psLayout version 3 match mis- rep. N's Q gap Q gap T gap T gap strand Q Q Q Q T T T T block blockSizes qStarts tStarts match match count bases count bases name size start end name size start end count --------------------------------------------------------------------------------------------------------------------------------------------------------------- 40 0 0 0 1 1 1 10 + SGN-E747703 1222 1106 1147 C02HBa0155C04.3 118312 89787 89837 3 8,27,5, 1106,1114,1142, 89787,89805,89832, 1110 13 0 0 1 12 9 4142 - SGN-E746341 1156 0 1135 C02HBa0155C04.3 118312 72979 78244 11 139,184,72,78,113,111,114,79,54,22,157, 21,160,344,416,494,607,718,832,911,977,999, 72979,73119,73409,73574,74970,76463,76942,77219,78008,78062,78087, 43 0 0 0 0 0 0 0 - SGN-E746341 1156 244 287 C02HBa0155C04.3 118312 77507 77550 1 43, 869, 77507, 609 0 0 0 0 0 2 3119 + SGN-E688382 613 4 613 C02HBa0155C04.3 118312 49810 53538 3 377,122,110, 4,381,503, 49810,53202,53428, 31 1 0 0 0 0 0 0 - SGN-E689139 512 410 442 C02HBa0155C04.3 118312 10217 10249 1 32, 70, 10217, 39 3 0 0 0 0 0 0 + SGN-E205081 411 340 382 C02HBa0155C04.3 118312 103117 103159 1 42, 340, 103117, 504 1 0 0 0 0 2 3119 + SGN-E202595 505 0 505 C02HBa0155C04.3 118312 49812 53436 3 375,122,8, 0,375,497, 49812,53202,53428, 35 0 0 0 0 0 0 0 - SGN-E209194 380 25 60 C02HBa0155C04.3 118312 99123 99158 1 35, 320, 99123, 35 0 0 0 0 0 0 0 - SGN-E200836 500 131 166 C02HBa0155C04.3 118312 99121 99156 1 35, 334, 99121, 710 1 0 1 0 0 3 3616 + SGN-E214745 712 0 712 C02HBa0155C04.3 118312 49868 54196 4 319,122,196,75, 0,319,441,637, 49868,53202,53428,54121, 53 0 0 0 0 0 3 98770 - SGN-E556125 782 381 434 C02HBa0155C04.3 118312 10220 109043 4 22,3,12,16, 348,370,373,385, 10220,15127,108954,109027, 40 1 0 0 0 0 0 0 - SGN-E369471 766 14 55 C02HBa0155C04.3 118312 99115 99156 1 41, 711, 99115, 40 1 0 0 0 0 0 0 - SGN-E369472 712 388 429 C02HBa0155C04.3 118312 99115 99156 1 41, 283, 99115, 40 1 0 0 0 0 0 0 - SGN-E369090 662 388 429 C02HBa0155C04.3 118312 99115 99156 1 41, 233, 99115, 32 1 0 0 0 0 0 0 + SGN-E374116 649 527 560 C02HBa0155C04.3 118312 99121 99154 1 33, 527, 99121, 31 1 0 0 0 0 0 0 + SGN-E374378 673 443 475 C02HBa0155C04.3 118312 30180 30212 1 32, 443, 30180, 36 1 0 0 0 0 1 2 - SGN-E377099 693 312 349 C02HBa0155C04.3 118312 99114 99153 2 5,32, 344,349, 99114,99121, 645 0 0 0 1 1 1 1 + SGN-E389689 646 0 646 C02HBa0155C04.3 118312 48381 49027 3 27,4,614, 0,27,32, 48381,48409,48413, 679 3 0 0 1 1 1 1 + SGN-E389948 683 0 683 C02HBa0155C04.3 118312 48381 49064 3 634,4,44, 0,635,639, 48381,49015,49020, 31 1 0 0 0 0 0 0 - SGN-E390420 258 204 236 C02HBa0155C04.3 118312 10217 10249 1 32, 22, 10217, 32 1 0 0 0 0 0 0 - SGN-E537745 523 435 468 C02HBa0155C04.3 118312 10217 10250 1 33, 55, 10217, 40 0 0 0 1 1 1 10 + SGN-E539470 799 676 717 C02HBa0155C04.3 118312 89787 89837 3 8,27,5, 676,684,712, 89787,89805,89832, 63 2 0 0 1 10 2 98856 - SGN-E539841 705 615 690 C02HBa0155C04.3 118312 10217 109138 3 23,31,11, 15,38,79, 10217,108887,109127, 33 1 0 0 0 0 0 0 - SGN-E541424 517 443 477 C02HBa0155C04.3 118312 99126 99160 1 34, 40, 99126, 36 0 0 0 0 0 0 0 + SGN-E543727 758 628 664 C02HBa0155C04.3 118312 99120 99156 1 36, 628, 99120, 49 3 0 0 0 0 0 0 - SGN-E544322 790 310 362 C02HBa0155C04.3 118312 56417 56469 1 52, 428, 56417, 782 12 0 0 1 12 7 4035 - SGN-E546059 806 0 806 C02HBa0155C04.3 118312 73415 78244 9 66,78,113,111,114,79,44,32,157, 0,66,144,257,368,482,561,617,649, 73415,73574,74970,76463,76942,77219,78008,78052,78087, 41 2 0 0 0 0 0 0 - SGN-E546059 806 244 287 C02HBa0155C04.3 118312 77507 77550 1 43, 519, 77507, 49 0 0 0 1 9 2 98653 - SGN-E546707 560 488 546 C02HBa0155C04.3 118312 10217 108919 3 20,22,7, 14,34,65, 10217,108887,108912, 655 1 0 0 0 0 0 0 + SGN-E550379 656 0 656 C02HBa0155C04.3 118312 48381 49037 1 656, 0, 48381, 609 0 0 0 0 0 2 3119 + SGN-E551507 613 4 613 C02HBa0155C04.3 118312 49810 53538 3 377,122,110, 4,381,503, 49810,53202,53428, 484 0 0 0 0 0 0 0 + SGN-E242003 484 0 484 C02HBa0155C04.3 118312 54561 55045 1 484, 0, 54561, 535 0 0 0 0 0 0 0 + SGN-E233057 535 0 535 C02HBa0155C04.3 118312 48382 48917 1 535, 0, 48382, 612 1 0 0 2 148 3 1356 - SGN-E728361 800 4 765 C02HBa0155C04.3 118312 1182 3151 4 31,515,18,49, 35,66,659,747, 1182,2128,2733,3102, 827 0 0 0 0 0 2 404 + SGN-E728471 827 0 827 C02HBa0155C04.3 118312 103060 104291 3 145,323,359, 0,145,468, 103060,103535,103932, 39 3 0 0 0 0 0 0 + SGN-E729632 894 50 92 C02HBa0155C04.3 118312 103117 103159 1 42, 50, 103117, 767 1 0 0 0 0 3 976 - SGN-E729956 768 0 768 C02HBa0155C04.3 118312 57102 58846 4 207,201,104,256, 0,207,408,512, 57102,57686,58380,58590, 46 0 0 0 1 3 3 112 - SGN-E718982 728 626 675 C02HBa0155C04.3 118312 108887 109045 4 15,7,7,17, 53,71,78,85, 108887,108913,108954,109028, 778 1 0 0 0 0 6 3428 - SGN-E698231 779 0 779 C02HBa0155C04.3 118312 73092 77299 7 211,72,78,113,111,114,80, 0,211,283,361,474,585,699, 73092,73409,73574,74970,76463,76942,77219, 43 0 0 0 0 0 0 0 - SGN-E698231 779 0 43 C02HBa0155C04.3 118312 77507 77550 1 43, 736, 77507, 480 7 0 0 1 9 5 3331 - SGN-E700064 502 6 502 C02HBa0155C04.3 118312 73472 77290 6 9,78,104,111,114,71, 0,9,96,200,311,425, 73472,73574,74979,76463,76942,77219, 34 0 0 0 0 0 0 0 - SGN-E700064 502 6 40 C02HBa0155C04.3 118312 77507 77541 1 34, 462, 77507, 895 0 0 0 0 0 6 3428 - SGN-E701719 913 2 897 C02HBa0155C04.3 118312 72976 77299 7 327,72,78,113,111,114,80, 16,343,415,493,606,717,831, 72976,73409,73574,74970,76463,76942,77219, 43 0 0 0 0 0 0 0 - SGN-E701719 913 2 45 C02HBa0155C04.3 118312 77507 77550 1 43, 868, 77507, 861 0 0 0 0 0 1 330 + SGN-E702836 861 0 861 C02HBa0155C04.3 118312 102665 103856 2 540,321, 0,540, 102665,103535, 885 0 0 0 0 0 1 330 + SGN-E702879 885 0 885 C02HBa0155C04.3 118312 102665 103880 2 540,345, 0,540, 102665,103535, 863 0 0 0 1 1 3 450 + SGN-E706637 864 0 864 C02HBa0155C04.3 118312 102261 103574 5 178,647,17,6,15, 0,178,825,843,849, 102261,102558,103535,103552,103559, 57 0 0 0 1 208 1 88879 - SGN-E713464 591 264 529 C02HBa0155C04.3 118312 10217 99153 2 25,32, 62,295, 10217,99121, 856 0 0 0 0 0 6 3428 - SGN-E714239 856 0 856 C02HBa0155C04.3 118312 73011 77295 7 292,72,78,113,111,114,76, 0,292,364,442,555,666,780, 73011,73409,73574,74970,76463,76942,77219, 39 0 0 0 0 0 0 0 - SGN-E714239 856 0 39 C02HBa0155C04.3 118312 77507 77546 1 39, 817, 77507, 35 0 0 0 0 0 1 11 + SGN-E244201 560 292 327 C02HBa0155C04.3 118312 89788 89834 2 8,27, 292,300, 89788,89807, 37 0 0 0 0 0 0 0 - SGN-E243117 580 478 515 C02HBa0155C04.3 118312 99122 99159 1 37, 65, 99122, 62 0 0 0 0 0 2 38840 - SGN-E249270 559 10 72 C02HBa0155C04.3 118312 30188 69090 3 24,15,23, 487,511,526, 30188,64035,69067, 330 2 0 0 0 0 0 0 - SGN-E224085 349 0 332 C02HBa0155C04.3 118312 72921 73253 1 332, 17, 72921, 35 1 0 0 0 0 0 0 - SGN-E217873 252 52 88 C02HBa0155C04.3 118312 99122 99158 1 36, 164, 99122, 50 1 0 0 1 99 3 179 + SGN-E278542 309 0 150 C02HBa0155C04.3 118312 108887 109117 4 14,14,5,18, 0,14,28,132, 108887,109027,109043,109099, 32 0 0 0 0 0 0 0 + SGN-E274651 660 595 627 C02HBa0155C04.3 118312 99125 99157 1 32, 595, 99125, 35 0 0 0 0 0 1 11 + SGN-E274651 660 592 627 C02HBa0155C04.3 118312 89787 89833 2 9,26, 592,601, 89787,89807, 43 1 0 0 0 0 1 5 + SGN-E276199 500 79 123 C02HBa0155C04.3 118312 99122 99171 2 35,9, 79,114, 99122,99162, 33 0 0 0 0 0 1 1 - SGN-E277474 523 149 182 C02HBa0155C04.3 118312 99121 99155 2 29,4, 341,370, 99121,99151, 491 1 0 0 0 0 3 1517 - SGN-E279763 492 0 492 C02HBa0155C04.3 118312 73039 75048 4 264,72,78,78, 0,264,336,414, 73039,73409,73574,74970, 33 1 0 0 0 0 0 0 - SGN-E297739 515 443 477 C02HBa0155C04.3 118312 99126 99160 1 34, 38, 99126, 499 1 0 0 0 0 4 1518 - SGN-E305224 501 1 501 C02HBa0155C04.3 118312 73068 75086 5 50,184,72,78,116, 0,50,234,306,384, 73068,73119,73409,73574,74970, 38 0 0 0 0 0 0 0 - SGN-E326023 496 119 157 C02HBa0155C04.3 118312 99118 99156 1 38, 339, 99118, 38 0 0 0 0 0 0 0 - SGN-E329888 584 107 145 C02HBa0155C04.3 118312 99118 99156 1 38, 439, 99118, 38 0 0 0 0 0 0 0 - SGN-E331093 512 135 173 C02HBa0155C04.3 118312 99118 99156 1 38, 339, 99118, 526 0 0 0 0 0 2 3119 + SGN-E331673 526 0 526 C02HBa0155C04.3 118312 49798 53443 3 389,122,15, 0,389,511, 49798,53202,53428, 479 1 0 0 0 0 2 3119 + SGN-E313390 483 3 483 C02HBa0155C04.3 118312 50005 53604 3 182,122,176, 3,185,307, 50005,53202,53428, 616 0 0 1 0 0 3 3616 + SGN-E313300 617 0 617 C02HBa0155C04.3 118312 49967 54200 4 220,122,196,79, 0,220,342,538, 49967,53202,53428,54121, 568 2 0 0 0 0 3 3616 + SGN-E313301 570 0 570 C02HBa0155C04.3 118312 50005 54191 4 182,122,196,70, 0,182,304,500, 50005,53202,53428,54121, 58 0 0 0 0 0 0 0 - SGN-E312828 558 141 199 C02HBa0155C04.3 118312 9067 9125 1 58, 359, 9067, 35 0 0 0 0 0 0 0 - SGN-E338444 538 110 145 C02HBa0155C04.3 118312 99121 99156 1 35, 393, 99121, 554 8 0 0 0 0 8 3094 - SGN-E339532 562 0 562 C02HBa0155C04.3 118312 94280 97936 9 35,81,72,72,105,51,35,45,66, 0,35,116,188,260,365,416,451,496, 94280,94399,94642,94870,95031,96018,96249,97734,97870, 640 11 0 0 0 0 10 3551 - SGN-E344320 651 0 651 C02HBa0155C04.3 118312 93728 97930 11 32,62,36,81,72,72,105,51,35,45,60, 0,32,94,130,211,283,355,460,511,546,591, 93728,94119,94279,94399,94642,94870,95031,96018,96249,97734,97870, 35 0 0 0 0 0 0 0 + SGN-E341896 724 599 634 C02HBa0155C04.3 118312 99121 99156 1 35, 599, 99121, 718 1 0 0 1 1 3 1517 - SGN-E352757 720 0 720 C02HBa0155C04.3 118312 72785 75021 5 44,474,72,78,51, 0,45,519,591,669, 72785,72829,73409,73574,74970, 36 0 0 0 0 0 0 0 + SGN-E349972 832 796 832 C02HBa0155C04.3 118312 99121 99157 1 36, 796, 99121, 36 0 0 0 0 0 0 0 - SGN-E349972 832 796 832 C02HBa0155C04.3 118312 99121 99157 1 36, 0, 99121, 618 5 0 0 0 0 6 948 - SGN-E351254 632 0 623 C02HBa0155C04.3 118312 93468 95039 7 292,62,36,81,72,72,8, 9,301,363,399,480,552,624, 93468,94119,94279,94399,94642,94870,95031, 40 0 0 0 1 1 1 10 + SGN-E351307 368 236 277 C02HBa0155C04.3 118312 89787 89837 3 8,27,5, 236,244,272, 89787,89805,89832, 477 9 0 0 1 1 7 2701 - SGN-E365634 495 8 495 C02HBa0155C04.3 118312 94873 98060 9 69,105,51,35,45,85,74,9,13, 0,69,174,225,260,305,391,465,474, 94873,95031,96018,96249,97734,97870,97955,98031,98047, 142 5 0 0 1 5 2 711 - SGN-E364678 168 16 168 C02HBa0155C04.3 118312 77227 78085 3 71,64,12, 0,71,140, 77227,78008,78073, 42 1 0 0 0 0 0 0 - SGN-E364678 168 96 139 C02HBa0155C04.3 118312 77507 77550 1 43, 29, 77507, 598 3 0 0 1 12 5 2624 - SGN-E357176 613 0 613 C02HBa0155C04.3 118312 75018 78243 7 65,111,114,79,54,22,156, 0,65,176,290,369,435,457, 75018,76463,76942,77219,78008,78062,78087, 43 0 0 0 0 0 0 0 - SGN-E357176 613 243 286 C02HBa0155C04.3 118312 77507 77550 1 43, 327, 77507,