<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-04-02 20:10:44"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C00HBa0203P08-g3tq1/GenomeThreader_SGN_U_tomato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C00HBa0203P08-g3tq1/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C00HBa0203P08-g3tq1/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U319799" ref_strand="+" ref_description="SGN-U319799        Tomato 200607 #1 [13 ESTs aligned] arabidopsis/peptide: | Symbol: None | tetratricopeptide repeat (TPR)-containing protein, contains Pfam profile PF00515: TPR Domain | chr4:17608371-17615770 REVERSE | Aliases: F6G17.110, F6G17_110(evalue: 2e-50, score=196) genbank/nr: Tetratricopeptide-like(evalue: 1e-56, score=223)">
      <seq>aaaagaaaaaaaagaaaaacagttttacagccgcaagatcagaagttcagaagctcacaacacaactgaaaggaaaaaaaaataaaaaatcaatcgcatcaattgagctgcttccgatccacttgagccgccggcgatggcgtcgaaagttactgataggattgaactagctaagctttgtagctctaaggagtggtcgaaagcaattcgaattctcgattctcttcttgctcaaacttgcgtcattcaagatatctgcaaccgagcgttttgctatagtcaattggagcttcacaagcatgttattaaggattgtgataaggcacttcagctcgatcctaagcttcttcaagcttatatattcaaaggacgtgcattatctgctcttggtaagaaagaggaagctcttctagtttgggagcaagggtatgaacatgcagttcatcagtccgcagacttaaagcaactgttagagcttgaagagctgctcaaaattgcaaagcagaacaccgcagttggcagcaacaatcattcggtgcagtcatctggccctgagtccaacactggacctcctctttctaccaaatctggtgaaacttgtgatattagtaaggcctcagatagggaacttaaaacatgcagcagtgggatgttggaaagctctgagaaatcaaagaatagctctgttttacaaaattcctcaagtaataattccaaaaagcataagaagattgagtctgaatcaaaggaattgcatgagagacaagcaaataaaaccaacaacaattgcaaaaaattgggttatccatctctggtttgcagtgagttaagtgatatatctgaagacagtaggaaatcatctgcagtaactagtgaatcaagtgaacagtcagaaccaaatgagttgcaggaaattctcagtcagttgaataataaatgtgatgttcgcgttgaattgagtgatgaaggcaagagaaacaaaaaattttgtgttaccagggtcaacaaaaccaagtccattaacgttgatttccgattatcaaggggaatagcacaggtactgggataccatgctcatgcatagcaggaaaggccttctactgcagtcttcatgtcttttctgttcactttgcttatttcagttgtaatttggtgattacactccacttttaattttgtgaacttaactggaagattctgcatatgttcaaagcttgggtcaactaagctctattattagaattcattttcttcagttaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C00HBa0203P08-g3tq1/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C00HBa0203P08.2" temp_strand="-" temp_description="C00HBa0203P08.2  CU457813.5 htgs_phase:3 submitted_to_sgn_as:C04HBa0203P08 sequenced_by:sanger upload_account_name:uk">
        <position start="9731" stop="6606"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="9431" g_stop="9174" g_length="258"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="258" r_length="258" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="9173" i_stop="9058" i_length="116">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.969" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="9057" g_stop="8948" g_length="110"/>
          <reference_exon_boundary r_type="cDNA" r_start="259" r_stop="368" r_length="110" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="8947" i_stop="8032" i_length="916">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="8031" g_stop="7343" g_length="689"/>
          <reference_exon_boundary r_type="cDNA" r_start="369" r_stop="1057" r_length="689" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="7342" i_stop="7108" i_length="235">
            <donor d_prob="0.832" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="7107" g_stop="6905" g_length="203"/>
          <reference_exon_boundary r_type="cDNA" r_start="1058" r_stop="1260" r_length="203" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C00HBa0203P08.2" gen_strand="-" ref_id="SGN-U319799" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>1260</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C00HBa0203P08.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U319799" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="9431" e_stop="9174"/>
          <exon e_start="9057" e_stop="8948"/>
          <exon e_start="8031" e_stop="7343"/>
          <exon e_start="7107" e_stop="6905"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAGAAAAAAAAGAAAAACAGTTTTACAGCCGCAAGATCAGAAGTTCAGAAGCTCACAACACAACTGAAAGGAAAAAAAAATAAAAAATCAATCGCATCAATTGAGCTGCTTCCGATCCACTTGAGCCGCCGGCGATGGCGTCGAAAGTTACTGATAGGATTGAACTAGCTAAGCTTTGTAGCTCTAAGGAGTGGTCGAAAGCAATTCGAATTCTCGATTCTCTTCTTGCTCAAACTTGCGTCATTCAAGATATCTGGTCCGTTACGTTTTTCACTGTTCCATCTTTTTCCCTGTTTGTATATAGGTTTTTGGACATTTATGAATGAACTGATTAATTTTTCTGAATTTAAAATGTGTTCAATTCTTTTTCAGCAACCGAGCGTTTTGCTATAGTCAATTGGAGCTTCACAAGCATGTTATTAAGGATTGTGATAAGGCACTTCAGCTCGATCCTAAGCTTCTTCAAGCTTATATATTCAAAGGTTCTTTTCATTTTCTCCTTGCATTTCCAGCTAACTGTTTTTACCGTGTATAAGAAATGCGAAAGAGAATTTAGAAGTTTTCAATTGCATTTGGAATGTCAATTTTGAATGTGGATGTGTTGTGGTCAGGCATCCTAATCCCTATAGGCCTGTGAAGTCATCTGGGATACTCTAAATTTACAATTTTAGGGTTCTTGTTCAAATTTAGGTGATTGGCTATAATTGAGTAAATTTTTCTGGTTTTGGACAAACATGAACCATTGGTAATTTCGAGGAGTAGGATGAAGCTCTTGTAAAGCTAGTGAACTGTTGCACCTCTCGGTTGATGTCCTACAATTTACGACTATTGTCAAGTATGCGCCAAAATAAGGGTTAGCTTTAAATGAATTGTGTATGTGAGAAGCCATTTTAAGCTTGATAAAGGTCATATTGGACTTGCTTTCTGTATCCTATAGTGGTCTTATATTATATTTTTGAAATGACTTTTAACTTTAAAATAAACTATGTTTGGTTGGGGTATAAAGGGAAGGGATGGAAAATAAAGGAGGGCATAAGATGGTTGAATTCTATGCTCGCGGGGTACAGTAGAGGGTTTGACCATATTGTGTCTATTGTTAAGTACCTTTTCTCTAAAAGGCTATTTCCACGGCATGAACGTGTGACCTCCTTGTATCATTGCAACAACTCCGATCAGATAAAAAGATCAAATACATTTTTGTCTCTTGTGTGTAACATAGCCCTTGAAATAATGATATAAGAATTTGAATTAACAATATTCTTGTGTGGATACTGTGGATTTTCCCTAGATGTGGTTATAGTTTATGCTGCAGAAATTTCAATATTCTTAAAGCTTTACAAACTGGATTTTTGAGTTTGAAGCATTATGTAACAAAGTTACTTGATACTTGTTGCTTAGGACGTGCATTATCTGCTCTTGGTAAGAAAGAGGAAGCTCTTCTAGTTTGGGAGCAAGGGTATGAACATGCAGTTCATCAGTCCGCAGACTTAAAGCAACTGTTAGAGCTTGAAGAGCTGCTCAAAATTGCAAAGCAGAACACCGCAGTTGGCAGCAACAATCATTCGGTGCAGTCATCTGGCCCTGAGTCCAACACTGGACCTCCTCTTTCTACCAAATCTGGTGAAACTTGTGATATTAGTAAGGCCTCAGATAGGGAACTTAAAACATGCAGCAGTGGGATGTTGGAAAGCTCTGAGAAATCAAAGAATAGCTCTGTTTTACAAAATTCCTCAAGTAATAATTCCAAAAAGCATAAGAAGATTGAGTCTGAATCAAAGGAATTGCATGAGAGACAAGCAAATAAAACCAACAACAATTGCAAAAAATTGGGTTATCCATCTCTGGTTTGCAGTGAGTTAAGTGATATATCTGAAGACAGTAGGAAATCATCTGCAGTAACTAGTGAATCAAGTGAACAGTCAGAACCAAATGAGTTGCAGGAAATTCTCAGTCAGTTGAATAATAAATGTGATGTTCGCGTTGAATTGAGTGATGAAGGCAAGAGAAACAAAAAATTTTGTGTTACCAGGGTCAACAAAACCAAGTCCATTAACGTTGATTTCCGATTATCAAGGGGAATAGCACAGGTACACTGCCTATCCTGTGATATTACAATGAAGACAGGAAGAATTAGTCCATCTATTGATATTTCCTGTTAGTGCGGTTGATCATTAATATGCTATTCTTCTTTATTGAAATACAAATAACAATACATTTGTAACTTCAAATATATGCCAAAGATCAACTTCATGTCTCAATTTGTGAGATTATTTTCTCTCAAATTAAGTAGAGAAATGAATTTTTTCTTGATATATCTGCTAGGTACTGGGATACCATGCTCATGCATAGCAGGAAAGGCCTTCTACTGCAGTCTTCATGTCTTTTCTGTTCACTTTGCTTATTTCAGTTGTAATTTGGTGATTACACTCCACTTTTAATTTTGTGAACTTAACTGGAAGATTCTGCATATGTTCAAAGCTTGGGTCAACTAAGCTCTATTATTAGAATTCATTTTCTTCAGTTAC</genome_strand>
        <mrna_strand>AAAAGAAAAAAAAGAAAAACAGTTTTACAGCCGCAAGATCAGAAGTTCAGAAGCTCACAACACAACTGAAAGGAAAAAAAAATAAAAAATCAATCGCATCAATTGAGCTGCTTCCGATCCACTTGAGCCGCCGGCGATGGCGTCGAAAGTTACTGATAGGATTGAACTAGCTAAGCTTTGTAGCTCTAAGGAGTGGTCGAAAGCAATTCGAATTCTCGATTCTCTTCTTGCTCAAACTTGCGTCATTCAAGATATCTG....................................................................................................................CAACCGAGCGTTTTGCTATAGTCAATTGGAGCTTCACAAGCATGTTATTAAGGATTGTGATAAGGCACTTCAGCTCGATCCTAAGCTTCTTCAAGCTTATATATTCAAAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGTGCATTATCTGCTCTTGGTAAGAAAGAGGAAGCTCTTCTAGTTTGGGAGCAAGGGTATGAACATGCAGTTCATCAGTCCGCAGACTTAAAGCAACTGTTAGAGCTTGAAGAGCTGCTCAAAATTGCAAAGCAGAACACCGCAGTTGGCAGCAACAATCATTCGGTGCAGTCATCTGGCCCTGAGTCCAACACTGGACCTCCTCTTTCTACCAAATCTGGTGAAACTTGTGATATTAGTAAGGCCTCAGATAGGGAACTTAAAACATGCAGCAGTGGGATGTTGGAAAGCTCTGAGAAATCAAAGAATAGCTCTGTTTTACAAAATTCCTCAAGTAATAATTCCAAAAAGCATAAGAAGATTGAGTCTGAATCAAAGGAATTGCATGAGAGACAAGCAAATAAAACCAACAACAATTGCAAAAAATTGGGTTATCCATCTCTGGTTTGCAGTGAGTTAAGTGATATATCTGAAGACAGTAGGAAATCATCTGCAGTAACTAGTGAATCAAGTGAACAGTCAGAACCAAATGAGTTGCAGGAAATTCTCAGTCAGTTGAATAATAAATGTGATGTTCGCGTTGAATTGAGTGATGAAGGCAAGAGAAACAAAAAATTTTGTGTTACCAGGGTCAACAAAACCAAGTCCATTAACGTTGATTTCCGATTATCAAGGGGAATAGCACAG...........................................................................................................................................................................................................................................GTACTGGGATACCATGCTCATGCATAGCAGGAAAGGCCTTCTACTGCAGTCTTCATGTCTTTTCTGTTCACTTTGCTTATTTCAGTTGTAATTTGGTGATTACACTCCACTTTTAATTTTGTGAACTTAACTGGAAGATTCTGCATATGTTCAAAGCTTGGGTCAACTAAGCTCTATTATTAGAATTCATTTTCTTCAGTTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C00HBa0203P08-g3tq1/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U326552" ref_strand="+" ref_description="SGN-U326552        Tomato 200607 #1 [4 ESTs aligned] arabidopsis/peptide: | Symbol: None | hydrolase, alpha/beta fold family protein, low similarity to SP:Q59093 3-oxoadipate enol-lactonase I (EC 3.1.1.24) (Enol-lactone hydrolase I) (Beta-ketoadipate enol-lactone hydrolase I) {Acinetobacter calcoaceticus}; contains Pfam profile PF00561: hydrolase, alpha/beta fold family | chr4:17616653-17618452 REVERSE | Aliases: F6G17.120, F6G17_120(evalue: 1e-114, score=409) genbank/nr: Alpha/beta(evalue: 4e-114, score=414)">
      <seq>ttttttttttttcggtagaagttattaatattttattatagtaaaaaatatgtgtgacttttattttagcataaaacagataaagtaactttactaaagtatttcaataacttgataaccataaaaacccttccattaattagcactcttgcaatactaatgttatgatttgtgaacctaaaattaacagccaccggccaatccatcttccttcgtaccaaaaagtcggctggtcgtctcctccaatttccacaccacaccttaataaagtctaaaaattgggaaacaaaaaactcagaccaaaaaatgggaatcggtgaagaagctcacaacgtaaaagttgtaggttcaggcgaaaagaccatcgtactgggtcatggcttcggcaccgatcagtctgtttggaaacagcttgttccttacctcgttgatgaatatcgtgttgtactttatgataatatgggtgctggaccgacaaatcctgattacttcgattttgatcgatattcttcccttgaaggttatgcgtacgatttaatttccattttggaggaacttcaaatcaatcgttgcatgtacttaggccattccttatcggctatgactggtgttgttgcttctatttttcgtcccgatctcttttccaaactcattcttgtatcagcttccccaaggttcataaatacggatgactattatggaggattcgaatcggaagacatagaacaactatgtcaagcaatggagtcgaactacaaggcatgggtatctggttttgcgccactagcggtgggaggtgacatgaattccgtggcagtacaagaattcagcaggacattattcaacatgagaccagacatagcactcagtgttttccgcactgttttcacgttcgacctaaggcattatctgtcccgtgttactgtcccttgccatatcatacagagctcaatggatgttgcaatgccagtgactgtttctgaatatttacacagaaatttaggcggaaaatcgatcgtagagatcatctcaacagaaggtcatcttccacatttgagcgcacctgaggctactatccccgtattgcttcgacacatttcacatgatattactgctgatgcttcttctagttaaaggataatgaaaaaaacttcttcaaaagtactcatcatcaaaataaatatacatgtgtatttctattaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C00HBa0203P08-g3tq1/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C00HBa0203P08.2" temp_strand="-" temp_description="C00HBa0203P08.2  CU457813.5 htgs_phase:3 submitted_to_sgn_as:C04HBa0203P08 sequenced_by:sanger upload_account_name:uk">
        <position start="22700" stop="20490"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="22399" g_stop="21726" g_length="674"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="674" r_length="674" r_score="0.994"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="21725" i_stop="21317" i_length="409">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.934" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="21316" g_stop="20793" g_length="524"/>
          <reference_exon_boundary r_type="cDNA" r_start="675" r_stop="1198" r_length="524" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="1202" polyA_stop="1211"/>
      <MATCH_line gen_id="C00HBa0203P08.2" gen_strand="-" ref_id="SGN-U326552" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>1198</cumulative_length_of_scored_exons>
        <coverage percentage="0.989" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C00HBa0203P08.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U326552" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="22399" e_stop="21726"/>
          <exon e_start="21316" e_stop="20793"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTAGTGTTTTTCGGTAGAAGTTATTAATATTTTATTATAGTAAAAAATATGTGTGACTTTTATTTTAGCATAAAACAGATAAAGTAACTTTACTAAAGTATTTCAATAACTTGATAACCATAAAAACCCTTCCATTAATTAGCACTCTTGCAATACTAATGTTATGATTTGTGAACCTAAAATTAACAGCCACCGGCCAATCCATCTTCCTTCGTACCAAAAAGTCGGCTGGTCGTCTCCTCCAATTTCCACACCACACCTTAATAAAGTCTAAAAATTGGGAAACAAAAAACTCAGACCAAAAAATGGGAATCGGTGAAGAAGCTCACAACGTAAAAGTTGTAGGTTCAGGCGAAAAGACCATCGTACTGGGTCATGGCTTCGGCACCGATCAGTCTGTTTGGAAACAGCTTGTTCCTTACCTCGTTGATGAATATCGTGTTGTACTTTATGATAATATGGGTGCTGGACCGACAAATCCTGATTACTTCGATTTTGATCGATATTCTTCCCTTGAAGGTTATGCGTACGATTTAATTTCCATTTTGGAGGAACTTCAAATCAATCGTTGCATGTACTTAGGCCATTCCTTATCGGCTATGACTGGTGTTGTTGCTTCTATTTTTCGTCCCGATCTCTTTTCCAAACTCATTCTTGTATCAGCTTCCCCAAGGTGAGATAAATTGATATGTCAATTTATTTGTCTAATGAAACTTTTAAATATTTCTGTATTTAACTAAAAAACAAGAAAAGTGTTAATTAAAATGCTCGTTTAACACAAATAAATTAGAAGGAAGATGTACGTAGCATTTCCCTCTTAAACGTATTTACGATTCAGATATTTTAAATCAATCTCCTCCGTTTCTTTTGATCTTATCTAAAAAGAATCACACAACTTTTCTTTTCTTTTTTTTAAAAAAAATTCAACTTTTTTTGCCAATCACATGAATTTTCTTTTGATATTATGAAGAATTTTGCAATACTTACCATCCACCCAACACCAATAAAATTGGATTGAACGTAACCTCTGTTAACTATCCGAGCAACTCTCTTCTATAACGTCACATGATTTCTTTTCTTAGGTTCATAAATACGGATGACTATTATGGAGGATTCGAATCGGAAGACATAGAACAACTATGTCAAGCAATGGAGTCGAACTACAAGGCATGGGTATCTGGTTTTGCGCCACTAGCGGTGGGAGGTGACATGAATTCCGTGGCAGTACAAGAATTCAGCAGGACATTATTCAACATGAGACCAGACATAGCACTCAGTGTTTTCCGCACTGTTTTCACGTTCGACCTAAGGCATTATCTGTCCCGTGTTACTGTCCCTTGCCATATCATACAGAGCTCAATGGATGTTGCAATGCCAGTGACTGTTTCTGAATATTTACACAGAAATTTAGGCGGAAAATCGATCGTAGAGATCATCTCAACAGAAGGTCATCTTCCACATTTGAGCGCACCTGAGGCTACTATCCCCGTATTGCTTCGACACATTTCACATGATATTACTGCTGATGCTTCTTCTAGTTAAAGGATAATGAAAAAAACTTCTTCAAAAGTACTCATCATCAAAATAAATATACATGTGTATTTCT</genome_strand>
        <mrna_strand>TTTTTTTTTTTTCGGTAGAAGTTATTAATATTTTATTATAGTAAAAAATATGTGTGACTTTTATTTTAGCATAAAACAGATAAAGTAACTTTACTAAAGTATTTCAATAACTTGATAACCATAAAAACCCTTCCATTAATTAGCACTCTTGCAATACTAATGTTATGATTTGTGAACCTAAAATTAACAGCCACCGGCCAATCCATCTTCCTTCGTACCAAAAAGTCGGCTGGTCGTCTCCTCCAATTTCCACACCACACCTTAATAAAGTCTAAAAATTGGGAAACAAAAAACTCAGACCAAAAAATGGGAATCGGTGAAGAAGCTCACAACGTAAAAGTTGTAGGTTCAGGCGAAAAGACCATCGTACTGGGTCATGGCTTCGGCACCGATCAGTCTGTTTGGAAACAGCTTGTTCCTTACCTCGTTGATGAATATCGTGTTGTACTTTATGATAATATGGGTGCTGGACCGACAAATCCTGATTACTTCGATTTTGATCGATATTCTTCCCTTGAAGGTTATGCGTACGATTTAATTTCCATTTTGGAGGAACTTCAAATCAATCGTTGCATGTACTTAGGCCATTCCTTATCGGCTATGACTGGTGTTGTTGCTTCTATTTTTCGTCCCGATCTCTTTTCCAAACTCATTCTTGTATCAGCTTCCCCAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................GTTCATAAATACGGATGACTATTATGGAGGATTCGAATCGGAAGACATAGAACAACTATGTCAAGCAATGGAGTCGAACTACAAGGCATGGGTATCTGGTTTTGCGCCACTAGCGGTGGGAGGTGACATGAATTCCGTGGCAGTACAAGAATTCAGCAGGACATTATTCAACATGAGACCAGACATAGCACTCAGTGTTTTCCGCACTGTTTTCACGTTCGACCTAAGGCATTATCTGTCCCGTGTTACTGTCCCTTGCCATATCATACAGAGCTCAATGGATGTTGCAATGCCAGTGACTGTTTCTGAATATTTACACAGAAATTTAGGCGGAAAATCGATCGTAGAGATCATCTCAACAGAAGGTCATCTTCCACATTTGAGCGCACCTGAGGCTACTATCCCCGTATTGCTTCGACACATTTCACATGATATTACTGCTGATGCTTCTTCTAGTTAAAGGATAATGAAAAAAACTTCTTCAAAAGTACTCATCATCAAAATAAATATACATGTGTATTTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C00HBa0203P08-g3tq1/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U326110" ref_strand="+" ref_description="SGN-U326110        Tomato 200607 #1 [4 ESTs aligned] arabidopsis/peptide: AT4G33920.1 | Symbol: None | protein phosphatase 2C family protein / PP2C family protein, similar to Ser/Thr protein phosphatase 2C (PP2C6) (GI:15020818) (Arabidopsis thaliana); similar to protein phosphatase 2C (GI:3608412) (Mesembryanthemum crystallinum); contains Pfam PF00481 : Protein phosphatase 2C domain | chr4:16260689-16262984 FORWARD | Aliases: F17I5.110, F17I5_110 (evalue: 8e-128, score=453) genbank/nr: gi|77556331|gb|ABA99127.1| Protein phosphatase 2C, putative [Oryza sativa (japonica cultivar-group)] (evalue: 7e-128, score=460)">
      <seq>ttttttttttttttcttcaaaaaaaaaaaaaatcctctttcactctacagccagcagtctaagatgttaagctcctgttttgggagctgctttggtggggacgatggtgatgatcttttatggcatatggacttgaagccacatgccacaggtgaatattctgttgctgtagttcaggccaattctttgcttgaagatcaaggtcaagtttttacaacccctagtgctacttatgtgggtgtttatgatggtcatggtggcccgcaagcttctcgcttcatcaacaacaatctcttccctcaactacaaaagctggctttggaagaaggaggattgtctgaggacgtgatcaggaaagcatttgatgctattgaggagggattcttgcgtttggtgaaacagtcttggctggatcaacctcagattgcatctgcagggtcttgttgtctatttggagcaatctcaaaagatgaattgtatgtggcaaatcttggggactccagggcagtgcttggcaggagagcagagacaggccagacgggtgattcagcagtagtagtggcagaacgtttgtcgatagatcataatgttggggttgaggaggttaggaaggaggtagaggcactgcatccagatgattctcatgttgtggtctacgttcgaggggtttggagaattaagggtataattcaggtttctagatcaattggtgatgtctatctgaagaaacctgagtttaatagagatcctatgttcatacaatatggatatcctattcctttaaaaagagctgtaatgtcagcagagccctccatattgatccgaaagataagaccagaagacttatttttgatatttgcatcggatggcctatgggatcaactaaccgatgacgaagctaaggatattgttttgaagaatcctagaattggaatagcaaaacgattagtgagagctgcccttgagggtgctgcagagaagaaagaaatgagatatgaggacatcaaacgactagagaagggggaaaggcggcacgttcatgatgatatcacagttattgtgatatatttggatcaccctggaaggtcctcaaattctggaattaacattgttaagggcacgaatgtccctcttgacatatactccttgaactcgggtcattaaggagagaacatatcttatgtttccccatgaaaagtgtctaatacatgtatacattatatataccattttgtaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C00HBa0203P08-g3tq1/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C00HBa0203P08.2" temp_strand="-" temp_description="C00HBa0203P08.2  CU457813.5 htgs_phase:3 submitted_to_sgn_as:C04HBa0203P08 sequenced_by:sanger upload_account_name:uk">
        <position start="26954" stop="23237"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26655" g_stop="26345" g_length="311"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="310" r_length="310" r_score="0.984"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="26344" i_stop="25978" i_length="367">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="25977" g_stop="25595" g_length="383"/>
          <reference_exon_boundary r_type="cDNA" r_start="311" r_stop="693" r_length="383" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="25594" i_stop="24292" i_length="1303">
            <donor d_prob="0.957" d_score="1.00"/>
            <acceptor a_prob="0.977" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="24291" g_stop="24055" g_length="237"/>
          <reference_exon_boundary r_type="cDNA" r_start="694" r_stop="930" r_length="237" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="24054" i_stop="23847" i_length="208">
            <donor d_prob="0.804" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="23846" g_stop="23531" g_length="316"/>
          <reference_exon_boundary r_type="cDNA" r_start="931" r_stop="1246" r_length="316" r_score="0.978"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C00HBa0203P08.2" gen_strand="-" ref_id="SGN-U326110" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>1247</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C00HBa0203P08.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U326110" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26655" e_stop="26345"/>
          <exon e_start="25977" e_stop="25595"/>
          <exon e_start="24291" e_stop="24055"/>
          <exon e_start="23846" e_stop="23531"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCTTCTTTCTTTTCTTCAAAAAAAAAAAAAAATCCTCTTTCACTCTACAGCCAGCAGTCTAAGATGTTAAGCTCCTGTTTTGGGAGCTGCTTTGGTGGGGACGATGGTGATGATCTTTTATGGCATATGGACTTGAAGCCACATGCCACAGGTGAATATTCTGTTGCTGTAGTTCAGGCCAATTCTTTGCTTGAAGATCAAGGTCAAGTTTTTACAACCCCTAGTGCTACTTATGTGGGTGTTTATGATGGTCATGGTGGCCCGCAAGCTTCTCGCTTCATCAACAACAATCTCTTCCCTCAACTACAAAGTATGTACTATTTCTTGATACTATTTTACTACTATGAAAGATTGGGTTCACTCTGTTTCTTGTCAGTGGGGTCTAATAGCAAAACTATGCTAGTGCAAATTTTCTAATTTTATATTTCTAAACCTATAATTTTTTTTGACTTCTTGATTGTTGGTTTATGTGGTGTGTTTAGTTAGTATGTTGAAATTATCATGAGATTGATCAGGGGAGGCTGGGAGAAAATTGACTTGGTCATGCGTGGAGTAGAGGAGAAAAAGGAATTGAGCTTGTTCAAATTGTAGACATGTTTAATTTTTGAATGTTTGAAATAGGTGTAATTAGAGATATCATTTTGTGTTTGATTTCCTTGTTTTTTCGATTATTATAGAGCTGGCTTTGGAAGAAGGAGGATTGTCTGAGGACGTGATCAGGAAAGCATTTGATGCTATTGAGGAGGGATTCTTGCGTTTGGTGAAACAGTCTTGGCTGGATCAACCTCAGATTGCATCTGCAGGGTCTTGTTGTCTATTTGGAGCAATCTCAAAAGATGAATTGTATGTGGCAAATCTTGGGGACTCCAGGGCAGTGCTTGGCAGGAGAGCAGAGACAGGCCAGACGGGTGATTCAGCAGTAGTAGTGGCAGAACGTTTGTCGATAGATCATAATGTTGGGGTTGAGGAGGTTAGGAAGGAGGTAGAGGCACTGCATCCAGATGATTCTCATGTTGTGGTCTACGTTCGAGGGGTTTGGAGAATTAAGGGTATAATTCAGGTATCTGTTCTCAATCCTCTTTTCTTCTGTCCTATTAATGCAGTCGACAGTTTTGATTAGACATTTAACCATTCAAGGTTATTAAATTTGTTTACTAGCCTTCATGATATTCAGTAGAATTAATACATCTTTTCAGACCTGCAGCCATGATGAATCAGACCTCCACTTGAAGAAAGCTAATTAGTCCTTTCTGAAATGCGGTTTTGTTATGACTAGGTGGCGTCTGAGAATGTTAATAGTTTCTATTCAATCTAAAGTACATATGGTGGAAGGAGAAAATAGTCAGAGCTCTTTCATTCTCAATTCTGACTTCCGTTAAGTTTACAGTGGTCCATCTGTTGTTACCTCTTAGCTGTCTAGATACGCTAATGTTCTGAAAGTAAGAAAGTTATGGAAGCTAGACAACAAAGAAGACCTAAGTCTTTTTTTTCTGATCTCTGGTTTGTCGTCACACACAAATACAAAGATTCATATTTATGTAGTTAGAAACAATTCGCCTTTCTGTTGCTCGAGCATGTTATGAAGGTGGTCCAAAATCTCCGGGAACTCATAGTTGAGGCTTCTAAATAAGTCACTTTATATATGCTAATTATGTGTGTGCACTCATAGCAAGTTGATCATACCTTTTAGACGTGGTGTATGTCAAGTCTTTCTGGGGTGCCTCTTTTGTGTGTTGGCATAAAGTATGCTTTCATCTACTTTTTCTGAGGTTATAGACCGTATGTTTAAATTTTGTCCTTTTAGCTTCTTAGCCAATCACATTATAATTTATACCCTTGTCAAAAAAAAACATGTCACTTCATATGTTGATTATGTAGATTTGTGTGTCTAGTTCTTTTGGAGAATAAACATCTTTTTATCTTCTACTTTTTAAGATTTTAGACCTTGTGTATAAGCAATTTCTCCTTTTCAATCTAGTAAAAGACACATCAGTGTCAAGATTTACAAGTTTGCACCTATGGGATTCACATCAAGGCAAAAACATTTTGTTGCATGTGAAGTAATTTTGTTTTACGCATGGACACAAAGGAATGTCCTTTCCCGTTTATCCCTTCGCTCTTAACCACTTACTAGCAATCTTTTATCTTTTGGTAACTACAATTTGTAGCAGCGGCTGCATGATACTTATCTTTCCATCTGTATCCTTCATTTTAACTTCAGCAAGGTTCCCTTGTTATATGAAAAATGCCAAATAAAGTCTGAAGCTGACTGTTTTCGTTAAAAGCTTGCAAGCAGCCAATATCAGGGAGCAATCCTATGTTTTGAGAAAATCCATCTCATATTGCCTATTTATCTGTACCAGGTTTCTAGATCAATTGGTGATGTCTATCTGAAGAAACCTGAGTTTAATAGAGATCCTATGTTCATACAATATGGATATCCTATTCCTTTAAAAAGAGCTGTAATGTCAGCAGAGCCCTCCATATTGATCCGAAAGATAAGACCAGAAGACTTATTTTTGATATTTGCATCGGATGGCCTATGGGATCAACTAACCGATGACGAAGCTAAGGATATTGTTTTGAAGAATCCTAGAATTGTGAGTATCGACCCCTCCTATTCTATCACATTCTTTAATTTTTGGAAACAGTACGTACCCTCATCCATTTTGTTATCTGTAAAGTGGATGCAGGCTCTTATGATAACTAGACTCTCCTTGAAGTAATTTTGTGATCAAACTTCTCCTTCATGTTGGGCATAATTAACTAATGAATAAGATAACTGTGTTTTCTTCCTCATTTCTCCAGGGAATAGCAAAACGATTAGTGAGAGCTGCCCTTGAGGGTGCTGCAGAGAAGAAAGAAATGAGATATGAGGACATCAAACGACTAGAGAAGGGGGAAAGGCGGCACGTTCATGATGATATCACAGTTATTGTGATATATTTGGATCACCCTGGAAGGTCCTCAAATTCTGGAATTAACATTGTTAAGGGCACGAATGTCCCTCTTGACATATACTCCTTGAACTCGGGTCATTAAGGAGAGAACATATCTTATGTTTCCCCATGAAAAGTGTCTAATACATGTATACATTATATATACCATTTTGTAAATACGTCGT</genome_strand>
        <mrna_strand>TTTTTTTTTTTTTTCTTC-AAAAAAAAAAAAAATCCTCTTTCACTCTACAGCCAGCAGTCTAAGATGTTAAGCTCCTGTTTTGGGAGCTGCTTTGGTGGGGACGATGGTGATGATCTTTTATGGCATATGGACTTGAAGCCACATGCCACAGGTGAATATTCTGTTGCTGTAGTTCAGGCCAATTCTTTGCTTGAAGATCAAGGTCAAGTTTTTACAACCCCTAGTGCTACTTATGTGGGTGTTTATGATGGTCATGGTGGCCCGCAAGCTTCTCGCTTCATCAACAACAATCTCTTCCCTCAACTACAAA...............................................................................................................................................................................................................................................................................................................................................................................AGCTGGCTTTGGAAGAAGGAGGATTGTCTGAGGACGTGATCAGGAAAGCATTTGATGCTATTGAGGAGGGATTCTTGCGTTTGGTGAAACAGTCTTGGCTGGATCAACCTCAGATTGCATCTGCAGGGTCTTGTTGTCTATTTGGAGCAATCTCAAAAGATGAATTGTATGTGGCAAATCTTGGGGACTCCAGGGCAGTGCTTGGCAGGAGAGCAGAGACAGGCCAGACGGGTGATTCAGCAGTAGTAGTGGCAGAACGTTTGTCGATAGATCATAATGTTGGGGTTGAGGAGGTTAGGAAGGAGGTAGAGGCACTGCATCCAGATGATTCTCATGTTGTGGTCTACGTTCGAGGGGTTTGGAGAATTAAGGGTATAATTCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTCTAGATCAATTGGTGATGTCTATCTGAAGAAACCTGAGTTTAATAGAGATCCTATGTTCATACAATATGGATATCCTATTCCTTTAAAAAGAGCTGTAATGTCAGCAGAGCCCTCCATATTGATCCGAAAGATAAGACCAGAAGACTTATTTTTGATATTTGCATCGGATGGCCTATGGGATCAACTAACCGATGACGAAGCTAAGGATATTGTTTTGAAGAATCCTAGAATT................................................................................................................................................................................................................GGAATAGCAAAACGATTAGTGAGAGCTGCCCTTGAGGGTGCTGCAGAGAAGAAAGAAATGAGATATGAGGACATCAAACGACTAGAGAAGGGGGAAAGGCGGCACGTTCATGATGATATCACAGTTATTGTGATATATTTGGATCACCCTGGAAGGTCCTCAAATTCTGGAATTAACATTGTTAAGGGCACGAATGTCCCTCTTGACATATACTCCTTGAACTCGGGTCATTAAGGAGAGAACATATCTTATGTTTCCCCATGAAAAGTGTCTAATACATGTATACATTATATATACCATTTTGTAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C00HBa0203P08-g3tq1/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U313917" ref_strand="+" ref_description="SGN-U313917        Tomato 200607 #1 [4 ESTs aligned] arabidopsis/peptide: | Symbol: None | succinate dehydrogenase, iron-sulphur subunit, mitochondrial (SDH2-1), nearly identical to mitochondrial succinate dehydrogenase iron-sulphur subunit (sdh2-1) (gi:12049598) from Arabidopsis thaliana | chr3:10132197-10133997 REVERSE | Aliases: K1G2.19(evalue: 1e-94, score=337) genbank/nr: gi|15232149|ref|NP_189374.1| succinate dehydrogenase, iron-sulphur subunit, mitochondrial (sdh2-1) [Arabidopsis thaliana] gi|7939510|dbj|BAA95713.1| succinate dehydrogenase iron-protein subunit [Arabidopsis thaliana] gi|14334680|gb|AAK59518.1| putative succinate dehydrogenase iron-protein subunit [Arabidopsis thaliana] gi|17104677|gb|AAL34227.1| putative succinate dehydrogenase iron-protein subunit [Arabidopsis thaliana](evalue: 8e-93, score=337)">
      <seq>tttaatccgacgagctatttatagggttcagtcatcttcgccggcggcgaggctacttgttgcccgagctcacgcttcggacaccaaatcccagcaggtccaacctcaagtcgtttcaaatttaccgatggaatccagataacccagggaaacccgagctccaagaatacaaaattgatctgaaggaatgtggccctatggtcttagacgccctaatcaaaatcaagaatgaagttgacccttcaccaaccttcagaagatcttgcagagaagggatctgtgggtcctgtgccatgaacatcgacggctgtaatggactcgcttgtttgacaaagatctcatcggattctgtatcgacgattacgccactgccacatatgtttgtgattaaggatttggtagtggatatgactaatttttataatcagtataagtctattgagccttggctgaagagaaaaacacctgcgccaacgcctggaaaggagatacctcagagcaagagcgataaggctaagttggatgggatgtacgagtgtattctctgtgcttgttgtagtacatcatgccctagctactggtggaatcctgagtcttatcttggtcctgctgcactactcctgccaatagatggatcatggatagccgtggtgaacctactctggaacgcct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C00HBa0203P08-g3tq1/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C00HBa0203P08.2" temp_strand="+" temp_description="C00HBa0203P08.2  CU457813.5 htgs_phase:3 submitted_to_sgn_as:C04HBa0203P08 sequenced_by:sanger upload_account_name:uk">
        <position start="27243" stop="29888"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="27543" g_stop="28173" g_length="631"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="630" r_length="630" r_score="0.998"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="28174" i_stop="29546" i_length="1373">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="0.998" a_score="0.93"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29547" g_stop="29588" g_length="42"/>
          <reference_exon_boundary r_type="cDNA" r_start="631" r_stop="672" r_length="42" r_score="0.929"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C00HBa0203P08.2" gen_strand="+" ref_id="SGN-U313917" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>673</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C00HBa0203P08.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U313917" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="27543" e_stop="28173"/>
          <exon e_start="29547" e_stop="29588"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTAATCCGACGAGCTATTTATAGGGTTCAGTCATCTTCGCCGGCGGCGAGGCTACTTGTTGCCCGAGCTCACGCTTCGGACACCAAATCCCAGCAGGTCCAACCTCAAGTCGTTTCAAATTTACCGATGGAATCCAGATAACCCAGGGAAACCCGAGCTCCAAGAATACAAAATTGATCTGAAGGAATGTGGCCCTATGGTCTTAGACGCCCTAATCAAAATCAAGAATGAAGTTGACCCTTCACCAACCTTCAGAAGATCTTGCAGAGAAGGGATCTGTGGGTCCTGTGCCATGAACATCGACGGCTGTAATGGACTCGCTTGTTTGACAAAGATCTCATCGGATTCTGTATCGACGATTACGCCACTGCCACATATGTTTGTGATTAAGGATTTGGTAGTGGATATGACTAATTTTTATAATCAGTATAAGTCTATTGAGCCTTGGCTGAAGAGAAAAACACCTGCGCCAACGCCTGGAAAGGAGATACCTCAGAGCAAGAGCGATAAGGCTAAGTTGGATGGGATGTACGAGTGTATTCTCTGTGCTTGTTGTAGTACATCATGCCCTAGCTACTGGTGGAATCCTGAGTCTTATCTTGGTCCTGCTGCACTACTCCATGCCAATAGGTAATATTTACTTGATTTTTTTTTCATGTTAAGCTCTTCCTGTTTTGACTTCACTCTCTTTTAATGTTCTGTATCTTTTAAATTGTTATATTCTGGTTGCATTTGGATCAAATAATAAGTTAAAGATACCTATAATTTGTCGGCAGAGTTACCGTTATATTCCTTATTGGTGTTAGCCTGGTAGGTAGCATGTATCTCATGAAATTAGTCGAGTAACCATGGTCAGTAAGATTTTAGTAAGTACAACAACATGTATGGTACTTGTGCTTAAATGTAACAGGATGCCCATAAATTTTGTGTGAATAAATTGTATCAGATTAAGAAAGTTGTGTTCCTTTTAGATACAAAGTGAATCTCATTTATATGAGGTGCAACTTCTTGTAGAAGTTTGATGAATCGTATGCGGTAGGATCTTATTGTTTGGTAAAATGCAACTTCTATGGAAGTCTTGGATATTATTCTGAGTTATCACTAGACAACTTTGAAACATATTACTTTTCTCAACCTGCTAATCCCTTGTTGGTTCATTTCTTTGTTGCTAGTTTCTAACCTATGGCATCTCTGTTATTTGACTCAAAATTTAAGAATATCCAAGCAACATCTCTTTTTACCTATACAATCTTTCAGATTTTTGACTATCATGTGATTAGTTTTTTTGTCTGTGCTCTCCAAGCCTAACTAATCTGCAGAGGAAACTAGGTATTTCCTCCTTTGCATAAACATCATGCCCTGCTCTCTCATTCCCTCTGCTGTCTACGCCATCACAACTATTTCTTGGAGCACCCCGCACCTATTGTTCTGATCGTTCCTCTCTAGAACAATCAGCTTTTCTCAATTCTTAGATTAGCTGCAGGGTTGACCTACATTATGTTTGGTGTGTGCTCAAGCACCCATTGTCTGTTATTCTTTCTCAATGCGGAAATTTCAAGTGTGGATGGAAAATGTTCATATTACATTCTGCGCTTGTCATCATTTAAAAATAATGACACCAAATGCAGATGAAGGGACCTTTTCTGTTCAGTTCTACAAACTTGGAAATTTATTATGCCAAAGGGAATATTAGAGAGATGCTGATATCTGTGGGGGCAAACTCAACTACTCAACGGATGGTTTAGGTTTCTTTCCAAACTGCCTTTAGAGTTGTATGATTTATGTGCTCAGAGATGTAGAACGTTATTTCCCTCGGTCATTTGCATGATGAGGGGATAAGAGTTTTAAATTTCTGAAATTTCTGTACTTGCCTTGATGTTATTAAGAGGTTTGGATTGTATATAAGTTGCTCTACCCCCTTAACCCTTCTATCCATTGCTATTTCAGATGTTGTTCATTATTATATGTACTGAAAGGGGTTATATCTCAACTTTTAAATGTAGATGGATCATGGATAGCCGTGATGAACATACTCTGGAGCGCCT</genome_strand>
        <mrna_strand>TTTAATCCGACGAGCTATTTATAGGGTTCAGTCATCTTCGCCGGCGGCGAGGCTACTTGTTGCCCGAGCTCACGCTTCGGACACCAAATCCCAGCAGGTCCAACCTCAAGTCGTTTCAAATTTACCGATGGAATCCAGATAACCCAGGGAAACCCGAGCTCCAAGAATACAAAATTGATCTGAAGGAATGTGGCCCTATGGTCTTAGACGCCCTAATCAAAATCAAGAATGAAGTTGACCCTTCACCAACCTTCAGAAGATCTTGCAGAGAAGGGATCTGTGGGTCCTGTGCCATGAACATCGACGGCTGTAATGGACTCGCTTGTTTGACAAAGATCTCATCGGATTCTGTATCGACGATTACGCCACTGCCACATATGTTTGTGATTAAGGATTTGGTAGTGGATATGACTAATTTTTATAATCAGTATAAGTCTATTGAGCCTTGGCTGAAGAGAAAAACACCTGCGCCAACGCCTGGAAAGGAGATACCTCAGAGCAAGAGCGATAAGGCTAAGTTGGATGGGATGTACGAGTGTATTCTCTGTGCTTGTTGTAGTACATCATGCCCTAGCTACTGGTGGAATCCTGAGTCTTATCTTGGTCCTGCTGCACTACTCC-TGCCAATAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGATCATGGATAGCCGTGGTGAACCTACTCTGGAACGCCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C00HBa0203P08-g3tq1/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U334672" ref_strand="-" ref_description="SGN-U334672        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: | Symbol: None | succinate dehydrogenase, iron-sulphur subunit, mitochondrial (SDH2-1), nearly identical to mitochondrial succinate dehydrogenase iron-sulphur subunit (sdh2-1) (gi:12049598) from Arabidopsis thaliana | chr3:10132197-10133997 REVERSE | Aliases: K1G2.19(evalue: 9e-45, score=177) genbank/nr: gi|15232149|ref|NP_189374.1| succinate dehydrogenase, iron-sulphur subunit, mitochondrial (sdh2-1) [Arabidopsis thaliana] gi|7939510|dbj|BAA95713.1| succinate dehydrogenase iron-protein subunit [Arabidopsis thaliana] gi|14334680|gb|AAK59518.1| putative succinate dehydrogenase iron-protein subunit [Arabidopsis thaliana] gi|17104677|gb|AAL34227.1| putative succinate dehydrogenase iron-protein subunit [Arabidopsis thaliana](evalue: 7e-43, score=177)">
      <seq>gccctagctactggtggaatcctgagtcttatcttggtcctgctgcactactccatgccaatagatggatcatggatagccgtgatgaacatactctggagcgcctggacgcagttaatgatgaattcaagctttatcgctgccacactattttgaactgttctcgtgcttgcccaaagggatttaatcctggcaagctcagaacatcaagcgcctggagatggcgccttgagcctgcactctgcagtgtagtgtaccagtctattctgctaacattgattttggaggaccagtaggaggtagttctcaaaataatttatgcacagatcgtaatttgctttctgagatttttttttggtgctagggtgttgcccttccccgagccctgtgtgaatatgggattcttttgtgcaccgtgctgccttattcgagatgaaaggtgcatctcacctgaaatattgtactaacaattagtatgatagctgaagtgaagcaaacatgtaatagcagagagtatatacaaatttatgaactgatttatcatagaaaataatgatttctataaatattcgtttgaaaatatacctcataaaaacttcatcaattatataaaacaaaatttatattaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C00HBa0203P08-g3tq1/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C00HBa0203P08.2" temp_strand="+" temp_description="C00HBa0203P08.2  CU457813.5 htgs_phase:3 submitted_to_sgn_as:C04HBa0203P08 sequenced_by:sanger upload_account_name:uk">
        <position start="27810" stop="30398"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28110" g_stop="28173" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="64" r_length="64" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="28174" i_stop="29546" i_length="1373">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29547" g_stop="30120" g_length="574"/>
          <reference_exon_boundary r_type="cDNA" r_start="65" r_stop="638" r_length="574" r_score="0.977"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C00HBa0203P08.2" gen_strand="+" ref_id="SGN-U334672" ref_strand="-">
        <total_alignment_score>0.980</total_alignment_score>
        <cumulative_length_of_scored_exons>638</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C00HBa0203P08.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U334672" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="28110" e_stop="28173"/>
          <exon e_start="29547" e_stop="30120"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCCCTAGCTACTGGTGGAATCCTGAGTCTTATCTTGGTCCTGCTGCACTACTCCATGCCAATAGGTAATATTTACTTGATTTTTTTTTCATGTTAAGCTCTTCCTGTTTTGACTTCACTCTCTTTTAATGTTCTGTATCTTTTAAATTGTTATATTCTGGTTGCATTTGGATCAAATAATAAGTTAAAGATACCTATAATTTGTCGGCAGAGTTACCGTTATATTCCTTATTGGTGTTAGCCTGGTAGGTAGCATGTATCTCATGAAATTAGTCGAGTAACCATGGTCAGTAAGATTTTAGTAAGTACAACAACATGTATGGTACTTGTGCTTAAATGTAACAGGATGCCCATAAATTTTGTGTGAATAAATTGTATCAGATTAAGAAAGTTGTGTTCCTTTTAGATACAAAGTGAATCTCATTTATATGAGGTGCAACTTCTTGTAGAAGTTTGATGAATCGTATGCGGTAGGATCTTATTGTTTGGTAAAATGCAACTTCTATGGAAGTCTTGGATATTATTCTGAGTTATCACTAGACAACTTTGAAACATATTACTTTTCTCAACCTGCTAATCCCTTGTTGGTTCATTTCTTTGTTGCTAGTTTCTAACCTATGGCATCTCTGTTATTTGACTCAAAATTTAAGAATATCCAAGCAACATCTCTTTTTACCTATACAATCTTTCAGATTTTTGACTATCATGTGATTAGTTTTTTTGTCTGTGCTCTCCAAGCCTAACTAATCTGCAGAGGAAACTAGGTATTTCCTCCTTTGCATAAACATCATGCCCTGCTCTCTCATTCCCTCTGCTGTCTACGCCATCACAACTATTTCTTGGAGCACCCCGCACCTATTGTTCTGATCGTTCCTCTCTAGAACAATCAGCTTTTCTCAATTCTTAGATTAGCTGCAGGGTTGACCTACATTATGTTTGGTGTGTGCTCAAGCACCCATTGTCTGTTATTCTTTCTCAATGCGGAAATTTCAAGTGTGGATGGAAAATGTTCATATTACATTCTGCGCTTGTCATCATTTAAAAATAATGACACCAAATGCAGATGAAGGGACCTTTTCTGTTCAGTTCTACAAACTTGGAAATTTATTATGCCAAAGGGAATATTAGAGAGATGCTGATATCTGTGGGGGCAAACTCAACTACTCAACGGATGGTTTAGGTTTCTTTCCAAACTGCCTTTAGAGTTGTATGATTTATGTGCTCAGAGATGTAGAACGTTATTTCCCTCGGTCATTTGCATGATGAGGGGATAAGAGTTTTAAATTTCTGAAATTTCTGTACTTGCCTTGATGTTATTAAGAGGTTTGGATTGTATATAAGTTGCTCTACCCCCTTAACCCTTCTATCCATTGCTATTTCAGATGTTGTTCATTATTATATGTACTGAAAGGGGTTATATCTCAACTTTTAAATGTAGATGGATCATGGATAGCCGTGATGAACATACTCTGGAGCGCCTGGACGCAGTTAATGATGAATTCAAGCTTTATCGCTGCCACACTATTTTGAACTGTTCTCGTGCTTGCCCAAAGGGATTTAATCCTGGCAAGCTCAGAACATCAAGCGCCTGGAGATGGCGCCTTGAGCCTGCACTCTGCAGTGTAGTGTACCAGTCTATTCTGCTAACATTGATTTTGGAGGACCAGTAGGAGGTAGTTCTCAAAATAATTTATGCACAGATCGTAATTTGCTTTCTGAGATTTTTTTTTGGTGCTAGGGTGTTGCCCTTCCCCGAGCCCTGTGTGAATATGGGATTCTTTTGTGCACCGTGCTGCCTTATTCGAGATGAAAGGTGCATCTCACCTGAAATATTGTACTAACAATTAGTATGATAGCTGAAGTGAAGCAAACATGTAATAGCAGAGAGTATATACAAATTTATGAACTGATTTATCATAGAAAATAATGATTTCTATAAATATTCGTTTGAAATTATACCTCATAAAAACTTCATCAATTATATAAAACATTTCTTATATTATCGATGGTAG</genome_strand>
        <mrna_strand>GCCCTAGCTACTGGTGGAATCCTGAGTCTTATCTTGGTCCTGCTGCACTACTCCATGCCAATAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGATCATGGATAGCCGTGATGAACATACTCTGGAGCGCCTGGACGCAGTTAATGATGAATTCAAGCTTTATCGCTGCCACACTATTTTGAACTGTTCTCGTGCTTGCCCAAAGGGATTTAATCCTGGCAAGCTCAGAACATCAAGCGCCTGGAGATGGCGCCTTGAGCCTGCACTCTGCAGTGTAGTGTACCAGTCTATTCTGCTAACATTGATTTTGGAGGACCAGTAGGAGGTAGTTCTCAAAATAATTTATGCACAGATCGTAATTTGCTTTCTGAGATTTTTTTTTGGTGCTAGGGTGTTGCCCTTCCCCGAGCCCTGTGTGAATATGGGATTCTTTTGTGCACCGTGCTGCCTTATTCGAGATGAAAGGTGCATCTCACCTGAAATATTGTACTAACAATTAGTATGATAGCTGAAGTGAAGCAAACATGTAATAGCAGAGAGTATATACAAATTTATGAACTGATTTATCATAGAAAATAATGATTTCTATAAATATTCGTTTGAAAATATACCTCATAAAAACTTCATCAATTATATAAAACAAAATTTATATTAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C00HBa0203P08-g3tq1/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U330312" ref_strand="+" ref_description="SGN-U330312        Tomato 200607 #1 [2 ESTs aligned] arabidopsis/peptide: | Symbol: None | expressed protein | chr5:26885516-26886712 REVERSE | Aliases: K8K14.7, K8K14_7(evalue: 1e-14, score=76.3) genbank/nr: hypothetical(evalue: 3e-14, score=81.3)">
      <seq>ctaaaattcgaaatcaatttcattctcatcctagtccaacacctcaggttcgattttctaaagttagttttcaatcaaatgtcaacaattccacacgaaaatcagcattgtggagtctatttcgcgttggcctagttacaccaccagaaattgcattacaagatctgaaaaacagaggaaacagggatatttcaggaagtcgaaatagcacgagcagtagtagcagcgggagcttcggcaataatgataataagatgagaattaagaaaacgaaacagaggttttctctaggcagctgtaaatgttcagcaaatgtggtagaaacagttccaatcgtgaacagtagaagtacaattaagaaaataagaaaagccacaggggaccatgaacatgaagataagaaggattcatcagagaatatcaaatcgacaaaaaagcaagcaatgtcacgtcatcgaacgtttgagtggttaaagcaactttcactagaaggtccatcagatgaaacataaagatttcaaagtatcacgcatgcttagcttcttttttttcttctttttttcatgtaatgtaatgtaactttttttttttttgagtagtggaatcatgaagttgattaattgaagtaattgaggacgcaattataaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C00HBa0203P08-g3tq1/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C00HBa0203P08.2" temp_strand="-" temp_description="C00HBa0203P08.2  CU457813.5 htgs_phase:3 submitted_to_sgn_as:C04HBa0203P08 sequenced_by:sanger upload_account_name:uk">
        <position start="32063" stop="30816"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="31763" g_stop="31109" g_length="655"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="654" r_length="654" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C00HBa0203P08.2" gen_strand="-" ref_id="SGN-U330312" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>655</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C00HBa0203P08.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U330312" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="31763" e_stop="31109"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTAAAATTCGAAATCAATTTCATTCTCATCCTAGTCCAACACCTCAGGTTCGATTTTCTAAAGTTAGTTTTCAATCAAATGTCAACAATTCCACACGAAAATCAGCATTGTGGAGTCTATTTCGCGTTGGCCTAGTTACACCACCAGAAATTGCATTACAAGATCTGAAAAACAGAGGAAACAGGGATATTTCAGGAAGTCGAAATAGCACGAGCAGTAGTAGCAGCGGGAGCTTCGGCAATAATGATAATAAGATGAGAATTAAGAAAACGAAACAGAGGTTTTCTCTAGGCAGCTGTAAATGTTCAGCAAATGTGGTAGAAACAGTTCCAATCGTGAACAGTAGAAGTACAATTAAGAAAATAAGAAAAGCCACAGGGGACCATGAACATGAAGATAAGAAGGATTCATCAGAGAATATCAAATCGACAAAAAAGCAAGCAATGTCACGTCATCGAACGTTTGAGTGGTTAAAGCAACTTTCACTAGAAGGTCCATCAGATGAAACATAAAGATTTCAAAGTATCACGCATGCTTAGCTTCTTTTTTTTCTTCTTTTTTTCATGTAATGTAATGTAACTTTTTTTTTTTTTTGAGTAGTGGAATCATGAAGTTGATTAATTGAAGTAATTGAGGACGCAATTATAATGGTAGC</genome_strand>
        <mrna_strand>CTAAAATTCGAAATCAATTTCATTCTCATCCTAGTCCAACACCTCAGGTTCGATTTTCTAAAGTTAGTTTTCAATCAAATGTCAACAATTCCACACGAAAATCAGCATTGTGGAGTCTATTTCGCGTTGGCCTAGTTACACCACCAGAAATTGCATTACAAGATCTGAAAAACAGAGGAAACAGGGATATTTCAGGAAGTCGAAATAGCACGAGCAGTAGTAGCAGCGGGAGCTTCGGCAATAATGATAATAAGATGAGAATTAAGAAAACGAAACAGAGGTTTTCTCTAGGCAGCTGTAAATGTTCAGCAAATGTGGTAGAAACAGTTCCAATCGTGAACAGTAGAAGTACAATTAAGAAAATAAGAAAAGCCACAGGGGACCATGAACATGAAGATAAGAAGGATTCATCAGAGAATATCAAATCGACAAAAAAGCAAGCAATGTCACGTCATCGAACGTTTGAGTGGTTAAAGCAACTTTCACTAGAAGGTCCATCAGATGAAACATAAAGATTTCAAAGTATCACGCATGCTTAGCTTCTTTTTTTTCTTCTTTTTTTCATGTAATGTAATGTAAC-TTTTTTTTTTTTTGAGTAGTGGAATCATGAAGTTGATTAATTGAAGTAATTGAGGACGCAATTATAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C00HBa0203P08-g3tq1/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U325304" ref_strand="+" ref_description="SGN-U325304        Tomato 200607 #1 [5 ESTs aligned] arabidopsis/peptide: | Symbol: None | expressed protein | chr5:26885516-26886712 REVERSE | Aliases: K8K14.7, K8K14_7(evalue: 1e-07, score=53.5) genbank/nr: hypothetical(evalue: 6e-09, score=64.3)">
      <seq>tttataatataatctatataaattaataccattcaaatgcatgcattgttaaattaaagtagtccccaccatcttcactcttcccaagtagtaacagagaagcccaactttatttttctccgtaataatcatttgaaaggcttaaaaaagctccacgctgctaaaaaaaaagccggctttatttgcgccccaatagtattcttgacttacaaacaaggaacgaacaattttctattgtcgcctgcaagcttattcctacatcccatttgtctccctctttatataactgttcctcttttttaactatattattctatatcgacctcgatcaacaagaacaagagcaagaaaaaatgatgaaaattactagggaaagcgaagaaattgttctcctcgaagaacaatacgatgaattagaagacgaatatgatgaagaagcattatcactgtgtgatcttccgaacaatgaagaggacgaaaagaaggaagaagtttctagaagtactagcgtagaaggcggacaattagaagattttgattttagctcttctggtggtaatttgttgaaagaatcagagatgtgtacggcagatgaaattttctacaaaggccaaatattaccgttgcgtcattcaattagtttgccaagtgatcggcgcaattgtcatgatacaaattcaagcagtagaagtagcagtattcgaagccaacgttcatctagcagtggcagttcatctaatttcaacacgaaatatcagcctaaaattcgaaatcaatttcattctcatcctagtccaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C00HBa0203P08-g3tq1/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C00HBa0203P08.2" temp_strand="-" temp_description="C00HBa0203P08.2  CU457813.5 htgs_phase:3 submitted_to_sgn_as:C04HBa0203P08 sequenced_by:sanger upload_account_name:uk">
        <position start="32822" stop="31425"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="32522" g_stop="31725" g_length="798"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="798" r_length="798" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C00HBa0203P08.2" gen_strand="-" ref_id="SGN-U325304" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>798</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C00HBa0203P08.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U325304" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="32522" e_stop="31725"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTATAATATAATCTATATAAATTAATACCATTCAAATGCATGCATTGTTAAATTAAAGTAGTCCCCACCATCTTCACTCTTCCCAAGTAGTAACAGAGAAGCCCAACTTTATTTTTCTCCGTAATAATCATTTGAAAGGCTTAAAAAAGCTCCACGCTGCTAAAAAAAAAGCCGGCTTTATTTGCGCCCCAATAGTATTCTTGACTTACAAACAAGGAACGAACAATTTTCTATTGTCGCCTGCAAGCTTATTCCTACATCCCATTTGTCTCCCTCTTTATATAACTGTTCCTCTTTTTTAACTATATTATTCTATATCGACCTCGATCAACAAGAACAAGAGCAAGAAAAAATGATGAAAATTACTAGGGAAAGCGAAGAAATTGTTCTCCTCGAAGAACAATACGATGAATTAGAAGACGAATATGATGAAGAAGCATTATCACTGTGTGATCTTCCGAACAATGAAGAGGACGAAAAGAAGGAAGAAGTTTCTAGAAGTACTAGCGTAGAAGGCGGACAATTAGAAGATTTTGATTTTAGCTCTTCTGGTGGTAATTTGTTGAAAGAATCAGAGATGTGTACGGCAGATGAAATTTTCTACAAAGGCCAAATATTACCGTTGCGTCATTCAATTAGTTTGCCAAGTGATCGGCGCAATTGTCATGATACAAATTCAAGCAGTAGAAGTAGCAGTATTCGAAGCCAACGTTCATCTAGCAGTGGCAGTTCATCTAATTTCAACACGAAATATCAGCCTAAAATTCGAAATCAATTTCATTCTCATCCTAGTCCAA</genome_strand>
        <mrna_strand>TTTATAATATAATCTATATAAATTAATACCATTCAAATGCATGCATTGTTAAATTAAAGTAGTCCCCACCATCTTCACTCTTCCCAAGTAGTAACAGAGAAGCCCAACTTTATTTTTCTCCGTAATAATCATTTGAAAGGCTTAAAAAAGCTCCACGCTGCTAAAAAAAAAGCCGGCTTTATTTGCGCCCCAATAGTATTCTTGACTTACAAACAAGGAACGAACAATTTTCTATTGTCGCCTGCAAGCTTATTCCTACATCCCATTTGTCTCCCTCTTTATATAACTGTTCCTCTTTTTTAACTATATTATTCTATATCGACCTCGATCAACAAGAACAAGAGCAAGAAAAAATGATGAAAATTACTAGGGAAAGCGAAGAAATTGTTCTCCTCGAAGAACAATACGATGAATTAGAAGACGAATATGATGAAGAAGCATTATCACTGTGTGATCTTCCGAACAATGAAGAGGACGAAAAGAAGGAAGAAGTTTCTAGAAGTACTAGCGTAGAAGGCGGACAATTAGAAGATTTTGATTTTAGCTCTTCTGGTGGTAATTTGTTGAAAGAATCAGAGATGTGTACGGCAGATGAAATTTTCTACAAAGGCCAAATATTACCGTTGCGTCATTCAATTAGTTTGCCAAGTGATCGGCGCAATTGTCATGATACAAATTCAAGCAGTAGAAGTAGCAGTATTCGAAGCCAACGTTCATCTAGCAGTGGCAGTTCATCTAATTTCAACACGAAATATCAGCCTAAAATTCGAAATCAATTTCATTCTCATCCTAGTCCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C00HBa0203P08-g3tq1/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U314575" ref_strand="-" ref_description="SGN-U314575        Tomato 200607 #1 [4 ESTs aligned] arabidopsis/peptide: | Symbol: None | expressed protein | chr2:9847606-9848126 FORWARD | Aliases: F21P24.17, F21P24_17(evalue: 2e-15, score=78.6) genbank/nr: seed(evalue: 6e-21, score=102)">
      <seq>gaggattaatataacagagaggagaaagaaaagaaatggaaaagcaaagagatagtaataagggatgtatagatgagagaaaactagaaggattgccagtggatacaagtccatatacacagtataaggatttggaggattacaagcaacagggttatggaacacaaggccatcaacagcccaatcctgggcgtggtgctgccagttccaccgacgccccaaccctcgcaggtggtggatctgctgaagctcagctttctgctactgacaacatcaatcgccagggtgttccttaattaatttcgttaatttttagtcgcatttacaacagttattccttttttttacttgggtaaaatacgtatatgtagaataataacaataagaacgttctgaattagtgattctagatcttagattcgtccctgtttggtgttgtttgtatgttccttccgtcggcttgtaacttaataaatatatttttctaaaaaaaaaaaataaaaaaaaccaaaaaaaggaaaataaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C00HBa0203P08-g3tq1/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C00HBa0203P08.2" temp_strand="-" temp_description="C00HBa0203P08.2  CU457813.5 htgs_phase:3 submitted_to_sgn_as:C04HBa0203P08 sequenced_by:sanger upload_account_name:uk">
        <position start="36319" stop="35224"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36023" g_stop="35530" g_length="494"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="494" r_length="494" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="495" polyA_stop="507"/>
      <MATCH_line gen_id="C00HBa0203P08.2" gen_strand="-" ref_id="SGN-U314575" ref_strand="-">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>494</cumulative_length_of_scored_exons>
        <coverage percentage="0.918" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C00HBa0203P08.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U314575" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="36023" e_stop="35530"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAATATTAATATAACAGAGAGGAGAAAGAAAAGAAATGGAAAAGCAAAGAGATAGTAATAAGGGATGTATAGATGAGAGAAAACTAGAAGGATTGCCAGTGGATACAAGTCCATATACACAGTATAAGGATTTGGAGGATTACAAGCAACAGGGTTATGGAACACAAGGCCATCAACAGCCCAATCCTGGGCGTGGTGCTGCCAGTTCCACCGACGCCCCAACCCTCGCAGGTGGTGGATCTGCTGAAGCTCAGCTTTCTGCTACTGACAACATCAATCGCCAGGGTGTTCCTTAATTAATTTCGTTAATTTTTAGTCGCATTTACAACAGTTATTCCTTTTTTTTACTTGGGTAAAATACGTATATGTAGAATAATAACAATAAGAACGTTCTGAATTAGTGATTCTAGATCTTAGATTCGTCCCTGTTTGGTGTTGTTTGTATGTTCCTTCCGTCGGCTTGTAACTTAATAAATATATTTTTCTAAAAATAA</genome_strand>
        <mrna_strand>GAGGATTAATATAACAGAGAGGAGAAAGAAAAGAAATGGAAAAGCAAAGAGATAGTAATAAGGGATGTATAGATGAGAGAAAACTAGAAGGATTGCCAGTGGATACAAGTCCATATACACAGTATAAGGATTTGGAGGATTACAAGCAACAGGGTTATGGAACACAAGGCCATCAACAGCCCAATCCTGGGCGTGGTGCTGCCAGTTCCACCGACGCCCCAACCCTCGCAGGTGGTGGATCTGCTGAAGCTCAGCTTTCTGCTACTGACAACATCAATCGCCAGGGTGTTCCTTAATTAATTTCGTTAATTTTTAGTCGCATTTACAACAGTTATTCCTTTTTTTTACTTGGGTAAAATACGTATATGTAGAATAATAACAATAAGAACGTTCTGAATTAGTGATTCTAGATCTTAGATTCGTCCCTGTTTGGTGTTGTTTGTATGTTCCTTCCGTCGGCTTGTAACTTAATAAATATATTTTTCTAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C00HBa0203P08-g3tq1/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U324765" ref_strand="+" ref_description="SGN-U324765        Tomato 200607 #1 [5 ESTs aligned] arabidopsis/peptide: | Symbol: None | oxidoreductase, 2OG-Fe(II) oxygenase family protein, similar to prolyl 4-hydroxylase, alpha subunit, from Gallus gallus (GI:212530), Rattus norvegicus (GI:474940), Drosophila melanogaster (GI:4336512); contains PF03171 2OG-Fe(II) oxygenase superfamily domain | chr4:16256738-16258776 REVERSE | Aliases: F17I5.100, F17I5_100(evalue: 2e-102, score=232) genbank/nr: gi|40809925|dbj|BAD07294.1| prolyl 4-hydroxylase [Nicotiana tabacum] (evalue: 5e-116, score=278)">
      <seq>cgggaagaagatgaagagcaaaggtagattagtgggacaaagatggcggagcatagggggcttaccttcaatatttctgctatgtcttttcttgttcttcgccggtttattcggttctactctcgtttctcatcaggatgtacaactacttactgtacggcctaggtcaagggtgcttaaatctgtggaagaatttgatgttttgcctaatggcgacactggagaacactcccttacttccatccccttccaggtcttaagctggttcccacgtgcattatactttcccaatttcgcaactacagaacaatgccaaggcataattaagatggcaaaggcagaactgaaaccatcatctttggctctccgcaaaggagaaacagcagaaaataccaaaggagttagaacaagttctggtatgtttatcagtgcatctgaagacaaaactggaattctggacctcattgaggagaaaatcgcaaaggcgactatgatccccaggacacacggagaggcatttaatgttttgcggtacgaaataggccagagttattattcacattatgatgcgtttgatccttctcaatatggtcctcagaagagccaaagggttgcatccctttttgttatatttatctgatgtggaagaaggtggagaaaccatgttccctttcgagaatgcacagaatatggatgttaattatgacttccgcaagtgtattggtctgaaagtgaagccgcgtagaggggatggactactattttactcgctgtttccaaatggtacaattgatccgacatctcttcacgggagctgtgcagtaatccgaggtgaaaaatgggttgccacaaagtggatcagggatcaagaaatggatgaataaacgagtacatgtctggaagtggtgttaatataattctttcgtaatttaatgtagccactcactggaacctttgagcgaattttacagtaaatatatctagtgtttgttcatattgatctgtgtcagttaacccttaatacgttacttgagtcttggttgctcccattacccacaaagctcaccccatcttgcagtaaaaaagaagtctaattgtaatgaccgtgcgaatgttttgtaataggatcagatcacgtgtttcaaaagtgttgtactaacacaaatattattatgacgctaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C00HBa0203P08-g3tq1/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C00HBa0203P08.2" temp_strand="-" temp_description="C00HBa0203P08.2  CU457813.5 htgs_phase:3 submitted_to_sgn_as:C04HBa0203P08 sequenced_by:sanger upload_account_name:uk">
        <position start="41875" stop="36046"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="41575" g_stop="41440" g_length="136"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="136" r_length="136" r_score="0.993"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="41439" i_stop="41370" i_length="70">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.637" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="41369" g_stop="41253" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="137" r_stop="253" r_length="117" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="41252" i_stop="40366" i_length="887">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.949" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="40365" g_stop="40208" g_length="158"/>
          <reference_exon_boundary r_type="cDNA" r_start="254" r_stop="411" r_length="158" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="40207" i_stop="39844" i_length="364">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.967" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="39843" g_stop="39741" g_length="103"/>
          <reference_exon_boundary r_type="cDNA" r_start="412" r_stop="514" r_length="103" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="39740" i_stop="38550" i_length="1191">
            <donor d_prob="0.952" d_score="1.00"/>
            <acceptor a_prob="0.968" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="38549" g_stop="38454" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="515" r_stop="610" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="38453" i_stop="37837" i_length="617">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.383" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="37836" g_stop="37771" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="611" r_stop="677" r_length="67" r_score="0.970"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="37770" i_stop="37682" i_length="89">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.942" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="37681" g_stop="37562" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="678" r_stop="797" r_length="120" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="37561" i_stop="36737" i_length="825">
            <donor d_prob="0.879" d_score="1.00"/>
            <acceptor a_prob="0.890" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="36736" g_stop="36336" g_length="401"/>
          <reference_exon_boundary r_type="cDNA" r_start="798" r_stop="1198" r_length="401" r_score="0.980"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C00HBa0203P08.2" gen_strand="-" ref_id="SGN-U324765" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>1197</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C00HBa0203P08.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U324765" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="41575" e_stop="41440"/>
          <exon e_start="41369" e_stop="41253"/>
          <exon e_start="40365" e_stop="40208"/>
          <exon e_start="39843" e_stop="39741"/>
          <exon e_start="38549" e_stop="38454"/>
          <exon e_start="37836" e_stop="37771"/>
          <exon e_start="37681" e_stop="37562"/>
          <exon e_start="36736" e_stop="36336"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGGAAGAAGATGAAGAGCAAAGGTAGATTAGTGGGACAAAGATGGCGGAGCATAGGGGGCTTACCTTCAATATTTCTGCTATGTCTTTTCTTGTTCTTCGCCGGTTTATTCGGTTCTACTCTCGTTTCTCATCAGGTATTTCCCTTATTATTTGCTAGACGCCTCTGTCATATGCGTTTCTAATCAAAGTGTTTGGGTGTGATAGGATGTACAACTACTTACTGTACGGCCTAGGTCAAGGGTGCTTAAATCTGTGGAAGAATTTGATGTTTTGCCTAATGGCGACACTGGAGAACACTCCCTTACTTCCATCCCCTTCCAGGTATATTTCATTGCTCAGTTCTCCTTGCTGAATTAGCGCTGGTTCGATTTCAAGTCTAACCGTTTTTGTTTGAAAAATTGTTCATACTGTAGTTGAACTTACATTAGTCCGCCAAGCTTTTTAATTATTGTTTCGATGTTCTCCTGGATTTGCACTTTTGGTTGGTTGATATGCGGATTTTCTCATAGCTATTTTATTTTGATTATCAACCGTTGAGATTGTTGCCGCTGATGCAATAATATTACTTTTCTTAATGTTGAAGTAGCATAACTTGATTTTTTCGGTAAGTAAACCAGATAGATAATGGCACAGCCCATTTGAATTGGTTTAAAAGTCGAGCAAATTACTTATCAATTTTTGACAAAAATAAAAAATAATTTAAAATAACTGAAATTGACTTAAAATAAATCAAAAATGACTTGAAATAAGTGAAAAATAAATTAAGATAGGTCTTCCTTGCTTTTTATTTTTTTAACTTGTTAAGTCATTTCCGTTTGACTTTTTAATTTCAACTTAAATAACTATTTTTGTAAGCCAATTCAAACGTGTTCTAAGTAAGTTTAAGAACAAATATGCATACTCTAATTTCTCTTATTCTGCCACTTCATCTACACTTTCTGCTTATATTTCTATGATTCCTGTTTTTCTATGGTTGACTGGGGGAAGATTTGTGTGGAGGAAGCAGTGAAGTAGGCATGTCATTAAGTCTATAGGCAAAATAGCTGGTAGCTGTGACTGATCATGTTAGCTTCCTAAACATAAACCTAAGCTGGTAAAAATTTTGTTCATGGTACTCATTGACTATAAAGTCTAGTATCTCTGATTTGCATTAGTATTCATTTGTTTTGGTTTATCTTATTTGACATCGACTTCAATCTTTTGGGTAGGTCTTAAGCTGGTTCCCACGTGCATTATACTTTCCCAATTTCGCAACTACAGAACAATGCCAAGGCATAATTAAGATGGCAAAGGCAGAACTGAAACCATCATCTTTGGCTCTCCGCAAAGGAGAAACAGCAGAAAATACCAAAGGAGTTAGAACAAGGTAAACAATACTCTGGTGTTCTATGTGTCCTGACTGATGTTTTGTCATAAATGCAATCTTTTCACTCTTTCCAAGCATTAGATTTAACTCTTAATACACTCATACTTCCATAATATCTATTTCTAGTAGACAAGATAAATATGTCACCAAAATTGAGTGTGTTCACATACATTTTCTACTTTTTTGGAAGATAAAATTGTTCATGGTGTTTGAACTGGCCATATGTCTCTGTCCTTTTTCAGGTCATTTGTTTTATATTTCTTTGATCTGTTGTCAAGACTATTTGATAAAAGTTTGCTGCCTCTTTTGGTTTTGACATGAAGTTACAATTTGAATGACTTTTGCTTTTCCCCCTTTCCCACAGTTCTGGTATGTTTATCAGTGCATCTGAAGACAAAACTGGAATTCTGGACCTCATTGAGGAGAAAATCGCAAAGGCGACTATGATCCCCAGGACACACGGAGAGGTGAATTTCATTTAAAACACACATCTTAAATATGACGCATGAAGTGGTTCTTACTGTGTATTAGTTTTATCATTCCATCCACACCTCAGAAATTGGATCTCAATAGAGGACATAATAGTTGTATTATTGGTGGGGAATCATTTTCCCAAGCTTCTTCATTTCCTTCCTCTTCTTCATCTTCTATTTTCTTGAAAACTATGTTGATTCAAGCTCTGGTTCTACTTCTACAAAATGCTGGACAACTATATTAGTGATTTTAGGTTTCCACTAGCAAATGCATTCTTCCAATTGTTATCAACACTGAAGAAAACAAGTCTTTTGGTGTTGGAGGTAAATATTAACTGGTTGTACAATCACATTTTTTTTTACCAGATTTAAGGCCATATATGTCAAACACCAAACATATTTTGGTCTTCGTGTTCTTTTCACCTCATATCTGAAAATTTAAATGGGTATCTGCTGCGGAAAGATGGAATTGGTCTGCTTTTGTTTTTGGACAGATCAGTATGTGTTAGCAATGGCAAGATTAAATTGACACTACAATGATCATTGAATGGAAATGATATGATTATTTTTTGTCCGAATCATTCATACCGTACCAATATAGATTTTTGTCAAAGGTTTCACATGGAAATTTAACTTGAAAATCCTATATATATTTCCATTTGAAAGCTTTTTGTTCCAATTTTACTTATGCAAAAGAGCTCATTCGATGTAATTGACGGTTCGTTTCCTCTTCTATATGAACTATCCAGCTGTCACATGGTCTAGTCTGTATGTATTCTAACAAGAGACCATGACAAAACAATGAGGCAACAGATCAAGGTGTGCATTTTAACAGGAAGTTAGAGAACTGAACATCTCTTGCTGCTGTATACTTTAATTTATAGTTGGGGATATCTGGCTTTTGAGTATTATCTGAAACTGGAGTTCTTTTGCTGGATTCCCGGATATTTGTTCGATTTCGTCCTAGAATTGAGTCAAATGTGATGATGCAAATAATTCTTGCTATGTACATTATGCATCTGATAAATAATAGGTAGTCAGGCTGTAACCCCTTTGTGTCTGGACTTTCTCTTATTTTCATATAGTGATTCTGAATGATTTTTCTGTTAATGAAAGCTCCAAGTATGGTGTACAGTGATCATAATTGCTGTTTAACTTGAATCAGTTGACCTGTGCGTTTTTCAGGCATTTAATGTTTTGCGGTACGAAATAGGCCAGAGTTATTATTCACATTATGATGCGTTTGATCCTTCTCAATATGGTCCTCAGAAGAGCCAAAGGGTATGCACTATCTACTTGGGTAAATTGTTGCTGTTAACTTTTCCAATTGACTTCTTAAATTTTTTACTAGCTCAATTCTTGCACAAACTAGCATAATGAATGGTGCATGGATTTGAGTGTTTGGTTATTGGGATAAGATGGTGTTGTTTTTCATATGCATGTTTCTTCCAATCCTCCTCCATCAAAAATATTTTTAGAATGGGGAAAATAAAGTTTGTTTGAAGCTATGGTTCATAAGACACTAGTTTGCAGATCCATTTCAATGACTTAATTTATACATGGAATCACCAATGGTGTGTTATCTGGATCACCACAAGGTGTATACAGCATTTCTTCCATTTAGAACTTTGTGGAACCCACATTAGTTTTATCCTTAATAAGCATATAGTTTTATCCGTTATATACATCTCTTTTTCTTTTATTTTCGCCCCTTTTGATGAAAAAGTTCTGTTTTTTGTCATCGATCCTTACATAACCATCATTTGTGGAGTGTTTAGAGCAAGTGTGCCATAGACTATAACTATGAAATTTGACATTTCATAATAGCTCAAATTGCAGTTAATTTTGAGTAATGATTATTTTCAGGGCCAGTCTAAAAATAATGTATTTTCATTTAGGTTGCAT-CCTTTTTGTTATATTTATCTGATGTGGAAGAAGGTGGAGAAACCATGTTCCCTTTCGAGGTGAGTTCAAAGTTGTTTCTTCTTTCGTGGACTATTATTATATTTCTGCCTCTCATGTCGTGTAAATAAGTCCTTTGGTTAATTTACAGAATGCACAGAATATGGATGTTAATTATGACTTCCGCAAGTGTATTGGTCTGAAAGTGAAGCCGCGTAGAGGGGATGGACTACTATTTTACTCGCTGTTTCCAAATGGTACAATTGATCCGGTGAGTATTTGCTTGTAGATTTTAGTGTGATCGCCGTATTTCTTTGCATACAAAAGAAGTCTGATCCTTGGGGGGTAGGCCATCATCTACCGGAGCCATGTGCCTAGTCTCGAGGATCTCTGTTATTTTAACAAGGGTTGGTCATAACAGCTATGCAGCAAGCCAAGCATATTGTGAACCATTTATGACCTTATACTTTATAGCAGATGAATAGTATAAAGTGGATTTATATGATGCTGTTATGAAAATTTGTTACAAATGAGATTATCAGCAATAGGTTTGTTGGAACAGAAGACAAACTTTCTGTGCTCTTTTGCAGCGCGGTATACCATCATGCGCAGAGCTGTGATTCTTTTAGGATTTTAAAGCATTAGGAGTTGCCCACAGAATTAAAGATGATAAAGTTAAAGAAATGCCTACATCTTTCCAATGTCTTATTTGCTTTTGGTTTTGTTCTTTTTGTTTGTTTTGCTGTGTGTTTTCTTATTTCCTTTCTGCGGGAACCGTTCTTGATCAATCTGTCTACCATGATGCTATGGAGATGTTTGCTGAAGAGTCGCTATGGTGCTGCTAAAATCATTTTTGCTGATTGTGATTTATCAGTGTGAATGGTAGCGCATATTAGGTACCACCCCATCGAACAGATACTGATGGGAAAGGTTATAATATTGGTTCCCGTATGGCCTGTTTCACTGTTTCATTTTCTGTTGCTGATTCATCTCCTCTGGCTACTACTGGTTATAAAGCTGAATACTGATTACCAACATTATATCAGACTGCTCATGTTGGCTTGCAGTTACTCACATTTGTAAATCTCTTATGTAGACATCTCTTCACGGGAGCTGTGCAGTAATCCGAGGTGAAAAATGGGTTGCCACAAAGTGGATCAGGGATCAAGAAATGGATGAATAAACGAGTACATGTCTGGAAGTGGTGTTAATATAATTCTTTCGTAATTTAATGTAGCCACTCACTGGAACCTTTGAGCGAATTTTACAGTAAATATATCTAGTGTTTGTTCATATTGATCTGTGTCAGTTAACCCTTAATACGTTACTTGAGTCTTGGTTGCTCCCATTACCCACAAAGCTCACCCCATCTTGCAGTAAAAAAGAAGTCTAATTGTAATGACCGTGCGAATGTTTTGTAATAGGATCAGATCACGTGTTTCAAAAGTGTTGTACTAACACAAATATTATTATGACGCTAAAAAGAATGTGTATAGA</genome_strand>
        <mrna_strand>CGGGAAGAAGATGAAGAGCAAAGGTAGATTAGTGGGACAAAGATGGCGGAGCATAGGGGGCTTACCTTCAATATTTCTGCTATGTCTTTTCTTGTTCTTCGCCGGTTTATTCGGTTCTACTCTCGTTTCTCATCAG......................................................................GATGTACAACTACTTACTGTACGGCCTAGGTCAAGGGTGCTTAAATCTGTGGAAGAATTTGATGTTTTGCCTAATGGCGACACTGGAGAACACTCCCTTACTTCCATCCCCTTCCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTTAAGCTGGTTCCCACGTGCATTATACTTTCCCAATTTCGCAACTACAGAACAATGCCAAGGCATAATTAAGATGGCAAAGGCAGAACTGAAACCATCATCTTTGGCTCTCCGCAAAGGAGAAACAGCAGAAAATACCAAAGGAGTTAGAACAAG............................................................................................................................................................................................................................................................................................................................................................................TTCTGGTATGTTTATCAGTGCATCTGAAGACAAAACTGGAATTCTGGACCTCATTGAGGAGAAAATCGCAAAGGCGACTATGATCCCCAGGACACACGGAGAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATTTAATGTTTTGCGGTACGAAATAGGCCAGAGTTATTATTCACATTATGATGCGTTTGATCCTTCTCAATATGGTCCTCAGAAGAGCCAAAGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCATCCCTTTTTGTTATATTTATCTGATGTGGAAGAAGGTGGAGAAACCATGTTCCCTTTCGAG.........................................................................................AATGCACAGAATATGGATGTTAATTATGACTTCCGCAAGTGTATTGGTCTGAAAGTGAAGCCGCGTAGAGGGGATGGACTACTATTTTACTCGCTGTTTCCAAATGGTACAATTGATCCG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACATCTCTTCACGGGAGCTGTGCAGTAATCCGAGGTGAAAAATGGGTTGCCACAAAGTGGATCAGGGATCAAGAAATGGATGAATAAACGAGTACATGTCTGGAAGTGGTGTTAATATAATTCTTTCGTAATTTAATGTAGCCACTCACTGGAACCTTTGAGCGAATTTTACAGTAAATATATCTAGTGTTTGTTCATATTGATCTGTGTCAGTTAACCCTTAATACGTTACTTGAGTCTTGGTTGCTCCCATTACCCACAAAGCTCACCCCATCTTGCAGTAAAAAAGAAGTCTAATTGTAATGACCGTGCGAATGTTTTGTAATAGGATCAGATCACGTGTTTCAAAAGTGTTGTACTAACACAAATATTATTATGACGCTAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C00HBa0203P08-g3tq1/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U315914" ref_strand="+" ref_description="SGN-U315914        Tomato 200607 #1 [34 ESTs aligned] arabidopsis/peptide: | Symbol: None | expressed protein, similar to unknown protein (gb:AAC18972.1) | chr5:26894794-26896768 REVERSE | Aliases: K8K14.9, K8K14_9(evalue: 1e-109, score=393) genbank/nr: gi|15240715|ref|NP_201538.1| expressed protein [Arabidopsis thaliana] gi|9758436|dbj|BAB09022.1| gb|AAC18972.1~gene_id:K8K14.9~similar to unknown protein [Arabidopsis thaliana] gi|13430430|gb|AAK25837.1| unknown protein [Arabidopsis thaliana] gi|15293189|gb|AAK93705.1| unknown protein [Arabidopsis thaliana](evalue: 8e-108, score=393)">
      <seq>aattctccatcacgtatgatgcatggtcaaaaaaaaaaaaagaacttctatctagctactttttcttctgaattctatggttgcaagaaaattcacaaatgctaaggctaaatttatatggctccatagtttctagtccgatagaagtcaacaaaagctgccgctcgtggatcattttatcgaacaaagcaacgattgtatgtcggaggaacattcgagttaaagccctgaaagatgggatgaacggtggcacgaatggcagtggattaggtggtcgtagttgggacccaggcttggaaattgaggtgccatttgaacaaaggccggtgaatgagtactcatctctgaaagatgaaactttatactcttgggcagaactgggtccaggggccttcttcctacgtctcgggggactttggttagtcactttcgcagttttgggagtacctattgctgctgcaagcttcaatccttcaaaggatcctttaagatttctcctggctgcaagtacggggactctttttcttgttgcactgattgtcctaagaatttatctgggatggagctatgttggagataggcttttatcagcagttataccttatgaagagactggatggtatgatgggcagatgtgggtgaagcccccagagatcttagctcgggataggctgttgggatcttataaggtgaaaccagtcattaaaatgctgaagcaaacgctagttggaacaggggctttgcttgttgcagcagtctcattattcatatttgcaacaccagtagaagattttttccgcaatactttcacaacaaacgagaactcattgagttccacctcaacaaacagcacaaataaactaggcatcaggaaagaagaactgttgcgcttgccactggaagtcaaggaggacgatgatctagcaaaagctgccgctgaagcagctgatggaaggccagtttactgcagagataggtattatcgtgcattggccggtggacagtactgcaaatgggaagacttagttaaataagaggatatatataagtgaagaaagctacagttaaattctgtgattgctcaaaagatctgtacaattgagcctcttcttataattttaacgaagaaattttgatgttttatgcattagataatgggcatgcaaagaacaaaagaaagagaatcatacccccaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C00HBa0203P08-g3tq1/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C00HBa0203P08.2" temp_strand="+" temp_description="C00HBa0203P08.2  CU457813.5 htgs_phase:3 submitted_to_sgn_as:C04HBa0203P08 sequenced_by:sanger upload_account_name:uk">
        <position start="46973" stop="50626"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="47273" g_stop="47597" g_length="325"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="326" r_length="326" r_score="0.991"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="47598" i_stop="48082" i_length="485">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.115" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="48083" g_stop="48235" g_length="153"/>
          <reference_exon_boundary r_type="cDNA" r_start="327" r_stop="479" r_length="153" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="48236" i_stop="48411" i_length="176">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.849" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="48412" g_stop="48489" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="480" r_stop="557" r_length="78" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="48490" i_stop="48657" i_length="168">
            <donor d_prob="0.831" d_score="1.00"/>
            <acceptor a_prob="0.341" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="48658" g_stop="48753" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="558" r_stop="653" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="48754" i_stop="49592" i_length="839">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="49593" g_stop="49628" g_length="36"/>
          <reference_exon_boundary r_type="cDNA" r_start="654" r_stop="689" r_length="36" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="49629" i_stop="49741" i_length="113">
            <donor d_prob="0.959" d_score="0.00"/>
            <acceptor a_prob="0.334" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="49742" g_stop="49923" g_length="182"/>
          <reference_exon_boundary r_type="cDNA" r_start="690" r_stop="871" r_length="182" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="49924" i_stop="50000" i_length="77">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="50001" g_stop="50325" g_length="325"/>
          <reference_exon_boundary r_type="cDNA" r_start="872" r_stop="1196" r_length="325" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="1197" polyA_stop="1232"/>
      <MATCH_line gen_id="C00HBa0203P08.2" gen_strand="+" ref_id="SGN-U315914" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>1195</cumulative_length_of_scored_exons>
        <coverage percentage="0.970" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C00HBa0203P08.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U315914" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="47273" e_stop="47597"/>
          <exon e_start="48083" e_stop="48235"/>
          <exon e_start="48412" e_stop="48489"/>
          <exon e_start="48658" e_stop="48753"/>
          <exon e_start="49593" e_stop="49628"/>
          <exon e_start="49742" e_stop="49923"/>
          <exon e_start="50001" e_stop="50325"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATTTTCCATCACGTATGATGCATGGTCAAAAAAAAAAA-AGAACTTCTATCTAGCTACTTTTTCTTCTGAATTCTATGGTTGCAAGAAAATTCACAAATGCTAAGGCTAAATTTATATGGCTCCATAGTTTCTAGTCCGATAGAAGTCAACAAAAGCTGCCGCTCGTGGATCATTTTATCGAACAAAGCAACGATTGTATGTCGGAGGAACATTCGAGTTAAAGCCCTGAAAGATGGGATGAACGGTGGCACGAATGGCAGTGGATTAGGTGGTCGTAGTTGGGACCCAGGCTTGGAAATTGAGGTGCCATTTGAACAAAGGCCGGTATGTTCTCAATTCTTTGTATTCATTCCTGGCCTCATCCATTTGATCCAATCTGCAGAAATCAATAGAAAAGACTCATCTCAGTTCACATACTAGTTTAGATTTATACACTATTACTCTGATAGTGTAAAGATTTTATATGCTGTTCTTATTGTCCCACTTGTGATAGAACTTTTCTTTAGCTTAATCATAGAGATTGGTTTGCAATCTCCCTATAACTGACCTGGTTCTGTAAATATTCTTACACTCTCAGTGTAAAAAACTTAAAACTAGTCCTGAGAAGGCCACAAGATCTGCACAGATGAGACATGCCATTATACGATAAACTTCTAATGCAGGTTATAGGATTATTGAAATGATAAAACTGACTCAGTAAATTACTTTTCAACATGTACTAAATTTCTGAAGTTCCATAAGGACGGAGGACTTGATATGGAGATGGGTGAGCAATTTAAAGTATTAACTAAGCTAGTGCTTTTTACCAGGTGAATGAGTACTCATCTCTGAAAGATGAAACTTTATACTCTTGGGCAGAACTGGGTCCAGGGGCCTTCTTCCTACGTCTCGGGGGACTTTGGTTAGTCACTTTCGCAGTTTTGGGAGTACCTATTGCTGCTGCAAGCTTCAATCCTTCAAAGGTAAATTGTTAACTTTGTGCAAGTTCTTTCTCTCAGGAGAGTTCCAAAGTGATTACTCAAGTGTCAATAGTAAACAAAGAGCTTTCGTTTTCTTTCTTCATTTATTTCTAAGTCAAAAATAAAATCAAAGAATCCTCACAATCATTGACATTCAATTTTTCATAATCCTCCTGCAGGATCCTTTAAGATTTCTCCTGGCTGCAAGTACGGGGACTCTTTTTCTTGTTGCACTGATTGTCCTAAGAATTTATCTGGTAAAGTTCTTCAATTGCAGGACTTCAATTTTTTGGTCAAATCATTTAGATCACATTCAATCAATGACCATAATAGGGATAGGAGCTCCGCTGGAGATAGATAATTTGAGAACTTAACTTCTCTAATATTCTACGTAACATTCTAATTCCTGACAATGACCACAATAGGGATGGAGCTATGTTGGAGATAGGCTTTTATCAGCAGTTATACCTTATGAAGAGACTGGATGGTATGATGGGCAGATGTGGGTGAAGCCCCCAGAGGTTAGTGGTCTTTCCTTTGCATACTTATTTAACAGGTTCTTTCTCTTTGCTTCCTCTGTTCCTCCTCATTCCCACAGTAGGAAAATATTGCCAGCTTCAAAATGGATAAATTAGCTTCAATCCAGTTCACTAAAATAGGTCATTTATACTAGTTACATCAAGCACATCTAAGTAAAGTAAGTCAAGTTGAACTCTTTTGTTAAAAAAAGAAGGTTAACAATATGAACTTTAATCATTGACAAACTGAATCTAACAAGTGCTCATGGATATGAAGAATACATAGCTAGCAACAAGGGGGAAATGGTGTAATATTGCTTGACAAGAATTGTATCACATAATAGATAAGAGCAAGCGCCCAGAGCCCTAACGACTAACAGTGAGGTGAAAATGGTCCAATATAGCATGAAATGGACTTAAAATTTGGTATCACAAATAAAACGCGGGAAATGAAGCTACATGTGAAAGCAATAAGTTGTACTTCCTTGTGTTGGTTAAATCATCAGTCCTTGCACAATACCCTTTTCTTCTTAGCACAAACAGCTATACTAAAGATTTCAATAAAATAGGTTCTTACTTTTCATGGTATAGAAATGTAGTTATCTTTCCGTGAAACTTTGAGCAACAGATCTTCTAGAAAGTAATAGCATTATCTTTTACAATAACACTACATGATGGAACAACGTCTATACATGAAGCTAATATTAGTTCCGCACTTGTAATAATTCATGCTCTAAAAGTCTATAGCCACCTGCACTTCTTGAAAAATTTATCAGAATCCAAGCTCTAAAAGTCTGTAATGATGTTGCACGTATGACATTTAATGTGATTATTCCTTGCAGATCTTAGCTCGGGATAGGCTGTTGGGATCTTATAAGGTACCAGATTGATCTATAAAATTCATCAGCTGGTTACATCATATTCTAACTGTCAATAGAGTAGATCTTTCCTATTACGAGCTTGACAAAGCTGAAAGAATTTATTTACCTAGGTGAAACCAGTCATTAAAATGCTGAAGCAAACGCTAGTTGGAACAGGGGCTTTGCTTGTTGCAGCAGTCTCATTATTCATATTTGCAACACCAGTAGAAGATTTTTTCCGCAATACTTTCACAACAAACGAGAACTCATTGAGTTCCACCTCAACAAACAGCACAAATAAACTAGGCATCAGGTAATTCTATTGAAAACTTAAGAAGTACAATACTATAAAATTTCATGAGCTTACGTTGTTTCGCTATGTAATTAAAGGAAAGAAGAACTGTTGCGCTTGCCACTGGAAGTCAAGGAGGACGATGATCTAGCAAAAGCTGCCGCTGAAGCAGCTGATGGAAGGCCAGTTTACTGCAGAGATAGGTATTATCGTGCATTGGCCGGTGGACAGTACTGCAAATGGGAAGACTTAGTTAAATAAGAGGATATATATAAGTGAAGAAAGCTACAGTTAAATTCTGTGATTGCTCAAAAGATCTGTACAATTGAGCCTCTTCTTATAATTTTAACGAAGAAATTTTGATGTTTTATGCATTAGATAATGCGCATGCAAAGAACAAAAGAAAGAGAATCATAACCCAAA</genome_strand>
        <mrna_strand>AATTCTCCATCACGTATGATGCATGGTCAAAAAAAAAAAAAGAACTTCTATCTAGCTACTTTTTCTTCTGAATTCTATGGTTGCAAGAAAATTCACAAATGCTAAGGCTAAATTTATATGGCTCCATAGTTTCTAGTCCGATAGAAGTCAACAAAAGCTGCCGCTCGTGGATCATTTTATCGAACAAAGCAACGATTGTATGTCGGAGGAACATTCGAGTTAAAGCCCTGAAAGATGGGATGAACGGTGGCACGAATGGCAGTGGATTAGGTGGTCGTAGTTGGGACCCAGGCTTGGAAATTGAGGTGCCATTTGAACAAAGGCCG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAATGAGTACTCATCTCTGAAAGATGAAACTTTATACTCTTGGGCAGAACTGGGTCCAGGGGCCTTCTTCCTACGTCTCGGGGGACTTTGGTTAGTCACTTTCGCAGTTTTGGGAGTACCTATTGCTGCTGCAAGCTTCAATCCTTCAAAG................................................................................................................................................................................GATCCTTTAAGATTTCTCCTGGCTGCAAGTACGGGGACTCTTTTTCTTGTTGCACTGATTGTCCTAAGAATTTATCTG........................................................................................................................................................................GGATGGAGCTATGTTGGAGATAGGCTTTTATCAGCAGTTATACCTTATGAAGAGACTGGATGGTATGATGGGCAGATGTGGGTGAAGCCCCCAGAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTTAGCTCGGGATAGGCTGTTGGGATCTTATAAG.................................................................................................................GTGAAACCAGTCATTAAAATGCTGAAGCAAACGCTAGTTGGAACAGGGGCTTTGCTTGTTGCAGCAGTCTCATTATTCATATTTGCAACACCAGTAGAAGATTTTTTCCGCAATACTTTCACAACAAACGAGAACTCATTGAGTTCCACCTCAACAAACAGCACAAATAAACTAGGCATCAG.............................................................................GAAAGAAGAACTGTTGCGCTTGCCACTGGAAGTCAAGGAGGACGATGATCTAGCAAAAGCTGCCGCTGAAGCAGCTGATGGAAGGCCAGTTTACTGCAGAGATAGGTATTATCGTGCATTGGCCGGTGGACAGTACTGCAAATGGGAAGACTTAGTTAAATAAGAGGATATATATAAGTGAAGAAAGCTACAGTTAAATTCTGTGATTGCTCAAAAGATCTGTACAATTGAGCCTCTTCTTATAATTTTAACGAAGAAATTTTGATGTTTTATGCATTAGATAATGGGCATGCAAAGAACAAAAGAAAGAGAATCATACCCCCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C00HBa0203P08-g3tq1/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U341095" ref_strand="-" ref_description="SGN-U341095        Tomato 200607 #1 [1 ESTs aligned]">
      <seq>tatcccaactttcaagtttggttttttggttagagttcgttaacaggcaaaaaaaagcttaatccgaatgatggcaagaattatatagatatataatgatattagttagtaaaccaactaccaaatgtaggggtaatttttttttcttttttgaatattaagttgtggtgcatagtgtttcatccttaactaaagattttatgttcgagctcaagtatgaaaaaaaattttgttgggagcatcccctcgaatggattttacaaagcgcaattcaaattcgatcgaagctccaatacggattttgaacactttggccgaaaaaaaaagctttttgaaaattttctttctttctttgtaggatacatgcaagaaaatatgtatcgccagttttctctttaaatgtcctattgattgtagttaccttgaagattttgtacaaggctccatttgggaatattttgcaaattatcttatcatgtttgttatataaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C00HBa0203P08-g3tq1/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C00HBa0203P08.2" temp_strand="-" temp_description="C00HBa0203P08.2  CU457813.5 htgs_phase:3 submitted_to_sgn_as:C04HBa0203P08 sequenced_by:sanger upload_account_name:uk">
        <position start="55745" stop="54656"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="55445" g_stop="54957" g_length="489"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="489" r_length="489" r_score="0.973"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="490" polyA_stop="527"/>
      <MATCH_line gen_id="C00HBa0203P08.2" gen_strand="-" ref_id="SGN-U341095" ref_strand="-">
        <total_alignment_score>0.973</total_alignment_score>
        <cumulative_length_of_scored_exons>489</cumulative_length_of_scored_exons>
        <coverage percentage="0.928" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C00HBa0203P08.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U341095" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="55445" e_stop="54957"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATCACAACTTTCAAGTTTGGTTTTTTGGTTAGAGTTCGTTAACAGGCAAAAAGAAGCTTAATCCGAATGATGGCAAGAATTATATAGATATATAATGATATTAGTTAGTAAACCAACTACCAAATGTATGCGTAATTTTTTTTTCTTTTTTGTATATTAAGTTGTGGTGCATAGTGTTTCATCCTTAACTAGAGATTTTATGTTCGAGCTCAAGTATGAAAGAAAATTTTGTTGGGAGCATCACCTCGAATGGATCTTACAAAGCGCAATTCAAATTCGATCGAAGCTCCAATACGGATTTTGAACACTTTGGCCGAAAAAAAAAGCTTTTTGGATATTTTCTTTCTTTCTTTGTAGGATACATGCAAGAAAATATGTATCGACAGTTTTCTCTTTATATGTCCTATTGATTGTAGTTACCTTGAAGATTTTGTACAAGGCTCCATTTGGGAATATTTTGCAAATTATCTTATCATGTTTGTTATATA</genome_strand>
        <mrna_strand>TATCCCAACTTTCAAGTTTGGTTTTTTGGTTAGAGTTCGTTAACAGGCAAAAAAAAGCTTAATCCGAATGATGGCAAGAATTATATAGATATATAATGATATTAGTTAGTAAACCAACTACCAAATGTAGGGGTAATTTTTTTTTCTTTTTTGAATATTAAGTTGTGGTGCATAGTGTTTCATCCTTAACTAAAGATTTTATGTTCGAGCTCAAGTATGAAAAAAAATTTTGTTGGGAGCATCCCCTCGAATGGATTTTACAAAGCGCAATTCAAATTCGATCGAAGCTCCAATACGGATTTTGAACACTTTGGCCGAAAAAAAAAGCTTTTTGAAAATTTTCTTTCTTTCTTTGTAGGATACATGCAAGAAAATATGTATCGCCAGTTTTCTCTTTAAATGTCCTATTGATTGTAGTTACCTTGAAGATTTTGTACAAGGCTCCATTTGGGAATATTTTGCAAATTATCTTATCATGTTTGTTATATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C00HBa0203P08-g3tq1/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U317725" ref_strand="+" ref_description="SGN-U317725        Tomato 200607 #1 [8 ESTs aligned] arabidopsis/peptide: | Symbol: None | cucumisin-like serine protease (ARA12), Asp48; almost identical to cucumisin-like serine protease (ARA12) GI:3176874 from (Arabidopsis thaliana) | chr5:26889117-26891805 REVERSE | Aliases: K8K14.8, K8K14_8(evalue: 0, score=734) genbank/nr: gi|18425181|ref|NP_569048.1| subtilisin-like serine protease ARA12 [Arabidopsis thaliana] gi|25289825|pir||JC7519 subtilisin-like serine proteinase (EC 3.4.21.-) - Arabidopsis thaliana gi|3176874|gb|AAC18851.1| cucumisin-like serine protease [Arabidopsis thaliana] gi|9758435|dbj|BAB09021.1| cucumisin-like serine protease [Arabidopsis thaliana] gi|13430746|gb|AAK25995.1| putative subtilisin serine protease ARA12 [Arabidopsis thaliana] gi|23296832|gb|AAN13181.1| putative subtilisin serine protease ARA12 [Arabidopsis thaliana](evalue: 0, score=734)">
      <seq>gcctttttggttatgcttcaggaactgctcgtggaatggcttatcgtgccagagttgccgtctacaaggtttgctggcttgggaaatgctttggccccgacatattggcaggtatggacaaagccattgatgataatgttaatgtgctttcattatcacttggtggagagcattttgatttctacagcgacgatgttgcaattggagcatttgctgcaatggagaagggtattatggtttcttgctctgctggaaatgctggacccaatcaattcagtttggctaaccaagcaccttggatcaccaccgtgggtgccggaacagttgaccgtgattttccagcatatgtaagccttggcaatggtaaaaatttctccggtgtttcactttacgcgggtgatccattacccagtgggatgcttcccttggtgtatgcaggtaatgccagcaatgcaaccaatggaaatctctgtataatgggaaccttaattcctgagaaagttaaaggcaaaattgtgctgtgtgacggaggggttaacgtcagagctgaaaagggttatgtggtaaaatcagccggtggagccggcatgatttttgctaacacaaatgggctggggctactggctgacgcccatttacttccagcggcggctgtgggtcaattagatggcgatgaaatcaagaagtatataacatcagatcctaatccaacggccacgattctttttggaggaacaatggtaggagtccaaccagcaccgattcttgcagcgttcagttccagaggcccaaattccatcacgccggagatacttaagccggatatcatcgcgccaggtgtcaatattctggccggttggagcggtgcagtcggtcctacggggttgcctgaggacgatagacgggtcgagttcaacattatctcaggcacatccatgtcgtgtccacacgtgagtggcttagcggctttgctcaaaggagtccacccagaatggagccccgccgccattcgttcggcgctcatgaccaccgcttacaccacctacaggaacggcggagcactactagacgtagctaccggaaaaccatctacacctttcggtcacggcgctgggcacgtggatcccgtttcagcggtgaacccaggtcttgtttacgacataaacgccgatgattacctcaatttcctgtgtgcattgaaatacagtccatcacaaatcaatatcatagcaagaagaaacttcacatgtgattcaagcaaaatatacagcgtcacagatttgaattacccttcgttttcagttgcattccctgccgataccggttcaaacacaatcagatacagccggacactgactaatgttggaccgtctggaacatacaaagttgctgttactttgcccgatagttccgtggaaattatagttgaacctgaaacagttagttttactcagattaatgagaagatatcgtatagtgtgagttttactgctccatcaaagcccccatctaccaatgtattcggcaaaattgagtggtcagatgggacgcatttggtcactagtccagttgcaatttcttggtcatgaattatatgaacaaattanagagctatatatagctgctatcgatttaatgtaaagttaatcaaagaaatttatgcttcttgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C00HBa0203P08-g3tq1/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C00HBa0203P08.2" temp_strand="+" temp_description="C00HBa0203P08.2  CU457813.5 htgs_phase:3 submitted_to_sgn_as:C04HBa0203P08 sequenced_by:sanger upload_account_name:uk">
        <position start="57104" stop="59374"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="57404" g_stop="59074" g_length="1671"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="1671" r_length="1671" r_score="0.999"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C00HBa0203P08.2" gen_strand="+" ref_id="SGN-U317725" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>1671</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C00HBa0203P08.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U317725" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="57404" e_stop="59074"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCCTTTTTGGTTATGCTTCAGGAACTGCTCGTGGAATGGCTTATCGTGCCAGAGTTGCCGTCTACAAGGTTTGCTGGCTTGGGAAATGCTTTGGCCCCGACATATTGGCAGGTATGGACAAAGCCATTGATGATAATGTTAATGTGCTTTCATTATCACTTGGTGGAGAGCATTTTGATTTCTACAGCGACGATGTTGCAATTGGAGCATTTGCTGCAATGGAGAAGGGTATTATGGTTTCTTGCTCTGCTGGAAATGCTGGACCCAATCAATTCAGTTTGGCTAACCAAGCACCTTGGATCACCACCGTGGGTGCCGGAACAGTTGACCGTGATTTTCCAGCATATGTAAGCCTTGGCAATGGTAAAAATTTCTCCGGTGTTTCACTTTACGCGGGTGATCCATTACCCAGTGGGATGCTTCCCTTGGTGTATGCAGGTAATGCCAGCAATGCAACCAATGGAAATCTCTGTATAATGGGAACCTTAATTCCTGAGAAAGTTAAAGGCAAAATTGTGCTGTGTGACGGAGGGGTTAACGTCAGAGCTGAAAAGGGTTATGTGGTAAAATCAGCCGGTGGAGCCGGCATGATTTTTGCTAACACAAATGGGCTGGGGCTACTGGCTGACGCCCATTTACTTCCAGCGGCGGCTGTGGGTCAATTAGATGGCGATGAAATCAAGAAGTATATAACATCAGATCCTAATCCAACGGCCACGATTCTTTTTGGAGGAACAATGGTAGGAGTCCAACCAGCACCGATTCTTGCAGCGTTCAGTTCCAGAGGCCCAAATTCCATCACGCCGGAGATACTTAAGCCGGATATCATCGCGCCAGGTGTCAATATTCTGGCCGGTTGGAGCGGTGCAGTCGGTCCTACGGGGTTGCCTGAGGACGATAGACGGGTCGAGTTCAACATTATCTCAGGCACATCCATGTCGTGTCCACACGTGAGTGGCTTAGCGGCTTTGCTCAAAGGAGTCCACCCAGAATGGAGCCCCGCCGCCATTCGTTCGGCGCTCATGACCACCGCTTACACCACCTACAGGAACGGCGGAGCACTACTAGACGTAGCTACCGGAAAACCATCTACACCTTTCGGTCACGGCGCTGGGCACGTGGATCCCGTTTCAGCGGTGAACCCAGGTCTTGTTTACGACATAAACGCCGATGATTACCTCAATTTCCTGTGTGCATTGAAATACAGTCCATCACAAATCAATATCATAGCAAGAAGAAACTTCACATGTGATTCAAGCAAAATATACAGCGTCACAGATTTGAATTACCCTTCGTTTTCAGTTGCATTCCCTGCCGATACCGGTTCAAACACAATCAGATACAGCCGGACACTGACTAATGTTGGACCGTCTGGAACATACAAAGTTGCTGTTACTTTGCCCGATAGTTCCGTGGAAATTATAGTTGAACCTGAAACAGTTAGTTTTACTCAGATTAATGAGAAGATATCGTATAGTGTGAGTTTTACTGCTCCATCAAAGCCCCCATCTACCAATGTATTCGGCAAAATTGAGTGGTCAGATGGGACGCATTTGGTCACTAGTCCAGTTGCAATTTCTTGGTCATGAATTATATGAACAAATTAAAGAGCTATATATAGCTGCTATCGATTTAATGTAAAGTTAATCAAAGAAATTTATGCTTCTTGCT</genome_strand>
        <mrna_strand>GCCTTTTTGGTTATGCTTCAGGAACTGCTCGTGGAATGGCTTATCGTGCCAGAGTTGCCGTCTACAAGGTTTGCTGGCTTGGGAAATGCTTTGGCCCCGACATATTGGCAGGTATGGACAAAGCCATTGATGATAATGTTAATGTGCTTTCATTATCACTTGGTGGAGAGCATTTTGATTTCTACAGCGACGATGTTGCAATTGGAGCATTTGCTGCAATGGAGAAGGGTATTATGGTTTCTTGCTCTGCTGGAAATGCTGGACCCAATCAATTCAGTTTGGCTAACCAAGCACCTTGGATCACCACCGTGGGTGCCGGAACAGTTGACCGTGATTTTCCAGCATATGTAAGCCTTGGCAATGGTAAAAATTTCTCCGGTGTTTCACTTTACGCGGGTGATCCATTACCCAGTGGGATGCTTCCCTTGGTGTATGCAGGTAATGCCAGCAATGCAACCAATGGAAATCTCTGTATAATGGGAACCTTAATTCCTGAGAAAGTTAAAGGCAAAATTGTGCTGTGTGACGGAGGGGTTAACGTCAGAGCTGAAAAGGGTTATGTGGTAAAATCAGCCGGTGGAGCCGGCATGATTTTTGCTAACACAAATGGGCTGGGGCTACTGGCTGACGCCCATTTACTTCCAGCGGCGGCTGTGGGTCAATTAGATGGCGATGAAATCAAGAAGTATATAACATCAGATCCTAATCCAACGGCCACGATTCTTTTTGGAGGAACAATGGTAGGAGTCCAACCAGCACCGATTCTTGCAGCGTTCAGTTCCAGAGGCCCAAATTCCATCACGCCGGAGATACTTAAGCCGGATATCATCGCGCCAGGTGTCAATATTCTGGCCGGTTGGAGCGGTGCAGTCGGTCCTACGGGGTTGCCTGAGGACGATAGACGGGTCGAGTTCAACATTATCTCAGGCACATCCATGTCGTGTCCACACGTGAGTGGCTTAGCGGCTTTGCTCAAAGGAGTCCACCCAGAATGGAGCCCCGCCGCCATTCGTTCGGCGCTCATGACCACCGCTTACACCACCTACAGGAACGGCGGAGCACTACTAGACGTAGCTACCGGAAAACCATCTACACCTTTCGGTCACGGCGCTGGGCACGTGGATCCCGTTTCAGCGGTGAACCCAGGTCTTGTTTACGACATAAACGCCGATGATTACCTCAATTTCCTGTGTGCATTGAAATACAGTCCATCACAAATCAATATCATAGCAAGAAGAAACTTCACATGTGATTCAAGCAAAATATACAGCGTCACAGATTTGAATTACCCTTCGTTTTCAGTTGCATTCCCTGCCGATACCGGTTCAAACACAATCAGATACAGCCGGACACTGACTAATGTTGGACCGTCTGGAACATACAAAGTTGCTGTTACTTTGCCCGATAGTTCCGTGGAAATTATAGTTGAACCTGAAACAGTTAGTTTTACTCAGATTAATGAGAAGATATCGTATAGTGTGAGTTTTACTGCTCCATCAAAGCCCCCATCTACCAATGTATTCGGCAAAATTGAGTGGTCAGATGGGACGCATTTGGTCACTAGTCCAGTTGCAATTTCTTGGTCATGAATTATATGAACAAATTANAGAGCTATATATAGCTGCTATCGATTTAATGTAAAGTTAATCAAAGAAATTTATGCTTCTTGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C00HBa0203P08-g3tq1/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U317724" ref_strand="+" ref_description="SGN-U317724        Tomato 200607 #1 [12 ESTs aligned] arabidopsis/peptide: | Symbol: None | cucumisin-like serine protease (ARA12), Asp48; almost identical to cucumisin-like serine protease (ARA12) GI:3176874 from (Arabidopsis thaliana) | chr5:26889117-26891805 REVERSE | Aliases: K8K14.8, K8K14_8(evalue: 0, score=1112) genbank/nr: gi|18425181|ref|NP_569048.1| subtilisin-like serine protease ARA12 [Arabidopsis thaliana] gi|25289825|pir||JC7519 subtilisin-like serine proteinase (EC 3.4.21.-) - Arabidopsis thaliana gi|3176874|gb|AAC18851.1| cucumisin-like serine protease [Arabidopsis thaliana] gi|9758435|dbj|BAB09021.1| cucumisin-like serine protease [Arabidopsis thaliana] gi|13430746|gb|AAK25995.1| putative subtilisin serine protease ARA12 [Arabidopsis thaliana] gi|23296832|gb|AAN13181.1| putative subtilisin serine protease ARA12 [Arabidopsis thaliana](evalue: 0, score=1112)">
      <seq>gatccactccctcttattaatgcagcagtccaagcgaaaaattaatcaaaaatgtctacatacacactactagttgttgtacttgtgtgcctatgtcacatgtctgtggcaatggtggagaagaaaacatacatcattcacatggctaaatcacaaatgccagcaatatttgatgatcatactcactggtatgacgcgtccctcaaatccgtctctgaatcagcagagatgatctatgtttataaaaacgttgttcatggttttgcagcaaggcttacagctcgacaagctgaatccttagagacccaacctgggattctctctgttttgcctgagctgatataccaactccacactactcggacacctctttttttgggacttgatagaagtgttaatatctttcctgagtccgatgctatgagtgatgtcattgtcggagtactcgatacaggggtttggccggagagaaagagctttgacgatactggatttggacctgtaccagattcgtggaaaggtgagtgtgagtccagcaacaacttcagttctgccatgtgtaacagaaagcttgttggagcgaggtatttttctaggggttatgaaactactcttggaccaattgatgagtccaaggagtctaaatctcctagggatgatgatggacatggaacacacactgcttcgacagcagctggttcagttgttcagggtgctagcctttttggttatgcttcaggaactgctcgtggaatggcctatcgtgccagagttgccatgtacaaagtttgctggcttgggggatgttttaactctgacatattggcagggatggacaaagccattgatgataaagttgatgtgctttcattatcacttggtggaagcacaccagattactacaaagatagcattgcaattggagcttttgctgctatggagaagggtattttggtttcttgctctgctggaaatgctggacctaatcaattcagtttggccaaccaagcaccttggatcaccacagtcggtgctggaacaattgaccgtgattttccagcatatgtaagccttggcaatggtaaaaatttctccggcgtttcactttacgcgggtgattcattacttaataaaatgcttcccttggtgtatgctggtaatgccagcaatgtaaccagtggaaatctctgtatgatgggtaccttaattcctgagaaagttaaaggaaaaattgtgctgtgtgacagagggattagcgctcgagtccaaaagggttttgtggtaaaagaggctggtggagccggcatggttttggctaacaccgcagcaaatggggaggaactagtggctgacgcccatttacttccagcggcggcggtgggtcaaaaagccggtgatgtaatcaagaaatatttattctcagatcctaatccaacggccgaaattctttttggaggaacaaaagtagacatcgaaccgtcaccggttgtcgcagcgttcagttctagaggcccaaattcaatcaccccggagatactcaaaccggatattatcgcgcccggtgtaaacattctggccggttggaccggagccgtcggcccgacggggatggcagaggacgatagacgggtcgagttcaacattatctcaggcacatccatgtcgtgtccacacgtgagcggcttggcggctttgataaaaggagtccacccagaatggagccccgccgccattcgttcggcgctcatgacctccgcttacaccgtctacaagaacggcggagcactagtagatgtcgccaccggaaaaccatctacacctttcgaccacggcgctggacacgtggatcccgtttcggcagtgaacccaggtcttgtttacgacataaacgccgatgattacctcaatttcatgtgtgcattgaaatacactccatcacaaatcaacagcttagcgagaagaaacttcacgtgtgattcaagcaaaacatacagcgtcacagatttgaattacccttcatttgctgtttcattcgttgccgggagtgacggttcaaacacaatcaagtacagccggacattgactaatgttggaccggctggaacatacaaagttacagtttcttccccaaatagttcagtgaaaattatagttgagcctgaaacattgagtttcactcagattaatgagaagaaatcgtatacagtgagttttactgctccatcaaagtcctcagctacggatgtattcggtagaattgagtggtcagatgggaagcatgtggttagtagtccagttgcaatttcttggtcatgaataatatgaagacatagctatagcttctgttaattttatgtataagttgatgtttttctgcttttaagtttcattccagcacaaaagtttgtagctggtctcaagatttttttatggataacatgaaagaatcaaagaaatgtatgccttatacaatatcttgctcactgtacggtattttaagcaattctaattgtgaactgtaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C00HBa0203P08-g3tq1/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C00HBa0203P08.2" temp_strand="+" temp_description="C00HBa0203P08.2  CU457813.5 htgs_phase:3 submitted_to_sgn_as:C04HBa0203P08 sequenced_by:sanger upload_account_name:uk">
        <position start="62282" stop="65401"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62581" g_stop="65098" g_length="2518"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="2518" r_length="2518" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="2521" polyA_stop="2536"/>
      <MATCH_line gen_id="C00HBa0203P08.2" gen_strand="+" ref_id="SGN-U317724" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>2518</cumulative_length_of_scored_exons>
        <coverage percentage="0.993" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C00HBa0203P08.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U317724" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="62581" e_stop="65098"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATCCACTCCCTCTTATTAATGCAGCAGTCCAAGCGAAAAATTAATCAAAAATGTCTACATACACACTACTAGTTGTTGTACTTGTGTGCCTATGTCACATGTCTGTGGCAATGGTGGAGAAGAAAACATACATCATTCACATGGCTAAATCACAAATGCCAGCAATATTTGATGATCATACTCACTGGTATGACGCGTCCCTCAAATCCGTCTCTGAATCAGCAGAGATGATCTATGTTTATAAAAACGTTGTTCATGGTTTTGCAGCAAGGCTTACAGCTCGACAAGCTGAATCCTTAGAGACCCAACCTGGGATTCTCTCTGTTTTGCCTGAGCTGATATACCAACTCCACACTACTCGGACACCTCTTTTTTTGGGACTTGATAGAAGTGTTAATATCTTTCCTGAGTCCGATGCTATGAGTGATGTCATTGTCGGAGTACTCGATACAGGGGTTTGGCCGGAGAGAAAGAGCTTTGACGATACTGGATTTGGACCTGTACCAGATTCGTGGAAAGGTGAGTGTGAGTCCAGCAACAACTTCAGTTCTGCCATGTGTAACAGAAAGCTTGTTGGAGCGAGGTATTTTTCTAGGGGTTATGAAACTACTCTTGGACCAATTGATGAGTCCAAGGAGTCTAAATCTCCTAGGGATGATGATGGACATGGAACACACACTGCTTCGACAGCAGCTGGTTCAGTTGTTCAGGGTGCTAGCCTTTTTGGTTATGCTTCAGGAACTGCTCGTGGAATGGCCTATCGTGCCAGAGTTGCCATGTACAAAGTTTGCTGGCTTGGGGGATGTTTTAACTCTGACATATTGGCAGGGATGGACAAAGCCATTGATGATAAAGTTGATGTGCTTTCATTATCACTTGGTGGAAGCACACCAGATTACTACAAAGATAGCATTGCAATTGGAGCTTTTGCTGCTATGGAGAAGGGTATTTTGGTTTCTTGCTCTGCTGGAAATGCTGGACCTAATCAATTCAGTTTGGCCAACCAAGCACCTTGGATCACCACAGTCGGTGCTGGAACAATTGACCGTGATTTTCCAGCATATGTAAGCCTTGGCAATGGTAAAAATTTCTCCGGCGTTTCACTTTACGCGGGTGATTCATTACTTAATAAAATGCTTCCCTTGGTGTATGCTGGTAATGCCAGCAATGTAACCAGTGGAAATCTCTGTATGATGGGTACCTTAATTCCTGAGAAAGTTAAAGGAAAAATTGTGCTGTGTGACAGAGGGATTAGCGCTCGAGTCCAAAAGGGTTTTGTGGTAAAAGAGGCTGGTGGAGCCGGCATGGTTTTGGCTAACACCGCAGCAAATGGGGAGGAACTAGTGGCTGACGCCCATTTACTTCCAGCGGCGGCGGTGGGTCAAAAAGCCGGTGATGTAATCAAGAAATATTTATTCTCAGATCCTAATCCAACGGCCGAAATTCTTTTTGGAGGAACAAAAGTAGACATCGAACCGTCACCGGTTGTCGCAGCGTTCAGTTCTAGAGGCCCAAATTCAATCACCCCGGAGATACTCAAACCGGATATTATCGCGCCCGGTGTAAACATTCTGGCCGGTTGGACCGGAGCCGTCGGCCCGACGGGGATGGCAGAGGACGATAGACGGGTCGAGTTCAACATTATCTCAGGCACATCCATGTCGTGTCCACACGTGAGCGGCTTGGCGGCTTTGATAAAAGGAGTCCACCCAGAATGGAGCCCCGCCGCCATTCGTTCGGCGCTCATGACCTCCGCTTACACCGTCTACAAGAACGGCGGAGCACTAGTAGATGTCGCCACCGGAAAACCATCTACACCTTTCGACCACGGCGCTGGACACGTGGATCCCGTTTCGGCAGTGAACCCAGGTCTTGTTTACGACATAAACGCCGATGATTACCTCAATTTCATGTGTGCATTGAAATACACTCCATCACAAATCAACAGCTTAGCGAGAAGAAACTTCACGTGTGATTCAAGCAAAACATACAGCGTCACAGATTTGAATTACCCTTCATTTGCTGTTTCATTCGTTGCCGGGAGTGACGGTTCAAACACAATCAAGTACAGCCGGACATTGACTAATGTTGGACCGGCTGGAACATACAAAGTTACAGTTTCTTCCCCAAATAGTTCAGTGAAAATTATAGTTGAGCCTGAAACATTGAGTTTCACTCAGATTAATGAGAAGAAATCGTATACAGTGAGTTTTACTGCTCCATCAAAGTCCTCAGCTACGGATGTATTCGGTAGAATTGAGTGGTCAGATGGGAAGCATGTGGTTAGTAGTCCAGTTGCAATTTCTTGGTCATGAATAATATGAAGACATAGCTATAGCTTCTGTTAATTTTATGTATAAGTTGATGTTTTTCTGCTTTTAAGTTTCATTCCAGCACAAAAGTTTGTAGCTGGTCTCAAGATTTTTTTATGGATAACATGAAAGAATCAAAGAAATGTATGCCTTATACAATATCTTGCTCACTGTACGGTATTTTAAGCAATTCTAATTGTGAACT</genome_strand>
        <mrna_strand>GATCCACTCCCTCTTATTAATGCAGCAGTCCAAGCGAAAAATTAATCAAAAATGTCTACATACACACTACTAGTTGTTGTACTTGTGTGCCTATGTCACATGTCTGTGGCAATGGTGGAGAAGAAAACATACATCATTCACATGGCTAAATCACAAATGCCAGCAATATTTGATGATCATACTCACTGGTATGACGCGTCCCTCAAATCCGTCTCTGAATCAGCAGAGATGATCTATGTTTATAAAAACGTTGTTCATGGTTTTGCAGCAAGGCTTACAGCTCGACAAGCTGAATCCTTAGAGACCCAACCTGGGATTCTCTCTGTTTTGCCTGAGCTGATATACCAACTCCACACTACTCGGACACCTCTTTTTTTGGGACTTGATAGAAGTGTTAATATCTTTCCTGAGTCCGATGCTATGAGTGATGTCATTGTCGGAGTACTCGATACAGGGGTTTGGCCGGAGAGAAAGAGCTTTGACGATACTGGATTTGGACCTGTACCAGATTCGTGGAAAGGTGAGTGTGAGTCCAGCAACAACTTCAGTTCTGCCATGTGTAACAGAAAGCTTGTTGGAGCGAGGTATTTTTCTAGGGGTTATGAAACTACTCTTGGACCAATTGATGAGTCCAAGGAGTCTAAATCTCCTAGGGATGATGATGGACATGGAACACACACTGCTTCGACAGCAGCTGGTTCAGTTGTTCAGGGTGCTAGCCTTTTTGGTTATGCTTCAGGAACTGCTCGTGGAATGGCCTATCGTGCCAGAGTTGCCATGTACAAAGTTTGCTGGCTTGGGGGATGTTTTAACTCTGACATATTGGCAGGGATGGACAAAGCCATTGATGATAAAGTTGATGTGCTTTCATTATCACTTGGTGGAAGCACACCAGATTACTACAAAGATAGCATTGCAATTGGAGCTTTTGCTGCTATGGAGAAGGGTATTTTGGTTTCTTGCTCTGCTGGAAATGCTGGACCTAATCAATTCAGTTTGGCCAACCAAGCACCTTGGATCACCACAGTCGGTGCTGGAACAATTGACCGTGATTTTCCAGCATATGTAAGCCTTGGCAATGGTAAAAATTTCTCCGGCGTTTCACTTTACGCGGGTGATTCATTACTTAATAAAATGCTTCCCTTGGTGTATGCTGGTAATGCCAGCAATGTAACCAGTGGAAATCTCTGTATGATGGGTACCTTAATTCCTGAGAAAGTTAAAGGAAAAATTGTGCTGTGTGACAGAGGGATTAGCGCTCGAGTCCAAAAGGGTTTTGTGGTAAAAGAGGCTGGTGGAGCCGGCATGGTTTTGGCTAACACCGCAGCAAATGGGGAGGAACTAGTGGCTGACGCCCATTTACTTCCAGCGGCGGCGGTGGGTCAAAAAGCCGGTGATGTAATCAAGAAATATTTATTCTCAGATCCTAATCCAACGGCCGAAATTCTTTTTGGAGGAACAAAAGTAGACATCGAACCGTCACCGGTTGTCGCAGCGTTCAGTTCTAGAGGCCCAAATTCAATCACCCCGGAGATACTCAAACCGGATATTATCGCGCCCGGTGTAAACATTCTGGCCGGTTGGACCGGAGCCGTCGGCCCGACGGGGATGGCAGAGGACGATAGACGGGTCGAGTTCAACATTATCTCAGGCACATCCATGTCGTGTCCACACGTGAGCGGCTTGGCGGCTTTGATAAAAGGAGTCCACCCAGAATGGAGCCCCGCCGCCATTCGTTCGGCGCTCATGACCTCCGCTTACACCGTCTACAAGAACGGCGGAGCACTAGTAGATGTCGCCACCGGAAAACCATCTACACCTTTCGACCACGGCGCTGGACACGTGGATCCCGTTTCGGCAGTGAACCCAGGTCTTGTTTACGACATAAACGCCGATGATTACCTCAATTTCATGTGTGCATTGAAATACACTCCATCACAAATCAACAGCTTAGCGAGAAGAAACTTCACGTGTGATTCAAGCAAAACATACAGCGTCACAGATTTGAATTACCCTTCATTTGCTGTTTCATTCGTTGCCGGGAGTGACGGTTCAAACACAATCAAGTACAGCCGGACATTGACTAATGTTGGACCGGCTGGAACATACAAAGTTACAGTTTCTTCCCCAAATAGTTCAGTGAAAATTATAGTTGAGCCTGAAACATTGAGTTTCACTCAGATTAATGAGAAGAAATCGTATACAGTGAGTTTTACTGCTCCATCAAAGTCCTCAGCTACGGATGTATTCGGTAGAATTGAGTGGTCAGATGGGAAGCATGTGGTTAGTAGTCCAGTTGCAATTTCTTGGTCATGAATAATATGAAGACATAGCTATAGCTTCTGTTAATTTTATGTATAAGTTGATGTTTTTCTGCTTTTAAGTTTCATTCCAGCACAAAAGTTTGTAGCTGGTCTCAAGATTTTTTTATGGATAACATGAAAGAATCAAAGAAATGTATGCCTTATACAATATCTTGCTCACTGTACGGTATTTTAAGCAATTCTAATTGTGAACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C00HBa0203P08-g3tq1/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U341584" ref_strand="+" ref_description="SGN-U341584        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: | Symbol: None | expressed protein | chr2:9839203-9841819 FORWARD | Aliases: None(evalue: 9e-06, score=40.4)">
      <seq>tttttttttacgtaatctttcttcaaattataatatctgcaatccaaccaaataattaaaggaaaaatcaccatgatatagagatcatgtctgccggtttaaagaaaacatgataagaaagaagagaaatttctcttactctttggtgatctctgaatatgaaacaagactttccgtggaccatcacaattctgaagagctggtaaaatcatgcaaactaagccaccatgtattctggtactcctctgggataacacttctccacaatacttactagaagcaaagtattaatttagccttttcagggcatcaatctgcaaagtggctcgaaagcaaaattgaact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C00HBa0203P08-g3tq1/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C00HBa0203P08.2" temp_strand="+" temp_description="C00HBa0203P08.2  CU457813.5 htgs_phase:3 submitted_to_sgn_as:C04HBa0203P08 sequenced_by:sanger upload_account_name:uk">
        <position start="67354" stop="68295"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="67651" g_stop="67995" g_length="345"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="345" r_length="345" r_score="0.980"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C00HBa0203P08.2" gen_strand="+" ref_id="SGN-U341584" ref_strand="+">
        <total_alignment_score>0.980</total_alignment_score>
        <cumulative_length_of_scored_exons>345</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C00HBa0203P08.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U341584" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="67651" e_stop="67995"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCATTCTTTACGTAATCTTTCTTCAAATTATAATATCTGCAATCCAACCAAATAATTAAAGGAAAAATCACCATGATATAGAGATCATGTCTGCCGGTTTAAAGAAAACATGATAAGAAAGAAGAGAAATTTCTCTTACTCTTTGGTGATCTCTGAATATGAAACAAGACTTTCCGTGGACCATCACAATTCTGAAGAGCTGTTAAAATCATGCAAACTAAGCCACCATGTATTCTGTTACTCCTCTGGTATAACACTTCTCCACAATACTTACTAGAAGCAAAGTATTAATTTAGCCTTTTCAGGGCATCAATCTGCAAAGTGTCTCGAAAGCAAAATTGAACT</genome_strand>
        <mrna_strand>TTTTTTTTTACGTAATCTTTCTTCAAATTATAATATCTGCAATCCAACCAAATAATTAAAGGAAAAATCACCATGATATAGAGATCATGTCTGCCGGTTTAAAGAAAACATGATAAGAAAGAAGAGAAATTTCTCTTACTCTTTGGTGATCTCTGAATATGAAACAAGACTTTCCGTGGACCATCACAATTCTGAAGAGCTGGTAAAATCATGCAAACTAAGCCACCATGTATTCTGGTACTCCTCTGGGATAACACTTCTCCACAATACTTACTAGAAGCAAAGTATTAATTTAGCCTTTTCAGGGCATCAATCTGCAAAGTGGCTCGAAAGCAAAATTGAACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C00HBa0203P08-g3tq1/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U332833" ref_strand="+" ref_description="SGN-U332833        Tomato 200607 #1 [2 ESTs aligned] arabidopsis/peptide: | Symbol: None | expressed protein | chr2:9839203-9841819 FORWARD | Aliases: None(evalue: 9e-111, score=397) genbank/nr: Protein(evalue: 2e-117, score=425)">
      <seq>agacacgttccactattcgccgggatgatctagtacttttgagatccggtgaaatacgtcttgtacattttcttaagaatgggggtgatcgtcgagagcaatgtttgggagccaaatccagcactgtgtttattcttcttcatatcatgttgcttgtcaatctactatttgccaaacagcaccagaagttccgccattttcgatcacgcaccttcgtcttccttcattcgtttccagagaagtttccttttactctattcgctttcttcagtaatggaaggcttgttggcagtatttggagagtacgacttggcgttccatggcattagtagggagcagatggtcatctctctatgtattggatacacaactgctctctttgtcggtacctttttgggcatgctctcggatttgattggccagagaaaagtcagcttgttattttgcttgctgcatctttttgttgccgtatggcggagggtgactggacatccaagtatttggctcgctagcatctgtctctctcttacctctacaatatttttcttcaacttccagacatggatggttgttgagcatgataagcttgagcagaagcaggattcactgaatgacatgttttggttagtgacttttgttgaatctgcatctttcattggaagccaagtggttggtaactggttaattggcggtcgtgaaaagacaactttgcttgctccgtccagtgcagtggtaataatggctcttagtgctctggcttatgtcagccgaggatggaacgaatatccaaaatcaattattcttaaagaatatcagactagatttcatacatacataatcagtgataaaagggtttggcttttgtcatggacccaagctaccatgcacttctcaattgcagttttttggattacttgggctccaaccattgtggcagatgggagatgggttttgctaggattactatacccctgtgtacttggtgcgaaaatgcttgcaagcactgcattttcctggatctctagtggccctttatcactccgaacagacgagtgcttattatatgcctgcattattatgggcttagccacttccattgcagcttatgattatcaggatgttgaaattctcttgatgctattctgcatatttcatgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C00HBa0203P08-g3tq1/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C00HBa0203P08.2" temp_strand="-" temp_description="C00HBa0203P08.2  CU457813.5 htgs_phase:3 submitted_to_sgn_as:C04HBa0203P08 sequenced_by:sanger upload_account_name:uk">
        <position start="73799" stop="68672"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="73496" g_stop="73292" g_length="205"/>
          <reference_exon_boundary r_type="cDNA" r_start="67" r_stop="271" r_length="205" r_score="0.995"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="73291" i_stop="72458" i_length="834">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.988" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="72457" g_stop="72313" g_length="145"/>
          <reference_exon_boundary r_type="cDNA" r_start="272" r_stop="416" r_length="145" r_score="0.966"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="72312" i_stop="71847" i_length="466">
            <donor d_prob="0.955" d_score="0.96"/>
            <acceptor a_prob="0.869" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="71846" g_stop="71678" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="417" r_stop="585" r_length="169" r_score="0.970"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="71677" i_stop="71131" i_length="547">
            <donor d_prob="0.996" d_score="0.98"/>
            <acceptor a_prob="0.982" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="71130" g_stop="70872" g_length="259"/>
          <reference_exon_boundary r_type="cDNA" r_start="586" r_stop="844" r_length="259" r_score="0.969"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="70871" i_stop="69992" i_length="880">
            <donor d_prob="0.911" d_score="0.98"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="69991" g_stop="69903" g_length="89"/>
          <reference_exon_boundary r_type="cDNA" r_start="845" r_stop="933" r_length="89" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="69902" i_stop="69275" i_length="628">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="69274" g_stop="69092" g_length="183"/>
          <reference_exon_boundary r_type="cDNA" r_start="934" r_stop="1116" r_length="183" r_score="0.934"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="69091" i_stop="69013" i_length="79">
            <donor d_prob="0.987" d_score="0.90"/>
            <acceptor a_prob="0.982" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="69012" g_stop="68972" g_length="41"/>
          <reference_exon_boundary r_type="cDNA" r_start="1117" r_stop="1157" r_length="41" r_score="0.976"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C00HBa0203P08.2" gen_strand="-" ref_id="SGN-U332833" ref_strand="+">
        <total_alignment_score>0.970</total_alignment_score>
        <cumulative_length_of_scored_exons>1091</cumulative_length_of_scored_exons>
        <coverage percentage="0.943" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C00HBa0203P08.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U332833" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="73496" e_stop="73292"/>
          <exon e_start="72457" e_stop="72313"/>
          <exon e_start="71846" e_stop="71678"/>
          <exon e_start="71130" e_stop="70872"/>
          <exon e_start="69991" e_stop="69903"/>
          <exon e_start="69274" e_stop="69092"/>
          <exon e_start="69012" e_stop="68972"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTTTCTTAAGAATGGGGGTGATCGTCGAGAGCAATGTTTGGGAGCCAAATCCAGCACTGTGTTTATTCTTCTTCATATCATGTTGCTTGTCAATCTACTATTTGCCAAGCAGCACCAGAAGTTCCGCCATTTTCGATCACGCACCTTCGTCTTCCTTCATTCGTTTCCAGAGAAGTTTCCTTTTACTCTATTCGCTTTCTTCAGGTGACGTTATTTTCCGAGTTGTTTTTTTCTTCCCACTGAATGTAGTATTAGGAAATGTCGCGTTCTAATTAACTCCTAGAGTCTACTTGCTGCTAAAATTGGTGCGAGGTAGTGAACTTTACGTGTTTCCCTGTTTATTAACTGCTGGATTTCCTCTGTTACAAATGTTTGATATTTACCCTCTATTTTGCCAAAAGAGAAAAATGAAACTTCTAGCAGGTTCTGGATTTCATAATTTTAACTTAAAGAAATGAATTAAACTAGTCTGACTTAGTTCTGAAAATGGTCAAGTTGACGTCTCAAACTAATTGGATAGATGGACTATCTCTTAATTTGTATGTTGCTACATTGAGCATTTTATCAAGTTAGATATTTTTTTCATTTGTGGAACACTCAGGTTCACAAAAGTGGATTATCCTGTTGTTATAGTAGAGTAATAAACATCTATACAAATTTGGATCAATCAAATTCAAAAGTTTATTCAAGACTCAATGAAGTTATTCTAACATATGATATTAAAATGTTGATACGGGAACTTTACATTGAATGTGGAGTGTGAATTGATATACTGATACAAGTTGCTCCCGTATAATCTGTTTATTAGCATATTATGATAAGGCTGAGCTGACACCACAAAGTTGTCAATTATTATTTTAACTTGATAGAGATATCGTAGTTACTGATCATAGAACACATGTTAAGGTGTACGCGAAATCACATATTCCATAAAAAAAGTCACGCTTCCCTTTTTATTACATCCTCGATATATAAGTTTGTCCTTTTTATGATTGCTTGGATTCAAAATCGTTATTTATTTAATTTAACTTTTTACAGTAATGGAAGGCTTGTTGGCAGTATTTGGAGAGTACGACTTAGCATTCCATGGCATTAGTAGGGAGCAGATGGTCATCTCTCTATGTGTTGGATACGCAACTGCTCTCTTTGTCGGTACCTTTTTGGGAATGCTCTCGGATTTGATGTAAGGGTACCTGCCTAGTTTTCTGTGTTTACCATGTTCCATCTCTATTTGCATAACCATTATGGTATACTGCAAGTTGCCATTTTCATTCTTTTGGAAATCTATATATCATAAATTCAAAATCTTAGACTACGATTATTTGGTTCAACATCATAATGAAATAGAGCTTCCATTTTGGGAGATATTAAGTATCAATCTCATCTACGTTCCTTTGATGCATTCTTTTTAGACTAAGAGATCATTTTTCTAATAAACTGTCCAACAAAGCTTGAACTTGAAGCTATGTGTTTGACCAGTATATGTTCCAAAGTACTAAACTGTATTGGTCCATGATGATTATCATTATTGTTTTCAATCGTTTATTGTTCTCAAAATTGTGATGGAGCACCATAAGATAAATGATTTTTTTGATTAGTCAAGAATACCATCTGTCAAACTTATTATTATGTTGTCTCTCTTCCTGCAGTGGCCAGAGAAAAGTCAGCTTGTTATTTTGCTTGCTGCATCTTTTTGTTGCCGTATGGAGGAGGGTTACTGGACATCCAACTATTTGGCTCGCTAGCATCTGTCTGTCTCTTACCTCTACAATATTTTTCTTCAACTTCGAGACATGGATGGTTGTTGAGCATGATAAGGTTTGTCTTCGGAATCTCTTTTTGTTATTATTGTATGATTTGCTATTTCATGTGGGAAGTACTATTATGAAGACTTGTTAACTCAAAATGCTTATCCACTTTTTAAAATGAATAAATCTGGGAAATCTTTTTTATACCAAAAAAAGATGATGAATATATGTAGCAAATGCAAAGGGGTTAGGATGGGGGAGTATGGATGTATACTCTATAGTCTTTCAGAGTTTCTTTCTTTGTCAACTACATAAGTTTATTTTGGACCTATTTTGCCGTAGCAGCATATGTGATCACATTTGAAAAAGATGATGAATAAATGTAGCAAATGCAAAGGGGTTAGGGTGGGGGAGTGTGGATCTATAGTCTTTTAGAGTTTCTTTCTCTGCCAACTACATCAGCCTATTTTGGACCTATTCTTCCATAGCAGCATATGTGATCACATTTGAACATTTTTCTCGGTCGGGGAGTCTTCACAGTCAGATTTCAGATCTCTGTATGAATTTGAATCGTTGATAGTAGAGTAAGATGAGTTATCCTTATAATCATTTTGCAGCTTGAGCAGAGGCAGGATTCAGTGAATGACATGTTTTGGTTAATGACTTTTGTTGAATCTGCATCTTTCATTGGAAGCCAAGTGGTTGGTAACTGGTTAATTGGTGGTCATGAAAAGACAACTTTGCTTGCTCCGTCCAGTGCAGTGGTAATAATGGCTCTTAGTGCTCTGGCTTATGTCAGCCGAGGATGGAAGGAAGATCCAAAATCAATTATTCTTAAAGAATATCAGACTAAATTTCATACATACATAATCAGTGGTATGAGTCCTCTATTATTATTCTTATGTTCCTTTTCCTGAAGATATAACTTTCTGTTGTCACAACTTAACTGAGGGACACATTTCCATAGCTAACTGTGACACTAAAAGAAATATTTGATCAATTCTGTGGATCTCCCGATAAAAAGATTCTATAAATTAGTAATATCAGATAAGTTTTACCACTGAAATCCACAATTCGAATATTGGAATTCTTGGATAGTCACAAGAAATCTGGCTTAACTTATTTCCTTACTCTTTTGCGCTTCCCTTTCCAGTAAAAGGAGGCAATGTGCCACATTTGAGTTAAAAAGAAGAAAGGGGCGGTGATAGAAAGAGAGGGAAAGTAAGGAAGGAGGAATTCAAAAGGCTGACCACAATCTCATAGGCATTGTCAATCTGATCTTTCGCTCCGTCTCCAATTGCTCCCTTATTCCCTCGACCAAAGTCCAAACTATGTGTAGCTACCTTATTTTTCTTACTGTGATCTTATTTTGGGTGGTACTTGATCAACTTAGCTCGAAAACAGTAGTCAATACTTTAGAAGAGCATGAAAGCATTACAGAGCCATAAAGCAGAGAGAAATTAACCCATTTATTGTTAATAAATACTACCAGAATGGTAGAACAAACAGTACGAGTATAGTAATCTTCTAATACAAAATGAGGCTGTACCTAATTTGGGTTTATATATTAGTTGAAATGTAATGCTTAAGATAGTTAAAATGGTCCAATTTCAGAAATTAGAAGTTCTGCAACATCTTAATATGATATGAGATGGAGAACATGCATCTTTAAGAAATGCTGTTTTTGATGACTAATTGCATAATTGGGAGTGGTTGGATCGACTTTCTAATCTTTTTCCAATTGTATTCTTGGCAGATAAAAGGGTTTGGCTTTTGTCATGGACCCAAGCTACCATGCACTTCTCAATTGCAGTTTTTTGGATTACTTGGGCTCCAACCATTGTGGTATGATTCTGATAAGATTTCTCGAAAGGATACTGTTTCAGCGTTTCTGACTCTCCAATTCCTATTATTGTTTTCTCATGGAAATGTATTCTAATAGGTGTGCTAAATCTTTTAATCTACTTACCTTAATTTTGAAGAGAGTAGTTGAAGTTATCTATATGAAAACACACCTCCTTGATTAGATTTAAAATGTTTAAAGTTAATTATTCTTTTGTACTTTCGGTCTCAAAATTGGAAATGGAAGTGTATCAAGGAAAAATGGATAGAGGAAGTATTTGAGTTACTACTGTGCGAGGCCTTCTTTGGAAAGATTGATGAGATCCATTCTAATACCGAGAGTAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTGGCTGTGACTGTTTGTGTAAGATAAATCAGAATGTTGACTATACAAGTGCAATAAACCATTTTACTATTATTGAAATCTATGAAGTAATCTTTTTGTGGCCAATATCTATGTCTCTCAAACTTTGTGAATACTGATTTACCAAGATGATTGCTTAACATTACATTTCTTTCCCTTCTGAAATCCTATCTCACCATATTTGTTCCTGGTCCAAAAAGATTGATATATTTTCTCCTTAAAGTTTGTTTGGATTTTTAGGCAGATGGGAGAGGGGTTTTGCTAGGTTTAGTATACCCCTGTGTACTTGGTGCGAAAATGCTTGGAAGCACTGCATTTTCCTGGTTCTCTAGTGGCCCTTTATCACTCCGAACAGAGGAGTGCTTAGTATATGCCTGTATTATTATGGGCTTTGTCACTTCCATTGTAGCTTTTGATTATCAGGTATTTATGAGTTTTCTTATCTTCAAGCTGTTCAAATATCAAGTAATGTCATCAAACTTAATTTGTGATATTGTTGCAGGATGTTGAAATTCTTTTGATGCTATTCTGCATATTTCATGC</genome_strand>
        <mrna_strand>ATTTTCTTAAGAATGGGGGTGATCGTCGAGAGCAATGTTTGGGAGCCAAATCCAGCACTGTGTTTATTCTTCTTCATATCATGTTGCTTGTCAATCTACTATTTGCCAAACAGCACCAGAAGTTCCGCCATTTTCGATCACGCACCTTCGTCTTCCTTCATTCGTTTCCAGAGAAGTTTCCTTTTACTCTATTCGCTTTCTTCAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATGGAAGGCTTGTTGGCAGTATTTGGAGAGTACGACTTGGCGTTCCATGGCATTAGTAGGGAGCAGATGGTCATCTCTCTATGTATTGGATACACAACTGCTCTCTTTGTCGGTACCTTTTTGGGCATGCTCTCGGATTTGAT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCCAGAGAAAAGTCAGCTTGTTATTTTGCTTGCTGCATCTTTTTGTTGCCGTATGGCGGAGGGTGACTGGACATCCAAGTATTTGGCTCGCTAGCATCTGTCTCTCTCTTACCTCTACAATATTTTTCTTCAACTTCCAGACATGGATGGTTGTTGAGCATGATAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGAGCAGAAGCAGGATTCACTGAATGACATGTTTTGGTTAGTGACTTTTGTTGAATCTGCATCTTTCATTGGAAGCCAAGTGGTTGGTAACTGGTTAATTGGCGGTCGTGAAAAGACAACTTTGCTTGCTCCGTCCAGTGCAGTGGTAATAATGGCTCTTAGTGCTCTGGCTTATGTCAGCCGAGGATGGAACGAATATCCAAAATCAATTATTCTTAAAGAATATCAGACTAGATTTCATACATACATAATCAGTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAAAAGGGTTTGGCTTTTGTCATGGACCCAAGCTACCATGCACTTCTCAATTGCAGTTTTTTGGATTACTTGGGCTCCAACCATTGTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGATGGGAGATGGGTTTTGCTAGGATTACTATACCCCTGTGTACTTGGTGCGAAAATGCTTGCAAGCACTGCATTTTCCTGGATCTCTAGTGGCCCTTTATCACTCCGAACAGACGAGTGCTTATTATATGCCTGCATTATTATGGGCTTAGCCACTTCCATTGCAGCTTATGATTATCAG...............................................................................GATGTTGAAATTCTCTTGATGCTATTCTGCATATTTCATGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C00HBa0203P08-g3tq1/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U342765" ref_strand="+" ref_description="SGN-U342765        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: | Symbol: None | expressed protein | chr2:9836530-9837490 REVERSE | Aliases: F21P24.15(evalue: 9e-15, score=77.4) genbank/nr: hypothetical(evalue: 1e-13, score=79.7)">
      <seq>tcatcttcgtatgagttcatatttcataatgacaacccaataatggcaactctcaatcatgtgttccactgtgtagtctcctttaaatgttctgtaatttggctcatgtagcatgtgaattgtttagtcactcttcttacatagatactggctatgtggttcagtactcctatctttctccttgtactttgaaaatctgaatttaggcaattcgattgttttttatgtcttattagattgtcttttgtctttcttttccagccttctacgatatttctgtgatgttgtataacttctgccaaaaaaaattttcttaggctttcaataggagatagcctaagtaaagagtcgcattcaagtctgaacaataatctttatggctctgcttatcagtgtctacacagattttcttaccgggtgaactatttttatgtcttctttcagcctctgataattcattagtgtctttagagttcatcttgattgatgtttgttttgatccttcactaacttgtatttattgttgcggatgatggcagtgcaaggtgtgcat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C00HBa0203P08-g3tq1/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C00HBa0203P08.2" temp_strand="+" temp_description="C00HBa0203P08.2  CU457813.5 htgs_phase:3 submitted_to_sgn_as:C04HBa0203P08 sequenced_by:sanger upload_account_name:uk">
        <position start="75111" stop="76263"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="75411" g_stop="75963" g_length="553"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="553" r_length="553" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C00HBa0203P08.2" gen_strand="+" ref_id="SGN-U342765" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>553</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C00HBa0203P08.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U342765" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="75411" e_stop="75963"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCATCTTCGTATGAGTTCATATTTCATAATGACAACCCAATAATGGCAACTCTCAATCATGTGTTCCACTGTGTAGTCTCCTTTAAATGTTCTGTAATTTGGCTCATGTAGCATGTGAATTGTTTAGTCACTCTTCTTACATAGATACTGGCTATGTGGTTCAGTACTCCTATCTTTCTCCTTGTACTTTGAAAATCTGAATTTAGGCAATTCGATTGTTTTTTATGTCTTATTAGATTGTCTTTTGTCTTTCTTTTCCAGCCTTCTACGATATTTCTGTGATGTTGTATAACTTCTGCCAAAAAAAATTTTCTTAGGCTTTCAATAGGAGATAGCCTAAGTAAAGAGTCGCATTCAAGTCTGAACAATAATCTTTATGGCTCTGCTTATCAGTGTCTACACAGATTTTCTTACCGGGTGAACTATTTTTATGTCTTCTTTCAGCCTCTGATAATTCATTAGTGTCTTTAGAGTTCATCTTGATTGATGTTTGTTTTGATCCTTCACTAACTTGTATTTATTGTTGCGGATGATGGCAGTGCAAGGTGTGCAT</genome_strand>
        <mrna_strand>TCATCTTCGTATGAGTTCATATTTCATAATGACAACCCAATAATGGCAACTCTCAATCATGTGTTCCACTGTGTAGTCTCCTTTAAATGTTCTGTAATTTGGCTCATGTAGCATGTGAATTGTTTAGTCACTCTTCTTACATAGATACTGGCTATGTGGTTCAGTACTCCTATCTTTCTCCTTGTACTTTGAAAATCTGAATTTAGGCAATTCGATTGTTTTTTATGTCTTATTAGATTGTCTTTTGTCTTTCTTTTCCAGCCTTCTACGATATTTCTGTGATGTTGTATAACTTCTGCCAAAAAAAATTTTCTTAGGCTTTCAATAGGAGATAGCCTAAGTAAAGAGTCGCATTCAAGTCTGAACAATAATCTTTATGGCTCTGCTTATCAGTGTCTACACAGATTTTCTTACCGGGTGAACTATTTTTATGTCTTCTTTCAGCCTCTGATAATTCATTAGTGTCTTTAGAGTTCATCTTGATTGATGTTTGTTTTGATCCTTCACTAACTTGTATTTATTGTTGCGGATGATGGCAGTGCAAGGTGTGCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C00HBa0203P08-g3tq1/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U313852" ref_strand="+" ref_description="SGN-U313852        Tomato 200607 #1 [39 ESTs aligned] arabidopsis/peptide: AT5G67380.1 | Symbol: None | casein kinase II alpha chain 1, identical to casein kinase II, alpha chain 1 (CK II) (Arabidopsis thaliana) SWISS-PROT:Q08467; contains protein kinase domain, Pfam:PF00069 | chr5:26898192-26900611 REVERSE | Aliases: K8K14.10, K8K14_10 (evalue: 7e-176, score=613) genbank/nr: gi|44804336|emb|CAD26882.1| protein kinase CK2 alpha subunit [Nicotiana tabacum] (evalue: 2e-179, score=631)">
      <seq>gtgaaaagggtcccaatagcagcatacaagagagagcaaaaagctttcccaatctatggctttttcctaaaaatggtgtgtgagtaaagtagtgttattgctctggcggttgcatcaaacagaagcggggcccaattccttcgttgcatctacccagcctgcgtcttctttgttgtcccttttccgaaatccgatacctttatcaataactcttcagtctctgatttccggataaaccatgtccaaagctcgagtatacaccgatatcaatgtgcttcgtcctagggaatattgggattacgaatcgctaactgttcaatggggtgatcaggatgactatgaggttgttcgaaaagttggaagaggaaaatacagtgaagtttttgaaggtataaatgttaacagcagggagaagtgcataatcaagatcctgaaacctgttaagaagaaaaagatcaaaagagagataaagatattgcaaaatctctgtggtggaccaaatattgtcaaactccttgatatcgtcagagatcagcattcaaaaactccaagcttgatttttgagtacgtgaacagcacagatttcaaggttttgtacccaacgctaacagactatgacatacggtactacatatatgagcttctcaaggcactagattattgccattcacagggaataatgcacagggatgtcaaacctcataacgttatgatagaccatgaactgcggaagcttcgcttgatagattggggtcttgccgaattttaccacccagggaaggaatataatgttcgtgtggcttcaagatacttcaagggccctgaacttctagttgacttgcaagactatgactattctttggacatgtggagccttggctgcatgtttgcaggaatgattttccgcaaggaacctttcttttatggccatgataatcaggatcagctcgtcaaaattgcaaaggtacttgggacagatgagttgaatgcgtacttgcacaagtatcaactagagcttgatcctcagctagaggctatggttgggagacacagtaggaagccgtggtccaaatttattaatgcagacaatcagcatctagtgtcaccggaggctatagattatcttgacaagcttctccgttacgatcatcagactagacttacggcaaaagaagcaatggcccatccatatttcgggcaagtgagggctgctgaaactagcagaatgaggacacagtagctttcttgtcttgctgttaatgggaagaaaaaaaactgtgtaatgtaccttgtgtatccatttaagtgacattcgtgagaactatgtggatttgaacttgagcagacatctgaattcaggaattacagatcttcatcattgaacatttcaagagaaatagtgttttttagatttcctgatcgtgaccttgattgcaaatggaagtgacttgctgggcgtcaaaagtcaccccacccccccttccccaaagatactatctccctagatgtgaacaaaagcagatttttgaaaattagttcactttgtatattagtgcactggatttttctgcattcaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C00HBa0203P08-g3tq1/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C00HBa0203P08.2" temp_strand="-" temp_description="C00HBa0203P08.2  CU457813.5 htgs_phase:3 submitted_to_sgn_as:C04HBa0203P08 sequenced_by:sanger upload_account_name:uk">
        <position start="83608" stop="76209"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="83308" g_stop="82985" g_length="324"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="324" r_length="324" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82984" i_stop="81809" i_length="1176">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81808" g_stop="81679" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="325" r_stop="454" r_length="130" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="81678" i_stop="81120" i_length="559">
            <donor d_prob="0.975" d_score="1.00"/>
            <acceptor a_prob="0.273" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="81119" g_stop="80925" g_length="195"/>
          <reference_exon_boundary r_type="cDNA" r_start="455" r_stop="649" r_length="195" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="80924" i_stop="79445" i_length="1480">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="79444" g_stop="79287" g_length="158"/>
          <reference_exon_boundary r_type="cDNA" r_start="650" r_stop="807" r_length="158" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="79286" i_stop="78441" i_length="846">
            <donor d_prob="0.568" d_score="1.00"/>
            <acceptor a_prob="0.911" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="78440" g_stop="78350" g_length="91"/>
          <reference_exon_boundary r_type="cDNA" r_start="808" r_stop="898" r_length="91" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="78349" i_stop="78164" i_length="186">
            <donor d_prob="0.930" d_score="1.00"/>
            <acceptor a_prob="0.941" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="78163" g_stop="78098" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="899" r_stop="964" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="78097" i_stop="77908" i_length="190">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="77907" g_stop="77825" g_length="83"/>
          <reference_exon_boundary r_type="cDNA" r_start="965" r_stop="1047" r_length="83" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="77824" i_stop="77637" i_length="188">
            <donor d_prob="0.900" d_score="1.00"/>
            <acceptor a_prob="0.917" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="77636" g_stop="77573" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="1048" r_stop="1111" r_length="64" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="77572" i_stop="77438" i_length="135">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="77437" g_stop="77369" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="1112" r_stop="1180" r_length="69" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="77368" i_stop="76905" i_length="464">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.967" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="76904" g_stop="76509" g_length="396"/>
          <reference_exon_boundary r_type="cDNA" r_start="1181" r_stop="1576" r_length="396" r_score="1.000"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="76508" i_stop="76456" i_length="53">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.625" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="76455" g_stop="76447" g_length="9"/>
          <reference_exon_boundary r_type="cDNA" r_start="1577" r_stop="1585" r_length="9" r_score="0.667"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C00HBa0203P08.2" gen_strand="-" ref_id="SGN-U313852" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>1585</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C00HBa0203P08.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U313852" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="83308" e_stop="82985"/>
          <exon e_start="81808" e_stop="81679"/>
          <exon e_start="81119" e_stop="80925"/>
          <exon e_start="79444" e_stop="79287"/>
          <exon e_start="78440" e_stop="78350"/>
          <exon e_start="78163" e_stop="78098"/>
          <exon e_start="77907" e_stop="77825"/>
          <exon e_start="77636" e_stop="77573"/>
          <exon e_start="77437" e_stop="77369"/>
          <exon e_start="76904" e_stop="76509"/>
          <exon e_start="76455" e_stop="76447"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGAAAAGGGTCCCAATAGCAGCATACAAGAGAGAGCAAAAAGCTTTCCCAATCTATGGCTTTTTCCTAAAAATGGTGTGTGAGTAAAGTAGTGTTATTGCTCTGGCGGTTGCATCAAACAGAAGCGGGGCCCAATTCCTTCGTTGCATCTACCCAGCCTGCGTCTTCTTTGTTGTCCCTTTTCCGAAATCCGATACCTTTATCAATAACTCTTCAGTCTCTGATTTCCGGATAAACCATGTCCAAAGCTCGAGTATACACCGATATCAATGTGCTTCGTCCTAGGGAATATTGGGATTACGAATCGCTAACTGTTCAATGGGGGTAAATATTTTCCCTTATTTAACCCTAATCGCTTTTGATTTTGTTTTTAGTTTTGGGGGTTTGTATACTGGATAATAGATTGAAATTCTTGAATTAGATGCTGTTTATTACCTTTTTTTAAAAAGATTGTTTGGTAAAATAATAACATCCACTTCTAGCATCCAAGAAAATAGTTTTTGCTTATGTTTCCTTGTTTTTTCCGTCTGAAGTAAAAAGTGGGTGTTGTAACATCCTCTTACAGCATCCAAGAACATAATTCTTGGGTATGTTTCCTTGTTTTTTTCGTCTGAAAGAAAAGTGGGTGTGTTGTAACATCCTCTTACAGCATCCAAGAACATAATTCTTGGTTATGTTTCCTTTTTTAAAGATAAGTGGAGGTTACATAGCATTGTAACATCCACTCCAGGGGTGGGTGAAACCTGAAAACAAATGTTGGGTTTCTTATTCCTATTTTTTGTCTAATAGATAATTGTGTGATCAGTGTTAGATGCTATTTTGGCGAATTCCTGCTATCTTGAATGGAATGACTTTCACATTGGAAAATACCTATTGGGTTAATGCAAAACTCCTGTCTAGTCTTGTTGAACTGAGTCTGTATTTTGTGGCTCCAGATTAGGTTGGGCTTCAAGTCTTTATATGTTTGTTACTTCTATATTAGCTTCCACATGATACAATGGAAGCTAAATAACAAATATAATATACCAATTAGTTGAGTTATATACCAATTTGTTGAGTTTAAGGATTGGTCCTGCTGGTGCACATTTGGACTGAAGTAAATGTTTGTGTAAGTCTTGTAATAAGAGTGAGATTTACAACCCGTTGTGTTAAAAGTTGAATTATTGAATACTTGAATGGAACAGCCCCGAAGTGGAGTGGATAATTATAGAGGCTTCATTTAGTTGACACCAGTTAGTTTATTTTTGTTATTGTATAGTTCTGCTGCATTTATCAAGATGAGAGCATTTTGTGTAACAAGAACTATATAAATGTCTTGCTAAAGTGGGAGAATATAGTTTGTTAATCTTGGTTCTAGAGTACCTTGACCCTTGGCTCAACGATTAGTTTTATCTTACACAAGTATTGGTTTCAGATATGATTCTATTTGACTTACTCAACTTTAATGCACCAGCTACATTGTATTATCCTCACTAGTGCATGTCATATTTATTATTGTAGTGATCAGGATGACTATGAGGTTGTTCGAAAAGTTGGAAGAGGAAAATACAGTGAAGTTTTTGAAGGTATAAATGTTAACAGCAGGGAGAAGTGCATAATCAAGATCCTGAAACCTGTTAAGAAGAAAAAGGTATGACGTTTTTTGGCTGAATTAAGATTTCATTTTTCTGCTTCAAAAGGAAAAAAAATGAAGAAGTTTGCAGGAAGAGTTCTTCTGTAATGCAATACTTATTTTTTGTCTGACTTAATATCTATGGATAATCTTCAACATTAATGGAAGAATCTGTATCTAACTCATATAAAGGGGCTTAGTATCTATTGAGAATCATCAACATCGACAGGCTTAATGGAAAAATCTGTATTTAACTCATGAAAAAGACTACTCTCAATTATCTATCCATGTGGTTGATAGGGTGTCAAAGAAATAAGTGAAGTTTCTTTTTTGGAACTTTGGAAAAAATTCAGTTATGTTGTACGAAATGCATAATGCCTAGGTTCATCTCTTGATGACATTTTTTGATCGTTTTGGTAGTGTTATGCATCCACTGTTCATACACCTTTTGTCCTCCTATCCTTTCTTTAACTTAATTTTTAAATTAACACTGTTTTAGTTTGTAATATTGTGCTTTATACGGAAAAAAAGAAAAGAATATACATGCTTTTGACTTGACATTAGCGGTATCGTGTAGATCAAAAGAGAGATAAAGATATTGCAAAATCTCTGTGGTGGACCAAATATTGTCAAACTCCTTGATATCGTCAGAGATCAGCATTCAAAAACTCCAAGCTTGATTTTTGAGTACGTGAACAGCACAGATTTCAAGGTTTTGTACCCAACGCTAACAGACTATGACATACGGTACTACATATATGAGCTTCTCAAGGTAAGATGATAAACACATCAGATGGCAGTCAATATGGCTTTTATGTATTCATGCTCCCTCTCCCCTGATTCTTTTTTTTTTTTTTAAGGAAGGTAACAGTTATATACTTCCTGTCCTCTTGGTCCTCCTTTTCTGTATCTTCTTTCTTCTCTCAGAACCAAGAATAGAGTTGTACTGATGTCTTAACTTACTATCTGGTCAAAACTTTGTTTGTCTCCAACATTTCCTTCTATTGCAGCTTTTCAAGGTTTGTATGAGTATGAGAATTTTGGGAGTCCCCAGTTTTCTTATGCTCAGCAACTATTTCTGAATTGAGTGGATATATTCTCATATACTATGATCAAATTATGAGATCAAACTATCAAAGTTATAACTCCTAGGCTCATCTCAAGTGGAAATTTTGGAATCCAAGATTCTGGTGCCATAAAACTGCACTAATTTGGATTCATCTTATATCTATATTTAGATAATTGGGAGTCTGTCGAATGTGTCTCGTGATCTTGGGTTAGTGGGAATGACTAAGACTGTAAACTCATATTTGTTCACCTTATCCTGCCTGCCAATACATGGATTTCAAATCCATCATCAAAAATGTAGATTTTTCTTATTGATATTGTCAGCTCATTCACTGTCTTGGTCATTCCAATTGATTACCTTTCCTCTGCAATTCGGTCTAAGTATAGCTTCTGAATGTGTTTTTTACAAGGTAAATGACCTCATAGTGAGGTGCTTACCATGTCTCTTGTTATCAGATGATATGAATTAGATTCACTGCATGCCTATTGGAAGTTGATTTTATATCTAGATTAATGGCTATGCTCGTTGTTACTCTTAACAATGTGACATTTTTTTTCTGACTTTGGATTTCTTAAGTAACTCTCTTGTATTCTTCTGATCTTATAATTGGTTAAGGAAAAAAAATTCACCAATGCCATGGATATTCTCTCCTCTGTTTGCTAATTGCTATTTAAATTTCATTTTCCTTTTTCACGAGTAATATTATATTCCCTTTTTGTCTGATTTGCGTGAGAGTAACTATTTGGAAATGGGGATGCTAATTATTGGATCCTGTTGATTTCTATCTCGAAGTTAGTTCTTCCTTTTTGCTACATGCCTACATCACCAGCCTACCTGATCATATGTCTAGGTTTCCTTTCTTTTGCCTCCTCCTGCGAAAAAAAGAAAAGAAATTTAACTTCTCAAGCTTTCTCATTGTGTATCAGCATAATTGTTTGTCAAATGCTAGATCTGTTCCTGCATACTTACTTTCCATTCGCTTAATTTACTCTATTAATTTCCCCTTCTTTTTTGAAAGAAAAGAAAGAATCACGTTTTTGGCATGACTGCTGAATTTGCTGAGGCCTTCATTTCTTGTGACAGTTGTTTAATAGACTCTTTGGGACCTATTCTTTGTGTACATTTCTTGACATGCTTACCAATTTATGGAGGTCGAAAACTGAAACTTCTTATCAACCTGCAGGCACTAGATTATTGCCATTCACAGGGAATAATGCACAGGGATGTCAAACCTCATAACGTTATGATAGACCATGAACTGCGGAAGCTTCGCTTGATAGATTGGGGTCTTGCCGAATTTTACCACCCAGGGAAGGAATATAATGTTCGTGTGGCTTCAAGGTGAGATAATCTGCCGACAGTATGGCTGGACCGGCATAGTTGCTTTGCCAGCAACAACTTCCTACATATAGCATTGCTATTTGTAGATCCATGCTCTACTTGCAAATTATTCTCTGGACAAGTCATGAGTTTTTAATCAGAAAGCAAGTGACATTGTTATATATTTTTTAAGTCAGAAATAATAAAAGGAACATCATTCACTTACATATACAACAACTACCCGTCAGTTCCAAACTAGTCGGGGTCGTTATATGATTTTTGCTGTCCATGTTACTCCATTTAATCCCATATCTTGCGGACTTGTAAAGTTTAGAATCTCTATATTTTCTTAACTGACAAACTTCTGAAAAGCTAAAACACTCCTAGAAAGTATAGGACCTACAGGAAAATTCTAATATATTAATATATTCTCGACTAATATGTAGCATATATATAGAATTTTTTCTTCCATTGTGCCTTTCGTAAGTTCACATGGATCCTTAAAATTATAGGTCCTTAAAGACAACTTCCTTCCATGTGATTTTAGGTCTACTTCGTTTTTTAACAGCTCCACTCACCATAGTTTCACACTCAGGAGTCAGTGCATCAGGAGGGGTTAATGCAAGACATAATCAAATCATCTCAAGGAACAGCTGAGTTCTTAAAGAATACTTAAAACAATACCCATTAAAGAATACTTAAAACAATCAATGGGATTATAGGAAAAGGTTAGGAATTGTTTATGTAAAACTAATTCTGTATCAGCATAGCTGCATATGGGAAATTGGTTTTGTACCGTAAGTTAGTGGTTCATAAACTATCAATGCTATTGAAGCAAGTCTGAGTTCTTCTTTTCTTGCACTTCAGATACTTCAAGGGCCCTGAACTTCTAGTTGACTTGCAAGACTATGACTATTCTTTGGACATGTGGAGCCTTGGCTGCATGTTTGCAGGAATGGTGAGAAATTCTATGATTCATAATATAAGCTGTCAGTTGGTTTATAGTTTTATGCTATCAGTTGTGGGCCTGGGAAACTACAAACATCCGAAAGGACTTGTTAGAAGTTTGTATTTTGCTTATTTGAAATCAATTTTCCTTTTCCTCCTGTTTTCTTTGTGTCTGACCATACCTTTTCCTTGGTAGATTTTCCGCAAGGAACCTTTCTTTTATGGCCATGATAATCAGGATCAGCTCGTCAAAATTGCAAAGGTAATGCGTAGTAACTGACCAGTGACCAATGGGTTTATATACCTTAATTTTGTTGTTTGAGTGAGAGGGGGGAAGTTGATCATCTGAAAACAACCAAAGAAGTTGTTACTTCAGTTGCAAGTGAACACTCAATTTATAGAAGTAAAGCATAACTGCTTGACATGGAGTTGATAGATTATTGTTGTTATAGGTACTTGGGACAGATGAGTTGAATGCGTACTTGCACAAGTATCAACTAGAGCTTGATCCTCAGCTAGAGGCTATGGTTGGGAGGTATGCTTCTTGCTTTATCGCCAAGATAAAACTACGCTAAGGCAATTTGCAAAATAACTTAGAGCTGTGACTAAATAGGGTTACCAAGTTGATCTTAGCAACTAGCTTTAGCAGATGTGTGTCCTCTCTCATTAATTGCCAAAATTCTTAGCTATTGAAGGTGAATACAATCTGTCTTTCCCCTGCAGACACAGTAGGAAGCCGTGGTCCAAATTTATTAATGCAGACAATCAGCATCTAGTGTCACCGGAGGTACTCTTCTCTCTCTATTTATGTATCTATGGTATTTCTGAATAAGACGAAACCAGCAATGGTGACAAGTACATCTCAACCAATTGGCTGTTCTTCACTACCCACTTGATAATTGATTTTGGCTTCTCATTGCAGGCTATAGATTATCTTGACAAGCTTCTCCGTTACGATCATCAGACTAGACTTACGGCAAAAGAAGCAATGGTAATCCTCTTTATCCACTATTAATGAGCTTTAAACTCTGAGCCTCATCATTTTCTTCTCAGCTTCTGTCTTATATTGGTTTACTATTGCTTATTAAAGAAAATGGTTTCGTGACATTTTAAAACACATACTTTACCAAAACCAAAATGTAAGGTTATAAATAAATGAGATCAGTGAGGATGAGTGGGTGAAGAGACGCAACTTGACTAGTTTTTTGTTTTGAAATTCTGTTAGAAACAAGCTGGTGATTGTGAAGTGTCAGTGCTTTCTGTTTCTGCTCTTGGCTATGTTTTTTTCCTTTGTCATGATGTTGCATCTGCATCTTTCCTGGAATCAATCCACTCTCCCTTCTCAATTATTTCTTTTAACAACACTATACATGTATTTGTTTTGTTTTGCACAACTAGAGTATTGAACAGTGTGTTGGGAAACCTACTAACTGCTTTCTCTGCCCTGTTTCTTAGGCCCATCCATATTTCGGGCAAGTGAGGGCTGCTGAAACTAGCAGAATGAGGACACAGTAGCTTTCTTGTCTTGCTGTTAATGGGAAGAAAAAAAACTGTGTAATGTACCTTGTGTATCCATTTAAGTGACATTCGTGAGAACTATGTGGATTTGAACTTGAGCAGACATCTGAATTCAGGAATTACAGATCTTCATCATTGAACATTTCAAGAGAAATAGTGTTTTTTAGATTTCCTGATCGTGACCTTGATTGCAAATGGAAGTGACTTGCTGGGCGTCAAAAGTCACCCCACCCCCCCTTCCCCAAAGATACTATCTCCCTAGATGTGAACAAAAGCAGATTTTTGAAAATTAGTTCACTTTGTATATTAGTGCACTGGATTTTTCTGCATTCAGCTTTGGTGGTTTGTCTTTTGTGTAAGTTCATTGATATGGTGTAGGGCTATAGAAGAATGAA</genome_strand>
        <mrna_strand>GTGAAAAGGGTCCCAATAGCAGCATACAAGAGAGAGCAAAAAGCTTTCCCAATCTATGGCTTTTTCCTAAAAATGGTGTGTGAGTAAAGTAGTGTTATTGCTCTGGCGGTTGCATCAAACAGAAGCGGGGCCCAATTCCTTCGTTGCATCTACCCAGCCTGCGTCTTCTTTGTTGTCCCTTTTCCGAAATCCGATACCTTTATCAATAACTCTTCAGTCTCTGATTTCCGGATAAACCATGTCCAAAGCTCGAGTATACACCGATATCAATGTGCTTCGTCCTAGGGAATATTGGGATTACGAATCGCTAACTGTTCAATGGGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATCAGGATGACTATGAGGTTGTTCGAAAAGTTGGAAGAGGAAAATACAGTGAAGTTTTTGAAGGTATAAATGTTAACAGCAGGGAGAAGTGCATAATCAAGATCCTGAAACCTGTTAAGAAGAAAAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAAAAGAGAGATAAAGATATTGCAAAATCTCTGTGGTGGACCAAATATTGTCAAACTCCTTGATATCGTCAGAGATCAGCATTCAAAAACTCCAAGCTTGATTTTTGAGTACGTGAACAGCACAGATTTCAAGGTTTTGTACCCAACGCTAACAGACTATGACATACGGTACTACATATATGAGCTTCTCAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACTAGATTATTGCCATTCACAGGGAATAATGCACAGGGATGTCAAACCTCATAACGTTATGATAGACCATGAACTGCGGAAGCTTCGCTTGATAGATTGGGGTCTTGCCGAATTTTACCACCCAGGGAAGGAATATAATGTTCGTGTGGCTTCAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACTTCAAGGGCCCTGAACTTCTAGTTGACTTGCAAGACTATGACTATTCTTTGGACATGTGGAGCCTTGGCTGCATGTTTGCAGGAATG..........................................................................................................................................................................................ATTTTCCGCAAGGAACCTTTCTTTTATGGCCATGATAATCAGGATCAGCTCGTCAAAATTGCAAAG..............................................................................................................................................................................................GTACTTGGGACAGATGAGTTGAATGCGTACTTGCACAAGTATCAACTAGAGCTTGATCCTCAGCTAGAGGCTATGGTTGGGAG............................................................................................................................................................................................ACACAGTAGGAAGCCGTGGTCCAAATTTATTAATGCAGACAATCAGCATCTAGTGTCACCGGAG.......................................................................................................................................GCTATAGATTATCTTGACAAGCTTCTCCGTTACGATCATCAGACTAGACTTACGGCAAAAGAAGCAATG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCCATCCATATTTCGGGCAAGTGAGGGCTGCTGAAACTAGCAGAATGAGGACACAGTAGCTTTCTTGTCTTGCTGTTAATGGGAAGAAAAAAAACTGTGTAATGTACCTTGTGTATCCATTTAAGTGACATTCGTGAGAACTATGTGGATTTGAACTTGAGCAGACATCTGAATTCAGGAATTACAGATCTTCATCATTGAACATTTCAAGAGAAATAGTGTTTTTTAGATTTCCTGATCGTGACCTTGATTGCAAATGGAAGTGACTTGCTGGGCGTCAAAAGTCACCCCACCCCCCCTTCCCCAAAGATACTATCTCCCTAGATGTGAACAAAAGCAGATTTTTGAAAATTAGTTCACTTTGTATATTAGTGCACTGGATTTTTCTGCATTCA.....................................................AAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C00HBa0203P08-g3tq1/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U343760" ref_strand="+" ref_description="SGN-U343760        Tomato 200607 #1 [1 ESTs aligned]">
      <seq>ataggttttgctaattcaaccaagaaaatagtttaattatgtaggaaagatcttaatatgatgtgaaaatgacattcctggaggagcctattgacgtcctacaccagctattcattattgacaattgccgtagctatcatttgtcagacaaatttcagtggatatgctttcagtctgagactattacctagccaggtctagggtccaattaatccgtactagctttgaactaacattgcaaaacttgtcttcacccttctactggtggatttgggttatagggcaggtgcgatcacacctactttggatacaattgggaacaataacaattaaagtatcaagaaacgaaattcgatatcagctggtttgatatgtaccccgatggttttttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C00HBa0203P08-g3tq1/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C00HBa0203P08.2" temp_strand="+" temp_description="C00HBa0203P08.2  CU457813.5 htgs_phase:3 submitted_to_sgn_as:C04HBa0203P08 sequenced_by:sanger upload_account_name:uk">
        <position start="89944" stop="90935"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90244" g_stop="90635" g_length="392"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="392" r_length="392" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C00HBa0203P08.2" gen_strand="+" ref_id="SGN-U343760" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>392</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C00HBa0203P08.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U343760" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="90244" e_stop="90635"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATAGGTTTTGCTAATTCAACCAAGAAAATAGTTTAATTATGTAGGAAAGATCTTAATATGATGTGAAAATGACATTCCTGGAGGAGCCTATTGACGTCCTACACCAGCTATTCATTATTGACAATTGCCGTAGCTATCATTTGTCAGACAAATTTCAGTGGATATGCTTTCAGTCTGAGACTATTACCTAGCCAGGTCTAGGGTCCAATTAATCCGTACTAGCTTTGAACTAACATTGCAAAACTTGTCTTCACCCTTCTACTGGTGGATTTGGGTTATAGGGCAGGTGCGATCACACCTACTTTGGATACAATTGGGAACAATAACAATTAAAGTATCAAGAAACGAAATTCGATATCAGCTGGTTTGATATGTACCCCGATGGTTTTTTG</genome_strand>
        <mrna_strand>ATAGGTTTTGCTAATTCAACCAAGAAAATAGTTTAATTATGTAGGAAAGATCTTAATATGATGTGAAAATGACATTCCTGGAGGAGCCTATTGACGTCCTACACCAGCTATTCATTATTGACAATTGCCGTAGCTATCATTTGTCAGACAAATTTCAGTGGATATGCTTTCAGTCTGAGACTATTACCTAGCCAGGTCTAGGGTCCAATTAATCCGTACTAGCTTTGAACTAACATTGCAAAACTTGTCTTCACCCTTCTACTGGTGGATTTGGGTTATAGGGCAGGTGCGATCACACCTACTTTGGATACAATTGGGAACAATAACAATTAAAGTATCAAGAAACGAAATTCGATATCAGCTGGTTTGATATGTACCCCGATGGTTTTTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C00HBa0203P08-g3tq1/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U317616" ref_strand="+" ref_description="SGN-U317616        Tomato 200607 #1 [6 ESTs aligned] arabidopsis/peptide: | Symbol: None | similar to phototropic-responsive protein, putative [Arabidopsis thaliana] (TAIR:At3g49970.1); similar to hypothetical protein-like protein [Sorghum bicolor] (GB:AAO16690.1); contains InterPro domain BTB/POZ domain (InterPro:IPR000210); contains InterPro domain NPH3 (InterPro:IPR004249) | chr5:26901890-26904430 FORWARD | Aliases: None(evalue: 3e-129, score=382) genbank/nr: BTB/POZ;(evalue: 7e-137, score=406)">
      <seq>gaacttacagaagcaaagaaaatggcaacaaacatgtctttctattgtttgcttcattaggaaatagtttaagggaaaacgaatgaacatggttaaggcccgtaaaagactcgatcacccatggtggatgacatgttgatcttgataatgaacaaccttctactctaaacagtatgtccactaaaaaggagcttcttttctctgctacaaagaggacctctcaatggattttctcccaggagatcccaagtgatgtgactgtaaatgccgcaggaatctcctttacactacacaagttcccattagtttcaaagagtggatacataaggaagttggtctcggaatccaatgatgctgacgtttctacgatcgaaatccctgatatacctggtggaggagaggcatttgaatttgcagcaaagttttgttatggaataaattttgagataagcacaagaaacattgccttgctgagatgtgcagcagaatatcttgagatgacagaagactatgcagttgcaaatttggtgggaagaactgaggactactttagtgaagtaggaattgagagccttcatagtgctgttacaattttgcattcatcagaaaatcttattcccatttcagagaaagtgaaattggtgagccgctgcattgacacaattgcatatatagcctgtaaggataaccaattctccacatcaggttgagcagaagctggtatctatggattgacttcctccatgttttcgaacccgaagtctatagttaactggtggtcggaggatttaaccgtccttagaattgattttttccaaagggttctgattgcaatgatgggaaggggattcaagcagtatgcacttggaccaatattaatgctctatgcacagaagtctcttcgttgtttggaaatatttggaaagggaaggaaaaagattgaaccaaaacaagaacatgaaaaaagggttgttgtagaaaccatcgttggtcttctgccaagggagaaaaatgcattatccgttagcttttgtcaatgcttctccgagctgcaatatatctgcagaccacgatggctggcaggctcgacttggagaagaggatggattgcagcttggacaggctgtattggatgtatctgttaattccttcatattccttcagaggggacactttgtttgatgttgaaatcatgcagcttattgcgatgaatttccttgcctatgatatggaggaaaatcattgggagatgaagagtataatgagtctcattcattaagagacatggagcgagttggggaacttatggaaaattaccttgctaaaatagcttctgaccgtaatctatccatcacaagcttcattaatcttgctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C00HBa0203P08-g3tq1/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C00HBa0203P08.2" temp_strand="+" temp_description="C00HBa0203P08.2  CU457813.5 htgs_phase:3 submitted_to_sgn_as:C04HBa0203P08 sequenced_by:sanger upload_account_name:uk">
        <position start="90786" stop="93025"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="91086" g_stop="91311" g_length="226"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="226" r_length="226" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="91312" i_stop="91430" i_length="119">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="91431" g_stop="91500" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="227" r_stop="296" r_length="70" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="91501" i_stop="91879" i_length="379">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.965" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="91880" g_stop="92494" g_length="615"/>
          <reference_exon_boundary r_type="cDNA" r_start="297" r_stop="911" r_length="615" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="92495" i_stop="92575" i_length="81">
            <donor d_prob="0.753" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="92576" g_stop="93025" g_length="450"/>
          <reference_exon_boundary r_type="cDNA" r_start="912" r_stop="1361" r_length="450" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C00HBa0203P08.2" gen_strand="+" ref_id="SGN-U317616" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>1361</cumulative_length_of_scored_exons>
        <coverage percentage="0.990" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C00HBa0203P08.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U317616" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="91086" e_stop="91311"/>
          <exon e_start="91431" e_stop="91500"/>
          <exon e_start="91880" e_stop="92494"/>
          <exon e_start="92576" e_stop="93025"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAACTTACAGAAGCAAAGAAAATGGCAACAAACATGTCTTTCTATTGTTTGCTTCATTAGGAAATAGTTTAAGGGAAAACGAATGAACATGGTTAAGGCCCGTAAAAGACTCGATCACCCATGGTGGATGACATGTTGATCTTGATAATGAACAACCTTCTACTCTAAACAGTATGTCCACTAAAAAGGAGCTTCTTTTCTCTGCTACAAAGAGGACCTCTCAATGGTATGTGCTATTTTTGACTTCTTTATTTTCTACTTTCAAAAAGTAGCCTCTTCCATATATTATAGAATCATTACTCTGTTTTTCAAATTATTCGCCTAAATAATAATCTATCTTAACAGGATTTTCTCCCAGGAGATCCCAAGTGATGTGACTGTAAATGCCGCAGGAATCTCCTTTACACTACACAAGGTGCGTTATTTTTCTCTGCTTTCGTCATTAAGTCAACTGAACTTGGTGCACAATCCGAACTGTTGTTGGTTTTAGTTAAATTCCTAATTGGATTAGAATTATCGTCCCTTGGTCACATCTTACAACAGCAATAACAAAGTCAGTGTAATCCCAATATATATAGTGGGGTCTTGGGAGGGTGCGCAGCCTTACCCCTAACTTTATGGGATAGAGATGTTGTTTACGATTGACCACGGGCAACCTCCTCCTTTATCCGATGTTGGGACTGACAATGTGAACGAGCTCACACAGGCGGAGTTAGGCCTTGTTCACGCCTTGATTTTCATCTTTGATGATTGAATCAGTAGGTTTAATAGTGTATTAACTCTGCTGCTTGCAGTTCCCATTAGTTTCAAAGAGTGGATACATAAGGAAGTTGGTCTCGGAATCCAATGATGCTGACGTTTCTACGATCGAAATCCCTGATATACCTGGTGGAGGAGAGGCATTTGAATTTGCAGCAAAGTTTTGTTATGGAATAAATTTTGAGATAAGCACAAGAAACATTGCCTTGCTGAGATGTGCAGCAGAATATCTTGAGATGACAGAAGACTATGCAGTTGCAAATTTGGTGGGAAGAACTGAGGACTACTTTAGTGAAGTAGGAATTGAGAGCCTTCATAGTGCTGTTACAATTTTGCATTCATCAGAAAATCTTATTCCCATTTCAGAGAAAGTGAAATTGGTGAGCCGCTGCATTGACACAATTGCATATATAGCCTGTAAGGATAACCAATTCTCCACATCAGGTTGAGCAGAAGCTGGTATCTATGGATTGACTTCCTCCATGTTTTCGAACCCGAAGTCTATAGTTAACTGGTGGTCGGAGGATTTAACCGTCCTTAGAATTGATTTTTTCCAAAGGGTTCTGATTGCAATGATGGGAAGGGGATTCAAGCAGTATGCACTTGGACCAATATTAATGCTCTATGCACAGAAGTCTCTTCGTTGTTTGGTGAGGCCTTGTACTATAAAATCTTGATGAATTGGTTAAATTGAAATCTTTGTGCATATAGTAACTTTTTGTTTATAACAGGAAATATTTGGAAAGGGAAGGAAAAAGATTGAACCAAAACAAGAACATGAAAAAAGGGTTGTTGTAGAAACCATCGTTGGTCTTCTGCCAAGGGAGAAAAATGCATTATCCGTTAGCTTTTGTCAATGCTTCTCCGAGCTGCAATATATCTGCAGACCACGATGGCTGGCAGGCTCGACTTGGAGAAGAGGATGGATTGCAGCTTGGACAGGCTGTATTGGATGTATCTGTTAATTCCTTCATATTCCTTCAGAGGGGACACTTTGTTTGATGTTGAAATCATGCAGCTTATTGTGATGAATTTCCTTGCCTATGATATGGAGGAAAATCATTGGGAGATGAAGAGTATAATGAGTCTCATTCATTAAGAGACATGGAGCGAGTTGGGGAACTTATGGAAAATTACCTTGCTAAAATAGCTTCTGACCGTAATCTATCCATCACAAGCTT</genome_strand>
        <mrna_strand>GAACTTACAGAAGCAAAGAAAATGGCAACAAACATGTCTTTCTATTGTTTGCTTCATTAGGAAATAGTTTAAGGGAAAACGAATGAACATGGTTAAGGCCCGTAAAAGACTCGATCACCCATGGTGGATGACATGTTGATCTTGATAATGAACAACCTTCTACTCTAAACAGTATGTCCACTAAAAAGGAGCTTCTTTTCTCTGCTACAAAGAGGACCTCTCAATG.......................................................................................................................GATTTTCTCCCAGGAGATCCCAAGTGATGTGACTGTAAATGCCGCAGGAATCTCCTTTACACTACACAAG...........................................................................................................................................................................................................................................................................................................................................................................................TTCCCATTAGTTTCAAAGAGTGGATACATAAGGAAGTTGGTCTCGGAATCCAATGATGCTGACGTTTCTACGATCGAAATCCCTGATATACCTGGTGGAGGAGAGGCATTTGAATTTGCAGCAAAGTTTTGTTATGGAATAAATTTTGAGATAAGCACAAGAAACATTGCCTTGCTGAGATGTGCAGCAGAATATCTTGAGATGACAGAAGACTATGCAGTTGCAAATTTGGTGGGAAGAACTGAGGACTACTTTAGTGAAGTAGGAATTGAGAGCCTTCATAGTGCTGTTACAATTTTGCATTCATCAGAAAATCTTATTCCCATTTCAGAGAAAGTGAAATTGGTGAGCCGCTGCATTGACACAATTGCATATATAGCCTGTAAGGATAACCAATTCTCCACATCAGGTTGAGCAGAAGCTGGTATCTATGGATTGACTTCCTCCATGTTTTCGAACCCGAAGTCTATAGTTAACTGGTGGTCGGAGGATTTAACCGTCCTTAGAATTGATTTTTTCCAAAGGGTTCTGATTGCAATGATGGGAAGGGGATTCAAGCAGTATGCACTTGGACCAATATTAATGCTCTATGCACAGAAGTCTCTTCGTTGTTTG.................................................................................GAAATATTTGGAAAGGGAAGGAAAAAGATTGAACCAAAACAAGAACATGAAAAAAGGGTTGTTGTAGAAACCATCGTTGGTCTTCTGCCAAGGGAGAAAAATGCATTATCCGTTAGCTTTTGTCAATGCTTCTCCGAGCTGCAATATATCTGCAGACCACGATGGCTGGCAGGCTCGACTTGGAGAAGAGGATGGATTGCAGCTTGGACAGGCTGTATTGGATGTATCTGTTAATTCCTTCATATTCCTTCAGAGGGGACACTTTGTTTGATGTTGAAATCATGCAGCTTATTGCGATGAATTTCCTTGCCTATGATATGGAGGAAAATCATTGGGAGATGAAGAGTATAATGAGTCTCATTCATTAAGAGACATGGAGCGAGTTGGGGAACTTATGGAAAATTACCTTGCTAAAATAGCTTCTGACCGTAATCTATCCATCACAAGCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>19</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="-" PGL_start="9431" PGL_stop="6905"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="9431" e_stop="9174"/>
            <exon e_start="9057" e_stop="8948"/>
            <exon e_start="8031" e_stop="7343"/>
            <exon e_start="7107" e_stop="6905"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.996" acc_prob="0.969" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.981" e_score="1.000"/>
          <exon-intron don_prob="0.832" acc_prob="0.996" e_score="1.000"/>
          <exon-only e_score="0.995"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="9431" e_stop="9174" e_length="258"/>
          </exon>
          <intron i_serial="1" don_prob="0.996" acc_prob="0.969">
            <gDNA_intron_boundary i_start="9173" i_stop="9058" i_length="116"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="9057" e_stop="8948" e_length="110"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.981">
            <gDNA_intron_boundary i_start="8947" i_stop="8032" i_length="916"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="8031" e_stop="7343" e_length="689"/>
          </exon>
          <intron i_serial="3" don_prob="0.832" acc_prob="0.996">
            <gDNA_intron_boundary i_start="7342" i_stop="7108" i_length="235"/>
          </intron>
          <exon e_serial="4" e_score="0.995">
            <gDNA_exon_boundary e_start="7107" e_stop="6905" e_length="203"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="9431" stop="9174"/>
              <exon start="9057" stop="8948"/>
              <exon start="8031" stop="7343"/>
              <exon start="7107" stop="6905"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U319799" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AAAAGAAAAAAAAGAAAAACAGTTTTACAGCCGCAAGATCAGAAGTTCAGAAGCTCACAACACAACTGAAAGGAAAAAAAAATAAAAAATCAATCGCATCAATTGAGCTGCTTCCGATCCACTTGAGCCGCCGGCGATGGCGTCGAAAGTTACTGATAGGATTGAACTAGCTAAGCTTTGTAGCTCTAAGGAGTGGTCGAAAGCAATTCGAATTCTCGATTCTCTTCTTGCTCAAACTTGCGTCATTCAAGATATCTG : CAACCGAGCGTTTTGCTATAGTCAATTGGAGCTTCACAAGCATGTTATTAAGGATTGTGATAAGGCACTTCAGCTCGATCCTAAGCTTCTTCAAGCTTATATATTCAAAG : GACGTGCATTATCTGCTCTTGGTAAGAAAGAGGAAGCTCTTCTAGTTTGGGAGCAAGGGTATGAACATGCAGTTCATCAGTCCGCAGACTTAAAGCAACTGTTAGAGCTTGAAGAGCTGCTCAAAATTGCAAAGCAGAACACCGCAGTTGGCAGCAACAATCATTCGGTGCAGTCATCTGGCCCTGAGTCCAACACTGGACCTCCTCTTTCTACCAAATCTGGTGAAACTTGTGATATTAGTAAGGCCTCAGATAGGGAACTTAAAACATGCAGCAGTGGGATGTTGGAAAGCTCTGAGAAATCAAAGAATAGCTCTGTTTTACAAAATTCCTCAAGTAATAATTCCAAAAAGCATAAGAAGATTGAGTCTGAATCAAAGGAATTGCATGAGAGACAAGCAAATAAAACCAACAACAATTGCAAAAAATTGGGTTATCCATCTCTGGTTTGCAGTGAGTTAAGTGATATATCTGAAGACAGTAGGAAATCATCTGCAGTAACTAGTGAATCAAGTGAACAGTCAGAACCAAATGAGTTGCAGGAAATTCTCAGTCAGTTGAATAATAAATGTGATGTTCGCGTTGAATTGAGTGATGAAGGCAAGAGAAACAAAAAATTTTGTGTTACCAGGGTCAACAAAACCAAGTCCATTAACGTTGATTTCCGATTATCAAGGGGAATAGCACAG : GTACTGGGATACCATGCTCATGCATAGCAGGAAAGGCCTTCTACTGCAGTCTTCATGTCTTTTCTGTTCACTTTGCTTATTTCAGTTGTAATTTGGTGATTACACTCCACTTTTAATTTTGTGAACTTAACTGGAAGATTCTGCATATGTTCAAAGCTTGGGTCAACTAAGCTCTATTATTAGAATTCATTTTCTTCAGTTAC</gDNA_template>
            <first_frame> K  R  K  K  R  K  T  V  L  Q  P  Q  D  Q  K  F  R  S  S  Q  H  N  *  K  E  K  K  I  K  N  Q  S  H  Q  L  S  C  F  R  S  T  *  A  A  G  D  G  V  E  S  Y  *  *  D  *  T  S  *  A  L  *  L  *  G  V  V  E  S  N  S  N  S  R  F  S  S  C  S  N  L  R  H  S  R  Y  L  :  Q  P  S  V  L  L  *  S  I  G  A  S  Q  A  C  Y  *  G  L  *  *  G  T  S  A  R  S  *  A  S  S  S  L  Y  I  Q  R :   T  C  I  I  C  S  W  *  E  R  G  S  S  S  S  L  G  A  R  V  *  T  C  S  S  S  V  R  R  L  K  A  T  V  R  A  *  R  A  A  Q  N  C  K  A  E  H  R  S  W  Q  Q  Q  S  F  G  A  V  I  W  P  *  V  Q  H  W  T  S  S  F  Y  Q  I  W  *  N  L  *  Y  *  *  G  L  R  *  G  T  *  N  M  Q  Q  W  D  V  G  K  L  *  E  I  K  E  *  L  C  F  T  K  F  L  K  *  *  F  Q  K  A  *  E  D  *  V  *  I  K  G  I  A  *  E  T  S  K  *  N  Q  Q  Q  L  Q  K  I  G  L  S  I  S  G  L  Q  *  V  K  *  Y  I  *  R  Q  *  E  I  I  C  S  N  *  *  I  K  *  T  V  R  T  K  *  V  A  G  N  S  Q  S  V  E  *  *  M  *  C  S  R  *  I  E  *  *  R  Q  E  K  Q  K  I  L  C  Y  Q  G  Q  Q  N  Q  V  H  *  R  *  F  P  I  I  K  G  N  S  T   : G  T  G  I  P  C  S  C  I  A  G  K  A  F  Y  C  S  L  H  V  F  S  V  H  F  A  Y  F  S  C  N  L  V  I  T  L  H  F  *  F  C  E  L  N  W  K  I  L  H  M  F  K  A  W  V  N  *  A  L  L  L  E  F  I  F  F  S  Y </first_frame>
            <second_frame>  K  E  K  K  E  K  Q  F  Y  S  R  K  I  R  S  S  E  A  H  N  T  T  E  R  K  K  K  *  K  I  N  R  I  N  *  A  A  S  D  P  L  E  P  P  A  M  A  S  K  V  T  D  R  I  E  L  A  K  L  C  S  S  K  E  W  S  K  A  I  R  I  L  D  S  L  L  A  Q  T  C  V  I  Q  D  I  C :   N  R  A  F  C  Y  S  Q  L  E  L  H  K  H  V  I  K  D  C  D  K  A  L  Q  L  D  P  K  L  L  Q  A  Y  I  F  K   : G  R  A  L  S  A  L  G  K  K  E  E  A  L  L  V  W  E  Q  G  Y  E  H  A  V  H  Q  S  A  D  L  K  Q  L  L  E  L  E  E  L  L  K  I  A  K  Q  N  T  A  V  G  S  N  N  H  S  V  Q  S  S  G  P  E  S  N  T  G  P  P  L  S  T  K  S  G  E  T  C  D  I  S  K  A  S  D  R  E  L  K  T  C  S  S  G  M  L  E  S  S  E  K  S  K  N  S  S  V  L  Q  N  S  S  S  N  N  S  K  K  H  K  K  I  E  S  E  S  K  E  L  H  E  R  Q  A  N  K  T  N  N  N  C  K  K  L  G  Y  P  S  L  V  C  S  E  L  S  D  I  S  E  D  S  R  K  S  S  A  V  T  S  E  S  S  E  Q  S  E  P  N  E  L  Q  E  I  L  S  Q  L  N  N  K  C  D  V  R  V  E  L  S  D  E  G  K  R  N  K  K  F  C  V  T  R  V  N  K  T  K  S  I  N  V  D  F  R  L  S  R  G  I  A  Q  :  V  L  G  Y  H  A  H  A  *  Q  E  R  P  S  T  A  V  F  M  S  F  L  F  T  L  L  I  S  V  V  I  W  *  L  H  S  T  F  N  F  V  N  L  T  G  R  F  C  I  C  S  K  L  G  S  T  K  L  Y  Y  *  N  S  F  S  S  V   </second_frame>
            <third_frame>   K  K  K  K  K  N  S  F  T  A  A  R  S  E  V  Q  K  L  T  T  Q  L  K  G  K  K  N  K  K  S  I  A  S  I  E  L  L  P  I  H  L  S  R  R  R  W  R  R  K  L  L  I  G  L  N  *  L  S  F  V  A  L  R  S  G  R  K  Q  F  E  F  S  I  L  F  L  L  K  L  A  S  F  K  I  S   : A  T  E  R  F  A  I  V  N  W  S  F  T  S  M  L  L  R  I  V  I  R  H  F  S  S  I  L  S  F  F  K  L  I  Y  S  K  :  D  V  H  Y  L  L  L  V  R  K  R  K  L  F  *  F  G  S  K  G  M  N  M  Q  F  I  S  P  Q  T  *  S  N  C  *  S  L  K  S  C  S  K  L  Q  S  R  T  P  Q  L  A  A  T  I  I  R  C  S  H  L  A  L  S  P  T  L  D  L  L  F  L  P  N  L  V  K  L  V  I  L  V  R  P  Q  I  G  N  L  K  H  A  A  V  G  C  W  K  A  L  R  N  Q  R  I  A  L  F  Y  K  I  P  Q  V  I  I  P  K  S  I  R  R  L  S  L  N  Q  R  N  C  M  R  D  K  Q  I  K  P  T  T  I  A  K  N  W  V  I  H  L  W  F  A  V  S  *  V  I  Y  L  K  T  V  G  N  H  L  Q  *  L  V  N  Q  V  N  S  Q  N  Q  M  S  C  R  K  F  S  V  S  *  I  I  N  V  M  F  A  L  N  *  V  M  K  A  R  E  T  K  N  F  V  L  P  G  S  T  K  P  S  P  L  T  L  I  S  D  Y  Q  G  E  *  H  R :   Y  W  D  T  M  L  M  H  S  R  K  G  L  L  L  Q  S  S  C  L  F  C  S  L  C  L  F  Q  L  *  F  G  D  Y  T  P  L  L  I  L  *  T  *  L  E  D  S  A  Y  V  Q  S  L  G  Q  L  S  S  I  I  R  I  H  F  L  Q  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C00HBa0203P08.2" strand="-"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="9325" stop="9174"/>
                    <exon start="9057" stop="8948"/>
                    <exon start="8031" stop="7343"/>
                    <exon start="7107" stop="7081"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>975</number_coding_nucleotides>
                  <number_encoded_amino_acids>325</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>AASDPLEPPAMASKVTDRIELAKLCSSKEWSKAIRILDSLLAQTCVIQDICNRAFCYSQLELHKHVIKDCDKALQLDPKLLQAYIFKGRALSALGKKEEALLVWEQGYEHAVHQSADLKQLLELEELLKIAKQNTAVGSNNHSVQSSGPESNTGPPLSTKSGETCDISKASDRELKTCSSGMLESSEKSKNSSVLQNSSSNNSKKHKKIESESKELHERQANKTNNNCKKLGYPSLVCSELSDISEDSRKSSAVTSESSEQSEPNELQEILSQLNNKCDVRVELSDEGKRNKKFCVTRVNKTKSINVDFRLSRGIAQVLGYHAHA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="-" PGL_start="22399" PGL_stop="20793"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="22399" e_stop="21726"/>
            <exon e_start="21316" e_stop="20793"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.934" e_score="0.994"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.994">
            <gDNA_exon_boundary e_start="22399" e_stop="21726" e_length="674"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.934">
            <gDNA_intron_boundary i_start="21725" i_stop="21317" i_length="409"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="21316" e_stop="20793" e_length="524"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="22399" stop="21726"/>
              <exon start="21316" stop="20793"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U326552" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TCTAGTGTTTTTCGGTAGAAGTTATTAATATTTTATTATAGTAAAAAATATGTGTGACTTTTATTTTAGCATAAAACAGATAAAGTAACTTTACTAAAGTATTTCAATAACTTGATAACCATAAAAACCCTTCCATTAATTAGCACTCTTGCAATACTAATGTTATGATTTGTGAACCTAAAATTAACAGCCACCGGCCAATCCATCTTCCTTCGTACCAAAAAGTCGGCTGGTCGTCTCCTCCAATTTCCACACCACACCTTAATAAAGTCTAAAAATTGGGAAACAAAAAACTCAGACCAAAAAATGGGAATCGGTGAAGAAGCTCACAACGTAAAAGTTGTAGGTTCAGGCGAAAAGACCATCGTACTGGGTCATGGCTTCGGCACCGATCAGTCTGTTTGGAAACAGCTTGTTCCTTACCTCGTTGATGAATATCGTGTTGTACTTTATGATAATATGGGTGCTGGACCGACAAATCCTGATTACTTCGATTTTGATCGATATTCTTCCCTTGAAGGTTATGCGTACGATTTAATTTCCATTTTGGAGGAACTTCAAATCAATCGTTGCATGTACTTAGGCCATTCCTTATCGGCTATGACTGGTGTTGTTGCTTCTATTTTTCGTCCCGATCTCTTTTCCAAACTCATTCTTGTATCAGCTTCCCCAAG : GTTCATAAATACGGATGACTATTATGGAGGATTCGAATCGGAAGACATAGAACAACTATGTCAAGCAATGGAGTCGAACTACAAGGCATGGGTATCTGGTTTTGCGCCACTAGCGGTGGGAGGTGACATGAATTCCGTGGCAGTACAAGAATTCAGCAGGACATTATTCAACATGAGACCAGACATAGCACTCAGTGTTTTCCGCACTGTTTTCACGTTCGACCTAAGGCATTATCTGTCCCGTGTTACTGTCCCTTGCCATATCATACAGAGCTCAATGGATGTTGCAATGCCAGTGACTGTTTCTGAATATTTACACAGAAATTTAGGCGGAAAATCGATCGTAGAGATCATCTCAACAGAAGGTCATCTTCCACATTTGAGCGCACCTGAGGCTACTATCCCCGTATTGCTTCGACACATTTCACATGATATTACTGCTGATGCTTCTTCTAGTTAAAGGATAATGAAAAAAACTTCTTCAAAAGTACTCATCATCAAAATAAATATACATGTGTATTTCT</gDNA_template>
            <first_frame> S  S  V  F  R  *  K  L  L  I  F  Y  Y  S  K  K  Y  V  *  L  L  F  *  H  K  T  D  K  V  T  L  L  K  Y  F  N  N  L  I  T  I  K  T  L  P  L  I  S  T  L  A  I  L  M  L  *  F  V  N  L  K  L  T  A  T  G  Q  S  I  F  L  R  T  K  K  S  A  G  R  L  L  Q  F  P  H  H  T  L  I  K  S  K  N  W  E  T  K  N  S  D  Q  K  M  G  I  G  E  E  A  H  N  V  K  V  V  G  S  G  E  K  T  I  V  L  G  H  G  F  G  T  D  Q  S  V  W  K  Q  L  V  P  Y  L  V  D  E  Y  R  V  V  L  Y  D  N  M  G  A  G  P  T  N  P  D  Y  F  D  F  D  R  Y  S  S  L  E  G  Y  A  Y  D  L  I  S  I  L  E  E  L  Q  I  N  R  C  M  Y  L  G  H  S  L  S  A  M  T  G  V  V  A  S  I  F  R  P  D  L  F  S  K  L  I  L  V  S  A  S  P  R :   F  I  N  T  D  D  Y  Y  G  G  F  E  S  E  D  I  E  Q  L  C  Q  A  M  E  S  N  Y  K  A  W  V  S  G  F  A  P  L  A  V  G  G  D  M  N  S  V  A  V  Q  E  F  S  R  T  L  F  N  M  R  P  D  I  A  L  S  V  F  R  T  V  F  T  F  D  L  R  H  Y  L  S  R  V  T  V  P  C  H  I  I  Q  S  S  M  D  V  A  M  P  V  T  V  S  E  Y  L  H  R  N  L  G  G  K  S  I  V  E  I  I  S  T  E  G  H  L  P  H  L  S  A  P  E  A  T  I  P  V  L  L  R  H  I  S  H  D  I  T  A  D  A  S  S  S  *  R  I  M  K  K  T  S  S  K  V  L  I  I  K  I  N  I  H  V  Y  F  </first_frame>
            <second_frame>  L  V  F  F  G  R  S  Y  *  Y  F  I  I  V  K  N  M  C  D  F  Y  F  S  I  K  Q  I  K  *  L  Y  *  S  I  S  I  T  *  *  P  *  K  P  F  H  *  L  A  L  L  Q  Y  *  C  Y  D  L  *  T  *  N  *  Q  P  P  A  N  P  S  S  F  V  P  K  S  R  L  V  V  S  S  N  F  H  T  T  P  *  *  S  L  K  I  G  K  Q  K  T  Q  T  K  K  W  E  S  V  K  K  L  T  T  *  K  L  *  V  Q  A  K  R  P  S  Y  W  V  M  A  S  A  P  I  S  L  F  G  N  S  L  F  L  T  S  L  M  N  I  V  L  Y  F  M  I  I  W  V  L  D  R  Q  I  L  I  T  S  I  L  I  D  I  L  P  L  K  V  M  R  T  I  *  F  P  F  W  R  N  F  K  S  I  V  A  C  T  *  A  I  P  Y  R  L  *  L  V  L  L  L  L  F  F  V  P  I  S  F  P  N  S  F  L  Y  Q  L  P  Q   : G  S  *  I  R  M  T  I  M  E  D  S  N  R  K  T  *  N  N  Y  V  K  Q  W  S  R  T  T  R  H  G  Y  L  V  L  R  H  *  R  W  E  V  T  *  I  P  W  Q  Y  K  N  S  A  G  H  Y  S  T  *  D  Q  T  *  H  S  V  F  S  A  L  F  S  R  S  T  *  G  I  I  C  P  V  L  L  S  L  A  I  S  Y  R  A  Q  W  M  L  Q  C  Q  *  L  F  L  N  I  Y  T  E  I  *  A  E  N  R  S  *  R  S  S  Q  Q  K  V  I  F  H  I  *  A  H  L  R  L  L  S  P  Y  C  F  D  T  F  H  M  I  L  L  L  M  L  L  L  V  K  G  *  *  K  K  L  L  Q  K  Y  S  S  S  K  *  I  Y  M  C  I  S </second_frame>
            <third_frame>   *  C  F  S  V  E  V  I  N  I  L  L  *  *  K  I  C  V  T  F  I  L  A  *  N  R  *  S  N  F  T  K  V  F  Q  *  L  D  N  H  K  N  P  S  I  N  *  H  S  C  N  T  N  V  M  I  C  E  P  K  I  N  S  H  R  P  I  H  L  P  S  Y  Q  K  V  G  W  S  S  P  P  I  S  T  P  H  L  N  K  V  *  K  L  G  N  K  K  L  R  P  K  N  G  N  R  *  R  S  S  Q  R  K  S  C  R  F  R  R  K  D  H  R  T  G  S  W  L  R  H  R  S  V  C  L  E  T  A  C  S  L  P  R  *  *  I  S  C  C  T  L  *  *  Y  G  C  W  T  D  K  S  *  L  L  R  F  *  S  I  F  F  P  *  R  L  C  V  R  F  N  F  H  F  G  G  T  S  N  Q  S  L  H  V  L  R  P  F  L  I  G  Y  D  W  C  C  C  F  Y  F  S  S  R  S  L  F  Q  T  H  S  C  I  S  F  P  K  :  V  H  K  Y  G  *  L  L  W  R  I  R  I  G  R  H  R  T  T  M  S  S  N  G  V  E  L  Q  G  M  G  I  W  F  C  A  T  S  G  G  R  *  H  E  F  R  G  S  T  R  I  Q  Q  D  I  I  Q  H  E  T  R  H  S  T  Q  C  F  P  H  C  F  H  V  R  P  K  A  L  S  V  P  C  Y  C  P  L  P  Y  H  T  E  L  N  G  C  C  N  A  S  D  C  F  *  I  F  T  Q  K  F  R  R  K  I  D  R  R  D  H  L  N  R  R  S  S  S  T  F  E  R  T  *  G  Y  Y  P  R  I  A  S  T  H  F  T  *  Y  Y  C  *  C  F  F  *  L  K  D  N  E  K  N  F  F  K  S  T  H  H  Q  N  K  Y  T  C  V  F   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C00HBa0203P08.2" strand="-"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="22231" stop="21726"/>
                    <exon start="21316" stop="20857"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>963</number_coding_nucleotides>
                  <number_encoded_amino_acids>321</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FVNLKLTATGQSIFLRTKKSAGRLLQFPHHTLIKSKNWETKNSDQKMGIGEEAHNVKVVGSGEKTIVLGHGFGTDQSVWKQLVPYLVDEYRVVLYDNMGAGPTNPDYFDFDRYSSLEGYAYDLISILEELQINRCMYLGHSLSAMTGVVASIFRPDLFSKLILVSASPRFINTDDYYGGFESEDIEQLCQAMESNYKAWVSGFAPLAVGGDMNSVAVQEFSRTLFNMRPDIALSVFRTVFTFDLRHYLSRVTVPCHIIQSSMDVAMPVTVSEYLHRNLGGKSIVEIISTEGHLPHLSAPEATIPVLLRHISHDITADASSS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="-" PGL_start="26655" PGL_stop="23531"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="26655" e_stop="26345"/>
            <exon e_start="25977" e_stop="25595"/>
            <exon e_start="24291" e_stop="24055"/>
            <exon e_start="23846" e_stop="23531"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.999" e_score="0.984"/>
          <exon-intron don_prob="0.957" acc_prob="0.977" e_score="1.000"/>
          <exon-intron don_prob="0.804" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="0.978"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.984">
            <gDNA_exon_boundary e_start="26655" e_stop="26345" e_length="311"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.999">
            <gDNA_intron_boundary i_start="26344" i_stop="25978" i_length="367"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="25977" e_stop="25595" e_length="383"/>
          </exon>
          <intron i_serial="2" don_prob="0.957" acc_prob="0.977">
            <gDNA_intron_boundary i_start="25594" i_stop="24292" i_length="1303"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="24291" e_stop="24055" e_length="237"/>
          </exon>
          <intron i_serial="3" don_prob="0.804" acc_prob="0.999">
            <gDNA_intron_boundary i_start="24054" i_stop="23847" i_length="208"/>
          </intron>
          <exon e_serial="4" e_score="0.978">
            <gDNA_exon_boundary e_start="23846" e_stop="23531" e_length="316"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26655" stop="26345"/>
              <exon start="25977" stop="25595"/>
              <exon start="24291" stop="24055"/>
              <exon start="23846" stop="23531"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U326110" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GTCTTCTTTCTTTTCTTCAAAAAAAAAAAAAAATCCTCTTTCACTCTACAGCCAGCAGTCTAAGATGTTAAGCTCCTGTTTTGGGAGCTGCTTTGGTGGGGACGATGGTGATGATCTTTTATGGCATATGGACTTGAAGCCACATGCCACAGGTGAATATTCTGTTGCTGTAGTTCAGGCCAATTCTTTGCTTGAAGATCAAGGTCAAGTTTTTACAACCCCTAGTGCTACTTATGTGGGTGTTTATGATGGTCATGGTGGCCCGCAAGCTTCTCGCTTCATCAACAACAATCTCTTCCCTCAACTACAAA : AGCTGGCTTTGGAAGAAGGAGGATTGTCTGAGGACGTGATCAGGAAAGCATTTGATGCTATTGAGGAGGGATTCTTGCGTTTGGTGAAACAGTCTTGGCTGGATCAACCTCAGATTGCATCTGCAGGGTCTTGTTGTCTATTTGGAGCAATCTCAAAAGATGAATTGTATGTGGCAAATCTTGGGGACTCCAGGGCAGTGCTTGGCAGGAGAGCAGAGACAGGCCAGACGGGTGATTCAGCAGTAGTAGTGGCAGAACGTTTGTCGATAGATCATAATGTTGGGGTTGAGGAGGTTAGGAAGGAGGTAGAGGCACTGCATCCAGATGATTCTCATGTTGTGGTCTACGTTCGAGGGGTTTGGAGAATTAAGGGTATAATTCAG : GTTTCTAGATCAATTGGTGATGTCTATCTGAAGAAACCTGAGTTTAATAGAGATCCTATGTTCATACAATATGGATATCCTATTCCTTTAAAAAGAGCTGTAATGTCAGCAGAGCCCTCCATATTGATCCGAAAGATAAGACCAGAAGACTTATTTTTGATATTTGCATCGGATGGCCTATGGGATCAACTAACCGATGACGAAGCTAAGGATATTGTTTTGAAGAATCCTAGAATT : GGAATAGCAAAACGATTAGTGAGAGCTGCCCTTGAGGGTGCTGCAGAGAAGAAAGAAATGAGATATGAGGACATCAAACGACTAGAGAAGGGGGAAAGGCGGCACGTTCATGATGATATCACAGTTATTGTGATATATTTGGATCACCCTGGAAGGTCCTCAAATTCTGGAATTAACATTGTTAAGGGCACGAATGTCCCTCTTGACATATACTCCTTGAACTCGGGTCATTAAGGAGAGAACATATCTTATGTTTCCCCATGAAAAGTGTCTAATACATGTATACATTATATATACCATTTTGTAAATACGTCGT</gDNA_template>
            <first_frame> V  F  F  L  F  F  K  K  K  K  K  S  S  F  T  L  Q  P  A  V  *  D  V  K  L  L  F  W  E  L  L  W  W  G  R  W  *  *  S  F  M  A  Y  G  L  E  A  T  C  H  R  *  I  F  C  C  C  S  S  G  Q  F  F  A  *  R  S  R  S  S  F  Y  N  P  *  C  Y  L  C  G  C  L  *  W  S  W  W  P  A  S  F  S  L  H  Q  Q  Q  S  L  P  S  T  T  K :   A  G  F  G  R  R  R  I  V  *  G  R  D  Q  E  S  I  *  C  Y  *  G  G  I  L  A  F  G  E  T  V  L  A  G  S  T  S  D  C  I  C  R  V  L  L  S  I  W  S  N  L  K  R  *  I  V  C  G  K  S  W  G  L  Q  G  S  A  W  Q  E  S  R  D  R  P  D  G  *  F  S  S  S  S  G  R  T  F  V  D  R  S  *  C  W  G  *  G  G  *  E  G  G  R  G  T  A  S  R  *  F  S  C  C  G  L  R  S  R  G  L  E  N  *  G  Y  N  S   : G  F  *  I  N  W  *  C  L  S  E  E  T  *  V  *  *  R  S  Y  V  H  T  I  W  I  S  Y  S  F  K  K  S  C  N  V  S  R  A  L  H  I  D  P  K  D  K  T  R  R  L  I  F  D  I  C  I  G  W  P  M  G  S  T  N  R  *  R  S  *  G  Y  C  F  E  E  S  *  N   : W  N  S  K  T  I  S  E  S  C  P  *  G  C  C  R  E  E  R  N  E  I  *  G  H  Q  T  T  R  E  G  G  K  A  A  R  S  *  *  Y  H  S  Y  C  D  I  F  G  S  P  W  K  V  L  K  F  W  N  *  H  C  *  G  H  E  C  P  S  *  H  I  L  L  E  L  G  S  L  R  R  E  H  I  L  C  F  P  M  K  S  V  *  Y  M  Y  T  L  Y  I  P  F  C  K  Y  V   </first_frame>
            <second_frame>  S  S  F  F  S  S  K  K  K  K  N  P  L  S  L  Y  S  Q  Q  S  K  M  L  S  S  C  F  G  S  C  F  G  G  D  D  G  D  D  L  L  W  H  M  D  L  K  P  H  A  T  G  E  Y  S  V  A  V  V  Q  A  N  S  L  L  E  D  Q  G  Q  V  F  T  T  P  S  A  T  Y  V  G  V  Y  D  G  H  G  G  P  Q  A  S  R  F  I  N  N  N  L  F  P  Q  L  Q   : K  L  A  L  E  E  G  G  L  S  E  D  V  I  R  K  A  F  D  A  I  E  E  G  F  L  R  L  V  K  Q  S  W  L  D  Q  P  Q  I  A  S  A  G  S  C  C  L  F  G  A  I  S  K  D  E  L  Y  V  A  N  L  G  D  S  R  A  V  L  G  R  R  A  E  T  G  Q  T  G  D  S  A  V  V  V  A  E  R  L  S  I  D  H  N  V  G  V  E  E  V  R  K  E  V  E  A  L  H  P  D  D  S  H  V  V  V  Y  V  R  G  V  W  R  I  K  G  I  I  Q  :  V  S  R  S  I  G  D  V  Y  L  K  K  P  E  F  N  R  D  P  M  F  I  Q  Y  G  Y  P  I  P  L  K  R  A  V  M  S  A  E  P  S  I  L  I  R  K  I  R  P  E  D  L  F  L  I  F  A  S  D  G  L  W  D  Q  L  T  D  D  E  A  K  D  I  V  L  K  N  P  R  I  :  G  I  A  K  R  L  V  R  A  A  L  E  G  A  A  E  K  K  E  M  R  Y  E  D  I  K  R  L  E  K  G  E  R  R  H  V  H  D  D  I  T  V  I  V  I  Y  L  D  H  P  G  R  S  S  N  S  G  I  N  I  V  K  G  T  N  V  P  L  D  I  Y  S  L  N  S  G  H  *  G  E  N  I  S  Y  V  S  P  *  K  V  S  N  T  C  I  H  Y  I  Y  H  F  V  N  T  S  </second_frame>
            <third_frame>   L  L  S  F  L  Q  K  K  K  K  I  L  F  H  S  T  A  S  S  L  R  C  *  A  P  V  L  G  A  A  L  V  G  T  M  V  M  I  F  Y  G  I  W  T  *  S  H  M  P  Q  V  N  I  L  L  L  *  F  R  P  I  L  C  L  K  I  K  V  K  F  L  Q  P  L  V  L  L  M  W  V  F  M  M  V  M  V  A  R  K  L  L  A  S  S  T  T  I  S  S  L  N  Y  K  :  S  W  L  W  K  K  E  D  C  L  R  T  *  S  G  K  H  L  M  L  L  R  R  D  S  C  V  W  *  N  S  L  G  W  I  N  L  R  L  H  L  Q  G  L  V  V  Y  L  E  Q  S  Q  K  M  N  C  M  W  Q  I  L  G  T  P  G  Q  C  L  A  G  E  Q  R  Q  A  R  R  V  I  Q  Q  *  *  W  Q  N  V  C  R  *  I  I  M  L  G  L  R  R  L  G  R  R  *  R  H  C  I  Q  M  I  L  M  L  W  S  T  F  E  G  F  G  E  L  R  V  *  F  R :   F  L  D  Q  L  V  M  S  I  *  R  N  L  S  L  I  E  I  L  C  S  Y  N  M  D  I  L  F  L  *  K  E  L  *  C  Q  Q  S  P  P  Y  *  S  E  R  *  D  Q  K  T  Y  F  *  Y  L  H  R  M  A  Y  G  I  N  *  P  M  T  K  L  R  I  L  F  *  R  I  L  E  L :   E  *  Q  N  D  *  *  E  L  P  L  R  V  L  Q  R  R  K  K  *  D  M  R  T  S  N  D  *  R  R  G  K  G  G  T  F  M  M  I  S  Q  L  L  *  Y  I  W  I  T  L  E  G  P  Q  I  L  E  L  T  L  L  R  A  R  M  S  L  L  T  Y  T  P  *  T  R  V  I  K  E  R  T  Y  L  M  F  P  H  E  K  C  L  I  H  V  Y  I  I  Y  T  I  L  *  I  R  R </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C00HBa0203P08.2" strand="-"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="26654" stop="26345"/>
                    <exon start="25977" stop="25595"/>
                    <exon start="24291" stop="24055"/>
                    <exon start="23846" stop="23613"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1161</number_coding_nucleotides>
                  <number_encoded_amino_acids>387</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SSFFSSKKKKNPLSLYSQQSKMLSSCFGSCFGGDDGDDLLWHMDLKPHATGEYSVAVVQANSLLEDQGQVFTTPSATYVGVYDGHGGPQASRFINNNLFPQLQKLALEEGGLSEDVIRKAFDAIEEGFLRLVKQSWLDQPQIASAGSCCLFGAISKDELYVANLGDSRAVLGRRAETGQTGDSAVVVAERLSIDHNVGVEEVRKEVEALHPDDSHVVVYVRGVWRIKGIIQVSRSIGDVYLKKPEFNRDPMFIQYGYPIPLKRAVMSAEPSILIRKIRPEDLFLIFASDGLWDQLTDDEAKDIVLKNPRIGIAKRLVRAALEGAAEKKEMRYEDIKRLEKGERRHVHDDITVIVIYLDHPGRSSNSGINIVKGTNVPLDIYSLNSGH*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="+" PGL_start="27543" PGL_stop="30120"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="27543" e_stop="28173"/>
            <exon e_start="29547" e_stop="30120"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.998" e_score="0.998"/>
          <exon-only e_score="0.977"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="27543" e_stop="28173" e_length="631"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.998">
            <gDNA_intron_boundary i_start="28174" i_stop="29546" i_length="1373"/>
          </intron>
          <exon e_serial="2" e_score="0.977">
            <gDNA_exon_boundary e_start="29547" e_stop="30120" e_length="574"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="27543" stop="28173"/>
              <exon start="29547" stop="29588"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U313917" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28110" stop="28173"/>
              <exon start="29547" stop="30120"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U334672" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTTAATCCGACGAGCTATTTATAGGGTTCAGTCATCTTCGCCGGCGGCGAGGCTACTTGTTGCCCGAGCTCACGCTTCGGACACCAAATCCCAGCAGGTCCAACCTCAAGTCGTTTCAAATTTACCGATGGAATCCAGATAACCCAGGGAAACCCGAGCTCCAAGAATACAAAATTGATCTGAAGGAATGTGGCCCTATGGTCTTAGACGCCCTAATCAAAATCAAGAATGAAGTTGACCCTTCACCAACCTTCAGAAGATCTTGCAGAGAAGGGATCTGTGGGTCCTGTGCCATGAACATCGACGGCTGTAATGGACTCGCTTGTTTGACAAAGATCTCATCGGATTCTGTATCGACGATTACGCCACTGCCACATATGTTTGTGATTAAGGATTTGGTAGTGGATATGACTAATTTTTATAATCAGTATAAGTCTATTGAGCCTTGGCTGAAGAGAAAAACACCTGCGCCAACGCCTGGAAAGGAGATACCTCAGAGCAAGAGCGATAAGGCTAAGTTGGATGGGATGTACGAGTGTATTCTCTGTGCTTGTTGTAGTACATCATGCCCTAGCTACTGGTGGAATCCTGAGTCTTATCTTGGTCCTGCTGCACTACTCCATGCCAATAG : ATGGATCATGGATAGCCGTGATGAACATACTCTGGAGCGCCTGGACGCAGTTAATGATGAATTCAAGCTTTATCGCTGCCACACTATTTTGAACTGTTCTCGTGCTTGCCCAAAGGGATTTAATCCTGGCAAGCTCAGAACATCAAGCGCCTGGAGATGGCGCCTTGAGCCTGCACTCTGCAGTGTAGTGTACCAGTCTATTCTGCTAACATTGATTTTGGAGGACCAGTAGGAGGTAGTTCTCAAAATAATTTATGCACAGATCGTAATTTGCTTTCTGAGATTTTTTTTTGGTGCTAGGGTGTTGCCCTTCCCCGAGCCCTGTGTGAATATGGGATTCTTTTGTGCACCGTGCTGCCTTATTCGAGATGAAAGGTGCATCTCACCTGAAATATTGTACTAACAATTAGTATGATAGCTGAAGTGAAGCAAACATGTAATAGCAGAGAGTATATACAAATTTATGAACTGATTTATCATAGAAAATAATGATTTCTATAAATATTCGTTTGAAATTATACCTCATAAAAACTTCATCAATTATATAAAACATTTCTTATATTATCGATGGTAG</gDNA_template>
            <first_frame> F  N  P  T  S  Y  L  *  G  S  V  I  F  A  G  G  E  A  T  C  C  P  S  S  R  F  G  H  Q  I  P  A  G  P  T  S  S  R  F  K  F  T  D  G  I  Q  I  T  Q  G  N  P  S  S  K  N  T  K  L  I  *  R  N  V  A  L  W  S  *  T  P  *  S  K  S  R  M  K  L  T  L  H  Q  P  S  E  D  L  A  E  K  G  S  V  G  P  V  P  *  T  S  T  A  V  M  D  S  L  V  *  Q  R  S  H  R  I  L  Y  R  R  L  R  H  C  H  I  C  L  *  L  R  I  W  *  W  I  *  L  I  F  I  I  S  I  S  L  L  S  L  G  *  R  E  K  H  L  R  Q  R  L  E  R  R  Y  L  R  A  R  A  I  R  L  S  W  M  G  C  T  S  V  F  S  V  L  V  V  V  H  H  A  L  A  T  G  G  I  L  S  L  I  L  V  L  L  H  Y  S  M  P  I   : D  G  S  W  I  A  V  M  N  I  L  W  S  A  W  T  Q  L  M  M  N  S  S  F  I  A  A  T  L  F  *  T  V  L  V  L  A  Q  R  D  L  I  L  A  S  S  E  H  Q  A  P  G  D  G  A  L  S  L  H  S  A  V  *  C  T  S  L  F  C  *  H  *  F  W  R  T  S  R  R  *  F  S  K  *  F  M  H  R  S  *  F  A  F  *  D  F  F  L  V  L  G  C  C  P  S  P  S  P  V  *  I  W  D  S  F  V  H  R  A  A  L  F  E  M  K  G  A  S  H  L  K  Y  C  T  N  N  *  Y  D  S  *  S  E  A  N  M  *  *  Q  R  V  Y  T  N  L  *  T  D  L  S  *  K  I  M  I  S  I  N  I  R  L  K  L  Y  L  I  K  T  S  S  I  I  *  N  I  S  Y  I  I  D  G   </first_frame>
            <second_frame>  L  I  R  R  A  I  Y  R  V  Q  S  S  S  P  A  A  R  L  L  V  A  R  A  H  A  S  D  T  K  S  Q  Q  V  Q  P  Q  V  V  S  N  L  P  M  E  S  R  *  P  R  E  T  R  A  P  R  I  Q  N  *  S  E  G  M  W  P  Y  G  L  R  R  P  N  Q  N  Q  E  *  S  *  P  F  T  N  L  Q  K  I  L  Q  R  R  D  L  W  V  L  C  H  E  H  R  R  L  *  W  T  R  L  F  D  K  D  L  I  G  F  C  I  D  D  Y  A  T  A  T  Y  V  C  D  *  G  F  G  S  G  Y  D  *  F  L  *  S  V  *  V  Y  *  A  L  A  E  E  K  N  T  C  A  N  A  W  K  G  D  T  S  E  Q  E  R  *  G  *  V  G  W  D  V  R  V  Y  S  L  C  L  L  *  Y  I  M  P  *  L  L  V  E  S  *  V  L  S  W  S  C  C  T  T  P  C  Q  *  :  M  D  H  G  *  P  *  *  T  Y  S  G  A  P  G  R  S  *  *  *  I  Q  A  L  S  L  P  H  Y  F  E  L  F  S  C  L  P  K  G  I  *  S  W  Q  A  Q  N  I  K  R  L  E  M  A  P  *  A  C  T  L  Q  C  S  V  P  V  Y  S  A  N  I  D  F  G  G  P  V  G  G  S  S  Q  N  N  L  C  T  D  R  N  L  L  S  E  I  F  F  W  C  *  G  V  A  L  P  R  A  L  C  E  Y  G  I  L  L  C  T  V  L  P  Y  S  R  *  K  V  H  L  T  *  N  I  V  L  T  I  S  M  I  A  E  V  K  Q  T  C  N  S  R  E  Y  I  Q  I  Y  E  L  I  Y  H  R  K  *  *  F  L  *  I  F  V  *  N  Y  T  S  *  K  L  H  Q  L  Y  K  T  F  L  I  L  S  M  V  </second_frame>
            <third_frame>   *  S  D  E  L  F  I  G  F  S  H  L  R  R  R  R  G  Y  L  L  P  E  L  T  L  R  T  P  N  P  S  R  S  N  L  K  S  F  Q  I  Y  R  W  N  P  D  N  P  G  K  P  E  L  Q  E  Y  K  I  D  L  K  E  C  G  P  M  V  L  D  A  L  I  K  I  K  N  E  V  D  P  S  P  T  F  R  R  S  C  R  E  G  I  C  G  S  C  A  M  N  I  D  G  C  N  G  L  A  C  L  T  K  I  S  S  D  S  V  S  T  I  T  P  L  P  H  M  F  V  I  K  D  L  V  V  D  M  T  N  F  Y  N  Q  Y  K  S  I  E  P  W  L  K  R  K  T  P  A  P  T  P  G  K  E  I  P  Q  S  K  S  D  K  A  K  L  D  G  M  Y  E  C  I  L  C  A  C  C  S  T  S  C  P  S  Y  W  W  N  P  E  S  Y  L  G  P  A  A  L  L  H  A  N  R :   W  I  M  D  S  R  D  E  H  T  L  E  R  L  D  A  V  N  D  E  F  K  L  Y  R  C  H  T  I  L  N  C  S  R  A  C  P  K  G  F  N  P  G  K  L  R  T  S  S  A  W  R  W  R  L  E  P  A  L  C  S  V  V  Y  Q  S  I  L  L  T  L  I  L  E  D  Q  *  E  V  V  L  K  I  I  Y  A  Q  I  V  I  C  F  L  R  F  F  F  G  A  R  V  L  P  F  P  E  P  C  V  N  M  G  F  F  C  A  P  C  C  L  I  R  D  E  R  C  I  S  P  E  I  L  Y  *  Q  L  V  *  *  L  K  *  S  K  H  V  I  A  E  S  I  Y  K  F  M  N  *  F  I  I  E  N  N  D  F  Y  K  Y  S  F  E  I  I  P  H  K  N  F  I  N  Y  I  K  H  F  L  Y  Y  R  W  * </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C00HBa0203P08.2" strand="+"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="27548" stop="28173"/>
                    <exon start="29547" stop="29778"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>855</number_coding_nucleotides>
                  <number_encoded_amino_acids>285</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SDELFIGFSHLRRRRGYLLPELTLRTPNPSRSNLKSFQIYRWNPDNPGKPELQEYKIDLKECGPMVLDALIKIKNEVDPSPTFRRSCREGICGSCAMNIDGCNGLACLTKISSDSVSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKTPAPTPGKEIPQSKSDKAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWIMDSRDEHTLERLDAVNDEFKLYRCHTILNCSRACPKGFNPGKLRTSSAWRWRLEPALCSVVYQSILLTLILEDQ*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="-" PGL_start="32522" PGL_stop="31109"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="32522" e_stop="31109"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="32522" e_stop="31109" e_length="1414"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32522" stop="31725"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U325304" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31763" stop="31109"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U330312" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTTATAATATAATCTATATAAATTAATACCATTCAAATGCATGCATTGTTAAATTAAAGTAGTCCCCACCATCTTCACTCTTCCCAAGTAGTAACAGAGAAGCCCAACTTTATTTTTCTCCGTAATAATCATTTGAAAGGCTTAAAAAAGCTCCACGCTGCTAAAAAAAAAGCCGGCTTTATTTGCGCCCCAATAGTATTCTTGACTTACAAACAAGGAACGAACAATTTTCTATTGTCGCCTGCAAGCTTATTCCTACATCCCATTTGTCTCCCTCTTTATATAACTGTTCCTCTTTTTTAACTATATTATTCTATATCGACCTCGATCAACAAGAACAAGAGCAAGAAAAAATGATGAAAATTACTAGGGAAAGCGAAGAAATTGTTCTCCTCGAAGAACAATACGATGAATTAGAAGACGAATATGATGAAGAAGCATTATCACTGTGTGATCTTCCGAACAATGAAGAGGACGAAAAGAAGGAAGAAGTTTCTAGAAGTACTAGCGTAGAAGGCGGACAATTAGAAGATTTTGATTTTAGCTCTTCTGGTGGTAATTTGTTGAAAGAATCAGAGATGTGTACGGCAGATGAAATTTTCTACAAAGGCCAAATATTACCGTTGCGTCATTCAATTAGTTTGCCAAGTGATCGGCGCAATTGTCATGATACAAATTCAAGCAGTAGAAGTAGCAGTATTCGAAGCCAACGTTCATCTAGCAGTGGCAGTTCATCTAATTTCAACACGAAATATCAGCCTAAAATTCGAAATCAATTTCATTCTCATCCTAGTCCAACACCTCAGGTTCGATTTTCTAAAGTTAGTTTTCAATCAAATGTCAACAATTCCACACGAAAATCAGCATTGTGGAGTCTATTTCGCGTTGGCCTAGTTACACCACCAGAAATTGCATTACAAGATCTGAAAAACAGAGGAAACAGGGATATTTCAGGAAGTCGAAATAGCACGAGCAGTAGTAGCAGCGGGAGCTTCGGCAATAATGATAATAAGATGAGAATTAAGAAAACGAAACAGAGGTTTTCTCTAGGCAGCTGTAAATGTTCAGCAAATGTGGTAGAAACAGTTCCAATCGTGAACAGTAGAAGTACAATTAAGAAAATAAGAAAAGCCACAGGGGACCATGAACATGAAGATAAGAAGGATTCATCAGAGAATATCAAATCGACAAAAAAGCAAGCAATGTCACGTCATCGAACGTTTGAGTGGTTAAAGCAACTTTCACTAGAAGGTCCATCAGATGAAACATAAAGATTTCAAAGTATCACGCATGCTTAGCTTCTTTTTTTTCTTCTTTTTTTCATGTAATGTAATGTAACTTTTTTTTTTTTTTGAGTAGTGGAATCATGAAGTTGATTAATTGAAGTAATTGAGGACGCAATTATAATGGTAGC</gDNA_template>
            <first_frame> F  I  I  *  S  I  *  I  N  T  I  Q  M  H  A  L  L  N  *  S  S  P  H  H  L  H  S  S  Q  V  V  T  E  K  P  N  F  I  F  L  R  N  N  H  L  K  G  L  K  K  L  H  A  A  K  K  K  A  G  F  I  C  A  P  I  V  F  L  T  Y  K  Q  G  T  N  N  F  L  L  S  P  A  S  L  F  L  H  P  I  C  L  P  L  Y  I  T  V  P  L  F  *  L  Y  Y  S  I  S  T  S  I  N  K  N  K  S  K  K  K  *  *  K  L  L  G  K  A  K  K  L  F  S  S  K  N  N  T  M  N  *  K  T  N  M  M  K  K  H  Y  H  C  V  I  F  R  T  M  K  R  T  K  R  R  K  K  F  L  E  V  L  A  *  K  A  D  N  *  K  I  L  I  L  A  L  L  V  V  I  C  *  K  N  Q  R  C  V  R  Q  M  K  F  S  T  K  A  K  Y  Y  R  C  V  I  Q  L  V  C  Q  V  I  G  A  I  V  M  I  Q  I  Q  A  V  E  V  A  V  F  E  A  N  V  H  L  A  V  A  V  H  L  I  S  T  R  N  I  S  L  K  F  E  I  N  F  I  L  I  L  V  Q  H  L  R  F  D  F  L  K  L  V  F  N  Q  M  S  T  I  P  H  E  N  Q  H  C  G  V  Y  F  A  L  A  *  L  H  H  Q  K  L  H  Y  K  I  *  K  T  E  E  T  G  I  F  Q  E  V  E  I  A  R  A  V  V  A  A  G  A  S  A  I  M  I  I  R  *  E  L  R  K  R  N  R  G  F  L  *  A  A  V  N  V  Q  Q  M  W  *  K  Q  F  Q  S  *  T  V  E  V  Q  L  R  K  *  E  K  P  Q  G  T  M  N  M  K  I  R  R  I  H  Q  R  I  S  N  R  Q  K  S  K  Q  C  H  V  I  E  R  L  S  G  *  S  N  F  H  *  K  V  H  Q  M  K  H  K  D  F  K  V  S  R  M  L  S  F  F  F  F  F  F  F  S  C  N  V  M  *  L  F  F  F  F  E  *  W  N  H  E  V  D  *  L  K  *  L  R  T  Q  L  *  W  *  </first_frame>
            <second_frame>  L  *  Y  N  L  Y  K  L  I  P  F  K  C  M  H  C  *  I  K  V  V  P  T  I  F  T  L  P  K  *  *  Q  R  S  P  T  L  F  F  S  V  I  I  I  *  K  A  *  K  S  S  T  L  L  K  K  K  P  A  L  F  A  P  Q  *  Y  S  *  L  T  N  K  E  R  T  I  F  Y  C  R  L  Q  A  Y  S  Y  I  P  F  V  S  L  F  I  *  L  F  L  F  F  N  Y  I  I  L  Y  R  P  R  S  T  R  T  R  A  R  K  N  D  E  N  Y  *  G  K  R  R  N  C  S  P  R  R  T  I  R  *  I  R  R  R  I  *  *  R  S  I  I  T  V  *  S  S  E  Q  *  R  G  R  K  E  G  R  S  F  *  K  Y  *  R  R  R  R  T  I  R  R  F  *  F  *  L  F  W  W  *  F  V  E  R  I  R  D  V  Y  G  R  *  N  F  L  Q  R  P  N  I  T  V  A  S  F  N  *  F  A  K  *  S  A  Q  L  S  *  Y  K  F  K  Q  *  K  *  Q  Y  S  K  P  T  F  I  *  Q  W  Q  F  I  *  F  Q  H  E  I  S  A  *  N  S  K  S  I  S  F  S  S  *  S  N  T  S  G  S  I  F  *  S  *  F  S  I  K  C  Q  Q  F  H  T  K  I  S  I  V  E  S  I  S  R  W  P  S  Y  T  T  R  N  C  I  T  R  S  E  K  Q  R  K  Q  G  Y  F  R  K  S  K  *  H  E  Q  *  *  Q  R  E  L  R  Q  *  *  *  *  D  E  N  *  E  N  E  T  E  V  F  S  R  Q  L  *  M  F  S  K  C  G  R  N  S  S  N  R  E  Q  *  K  Y  N  *  E  N  K  K  S  H  R  G  P  *  T  *  R  *  E  G  F  I  R  E  Y  Q  I  D  K  K  A  S  N  V  T  S  S  N  V  *  V  V  K  A  T  F  T  R  R  S  I  R  *  N  I  K  I  S  K  Y  H  A  C  L  A  S  F  F  S  S  F  F  H  V  M  *  C  N  F  F  F  F  L  S  S  G  I  M  K  L  I  N  *  S  N  *  G  R  N  Y  N  G  S </second_frame>
            <third_frame>   Y  N  I  I  Y  I  N  *  Y  H  S  N  A  C  I  V  K  L  K  *  S  P  P  S  S  L  F  P  S  S  N  R  E  A  Q  L  Y  F  S  P  *  *  S  F  E  R  L  K  K  A  P  R  C  *  K  K  S  R  L  Y  L  R  P  N  S  I  L  D  L  Q  T  R  N  E  Q  F  S  I  V  A  C  K  L  I  P  T  S  H  L  S  P  S  L  Y  N  C  S  S  F  L  T  I  L  F  Y  I  D  L  D  Q  Q  E  Q  E  Q  E  K  M  M  K  I  T  R  E  S  E  E  I  V  L  L  E  E  Q  Y  D  E  L  E  D  E  Y  D  E  E  A  L  S  L  C  D  L  P  N  N  E  E  D  E  K  K  E  E  V  S  R  S  T  S  V  E  G  G  Q  L  E  D  F  D  F  S  S  S  G  G  N  L  L  K  E  S  E  M  C  T  A  D  E  I  F  Y  K  G  Q  I  L  P  L  R  H  S  I  S  L  P  S  D  R  R  N  C  H  D  T  N  S  S  S  R  S  S  S  I  R  S  Q  R  S  S  S  S  G  S  S  S  N  F  N  T  K  Y  Q  P  K  I  R  N  Q  F  H  S  H  P  S  P  T  P  Q  V  R  F  S  K  V  S  F  Q  S  N  V  N  N  S  T  R  K  S  A  L  W  S  L  F  R  V  G  L  V  T  P  P  E  I  A  L  Q  D  L  K  N  R  G  N  R  D  I  S  G  S  R  N  S  T  S  S  S  S  S  G  S  F  G  N  N  D  N  K  M  R  I  K  K  T  K  Q  R  F  S  L  G  S  C  K  C  S  A  N  V  V  E  T  V  P  I  V  N  S  R  S  T  I  K  K  I  R  K  A  T  G  D  H  E  H  E  D  K  K  D  S  S  E  N  I  K  S  T  K  K  Q  A  M  S  R  H  R  T  F  E  W  L  K  Q  L  S  L  E  G  P  S  D  E  T  *  R  F  Q  S  I  T  H  A  *  L  L  F  F  L  L  F  F  M  *  C  N  V  T  F  F  F  F  *  V  V  E  S  *  S  *  L  I  E  V  I  E  D  A  I  I  M  V   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C00HBa0203P08.2" strand="-"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="32358" stop="31252"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1104</number_coding_nucleotides>
                  <number_encoded_amino_acids>368</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KKSRLYLRPNSILDLQTRNEQFSIVACKLIPTSHLSPSLYNCSSFLTILFYIDLDQQEQEQEKMMKITRESEEIVLLEEQYDELEDEYDEEALSLCDLPNNEEDEKKEEVSRSTSVEGGQLEDFDFSSSGGNLLKESEMCTADEIFYKGQILPLRHSISLPSDRRNCHDTNSSSRSSSIRSQRSSSSGSSSNFNTKYQPKIRNQFHSHPSPTPQVRFSKVSFQSNVNNSTRKSALWSLFRVGLVTPPEIALQDLKNRGNRDISGSRNSTSSSSSGSFGNNDNKMRIKKTKQRFSLGSCKCSANVVETVPIVNSRSTIKKIRKATGDHEHEDKKDSSENIKSTKKQAMSRHRTFEWLKQLSLEGPSDET*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="-" PGL_start="36023" PGL_stop="35530"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="36023" e_stop="35530"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.992"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.992">
            <gDNA_exon_boundary e_start="36023" e_stop="35530" e_length="494"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36023" stop="35530"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U314575" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TAATATTAATATAACAGAGAGGAGAAAGAAAAGAAATGGAAAAGCAAAGAGATAGTAATAAGGGATGTATAGATGAGAGAAAACTAGAAGGATTGCCAGTGGATACAAGTCCATATACACAGTATAAGGATTTGGAGGATTACAAGCAACAGGGTTATGGAACACAAGGCCATCAACAGCCCAATCCTGGGCGTGGTGCTGCCAGTTCCACCGACGCCCCAACCCTCGCAGGTGGTGGATCTGCTGAAGCTCAGCTTTCTGCTACTGACAACATCAATCGCCAGGGTGTTCCTTAATTAATTTCGTTAATTTTTAGTCGCATTTACAACAGTTATTCCTTTTTTTTACTTGGGTAAAATACGTATATGTAGAATAATAACAATAAGAACGTTCTGAATTAGTGATTCTAGATCTTAGATTCGTCCCTGTTTGGTGTTGTTTGTATGTTCCTTCCGTCGGCTTGTAACTTAATAAATATATTTTTCTAAAAATAA</gDNA_template>
            <first_frame> *  Y  *  Y  N  R  E  E  K  E  K  K  W  K  S  K  E  I  V  I  R  D  V  *  M  R  E  N  *  K  D  C  Q  W  I  Q  V  H  I  H  S  I  R  I  W  R  I  T  S  N  R  V  M  E  H  K  A  I  N  S  P  I  L  G  V  V  L  P  V  P  P  T  P  Q  P  S  Q  V  V  D  L  L  K  L  S  F  L  L  L  T  T  S  I  A  R  V  F  L  N  *  F  R  *  F  L  V  A  F  T  T  V  I  P  F  F  Y  L  G  K  I  R  I  C  R  I  I  T  I  R  T  F  *  I  S  D  S  R  S  *  I  R  P  C  L  V  L  F  V  C  S  F  R  R  L  V  T  *  *  I  Y  F  S  K  N   </first_frame>
            <second_frame>  N  I  N  I  T  E  R  R  K  K  R  N  G  K  A  K  R  *  *  *  G  M  Y  R  *  E  K  T  R  R  I  A  S  G  Y  K  S  I  Y  T  V  *  G  F  G  G  L  Q  A  T  G  L  W  N  T  R  P  S  T  A  Q  S  W  A  W  C  C  Q  F  H  R  R  P  N  P  R  R  W  W  I  C  *  S  S  A  F  C  Y  *  Q  H  Q  S  P  G  C  S  L  I  N  F  V  N  F  *  S  H  L  Q  Q  L  F  L  F  F  T  W  V  K  Y  V  Y  V  E  *  *  Q  *  E  R  S  E  L  V  I  L  D  L  R  F  V  P  V  W  C  C  L  Y  V  P  S  V  G  L  *  L  N  K  Y  I  F  L  K  I  </second_frame>
            <third_frame>   I  L  I  *  Q  R  G  E  R  K  E  M  E  K  Q  R  D  S  N  K  G  C  I  D  E  R  K  L  E  G  L  P  V  D  T  S  P  Y  T  Q  Y  K  D  L  E  D  Y  K  Q  Q  G  Y  G  T  Q  G  H  Q  Q  P  N  P  G  R  G  A  A  S  S  T  D  A  P  T  L  A  G  G  G  S  A  E  A  Q  L  S  A  T  D  N  I  N  R  Q  G  V  P  *  L  I  S  L  I  F  S  R  I  Y  N  S  Y  S  F  F  L  L  G  *  N  T  Y  M  *  N  N  N  N  K  N  V  L  N  *  *  F  *  I  L  D  S  S  L  F  G  V  V  C  M  F  L  P  S  A  C  N  L  I  N  I  F  F  *  K  * </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C00HBa0203P08.2" strand="-"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="36009" stop="35728"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>279</number_coding_nucleotides>
                  <number_encoded_amino_acids>93</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QRGERKEMEKQRDSNKGCIDERKLEGLPVDTSPYTQYKDLEDYKQQGYGTQGHQQPNPGRGAASSTDAPTLAGGGSAEAQLSATDNINRQGVP*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C00HBa0203P08.2" strand="-"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="35936" stop="35724"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>210</number_coding_nucleotides>
                  <number_encoded_amino_acids>70</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KDCQWIQVHIHSIRIWRITSNRVMEHKAINSPILGVVLPVPPTPQPSQVVDLLKLSFLLLTTSIARVFLN*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="-" PGL_start="41575" PGL_stop="36336"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="41575" e_stop="41440"/>
            <exon e_start="41369" e_stop="41253"/>
            <exon e_start="40365" e_stop="40208"/>
            <exon e_start="39843" e_stop="39741"/>
            <exon e_start="38549" e_stop="38454"/>
            <exon e_start="37836" e_stop="37771"/>
            <exon e_start="37681" e_stop="37562"/>
            <exon e_start="36736" e_stop="36336"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.983" acc_prob="0.637" e_score="0.993"/>
          <exon-intron don_prob="0.998" acc_prob="0.949" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.967" e_score="1.000"/>
          <exon-intron don_prob="0.952" acc_prob="0.968" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.383" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.942" e_score="0.970"/>
          <exon-intron don_prob="0.879" acc_prob="0.890" e_score="1.000"/>
          <exon-only e_score="0.980"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.993">
            <gDNA_exon_boundary e_start="41575" e_stop="41440" e_length="136"/>
          </exon>
          <intron i_serial="1" don_prob="0.983" acc_prob="0.637">
            <gDNA_intron_boundary i_start="41439" i_stop="41370" i_length="70"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="41369" e_stop="41253" e_length="117"/>
          </exon>
          <intron i_serial="2" don_prob="0.998" acc_prob="0.949">
            <gDNA_intron_boundary i_start="41252" i_stop="40366" i_length="887"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="40365" e_stop="40208" e_length="158"/>
          </exon>
          <intron i_serial="3" don_prob="0.997" acc_prob="0.967">
            <gDNA_intron_boundary i_start="40207" i_stop="39844" i_length="364"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="39843" e_stop="39741" e_length="103"/>
          </exon>
          <intron i_serial="4" don_prob="0.952" acc_prob="0.968">
            <gDNA_intron_boundary i_start="39740" i_stop="38550" i_length="1191"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="38549" e_stop="38454" e_length="96"/>
          </exon>
          <intron i_serial="5" don_prob="0.995" acc_prob="0.383">
            <gDNA_intron_boundary i_start="38453" i_stop="37837" i_length="617"/>
          </intron>
          <exon e_serial="6" e_score="0.970">
            <gDNA_exon_boundary e_start="37836" e_stop="37771" e_length="66"/>
          </exon>
          <intron i_serial="6" don_prob="0.998" acc_prob="0.942">
            <gDNA_intron_boundary i_start="37770" i_stop="37682" i_length="89"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="37681" e_stop="37562" e_length="120"/>
          </exon>
          <intron i_serial="7" don_prob="0.879" acc_prob="0.890">
            <gDNA_intron_boundary i_start="37561" i_stop="36737" i_length="825"/>
          </intron>
          <exon e_serial="8" e_score="0.980">
            <gDNA_exon_boundary e_start="36736" e_stop="36336" e_length="401"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="41575" stop="41440"/>
              <exon start="41369" stop="41253"/>
              <exon start="40365" stop="40208"/>
              <exon start="39843" stop="39741"/>
              <exon start="38549" stop="38454"/>
              <exon start="37836" stop="37771"/>
              <exon start="37681" stop="37562"/>
              <exon start="36736" stop="36336"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U324765" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CAGGAAGAAGATGAAGAGCAAAGGTAGATTAGTGGGACAAAGATGGCGGAGCATAGGGGGCTTACCTTCAATATTTCTGCTATGTCTTTTCTTGTTCTTCGCCGGTTTATTCGGTTCTACTCTCGTTTCTCATCAG : GATGTACAACTACTTACTGTACGGCCTAGGTCAAGGGTGCTTAAATCTGTGGAAGAATTTGATGTTTTGCCTAATGGCGACACTGGAGAACACTCCCTTACTTCCATCCCCTTCCAG : GTCTTAAGCTGGTTCCCACGTGCATTATACTTTCCCAATTTCGCAACTACAGAACAATGCCAAGGCATAATTAAGATGGCAAAGGCAGAACTGAAACCATCATCTTTGGCTCTCCGCAAAGGAGAAACAGCAGAAAATACCAAAGGAGTTAGAACAAG : TTCTGGTATGTTTATCAGTGCATCTGAAGACAAAACTGGAATTCTGGACCTCATTGAGGAGAAAATCGCAAAGGCGACTATGATCCCCAGGACACACGGAGAG : GCATTTAATGTTTTGCGGTACGAAATAGGCCAGAGTTATTATTCACATTATGATGCGTTTGATCCTTCTCAATATGGTCCTCAGAAGAGCCAAAGG : GTTGCATCCTTTTTGTTATATTTATCTGATGTGGAAGAAGGTGGAGAAACCATGTTCCCTTTCGAG : AATGCACAGAATATGGATGTTAATTATGACTTCCGCAAGTGTATTGGTCTGAAAGTGAAGCCGCGTAGAGGGGATGGACTACTATTTTACTCGCTGTTTCCAAATGGTACAATTGATCCG : ACATCTCTTCACGGGAGCTGTGCAGTAATCCGAGGTGAAAAATGGGTTGCCACAAAGTGGATCAGGGATCAAGAAATGGATGAATAAACGAGTACATGTCTGGAAGTGGTGTTAATATAATTCTTTCGTAATTTAATGTAGCCACTCACTGGAACCTTTGAGCGAATTTTACAGTAAATATATCTAGTGTTTGTTCATATTGATCTGTGTCAGTTAACCCTTAATACGTTACTTGAGTCTTGGTTGCTCCCATTACCCACAAAGCTCACCCCATCTTGCAGTAAAAAAGAAGTCTAATTGTAATGACCGTGCGAATGTTTTGTAATAGGATCAGATCACGTGTTTCAAAAGTGTTGTACTAACACAAATATTATTATGACGCTAAAAAGAATGTGTATAGA</gDNA_template>
            <first_frame> Q  E  E  D  E  E  Q  R  *  I  S  G  T  K  M  A  E  H  R  G  L  T  F  N  I  S  A  M  S  F  L  V  L  R  R  F  I  R  F  Y  S  R  F  S  S   : G  C  T  T  T  Y  C  T  A  *  V  K  G  A  *  I  C  G  R  I  *  C  F  A  *  W  R  H  W  R  T  L  P  Y  F  H  P  L  P   : G  L  K  L  V  P  T  C  I  I  L  S  Q  F  R  N  Y  R  T  M  P  R  H  N  *  D  G  K  G  R  T  E  T  I  I  F  G  S  P  Q  R  R  N  S  R  K  Y  Q  R  S  *  N  K  :  F  W  Y  V  Y  Q  C  I  *  R  Q  N  W  N  S  G  P  H  *  G  E  N  R  K  G  D  Y  D  P  Q  D  T  R  R   : G  I  *  C  F  A  V  R  N  R  P  E  L  L  F  T  L  *  C  V  *  S  F  S  I  W  S  S  E  E  P  K   : G  C  I  L  F  V  I  F  I  *  C  G  R  R  W  R  N  H  V  P  F  R   : E  C  T  E  Y  G  C  *  L  *  L  P  Q  V  Y  W  S  E  S  E  A  A  *  R  G  W  T  T  I  L  L  A  V  S  K  W  Y  N  *  S   : D  I  S  S  R  E  L  C  S  N  P  R  *  K  M  G  C  H  K  V  D  Q  G  S  R  N  G  *  I  N  E  Y  M  S  G  S  G  V  N  I  I  L  S  *  F  N  V  A  T  H  W  N  L  *  A  N  F  T  V  N  I  S  S  V  C  S  Y  *  S  V  S  V  N  P  *  Y  V  T  *  V  L  V  A  P  I  T  H  K  A  H  P  I  L  Q  *  K  R  S  L  I  V  M  T  V  R  M  F  C  N  R  I  R  S  R  V  S  K  V  L  Y  *  H  K  Y  Y  Y  D  A  K  K  N  V  Y  R </first_frame>
            <second_frame>  R  K  K  M  K  S  K  G  R  L  V  G  Q  R  W  R  S  I  G  G  L  P  S  I  F  L  L  C  L  F  L  F  F  A  G  L  F  G  S  T  L  V  S  H  Q  :  D  V  Q  L  L  T  V  R  P  R  S  R  V  L  K  S  V  E  E  F  D  V  L  P  N  G  D  T  G  E  H  S  L  T  S  I  P  F  Q  :  V  L  S  W  F  P  R  A  L  Y  F  P  N  F  A  T  T  E  Q  C  Q  G  I  I  K  M  A  K  A  E  L  K  P  S  S  L  A  L  R  K  G  E  T  A  E  N  T  K  G  V  R  T  S :   S  G  M  F  I  S  A  S  E  D  K  T  G  I  L  D  L  I  E  E  K  I  A  K  A  T  M  I  P  R  T  H  G  E  :  A  F  N  V  L  R  Y  E  I  G  Q  S  Y  Y  S  H  Y  D  A  F  D  P  S  Q  Y  G  P  Q  K  S  Q  R  :  V  A  S  F  L  L  Y  L  S  D  V  E  E  G  G  E  T  M  F  P  F  E  :  N  A  Q  N  M  D  V  N  Y  D  F  R  K  C  I  G  L  K  V  K  P  R  R  G  D  G  L  L  F  Y  S  L  F  P  N  G  T  I  D  P  :  T  S  L  H  G  S  C  A  V  I  R  G  E  K  W  V  A  T  K  W  I  R  D  Q  E  M  D  E  *  T  S  T  C  L  E  V  V  L  I  *  F  F  R  N  L  M  *  P  L  T  G  T  F  E  R  I  L  Q  *  I  Y  L  V  F  V  H  I  D  L  C  Q  L  T  L  N  T  L  L  E  S  W  L  L  P  L  P  T  K  L  T  P  S  C  S  K  K  E  V  *  L  *  *  P  C  E  C  F  V  I  G  S  D  H  V  F  Q  K  C  C  T  N  T  N  I  I  M  T  L  K  R  M  C  I   </second_frame>
            <third_frame>   G  R  R  *  R  A  K  V  D  *  W  D  K  D  G  G  A  *  G  A  Y  L  Q  Y  F  C  Y  V  F  S  C  S  S  P  V  Y  S  V  L  L  S  F  L  I  R :   M  Y  N  Y  L  L  Y  G  L  G  Q  G  C  L  N  L  W  K  N  L  M  F  C  L  M  A  T  L  E  N  T  P  L  L  P  S  P  S  R :   S  *  A  G  S  H  V  H  Y  T  F  P  I  S  Q  L  Q  N  N  A  K  A  *  L  R  W  Q  R  Q  N  *  N  H  H  L  W  L  S  A  K  E  K  Q  Q  K  I  P  K  E  L  E  Q   : V  L  V  C  L  S  V  H  L  K  T  K  L  E  F  W  T  S  L  R  R  K  S  Q  R  R  L  *  S  P  G  H  T  E  R :   H  L  M  F  C  G  T  K  *  A  R  V  I  I  H  I  M  M  R  L  I  L  L  N  M  V  L  R  R  A  K  G :   L  H  P  F  C  Y  I  Y  L  M  W  K  K  V  E  K  P  C  S  L  S  R :   M  H  R  I  W  M  L  I  M  T  S  A  S  V  L  V  *  K  *  S  R  V  E  G  M  D  Y  Y  F  T  R  C  F  Q  M  V  Q  L  I  R :   H  L  F  T  G  A  V  Q  *  S  E  V  K  N  G  L  P  Q  S  G  S  G  I  K  K  W  M  N  K  R  V  H  V  W  K  W  C  *  Y  N  S  F  V  I  *  C  S  H  S  L  E  P  L  S  E  F  Y  S  K  Y  I  *  C  L  F  I  L  I  C  V  S  *  P  L  I  R  Y  L  S  L  G  C  S  H  Y  P  Q  S  S  P  H  L  A  V  K  K  K  S  N  C  N  D  R  A  N  V  L  *  *  D  Q  I  T  C  F  K  S  V  V  L  T  Q  I  L  L  *  R  *  K  E  C  V  *  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C00HBa0203P08.2" strand="-"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="41574" stop="41440"/>
                    <exon start="41369" stop="41253"/>
                    <exon start="40365" stop="40208"/>
                    <exon start="39843" stop="39741"/>
                    <exon start="38549" stop="38454"/>
                    <exon start="37836" stop="37771"/>
                    <exon start="37681" stop="37562"/>
                    <exon start="36736" stop="36650"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>879</number_coding_nucleotides>
                  <number_encoded_amino_acids>293</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RKKMKSKGRLVGQRWRSIGGLPSIFLLCLFLFFAGLFGSTLVSHQDVQLLTVRPRSRVLKSVEEFDVLPNGDTGEHSLTSIPFQVLSWFPRALYFPNFATTEQCQGIIKMAKAELKPSSLALRKGETAENTKGVRTSSGMFISASEDKTGILDLIEEKIAKATMIPRTHGEAFNVLRYEIGQSYYSHYDAFDPSQYGPQKSQRVASFLLYLSDVEEGGETMFPFENAQNMDVNYDFRKCIGLKVKPRRGDGLLFYSLFPNGTIDPTSLHGSCAVIRGEKWVATKWIRDQEMDE*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="+" PGL_start="47273" PGL_stop="50325"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="47273" e_stop="47597"/>
            <exon e_start="48083" e_stop="48235"/>
            <exon e_start="48412" e_stop="48489"/>
            <exon e_start="48658" e_stop="48753"/>
            <exon e_start="49593" e_stop="49628"/>
            <exon e_start="49742" e_stop="49923"/>
            <exon e_start="50001" e_stop="50325"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.996" acc_prob="0.115" e_score="0.991"/>
          <exon-intron don_prob="0.997" acc_prob="0.849" e_score="1.000"/>
          <exon-intron don_prob="0.831" acc_prob="0.341" e_score="1.000"/>
          <exon-intron don_prob="0.990" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.959" acc_prob="0.334" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.996" e_score="1.000"/>
          <exon-only e_score="0.991"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.991">
            <gDNA_exon_boundary e_start="47273" e_stop="47597" e_length="325"/>
          </exon>
          <intron i_serial="1" don_prob="0.996" acc_prob="0.115">
            <gDNA_intron_boundary i_start="47598" i_stop="48082" i_length="485"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="48083" e_stop="48235" e_length="153"/>
          </exon>
          <intron i_serial="2" don_prob="0.997" acc_prob="0.849">
            <gDNA_intron_boundary i_start="48236" i_stop="48411" i_length="176"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="48412" e_stop="48489" e_length="78"/>
          </exon>
          <intron i_serial="3" don_prob="0.831" acc_prob="0.341">
            <gDNA_intron_boundary i_start="48490" i_stop="48657" i_length="168"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="48658" e_stop="48753" e_length="96"/>
          </exon>
          <intron i_serial="4" don_prob="0.990" acc_prob="0.995">
            <gDNA_intron_boundary i_start="48754" i_stop="49592" i_length="839"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="49593" e_stop="49628" e_length="36"/>
          </exon>
          <intron i_serial="5" don_prob="0.959" acc_prob="0.334">
            <gDNA_intron_boundary i_start="49629" i_stop="49741" i_length="113"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="49742" e_stop="49923" e_length="182"/>
          </exon>
          <intron i_serial="6" don_prob="0.998" acc_prob="0.996">
            <gDNA_intron_boundary i_start="49924" i_stop="50000" i_length="77"/>
          </intron>
          <exon e_serial="7" e_score="0.991">
            <gDNA_exon_boundary e_start="50001" e_stop="50325" e_length="325"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47273" stop="47597"/>
              <exon start="48083" stop="48235"/>
              <exon start="48412" stop="48489"/>
              <exon start="48658" stop="48753"/>
              <exon start="49593" stop="49628"/>
              <exon start="49742" stop="49923"/>
              <exon start="50001" stop="50325"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U315914" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AATTTTCCATCACGTATGATGCATGGTCAAAAAAAAAAAAGAACTTCTATCTAGCTACTTTTTCTTCTGAATTCTATGGTTGCAAGAAAATTCACAAATGCTAAGGCTAAATTTATATGGCTCCATAGTTTCTAGTCCGATAGAAGTCAACAAAAGCTGCCGCTCGTGGATCATTTTATCGAACAAAGCAACGATTGTATGTCGGAGGAACATTCGAGTTAAAGCCCTGAAAGATGGGATGAACGGTGGCACGAATGGCAGTGGATTAGGTGGTCGTAGTTGGGACCCAGGCTTGGAAATTGAGGTGCCATTTGAACAAAGGCCG : GTGAATGAGTACTCATCTCTGAAAGATGAAACTTTATACTCTTGGGCAGAACTGGGTCCAGGGGCCTTCTTCCTACGTCTCGGGGGACTTTGGTTAGTCACTTTCGCAGTTTTGGGAGTACCTATTGCTGCTGCAAGCTTCAATCCTTCAAAG : GATCCTTTAAGATTTCTCCTGGCTGCAAGTACGGGGACTCTTTTTCTTGTTGCACTGATTGTCCTAAGAATTTATCTG : GGATGGAGCTATGTTGGAGATAGGCTTTTATCAGCAGTTATACCTTATGAAGAGACTGGATGGTATGATGGGCAGATGTGGGTGAAGCCCCCAGAG : ATCTTAGCTCGGGATAGGCTGTTGGGATCTTATAAG : GTGAAACCAGTCATTAAAATGCTGAAGCAAACGCTAGTTGGAACAGGGGCTTTGCTTGTTGCAGCAGTCTCATTATTCATATTTGCAACACCAGTAGAAGATTTTTTCCGCAATACTTTCACAACAAACGAGAACTCATTGAGTTCCACCTCAACAAACAGCACAAATAAACTAGGCATCAG : GAAAGAAGAACTGTTGCGCTTGCCACTGGAAGTCAAGGAGGACGATGATCTAGCAAAAGCTGCCGCTGAAGCAGCTGATGGAAGGCCAGTTTACTGCAGAGATAGGTATTATCGTGCATTGGCCGGTGGACAGTACTGCAAATGGGAAGACTTAGTTAAATAAGAGGATATATATAAGTGAAGAAAGCTACAGTTAAATTCTGTGATTGCTCAAAAGATCTGTACAATTGAGCCTCTTCTTATAATTTTAACGAAGAAATTTTGATGTTTTATGCATTAGATAATGCGCATGCAAAGAACAAAAGAAAGAGAATCATAACCCAAA</gDNA_template>
            <first_frame> N  F  P  S  R  M  M  H  G  Q  K  K  K  R  T  S  I  *  L  L  F  L  L  N  S  M  V  A  R  K  F  T  N  A  K  A  K  F  I  W  L  H  S  F  *  S  D  R  S  Q  Q  K  L  P  L  V  D  H  F  I  E  Q  S  N  D  C  M  S  E  E  H  S  S  *  S  P  E  R  W  D  E  R  W  H  E  W  Q  W  I  R  W  S  *  L  G  P  R  L  G  N  *  G  A  I  *  T  K  A   : G  E  *  V  L  I  S  E  R  *  N  F  I  L  L  G  R  T  G  S  R  G  L  L  P  T  S  R  G  T  L  V  S  H  F  R  S  F  G  S  T  Y  C  C  C  K  L  Q  S  F  K   : G  S  F  K  I  S  P  G  C  K  Y  G  D  S  F  S  C  C  T  D  C  P  K  N  L  S   : G  M  E  L  C  W  R  *  A  F  I  S  S  Y  T  L  *  R  D  W  M  V  *  W  A  D  V  G  E  A  P  R   : D  L  S  S  G  *  A  V  G  I  L  *   : G  E  T  S  H  *  N  A  E  A  N  A  S  W  N  R  G  F  A  C  C  S  S  L  I  I  H  I  C  N  T  S  R  R  F  F  P  Q  Y  F  H  N  K  R  E  L  I  E  F  H  L  N  K  Q  H  K  *  T  R  H  Q  :  E  R  R  T  V  A  L  A  T  G  S  Q  G  G  R  *  S  S  K  S  C  R  *  S  S  *  W  K  A  S  L  L  Q  R  *  V  L  S  C  I  G  R  W  T  V  L  Q  M  G  R  L  S  *  I  R  G  Y  I  *  V  K  K  A  T  V  K  F  C  D  C  S  K  D  L  Y  N  *  A  S  S  Y  N  F  N  E  E  I  L  M  F  Y  A  L  D  N  A  H  A  K  N  K  R  K  R  I  I  T  Q  </first_frame>
            <second_frame>  I  F  H  H  V  *  C  M  V  K  K  K  K  E  L  L  S  S  Y  F  F  F  *  I  L  W  L  Q  E  N  S  Q  M  L  R  L  N  L  Y  G  S  I  V  S  S  P  I  E  V  N  K  S  C  R  S  W  I  I  L  S  N  K  A  T  I  V  C  R  R  N  I  R  V  K  A  L  K  D  G  M  N  G  G  T  N  G  S  G  L  G  G  R  S  W  D  P  G  L  E  I  E  V  P  F  E  Q  R  P  :  V  N  E  Y  S  S  L  K  D  E  T  L  Y  S  W  A  E  L  G  P  G  A  F  F  L  R  L  G  G  L  W  L  V  T  F  A  V  L  G  V  P  I  A  A  A  S  F  N  P  S  K  :  D  P  L  R  F  L  L  A  A  S  T  G  T  L  F  L  V  A  L  I  V  L  R  I  Y  L  :  G  W  S  Y  V  G  D  R  L  L  S  A  V  I  P  Y  E  E  T  G  W  Y  D  G  Q  M  W  V  K  P  P  E  :  I  L  A  R  D  R  L  L  G  S  Y  K  :  V  K  P  V  I  K  M  L  K  Q  T  L  V  G  T  G  A  L  L  V  A  A  V  S  L  F  I  F  A  T  P  V  E  D  F  F  R  N  T  F  T  T  N  E  N  S  L  S  S  T  S  T  N  S  T  N  K  L  G  I  R :   K  E  E  L  L  R  L  P  L  E  V  K  E  D  D  D  L  A  K  A  A  A  E  A  A  D  G  R  P  V  Y  C  R  D  R  Y  Y  R  A  L  A  G  G  Q  Y  C  K  W  E  D  L  V  K  *  E  D  I  Y  K  *  R  K  L  Q  L  N  S  V  I  A  Q  K  I  C  T  I  E  P  L  L  I  I  L  T  K  K  F  *  C  F  M  H  *  I  M  R  M  Q  R  T  K  E  R  E  S  *  P  K </second_frame>
            <third_frame>   F  S  I  T  Y  D  A  W  S  K  K  K  K  N  F  Y  L  A  T  F  S  S  E  F  Y  G  C  K  K  I  H  K  C  *  G  *  I  Y  M  A  P  *  F  L  V  R  *  K  S  T  K  A  A  A  R  G  S  F  Y  R  T  K  Q  R  L  Y  V  G  G  T  F  E  L  K  P  *  K  M  G  *  T  V  A  R  M  A  V  D  *  V  V  V  V  G  T  Q  A  W  K  L  R  C  H  L  N  K  G  R :   *  M  S  T  H  L  *  K  M  K  L  Y  T  L  G  Q  N  W  V  Q  G  P  S  S  Y  V  S  G  D  F  G  *  S  L  S  Q  F  W  E  Y  L  L  L  L  Q  A  S  I  L  Q  R :   I  L  *  D  F  S  W  L  Q  V  R  G  L  F  F  L  L  H  *  L  S  *  E  F  I  W :   D  G  A  M  L  E  I  G  F  Y  Q  Q  L  Y  L  M  K  R  L  D  G  M  M  G  R  C  G  *  S  P  Q  R :   S  *  L  G  I  G  C  W  D  L  I  R :   *  N  Q  S  L  K  C  *  S  K  R  *  L  E  Q  G  L  C  L  L  Q  Q  S  H  Y  S  Y  L  Q  H  Q  *  K  I  F  S  A  I  L  S  Q  Q  T  R  T  H  *  V  P  P  Q  Q  T  A  Q  I  N  *  A  S   : G  K  K  N  C  C  A  C  H  W  K  S  R  R  T  M  I  *  Q  K  L  P  L  K  Q  L  M  E  G  Q  F  T  A  E  I  G  I  I  V  H  W  P  V  D  S  T  A  N  G  K  T  *  L  N  K  R  I  Y  I  S  E  E  S  Y  S  *  I  L  *  L  L  K  R  S  V  Q  L  S  L  F  L  *  F  *  R  R  N  F  D  V  L  C  I  R  *  C  A  C  K  E  Q  K  K  E  N  H  N  P   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C00HBa0203P08.2" strand="+"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="47343" stop="47597"/>
                    <exon start="48083" stop="48235"/>
                    <exon start="48412" stop="48489"/>
                    <exon start="48658" stop="48753"/>
                    <exon start="49593" stop="49628"/>
                    <exon start="49742" stop="49923"/>
                    <exon start="50001" stop="50163"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>960</number_coding_nucleotides>
                  <number_encoded_amino_acids>320</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ILWLQENSQMLRLNLYGSIVSSPIEVNKSCRSWIILSNKATIVCRRNIRVKALKDGMNGGTNGSGLGGRSWDPGLEIEVPFEQRPVNEYSSLKDETLYSWAELGPGAFFLRLGGLWLVTFAVLGVPIAAASFNPSKDPLRFLLAASTGTLFLVALIVLRIYLGWSYVGDRLLSAVIPYEETGWYDGQMWVKPPEILARDRLLGSYKVKPVIKMLKQTLVGTGALLVAAVSLFIFATPVEDFFRNTFTTNENSLSSTSTNSTNKLGIRKEELLRLPLEVKEDDDLAKAAAEAADGRPVYCRDRYYRALAGGQYCKWEDLVK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="-" PGL_start="55445" PGL_stop="54957"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="55445" e_stop="54957"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.973"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.973">
            <gDNA_exon_boundary e_start="55445" e_stop="54957" e_length="489"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55445" stop="54957"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U341095" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TATCACAACTTTCAAGTTTGGTTTTTTGGTTAGAGTTCGTTAACAGGCAAAAAGAAGCTTAATCCGAATGATGGCAAGAATTATATAGATATATAATGATATTAGTTAGTAAACCAACTACCAAATGTATGCGTAATTTTTTTTTCTTTTTTGTATATTAAGTTGTGGTGCATAGTGTTTCATCCTTAACTAGAGATTTTATGTTCGAGCTCAAGTATGAAAGAAAATTTTGTTGGGAGCATCACCTCGAATGGATCTTACAAAGCGCAATTCAAATTCGATCGAAGCTCCAATACGGATTTTGAACACTTTGGCCGAAAAAAAAAGCTTTTTGGATATTTTCTTTCTTTCTTTGTAGGATACATGCAAGAAAATATGTATCGACAGTTTTCTCTTTATATGTCCTATTGATTGTAGTTACCTTGAAGATTTTGTACAAGGCTCCATTTGGGAATATTTTGCAAATTATCTTATCATGTTTGTTATATA</gDNA_template>
            <first_frame> Y  H  N  F  Q  V  W  F  F  G  *  S  S  L  T  G  K  K  K  L  N  P  N  D  G  K  N  Y  I  D  I  *  *  Y  *  L  V  N  Q  L  P  N  V  C  V  I  F  F  S  F  L  Y  I  K  L  W  C  I  V  F  H  P  *  L  E  I  L  C  S  S  S  S  M  K  E  N  F  V  G  S  I  T  S  N  G  S  Y  K  A  Q  F  K  F  D  R  S  S  N  T  D  F  E  H  F  G  R  K  K  K  L  F  G  Y  F  L  S  F  F  V  G  Y  M  Q  E  N  M  Y  R  Q  F  S  L  Y  M  S  Y  *  L  *  L  P  *  R  F  C  T  R  L  H  L  G  I  F  C  K  L  S  Y  H  V  C  Y  I </first_frame>
            <second_frame>  I  T  T  F  K  F  G  F  L  V  R  V  R  *  Q  A  K  R  S  L  I  R  M  M  A  R  I  I  *  I  Y  N  D  I  S  *  *  T  N  Y  Q  M  Y  A  *  F  F  F  L  F  C  I  L  S  C  G  A  *  C  F  I  L  N  *  R  F  Y  V  R  A  Q  V  *  K  K  I  L  L  G  A  S  P  R  M  D  L  T  K  R  N  S  N  S  I  E  A  P  I  R  I  L  N  T  L  A  E  K  K  S  F  L  D  I  F  F  L  S  L  *  D  T  C  K  K  I  C  I  D  S  F  L  F  I  C  P  I  D  C  S  Y  L  E  D  F  V  Q  G  S  I  W  E  Y  F  A  N  Y  L  I  M  F  V  I   </second_frame>
            <third_frame>   S  Q  L  S  S  L  V  F  W  L  E  F  V  N  R  Q  K  E  A  *  S  E  *  W  Q  E  L  Y  R  Y  I  M  I  L  V  S  K  P  T  T  K  C  M  R  N  F  F  F  F  F  V  Y  *  V  V  V  H  S  V  S  S  L  T  R  D  F  M  F  E  L  K  Y  E  R  K  F  C  W  E  H  H  L  E  W  I  L  Q  S  A  I  Q  I  R  S  K  L  Q  Y  G  F  *  T  L  W  P  K  K  K  A  F  W  I  F  S  F  F  L  C  R  I  H  A  R  K  Y  V  S  T  V  F  S  L  Y  V  L  L  I  V  V  T  L  K  I  L  Y  K  A  P  F  G  N  I  L  Q  I  I  L  S  C  L  L  Y  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C00HBa0203P08.2" strand="-"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="55256" stop="55035"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>219</number_coding_nucleotides>
                  <number_encoded_amino_acids>73</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LEILCSSSSMKENFVGSITSNGSYKAQFKFDRSSNTDFEHFGRKKKLFGYFLSFFVGYMQENMYRQFSLYMSY*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="+" PGL_start="57404" PGL_stop="59074"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="57404" e_stop="59074"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.999"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.999">
            <gDNA_exon_boundary e_start="57404" e_stop="59074" e_length="1671"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="57404" stop="59074"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U317725" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GCCTTTTTGGTTATGCTTCAGGAACTGCTCGTGGAATGGCTTATCGTGCCAGAGTTGCCGTCTACAAGGTTTGCTGGCTTGGGAAATGCTTTGGCCCCGACATATTGGCAGGTATGGACAAAGCCATTGATGATAATGTTAATGTGCTTTCATTATCACTTGGTGGAGAGCATTTTGATTTCTACAGCGACGATGTTGCAATTGGAGCATTTGCTGCAATGGAGAAGGGTATTATGGTTTCTTGCTCTGCTGGAAATGCTGGACCCAATCAATTCAGTTTGGCTAACCAAGCACCTTGGATCACCACCGTGGGTGCCGGAACAGTTGACCGTGATTTTCCAGCATATGTAAGCCTTGGCAATGGTAAAAATTTCTCCGGTGTTTCACTTTACGCGGGTGATCCATTACCCAGTGGGATGCTTCCCTTGGTGTATGCAGGTAATGCCAGCAATGCAACCAATGGAAATCTCTGTATAATGGGAACCTTAATTCCTGAGAAAGTTAAAGGCAAAATTGTGCTGTGTGACGGAGGGGTTAACGTCAGAGCTGAAAAGGGTTATGTGGTAAAATCAGCCGGTGGAGCCGGCATGATTTTTGCTAACACAAATGGGCTGGGGCTACTGGCTGACGCCCATTTACTTCCAGCGGCGGCTGTGGGTCAATTAGATGGCGATGAAATCAAGAAGTATATAACATCAGATCCTAATCCAACGGCCACGATTCTTTTTGGAGGAACAATGGTAGGAGTCCAACCAGCACCGATTCTTGCAGCGTTCAGTTCCAGAGGCCCAAATTCCATCACGCCGGAGATACTTAAGCCGGATATCATCGCGCCAGGTGTCAATATTCTGGCCGGTTGGAGCGGTGCAGTCGGTCCTACGGGGTTGCCTGAGGACGATAGACGGGTCGAGTTCAACATTATCTCAGGCACATCCATGTCGTGTCCACACGTGAGTGGCTTAGCGGCTTTGCTCAAAGGAGTCCACCCAGAATGGAGCCCCGCCGCCATTCGTTCGGCGCTCATGACCACCGCTTACACCACCTACAGGAACGGCGGAGCACTACTAGACGTAGCTACCGGAAAACCATCTACACCTTTCGGTCACGGCGCTGGGCACGTGGATCCCGTTTCAGCGGTGAACCCAGGTCTTGTTTACGACATAAACGCCGATGATTACCTCAATTTCCTGTGTGCATTGAAATACAGTCCATCACAAATCAATATCATAGCAAGAAGAAACTTCACATGTGATTCAAGCAAAATATACAGCGTCACAGATTTGAATTACCCTTCGTTTTCAGTTGCATTCCCTGCCGATACCGGTTCAAACACAATCAGATACAGCCGGACACTGACTAATGTTGGACCGTCTGGAACATACAAAGTTGCTGTTACTTTGCCCGATAGTTCCGTGGAAATTATAGTTGAACCTGAAACAGTTAGTTTTACTCAGATTAATGAGAAGATATCGTATAGTGTGAGTTTTACTGCTCCATCAAAGCCCCCATCTACCAATGTATTCGGCAAAATTGAGTGGTCAGATGGGACGCATTTGGTCACTAGTCCAGTTGCAATTTCTTGGTCATGAATTATATGAACAAATTAAAGAGCTATATATAGCTGCTATCGATTTAATGTAAAGTTAATCAAAGAAATTTATGCTTCTTGCT</gDNA_template>
            <first_frame> A  F  L  V  M  L  Q  E  L  L  V  E  W  L  I  V  P  E  L  P  S  T  R  F  A  G  L  G  N  A  L  A  P  T  Y  W  Q  V  W  T  K  P  L  M  I  M  L  M  C  F  H  Y  H  L  V  E  S  I  L  I  S  T  A  T  M  L  Q  L  E  H  L  L  Q  W  R  R  V  L  W  F  L  A  L  L  E  M  L  D  P  I  N  S  V  W  L  T  K  H  L  G  S  P  P  W  V  P  E  Q  L  T  V  I  F  Q  H  M  *  A  L  A  M  V  K  I  S  P  V  F  H  F  T  R  V  I  H  Y  P  V  G  C  F  P  W  C  M  Q  V  M  P  A  M  Q  P  M  E  I  S  V  *  W  E  P  *  F  L  R  K  L  K  A  K  L  C  C  V  T  E  G  L  T  S  E  L  K  R  V  M  W  *  N  Q  P  V  E  P  A  *  F  L  L  T  Q  M  G  W  G  Y  W  L  T  P  I  Y  F  Q  R  R  L  W  V  N  *  M  A  M  K  S  R  S  I  *  H  Q  I  L  I  Q  R  P  R  F  F  L  E  E  Q  W  *  E  S  N  Q  H  R  F  L  Q  R  S  V  P  E  A  Q  I  P  S  R  R  R  Y  L  S  R  I  S  S  R  Q  V  S  I  F  W  P  V  G  A  V  Q  S  V  L  R  G  C  L  R  T  I  D  G  S  S  S  T  L  S  Q  A  H  P  C  R  V  H  T  *  V  A  *  R  L  C  S  K  E  S  T  Q  N  G  A  P  P  P  F  V  R  R  S  *  P  P  L  T  P  P  T  G  T  A  E  H  Y  *  T  *  L  P  E  N  H  L  H  L  S  V  T  A  L  G  T  W  I  P  F  Q  R  *  T  Q  V  L  F  T  T  *  T  P  M  I  T  S  I  S  C  V  H  *  N  T  V  H  H  K  S  I  S  *  Q  E  E  T  S  H  V  I  Q  A  K  Y  T  A  S  Q  I  *  I  T  L  R  F  Q  L  H  S  L  P  I  P  V  Q  T  Q  S  D  T  A  G  H  *  L  M  L  D  R  L  E  H  T  K  L  L  L  L  C  P  I  V  P  W  K  L  *  L  N  L  K  Q  L  V  L  L  R  L  M  R  R  Y  R  I  V  *  V  L  L  L  H  Q  S  P  H  L  P  M  Y  S  A  K  L  S  G  Q  M  G  R  I  W  S  L  V  Q  L  Q  F  L  G  H  E  L  Y  E  Q  I  K  E  L  Y  I  A  A  I  D  L  M  *  S  *  S  K  K  F  M  L  L  A </first_frame>
            <second_frame>  P  F  W  L  C  F  R  N  C  S  W  N  G  L  S  C  Q  S  C  R  L  Q  G  L  L  A  W  E  M  L  W  P  R  H  I  G  R  Y  G  Q  S  H  *  *  *  C  *  C  A  F  I  I  T  W  W  R  A  F  *  F  L  Q  R  R  C  C  N  W  S  I  C  C  N  G  E  G  Y  Y  G  F  L  L  C  W  K  C  W  T  Q  S  I  Q  F  G  *  P  S  T  L  D  H  H  R  G  C  R  N  S  *  P  *  F  S  S  I  C  K  P  W  Q  W  *  K  F  L  R  C  F  T  L  R  G  *  S  I  T  Q  W  D  A  S  L  G  V  C  R  *  C  Q  Q  C  N  Q  W  K  S  L  Y  N  G  N  L  N  S  *  E  S  *  R  Q  N  C  A  V  *  R  R  G  *  R  Q  S  *  K  G  L  C  G  K  I  S  R  W  S  R  H  D  F  C  *  H  K  W  A  G  A  T  G  *  R  P  F  T  S  S  G  G  C  G  S  I  R  W  R  *  N  Q  E  V  Y  N  I  R  S  *  S  N  G  H  D  S  F  W  R  N  N  G  R  S  P  T  S  T  D  S  C  S  V  Q  F  Q  R  P  K  F  H  H  A  G  D  T  *  A  G  Y  H  R  A  R  C  Q  Y  S  G  R  L  E  R  C  S  R  S  Y  G  V  A  *  G  R  *  T  G  R  V  Q  H  Y  L  R  H  I  H  V  V  S  T  R  E  W  L  S  G  F  A  Q  R  S  P  P  R  M  E  P  R  R  H  S  F  G  A  H  D  H  R  L  H  H  L  Q  E  R  R  S  T  T  R  R  S  Y  R  K  T  I  Y  T  F  R  S  R  R  W  A  R  G  S  R  F  S  G  E  P  R  S  C  L  R  H  K  R  R  *  L  P  Q  F  P  V  C  I  E  I  Q  S  I  T  N  Q  Y  H  S  K  K  K  L  H  M  *  F  K  Q  N  I  Q  R  H  R  F  E  L  P  F  V  F  S  C  I  P  C  R  Y  R  F  K  H  N  Q  I  Q  P  D  T  D  *  C  W  T  V  W  N  I  Q  S  C  C  Y  F  A  R  *  F  R  G  N  Y  S  *  T  *  N  S  *  F  Y  S  D  *  *  E  D  I  V  *  C  E  F  Y  C  S  I  K  A  P  I  Y  Q  C  I  R  Q  N  *  V  V  R  W  D  A  F  G  H  *  S  S  C  N  F  L  V  M  N  Y  M  N  K  L  K  S  Y  I  *  L  L  S  I  *  C  K  V  N  Q  R  N  L  C  F  L   </second_frame>
            <third_frame>   L  F  G  Y  A  S  G  T  A  R  G  M  A  Y  R  A  R  V  A  V  Y  K  V  C  W  L  G  K  C  F  G  P  D  I  L  A  G  M  D  K  A  I  D  D  N  V  N  V  L  S  L  S  L  G  G  E  H  F  D  F  Y  S  D  D  V  A  I  G  A  F  A  A  M  E  K  G  I  M  V  S  C  S  A  G  N  A  G  P  N  Q  F  S  L  A  N  Q  A  P  W  I  T  T  V  G  A  G  T  V  D  R  D  F  P  A  Y  V  S  L  G  N  G  K  N  F  S  G  V  S  L  Y  A  G  D  P  L  P  S  G  M  L  P  L  V  Y  A  G  N  A  S  N  A  T  N  G  N  L  C  I  M  G  T  L  I  P  E  K  V  K  G  K  I  V  L  C  D  G  G  V  N  V  R  A  E  K  G  Y  V  V  K  S  A  G  G  A  G  M  I  F  A  N  T  N  G  L  G  L  L  A  D  A  H  L  L  P  A  A  A  V  G  Q  L  D  G  D  E  I  K  K  Y  I  T  S  D  P  N  P  T  A  T  I  L  F  G  G  T  M  V  G  V  Q  P  A  P  I  L  A  A  F  S  S  R  G  P  N  S  I  T  P  E  I  L  K  P  D  I  I  A  P  G  V  N  I  L  A  G  W  S  G  A  V  G  P  T  G  L  P  E  D  D  R  R  V  E  F  N  I  I  S  G  T  S  M  S  C  P  H  V  S  G  L  A  A  L  L  K  G  V  H  P  E  W  S  P  A  A  I  R  S  A  L  M  T  T  A  Y  T  T  Y  R  N  G  G  A  L  L  D  V  A  T  G  K  P  S  T  P  F  G  H  G  A  G  H  V  D  P  V  S  A  V  N  P  G  L  V  Y  D  I  N  A  D  D  Y  L  N  F  L  C  A  L  K  Y  S  P  S  Q  I  N  I  I  A  R  R  N  F  T  C  D  S  S  K  I  Y  S  V  T  D  L  N  Y  P  S  F  S  V  A  F  P  A  D  T  G  S  N  T  I  R  Y  S  R  T  L  T  N  V  G  P  S  G  T  Y  K  V  A  V  T  L  P  D  S  S  V  E  I  I  V  E  P  E  T  V  S  F  T  Q  I  N  E  K  I  S  Y  S  V  S  F  T  A  P  S  K  P  P  S  T  N  V  F  G  K  I  E  W  S  D  G  T  H  L  V  T  S  P  V  A  I  S  W  S  *  I  I  *  T  N  *  R  A  I  Y  S  C  Y  R  F  N  V  K  L  I  K  E  I  Y  A  S  C  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C00HBa0203P08.2" strand="+"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="57406" stop="58992"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1584</number_coding_nucleotides>
                  <number_encoded_amino_acids>528</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LFGYASGTARGMAYRARVAVYKVCWLGKCFGPDILAGMDKAIDDNVNVLSLSLGGEHFDFYSDDVAIGAFAAMEKGIMVSCSAGNAGPNQFSLANQAPWITTVGAGTVDRDFPAYVSLGNGKNFSGVSLYAGDPLPSGMLPLVYAGNASNATNGNLCIMGTLIPEKVKGKIVLCDGGVNVRAEKGYVVKSAGGAGMIFANTNGLGLLADAHLLPAAAVGQLDGDEIKKYITSDPNPTATILFGGTMVGVQPAPILAAFSSRGPNSITPEILKPDIIAPGVNILAGWSGAVGPTGLPEDDRRVEFNIISGTSMSCPHVSGLAALLKGVHPEWSPAAIRSALMTTAYTTYRNGGALLDVATGKPSTPFGHGAGHVDPVSAVNPGLVYDINADDYLNFLCALKYSPSQINIIARRNFTCDSSKIYSVTDLNYPSFSVAFPADTGSNTIRYSRTLTNVGPSGTYKVAVTLPDSSVEIIVEPETVSFTQINEKISYSVSFTAPSKPPSTNVFGKIEWSDGTHLVTSPVAISWS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="+" PGL_start="62581" PGL_stop="65098"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="62581" e_stop="65098"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="62581" e_stop="65098" e_length="2518"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62581" stop="65098"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U317724" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CATCCACTCCCTCTTATTAATGCAGCAGTCCAAGCGAAAAATTAATCAAAAATGTCTACATACACACTACTAGTTGTTGTACTTGTGTGCCTATGTCACATGTCTGTGGCAATGGTGGAGAAGAAAACATACATCATTCACATGGCTAAATCACAAATGCCAGCAATATTTGATGATCATACTCACTGGTATGACGCGTCCCTCAAATCCGTCTCTGAATCAGCAGAGATGATCTATGTTTATAAAAACGTTGTTCATGGTTTTGCAGCAAGGCTTACAGCTCGACAAGCTGAATCCTTAGAGACCCAACCTGGGATTCTCTCTGTTTTGCCTGAGCTGATATACCAACTCCACACTACTCGGACACCTCTTTTTTTGGGACTTGATAGAAGTGTTAATATCTTTCCTGAGTCCGATGCTATGAGTGATGTCATTGTCGGAGTACTCGATACAGGGGTTTGGCCGGAGAGAAAGAGCTTTGACGATACTGGATTTGGACCTGTACCAGATTCGTGGAAAGGTGAGTGTGAGTCCAGCAACAACTTCAGTTCTGCCATGTGTAACAGAAAGCTTGTTGGAGCGAGGTATTTTTCTAGGGGTTATGAAACTACTCTTGGACCAATTGATGAGTCCAAGGAGTCTAAATCTCCTAGGGATGATGATGGACATGGAACACACACTGCTTCGACAGCAGCTGGTTCAGTTGTTCAGGGTGCTAGCCTTTTTGGTTATGCTTCAGGAACTGCTCGTGGAATGGCCTATCGTGCCAGAGTTGCCATGTACAAAGTTTGCTGGCTTGGGGGATGTTTTAACTCTGACATATTGGCAGGGATGGACAAAGCCATTGATGATAAAGTTGATGTGCTTTCATTATCACTTGGTGGAAGCACACCAGATTACTACAAAGATAGCATTGCAATTGGAGCTTTTGCTGCTATGGAGAAGGGTATTTTGGTTTCTTGCTCTGCTGGAAATGCTGGACCTAATCAATTCAGTTTGGCCAACCAAGCACCTTGGATCACCACAGTCGGTGCTGGAACAATTGACCGTGATTTTCCAGCATATGTAAGCCTTGGCAATGGTAAAAATTTCTCCGGCGTTTCACTTTACGCGGGTGATTCATTACTTAATAAAATGCTTCCCTTGGTGTATGCTGGTAATGCCAGCAATGTAACCAGTGGAAATCTCTGTATGATGGGTACCTTAATTCCTGAGAAAGTTAAAGGAAAAATTGTGCTGTGTGACAGAGGGATTAGCGCTCGAGTCCAAAAGGGTTTTGTGGTAAAAGAGGCTGGTGGAGCCGGCATGGTTTTGGCTAACACCGCAGCAAATGGGGAGGAACTAGTGGCTGACGCCCATTTACTTCCAGCGGCGGCGGTGGGTCAAAAAGCCGGTGATGTAATCAAGAAATATTTATTCTCAGATCCTAATCCAACGGCCGAAATTCTTTTTGGAGGAACAAAAGTAGACATCGAACCGTCACCGGTTGTCGCAGCGTTCAGTTCTAGAGGCCCAAATTCAATCACCCCGGAGATACTCAAACCGGATATTATCGCGCCCGGTGTAAACATTCTGGCCGGTTGGACCGGAGCCGTCGGCCCGACGGGGATGGCAGAGGACGATAGACGGGTCGAGTTCAACATTATCTCAGGCACATCCATGTCGTGTCCACACGTGAGCGGCTTGGCGGCTTTGATAAAAGGAGTCCACCCAGAATGGAGCCCCGCCGCCATTCGTTCGGCGCTCATGACCTCCGCTTACACCGTCTACAAGAACGGCGGAGCACTAGTAGATGTCGCCACCGGAAAACCATCTACACCTTTCGACCACGGCGCTGGACACGTGGATCCCGTTTCGGCAGTGAACCCAGGTCTTGTTTACGACATAAACGCCGATGATTACCTCAATTTCATGTGTGCATTGAAATACACTCCATCACAAATCAACAGCTTAGCGAGAAGAAACTTCACGTGTGATTCAAGCAAAACATACAGCGTCACAGATTTGAATTACCCTTCATTTGCTGTTTCATTCGTTGCCGGGAGTGACGGTTCAAACACAATCAAGTACAGCCGGACATTGACTAATGTTGGACCGGCTGGAACATACAAAGTTACAGTTTCTTCCCCAAATAGTTCAGTGAAAATTATAGTTGAGCCTGAAACATTGAGTTTCACTCAGATTAATGAGAAGAAATCGTATACAGTGAGTTTTACTGCTCCATCAAAGTCCTCAGCTACGGATGTATTCGGTAGAATTGAGTGGTCAGATGGGAAGCATGTGGTTAGTAGTCCAGTTGCAATTTCTTGGTCATGAATAATATGAAGACATAGCTATAGCTTCTGTTAATTTTATGTATAAGTTGATGTTTTTCTGCTTTTAAGTTTCATTCCAGCACAAAAGTTTGTAGCTGGTCTCAAGATTTTTTTATGGATAACATGAAAGAATCAAAGAAATGTATGCCTTATACAATATCTTGCTCACTGTACGGTATTTTAAGCAATTCTAATTGTGAACT</gDNA_template>
            <first_frame> H  P  L  P  L  I  N  A  A  V  Q  A  K  N  *  S  K  M  S  T  Y  T  L  L  V  V  V  L  V  C  L  C  H  M  S  V  A  M  V  E  K  K  T  Y  I  I  H  M  A  K  S  Q  M  P  A  I  F  D  D  H  T  H  W  Y  D  A  S  L  K  S  V  S  E  S  A  E  M  I  Y  V  Y  K  N  V  V  H  G  F  A  A  R  L  T  A  R  Q  A  E  S  L  E  T  Q  P  G  I  L  S  V  L  P  E  L  I  Y  Q  L  H  T  T  R  T  P  L  F  L  G  L  D  R  S  V  N  I  F  P  E  S  D  A  M  S  D  V  I  V  G  V  L  D  T  G  V  W  P  E  R  K  S  F  D  D  T  G  F  G  P  V  P  D  S  W  K  G  E  C  E  S  S  N  N  F  S  S  A  M  C  N  R  K  L  V  G  A  R  Y  F  S  R  G  Y  E  T  T  L  G  P  I  D  E  S  K  E  S  K  S  P  R  D  D  D  G  H  G  T  H  T  A  S  T  A  A  G  S  V  V  Q  G  A  S  L  F  G  Y  A  S  G  T  A  R  G  M  A  Y  R  A  R  V  A  M  Y  K  V  C  W  L  G  G  C  F  N  S  D  I  L  A  G  M  D  K  A  I  D  D  K  V  D  V  L  S  L  S  L  G  G  S  T  P  D  Y  Y  K  D  S  I  A  I  G  A  F  A  A  M  E  K  G  I  L  V  S  C  S  A  G  N  A  G  P  N  Q  F  S  L  A  N  Q  A  P  W  I  T  T  V  G  A  G  T  I  D  R  D  F  P  A  Y  V  S  L  G  N  G  K  N  F  S  G  V  S  L  Y  A  G  D  S  L  L  N  K  M  L  P  L  V  Y  A  G  N  A  S  N  V  T  S  G  N  L  C  M  M  G  T  L  I  P  E  K  V  K  G  K  I  V  L  C  D  R  G  I  S  A  R  V  Q  K  G  F  V  V  K  E  A  G  G  A  G  M  V  L  A  N  T  A  A  N  G  E  E  L  V  A  D  A  H  L  L  P  A  A  A  V  G  Q  K  A  G  D  V  I  K  K  Y  L  F  S  D  P  N  P  T  A  E  I  L  F  G  G  T  K  V  D  I  E  P  S  P  V  V  A  A  F  S  S  R  G  P  N  S  I  T  P  E  I  L  K  P  D  I  I  A  P  G  V  N  I  L  A  G  W  T  G  A  V  G  P  T  G  M  A  E  D  D  R  R  V  E  F  N  I  I  S  G  T  S  M  S  C  P  H  V  S  G  L  A  A  L  I  K  G  V  H  P  E  W  S  P  A  A  I  R  S  A  L  M  T  S  A  Y  T  V  Y  K  N  G  G  A  L  V  D  V  A  T  G  K  P  S  T  P  F  D  H  G  A  G  H  V  D  P  V  S  A  V  N  P  G  L  V  Y  D  I  N  A  D  D  Y  L  N  F  M  C  A  L  K  Y  T  P  S  Q  I  N  S  L  A  R  R  N  F  T  C  D  S  S  K  T  Y  S  V  T  D  L  N  Y  P  S  F  A  V  S  F  V  A  G  S  D  G  S  N  T  I  K  Y  S  R  T  L  T  N  V  G  P  A  G  T  Y  K  V  T  V  S  S  P  N  S  S  V  K  I  I  V  E  P  E  T  L  S  F  T  Q  I  N  E  K  K  S  Y  T  V  S  F  T  A  P  S  K  S  S  A  T  D  V  F  G  R  I  E  W  S  D  G  K  H  V  V  S  S  P  V  A  I  S  W  S  *  I  I  *  R  H  S  Y  S  F  C  *  F  Y  V  *  V  D  V  F  L  L  L  S  F  I  P  A  Q  K  F  V  A  G  L  K  I  F  L  W  I  T  *  K  N  Q  R  N  V  C  L  I  Q  Y  L  A  H  C  T  V  F  *  A  I  L  I  V  N  </first_frame>
            <second_frame>  I  H  S  L  L  L  M  Q  Q  S  K  R  K  I  N  Q  K  C  L  H  T  H  Y  *  L  L  Y  L  C  A  Y  V  T  C  L  W  Q  W  W  R  R  K  H  T  S  F  T  W  L  N  H  K  C  Q  Q  Y  L  M  I  I  L  T  G  M  T  R  P  S  N  P  S  L  N  Q  Q  R  *  S  M  F  I  K  T  L  F  M  V  L  Q  Q  G  L  Q  L  D  K  L  N  P  *  R  P  N  L  G  F  S  L  F  C  L  S  *  Y  T  N  S  T  L  L  G  H  L  F  F  W  D  L  I  E  V  L  I  S  F  L  S  P  M  L  *  V  M  S  L  S  E  Y  S  I  Q  G  F  G  R  R  E  R  A  L  T  I  L  D  L  D  L  Y  Q  I  R  G  K  V  S  V  S  P  A  T  T  S  V  L  P  C  V  T  E  S  L  L  E  R  G  I  F  L  G  V  M  K  L  L  L  D  Q  L  M  S  P  R  S  L  N  L  L  G  M  M  M  D  M  E  H  T  L  L  R  Q  Q  L  V  Q  L  F  R  V  L  A  F  L  V  M  L  Q  E  L  L  V  E  W  P  I  V  P  E  L  P  C  T  K  F  A  G  L  G  D  V  L  T  L  T  Y  W  Q  G  W  T  K  P  L  M  I  K  L  M  C  F  H  Y  H  L  V  E  A  H  Q  I  T  T  K  I  A  L  Q  L  E  L  L  L  L  W  R  R  V  F  W  F  L  A  L  L  E  M  L  D  L  I  N  S  V  W  P  T  K  H  L  G  S  P  Q  S  V  L  E  Q  L  T  V  I  F  Q  H  M  *  A  L  A  M  V  K  I  S  P  A  F  H  F  T  R  V  I  H  Y  L  I  K  C  F  P  W  C  M  L  V  M  P  A  M  *  P  V  E  I  S  V  *  W  V  P  *  F  L  R  K  L  K  E  K  L  C  C  V  T  E  G  L  A  L  E  S  K  R  V  L  W  *  K  R  L  V  E  P  A  W  F  W  L  T  P  Q  Q  M  G  R  N  *  W  L  T  P  I  Y  F  Q  R  R  R  W  V  K  K  P  V  M  *  S  R  N  I  Y  S  Q  I  L  I  Q  R  P  K  F  F  L  E  E  Q  K  *  T  S  N  R  H  R  L  S  Q  R  S  V  L  E  A  Q  I  Q  S  P  R  R  Y  S  N  R  I  L  S  R  P  V  *  T  F  W  P  V  G  P  E  P  S  A  R  R  G  W  Q  R  T  I  D  G  S  S  S  T  L  S  Q  A  H  P  C  R  V  H  T  *  A  A  W  R  L  *  *  K  E  S  T  Q  N  G  A  P  P  P  F  V  R  R  S  *  P  P  L  T  P  S  T  R  T  A  E  H  *  *  M  S  P  P  E  N  H  L  H  L  S  T  T  A  L  D  T  W  I  P  F  R  Q  *  T  Q  V  L  F  T  T  *  T  P  M  I  T  S  I  S  C  V  H  *  N  T  L  H  H  K  S  T  A  *  R  E  E  T  S  R  V  I  Q  A  K  H  T  A  S  Q  I  *  I  T  L  H  L  L  F  H  S  L  P  G  V  T  V  Q  T  Q  S  S  T  A  G  H  *  L  M  L  D  R  L  E  H  T  K  L  Q  F  L  P  Q  I  V  Q  *  K  L  *  L  S  L  K  H  *  V  S  L  R  L  M  R  R  N  R  I  Q  *  V  L  L  L  H  Q  S  P  Q  L  R  M  Y  S  V  E  L  S  G  Q  M  G  S  M  W  L  V  V  Q  L  Q  F  L  G  H  E  *  Y  E  D  I  A  I  A  S  V  N  F  M  Y  K  L  M  F  F  C  F  *  V  S  F  Q  H  K  S  L  *  L  V  S  R  F  F  Y  G  *  H  E  R  I  K  E  M  Y  A  L  Y  N  I  L  L  T  V  R  Y  F  K  Q  F  *  L  *  T </second_frame>
            <third_frame>   S  T  P  S  Y  *  C  S  S  P  S  E  K  L  I  K  N  V  Y  I  H  T  T  S  C  C  T  C  V  P  M  S  H  V  C  G  N  G  G  E  E  N  I  H  H  S  H  G  *  I  T  N  A  S  N  I  *  *  S  Y  S  L  V  *  R  V  P  Q  I  R  L  *  I  S  R  D  D  L  C  L  *  K  R  C  S  W  F  C  S  K  A  Y  S  S  T  S  *  I  L  R  D  P  T  W  D  S  L  C  F  A  *  A  D  I  P  T  P  H  Y  S  D  T  S  F  F  G  T  *  *  K  C  *  Y  L  S  *  V  R  C  Y  E  *  C  H  C  R  S  T  R  Y  R  G  L  A  G  E  K  E  L  *  R  Y  W  I  W  T  C  T  R  F  V  E  R  *  V  *  V  Q  Q  Q  L  Q  F  C  H  V  *  Q  K  A  C  W  S  E  V  F  F  *  G  L  *  N  Y  S  W  T  N  *  *  V  Q  G  V  *  I  S  *  G  *  *  W  T  W  N  T  H  C  F  D  S  S  W  F  S  C  S  G  C  *  P  F  W  L  C  F  R  N  C  S  W  N  G  L  S  C  Q  S  C  H  V  Q  S  L  L  A  W  G  M  F  *  L  *  H  I  G  R  D  G  Q  S  H  *  *  *  S  *  C  A  F  I  I  T  W  W  K  H  T  R  L  L  Q  R  *  H  C  N  W  S  F  C  C  Y  G  E  G  Y  F  G  F  L  L  C  W  K  C  W  T  *  S  I  Q  F  G  Q  P  S  T  L  D  H  H  S  R  C  W  N  N  *  P  *  F  S  S  I  C  K  P  W  Q  W  *  K  F  L  R  R  F  T  L  R  G  *  F  I  T  *  *  N  A  S  L  G  V  C  W  *  C  Q  Q  C  N  Q  W  K  S  L  Y  D  G  Y  L  N  S  *  E  S  *  R  K  N  C  A  V  *  Q  R  D  *  R  S  S  P  K  G  F  C  G  K  R  G  W  W  S  R  H  G  F  G  *  H  R  S  K  W  G  G  T  S  G  *  R  P  F  T  S  S  G  G  G  G  S  K  S  R  *  C  N  Q  E  I  F  I  L  R  S  *  S  N  G  R  N  S  F  W  R  N  K  S  R  H  R  T  V  T  G  C  R  S  V  Q  F  *  R  P  K  F  N  H  P  G  D  T  Q  T  G  Y  Y  R  A  R  C  K  H  S  G  R  L  D  R  S  R  R  P  D  G  D  G  R  G  R  *  T  G  R  V  Q  H  Y  L  R  H  I  H  V  V  S  T  R  E  R  L  G  G  F  D  K  R  S  P  P  R  M  E  P  R  R  H  S  F  G  A  H  D  L  R  L  H  R  L  Q  E  R  R  S  T  S  R  C  R  H  R  K  T  I  Y  T  F  R  P  R  R  W  T  R  G  S  R  F  G  S  E  P  R  S  C  L  R  H  K  R  R  *  L  P  Q  F  H  V  C  I  E  I  H  S  I  T  N  Q  Q  L  S  E  K  K  L  H  V  *  F  K  Q  N  I  Q  R  H  R  F  E  L  P  F  I  C  C  F  I  R  C  R  E  *  R  F  K  H  N  Q  V  Q  P  D  I  D  *  C  W  T  G  W  N  I  Q  S  Y  S  F  F  P  K  *  F  S  E  N  Y  S  *  A  *  N  I  E  F  H  S  D  *  *  E  E  I  V  Y  S  E  F  Y  C  S  I  K  V  L  S  Y  G  C  I  R  *  N  *  V  V  R  W  E  A  C  G  *  *  S  S  C  N  F  L  V  M  N  N  M  K  T  *  L  *  L  L  L  I  L  C  I  S  *  C  F  S  A  F  K  F  H  S  S  T  K  V  C  S  W  S  Q  D  F  F  M  D  N  M  K  E  S  K  K  C  M  P  Y  T  I  S  C  S  L  Y  G  I  L  S  N  S  N  C  E   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C00HBa0203P08.2" strand="+"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="62626" stop="64896"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>2268</number_coding_nucleotides>
                  <number_encoded_amino_acids>756</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SKMSTYTLLVVVLVCLCHMSVAMVEKKTYIIHMAKSQMPAIFDDHTHWYDASLKSVSESAEMIYVYKNVVHGFAARLTARQAESLETQPGILSVLPELIYQLHTTRTPLFLGLDRSVNIFPESDAMSDVIVGVLDTGVWPERKSFDDTGFGPVPDSWKGECESSNNFSSAMCNRKLVGARYFSRGYETTLGPIDESKESKSPRDDDGHGTHTASTAAGSVVQGASLFGYASGTARGMAYRARVAMYKVCWLGGCFNSDILAGMDKAIDDKVDVLSLSLGGSTPDYYKDSIAIGAFAAMEKGILVSCSAGNAGPNQFSLANQAPWITTVGAGTIDRDFPAYVSLGNGKNFSGVSLYAGDSLLNKMLPLVYAGNASNVTSGNLCMMGTLIPEKVKGKIVLCDRGISARVQKGFVVKEAGGAGMVLANTAANGEELVADAHLLPAAAVGQKAGDVIKKYLFSDPNPTAEILFGGTKVDIEPSPVVAAFSSRGPNSITPEILKPDIIAPGVNILAGWTGAVGPTGMAEDDRRVEFNIISGTSMSCPHVSGLAALIKGVHPEWSPAAIRSALMTSAYTVYKNGGALVDVATGKPSTPFDHGAGHVDPVSAVNPGLVYDINADDYLNFMCALKYTPSQINSLARRNFTCDSSKTYSVTDLNYPSFAVSFVAGSDGSNTIKYSRTLTNVGPAGTYKVTVSSPNSSVKIIVEPETLSFTQINEKKSYTVSFTAPSKSSATDVFGRIEWSDGKHVVSSPVAISWS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="+" PGL_start="67651" PGL_stop="67995"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="67651" e_stop="67995"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.980"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.980">
            <gDNA_exon_boundary e_start="67651" e_stop="67995" e_length="345"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="67651" stop="67995"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U341584" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TCATTCTTTACGTAATCTTTCTTCAAATTATAATATCTGCAATCCAACCAAATAATTAAAGGAAAAATCACCATGATATAGAGATCATGTCTGCCGGTTTAAAGAAAACATGATAAGAAAGAAGAGAAATTTCTCTTACTCTTTGGTGATCTCTGAATATGAAACAAGACTTTCCGTGGACCATCACAATTCTGAAGAGCTGTTAAAATCATGCAAACTAAGCCACCATGTATTCTGTTACTCCTCTGGTATAACACTTCTCCACAATACTTACTAGAAGCAAAGTATTAATTTAGCCTTTTCAGGGCATCAATCTGCAAAGTGTCTCGAAAGCAAAATTGAACT</gDNA_template>
            <first_frame> S  F  F  T  *  S  F  F  K  L  *  Y  L  Q  S  N  Q  I  I  K  G  K  I  T  M  I  *  R  S  C  L  P  V  *  R  K  H  D  K  K  E  E  K  F  L  L  L  F  G  D  L  *  I  *  N  K  T  F  R  G  P  S  Q  F  *  R  A  V  K  I  M  Q  T  K  P  P  C  I  L  L  L  L  W  Y  N  T  S  P  Q  Y  L  L  E  A  K  Y  *  F  S  L  F  R  A  S  I  C  K  V  S  R  K  Q  N  *  T </first_frame>
            <second_frame>  H  S  L  R  N  L  S  S  N  Y  N  I  C  N  P  T  K  *  L  K  E  K  S  P  *  Y  R  D  H  V  C  R  F  K  E  N  M  I  R  K  K  R  N  F  S  Y  S  L  V  I  S  E  Y  E  T  R  L  S  V  D  H  H  N  S  E  E  L  L  K  S  C  K  L  S  H  H  V  F  C  Y  S  S  G  I  T  L  L  H  N  T  Y  *  K  Q  S  I  N  L  A  F  S  G  H  Q  S  A  K  C  L  E  S  K  I  E   </second_frame>
            <third_frame>   I  L  Y  V  I  F  L  Q  I  I  I  S  A  I  Q  P  N  N  *  R  K  N  H  H  D  I  E  I  M  S  A  G  L  K  K  T  *  *  E  R  R  E  I  S  L  T  L  W  *  S  L  N  M  K  Q  D  F  P  W  T  I  T  I  L  K  S  C  *  N  H  A  N  *  A  T  M  Y  S  V  T  P  L  V  *  H  F  S  T  I  L  T  R  S  K  V  L  I  *  P  F  Q  G  I  N  L  Q  S  V  S  K  A  K  L  N  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C00HBa0203P08.2" strand="+"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="67727" stop="67927"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>198</number_coding_nucleotides>
                  <number_encoded_amino_acids>66</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>YRDHVCRFKENMIRKKRNFSYSLVISEYETRLSVDHHNSEELLKSCKLSHHVFCYSSGITLLHNTY*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="13" PGL_strand="-" PGL_start="73496" PGL_stop="68972"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="73496" e_stop="73292"/>
            <exon e_start="72457" e_stop="72313"/>
            <exon e_start="71846" e_stop="71678"/>
            <exon e_start="71130" e_stop="70872"/>
            <exon e_start="69991" e_stop="69903"/>
            <exon e_start="69274" e_stop="69092"/>
            <exon e_start="69012" e_stop="68972"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.987" acc_prob="0.988" e_score="0.995"/>
          <exon-intron don_prob="0.955" acc_prob="0.869" e_score="0.966"/>
          <exon-intron don_prob="0.996" acc_prob="0.982" e_score="0.970"/>
          <exon-intron don_prob="0.911" acc_prob="0.990" e_score="0.969"/>
          <exon-intron don_prob="0.000" acc_prob="0.987" e_score="1.000"/>
          <exon-intron don_prob="0.987" acc_prob="0.982" e_score="0.934"/>
          <exon-only e_score="0.976"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.995">
            <gDNA_exon_boundary e_start="73496" e_stop="73292" e_length="205"/>
          </exon>
          <intron i_serial="1" don_prob="0.987" acc_prob="0.988">
            <gDNA_intron_boundary i_start="73291" i_stop="72458" i_length="834"/>
          </intron>
          <exon e_serial="2" e_score="0.966">
            <gDNA_exon_boundary e_start="72457" e_stop="72313" e_length="145"/>
          </exon>
          <intron i_serial="2" don_prob="0.955" acc_prob="0.869">
            <gDNA_intron_boundary i_start="72312" i_stop="71847" i_length="466"/>
          </intron>
          <exon e_serial="3" e_score="0.970">
            <gDNA_exon_boundary e_start="71846" e_stop="71678" e_length="169"/>
          </exon>
          <intron i_serial="3" don_prob="0.996" acc_prob="0.982">
            <gDNA_intron_boundary i_start="71677" i_stop="71131" i_length="547"/>
          </intron>
          <exon e_serial="4" e_score="0.969">
            <gDNA_exon_boundary e_start="71130" e_stop="70872" e_length="259"/>
          </exon>
          <intron i_serial="4" don_prob="0.911" acc_prob="0.990">
            <gDNA_intron_boundary i_start="70871" i_stop="69992" i_length="880"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="69991" e_stop="69903" e_length="89"/>
          </exon>
          <intron i_serial="5" don_prob="0.000" acc_prob="0.987">
            <gDNA_intron_boundary i_start="69902" i_stop="69275" i_length="628"/>
          </intron>
          <exon e_serial="6" e_score="0.934">
            <gDNA_exon_boundary e_start="69274" e_stop="69092" e_length="183"/>
          </exon>
          <intron i_serial="6" don_prob="0.987" acc_prob="0.982">
            <gDNA_intron_boundary i_start="69091" i_stop="69013" i_length="79"/>
          </intron>
          <exon e_serial="7" e_score="0.976">
            <gDNA_exon_boundary e_start="69012" e_stop="68972" e_length="41"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="73496" stop="73292"/>
              <exon start="72457" stop="72313"/>
              <exon start="71846" stop="71678"/>
              <exon start="71130" stop="70872"/>
              <exon start="69991" stop="69903"/>
              <exon start="69274" stop="69092"/>
              <exon start="69012" stop="68972"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U332833" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ATTTTCTTAAGAATGGGGGTGATCGTCGAGAGCAATGTTTGGGAGCCAAATCCAGCACTGTGTTTATTCTTCTTCATATCATGTTGCTTGTCAATCTACTATTTGCCAAGCAGCACCAGAAGTTCCGCCATTTTCGATCACGCACCTTCGTCTTCCTTCATTCGTTTCCAGAGAAGTTTCCTTTTACTCTATTCGCTTTCTTCAG : TAATGGAAGGCTTGTTGGCAGTATTTGGAGAGTACGACTTAGCATTCCATGGCATTAGTAGGGAGCAGATGGTCATCTCTCTATGTGTTGGATACGCAACTGCTCTCTTTGTCGGTACCTTTTTGGGAATGCTCTCGGATTTGAT : TGGCCAGAGAAAAGTCAGCTTGTTATTTTGCTTGCTGCATCTTTTTGTTGCCGTATGGAGGAGGGTTACTGGACATCCAACTATTTGGCTCGCTAGCATCTGTCTGTCTCTTACCTCTACAATATTTTTCTTCAACTTCGAGACATGGATGGTTGTTGAGCATGATAAG : CTTGAGCAGAGGCAGGATTCAGTGAATGACATGTTTTGGTTAATGACTTTTGTTGAATCTGCATCTTTCATTGGAAGCCAAGTGGTTGGTAACTGGTTAATTGGTGGTCATGAAAAGACAACTTTGCTTGCTCCGTCCAGTGCAGTGGTAATAATGGCTCTTAGTGCTCTGGCTTATGTCAGCCGAGGATGGAAGGAAGATCCAAAATCAATTATTCTTAAAGAATATCAGACTAAATTTCATACATACATAATCAGTG : ATAAAAGGGTTTGGCTTTTGTCATGGACCCAAGCTACCATGCACTTCTCAATTGCAGTTTTTTGGATTACTTGGGCTCCAACCATTGTG : GCAGATGGGAGAGGGGTTTTGCTAGGTTTAGTATACCCCTGTGTACTTGGTGCGAAAATGCTTGGAAGCACTGCATTTTCCTGGTTCTCTAGTGGCCCTTTATCACTCCGAACAGAGGAGTGCTTAGTATATGCCTGTATTATTATGGGCTTTGTCACTTCCATTGTAGCTTTTGATTATCAG : GATGTTGAAATTCTTTTGATGCTATTCTGCATATTTCATGC</gDNA_template>
            <first_frame> I  F  L  R  M  G  V  I  V  E  S  N  V  W  E  P  N  P  A  L  C  L  F  F  F  I  S  C  C  L  S  I  Y  Y  L  P  S  S  T  R  S  S  A  I  F  D  H  A  P  S  S  S  F  I  R  F  Q  R  S  F  L  L  L  Y  S  L  S  S   : V  M  E  G  L  L  A  V  F  G  E  Y  D  L  A  F  H  G  I  S  R  E  Q  M  V  I  S  L  C  V  G  Y  A  T  A  L  F  V  G  T  F  L  G  M  L  S  D  L  I :   G  Q  R  K  V  S  L  L  F  C  L  L  H  L  F  V  A  V  W  R  R  V  T  G  H  P  T  I  W  L  A  S  I  C  L  S  L  T  S  T  I  F  F  F  N  F  E  T  W  M  V  V  E  H  D  K  :  L  E  Q  R  Q  D  S  V  N  D  M  F  W  L  M  T  F  V  E  S  A  S  F  I  G  S  Q  V  V  G  N  W  L  I  G  G  H  E  K  T  T  L  L  A  P  S  S  A  V  V  I  M  A  L  S  A  L  A  Y  V  S  R  G  W  K  E  D  P  K  S  I  I  L  K  E  Y  Q  T  K  F  H  T  Y  I  I  S   : D  K  R  V  W  L  L  S  W  T  Q  A  T  M  H  F  S  I  A  V  F  W  I  T  W  A  P  T  I  V  :  A  D  G  R  G  V  L  L  G  L  V  Y  P  C  V  L  G  A  K  M  L  G  S  T  A  F  S  W  F  S  S  G  P  L  S  L  R  T  E  E  C  L  V  Y  A  C  I  I  M  G  F  V  T  S  I  V  A  F  D  Y  Q  :  D  V  E  I  L  L  M  L  F  C  I  F  H   </first_frame>
            <second_frame>  F  S  *  E  W  G  *  S  S  R  A  M  F  G  S  Q  I  Q  H  C  V  Y  S  S  S  Y  H  V  A  C  Q  S  T  I  C  Q  A  A  P  E  V  P  P  F  S  I  T  H  L  R  L  P  S  F  V  S  R  E  V  S  F  Y  S  I  R  F  L  Q  :  *  W  K  A  C  W  Q  Y  L  E  S  T  T  *  H  S  M  A  L  V  G  S  R  W  S  S  L  Y  V  L  D  T  Q  L  L  S  L  S  V  P  F  W  E  C  S  R  I  *   : L  A  R  E  K  S  A  C  Y  F  A  C  C  I  F  L  L  P  Y  G  G  G  L  L  D  I  Q  L  F  G  S  L  A  S  V  C  L  L  P  L  Q  Y  F  S  S  T  S  R  H  G  W  L  L  S  M  I  S :   L  S  R  G  R  I  Q  *  M  T  C  F  G  *  *  L  L  L  N  L  H  L  S  L  E  A  K  W  L  V  T  G  *  L  V  V  M  K  R  Q  L  C  L  L  R  P  V  Q  W  *  *  W  L  L  V  L  W  L  M  S  A  E  D  G  R  K  I  Q  N  Q  L  F  L  K  N  I  R  L  N  F  I  H  T  *  S  V  :  I  K  G  F  G  F  C  H  G  P  K  L  P  C  T  S  Q  L  Q  F  F  G  L  L  G  L  Q  P  L  W :   Q  M  G  E  G  F  C  *  V  *  Y  T  P  V  Y  L  V  R  K  C  L  E  A  L  H  F  P  G  S  L  V  A  L  Y  H  S  E  Q  R  S  A  *  Y  M  P  V  L  L  W  A  L  S  L  P  L  *  L  L  I  I  R :   M  L  K  F  F  *  C  Y  S  A  Y  F  M  </second_frame>
            <third_frame>   F  L  K  N  G  G  D  R  R  E  Q  C  L  G  A  K  S  S  T  V  F  I  L  L  H  I  M  L  L  V  N  L  L  F  A  K  Q  H  Q  K  F  R  H  F  R  S  R  T  F  V  F  L  H  S  F  P  E  K  F  P  F  T  L  F  A  F  F  S :   N  G  R  L  V  G  S  I  W  R  V  R  L  S  I  P  W  H  *  *  G  A  D  G  H  L  S  M  C  W  I  R  N  C  S  L  C  R  Y  L  F  G  N  A  L  G  F  D  :  W  P  E  K  S  Q  L  V  I  L  L  A  A  S  F  C  C  R  M  E  E  G  Y  W  T  S  N  Y  L  A  R  *  H  L  S  V  S  Y  L  Y  N  I  F  L  Q  L  R  D  M  D  G  C  *  A  *  *   : A  *  A  E  A  G  F  S  E  *  H  V  L  V  N  D  F  C  *  I  C  I  F  H  W  K  P  S  G  W  *  L  V  N  W  W  S  *  K  D  N  F  A  C  S  V  Q  C  S  G  N  N  G  S  *  C  S  G  L  C  Q  P  R  M  E  G  R  S  K  I  N  Y  S  *  R  I  S  D  *  I  S  Y  I  H  N  Q  * :   *  K  G  L  A  F  V  M  D  P  S  Y  H  A  L  L  N  C  S  F  L  D  Y  L  G  S  N  H  C   : G  R  W  E  R  G  F  A  R  F  S  I  P  L  C  T  W  C  E  N  A  W  K  H  C  I  F  L  V  L  *  W  P  F  I  T  P  N  R  G  V  L  S  I  C  L  Y  Y  Y  G  L  C  H  F  H  C  S  F  *  L  S   : G  C  *  N  S  F  D  A  I  L  H  I  S  C </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C00HBa0203P08.2" strand="-"/>
                <serials PGL_serial="13" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="73496" stop="73292"/>
                    <exon start="72457" stop="72313"/>
                    <exon start="71846" stop="71678"/>
                    <exon start="71130" stop="70872"/>
                    <exon start="69991" stop="69903"/>
                    <exon start="69274" stop="69092"/>
                    <exon start="69012" stop="68974"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1089</number_coding_nucleotides>
                  <number_encoded_amino_acids>363</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IFLRMGVIVESNVWEPNPALCLFFFISCCLSIYYLPSSTRSSAIFDHAPSSSFIRFQRSFLLLYSLSSVMEGLLAVFGEYDLAFHGISREQMVISLCVGYATALFVGTFLGMLSDLIGQRKVSLLFCLLHLFVAVWRRVTGHPTIWLASICLSLTSTIFFFNFETWMVVEHDKLEQRQDSVNDMFWLMTFVESASFIGSQVVGNWLIGGHEKTTLLAPSSAVVIMALSALAYVSRGWKEDPKSIILKEYQTKFHTYIISDKRVWLLSWTQATMHFSIAVFWITWAPTIVADGRGVLLGLVYPCVLGAKMLGSTAFSWFSSGPLSLRTEECLVYACIIMGFVTSIVAFDYQDVEILLMLFCIFH</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="14" PGL_strand="+" PGL_start="75411" PGL_stop="75963"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="75411" e_stop="75963"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="75411" e_stop="75963" e_length="553"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="75411" stop="75963"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U342765" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TCATCTTCGTATGAGTTCATATTTCATAATGACAACCCAATAATGGCAACTCTCAATCATGTGTTCCACTGTGTAGTCTCCTTTAAATGTTCTGTAATTTGGCTCATGTAGCATGTGAATTGTTTAGTCACTCTTCTTACATAGATACTGGCTATGTGGTTCAGTACTCCTATCTTTCTCCTTGTACTTTGAAAATCTGAATTTAGGCAATTCGATTGTTTTTTATGTCTTATTAGATTGTCTTTTGTCTTTCTTTTCCAGCCTTCTACGATATTTCTGTGATGTTGTATAACTTCTGCCAAAAAAAATTTTCTTAGGCTTTCAATAGGAGATAGCCTAAGTAAAGAGTCGCATTCAAGTCTGAACAATAATCTTTATGGCTCTGCTTATCAGTGTCTACACAGATTTTCTTACCGGGTGAACTATTTTTATGTCTTCTTTCAGCCTCTGATAATTCATTAGTGTCTTTAGAGTTCATCTTGATTGATGTTTGTTTTGATCCTTCACTAACTTGTATTTATTGTTGCGGATGATGGCAGTGCAAGGTGTGCAT</gDNA_template>
            <first_frame> S  S  S  Y  E  F  I  F  H  N  D  N  P  I  M  A  T  L  N  H  V  F  H  C  V  V  S  F  K  C  S  V  I  W  L  M  *  H  V  N  C  L  V  T  L  L  T  *  I  L  A  M  W  F  S  T  P  I  F  L  L  V  L  *  K  S  E  F  R  Q  F  D  C  F  L  C  L  I  R  L  S  F  V  F  L  F  Q  P  S  T  I  F  L  *  C  C  I  T  S  A  K  K  N  F  L  R  L  S  I  G  D  S  L  S  K  E  S  H  S  S  L  N  N  N  L  Y  G  S  A  Y  Q  C  L  H  R  F  S  Y  R  V  N  Y  F  Y  V  F  F  Q  P  L  I  I  H  *  C  L  *  S  S  S  *  L  M  F  V  L  I  L  H  *  L  V  F  I  V  A  D  D  G  S  A  R  C  A  </first_frame>
            <second_frame>  H  L  R  M  S  S  Y  F  I  M  T  T  Q  *  W  Q  L  S  I  M  C  S  T  V  *  S  P  L  N  V  L  *  F  G  S  C  S  M  *  I  V  *  S  L  F  L  H  R  Y  W  L  C  G  S  V  L  L  S  F  S  L  Y  F  E  N  L  N  L  G  N  S  I  V  F  Y  V  L  L  D  C  L  L  S  F  F  S  S  L  L  R  Y  F  C  D  V  V  *  L  L  P  K  K  I  F  L  G  F  Q  *  E  I  A  *  V  K  S  R  I  Q  V  *  T  I  I  F  M  A  L  L  I  S  V  Y  T  D  F  L  T  G  *  T  I  F  M  S  S  F  S  L  *  *  F  I  S  V  F  R  V  H  L  D  *  C  L  F  *  S  F  T  N  L  Y  L  L  L  R  M  M  A  V  Q  G  V  H </second_frame>
            <third_frame>   I  F  V  *  V  H  I  S  *  *  Q  P  N  N  G  N  S  Q  S  C  V  P  L  C  S  L  L  *  M  F  C  N  L  A  H  V  A  C  E  L  F  S  H  S  S  Y  I  D  T  G  Y  V  V  Q  Y  S  Y  L  S  P  C  T  L  K  I  *  I  *  A  I  R  L  F  F  M  S  Y  *  I  V  F  C  L  S  F  P  A  F  Y  D  I  S  V  M  L  Y  N  F  C  Q  K  K  F  S  *  A  F  N  R  R  *  P  K  *  R  V  A  F  K  S  E  Q  *  S  L  W  L  C  L  S  V  S  T  Q  I  F  L  P  G  E  L  F  L  C  L  L  S  A  S  D  N  S  L  V  S  L  E  F  I  L  I  D  V  C  F  D  P  S  L  T  C  I  Y  C  C  G  *  W  Q  C  K  V  C   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C00HBa0203P08.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="15" PGL_strand="-" PGL_start="83308" PGL_stop="76447"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="83308" e_stop="82985"/>
            <exon e_start="81808" e_stop="81679"/>
            <exon e_start="81119" e_stop="80925"/>
            <exon e_start="79444" e_stop="79287"/>
            <exon e_start="78440" e_stop="78350"/>
            <exon e_start="78163" e_stop="78098"/>
            <exon e_start="77907" e_stop="77825"/>
            <exon e_start="77636" e_stop="77573"/>
            <exon e_start="77437" e_stop="77369"/>
            <exon e_start="76904" e_stop="76509"/>
            <exon e_start="76455" e_stop="76447"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.996" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.975" acc_prob="0.273" e_score="1.000"/>
          <exon-intron don_prob="0.989" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.568" acc_prob="0.911" e_score="1.000"/>
          <exon-intron don_prob="0.930" acc_prob="0.941" e_score="1.000"/>
          <exon-intron don_prob="0.987" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.900" acc_prob="0.917" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.992" acc_prob="0.967" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.625" e_score="1.000"/>
          <exon-only e_score="0.667"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="83308" e_stop="82985" e_length="324"/>
          </exon>
          <intron i_serial="1" don_prob="0.996" acc_prob="0.994">
            <gDNA_intron_boundary i_start="82984" i_stop="81809" i_length="1176"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="81808" e_stop="81679" e_length="130"/>
          </exon>
          <intron i_serial="2" don_prob="0.975" acc_prob="0.273">
            <gDNA_intron_boundary i_start="81678" i_stop="81120" i_length="559"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="81119" e_stop="80925" e_length="195"/>
          </exon>
          <intron i_serial="3" don_prob="0.989" acc_prob="0.992">
            <gDNA_intron_boundary i_start="80924" i_stop="79445" i_length="1480"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="79444" e_stop="79287" e_length="158"/>
          </exon>
          <intron i_serial="4" don_prob="0.568" acc_prob="0.911">
            <gDNA_intron_boundary i_start="79286" i_stop="78441" i_length="846"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="78440" e_stop="78350" e_length="91"/>
          </exon>
          <intron i_serial="5" don_prob="0.930" acc_prob="0.941">
            <gDNA_intron_boundary i_start="78349" i_stop="78164" i_length="186"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="78163" e_stop="78098" e_length="66"/>
          </exon>
          <intron i_serial="6" don_prob="0.987" acc_prob="0.992">
            <gDNA_intron_boundary i_start="78097" i_stop="77908" i_length="190"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="77907" e_stop="77825" e_length="83"/>
          </exon>
          <intron i_serial="7" don_prob="0.900" acc_prob="0.917">
            <gDNA_intron_boundary i_start="77824" i_stop="77637" i_length="188"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="77636" e_stop="77573" e_length="64"/>
          </exon>
          <intron i_serial="8" don_prob="0.995" acc_prob="0.998">
            <gDNA_intron_boundary i_start="77572" i_stop="77438" i_length="135"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="77437" e_stop="77369" e_length="69"/>
          </exon>
          <intron i_serial="9" don_prob="0.992" acc_prob="0.967">
            <gDNA_intron_boundary i_start="77368" i_stop="76905" i_length="464"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="76904" e_stop="76509" e_length="396"/>
          </exon>
          <intron i_serial="10" don_prob="0.000" acc_prob="0.625">
            <gDNA_intron_boundary i_start="76508" i_stop="76456" i_length="53"/>
          </intron>
          <exon e_serial="11" e_score="0.667">
            <gDNA_exon_boundary e_start="76455" e_stop="76447" e_length="9"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83308" stop="82985"/>
              <exon start="81808" stop="81679"/>
              <exon start="81119" stop="80925"/>
              <exon start="79444" stop="79287"/>
              <exon start="78440" stop="78350"/>
              <exon start="78163" stop="78098"/>
              <exon start="77907" stop="77825"/>
              <exon start="77636" stop="77573"/>
              <exon start="77437" stop="77369"/>
              <exon start="76904" stop="76509"/>
              <exon start="76455" stop="76447"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U313852" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GTGAAAAGGGTCCCAATAGCAGCATACAAGAGAGAGCAAAAAGCTTTCCCAATCTATGGCTTTTTCCTAAAAATGGTGTGTGAGTAAAGTAGTGTTATTGCTCTGGCGGTTGCATCAAACAGAAGCGGGGCCCAATTCCTTCGTTGCATCTACCCAGCCTGCGTCTTCTTTGTTGTCCCTTTTCCGAAATCCGATACCTTTATCAATAACTCTTCAGTCTCTGATTTCCGGATAAACCATGTCCAAAGCTCGAGTATACACCGATATCAATGTGCTTCGTCCTAGGGAATATTGGGATTACGAATCGCTAACTGTTCAATGGGG : TGATCAGGATGACTATGAGGTTGTTCGAAAAGTTGGAAGAGGAAAATACAGTGAAGTTTTTGAAGGTATAAATGTTAACAGCAGGGAGAAGTGCATAATCAAGATCCTGAAACCTGTTAAGAAGAAAAAG : ATCAAAAGAGAGATAAAGATATTGCAAAATCTCTGTGGTGGACCAAATATTGTCAAACTCCTTGATATCGTCAGAGATCAGCATTCAAAAACTCCAAGCTTGATTTTTGAGTACGTGAACAGCACAGATTTCAAGGTTTTGTACCCAACGCTAACAGACTATGACATACGGTACTACATATATGAGCTTCTCAAG : GCACTAGATTATTGCCATTCACAGGGAATAATGCACAGGGATGTCAAACCTCATAACGTTATGATAGACCATGAACTGCGGAAGCTTCGCTTGATAGATTGGGGTCTTGCCGAATTTTACCACCCAGGGAAGGAATATAATGTTCGTGTGGCTTCAAG : ATACTTCAAGGGCCCTGAACTTCTAGTTGACTTGCAAGACTATGACTATTCTTTGGACATGTGGAGCCTTGGCTGCATGTTTGCAGGAATG : ATTTTCCGCAAGGAACCTTTCTTTTATGGCCATGATAATCAGGATCAGCTCGTCAAAATTGCAAAG : GTACTTGGGACAGATGAGTTGAATGCGTACTTGCACAAGTATCAACTAGAGCTTGATCCTCAGCTAGAGGCTATGGTTGGGAG : ACACAGTAGGAAGCCGTGGTCCAAATTTATTAATGCAGACAATCAGCATCTAGTGTCACCGGAG : GCTATAGATTATCTTGACAAGCTTCTCCGTTACGATCATCAGACTAGACTTACGGCAAAAGAAGCAATG : GCCCATCCATATTTCGGGCAAGTGAGGGCTGCTGAAACTAGCAGAATGAGGACACAGTAGCTTTCTTGTCTTGCTGTTAATGGGAAGAAAAAAAACTGTGTAATGTACCTTGTGTATCCATTTAAGTGACATTCGTGAGAACTATGTGGATTTGAACTTGAGCAGACATCTGAATTCAGGAATTACAGATCTTCATCATTGAACATTTCAAGAGAAATAGTGTTTTTTAGATTTCCTGATCGTGACCTTGATTGCAAATGGAAGTGACTTGCTGGGCGTCAAAAGTCACCCCACCCCCCCTTCCCCAAAGATACTATCTCCCTAGATGTGAACAAAAGCAGATTTTTGAAAATTAGTTCACTTTGTATATTAGTGCACTGGATTTTTCTGCATTCA : AAGAATGAA</gDNA_template>
            <first_frame> V  K  R  V  P  I  A  A  Y  K  R  E  Q  K  A  F  P  I  Y  G  F  F  L  K  M  V  C  E  *  S  S  V  I  A  L  A  V  A  S  N  R  S  G  A  Q  F  L  R  C  I  Y  P  A  C  V  F  F  V  V  P  F  P  K  S  D  T  F  I  N  N  S  S  V  S  D  F  R  I  N  H  V  Q  S  S  S  I  H  R  Y  Q  C  A  S  S  *  G  I  L  G  L  R  I  A  N  C  S  M  G  :  *  S  G  *  L  *  G  C  S  K  S  W  K  R  K  I  Q  *  S  F  *  R  Y  K  C  *  Q  Q  G  E  V  H  N  Q  D  P  E  T  C  *  E  E  K   : D  Q  K  R  D  K  D  I  A  K  S  L  W  W  T  K  Y  C  Q  T  P  *  Y  R  Q  R  S  A  F  K  N  S  K  L  D  F  *  V  R  E  Q  H  R  F  Q  G  F  V  P  N  A  N  R  L  *  H  T  V  L  H  I  *  A  S  Q   : G  T  R  L  L  P  F  T  G  N  N  A  Q  G  C  Q  T  S  *  R  Y  D  R  P  *  T  A  E  A  S  L  D  R  L  G  S  C  R  I  L  P  P  R  E  G  I  *  C  S  C  G  F  K  :  I  L  Q  G  P  *  T  S  S  *  L  A  R  L  *  L  F  F  G  H  V  E  P  W  L  H  V  C  R  N   : D  F  P  Q  G  T  F  L  L  W  P  *  *  S  G  S  A  R  Q  N  C  K   : G  T  W  D  R  *  V  E  C  V  L  A  Q  V  S  T  R  A  *  S  S  A  R  G  Y  G  W  E  :  T  Q  *  E  A  V  V  Q  I  Y  *  C  R  Q  S  A  S  S  V  T  G   : G  Y  R  L  S  *  Q  A  S  P  L  R  S  S  D  *  T  Y  G  K  R  S  N   : G  P  S  I  F  R  A  S  E  G  C  *  N  *  Q  N  E  D  T  V  A  F  L  S  C  C  *  W  E  E  K  K  L  C  N  V  P  C  V  S  I  *  V  T  F  V  R  T  M  W  I  *  T  *  A  D  I  *  I  Q  E  L  Q  I  F  I  I  E  H  F  K  R  N  S  V  F  *  I  S  *  S  *  P  *  L  Q  M  E  V  T  C  W  A  S  K  V  T  P  P  P  L  P  Q  R  Y  Y  L  P  R  C  E  Q  K  Q  I  F  E  N  *  F  T  L  Y  I  S  A  L  D  F  S  A  F   : K  E  *  </first_frame>
            <second_frame>  *  K  G  S  Q  *  Q  H  T  R  E  S  K  K  L  S  Q  S  M  A  F  S  *  K  W  C  V  S  K  V  V  L  L  L  W  R  L  H  Q  T  E  A  G  P  N  S  F  V  A  S  T  Q  P  A  S  S  L  L  S  L  F  R  N  P  I  P  L  S  I  T  L  Q  S  L  I  S  G  *  T  M  S  K  A  R  V  Y  T  D  I  N  V  L  R  P  R  E  Y  W  D  Y  E  S  L  T  V  Q  W  G :   D  Q  D  D  Y  E  V  V  R  K  V  G  R  G  K  Y  S  E  V  F  E  G  I  N  V  N  S  R  E  K  C  I  I  K  I  L  K  P  V  K  K  K  K  :  I  K  R  E  I  K  I  L  Q  N  L  C  G  G  P  N  I  V  K  L  L  D  I  V  R  D  Q  H  S  K  T  P  S  L  I  F  E  Y  V  N  S  T  D  F  K  V  L  Y  P  T  L  T  D  Y  D  I  R  Y  Y  I  Y  E  L  L  K  :  A  L  D  Y  C  H  S  Q  G  I  M  H  R  D  V  K  P  H  N  V  M  I  D  H  E  L  R  K  L  R  L  I  D  W  G  L  A  E  F  Y  H  P  G  K  E  Y  N  V  R  V  A  S  R :   Y  F  K  G  P  E  L  L  V  D  L  Q  D  Y  D  Y  S  L  D  M  W  S  L  G  C  M  F  A  G  M  :  I  F  R  K  E  P  F  F  Y  G  H  D  N  Q  D  Q  L  V  K  I  A  K  :  V  L  G  T  D  E  L  N  A  Y  L  H  K  Y  Q  L  E  L  D  P  Q  L  E  A  M  V  G  R :   H  S  R  K  P  W  S  K  F  I  N  A  D  N  Q  H  L  V  S  P  E  :  A  I  D  Y  L  D  K  L  L  R  Y  D  H  Q  T  R  L  T  A  K  E  A  M  :  A  H  P  Y  F  G  Q  V  R  A  A  E  T  S  R  M  R  T  Q  *  L  S  C  L  A  V  N  G  K  K  K  N  C  V  M  Y  L  V  Y  P  F  K  *  H  S  *  E  L  C  G  F  E  L  E  Q  T  S  E  F  R  N  Y  R  S  S  S  L  N  I  S  R  E  I  V  F  F  R  F  P  D  R  D  L  D  C  K  W  K  *  L  A  G  R  Q  K  S  P  H  P  P  F  P  K  D  T  I  S  L  D  V  N  K  S  R  F  L  K  I  S  S  L  C  I  L  V  H  W  I  F  L  H  S  :  K  N  E </second_frame>
            <third_frame>   E  K  G  P  N  S  S  I  Q  E  R  A  K  S  F  P  N  L  W  L  F  P  K  N  G  V  *  V  K  *  C  Y  C  S  G  G  C  I  K  Q  K  R  G  P  I  P  S  L  H  L  P  S  L  R  L  L  C  C  P  F  S  E  I  R  Y  L  Y  Q  *  L  F  S  L  *  F  P  D  K  P  C  P  K  L  E  Y  T  P  I  S  M  C  F  V  L  G  N  I  G  I  T  N  R  *  L  F  N  G   : V  I  R  M  T  M  R  L  F  E  K  L  E  E  E  N  T  V  K  F  L  K  V  *  M  L  T  A  G  R  S  A  *  S  R  S  *  N  L  L  R  R  K  R :   S  K  E  R  *  R  Y  C  K  I  S  V  V  D  Q  I  L  S  N  S  L  I  S  S  E  I  S  I  Q  K  L  Q  A  *  F  L  S  T  *  T  A  Q  I  S  R  F  C  T  Q  R  *  Q  T  M  T  Y  G  T  T  Y  M  S  F  S  R :   H  *  I  I  A  I  H  R  E  *  C  T  G  M  S  N  L  I  T  L  *  *  T  M  N  C  G  S  F  A  *  *  I  G  V  L  P  N  F  T  T  Q  G  R  N  I  M  F  V  W  L  Q   : D  T  S  R  A  L  N  F  *  L  T  C  K  T  M  T  I  L  W  T  C  G  A  L  A  A  C  L  Q  E  * :   F  S  A  R  N  L  S  F  M  A  M  I  I  R  I  S  S  S  K  L  Q  R :   Y  L  G  Q  M  S  *  M  R  T  C  T  S  I  N  *  S  L  I  L  S  *  R  L  W  L  G   : D  T  V  G  S  R  G  P  N  L  L  M  Q  T  I  S  I  *  C  H  R  R :   L  *  I  I  L  T  S  F  S  V  T  I  I  R  L  D  L  R  Q  K  K  Q  W :   P  I  H  I  S  G  K  *  G  L  L  K  L  A  E  *  G  H  S  S  F  L  V  L  L  L  M  G  R  K  K  T  V  *  C  T  L  C  I  H  L  S  D  I  R  E  N  Y  V  D  L  N  L  S  R  H  L  N  S  G  I  T  D  L  H  H  *  T  F  Q  E  K  *  C  F  L  D  F  L  I  V  T  L  I  A  N  G  S  D  L  L  G  V  K  S  H  P  T  P  P  S  P  K  I  L  S  P  *  M  *  T  K  A  D  F  *  K  L  V  H  F  V  Y  *  C  T  G  F  F  C  I  Q :   R  M   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C00HBa0203P08.2" strand="-"/>
                <serials PGL_serial="15" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="83073" stop="82985"/>
                    <exon start="81808" stop="81679"/>
                    <exon start="81119" stop="80925"/>
                    <exon start="79444" stop="79287"/>
                    <exon start="78440" stop="78350"/>
                    <exon start="78163" stop="78098"/>
                    <exon start="77907" stop="77825"/>
                    <exon start="77636" stop="77573"/>
                    <exon start="77437" stop="77369"/>
                    <exon start="76904" stop="76845"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1002</number_coding_nucleotides>
                  <number_encoded_amino_acids>334</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TMSKARVYTDINVLRPREYWDYESLTVQWGDQDDYEVVRKVGRGKYSEVFEGINVNSREKCIIKILKPVKKKKIKREIKILQNLCGGPNIVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNQDQLVKIAKVLGTDELNAYLHKYQLELDPQLEAMVGRHSRKPWSKFINADNQHLVSPEAIDYLDKLLRYDHQTRLTAKEAMAHPYFGQVRAAETSRMRTQ*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="16" PGL_strand="+" PGL_start="90244" PGL_stop="90635"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="90244" e_stop="90635"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="90244" e_stop="90635" e_length="392"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90244" stop="90635"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U343760" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="16" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATAGGTTTTGCTAATTCAACCAAGAAAATAGTTTAATTATGTAGGAAAGATCTTAATATGATGTGAAAATGACATTCCTGGAGGAGCCTATTGACGTCCTACACCAGCTATTCATTATTGACAATTGCCGTAGCTATCATTTGTCAGACAAATTTCAGTGGATATGCTTTCAGTCTGAGACTATTACCTAGCCAGGTCTAGGGTCCAATTAATCCGTACTAGCTTTGAACTAACATTGCAAAACTTGTCTTCACCCTTCTACTGGTGGATTTGGGTTATAGGGCAGGTGCGATCACACCTACTTTGGATACAATTGGGAACAATAACAATTAAAGTATCAAGAAACGAAATTCGATATCAGCTGGTTTGATATGTACCCCGATGGTTTTTTG</gDNA_template>
            <first_frame> I  G  F  A  N  S  T  K  K  I  V  *  L  C  R  K  D  L  N  M  M  *  K  *  H  S  W  R  S  L  L  T  S  Y  T  S  Y  S  L  L  T  I  A  V  A  I  I  C  Q  T  N  F  S  G  Y  A  F  S  L  R  L  L  P  S  Q  V  *  G  P  I  N  P  Y  *  L  *  T  N  I  A  K  L  V  F  T  L  L  L  V  D  L  G  Y  R  A  G  A  I  T  P  T  L  D  T  I  G  N  N  N  N  *  S  I  K  K  R  N  S  I  S  A  G  L  I  C  T  P  M  V  F   </first_frame>
            <second_frame>  *  V  L  L  I  Q  P  R  K  *  F  N  Y  V  G  K  I  L  I  *  C  E  N  D  I  P  G  G  A  Y  *  R  P  T  P  A  I  H  Y  *  Q  L  P  *  L  S  F  V  R  Q  I  S  V  D  M  L  S  V  *  D  Y  Y  L  A  R  S  R  V  Q  L  I  R  T  S  F  E  L  T  L  Q  N  L  S  S  P  F  Y  W  W  I  W  V  I  G  Q  V  R  S  H  L  L  W  I  Q  L  G  T  I  T  I  K  V  S  R  N  E  I  R  Y  Q  L  V  *  Y  V  P  R  W  F  F  </second_frame>
            <third_frame>   R  F  C  *  F  N  Q  E  N  S  L  I  M  *  E  R  S  *  Y  D  V  K  M  T  F  L  E  E  P  I  D  V  L  H  Q  L  F  I  I  D  N  C  R  S  Y  H  L  S  D  K  F  Q  W  I  C  F  Q  S  E  T  I  T  *  P  G  L  G  S  N  *  S  V  L  A  L  N  *  H  C  K  T  C  L  H  P  S  T  G  G  F  G  L  *  G  R  C  D  H  T  Y  F  G  Y  N  W  E  Q  *  Q  L  K  Y  Q  E  T  K  F  D  I  S  W  F  D  M  Y  P  D  G  F  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C00HBa0203P08.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="17" PGL_strand="+" PGL_start="91086" PGL_stop="93025"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="91086" e_stop="91311"/>
            <exon e_start="91431" e_stop="91500"/>
            <exon e_start="91880" e_stop="92494"/>
            <exon e_start="92576" e_stop="93025"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.965" e_score="1.000"/>
          <exon-intron don_prob="0.753" acc_prob="1.000" e_score="1.000"/>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="91086" e_stop="91311" e_length="226"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.995">
            <gDNA_intron_boundary i_start="91312" i_stop="91430" i_length="119"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="91431" e_stop="91500" e_length="70"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.965">
            <gDNA_intron_boundary i_start="91501" i_stop="91879" i_length="379"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="91880" e_stop="92494" e_length="615"/>
          </exon>
          <intron i_serial="3" don_prob="0.753" acc_prob="1.000">
            <gDNA_intron_boundary i_start="92495" i_stop="92575" i_length="81"/>
          </intron>
          <exon e_serial="4" e_score="0.998">
            <gDNA_exon_boundary e_start="92576" e_stop="93025" e_length="450"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="91086" stop="91311"/>
              <exon start="91431" stop="91500"/>
              <exon start="91880" stop="92494"/>
              <exon start="92576" stop="93025"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U317616" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="17" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GAACTTACAGAAGCAAAGAAAATGGCAACAAACATGTCTTTCTATTGTTTGCTTCATTAGGAAATAGTTTAAGGGAAAACGAATGAACATGGTTAAGGCCCGTAAAAGACTCGATCACCCATGGTGGATGACATGTTGATCTTGATAATGAACAACCTTCTACTCTAAACAGTATGTCCACTAAAAAGGAGCTTCTTTTCTCTGCTACAAAGAGGACCTCTCAATG : GATTTTCTCCCAGGAGATCCCAAGTGATGTGACTGTAAATGCCGCAGGAATCTCCTTTACACTACACAAG : TTCCCATTAGTTTCAAAGAGTGGATACATAAGGAAGTTGGTCTCGGAATCCAATGATGCTGACGTTTCTACGATCGAAATCCCTGATATACCTGGTGGAGGAGAGGCATTTGAATTTGCAGCAAAGTTTTGTTATGGAATAAATTTTGAGATAAGCACAAGAAACATTGCCTTGCTGAGATGTGCAGCAGAATATCTTGAGATGACAGAAGACTATGCAGTTGCAAATTTGGTGGGAAGAACTGAGGACTACTTTAGTGAAGTAGGAATTGAGAGCCTTCATAGTGCTGTTACAATTTTGCATTCATCAGAAAATCTTATTCCCATTTCAGAGAAAGTGAAATTGGTGAGCCGCTGCATTGACACAATTGCATATATAGCCTGTAAGGATAACCAATTCTCCACATCAGGTTGAGCAGAAGCTGGTATCTATGGATTGACTTCCTCCATGTTTTCGAACCCGAAGTCTATAGTTAACTGGTGGTCGGAGGATTTAACCGTCCTTAGAATTGATTTTTTCCAAAGGGTTCTGATTGCAATGATGGGAAGGGGATTCAAGCAGTATGCACTTGGACCAATATTAATGCTCTATGCACAGAAGTCTCTTCGTTGTTTG : GAAATATTTGGAAAGGGAAGGAAAAAGATTGAACCAAAACAAGAACATGAAAAAAGGGTTGTTGTAGAAACCATCGTTGGTCTTCTGCCAAGGGAGAAAAATGCATTATCCGTTAGCTTTTGTCAATGCTTCTCCGAGCTGCAATATATCTGCAGACCACGATGGCTGGCAGGCTCGACTTGGAGAAGAGGATGGATTGCAGCTTGGACAGGCTGTATTGGATGTATCTGTTAATTCCTTCATATTCCTTCAGAGGGGACACTTTGTTTGATGTTGAAATCATGCAGCTTATTGTGATGAATTTCCTTGCCTATGATATGGAGGAAAATCATTGGGAGATGAAGAGTATAATGAGTCTCATTCATTAAGAGACATGGAGCGAGTTGGGGAACTTATGGAAAATTACCTTGCTAAAATAGCTTCTGACCGTAATCTATCCATCACAAGCTT</gDNA_template>
            <first_frame> E  L  T  E  A  K  K  M  A  T  N  M  S  F  Y  C  L  L  H  *  E  I  V  *  G  K  T  N  E  H  G  *  G  P  *  K  T  R  S  P  M  V  D  D  M  L  I  L  I  M  N  N  L  L  L  *  T  V  C  P  L  K  R  S  F  F  S  L  L  Q  R  G  P  L  N   : G  F  S  P  R  R  S  Q  V  M  *  L  *  M  P  Q  E  S  P  L  H  Y  T  S :   S  H  *  F  Q  R  V  D  T  *  G  S  W  S  R  N  P  M  M  L  T  F  L  R  S  K  S  L  I  Y  L  V  E  E  R  H  L  N  L  Q  Q  S  F  V  M  E  *  I  L  R  *  A  Q  E  T  L  P  C  *  D  V  Q  Q  N  I  L  R  *  Q  K  T  M  Q  L  Q  I  W  W  E  E  L  R  T  T  L  V  K  *  E  L  R  A  F  I  V  L  L  Q  F  C  I  H  Q  K  I  L  F  P  F  Q  R  K  *  N  W  *  A  A  A  L  T  Q  L  H  I  *  P  V  R  I  T  N  S  P  H  Q  V  E  Q  K  L  V  S  M  D  *  L  P  P  C  F  R  T  R  S  L  *  L  T  G  G  R  R  I  *  P  S  L  E  L  I  F  S  K  G  F  *  L  Q  *  W  E  G  D  S  S  S  M  H  L  D  Q  Y  *  C  S  M  H  R  S  L  F  V  V  W :   K  Y  L  E  R  E  G  K  R  L  N  Q  N  K  N  M  K  K  G  L  L  *  K  P  S  L  V  F  C  Q  G  R  K  M  H  Y  P  L  A  F  V  N  A  S  P  S  C  N  I  S  A  D  H  D  G  W  Q  A  R  L  G  E  E  D  G  L  Q  L  G  Q  A  V  L  D  V  S  V  N  S  F  I  F  L  Q  R  G  H  F  V  *  C  *  N  H  A  A  Y  C  D  E  F  P  C  L  *  Y  G  G  K  S  L  G  D  E  E  Y  N  E  S  H  S  L  R  D  M  E  R  V  G  E  L  M  E  N  Y  L  A  K  I  A  S  D  R  N  L  S  I  T  S   </first_frame>
            <second_frame>  N  L  Q  K  Q  R  K  W  Q  Q  T  C  L  S  I  V  C  F  I  R  K  *  F  K  G  K  R  M  N  M  V  K  A  R  K  R  L  D  H  P  W  W  M  T  C  *  S  *  *  *  T  T  F  Y  S  K  Q  Y  V  H  *  K  G  A  S  F  L  C  Y  K  E  D  L  S  M  :  D  F  L  P  G  D  P  K  *  C  D  C  K  C  R  R  N  L  L  Y  T  T  Q   : V  P  I  S  F  K  E  W  I  H  K  E  V  G  L  G  I  Q  *  C  *  R  F  Y  D  R  N  P  *  Y  T  W  W  R  R  G  I  *  I  C  S  K  V  L  L  W  N  K  F  *  D  K  H  K  K  H  C  L  A  E  M  C  S  R  I  S  *  D  D  R  R  L  C  S  C  K  F  G  G  K  N  *  G  L  L  *  *  S  R  N  *  E  P  S  *  C  C  Y  N  F  A  F  I  R  K  S  Y  S  H  F  R  E  S  E  I  G  E  P  L  H  *  H  N  C  I  Y  S  L  *  G  *  P  I  L  H  I  R  L  S  R  S  W  Y  L  W  I  D  F  L  H  V  F  E  P  E  V  Y  S  *  L  V  V  G  G  F  N  R  P  *  N  *  F  F  P  K  G  S  D  C  N  D  G  K  G  I  Q  A  V  C  T  W  T  N  I  N  A  L  C  T  E  V  S  S  L  F   : G  N  I  W  K  G  K  E  K  D  *  T  K  T  R  T  *  K  K  G  C  C  R  N  H  R  W  S  S  A  K  G  E  K  C  I  I  R  *  L  L  S  M  L  L  R  A  A  I  Y  L  Q  T  T  M  A  G  R  L  D  L  E  K  R  M  D  C  S  L  D  R  L  Y  W  M  Y  L  L  I  P  S  Y  S  F  R  G  D  T  L  F  D  V  E  I  M  Q  L  I  V  M  N  F  L  A  Y  D  M  E  E  N  H  W  E  M  K  S  I  M  S  L  I  H  *  E  T  W  S  E  L  G  N  L  W  K  I  T  L  L  K  *  L  L  T  V  I  Y  P  S  Q  A  </second_frame>
            <third_frame>   T  Y  R  S  K  E  N  G  N  K  H  V  F  L  L  F  A  S  L  G  N  S  L  R  E  N  E  *  T  W  L  R  P  V  K  D  S  I  T  H  G  G  *  H  V  D  L  D  N  E  Q  P  S  T  L  N  S  M  S  T  K  K  E  L  L  F  S  A  T  K  R  T  S  Q  W :   I  F  S  Q  E  I  P  S  D  V  T  V  N  A  A  G  I  S  F  T  L  H  K  :  F  P  L  V  S  K  S  G  Y  I  R  K  L  V  S  E  S  N  D  A  D  V  S  T  I  E  I  P  D  I  P  G  G  G  E  A  F  E  F  A  A  K  F  C  Y  G  I  N  F  E  I  S  T  R  N  I  A  L  L  R  C  A  A  E  Y  L  E  M  T  E  D  Y  A  V  A  N  L  V  G  R  T  E  D  Y  F  S  E  V  G  I  E  S  L  H  S  A  V  T  I  L  H  S  S  E  N  L  I  P  I  S  E  K  V  K  L  V  S  R  C  I  D  T  I  A  Y  I  A  C  K  D  N  Q  F  S  T  S  G  *  A  E  A  G  I  Y  G  L  T  S  S  M  F  S  N  P  K  S  I  V  N  W  W  S  E  D  L  T  V  L  R  I  D  F  F  Q  R  V  L  I  A  M  M  G  R  G  F  K  Q  Y  A  L  G  P  I  L  M  L  Y  A  Q  K  S  L  R  C  L  :  E  I  F  G  K  G  R  K  K  I  E  P  K  Q  E  H  E  K  R  V  V  V  E  T  I  V  G  L  L  P  R  E  K  N  A  L  S  V  S  F  C  Q  C  F  S  E  L  Q  Y  I  C  R  P  R  W  L  A  G  S  T  W  R  R  G  W  I  A  A  W  T  G  C  I  G  C  I  C  *  F  L  H  I  P  S  E  G  T  L  C  L  M  L  K  S  C  S  L  L  *  *  I  S  L  P  M  I  W  R  K  I  I  G  R  *  R  V  *  *  V  S  F  I  K  R  H  G  A  S  W  G  T  Y  G  K  L  P  C  *  N  S  F  *  P  *  S  I  H  H  K  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C00HBa0203P08.2" strand="+"/>
                <serials PGL_serial="17" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="91217" stop="91311"/>
                    <exon start="91431" stop="91500"/>
                    <exon start="91880" stop="92293"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>576</number_coding_nucleotides>
                  <number_encoded_amino_acids>192</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>HVDLDNEQPSTLNSMSTKKELLFSATKRTSQWIFSQEIPSDVTVNAAGISFTLHKFPLVSKSGYIRKLVSESNDADVSTIEIPDIPGGGEAFEFAAKFCYGINFEISTRNIALLRCAAEYLEMTEDYAVANLVGRTEDYFSEVGIESLHSAVTILHSSENLIPISEKVKLVSRCIDTIAYIACKDNQFSTSG*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C00HBa0203P08.2" strand="+"/>
                <serials PGL_serial="17" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="92294" stop="92494"/>
                    <exon start="92576" stop="92809"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>432</number_coding_nucleotides>
                  <number_encoded_amino_acids>144</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>AEAGIYGLTSSMFSNPKSIVNWWSEDLTVLRIDFFQRVLIAMMGRGFKQYALGPILMLYAQKSLRCLEIFGKGRKKIEPKQEHEKRVVVETIVGLLPREKNALSVSFCQCFSELQYICRPRWLAGSTWRRGWIAAWTGCIGCIC*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 27 chains have been computed
$ 
$ memory statistics:
$ 38232 bytes spliced alignments in total
$ 19 spliced alignments have been stored
$ 2012 bytes was the average size of a spliced alignment
$ 25624 bytes predicted gene locations in total
$ 17 predicted gene locations have been stored
$ 1507 bytes was the average size of a predicted gene location
$ 0 megabytes was the average size of the backtrace matrix
$ 32 backtrace matrices have been allocated
$ 
$ date finished: 2009-04-02 20:11:11
-->
