacctgtaaatagaacattcatgaaagttcgtttgatatgcggttacagaaacattaatactgctaaaccaggtaaaattgactttgaaagc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C00HBa0081D06-3cnAc/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C00HBa0081D06.1" temp_strand="+" temp_description="C00HBa0081D06.1  AC218144.2 htgs_phase:3 submitted_to_sgn_as:C12HBa0081D06">
        <position start="61354" stop="62574"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="61654" g_stop="62274" g_length="621"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="621" r_length="621" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C00HBa0081D06.1" gen_strand="+" ref_id="SGN-U336545" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>621</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C00HBa0081D06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U336545" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="61654" e_stop="62274"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCTCCGCCCGCCATCACGGGCAGACAAACCCTTTTCGGAACTGTTAACACTTCTACACTTTTCGTCCCCACCAGTAAGTTTTCTTCTGCAACATTCACAATAACAGTTTCAGTCTGCAATTAGTCTTATTGAGGTATAATTTTGAGGTATTGTGTTGCAATTTCATAGGTGAAAATCCGATCAGTAGTAATACCGGGCTTGTAACATCGATGATGCTACTTTTCACTAGTTTTTTTTTTTAAATGACTGTAGTGTCTGGGCCTCGATTAAATTACCTGTTGTTTTTGCTACATTTCACTAGATAGTTTAAAGACTAGTATGGATGTTTCTCGTTATGTAGTGTGTTTAGTCCATAGAGAGGACTTAACAAGAAGAGTTGGAGATACTCAATGAACATTCATCATTTACTAGCAAAAGAAATGTTTCTATTCCGTATTTGTTACTATAGATAGAAAGTAAATGAGCCTGTGAGCGAGGCTATCCTGAATTTGTTATTGACTTTTGGCTACTATGGAATGGAGGTGGATGAACCTGTAAATAGAACATTCATGAAGGTTCGTTTGATATGCGGTTACAGAACAATTAATACTGCTAAACCAGGTAAAATTGACTTTGAAAGC</genome_strand>
        <mrna_strand>TCCTCCGCCCGCCATCACGGGCAGACAAACCCTTTTCGGAACTGTTAACACTTCTACACTTTTCGTCCCCACCAGTAAGTTTTCTTCTGCAACATTCACAATAACAGTTTCAGTCTGCAATTAGTCTTATTGAGGTATAATTTTGAGGTATTGTGTTGCAATTTCATAGGTGAAAATCCGATCAGTAGTAATACCGGGCTTGTAACATCGATGATGCTACTTTTCACTAGTTTTTTTTTTTAAATGACTGTAGTGTCTGGGCCTCGATTAAATTACCTGTTGTTTTTGCTACATTTCACTAGATAGTTTAAAGACTAGTATGGATGTTTCTCGTTATGTAGTGTGTTTAGTCCATAGAGAGGACTTAACAAGAAGAGTTGGAGATACTCAATGAACATTCATCATTTACTAGCAAAAGAAATGTTTCTATTCCGTATTTGTTACTATAGATAGAAAGTAAATGAGCCTGTGAGCGAGGCTATCCTGAATTTGTTATTGACTTTTGGCTACTATGGAATGGAGGTGGATGAACCTGTAAATAGAACATTCATGAAAGTTCGTTTGATATGCGGTTACAGAAACATTAATACTGCTAAACCAGGTAAAATTGACTTTGAAAGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C00HBa0081D06-3cnAc/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U319325" ref_strand="+" ref_description="SGN-U319325        Tomato 200607 #1 [14 ESTs aligned] arabidopsis/peptide: | Symbol: None | expressed protein, weak similarity to TATA element modulatory factor (TMF) (Swiss-Prot:P82094) (Homo sapiens) | chr1:30032650-30038401 REVERSE | Aliases: F19K16.21, F19K16_21(evalue: 5e-132, score=468) genbank/nr: Tropomyosin;(evalue: 9e-135, score=484)">
      <seq>tgacggtggacgctgaagttcaccgttcctgcagatcgatttctttttcgcccttcccaaaatcttttcatttttattgctccgcttccaagttccaagtgtggatgaaggagctttccatgtaatttgagctttggatcgagtcaaaaagatggcgtggtttggtgggaaacttgatttgacgaacttggatcttgccggtgccgtgaataagctcagtgagagtgtcaaaaacattgaaaaaaatttcgacactgcacttggtctcgaggagaaatctgagtctagtaacaatgaagcttcagggttatggccttcaactacggataggagggccttatttgatcctgtcatgtcttttatggggcaaaaaagtgaggggactgctgaagaatctgtagagaaagctgagtcgtcaaagcccaccttgcccacaggggaagtagttgaagattcagctgagactacaactcgacgtggtgtggttcctaaagaaccaaaagaagaaacaacggacattattgaagaaactaaatcggttcaagaacctattgaagaagcaaaggatgttgatgcgaaaccaaatcaaatgatatctgctgaagaagaaactgaggaggcaagagctgttgatgtccaactgaattcttctacggaaccaagttttgatcaggaggaacaaagaagtgttactgggccagatgaaagaaaagctgaaattaattcactggcagaagcatcgaaggtcaatgagcttgatcaggaaacatctccaggaatcctccaaaagaatattccagagcgagaatcatctgaaaacctcgagttggttgtttcccaatcatcaaatgctttatctcaaactgaagttggtatcccgctgcttgttgattcaaaggaaaatactggtaatgatggggaacagaagaaagaagtcactgaggaatctcctcctgttcaattagaggatgcatcaaattaccctacagacagggaacagaagaaagaagtcaccatggaatctccttcagctgaatcacgggatgcatcaagtgaccgagcagatagtggaagaccttctgtttcagattctgtaactgccagcgaaggtgaaagtcttgaagagcattctaacaggagctttcttggtgaccagcacactgatgaaggtctgaagaagctatctgatacagttatgcctgaaaatgagttggttagtatacctgtggaggctacccagcgaggaaatgatcaggagactggtgtgaaagaacggttgagctccggaagcaactcttcagatgttaccaattcagtggttgaactggagaagctgaaaaaggaaatgaaaatgatggaaactgcattacaaggagctgctagacaagctcaggctaaagctgatgaaatagcgaagttgatgaatgagaacgagcaattgaaggctgttactgaggatctgagaaggaagtccagtgatgcagcaattgaatctctgcgagaagagtaccatcaaaaagtttctgctcttgagaggaaggtttatgctctcaccaaagaaagggatacacttcgcagggaacataataagaagagtgatgctgcagctcttctcaaagagaaggatgagataattactcaagtaatggctgaaggtgagcagctttctaaaaagcaagctgcccaagaagctcagatgagaaagttaagggcacagatcagagagcttgaagaagagaagaaaggattacataccaagcttgaggttgaagagaacaaagtagagagtataaagagggacaaggcagcaacagaaaaattgcttcatgaaacagtcgaaaaacatcaagcagaacttgcaactcaaaaagaatactatactaatgctttaaatgctgcaaaagaagcagaagctttatctgaggcacgggctaacaatgaagctagaactcaactagagggtcgtctcagagaggctgaagaccgtgaagcaatgcttgttcaggcacttgaagaattaaggcaaacacttaccagaacggagcagcaggcagtttttaaagaagatatgctccgcagagaaattgaagatctccagaaaagataccaagccagtgaacgtcgatgtgaggagttgataacacaagttcccgaatcta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C00HBa0081D06-3cnAc/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C00HBa0081D06.1" temp_strand="+" temp_description="C00HBa0081D06.1  AC218144.2 htgs_phase:3 submitted_to_sgn_as:C12HBa0081D06">
        <position start="65527" stop="76754"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="65827" g_stop="65929" g_length="103"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="103" r_length="103" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="65930" i_stop="66110" i_length="181">
            <donor d_prob="0.922" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="66111" g_stop="66306" g_length="196"/>
          <reference_exon_boundary r_type="cDNA" r_start="104" r_stop="299" r_length="196" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="66307" i_stop="68134" i_length="1828">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.617" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="68135" g_stop="69228" g_length="1094"/>
          <reference_exon_boundary r_type="cDNA" r_start="300" r_stop="1393" r_length="1094" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="69229" i_stop="70128" i_length="900">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="70129" g_stop="70200" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="1394" r_stop="1465" r_length="72" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="70201" i_stop="71365" i_length="1165">
            <donor d_prob="0.654" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="71366" g_stop="71440" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="1466" r_stop="1540" r_length="75" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="71441" i_stop="72549" i_length="1109">
            <donor d_prob="0.979" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="72550" g_stop="72664" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="1541" r_stop="1655" r_length="115" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="72665" i_stop="73718" i_length="1054">
            <donor d_prob="0.951" d_score="1.00"/>
            <acceptor a_prob="0.710" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="73719" g_stop="73780" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="1656" r_stop="1717" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="73781" i_stop="73865" i_length="85">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.822" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="73866" g_stop="73913" g_length="48"/>
          <reference_exon_boundary r_type="cDNA" r_start="1718" r_stop="1765" r_length="48" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="73914" i_stop="75901" i_length="1988">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="75902" g_stop="76186" g_length="285"/>
          <reference_exon_boundary r_type="cDNA" r_start="1766" r_stop="2050" r_length="285" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="76187" i_stop="76263" i_length="77">
            <donor d_prob="0.683" d_score="1.00"/>
            <acceptor a_prob="0.862" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="76264" g_stop="76323" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="2051" r_stop="2110" r_length="60" r_score="1.000"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="76324" i_stop="76405" i_length="82">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="76406" g_stop="76454" g_length="49"/>
          <reference_exon_boundary r_type="cDNA" r_start="2111" r_stop="2159" r_length="49" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C00HBa0081D06.1" gen_strand="+" ref_id="SGN-U319325" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>2159</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C00HBa0081D06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U319325" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="65827" e_stop="65929"/>
          <exon e_start="66111" e_stop="66306"/>
          <exon e_start="68135" e_stop="69228"/>
          <exon e_start="70129" e_stop="70200"/>
          <exon e_start="71366" e_stop="71440"/>
          <exon e_start="72550" e_stop="72664"/>
          <exon e_start="73719" e_stop="73780"/>
          <exon e_start="73866" e_stop="73913"/>
          <exon e_start="75902" e_stop="76186"/>
          <exon e_start="76264" e_stop="76323"/>
          <exon e_start="76406" e_stop="76454"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGACGGTGGACGCTGAAGTTCACCGTTCCTGCAGATCGATTTCTTTTTCGCCCTTCCCAAAATCTTTTCATTTTTATTGCTCCGCTTCCAAGTTCCAAGTGTGGTATTAAAAAACTTCCAATCAATCCAATTTTCAATATCTTTTTTCTTTGTAACTTTCTGAATCGGAAATTATTGAATGATGGGATCTGATTGAACACAAAAACAATTTTGCTGTTATATGGATGTTGTTTATTGAAATTGGAATTTCTTAGGATTTTGACAATGTATGATTCATTTGATAGGATGAAGGAGCTTTCCATGTAATTTGAGCTTTGGATCGAGTCAAAAAGATGGCGTGGTTTGGTGGGAAACTTGATTTGACGAACTTGGATCTTGCCGGTGCCGTGAATAAGCTCAGTGAGAGTGTCAAAAACATTGAAAAAAATTTCGACACTGCACTTGGTCTCGAGGAGAAATCTGAGTCTAGTAACAATGAAGGTATCTATTAGATCGTTATACTTTCTCAAAATTTTATCTCATACGTTAATGTTAATCCTCAATATTAGTTGGATTCAGCATGTCCGGACCAGCGTTGGCTGCTCGCCTAATTCCACTAGATACGTGCCACCTCCCACTGGATACAGATGCATATTTATTCCACTCTATTTATGAAAATTAGGTTTCTAACTAGAGTTTGTTTAAACTTACTTAGCGAACACTAATGTAAGTGTAACCTCAAGCAGATCATTGATCCTGGAAAGAATTTCATAGCACTTATTGGCTCTATAGAATTCTTGTATCTTTATACAATGGCGTGCTTGATGCTTTAGAAGCTGCCTAAGATCTCTCCGATGTATTATGACTTTTCTAATACTGCCCTTCATATTTGGTTGTTGCCCTTGTGAAAATTGAATCTGGTAAGGCCAAGAATGAAATGCATATTTTAGTATGTTTGAACTTCTTATTGCCTGCATGTTTGGGAATCAGTAGTCTATAACTCCTAACAGATTCGTGTCTGCTAGAAACACTGATTAATAAATGATGGTGGGATTACACAGTTCAAGTCTTGCAATATCCGAATATGTGAATGGTTCAGTGTAAATGCTTTCAACCCATATTTGACCCGCTAAATAACCATAACTGACTCATTTTTATACTGTTTAAAAATAGGTTGAACCCATATTTCACCCATTTTGAGTATCACCCACCCAACCTGTTCAAATAAGGACTGGTTGATGACAAAATGGGTTCATTTTGCCAACACTAGTTAGGAGTAAGCTCTGATGTGAGAGTAACAACGTCATGTCAGAGTAGGTTTGGGTGCCAACATATAGATCTTGGATTGCAAGACTAAGATAAGAGGTAATTACTGGCCTCTCGGAGTTCCAAAAAAAGGAAATTCAGAGATGAGCGAATGAGATTATATATGGGGATAATTTGGAGATATCAAGCCATTAGTTGTCTGGGGTGCCTCAATAATAAAGTGGTGATGTGAAATCTCAGCACTGTATTAACGATTGAATAGGGTGTATTAGTAATGCCGCTATTAGTAATGTTGAGATTATTTTGTATGCCATGTTTGATTTGGTGTTAAAAAAATAACATGCATTGCATATTTCTAAAATAAATTATTTGCTTACAAAAATATCATGCACAAACACAATGGGAAAGATGTTGAAAAGGTTTGGAGGGGCAGTTGTGTCTTTACCCATCCTAATGCATACATTAGAATCCCTTGCATTGCTAATACAATGGTTTCTTATGTATTAGTTATGCATAGGCCATAGCATAATGCCTAATAGAGTGTATAATTAATGCATTAGTTATACATAAGTTGAAAAAGTGTACCAAATAAGGTATTAATAATACATTAAGCTAATTGCATGCATTATTTTTCTAATGCACCTTAAGAACGACCCTATAGAGTGATAGACAATCTCTTGCCTGGCGGAGAGTGCAATAGCTTGGGAATGGAGTGACACTTTCTAACTTTGGTCTTAGAAGCTTCCAAGTATATGTATGGCATAAACTGATGGCATCTGTTAGTTACTTACACAGACACTTGCACATGTACACACACAAATATGTTTCGCGTATATTTGTGTGTGTTCCAACACCTTCATAAACTGATTTGAATGTCCTCCAAAAATGTTAACCGAATGTTGAATTTCTTTGCTGCTTGTCTTACCACATTCCATGCATTCATTTAAGCCTTCTTAAGTATATCAGATTGATGCATTTCTTAGGAAAGTCAAATTTTAGAGCTGACTGATTTATTTCAATGCTTCCCTTTTATCTTGTGGGCAATGCTTCGATTGCATGCCAGCTTCAGGGTTATGGCCTTCAACTACGGATAGGAGGGCCTTATTTGATCCTGTCATGTCTTTTATGGGGCAAAAAAGTGAGGGGACTGCTGAAGAATCTGTAGAGAAAGCTGAGTCGTCAAAGCCCACCTTGCCCACAGGGGAAGTAGTTGAAGATTCAGCTGAGACTACAACTCGACGTGGTGTGGTTCCTAAAGAACCAAAAGAAGAAACAACGGACATTATTGAAGAAACTAAATCGGTTCAAGAACCTATTGAAGAAGCAAAGGATGTTGATGCGAAACCAAATCAAATGATATCTGCTGAAGAAGAAACTGAGGAGGCAAGAGCTGTTGATGTCCAACTGAATTCTTCTACGGAACCAAGTTTTGATCAGGAGGAACAAAGAAGTGTTACTGGGCCAGATGAAAGAAAAGCTGAAATTAATTCACTGGCAGAAGCATCGAAGGTCAATGAGCTTGATCAGGAAACATCTCCAGGAATCCTCCAAAAGAATATTCCAGAGCGAGAATCATCTGAAAACCTCGAGTTGGTTGTTTCCCAATCATCAAATGCTTTATCTCAAACTGAAGTTGGTATCCCGCTGCTTGTTGATTCAAAGGAAAATACTGGTAATGATGGGGAACAGAAGAAAGAAGTCACTGAGGAATCTCCTCCTGTTCAATTAGAGGATGCATCAAATTACCCTACAGACAGGGAACAGAAGAAAGAAGTCACCATGGAATCTCCTTCAGCTGAATCACGGGATGCATCAAGTGACCGAGCAGATAGTGGAAGACCTTCTGTTTCAGATTCTGTAACTGCCAGCGAAGGTGAAAGTCTTGAAGAGCATTCTAACAGGAGCTTTCTTGGTGACCAGCACACTGATGAAGGTCTGAAGAAGCTATCTGATACAGTTATGCCTGAAAATGAGTTGGTTAGTATACCTGTGGAGGCTACCCAGCGAGGAAATGATCAGGAGACTGGTGTGAAAGAACGGTTGAGCTCCGGAAGCAACTCTTCAGATGTTACCAATTCAGTGGTTGAACTGGAGAAGCTGAAAAAGGAAATGAAAATGATGGAAACTGCATTACAAGGAGCTGCTAGACAAGCTCAGGTATGTCCATATGCTACTTTAATGGAAATTTATGCACCTTCTGCTCCTCAGCATCAGTGGAACATTTCTGAATCTACTGACGTTACTTGAGAATATGAATCTTTTGTTGTATGCACCTATAGTAGGCGAGTCCAATAATTCACGTTGTATTACCTAAGATTAGCTGAAATCTGAATCCCACTCATCCTCAATAATTTCTCCCAACTTGTGTGGTCATGGATAAAAGTTGCTTCAATGAGTTGATTTTGACTAAAAGTAGCTTCAATTAAAGAAGTTCTGATTTGAAGTGTGTGTGTCATTGACACATCCCATTGATATTGTCTTGTACTTCTCAAATGACATAGTTTACGTTCTTGAGGTCTCAAATGTCTGAACACATGGATATCTTTTCCATAGTCCGTGGATCCTTTCTGAAGTTGTGGAATCCGTTGGCAAGGATGTTGGTATACGCCTAAAGATGATTGGACCGTGTAGCAGCTTCATACGTTTAATTGCAATTATCCCTTTATTATTATGCAGCATTATTCCAAAGCCAATAAATATATTTAAGGATTCTGGGTGATTGGAACTAATTCTCCCATCATGTATGAACTTCGCAATATCTTCCTGTTATGCCTCAAACTTAGAGGGAAGCTTGGACCGTGTAGCAGCTTCATACGTTTAATTGCAATTATCCCTTTATTATTATGCAGCAAGATTATTCCAAAGACAATAAATATATTTAAGGATTTTGGGTGATTGGAACTAATTTCTTCCATTATGTATGAACTTCTCAATATCTTCCTGTCATGCCACAAACTTGAAAAAAAATTCAGTTGGTGTGTTAGACCCCTTATTTTCAGTTCTTGTTTATAAAATGATGAACACTCAACAAGATGACATGTCATTGTTTTTCCTCAGGCTAAAGCTGATGAAATAGCGAAGTTGATGAATGAGAACGAGCAATTGAAGGCTGTTACTGAGGATCTGAGAGTAAGTTCTCATCATTTTGAAGTTCCTTTCGAGGCTGTTAATTCAATTTGTTGCTGTCCGCTAGTTTTTGAAATGGCATGAGTCAAAGACATACTATAGTTCCCATTGTTTCAGGATGAATTTACCATCTCATAAATTAGATTTCTAGTGTTGTTTTTCTGCTTGTTATTGCAGAACATTTCTTTCTCTTCTGCCCTTGCTTGCAATTTTCTTCTAGATAAGTTAATCTTGCATGTGAGCCAGATATTGTGTAAGCTTCTGTGCTGACTGGTCGAGTCATCTTAACTACCACCTAATTTGTTAAGCACTTTTTAATGAACATCATCAATAATCAGACTTCTCTTGACTAGATGCGTGTAGATCAGGAAGAATCGCTTCTGTTGCATAATTTCATATGACTCTCATCATTGATGATTTTGATTTAACTGCTTTCACATCAATACACGTTGCATTTTCTCTTATACAAATTCTAGCTTCTGTCCTGTTTGTTAGATGACTTGTGCTTCGTATGCTCTTCTATTCTCTCAGAACTGCTAGTTTCCTGTATCAATTTAAGTACAGAATGTTTCGGGGTGGCCCAGTGGTTTGGGCTTGGAATTTTTATGTTGGAGGTCTCAAGTGCGAAACCTCTTGCCAGCGAAAGCAAGGGGTTTGCCTTCAGGGTTGAGCTCGTCGCACCGGGCTTGGCTAGTGCGGGTTACCTCTCCTATGTTGTTTGCGAGCTATTGCATGTGGGTGGGGGTGGGGGGTGGGGGTGGGGGTTTACCCTGTGCGCACCTAAAGGATAGTGGCTGTGAGTTTCCCTTGTCATAAAAAAAAAAAGTTATCCCTGCAAGCAATTATTCTGTTGTTCATTTTATCTTCCTTTAGTATTAATATCATATGTGTAATTGGATCTTTATTGCTGCTGGGTGGGATCAGCGTAGCACGTGCCAATGGATGTGTGTTTTGTAATGGATAATGGATCGAAACTTTAGTTAACTCTTTTGTTAATTTTATTTAAATTGGTGAGTTCCAATGCACTTTTTAAAACTTTTTTCTAATTCCCCATCCCCACAGCGTTCCTCTTATGTGTACGTTAGGTTCATCTTTCATCCCTCATAATTCCCTTCTAAGTGAAACTCCACCAATATTATATCTCTTGCTTACACACTAATTTTTACAGAGGAAGTCCAGTGATGCAGCAATTGAATCTCTGCGAGAAGAGTACCATCAAAAAGTTTCTGCTCTTGAGAGGAAGGTATGAATGTGTTCACATGAATGTTTCAGCTTAAACTTCCATTGCTAAGTGCTTGCTTTATGTCTTGATCATCAGCCTTTTCACATCATAACAGTAGCATAAATTCTTGAAAGACAGTTTATTTGAGCTTTCACATTGTTGCATAGTTTTTCTACTTCATTTAGGCATCACTACAATGTGCAGCTTCAGCTTTTATGTGTATAACTTCATATTTTATGCTTGCTGGTTCTGTATAACGCTTGATGGTTTCTTACACTTTTAGTTTTTCAATGGTTCTAATAGACTCTAAGGATGCAGGATTATCTTGTTGAGCTGTAATGGGTCGAACCCCTTTAGTGTCAATAAGACCTTATTAACTACATATATGAATTGGGACGGGGAGCTTGACCCTCGAAAATCTGTATACTTCCACAGGAGAACATTCTTTGGAGAAACTCCATACCCTTCTTTTAGAGTTCTTGCTCTTGTAAAAAAAAGTAGAAGCATCTTTTATATGCTGCACATACATGATATTGACAGAAGAAGAGAAACATTCTGTGTTGGCTGGTAATATTCCATCTTTTCCGATTTCATTAAATTTTTTGAAGAAATTGCACCATCCTTCCCGCATCTCTATTTACTGCTGAAACCTCATGTCTACTACTTCCTAAAATTGCAGTTCCCCAGTTTGTTTTTTTAAAGAAAATCCTCCTGTACTATCAGTCATTGAGGGCTCTTCTAAACAAGAAATTCCATCCCTGAGGGCTCCACATCTGAGAAATTGTATCCTTGTTCTGCTAGCTTAGCATAACCAAATTTGGAAATAGAGTTGCACAGCATTCTTCTCTAATTAGTTGTTATGTTCTCCTTCATTTCCTTGTGTCCTTTTTCAAACAACTTTGAAATGCTATACTTGAGCCGAGTTCAATTAGAAACAAATTATCTTATCTCCACGAGGTAGGGGTAAAGTTTGCATACACCCCACGTACACCCCTCCCTAGATCCCACCTCCACTGATGGATTACACTCACTGGGTTTGTTGTTGTCGTATTAAAGGGGAAAATGAAATGTGTCCTAACATTCTAGTAAATGTGTTGTGAATAATATTTTTTAATACTCATTCTTTTCAGGTTTATGCTCTCACCAAAGAAAGGGATACACTTCGCAGGGAACATAATAAGAAGAGTGATGCTGCAGCTCTTCTCAAAGAGAAGGATGAGATAATTACTCAAGTAATGGCTGAAGGTATGACAAACTCAACTCTGGCTCTAACTGTGATTTTAATACATTACACCGTCATTATGCCTTTGTTTCATGTGAAGCTTTCCTACTATATGTGACATATAAGATAATTATACAGTTAAGGACAAGATACATTTTCATTAATCTTAGGTGATATTTTTGTTTCTAACTAGACGAAAACTTAGATATCATACTTGTGCTAGAGCGTCGGTCATACTTGCTGATCAACCAAAAAAGGGGCAGGTCATACCTGCGGCAATTATGTATGTATAGGTGGCAAATGGGCGGGTTGGGCTGAATTTGGGCTCGTCAAAATAGGCTGAGCTAATAAATAGCGGGTATTGACCCACCCAAAGTCACTTGGGCTGAAATGTGCAAAAATGCGGGTTATAACCCAACTTGCCGAACTCTTATTAAGTTTTAATTGCTTGATTTGTTCTTTTTAAATTTTTTATACCTTATAAAATTATTGTATTTCTTTTTTATGACCATATTAATATAATATATCAAATAAAATAAAACATCCTTTTAAAAATATTTTGACAAGATTTCCAATGGATCAATTTGGGCTAGACATCAGTCCAAAGTTTGATGGGCTGAAATGAGCTGAGCTAATAAATGAGCGGGTCAATAATTTTGCCATCTCTATATGTATTTCATTAGGGAAATAAATTCAAGATGGGTCGAAATGCCTGTTTGGGTGTGGTCTGATGATTGGACATTCTAAAAAGTAGTCAAGTCCTTAAGTATGGGTTCTATGGAAGAACTCAAGTTTTTGCATGCTGGAAGTTGCATCATATCAGAACTTTTGTGAGGAACTTCTTACTATTTTGTGCTGCTGCGACTGTACCTTTGGCTAGAGTGTCTTTTTCTTTTTATTGGTAACCTTTGACTAGAGTCTCTTTACACAATTTAGTTCCTGTTGACATGTATATCAGACTATTTGGAGAAATATTTTTATTCTTTTCAATTTTGTATAAGCTCTATATTCAACAAGATACATTATCTTGGGTTCTTTTTATGCCATTTCAATTTCTAAAACCCAGTTTTTCTCCAGGTGAGCAGCTTTCTAAAAAGCAAGCTGCCCAAGAAGCTCAGATGAGAAAGTTAAGGGCACAGGTGTGTAATCAGGCATACTCATTATTCCATTTCAGAAAGCATATTTATTAGTTTTAACAAATCTTCCATTTGTTTTGAAAGTTAGATCAGAGAGCTTGAAGAAGAGAAGAAAGGATTACATACCAAGCTTGAGGTCAGTCATTTCTAATTGATGCAACAACTTGATTGTAGATATTGTGAGGGGTGACAAGAGGTGCCTGGATTACTTTCAACTCTCTCCTATTATGGTTAATATGTTCTTTTATTATGTTAAAATGTCGACTGCCTTGTATTCATTTTCACGAAAATGTTATTCTTAGAGTTTTCAGCTATAAGTTGCTCTTGGTTTTAGCATGCATACTACAACAATTTGGGAGTAGAAATTTTCTAAAACTAACCGTAGCTGCAGTTGAAGTTCATCTGAGAAGGGGAGAAGTGTTCAAAATCTGTTTGGTGTGAAGGAACATATTTGTGGAAGATAAATCACTTTTTAGGGTTTTGTTGCCAAATAATGTTTTCCATCAAATGGGGGAGAACGTCTTCTGTTACACATGTATGGAAGTTATTTTCGTTACAGTTACCACAACTTCTAACTTCATATCACTGCTCTGACAAACATTTAGACATTATAATAAATCTTTATACTGTGTTACCTTTGTTAAAAGTATAAATAAAAATAAATCTTTATACTTAAAAAATTTCATCAACATACTATACAATGTGCTAACATTATTATTAACTCTTGATAAATGTCTTTTTTTTAAGAAACTATATTCTACGCACCAATGAACCACTGGGAAGCATTTTTCATAGAAGATATTTATCAGAAAATGACTTCATCTACATCGTACCAAACACATATAGTATTTTTTGATAGTTCTGCCTGGATAACTTGAGTCCACTTCAGAAAGATATTTTTTTCACCTGGTCTTTGTTCTAAGTAGGTATCCTTTTGTCTTGGAAGTTGCCTTTTTGCTGACCGCTTTAGTAGAATCAAGCAAGATGAGCCCAACTTTCGAAGGAATACCCTTAAGGAAATTTAGTAACTTGTAATTTTACTGCAATTTCCCCTCCTTGAGTTCTTGAGTTGTTCAAGGAACTGTAGGGTTTGTAAAATAAATCTTGGGTAGTGTTGAAGGAGTGGAATAGTAGGAATATTGAAGATATATCTAATTCCATTCACAAGGTTAAATGGAATTGCATTGTATCTCTACATTTTTGGTGTAAAGAGATAGGATTAGAGGATTCAGATCAACTTTTAGAATTTTTAGGATCCTTGTAAGTATTCTGTTTTTTGTTCTTCTCTGATTTTCTAAAGGTCCCCAGCATAACCTTTTTTATTTAAAAAAAATTTAAGCCATCACCATTACAACTTAAAGCTATTAGGTGTGGGGTTTGGCTTGACCCTACCATGTCTATAGTTTCCAACATAAATTACACAAAAACAGAGGGAGGATTTACCTAACCTCTGGCAAAAATAGAAAGTGGAAATTAGGACATCAAAAAATGGAATGCAACAAACTTATAACCTTCCACTCAAGCAAAATACAAGATTCAACTAATAAAAAAATTACATTTGTCATATCTTTTTTTTATACAAGGTAGTATGTGTTACCTACCTATTCTCAAAAAAAAAAAAAAAAGAATCTTGGGGCTAACTCAATCCCAAACGTCCCAAGACCATATAAGGAGACTAGCCATTTCTTTTTCGTCTGAGGTGGGACTCGTCAACCCCAACCTCACGCCCAGGACTGGAAATCTGGATACTGGACAATTTAATAAGGGGTCGAATATCAGGAAACAAGAATTGGGATGGTCTGATACCATGTAAGAAACTCAACCCCAAAAAGGCTAGCTCAAGTGGGGAGGGTTGCACAAGACCAGATAAGGAGAGATTCTTCAAGAGAGATGTTTGTATTTTTACTTCAATGTACCCTCATTGGTTTCTTGAGTTGTTAAAAGAACTTTATAGCTCTTCTTAGACAGTTTATATAGTCTCGTCACCTAGCACTTCTTTTCATGAAGTAAAGGATTGTCACTTAACTAGTGTTTAGTTGAGTTGATTGCTTTATGTTTCTTTTTTTTTTTGTGGGATTATGGTAGAAATTATGATTTTAACTTACATGCTTATGCCTTCCCTAGGTTGAAGAGAACAAAGTAGAGAGTATAAAGAGGGACAAGGCAGCAACAGAAAAATTGCTTCATGAAACAGTCGAAAAACATCAAGCAGAACTTGCAACTCAAAAAGAATACTATACTAATGCTTTAAATGCTGCAAAAGAAGCAGAAGCTTTATCTGAGGCACGGGCTAACAATGAAGCTAGAACTCAACTAGAGGGTCGTCTCAGAGAGGCTGAAGACCGTGAAGCAATGCTTGTTCAGGCACTTGAAGAATTAAGGCAAACACTTACCAGAACGGAGCAGCAGGTTTATATTCTTGAATAGTGTCTTATCGGGGTTCATCAATCTAATTTCGCAGGGCCTAACATTTTTTTCACCTGCAGGCAGTTTTTAAAGAAGATATGCTCCGCAGAGAAATTGAAGATCTCCAGAAAAGATACCAAGTATAACTTTCTCTTTTGCAACTTTTTGTGCTTGACTACTTAATCATGTTTCCTTTACATATACTTATTCTTCTGTGTTTAGGCCAGTGAACGTCGATGTGAGGAGTTGATAACACAAGTTCCCGAATCTA</genome_strand>
        <mrna_strand>TGACGGTGGACGCTGAAGTTCACCGTTCCTGCAGATCGATTTCTTTTTCGCCCTTCCCAAAATCTTTTCATTTTTATTGCTCCGCTTCCAAGTTCCAAGTGTG.....................................................................................................................................................................................GATGAAGGAGCTTTCCATGTAATTTGAGCTTTGGATCGAGTCAAAAAGATGGCGTGGTTTGGTGGGAAACTTGATTTGACGAACTTGGATCTTGCCGGTGCCGTGAATAAGCTCAGTGAGAGTGTCAAAAACATTGAAAAAAATTTCGACACTGCACTTGGTCTCGAGGAGAAATCTGAGTCTAGTAACAATGAAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCAGGGTTATGGCCTTCAACTACGGATAGGAGGGCCTTATTTGATCCTGTCATGTCTTTTATGGGGCAAAAAAGTGAGGGGACTGCTGAAGAATCTGTAGAGAAAGCTGAGTCGTCAAAGCCCACCTTGCCCACAGGGGAAGTAGTTGAAGATTCAGCTGAGACTACAACTCGACGTGGTGTGGTTCCTAAAGAACCAAAAGAAGAAACAACGGACATTATTGAAGAAACTAAATCGGTTCAAGAACCTATTGAAGAAGCAAAGGATGTTGATGCGAAACCAAATCAAATGATATCTGCTGAAGAAGAAACTGAGGAGGCAAGAGCTGTTGATGTCCAACTGAATTCTTCTACGGAACCAAGTTTTGATCAGGAGGAACAAAGAAGTGTTACTGGGCCAGATGAAAGAAAAGCTGAAATTAATTCACTGGCAGAAGCATCGAAGGTCAATGAGCTTGATCAGGAAACATCTCCAGGAATCCTCCAAAAGAATATTCCAGAGCGAGAATCATCTGAAAACCTCGAGTTGGTTGTTTCCCAATCATCAAATGCTTTATCTCAAACTGAAGTTGGTATCCCGCTGCTTGTTGATTCAAAGGAAAATACTGGTAATGATGGGGAACAGAAGAAAGAAGTCACTGAGGAATCTCCTCCTGTTCAATTAGAGGATGCATCAAATTACCCTACAGACAGGGAACAGAAGAAAGAAGTCACCATGGAATCTCCTTCAGCTGAATCACGGGATGCATCAAGTGACCGAGCAGATAGTGGAAGACCTTCTGTTTCAGATTCTGTAACTGCCAGCGAAGGTGAAAGTCTTGAAGAGCATTCTAACAGGAGCTTTCTTGGTGACCAGCACACTGATGAAGGTCTGAAGAAGCTATCTGATACAGTTATGCCTGAAAATGAGTTGGTTAGTATACCTGTGGAGGCTACCCAGCGAGGAAATGATCAGGAGACTGGTGTGAAAGAACGGTTGAGCTCCGGAAGCAACTCTTCAGATGTTACCAATTCAGTGGTTGAACTGGAGAAGCTGAAAAAGGAAATGAAAATGATGGAAACTGCATTACAAGGAGCTGCTAGACAAGCTCAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTAAAGCTGATGAAATAGCGAAGTTGATGAATGAGAACGAGCAATTGAAGGCTGTTACTGAGGATCTGAGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAAGTCCAGTGATGCAGCAATTGAATCTCTGCGAGAAGAGTACCATCAAAAAGTTTCTGCTCTTGAGAGGAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTATGCTCTCACCAAAGAAAGGGATACACTTCGCAGGGAACATAATAAGAAGAGTGATGCTGCAGCTCTTCTCAAAGAGAAGGATGAGATAATTACTCAAGTAATGGCTGAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAGCAGCTTTCTAAAAAGCAAGCTGCCCAAGAAGCTCAGATGAGAAAGTTAAGGGCACAG.....................................................................................ATCAGAGAGCTTGAAGAAGAGAAGAAAGGATTACATACCAAGCTTGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGAAGAGAACAAAGTAGAGAGTATAAAGAGGGACAAGGCAGCAACAGAAAAATTGCTTCATGAAACAGTCGAAAAACATCAAGCAGAACTTGCAACTCAAAAAGAATACTATACTAATGCTTTAAATGCTGCAAAAGAAGCAGAAGCTTTATCTGAGGCACGGGCTAACAATGAAGCTAGAACTCAACTAGAGGGTCGTCTCAGAGAGGCTGAAGACCGTGAAGCAATGCTTGTTCAGGCACTTGAAGAATTAAGGCAAACACTTACCAGAACGGAGCAGCAG.............................................................................GCAGTTTTTAAAGAAGATATGCTCCGCAGAGAAATTGAAGATCTCCAGAAAAGATACCAA..................................................................................GCCAGTGAACGTCGATGTGAGGAGTTGATAACACAAGTTCCCGAATCTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C00HBa0081D06-3cnAc/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U318826" ref_strand="+" ref_description="SGN-U318826        Tomato 200607 #1 [5 ESTs aligned] arabidopsis/peptide: | Symbol: None | expressed protein, weak similarity to TATA element modulatory factor (TMF) (Swiss-Prot:P82094) (Homo sapiens) | chr1:30032650-30038401 REVERSE | Aliases: F19K16.21, F19K16_21(evalue: 9e-77, score=283) genbank/nr: Tropomyosin;(evalue: 7e-87, score=323)">
      <seq>taaagaagatatgctttgtaaagaaatagaagatctccagaaaagatgcgcggccagtgaacgtcgatgtgaggagtggataacacacgttcccgaatttaccagacctcttcttacgcacatagaagtcatgcaggaaacaaactccaaaaaggctgaagcttgggctgctgttgagagaaccttgaattcacgtcttcaggaagccgaggcaaaagctgcaacttcagaagaaaaggagcgatctattaatgaacgcctttctcaaaccctatcccgaatcaatgttcttgaggctcagatatcttgtcttagagctgagcagacacagctaacaaggtcccttgacaaagagagacagcgggccgcagagaataggcaagaatatcttgctctaaaggaggaagctgagactaacgaaggtcgtgtgaatcagcttgaagaggaaattaaagaactcagaaggaaacacaagcaggaaatacaagaagcattaactcatcaggaactcctgcggcaggagttggaaagggagaaaactgctcgtttggatcaagaaagggccgctcgttctactaattatgtgcctgatcagagcccaataatgaagcagaaatctgggatagaaaatgttgcaggaagtttgacacgcagactttcgagtgctagcagcttgagtagtatggaggaaagctattttctgcaagcatctttggactcgtctgacaatttatctgagcgtagaaatgcattagagggtaatataagtccatactttatgaagagtatgacgcctgcatttcgccagaaagatggggaacttgcgtcttatatgtctcgac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C00HBa0081D06-3cnAc/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C00HBa0081D06.1" temp_strand="+" temp_description="C00HBa0081D06.1  AC218144.2 htgs_phase:3 submitted_to_sgn_as:C12HBa0081D06">
        <position start="75972" stop="78778"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76272" g_stop="76323" g_length="52"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="52" r_length="52" r_score="0.827"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="76324" i_stop="76405" i_length="82">
            <donor d_prob="0.997" d_score="0.82"/>
            <acceptor a_prob="0.998" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="76406" g_stop="76489" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="53" r_stop="136" r_length="84" r_score="0.917"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="76490" i_stop="76592" i_length="103">
            <donor d_prob="0.990" d_score="0.88"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="76593" g_stop="76658" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="137" r_stop="202" r_length="66" r_score="0.985"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="76659" i_stop="76729" i_length="71">
            <donor d_prob="0.933" d_score="1.00"/>
            <acceptor a_prob="0.947" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="76730" g_stop="76828" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="203" r_stop="301" r_length="99" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="76829" i_stop="76904" i_length="76">
            <donor d_prob="0.378" d_score="1.00"/>
            <acceptor a_prob="0.254" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="76905" g_stop="77123" g_length="219"/>
          <reference_exon_boundary r_type="cDNA" r_start="302" r_stop="520" r_length="219" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="77124" i_stop="77842" i_length="719">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.820" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="77843" g_stop="77954" g_length="112"/>
          <reference_exon_boundary r_type="cDNA" r_start="521" r_stop="632" r_length="112" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="77955" i_stop="78268" i_length="314">
            <donor d_prob="0.975" d_score="1.00"/>
            <acceptor a_prob="0.298" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="78269" g_stop="78478" g_length="210"/>
          <reference_exon_boundary r_type="cDNA" r_start="633" r_stop="842" r_length="210" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C00HBa0081D06.1" gen_strand="+" ref_id="SGN-U318826" ref_strand="+">
        <total_alignment_score>0.980</total_alignment_score>
        <cumulative_length_of_scored_exons>842</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C00HBa0081D06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U318826" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76272" e_stop="76323"/>
          <exon e_start="76406" e_stop="76489"/>
          <exon e_start="76593" e_stop="76658"/>
          <exon e_start="76730" e_stop="76828"/>
          <exon e_start="76905" e_stop="77123"/>
          <exon e_start="77843" e_stop="77954"/>
          <exon e_start="78269" e_stop="78478"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAAAGAAGATATGCTCCGCAGAGAAATTGAAGATCTCCAGAAAAGATACCAAGTATAACTTTCTCTTTTGCAACTTTTTGTGCTTGACTACTTAATCATGTTTCCTTTACATATACTTATTCTTCTGTGTTTAGGCCAGTGAACGTCGATGTGAGGAGTTGATAACACAAGTTCCCGAATCTACCAGACCTCTTCTCAGGCAGATAGAAGCCATGCAGGTTTCACTGCAGCTGAGATATTATTTTTCATATCCTATATATGGTCATGGTATATGGACCGCTCATTTAGTGTCTATGTTTTATGCCTCTTCATTGATTACAGGAAACAAACTCCAGAAAGGCTGAAGCTTGGGCTGCTGTTGAGAGAACCTTGAATTCACGTCTTCAGGTCTTAAGAGAAACATATAGAAACTTTATTTATAGTTGAAACTCGAAGGGTTTCTTAATTTTACTTCACAGGAAGCCGAGGCAAAAGCTGCAACTTCAGAAGAAAAGGAGCGATCTATTAATGAACGCCTTTCTCAAACCCTATCCCGAATCAATGTTCTTGAGGCTCAGGTTCTTTCACCTATTCCTTTGACGCTGCTTCATAGCGCTTCTCCCCAGGAATTTGCTTACAAATTTAGTATTGCAGATATCTTGTCTTAGAGCTGAGCAGACACAGCTAACAAGGTCCCTTGACAAAGAGAGACAGCGGGCCGCAGAGAATAGGCAAGAATATCTTGCTCTAAAGGAGGAAGCTGAGACTAACGAAGGTCGTGTGAATCAGCTTGAAGAGGAAATTAAAGAACTCAGAAGGAAACACAAGCAGGAAATACAAGAAGCATTAACTCATCAGGAACTCCTGCGGCAGGTAACAAAATTATGTTTTACTTTCCTATTAATTTGCTGTCTCAATCCCCTTTTAGCATCAATGATGCTTGTGGTTTTACATGCAGCATAATTTAAATATGATCAAGATGCTTCAATTGAAGAATATGCAAATCTCGTTTTGTCGATTTACTCATTTTTTACATATCAGCCAATGGTTGGCCTTCTTGGCTTTTGAATTATTTTATTCTCTTTTAAGGTCTCAGATCTGCTGAAATGGTCTTTTAGCGTATACCTAATCAGTGGCAGTAAAGCTCCTGTCACCTGTACTTTGCCCCTCATTGTCATTGTTCCCCTTTGATCTTGTCTTCAAAAGCATAAAAAGATATACAGATAAGGAAAATTGTTTTTATACAAGCAAGGAGACAAGTTAAAATTTTATCATTTAGTGTGCCAGTTTGATTACCAACAGTCAGAGCAGCAGGTGAAGCAGTTCATCCATGTATGCTAACTTTTTATGTGATTCGGCTCTATTTTTCTCCTATTCTGAAGCCTCTGCTTCTCAATCTTGATGGTGAGGGAAGAGAAATGTTATGTATGATGGCAGTAGAAGAACCTTTATCACATAGGTATTGGTGGAATCTATCTAGACTGGATTCATACCTGGAGACAACATAGAGTTGCTTCTGACTTTGTTGTTAATGCTTTGATTTTATTAATGAGAAGTGCATGTCTGAGTCAGTTGTCACCAATATTTTACAGGAGTTGGAAAGGGAGAAAACTGCTCGTTTGGATCAAGAAAGGGCCGCTCGTTCTACTAATTATGTGCCTGATCAGAGCCCAATAATGAAGCAGAAATCTGGGATAGAAAATGGTAGTTAATACCAAATTTAGTTTTCAATATGATGCTTCATACATTTATGTTATTGCTACTGTTCTCTTCTCCATCATGTTTAACATTCTCTATTGTTTAACATGGTTGCTTCACTTCTGTATTTCCCTTCCCGTACTTGATTTTTCTTGTGCTTTACTTGAACCGAGGGACTATCGGAAACAACCTCTCTCTACCTTAACAAGGTAAGGTAGGGGTAGGCTGCGTACCGCCCTCCCCATACCCCACCTGTGGGATTACACTGAGTATTATGTTGTTGCTGCTGCTGCTGACGTTGTTGTTTAACAATCACCTAGTTGCAGGAAGTTTGACACGCAGACTTTCGAGTGCTAGCAGCTTGAGTAGTATGGAGGAAAGCTATTTTCTGCAAGCATCTTTGGACTCGTCTGACAATTTATCTGAGCGTAGAAATGCATTAGAGGGTAATATAAGTCCATACTTTATGAAGAGTATGACGCCTGCATTTCGCCAGAAAGATGGGGAACTTGCGTCTTATATGTCTCGAC</genome_strand>
        <mrna_strand>TAAAGAAGATATGCTTTGTAAAGAAATAGAAGATCTCCAGAAAAGATGCGCG..................................................................................GCCAGTGAACGTCGATGTGAGGAGTGGATAACACACGTTCCCGAATTTACCAGACCTCTTCTTACGCACATAGAAGTCATGCAG.......................................................................................................GAAACAAACTCCAAAAAGGCTGAAGCTTGGGCTGCTGTTGAGAGAACCTTGAATTCACGTCTTCAG.......................................................................GAAGCCGAGGCAAAAGCTGCAACTTCAGAAGAAAAGGAGCGATCTATTAATGAACGCCTTTCTCAAACCCTATCCCGAATCAATGTTCTTGAGGCTCAG............................................................................ATATCTTGTCTTAGAGCTGAGCAGACACAGCTAACAAGGTCCCTTGACAAAGAGAGACAGCGGGCCGCAGAGAATAGGCAAGAATATCTTGCTCTAAAGGAGGAAGCTGAGACTAACGAAGGTCGTGTGAATCAGCTTGAAGAGGAAATTAAAGAACTCAGAAGGAAACACAAGCAGGAAATACAAGAAGCATTAACTCATCAGGAACTCCTGCGGCAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTTGGAAAGGGAGAAAACTGCTCGTTTGGATCAAGAAAGGGCCGCTCGTTCTACTAATTATGTGCCTGATCAGAGCCCAATAATGAAGCAGAAATCTGGGATAGAAAATG..........................................................................................................................................................................................................................................................................................................................TTGCAGGAAGTTTGACACGCAGACTTTCGAGTGCTAGCAGCTTGAGTAGTATGGAGGAAAGCTATTTTCTGCAAGCATCTTTGGACTCGTCTGACAATTTATCTGAGCGTAGAAATGCATTAGAGGGTAATATAAGTCCATACTTTATGAAGAGTATGACGCCTGCATTTCGCCAGAAAGATGGGGAACTTGCGTCTTATATGTCTCGAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C00HBa0081D06-3cnAc/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U325537" ref_strand="+" ref_description="SGN-U325537        Tomato 200607 #1 [5 ESTs aligned] arabidopsis/peptide: AT1G79820.2 | Symbol: None | hexose transporter, putative, similar to hexose transporter GI:8347246 from (Solanum tuberosum); contains Pfam profile PF00083: major facilitator superfamily protein | chr1:30026935-30032170 REVERSE | Aliases: None (evalue: 9e-179, score=624) genbank/nr: Sugar(evalue: 0, score=639)">
      <seq>ttttccttttttaattaatttctttctaaaacttcactaccaatatgcaatagctagtgcctcacaaaacgtttcaggaggttggcgtatatgattgggatttttgttacagtaccatagatcagatcacacaatatgagaggtggtggtcttgcagatgcttactccatgtacaagcgtgcatcaactaaagaccagttcactgattatgaagatagagaagaaaatctagatcgtgccgaaaatggtgtgtggaaagaaattggaaacccctcatggaagcggccgttgccacatatactggtggcaattatttcatcactcttgtttggctaccatcttggggtggttaatgacactctagaaagcatgtctttggaccttgacttcagtggcagcaccttggcggaaggtctagttgtgagtacatgtttgggaggtgctcttttgggctctatattcagtggttggatagcagatggggttggtcgtcggagaggctttcaactgtgtgctctaccaatgattataggtgcttctatgagtgccgcaaccagtactcttggagttatgcttcttggaaggttatttgttggaatagggatgggccttggccctgctgttgctgctctctatgttgcagaggtttcaccagcttttgttggaggcacttatgggagtttcactcagatcgccacatgccttgggctcctgggatctcttctcattggaattcctgccaaggatactgctggttggtggcgagtttgcttttggatatccaccattcctgctgcaatacttgctgttttgatggaattctgtgccgagagtcctcactggcttgttaagagaggaagaattgatttagctgaagaagagcttgaaaagcttatgggagcaccacatgttaaatatgccattgcagaaatgtcaaagacagacaaaggagatgaggtggataatgttaggtttggagagctattgtatggtcgccattttaaagtggttttcattggatctgccttatttgctttgcaacaactatctggaataaatgctgtattttatttctcttcaactgtgtttaagaaggctggagtacctacggacactgcaaatacatgtgttgggattgtaaacttaacagggtctattattgcaatgatgttgatggataggcttgggaggaaggtgcttctaattgggagttttttgggcatggcagtcgcaacaggtcttcaagtagcagctgcgagttcatttgtaccaagctttgcagtattatacctatcagttggcgggaccctactgtatgtgttagcattttctttgggtgctggtccagtccccagcctcctgctgtcagagatatttcctggccggattagagcaaaggcaatggctttatgcatggctgcacattgggtcataaattttttggtcggccttctgtttctgccgatgcttgagcatcttggaccacaaatagtttatgcgatctttgcaggattttgcttgtttgcactggcttttgtgaaaaagaatgtggtggaaacgaaagggaaaacattacaggagattgagtttgcccttcttccatctcattagttggtgactagatcacactctatactaaagttcagattggaaaatgttaaggtcctagtgattgaacatccaaattctttgctatagctatttcttgatttgtacaatttcggagtgtgttcataggcaggaaaggcagcaacaatgaacaatcaagataaagattgtcacaaagcgagttttcatagggcaattgtcactctgcttatttttgctgcttttttgctcactccactggtcggtgactattgcctgagggagcatgaaactgcatctgcctcggccagtagtagatcacatatgtactacagagtacctattgttgttatctttgtatacctttcttttaatttttaccttgatctgatttttgtaattagcatgacacggaaaggctactctaaacattccttacagaaataatgttacagattttgaattagcaagatactggtagctgctctgctgtaacaagaaatattggtagtattgtagtatacaattgattaatgttagctgagatttttcaaaaaaaaaaaaaaaaaaactcgag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C00HBa0081D06-3cnAc/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C00HBa0081D06.1" temp_strand="+" temp_description="C00HBa0081D06.1  AC218144.2 htgs_phase:3 submitted_to_sgn_as:C12HBa0081D06">
        <position start="81505" stop="116995"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81805" g_stop="81884" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="80" r_length="80" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81885" i_stop="82015" i_length="131">
            <donor d_prob="0.974" d_score="1.00"/>
            <acceptor a_prob="0.978" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82016" g_stop="82167" g_length="152"/>
          <reference_exon_boundary r_type="cDNA" r_start="81" r_stop="232" r_length="152" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="82168" i_stop="82606" i_length="439">
            <donor d_prob="0.799" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="82607" g_stop="82718" g_length="112"/>
          <reference_exon_boundary r_type="cDNA" r_start="233" r_stop="344" r_length="112" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="82719" i_stop="82841" i_length="123">
            <donor d_prob="0.655" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="82842" g_stop="82909" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="345" r_stop="412" r_length="68" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="82910" i_stop="83243" i_length="334">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.179" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="83244" g_stop="83376" g_length="133"/>
          <reference_exon_boundary r_type="cDNA" r_start="413" r_stop="545" r_length="133" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="83377" i_stop="83781" i_length="405">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="83782" g_stop="83881" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="546" r_stop="645" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="83882" i_stop="83945" i_length="64">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="83946" g_stop="84058" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="646" r_stop="758" r_length="113" r_score="0.991"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="84059" i_stop="84315" i_length="257">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="84316" g_stop="84409" g_length="94"/>
          <reference_exon_boundary r_type="cDNA" r_start="759" r_stop="852" r_length="94" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="84410" i_stop="85765" i_length="1356">
            <donor d_prob="0.881" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="85766" g_stop="85919" g_length="154"/>
          <reference_exon_boundary r_type="cDNA" r_start="853" r_stop="1006" r_length="154" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="85920" i_stop="86007" i_length="88">
            <donor d_prob="0.957" d_score="1.00"/>
            <acceptor a_prob="0.977" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="86008" g_stop="86151" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="1007" r_stop="1150" r_length="144" r_score="1.000"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="86152" i_stop="86242" i_length="91">
            <donor d_prob="0.961" d_score="1.00"/>
            <acceptor a_prob="0.980" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="86243" g_stop="86316" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="1151" r_stop="1224" r_length="74" r_score="1.000"/>
        </exon>
        <intron i_serial="11">
          <gDNA_intron_boundary i_start="86317" i_stop="86427" i_length="111">
            <donor d_prob="0.048" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="12">
          <gDNA_exon_boundary g_start="86428" g_stop="86516" g_length="89"/>
          <reference_exon_boundary r_type="cDNA" r_start="1225" r_stop="1313" r_length="89" r_score="1.000"/>
        </exon>
        <intron i_serial="12">
          <gDNA_intron_boundary i_start="86517" i_stop="86914" i_length="398">
            <donor d_prob="0.831" d_score="1.00"/>
            <acceptor a_prob="0.942" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="13">
          <gDNA_exon_boundary g_start="86915" g_stop="87029" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="1314" r_stop="1428" r_length="115" r_score="1.000"/>
        </exon>
        <intron i_serial="13">
          <gDNA_intron_boundary i_start="87030" i_stop="88305" i_length="1276">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="14">
          <gDNA_exon_boundary g_start="88306" g_stop="89017" g_length="712"/>
          <reference_exon_boundary r_type="cDNA" r_start="1429" r_stop="2140" r_length="712" r_score="0.999"/>
        </exon>
        <intron i_serial="14">
          <gDNA_intron_boundary i_start="89018" i_stop="89645" i_length="628">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="15">
          <gDNA_exon_boundary g_start="89646" g_stop="89669" g_length="24"/>
          <reference_exon_boundary r_type="cDNA" r_start="2141" r_stop="2164" r_length="24" r_score="0.667"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C00HBa0081D06.1" gen_strand="+" ref_id="SGN-U325537" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>2164</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C00HBa0081D06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U325537" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81805" e_stop="81884"/>
          <exon e_start="82016" e_stop="82167"/>
          <exon e_start="82607" e_stop="82718"/>
          <exon e_start="82842" e_stop="82909"/>
          <exon e_start="83244" e_stop="83376"/>
          <exon e_start="83782" e_stop="83881"/>
          <exon e_start="83946" e_stop="84058"/>
          <exon e_start="84316" e_stop="84409"/>
          <exon e_start="85766" e_stop="85919"/>
          <exon e_start="86008" e_stop="86151"/>
          <exon e_start="86243" e_stop="86316"/>
          <exon e_start="86428" e_stop="86516"/>
          <exon e_start="86915" e_stop="87029"/>
          <exon e_start="88306" e_stop="89017"/>
          <exon e_start="89646" e_stop="89669"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTCCTTTTTTAATTAATTTCTTTCTAAAACTTCACTACCAATATGCAATAGCTAGTGCCTCACAAAACGTTTCAGGAGGTAATTAACAAGTGTATTATATGTTAATGGCACATAATTAAAGAATGAAATGCAAAAGATTAGATTTTTTATTTATTTTTTTGATTGAAGTATGGAATTTTGCCTTGATATCAGATCTGGCATTTGGGCAGGTTGGCGTATATGATTGGGATTTTTGTTACAGTACCATAGATCAGATCACACAATATGAGAGGTGGTGGTCTTGCAGATGCTTACTCCATGTACAAGCGTGCATCAACTAAAGACCAGTTCACTGATTATGAAGATAGAGAAGAAAATCTAGGTACCCCTTACACTGTTTTCTTCCGGATGGATCTAAGATTTAGAAGCATTGTCTACCAATGCAGTATATTCTAGTACAATTTTTTAAGATATTGTACGAGCAGAAAGGAACATGTTAATTTTGCTGCAAATTCATCTGGGGTTAAAGGGGTGTGCATGAGAATGGTTTTTTTTCTTTCTAATTTTAAATAATGCCTAGATCTATAATCTATTTCTCTATGTTGTTCCAAATTATGAAATCATCAAGTTTCAATTTTTATATCTTTTTGCCAAGAAATAAAAATTTGCCAACTTGGTTGAATGATGTCATCCATTTTCCAATTAATAGTATAATACTCTTCTAGTGTACCATTAGCTTAGAGACAACAATAGGACATAACATAAAAGGATATAATTTTGTGTAAATTGACTTTTGATTCTTCTTCCTTGTGTCTATTTAGATCGTGCCGAAAATGGTGTGTGGAAAGAAATTGGAAACCCCTCATGGAAGCGGCCGTTGCCACATATACTGGTGGCAATTATTTCATCACTCTTGTTTGGCTACCATCTTGGGTATGACTGAACTTTCAAATTTGGTTTCTTGCATAAAGCCTACCTTTTTAGTTGGTTAAACATTGACCTTGTTGACCATTTTCTATTTTTATTTTTAAAACTACTTTGGTTTGGTTTATTCAGGGTGGTTAATGACACTCTAGAAAGCATGTCTTTGGACCTTGACTTCAGTGGCAGCACCTTGGCGGAAGGTATTTTACGCCATTTACCTTAAAGATTCCCCTGCGCCCCAGCTCCTGCCACCTGAACTTCTGTGTGTCCGCCTCTCTAGGAGGATTCTTAATTTTTAGTTGGTGGGGGGAATCCACTACTCATTTGTGACAGAGCATGCTACATTTCAATAACTATAGATGTTATTTTTTATTTTATTTTGTTATATTAATATATACAGTGATCGAGTCCAAGGCAGTGATGTCAATCAAACCTATTGTCTAATACTTGCTTATTCAAAGAAGATTCTCTTCATCTAGTTGCTTAGTTCAATGCCTACAGGGTCCTTCTGATATGATAATTCTATTTTCAAAGGTCTAGTTGTGAGTACATGTTTGGGAGGTGCTCTTTTGGGCTCTATATTCAGTGGTTGGATAGCAGATGGGGTTGGTCGTCGGAGAGGCTTTCAACTGTGTGCTCTACCAATGATTATAGGTGCTTCTATGAGGTAAAACCTTAATAAACTTTTTACTAGCTATATTACGGCCTTTTCAACTTTGAATGCGACCATGAACATTTACTTTGTAATACCGTCTAAATATTGTGTAGTCTTGAATCCTCTTCTGTTCATTGTATAACCTGCCTTGGATGAATGGATGGTTTAAAAGAAAGTGTATAATCCCTTAGGGGATGCTTAGTCTTGCTATATTTTGCATTGGCAAACTCTCCTGCAGACTTATTCTTAAGAGTCTTGTAAAGGTCATTTATATAGCCAGGGGTGTTTGAGTTTTCTTTTCATGTTTAAGTTATTGAATTATATAACCTGGAGCGAATACGGAAATTTTTAATTCAAATCTATTTCTGTACGAGTTTCCGGAAATTAGCTGAAGGTTCTTCAACTTCATAAATGTAGTGCCGCAACCAGTACTCTTGGAGTTATGCTTCTTGGAAGGTTATTTGTTGGAATAGGGATGGGCCTTGGCCCTGCTGTTGCTGCTCTCTATGTTGCAGAGGTATATGATATTATCTTTTGCTCCTAATTCTATCTTTTTAGTTACATTTAATTTGTTTGACCAGGTTTCACCAGCTTTTGTTAGAGGCACTTATGGGAGTTTCACTCAGATCGCCACATGCCTTGGGCTCCTGGGATCTCTTCTCATTGGAATTCCTGCCAAGGATACTGCTGGTTGGTAAGGATTGTGTGACCTTAATCTTCCTTTTTATTATTAGTAAAATCAATTGATAAGCCTGGCTGATAGGAATGAAGAAAATGTACTATTCCATTTTATCCAGTCACTGTTTGGAATAAACTTTCTTCAGTTTGAGACTGCTAAACTGCTTTTTATGGGAGAATATTAAGAATAAGTCAATTATCCTACATGTTTATAGCATTCCGTTAATTAATTGAGTGATGTGAACTATAACTACTTCTAAAATGATGTCACAGGTGGCGAGTTTGCTTTTGGATATCCACCATTCCTGCTGCAATACTTGCTGTTTTGATGGAATTCTGTGCCGAGAGTCCTCACTGGCTTGTTAAGGTTGGTTATTAAGCTCATAAGTCATTGAGTGTCTTGCAGTGGATAGAGAAGTGGCATTTGTAAATTCAATTTTTTTGTGAATCTTGCAAATAGTAAAATCTGTTGACAATTCACTAGGTCATCAATTGGAAGAAGCTCTTCTTTATTTCAGTTGACAAGTGAATACCTGAAATGCATATGTGGGCAGTCTGTTTATAAACTACTGCTTGGCTCCTATCTTGAATATATGTTTACAAATCTGTTCTATGTACTCATACTCTAAATTTTAGTACAATCCATTGAATGTTGGGCATTTTAGTGTCTTTTTAACCACGTTCTCTTACAAGGCAACATAATGAAATAACTGAAGGCGATAGAATCTTTACTAATTCCAACAACATTATCCTGATTGCTATCTCTATACATTGATGGGCTTGTGAGCTTCCTGTGCACAATAACTTAGCAGGTTTTAAGTGCAACTCTACTATTGAGAGAAACATTATTGGTTCACTCCTGCCACATTTTGTCTTTGGTCCCTGATACTTGATGTAATACTAGATGTAAGAACAATTAATTGAACCACAATTAAACAAACAAGAAAAGATGCAAGGATATGATTGATAAATAAAAATGAAGGGAATAGACTTCAGAAGAAAAGAAGGGATAATCTAACAATTAAAATACATTAATCATCAGATTCAATCCAAGAGGAAGAGAAATGAACTCATACATGGAAATCCTTACTTAGAGTATTCAAGAAAGGTTCAGTGAAGAGATACCAAGGAAATCTCCTATAAACTCACACAAAGAGTATTTCTCTATCTTCAAAACTTAACTATCCCTAATATGAAGACTAAAAACTATTTATACTAGTCTTGCAAAAATGCCTAGATTAAAAGAATAACCAAATAATTAAAATAGCCACTTGAGCATGTTAGTTGCCTTGAAGTCTTCCTTGCATGCTTCCTTTTATCCTTTAAACTCATGATGGTTGAAAGAATGCTCAAAAGTCCTTGATGACCTATATGGTTGTCGTCATTTCCCTCATGAATATATTTGAGCATGTTACGAACTTTAAAAGCTCTTTTAATGAATCTTCCATGACACTTTGCTCCTCGTGGATGATTGAAAGATTCCAAATCCAAGATAGCCCACACCCTCGTTGTTGATATCAATCCTGCTACCTCAATTTGCATCAATACTAAAGTCAAGACTACACCGTATTTATACCATAATATAGTTAGCGTGTTGTACTTATCAAAATAAAAGCGGGTATATTATTATGGTGCTTCTATGCAGGATATTCTTGATTTACAAACACTCAGCAGCTCATGGTTCTCTAATATAACTCACATTTTATTTCTGGACTTCTCTCAGAGAGGAAGAATTGATTTAGCTGAAGAAGAGCTTGAAAAGCTTATGGGAGCACCACATGTTAAATATGCCATTGCAGAAATGTCAAAGACAGACAAAGGAGATGAGGTGGATAATGTTAGGTTTGGAGAGCTATTGTATGGTCGCCATTTTAAAGGTATAATTATTGATGATGTGTTCCCATTCTGTCAATATTTTTCTGTGTGAATAAGTTGATGAATTTATAACTTTTGCTGTTTGTACAGTGGTTTTCATTGGATCTGCCTTATTTGCTTTGCAACAACTATCTGGAATAAATGCTGTATTTTATTTCTCTTCAACTGTGTTTAAGAAGGCTGGAGTACCTACGGACACTGCAAATACATGTGTTGGGATTGTAAACTTAACAGGTAAACATATCCCCTCACCACACAAAACAGGTATAACACTCTTGAATCTGTTAGTCATTTCTCATTTCGCTGTTGCCTATAACATCTACAGGGTCTATTATTGCAATGATGTTGATGGATAGGCTTGGGAGGAAGGTGCTTCTAATTGGGAGTTTTTTGGGCATGGTAACCTAATCTTGTTTGCTCAATCCTTTGTGCTTACCATGGCCGGTCTTAGAATCGTGTCACTATATTTTGCTTTCTCATTCTTAAACTTCTGAGTTGTTTTTGGTGCAGGCAGTCGCAACAGGTCTTCAAGTAGCAGCTGCGAGTTCATTTGTACCAAGCTTTGCAGTATTATACCTATCAGTTGGCGGGACCCTACTGTGAGTAATCCACTTCAAGATTGTTGTTGTAGTAGTTGATGCATTAAATATATTGATAGAAAGGACTGGAAATGCTCGTTATGCTTTAATGATTAGATAACTATCAGAGGCTTATAATTCCTTCCTTCTGGGAAAGTTAATTCTTTGTCCAACAAAGAGAAGTCAGTAAAGCAGCTAAGAGATGAAGATAAGTAGTTTCGGTACTGCTTCTGTGGATAACAGTTTTCAATTGCATTCTAGTCATTATGTACTTGGTAACTGTTGACTCTGGTTAAATCAATGAAAGATGAGACAATTTTATGCTATAGGTAGCTTTCTTGACTATTAAGGAGATACTACAAATGCACAGATGCAATGGCCAGTTGTTTTCTTCAATAATGGGAAATTATTTATGTTAGGTATGTGTTAGCATTTTCTTTGGGTGCTGGTCCAGTCCCCAGCCTCCTGCTGTCAGAGATATTTCCTGGCCGGATTAGAGCAAAGGCAATGGCTTTATGCATGGCTGCACATTGGGTACTTTCATCCTGCCCTTGATATTTTATTTTATTTTTGCAAATTATTCTCTTTGCTTTGACCTTGGATGAAGAATAGAAGATCCTTTGGAACTTTGTGTCTGACAACTATGATCTATATGACACTACATATTGTTCTTATACGAACCATTCAAGTCTTAATAACTTTTCACATCAGATTCTTCTTTTAATCATTCTTTTGTTTCATCTTTTTTTTTTTTTTGTGGGTGGGTTGGGGTGGAGTGTGTGTGCTGTGGTCCAAACAGATCAAGATGGATGTCGAGGATTCATATGGCCAACTCTTAACTAGTTTGCAGGTTGATGCACAATACTAGTTGTTGAGGGAGGAGAGGAGATGTATTCCCTTATTATTTCCGGTAGTATCTCGGAATTTACACATTTAATCGAAACACATCTCCCATTGGGTACTATATGTTCTAGATTCCCAGTCATTTGAAACGAGTCGCTGCTGAAATGAAAGCATCAGCCACATCCTGCTATTAGGTGTAAGTCAAATAAGATGGGTAGATTCATCCATCACCGTGCGATATTGACTGTCGGATATATATTAAAAAAAAAGAACATTATCCATCACGAGGAAGAGAGCTGTTCTGTCTGCACAATGACACAGTCTACTTAAGTGTTAGTAATAATTAAATCTTGCCCCCTCCACCTCTAACCCCCCCCCCCCCCCCCCTTTTTTTTTTTAACTGCCAAGAACCAGAAAATGAACCATTTAATGTGATGGGGAAATCTAGGGGTATCCTAGTTCATCCCAAAATTTCTAATGCAGTATTCATTTTGTATTCTTAACTTCAAATAAGAATCTAATCTTTGCACATGACCAACCCTTTGACTCTCTGACCCAGTGTTGGATGATCAAAGAGTTTTGTGCTTAAAATAAAATTCTTCCCGGAAGACTTTTGAGTTTTGACATCATTTAAGAGAGATCTAAACCTAGCTGGTAAACTCTATATACTGTTCTAAATACAAATTGATATGAGATAATCTTTTACATCTCAAAATGAAAAAAAAAAATGAGATCAGGCATACTACTTATGTCCTTTCACATTCTGGTTTATGTGTGGTTCAGCTACAGCAGTAATTTAAAATTATTTAAGTGTTCTCAGCACTTTGCTTTTTATTTTAATTGTTGTTGTCATAGCTTTTGTTTTATCCGAAATCTCAAGAAAACATCATAGATTTTGTTAGACTGATGCTTTCATTTCATCTTTCTTTCCCAATGTATTCTTATCGTATATTTTGCTCTTTAACAGGTCATAAATTTTTTGGTCGGCCTTCTGTTTCTGCCGATGCTTGAGCATCTTGGACCACAAATAGTTTATGCGATCTTTGCAGGATTTTGCTTGTTTGCACTGGCCTTTGTGAAAAAGAATGTGGTGGAAACGAAAGGGAAAACATTACAGGAGATTGAGTTTGCCCTTCTTCCATCTCATTAGTTGGTGACTAGATCACACTCTATACTAAAGTTCAGATTGGAAAATGTTAAGGTCCTAGTGATTGAACATCCAAATTCTTTGCTATAGCTATTTCTTGATTTGTACAATTTCGGAGTGTGTTCATAGGCAGGAAAGGCAGCAACAATGAACAATCAAGATAAAGATTGTCACAAAGCGAGTTTTCATAGGGCAATTGTCACTCTGCTTATTTTTGCTGCTTTTTTGCTCACTCCACTGGTCGGTGACTATTGCCTGAGGGAGCATGAAACTGCATCTGCCTCGGCCAGTAGTAGATCACATATGTACTACAGAGTACCTATTGTTGTTATCTTTGTATACCTTTCTTTTAATTTTTACCTTGATCTGATTTTTGTAATTAGCATGACACGGAAAGGCTACTCTAAACATTCCTTACAGAAATAATGTTACAGATTTTGAATTAGCAAGATACTGGTAGCTGCTCTGCTGTAACAAGAAATATTGGTAGTATTGTAGTATACAATTGATTAATGTTAGCTGAGATTTTTCAATATTTGTCTTCAGTTTCTGCATTGATTTTTCCAGTTGGGTGTGTTTGGTACGAAGGAAAATGTTTTCTTGAAAACAAGTGGGCTTCTTGCTAGAAGTTCACAGGAAATGTCTTAGAAATTTAAAAAAGTGAGTCTTGGTTGTAGACTTGTATCATTATGCATACAAGATATAGTTTGAATGTTAGATGATTATTCCATAATGAAAAATATGTACAATCTAGTCATGTGTTGACTTTAGGGTTATCTAATGATGATATAAACGTGTCTTGTTTTATTATATGAAAAATAGTGGCTAATTAGTCTGAAAAATTAGATATTCAATCTTCTGTTTTAATGCACTACACGTCTCTACTATTGCAAGTTGACTTTGAATAACTACCTTTCTGAATATCATTATTTTTTTGTTCATTTTCTAAGTTAACAGCAAGTCTTACATATGACCTTGGGCATTTTCCTAGCACAGAGATAAAAGATTGACTCTGAAGAGAATACTTTGAAGAGCGAAATATAATACGAGGATAGTCTAAATAATATTACTTGATCAATGCCAATCTCACAATTAGAGAGATTGTTTTCGAAAGATGCATCGATTCAAAATCAAAAAGAGAATAGTATAATTAAAATGCAAATCAAACAAACAAAAAAAGGGAC</genome_strand>
        <mrna_strand>TTTTCCTTTTTTAATTAATTTCTTTCTAAAACTTCACTACCAATATGCAATAGCTAGTGCCTCACAAAACGTTTCAGGAG...................................................................................................................................GTTGGCGTATATGATTGGGATTTTTGTTACAGTACCATAGATCAGATCACACAATATGAGAGGTGGTGGTCTTGCAGATGCTTACTCCATGTACAAGCGTGCATCAACTAAAGACCAGTTCACTGATTATGAAGATAGAGAAGAAAATCTAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGTGCCGAAAATGGTGTGTGGAAAGAAATTGGAAACCCCTCATGGAAGCGGCCGTTGCCACATATACTGGTGGCAATTATTTCATCACTCTTGTTTGGCTACCATCTTGG...........................................................................................................................GGTGGTTAATGACACTCTAGAAAGCATGTCTTTGGACCTTGACTTCAGTGGCAGCACCTTGGCGGAAG..............................................................................................................................................................................................................................................................................................................................................GTCTAGTTGTGAGTACATGTTTGGGAGGTGCTCTTTTGGGCTCTATATTCAGTGGTTGGATAGCAGATGGGGTTGGTCGTCGGAGAGGCTTTCAACTGTGTGCTCTACCAATGATTATAGGTGCTTCTATGAG.....................................................................................................................................................................................................................................................................................................................................................................................................................TGCCGCAACCAGTACTCTTGGAGTTATGCTTCTTGGAAGGTTATTTGTTGGAATAGGGATGGGCCTTGGCCCTGCTGTTGCTGCTCTCTATGTTGCAGAG................................................................GTTTCACCAGCTTTTGTTGGAGGCACTTATGGGAGTTTCACTCAGATCGCCACATGCCTTGGGCTCCTGGGATCTCTTCTCATTGGAATTCCTGCCAAGGATACTGCTGGTTG.................................................................................................................................................................................................................................................................GTGGCGAGTTTGCTTTTGGATATCCACCATTCCTGCTGCAATACTTGCTGTTTTGATGGAATTCTGTGCCGAGAGTCCTCACTGGCTTGTTAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGGAAGAATTGATTTAGCTGAAGAAGAGCTTGAAAAGCTTATGGGAGCACCACATGTTAAATATGCCATTGCAGAAATGTCAAAGACAGACAAAGGAGATGAGGTGGATAATGTTAGGTTTGGAGAGCTATTGTATGGTCGCCATTTTAAAG........................................................................................TGGTTTTCATTGGATCTGCCTTATTTGCTTTGCAACAACTATCTGGAATAAATGCTGTATTTTATTTCTCTTCAACTGTGTTTAAGAAGGCTGGAGTACCTACGGACACTGCAAATACATGTGTTGGGATTGTAAACTTAACAG...........................................................................................GGTCTATTATTGCAATGATGTTGATGGATAGGCTTGGGAGGAAGGTGCTTCTAATTGGGAGTTTTTTGGGCATG...............................................................................................................GCAGTCGCAACAGGTCTTCAAGTAGCAGCTGCGAGTTCATTTGTACCAAGCTTTGCAGTATTATACCTATCAGTTGGCGGGACCCTACT..............................................................................................................................................................................................................................................................................................................................................................................................................GTATGTGTTAGCATTTTCTTTGGGTGCTGGTCCAGTCCCCAGCCTCCTGCTGTCAGAGATATTTCCTGGCCGGATTAGAGCAAAGGCAATGGCTTTATGCATGGCTGCACATTGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCATAAATTTTTTGGTCGGCCTTCTGTTTCTGCCGATGCTTGAGCATCTTGGACCACAAATAGTTTATGCGATCTTTGCAGGATTTTGCTTGTTTGCACTGGCTTTTGTGAAAAAGAATGTGGTGGAAACGAAAGGGAAAACATTACAGGAGATTGAGTTTGCCCTTCTTCCATCTCATTAGTTGGTGACTAGATCACACTCTATACTAAAGTTCAGATTGGAAAATGTTAAGGTCCTAGTGATTGAACATCCAAATTCTTTGCTATAGCTATTTCTTGATTTGTACAATTTCGGAGTGTGTTCATAGGCAGGAAAGGCAGCAACAATGAACAATCAAGATAAAGATTGTCACAAAGCGAGTTTTCATAGGGCAATTGTCACTCTGCTTATTTTTGCTGCTTTTTTGCTCACTCCACTGGTCGGTGACTATTGCCTGAGGGAGCATGAAACTGCATCTGCCTCGGCCAGTAGTAGATCACATATGTACTACAGAGTACCTATTGTTGTTATCTTTGTATACCTTTCTTTTAATTTTTACCTTGATCTGATTTTTGTAATTAGCATGACACGGAAAGGCTACTCTAAACATTCCTTACAGAAATAATGTTACAGATTTTGAATTAGCAAGATACTGGTAGCTGCTCTGCTGTAACAAGAAATATTGGTAGTATTGTAGTATACAATTGATTAATGTTAGCTGAGATTTTTCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAAACTCGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C00HBa0081D06-3cnAc/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U324141" ref_strand="+" ref_description="SGN-U324141        Tomato 200607 #1 [6 ESTs aligned] arabidopsis/peptide: | Symbol: None | expressed protein, similar to PGPS/D12 (Petunia x hybrida) GI:4105794; contains Pfam profile PF04749: Protein of unknown function, DUF614 | chr1:19445744-19447094 REVERSE | Aliases: F9I5.19, F9I5_19(evalue: 5e-57, score=217) genbank/nr: Uncharacterized(evalue: 1e-58, score=229)">
      <seq>atactatttggataacaatgggaagagttgaagcaaacaatgaaggagaaacatctcaggcagagagtggtactgaaccagctgcctcacagcctcaacagttccaaggagtacaaagtgtgtatcagtcaccatcacacttaacaattggagctccttggagtactggcttatttgattgtcatctggaccaaactaatgctgtcatgacggcgttcttaccttgtgtaacatttggacaaatagcagaagtccttgatgcaggacaaatgacatgccctttggggactttcatatacatgctgatgatgcctgctgtctgctctcagtggatcatgggctcaaaatatagaacccaattgagacaaagatataatctagtggaagctccttattcagacatgatttcccatatgttctgtccatgttgctctctttgtcaagaattcagagagcttcgaaacaggggacttgatcccgctctagggtggaatggtatagttgctcagcgacactatgggaaccaacaagtgaatcaagctcctcaagtacaatccatgtcaatgtaaaaattcaagattgtgattctttatttgtttgatttgaggttgtggtgtgttagtaaaaaccagattctgttcatgtttgaagttgtatccttaaaactcaaccatattgttggctgtgttagttgtttgaactatgtttttacaaccccaattcgagttagattataaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C00HBa0081D06-3cnAc/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C00HBa0081D06.1" temp_strand="+" temp_description="C00HBa0081D06.1  AC218144.2 htgs_phase:3 submitted_to_sgn_as:C12HBa0081D06">
        <position start="89747" stop="97220"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90047" g_stop="90247" g_length="201"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="201" r_length="201" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="90248" i_stop="90675" i_length="428">
            <donor d_prob="0.894" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="90676" g_stop="90747" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="202" r_stop="273" r_length="72" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="90748" i_stop="90857" i_length="110">
            <donor d_prob="0.610" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="90858" g_stop="91070" g_length="213"/>
          <reference_exon_boundary r_type="cDNA" r_start="274" r_stop="486" r_length="213" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="91071" i_stop="96665" i_length="5595">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="96666" g_stop="96924" g_length="259"/>
          <reference_exon_boundary r_type="cDNA" r_start="487" r_stop="745" r_length="259" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C00HBa0081D06.1" gen_strand="+" ref_id="SGN-U324141" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>745</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C00HBa0081D06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U324141" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="90047" e_stop="90247"/>
          <exon e_start="90676" e_stop="90747"/>
          <exon e_start="90858" e_stop="91070"/>
          <exon e_start="96666" e_stop="96924"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATACTATTTGGATAACAATGGGAAGAGTTGAAGCAAACAATGAAGGAGAAACATCTCAGGCAGAGAGTGGTACTGAACCAGCTGCCTCACAGCCTCAACAGTTCCAAGGAGTACAAAGTGTGTATCAGTCACCATCACACTTAACAATTGGAGCTCCTTGGAGTACTGGCTTATTTGATTGTCATCTGGACCAAACTAATGGTAAATTAAGTTTATTACTGTCATTGTTAAGTGTCCTATTTGTGTGGGATGAGTTAGTTGGTCTCTTGTTAAATGTTTTAGGGGAATCTGAGTTAGCTTTTGAGGTTGAGTGAGACTGAATGTTCATTTATCTTTCATGGTATCAAAGATAGACTCAAATCAATTCTTGGTTTACTCGATGTTTGGCCTTTATGTTATGTTGTTCACACTTTAGATGTCCAGTCCTGGTGGCGTGGGGGAATATTGGTCAATCATCACCTCTTGAGCTAGTTTTTAAAATTGATTTAGGCCCAAAAATTCATTGTTTTATCATGGTACCAGAGTTAACTTTGTTGTGTGGGGATATTGGAATCCCAACATCTTCACATTTGTTTGACTTAAAATCCTTGATCCGCTTCTAAAAATTACATTCTTGTTTGTTTGTACAGCTGTCATGACGGCGTTCTTACCTTGTGTAACATTTGGACAAATAGCAGAAGTCCTTGATGCAGGACAAATGAGTAAGTTTCCCAGTCGACCCATCTTACTTGTCGGTATACAGAAGTTAAAACTCTTTGAATAAACCAATACTAAAGTTTGATATTTTTTGTGTGTTTGGTGATTAATGCAGCATGCCCTTTGGGGACTTTCATATACATGCTGATGATGCCTGCTGTCTGCTCTCAGTGGATCATGGGCTCAAAATATAGAACCCAATTGAGACAAAGATATAATCTAGTGGAAGCTCCTTATTCAGACATGATTTCCCATATGTTCTGTCCATGTTGCTCTCTTTGTCAAGAATTCAGAGAGCTTCGAAACAGGGGACTTGATCCCGCTCTAGGTATGTCATGTCACGCTTGGTTACAATTAATATTCTACTACCTGTCTCGTTCATCTAAAAACTTAAACTAATAGAATGACGATGAGACTCTTTAAGCCACGAATATCTTAACATTGTTACTGTTAAACAAAAGAACAGCACATGCTTAGAGGATCTCCATTGATGGAGATTAAGGAAGAAGAGAAGAAGAAGTGAGAAAGAAGAGATAGAACTCAACTCTTCTGTGATCTGAATTGATAAGAGTTGTGGAAAACACAATACAAAGAAGAAGATTATAATGAATCTGTAGCAGCCATTTATATAGCTAACTAACAGAGTATTAACAACTAACCAACTTCTAACTAACTAATGGAAATATAACTAACTAATAACTAACTAGTTGTTTACATAACATCAACACTAATATCAACACCCCCCCTCAAGTTGGAGGTGTAGCAAGCAGATCCAACTTGCTTAAGATTGCTGAATGCTTCACTCCAGTGAGTGCTTTGGTTAGAATGTCAGCAAATTGTTCACCAGTTCCAATATGATGCAATGAGATTAGTCCTTCTTGAAGCTTAGCTCTCACAAAATGGCAATCGACTTCAATATGCTTAGTTCTTTCATGGAATACAGGATTCTTGGCAATTTGTAATGCTGATTGGCTATCACAGAAAACAGGAAAAGGACTAGCACATGGCACAGTTAGCTCTTCAAACAATCTGCTTAACCATAGCAATTCCCCTACTACTTTCCTAATAGACCTATATTCAGCTTCAGCTGAAGATAGAGATATAGTTTCTTGTTTCTTCGATTTCTAGCTGACAGGACTTGATCCCAACAACACAATATAACCAGTAACAGACTTCCTTGAGTCAGGACAGGATGCCCAGTCTGAGTCACAAAAGGCTTGGACCTGGTAATCATTAGTAGAAGACATGAGTAAACCCAAGGTTGGATCCTTTTTAAGGTACCTAAGTAGATGATATGCAGCCTGCAAAAGAGGTTCTCTAGGCTCTTGCATAAACTGACTCAGATGTTGTACTCCATATGCAATATCTAATCTTGTATTGGTGAGAAAATTTAACTTTCCAATCAACTTTCTATATGACTTAGGATTCTCCAAAAGTTTCCCTTCATTGGCTTTGAGCTTGATGGTAGAATCAAGAGGAGAAGCAAGACTAGAGTATGTAGTGCAGTTATACTCTTTGAGAAGATCAAGCACAAATTTTCTCTGGGAGATAAGCATTCCAGCTTCTGTATATAGTATTTCCAGGCCCAAAAAATAGTGCAGCTTTCCCAAATCCTTGATTTTGAATTGGTTATGAAGATAGTTCTTTAACTGATCAATTTCTTCAGCATCATTTGCAGTAAGTAGAATATCATCTACATATACAGCTATAAACACAGTAGAAGAACCTTGTTTTCTATAGAACAAAAAGTAGTCATTCAAGGAGTTGTTGTATCCCCTAGACTTTAAGGCATCAGACAACTTAGCACACCATTGTCTGCTGGCCTGTTTTAATCCATATAGGGACTTGTTAAGCTTACAAACCATGCCTTTAGTTGTAACATCCAATCCCTGTGGAATATCCATATATACTTCTTCATGCAGCTCTCCATGAAGAAAAGCATTATTAACATCTAACTGGTATATATTCCAGTGCTTCTTTACTGCAGTGGCTATCAAAACTCTCACAGTTGTCATTTTGATGACTGGAGAGAAAGTTTCTATATAATCTACTCCATAATGCTGAGTGTAACCCTTTACAACTAGCCTTGCTTTGTACCTTTCTATACTCCCATCAGCCTTATGTTTTACCTTGTAAACTCATCTACATCCAATAGCCTTTTTACCAGTAGGAAGTGGCATAAGTTCCCAAGTATCATTGTCATGTAATGCAGTCAATTCTTGTGTCATTGCATCTTGCCAGGCAGGATTCATTGCAGCCTCATTAAATGATGATGGTTCACAATCATGTGACACACTCAATATAAGTGATTGATTGTCAGGATACAAGGATGTAGAAGCTATATGATGGTGATGTGAAAAAGAGGCATGTAAAGAGGTCATATAGTCTTTAAGGTAAACTGGAGGTTTATGAGTTCTAGTAGATTTTCTGATGGGAGGATCATATTCTGAGGATGTGAGGTTTGGTGAAGGAGAAGTAGTTAAAATGGGATCACATTGTTCAGGTTCTGGAGAGGTGATACCAATATTATCATTGTCAAAAAAACGTTATCAAATGTAGAACTTGAAGAAGAATTGTTGATAGGAGAATTGATCATACTAGAAAAAGGAAAAACTGTTTCATGGAACACAACATCTCTAGAAATATGTATCTTCTTACTGCTCAAACTTAACACCTTATAACCTTTAACTCCAAAAGGATATCCTAGGAATACATGAGGTGTAGCTCTAGGTTCAAATTTAGTTCTTTGATGTTTAGGTGTAGTAGGAAAACAAAGACAGCCAAAACTTTTCATGTGAGAGTATTGAGGTTCTTGATTATACATTATGGAATAAGGACACTTATTGTGAAGATATGCAGAAGGGAGTCTATTAATTATATATGTGGCTGTAAGTATGCATTCTCCCCAATACTTAGTAGGTAACTTGGAATGGAAAAGAAGAGCTCTAGCTGTTTCTAGTAGATATTTATGCTTTCTCTCTACCACACCATTTTGTTGTGGTGTATAAGGACAAGATTTCTGATGTAATATTCCTTTGGATTGAAAATAAAGGATAGATTCTTGATTCACAAACTCAAGACCATTATCTGATCTTATTTTTTGAATATTTGTCTTAAACTGATTTTCTACCATATTAACAAAGGATTTCACAATGTGTAAAGCATTGCTTTTACAACTCAACAAGTGTGTCCAAGTAGTTCTACTAAAGTCATCAACTAAGGTAATGAAGTATTTAAAATTGTCATGAGTGGGTAAATGATAAGGACCCCATAGGTCTATATGCAGAAGTTCAAAAATTCTTGATGTATTATGAGTCTTAGGTGGAAAAGAAAGCCTAGTTTGTCTGGCCATAGGGCAAATATTGCATGTAAAAGGTTGTTTAGATGAAAAAATCACAGGAATGGATGTAATCCCTTTCATCTTTATAAAAGGCACATGCCTAAGTCTGTAATGCCATAACAAATCATTACAAGAATCATGAGATAAAAGAGGTACAGAATCAGAAAGTACATTATTAGTGTCACTAGGAATTGTGTTCATTACAGTTGATCTAACATTCTGAAAATTGAACAAAGGATTGCAAGAATGATTGATGGTACTACAAGAATGAGAGAAGCATTGACATTGAGAGCCTATCTTATTGTTGTGAGAAGAACAAGACATTGAAGATGAGACTTGTGAAATGAATGGACTGTCTTTTTTCTTTTTTAAACAATCTGAGCAAAGAAAGTATAATCCATCTTGTTCTCTACCAATCTCCAGAGGCCTCTTCATTGAAGGGCCCTGCAAGGTACAAGATGAGTTAGAGAATGATGTAGTACAATTGAGATGTAGAGACAAGGAACTAATAGAAATCAAATTGTATTTAAAAGAAGGGATAAAAAGAACTCTGAACGGTGTGATCATGTCATTTATTCTAACATCTCCAACTTTAGTCACCTTAACTTTGTATCCATTTGGCAATTTAACTAACATAGGATATGGTAAGTTAGTGACATGTGAAAGATGGTTGATATTAAAGGTCATATGATGTGTAGCTCCTGAATCCAGTATCCATAAATCAGTCCTTGATTTGAGACAACCACACGACAGCTTATCAAAATCAATAGATGAGTTGCAAGCTATCATACCTGCAAAGTTTGCAGCTCCACAAGTTACTTGTTCCTCAGAATCAACATCTTCAGGTTGTCCTAATTGAATGTGTTGCAACAGATTAATAAGTTGATCATATTGTTCATTGGTGAGATTAGCACTACAGGCTGTATGAGCATCAACTTTTCCATTTGGTGATTCTGCAAAAACATTAGCTACCACCATTCTTTTACCTCTAGCATACCTACTGCTTGTATTGTAATTGGTTTGTACCCTTTGATTTTGATTAACACCTTGACCATTAGATGAGTTATTTTGATTGGGATAGCCATGTAACTTGTAACATTTATCAATAATATGCCCTGATCTCTTGCAATGCTCACAAAAAGGTCTAGGCTTATTGTTTGCAGGATAATTGCTTGGTGCATAATTTGTTCTAAATCTTCCTCCTGTCGAGTTTGATGAACTAGCATTGGCAGAACTTGATGGATTAGATGAACCACCACGTATGGATGAATTCATTGAACTTCCTTCAGCAAACATTTGACTATGTGGCTTAAATTCCCTTTGTTTCTCTTCTTGTACAAGTAATGCAAAGGCTTGAGCCATAGATGGTAGTGGATTCATCATCAGAATATTACCTCTAATAACAGTATAGACTTCATTAAGCCCCATTAAAAATTGAATCAATCTTCGATCTTGTTCAGCCTTGTGCATAATTTCTTTACCTCCACAGCTACAGGCACAACTACACTGGTTTTTGATACTCAGATTACTCAACTCCTCCCAGAGCTTCTTCATCCTAGTGTAGTATACAGTAACATCAAGAACTCCCTGACTCAGATCATTGATATCCCTTTGAATTTGAAACAATTTGGCACCATTCGTTTGATCATATCGATCTTCTAACTCTTTCCATAGTTCTACTGCATCAGACACATACTCTACACTGTCTGCAATGTCTTTGCTAAGAGAGTTTAGGATCCAAGATATTACCATGTTATCACATCTCTCCCACTGACAATATTGTGGAGATGTTGAAGAAGGGCGTTTGAACTCTCCAGTAATGAATCCTAACTTGTTTTTCACAGATAAAGATCTCATTACGCCTCGTCGCCATGATCGATAACCAATTCCTTCAAAAGCTACTGGAACTAGGGTCAAACTTGGATTATCAGATGTATGTATGTAGAGAGGGTTACTAATATCGATTGTGTTCCCTCCTGTTCCTCCTGTTCCTGATATGGAAGCTTGGCCAGAAACTTCAACCATAATGAATTCAATTCACAGGAACCAAATAATAGAATGCTGAAGAAAATCAACAAGAAGAAGGATTTCGACCTTCAGATGAGTGCAGAAATTGACAAGAAGATGAATTCGATTTCTTCGACCTTCAGATGAGTGCAGAAATTGACAAGAAGATGAATTTCGATTTTTCAGAGATGATAAGAACAGTGATCTACACCTGCTTTGATACCATGTTAAACAAAAGAACAGCACATGCTTAGAGGATCTCCATTGAAGGAGATTAAGGAAGAAGAGAAGAAGAAGCGAGAAAGAAGAGATAGAACTCAACTCTTCTGTGATCTGAATTGATAAGAGTTGTGGAAAACACAATACAAAGAAGAAGATTACAATGAATTTGTAGCAGCCATTTATATAGCTAACTAACAGAGTATTAACAACTAACCAACTTCTGACTAACTAATGGAAGCTAATAACTAACTAATGGAAATATAACTAACTAATTGAAAAGCTGTAACTAATAACTAACTAGTTGTTTACATAACATCAACACTAATATCAACAGTTACAATAAATGTTGTGCAGGGTGGAATGGTATAGTTGCTCAGCGACACTATGGGAACCAACAAGTGAATCAAGCTCCTCAAGTACAATCCATGTCAATGTAAAAATTCAAGATTGTGATTCTTTATTTGTTTGATTTGAGGTTGTGGTGTGTTAGTAAAAACCAGATTCTGTTCATGTTTGAAGTTGTATCCTTAAAACTCAACCATATTGTTGGCTGTGTTAGTTGTTTGAACTATGTTTTTACAACCCCAATTCGAGTTAGATTATAAACAATGCC</genome_strand>
        <mrna_strand>ATACTATTTGGATAACAATGGGAAGAGTTGAAGCAAACAATGAAGGAGAAACATCTCAGGCAGAGAGTGGTACTGAACCAGCTGCCTCACAGCCTCAACAGTTCCAAGGAGTACAAAGTGTGTATCAGTCACCATCACACTTAACAATTGGAGCTCCTTGGAGTACTGGCTTATTTGATTGTCATCTGGACCAAACTAATG............................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTCATGACGGCGTTCTTACCTTGTGTAACATTTGGACAAATAGCAGAAGTCCTTGATGCAGGACAAATGA..............................................................................................................CATGCCCTTTGGGGACTTTCATATACATGCTGATGATGCCTGCTGTCTGCTCTCAGTGGATCATGGGCTCAAAATATAGAACCCAATTGAGACAAAGATATAATCTAGTGGAAGCTCCTTATTCAGACATGATTTCCCATATGTTCTGTCCATGTTGCTCTCTTTGTCAAGAATTCAGAGAGCTTCGAAACAGGGGACTTGATCCCGCTCTAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGAATGGTATAGTTGCTCAGCGACACTATGGGAACCAACAAGTGAATCAAGCTCCTCAAGTACAATCCATGTCAATGTAAAAATTCAAGATTGTGATTCTTTATTTGTTTGATTTGAGGTTGTGGTGTGTTAGTAAAAACCAGATTCTGTTCATGTTTGAAGTTGTATCCTTAAAACTCAACCATATTGTTGGCTGTGTTAGTTGTTTGAACTATGTTTTTACAACCCCAATTCGAGTTAGATTATAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C00HBa0081D06-3cnAc/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U346360" ref_strand="-" ref_description="SGN-U346360        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: | Symbol: None | ethylene-responsive family protein, contains similarity to ethylene-inducible ER33 protein (Lycopersicon esculentum) gi:5669656:gb:AAD46413 | chr4:14341006-14344609 FORWARD | Aliases: F19B15.130, F19B15_130(evalue: 1e-31, score=133) genbank/nr: gi|15233452|ref|NP_194639.1| bHLH068 putative bHLH transcription factor [Arabidopsis thaliana] gi|7485742|pir||T08965 hypothetical protein F19B15.130 - Arabidopsis thaliana gi|4972056|emb|CAB43924.1| putative protein [Arabidopsis thaliana] gi|7269808|emb|CAB79668.1| putative protein [Arabidopsis thaliana] gi|19698939|gb|AAL91205.1| putative protein [Arabidopsis thaliana] gi|22711852|gb|AAM10966.2| putative bHLH transcription factor [Arabidopsis thaliana] gi|23197826|gb|AAN15440.1| putative protein [Arabidopsis thaliana](evalue: 9e-30, score=133)">
      <seq>tggaaagactgatacagcctccgtcctatcagaagctattggctacatcagattccttcaggctcaaattcaggcattaagctcaccatacttgggcaatgcatcaggaagcatgggtcacattccccaacaatcactgaatgattctcagcacaaaccgatggatttaaggagtagagggttgtgcttggttcctatttcttgcatggcaaatataggaagtgataccggcgccgattattgggctccagctctcggaggaggattttgatgttacgagctgattggattttaagttatatacactgacagtgtaaaaatactgagacgacaacaaactgatgataagacgtatcggagcctctgtgtcctcatggaatgaatgatataacatcacaaagcagtcattctcagtatgaaagtcagagctgactgtttgtgatgctattttgcatttgaaatcgggtcaatgataaagtggtattttccaatgtacaatatggtcctattttcttgaatttcatgaataatcttactaccttacaaggtagttcataactgttgtatatgtaacttggaaatccataggtacaatcaacatatcgtttcgaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C00HBa0081D06-3cnAc/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C00HBa0081D06.1" temp_strand="-" temp_description="C00HBa0081D06.1  AC218144.2 htgs_phase:3 submitted_to_sgn_as:C12HBa0081D06">
        <position start="103122" stop="100433"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="102820" g_stop="102755" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="8" r_stop="73" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="102754" i_stop="102261" i_length="494">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="102260" g_stop="102192" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="74" r_stop="142" r_length="69" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="102191" i_stop="101205" i_length="987">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.937" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="101204" g_stop="100727" g_length="478"/>
          <reference_exon_boundary r_type="cDNA" r_start="143" r_stop="620" r_length="478" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C00HBa0081D06.1" gen_strand="-" ref_id="SGN-U346360" ref_strand="-">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>613</cumulative_length_of_scored_exons>
        <coverage percentage="0.989" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C00HBa0081D06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U346360" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="102820" e_stop="102755"/>
          <exon e_start="102260" e_stop="102192"/>
          <exon e_start="101204" e_stop="100727"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACTGATACAGCCTCCGTCCTATCAGAAGCTATTGGCTACATCAGATTCCTTCAGGCTCAAATTCAGGTCTTCCTTTTTTTTTTTTTCATTCATAAGCATGCTGCAAATATATTCATTGATTTTGACATGTTGCATTATACGTATATTCTCCGTTTCAAATAGAATGATTCACGGTGTCTTTTAGTCTGTCTAAAAATGGTATGATATGATCATTTGCACTTGACTGTTTAAACTCATAAGATTAAGCGATATTTTGTTACATTTAACATAACATTAATTTAACATCATAATTAAGAGTAAAAAAATCCTTATTTTCTTAACCTATATGTCAAGTCAAAATAGATTATTCTATTCGAAATGAAGAAATATTATTATTCACCTTATTATCTTTTAGATTATTTTATCTTACTTATTACGAATCGATCGTCCTATATATATATGTTACTAACTAATTATAAATATGTGAAAAATGTTATATATTACTATGAACATATATATATCCATTGATATTATACATGAATTTTTATCAAATTTTTTTTTTGGTGCACGTATATATGCAGGCATTAAGCTCACCATACTTGGGCAATGCATCAGGAAGCATGGGTCACATTCCCCAACAATCACTGAATGTAAGAAATTTATTCTTTACACATTTTCCAATGCACGACCAAGATTCCTCATCAGTTTCTCATATTTATACACGTGCGACTGACTAATCATATCTGATTAATTCGTTAATTATCAAGATTAATCTTTTAACTTTTCTTGAATTCAAGAAAATTAAGTATTATTATTATTATTATTTACTTGATATACAAATGCCTACTTTATTGGATCCCTCACTAGTACACCAAAAGCTAGTTATGTGAGGCTTTACATTTGTAAAGCAACAGTCATATATATCAAAGTGTTCTGTTCATAAAAAGTGACCGCCCTAAAGGTGAAATGATCTTCTCAACAATAATTGCACTTCTTCAACTGAGTTTGGTAAAAACAAACTCTAATGATCTATTTTACATTGCGTAGTTTGACTGAGCATAAAATTTAAGAATATAAAAAATACGTCTAATTTATGTGTTCTTTAATTAATTAAAGTGTAGTAACATACAAAATGTAGCCTTTTAAGTAGTGGTTTAAATATGATTTCATGCCTATAAGGGAGTGTTAATGGAAATTTTATCACCAAAAGTTTACATAATATAGAAATATGACGTTCTTTTTTAAAACATACTAGAAGAGAGAAACGGATGGAGTAGCTTAGTCAAGAAAGGGGCTAAAATTTTGAATTTGGATCCATTATAACTTTCTTGTCCTTAGATACTAATTTGAATTCTAATTCCTTTTCATCTAGTTTTTGGATGGTAATTTTCTGAAAAGGAGACCAGCAAATAAGCAGGTACGGTATAATTCTATTCAATACATGTACATGCATGCCCCATTACTAGTGTGGCAATTAACAAATATGTTAAGTTTTACATTATCGTCAAATAATTTAACATGTTATAGCAGGTTACTTATTATTTGTTGTATGATGTTACTAATCAATGCTACATACTAAATTGAGTTGCCTCTAATTATCTTTTAATCGAGCTGATTTTAGTTTTCATTCTCTTTAGGATTCTCAGCACAAACCGATGGATTTAAGGAGTAGAGGGTTGTGCTTGGTTCCTATTTCTTGCATGGCAAATATAGGAAGTGATACCGGCGCCGATTATTGGGCTCCAGCTCTCGGAGGAGGATTTTGATGTTACGAGCTGATTGGATTTTAAGTTATATACACTGACAGTGTAAAAATACTGAGACGACAACAAACTGATGATAAGACGTATCGGAGCCTCTGTGTCCTCATGGAATGAATGATATAACATCACAAAGCAGTCATTCTCAGTATGAAAGTCAGAGCTGACTGTTTGTGATGCTATTTTGCATTTGAAATCGGGTCAATGATAAAGTGGTATTTTCCAATGTACAATATGGTCCTATTTTCTTGAATTTCATGAATAATCTTACTACCTTACAAGGTAGTTCATAACTGTTGTATATGTAACTTGGAAATCCATAGGTACAATCAACATATCGTTTCGAAAATTTTAT</genome_strand>
        <mrna_strand>ACTGATACAGCCTCCGTCCTATCAGAAGCTATTGGCTACATCAGATTCCTTCAGGCTCAAATTCAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATTAAGCTCACCATACTTGGGCAATGCATCAGGAAGCATGGGTCACATTCCCCAACAATCACTGAAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTCTCAGCACAAACCGATGGATTTAAGGAGTAGAGGGTTGTGCTTGGTTCCTATTTCTTGCATGGCAAATATAGGAAGTGATACCGGCGCCGATTATTGGGCTCCAGCTCTCGGAGGAGGATTTTGATGTTACGAGCTGATTGGATTTTAAGTTATATACACTGACAGTGTAAAAATACTGAGACGACAACAAACTGATGATAAGACGTATCGGAGCCTCTGTGTCCTCATGGAATGAATGATATAACATCACAAAGCAGTCATTCTCAGTATGAAAGTCAGAGCTGACTGTTTGTGATGCTATTTTGCATTTGAAATCGGGTCAATGATAAAGTGGTATTTTCCAATGTACAATATGGTCCTATTTTCTTGAATTTCATGAATAATCTTACTACCTTACAAGGTAGTTCATAACTGTTGTATATGTAACTTGGAAATCCATAGGTACAATCAACATATCGTTTCGAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C00HBa0081D06-3cnAc/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U341033" ref_strand="+" ref_description="SGN-U341033        Tomato 200607 #1 [1 ESTs aligned] genbank/nr: hypothetical(evalue: 4e-32, score=21.9)">
      <seq>agagatacaggagaagaaagattgcaaaatttgtgttgagagaagagggtgaagaataatcattagtcgagtagcaaatgatggctggaaaccctactaattggtggagcatgatcatgaatggaaacatgcatccacaattatctcatgatcatgatcaacataattcttcttcttctaattctaattctaattcttcacatttttatggagctcataatccaaatcaagattttcctcgttcattgagccaacttcttatgaatggattttgtggtgatgaagaaaagtttggtattagtccttttcatgccgccgggaattcggaagaccaaagtttgaattccgtccatccaacatcatcaacagctaattttagggttcctgttgctgatgtaaagccagaattgtatcatcatcatcatggccacaacgaatttcaaacatcttcatcgctacaagaaaaactcgaattagatactgatcattttaccaggcctttaattgcttctaattg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C00HBa0081D06-3cnAc/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C00HBa0081D06.1" temp_strand="-" temp_description="C00HBa0081D06.1  AC218144.2 htgs_phase:3 submitted_to_sgn_as:C12HBa0081D06">
        <position start="105507" stop="104021"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="105207" g_stop="104946" g_length="262"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="262" r_length="262" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="104945" i_stop="104576" i_length="370">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.983" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="104575" g_stop="104321" g_length="255"/>
          <reference_exon_boundary r_type="cDNA" r_start="263" r_stop="517" r_length="255" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C00HBa0081D06.1" gen_strand="-" ref_id="SGN-U341033" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>517</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C00HBa0081D06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U341033" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="105207" e_stop="104946"/>
          <exon e_start="104575" e_stop="104321"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAGATACAGGAGAAGAAAGATTGCAAAATTTGTGTTGAGAGAAGAGGGTGAAGAATAATCATTAGTCGAGTAGCAAATGATGGCTGGAAACCCTACTAATTGGTGGAGCATGATCATGAATGGAAACATGCATCCACAATTATCTCATGATCATGATCAACATAATTCTTCTTCTTCTAATTCTAATTCTAATTCTTCACATTTTTATGGAGCTCATAATCCAAATCAAGATTTTCCTCGTTCATTGAGCCAACTTCTTATGTAAATATACAAAACCTTACCCTCTTTCTCTCTCTTTAATTTATTCGTCATGTTTAATCACCTAGCTTGGTTCTAAAGATAATTCAGAATTCGAACTTTATTATATACACATATTATAGGGTATGTAGCTCCTTACCTAGAAAATTTTGATAACTTTCCCTTTGGTTTGAGCTAATAATTGTCATCTTCTTGCTATGAGAAAAAGAAGGATACAAGATCTAGATTAATTAGTGTGATTTTACCAAAGATATATATATATATATTTGATTTGTTTTTTTACTTTTACATAATAGTTCGAGCAGAAAGTAATAAGTTCAATCAGATTTGTATTTTTTTTTCCTTTGTAATTCTCAAATATGTTACTCTACAGGAATGGATTTTGTGGTGATGAAGAAAAGTTTGGTATTAGTCCTTTTCATGCCGCCGGGAATTCGGAAGACCAAAGTTTGAATTCCGTCCATCCAACATCATCAACAGCTAATTTTAGGGTTCCTGTTGCTGATGTAAAGCCAGAATTGTATCATCATCATCATGGCCACAACGAATTTCAAACATCTTCATCGCTACAAGAAAAACTCGAATTAGATACTGATCATTTTACCAGGCCTTTAATTGCTTCTAATTG</genome_strand>
        <mrna_strand>AGAGATACAGGAGAAGAAAGATTGCAAAATTTGTGTTGAGAGAAGAGGGTGAAGAATAATCATTAGTCGAGTAGCAAATGATGGCTGGAAACCCTACTAATTGGTGGAGCATGATCATGAATGGAAACATGCATCCACAATTATCTCATGATCATGATCAACATAATTCTTCTTCTTCTAATTCTAATTCTAATTCTTCACATTTTTATGGAGCTCATAATCCAAATCAAGATTTTCCTCGTTCATTGAGCCAACTTCTTAT..................................................................................................................................................................................................................................................................................................................................................................................GAATGGATTTTGTGGTGATGAAGAAAAGTTTGGTATTAGTCCTTTTCATGCCGCCGGGAATTCGGAAGACCAAAGTTTGAATTCCGTCCATCCAACATCATCAACAGCTAATTTTAGGGTTCCTGTTGCTGATGTAAAGCCAGAATTGTATCATCATCATCATGGCCACAACGAATTTCAAACATCTTCATCGCTACAAGAAAAACTCGAATTAGATACTGATCATTTTACCAGGCCTTTAATTGCTTCTAATTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C00HBa0081D06-3cnAc/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U318362" ref_strand="+" ref_description="SGN-U318362        Tomato 200607 #1 [16 ESTs aligned] arabidopsis/peptide: | Symbol: None | Pex2/Pex12 N-terminal domain-containing protein / zinc finger (C3HC4-type RING finger) family protein, contains Pfam profiles PF00097: zinc finger C3HC4 type (RING finger), PF04757: Pex2/Pex12 amino terminal region | chr1:30024637-30027655 FORWARD | Aliases: F20B17.23, F20B17_23(evalue: 3e-128, score=455) genbank/nr: Zinc(evalue: 1e-135, score=486)">
      <seq>ttgtgtctcaaatttgtctgcgtggtcaagtcagtgctgaactgaaaagattgctcaccggggttccggtacgcaatcgccgccggcgaccaccaatttcttcatcgcatatcccactatagttaaaattcattgaattatctagtacggccgagatatggacagacaaaacctagcttcatcctccgctccccgtggtggtgcgactgtccatcctcccccacaacacgatgcttggatcaatacttaccggaatttgcatcctcaatggcaatctcttcttcctccaccgcaacagtcagccattccaatatcaatatccagagttaatcaggtagatgctggaagactggacattgaaatgtcagccatgctaaaagagcagttggttaaggtcttttctttgatgaagccaggaatgttatttcaatatgaaccagaacttgatgcttttcttgagtttctaatctggcgattttctatctgggttgataagcctactcctggtaatgctctcatgaatctgagatacagagatgaacgtgcaagtgagattagaggaaaagtgaggactggattagagggaccaggacttactgttgctcaaaagatatggtactgtgttgcaacagttggtggtcaatatatatgggctcgtctacaatcattttctgcttttcggagatggggtgactctgagcagaggtccttggcacgtggagtgtggttgttaatgcaacggatggagggtatctataaagcagcatcttttagcaatttacttctctttctttacacaggaaggttcaggaatctcattgaaagagctttaagagctagacttgtttatgggagcccaaatatgaacagagctgtgagctttgagtacatgaatcgtcagttggtctggaatgaattctcggaactgctgctcttgcttcttccccttctcaattcagcatctgtcaagagtttccttcgtccattctcaaaggacaaatcttcagattcttcagtagatgaaactttatgccccatctgccagggaaccccatcaattccatttgtagctatcccttgtcagcataggtactgttactactgtcttcaaacaaggtgctctgcatcttcatcgtttcgttgccccagatgtggtgaaccagttgctgctatgcaacggcatggtggtttagtcagcaacattcctcagaaacaatgattgttctgcaaagtgattgaaatgataaaaaaaagggaagctaagttaaactatagatcaaaagttgctcaaaagacaacttgacaatgaaactaggtatctagattccttaataaagcttattgttctgctttattgagtgctttaattttttaatagtgtggttgtcccttttcctgtattttacatctcatttgtttatttaattgaaagataattttctcaaaaaaaaaaaaaaaggaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C00HBa0081D06-3cnAc/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C00HBa0081D06.1" temp_strand="-" temp_description="C00HBa0081D06.1  AC218144.2 htgs_phase:3 submitted_to_sgn_as:C12HBa0081D06">
        <position start="115670" stop="9199"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="115370" g_stop="115073" g_length="298"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="298" r_length="298" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="115072" i_stop="114272" i_length="801">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.968" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="114271" g_stop="114158" g_length="114"/>
          <reference_exon_boundary r_type="cDNA" r_start="299" r_stop="412" r_length="114" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="114157" i_stop="114052" i_length="106">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.964" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="114051" g_stop="113898" g_length="154"/>
          <reference_exon_boundary r_type="cDNA" r_start="413" r_stop="566" r_length="154" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="113897" i_stop="113053" i_length="845">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="113052" g_stop="112916" g_length="137"/>
          <reference_exon_boundary r_type="cDNA" r_start="567" r_stop="703" r_length="137" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="112915" i_stop="111135" i_length="1781">
            <donor d_prob="0.963" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="111134" g_stop="111034" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="704" r_stop="804" r_length="101" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="111033" i_stop="110235" i_length="799">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="110234" g_stop="110117" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="805" r_stop="922" r_length="118" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="110116" i_stop="109846" i_length="271">
            <donor d_prob="0.230" d_score="1.00"/>
            <acceptor a_prob="0.857" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="109845" g_stop="109679" g_length="167"/>
          <reference_exon_boundary r_type="cDNA" r_start="923" r_stop="1089" r_length="167" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="109678" i_stop="109125" i_length="554">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.967" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="109124" g_stop="108769" g_length="356"/>
          <reference_exon_boundary r_type="cDNA" r_start="1090" r_stop="1445" r_length="356" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="108768" i_stop="108441" i_length="328">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.361" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="108440" g_stop="108423" g_length="18"/>
          <reference_exon_boundary r_type="cDNA" r_start="1446" r_stop="1463" r_length="18" r_score="0.722"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C00HBa0081D06.1" gen_strand="-" ref_id="SGN-U318362" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>1463</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C00HBa0081D06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U318362" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="115370" e_stop="115073"/>
          <exon e_start="114271" e_stop="114158"/>
          <exon e_start="114051" e_stop="113898"/>
          <exon e_start="113052" e_stop="112916"/>
          <exon e_start="111134" e_stop="111034"/>
          <exon e_start="110234" e_stop="110117"/>
          <exon e_start="109845" e_stop="109679"/>
          <exon e_start="109124" e_stop="108769"/>
          <exon e_start="108440" e_stop="108423"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGTGTCTCAAATTTGTCTGCGTGGTCAAGTCAGTGCTGAACTGAAAAGATTGCTCACCGGGGTTCCGGTACGCAATCGCCGCCGGCGACCACCAATTTCTTCATCGCATATCCCACTATAGTTAAAATTCATTGAATTATCTAGTACGGCCGAGATATGGACAGACAAAACCTAGCTTCATCCTCCGCTCCCCGTGGTGGTGCGACTGTCCATCCTCCCCCACAACACGATGCTTGGATCAATACTTACCGGAATTTGCATCCTCAATGGCAATCTCTTCTTCCTCCACCGCAACAGGTACTCTCTCCGCCCATTCATTTTATGCCTCAATTTTTTATTATGACACTTGAGATAACTGATTTCCAGTTAGGGCAGAGACTTTTTGAAATATATATTTATTTTGGTATCCGCACCTGCTCAATTAAACTTGTGGACTTCGAGAAATTTCCATTTGTCTCCCATATCTGTTCCATTTTATTATGTATATTTGTTCTTTACTACAGTATTTCCCACAAAAACACTGTCTTTCTTATTGGACTTACTCCGAAGAAGCATTATAAGTCATTGTTTCAGTTTTGATGATAATAGGCTGTGGTTTGTCTGTCTATTTAGTTATGGAAACTTTGATGGAGCTTAGAACATTCATAGAAAAAGTTCTGATACGGACATTTGCACATCTACGTTTTTTTTTATTGGGGGTAGGATACTAGAAAAATGGATTTAGTTCCCCTAGTCAGGACCAGATTAGCTTAAATTTTCTTCAAGTTTTATGCAACCTGGGATGATGTTAATGGAAATACAAGACGTGGAGCTTCATTGTGATAAAGATCAGAAATACAAGAAAGGAAAGAAAAGACTAGCCGTTCTCTGGAAATTGTTGATGGTTTTAGTGTGTTATCCCATGGGAATTTACTTATTTCTTCATTGTAACACACAAAAGCTGTTTTCTTTCCTTTTCTGTTGTAAAGTTCTTAAATGTAGATCTTTTTACTGTTGGGGCTCAGAGAAGGATGAGTAAGGAGTTCCGTTTTGAGGTTTTATTTGCTGATTTTTTTGCTTCCACCACTGAAATTTCATGTTGATAACTTCTTTTGGCAGTCAGCCATTCCAATATCAATATCCAGAGTTAATCAGGTAGATGCTGGAAGACTGGACATTGAAATGTCAGCCATGCTAAAAGAGCAGTTGGTTAAGGTCTTTTCTTTGATGAAGGTACCTATCGTGTAACTTTTTGTTCTATCATCAAATTCATCAAGTCTTCAGTGATTCTGTTATCTAACAGAAGTTTTGATATCTGTTTTTTTTTTTTTGGGATTAGCCAGGAATGTTATTTCAATATGAACCAGAACTTGATGCTTTTCTTGAGTTTCTAATCTGGCGATTTTCTATCTGGGTTGATAAGCCTACTCCTGGTAATGCTCTCATGAATCTGAGATACAGAGATGAACGTGCAAGTGAGATTAGAGGAAAAGGTTAGAAAAACATCATTGCTTAATCTTGTTGCTCCTTTTCTGTAAGTAGCTTGTATCAACCTTTTTTGTATCTCAGTGATGTTAGAAATTAAATTTGTTATATTGTGTTGCAAGCTATGCATCGATGAGATGGTTCTAGATTCTACTTTAGGGATTAATTTTAGACTTGCTATAGAATTTGAAACTTCACAGTCTCTAGTAGCTCAGCTGATCTATTAATAATTAAAAAGATTAAGACCAAAGTATCTAGAAACGCAAAAGATAAAGATAAAAAGGATTATAAAACAGTAATTCGAGATTAGTTGCCAACTACTTTCAGAAAAACAATGTATTGGAGCAGACAAAGGAAGATCATCAAAAATATGTCAATGTGAGGAGGTGACTTATTTGCCCAAAAAATGGCTTACTAAAGAAAGCATAAGAAGAACGAGTACAAAGTACAACCATCTTCTTCAGTTTGTAATGGAGGGACCATTGGAATTGACTTGTAAAATCTCTTTGGTCTTACTTTGTGTTTGTGTTTGAAATGAAGAGGTTGGCAGCTTGATTTAATTATTTTTGATATGGTAAAAATGTTTAAGGTTGGCAGCTTGATGTAATCACATTTCTTGTTTCTTGCATTAACTGCAATAATTTCAGTTGTAGTCTTATAGTTTGTTAAGTCTAAATTAGCAAGGGTGTATAATCAATCTGATTTGGAAGGATTGTCTTGGAAAATCTCCTTTGTCTTACTTTGTGTTTGAAGTGCTAAGGTTGACAGCTTGATGCAGTTTCATTTTTTCTTTCTTGCATCAACTGCTATAATTTCAGTTGTAGTTCTGTTTCCTTTTCCATGTTTTTTATAGTGAGGACTGGATTAGAGGGACCAGGACTTACTGTTGCTCAAAAGATATGGTACTGTGTTGCAACAGTTGGTGGTCAATATATATGGGCTCGTCTACAATCATTTTCTGCTTTTCGGAGATGGGGTGACTCTGAGCAGGTACTGCTCTCTCTGCCTCACATATTCGACACGTTTGCGTGCATGCCTGTTTTACTGGTGACAAATATGTTTATCACTAAGAGAACTCTTCGTTCTCTAATAGATAATACTCTTCAGTTTTGTTGACTTCAATTGTTAGAAATAATTAGTTATTAAGTCCTCCAATATTCTGACTTTGTGTAACAACTTTTAACCTTGAAAAGGAACCCCTCGATTTTTATTTTGTTTTGGCTTAGGCATATGAAATGTTAAGAAGGAAAATTTTTATATGCTTTGGAACTTCAAAATGTGCAACTTCAATGTAGGATCAGTAAAAACATCTATCACTGAAAAGCCTTGATCATTGGTATGAGTAGAATATTGACAAACAACAAGGATGTTGCCATGGACCATGAGAAACTAGTAGCCAAATTTTAGCTCAAAATCAATTTAGGTGATTTCTTCATGCATATCTTAACTTTGATAGATGTAGTTACCCGATGCATATGCTGTCAGGAGGTAGTATGCGCCGAAGGAGTAGTTGAGCTGCGTGCAAGTTAGTCCGCATACCACCATTATTATAAATACGGTGTAGAGTATTAACAAAATTGTGTCATCTAGGATCTTTTAGTCTGAAGATCATAAATAACATTGTAGTCAAGAACAATGAGATTCTTATGGTAACAACATGTCCAACAAAACTTTGTTATGTCATGGAATCTCCACAGCAGGCAATATTCTACATATAGAAAAGAAGTAGGAATTAGAAGTATTTCAGTTTGATTCTTTCCCCTGATCTTCATATAAATACAGATAGTATCAAAAATAAATAAAATTCAGATGAATAATAATTTTCCTTCAGCAGTATAATACTTACGGAACTTCTGAAAGCATTTTCTTGATAACTAGCAAAAATAAATGTTAATTTGAAATACTAGAGCAGAGCTTGTCTGTATTTAATAATCCAAATGACCAAATGTATTCTTGTGCCTTTTGTTTCAGCCTATCCAAATTTGTTTAATTTTCTCGAAAAGAAAATACTTGCATACGCTACATGAATACTTCTGCTGGAGAAGGGTATCATGTATATTCAATGTTATAGTGGTATTCTATCTAGCTGTTAGTTCTCTTTTATTGATTAACTAATCTTTTTGGCCATGTTATTACAATATGAGTAGCAATTGACCTTATCAAAACAAAATAGGAAAGAAGAGTTGAATTGATGGGGTCACATTTAGGGTCTACATGCTACTTTTAAGGTACCACGATTATTGAGGTAAACAATATATTCAGGGCCTAGATTATCAAGACGTGAGATAAACAATTCATTGATTAAATATTAGATTAGATGGGGAAATACGAAAGATCACAAGATATTTTCTCAAGTATGAAGAAATAGAAAAAAGTTAGTTCAAAAGTAAGGTGGACAATCAGGTTAAAATATGATGTCATGCAGCTTTCCTTTTTGACGTAATAGAAGAGGACAATTGGAATATGAAGTTGGGGAAATGTGAGATTGAGGAAGTATTGAAAATTCAATGTCATAGAAAAAGTACAAGTTTGTCCAAGTTTGGAAGCCATGTACATTTGCATAGTACAGTTTAAAGTCTTATGTTGATATCGCTGTTCAGTTGAACAGCTTTTGAAATAGGATTGGGTACTAACTTGTATAATACTGTTTCTTATAGTGTCAACTTGAAATCGTGTTAGTTTAATGAATAGTACTAACTTGTATAATACTGTTTCTTATAGTGTCAACAGATAAATTTATTCGTCACTTTTTAATTATGTATTTGCTTCAGAGGTCCTTGGCACGTGGAGTGTGGTTGTTAATGCAACGGATGGAGGGTATCTATAAAGCAGCATCTTTTAGCAATTTACTTCTCTTTCTTTACACAGGAAGGTATATCTCTTACTGCAAAGACTTTACTTTTTATTTCTTTTTCAATGCATAACATGACCACCGGATAAAAGAAGAAGATGACAGAAATCTAGTTCACAAAGTAGTTCTGTCAGTAATACTGCCTGAGTCTGTGCTGCCTGAATCTGTGCTGTAAGAACTAACAGACCGGTGCATGGGTATCAGAGGCACACATATGAGCTTGTATTGCTTTATGACAAATTTTCAATGGGAAAAGGTTAAAATAGGGAACTTTCTAAGTTTGAATCTGTGGAGAATGTTCTATTAAAGAGGTCATATCAGGATGAGTTGAAACTGACCAAGTTCTTATTGTTTCAAATGATATATTACAAACTTTTTGAGTTGGGAACCATCATTTCGTGGAAAAACACTTTTAGTCGAGGGGCATACGTTGAGAACTTGCAATAAAAGCCCCCATTTTTCTTCTGAAAAGCAAATGGCATCTAAGCTTCATTGTTTCTTTGTTTTTACTTGACTGTAGTGAGCTATGGCCACAATATCTGTCATCAATTTGTACATGCATCTCCATCCAATCAGACAGTGATTCCTCGTATGAGGGACTCAGGTCCCCAACTTAGTGCTGGAATCATGCGGCATGATAAACTTTTTGCACATTAGGATGGTTGATACTACTGATTCTTTAAAGATATATGGGAGCCCTAATATGCACAGTGCATCATTTGGTTGTAATAAATTTCCCTTGCATGTGATCTGGCCAATAAATTTAACACATTACAACTTCTTACATTAATGGTTTTCTACATGTATCAACTACATGCAGGTTCAGGAATCTCATTGAAAGAGCTTTAAGAGCTAGACTTGTTTATGGGAGCCCAAATATGAACAGAGCTGTGAGCTTTGAGTACATGAATCGTCAGTTGGTCTGGAATGAATTCTCGGTAATTGTCCTTCCATTGTCGTTATCTCACAATATGCCCGTCCAGAAAGTATTAAAAAAGACTCACTAAGAAATTTCTAGATAGTTTGAATCATTAACAATATAGAGTTTTACATATTCTTTTAGCTGTTTTACTGGATTGTAAATTTTTTTTGCTTTACAGTTCAAACTTTGCAGCTTCTGTTTCTGGCTTTACCTTGTTGACATGTTTGGTTTCTCAGTAGGCAAACAATGTGAAGGAGTTGGATTTTAAACAATTTTCTAATATGCAGGAACTGCTGCTCTTGCTTCTTCCCCTTCTCAATTCAGCATCTGTCAAGAGTTTCCTTCGTCCATTCTCAAAGGACAAATCTTCAGATTCTTCAGTAGATGAAACTTTATGCCCCATCTGCCAGGGAACCCCATCAATTCCATTTGTAGCTATCCCTTGTCAGCATAGGTATGTACATTTACATGCTTTCATTTATACAATAGAATGGTAATGCAGTATTCTCATATATGCTTATATGCCTTTATTAAGAACATACTTCGACGTTTCTTAACTGAAGAAATCCTTATCATAGAATAATGAGGATTTGTGGAAATTGCTGCTAGACAATCCTAGGTTAGTGTAGGCATTATTATTAATGCTCTTTCCAGGTGAAAATTGTTTGGACCGTTGTGTTGAGTATGGTTCTAATATTACTGTCGGCACAGAACATCAGAGTCAAAACTACTTTTACTTCAGGTTTACAACCAAAATAAGTTTTCATTACATTGTTTGTATCACCTCGTCTGCAACTTAAAGATGATTGAGTCCAGTTTCTACAAGCCAACCATGGTTCTCATATTAGGAGCTATTGAGCTTCTCGAAATCATATATATGCTTTCTTTCGTTGGTCTTTTGCCATGCTTTCTATTCGACAGTTTTCAATGTTCAGAATCATTTCTATCGTTAGTTTGCTTTGCATAAATGATTCTGAAATTTCAGGTGTTTGTATTTCAATGTTATAGGTACTGTTACTACTGTCTTCAAACAAGGTGCTCTGCATCTTCATCGTTTCGTTGCCCCAGATGTGGTGAACCAGTTGCTGCTATGCAACGGCATGGTGGTTTAGTCAGCAACATTCCTCAGAAACAATGATTGTTCTGCAAAGTGATTGAAATGATAAAAAAAAGGGAAGCTAAGTTAAACTATAGATCAAAAGTTGCTCAAAAGACAACTTGACAATGAAACTAGGTATCTAGATTCCTTAATAAAGCTTATTGTTCTGCTTTATTGAGTGCTTTAATTTTTTAATAGTGTGGTTGTCCCTTTTCCTGTATTTTACATCTCATTTGTTTATTTAATTGAAAGATAATTTTCTCAATTGTTGGATCAGTCTACACGCGATTGATTCAATTTTTGATGAAATGACTCTAAAAGTTCTACTTTTAACTTTGATTACGGCAACTTTTGAGAGGAAATCATAAACATAATTTTCATTTCCTTAAGGTTGTCAATTTGCAAATTAGCTAAGGTGAGAAAAAGTGTGTCAGTTAACTTTTGAAATGGGAAATAACAAGGACCTGAAAGATTGAAAACTTACACCCAAATGTATTAAAATACCCTTTTATCACGTGGTTTTAAACATATCACGTGGAAAATTAAAGATAAAGTATTTTAAAAAAAGAAAGGGATTATTCTTTTTGAAACAGACTAAAAAAAATAGGATC</genome_strand>
        <mrna_strand>TTGTGTCTCAAATTTGTCTGCGTGGTCAAGTCAGTGCTGAACTGAAAAGATTGCTCACCGGGGTTCCGGTACGCAATCGCCGCCGGCGACCACCAATTTCTTCATCGCATATCCCACTATAGTTAAAATTCATTGAATTATCTAGTACGGCCGAGATATGGACAGACAAAACCTAGCTTCATCCTCCGCTCCCCGTGGTGGTGCGACTGTCCATCCTCCCCCACAACACGATGCTTGGATCAATACTTACCGGAATTTGCATCCTCAATGGCAATCTCTTCTTCCTCCACCGCAACAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGCCATTCCAATATCAATATCCAGAGTTAATCAGGTAGATGCTGGAAGACTGGACATTGAAATGTCAGCCATGCTAAAAGAGCAGTTGGTTAAGGTCTTTTCTTTGATGAAG..........................................................................................................CCAGGAATGTTATTTCAATATGAACCAGAACTTGATGCTTTTCTTGAGTTTCTAATCTGGCGATTTTCTATCTGGGTTGATAAGCCTACTCCTGGTAATGCTCTCATGAATCTGAGATACAGAGATGAACGTGCAAGTGAGATTAGAGGAAAAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGGACTGGATTAGAGGGACCAGGACTTACTGTTGCTCAAAAGATATGGTACTGTGTTGCAACAGTTGGTGGTCAATATATATGGGCTCGTCTACAATCATTTTCTGCTTTTCGGAGATGGGGTGACTCTGAGCAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGTCCTTGGCACGTGGAGTGTGGTTGTTAATGCAACGGATGGAGGGTATCTATAAAGCAGCATCTTTTAGCAATTTACTTCTCTTTCTTTACACAGGAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCAGGAATCTCATTGAAAGAGCTTTAAGAGCTAGACTTGTTTATGGGAGCCCAAATATGAACAGAGCTGTGAGCTTTGAGTACATGAATCGTCAGTTGGTCTGGAATGAATTCTCG...............................................................................................................................................................................................................................................................................GAACTGCTGCTCTTGCTTCTTCCCCTTCTCAATTCAGCATCTGTCAAGAGTTTCCTTCGTCCATTCTCAAAGGACAAATCTTCAGATTCTTCAGTAGATGAAACTTTATGCCCCATCTGCCAGGGAACCCCATCAATTCCATTTGTAGCTATCCCTTGTCAGCATAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACTGTTACTACTGTCTTCAAACAAGGTGCTCTGCATCTTCATCGTTTCGTTGCCCCAGATGTGGTGAACCAGTTGCTGCTATGCAACGGCATGGTGGTTTAGTCAGCAACATTCCTCAGAAACAATGATTGTTCTGCAAAGTGATTGAAATGATAAAAAAAAGGGAAGCTAAGTTAAACTATAGATCAAAAGTTGCTCAAAAGACAACTTGACAATGAAACTAGGTATCTAGATTCCTTAATAAAGCTTATTGTTCTGCTTTATTGAGTGCTTTAATTTTTTAATAGTGTGGTTGTCCCTTTTCCTGTATTTTACATCTCATTTGTTTATTTAATTGAAAGATAATTTTCTCAA........................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAGGAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C00HBa0081D06-3cnAc/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U336494" ref_strand="+" ref_description="SGN-U336494        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: | Symbol: None | Pex2/Pex12 N-terminal domain-containing protein / zinc finger (C3HC4-type RING finger) family protein, contains Pfam profiles PF00097: zinc finger C3HC4 type (RING finger), PF04757: Pex2/Pex12 amino terminal region | chr1:30024637-30027655 FORWARD | Aliases: F20B17.23, F20B17_23(evalue: 4e-48, score=188) genbank/nr: Zinc(evalue: 5e-50, score=201)">
      <seq>gtgtataatcaatctgatttggaaggattgtcttggaaaatctcctttgtcttactttgtgtttgaagtgctaaagttgacagcttgatgcagtttcattttttctttcttgcatcaactgctataatttcagttgtagttctgtttccttttccatgttttttatagtgaggactggattagagggaccaggacttactgttgctcaaaagatatggtactgtgttgcaacagttggtggtcaatatatatgggctcgtctacaatcattttctgcttttcggagatggggtgactctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C00HBa0081D06-3cnAc/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C00HBa0081D06.1" temp_strand="-" temp_description="C00HBa0081D06.1  AC218144.2 htgs_phase:3 submitted_to_sgn_as:C12HBa0081D06">
        <position start="113520" stop="112621"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="113220" g_stop="112921" g_length="300"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="300" r_length="300" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C00HBa0081D06.1" gen_strand="-" ref_id="SGN-U336494" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>300</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C00HBa0081D06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U336494" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="113220" e_stop="112921"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGTATAATCAATCTGATTTGGAAGGATTGTCTTGGAAAATCTCCTTTGTCTTACTTTGTGTTTGAAGTGCTAAGGTTGACAGCTTGATGCAGTTTCATTTTTTCTTTCTTGCATCAACTGCTATAATTTCAGTTGTAGTTCTGTTTCCTTTTCCATGTTTTTTATAGTGAGGACTGGATTAGAGGGACCAGGACTTACTGTTGCTCAAAAGATATGGTACTGTGTTGCAACAGTTGGTGGTCAATATATATGGGCTCGTCTACAATCATTTTCTGCTTTTCGGAGATGGGGTGACTCTG</genome_strand>
        <mrna_strand>GTGTATAATCAATCTGATTTGGAAGGATTGTCTTGGAAAATCTCCTTTGTCTTACTTTGTGTTTGAAGTGCTAAAGTTGACAGCTTGATGCAGTTTCATTTTTTCTTTCTTGCATCAACTGCTATAATTTCAGTTGTAGTTCTGTTTCCTTTTCCATGTTTTTTATAGTGAGGACTGGATTAGAGGGACCAGGACTTACTGTTGCTCAAAAGATATGGTACTGTGTTGCAACAGTTGGTGGTCAATATATATGGGCTCGTCTACAATCATTTTCTGCTTTTCGGAGATGGGGTGACTCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C00HBa0081D06-3cnAc/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U330809" ref_strand="+" ref_description="SGN-U330809        Tomato 200607 #1 [2 ESTs aligned] arabidopsis/peptide: AT3G16240.1 | Symbol: None | delta tonoplast integral protein (delta-TIP), identical to delta tonoplast integral protein (delta-TIP) (GI:9279707)(GB:U39485) (Arabidopsis thaliana) (Plant Cell 8 (4), 587-599 (1996)) | chr3:5505430-5507056 FORWARD | Aliases: MYA6.10 (evalue: 2e-87, score=313) genbank/nr: gi|1439609|gb|AAB04557.1| delta-tonoplast intrinsic protein [Gossypium hirsutum] (evalue: 5e-91, score=333)">
      <seq>gtttattgcagcgtttaattaattttagtctcaaaatgccttgtatagcttaggacgttttgacgattcgctcaattgtgggtctattaaggcctatcttgctgaatttatctccaccttgcttttcgtcttcgccggtgttggttctgccattgcctacaataagttgacagcagatgctgctcttgatcctgccggactagttgcggtagcagtttgccatggatttgctctcttcgtggccgtttctattggtgctaacatctccggtggtcacgttaatcccgctgttacttttggtttagctcttggaggccaaattacccttctcaccggcctgttttactgggtggctcagcttttgggcgccatagttgcttgctgcctcctcaagtttgttaccggaggattgactgttccaatccacggtgtggcagctggtgtaggagctactgaaggagttgtaatggaaattatcatcacattcgcgttggtgtacactgtgtacgccacagcagctgaccccaagaagggatcattgggtacaattgcacctattgccattggtttcattgttggtgctaacattttggctgcgggcccattctccggaggttcaatgaatccagcccgttcttttggggcctgcagttgttagtggcaacttcgctggtaactggattta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C00HBa0081D06-3cnAc/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C00HBa0081D06.1" temp_strand="+" temp_description="C00HBa0081D06.1  AC218144.2 htgs_phase:3 submitted_to_sgn_as:C12HBa0081D06">
        <position start="118867" stop="120633"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="119167" g_stop="119327" g_length="161"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="161" r_length="161" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="119328" i_stop="119673" i_length="346">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="119674" g_stop="119924" g_length="251"/>
          <reference_exon_boundary r_type="cDNA" r_start="162" r_stop="412" r_length="251" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="119925" i_stop="120061" i_length="137">
            <donor d_prob="0.801" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="120062" g_stop="120333" g_length="272"/>
          <reference_exon_boundary r_type="cDNA" r_start="413" r_stop="685" r_length="273" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C00HBa0081D06.1" gen_strand="+" ref_id="SGN-U330809" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>684</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C00HBa0081D06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U330809" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="119167" e_stop="119327"/>
          <exon e_start="119674" e_stop="119924"/>
          <exon e_start="120062" e_stop="120333"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTTATTGCAGCGTTTAATTAATTTTAGTCTCAAAATGCCTTGTATAGCTTAGGACGTTTTGACGATTCGCTCAATTGTGGGTCTATTAAGGCCTATCTTGCTGAATTTATCTCCACCTTGCTTTTCGTCTTCGCCGGTGTTGGTTCTGCCATTGCCTACAGTTAATAACTACTCCTTCTTTTTTATATTTTTTCGTCCACTTTTGTTATTTGCCATGTTGCGTTTTCAATACTCAATTTGATTAATTTTTACAGATAAATTAAATTTTATTAGTTTGATATTCAAAAATTATTCGAAAAGTATTATAAATTGTAATTTTTTGCATATCAATATCATGAAAAAAATATATTCTGAGCTGTTGGACAAATTTTTTTTTTATAGTTTCGCACTGGAAAAGGAAACTATAACAATTAAAGTAGACGAAGATAGTAATTTTCGGCACCAATTTCCATGCAACGTAACGCTATTGAACCAAAGTAGCTGATAGATGATTAATTATTCTGCAGATAAGTTGACAGCAGATGCTGCTCTTGATCCTGCCGGACTAGTTGCGGTAGCAGTTTGCCATGGATTTGCTCTCTTCGTGGCCGTTTCTATTGGTGCTAACATCTCCGGTGGTCACGTTAATCCCGCTGTTACTTTTGGTTTAGCTCTTGGAGGCCAAATTACCCTTCTCACCGGCCTGTTTTACTGGGTGGCTCAGCTTTTGGGCGCCATAGTTGCTTGCTGCCTCCTCAAGTTTGTTACCGGAGGATTGGTAATTAGTTTTCAAATTATGACTTAGTTAGAATTGTGATAACCGATTCCAACTTGTTTGAAACTGAAGCCGTAATTATATATTAAAATTGAATTCAAAAATATCTAAATTTTTTTTATGGTTTTATTTCTACGCAGACTGTTCCAATCCACGGTGTGGCAGCTGGTGTAGGAGCTACTGAAGGAGTTGTAATGGAAATTATCATCACATTCGCGTTGGTGTACACTGTGTACGCCACAGCAGCTGACCCCAAGAAGGGATCATTGGGTACAATTGCACCTATTGCCATTGGTTTCATTGTTGGTGCTAACATTTTGGCTGCGGGCCCATTCTCCGGAGGTTCAATGAATCCAGCCCGTTCTTTT-GGGCCTGCAGTTGTTAGTGGCAACTTCGCTGGTAACTGGATTTA</genome_strand>
        <mrna_strand>GTTTATTGCAGCGTTTAATTAATTTTAGTCTCAAAATGCCTTGTATAGCTTAGGACGTTTTGACGATTCGCTCAATTGTGGGTCTATTAAGGCCTATCTTGCTGAATTTATCTCCACCTTGCTTTTCGTCTTCGCCGGTGTTGGTTCTGCCATTGCCTACA..........................................................................................................................................................................................................................................................................................................................................................ATAAGTTGACAGCAGATGCTGCTCTTGATCCTGCCGGACTAGTTGCGGTAGCAGTTTGCCATGGATTTGCTCTCTTCGTGGCCGTTTCTATTGGTGCTAACATCTCCGGTGGTCACGTTAATCCCGCTGTTACTTTTGGTTTAGCTCTTGGAGGCCAAATTACCCTTCTCACCGGCCTGTTTTACTGGGTGGCTCAGCTTTTGGGCGCCATAGTTGCTTGCTGCCTCCTCAAGTTTGTTACCGGAGGATTG.........................................................................................................................................ACTGTTCCAATCCACGGTGTGGCAGCTGGTGTAGGAGCTACTGAAGGAGTTGTAATGGAAATTATCATCACATTCGCGTTGGTGTACACTGTGTACGCCACAGCAGCTGACCCCAAGAAGGGATCATTGGGTACAATTGCACCTATTGCCATTGGTTTCATTGTTGGTGCTAACATTTTGGCTGCGGGCCCATTCTCCGGAGGTTCAATGAATCCAGCCCGTTCTTTTGGGGCCTGCAGTTGTTAGTGGCAACTTCGCTGGTAACTGGATTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C00HBa0081D06-3cnAc/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U325761" ref_strand="+" ref_description="SGN-U325761        Tomato 200607 #1 [5 ESTs aligned] arabidopsis/peptide: | Symbol: None | expressed protein | chr5:1880193-1885638 FORWARD | Aliases: MBL20.10, MBL20_10(evalue: 2e-30, score=130) genbank/nr: hypothetical(evalue: 1e-28, score=130)">
      <seq>ggactactgggcagcttatgatagaactggagaagtgcaaaaatttgctgatagaagtgcatctgatcaggcagcatctttgtttagtaaaggtggaatgggttcatccatcatattggacgtgaaagagaagccaatatatcaatatagatccagattgaatcaggccaccagctctgctgtgatggaccctgtgacactggtggagtcggaatgctctactgcacccaaaccaatgcatgaaaatttactaagaaaatctacgaccaagctgatatctgcaagtgttgatttctggatgggtactgaattgctctttacagacgtatcggatgctttagagctacttataaagcagttgaaaggccgtcaactcaccaaaagggagagaaagaaaatgaagagaacgctgggtgatatagctacccttgttcccataaccatcttaatgctaatccctgtttctgcagtgggtcatgcagcaatgctggcggcaatcaagaaatatgttccaagtttgattccttctccgttttcttctgaaaggcttgatctaatgaaacaattaaagagaacgaagaagaaagaagtccaagctcgaagcagcatagacaacccttcttctaaagttgtagagtgaatgcaagctgcgggaaacaaccttattatcatggtgttggtgcagcttaacttctgtagagtggcaaaaggcgttgcacatataccttataatagccaatgcaagaaactatcagtaagaggaaacagaaacaacgctttttcacaagcacatgtacacacagatcctgctaaatttagttctaaagaaagcaactttgtttttgatcaactgtattttctttaggcgtcatctgacaattgttcatatttatccatggtttaaaacgaagctttcgagttcctaaatttctaattcttgcaatcatctgactatttttcatatttgtacagtgtatacttatgagctcttagtagcattttctttttactgaggagcaggtggatgtttttaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C00HBa0081D06-3cnAc/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C00HBa0081D06.1" temp_strand="-" temp_description="C00HBa0081D06.1  AC218144.2 htgs_phase:3 submitted_to_sgn_as:C12HBa0081D06">
        <position start="123972" stop="121489"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="123672" g_stop="123643" g_length="30"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="30" r_length="30" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="123642" i_stop="123565" i_length="78">
            <donor d_prob="0.452" d_score="0.00"/>
            <acceptor a_prob="0.033" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="123564" g_stop="123429" g_length="136"/>
          <reference_exon_boundary r_type="cDNA" r_start="31" r_stop="166" r_length="136" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="123428" i_stop="123187" i_length="242">
            <donor d_prob="0.948" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="123186" g_stop="123064" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="167" r_stop="289" r_length="123" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="123063" i_stop="122984" i_length="80">
            <donor d_prob="0.093" d_score="1.00"/>
            <acceptor a_prob="0.774" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="122983" g_stop="122813" g_length="171"/>
          <reference_exon_boundary r_type="cDNA" r_start="290" r_stop="460" r_length="171" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="122812" i_stop="122451" i_length="362">
            <donor d_prob="0.741" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="122450" g_stop="122391" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="461" r_stop="520" r_length="60" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="122390" i_stop="122315" i_length="76">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.805" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="122314" g_stop="121800" g_length="515"/>
          <reference_exon_boundary r_type="cDNA" r_start="521" r_stop="1035" r_length="515" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="1036" polyA_stop="1054"/>
      <MATCH_line gen_id="C00HBa0081D06.1" gen_strand="-" ref_id="SGN-U325761" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>1035</cumulative_length_of_scored_exons>
        <coverage percentage="0.982" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C00HBa0081D06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U325761" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="123672" e_stop="123643"/>
          <exon e_start="123564" e_stop="123429"/>
          <exon e_start="123186" e_stop="123064"/>
          <exon e_start="122983" e_stop="122813"/>
          <exon e_start="122450" e_stop="122391"/>
          <exon e_start="122314" e_stop="121800"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGACTACTGGGCAGCTTATGATAGAACTGGGTATGTTGGATTTAATGACAAAATTTAATCTTCTGTTGCTGAACATTCCAATGATGAGTTGCCTATTCTCTTAAACAGAGAAGTGCAAAAATTTGCTGATAGAAGTGCATCTGATCAGGCAGCATCTTTGTTTAGTAAAGGTGGAATGGGTTCATCCATCATATTGGACGTGAAAGAGAAGCCAATATATCAATATAGATCCAGATTGAATCAGGTACAAGCACCAGATTTAATAAATAGGGACTGCTATACTGAGTTTATTCTTTAGTGAATCACTCTTGGTTCAAAATGTCTCGATATCGACTGTCTGTCAAGAAAATGCATCTCTAGGCATAGTTGAAAGTTCTTACTTCATTGATAAAAAATGATCATCTAATATTTGTGTACAACCTCTTAACTCGGCACTCAGTTTCTGAAACCCTTTATAGAGTGGTAATTTCTTTTATCAAATCACAGGCCACCAGCTCTGCTGTGATGGACCCTGTGACACTGGTGGAGTCGGAATGCTCTACTGCACCCAAACCAATGCATGAAAATTTACTAAGAAAATCTACGACCAAGCTGATATCTGCAAGTGTTGTAAGTTATTATCCAGTTATTCAATCATATCAAAAGAGTTTGCCCTATAGTAGTTAATTTGTTATTGCAATATGCTATAGGATTTCTGGATGGGTACTGAATTGCTCTTTACAGACGTATCGGATGCTTTAGAGCTACTTATAAAGCAGTTGAAAGGCCGTCAACTCACCAAAAGGGAGAGAAAGAAAATGAAGAGAACGCTGGGTGATATAGCTACCCTTGTTCCCATAACCATCTTAATGCTAATCCCTGTAAGGATCAACTATATTAAACAGCAGACTTTCGTTCCTTCTGCTCAAATCTTATATTCTCTGCTGAATTAACTTGTCTTCTGGTCAATTTCATGCTCTATGCTAGAAATGTTTTAGTACCTATAGAACTTAGATGCCGAGGTTGAAAGGACTACAAAGTAAGCAGGCTAAATTCTTCTTTTAAGGAAATGATCCGGAAAATGTGCCATGTCTACCCTGGTTTTCAAGATTACCAAAAAAAGTTAAAAATTGACGCTCGTTTCCACGAAATTGTACTAATGGTTTCACAATGTCAATGTGAATTTTTTTTTCCCGTATTGATGAAAGAGCTTCTCAAAGATTCACTGTGTTAAATTTATCAGGTTTCTGCAGTGGGTCATGCAGCAATGCTGGCGGCAATCAAGAAATATGTTCCAAGTTTGGTAATTAACTGTAATCTATCATTCTATACATTATTCCATCCTGTCATTTGCTTATATGTTAATCATTGTGGCCCAGATTCCTTCTCCGTTTTCTTCTGAAAGGCTTGATCTAATGAAACAATTAAAGAGAACGAAGAAGAAAGAAGTCCAAGCTCGAAGCAGCATAGACAACCCTTCTTCTAAAGTTGTAGAGTGAATGCAAGCTGCGGGAAACAACCTTATTATCATGGTGTTGGTGCAGCTTAACTTCTGTAGAGTGGCAAGAGGCGTTGCACATATACCTTATAATAGCCAATGCAAGAAACTATCAGTAAGAGGAAACAGAAACAACGCTTTTTCACAAGCACATGTACACACAGATCCTGCTAAATTTAGTTCTAGAGAAAGCAACTTTGTTTTTGATCAACTGTATTTTCTCTAGGCGTCATCTGACAATTGTTCATATTTATCCATGGTTTAAAACGAAGCTTTCGAGTTCCTAAATTTCTAATTCTTGCAATCATCTGACTATTTTTCATATTTGTACAGTGTATACTTATGAGCTCTTAGTAGCATTTTCTTTTTACTGAGGAGCAGGTGGATGTTTTTAAA</genome_strand>
        <mrna_strand>GGACTACTGGGCAGCTTATGATAGAACTGG..............................................................................AGAAGTGCAAAAATTTGCTGATAGAAGTGCATCTGATCAGGCAGCATCTTTGTTTAGTAAAGGTGGAATGGGTTCATCCATCATATTGGACGTGAAAGAGAAGCCAATATATCAATATAGATCCAGATTGAATCAG..................................................................................................................................................................................................................................................GCCACCAGCTCTGCTGTGATGGACCCTGTGACACTGGTGGAGTCGGAATGCTCTACTGCACCCAAACCAATGCATGAAAATTTACTAAGAAAATCTACGACCAAGCTGATATCTGCAAGTGTT................................................................................GATTTCTGGATGGGTACTGAATTGCTCTTTACAGACGTATCGGATGCTTTAGAGCTACTTATAAAGCAGTTGAAAGGCCGTCAACTCACCAAAAGGGAGAGAAAGAAAATGAAGAGAACGCTGGGTGATATAGCTACCCTTGTTCCCATAACCATCTTAATGCTAATCCCT..........................................................................................................................................................................................................................................................................................................................................................................GTTTCTGCAGTGGGTCATGCAGCAATGCTGGCGGCAATCAAGAAATATGTTCCAAGTTTG............................................................................ATTCCTTCTCCGTTTTCTTCTGAAAGGCTTGATCTAATGAAACAATTAAAGAGAACGAAGAAGAAAGAAGTCCAAGCTCGAAGCAGCATAGACAACCCTTCTTCTAAAGTTGTAGAGTGAATGCAAGCTGCGGGAAACAACCTTATTATCATGGTGTTGGTGCAGCTTAACTTCTGTAGAGTGGCAAAAGGCGTTGCACATATACCTTATAATAGCCAATGCAAGAAACTATCAGTAAGAGGAAACAGAAACAACGCTTTTTCACAAGCACATGTACACACAGATCCTGCTAAATTTAGTTCTAAAGAAAGCAACTTTGTTTTTGATCAACTGTATTTTCTTTAGGCGTCATCTGACAATTGTTCATATTTATCCATGGTTTAAAACGAAGCTTTCGAGTTCCTAAATTTCTAATTCTTGCAATCATCTGACTATTTTTCATATTTGTACAGTGTATACTTATGAGCTCTTAGTAGCATTTTCTTTTTACTGAGGAGCAGGTGGATGTTTTTAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>22</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="-" PGL_start="7481" PGL_stop="2666"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="7481" e_stop="7420"/>
            <exon e_start="6911" e_stop="6723"/>
            <exon e_start="6382" e_stop="6242"/>
            <exon e_start="6144" e_stop="6070"/>
            <exon e_start="5979" e_stop="5803"/>
            <exon e_start="5709" e_stop="5618"/>
            <exon e_start="5524" e_stop="5408"/>
            <exon e_start="4817" e_stop="4703"/>
            <exon e_start="4582" e_stop="4511"/>
            <exon e_start="4013" e_stop="3817"/>
            <exon e_start="3723" e_stop="3630"/>
            <exon e_start="3069" e_stop="2963"/>
            <exon e_start="2710" e_stop="2666"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.923" acc_prob="0.980" e_score="1.000"/>
          <exon-intron don_prob="0.643" acc_prob="0.901" e_score="1.000"/>
          <exon-intron don_prob="0.954" acc_prob="0.991" e_score="1.000"/>
          <exon-intron don_prob="0.927" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.952" acc_prob="0.991" e_score="1.000"/>
          <exon-intron don_prob="0.955" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.724" e_score="1.000"/>
          <exon-intron don_prob="0.860" acc_prob="0.989" e_score="1.000"/>
          <exon-intron don_prob="0.890" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.989" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.961" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.898" acc_prob="1.000" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="7481" e_stop="7420" e_length="62"/>
          </exon>
          <intron i_serial="1" don_prob="0.923" acc_prob="0.980">
            <gDNA_intron_boundary i_start="7419" i_stop="6912" i_length="508"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="6911" e_stop="6723" e_length="189"/>
          </exon>
          <intron i_serial="2" don_prob="0.643" acc_prob="0.901">
            <gDNA_intron_boundary i_start="6722" i_stop="6383" i_length="340"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="6382" e_stop="6242" e_length="141"/>
          </exon>
          <intron i_serial="3" don_prob="0.954" acc_prob="0.991">
            <gDNA_intron_boundary i_start="6241" i_stop="6145" i_length="97"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="6144" e_stop="6070" e_length="75"/>
          </exon>
          <intron i_serial="4" don_prob="0.927" acc_prob="0.998">
            <gDNA_intron_boundary i_start="6069" i_stop="5980" i_length="90"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="5979" e_stop="5803" e_length="177"/>
          </exon>
          <intron i_serial="5" don_prob="0.952" acc_prob="0.991">
            <gDNA_intron_boundary i_start="5802" i_stop="5710" i_length="93"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="5709" e_stop="5618" e_length="92"/>
          </exon>
          <intron i_serial="6" don_prob="0.955" acc_prob="0.992">
            <gDNA_intron_boundary i_start="5617" i_stop="5525" i_length="93"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="5524" e_stop="5408" e_length="117"/>
          </exon>
          <intron i_serial="7" don_prob="1.000" acc_prob="0.724">
            <gDNA_intron_boundary i_start="5407" i_stop="4818" i_length="590"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="4817" e_stop="4703" e_length="115"/>
          </exon>
          <intron i_serial="8" don_prob="0.860" acc_prob="0.989">
            <gDNA_intron_boundary i_start="4702" i_stop="4583" i_length="120"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="4582" e_stop="4511" e_length="72"/>
          </exon>
          <intron i_serial="9" don_prob="0.890" acc_prob="0.999">
            <gDNA_intron_boundary i_start="4510" i_stop="4014" i_length="497"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="4013" e_stop="3817" e_length="197"/>
          </exon>
          <intron i_serial="10" don_prob="0.989" acc_prob="0.993">
            <gDNA_intron_boundary i_start="3816" i_stop="3724" i_length="93"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="3723" e_stop="3630" e_length="94"/>
          </exon>
          <intron i_serial="11" don_prob="0.961" acc_prob="0.999">
            <gDNA_intron_boundary i_start="3629" i_stop="3070" i_length="560"/>
          </intron>
          <exon e_serial="12" e_score="1.000">
            <gDNA_exon_boundary e_start="3069" e_stop="2963" e_length="107"/>
          </exon>
          <intron i_serial="12" don_prob="0.898" acc_prob="1.000">
            <gDNA_intron_boundary i_start="2962" i_stop="2711" i_length="252"/>
          </intron>
          <exon e_serial="13" e_score="1.000">
            <gDNA_exon_boundary e_start="2710" e_stop="2666" e_length="45"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7481" stop="7420"/>
              <exon start="6911" stop="6723"/>
              <exon start="6382" stop="6242"/>
              <exon start="6144" stop="6070"/>
              <exon start="5979" stop="5803"/>
              <exon start="5709" stop="5618"/>
              <exon start="5524" stop="5408"/>
              <exon start="4817" stop="4703"/>
              <exon start="4582" stop="4511"/>
              <exon start="4013" stop="3817"/>
              <exon start="3723" stop="3630"/>
              <exon start="3069" stop="2963"/>
              <exon start="2710" stop="2666"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U316885" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CTGATGGAGAAAGATTGCCTTTGGCGGTCAAGGAATTGGGAACTTGTGACCTATACCCACAA : AGCTTAAAGCATAACCCCAATGGAAGGTTTGTTGTTGTTTGTGGAGACGGTGAGTATATCATATATACTGCTCTGGCCTGGAGAAATAGGTCATTTGGCTCAGCTCTGGAATTTGTTTGGTCGTCTGATGGAGAGTATGCTATCCGAGAAAGTACTTCAAGGATTAAGATTTTCAGCAAAAATTTCCAG : GAAAAAAAGAGTATCCGCCCGACTTTCTCTGCTGAGCACATCTATGGGGGTACCTTATTGGCAATGTGCTCAAATGATTTCATTTGCTTTTACGATTGGATTGAGTGCAGGTTGATACGACGTATTGATGTTAATGTCAAA : AACCTCTACTGGGCTGACAGTGGTGATCTGGTGGCTATTGCTAGTGATACTTCATTCTACATACTGAAGTATAAT : CGTGATGTTGTCTCTGCACATTTAGATAGTGGAAGATCTGTAGATGAACAAGGTGTTGAAGATGCTTTTGAACTTCTTTATGAGATAAATGAACGTGTCAGAACTGGAATTTGGGTAGGAGATTGTTTCATTTACAACAATTCTTCTTCGAGACTGAATTACTGTGTAGGCGGCGAG : GTGACCACAATGTTTCACTTAGACCGACCCATGTACCTGCTGGGATATCTCGCTAATCAAAGTAGAGTTTTCCTGATTGACAAAGAGTTCAA : TGTCGTGGGATATACTCTTCTGCTCAGCTTGATAGAGTACAAGACACTTGTGATGCGTGGTGACTGGGACAGAGCTAATGCAGTCTTACCATCAATTCCTAAGGATCACCATAACAG : TGTTGCTCGTTTCTTGGAATCACGGGGTATGATTGAGGAAGCATTGGAAGTTGCAACAGACGCTGACTACAGATTTGAACTTGCCATACAGTTGGGTAAATTAGAAATTGCAAAG : GAAATCGCTGTAGTAGCACAGAGTGAATCCAAATGGAAGCAGTTGGGTGAACTGGCAATGTCTGCTGGAATG : CTGGAGATGGCAGAGGATTGTTTGAAATACGCTAATGACTTGAGTGGTTTGCTGATGCTTTATTCCTCGTTAGGAGATGCTGAAGGAATGGCTGAATTAGCATCTCTTGCAAAAGAGCATGGAAGAAACAATGTTGCATTCCTTTGCCTGTTCCTCCTGGGTAAAGTGGAAGATTGTGTTCAGCTGTTGGTTGACAG : CAACCGGATACCTGAGGCTGCATTTATGGCAAGATCTTACCTTCCAAGTAAGGTTTCTGAAATAGTTGCAATGTGGAGGAAGGATCTTAATAAG : GTTAACCAGAAAGCAGCAGAAGCTTTGGCTGATCCTGAAGAATATCCCAACATGTTTGAGCACTGGCAAATTGCACATGCAGTTGAAGCTAGAGTCGCAGAGGAAAG : GGGTGTATACCCACCAGCAGCAGATTATGGAAATTATGCTGATAG</gDNA_template>
            <first_frame> L  M  E  K  D  C  L  W  R  S  R  N  W  E  L  V  T  Y  T  H  K :   A  *  S  I  T  P  M  E  G  L  L  L  F  V  E  T  V  S  I  S  Y  I  L  L  W  P  G  E  I  G  H  L  A  Q  L  W  N  L  F  G  R  L  M  E  S  M  L  S  E  K  V  L  Q  G  L  R  F  S  A  K  I  S  R :   K  K  R  V  S  A  R  L  S  L  L  S  T  S  M  G  V  P  Y  W  Q  C  A  Q  M  I  S  F  A  F  T  I  G  L  S  A  G  *  Y  D  V  L  M  L  M  S  K :   T  S  T  G  L  T  V  V  I  W  W  L  L  L  V  I  L  H  S  T  Y  *  S  I  I :   V  M  L  S  L  H  I  *  I  V  E  D  L  *  M  N  K  V  L  K  M  L  L  N  F  F  M  R  *  M  N  V  S  E  L  E  F  G  *  E  I  V  S  F  T  T  I  L  L  R  D  *  I  T  V  *  A  A  R :   *  P  Q  C  F  T  *  T  D  P  C  T  C  W  D  I  S  L  I  K  V  E  F  S  *  L  T  K  S  S   : M  S  W  D  I  L  F  C  S  A  *  *  S  T  R  H  L  *  C  V  V  T  G  T  E  L  M  Q  S  Y  H  Q  F  L  R  I  T  I  T   : V  L  L  V  S  W  N  H  G  V  *  L  R  K  H  W  K  L  Q  Q  T  L  T  T  D  L  N  L  P  Y  S  W  V  N  *  K  L  Q  R :   K  S  L  *  *  H  R  V  N  P  N  G  S  S  W  V  N  W  Q  C  L  L  E  C :   W  R  W  Q  R  I  V  *  N  T  L  M  T  *  V  V  C  *  C  F  I  P  R  *  E  M  L  K  E  W  L  N  *  H  L  L  Q  K  S  M  E  E  T  M  L  H  S  F  A  C  S  S  W  V  K  W  K  I  V  F  S  C  W  L  T   : A  T  G  Y  L  R  L  H  L  W  Q  D  L  T  F  Q  V  R  F  L  K  *  L  Q  C  G  G  R  I  L  I  R :   L  T  R  K  Q  Q  K  L  W  L  I  L  K  N  I  P  T  C  L  S  T  G  K  L  H  M  Q  L  K  L  E  S  Q  R  K   : G  V  Y  T  H  Q  Q  Q  I  M  E  I  M  L  I  </first_frame>
            <second_frame>  *  W  R  K  I  A  F  G  G  Q  G  I  G  N  L  *  P  I  P  T   : K  L  K  A  *  P  Q  W  K  V  C  C  C  L  W  R  R  *  V  Y  H  I  Y  C  S  G  L  E  K  *  V  I  W  L  S  S  G  I  C  L  V  V  *  W  R  V  C  Y  P  R  K  Y  F  K  D  *  D  F  Q  Q  K  F  P   : G  K  K  E  Y  P  P  D  F  L  C  *  A  H  L  W  G  Y  L  I  G  N  V  L  K  *  F  H  L  L  L  R  L  D  *  V  Q  V  D  T  T  Y  *  C  *  C  Q   : K  P  L  L  G  *  Q  W  *  S  G  G  Y  C  *  *  Y  F  I  L  H  T  E  V  *   : S  *  C  C  L  C  T  F  R  *  W  K  I  C  R  *  T  R  C  *  R  C  F  *  T  S  L  *  D  K  *  T  C  Q  N  W  N  L  G  R  R  L  F  H  L  Q  Q  F  F  F  E  T  E  L  L  C  R  R  R   : G  D  H  N  V  S  L  R  P  T  H  V  P  A  G  I  S  R  *  S  K  *  S  F  P  D  *  Q  R  V  Q  :  C  R  G  I  Y  S  S  A  Q  L  D  R  V  Q  D  T  C  D  A  W  *  L  G  Q  S  *  C  S  L  T  I  N  S  *  G  S  P  *  Q  :  C  C  S  F  L  G  I  T  G  Y  D  *  G  S  I  G  S  C  N  R  R  *  L  Q  I  *  T  C  H  T  V  G  *  I  R  N  C  K   : G  N  R  C  S  S  T  E  *  I  Q  M  E  A  V  G  *  T  G  N  V  C  W  N   : A  G  D  G  R  G  L  F  E  I  R  *  *  L  E  W  F  A  D  A  L  F  L  V  R  R  C  *  R  N  G  *  I  S  I  S  C  K  R  A  W  K  K  Q  C  C  I  P  L  P  V  P  P  G  *  S  G  R  L  C  S  A  V  G  *  Q  :  Q  P  D  T  *  G  C  I  Y  G  K  I  L  P  S  K  *  G  F  *  N  S  C  N  V  E  E  G  S  *  *   : G  *  P  E  S  S  R  S  F  G  *  S  *  R  I  S  Q  H  V  *  A  L  A  N  C  T  C  S  *  S  *  S  R  R  G  K  :  G  C  I  P  T  S  S  R  L  W  K  L  C  *  * </second_frame>
            <third_frame>   D  G  E  R  L  P  L  A  V  K  E  L  G  T  C  D  L  Y  P  Q  :  S  L  K  H  N  P  N  G  R  F  V  V  V  C  G  D  G  E  Y  I  I  Y  T  A  L  A  W  R  N  R  S  F  G  S  A  L  E  F  V  W  S  S  D  G  E  Y  A  I  R  E  S  T  S  R  I  K  I  F  S  K  N  F  Q  :  E  K  K  S  I  R  P  T  F  S  A  E  H  I  Y  G  G  T  L  L  A  M  C  S  N  D  F  I  C  F  Y  D  W  I  E  C  R  L  I  R  R  I  D  V  N  V  K  :  N  L  Y  W  A  D  S  G  D  L  V  A  I  A  S  D  T  S  F  Y  I  L  K  Y  N  :  R  D  V  V  S  A  H  L  D  S  G  R  S  V  D  E  Q  G  V  E  D  A  F  E  L  L  Y  E  I  N  E  R  V  R  T  G  I  W  V  G  D  C  F  I  Y  N  N  S  S  S  R  L  N  Y  C  V  G  G  E  :  V  T  T  M  F  H  L  D  R  P  M  Y  L  L  G  Y  L  A  N  Q  S  R  V  F  L  I  D  K  E  F  N :   V  V  G  Y  T  L  L  L  S  L  I  E  Y  K  T  L  V  M  R  G  D  W  D  R  A  N  A  V  L  P  S  I  P  K  D  H  H  N  S :   V  A  R  F  L  E  S  R  G  M  I  E  E  A  L  E  V  A  T  D  A  D  Y  R  F  E  L  A  I  Q  L  G  K  L  E  I  A  K  :  E  I  A  V  V  A  Q  S  E  S  K  W  K  Q  L  G  E  L  A  M  S  A  G  M  :  L  E  M  A  E  D  C  L  K  Y  A  N  D  L  S  G  L  L  M  L  Y  S  S  L  G  D  A  E  G  M  A  E  L  A  S  L  A  K  E  H  G  R  N  N  V  A  F  L  C  L  F  L  L  G  K  V  E  D  C  V  Q  L  L  V  D  S :   N  R  I  P  E  A  A  F  M  A  R  S  Y  L  P  S  K  V  S  E  I  V  A  M  W  R  K  D  L  N  K  :  V  N  Q  K  A  A  E  A  L  A  D  P  E  E  Y  P  N  M  F  E  H  W  Q  I  A  H  A  V  E  A  R  V  A  E  E  R :   G  V  Y  P  P  A  A  D  Y  G  N  Y  A  D   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C00HBa0081D06.1" strand="-"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="7479" stop="7420"/>
                    <exon start="6911" stop="6723"/>
                    <exon start="6382" stop="6242"/>
                    <exon start="6144" stop="6070"/>
                    <exon start="5979" stop="5803"/>
                    <exon start="5709" stop="5618"/>
                    <exon start="5524" stop="5408"/>
                    <exon start="4817" stop="4703"/>
                    <exon start="4582" stop="4511"/>
                    <exon start="4013" stop="3817"/>
                    <exon start="3723" stop="3630"/>
                    <exon start="3069" stop="2963"/>
                    <exon start="2710" stop="2668"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1479</number_coding_nucleotides>
                  <number_encoded_amino_acids>493</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DGERLPLAVKELGTCDLYPQSLKHNPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEFVWSSDGEYAIRESTSRIKIFSKNFQEKKSIRPTFSAEHIYGGTLLAMCSNDFICFYDWIECRLIRRIDVNVKNLYWADSGDLVAIASDTSFYILKYNRDVVSAHLDSGRSVDEQGVEDAFELLYEINERVRTGIWVGDCFIYNNSSSRLNYCVGGEVTTMFHLDRPMYLLGYLANQSRVFLIDKEFNVVGYTLLLSLIEYKTLVMRGDWDRANAVLPSIPKDHHNSVARFLESRGMIEEALEVATDADYRFELAIQLGKLEIAKEIAVVAQSESKWKQLGELAMSAGMLEMAEDCLKYANDLSGLLMLYSSLGDAEGMAELASLAKEHGRNNVAFLCLFLLGKVEDCVQLLVDSNRIPEAAFMARSYLPSKVSEIVAMWRKDLNKVNQKAAEALADPEEYPNMFEHWQIAHAVEARVAEERGVYPPAADYGNYAD</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="+" PGL_start="21765" PGL_stop="22346"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="21765" e_stop="22346"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.990"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.990">
            <gDNA_exon_boundary e_start="21765" e_stop="22346" e_length="582"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21765" stop="22346"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U330098" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CCAATGTGTTACCCGAGAGAACGTCCTGGACGATTCGTTCCTCCTGATGAAGGGCAGAGAAGGGAACAAGTGGAGATACAAGTTGTAAGCAGAGAAGTATCAAATGGAAATGGATCATCAGCTGAAGCTGGAACAATGAAACAATGTGTTTGTTCCCCTACACATCATCCAGGCTCATTCAGGTGTAGGCATCATCATGCTGATTACAAATGGGCTGCTCAACAGGGAACTATTAAGACTGCTGATCATTAGTTCCCTACGTGAACTCACATGTAAAAATTCATGACATTCATCTGTCCTGTATTTACTTTATTTTCTACGCTTCTTCATCTATATGTGTGTTTTCTTTACCCTGGTTATATTAAGACTTGTAATATCATTACGAAACTGAGTCACTTTCAAGAAATAGCCTATAAAATTTCAAATAGAGTTGATTTCTCGGATGGTCACTTGTTTTAGAAAGTCACTTTCTTTGTTGAAGAAAATTTGAATCAGAAGAAATGTGATTTTCTAAGATAATAACTATTAGTTGAGTGACCATCTGAGAAATCAACCCTCACACATGTGTTTCAAATTTTCAAT</gDNA_template>
            <first_frame> P  M  C  Y  P  R  E  R  P  G  R  F  V  P  P  D  E  G  Q  R  R  E  Q  V  E  I  Q  V  V  S  R  E  V  S  N  G  N  G  S  S  A  E  A  G  T  M  K  Q  C  V  C  S  P  T  H  H  P  G  S  F  R  C  R  H  H  H  A  D  Y  K  W  A  A  Q  Q  G  T  I  K  T  A  D  H  *  F  P  T  *  T  H  M  *  K  F  M  T  F  I  C  P  V  F  T  L  F  S  T  L  L  H  L  Y  V  C  F  L  Y  P  G  Y  I  K  T  C  N  I  I  T  K  L  S  H  F  Q  E  I  A  Y  K  I  S  N  R  V  D  F  S  D  G  H  L  F  *  K  V  T  F  F  V  E  E  N  L  N  Q  K  K  C  D  F  L  R  *  *  L  L  V  E  *  P  S  E  K  S  T  L  T  H  V  F  Q  I  F  N </first_frame>
            <second_frame>  Q  C  V  T  R  E  N  V  L  D  D  S  F  L  L  M  K  G  R  E  G  N  K  W  R  Y  K  L  *  A  E  K  Y  Q  M  E  M  D  H  Q  L  K  L  E  Q  *  N  N  V  F  V  P  L  H  I  I  Q  A  H  S  G  V  G  I  I  M  L  I  T  N  G  L  L  N  R  E  L  L  R  L  L  I  I  S  S  L  R  E  L  T  C  K  N  S  *  H  S  S  V  L  Y  L  L  Y  F  L  R  F  F  I  Y  M  C  V  F  F  T  L  V  I  L  R  L  V  I  S  L  R  N  *  V  T  F  K  K  *  P  I  K  F  Q  I  E  L  I  S  R  M  V  T  C  F  R  K  S  L  S  L  L  K  K  I  *  I  R  R  N  V  I  F  *  D  N  N  Y  *  L  S  D  H  L  R  N  Q  P  S  H  M  C  F  K  F  S   </second_frame>
            <third_frame>   N  V  L  P  E  R  T  S  W  T  I  R  S  S  *  *  R  A  E  K  G  T  S  G  D  T  S  C  K  Q  R  S  I  K  W  K  W  I  I  S  *  S  W  N  N  E  T  M  C  L  F  P  Y  T  S  S  R  L  I  Q  V  *  A  S  S  C  *  L  Q  M  G  C  S  T  G  N  Y  *  D  C  *  S  L  V  P  Y  V  N  S  H  V  K  I  H  D  I  H  L  S  C  I  Y  F  I  F  Y  A  S  S  S  I  C  V  F  S  L  P  W  L  Y  *  D  L  *  Y  H  Y  E  T  E  S  L  S  R  N  S  L  *  N  F  K  *  S  *  F  L  G  W  S  L  V  L  E  S  H  F  L  C  *  R  K  F  E  S  E  E  M  *  F  S  K  I  I  T  I  S  *  V  T  I  *  E  I  N  P  H  T  C  V  S  N  F  Q  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C00HBa0081D06.1" strand="+"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="21765" stop="22016"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>249</number_coding_nucleotides>
                  <number_encoded_amino_acids>83</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PMCYPRERPGRFVPPDEGQRREQVEIQVVSREVSNGNGSSAEAGTMKQCVCSPTHHPGSFRCRHHHADYKWAAQQGTIKTADH*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="+" PGL_start="32845" PGL_stop="35704"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="32845" e_stop="32943"/>
            <exon e_start="35061" e_stop="35704"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.996" e_score="0.970"/>
          <exon-only e_score="0.995"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.970">
            <gDNA_exon_boundary e_start="32845" e_stop="32943" e_length="99"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.996">
            <gDNA_intron_boundary i_start="32944" i_stop="35060" i_length="2117"/>
          </intron>
          <exon e_serial="2" e_score="0.995">
            <gDNA_exon_boundary e_start="35061" e_stop="35704" e_length="644"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32845" stop="32943"/>
              <exon start="35061" stop="35704"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U332084" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GGTTCTGCTTTCAACATCCTCCGCCGTGTTGCCGCCACTGAAGGACCTCTGGCTCTATACAGAGGCATGGCTGCTCCTCTCGCTTCCGTCACATTTCAG : AACGCCATGGTATTTCAGATTTATGCAGTGCTATCTCGAGCATTGGACAGGAATGTTCCAGCCAGTGATCCACCCTCCTACAAAGGAGTGGCCTTAGGTGGATTTGGAACAGGAGCATTACAAAGCCTAATGCTCACTCCTGTCGAACTTGTGAAAATTCGACTTCAGTTGCAACAGAGAAACATCCTGGATAACAAAAATCAAATGACTAGTTGTAAGGGTCCAACTGATGTGGCAAGAAACATATTCAGACAAGAAGGATGGAGGGGAATTTATCGCGGATTAACAATTACAGTCCTCAGAGATGCACCAGCTCACGGCCTATATTTCTGGACATACGAGTATGTAAGAGAGCAACTTCATCCAGGATGTCGTAAGAATGGTCAAGAGAGCTTTAGAACAATGCTTATAGCAGGTGGTCTTGCAGGAGTAGCTAGCTGGATATGCTGCTATCCCTTAGATGTTATTAAAACCCGATTCCAGGCTCAGTCACAATCTACACCATTGAGATATACTGGCATTGTTGATTGTTTCAGGAGAAGTGTGAAACAAGAGGGATATAATGTGCTCTGGAGAGGTTTGGGAACTGCAGTTGCCAGAGCATTTGTAGTGAATGGGGCTATATTCACTGCCTATGAAACTGC</gDNA_template>
            <first_frame> G  S  A  F  N  I  L  R  R  V  A  A  T  E  G  P  L  A  L  Y  R  G  M  A  A  P  L  A  S  V  T  F  Q  :  N  A  M  V  F  Q  I  Y  A  V  L  S  R  A  L  D  R  N  V  P  A  S  D  P  P  S  Y  K  G  V  A  L  G  G  F  G  T  G  A  L  Q  S  L  M  L  T  P  V  E  L  V  K  I  R  L  Q  L  Q  Q  R  N  I  L  D  N  K  N  Q  M  T  S  C  K  G  P  T  D  V  A  R  N  I  F  R  Q  E  G  W  R  G  I  Y  R  G  L  T  I  T  V  L  R  D  A  P  A  H  G  L  Y  F  W  T  Y  E  Y  V  R  E  Q  L  H  P  G  C  R  K  N  G  Q  E  S  F  R  T  M  L  I  A  G  G  L  A  G  V  A  S  W  I  C  C  Y  P  L  D  V  I  K  T  R  F  Q  A  Q  S  Q  S  T  P  L  R  Y  T  G  I  V  D  C  F  R  R  S  V  K  Q  E  G  Y  N  V  L  W  R  G  L  G  T  A  V  A  R  A  F  V  V  N  G  A  I  F  T  A  Y  E  T   </first_frame>
            <second_frame>  V  L  L  S  T  S  S  A  V  L  P  P  L  K  D  L  W  L  Y  T  E  A  W  L  L  L  S  L  P  S  H  F  R :   T  P  W  Y  F  R  F  M  Q  C  Y  L  E  H  W  T  G  M  F  Q  P  V  I  H  P  P  T  K  E  W  P  *  V  D  L  E  Q  E  H  Y  K  A  *  C  S  L  L  S  N  L  *  K  F  D  F  S  C  N  R  E  T  S  W  I  T  K  I  K  *  L  V  V  R  V  Q  L  M  W  Q  E  T  Y  S  D  K  K  D  G  G  E  F  I  A  D  *  Q  L  Q  S  S  E  M  H  Q  L  T  A  Y  I  S  G  H  T  S  M  *  E  S  N  F  I  Q  D  V  V  R  M  V  K  R  A  L  E  Q  C  L  *  Q  V  V  L  Q  E  *  L  A  G  Y  A  A  I  P  *  M  L  L  K  P  D  S  R  L  S  H  N  L  H  H  *  D  I  L  A  L  L  I  V  S  G  E  V  *  N  K  R  D  I  M  C  S  G  E  V  W  E  L  Q  L  P  E  H  L  *  *  M  G  L  Y  S  L  P  M  K  L  </second_frame>
            <third_frame>   F  C  F  Q  H  P  P  P  C  C  R  H  *  R  T  S  G  S  I  Q  R  H  G  C  S  S  R  F  R  H  I  S   : E  R  H  G  I  S  D  L  C  S  A  I  S  S  I  G  Q  E  C  S  S  Q  *  S  T  L  L  Q  R  S  G  L  R  W  I  W  N  R  S  I  T  K  P  N  A  H  S  C  R  T  C  E  N  S  T  S  V  A  T  E  K  H  P  G  *  Q  K  S  N  D  *  L  *  G  S  N  *  C  G  K  K  H  I  Q  T  R  R  M  E  G  N  L  S  R  I  N  N  Y  S  P  Q  R  C  T  S  S  R  P  I  F  L  D  I  R  V  C  K  R  A  T  S  S  R  M  S  *  E  W  S  R  E  L  *  N  N  A  Y  S  R  W  S  C  R  S  S  *  L  D  M  L  L  S  L  R  C  Y  *  N  P  I  P  G  S  V  T  I  Y  T  I  E  I  Y  W  H  C  *  L  F  Q  E  K  C  E  T  R  G  I  *  C  A  L  E  R  F  G  N  C  S  C  Q  S  I  C  S  E  W  G  Y  I  H  C  L  *  N  C </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C00HBa0081D06.1" strand="+"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="32845" stop="32943"/>
                    <exon start="35061" stop="35702"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>741</number_coding_nucleotides>
                  <number_encoded_amino_acids>247</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GSAFNILRRVAATEGPLALYRGMAAPLASVTFQNAMVFQIYAVLSRALDRNVPASDPPSYKGVALGGFGTGALQSLMLTPVELVKIRLQLQQRNILDNKNQMTSCKGPTDVARNIFRQEGWRGIYRGLTITVLRDAPAHGLYFWTYEYVREQLHPGCRKNGQESFRTMLIAGGLAGVASWICCYPLDVIKTRFQAQSQSTPLRYTGIVDCFRRSVKQEGYNVLWRGLGTAVARAFVVNGAIFTAYET</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="-" PGL_start="35964" PGL_stop="35644"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="35964" e_stop="35644"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.984"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.984">
            <gDNA_exon_boundary e_start="35964" e_stop="35644" e_length="321"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="35964" stop="35644"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U343272" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTGGAGTATACTACATAAATGAAAGTTACATTACACTATTTTAATCTTGGATGTTAAACCATGTCCACAGGAAGTGCAGTTGATACGAAAAGACTGATATTACATTTCAGCTTGAGGTATAAACCATACAATTGGTATAATGAATAATATAAAATGAGACAACACAGCTCAATGACTACTTACTCCTATATTAGAATGCATTTTCAGTTTGAATATTCGCGTGAACTTCTTTGTTGTTGTTGATGAAAAGGCACCTTAAGGCAGTTTCATAGGCAGTGAATATAGCCCCATTCACTACAAATGCTCTGGCAACTGCAGTTC</gDNA_template>
            <first_frame> L  E  Y  T  T  *  M  K  V  T  L  H  Y  F  N  L  G  C  *  T  M  S  T  G  S  A  V  D  T  K  R  L  I  L  H  F  S  L  R  Y  K  P  Y  N  W  Y  N  E  *  Y  K  M  R  Q  H  S  S  M  T  T  Y  S  Y  I  R  M  H  F  Q  F  E  Y  S  R  E  L  L  C  C  C  *  *  K  G  T  L  R  Q  F  H  R  Q  *  I  *  P  H  S  L  Q  M  L  W  Q  L  Q  F </first_frame>
            <second_frame>  W  S  I  L  H  K  *  K  L  H  Y  T  I  L  I  L  D  V  K  P  C  P  Q  E  V  Q  L  I  R  K  D  *  Y  Y  I  S  A  *  G  I  N  H  T  I  G  I  M  N  N  I  K  *  D  N  T  A  Q  *  L  L  T  P  I  L  E  C  I  F  S  L  N  I  R  V  N  F  F  V  V  V  D  E  K  A  P  *  G  S  F  I  G  S  E  Y  S  P  I  H  Y  K  C  S  G  N  C  S   </second_frame>
            <third_frame>   G  V  Y  Y  I  N  E  S  Y  I  T  L  F  *  S  W  M  L  N  H  V  H  R  K  C  S  *  Y  E  K  T  D  I  T  F  Q  L  E  V  *  T  I  Q  L  V  *  *  I  I  *  N  E  T  T  Q  L  N  D  Y  L  L  L  Y  *  N  A  F  S  V  *  I  F  A  *  T  S  L  L  L  L  M  K  R  H  L  K  A  V  S  *  A  V  N  I  A  P  F  T  T  N  A  L  A  T  A  V  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C00HBa0081D06.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="-" PGL_start="36842" PGL_stop="36236"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="36842" e_stop="36236"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="36842" e_stop="36236" e_length="607"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36842" stop="36236"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U341424" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AAGAATCAGTAAACAACACGAGGAAAGTACAGAAAGAAAAAATGGAAGATGCATTGCTTCGAAACACAAGTAAAGGTGAGGTATTAGTACAGAAGATGAAGGAACTAGAGATGATGGATGAGGAAGATTTGGATCAAATGATGGACATAAAAGAAGTTCTCTACTACTACTCTTACCTAAAATGTCCAGTTTACCTTGACATTGTTGACAGGTATTTCATGGACATGTATAATGAGTTATCACTTCCACAGACATTCATCAATGTCAACAGTTAAATGTTAAGTCTTGGTCACATTAAGCTCTAGAAACTACAGAGAAAATGTTTTTGCTTACTAATGAAAGTTTTCGAGCTTAGCTAACTTCTTTTGTCTGTTAATTGCCATGCCATGTACTTCTATATTGAAAAATTTCAGAAAACCTCATTAGATCTGAGTTAATTTCTCAGACGATCATTCAACTAGTAGTTATTACCTCAGAAAATTGGAATCAAGAAGTAAAGTGACTTTCAGAGTTGACATTTATTAATTGAATGACCATATGAGGAATCAACCCTATTCGATTTGTATTTCTTGAGCATGTTTCTTTACAATGTCAAATAAGTTATTTG</gDNA_template>
            <first_frame> K  N  Q  *  T  T  R  G  K  Y  R  K  K  K  W  K  M  H  C  F  E  T  Q  V  K  V  R  Y  *  Y  R  R  *  R  N  *  R  *  W  M  R  K  I  W  I  K  *  W  T  *  K  K  F  S  T  T  T  L  T  *  N  V  Q  F  T  L  T  L  L  T  G  I  S  W  T  C  I  M  S  Y  H  F  H  R  H  S  S  M  S  T  V  K  C  *  V  L  V  T  L  S  S  R  N  Y  R  E  N  V  F  A  Y  *  *  K  F  S  S  L  A  N  F  F  C  L  L  I  A  M  P  C  T  S  I  L  K  N  F  R  K  P  H  *  I  *  V  N  F  S  D  D  H  S  T  S  S  Y  Y  L  R  K  L  E  S  R  S  K  V  T  F  R  V  D  I  Y  *  L  N  D  H  M  R  N  Q  P  Y  S  I  C  I  S  *  A  C  F  F  T  M  S  N  K  L  F  </first_frame>
            <second_frame>  R  I  S  K  Q  H  E  E  S  T  E  R  K  N  G  R  C  I  A  S  K  H  K  *  R  *  G  I  S  T  E  D  E  G  T  R  D  D  G  *  G  R  F  G  S  N  D  G  H  K  R  S  S  L  L  L  L  L  P  K  M  S  S  L  P  *  H  C  *  Q  V  F  H  G  H  V  *  *  V  I  T  S  T  D  I  H  Q  C  Q  Q  L  N  V  K  S  W  S  H  *  A  L  E  T  T  E  K  M  F  L  L  T  N  E  S  F  R  A  *  L  T  S  F  V  C  *  L  P  C  H  V  L  L  Y  *  K  I  S  E  N  L  I  R  S  E  L  I  S  Q  T  I  I  Q  L  V  V  I  T  S  E  N  W  N  Q  E  V  K  *  L  S  E  L  T  F  I  N  *  M  T  I  *  G  I  N  P  I  R  F  V  F  L  E  H  V  S  L  Q  C  Q  I  S  Y  L </second_frame>
            <third_frame>   E  S  V  N  N  T  R  K  V  Q  K  E  K  M  E  D  A  L  L  R  N  T  S  K  G  E  V  L  V  Q  K  M  K  E  L  E  M  M  D  E  E  D  L  D  Q  M  M  D  I  K  E  V  L  Y  Y  Y  S  Y  L  K  C  P  V  Y  L  D  I  V  D  R  Y  F  M  D  M  Y  N  E  L  S  L  P  Q  T  F  I  N  V  N  S  *  M  L  S  L  G  H  I  K  L  *  K  L  Q  R  K  C  F  C  L  L  M  K  V  F  E  L  S  *  L  L  L  S  V  N  C  H  A  M  Y  F  Y  I  E  K  F  Q  K  T  S  L  D  L  S  *  F  L  R  R  S  F  N  *  *  L  L  P  Q  K  I  G  I  K  K  *  S  D  F  Q  S  *  H  L  L  I  E  *  P  Y  E  E  S  T  L  F  D  L  Y  F  L  S  M  F  L  Y  N  V  K  *  V  I   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C00HBa0081D06.1" strand="-"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="36840" stop="36568"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>270</number_coding_nucleotides>
                  <number_encoded_amino_acids>90</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ESVNNTRKVQKEKMEDALLRNTSKGEVLVQKMKELEMMDEEDLDQMMDIKEVLYYYSYLKCPVYLDIVDRYFMDMYNELSLPQTFINVNS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="+" PGL_start="44139" PGL_stop="48224"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="44139" e_stop="44223"/>
            <exon e_start="44472" e_stop="44607"/>
            <exon e_start="44722" e_stop="44823"/>
            <exon e_start="45963" e_stop="46201"/>
            <exon e_start="46508" e_stop="46528"/>
            <exon e_start="46655" e_stop="46724"/>
            <exon e_start="46889" e_stop="46912"/>
            <exon e_start="47101" e_stop="47123"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.994" e_score="0.988"/>
          <exon-intron don_prob="0.995" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.958" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.996"/>
          <exon-intron don_prob="0.000" acc_prob="0.745" e_score="0.667"/>
          <exon-intron don_prob="0.561" acc_prob="0.798" e_score="0.500"/>
          <exon-intron don_prob="0.000" acc_prob="0.866" e_score="0.542"/>
          <exon-only e_score="0.652"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.988">
            <gDNA_exon_boundary e_start="44139" e_stop="44223" e_length="85"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.994">
            <gDNA_intron_boundary i_start="44224" i_stop="44471" i_length="248"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="44472" e_stop="44607" e_length="136"/>
          </exon>
          <intron i_serial="2" don_prob="0.995" acc_prob="0.998">
            <gDNA_intron_boundary i_start="44608" i_stop="44721" i_length="114"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="44722" e_stop="44823" e_length="102"/>
          </exon>
          <intron i_serial="3" don_prob="0.999" acc_prob="0.958">
            <gDNA_intron_boundary i_start="44824" i_stop="45962" i_length="1139"/>
          </intron>
          <exon e_serial="4" e_score="0.996">
            <gDNA_exon_boundary e_start="45963" e_stop="46201" e_length="239"/>
          </exon>
          <intron i_serial="4" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="46202" i_stop="46507" i_length="306"/>
          </intron>
          <exon e_serial="5" e_score="0.667">
            <gDNA_exon_boundary e_start="46508" e_stop="46528" e_length="21"/>
          </exon>
          <intron i_serial="5" don_prob="0.000" acc_prob="0.745">
            <gDNA_intron_boundary i_start="46529" i_stop="46654" i_length="126"/>
          </intron>
          <exon e_serial="6" e_score="0.500">
            <gDNA_exon_boundary e_start="46655" e_stop="46724" e_length="70"/>
          </exon>
          <intron i_serial="6" don_prob="0.561" acc_prob="0.798">
            <gDNA_intron_boundary i_start="46725" i_stop="46888" i_length="164"/>
          </intron>
          <exon e_serial="7" e_score="0.542">
            <gDNA_exon_boundary e_start="46889" e_stop="46912" e_length="24"/>
          </exon>
          <intron i_serial="7" don_prob="0.000" acc_prob="0.866">
            <gDNA_intron_boundary i_start="46913" i_stop="47100" i_length="188"/>
          </intron>
          <exon e_serial="8" e_score="0.652">
            <gDNA_exon_boundary e_start="47101" e_stop="47123" e_length="23"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44139" stop="44223"/>
              <exon start="44472" stop="44607"/>
              <exon start="44722" stop="44823"/>
              <exon start="45963" stop="46201"/>
              <exon start="46508" stop="46528"/>
              <exon start="46655" stop="46724"/>
              <exon start="46889" stop="46912"/>
              <exon start="47101" stop="47123"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U313047" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TATAAGCACTGCCTAGATCGCCGCAGTTCTCAGTTGAGAAAGCTCAGGAGGAGGTCGCTAGGGTTTCTGCAACTGTAGCGTAATG : GGTAAGGGAACAGGAAGCTTCGGTAAGAGGAGGAACAAGACCCACACACTATGTGTGAGGTGTGGAAGACGGAGCTTCCATCTCCAGAAGAGCCGTTGCTCTGCTTGTGCTTACCCTGCTGCCCGTAAAAGGACAT : ACAACTGGAGTGTGAAGGCTATCCGCAGAAAGACAACTGGAACTGGCCGCATGAGGTATCTTCGTAACGTCCCTCGCAGGTTCAAGACCAATTTCAGAGAAG : GTACTGAAGCAGCTCCAAGGAAGAAGGGAGTAGCTTCTGCTTGAGGCCTTCGAGACAGTTACTTGAGAGGCTATTAGTGGTAGCTTCATTTTGATATTTCAAGTGTTAGAGCAAGTAAAATTTTGGGACCTTCTATCTTAGTTTTTATTGCCCTTTGAAAGATTAATGTGCTTAAAATTTTAAAAGTATGTGTTCCAACTTGGCATTTTTATAAAGAACGGATCTTGAGACTTCCATAA : GAAACAATGCAAAGAAAAACA : GAAAATGAAGTTATAGCGATGTGTTTTTTTTTGGAGTTGTAGGTTAACTGAACTAACTTTAGGCTACAAG : ATGGTGTTGAGGGCATCGAATTGG : GCCGCCTTGAGCGATGCAACGTA</gDNA_template>
            <first_frame> Y  K  H  C  L  D  R  R  S  S  Q  L  R  K  L  R  R  R  S  L  G  F  L  Q  L  *  R  N   : G  *  G  N  R  K  L  R  *  E  E  E  Q  D  P  H  T  M  C  E  V  W  K  T  E  L  P  S  P  E  E  P  L  L  C  L  C  L  P  C  C  P  *  K  D  I :   Q  L  E  C  E  G  Y  P  Q  K  D  N  W  N  W  P  H  E  V  S  S  *  R  P  S  Q  V  Q  D  Q  F  Q  R  R :   Y  *  S  S  S  K  E  E  G  S  S  F  C  L  R  P  S  R  Q  L  L  E  R  L  L  V  V  A  S  F  *  Y  F  K  C  *  S  K  *  N  F  G  T  F  Y  L  S  F  Y  C  P  L  K  D  *  C  A  *  N  F  K  S  M  C  S  N  L  A  F  L  *  R  T  D  L  E  T  S  I   : R  N  N  A  K  K  N   : R  K  *  S  Y  S  D  V  F  F  F  G  V  V  G  *  L  N  *  L  *  A  T  R :   W  C  *  G  H  R  I  G :   P  P  *  A  M  Q  R  </first_frame>
            <second_frame>  I  S  T  A  *  I  A  A  V  L  S  *  E  S  S  G  G  G  R  *  G  F  C  N  C  S  V  M  :  G  K  G  T  G  S  F  G  K  R  R  N  K  T  H  T  L  C  V  R  C  G  R  R  S  F  H  L  Q  K  S  R  C  S  A  C  A  Y  P  A  A  R  K  R  T   : Y  N  W  S  V  K  A  I  R  R  K  T  T  G  T  G  R  M  R  Y  L  R  N  V  P  R  R  F  K  T  N  F  R  E   : G  T  E  A  A  P  R  K  K  G  V  A  S  A  *  G  L  R  D  S  Y  L  R  G  Y  *  W  *  L  H  F  D  I  S  S  V  R  A  S  K  I  L  G  P  S  I  L  V  F  I  A  L  *  K  I  N  V  L  K  I  L  K  V  C  V  P  T  W  H  F  Y  K  E  R  I  L  R  L  P  *  :  E  T  M  Q  R  K  T  :  E  N  E  V  I  A  M  C  F  F  L  E  L  *  V  N  *  T  N  F  R  L  Q   : D  G  V  E  G  I  E  L   : G  R  L  E  R  C  N  V </second_frame>
            <third_frame>   *  A  L  P  R  S  P  Q  F  S  V  E  K  A  Q  E  E  V  A  R  V  S  A  T  V  A  *  W :   V  R  E  Q  E  A  S  V  R  G  G  T  R  P  T  H  Y  V  *  G  V  E  D  G  A  S  I  S  R  R  A  V  A  L  L  V  L  T  L  L  P  V  K  G  H  :  T  T  G  V  *  R  L  S  A  E  R  Q  L  E  L  A  A  *  G  I  F  V  T  S  L  A  G  S  R  P  I  S  E  K  :  V  L  K  Q  L  Q  G  R  R  E  *  L  L  L  E  A  F  E  T  V  T  *  E  A  I  S  G  S  F  I  L  I  F  Q  V  L  E  Q  V  K  F  W  D  L  L  S  *  F  L  L  P  F  E  R  L  M  C  L  K  F  *  K  Y  V  F  Q  L  G  I  F  I  K  N  G  S  *  D  F  H  K :   K  Q  C  K  E  K  Q :   K  M  K  L  *  R  C  V  F  F  W  S  C  R  L  T  E  L  T  L  G  Y  K  :  M  V  L  R  A  S  N  W  :  A  A  L  S  D  A  T   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C00HBa0081D06.1" strand="+"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="44200" stop="44223"/>
                    <exon start="44472" stop="44607"/>
                    <exon start="44722" stop="44823"/>
                    <exon start="45963" stop="46006"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>303</number_coding_nucleotides>
                  <number_encoded_amino_acids>101</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GFCNCSVMGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAYPAARKRTYNWSVKAIRRKTTGTGRMRYLRNVPRRFKTNFREGTEAAPRKKGVASA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="44211" e_stop="44223"/>
            <exon e_start="44472" e_stop="44607"/>
            <exon e_start="44722" e_stop="45182"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.998" e_score="1.000"/>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="44211" e_stop="44223" e_length="13"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.994">
            <gDNA_intron_boundary i_start="44224" i_stop="44471" i_length="248"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="44472" e_stop="44607" e_length="136"/>
          </exon>
          <intron i_serial="2" don_prob="0.995" acc_prob="0.998">
            <gDNA_intron_boundary i_start="44608" i_stop="44721" i_length="114"/>
          </intron>
          <exon e_serial="3" e_score="0.998">
            <gDNA_exon_boundary e_start="44722" e_stop="45182" e_length="461"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44211" stop="44223"/>
              <exon start="44472" stop="44607"/>
              <exon start="44722" stop="45182"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U313042" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CTGTAGCGTAATG : GGTAAGGGAACAGGAAGCTTCGGTAAGAGGAGGAACAAGACCCACACACTATGTGTGAGGTGTGGAAGACGGAGCTTCCATCTCCAGAAGAGCCGTTGCTCTGCTTGTGCTTACCCTGCTGCCCGTAAAAGGACAT : ACAACTGGAGTGTGAAGGCTATCCGCAGAAAGACAACTGGAACTGGCCGCATGAGGTATCTTCGTAACGTCCCTCGCAGGTTCAAGACCAATTTCAGAGAAGGTACACATATTATAGTGTTTCTGCATTTTAAGATTTGCTAATTTACTTTTTATTTAGGATTGAGTGTGCCTTTGGTATGGATAACATTGTTTATAGAATTTATGAAATCATTTTCGAGTGATTGCTTACTTCTAAAATGGGAAACCTTATTTCCTCTAGTTATAGACAAAAGTCATTTTACTTTACAGATATCCCATATACTTGCCTAGACAAATATTTAGATATTGTTTTCAACCTTCATTGCTAATATGACTACTACCTCTTTCTCATCTGTTAAGTTGTTCAACTGGGCACAATGTTTAAGAAGTTTAAAAAATAATGTGTTTTTAAAGATAGAAAGTTGTCGATTCCTTTCCTTT</gDNA_template>
            <first_frame> L  *  R  N   : G  *  G  N  R  K  L  R  *  E  E  E  Q  D  P  H  T  M  C  E  V  W  K  T  E  L  P  S  P  E  E  P  L  L  C  L  C  L  P  C  C  P  *  K  D  I :   Q  L  E  C  E  G  Y  P  Q  K  D  N  W  N  W  P  H  E  V  S  S  *  R  P  S  Q  V  Q  D  Q  F  Q  R  R  Y  T  Y  Y  S  V  S  A  F  *  D  L  L  I  Y  F  L  F  R  I  E  C  A  F  G  M  D  N  I  V  Y  R  I  Y  E  I  I  F  E  *  L  L  T  S  K  M  G  N  L  I  S  S  S  Y  R  Q  K  S  F  Y  F  T  D  I  P  Y  T  C  L  D  K  Y  L  D  I  V  F  N  L  H  C  *  Y  D  Y  Y  L  F  L  I  C  *  V  V  Q  L  G  T  M  F  K  K  F  K  K  *  C  V  F  K  D  R  K  L  S  I  P  F  L  </first_frame>
            <second_frame>  C  S  V  M  :  G  K  G  T  G  S  F  G  K  R  R  N  K  T  H  T  L  C  V  R  C  G  R  R  S  F  H  L  Q  K  S  R  C  S  A  C  A  Y  P  A  A  R  K  R  T   : Y  N  W  S  V  K  A  I  R  R  K  T  T  G  T  G  R  M  R  Y  L  R  N  V  P  R  R  F  K  T  N  F  R  E  G  T  H  I  I  V  F  L  H  F  K  I  C  *  F  T  F  Y  L  G  L  S  V  P  L  V  W  I  T  L  F  I  E  F  M  K  S  F  S  S  D  C  L  L  L  K  W  E  T  L  F  P  L  V  I  D  K  S  H  F  T  L  Q  I  S  H  I  L  A  *  T  N  I  *  I  L  F  S  T  F  I  A  N  M  T  T  T  S  F  S  S  V  K  L  F  N  W  A  Q  C  L  R  S  L  K  N  N  V  F  L  K  I  E  S  C  R  F  L  S  F </second_frame>
            <third_frame>   V  A  *  W :   V  R  E  Q  E  A  S  V  R  G  G  T  R  P  T  H  Y  V  *  G  V  E  D  G  A  S  I  S  R  R  A  V  A  L  L  V  L  T  L  L  P  V  K  G  H  :  T  T  G  V  *  R  L  S  A  E  R  Q  L  E  L  A  A  *  G  I  F  V  T  S  L  A  G  S  R  P  I  S  E  K  V  H  I  L  *  C  F  C  I  L  R  F  A  N  L  L  F  I  *  D  *  V  C  L  W  Y  G  *  H  C  L  *  N  L  *  N  H  F  R  V  I  A  Y  F  *  N  G  K  P  Y  F  L  *  L  *  T  K  V  I  L  L  Y  R  Y  P  I  Y  L  P  R  Q  I  F  R  Y  C  F  Q  P  S  L  L  I  *  L  L  P  L  S  H  L  L  S  C  S  T  G  H  N  V  *  E  V  *  K  I  M  C  F  *  R  *  K  V  V  D  S  F  P   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C00HBa0081D06.1" strand="+"/>
                <serials PGL_serial="6" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="44212" stop="44223"/>
                    <exon start="44472" stop="44607"/>
                    <exon start="44722" stop="44864"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>288</number_coding_nucleotides>
                  <number_encoded_amino_acids>96</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>CSVMGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAYPAARKRTYNWSVKAIRRKTTGTGRMRYLRNVPRRFKTNFREGTHIIVFLHFKIC*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="44186" e_stop="44223"/>
            <exon e_start="44472" e_stop="44607"/>
            <exon e_start="44722" e_stop="44823"/>
            <exon e_start="45963" e_stop="46214"/>
            <exon e_start="46606" e_stop="46618"/>
            <exon e_start="46697" e_stop="46724"/>
            <exon e_start="46889" e_stop="46943"/>
            <exon e_start="47101" e_stop="47120"/>
            <exon e_start="47392" e_stop="47404"/>
            <exon e_start="47476" e_stop="47486"/>
            <exon e_start="47833" e_stop="47880"/>
            <exon e_start="48194" e_stop="48224"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.994" e_score="0.974"/>
          <exon-intron don_prob="0.995" acc_prob="0.998" e_score="0.993"/>
          <exon-intron don_prob="0.999" acc_prob="0.958" e_score="0.990"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.972"/>
          <exon-intron don_prob="0.900" acc_prob="0.688" e_score="0.692"/>
          <exon-intron don_prob="0.561" acc_prob="0.798" e_score="0.393"/>
          <exon-intron don_prob="0.000" acc_prob="0.866" e_score="0.545"/>
          <exon-intron don_prob="0.535" acc_prob="0.000" e_score="0.550"/>
          <exon-intron don_prob="0.900" acc_prob="0.000" e_score="0.769"/>
          <exon-intron don_prob="0.900" acc_prob="0.594" e_score="0.636"/>
          <exon-intron don_prob="0.997" acc_prob="0.000" e_score="0.438"/>
          <exon-only e_score="0.742"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.974">
            <gDNA_exon_boundary e_start="44186" e_stop="44223" e_length="38"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.994">
            <gDNA_intron_boundary i_start="44224" i_stop="44471" i_length="248"/>
          </intron>
          <exon e_serial="2" e_score="0.993">
            <gDNA_exon_boundary e_start="44472" e_stop="44607" e_length="136"/>
          </exon>
          <intron i_serial="2" don_prob="0.995" acc_prob="0.998">
            <gDNA_intron_boundary i_start="44608" i_stop="44721" i_length="114"/>
          </intron>
          <exon e_serial="3" e_score="0.990">
            <gDNA_exon_boundary e_start="44722" e_stop="44823" e_length="102"/>
          </exon>
          <intron i_serial="3" don_prob="0.999" acc_prob="0.958">
            <gDNA_intron_boundary i_start="44824" i_stop="45962" i_length="1139"/>
          </intron>
          <exon e_serial="4" e_score="0.972">
            <gDNA_exon_boundary e_start="45963" e_stop="46214" e_length="252"/>
          </exon>
          <intron i_serial="4" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="46215" i_stop="46605" i_length="391"/>
          </intron>
          <exon e_serial="5" e_score="0.692">
            <gDNA_exon_boundary e_start="46606" e_stop="46618" e_length="13"/>
          </exon>
          <intron i_serial="5" don_prob="0.900" acc_prob="0.688">
            <gDNA_intron_boundary i_start="46619" i_stop="46696" i_length="78"/>
          </intron>
          <exon e_serial="6" e_score="0.393">
            <gDNA_exon_boundary e_start="46697" e_stop="46724" e_length="28"/>
          </exon>
          <intron i_serial="6" don_prob="0.561" acc_prob="0.798">
            <gDNA_intron_boundary i_start="46725" i_stop="46888" i_length="164"/>
          </intron>
          <exon e_serial="7" e_score="0.545">
            <gDNA_exon_boundary e_start="46889" e_stop="46943" e_length="55"/>
          </exon>
          <intron i_serial="7" don_prob="0.000" acc_prob="0.866">
            <gDNA_intron_boundary i_start="46944" i_stop="47100" i_length="157"/>
          </intron>
          <exon e_serial="8" e_score="0.550">
            <gDNA_exon_boundary e_start="47101" e_stop="47120" e_length="20"/>
          </exon>
          <intron i_serial="8" don_prob="0.535" acc_prob="0.000">
            <gDNA_intron_boundary i_start="47121" i_stop="47391" i_length="271"/>
          </intron>
          <exon e_serial="9" e_score="0.769">
            <gDNA_exon_boundary e_start="47392" e_stop="47404" e_length="13"/>
          </exon>
          <intron i_serial="9" don_prob="0.900" acc_prob="0.000">
            <gDNA_intron_boundary i_start="47405" i_stop="47475" i_length="71"/>
          </intron>
          <exon e_serial="10" e_score="0.636">
            <gDNA_exon_boundary e_start="47476" e_stop="47486" e_length="11"/>
          </exon>
          <intron i_serial="10" don_prob="0.900" acc_prob="0.594">
            <gDNA_intron_boundary i_start="47487" i_stop="47832" i_length="346"/>
          </intron>
          <exon e_serial="11" e_score="0.438">
            <gDNA_exon_boundary e_start="47833" e_stop="47880" e_length="48"/>
          </exon>
          <intron i_serial="11" don_prob="0.997" acc_prob="0.000">
            <gDNA_intron_boundary i_start="47881" i_stop="48193" i_length="313"/>
          </intron>
          <exon e_serial="12" e_score="0.742">
            <gDNA_exon_boundary e_start="48194" e_stop="48224" e_length="31"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44186" stop="44223"/>
              <exon start="44472" stop="44607"/>
              <exon start="44722" stop="44823"/>
              <exon start="45963" stop="46214"/>
              <exon start="46606" stop="46618"/>
              <exon start="46697" stop="46724"/>
              <exon start="46889" stop="46943"/>
              <exon start="47101" stop="47120"/>
              <exon start="47392" stop="47404"/>
              <exon start="47476" stop="47486"/>
              <exon start="47833" stop="47880"/>
              <exon start="48194" stop="48224"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U334089" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="3" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GAGGAGGTCGCTAGGGTTTCTGCAACTGTAGCGTAATG : GGTAAGGGAACAGGAAGCTTCGGTAAGAGGAGGAACAAGACCCACACACTATGTGTGAGGTGTGGAAGACGGAGCTTCCATCTCCAGAAGAGCCGTTGCTCTGCTTGTGCTTACCCTGCTGCCCGTAAAAGGACAT : ACAACTGGAGTGTGAAGGCTATCCGCAGAAAGACAACTGGAACTGGCCGCATGAGGTATCTTCGTAACGTCCCTCGCAGGTTCAAGACCAATTTCAGAGAAG : GTACTGAAGCAGCTCCAAGGAAGAAGGGAGTAGCTTCTGCTTGAGGCCTTCGAGACAGTTACTTGAGAGGCTATTAGTGGTAGCTTCATTTTGATATTTCAAGTGTTAGAGCAAGTAAAATTTTGGGACCTTCTATCTTAGTTTTTATTGCCCTTTGAAAGATTAATGTGCTTAAAATTTTAAAAGTATGTGTTCCAACTTGGCATTTTTATAAAGAACGGATCTTGAGACTTCCATAACTTGTTGGATCTG : TCTCTCTGATCTT : GTTAACTGAACTAACTTTAGGCTACAAG : ATGGTGTTGAGGGCATCGAATTGGGTTGAAGGTAAGGCGTCTAAAATTTCAAATA : GCCGCCTTGAGCGATGCAAC : ATACTATTACTGG : TTATACTGATC : TCAAAGCAAGAGGCCAGTCCTGTTTCTATCATTCTTCAAAACAAACAT : TTCTTCCCTTTTTAGAAAAATCACAAAAAAA</gDNA_template>
            <first_frame> E  E  V  A  R  V  S  A  T  V  A  *  W :   V  R  E  Q  E  A  S  V  R  G  G  T  R  P  T  H  Y  V  *  G  V  E  D  G  A  S  I  S  R  R  A  V  A  L  L  V  L  T  L  L  P  V  K  G  H  :  T  T  G  V  *  R  L  S  A  E  R  Q  L  E  L  A  A  *  G  I  F  V  T  S  L  A  G  S  R  P  I  S  E  K  :  V  L  K  Q  L  Q  G  R  R  E  *  L  L  L  E  A  F  E  T  V  T  *  E  A  I  S  G  S  F  I  L  I  F  Q  V  L  E  Q  V  K  F  W  D  L  L  S  *  F  L  L  P  F  E  R  L  M  C  L  K  F  *  K  Y  V  F  Q  L  G  I  F  I  K  N  G  S  *  D  F  H  N  L  L  D  L  :  S  L  *  S   : C  *  L  N  *  L  *  A  T  R :   W  C  *  G  H  R  I  G  L  K  V  R  R  L  K  F  Q  I  :  A  A  L  S  D  A  T :   Y  Y  Y  W  :  L  Y  *  S :   Q  S  K  R  P  V  L  F  L  S  F  F  K  T  N  I :   S  S  L  F  R  K  I  T  K  K </first_frame>
            <second_frame>  R  R  S  L  G  F  L  Q  L  *  R  N   : G  *  G  N  R  K  L  R  *  E  E  E  Q  D  P  H  T  M  C  E  V  W  K  T  E  L  P  S  P  E  E  P  L  L  C  L  C  L  P  C  C  P  *  K  D  I :   Q  L  E  C  E  G  Y  P  Q  K  D  N  W  N  W  P  H  E  V  S  S  *  R  P  S  Q  V  Q  D  Q  F  Q  R  R :   Y  *  S  S  S  K  E  E  G  S  S  F  C  L  R  P  S  R  Q  L  L  E  R  L  L  V  V  A  S  F  *  Y  F  K  C  *  S  K  *  N  F  G  T  F  Y  L  S  F  Y  C  P  L  K  D  *  C  A  *  N  F  K  S  M  C  S  N  L  A  F  L  *  R  T  D  L  E  T  S  I  T  C  W  I  C :   L  S  D  L  :  V  N  *  T  N  F  R  L  Q   : D  G  V  E  G  I  E  L  G  *  R  *  G  V  *  N  F  K  * :   P  P  *  A  M  Q   : H  T  I  T  G :   Y  T  D   : L  K  A  R  G  Q  S  C  F  Y  H  S  S  K  Q  T   : F  L  P  F  L  E  K  S  Q  K   </second_frame>
            <third_frame>   G  G  R  *  G  F  C  N  C  S  V  M  :  G  K  G  T  G  S  F  G  K  R  R  N  K  T  H  T  L  C  V  R  C  G  R  R  S  F  H  L  Q  K  S  R  C  S  A  C  A  Y  P  A  A  R  K  R  T   : Y  N  W  S  V  K  A  I  R  R  K  T  T  G  T  G  R  M  R  Y  L  R  N  V  P  R  R  F  K  T  N  F  R  E   : G  T  E  A  A  P  R  K  K  G  V  A  S  A  *  G  L  R  D  S  Y  L  R  G  Y  *  W  *  L  H  F  D  I  S  S  V  R  A  S  K  I  L  G  P  S  I  L  V  F  I  A  L  *  K  I  N  V  L  K  I  L  K  V  C  V  P  T  W  H  F  Y  K  E  R  I  L  R  L  P  *  L  V  G  S   : V  S  L  I  L :   L  T  E  L  T  L  G  Y  K  :  M  V  L  R  A  S  N  W  V  E  G  K  A  S  K  I  S  N   : S  R  L  E  R  C  N  :  I  L  L  L   : V  I  L  I  :  S  K  Q  E  A  S  P  V  S  I  I  L  Q  N  K  H  :  F  F  P  F  *  K  N  H  K  K  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C00HBa0081D06.1" strand="+"/>
                <serials PGL_serial="6" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="44200" stop="44223"/>
                    <exon start="44472" stop="44607"/>
                    <exon start="44722" stop="44823"/>
                    <exon start="45963" stop="46006"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>303</number_coding_nucleotides>
                  <number_encoded_amino_acids>101</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GFCNCSVMGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAYPAARKRTYNWSVKAIRRKTTGTGRMRYLRNVPRRFKTNFREGTEAAPRKKGVASA*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C00HBa0081D06.1" strand="+"/>
                <serials PGL_serial="6" AGS_serial="3" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="46202" stop="46214"/>
                    <exon start="46606" stop="46618"/>
                    <exon start="46697" stop="46724"/>
                    <exon start="46889" stop="46943"/>
                    <exon start="47101" stop="47120"/>
                    <exon start="47392" stop="47404"/>
                    <exon start="47476" stop="47486"/>
                    <exon start="47833" stop="47880"/>
                    <exon start="48194" stop="48208"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>213</number_coding_nucleotides>
                  <number_encoded_amino_acids>71</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LVGSVSLILLTELTLGYKMVLRASNWVEGKASKISNSRLERCNILLLVILISKQEASPVSIILQNKHFFPF*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="-" PGL_start="52548" PGL_stop="51291"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="52548" e_stop="52388"/>
            <exon e_start="51902" e_stop="51776"/>
            <exon e_start="51595" e_stop="51291"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.970" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.973" acc_prob="0.956" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="52548" e_stop="52388" e_length="161"/>
          </exon>
          <intron i_serial="1" don_prob="0.970" acc_prob="0.994">
            <gDNA_intron_boundary i_start="52387" i_stop="51903" i_length="485"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="51902" e_stop="51776" e_length="127"/>
          </exon>
          <intron i_serial="2" don_prob="0.973" acc_prob="0.956">
            <gDNA_intron_boundary i_start="51775" i_stop="51596" i_length="180"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="51595" e_stop="51291" e_length="305"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52548" stop="52388"/>
              <exon start="51902" stop="51776"/>
              <exon start="51595" stop="51291"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U312347" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TAATTTCCTAGTCTGAAGCAGAGCCCAATAATGGCGTCTATGGCAACTCTTACTGCAGTAAAGCCCACCAGTAGTGTCAAGGGCCTAGCTGGAAGCTCCATTGCTGGAACTAAGCTGAATGTTAAATCATCTCGCCTCAATGTGAAGCAATCTAAATCCAG : GGCTGGTGCTGTGGTTGCAAAATATGGTGACAAGAGTGTATATTTTGACTTGGAGGATTTGGGCAACACAACTGGTCAGTGGGACTTGTATGGATCAGATGCTCCTTCACCTTACAACTCCCTTCAG : AGCAAGTTCTTTGAGACATTTGCTGCTCCTTTCACAAAGAGAGGTCTGTTGCTCAAGTTCTTGATATTGGGAGGTGGCTCAACTCTTGCTTACTTCAGTTCAACTGCATCAGGAGATATCCTACCAATCAAGAAAGGCCCCCAACTTCCACCAAAGCTCGGTCCACGTGGCAAGATCTAATTGCTTCCCAATCAAAATTTCTTTACCTTCATTTTGTTATTGATGTATCATCTATATAACAGCTTGTAAGTGTACATTAAAGCTTACCTCAGACCTCTGTTACAACAAGATAAATCTTCTGGAAA</gDNA_template>
            <first_frame> *  F  P  S  L  K  Q  S  P  I  M  A  S  M  A  T  L  T  A  V  K  P  T  S  S  V  K  G  L  A  G  S  S  I  A  G  T  K  L  N  V  K  S  S  R  L  N  V  K  Q  S  K  S  R :   A  G  A  V  V  A  K  Y  G  D  K  S  V  Y  F  D  L  E  D  L  G  N  T  T  G  Q  W  D  L  Y  G  S  D  A  P  S  P  Y  N  S  L  Q  :  S  K  F  F  E  T  F  A  A  P  F  T  K  R  G  L  L  L  K  F  L  I  L  G  G  G  S  T  L  A  Y  F  S  S  T  A  S  G  D  I  L  P  I  K  K  G  P  Q  L  P  P  K  L  G  P  R  G  K  I  *  L  L  P  N  Q  N  F  F  T  F  I  L  L  L  M  Y  H  L  Y  N  S  L  *  V  Y  I  K  A  Y  L  R  P  L  L  Q  Q  D  K  S  S  G   </first_frame>
            <second_frame>  N  F  L  V  *  S  R  A  Q  *  W  R  L  W  Q  L  L  L  Q  *  S  P  P  V  V  S  R  A  *  L  E  A  P  L  L  E  L  S  *  M  L  N  H  L  A  S  M  *  S  N  L  N  P   : G  L  V  L  W  L  Q  N  M  V  T  R  V  Y  I  L  T  W  R  I  W  A  T  Q  L  V  S  G  T  C  M  D  Q  M  L  L  H  L  T  T  P  F  R :   A  S  S  L  R  H  L  L  L  L  S  Q  R  E  V  C  C  S  S  S  *  Y  W  E  V  A  Q  L  L  L  T  S  V  Q  L  H  Q  E  I  S  Y  Q  S  R  K  A  P  N  F  H  Q  S  S  V  H  V  A  R  S  N  C  F  P  I  K  I  S  L  P  S  F  C  Y  *  C  I  I  Y  I  T  A  C  K  C  T  L  K  L  T  S  D  L  C  Y  N  K  I  N  L  L  E  </second_frame>
            <third_frame>   I  S  *  S  E  A  E  P  N  N  G  V  Y  G  N  S  Y  C  S  K  A  H  Q  *  C  Q  G  P  S  W  K  L  H  C  W  N  *  A  E  C  *  I  I  S  P  Q  C  E  A  I  *  I  Q  :  G  W  C  C  G  C  K  I  W  *  Q  E  C  I  F  *  L  G  G  F  G  Q  H  N  W  S  V  G  L  V  W  I  R  C  S  F  T  L  Q  L  P  S   : E  Q  V  L  *  D  I  C  C  S  F  H  K  E  R  S  V  A  Q  V  L  D  I  G  R  W  L  N  S  C  L  L  Q  F  N  C  I  R  R  Y  P  T  N  Q  E  R  P  P  T  S  T  K  A  R  S  T  W  Q  D  L  I  A  S  Q  S  K  F  L  Y  L  H  F  V  I  D  V  S  S  I  *  Q  L  V  S  V  H  *  S  L  P  Q  T  S  V  T  T  R  *  I  F  W  K </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C00HBa0081D06.1" strand="-"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="52545" stop="52388"/>
                    <exon start="51902" stop="51776"/>
                    <exon start="51595" stop="51416"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>462</number_coding_nucleotides>
                  <number_encoded_amino_acids>154</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FPSLKQSPIMASMATLTAVKPTSSVKGLAGSSIAGTKLNVKSSRLNVKQSKSRAGAVVAKYGDKSVYFDLEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILGGGSTLAYFSSTASGDILPIKKGPQLPPKLGPRGKI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="+" PGL_start="61452" PGL_stop="64325"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="61452" e_stop="62274"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="61452" e_stop="62274" e_length="823"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61452" stop="62063"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U318517" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61654" stop="62274"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U336545" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GCCGGTCTTCTGATTCCCACATTCGGCTTTTGCTCTTATTATTGTTGTGGCGTATGTGGCTGCGTGTTCTTCACTGCCCAATCTGCTCCCAATAGCTTCAACTTTCTATATCCTCCATCACTGCTTAATTGTTGTTTCCATTTGACAAAATACAAAGTTCAAATTCTCAGATGGCTTCAATCGTAGTAGCTAAGCTGCATCCTCCTCCGCCCGCCATCACGGGCAGACAAACCCTTTTCGGAACTGTTAACACTTCTACACTTTTCGTCCCCACCAGTAAGTTTTCTTCTGCAACATTCACAATAACAGTTTCAGTCTGCAATTAGTCTTATTGAGGTATAATTTTGAGGTATTGTGTTGCAATTTCATAGGTGAAAATCCGATCAGTAGTAATACCGGGCTTGTAACATCGATGATGCTACTTTTCACTAGTTTTTTTTTTTAAATGACTGTAGTGTCTGGGCCTCGATTAAATTACCTGTTGTTTTTGCTACATTTCACTAGATAGTTTAAAGACTAGTATGGATGTTTCTCGTTATGTAGTGTGTTTAGTCCATAGAGAGGACTTAACAAGAAGAGTTGGAGATACTCAATGAACATTCATCATTTACTAGCAAAAGAAATGTTTCTATTCCGTATTTGTTACTATAGATAGAAAGTAAATGAGCCTGTGAGCGAGGCTATCCTGAATTTGTTATTGACTTTTGGCTACTATGGAATGGAGGTGGATGAACCTGTAAATAGAACATTCATGAAGGTTCGTTTGATATGCGGTTACAGAACAATTAATACTGCTAAACCAGGTAAAATTGACTTTGAAAGC</gDNA_template>
            <first_frame> A  G  L  L  I  P  T  F  G  F  C  S  Y  Y  C  C  G  V  C  G  C  V  F  F  T  A  Q  S  A  P  N  S  F  N  F  L  Y  P  P  S  L  L  N  C  C  F  H  L  T  K  Y  K  V  Q  I  L  R  W  L  Q  S  *  *  L  S  C  I  L  L  R  P  P  S  R  A  D  K  P  F  S  E  L  L  T  L  L  H  F  S  S  P  P  V  S  F  L  L  Q  H  S  Q  *  Q  F  Q  S  A  I  S  L  I  E  V  *  F  *  G  I  V  L  Q  F  H  R  *  K  S  D  Q  *  *  Y  R  A  C  N  I  D  D  A  T  F  H  *  F  F  F  L  N  D  C  S  V  W  A  S  I  K  L  P  V  V  F  A  T  F  H  *  I  V  *  R  L  V  W  M  F  L  V  M  *  C  V  *  S  I  E  R  T  *  Q  E  E  L  E  I  L  N  E  H  S  S  F  T  S  K  R  N  V  S  I  P  Y  L  L  L  *  I  E  S  K  *  A  C  E  R  G  Y  P  E  F  V  I  D  F  W  L  L  W  N  G  G  G  *  T  C  K  *  N  I  H  E  G  S  F  D  M  R  L  Q  N  N  *  Y  C  *  T  R  *  N  *  L  *  K  </first_frame>
            <second_frame>  P  V  F  *  F  P  H  S  A  F  A  L  I  I  V  V  A  Y  V  A  A  C  S  S  L  P  N  L  L  P  I  A  S  T  F  Y  I  L  H  H  C  L  I  V  V  S  I  *  Q  N  T  K  F  K  F  S  D  G  F  N  R  S  S  *  A  A  S  S  S  A  R  H  H  G  Q  T  N  P  F  R  N  C  *  H  F  Y  T  F  R  P  H  Q  *  V  F  F  C  N  I  H  N  N  S  F  S  L  Q  L  V  L  L  R  Y  N  F  E  V  L  C  C  N  F  I  G  E  N  P  I  S  S  N  T  G  L  V  T  S  M  M  L  L  F  T  S  F  F  F  *  M  T  V  V  S  G  P  R  L  N  Y  L  L  F  L  L  H  F  T  R  *  F  K  D  *  Y  G  C  F  S  L  C  S  V  F  S  P  *  R  G  L  N  K  K  S  W  R  Y  S  M  N  I  H  H  L  L  A  K  E  M  F  L  F  R  I  C  Y  Y  R  *  K  V  N  E  P  V  S  E  A  I  L  N  L  L  L  T  F  G  Y  Y  G  M  E  V  D  E  P  V  N  R  T  F  M  K  V  R  L  I  C  G  Y  R  T  I  N  T  A  K  P  G  K  I  D  F  E  S </second_frame>
            <third_frame>   R  S  S  D  S  H  I  R  L  L  L  L  L  L  L  W  R  M  W  L  R  V  L  H  C  P  I  C  S  Q  *  L  Q  L  S  I  S  S  I  T  A  *  L  L  F  P  F  D  K  I  Q  S  S  N  S  Q  M  A  S  I  V  V  A  K  L  H  P  P  P  P  A  I  T  G  R  Q  T  L  F  G  T  V  N  T  S  T  L  F  V  P  T  S  K  F  S  S  A  T  F  T  I  T  V  S  V  C  N  *  S  Y  *  G  I  I  L  R  Y  C  V  A  I  S  *  V  K  I  R  S  V  V  I  P  G  L  *  H  R  *  C  Y  F  S  L  V  F  F  F  K  *  L  *  C  L  G  L  D  *  I  T  C  C  F  C  Y  I  S  L  D  S  L  K  T  S  M  D  V  S  R  Y  V  V  C  L  V  H  R  E  D  L  T  R  R  V  G  D  T  Q  *  T  F  I  I  Y  *  Q  K  K  C  F  Y  S  V  F  V  T  I  D  R  K  *  M  S  L  *  A  R  L  S  *  I  C  Y  *  L  L  A  T  M  E  W  R  W  M  N  L  *  I  E  H  S  *  R  F  V  *  Y  A  V  T  E  Q  L  I  L  L  N  Q  V  K  L  T  L  K   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C00HBa0081D06.1" strand="+"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="61580" stop="61777"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>195</number_coding_nucleotides>
                  <number_encoded_amino_acids>65</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LLFPFDKIQSSNSQMASIVVAKLHPPPPAITGRQTLFGTVNTSTLFVPTSKFSSATFTITVSVCN*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="61508" e_stop="61727"/>
            <exon e_start="62449" e_stop="62543"/>
            <exon e_start="62907" e_stop="62993"/>
            <exon e_start="63354" e_stop="63416"/>
            <exon e_start="63584" e_stop="63621"/>
            <exon e_start="63928" e_stop="64325"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.982" e_score="1.000"/>
          <exon-intron don_prob="0.204" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.964" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.935" acc_prob="0.966" e_score="1.000"/>
          <exon-intron don_prob="0.982" acc_prob="0.930" e_score="1.000"/>
          <exon-only e_score="0.982"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="61508" e_stop="61727" e_length="220"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.982">
            <gDNA_intron_boundary i_start="61728" i_stop="62448" i_length="721"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="62449" e_stop="62543" e_length="95"/>
          </exon>
          <intron i_serial="2" don_prob="0.204" acc_prob="1.000">
            <gDNA_intron_boundary i_start="62544" i_stop="62906" i_length="363"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="62907" e_stop="62993" e_length="87"/>
          </exon>
          <intron i_serial="3" don_prob="0.964" acc_prob="0.997">
            <gDNA_intron_boundary i_start="62994" i_stop="63353" i_length="360"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="63354" e_stop="63416" e_length="63"/>
          </exon>
          <intron i_serial="4" don_prob="0.935" acc_prob="0.966">
            <gDNA_intron_boundary i_start="63417" i_stop="63583" i_length="167"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="63584" e_stop="63621" e_length="38"/>
          </exon>
          <intron i_serial="5" don_prob="0.982" acc_prob="0.930">
            <gDNA_intron_boundary i_start="63622" i_stop="63927" i_length="306"/>
          </intron>
          <exon e_serial="6" e_score="0.982">
            <gDNA_exon_boundary e_start="63928" e_stop="64325" e_length="398"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61508" stop="61727"/>
              <exon start="62449" stop="62543"/>
              <exon start="62907" stop="62993"/>
              <exon start="63354" stop="63416"/>
              <exon start="63584" stop="63621"/>
              <exon start="63928" stop="64325"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U318516" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TGGCTGCGTGTTCTTCACTGCCCAATCTGCTCCCAATAGCTTCAACTTTCTATATCCTCCATCACTGCTTAATTGTTGTTTCCATTTGACAAAATACAAAGTTCAAATTCTCAGATGGCTTCAATCGTAGTAGCTAAGCTGCATCCTCCTCCGCCCGCCATCACGGGCAGACAAACCCTTTTCGGAACTGTTAACACTTCTACACTTTTCGTCCCCACCA : CAAGACAAGGTCACCTGGCCATCACAGCAAAGGCTACTAGTGAAAGTTCTGAATCCTTATCCTCCCCAAGTGTTGTTAAATCAGTAAAGAATATT : TGGGACAACCCTGAAGACCGGATTGCTGTAATTGGGTTGGGAATTGCTGCTATTGTTGGTTTCTGGGCTGCTTCAAATTTTGTGGCG : GCAATCGACAGCCTGCCTCTCATTCCAGGTGTGTTTGAATTTATCGGGATATTGTTTTCTACT : TGGTTCGTATACAGATACCTCTTATTCAAGCCCAACAG : GCAAGAATTGTTTCAAGGGATCAATAAATCAATATCAGATATCTTAGGGCAGTGATCTGAAAATATTAGGATGATACAGTTCATGTTGTACTTCTGTATCCAAGCATCACCAAAATGCTGAATCATTTTACAGATGAAATGATATCTTCAGAAATGAGCCAACATTTTTTTTCCTCATATACTGCTTCTTACATCTATAATTTGTTAATATGCCTTTTGCCAACTGGAAGTAGAGTGCTTTCACCATCCCTCTCTCAATTTCCTATGGTTTTCTACTGTCTGCCATAGTCAGACTGATCCAACGAAAACTCTTTAGCAAGTTTGAGTTCACGTATATAAACCAAAAGTGGGTACCCTAATTTGTTTATGATTTGATATTTAGTATTTATTTAAAATTT</gDNA_template>
            <first_frame> W  L  R  V  L  H  C  P  I  C  S  Q  *  L  Q  L  S  I  S  S  I  T  A  *  L  L  F  P  F  D  K  I  Q  S  S  N  S  Q  M  A  S  I  V  V  A  K  L  H  P  P  P  P  A  I  T  G  R  Q  T  L  F  G  T  V  N  T  S  T  L  F  V  P  T   : T  R  Q  G  H  L  A  I  T  A  K  A  T  S  E  S  S  E  S  L  S  S  P  S  V  V  K  S  V  K  N  I  :  W  D  N  P  E  D  R  I  A  V  I  G  L  G  I  A  A  I  V  G  F  W  A  A  S  N  F  V  A  :  A  I  D  S  L  P  L  I  P  G  V  F  E  F  I  G  I  L  F  S  T  :  W  F  V  Y  R  Y  L  L  F  K  P  N  R :   Q  E  L  F  Q  G  I  N  K  S  I  S  D  I  L  G  Q  *  S  E  N  I  R  M  I  Q  F  M  L  Y  F  C  I  Q  A  S  P  K  C  *  I  I  L  Q  M  K  *  Y  L  Q  K  *  A  N  I  F  F  P  H  I  L  L  L  T  S  I  I  C  *  Y  A  F  C  Q  L  E  V  E  C  F  H  H  P  S  L  N  F  L  W  F  S  T  V  C  H  S  Q  T  D  P  T  K  T  L  *  Q  V  *  V  H  V  Y  K  P  K  V  G  T  L  I  C  L  *  F  D  I  *  Y  L  F  K  I  </first_frame>
            <second_frame>  G  C  V  F  F  T  A  Q  S  A  P  N  S  F  N  F  L  Y  P  P  S  L  L  N  C  C  F  H  L  T  K  Y  K  V  Q  I  L  R  W  L  Q  S  *  *  L  S  C  I  L  L  R  P  P  S  R  A  D  K  P  F  S  E  L  L  T  L  L  H  F  S  S  P  P  :  Q  D  K  V  T  W  P  S  Q  Q  R  L  L  V  K  V  L  N  P  Y  P  P  Q  V  L  L  N  Q  *  R  I  F :   G  T  T  L  K  T  G  L  L  *  L  G  W  E  L  L  L  L  L  V  S  G  L  L  Q  I  L  W  R :   Q  S  T  A  C  L  S  F  Q  V  C  L  N  L  S  G  Y  C  F  L  L :   G  S  Y  T  D  T  S  Y  S  S  P  T   : G  K  N  C  F  K  G  S  I  N  Q  Y  Q  I  S  *  G  S  D  L  K  I  L  G  *  Y  S  S  C  C  T  S  V  S  K  H  H  Q  N  A  E  S  F  Y  R  *  N  D  I  F  R  N  E  P  T  F  F  F  L  I  Y  C  F  L  H  L  *  F  V  N  M  P  F  A  N  W  K  *  S  A  F  T  I  P  L  S  I  S  Y  G  F  L  L  S  A  I  V  R  L  I  Q  R  K  L  F  S  K  F  E  F  T  Y  I  N  Q  K  W  V  P  *  F  V  Y  D  L  I  F  S  I  Y  L  K  F </second_frame>
            <third_frame>   A  A  C  S  S  L  P  N  L  L  P  I  A  S  T  F  Y  I  L  H  H  C  L  I  V  V  S  I  *  Q  N  T  K  F  K  F  S  D  G  F  N  R  S  S  *  A  A  S  S  S  A  R  H  H  G  Q  T  N  P  F  R  N  C  *  H  F  Y  T  F  R  P  H  H :   K  T  R  S  P  G  H  H  S  K  G  Y  *  *  K  F  *  I  L  I  L  P  K  C  C  *  I  S  K  E  Y   : L  G  Q  P  *  R  P  D  C  C  N  W  V  G  N  C  C  Y  C  W  F  L  G  C  F  K  F  C  G   : G  N  R  Q  P  A  S  H  S  R  C  V  *  I  Y  R  D  I  V  F  Y   : L  V  R  I  Q  I  P  L  I  Q  A  Q  Q  :  A  R  I  V  S  R  D  Q  *  I  N  I  R  Y  L  R  A  V  I  *  K  Y  *  D  D  T  V  H  V  V  L  L  Y  P  S  I  T  K  M  L  N  H  F  T  D  E  M  I  S  S  E  M  S  Q  H  F  F  S  S  Y  T  A  S  Y  I  Y  N  L  L  I  C  L  L  P  T  G  S  R  V  L  S  P  S  L  S  Q  F  P  M  V  F  Y  C  L  P  *  S  D  *  S  N  E  N  S  L  A  S  L  S  S  R  I  *  T  K  S  G  Y  P  N  L  F  M  I  *  Y  L  V  F  I  *  N   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C00HBa0081D06.1" strand="+"/>
                <serials PGL_serial="8" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="61580" stop="61727"/>
                    <exon start="62449" stop="62543"/>
                    <exon start="62907" stop="62993"/>
                    <exon start="63354" stop="63416"/>
                    <exon start="63584" stop="63621"/>
                    <exon start="63928" stop="63982"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>483</number_coding_nucleotides>
                  <number_encoded_amino_acids>161</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LLFPFDKIQSSNSQMASIVVAKLHPPPPAITGRQTLFGTVNTSTLFVPTTRQGHLAITAKATSESSESLSSPSVVKSVKNIWDNPEDRIAVIGLGIAAIVGFWAASNFVAAIDSLPLIPGVFEFIGILFSTWFVYRYLLFKPNRQELFQGINKSISDILGQ*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C00HBa0081D06.1" strand="+"/>
                <serials PGL_serial="8" AGS_serial="2" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="63997" stop="64215"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>216</number_coding_nucleotides>
                  <number_encoded_amino_acids>72</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DDTVHVVLLYPSITKMLNHFTDEMISSEMSQHFFSSYTASYIYNLLICLLPTGSRVLSPSLSQFPMVFYCLP*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="+" PGL_start="65827" PGL_stop="78478"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="65827" e_stop="65929"/>
            <exon e_start="66111" e_stop="66306"/>
            <exon e_start="68135" e_stop="69228"/>
            <exon e_start="70129" e_stop="70200"/>
            <exon e_start="71366" e_stop="71440"/>
            <exon e_start="72550" e_stop="72664"/>
            <exon e_start="73719" e_stop="73780"/>
            <exon e_start="73866" e_stop="73913"/>
            <exon e_start="75902" e_stop="76186"/>
            <exon e_start="76264" e_stop="76323"/>
            <exon e_start="76406" e_stop="76489"/>
            <exon e_start="76593" e_stop="76658"/>
            <exon e_start="76730" e_stop="76828"/>
            <exon e_start="76905" e_stop="77123"/>
            <exon e_start="77843" e_stop="77954"/>
            <exon e_start="78269" e_stop="78478"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.922" acc_prob="0.990" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.617" e_score="1.000"/>
          <exon-intron don_prob="0.984" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.654" acc_prob="0.986" e_score="1.000"/>
          <exon-intron don_prob="0.979" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.951" acc_prob="0.710" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.822" e_score="1.000"/>
          <exon-intron don_prob="0.988" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.683" acc_prob="0.862" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.990" acc_prob="0.999" e_score="0.917"/>
          <exon-intron don_prob="0.933" acc_prob="0.947" e_score="0.985"/>
          <exon-intron don_prob="0.378" acc_prob="0.254" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.820" e_score="1.000"/>
          <exon-intron don_prob="0.975" acc_prob="0.298" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="65827" e_stop="65929" e_length="103"/>
          </exon>
          <intron i_serial="1" don_prob="0.922" acc_prob="0.990">
            <gDNA_intron_boundary i_start="65930" i_stop="66110" i_length="181"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="66111" e_stop="66306" e_length="196"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.617">
            <gDNA_intron_boundary i_start="66307" i_stop="68134" i_length="1828"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="68135" e_stop="69228" e_length="1094"/>
          </exon>
          <intron i_serial="3" don_prob="0.984" acc_prob="0.998">
            <gDNA_intron_boundary i_start="69229" i_stop="70128" i_length="900"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="70129" e_stop="70200" e_length="72"/>
          </exon>
          <intron i_serial="4" don_prob="0.654" acc_prob="0.986">
            <gDNA_intron_boundary i_start="70201" i_stop="71365" i_length="1165"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="71366" e_stop="71440" e_length="75"/>
          </exon>
          <intron i_serial="5" don_prob="0.979" acc_prob="1.000">
            <gDNA_intron_boundary i_start="71441" i_stop="72549" i_length="1109"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="72550" e_stop="72664" e_length="115"/>
          </exon>
          <intron i_serial="6" don_prob="0.951" acc_prob="0.710">
            <gDNA_intron_boundary i_start="72665" i_stop="73718" i_length="1054"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="73719" e_stop="73780" e_length="62"/>
          </exon>
          <intron i_serial="7" don_prob="0.997" acc_prob="0.822">
            <gDNA_intron_boundary i_start="73781" i_stop="73865" i_length="85"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="73866" e_stop="73913" e_length="48"/>
          </exon>
          <intron i_serial="8" don_prob="0.988" acc_prob="0.999">
            <gDNA_intron_boundary i_start="73914" i_stop="75901" i_length="1988"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="75902" e_stop="76186" e_length="285"/>
          </exon>
          <intron i_serial="9" don_prob="0.683" acc_prob="0.862">
            <gDNA_intron_boundary i_start="76187" i_stop="76263" i_length="77"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="76264" e_stop="76323" e_length="60"/>
          </exon>
          <intron i_serial="10" don_prob="0.997" acc_prob="0.998">
            <gDNA_intron_boundary i_start="76324" i_stop="76405" i_length="82"/>
          </intron>
          <exon e_serial="11" e_score="0.917">
            <gDNA_exon_boundary e_start="76406" e_stop="76489" e_length="84"/>
          </exon>
          <intron i_serial="11" don_prob="0.990" acc_prob="0.999">
            <gDNA_intron_boundary i_start="76490" i_stop="76592" i_length="103"/>
          </intron>
          <exon e_serial="12" e_score="0.985">
            <gDNA_exon_boundary e_start="76593" e_stop="76658" e_length="66"/>
          </exon>
          <intron i_serial="12" don_prob="0.933" acc_prob="0.947">
            <gDNA_intron_boundary i_start="76659" i_stop="76729" i_length="71"/>
          </intron>
          <exon e_serial="13" e_score="1.000">
            <gDNA_exon_boundary e_start="76730" e_stop="76828" e_length="99"/>
          </exon>
          <intron i_serial="13" don_prob="0.378" acc_prob="0.254">
            <gDNA_intron_boundary i_start="76829" i_stop="76904" i_length="76"/>
          </intron>
          <exon e_serial="14" e_score="1.000">
            <gDNA_exon_boundary e_start="76905" e_stop="77123" e_length="219"/>
          </exon>
          <intron i_serial="14" don_prob="0.999" acc_prob="0.820">
            <gDNA_intron_boundary i_start="77124" i_stop="77842" i_length="719"/>
          </intron>
          <exon e_serial="15" e_score="1.000">
            <gDNA_exon_boundary e_start="77843" e_stop="77954" e_length="112"/>
          </exon>
          <intron i_serial="15" don_prob="0.975" acc_prob="0.298">
            <gDNA_intron_boundary i_start="77955" i_stop="78268" i_length="314"/>
          </intron>
          <exon e_serial="16" e_score="1.000">
            <gDNA_exon_boundary e_start="78269" e_stop="78478" e_length="210"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="65827" stop="65929"/>
              <exon start="66111" stop="66306"/>
              <exon start="68135" stop="69228"/>
              <exon start="70129" stop="70200"/>
              <exon start="71366" stop="71440"/>
              <exon start="72550" stop="72664"/>
              <exon start="73719" stop="73780"/>
              <exon start="73866" stop="73913"/>
              <exon start="75902" stop="76186"/>
              <exon start="76264" stop="76323"/>
              <exon start="76406" stop="76454"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U319325" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76272" stop="76323"/>
              <exon start="76406" stop="76489"/>
              <exon start="76593" stop="76658"/>
              <exon start="76730" stop="76828"/>
              <exon start="76905" stop="77123"/>
              <exon start="77843" stop="77954"/>
              <exon start="78269" stop="78478"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U318826" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TGACGGTGGACGCTGAAGTTCACCGTTCCTGCAGATCGATTTCTTTTTCGCCCTTCCCAAAATCTTTTCATTTTTATTGCTCCGCTTCCAAGTTCCAAGTGTG : GATGAAGGAGCTTTCCATGTAATTTGAGCTTTGGATCGAGTCAAAAAGATGGCGTGGTTTGGTGGGAAACTTGATTTGACGAACTTGGATCTTGCCGGTGCCGTGAATAAGCTCAGTGAGAGTGTCAAAAACATTGAAAAAAATTTCGACACTGCACTTGGTCTCGAGGAGAAATCTGAGTCTAGTAACAATGAAG : CTTCAGGGTTATGGCCTTCAACTACGGATAGGAGGGCCTTATTTGATCCTGTCATGTCTTTTATGGGGCAAAAAAGTGAGGGGACTGCTGAAGAATCTGTAGAGAAAGCTGAGTCGTCAAAGCCCACCTTGCCCACAGGGGAAGTAGTTGAAGATTCAGCTGAGACTACAACTCGACGTGGTGTGGTTCCTAAAGAACCAAAAGAAGAAACAACGGACATTATTGAAGAAACTAAATCGGTTCAAGAACCTATTGAAGAAGCAAAGGATGTTGATGCGAAACCAAATCAAATGATATCTGCTGAAGAAGAAACTGAGGAGGCAAGAGCTGTTGATGTCCAACTGAATTCTTCTACGGAACCAAGTTTTGATCAGGAGGAACAAAGAAGTGTTACTGGGCCAGATGAAAGAAAAGCTGAAATTAATTCACTGGCAGAAGCATCGAAGGTCAATGAGCTTGATCAGGAAACATCTCCAGGAATCCTCCAAAAGAATATTCCAGAGCGAGAATCATCTGAAAACCTCGAGTTGGTTGTTTCCCAATCATCAAATGCTTTATCTCAAACTGAAGTTGGTATCCCGCTGCTTGTTGATTCAAAGGAAAATACTGGTAATGATGGGGAACAGAAGAAAGAAGTCACTGAGGAATCTCCTCCTGTTCAATTAGAGGATGCATCAAATTACCCTACAGACAGGGAACAGAAGAAAGAAGTCACCATGGAATCTCCTTCAGCTGAATCACGGGATGCATCAAGTGACCGAGCAGATAGTGGAAGACCTTCTGTTTCAGATTCTGTAACTGCCAGCGAAGGTGAAAGTCTTGAAGAGCATTCTAACAGGAGCTTTCTTGGTGACCAGCACACTGATGAAGGTCTGAAGAAGCTATCTGATACAGTTATGCCTGAAAATGAGTTGGTTAGTATACCTGTGGAGGCTACCCAGCGAGGAAATGATCAGGAGACTGGTGTGAAAGAACGGTTGAGCTCCGGAAGCAACTCTTCAGATGTTACCAATTCAGTGGTTGAACTGGAGAAGCTGAAAAAGGAAATGAAAATGATGGAAACTGCATTACAAGGAGCTGCTAGACAAGCTCAG : GCTAAAGCTGATGAAATAGCGAAGTTGATGAATGAGAACGAGCAATTGAAGGCTGTTACTGAGGATCTGAGA : AGGAAGTCCAGTGATGCAGCAATTGAATCTCTGCGAGAAGAGTACCATCAAAAAGTTTCTGCTCTTGAGAGGAAG : GTTTATGCTCTCACCAAAGAAAGGGATACACTTCGCAGGGAACATAATAAGAAGAGTGATGCTGCAGCTCTTCTCAAAGAGAAGGATGAGATAATTACTCAAGTAATGGCTGAAG : GTGAGCAGCTTTCTAAAAAGCAAGCTGCCCAAGAAGCTCAGATGAGAAAGTTAAGGGCACAG : ATCAGAGAGCTTGAAGAAGAGAAGAAAGGATTACATACCAAGCTTGAG : GTTGAAGAGAACAAAGTAGAGAGTATAAAGAGGGACAAGGCAGCAACAGAAAAATTGCTTCATGAAACAGTCGAAAAACATCAAGCAGAACTTGCAACTCAAAAAGAATACTATACTAATGCTTTAAATGCTGCAAAAGAAGCAGAAGCTTTATCTGAGGCACGGGCTAACAATGAAGCTAGAACTCAACTAGAGGGTCGTCTCAGAGAGGCTGAAGACCGTGAAGCAATGCTTGTTCAGGCACTTGAAGAATTAAGGCAAACACTTACCAGAACGGAGCAGCAG : GCAGTTTTTAAAGAAGATATGCTCCGCAGAGAAATTGAAGATCTCCAGAAAAGATACCAA : GCCAGTGAACGTCGATGTGAGGAGTTGATAACACAAGTTCCCGAATCTACCAGACCTCTTCTCAGGCAGATAGAAGCCATGCAG : GAAACAAACTCCAGAAAGGCTGAAGCTTGGGCTGCTGTTGAGAGAACCTTGAATTCACGTCTTCAG : GAAGCCGAGGCAAAAGCTGCAACTTCAGAAGAAAAGGAGCGATCTATTAATGAACGCCTTTCTCAAACCCTATCCCGAATCAATGTTCTTGAGGCTCAG : ATATCTTGTCTTAGAGCTGAGCAGACACAGCTAACAAGGTCCCTTGACAAAGAGAGACAGCGGGCCGCAGAGAATAGGCAAGAATATCTTGCTCTAAAGGAGGAAGCTGAGACTAACGAAGGTCGTGTGAATCAGCTTGAAGAGGAAATTAAAGAACTCAGAAGGAAACACAAGCAGGAAATACAAGAAGCATTAACTCATCAGGAACTCCTGCGGCAG : GAGTTGGAAAGGGAGAAAACTGCTCGTTTGGATCAAGAAAGGGCCGCTCGTTCTACTAATTATGTGCCTGATCAGAGCCCAATAATGAAGCAGAAATCTGGGATAGAAAATG : TTGCAGGAAGTTTGACACGCAGACTTTCGAGTGCTAGCAGCTTGAGTAGTATGGAGGAAAGCTATTTTCTGCAAGCATCTTTGGACTCGTCTGACAATTTATCTGAGCGTAGAAATGCATTAGAGGGTAATATAAGTCCATACTTTATGAAGAGTATGACGCCTGCATTTCGCCAGAAAGATGGGGAACTTGCGTCTTATATGTCTCGAC</gDNA_template>
            <first_frame> *  R  W  T  L  K  F  T  V  P  A  D  R  F  L  F  R  P  S  Q  N  L  F  I  F  I  A  P  L  P  S  S  K  C   : G  *  R  S  F  P  C  N  L  S  F  G  S  S  Q  K  D  G  V  V  W  W  E  T  *  F  D  E  L  G  S  C  R  C  R  E  *  A  Q  *  E  C  Q  K  H  *  K  K  F  R  H  C  T  W  S  R  G  E  I  *  V  *  *  Q  *  S :   F  R  V  M  A  F  N  Y  G  *  E  G  L  I  *  S  C  H  V  F  Y  G  A  K  K  *  G  D  C  *  R  I  C  R  E  S  *  V  V  K  A  H  L  A  H  R  G  S  S  *  R  F  S  *  D  Y  N  S  T  W  C  G  S  *  R  T  K  R  R  N  N  G  H  Y  *  R  N  *  I  G  S  R  T  Y  *  R  S  K  G  C  *  C  E  T  K  S  N  D  I  C  *  R  R  N  *  G  G  K  S  C  *  C  P  T  E  F  F  Y  G  T  K  F  *  S  G  G  T  K  K  C  Y  W  A  R  *  K  K  S  *  N  *  F  T  G  R  S  I  E  G  Q  *  A  *  S  G  N  I  S  R  N  P  P  K  E  Y  S  R  A  R  I  I  *  K  P  R  V  G  C  F  P  I  I  K  C  F  I  S  N  *  S  W  Y  P  A  A  C  *  F  K  G  K  Y  W  *  *  W  G  T  E  E  R  S  H  *  G  I  S  S  C  S  I  R  G  C  I  K  L  P  Y  R  Q  G  T  E  E  R  S  H  H  G  I  S  F  S  *  I  T  G  C  I  K  *  P  S  R  *  W  K  T  F  C  F  R  F  C  N  C  Q  R  R  *  K  S  *  R  A  F  *  Q  E  L  S  W  *  P  A  H  *  *  R  S  E  E  A  I  *  Y  S  Y  A  *  K  *  V  G  *  Y  T  C  G  G  Y  P  A  R  K  *  S  G  D  W  C  E  R  T  V  E  L  R  K  Q  L  F  R  C  Y  Q  F  S  G  *  T  G  E  A  E  K  G  N  E  N  D  G  N  C  I  T  R  S  C  *  T  S  S   : G  *  S  *  *  N  S  E  V  D  E  *  E  R  A  I  E  G  C  Y  *  G  S  E   : K  E  V  Q  *  C  S  N  *  I  S  A  R  R  V  P  S  K  S  F  C  S  *  E  E   : G  L  C  S  H  Q  R  K  G  Y  T  S  Q  G  T  *  *  E  E  *  C  C  S  S  S  Q  R  E  G  *  D  N  Y  S  S  N  G  *  R :   *  A  A  F  *  K  A  S  C  P  R  S  S  D  E  K  V  K  G  T   : D  Q  R  A  *  R  R  E  E  R  I  T  Y  Q  A  *   : G  *  R  E  Q  S  R  E  Y  K  E  G  Q  G  S  N  R  K  I  A  S  *  N  S  R  K  T  S  S  R  T  C  N  S  K  R  I  L  Y  *  C  F  K  C  C  K  R  S  R  S  F  I  *  G  T  G  *  Q  *  S  *  N  S  T  R  G  S  S  Q  R  G  *  R  P  *  S  N  A  C  S  G  T  *  R  I  K  A  N  T  Y  Q  N  G  A  A   : G  S  F  *  R  R  Y  A  P  Q  R  N  *  R  S  P  E  K  I  P   : S  Q  *  T  S  M  *  G  V  D  N  T  S  S  R  I  Y  Q  T  S  S  Q  A  D  R  S  H  A   : G  N  K  L  Q  K  G  *  S  L  G  C  C  *  E  N  L  E  F  T  S  S   : G  S  R  G  K  S  C  N  F  R  R  K  G  A  I  Y  *  *  T  P  F  S  N  P  I  P  N  Q  C  S  *  G  S   : D  I  L  S  *  S  *  A  D  T  A  N  K  V  P  *  Q  R  E  T  A  G  R  R  E  *  A  R  I  S  C  S  K  G  G  S  *  D  *  R  R  S  C  E  S  A  *  R  G  N  *  R  T  Q  K  E  T  Q  A  G  N  T  R  S  I  N  S  S  G  T  P  A  A   : G  V  G  K  G  E  N  C  S  F  G  S  R  K  G  R  S  F  Y  *  L  C  A  *  S  E  P  N  N  E  A  E  I  W  D  R  K  C :   C  R  K  F  D  T  Q  T  F  E  C  *  Q  L  E  *  Y  G  G  K  L  F  S  A  S  I  F  G  L  V  *  Q  F  I  *  A  *  K  C  I  R  G  *  Y  K  S  I  L  Y  E  E  Y  D  A  C  I  S  P  E  R  W  G  T  C  V  L  Y  V  S   </first_frame>
            <second_frame>  D  G  G  R  *  S  S  P  F  L  Q  I  D  F  F  F  A  L  P  K  I  F  S  F  L  L  L  R  F  Q  V  P  S  V  :  D  E  G  A  F  H  V  I  *  A  L  D  R  V  K  K  M  A  W  F  G  G  K  L  D  L  T  N  L  D  L  A  G  A  V  N  K  L  S  E  S  V  K  N  I  E  K  N  F  D  T  A  L  G  L  E  E  K  S  E  S  S  N  N  E   : A  S  G  L  W  P  S  T  T  D  R  R  A  L  F  D  P  V  M  S  F  M  G  Q  K  S  E  G  T  A  E  E  S  V  E  K  A  E  S  S  K  P  T  L  P  T  G  E  V  V  E  D  S  A  E  T  T  T  R  R  G  V  V  P  K  E  P  K  E  E  T  T  D  I  I  E  E  T  K  S  V  Q  E  P  I  E  E  A  K  D  V  D  A  K  P  N  Q  M  I  S  A  E  E  E  T  E  E  A  R  A  V  D  V  Q  L  N  S  S  T  E  P  S  F  D  Q  E  E  Q  R  S  V  T  G  P  D  E  R  K  A  E  I  N  S  L  A  E  A  S  K  V  N  E  L  D  Q  E  T  S  P  G  I  L  Q  K  N  I  P  E  R  E  S  S  E  N  L  E  L  V  V  S  Q  S  S  N  A  L  S  Q  T  E  V  G  I  P  L  L  V  D  S  K  E  N  T  G  N  D  G  E  Q  K  K  E  V  T  E  E  S  P  P  V  Q  L  E  D  A  S  N  Y  P  T  D  R  E  Q  K  K  E  V  T  M  E  S  P  S  A  E  S  R  D  A  S  S  D  R  A  D  S  G  R  P  S  V  S  D  S  V  T  A  S  E  G  E  S  L  E  E  H  S  N  R  S  F  L  G  D  Q  H  T  D  E  G  L  K  K  L  S  D  T  V  M  P  E  N  E  L  V  S  I  P  V  E  A  T  Q  R  G  N  D  Q  E  T  G  V  K  E  R  L  S  S  G  S  N  S  S  D  V  T  N  S  V  V  E  L  E  K  L  K  K  E  M  K  M  M  E  T  A  L  Q  G  A  A  R  Q  A  Q  :  A  K  A  D  E  I  A  K  L  M  N  E  N  E  Q  L  K  A  V  T  E  D  L  R  :  R  K  S  S  D  A  A  I  E  S  L  R  E  E  Y  H  Q  K  V  S  A  L  E  R  K  :  V  Y  A  L  T  K  E  R  D  T  L  R  R  E  H  N  K  K  S  D  A  A  A  L  L  K  E  K  D  E  I  I  T  Q  V  M  A  E   : G  E  Q  L  S  K  K  Q  A  A  Q  E  A  Q  M  R  K  L  R  A  Q  :  I  R  E  L  E  E  E  K  K  G  L  H  T  K  L  E  :  V  E  E  N  K  V  E  S  I  K  R  D  K  A  A  T  E  K  L  L  H  E  T  V  E  K  H  Q  A  E  L  A  T  Q  K  E  Y  Y  T  N  A  L  N  A  A  K  E  A  E  A  L  S  E  A  R  A  N  N  E  A  R  T  Q  L  E  G  R  L  R  E  A  E  D  R  E  A  M  L  V  Q  A  L  E  E  L  R  Q  T  L  T  R  T  E  Q  Q  :  A  V  F  K  E  D  M  L  R  R  E  I  E  D  L  Q  K  R  Y  Q  :  A  S  E  R  R  C  E  E  L  I  T  Q  V  P  E  S  T  R  P  L  L  R  Q  I  E  A  M  Q  :  E  T  N  S  R  K  A  E  A  W  A  A  V  E  R  T  L  N  S  R  L  Q  :  E  A  E  A  K  A  A  T  S  E  E  K  E  R  S  I  N  E  R  L  S  Q  T  L  S  R  I  N  V  L  E  A  Q  :  I  S  C  L  R  A  E  Q  T  Q  L  T  R  S  L  D  K  E  R  Q  R  A  A  E  N  R  Q  E  Y  L  A  L  K  E  E  A  E  T  N  E  G  R  V  N  Q  L  E  E  E  I  K  E  L  R  R  K  H  K  Q  E  I  Q  E  A  L  T  H  Q  E  L  L  R  Q  :  E  L  E  R  E  K  T  A  R  L  D  Q  E  R  A  A  R  S  T  N  Y  V  P  D  Q  S  P  I  M  K  Q  K  S  G  I  E  N   : V  A  G  S  L  T  R  R  L  S  S  A  S  S  L  S  S  M  E  E  S  Y  F  L  Q  A  S  L  D  S  S  D  N  L  S  E  R  R  N  A  L  E  G  N  I  S  P  Y  F  M  K  S  M  T  P  A  F  R  Q  K  D  G  E  L  A  S  Y  M  S  R  </second_frame>
            <third_frame>   T  V  D  A  E  V  H  R  S  C  R  S  I  S  F  S  P  F  P  K  S  F  H  F  Y  C  S  A  S  K  F  Q  V  W :   M  K  E  L  S  M  *  F  E  L  W  I  E  S  K  R  W  R  G  L  V  G  N  L  I  *  R  T  W  I  L  P  V  P  *  I  S  S  V  R  V  S  K  T  L  K  K  I  S  T  L  H  L  V  S  R  R  N  L  S  L  V  T  M  K  :  L  Q  G  Y  G  L  Q  L  R  I  G  G  P  Y  L  I  L  S  C  L  L  W  G  K  K  V  R  G  L  L  K  N  L  *  R  K  L  S  R  Q  S  P  P  C  P  Q  G  K  *  L  K  I  Q  L  R  L  Q  L  D  V  V  W  F  L  K  N  Q  K  K  K  Q  R  T  L  L  K  K  L  N  R  F  K  N  L  L  K  K  Q  R  M  L  M  R  N  Q  I  K  *  Y  L  L  K  K  K  L  R  R  Q  E  L  L  M  S  N  *  I  L  L  R  N  Q  V  L  I  R  R  N  K  E  V  L  L  G  Q  M  K  E  K  L  K  L  I  H  W  Q  K  H  R  R  S  M  S  L  I  R  K  H  L  Q  E  S  S  K  R  I  F  Q  S  E  N  H  L  K  T  S  S  W  L  F  P  N  H  Q  M  L  Y  L  K  L  K  L  V  S  R  C  L  L  I  Q  R  K  I  L  V  M  M  G  N  R  R  K  K  S  L  R  N  L  L  L  F  N  *  R  M  H  Q  I  T  L  Q  T  G  N  R  R  K  K  S  P  W  N  L  L  Q  L  N  H  G  M  H  Q  V  T  E  Q  I  V  E  D  L  L  F  Q  I  L  *  L  P  A  K  V  K  V  L  K  S  I  L  T  G  A  F  L  V  T  S  T  L  M  K  V  *  R  S  Y  L  I  Q  L  C  L  K  M  S  W  L  V  Y  L  W  R  L  P  S  E  E  M  I  R  R  L  V  *  K  N  G  *  A  P  E  A  T  L  Q  M  L  P  I  Q  W  L  N  W  R  S  *  K  R  K  *  K  *  W  K  L  H  Y  K  E  L  L  D  K  L  R :   L  K  L  M  K  *  R  S  *  *  M  R  T  S  N  *  R  L  L  L  R  I  *  E :   G  S  P  V  M  Q  Q  L  N  L  C  E  K  S  T  I  K  K  F  L  L  L  R  G  R :   F  M  L  S  P  K  K  G  I  H  F  A  G  N  I  I  R  R  V  M  L  Q  L  F  S  K  R  R  M  R  *  L  L  K  *  W  L  K  :  V  S  S  F  L  K  S  K  L  P  K  K  L  R  *  E  S  *  G  H  R :   S  E  S  L  K  K  R  R  K  D  Y  I  P  S  L  R :   L  K  R  T  K  *  R  V  *  R  G  T  R  Q  Q  Q  K  N  C  F  M  K  Q  S  K  N  I  K  Q  N  L  Q  L  K  K  N  T  I  L  M  L  *  M  L  Q  K  K  Q  K  L  Y  L  R  H  G  L  T  M  K  L  E  L  N  *  R  V  V  S  E  R  L  K  T  V  K  Q  C  L  F  R  H  L  K  N  *  G  K  H  L  P  E  R  S  S  R :   Q  F  L  K  K  I  C  S  A  E  K  L  K  I  S  R  K  D  T  K :   P  V  N  V  D  V  R  S  *  *  H  K  F  P  N  L  P  D  L  F  S  G  R  *  K  P  C  R :   K  Q  T  P  E  R  L  K  L  G  L  L  L  R  E  P  *  I  H  V  F  R :   K  P  R  Q  K  L  Q  L  Q  K  K  R  S  D  L  L  M  N  A  F  L  K  P  Y  P  E  S  M  F  L  R  L  R :   Y  L  V  L  E  L  S  R  H  S  *  Q  G  P  L  T  K  R  D  S  G  P  Q  R  I  G  K  N  I  L  L  *  R  R  K  L  R  L  T  K  V  V  *  I  S  L  K  R  K  L  K  N  S  E  G  N  T  S  R  K  Y  K  K  H  *  L  I  R  N  S  C  G  R :   S  W  K  G  R  K  L  L  V  W  I  K  K  G  P  L  V  L  L  I  M  C  L  I  R  A  Q  *  *  S  R  N  L  G  *  K  M  :  L  Q  E  V  *  H  A  D  F  R  V  L  A  A  *  V  V  W  R  K  A  I  F  C  K  H  L  W  T  R  L  T  I  Y  L  S  V  E  M  H  *  R  V  I  *  V  H  T  L  *  R  V  *  R  L  H  F  A  R  K  M  G  N  L  R  L  I  C  L  D </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C00HBa0081D06.1" strand="+"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="66138" stop="66306"/>
                    <exon start="68135" stop="69228"/>
                    <exon start="70129" stop="70200"/>
                    <exon start="71366" stop="71440"/>
                    <exon start="72550" stop="72664"/>
                    <exon start="73719" stop="73780"/>
                    <exon start="73866" stop="73913"/>
                    <exon start="75902" stop="76186"/>
                    <exon start="76264" stop="76323"/>
                    <exon start="76406" stop="76489"/>
                    <exon start="76593" stop="76658"/>
                    <exon start="76730" stop="76828"/>
                    <exon start="76905" stop="77123"/>
                    <exon start="77843" stop="77954"/>
                    <exon start="78269" stop="78477"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>2769</number_coding_nucleotides>
                  <number_encoded_amino_acids>923</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ALDRVKKMAWFGGKLDLTNLDLAGAVNKLSESVKNIEKNFDTALGLEEKSESSNNEASGLWPSTTDRRALFDPVMSFMGQKSEGTAEESVEKAESSKPTLPTGEVVEDSAETTTRRGVVPKEPKEETTDIIEETKSVQEPIEEAKDVDAKPNQMISAEEETEEARAVDVQLNSSTEPSFDQEEQRSVTGPDERKAEINSLAEASKVNELDQETSPGILQKNIPERESSENLELVVSQSSNALSQTEVGIPLLVDSKENTGNDGEQKKEVTEESPPVQLEDASNYPTDREQKKEVTMESPSAESRDASSDRADSGRPSVSDSVTASEGESLEEHSNRSFLGDQHTDEGLKKLSDTVMPENELVSIPVEATQRGNDQETGVKERLSSGSNSSDVTNSVVELEKLKKEMKMMETALQGAARQAQAKADEIAKLMNENEQLKAVTEDLRRKSSDAAIESLREEYHQKVSALERKVYALTKERDTLRREHNKKSDAAALLKEKDEIITQVMAEGEQLSKKQAAQEAQMRKLRAQIRELEEEKKGLHTKLEVEENKVESIKRDKAATEKLLHETVEKHQAELATQKEYYTNALNAAKEAEALSEARANNEARTQLEGRLREAEDREAMLVQALEELRQTLTRTEQQAVFKEDMLRREIEDLQKRYQASERRCEELITQVPESTRPLLRQIEAMQETNSRKAEAWAAVERTLNSRLQEAEAKAATSEEKERSINERLSQTLSRINVLEAQISCLRAEQTQLTRSLDKERQRAAENRQEYLALKEEAETNEGRVNQLEEEIKELRRKHKQEIQEALTHQELLRQELEREKTARLDQERAARSTNYVPDQSPIMKQKSGIENVAGSLTRRLSSASSLSSMEESYFLQASLDSSDNLSERRNALEGNISPYFMKSMTPAFRQKDGELASYMSR</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="+" PGL_start="81805" PGL_stop="89669"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="81805" e_stop="81884"/>
            <exon e_start="82016" e_stop="82167"/>
            <exon e_start="82607" e_stop="82718"/>
            <exon e_start="82842" e_stop="82909"/>
            <exon e_start="83244" e_stop="83376"/>
            <exon e_start="83782" e_stop="83881"/>
            <exon e_start="83946" e_stop="84058"/>
            <exon e_start="84316" e_stop="84409"/>
            <exon e_start="85766" e_stop="85919"/>
            <exon e_start="86008" e_stop="86151"/>
            <exon e_start="86243" e_stop="86316"/>
            <exon e_start="86428" e_stop="86516"/>
            <exon e_start="86915" e_stop="87029"/>
            <exon e_start="88306" e_stop="89017"/>
            <exon e_start="89646" e_stop="89669"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.974" acc_prob="0.978" e_score="1.000"/>
          <exon-intron don_prob="0.799" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.655" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.179" e_score="1.000"/>
          <exon-intron don_prob="0.992" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.991" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.998" e_score="0.991"/>
          <exon-intron don_prob="0.881" acc_prob="0.981" e_score="1.000"/>
          <exon-intron don_prob="0.957" acc_prob="0.977" e_score="1.000"/>
          <exon-intron don_prob="0.961" acc_prob="0.980" e_score="1.000"/>
          <exon-intron don_prob="0.048" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.831" acc_prob="0.942" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.999"/>
          <exon-only e_score="0.667"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="81805" e_stop="81884" e_length="80"/>
          </exon>
          <intron i_serial="1" don_prob="0.974" acc_prob="0.978">
            <gDNA_intron_boundary i_start="81885" i_stop="82015" i_length="131"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="82016" e_stop="82167" e_length="152"/>
          </exon>
          <intron i_serial="2" don_prob="0.799" acc_prob="0.999">
            <gDNA_intron_boundary i_start="82168" i_stop="82606" i_length="439"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="82607" e_stop="82718" e_length="112"/>
          </exon>
          <intron i_serial="3" don_prob="0.655" acc_prob="1.000">
            <gDNA_intron_boundary i_start="82719" i_stop="82841" i_length="123"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="82842" e_stop="82909" e_length="68"/>
          </exon>
          <intron i_serial="4" don_prob="0.000" acc_prob="0.179">
            <gDNA_intron_boundary i_start="82910" i_stop="83243" i_length="334"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="83244" e_stop="83376" e_length="133"/>
          </exon>
          <intron i_serial="5" don_prob="0.992" acc_prob="0.000">
            <gDNA_intron_boundary i_start="83377" i_stop="83781" i_length="405"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="83782" e_stop="83881" e_length="100"/>
          </exon>
          <intron i_serial="6" don_prob="1.000" acc_prob="0.991">
            <gDNA_intron_boundary i_start="83882" i_stop="83945" i_length="64"/>
          </intron>
          <exon e_serial="7" e_score="0.991">
            <gDNA_exon_boundary e_start="83946" e_stop="84058" e_length="113"/>
          </exon>
          <intron i_serial="7" don_prob="1.000" acc_prob="0.998">
            <gDNA_intron_boundary i_start="84059" i_stop="84315" i_length="257"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="84316" e_stop="84409" e_length="94"/>
          </exon>
          <intron i_serial="8" don_prob="0.881" acc_prob="0.981">
            <gDNA_intron_boundary i_start="84410" i_stop="85765" i_length="1356"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="85766" e_stop="85919" e_length="154"/>
          </exon>
          <intron i_serial="9" don_prob="0.957" acc_prob="0.977">
            <gDNA_intron_boundary i_start="85920" i_stop="86007" i_length="88"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="86008" e_stop="86151" e_length="144"/>
          </exon>
          <intron i_serial="10" don_prob="0.961" acc_prob="0.980">
            <gDNA_intron_boundary i_start="86152" i_stop="86242" i_length="91"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="86243" e_stop="86316" e_length="74"/>
          </exon>
          <intron i_serial="11" don_prob="0.048" acc_prob="1.000">
            <gDNA_intron_boundary i_start="86317" i_stop="86427" i_length="111"/>
          </intron>
          <exon e_serial="12" e_score="1.000">
            <gDNA_exon_boundary e_start="86428" e_stop="86516" e_length="89"/>
          </exon>
          <intron i_serial="12" don_prob="0.831" acc_prob="0.942">
            <gDNA_intron_boundary i_start="86517" i_stop="86914" i_length="398"/>
          </intron>
          <exon e_serial="13" e_score="1.000">
            <gDNA_exon_boundary e_start="86915" e_stop="87029" e_length="115"/>
          </exon>
          <intron i_serial="13" don_prob="0.999" acc_prob="0.997">
            <gDNA_intron_boundary i_start="87030" i_stop="88305" i_length="1276"/>
          </intron>
          <exon e_serial="14" e_score="0.999">
            <gDNA_exon_boundary e_start="88306" e_stop="89017" e_length="712"/>
          </exon>
          <intron i_serial="14" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="89018" i_stop="89645" i_length="628"/>
          </intron>
          <exon e_serial="15" e_score="0.667">
            <gDNA_exon_boundary e_start="89646" e_stop="89669" e_length="24"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81805" stop="81884"/>
              <exon start="82016" stop="82167"/>
              <exon start="82607" stop="82718"/>
              <exon start="82842" stop="82909"/>
              <exon start="83244" stop="83376"/>
              <exon start="83782" stop="83881"/>
              <exon start="83946" stop="84058"/>
              <exon start="84316" stop="84409"/>
              <exon start="85766" stop="85919"/>
              <exon start="86008" stop="86151"/>
              <exon start="86243" stop="86316"/>
              <exon start="86428" stop="86516"/>
              <exon start="86915" stop="87029"/>
              <exon start="88306" stop="89017"/>
              <exon start="89646" stop="89669"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U325537" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTTTCCTTTTTTAATTAATTTCTTTCTAAAACTTCACTACCAATATGCAATAGCTAGTGCCTCACAAAACGTTTCAGGAG : GTTGGCGTATATGATTGGGATTTTTGTTACAGTACCATAGATCAGATCACACAATATGAGAGGTGGTGGTCTTGCAGATGCTTACTCCATGTACAAGCGTGCATCAACTAAAGACCAGTTCACTGATTATGAAGATAGAGAAGAAAATCTAG : ATCGTGCCGAAAATGGTGTGTGGAAAGAAATTGGAAACCCCTCATGGAAGCGGCCGTTGCCACATATACTGGTGGCAATTATTTCATCACTCTTGTTTGGCTACCATCTTGG : GGTGGTTAATGACACTCTAGAAAGCATGTCTTTGGACCTTGACTTCAGTGGCAGCACCTTGGCGGAAG : GTCTAGTTGTGAGTACATGTTTGGGAGGTGCTCTTTTGGGCTCTATATTCAGTGGTTGGATAGCAGATGGGGTTGGTCGTCGGAGAGGCTTTCAACTGTGTGCTCTACCAATGATTATAGGTGCTTCTATGAG : TGCCGCAACCAGTACTCTTGGAGTTATGCTTCTTGGAAGGTTATTTGTTGGAATAGGGATGGGCCTTGGCCCTGCTGTTGCTGCTCTCTATGTTGCAGAG : GTTTCACCAGCTTTTGTTAGAGGCACTTATGGGAGTTTCACTCAGATCGCCACATGCCTTGGGCTCCTGGGATCTCTTCTCATTGGAATTCCTGCCAAGGATACTGCTGGTTG : GTGGCGAGTTTGCTTTTGGATATCCACCATTCCTGCTGCAATACTTGCTGTTTTGATGGAATTCTGTGCCGAGAGTCCTCACTGGCTTGTTAAG : AGAGGAAGAATTGATTTAGCTGAAGAAGAGCTTGAAAAGCTTATGGGAGCACCACATGTTAAATATGCCATTGCAGAAATGTCAAAGACAGACAAAGGAGATGAGGTGGATAATGTTAGGTTTGGAGAGCTATTGTATGGTCGCCATTTTAAAG : TGGTTTTCATTGGATCTGCCTTATTTGCTTTGCAACAACTATCTGGAATAAATGCTGTATTTTATTTCTCTTCAACTGTGTTTAAGAAGGCTGGAGTACCTACGGACACTGCAAATACATGTGTTGGGATTGTAAACTTAACAG : GGTCTATTATTGCAATGATGTTGATGGATAGGCTTGGGAGGAAGGTGCTTCTAATTGGGAGTTTTTTGGGCATG : GCAGTCGCAACAGGTCTTCAAGTAGCAGCTGCGAGTTCATTTGTACCAAGCTTTGCAGTATTATACCTATCAGTTGGCGGGACCCTACT : GTATGTGTTAGCATTTTCTTTGGGTGCTGGTCCAGTCCCCAGCCTCCTGCTGTCAGAGATATTTCCTGGCCGGATTAGAGCAAAGGCAATGGCTTTATGCATGGCTGCACATTGG : GTCATAAATTTTTTGGTCGGCCTTCTGTTTCTGCCGATGCTTGAGCATCTTGGACCACAAATAGTTTATGCGATCTTTGCAGGATTTTGCTTGTTTGCACTGGCCTTTGTGAAAAAGAATGTGGTGGAAACGAAAGGGAAAACATTACAGGAGATTGAGTTTGCCCTTCTTCCATCTCATTAGTTGGTGACTAGATCACACTCTATACTAAAGTTCAGATTGGAAAATGTTAAGGTCCTAGTGATTGAACATCCAAATTCTTTGCTATAGCTATTTCTTGATTTGTACAATTTCGGAGTGTGTTCATAGGCAGGAAAGGCAGCAACAATGAACAATCAAGATAAAGATTGTCACAAAGCGAGTTTTCATAGGGCAATTGTCACTCTGCTTATTTTTGCTGCTTTTTTGCTCACTCCACTGGTCGGTGACTATTGCCTGAGGGAGCATGAAACTGCATCTGCCTCGGCCAGTAGTAGATCACATATGTACTACAGAGTACCTATTGTTGTTATCTTTGTATACCTTTCTTTTAATTTTTACCTTGATCTGATTTTTGTAATTAGCATGACACGGAAAGGCTACTCTAAACATTCCTTACAGAAATAATGTTACAGATTTTGAATTAGCAAGATACTGGTAGCTGCTCTGCTGTAACAAGAAATATTGGTAGTATTGTAGTATACAATTGATTAATGTTAGCTGAGATTTTTCA : AATCAAACAAACAAAAAAAGGGAC</gDNA_template>
            <first_frame> F  S  F  F  N  *  F  L  S  K  T  S  L  P  I  C  N  S  *  C  L  T  K  R  F  R  R :   L  A  Y  M  I  G  I  F  V  T  V  P  *  I  R  S  H  N  M  R  G  G  G  L  A  D  A  Y  S  M  Y  K  R  A  S  T  K  D  Q  F  T  D  Y  E  D  R  E  E  N  L   : D  R  A  E  N  G  V  W  K  E  I  G  N  P  S  W  K  R  P  L  P  H  I  L  V  A  I  I  S  S  L  L  F  G  Y  H  L  G :   V  V  N  D  T  L  E  S  M  S  L  D  L  D  F  S  G  S  T  L  A  E   : G  L  V  V  S  T  C  L  G  G  A  L  L  G  S  I  F  S  G  W  I  A  D  G  V  G  R  R  R  G  F  Q  L  C  A  L  P  M  I  I  G  A  S  M  S :   A  A  T  S  T  L  G  V  M  L  L  G  R  L  F  V  G  I  G  M  G  L  G  P  A  V  A  A  L  Y  V  A  E  :  V  S  P  A  F  V  R  G  T  Y  G  S  F  T  Q  I  A  T  C  L  G  L  L  G  S  L  L  I  G  I  P  A  K  D  T  A  G  W :   W  R  V  C  F  W  I  S  T  I  P  A  A  I  L  A  V  L  M  E  F  C  A  E  S  P  H  W  L  V  K  :  R  G  R  I  D  L  A  E  E  E  L  E  K  L  M  G  A  P  H  V  K  Y  A  I  A  E  M  S  K  T  D  K  G  D  E  V  D  N  V  R  F  G  E  L  L  Y  G  R  H  F  K   : V  V  F  I  G  S  A  L  F  A  L  Q  Q  L  S  G  I  N  A  V  F  Y  F  S  S  T  V  F  K  K  A  G  V  P  T  D  T  A  N  T  C  V  G  I  V  N  L  T   : G  S  I  I  A  M  M  L  M  D  R  L  G  R  K  V  L  L  I  G  S  F  L  G  M  :  A  V  A  T  G  L  Q  V  A  A  A  S  S  F  V  P  S  F  A  V  L  Y  L  S  V  G  G  T  L  L :   Y  V  L  A  F  S  L  G  A  G  P  V  P  S  L  L  L  S  E  I  F  P  G  R  I  R  A  K  A  M  A  L  C  M  A  A  H  W  :  V  I  N  F  L  V  G  L  L  F  L  P  M  L  E  H  L  G  P  Q  I  V  Y  A  I  F  A  G  F  C  L  F  A  L  A  F  V  K  K  N  V  V  E  T  K  G  K  T  L  Q  E  I  E  F  A  L  L  P  S  H  *  L  V  T  R  S  H  S  I  L  K  F  R  L  E  N  V  K  V  L  V  I  E  H  P  N  S  L  L  *  L  F  L  D  L  Y  N  F  G  V  C  S  *  A  G  K  A  A  T  M  N  N  Q  D  K  D  C  H  K  A  S  F  H  R  A  I  V  T  L  L  I  F  A  A  F  L  L  T  P  L  V  G  D  Y  C  L  R  E  H  E  T  A  S  A  S  A  S  S  R  S  H  M  Y  Y  R  V  P  I  V  V  I  F  V  Y  L  S  F  N  F  Y  L  D  L  I  F  V  I  S  M  T  R  K  G  Y  S  K  H  S  L  Q  K  *  C  Y  R  F  *  I  S  K  I  L  V  A  A  L  L  *  Q  E  I  L  V  V  L  *  Y  T  I  D  *  C  *  L  R  F  F   : K  S  N  K  Q  K  K  G  </first_frame>
            <second_frame>  F  P  F  L  I  N  F  F  L  K  L  H  Y  Q  Y  A  I  A  S  A  S  Q  N  V  S  G   : G  W  R  I  *  L  G  F  L  L  Q  Y  H  R  S  D  H  T  I  *  E  V  V  V  L  Q  M  L  T  P  C  T  S  V  H  Q  L  K  T  S  S  L  I  M  K  I  E  K  K  I  *  :  I  V  P  K  M  V  C  G  K  K  L  E  T  P  H  G  S  G  R  C  H  I  Y  W  W  Q  L  F  H  H  S  C  L  A  T  I  L   : G  W  L  M  T  L  *  K  A  C  L  W  T  L  T  S  V  A  A  P  W  R  K  :  V  *  L  *  V  H  V  W  E  V  L  F  W  A  L  Y  S  V  V  G  *  Q  M  G  L  V  V  G  E  A  F  N  C  V  L  Y  Q  *  L  *  V  L  L  *   : V  P  Q  P  V  L  L  E  L  C  F  L  E  G  Y  L  L  E  *  G  W  A  L  A  L  L  L  L  L  S  M  L  Q  R :   F  H  Q  L  L  L  E  A  L  M  G  V  S  L  R  S  P  H  A  L  G  S  W  D  L  F  S  L  E  F  L  P  R  I  L  L  V   : G  G  E  F  A  F  G  Y  P  P  F  L  L  Q  Y  L  L  F  *  W  N  S  V  P  R  V  L  T  G  L  L  R :   E  E  E  L  I  *  L  K  K  S  L  K  S  L  W  E  H  H  M  L  N  M  P  L  Q  K  C  Q  R  Q  T  K  E  M  R  W  I  M  L  G  L  E  S  Y  C  M  V  A  I  L  K  :  W  F  S  L  D  L  P  Y  L  L  C  N  N  Y  L  E  *  M  L  Y  F  I  S  L  Q  L  C  L  R  R  L  E  Y  L  R  T  L  Q  I  H  V  L  G  L  *  T  *  Q  :  G  L  L  L  Q  *  C  *  W  I  G  L  G  G  R  C  F  *  L  G  V  F  W  A  W :   Q  S  Q  Q  V  F  K  *  Q  L  R  V  H  L  Y  Q  A  L  Q  Y  Y  T  Y  Q  L  A  G  P  Y   : C  M  C  *  H  F  L  W  V  L  V  Q  S  P  A  S  C  C  Q  R  Y  F  L  A  G  L  E  Q  R  Q  W  L  Y  A  W  L  H  I  G :   S  *  I  F  W  S  A  F  C  F  C  R  C  L  S  I  L  D  H  K  *  F  M  R  S  L  Q  D  F  A  C  L  H  W  P  L  *  K  R  M  W  W  K  R  K  G  K  H  Y  R  R  L  S  L  P  F  F  H  L  I  S  W  *  L  D  H  T  L  Y  *  S  S  D  W  K  M  L  R  S  *  *  L  N  I  Q  I  L  C  Y  S  Y  F  L  I  C  T  I  S  E  C  V  H  R  Q  E  R  Q  Q  Q  *  T  I  K  I  K  I  V  T  K  R  V  F  I  G  Q  L  S  L  C  L  F  L  L  L  F  C  S  L  H  W  S  V  T  I  A  *  G  S  M  K  L  H  L  P  R  P  V  V  D  H  I  C  T  T  E  Y  L  L  L  L  S  L  Y  T  F  L  L  I  F  T  L  I  *  F  L  *  L  A  *  H  G  K  A  T  L  N  I  P  Y  R  N  N  V  T  D  F  E  L  A  R  Y  W  *  L  L  C  C  N  K  K  Y  W  *  Y  C  S  I  Q  L  I  N  V  S  *  D  F  S  :  N  Q  T  N  K  K  R  D </second_frame>
            <third_frame>   F  L  F  *  L  I  S  F  *  N  F  T  T  N  M  Q  *  L  V  P  H  K  T  F  Q  E  :  V  G  V  Y  D  W  D  F  C  Y  S  T  I  D  Q  I  T  Q  Y  E  R  W  W  S  C  R  C  L  L  H  V  Q  A  C  I  N  *  R  P  V  H  *  L  *  R  *  R  R  K  S  R :   S  C  R  K  W  C  V  E  R  N  W  K  P  L  M  E  A  A  V  A  T  Y  T  G  G  N  Y  F  I  T  L  V  W  L  P  S  W  :  G  G  *  *  H  S  R  K  H  V  F  G  P  *  L  Q  W  Q  H  L  G  G  R :   S  S  C  E  Y  M  F  G  R  C  S  F  G  L  Y  I  Q  W  L  D  S  R  W  G  W  S  S  E  R  L  S  T  V  C  S  T  N  D  Y  R  C  F  Y  E  :  C  R  N  Q  Y  S  W  S  Y  A  S  W  K  V  I  C  W  N  R  D  G  P  W  P  C  C  C  C  S  L  C  C  R   : G  F  T  S  F  C  *  R  H  L  W  E  F  H  S  D  R  H  M  P  W  A  P  G  I  S  S  H  W  N  S  C  Q  G  Y  C  W  L  :  V  A  S  L  L  L  D  I  H  H  S  C  C  N  T  C  C  F  D  G  I  L  C  R  E  S  S  L  A  C  *   : E  R  K  N  *  F  S  *  R  R  A  *  K  A  Y  G  S  T  T  C  *  I  C  H  C  R  N  V  K  D  R  Q  R  R  *  G  G  *  C  *  V  W  R  A  I  V  W  S  P  F  *  S :   G  F  H  W  I  C  L  I  C  F  A  T  T  I  W  N  K  C  C  I  L  F  L  F  N  C  V  *  E  G  W  S  T  Y  G  H  C  K  Y  M  C  W  D  C  K  L  N  R :   V  Y  Y  C  N  D  V  D  G  *  A  W  E  E  G  A  S  N  W  E  F  F  G  H   : G  S  R  N  R  S  S  S  S  S  C  E  F  I  C  T  K  L  C  S  I  I  P  I  S  W  R  D  P  T  :  V  C  V  S  I  F  F  G  C  W  S  S  P  Q  P  P  A  V  R  D  I  S  W  P  D  *  S  K  G  N  G  F  M  H  G  C  T  L   : G  H  K  F  F  G  R  P  S  V  S  A  D  A  *  A  S  W  T  T  N  S  L  C  D  L  C  R  I  L  L  V  C  T  G  L  C  E  K  E  C  G  G  N  E  R  E  N  I  T  G  D  *  V  C  P  S  S  I  S  L  V  G  D  *  I  T  L  Y  T  K  V  Q  I  G  K  C  *  G  P  S  D  *  T  S  K  F  F  A  I  A  I  S  *  F  V  Q  F  R  S  V  F  I  G  R  K  G  S  N  N  E  Q  S  R  *  R  L  S  Q  S  E  F  S  *  G  N  C  H  S  A  Y  F  C  C  F  F  A  H  S  T  G  R  *  L  L  P  E  G  A  *  N  C  I  C  L  G  Q  *  *  I  T  Y  V  L  Q  S  T  Y  C  C  Y  L  C  I  P  F  F  *  F  L  P  *  S  D  F  C  N  *  H  D  T  E  R  L  L  *  T  F  L  T  E  I  M  L  Q  I  L  N  *  Q  D  T  G  S  C  S  A  V  T  R  N  I  G  S  I  V  V  Y  N  *  L  M  L  A  E  I  F  Q :   I  K  Q  T  K  K  G   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C00HBa0081D06.1" strand="+"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="82056" stop="82167"/>
                    <exon start="82607" stop="82718"/>
                    <exon start="82842" stop="82909"/>
                    <exon start="83244" stop="83376"/>
                    <exon start="83782" stop="83881"/>
                    <exon start="83946" stop="84058"/>
                    <exon start="84316" stop="84409"/>
                    <exon start="85766" stop="85919"/>
                    <exon start="86008" stop="86151"/>
                    <exon start="86243" stop="86316"/>
                    <exon start="86428" stop="86516"/>
                    <exon start="86915" stop="87029"/>
                    <exon start="88306" stop="88488"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1488</number_coding_nucleotides>
                  <number_encoded_amino_acids>496</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IRSHNMRGGGLADAYSMYKRASTKDQFTDYEDREENLDRAENGVWKEIGNPSWKRPLPHILVAIISSLLFGYHLGVVNDTLESMSLDLDFSGSTLAEGLVVSTCLGGALLGSIFSGWIADGVGRRRGFQLCALPMIIGASMSAATSTLGVMLLGRLFVGIGMGLGPAVAALYVAEVSPAFVRGTYGSFTQIATCLGLLGSLLIGIPAKDTAGWWRVCFWISTIPAAILAVLMEFCAESPHWLVKRGRIDLAEEELEKLMGAPHVKYAIAEMSKTDKGDEVDNVRFGELLYGRHFKVVFIGSALFALQQLSGINAVFYFSSTVFKKAGVPTDTANTCVGIVNLTGSIIAMMLMDRLGRKVLLIGSFLGMAVATGLQVAAASSFVPSFAVLYLSVGGTLLYVLAFSLGAGPVPSLLLSEIFPGRIRAKAMALCMAAHWVINFLVGLLFLPMLEHLGPQIVYAIFAGFCLFALAFVKKNVVETKGKTLQEIEFALLPSH*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C00HBa0081D06.1" strand="+"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="88615" stop="88911"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>294</number_coding_nucleotides>
                  <number_encoded_amino_acids>98</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>AGKAATMNNQDKDCHKASFHRAIVTLLIFAAFLLTPLVGDYCLREHETASASASSRSHMYYRVPIVVIFVYLSFNFYLDLIFVISMTRKGYSKHSLQK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="+" PGL_start="90047" PGL_stop="96924"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="90047" e_stop="90247"/>
            <exon e_start="90676" e_stop="90747"/>
            <exon e_start="90858" e_stop="91070"/>
            <exon e_start="96666" e_stop="96924"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.894" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.610" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.992" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="0.981"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="90047" e_stop="90247" e_length="201"/>
          </exon>
          <intron i_serial="1" don_prob="0.894" acc_prob="0.993">
            <gDNA_intron_boundary i_start="90248" i_stop="90675" i_length="428"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="90676" e_stop="90747" e_length="72"/>
          </exon>
          <intron i_serial="2" don_prob="0.610" acc_prob="0.996">
            <gDNA_intron_boundary i_start="90748" i_stop="90857" i_length="110"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="90858" e_stop="91070" e_length="213"/>
          </exon>
          <intron i_serial="3" don_prob="0.992" acc_prob="0.999">
            <gDNA_intron_boundary i_start="91071" i_stop="96665" i_length="5595"/>
          </intron>
          <exon e_serial="4" e_score="0.981">
            <gDNA_exon_boundary e_start="96666" e_stop="96924" e_length="259"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90047" stop="90247"/>
              <exon start="90676" stop="90747"/>
              <exon start="90858" stop="91070"/>
              <exon start="96666" stop="96924"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U324141" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATACTATTTGGATAACAATGGGAAGAGTTGAAGCAAACAATGAAGGAGAAACATCTCAGGCAGAGAGTGGTACTGAACCAGCTGCCTCACAGCCTCAACAGTTCCAAGGAGTACAAAGTGTGTATCAGTCACCATCACACTTAACAATTGGAGCTCCTTGGAGTACTGGCTTATTTGATTGTCATCTGGACCAAACTAATG : CTGTCATGACGGCGTTCTTACCTTGTGTAACATTTGGACAAATAGCAGAAGTCCTTGATGCAGGACAAATGA : CATGCCCTTTGGGGACTTTCATATACATGCTGATGATGCCTGCTGTCTGCTCTCAGTGGATCATGGGCTCAAAATATAGAACCCAATTGAGACAAAGATATAATCTAGTGGAAGCTCCTTATTCAGACATGATTTCCCATATGTTCTGTCCATGTTGCTCTCTTTGTCAAGAATTCAGAGAGCTTCGAAACAGGGGACTTGATCCCGCTCTAG : GGTGGAATGGTATAGTTGCTCAGCGACACTATGGGAACCAACAAGTGAATCAAGCTCCTCAAGTACAATCCATGTCAATGTAAAAATTCAAGATTGTGATTCTTTATTTGTTTGATTTGAGGTTGTGGTGTGTTAGTAAAAACCAGATTCTGTTCATGTTTGAAGTTGTATCCTTAAAACTCAACCATATTGTTGGCTGTGTTAGTTGTTTGAACTATGTTTTTACAACCCCAATTCGAGTTAGATTATAAACAATGCC</gDNA_template>
            <first_frame> I  L  F  G  *  Q  W  E  E  L  K  Q  T  M  K  E  K  H  L  R  Q  R  V  V  L  N  Q  L  P  H  S  L  N  S  S  K  E  Y  K  V  C  I  S  H  H  H  T  *  Q  L  E  L  L  G  V  L  A  Y  L  I  V  I  W  T  K  L  M  :  L  S  *  R  R  S  Y  L  V  *  H  L  D  K  *  Q  K  S  L  M  Q  D  K  *  :  H  A  L  W  G  L  S  Y  T  C  *  *  C  L  L  S  A  L  S  G  S  W  A  Q  N  I  E  P  N  *  D  K  D  I  I  *  W  K  L  L  I  Q  T  *  F  P  I  C  S  V  H  V  A  L  F  V  K  N  S  E  S  F  E  T  G  D  L  I  P  L  *  :  G  G  M  V  *  L  L  S  D  T  M  G  T  N  K  *  I  K  L  L  K  Y  N  P  C  Q  C  K  N  S  R  L  *  F  F  I  C  L  I  *  G  C  G  V  L  V  K  T  R  F  C  S  C  L  K  L  Y  P  *  N  S  T  I  L  L  A  V  L  V  V  *  T  M  F  L  Q  P  Q  F  E  L  D  Y  K  Q  C  </first_frame>
            <second_frame>  Y  Y  L  D  N  N  G  K  S  *  S  K  Q  *  R  R  N  I  S  G  R  E  W  Y  *  T  S  C  L  T  A  S  T  V  P  R  S  T  K  C  V  S  V  T  I  T  L  N  N  W  S  S  L  E  Y  W  L  I  *  L  S  S  G  P  N  *  C :   C  H  D  G  V  L  T  L  C  N  I  W  T  N  S  R  S  P  *  C  R  T  N  D :   M  P  F  G  D  F  H  I  H  A  D  D  A  C  C  L  L  S  V  D  H  G  L  K  I  *  N  P  I  E  T  K  I  *  S  S  G  S  S  L  F  R  H  D  F  P  Y  V  L  S  M  L  L  S  L  S  R  I  Q  R  A  S  K  Q  G  T  *  S  R  S  R :   V  E  W  Y  S  C  S  A  T  L  W  E  P  T  S  E  S  S  S  S  S  T  I  H  V  N  V  K  I  Q  D  C  D  S  L  F  V  *  F  E  V  V  V  C  *  *  K  P  D  S  V  H  V  *  S  C  I  L  K  T  Q  P  Y  C  W  L  C  *  L  F  E  L  C  F  Y  N  P  N  S  S  *  I  I  N  N  A </second_frame>
            <third_frame>   T  I  W  I  T  M  G  R  V  E  A  N  N  E  G  E  T  S  Q  A  E  S  G  T  E  P  A  A  S  Q  P  Q  Q  F  Q  G  V  Q  S  V  Y  Q  S  P  S  H  L  T  I  G  A  P  W  S  T  G  L  F  D  C  H  L  D  Q  T  N   : A  V  M  T  A  F  L  P  C  V  T  F  G  Q  I  A  E  V  L  D  A  G  Q  M   : T  C  P  L  G  T  F  I  Y  M  L  M  M  P  A  V  C  S  Q  W  I  M  G  S  K  Y  R  T  Q  L  R  Q  R  Y  N  L  V  E  A  P  Y  S  D  M  I  S  H  M  F  C  P  C  C  S  L  C  Q  E  F  R  E  L  R  N  R  G  L  D  P  A  L   : G  W  N  G  I  V  A  Q  R  H  Y  G  N  Q  Q  V  N  Q  A  P  Q  V  Q  S  M  S  M  *  K  F  K  I  V  I  L  Y  L  F  D  L  R  L  W  C  V  S  K  N  Q  I  L  F  M  F  E  V  V  S  L  K  L  N  H  I  V  G  C  V  S  C  L  N  Y  V  F  T  T  P  I  R  V  R  L  *  T  M   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C00HBa0081D06.1" strand="+"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="90049" stop="90247"/>
                    <exon start="90676" stop="90747"/>
                    <exon start="90858" stop="91070"/>
                    <exon start="96666" stop="96748"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>564</number_coding_nucleotides>
                  <number_encoded_amino_acids>188</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TIWITMGRVEANNEGETSQAESGTEPAASQPQQFQGVQSVYQSPSHLTIGAPWSTGLFDCHLDQTNAVMTAFLPCVTFGQIAEVLDAGQMTCPLGTFIYMLMMPAVCSQWIMGSKYRTQLRQRYNLVEAPYSDMISHMFCPCCSLCQEFRELRNRGLDPALGWNGIVAQRHYGNQQVNQAPQVQSMSM*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="-" PGL_start="102820" PGL_stop="100727"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="102820" e_stop="102755"/>
            <exon e_start="102260" e_stop="102192"/>
            <exon e_start="101204" e_stop="100727"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.993" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.937" e_score="1.000"/>
          <exon-only e_score="0.990"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="102820" e_stop="102755" e_length="66"/>
          </exon>
          <intron i_serial="1" don_prob="0.993" acc_prob="1.000">
            <gDNA_intron_boundary i_start="102754" i_stop="102261" i_length="494"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="102260" e_stop="102192" e_length="69"/>
          </exon>
          <intron i_serial="2" don_prob="0.994" acc_prob="0.937">
            <gDNA_intron_boundary i_start="102191" i_stop="101205" i_length="987"/>
          </intron>
          <exon e_serial="3" e_score="0.990">
            <gDNA_exon_boundary e_start="101204" e_stop="100727" e_length="478"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102820" stop="102755"/>
              <exon start="102260" stop="102192"/>
              <exon start="101204" stop="100727"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U346360" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ACTGATACAGCCTCCGTCCTATCAGAAGCTATTGGCTACATCAGATTCCTTCAGGCTCAAATTCAG : GCATTAAGCTCACCATACTTGGGCAATGCATCAGGAAGCATGGGTCACATTCCCCAACAATCACTGAAT : GATTCTCAGCACAAACCGATGGATTTAAGGAGTAGAGGGTTGTGCTTGGTTCCTATTTCTTGCATGGCAAATATAGGAAGTGATACCGGCGCCGATTATTGGGCTCCAGCTCTCGGAGGAGGATTTTGATGTTACGAGCTGATTGGATTTTAAGTTATATACACTGACAGTGTAAAAATACTGAGACGACAACAAACTGATGATAAGACGTATCGGAGCCTCTGTGTCCTCATGGAATGAATGATATAACATCACAAAGCAGTCATTCTCAGTATGAAAGTCAGAGCTGACTGTTTGTGATGCTATTTTGCATTTGAAATCGGGTCAATGATAAAGTGGTATTTTCCAATGTACAATATGGTCCTATTTTCTTGAATTTCATGAATAATCTTACTACCTTACAAGGTAGTTCATAACTGTTGTATATGTAACTTGGAAATCCATAGGTACAATCAACATATCGTTTCGAAAATTTTAT</gDNA_template>
            <first_frame> T  D  T  A  S  V  L  S  E  A  I  G  Y  I  R  F  L  Q  A  Q  I  Q  :  A  L  S  S  P  Y  L  G  N  A  S  G  S  M  G  H  I  P  Q  Q  S  L  N  :  D  S  Q  H  K  P  M  D  L  R  S  R  G  L  C  L  V  P  I  S  C  M  A  N  I  G  S  D  T  G  A  D  Y  W  A  P  A  L  G  G  G  F  *  C  Y  E  L  I  G  F  *  V  I  Y  T  D  S  V  K  I  L  R  R  Q  Q  T  D  D  K  T  Y  R  S  L  C  V  L  M  E  *  M  I  *  H  H  K  A  V  I  L  S  M  K  V  R  A  D  C  L  *  C  Y  F  A  F  E  I  G  S  M  I  K  W  Y  F  P  M  Y  N  M  V  L  F  S  *  I  S  *  I  I  L  L  P  Y  K  V  V  H  N  C  C  I  C  N  L  E  I  H  R  Y  N  Q  H  I  V  S  K  I  L  </first_frame>
            <second_frame>  L  I  Q  P  P  S  Y  Q  K  L  L  A  T  S  D  S  F  R  L  K  F  R :   H  *  A  H  H  T  W  A  M  H  Q  E  A  W  V  T  F  P  N  N  H  *  M :   I  L  S  T  N  R  W  I  *  G  V  E  G  C  A  W  F  L  F  L  A  W  Q  I  *  E  V  I  P  A  P  I  I  G  L  Q  L  S  E  E  D  F  D  V  T  S  *  L  D  F  K  L  Y  T  L  T  V  *  K  Y  *  D  D  N  K  L  M  I  R  R  I  G  A  S  V  S  S  W  N  E  *  Y  N  I  T  K  Q  S  F  S  V  *  K  S  E  L  T  V  C  D  A  I  L  H  L  K  S  G  Q  *  *  S  G  I  F  Q  C  T  I  W  S  Y  F  L  E  F  H  E  *  S  Y  Y  L  T  R  *  F  I  T  V  V  Y  V  T  W  K  S  I  G  T  I  N  I  S  F  R  K  F  Y </second_frame>
            <third_frame>   *  Y  S  L  R  P  I  R  S  Y  W  L  H  Q  I  P  S  G  S  N  S   : G  I  K  L  T  I  L  G  Q  C  I  R  K  H  G  S  H  S  P  T  I  T  E   : *  F  S  A  Q  T  D  G  F  K  E  *  R  V  V  L  G  S  Y  F  L  H  G  K  Y  R  K  *  Y  R  R  R  L  L  G  S  S  S  R  R  R  I  L  M  L  R  A  D  W  I  L  S  Y  I  H  *  Q  C  K  N  T  E  T  T  T  N  *  *  *  D  V  S  E  P  L  C  P  H  G  M  N  D  I  T  S  Q  S  S  H  S  Q  Y  E  S  Q  S  *  L  F  V  M  L  F  C  I  *  N  R  V  N  D  K  V  V  F  S  N  V  Q  Y  G  P  I  F  L  N  F  M  N  N  L  T  T  L  Q  G  S  S  *  L  L  Y  M  *  L  G  N  P  *  V  Q  S  T  Y  R  F  E  N  F   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C00HBa0081D06.1" strand="-"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="102820" stop="102755"/>
                    <exon start="102260" stop="102192"/>
                    <exon start="101204" stop="101076"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>261</number_coding_nucleotides>
                  <number_encoded_amino_acids>87</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TDTASVLSEAIGYIRFLQAQIQALSSPYLGNASGSMGHIPQQSLNDSQHKPMDLRSRGLCLVPISCMANIGSDTGADYWAPALGGGF*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="13" PGL_strand="-" PGL_start="105207" PGL_stop="104321"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="105207" e_stop="104946"/>
            <exon e_start="104575" e_stop="104321"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.992" acc_prob="0.983" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="105207" e_stop="104946" e_length="262"/>
          </exon>
          <intron i_serial="1" don_prob="0.992" acc_prob="0.983">
            <gDNA_intron_boundary i_start="104945" i_stop="104576" i_length="370"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="104575" e_stop="104321" e_length="255"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="105207" stop="104946"/>
              <exon start="104575" stop="104321"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U341033" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AGAGATACAGGAGAAGAAAGATTGCAAAATTTGTGTTGAGAGAAGAGGGTGAAGAATAATCATTAGTCGAGTAGCAAATGATGGCTGGAAACCCTACTAATTGGTGGAGCATGATCATGAATGGAAACATGCATCCACAATTATCTCATGATCATGATCAACATAATTCTTCTTCTTCTAATTCTAATTCTAATTCTTCACATTTTTATGGAGCTCATAATCCAAATCAAGATTTTCCTCGTTCATTGAGCCAACTTCTTAT : GAATGGATTTTGTGGTGATGAAGAAAAGTTTGGTATTAGTCCTTTTCATGCCGCCGGGAATTCGGAAGACCAAAGTTTGAATTCCGTCCATCCAACATCATCAACAGCTAATTTTAGGGTTCCTGTTGCTGATGTAAAGCCAGAATTGTATCATCATCATCATGGCCACAACGAATTTCAAACATCTTCATCGCTACAAGAAAAACTCGAATTAGATACTGATCATTTTACCAGGCCTTTAATTGCTTCTAATTG</gDNA_template>
            <first_frame> R  D  T  G  E  E  R  L  Q  N  L  C  *  E  K  R  V  K  N  N  H  *  S  S  S  K  *  W  L  E  T  L  L  I  G  G  A  *  S  *  M  E  T  C  I  H  N  Y  L  M  I  M  I  N  I  I  L  L  L  L  I  L  I  L  I  L  H  I  F  M  E  L  I  I  Q  I  K  I  F  L  V  H  *  A  N  F  L   : *  M  D  F  V  V  M  K  K  S  L  V  L  V  L  F  M  P  P  G  I  R  K  T  K  V  *  I  P  S  I  Q  H  H  Q  Q  L  I  L  G  F  L  L  L  M  *  S  Q  N  C  I  I  I  I  M  A  T  T  N  F  K  H  L  H  R  Y  K  K  N  S  N  *  I  L  I  I  L  P  G  L  *  L  L  L  I  </first_frame>
            <second_frame>  E  I  Q  E  K  K  D  C  K  I  C  V  E  R  R  G  *  R  I  I  I  S  R  V  A  N  D  G  W  K  P  Y  *  L  V  E  H  D  H  E  W  K  H  A  S  T  I  I  S  *  S  *  S  T  *  F  F  F  F  *  F  *  F  *  F  F  T  F  L  W  S  S  *  S  K  S  R  F  S  S  F  I  E  P  T  S  Y  :  E  W  I  L  W  *  *  R  K  V  W  Y  *  S  F  S  C  R  R  E  F  G  R  P  K  F  E  F  R  P  S  N  I  I  N  S  *  F  *  G  S  C  C  *  C  K  A  R  I  V  S  S  S  S  W  P  Q  R  I  S  N  I  F  I  A  T  R  K  T  R  I  R  Y  *  S  F  Y  Q  A  F  N  C  F  *  L </second_frame>
            <third_frame>   R  Y  R  R  R  K  I  A  K  F  V  L  R  E  E  G  E  E  *  S  L  V  E  *  Q  M  M  A  G  N  P  T  N  W  W  S  M  I  M  N  G  N  M  H  P  Q  L  S  H  D  H  D  Q  H  N  S  S  S  S  N  S  N  S  N  S  S  H  F  Y  G  A  H  N  P  N  Q  D  F  P  R  S  L  S  Q  L  L  M :   N  G  F  C  G  D  E  E  K  F  G  I  S  P  F  H  A  A  G  N  S  E  D  Q  S  L  N  S  V  H  P  T  S  S  T  A  N  F  R  V  P  V  A  D  V  K  P  E  L  Y  H  H  H  H  G  H  N  E  F  Q  T  S  S  S  L  Q  E  K  L  E  L  D  T  D  H  F  T  R  P  L  I  A  S  N   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C00HBa0081D06.1" strand="-"/>
                <serials PGL_serial="13" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="105133" stop="104946"/>
                    <exon start="104575" stop="104323"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>441</number_coding_nucleotides>
                  <number_encoded_amino_acids>147</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QMMAGNPTNWWSMIMNGNMHPQLSHDHDQHNSSSSNSNSNSSHFYGAHNPNQDFPRSLSQLLMNGFCGDEEKFGISPFHAAGNSEDQSLNSVHPTSSTANFRVPVADVKPELYHHHHGHNEFQTSSSLQEKLELDTDHFTRPLIASN</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="14" PGL_strand="-" PGL_start="115370" PGL_stop="108423"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="115370" e_stop="115073"/>
            <exon e_start="114271" e_stop="114158"/>
            <exon e_start="114051" e_stop="113898"/>
            <exon e_start="113052" e_stop="112916"/>
            <exon e_start="111134" e_stop="111034"/>
            <exon e_start="110234" e_stop="110117"/>
            <exon e_start="109845" e_stop="109679"/>
            <exon e_start="109124" e_stop="108769"/>
            <exon e_start="108440" e_stop="108423"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.968" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.964" e_score="1.000"/>
          <exon-intron don_prob="0.983" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.963" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.984" acc_prob="0.984" e_score="1.000"/>
          <exon-intron don_prob="0.230" acc_prob="0.857" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.967" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.361" e_score="1.000"/>
          <exon-only e_score="0.722"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="115370" e_stop="115073" e_length="298"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.968">
            <gDNA_intron_boundary i_start="115072" i_stop="114272" i_length="801"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="114271" e_stop="114158" e_length="114"/>
          </exon>
          <intron i_serial="2" don_prob="0.994" acc_prob="0.964">
            <gDNA_intron_boundary i_start="114157" i_stop="114052" i_length="106"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="114051" e_stop="113898" e_length="154"/>
          </exon>
          <intron i_serial="3" don_prob="0.983" acc_prob="0.994">
            <gDNA_intron_boundary i_start="113897" i_stop="113053" i_length="845"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="113052" e_stop="112916" e_length="137"/>
          </exon>
          <intron i_serial="4" don_prob="0.963" acc_prob="0.993">
            <gDNA_intron_boundary i_start="112915" i_stop="111135" i_length="1781"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="111134" e_stop="111034" e_length="101"/>
          </exon>
          <intron i_serial="5" don_prob="0.984" acc_prob="0.984">
            <gDNA_intron_boundary i_start="111033" i_stop="110235" i_length="799"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="110234" e_stop="110117" e_length="118"/>
          </exon>
          <intron i_serial="6" don_prob="0.230" acc_prob="0.857">
            <gDNA_intron_boundary i_start="110116" i_stop="109846" i_length="271"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="109845" e_stop="109679" e_length="167"/>
          </exon>
          <intron i_serial="7" don_prob="0.996" acc_prob="0.967">
            <gDNA_intron_boundary i_start="109678" i_stop="109125" i_length="554"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="109124" e_stop="108769" e_length="356"/>
          </exon>
          <intron i_serial="8" don_prob="0.000" acc_prob="0.361">
            <gDNA_intron_boundary i_start="108768" i_stop="108441" i_length="328"/>
          </intron>
          <exon e_serial="9" e_score="0.722">
            <gDNA_exon_boundary e_start="108440" e_stop="108423" e_length="18"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="115370" stop="115073"/>
              <exon start="114271" stop="114158"/>
              <exon start="114051" stop="113898"/>
              <exon start="113052" stop="112916"/>
              <exon start="111134" stop="111034"/>
              <exon start="110234" stop="110117"/>
              <exon start="109845" stop="109679"/>
              <exon start="109124" stop="108769"/>
              <exon start="108440" stop="108423"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U318362" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTGTGTCTCAAATTTGTCTGCGTGGTCAAGTCAGTGCTGAACTGAAAAGATTGCTCACCGGGGTTCCGGTACGCAATCGCCGCCGGCGACCACCAATTTCTTCATCGCATATCCCACTATAGTTAAAATTCATTGAATTATCTAGTACGGCCGAGATATGGACAGACAAAACCTAGCTTCATCCTCCGCTCCCCGTGGTGGTGCGACTGTCCATCCTCCCCCACAACACGATGCTTGGATCAATACTTACCGGAATTTGCATCCTCAATGGCAATCTCTTCTTCCTCCACCGCAACAG : TCAGCCATTCCAATATCAATATCCAGAGTTAATCAGGTAGATGCTGGAAGACTGGACATTGAAATGTCAGCCATGCTAAAAGAGCAGTTGGTTAAGGTCTTTTCTTTGATGAAG : CCAGGAATGTTATTTCAATATGAACCAGAACTTGATGCTTTTCTTGAGTTTCTAATCTGGCGATTTTCTATCTGGGTTGATAAGCCTACTCCTGGTAATGCTCTCATGAATCTGAGATACAGAGATGAACGTGCAAGTGAGATTAGAGGAAAAG : TGAGGACTGGATTAGAGGGACCAGGACTTACTGTTGCTCAAAAGATATGGTACTGTGTTGCAACAGTTGGTGGTCAATATATATGGGCTCGTCTACAATCATTTTCTGCTTTTCGGAGATGGGGTGACTCTGAGCAG : AGGTCCTTGGCACGTGGAGTGTGGTTGTTAATGCAACGGATGGAGGGTATCTATAAAGCAGCATCTTTTAGCAATTTACTTCTCTTTCTTTACACAGGAAG : GTTCAGGAATCTCATTGAAAGAGCTTTAAGAGCTAGACTTGTTTATGGGAGCCCAAATATGAACAGAGCTGTGAGCTTTGAGTACATGAATCGTCAGTTGGTCTGGAATGAATTCTCG : GAACTGCTGCTCTTGCTTCTTCCCCTTCTCAATTCAGCATCTGTCAAGAGTTTCCTTCGTCCATTCTCAAAGGACAAATCTTCAGATTCTTCAGTAGATGAAACTTTATGCCCCATCTGCCAGGGAACCCCATCAATTCCATTTGTAGCTATCCCTTGTCAGCATAG : GTACTGTTACTACTGTCTTCAAACAAGGTGCTCTGCATCTTCATCGTTTCGTTGCCCCAGATGTGGTGAACCAGTTGCTGCTATGCAACGGCATGGTGGTTTAGTCAGCAACATTCCTCAGAAACAATGATTGTTCTGCAAAGTGATTGAAATGATAAAAAAAAGGGAAGCTAAGTTAAACTATAGATCAAAAGTTGCTCAAAAGACAACTTGACAATGAAACTAGGTATCTAGATTCCTTAATAAAGCTTATTGTTCTGCTTTATTGAGTGCTTTAATTTTTTAATAGTGTGGTTGTCCCTTTTCCTGTATTTTACATCTCATTTGTTTATTTAATTGAAAGATAATTTTCTCAA : ACTAAAAAAAATAGGATC</gDNA_template>
            <first_frame> L  C  L  K  F  V  C  V  V  K  S  V  L  N  *  K  D  C  S  P  G  F  R  Y  A  I  A  A  G  D  H  Q  F  L  H  R  I  S  H  Y  S  *  N  S  L  N  Y  L  V  R  P  R  Y  G  Q  T  K  P  S  F  I  L  R  S  P  W  W  C  D  C  P  S  S  P  T  T  R  C  L  D  Q  Y  L  P  E  F  A  S  S  M  A  I  S  S  S  S  T  A  T   : V  S  H  S  N  I  N  I  Q  S  *  S  G  R  C  W  K  T  G  H  *  N  V  S  H  A  K  R  A  V  G  *  G  L  F  F  D  E   : A  R  N  V  I  S  I  *  T  R  T  *  C  F  S  *  V  S  N  L  A  I  F  Y  L  G  *  *  A  Y  S  W  *  C  S  H  E  S  E  I  Q  R  *  T  C  K  *  D  *  R  K  S :   E  D  W  I  R  G  T  R  T  Y  C  C  S  K  D  M  V  L  C  C  N  S  W  W  S  I  Y  M  G  S  S  T  I  I  F  C  F  S  E  M  G  *  L  *  A   : E  V  L  G  T  W  S  V  V  V  N  A  T  D  G  G  Y  L  *  S  S  I  F  *  Q  F  T  S  L  S  L  H  R  K  :  V  Q  E  S  H  *  K  S  F  K  S  *  T  C  L  W  E  P  K  Y  E  Q  S  C  E  L  *  V  H  E  S  S  V  G  L  E  *  I  L   : G  T  A  A  L  A  S  S  P  S  Q  F  S  I  C  Q  E  F  P  S  S  I  L  K  G  Q  I  F  R  F  F  S  R  *  N  F  M  P  H  L  P  G  N  P  I  N  S  I  C  S  Y  P  L  S  A  *  :  V  L  L  L  L  S  S  N  K  V  L  C  I  F  I  V  S  L  P  Q  M  W  *  T  S  C  C  Y  A  T  A  W  W  F  S  Q  Q  H  S  S  E  T  M  I  V  L  Q  S  D  *  N  D  K  K  K  G  S  *  V  K  L  *  I  K  S  C  S  K  D  N  L  T  M  K  L  G  I  *  I  P  *  *  S  L  L  F  C  F  I  E  C  F  N  F  L  I  V  W  L  S  L  F  L  Y  F  T  S  H  L  F  I  *  L  K  D  N  F  L  K :   L  K  K  I  G   </first_frame>
            <second_frame>  C  V  S  N  L  S  A  W  S  S  Q  C  *  T  E  K  I  A  H  R  G  S  G  T  Q  S  P  P  A  T  T  N  F  F  I  A  Y  P  T  I  V  K  I  H  *  I  I  *  Y  G  R  D  M  D  R  Q  N  L  A  S  S  S  A  P  R  G  G  A  T  V  H  P  P  P  Q  H  D  A  W  I  N  T  Y  R  N  L  H  P  Q  W  Q  S  L  L  P  P  P  Q  Q  :  S  A  I  P  I  S  I  S  R  V  N  Q  V  D  A  G  R  L  D  I  E  M  S  A  M  L  K  E  Q  L  V  K  V  F  S  L  M  K  :  P  G  M  L  F  Q  Y  E  P  E  L  D  A  F  L  E  F  L  I  W  R  F  S  I  W  V  D  K  P  T  P  G  N  A  L  M  N  L  R  Y  R  D  E  R  A  S  E  I  R  G  K   : V  R  T  G  L  E  G  P  G  L  T  V  A  Q  K  I  W  Y  C  V  A  T  V  G  G  Q  Y  I  W  A  R  L  Q  S  F  S  A  F  R  R  W  G  D  S  E  Q  :  R  S  L  A  R  G  V  W  L  L  M  Q  R  M  E  G  I  Y  K  A  A  S  F  S  N  L  L  L  F  L  Y  T  G  R :   F  R  N  L  I  E  R  A  L  R  A  R  L  V  Y  G  S  P  N  M  N  R  A  V  S  F  E  Y  M  N  R  Q  L  V  W  N  E  F  S  :  E  L  L  L  L  L  L  P  L  L  N  S  A  S  V  K  S  F  L  R  P  F  S  K  D  K  S  S  D  S  S  V  D  E  T  L  C  P  I  C  Q  G  T  P  S  I  P  F  V  A  I  P  C  Q  H  R :   Y  C  Y  Y  C  L  Q  T  R  C  S  A  S  S  S  F  R  C  P  R  C  G  E  P  V  A  A  M  Q  R  H  G  G  L  V  S  N  I  P  Q  K  Q  *  L  F  C  K  V  I  E  M  I  K  K  R  E  A  K  L  N  Y  R  S  K  V  A  Q  K  T  T  *  Q  *  N  *  V  S  R  F  L  N  K  A  Y  C  S  A  L  L  S  A  L  I  F  *  *  C  G  C  P  F  S  C  I  L  H  L  I  C  L  F  N  *  K  I  I  F  S   : N  *  K  K  *  D  </second_frame>
            <third_frame>   V  S  Q  I  C  L  R  G  Q  V  S  A  E  L  K  R  L  L  T  G  V  P  V  R  N  R  R  R  R  P  P  I  S  S  S  H  I  P  L  *  L  K  F  I  E  L  S  S  T  A  E  I  W  T  D  K  T  *  L  H  P  P  L  P  V  V  V  R  L  S  I  L  P  H  N  T  M  L  G  S  I  L  T  G  I  C  I  L  N  G  N  L  F  F  L  H  R  N  S :   Q  P  F  Q  Y  Q  Y  P  E  L  I  R  *  M  L  E  D  W  T  L  K  C  Q  P  C  *  K  S  S  W  L  R  S  F  L  *  *  S :   Q  E  C  Y  F  N  M  N  Q  N  L  M  L  F  L  S  F  *  S  G  D  F  L  S  G  L  I  S  L  L  L  V  M  L  S  *  I  *  D  T  E  M  N  V  Q  V  R  L  E  E  K  :  *  G  L  D  *  R  D  Q  D  L  L  L  L  K  R  Y  G  T  V  L  Q  Q  L  V  V  N  I  Y  G  L  V  Y  N  H  F  L  L  F  G  D  G  V  T  L  S  R :   G  P  W  H  V  E  C  G  C  *  C  N  G  W  R  V  S  I  K  Q  H  L  L  A  I  Y  F  S  F  F  T  Q  E   : G  S  G  I  S  L  K  E  L  *  E  L  D  L  F  M  G  A  Q  I  *  T  E  L  *  A  L  S  T  *  I  V  S  W  S  G  M  N  S  R :   N  C  C  S  C  F  F  P  F  S  I  Q  H  L  S  R  V  S  F  V  H  S  Q  R  T  N  L  Q  I  L  Q  *  M  K  L  Y  A  P  S  A  R  E  P  H  Q  F  H  L  *  L  S  L  V  S  I   : G  T  V  T  T  V  F  K  Q  G  A  L  H  L  H  R  F  V  A  P  D  V  V  N  Q  L  L  L  C  N  G  M  V  V  *  S  A  T  F  L  R  N  N  D  C  S  A  K  *  L  K  *  *  K  K  G  K  L  S  *  T  I  D  Q  K  L  L  K  R  Q  L  D  N  E  T  R  Y  L  D  S  L  I  K  L  I  V  L  L  Y  *  V  L  *  F  F  N  S  V  V  V  P  F  P  V  F  Y  I  S  F  V  Y  L  I  E  R  *  F  S  Q  :  T  K  K  N  R  I </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C00HBa0081D06.1" strand="-"/>
                <serials PGL_serial="14" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="115225" stop="115073"/>
                    <exon start="114271" stop="114158"/>
                    <exon start="114051" stop="113898"/>
                    <exon start="113052" stop="112916"/>
                    <exon start="111134" stop="111034"/>
                    <exon start="110234" stop="110117"/>
                    <exon start="109845" stop="109679"/>
                    <exon start="109124" stop="108995"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1071</number_coding_nucleotides>
                  <number_encoded_amino_acids>357</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>YGRDMDRQNLASSSAPRGGATVHPPPQHDAWINTYRNLHPQWQSLLPPPQQSAIPISISRVNQVDAGRLDIEMSAMLKEQLVKVFSLMKPGMLFQYEPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDERASEIRGKVRTGLEGPGLTVAQKIWYCVATVGGQYIWARLQSFSAFRRWGDSEQRSLARGVWLLMQRMEGIYKAASFSNLLLFLYTGRFRNLIERALRARLVYGSPNMNRAVSFEYMNRQLVWNEFSELLLLLLPLLNSASVKSFLRPFSKDKSSDSSVDETLCPICQGTPSIPFVAIPCQHRYCYYCLQTRCSASSSFRCPRCGEPVAAMQRHGGLVSNIPQKQ*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="113220" e_stop="112921"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.997">
            <gDNA_exon_boundary e_start="113220" e_stop="112921" e_length="300"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="113220" stop="112921"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U336494" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GTGTATAATCAATCTGATTTGGAAGGATTGTCTTGGAAAATCTCCTTTGTCTTACTTTGTGTTTGAAGTGCTAAGGTTGACAGCTTGATGCAGTTTCATTTTTTCTTTCTTGCATCAACTGCTATAATTTCAGTTGTAGTTCTGTTTCCTTTTCCATGTTTTTTATAGTGAGGACTGGATTAGAGGGACCAGGACTTACTGTTGCTCAAAAGATATGGTACTGTGTTGCAACAGTTGGTGGTCAATATATATGGGCTCGTCTACAATCATTTTCTGCTTTTCGGAGATGGGGTGACTCTG</gDNA_template>
            <first_frame> V  Y  N  Q  S  D  L  E  G  L  S  W  K  I  S  F  V  L  L  C  V  *  S  A  K  V  D  S  L  M  Q  F  H  F  F  F  L  A  S  T  A  I  I  S  V  V  V  L  F  P  F  P  C  F  L  *  *  G  L  D  *  R  D  Q  D  L  L  L  L  K  R  Y  G  T  V  L  Q  Q  L  V  V  N  I  Y  G  L  V  Y  N  H  F  L  L  F  G  D  G  V  T  L </first_frame>
            <second_frame>  C  I  I  N  L  I  W  K  D  C  L  G  K  S  P  L  S  Y  F  V  F  E  V  L  R  L  T  A  *  C  S  F  I  F  S  F  L  H  Q  L  L  *  F  Q  L  *  F  C  F  L  F  H  V  F  Y  S  E  D  W  I  R  G  T  R  T  Y  C  C  S  K  D  M  V  L  C  C  N  S  W  W  S  I  Y  M  G  S  S  T  I  I  F  C  F  S  E  M  G  *  L   </second_frame>
            <third_frame>   V  *  S  I  *  F  G  R  I  V  L  E  N  L  L  C  L  T  L  C  L  K  C  *  G  *  Q  L  D  A  V  S  F  F  L  S  C  I  N  C  Y  N  F  S  C  S  S  V  S  F  S  M  F  F  I  V  R  T  G  L  E  G  P  G  L  T  V  A  Q  K  I  W  Y  C  V  A  T  V  G  G  Q  Y  I  W  A  R  L  Q  S  F  S  A  F  R  R  W  G  D  S  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C00HBa0081D06.1" strand="-"/>
                <serials PGL_serial="14" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="113140" stop="112922"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>219</number_coding_nucleotides>
                  <number_encoded_amino_acids>73</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QLDAVSFFLSCINCYNFSCSSVSFSMFFIVRTGLEGPGLTVAQKIWYCVATVGGQYIWARLQSFSAFRRWGDS</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="15" PGL_strand="+" PGL_start="119167" PGL_stop="120333"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="119167" e_stop="119327"/>
            <exon e_start="119674" e_stop="119924"/>
            <exon e_start="120062" e_stop="120333"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.985" e_score="1.000"/>
          <exon-intron don_prob="0.801" acc_prob="1.000" e_score="1.000"/>
          <exon-only e_score="0.993"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="119167" e_stop="119327" e_length="161"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.985">
            <gDNA_intron_boundary i_start="119328" i_stop="119673" i_length="346"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="119674" e_stop="119924" e_length="251"/>
          </exon>
          <intron i_serial="2" don_prob="0.801" acc_prob="1.000">
            <gDNA_intron_boundary i_start="119925" i_stop="120061" i_length="137"/>
          </intron>
          <exon e_serial="3" e_score="0.993">
            <gDNA_exon_boundary e_start="120062" e_stop="120333" e_length="272"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="119167" stop="119327"/>
              <exon start="119674" stop="119924"/>
              <exon start="120062" stop="120333"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U330809" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GTTTATTGCAGCGTTTAATTAATTTTAGTCTCAAAATGCCTTGTATAGCTTAGGACGTTTTGACGATTCGCTCAATTGTGGGTCTATTAAGGCCTATCTTGCTGAATTTATCTCCACCTTGCTTTTCGTCTTCGCCGGTGTTGGTTCTGCCATTGCCTACA : ATAAGTTGACAGCAGATGCTGCTCTTGATCCTGCCGGACTAGTTGCGGTAGCAGTTTGCCATGGATTTGCTCTCTTCGTGGCCGTTTCTATTGGTGCTAACATCTCCGGTGGTCACGTTAATCCCGCTGTTACTTTTGGTTTAGCTCTTGGAGGCCAAATTACCCTTCTCACCGGCCTGTTTTACTGGGTGGCTCAGCTTTTGGGCGCCATAGTTGCTTGCTGCCTCCTCAAGTTTGTTACCGGAGGATTG : ACTGTTCCAATCCACGGTGTGGCAGCTGGTGTAGGAGCTACTGAAGGAGTTGTAATGGAAATTATCATCACATTCGCGTTGGTGTACACTGTGTACGCCACAGCAGCTGACCCCAAGAAGGGATCATTGGGTACAATTGCACCTATTGCCATTGGTTTCATTGTTGGTGCTAACATTTTGGCTGCGGGCCCATTCTCCGGAGGTTCAATGAATCCAGCCCGTTCTTTTGGGCCTGCAGTTGTTAGTGGCAACTTCGCTGGTAACTGGATTTA</gDNA_template>
            <first_frame> V  Y  C  S  V  *  L  I  L  V  S  K  C  L  V  *  L  R  T  F  *  R  F  A  Q  L  W  V  Y  *  G  L  S  C  *  I  Y  L  H  L  A  F  R  L  R  R  C  W  F  C  H  C  L  Q :   *  V  D  S  R  C  C  S  *  S  C  R  T  S  C  G  S  S  L  P  W  I  C  S  L  R  G  R  F  Y  W  C  *  H  L  R  W  S  R  *  S  R  C  Y  F  W  F  S  S  W  R  P  N  Y  P  S  H  R  P  V  L  L  G  G  S  A  F  G  R  H  S  C  L  L  P  P  Q  V  C  Y  R  R  I   : D  C  S  N  P  R  C  G  S  W  C  R  S  Y  *  R  S  C  N  G  N  Y  H  H  I  R  V  G  V  H  C  V  R  H  S  S  *  P  Q  E  G  I  I  G  Y  N  C  T  Y  C  H  W  F  H  C  W  C  *  H  F  G  C  G  P  I  L  R  R  F  N  E  S  S  P  F  F  W  A  C  S  C  *  W  Q  L  R  W  *  L  D  L </first_frame>
            <second_frame>  F  I  A  A  F  N  *  F  *  S  Q  N  A  L  Y  S  L  G  R  F  D  D  S  L  N  C  G  S  I  K  A  Y  L  A  E  F  I  S  T  L  L  F  V  F  A  G  V  G  S  A  I  A  Y   : N  K  L  T  A  D  A  A  L  D  P  A  G  L  V  A  V  A  V  C  H  G  F  A  L  F  V  A  V  S  I  G  A  N  I  S  G  G  H  V  N  P  A  V  T  F  G  L  A  L  G  G  Q  I  T  L  L  T  G  L  F  Y  W  V  A  Q  L  L  G  A  I  V  A  C  C  L  L  K  F  V  T  G  G  L  :  T  V  P  I  H  G  V  A  A  G  V  G  A  T  E  G  V  V  M  E  I  I  I  T  F  A  L  V  Y  T  V  Y  A  T  A  A  D  P  K  K  G  S  L  G  T  I  A  P  I  A  I  G  F  I  V  G  A  N  I  L  A  A  G  P  F  S  G  G  S  M  N  P  A  R  S  F  G  P  A  V  V  S  G  N  F  A  G  N  W  I   </second_frame>
            <third_frame>   L  L  Q  R  L  I  N  F  S  L  K  M  P  C  I  A  *  D  V  L  T  I  R  S  I  V  G  L  L  R  P  I  L  L  N  L  S  P  P  C  F  S  S  S  P  V  L  V  L  P  L  P  T  :  I  S  *  Q  Q  M  L  L  L  I  L  P  D  *  L  R  *  Q  F  A  M  D  L  L  S  S  W  P  F  L  L  V  L  T  S  P  V  V  T  L  I  P  L  L  L  L  V  *  L  L  E  A  K  L  P  F  S  P  A  C  F  T  G  W  L  S  F  W  A  P  *  L  L  A  A  S  S  S  L  L  P  E  D  * :   L  F  Q  S  T  V  W  Q  L  V  *  E  L  L  K  E  L  *  W  K  L  S  S  H  S  R  W  C  T  L  C  T  P  Q  Q  L  T  P  R  R  D  H  W  V  Q  L  H  L  L  P  L  V  S  L  L  V  L  T  F  W  L  R  A  H  S  P  E  V  Q  *  I  Q  P  V  L  L  G  L  Q  L  L  V  A  T  S  L  V  T  G  F  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C00HBa0081D06.1" strand="+"/>
                <serials PGL_serial="15" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="119195" stop="119327"/>
                    <exon start="119674" stop="119924"/>
                    <exon start="120062" stop="120331"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>654</number_coding_nucleotides>
                  <number_encoded_amino_acids>218</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SQNALYSLGRFDDSLNCGSIKAYLAEFISTLLFVFAGVGSAIAYNKLTADAALDPAGLVAVAVCHGFALFVAVSIGANISGGHVNPAVTFGLALGGQITLLTGLFYWVAQLLGAIVACCLLKFVTGGLTVPIHGVAAGVGATEGVVMEIIITFALVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVSGNFAGNWI</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="16" PGL_strand="-" PGL_start="123672" PGL_stop="121800"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="123672" e_stop="123643"/>
            <exon e_start="123564" e_stop="123429"/>
            <exon e_start="123186" e_stop="123064"/>
            <exon e_start="122983" e_stop="122813"/>
            <exon e_start="122450" e_stop="122391"/>
            <exon e_start="122314" e_stop="121800"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.452" acc_prob="0.033" e_score="1.000"/>
          <exon-intron don_prob="0.948" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.093" acc_prob="0.774" e_score="1.000"/>
          <exon-intron don_prob="0.741" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.805" e_score="1.000"/>
          <exon-only e_score="0.994"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="123672" e_stop="123643" e_length="30"/>
          </exon>
          <intron i_serial="1" don_prob="0.452" acc_prob="0.033">
            <gDNA_intron_boundary i_start="123642" i_stop="123565" i_length="78"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="123564" e_stop="123429" e_length="136"/>
          </exon>
          <intron i_serial="2" don_prob="0.948" acc_prob="0.992">
            <gDNA_intron_boundary i_start="123428" i_stop="123187" i_length="242"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="123186" e_stop="123064" e_length="123"/>
          </exon>
          <intron i_serial="3" don_prob="0.093" acc_prob="0.774">
            <gDNA_intron_boundary i_start="123063" i_stop="122984" i_length="80"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="122983" e_stop="122813" e_length="171"/>
          </exon>
          <intron i_serial="4" don_prob="0.741" acc_prob="0.996">
            <gDNA_intron_boundary i_start="122812" i_stop="122451" i_length="362"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="122450" e_stop="122391" e_length="60"/>
          </exon>
          <intron i_serial="5" don_prob="0.995" acc_prob="0.805">
            <gDNA_intron_boundary i_start="122390" i_stop="122315" i_length="76"/>
          </intron>
          <exon e_serial="6" e_score="0.994">
            <gDNA_exon_boundary e_start="122314" e_stop="121800" e_length="515"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="123672" stop="123643"/>
              <exon start="123564" stop="123429"/>
              <exon start="123186" stop="123064"/>
              <exon start="122983" stop="122813"/>
              <exon start="122450" stop="122391"/>
              <exon start="122314" stop="121800"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U325761" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="16" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GGACTACTGGGCAGCTTATGATAGAACTGG : AGAAGTGCAAAAATTTGCTGATAGAAGTGCATCTGATCAGGCAGCATCTTTGTTTAGTAAAGGTGGAATGGGTTCATCCATCATATTGGACGTGAAAGAGAAGCCAATATATCAATATAGATCCAGATTGAATCAG : GCCACCAGCTCTGCTGTGATGGACCCTGTGACACTGGTGGAGTCGGAATGCTCTACTGCACCCAAACCAATGCATGAAAATTTACTAAGAAAATCTACGACCAAGCTGATATCTGCAAGTGTT : GATTTCTGGATGGGTACTGAATTGCTCTTTACAGACGTATCGGATGCTTTAGAGCTACTTATAAAGCAGTTGAAAGGCCGTCAACTCACCAAAAGGGAGAGAAAGAAAATGAAGAGAACGCTGGGTGATATAGCTACCCTTGTTCCCATAACCATCTTAATGCTAATCCCT : GTTTCTGCAGTGGGTCATGCAGCAATGCTGGCGGCAATCAAGAAATATGTTCCAAGTTTG : ATTCCTTCTCCGTTTTCTTCTGAAAGGCTTGATCTAATGAAACAATTAAAGAGAACGAAGAAGAAAGAAGTCCAAGCTCGAAGCAGCATAGACAACCCTTCTTCTAAAGTTGTAGAGTGAATGCAAGCTGCGGGAAACAACCTTATTATCATGGTGTTGGTGCAGCTTAACTTCTGTAGAGTGGCAAGAGGCGTTGCACATATACCTTATAATAGCCAATGCAAGAAACTATCAGTAAGAGGAAACAGAAACAACGCTTTTTCACAAGCACATGTACACACAGATCCTGCTAAATTTAGTTCTAGAGAAAGCAACTTTGTTTTTGATCAACTGTATTTTCTCTAGGCGTCATCTGACAATTGTTCATATTTATCCATGGTTTAAAACGAAGCTTTCGAGTTCCTAAATTTCTAATTCTTGCAATCATCTGACTATTTTTCATATTTGTACAGTGTATACTTATGAGCTCTTAGTAGCATTTTCTTTTTACTGAGGAGCAGGTGGATGTTTTTAAA</gDNA_template>
            <first_frame> G  L  L  G  S  L  *  *  N  W  :  R  S  A  K  I  C  *  *  K  C  I  *  S  G  S  I  F  V  *  *  R  W  N  G  F  I  H  H  I  G  R  E  R  E  A  N  I  S  I  *  I  Q  I  E  S   : G  H  Q  L  C  C  D  G  P  C  D  T  G  G  V  G  M  L  Y  C  T  Q  T  N  A  *  K  F  T  K  K  I  Y  D  Q  A  D  I  C  K  C   : *  F  L  D  G  Y  *  I  A  L  Y  R  R  I  G  C  F  R  A  T  Y  K  A  V  E  R  P  S  T  H  Q  K  G  E  K  E  N  E  E  N  A  G  *  Y  S  Y  P  C  S  H  N  H  L  N  A  N  P   : C  F  C  S  G  S  C  S  N  A  G  G  N  Q  E  I  C  S  K  F   : D  S  F  S  V  F  F  *  K  A  *  S  N  E  T  I  K  E  N  E  E  E  R  S  P  S  S  K  Q  H  R  Q  P  F  F  *  S  C  R  V  N  A  S  C  G  K  Q  P  Y  Y  H  G  V  G  A  A  *  L  L  *  S  G  K  R  R  C  T  Y  T  L  *  *  P  M  Q  E  T  I  S  K  R  K  Q  K  Q  R  F  F  T  S  T  C  T  H  R  S  C  *  I  *  F  *  R  K  Q  L  C  F  *  S  T  V  F  S  L  G  V  I  *  Q  L  F  I  F  I  H  G  L  K  R  S  F  R  V  P  K  F  L  I  L  A  I  I  *  L  F  F  I  F  V  Q  C  I  L  M  S  S  *  *  H  F  L  F  T  E  E  Q  V  D  V  F  K </first_frame>
            <second_frame>  D  Y  W  A  A  Y  D  R  T  G :   E  V  Q  K  F  A  D  R  S  A  S  D  Q  A  A  S  L  F  S  K  G  G  M  G  S  S  I  I  L  D  V  K  E  K  P  I  Y  Q  Y  R  S  R  L  N  Q  :  A  T  S  S  A  V  M  D  P  V  T  L  V  E  S  E  C  S  T  A  P  K  P  M  H  E  N  L  L  R  K  S  T  T  K  L  I  S  A  S  V  :  D  F  W  M  G  T  E  L  L  F  T  D  V  S  D  A  L  E  L  L  I  K  Q  L  K  G  R  Q  L  T  K  R  E  R  K  K  M  K  R  T  L  G  D  I  A  T  L  V  P  I  T  I  L  M  L  I  P  :  V  S  A  V  G  H  A  A  M  L  A  A  I  K  K  Y  V  P  S  L  :  I  P  S  P  F  S  S  E  R  L  D  L  M  K  Q  L  K  R  T  K  K  K  E  V  Q  A  R  S  S  I  D  N  P  S  S  K  V  V  E  *  M  Q  A  A  G  N  N  L  I  I  M  V  L  V  Q  L  N  F  C  R  V  A  R  G  V  A  H  I  P  Y  N  S  Q  C  K  K  L  S  V  R  G  N  R  N  N  A  F  S  Q  A  H  V  H  T  D  P  A  K  F  S  S  R  E  S  N  F  V  F  D  Q  L  Y  F  L  *  A  S  S  D  N  C  S  Y  L  S  M  V  *  N  E  A  F  E  F  L  N  F  *  F  L  Q  S  S  D  Y  F  S  Y  L  Y  S  V  Y  L  *  A  L  S  S  I  F  F  L  L  R  S  R  W  M  F  L   </second_frame>
            <third_frame>   T  T  G  Q  L  M  I  E  L   : E  K  C  K  N  L  L  I  E  V  H  L  I  R  Q  H  L  C  L  V  K  V  E  W  V  H  P  S  Y  W  T  *  K  R  S  Q  Y  I  N  I  D  P  D  *  I  R :   P  P  A  L  L  *  W  T  L  *  H  W  W  S  R  N  A  L  L  H  P  N  Q  C  M  K  I  Y  *  E  N  L  R  P  S  *  Y  L  Q  V  L :   I  S  G  W  V  L  N  C  S  L  Q  T  Y  R  M  L  *  S  Y  L  *  S  S  *  K  A  V  N  S  P  K  G  R  E  R  K  *  R  E  R  W  V  I  *  L  P  L  F  P  *  P  S  *  C  *  S  L :   F  L  Q  W  V  M  Q  Q  C  W  R  Q  S  R  N  M  F  Q  V  * :   F  L  L  R  F  L  L  K  G  L  I  *  *  N  N  *  R  E  R  R  R  K  K  S  K  L  E  A  A  *  T  T  L  L  L  K  L  *  S  E  C  K  L  R  E  T  T  L  L  S  W  C  W  C  S  L  T  S  V  E  W  Q  E  A  L  H  I  Y  L  I  I  A  N  A  R  N  Y  Q  *  E  E  T  E  T  T  L  F  H  K  H  M  Y  T  Q  I  L  L  N  L  V  L  E  K  A  T  L  F  L  I  N  C  I  F  S  R  R  H  L  T  I  V  H  I  Y  P  W  F  K  T  K  L  S  S  S  *  I  S  N  S  C  N  H  L  T  I  F  H  I  C  T  V  Y  T  Y  E  L  L  V  A  F  S  F  Y  *  G  A  G  G  C  F  *  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C00HBa0081D06.1" strand="-"/>
                <serials PGL_serial="16" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="123671" stop="123643"/>
                    <exon start="123564" stop="123429"/>
                    <exon start="123186" stop="123064"/>
                    <exon start="122983" stop="122813"/>
                    <exon start="122450" stop="122391"/>
                    <exon start="122314" stop="122195"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>636</number_coding_nucleotides>
                  <number_encoded_amino_acids>212</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DYWAAYDRTGEVQKFADRSASDQAASLFSKGGMGSSIILDVKEKPIYQYRSRLNQATSSAVMDPVTLVESECSTAPKPMHENLLRKSTTKLISASVDFWMGTELLFTDVSDALELLIKQLKGRQLTKRERKKMKRTLGDIATLVPITILMLIPVSAVGHAAMLAAIKKYVPSLIPSPFSSERLDLMKQLKRTKKKEVQARSSIDNPSSKVVE*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C00HBa0081D06.1" strand="-"/>
                <serials PGL_serial="16" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="122194" stop="121970"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>222</number_coding_nucleotides>
                  <number_encoded_amino_acids>74</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>MQAAGNNLIIMVLVQLNFCRVARGVAHIPYNSQCKKLSVRGNRNNAFSQAHVHTDPAKFSSRESNFVFDQLYFL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 38 chains have been computed
$ 
$ memory statistics:
$ 494944 bytes spliced alignments in total
$ 22 spliced alignments have been stored
$ 22497 bytes was the average size of a spliced alignment
$ 26400 bytes predicted gene locations in total
$ 16 predicted gene locations have been stored
$ 1650 bytes was the average size of a predicted gene location
$ 5 megabytes was the average size of the backtrace matrix
$ 44 backtrace matrices have been allocated
$ 
$ date finished: 2009-01-14 00:04:42
-->
