SW perc perc perc query position in query matching repeat position in repeat score div. del. ins. sequence begin end (left) repeat class/family begin end (left) ID 2503 19.8 1.7 2.0 C00HBa0255N21.1 5 596 (108390) C Unknown00045 Unknown (3929) 595 6 1 * 4268 24.1 3.6 2.6 C00HBa0255N21.1 361 1749 (107237) C Gypsy00033 Gypsy (4518) 6477 5075 2 7812 12.6 1.6 0.5 C00HBa0255N21.1 1780 3068 (105918) C Gypsy00018 Gypsy (6645) 1304 2 3 * 18231 13.8 2.1 1.7 C00HBa0255N21.1 1928 5138 (103848) + Gypsy00091 Gypsy 1 3222 (5325) 4 349 4.1 0.0 0.0 C00HBa0255N21.1 5955 6051 (102935) + TREP60 Unknown 64 160 (174) 5 266 26.5 5.7 4.1 C00HBa0255N21.1 6058 6179 (102807) + Gypsy00018 Gypsy 7472 7595 (354) 6 * 316 22.2 2.9 8.7 C00HBa0255N21.1 6085 6222 (102764) C Gypsy00026 Gypsy (6285) 458 329 7 1038 27.0 3.0 2.3 C00HBa0255N21.1 6840 7309 (101677) C Gypsy00177 Gypsy (5650) 4655 4183 8 429 22.7 10.3 4.3 C00HBa0255N21.1 7352 7604 (101382) + Gypsy00086 Gypsy 680 947 (6536) 9 * 444 23.9 9.5 6.7 C00HBa0255N21.1 7479 8002 (100984) C Gypsy00121 Gypsy (1024) 7302 6764 10 379 24.1 6.7 3.4 C00HBa0255N21.1 9116 9324 (99662) + Gypsy00042 Gypsy 724 7470 (28) 11 355 24.1 2.5 3.3 C00HBa0255N21.1 9396 9515 (99471) C Unknown00002 Unknown (644) 9337 9219 12 * 402 21.8 4.0 1.9 C00HBa0255N21.1 9410 9557 (99429) + Gypsy00042 Gypsy 218 1689 (6493) 13 777 26.1 7.1 6.0 C00HBa0255N21.1 9718 10068 (98918) C GYPSODE1_LTR Unknown (1561) 1402 1048 14 1452 29.9 2.9 1.4 C00HBa0255N21.1 10604 11122 (97864) C GYPSODE1_LTR Unknown (2343) 620 94 14 3164 25.8 4.8 4.8 C00HBa0255N21.1 11132 12754 (96232) C Gypsy00177 Gypsy (1129) 8394 6783 15 * 21096 18.5 1.9 3.0 C00HBa0255N21.1 12754 13110 (95876) + Gypsy00029 Gypsy 1 724 (9035) 16 12996 18.4 1.8 4.5 C00HBa0255N21.1 13111 16146 (92840) C Unknown00025 Unknown (1046) 5262 2310 17 21096 18.5 1.9 3.0 C00HBa0255N21.1 16147 19182 (89804) + Gypsy00029 Gypsy 725 6891 (2868) 16 2281 20.6 2.2 0.7 C00HBa0255N21.1 19173 19709 (89277) C Unknown00050 Unknown (5049) 582 38 18 * 5413 15.9 5.3 4.1 C00HBa0255N21.1 19859 21555 (87431) + Unknown00031 Unknown 3554 5111 (0) 19 4254 17.9 0.7 1.2 C00HBa0255N21.1 21434 22283 (86703) C Gypsy00114 Gypsy (7092) 850 5 20 * 5447 17.0 1.1 1.1 C00HBa0255N21.1 21627 22662 (86324) + Gypsy00063 Gypsy 6214 7249 (3677) 21 1560 20.8 1.4 5.2 C00HBa0255N21.1 22805 23246 (85740) C Gypsy00152 Gypsy (4253) 1525 1101 22 * 2091 23.0 2.8 3.6 C00HBa0255N21.1 23037 23709 (85277) + Unknown00031 Unknown 2875 3542 (1569) 23 * 2576 16.9 1.9 1.3 C00HBa0255N21.1 23196 23735 (85251) + Gypsy00112 Gypsy 4782 5324 (2356) 24 10107 19.2 4.0 3.8 C00HBa0255N21.1 23908 27944 (81042) + Unknown00037 Unknown 846 5111 (0) 25 6161 20.6 1.0 1.9 C00HBa0255N21.1 26828 28168 (80818) + Gypsy00112 Gypsy 1 1329 (6351) 26 * 1785 15.6 1.3 0.0 C00HBa0255N21.1 27924 28225 (80761) C Unknown00050 Unknown (4171) 1460 1155 27 * 1794 19.1 1.4 2.5 C00HBa0255N21.1 28450 28880 (80106) C Gypsy00152 Gypsy (4252) 1526 1101 28 * 2587 21.4 2.1 0.9 C00HBa0255N21.1 28823 29398 (79588) C Unknown00050 Unknown (5011) 620 38 27 788 23.6 8.5 9.0 C00HBa0255N21.1 29524 30113 (78873) C Gypsy00210 Gypsy (6583) 1350 764 29 * 5300 16.8 4.5 3.0 C00HBa0255N21.1 29585 31234 (77752) + Unknown00031 Unknown 3599 5111 (0) 30 4406 17.4 0.5 1.4 C00HBa0255N21.1 31120 31965 (77021) C Gypsy00114 Gypsy (7102) 840 3 31 * 6031 16.4 2.0 1.7 C00HBa0255N21.1 31305 32442 (76544) + Gypsy00063 Gypsy 6213 7354 (3572) 32 * 6190 18.6 2.0 1.0 C00HBa0255N21.1 31461 32697 (76289) + Unknown00037 Unknown 1152 2401 (2438) 33 5700 17.7 1.9 3.8 C00HBa0255N21.1 32698 33925 (75061) + GYPSOL2_LTR Unknown 4 1208 (372) 34 * 21624 21.4 4.3 3.6 C00HBa0255N21.1 33922 46049 (62937) C Gypsy00190 Gypsy (1) 12381 1553 35 6184 18.7 1.1 1.6 C00HBa0255N21.1 46037 47257 (61729) + Gypsy00112 Gypsy 116 1329 (6351) 36 * 1887 15.7 0.6 0.0 C00HBa0255N21.1 47013 47325 (61661) C Unknown00050 Unknown (4171) 1460 1146 37 * 261 32.1 3.6 3.6 C00HBa0255N21.1 47380 47547 (61439) C Gypsy00059 Gypsy (2174) 6287 6120 38 * 1820 19.6 1.5 4.3 C00HBa0255N21.1 47543 48006 (60980) C Gypsy00152 Gypsy (4253) 1525 1075 39 * 1845 20.7 2.6 4.5 C00HBa0255N21.1 47764 48253 (60733) + Unknown00031 Unknown 2871 3351 (1760) 40 1275 16.2 0.4 0.4 C00HBa0255N21.1 48251 48479 (60507) C Gypsy00114 Gypsy (352) 7590 7362 41 * 23048 15.6 1.6 1.1 C00HBa0255N21.1 48479 52630 (56356) + Gypsy00046 Gypsy 6892 11065 (6) 42 13630 16.8 3.6 3.7 C00HBa0255N21.1 51072 54024 (54962) C Unknown00025 Unknown (1046) 5262 2312 43 * 1150 23.7 2.3 2.3 C00HBa0255N21.1 54026 54514 (54472) C Gypsy00038 Gypsy (1313) 6405 373 44 * 1161 22.5 2.3 3.7 C00HBa0255N21.1 54510 54860 (54126) C Gypsy00038 Gypsy (1817) 5901 5556 45 994 25.6 3.8 3.2 C00HBa0255N21.1 54527 54926 (54060) + Gypsy00080 Gypsy 5364 5765 (4181) 46 * 1106 9.5 5.4 0.0 C00HBa0255N21.1 61190 61357 (47629) + HarbN_I Unknown 29 205 (0) 47 526 16.4 12.0 1.4 C00HBa0255N21.1 62564 62705 (46281) C Copia00172 Copia (5128) 1499 1343 48 776 22.1 0.9 3.7 C00HBa0255N21.1 63095 63310 (45676) C Copia00172 Copia (5281) 1346 1137 48 1162 18.0 7.1 2.3 C00HBa0255N21.1 64699 65051 (43935) + Gypsy00073 Gypsy 1 370 (11714) 49 5556 22.9 4.3 4.8 C00HBa0255N21.1 65560 68674 (40312) C Gypsy00177 Gypsy (1899) 8406 4965 50 397 7.5 0.0 0.0 C00HBa0255N21.1 68776 68842 (40144) + Gypsy00042 Gypsy 5982 6048 (1450) 51 * 620 11.7 0.5 13.3 C00HBa0255N21.1 68842 69029 (39957) + Copia00172 Copia 1702 1865 (4762) 52 362 21.2 4.0 9.6 C00HBa0255N21.1 69037 69213 (39773) + Copia00110 Copia 2724 2890 (11242) 53 1005 30.9 5.1 2.2 C00HBa0255N21.1 69319 69851 (39135) C Gypsy00127 Gypsy (4378) 2169 1622 54 243 28.9 14.3 1.2 C00HBa0255N21.1 70470 70553 (38433) C Gypsy00172 Gypsy (5404) 509 415 55 16637 8.6 1.2 0.5 C00HBa0255N21.1 70698 72989 (35997) + Gypsy00125 Gypsy 7216 9524 (556) 56 * 49838 10.2 1.7 2.0 C00HBa0255N21.1 71991 82122 (26864) C Gypsy00010 Gypsy (0) 14091 1 57 343 24.2 2.9 8.8 C00HBa0255N21.1 82803 83006 (25980) C Gypsy00177 Gypsy (5719) 4586 4395 58 885 28.7 2.0 5.7 C00HBa0255N21.1 83617 84126 (24860) C Unknown00056 Unknown (2002) 3107 2617 59 244 25.6 5.2 6.2 C00HBa0255N21.1 84050 84145 (24841) + Gypsy00198 Gypsy 5589 5683 (2561) 60 * 1555 26.6 4.5 2.9 C00HBa0255N21.1 84161 84775 (24211) C Unknown00002 Unknown (2182) 7799 7175 61 355 26.6 3.6 1.5 C00HBa0255N21.1 84794 84988 (23998) C Unknown00002 Unknown (2785) 7196 6998 61 3133 17.9 1.8 2.0 C00HBa0255N21.1 85893 86696 (22290) C Unknown00002 Unknown (2997) 6984 6076 61 698 19.3 1.7 3.5 C00HBa0255N21.1 86614 86785 (22201) C Gypsy00046 Gypsy (288) 10783 10615 62 * 630 26.4 6.2 7.1 C00HBa0255N21.1 86640 87087 (21899) + Gypsy00198 Gypsy 7041 7484 (760) 63 * 2757 21.7 4.5 2.2 C00HBa0255N21.1 86839 87598 (21388) C Unknown00002 Unknown (4008) 5973 5197 61 * 11061 17.7 2.9 2.6 C00HBa0255N21.1 87583 90294 (18692) + Gypsy00033 Gypsy 5052 7671 (3324) 64 2747 18.1 1.9 2.3 C00HBa0255N21.1 90275 90924 (18062) + Unknown00045 Unknown 1403 2049 (2475) 65 * 3536 17.3 2.3 3.0 C00HBa0255N21.1 90913 91745 (17241) C Unknown00002 Unknown (4773) 5208 4382 61 942 26.1 4.0 1.3 C00HBa0255N21.1 92070 92372 (16614) C Gypsy00071 Gypsy (11314) 1397 1087 66 * 1456 28.8 2.3 0.8 C00HBa0255N21.1 92371 92840 (16146) C Gypsy00071 Gypsy (12195) 516 40 66 419 24.5 4.3 4.9 C00HBa0255N21.1 93191 93353 (15633) C Copia00089 Copia (7635) 3821 3660 67 5784 18.4 3.0 1.0 C00HBa0255N21.1 93544 94749 (14237) + Gypsy00003 Gypsy 5074 6303 (2090) 68 5144 19.6 5.3 4.5 C00HBa0255N21.1 94740 97569 (11417) C Gypsy00063 Gypsy (526) 7154 4824 69 428 27.5 7.1 1.1 C00HBa0255N21.1 99784 99967 (9019) C Gypsy00127 Gypsy (2808) 3739 3545 70 5549 21.4 2.8 1.8 C00HBa0255N21.1 99971 101344 (7642) C Gypsy00056 Gypsy (9802) 2348 962 71 251 29.0 0.0 0.0 C00HBa0255N21.1 101418 101479 (7507) + Gypsy00181 Gypsy 6048 6109 (601) 72 * 1097 24.6 4.6 5.5 C00HBa0255N21.1 101435 101872 (7114) C Gypsy00056 Gypsy (11195) 955 522 71 7783 19.4 1.5 2.0 C00HBa0255N21.1 101890 103668 (5318) C Gypsy00059 Gypsy (6691) 1770 1 73 * 8891 21.4 2.3 5.6 C00HBa0255N21.1 102291 104885 (4101) + Gypsy00123 Gypsy 385 2892 (4855) 74 * 8986 17.2 1.0 2.6 C00HBa0255N21.1 103043 104891 (4095) + Unknown00031 Unknown 2 1819 (3292) 75 1764 31.0 2.4 3.5 C00HBa0255N21.1 105258 106116 (2870) + Gypsy00155 Gypsy 2712 3561 (3088) 76 807 30.9 2.1 1.4 C00HBa0255N21.1 107342 107630 (1356) C Gypsy00191 Gypsy (2468) 1780 1490 77 1048 21.1 2.7 4.4 C00HBa0255N21.1 108686 108982 (4) + Unknown00002 Unknown 9180 9471 (510) 78