SW perc perc perc query position in query matching repeat position in repeat score div. del. ins. sequence begin end (left) repeat class/family begin end (left) ID 522 20.1 2.1 1.4 C00HBa0105C09.2 1330 1470 (142154) C SONATA2 Unknown (31) 222 81 1 702 34.8 5.1 2.3 C00HBa0105C09.2 4872 5522 (138102) C Unknown00057 Unknown (849) 2777 2109 2 351 20.3 1.4 0.0 C00HBa0105C09.2 5868 5941 (137683) + SONATA1 Unknown 1 75 (168) 3 390 36.1 5.4 3.9 C00HBa0105C09.2 7059 7674 (135950) C Unknown00057 Unknown (327) 3299 2675 4 * 404 33.2 7.6 5.0 C00HBa0105C09.2 7645 8224 (135400) C Unknown00043 Unknown (476) 10848 10254 5 301 28.2 3.9 3.4 C00HBa0105C09.2 8230 8485 (135139) + SHALINE15_MT Unknown 1310 4519 (1853) 6 395 32.4 9.1 1.4 C00HBa0105C09.2 8498 8996 (134628) C Unknown00057 Unknown (1364) 9960 1827 7 257 14.7 0.0 0.0 C00HBa0105C09.2 11077 11151 (132473) + Gypsy00042 Gypsy 5918 5992 (1506) 8 * 288 7.2 1.4 0.0 C00HBa0105C09.2 11103 11171 (132453) + GYCUME1_LTR Unknown 388 457 (2189) 9 230 15.2 8.4 1.9 C00HBa0105C09.2 11172 11208 (132416) C Gypsy00178 Gypsy (2526) 6564 6452 10 659 26.3 0.9 2.2 C00HBa0105C09.2 13201 13429 (130195) + SONATA2 Unknown 1 226 (27) 11 713 23.8 1.1 2.6 C00HBa0105C09.2 13533 13722 (129902) + SINE_SO Unknown 2 188 (1) 12 359 26.1 1.7 0.9 C00HBa0105C09.2 14045 14160 (129464) C Copia00151 Copia (7935) 2826 2710 13 417 15.4 0.0 6.2 C00HBa0105C09.2 14330 14426 (129198) + Unknown00046 Unknown 407 497 (9547) 14 241 22.1 2.2 5.5 C00HBa0105C09.2 14989 15079 (128545) + Unknown00029 Unknown 3442 3529 (2180) 15 * 573 21.4 2.8 2.1 C00HBa0105C09.2 15001 15143 (128481) C Copia00153 Copia (1206) 6183 6040 16 501 25.8 3.5 2.9 C00HBa0105C09.2 15144 15171 (128453) + Gypsy00090 Gypsy 4918 5089 (483) 17 8369 13.5 5.1 2.8 C00HBa0105C09.2 16204 17745 (125879) + GYPSOL2_LTR Unknown 4 1580 (0) 18 1281 19.3 3.2 3.5 C00HBa0105C09.2 17964 18333 (125291) C Copia00089 Copia (9513) 1943 1575 19 381 20.2 8.9 6.9 C00HBa0105C09.2 18336 18537 (125087) C Gypsy00155 Gypsy (1468) 5181 4976 20 346 26.7 1.0 1.0 C00HBa0105C09.2 18617 18718 (124906) C Copia00089 Copia (10831) 625 524 21 300 27.4 6.6 5.9 C00HBa0105C09.2 18760 19030 (124594) + Unknown00020 Unknown 93 365 (4840) 22 * 359 29.9 5.6 2.3 C00HBa0105C09.2 18837 19052 (124572) C Unknown00040 Unknown (84) 4598 4376 23 1862 7.3 0.4 0.0 C00HBa0105C09.2 19983 20227 (123397) C Gypsy00048 Gypsy (7851) 604 359 24 * 30335 6.8 0.2 0.7 C00HBa0105C09.2 20211 24314 (119310) + Gypsy00010 Gypsy 4549 9556 (0) 25 759 22.7 3.3 7.0 C00HBa0105C09.2 26687 26956 (116668) + Copia00108 Copia 8 267 (7162) 26 236 9.3 2.2 4.4 C00HBa0105C09.2 27327 27371 (116253) + Copia00108 Copia 580 623 (6806) 27 870 34.2 1.1 2.6 C00HBa0105C09.2 27835 28455 (115169) + Copia00108 Copia 1098 1709 (5720) 26 7981 23.1 2.1 2.3 C00HBa0105C09.2 28698 31006 (112618) C Unknown00056 Unknown (2002) 3107 805 28 6208 23.6 5.9 4.3 C00HBa0105C09.2 31000 33439 (110185) C Gypsy00059 Gypsy (5431) 3030 553 29 * 1294 17.2 1.1 1.1 C00HBa0105C09.2 33217 33480 (110144) + Gypsy00156 Gypsy 856 1119 (4890) 30 * 5244 14.8 2.5 4.7 C00HBa0105C09.2 33471 34489 (109135) C Unknown00050 Unknown (771) 4860 3864 31 * 9507 17.2 1.4 0.7 C00HBa0105C09.2 33671 35457 (108167) + Unknown00031 Unknown 10 1809 (3302) 32 1485 23.5 2.3 3.0 C00HBa0105C09.2 35453 35922 (107702) C Unknown00012 Unknown (1761) 542 76 33 * 629 23.4 6.4 2.9 C00HBa0105C09.2 35658 35938 (107686) + Unknown00016 Unknown 1247 1537 (3444) 34 * 280 19.6 0.0 0.0 C00HBa0105C09.2 35905 35960 (107664) C Unknown00054 Unknown (677) 4814 4759 35 * 2368 16.9 4.1 2.5 C00HBa0105C09.2 36073 36638 (106986) C Unknown00054 Unknown (733) 4758 4184 35 * 21499 19.5 1.5 2.7 C00HBa0105C09.2 36630 41975 (101649) C Unknown00056 Unknown (1) 5490 1 36 2379 17.9 2.7 2.2 C00HBa0105C09.2 42102 42690 (100934) C Unknown00054 Unknown (735) 4756 4165 35 19605 22.8 2.0 2.0 C00HBa0105C09.2 43328 48605 (95019) + Copia00108 Copia 2133 7410 (19) 37 288 24.1 10.1 2.5 C00HBa0105C09.2 51663 51781 (91843) C Gypsy00196 Gypsy (4359) 343 216 38 287 22.8 2.4 6.0 C00HBa0105C09.2 51887 51970 (91654) C Gypsy00177 Gypsy (5934) 4371 4291 39 397 28.9 6.6 5.2 C00HBa0105C09.2 53231 53595 (90029) + Gypsy00002 Gypsy 2553 2922 (4079) 40 * 441 37.0 1.8 0.6 C00HBa0105C09.2 53364 53692 (89932) C Gypsy00126 Gypsy (8528) 4329 3997 41 314 23.8 7.3 0.8 C00HBa0105C09.2 53718 53840 (89784) + Unknown00038 Unknown 6947 7077 (2030) 42 * 1017 25.4 3.0 5.7 C00HBa0105C09.2 53749 54211 (89413) C Gypsy00177 Gypsy (2343) 4400 3070 43 229 30.6 3.5 4.0 C00HBa0105C09.2 55921 56121 (87503) C Gypsy00032 Gypsy (5041) 1669 1470 44 21301 20.6 2.8 2.1 C00HBa0105C09.2 56259 63804 (79820) + Gypsy00143 Gypsy 1 8191 (53) 45 7045 14.2 2.8 0.9 C00HBa0105C09.2 63806 65080 (78544) C Gypsy00018 Gypsy (6649) 1300 1 46 * 20222 15.8 2.3 2.3 C00HBa0105C09.2 63952 67878 (75746) + Gypsy00091 Gypsy 1 3926 (4621) 47 1477 14.0 0.8 0.0 C00HBa0105C09.2 67876 68110 (75514) C Gypsy00091 Gypsy (4145) 4402 4166 48 * 12501 16.4 1.1 0.6 C00HBa0105C09.2 68122 70307 (73317) + Gypsy00091 Gypsy 4405 6599 (1948) 47 11529 15.4 2.1 0.9 C00HBa0105C09.2 70304 72312 (71312) C Gypsy00018 Gypsy (5209) 2740 709 49 * 16030 16.0 1.0 2.8 C00HBa0105C09.2 71314 75121 (68503) + Gypsy00091 Gypsy 4 7690 (0) 50 6464 19.8 1.9 1.2 C00HBa0105C09.2 75126 76564 (67060) + Gypsy00143 Gypsy 5384 6831 (625) 51 2350 20.2 1.6 0.9 C00HBa0105C09.2 76553 77111 (66513) + Gypsy00149 Gypsy 4378 4940 (43) 52 * 258 34.7 3.3 2.0 C00HBa0105C09.2 78497 78646 (64978) + Gypsy00020 Gypsy 6081 6232 (10) 53 300 23.6 2.1 5.3 C00HBa0105C09.2 78776 78869 (64755) C Gypsy00177 Gypsy (5924) 4381 4291 54 4299 20.2 1.7 1.8 C00HBa0105C09.2 80434 81471 (62153) C Gypsy00180 Gypsy (2300) 11115 10079 55 585 20.0 6.2 3.3 C00HBa0105C09.2 81566 81771 (61853) + Gypsy00152 Gypsy 5314 5566 (212) 56 399 16.5 1.1 4.5 C00HBa0105C09.2 81699 81787 (61837) C Gypsy00063 Gypsy (3961) 6965 6880 57 * 323 17.6 2.7 1.3 C00HBa0105C09.2 81776 81850 (61774) C Gypsy00140 Gypsy (985) 6042 5967 58 * 2587 22.9 3.6 3.0 C00HBa0105C09.2 81914 83611 (60013) C Gypsy00180 Gypsy (963) 8889 5495 55 * 4140 20.0 7.0 4.5 C00HBa0105C09.2 83610 84784 (58840) C Gypsy00063 Gypsy (6119) 4807 3604 59 2415 13.1 10.1 1.7 C00HBa0105C09.2 84898 85362 (58262) + Gypsy00140 Gypsy 3433 3936 (3091) 60 * 2491 22.8 9.4 5.6 C00HBa0105C09.2 85350 86596 (57028) C Gypsy00210 Gypsy (6504) 1429 136 61 * 8024 23.5 4.6 4.1 C00HBa0105C09.2 85574 87425 (56199) + Gypsy00123 Gypsy 376 6676 (1001) 62 8652 18.2 1.2 2.9 C00HBa0105C09.2 87426 89265 (54359) + Unknown00031 Unknown 2 1809 (3302) 63 3853 18.2 2.0 5.3 C00HBa0105C09.2 89270 90214 (53410) + Gypsy00140 Gypsy 3930 4843 (2184) 60 * 5760 17.0 6.1 3.5 C00HBa0105C09.2 90207 91590 (52034) + Gypsy00140 Gypsy 5052 6471 (556) 60 * 8833 16.0 1.8 4.3 C00HBa0105C09.2 91186 93033 (50591) C Gypsy00152 Gypsy (202) 5576 3774 64 2057 19.7 3.4 0.5 C00HBa0105C09.2 92719 93156 (50468) + Gypsy00140 Gypsy 2 452 (6575) 65 * 12424 27.9 0.5 0.3 C00HBa0105C09.2 93150 96428 (47196) C Gypsy00003 Gypsy (4982) 3411 127 66 * 21889 16.8 1.5 3.8 C00HBa0105C09.2 93919 98228 (45396) + Gypsy00140 Gypsy 594 4806 (2221) 67 3623 13.8 5.0 2.4 C00HBa0105C09.2 98289 99032 (44592) + Gypsy00140 Gypsy 5052 5814 (1213) 67 309 28.4 3.5 4.4 C00HBa0105C09.2 100623 100825 (42799) + Gypsy00199 Gypsy 4923 5123 (596) 68 272 23.6 0.0 4.0 C00HBa0105C09.2 102053 102127 (41497) C Gypsy00177 Gypsy (5943) 4362 4291 69 356 25.8 1.3 4.4 C00HBa0105C09.2 102283 102440 (41184) + Copia00089 Copia 3681 3833 (7623) 70 286 22.0 3.4 0.0 C00HBa0105C09.2 102668 102726 (40898) C Gypsy00031 Gypsy (2099) 5170 5110 71 468 18.9 3.0 3.0 C00HBa0105C09.2 102781 102911 (40713) + Copia00183 Copia 13 143 (5444) 72 2770 20.9 2.1 1.2 C00HBa0105C09.2 103029 103748 (39876) + Copia00183 Copia 298 1023 (4564) 72 1309 27.8 7.7 5.0 C00HBa0105C09.2 103744 104754 (38870) C Gypsy00046 Gypsy (6324) 4747 3710 73 * 1871 24.2 6.3 2.3 C00HBa0105C09.2 104028 104759 (38865) + Gypsy00155 Gypsy 5122 5882 (767) 74 455 24.1 5.2 7.4 C00HBa0105C09.2 104778 105046 (38578) C Gypsy00046 Gypsy (7501) 3570 3308 73 2913 24.1 2.7 4.2 C00HBa0105C09.2 105577 106639 (36985) + Gypsy00155 Gypsy 109 1155 (5494) 75 8959 26.3 1.4 1.7 C00HBa0105C09.2 106659 110899 (32725) C Gypsy00077 Gypsy (1763) 4354 273 76 860 28.0 5.2 5.2 C00HBa0105C09.2 110686 111265 (32359) C Copia00089 Copia (8502) 2954 2375 77 * 778 28.2 10.2 6.1 C00HBa0105C09.2 111410 112183 (31441) C Copia00089 Copia (9457) 1999 1194 77 * 1380 23.2 3.0 1.9 C00HBa0105C09.2 111781 112206 (31418) + Unknown00029 Unknown 4693 5123 (586) 78 267 22.7 3.0 0.0 C00HBa0105C09.2 112219 112284 (31340) + Gypsy00038 Gypsy 6885 6952 (766) 79 1372 25.6 3.1 3.5 C00HBa0105C09.2 112313 112890 (30734) C Gypsy00077 Gypsy (149) 5964 5389 80 1037 24.0 5.2 8.6 C00HBa0105C09.2 112531 113031 (30593) C Copia00089 Copia (10441) 1015 532 77 * 438 19.6 2.0 1.0 C00HBa0105C09.2 112945 113042 (30582) + Gypsy00046 Gypsy 4649 4747 (6324) 81 * 429 29.5 2.7 2.2 C00HBa0105C09.2 113164 113385 (30239) C Unknown00040 Unknown (84) 4598 4376 82 289 26.9 2.1 0.0 C00HBa0105C09.2 115415 115507 (28117) + Unknown00034 Unknown 3923 4017 (5060) 83 723 24.0 1.8 6.9 C00HBa0105C09.2 116664 116940 (26684) + Copia00108 Copia 5 267 (7162) 84 1276 32.7 2.1 2.0 C00HBa0105C09.2 117816 118530 (25094) + Copia00073 Copia 571 1286 (5942) 85 6671 24.3 1.0 0.2 C00HBa0105C09.2 119574 121208 (22416) + Copia00073 Copia 2201 3847 (3381) 86 535 20.0 0.0 0.0 C00HBa0105C09.2 121508 121612 (22012) C Copia00073 Copia (3713) 3515 3411 87 * 10909 21.9 1.7 1.3 C00HBa0105C09.2 121597 124311 (19313) + Copia00108 Copia 4705 7429 (0) 88 660 22.7 2.4 6.9 C00HBa0105C09.2 124549 124794 (18830) + Copia00108 Copia 5 239 (7190) 89 245 25.8 16.4 1.6 C00HBa0105C09.2 128069 128190 (15434) C Gypsy00113 Gypsy (547) 6191 6052 90 355 18.2 3.2 7.4 C00HBa0105C09.2 128312 128406 (15218) C Gypsy00177 Gypsy (5924) 4381 4291 91 284 22.6 11.9 3.3 C00HBa0105C09.2 128377 128527 (15097) C Gypsy00177 Gypsy (6660) 3645 3482 91 * 312 28.7 2.1 4.9 C00HBa0105C09.2 128517 128659 (14965) + Copia00089 Copia 3676 3814 (7642) 92 618 28.6 11.0 1.9 C00HBa0105C09.2 128869 129205 (14419) C Gypsy00119 Gypsy (599) 6086 5442 93 669 26.3 11.0 1.7 C00HBa0105C09.2 128901 129136 (14488) + Gypsy00073 Gypsy 4726 4983 (7101) 94 348 33.1 0.7 0.7 C00HBa0105C09.2 129211 129353 (14271) + Gypsy00015 Gypsy 2429 2571 (3605) 95 324 28.3 1.3 3.3 C00HBa0105C09.2 129943 130092 (13532) + Copia00089 Copia 3678 3824 (7632) 96 337 25.0 4.2 2.8 C00HBa0105C09.2 130408 130551 (13073) + Copia00183 Copia 2 147 (5440) 97 1661 21.0 6.0 1.3 C00HBa0105C09.2 130684 131146 (12478) + Copia00183 Copia 313 797 (4790) 97 * 3362 14.3 2.0 6.3 C00HBa0105C09.2 131146 131861 (11763) + Copia00110 Copia 1727 2411 (11721) 98 * 31589 8.2 1.8 2.6 C00HBa0105C09.2 131621 136486 (7138) C Unknown00040 Unknown (1) 4681 1 99 3263 15.0 1.8 6.3 C00HBa0105C09.2 136351 137077 (6547) + Copia00110 Copia 1724 2417 (11715) 100 * 2318 11.8 0.3 1.9 C00HBa0105C09.2 136744 137122 (6502) + Unknown00020 Unknown 1 373 (4832) 101 * 2302 7.1 0.0 10.3 C00HBa0105C09.2 136831 137209 (6415) C Unknown00040 Unknown (2) 4680 4341 102 * 963 22.7 0.0 0.4 C00HBa0105C09.2 137203 137441 (6183) C Copia00144 Copia (480) 5983 5746 103 * 1718 26.9 4.1 3.1 C00HBa0105C09.2 137435 138449 (5175) + Gypsy00155 Gypsy 4838 5904 (745) 104 4864 25.1 2.2 4.0 C00HBa0105C09.2 139135 140841 (2783) + Gypsy00155 Gypsy 33 1708 (4941) 105 366 25.2 5.2 8.7 C00HBa0105C09.2 141130 141416 (2208) + Unknown00012 Unknown 2019 2295 (8) 106 371 19.7 7.5 5.6 C00HBa0105C09.2 141225 141385 (2239) C Unknown00016 Unknown (2984) 1997 1834 107 6681 20.9 2.2 2.7 C00HBa0105C09.2 141516 143612 (12) + Unknown00056 Unknown 5 5489 (2) 108