SW perc perc perc query position in query matching repeat position in repeat score div. del. ins. sequence begin end (left) repeat class/family begin end (left) ID 265 23.5 0.0 8.9 C00HBa0027O01.2 1948 2059 (120270) C Gypsy00154 Gypsy (2792) 6558 6457 1 1461 33.4 5.2 2.7 C00HBa0027O01.2 3075 4365 (117964) + Gypsy00050 Gypsy 3273 4595 (2439) 2 605 32.0 6.9 4.7 C00HBa0027O01.2 4780 5973 (116356) C Gypsy00065 Gypsy (5650) 6004 1 3 564 28.6 6.5 1.8 C00HBa0027O01.2 5593 6032 (116297) + Gypsy00039 Gypsy 4877 6183 (694) 4 * 233 25.4 2.8 0.0 C00HBa0027O01.2 6509 6579 (115750) C Copia00089 Copia (7887) 3569 3497 5 * 3901 20.8 2.3 1.9 C00HBa0027O01.2 6579 7588 (114741) C Unknown00052 Unknown (3655) 1014 1 6 * 4497 23.0 1.7 5.4 C00HBa0027O01.2 7585 9076 (113253) + Unknown00016 Unknown 1 1436 (3545) 7 556 16.2 0.0 1.9 C00HBa0027O01.2 9068 9174 (113155) C Unknown00002 Unknown (333) 9648 9544 8 * 3363 23.6 6.7 4.4 C00HBa0027O01.2 9178 10617 (111712) C Gypsy00177 Gypsy (3109) 7196 5724 9 298 28.1 1.0 1.0 C00HBa0027O01.2 10643 10746 (111583) C Gypsy00177 Gypsy (4769) 5536 5433 9 * 3195 20.6 4.2 1.0 C00HBa0027O01.2 10743 11453 (110876) + Unknown00019 Unknown 13579 14312 (321) 10 4094 6.9 0.8 4.1 C00HBa0027O01.2 11454 12041 (110288) + Gypsy00065 Gypsy 5931 6499 (270) 11 24610 12.4 7.5 1.2 C00HBa0027O01.2 12057 16145 (106184) C Gypsy00078 Gypsy (692) 7415 3070 12 1203 20.3 5.3 7.8 C00HBa0027O01.2 16155 16677 (105652) + Copia00149 Copia 8071 8580 (5903) 13 282 31.2 3.1 4.6 C00HBa0027O01.2 18916 19110 (103219) + Copia00149 Copia 5027 5218 (9265) 14 832 20.4 0.5 0.5 C00HBa0027O01.2 19224 19425 (102904) C Unknown00032 Unknown (267) 6804 6603 15 432 22.6 9.7 8.9 C00HBa0027O01.2 19454 19710 (102619) + Gypsy00049 Gypsy 2639 2897 (11633) 16 * 475 25.7 7.8 6.2 C00HBa0027O01.2 19541 19797 (102532) + Unknown00019 Unknown 5820 6080 (8553) 17 447 24.1 1.7 2.5 C00HBa0027O01.2 19878 19996 (102333) + Unknown00019 Unknown 7419 7536 (7097) 17 319 25.0 4.4 5.9 C00HBa0027O01.2 20218 20353 (101976) + Gypsy00049 Gypsy 3978 4111 (10419) 16 1148 33.1 3.6 2.9 C00HBa0027O01.2 20956 21620 (100709) + Gypsy00049 Gypsy 4748 5417 (9113) 18 1034 25.3 4.1 1.5 C00HBa0027O01.2 22202 22542 (99787) + Gypsy00049 Gypsy 11589 11938 (2592) 19 4335 20.3 4.6 8.0 C00HBa0027O01.2 24686 24696 (97633) + Copia00149 Copia 7354 7408 (7075) 20 4554 20.0 3.8 1.6 C00HBa0027O01.2 24697 25742 (96587) + Unknown00019 Unknown 13559 14627 (6) 21 4335 20.3 4.6 8.0 C00HBa0027O01.2 25743 25955 (96374) + Copia00149 Copia 7409 8565 (5918) 20 421 28.0 1.8 6.2 C00HBa0027O01.2 28131 28355 (93974) + Copia00149 Copia 10777 10991 (3492) 22 1137 15.6 4.4 7.6 C00HBa0027O01.2 28832 29198 (93131) + Copia00149 Copia 11583 11937 (2546) 23 * 1336 18.4 3.7 7.1 C00HBa0027O01.2 28909 29389 (92940) + Unknown00019 Unknown 3267 3731 (10902) 24 14541 24.3 1.9 2.8 C00HBa0027O01.2 29401 35083 (87246) + Gypsy00086 Gypsy 1520 6980 (503) 25 6518 16.3 3.1 3.5 C00HBa0027O01.2 36110 37716 (84613) + Gypsy00190 Gypsy 257 6194 (6663) 26 4281 20.6 2.6 2.1 C00HBa0027O01.2 37724 37827 (84502) C Copia00153 Copia (995) 6394 5440 27 4364 19.2 0.7 0.5 C00HBa0027O01.2 37828 38673 (83656) + Gypsy00187 Gypsy 4925 5772 (92) 28 2013 21.0 8.1 6.6 C00HBa0027O01.2 38772 39652 (82677) + Unknown00031 Unknown 4218 5111 (0) 29 * 11913 20.1 2.1 4.2 C00HBa0027O01.2 39134 42099 (80230) + Gypsy00123 Gypsy 348 3251 (4496) 30 * 37351 15.3 1.5 1.7 C00HBa0027O01.2 40251 49301 (73028) C Gypsy00003 Gypsy (3) 7829 1 31 10597 19.0 2.4 4.3 C00HBa0027O01.2 47978 50535 (71794) + Gypsy00123 Gypsy 370 2877 (4870) 32 * 306 24.4 5.5 3.9 C00HBa0027O01.2 52728 52855 (69474) + Copia00149 Copia 4829 4958 (9525) 33 5191 15.0 5.7 3.5 C00HBa0027O01.2 53151 54447 (67882) + Gypsy00046 Gypsy 156 2066 (9005) 34 3221 22.3 5.5 3.7 C00HBa0027O01.2 54451 55488 (66841) C GYPSOL2_LTR Unknown (3) 1577 521 35 * 4032 18.2 3.8 1.2 C00HBa0027O01.2 54747 55624 (66705) + Gypsy00056 Gypsy 1 900 (11250) 36 1276 18.7 5.9 0.7 C00HBa0027O01.2 55668 55937 (66392) + Gypsy00056 Gypsy 962 1245 (10905) 36 22276 19.5 2.8 3.0 C00HBa0027O01.2 55938 62623 (59706) + Gypsy00046 Gypsy 1402 10234 (837) 37 7808 19.5 2.9 2.4 C00HBa0027O01.2 62136 63904 (58425) C Unknown00025 Unknown (2223) 4085 2307 38 * 2264 24.3 0.9 2.7 C00HBa0027O01.2 63895 64529 (57800) + Gypsy00077 Gypsy 4245 4868 (1245) 39 * 11328 10.3 0.2 0.5 C00HBa0027O01.2 64529 66585 (55744) + Copia00153 Copia 4362 6497 (892) 40 6326 19.3 1.5 3.1 C00HBa0027O01.2 66590 69393 (52936) + Copia00089 Copia 137 2993 (8463) 41 2045 28.8 1.6 1.3 C00HBa0027O01.2 69401 70075 (52254) C Copia00211 Copia (2590) 1580 904 42 513 29.6 5.5 4.4 C00HBa0027O01.2 70263 70944 (51385) + Gypsy00063 Gypsy 2270 3416 (8068) 43 1565 24.5 8.2 7.9 C00HBa0027O01.2 71660 72755 (49574) C Copia00153 Copia (1929) 5460 4362 44 2190 25.6 1.4 0.0 C00HBa0027O01.2 72756 73309 (49020) C Copia00211 Copia (3262) 908 347 42 299 18.9 1.4 10.2 C00HBa0027O01.2 73500 73646 (48683) C Unknown00049 Unknown (6839) 2192 2059 45 1494 15.2 0.9 6.6 C00HBa0027O01.2 73725 74042 (48287) C Unknown00046 Unknown (9543) 501 202 46 422 23.5 0.7 0.7 C00HBa0027O01.2 74092 74228 (48101) C Unknown00049 Unknown (7177) 1854 1718 45 1540 22.2 0.6 0.6 C00HBa0027O01.2 74310 74648 (47681) C Copia00211 Copia (3829) 341 3 42 2000 12.9 0.3 0.3 C00HBa0027O01.2 76954 77272 (45057) C Copia00110 Copia (11412) 2720 2402 47 277 11.3 7.2 0.0 C00HBa0027O01.2 78689 78785 (43544) C STOWAWAY50_OS Unknown (5) 169 66 48 * 406 11.8 3.2 1.1 C00HBa0027O01.2 78726 78819 (43510) + HELITRON7_OS Unknown 1610 1705 (8448) 49 466 20.6 9.8 0.8 C00HBa0027O01.2 80501 80632 (41697) + Copia00183 Copia 13 156 (5431) 50 563 18.4 0.8 0.0 C00HBa0027O01.2 80844 80982 (41347) C Copia00110 Copia (11289) 2843 2715 51 * 1031 25.4 1.3 5.3 C00HBa0027O01.2 80939 81312 (41017) C Unknown00020 Unknown (4832) 373 15 52 958 25.2 5.1 0.6 C00HBa0027O01.2 85850 86165 (36164) + Copia00172 Copia 3515 3844 (2783) 53 2925 23.1 2.4 2.1 C00HBa0027O01.2 87798 88607 (33722) + Gypsy00086 Gypsy 250 1061 (6422) 54 724 23.5 3.3 4.0 C00HBa0027O01.2 88408 88888 (33441) C Gypsy00197 Gypsy (112) 8829 8303 55 * 1100 26.3 4.8 1.6 C00HBa0027O01.2 89058 89103 (33226) + Copia00110 Copia 2042 2365 (11767) 56 1215 23.4 1.6 7.5 C00HBa0027O01.2 89104 89487 (32842) + Unknown00020 Unknown 13 373 (4832) 57 1100 26.3 4.8 1.6 C00HBa0027O01.2 89488 89562 (32767) + Copia00110 Copia 2366 2897 (11235) 56 354 16.4 0.0 0.0 C00HBa0027O01.2 90867 90927 (31402) + Unknown00034 Unknown 5145 5205 (3872) 58 * 1681 20.8 4.1 4.4 C00HBa0027O01.2 90927 91504 (30825) C Gypsy00077 Gypsy (348) 5765 4976 59 * 5026 29.8 2.0 1.0 C00HBa0027O01.2 91491 91616 (30713) C Copia00211 Copia (885) 3285 3155 60 230 19.6 0.0 5.1 C00HBa0027O01.2 91617 91675 (30654) + COP20_I_MT Unknown 1134 1189 (2979) 61 5026 29.8 2.0 1.0 C00HBa0027O01.2 91676 93301 (29028) C Copia00211 Copia (1016) 3154 1459 60 545 15.3 2.3 1.5 C00HBa0027O01.2 93317 93449 (28880) C Gypsy00077 Gypsy (158) 5955 5822 62 927 23.5 7.6 6.8 C00HBa0027O01.2 94370 95132 (27197) + Gypsy00177 Gypsy 5157 6276 (1222) 63 229 23.2 0.0 0.0 C00HBa0027O01.2 95120 95188 (27141) + Gypsy00042 Gypsy 6569 6637 (861) 64 * 4168 22.8 2.8 2.3 C00HBa0027O01.2 95506 96616 (25713) + Gypsy00086 Gypsy 5 1120 (6363) 65 1098 22.4 5.6 5.8 C00HBa0027O01.2 96349 96864 (25465) C Gypsy00197 Gypsy (112) 8829 8315 66 * 5547 18.1 0.8 0.7 C00HBa0027O01.2 96867 97931 (24398) C Copia00153 Copia (1962) 5427 4362 67 * 27461 17.3 2.1 1.2 C00HBa0027O01.2 96975 102072 (20257) + Gypsy00181 Gypsy 7 5152 (1558) 68 7078 17.1 1.0 3.7 C00HBa0027O01.2 102077 103488 (18841) + Gypsy00187 Gypsy 4491 5864 (0) 69 * 10825 18.5 0.8 1.4 C00HBa0027O01.2 102324 104469 (17860) C Copia00153 Copia (892) 6497 4364 70 286 21.8 0.0 0.0 C00HBa0027O01.2 105234 105288 (17041) + Gypsy00174 Gypsy 774 828 (4454) 71 404 24.6 4.6 3.1 C00HBa0027O01.2 106363 106492 (15837) C Gypsy00073 Gypsy (60) 12024 11893 72 2849 12.0 4.7 1.6 C00HBa0027O01.2 110676 111190 (11139) C Copia00112 Copia (4151) 4736 4206 73 * 31225 11.5 3.6 3.1 C00HBa0027O01.2 110936 116118 (6211) + Copia00121 Copia 2 5209 (0) 74 2713 14.4 4.0 1.9 C00HBa0027O01.2 116017 116546 (5783) C Copia00112 Copia (3864) 5023 4483 75 * 251 9.4 0.0 0.0 C00HBa0027O01.2 118835 118866 (3463) + TS Unknown 60 91 (70) 76 755 11.2 0.9 0.0 C00HBa0027O01.2 120511 120626 (1703) C Unknown00034 Unknown (5255) 3822 3706 77 4460 22.1 4.8 5.2 C00HBa0027O01.2 120630 122286 (43) C Unknown00016 Unknown (3096) 1885 236 78